Query 013004
Match_columns 451
No_of_seqs 512 out of 3092
Neff 9.1
Searched_HMMs 46136
Date Fri Mar 29 08:33:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013004.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/013004hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 5.2E-46 1.1E-50 414.1 27.5 358 56-445 449-825 (968)
2 KOG1187 Serine/threonine prote 100.0 4.1E-36 8.8E-41 295.2 17.0 160 285-447 61-221 (361)
3 KOG0595 Serine/threonine-prote 100.0 5.7E-30 1.2E-34 241.8 14.0 143 298-447 9-159 (429)
4 KOG0192 Tyrosine kinase specif 100.0 5.6E-28 1.2E-32 236.2 14.1 141 302-447 44-188 (362)
5 KOG0615 Serine/threonine prote 100.0 4.2E-28 9.2E-33 229.0 11.5 143 298-447 171-323 (475)
6 KOG0581 Mitogen-activated prot 99.9 7.8E-28 1.7E-32 225.4 12.7 141 300-447 80-223 (364)
7 KOG3653 Transforming growth fa 99.9 2.8E-27 6E-32 227.0 15.6 138 300-447 211-360 (534)
8 KOG0598 Ribosomal protein S6 k 99.9 6.2E-28 1.3E-32 226.1 10.8 144 297-447 23-169 (357)
9 KOG0600 Cdc2-related protein k 99.9 2E-27 4.4E-32 229.6 11.5 143 298-447 116-262 (560)
10 KOG0575 Polo-like serine/threo 99.9 4.1E-27 8.8E-32 232.8 13.5 142 299-447 18-162 (592)
11 KOG0197 Tyrosine kinases [Sign 99.9 1.8E-27 3.8E-32 232.8 9.8 140 301-447 208-347 (468)
12 KOG0659 Cdk activating kinase 99.9 9.1E-27 2E-31 208.6 10.6 142 299-447 2-145 (318)
13 KOG0605 NDR and related serine 99.9 3.2E-26 7E-31 223.1 13.0 146 295-447 137-285 (550)
14 KOG0611 Predicted serine/threo 99.9 6.6E-27 1.4E-31 220.0 7.8 141 300-447 54-197 (668)
15 KOG0593 Predicted protein kina 99.9 8.4E-27 1.8E-31 212.2 8.1 142 299-447 2-145 (396)
16 KOG1026 Nerve growth factor re 99.9 1.8E-26 3.9E-31 236.4 10.5 148 297-447 484-647 (774)
17 KOG0592 3-phosphoinositide-dep 99.9 2E-26 4.4E-31 224.4 10.2 145 296-447 70-218 (604)
18 KOG0616 cAMP-dependent protein 99.9 6.7E-26 1.4E-30 205.9 10.7 143 298-447 43-188 (355)
19 KOG0580 Serine/threonine prote 99.9 2.7E-26 5.8E-31 202.7 7.2 146 297-447 20-168 (281)
20 KOG0196 Tyrosine kinase, EPH ( 99.9 3E-26 6.6E-31 230.9 8.3 140 302-447 632-775 (996)
21 KOG0194 Protein tyrosine kinas 99.9 5.4E-26 1.2E-30 225.6 9.6 147 295-447 153-306 (474)
22 KOG0582 Ste20-like serine/thre 99.9 2.4E-25 5.1E-30 212.4 12.9 146 297-447 24-170 (516)
23 KOG0663 Protein kinase PITSLRE 99.9 8.6E-26 1.9E-30 208.2 9.5 143 298-447 75-221 (419)
24 KOG0585 Ca2+/calmodulin-depend 99.9 2.5E-25 5.5E-30 213.5 12.3 145 296-447 94-254 (576)
25 KOG0661 MAPK related serine/th 99.9 4.1E-26 8.9E-31 219.1 4.5 143 298-447 9-154 (538)
26 KOG0193 Serine/threonine prote 99.9 1.2E-25 2.7E-30 221.5 7.8 149 290-447 383-532 (678)
27 KOG0583 Serine/threonine prote 99.9 1.1E-24 2.3E-29 214.9 13.5 144 297-447 15-165 (370)
28 KOG0591 NIMA (never in mitosis 99.9 3.7E-26 7.9E-31 206.1 2.5 149 298-447 18-172 (375)
29 KOG2052 Activin A type IB rece 99.9 1.8E-24 3.9E-29 206.3 14.0 139 299-447 211-360 (513)
30 cd05102 PTKc_VEGFR3 Catalytic 99.9 7.9E-25 1.7E-29 215.5 11.9 149 296-447 4-218 (338)
31 cd05096 PTKc_DDR1 Catalytic do 99.9 2.7E-24 5.8E-29 208.5 14.1 146 299-447 5-182 (304)
32 KOG0594 Protein kinase PCTAIRE 99.9 1.6E-24 3.5E-29 202.9 11.8 145 299-447 11-164 (323)
33 KOG0198 MEKK and related serin 99.9 2.5E-24 5.4E-29 204.7 13.0 142 300-448 18-163 (313)
34 KOG1094 Discoidin domain recep 99.9 6.9E-25 1.5E-29 214.8 8.9 145 298-447 537-681 (807)
35 cd05064 PTKc_EphR_A10 Catalyti 99.9 3.9E-24 8.4E-29 203.3 13.7 143 299-447 5-151 (266)
36 KOG0597 Serine-threonine prote 99.9 9.4E-25 2E-29 213.3 9.3 141 299-447 2-144 (808)
37 KOG0610 Putative serine/threon 99.9 1.7E-24 3.7E-29 204.9 10.7 144 299-447 77-223 (459)
38 cd05628 STKc_NDR1 Catalytic do 99.9 3.4E-24 7.4E-29 213.2 13.0 142 299-447 1-145 (363)
39 KOG0658 Glycogen synthase kina 99.9 5.9E-25 1.3E-29 205.7 6.5 138 301-447 26-170 (364)
40 cd05599 STKc_NDR_like Catalyti 99.9 3.9E-24 8.5E-29 212.8 12.6 142 299-447 1-145 (364)
41 cd05629 STKc_NDR_like_fungal C 99.9 5E-24 1.1E-28 213.1 13.3 142 299-447 1-145 (377)
42 cd05612 STKc_PRKX_like Catalyt 99.9 4.6E-24 9.9E-29 205.7 11.7 142 299-447 1-145 (291)
43 cd05626 STKc_LATS2 Catalytic d 99.9 6.9E-24 1.5E-28 212.4 13.3 141 300-447 2-145 (381)
44 cd05104 PTKc_Kit Catalytic dom 99.9 5.5E-24 1.2E-28 212.5 12.2 148 297-447 33-258 (375)
45 PTZ00263 protein kinase A cata 99.9 6.9E-24 1.5E-28 208.1 12.7 142 299-447 18-162 (329)
46 cd05571 STKc_PKB Catalytic dom 99.9 1.3E-23 2.8E-28 205.7 13.8 136 305-447 1-139 (323)
47 cd07871 STKc_PCTAIRE3 Catalyti 99.9 1.5E-23 3.2E-28 201.8 13.6 142 299-447 5-147 (288)
48 PTZ00426 cAMP-dependent protei 99.9 1.1E-23 2.3E-28 207.6 12.7 143 298-447 29-175 (340)
49 cd05621 STKc_ROCK2 Catalytic d 99.9 9E-24 2E-28 210.5 12.3 146 294-447 38-186 (370)
50 cd05625 STKc_LATS1 Catalytic d 99.9 9.9E-24 2.1E-28 211.3 12.6 141 300-447 2-145 (382)
51 cd05598 STKc_LATS Catalytic do 99.9 1.2E-23 2.6E-28 210.3 13.1 141 300-447 2-145 (376)
52 KOG1095 Protein tyrosine kinas 99.9 5.1E-24 1.1E-28 225.9 10.6 147 298-447 691-846 (1025)
53 cd05595 STKc_PKB_beta Catalyti 99.9 1.8E-23 4E-28 204.6 13.8 136 305-447 1-139 (323)
54 cd07869 STKc_PFTAIRE1 Catalyti 99.9 2.3E-23 4.9E-28 201.9 14.3 143 298-447 4-147 (303)
55 cd05631 STKc_GRK4 Catalytic do 99.9 2.1E-23 4.6E-28 200.4 13.2 142 301-447 2-146 (285)
56 cd05600 STKc_Sid2p_Dbf2p Catal 99.9 1.8E-23 3.8E-28 205.6 12.9 141 300-447 2-145 (333)
57 KOG0588 Serine/threonine prote 99.9 6.6E-24 1.4E-28 211.1 9.8 141 300-447 13-156 (786)
58 KOG0694 Serine/threonine prote 99.9 8.1E-24 1.8E-28 211.9 10.2 145 295-447 364-512 (694)
59 cd05106 PTKc_CSF-1R Catalytic 99.9 1.6E-23 3.4E-28 209.1 12.4 149 296-447 35-256 (374)
60 cd05593 STKc_PKB_gamma Catalyt 99.9 3E-23 6.5E-28 203.5 14.1 136 305-447 1-139 (328)
61 cd05585 STKc_YPK1_like Catalyt 99.9 3.5E-23 7.7E-28 201.6 13.8 134 307-447 1-137 (312)
62 cd05594 STKc_PKB_alpha Catalyt 99.9 5.7E-23 1.2E-27 201.3 15.2 136 305-447 1-140 (325)
63 cd05627 STKc_NDR2 Catalytic do 99.9 2.9E-23 6.4E-28 206.2 13.4 142 299-447 1-145 (360)
64 cd05108 PTKc_EGFR Catalytic do 99.9 3.7E-23 8.1E-28 201.7 13.6 142 299-447 7-153 (316)
65 cd05596 STKc_ROCK Catalytic do 99.9 1.6E-23 3.5E-28 208.8 10.9 143 297-447 41-186 (370)
66 cd06650 PKc_MEK1 Catalytic dom 99.9 7.1E-23 1.5E-27 201.3 14.9 144 298-447 4-148 (333)
67 cd05597 STKc_DMPK_like Catalyt 99.9 4.1E-23 8.8E-28 202.8 13.2 143 299-447 1-146 (331)
68 cd05601 STKc_CRIK Catalytic do 99.9 4.4E-23 9.5E-28 202.5 13.2 143 299-447 1-146 (330)
69 cd06649 PKc_MEK2 Catalytic dom 99.9 6.7E-23 1.5E-27 201.3 14.5 144 298-447 4-148 (331)
70 cd05624 STKc_MRCK_beta Catalyt 99.9 4.8E-23 1E-27 202.4 13.3 143 299-447 1-146 (331)
71 cd05105 PTKc_PDGFR_alpha Catal 99.9 4.2E-23 9.1E-28 207.3 13.1 148 297-447 35-281 (400)
72 cd05622 STKc_ROCK1 Catalytic d 99.9 3.7E-23 8.1E-28 206.2 12.5 149 291-447 35-186 (371)
73 cd05573 STKc_ROCK_NDR_like Cat 99.9 3.3E-23 7.2E-28 204.9 12.0 142 299-447 1-145 (350)
74 cd05114 PTKc_Tec_Rlk Catalytic 99.9 7.8E-23 1.7E-27 193.1 13.9 141 299-447 4-144 (256)
75 cd05033 PTKc_EphR Catalytic do 99.9 1E-22 2.3E-27 193.3 14.8 144 298-447 3-150 (266)
76 cd05582 STKc_RSK_N N-terminal 99.9 7.2E-23 1.6E-27 199.9 13.9 136 305-447 2-142 (318)
77 cd05608 STKc_GRK1 Catalytic do 99.9 7.6E-23 1.7E-27 196.0 13.5 138 307-447 1-141 (280)
78 cd05584 STKc_p70S6K Catalytic 99.9 8E-23 1.7E-27 200.1 13.7 136 305-447 2-144 (323)
79 KOG1989 ARK protein kinase fam 99.9 2E-23 4.3E-28 215.0 9.7 144 300-447 38-190 (738)
80 PLN00034 mitogen-activated pro 99.9 4.4E-23 9.4E-28 204.5 11.7 138 299-447 74-212 (353)
81 cd05084 PTKc_Fes Catalytic dom 99.9 1.3E-22 2.9E-27 190.9 14.3 137 305-447 1-138 (252)
82 cd05587 STKc_cPKC Catalytic do 99.9 8.9E-23 1.9E-27 199.8 13.5 141 300-447 1-145 (324)
83 cd05588 STKc_aPKC Catalytic do 99.9 1.1E-22 2.3E-27 199.7 14.0 136 305-447 1-140 (329)
84 cd05591 STKc_nPKC_epsilon Cata 99.9 1.1E-22 2.4E-27 198.9 13.9 136 305-447 1-140 (321)
85 cd05042 PTKc_Aatyk Catalytic d 99.9 1.3E-22 2.9E-27 192.9 14.0 139 306-447 2-144 (269)
86 cd05614 STKc_MSK2_N N-terminal 99.9 1E-22 2.2E-27 200.0 13.3 141 300-447 1-149 (332)
87 cd05623 STKc_MRCK_alpha Cataly 99.9 1.1E-22 2.4E-27 199.9 13.4 143 299-447 1-146 (332)
88 PF07714 Pkinase_Tyr: Protein 99.9 5.2E-23 1.1E-27 194.9 10.7 139 304-447 4-147 (259)
89 KOG0578 p21-activated serine/t 99.9 3.8E-23 8.2E-28 203.2 9.9 140 299-447 273-413 (550)
90 cd05062 PTKc_IGF-1R Catalytic 99.9 1.1E-22 2.3E-27 194.4 12.7 148 297-447 4-163 (277)
91 cd05107 PTKc_PDGFR_beta Cataly 99.9 9.4E-23 2E-27 204.8 12.8 149 296-447 34-283 (401)
92 cd05618 STKc_aPKC_iota Catalyt 99.9 1.5E-22 3.2E-27 198.7 13.9 136 305-447 1-140 (329)
93 cd07872 STKc_PCTAIRE2 Catalyti 99.9 1.6E-22 3.5E-27 196.5 13.9 142 299-447 6-148 (309)
94 cd05589 STKc_PKN Catalytic dom 99.9 1.2E-22 2.6E-27 198.9 13.0 139 301-447 1-145 (324)
95 cd05066 PTKc_EphR_A Catalytic 99.9 1.9E-22 4.1E-27 191.7 14.0 143 299-447 4-150 (267)
96 cd05061 PTKc_InsR Catalytic do 99.9 1.3E-22 2.9E-27 195.1 12.9 149 296-447 3-163 (288)
97 cd05592 STKc_nPKC_theta_delta 99.9 1.9E-22 4.1E-27 196.8 14.1 136 305-447 1-140 (316)
98 cd05590 STKc_nPKC_eta Catalyti 99.9 1.5E-22 3.3E-27 197.8 13.4 136 305-447 1-140 (320)
99 cd05090 PTKc_Ror1 Catalytic do 99.9 1.9E-22 4.1E-27 193.4 13.8 146 299-447 5-168 (283)
100 cd05603 STKc_SGK2 Catalytic do 99.9 1.9E-22 4E-27 197.2 14.0 136 305-447 1-140 (321)
101 cd05605 STKc_GRK4_like Catalyt 99.9 1.4E-22 3E-27 194.7 12.9 142 301-447 2-146 (285)
102 cd05086 PTKc_Aatyk2 Catalytic 99.9 2.7E-22 5.9E-27 190.8 14.6 139 306-447 2-143 (268)
103 cd05619 STKc_nPKC_theta Cataly 99.9 2.2E-22 4.9E-27 196.3 14.2 136 305-447 1-140 (316)
104 cd05072 PTKc_Lyn Catalytic dom 99.9 2.2E-22 4.7E-27 190.4 13.5 143 298-447 5-147 (261)
105 cd05113 PTKc_Btk_Bmx Catalytic 99.9 2.8E-22 6.2E-27 189.4 14.2 141 299-447 4-144 (256)
106 KOG0662 Cyclin-dependent kinas 99.9 3.2E-23 7E-28 175.7 6.8 141 300-447 3-145 (292)
107 cd05620 STKc_nPKC_delta Cataly 99.9 2.5E-22 5.4E-27 195.9 14.1 136 305-447 1-140 (316)
108 cd05616 STKc_cPKC_beta Catalyt 99.9 2.1E-22 4.6E-27 197.0 13.7 141 300-447 1-145 (323)
109 cd05575 STKc_SGK Catalytic dom 99.9 2.3E-22 5E-27 196.8 13.9 136 305-447 1-140 (323)
110 cd05088 PTKc_Tie2 Catalytic do 99.9 2.3E-22 5E-27 195.0 13.7 147 298-447 6-168 (303)
111 cd05068 PTKc_Frk_like Catalyti 99.9 2.7E-22 5.8E-27 189.9 13.8 144 297-447 4-147 (261)
112 cd06615 PKc_MEK Catalytic doma 99.9 2.8E-22 6.1E-27 194.8 14.3 143 299-447 1-144 (308)
113 cd07848 STKc_CDKL5 Catalytic d 99.9 1.6E-22 3.5E-27 194.2 12.4 142 299-447 1-144 (287)
114 cd05085 PTKc_Fer Catalytic dom 99.9 4.3E-22 9.4E-27 187.1 14.9 137 305-447 1-137 (250)
115 cd05097 PTKc_DDR_like Catalyti 99.9 2.4E-22 5.2E-27 194.0 13.5 146 299-447 5-173 (295)
116 PHA02988 hypothetical protein; 99.9 4.4E-22 9.4E-27 191.2 15.2 137 304-447 25-167 (283)
117 cd05049 PTKc_Trk Catalytic dom 99.9 2.5E-22 5.4E-27 192.0 13.3 146 299-447 5-166 (280)
118 cd05604 STKc_SGK3 Catalytic do 99.9 2.7E-22 5.9E-27 196.4 13.8 136 305-447 1-140 (325)
119 cd05615 STKc_cPKC_alpha Cataly 99.9 2E-22 4.3E-27 197.3 12.8 141 300-447 1-145 (323)
120 cd05103 PTKc_VEGFR2 Catalytic 99.9 2.4E-22 5.2E-27 198.4 13.3 147 298-447 6-223 (343)
121 cd05087 PTKc_Aatyk1_Aatyk3 Cat 99.9 4.6E-22 9.9E-27 189.3 14.7 140 305-447 1-144 (269)
122 cd07859 STKc_TDY_MAPK_plant Ca 99.9 2E-22 4.4E-27 198.1 12.6 140 300-447 1-147 (338)
123 cd05059 PTKc_Tec_like Catalyti 99.9 4.2E-22 9.1E-27 188.1 14.1 140 300-447 5-144 (256)
124 cd05053 PTKc_FGFR Catalytic do 99.9 2.4E-22 5.3E-27 193.5 12.5 149 296-447 9-176 (293)
125 cd05617 STKc_aPKC_zeta Catalyt 99.9 3.2E-22 6.8E-27 196.2 13.4 136 305-447 1-140 (327)
126 cd05079 PTKc_Jak1_rpt2 Catalyt 99.9 4.8E-22 1E-26 190.8 14.3 141 301-447 6-153 (284)
127 cd05602 STKc_SGK1 Catalytic do 99.9 4.7E-22 1E-26 194.8 14.2 136 305-447 1-140 (325)
128 cd05048 PTKc_Ror Catalytic Dom 99.9 5.7E-22 1.2E-26 189.9 14.5 146 299-447 5-168 (283)
129 cd08228 STKc_Nek6 Catalytic do 99.9 5.2E-22 1.1E-26 188.4 14.0 146 299-447 2-150 (267)
130 cd05570 STKc_PKC Catalytic dom 99.9 4.8E-22 1E-26 194.1 14.0 136 305-447 1-140 (318)
131 cd05148 PTKc_Srm_Brk Catalytic 99.9 2.9E-22 6.3E-27 189.5 12.1 145 297-447 4-148 (261)
132 KOG0612 Rho-associated, coiled 99.9 2.9E-23 6.2E-28 217.0 5.6 150 291-447 67-219 (1317)
133 cd05095 PTKc_DDR2 Catalytic do 99.9 5E-22 1.1E-26 191.8 13.9 146 299-447 5-174 (296)
134 cd05101 PTKc_FGFR2 Catalytic d 99.9 4.9E-22 1.1E-26 192.7 13.7 148 297-447 13-181 (304)
135 KOG0586 Serine/threonine prote 99.9 2.5E-22 5.3E-27 199.2 11.6 143 298-447 55-199 (596)
136 cd05089 PTKc_Tie1 Catalytic do 99.9 5.6E-22 1.2E-26 191.6 14.0 146 299-447 2-163 (297)
137 cd08227 PK_STRAD_alpha Pseudok 99.9 6.1E-22 1.3E-26 194.1 14.4 139 304-447 3-145 (327)
138 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 99.9 6.8E-22 1.5E-26 189.6 14.3 142 299-447 4-152 (284)
139 cd05046 PTK_CCK4 Pseudokinase 99.9 5.6E-22 1.2E-26 189.2 13.6 146 299-447 5-161 (275)
140 PRK13184 pknD serine/threonine 99.9 4.6E-22 1E-26 212.2 14.3 146 299-447 2-157 (932)
141 cd05098 PTKc_FGFR1 Catalytic d 99.9 4.5E-22 9.8E-27 193.2 13.1 147 298-447 17-184 (307)
142 cd05065 PTKc_EphR_B Catalytic 99.9 5.3E-22 1.1E-26 188.8 13.3 142 300-447 5-150 (269)
143 cd05050 PTKc_Musk Catalytic do 99.9 5.6E-22 1.2E-26 190.6 13.6 147 298-447 4-174 (288)
144 cd05054 PTKc_VEGFR Catalytic d 99.9 3.1E-22 6.7E-27 197.0 11.9 148 297-447 5-217 (337)
145 cd08224 STKc_Nek6_Nek7 Catalyt 99.9 9.3E-22 2E-26 186.5 14.7 146 299-447 2-150 (267)
146 cd05045 PTKc_RET Catalytic dom 99.9 8E-22 1.7E-26 189.8 14.4 145 300-447 1-171 (290)
147 PHA03212 serine/threonine kina 99.9 4.3E-22 9.4E-27 199.7 13.0 135 298-447 91-226 (391)
148 cd05111 PTK_HER3 Pseudokinase 99.9 7.8E-22 1.7E-26 188.9 14.2 142 299-447 7-153 (279)
149 cd05080 PTKc_Tyk2_rpt2 Catalyt 99.9 9.9E-22 2.2E-26 188.4 14.8 138 302-447 7-151 (283)
150 cd05115 PTKc_Zap-70 Catalytic 99.9 1E-21 2.2E-26 185.8 14.6 134 307-447 3-139 (257)
151 cd05109 PTKc_HER2 Catalytic do 99.9 7.8E-22 1.7E-26 188.7 13.9 143 298-447 6-153 (279)
152 cd05063 PTKc_EphR_A2 Catalytic 99.9 8.6E-22 1.9E-26 187.1 14.0 144 298-447 4-151 (268)
153 cd07862 STKc_CDK6 Catalytic do 99.9 1E-21 2.2E-26 189.0 14.5 142 300-447 2-154 (290)
154 cd05607 STKc_GRK7 Catalytic do 99.9 1.2E-21 2.5E-26 187.5 14.8 136 307-447 1-139 (277)
155 cd07853 STKc_NLK Catalytic dom 99.9 6.8E-22 1.5E-26 197.3 13.7 140 300-447 1-147 (372)
156 cd05039 PTKc_Csk_like Catalyti 99.9 1.1E-21 2.3E-26 185.2 14.3 142 298-447 5-146 (256)
157 cd07873 STKc_PCTAIRE1 Catalyti 99.9 9E-22 1.9E-26 190.5 14.0 142 299-447 6-148 (301)
158 cd05032 PTKc_InsR_like Catalyt 99.9 7E-22 1.5E-26 188.6 13.0 147 298-447 5-163 (277)
159 PTZ00267 NIMA-related protein 99.9 5.4E-22 1.2E-26 204.3 13.0 143 301-447 69-213 (478)
160 cd05051 PTKc_DDR Catalytic dom 99.9 1.2E-21 2.6E-26 188.9 14.6 147 298-447 4-174 (296)
161 cd05043 PTK_Ryk Pseudokinase d 99.9 7.3E-22 1.6E-26 188.9 13.0 148 297-447 4-161 (280)
162 cd05052 PTKc_Abl Catalytic dom 99.9 1.1E-21 2.3E-26 186.1 13.9 142 299-447 6-148 (263)
163 KOG4721 Serine/threonine prote 99.9 1E-22 2.2E-27 199.0 7.0 130 302-447 127-256 (904)
164 KOG0660 Mitogen-activated prot 99.9 2.4E-22 5.1E-27 188.0 9.0 141 299-447 22-169 (359)
165 cd06646 STKc_MAP4K5 Catalytic 99.9 1.2E-21 2.5E-26 186.1 14.1 142 298-447 8-150 (267)
166 cd05099 PTKc_FGFR4 Catalytic d 99.9 8.4E-22 1.8E-26 192.0 13.4 149 297-448 10-179 (314)
167 cd05034 PTKc_Src_like Catalyti 99.9 1.1E-21 2.4E-26 185.5 13.9 144 297-447 4-147 (261)
168 cd05067 PTKc_Lck_Blk Catalytic 99.9 1.1E-21 2.4E-26 185.6 13.8 143 297-447 4-146 (260)
169 cd05047 PTKc_Tie Catalytic dom 99.9 1.7E-21 3.6E-26 185.6 15.1 140 305-447 1-156 (270)
170 cd05057 PTKc_EGFR_like Catalyt 99.9 1.2E-21 2.5E-26 187.5 14.1 142 299-447 7-153 (279)
171 cd05055 PTKc_PDGFR Catalytic d 99.9 8.4E-22 1.8E-26 191.0 13.0 146 297-447 33-185 (302)
172 PTZ00283 serine/threonine prot 99.9 4.1E-22 8.9E-27 205.6 11.3 148 297-447 30-187 (496)
173 cd05586 STKc_Sck1_like Catalyt 99.9 9.6E-22 2.1E-26 193.0 13.3 134 307-447 1-140 (330)
174 KOG0032 Ca2+/calmodulin-depend 99.9 8.9E-22 1.9E-26 194.2 13.0 143 298-448 34-184 (382)
175 cd05075 PTKc_Axl Catalytic dom 99.9 1.8E-21 4E-26 185.2 14.8 143 302-447 2-156 (272)
176 cd05632 STKc_GRK5 Catalytic do 99.9 1.1E-21 2.4E-26 188.5 13.3 142 301-447 2-146 (285)
177 cd05036 PTKc_ALK_LTK Catalytic 99.9 1.1E-21 2.3E-26 187.6 13.2 148 297-447 4-163 (277)
178 cd05076 PTK_Tyk2_rpt1 Pseudoki 99.9 1E-21 2.2E-26 187.6 13.0 135 306-447 2-168 (274)
179 cd07844 STKc_PCTAIRE_like Cata 99.9 1.2E-21 2.7E-26 188.4 13.6 142 299-447 5-147 (291)
180 cd08229 STKc_Nek7 Catalytic do 99.9 9.8E-22 2.1E-26 186.5 12.7 146 299-447 2-150 (267)
181 cd06631 STKc_YSK4 Catalytic do 99.9 1.6E-21 3.4E-26 185.0 13.9 141 300-447 1-146 (265)
182 cd05071 PTKc_Src Catalytic dom 99.9 1.7E-21 3.7E-26 184.7 14.2 142 298-447 5-146 (262)
183 cd05093 PTKc_TrkB Catalytic do 99.9 1.7E-21 3.6E-26 187.4 14.2 145 299-447 5-164 (288)
184 cd05070 PTKc_Fyn_Yrk Catalytic 99.9 1.8E-21 3.9E-26 184.2 14.2 142 298-447 5-146 (260)
185 cd06619 PKc_MKK5 Catalytic dom 99.9 1.6E-21 3.4E-26 186.7 13.9 138 299-447 1-139 (279)
186 cd05035 PTKc_Axl_like Catalyti 99.9 2.2E-21 4.7E-26 184.6 14.8 144 301-447 1-157 (273)
187 KOG0607 MAP kinase-interacting 99.9 3E-22 6.5E-27 183.7 8.4 144 291-447 75-223 (463)
188 KOG2345 Serine/threonine prote 99.9 1.6E-22 3.5E-27 179.7 6.4 148 298-447 20-173 (302)
189 cd05091 PTKc_Ror2 Catalytic do 99.9 9.5E-22 2E-26 188.5 12.2 145 300-447 6-168 (283)
190 cd06617 PKc_MKK3_6 Catalytic d 99.9 1.3E-21 2.8E-26 187.4 13.1 146 299-447 1-148 (283)
191 cd05610 STKc_MASTL Catalytic d 99.9 1.1E-21 2.3E-26 209.3 13.8 142 299-447 4-148 (669)
192 cd05100 PTKc_FGFR3 Catalytic d 99.9 1.3E-21 2.8E-26 192.4 13.4 146 299-447 12-178 (334)
193 cd05037 PTK_Jak_rpt1 Pseudokin 99.9 1.7E-21 3.7E-26 183.9 13.7 134 305-447 1-152 (259)
194 cd05630 STKc_GRK6 Catalytic do 99.9 1.7E-21 3.6E-26 187.3 13.7 142 301-447 2-146 (285)
195 KOG4250 TANK binding protein k 99.9 3.6E-22 7.8E-27 200.6 9.4 140 304-447 18-168 (732)
196 cd08219 STKc_Nek3 Catalytic do 99.9 2.5E-21 5.3E-26 182.6 14.5 143 300-447 1-144 (255)
197 KOG1025 Epidermal growth facto 99.9 7.3E-22 1.6E-26 200.3 11.3 140 302-448 699-843 (1177)
198 KOG4257 Focal adhesion tyrosin 99.9 6.1E-22 1.3E-26 195.5 10.4 146 295-447 385-535 (974)
199 KOG4278 Protein tyrosine kinas 99.9 1.8E-22 3.8E-27 199.0 6.6 149 292-447 260-409 (1157)
200 cd06622 PKc_MAPKK_PBS2_like Ca 99.9 1.3E-21 2.9E-26 187.7 12.4 146 299-447 1-147 (286)
201 cd08529 STKc_FA2-like Catalyti 99.9 2.9E-21 6.2E-26 182.0 14.2 143 300-447 1-145 (256)
202 cd00192 PTKc Catalytic domain 99.9 3.7E-21 8E-26 181.4 14.7 140 305-447 1-149 (262)
203 cd07847 STKc_CDKL1_4 Catalytic 99.9 3.1E-21 6.8E-26 184.9 14.2 142 299-447 1-144 (286)
204 cd07870 STKc_PFTAIRE2 Catalyti 99.9 2.3E-21 5.1E-26 186.6 13.1 143 298-447 4-147 (291)
205 cd05580 STKc_PKA Catalytic dom 99.9 2.4E-21 5.2E-26 186.5 13.1 142 299-447 1-145 (290)
206 cd07861 STKc_CDK1_euk Catalyti 99.9 3.7E-21 8E-26 184.4 14.3 143 300-447 1-145 (285)
207 cd05038 PTKc_Jak_rpt2 Catalyti 99.9 3.3E-21 7.3E-26 184.4 14.0 143 299-447 4-153 (284)
208 cd06638 STKc_myosinIIIA Cataly 99.9 1.7E-21 3.6E-26 186.9 11.9 153 290-447 9-168 (286)
209 cd06625 STKc_MEKK3_like Cataly 99.9 3.9E-21 8.5E-26 181.9 14.2 142 299-447 2-148 (263)
210 cd08221 STKc_Nek9 Catalytic do 99.9 4.1E-21 8.8E-26 181.1 14.2 143 300-447 1-145 (256)
211 cd05069 PTKc_Yes Catalytic dom 99.9 4.9E-21 1.1E-25 181.3 14.7 141 299-447 6-146 (260)
212 cd05082 PTKc_Csk Catalytic dom 99.9 4.9E-21 1.1E-25 180.7 14.6 140 299-447 6-146 (256)
213 cd05073 PTKc_Hck Catalytic dom 99.9 2.7E-21 5.8E-26 183.0 12.8 143 297-447 4-146 (260)
214 PHA03209 serine/threonine kina 99.9 3.3E-21 7.2E-26 191.3 13.9 138 296-447 63-201 (357)
215 cd05041 PTKc_Fes_like Catalyti 99.9 4.8E-21 1E-25 180.1 14.3 138 305-448 1-138 (251)
216 cd06620 PKc_MAPKK_Byr1_like Ca 99.9 2.3E-21 5E-26 186.0 12.4 143 299-447 5-148 (284)
217 cd07841 STKc_CDK7 Catalytic do 99.9 4.1E-21 9E-26 185.4 14.2 141 300-447 1-146 (298)
218 cd05116 PTKc_Syk Catalytic dom 99.9 5.3E-21 1.1E-25 180.7 14.5 134 306-447 2-139 (257)
219 cd05040 PTKc_Ack_like Catalyti 99.9 3.9E-21 8.5E-26 181.3 13.6 137 305-447 1-141 (257)
220 cd06656 STKc_PAK3 Catalytic do 99.9 3.5E-21 7.6E-26 186.1 13.5 140 299-447 19-159 (297)
221 cd06624 STKc_ASK Catalytic dom 99.9 2.9E-21 6.2E-26 183.6 12.7 148 295-447 4-153 (268)
222 PF00069 Pkinase: Protein kina 99.9 9.5E-22 2.1E-26 185.6 9.3 139 302-447 2-142 (260)
223 cd06632 STKc_MEKK1_plant Catal 99.9 5.9E-21 1.3E-25 179.9 14.6 141 300-447 1-146 (258)
224 KOG0577 Serine/threonine prote 99.9 2.4E-22 5.3E-27 197.2 5.2 140 301-447 28-170 (948)
225 cd05056 PTKc_FAK Catalytic dom 99.9 3.7E-21 8E-26 183.0 13.3 143 298-447 5-151 (270)
226 cd05077 PTK_Jak1_rpt1 Pseudoki 99.9 5E-21 1.1E-25 181.6 14.0 136 305-447 1-156 (262)
227 cd06611 STKc_SLK_like Catalyti 99.9 2.9E-21 6.2E-26 184.8 12.4 143 298-447 4-147 (280)
228 cd05058 PTKc_Met_Ron Catalytic 99.9 6E-21 1.3E-25 180.6 14.3 137 305-447 1-142 (262)
229 cd05609 STKc_MAST Catalytic do 99.9 4.7E-21 1E-25 185.9 13.8 142 299-447 1-145 (305)
230 cd06652 STKc_MEKK2 Catalytic d 99.9 4.8E-21 1E-25 181.7 13.5 142 299-447 2-150 (265)
231 cd05094 PTKc_TrkC Catalytic do 99.9 4.9E-21 1.1E-25 184.4 13.7 145 299-447 5-167 (291)
232 cd05110 PTKc_HER4 Catalytic do 99.9 4.5E-21 9.7E-26 185.9 13.4 143 298-447 6-153 (303)
233 cd05574 STKc_phototropin_like 99.9 5.5E-21 1.2E-25 186.3 14.1 144 299-447 1-147 (316)
234 cd06645 STKc_MAP4K3 Catalytic 99.9 3.2E-21 6.9E-26 183.1 12.0 141 299-447 9-150 (267)
235 PHA03211 serine/threonine kina 99.9 3.8E-21 8.2E-26 195.8 13.4 135 299-447 169-304 (461)
236 cd05060 PTKc_Syk_like Catalyti 99.9 7.6E-21 1.6E-25 179.5 14.5 135 305-447 1-139 (257)
237 cd06654 STKc_PAK1 Catalytic do 99.9 4.7E-21 1E-25 185.2 13.3 140 299-447 20-160 (296)
238 PTZ00036 glycogen synthase kin 99.9 3E-21 6.5E-26 196.6 12.6 141 298-447 65-215 (440)
239 cd07878 STKc_p38beta_MAPK11 Ca 99.9 3.5E-21 7.6E-26 190.0 12.7 143 296-447 12-162 (343)
240 KOG0589 Serine/threonine prote 99.9 1.1E-21 2.4E-26 191.4 8.9 145 299-448 4-151 (426)
241 cd06629 STKc_MAPKKK_Bck1_like 99.9 5.9E-21 1.3E-25 181.8 13.6 140 301-447 3-152 (272)
242 cd07846 STKc_CDKL2_3 Catalytic 99.9 2.8E-21 6E-26 185.3 11.4 142 299-447 1-144 (286)
243 cd06642 STKc_STK25-YSK1 Cataly 99.9 2.8E-21 6.1E-26 184.7 11.4 139 301-447 6-145 (277)
244 smart00219 TyrKc Tyrosine kina 99.9 8.9E-21 1.9E-25 178.6 14.6 142 301-447 1-147 (258)
245 cd07876 STKc_JNK2 Catalytic do 99.9 3.8E-21 8.3E-26 191.0 12.7 141 297-447 19-167 (359)
246 cd05112 PTKc_Itk Catalytic dom 99.9 7.1E-21 1.5E-25 179.5 13.7 141 299-447 4-144 (256)
247 cd06640 STKc_MST4 Catalytic do 99.9 6.7E-21 1.5E-25 182.1 13.7 140 300-447 5-145 (277)
248 KOG0599 Phosphorylase kinase g 99.8 8.4E-22 1.8E-26 177.3 6.8 144 297-447 15-167 (411)
249 cd05092 PTKc_TrkA Catalytic do 99.8 8.8E-21 1.9E-25 181.6 14.4 145 299-447 5-166 (280)
250 cd06644 STKc_STK10_LOK Catalyt 99.8 9.8E-21 2.1E-25 182.4 14.7 142 299-447 12-154 (292)
251 cd06637 STKc_TNIK Catalytic do 99.8 6.9E-21 1.5E-25 181.2 13.5 144 297-447 4-155 (272)
252 cd07836 STKc_Pho85 Catalytic d 99.8 8.2E-21 1.8E-25 181.9 14.0 143 300-447 1-144 (284)
253 cd05083 PTKc_Chk Catalytic dom 99.8 6.7E-21 1.5E-25 179.6 13.0 139 299-447 6-144 (254)
254 cd06641 STKc_MST3 Catalytic do 99.8 8.9E-21 1.9E-25 181.3 13.9 139 301-447 6-145 (277)
255 cd06621 PKc_MAPKK_Pek1_like Ca 99.8 5.7E-21 1.2E-25 183.6 12.6 146 299-447 1-149 (287)
256 cd06612 STKc_MST1_2 Catalytic 99.8 1.2E-20 2.6E-25 177.7 14.6 140 299-447 3-143 (256)
257 KOG0201 Serine/threonine prote 99.8 3.7E-22 7.9E-27 190.5 4.1 142 300-448 14-156 (467)
258 cd06639 STKc_myosinIIIB Cataly 99.8 4.3E-21 9.3E-26 184.7 11.6 152 291-447 14-172 (291)
259 KOG0584 Serine/threonine prote 99.8 1.6E-21 3.4E-26 193.8 8.6 139 304-447 45-190 (632)
260 cd06605 PKc_MAPKK Catalytic do 99.8 7.3E-21 1.6E-25 180.2 12.8 143 299-447 1-145 (265)
261 cd05578 STKc_Yank1 Catalytic d 99.8 4.3E-21 9.3E-26 181.3 11.1 141 300-447 1-144 (258)
262 KOG0574 STE20-like serine/thre 99.8 2.7E-22 5.8E-27 182.6 2.6 138 301-447 35-173 (502)
263 cd06630 STKc_MEKK1 Catalytic d 99.8 9.7E-21 2.1E-25 179.7 13.5 142 300-448 1-149 (268)
264 cd06609 STKc_MST3_like Catalyt 99.8 1E-20 2.2E-25 180.4 13.6 140 300-447 2-142 (274)
265 cd05044 PTKc_c-ros Catalytic d 99.8 5.5E-21 1.2E-25 181.6 11.6 140 305-447 1-155 (269)
266 cd06613 STKc_MAP4K3_like Catal 99.8 1.5E-20 3.2E-25 177.7 14.5 143 298-447 2-145 (262)
267 KOG0666 Cyclin C-dependent kin 99.8 1E-21 2.2E-26 179.7 6.1 146 298-447 23-180 (438)
268 cd06628 STKc_MAPKKK_Byr2_like 99.8 1.4E-20 3E-25 178.6 14.2 140 301-447 2-150 (267)
269 KOG0986 G protein-coupled rece 99.8 9.5E-22 2.1E-26 188.0 6.0 148 295-447 181-331 (591)
270 cd07874 STKc_JNK3 Catalytic do 99.8 5.2E-21 1.1E-25 189.7 11.4 141 297-447 15-163 (355)
271 cd06610 STKc_OSR1_SPAK Catalyt 99.8 2.1E-20 4.5E-25 177.1 14.9 145 299-447 1-146 (267)
272 cd06623 PKc_MAPKK_plant_like C 99.8 1.5E-20 3.3E-25 177.8 13.9 142 299-447 1-144 (264)
273 cd06626 STKc_MEKK4 Catalytic d 99.8 1.5E-20 3.1E-25 178.0 13.8 141 300-447 1-143 (264)
274 cd05078 PTK_Jak2_Jak3_rpt1 Pse 99.8 4.6E-21 1E-25 181.3 10.3 131 305-442 1-139 (258)
275 cd08218 STKc_Nek1 Catalytic do 99.8 1.5E-20 3.2E-25 177.3 13.8 143 300-447 1-145 (256)
276 cd07863 STKc_CDK4 Catalytic do 99.8 1E-20 2.2E-25 181.7 12.8 142 300-447 1-152 (288)
277 cd05613 STKc_MSK1_N N-terminal 99.8 1.4E-20 3E-25 181.1 13.7 141 300-447 1-149 (290)
278 cd07832 STKc_CCRK Catalytic do 99.8 1.5E-20 3.3E-25 180.1 13.8 141 300-447 1-143 (286)
279 cd06651 STKc_MEKK3 Catalytic d 99.8 2.2E-20 4.9E-25 177.3 14.9 141 300-447 3-150 (266)
280 cd06917 STKc_NAK1_like Catalyt 99.8 1.5E-20 3.2E-25 179.5 13.6 140 300-447 2-145 (277)
281 PTZ00266 NIMA-related protein 99.8 6.4E-21 1.4E-25 204.4 12.0 143 296-438 10-160 (1021)
282 cd07875 STKc_JNK1 Catalytic do 99.8 1.1E-20 2.4E-25 188.0 13.0 140 298-447 23-170 (364)
283 cd07860 STKc_CDK2_3 Catalytic 99.8 1.2E-20 2.6E-25 180.9 12.6 142 300-447 1-144 (284)
284 cd07839 STKc_CDK5 Catalytic do 99.8 8.2E-21 1.8E-25 182.0 11.3 141 300-447 1-143 (284)
285 PHA03207 serine/threonine kina 99.8 9.6E-21 2.1E-25 190.4 12.3 136 298-447 91-229 (392)
286 KOG0033 Ca2+/calmodulin-depend 99.8 1.3E-22 2.7E-27 180.0 -1.2 143 298-447 10-157 (355)
287 cd05577 STKc_GRK Catalytic dom 99.8 2.2E-20 4.7E-25 178.5 14.1 136 307-447 1-139 (277)
288 cd07843 STKc_CDC2L1 Catalytic 99.8 1.4E-20 3.1E-25 181.3 12.9 142 299-447 5-150 (293)
289 KOG0608 Warts/lats-like serine 99.8 3.2E-21 6.8E-26 190.7 8.1 142 299-447 629-773 (1034)
290 PRK09188 serine/threonine prot 99.8 1.3E-20 2.8E-25 184.5 12.2 135 296-447 15-156 (365)
291 cd06653 STKc_MEKK3_like_1 Cata 99.8 2.5E-20 5.4E-25 176.8 13.6 142 299-447 2-150 (264)
292 cd08217 STKc_Nek2 Catalytic do 99.8 2.3E-20 4.9E-25 176.4 13.3 148 300-447 1-154 (265)
293 cd07837 STKc_CdkB_plant Cataly 99.8 2E-20 4.4E-25 180.3 13.2 145 299-447 1-155 (295)
294 cd05633 STKc_GRK3 Catalytic do 99.8 2.4E-20 5.3E-25 178.6 13.6 135 306-447 1-141 (279)
295 KOG0690 Serine/threonine prote 99.8 1.2E-21 2.6E-26 180.1 4.3 145 296-447 165-312 (516)
296 cd05074 PTKc_Tyro3 Catalytic d 99.8 4E-20 8.8E-25 176.0 15.0 144 301-447 1-157 (273)
297 cd06643 STKc_SLK Catalytic dom 99.8 3E-20 6.5E-25 178.0 14.2 140 301-447 7-147 (282)
298 cd08226 PK_STRAD_beta Pseudoki 99.8 2.4E-20 5.1E-25 182.9 13.7 138 305-447 4-145 (328)
299 KOG4717 Serine/threonine prote 99.8 4.8E-21 1E-25 185.5 8.5 142 300-447 19-163 (864)
300 cd06655 STKc_PAK2 Catalytic do 99.8 1.9E-20 4.1E-25 180.9 12.8 140 299-447 19-159 (296)
301 cd07868 STKc_CDK8 Catalytic do 99.8 3.2E-20 6.9E-25 181.0 14.3 137 304-447 6-156 (317)
302 cd06614 STKc_PAK Catalytic dom 99.8 4.1E-20 8.9E-25 177.4 14.6 143 297-447 17-160 (286)
303 cd06658 STKc_PAK5 Catalytic do 99.8 1.4E-20 3E-25 181.5 11.1 137 302-447 25-162 (292)
304 cd08528 STKc_Nek10 Catalytic d 99.8 3.8E-20 8.3E-25 175.9 13.9 145 300-447 1-158 (269)
305 cd07864 STKc_CDK12 Catalytic d 99.8 2.9E-20 6.3E-25 179.8 13.3 145 296-447 4-160 (302)
306 cd06608 STKc_myosinIII_like Ca 99.8 3.6E-20 7.9E-25 176.1 13.7 146 297-447 4-157 (275)
307 cd08223 STKc_Nek4 Catalytic do 99.8 4.4E-20 9.4E-25 174.1 13.9 143 300-447 1-146 (257)
308 KOG4236 Serine/threonine prote 99.8 2.3E-20 5.1E-25 181.2 12.0 137 305-447 570-711 (888)
309 cd06647 STKc_PAK_I Catalytic d 99.8 3E-20 6.5E-25 179.3 12.9 141 298-447 18-159 (293)
310 cd05579 STKc_MAST_like Catalyt 99.8 2.4E-20 5.2E-25 176.2 11.9 134 307-447 1-137 (265)
311 cd07833 STKc_CDKL Catalytic do 99.8 2.2E-20 4.8E-25 179.2 11.8 141 300-447 2-144 (288)
312 cd05147 RIO1_euk RIO kinase fa 99.8 1.6E-20 3.4E-25 169.0 10.1 134 304-447 2-161 (190)
313 cd06659 STKc_PAK6 Catalytic do 99.8 2.7E-20 5.9E-25 179.9 12.3 135 304-447 26-161 (297)
314 cd08220 STKc_Nek8 Catalytic do 99.8 4.4E-20 9.6E-25 173.9 13.3 143 300-447 1-146 (256)
315 KOG0199 ACK and related non-re 99.8 3.6E-21 7.7E-26 192.3 5.9 140 302-447 113-256 (1039)
316 cd05572 STKc_cGK_PKG Catalytic 99.8 5.5E-20 1.2E-24 174.1 13.6 134 307-447 1-137 (262)
317 cd06607 STKc_TAO Catalytic dom 99.8 6.4E-20 1.4E-24 178.1 14.1 142 299-447 15-159 (307)
318 cd08215 STKc_Nek Catalytic dom 99.8 8.5E-20 1.8E-24 171.6 14.6 145 300-447 1-147 (258)
319 cd07849 STKc_ERK1_2_like Catal 99.8 2.8E-20 6.2E-25 183.0 11.6 141 298-447 4-150 (336)
320 cd08225 STKc_Nek5 Catalytic do 99.8 4.3E-20 9.3E-25 174.0 12.3 143 300-447 1-146 (257)
321 cd07831 STKc_MOK Catalytic dom 99.8 6.6E-20 1.4E-24 175.3 13.5 139 301-447 1-143 (282)
322 cd07845 STKc_CDK10 Catalytic d 99.8 5.7E-20 1.2E-24 178.6 13.2 143 298-447 6-152 (309)
323 cd06636 STKc_MAP4K4_6 Catalyti 99.8 5.5E-20 1.2E-24 176.1 12.6 151 290-447 7-165 (282)
324 cd07880 STKc_p38gamma_MAPK12 C 99.8 5.2E-20 1.1E-24 181.7 12.7 143 296-447 12-162 (343)
325 cd05581 STKc_PDK1 Catalytic do 99.8 3.8E-20 8.2E-25 176.6 11.3 143 299-448 1-147 (280)
326 cd07865 STKc_CDK9 Catalytic do 99.8 6.2E-20 1.3E-24 178.0 13.0 143 298-447 11-163 (310)
327 cd07842 STKc_CDK8_like Catalyt 99.8 7.6E-20 1.6E-24 177.9 13.6 144 300-447 1-156 (316)
328 cd06627 STKc_Cdc7_like Catalyt 99.8 1.3E-19 2.9E-24 170.2 14.8 141 300-447 1-143 (254)
329 KOG0667 Dual-specificity tyros 99.8 2.2E-20 4.7E-25 187.1 9.8 140 300-447 187-335 (586)
330 PLN00009 cyclin-dependent kina 99.8 1E-19 2.2E-24 175.4 14.3 143 299-447 2-147 (294)
331 cd07830 STKc_MAK_like Catalyti 99.8 5.1E-20 1.1E-24 176.3 12.0 141 301-447 1-143 (283)
332 cd08530 STKc_CNK2-like Catalyt 99.8 4.6E-20 1E-24 173.6 11.5 145 300-447 1-147 (256)
333 cd07877 STKc_p38alpha_MAPK14 C 99.8 6.1E-20 1.3E-24 181.4 12.8 149 290-447 8-164 (345)
334 cd05606 STKc_beta_ARK Catalyti 99.8 1.2E-19 2.5E-24 173.8 14.4 135 306-447 1-141 (278)
335 KOG1035 eIF-2alpha kinase GCN2 99.8 9.6E-21 2.1E-25 199.8 7.3 146 296-447 476-741 (1351)
336 cd07867 STKc_CDC2L6 Catalytic 99.8 1.1E-19 2.3E-24 177.2 14.1 136 305-447 7-156 (317)
337 cd05122 PKc_STE Catalytic doma 99.8 1.6E-19 3.5E-24 169.0 14.7 141 300-447 1-142 (253)
338 cd07840 STKc_CDK9_like Catalyt 99.8 9.2E-20 2E-24 174.6 13.2 140 301-447 1-144 (287)
339 KOG0579 Ste20-like serine/thre 99.8 2.5E-21 5.5E-26 191.3 2.4 139 302-447 35-174 (1187)
340 cd06635 STKc_TAO1 Catalytic do 99.8 1.5E-19 3.3E-24 176.3 14.8 140 301-447 27-169 (317)
341 cd08216 PK_STRAD Pseudokinase 99.8 7.4E-20 1.6E-24 178.1 12.4 136 307-448 10-146 (314)
342 cd07835 STKc_CDK1_like Catalyt 99.8 1.1E-19 2.4E-24 174.1 13.2 141 301-447 1-143 (283)
343 cd05583 STKc_MSK_N N-terminal 99.8 7.8E-20 1.7E-24 175.7 11.9 141 300-447 1-149 (288)
344 cd06606 STKc_MAPKKK Catalytic 99.8 1.7E-19 3.6E-24 169.6 13.9 141 300-447 1-145 (260)
345 cd07855 STKc_ERK5 Catalytic do 99.8 5.8E-20 1.3E-24 180.6 11.1 141 299-447 5-151 (334)
346 cd06648 STKc_PAK_II Catalytic 99.8 1.7E-19 3.6E-24 173.3 14.0 138 301-447 21-159 (285)
347 cd05611 STKc_Rim15_like Cataly 99.8 1.8E-19 3.9E-24 170.3 13.7 136 305-447 2-141 (260)
348 cd06618 PKc_MKK7 Catalytic dom 99.8 1.3E-19 2.8E-24 174.9 12.9 143 298-447 14-159 (296)
349 PTZ00284 protein kinase; Provi 99.8 5.4E-20 1.2E-24 189.1 10.8 144 294-447 124-292 (467)
350 cd07852 STKc_MAPK15 Catalytic 99.8 1.1E-19 2.3E-24 179.0 12.3 142 297-447 5-151 (337)
351 cd07856 STKc_Sty1_Hog1 Catalyt 99.8 1.1E-19 2.5E-24 178.1 12.4 145 294-447 5-152 (328)
352 PLN03224 probable serine/threo 99.8 8.8E-20 1.9E-24 186.1 11.7 148 297-447 143-353 (507)
353 cd06657 STKc_PAK4 Catalytic do 99.8 1.6E-19 3.4E-24 174.2 12.8 134 305-447 26-160 (292)
354 cd07850 STKc_JNK Catalytic dom 99.8 1.6E-19 3.5E-24 178.9 13.2 141 297-447 14-162 (353)
355 cd06616 PKc_MKK4 Catalytic dom 99.8 1.2E-19 2.6E-24 174.3 11.1 144 299-447 4-152 (288)
356 PHA03390 pk1 serine/threonine- 99.8 4.3E-19 9.3E-24 168.8 14.8 142 293-447 8-154 (267)
357 cd05145 RIO1_like RIO kinase f 99.8 2.4E-19 5.1E-24 161.7 12.2 134 304-447 2-161 (190)
358 PHA03210 serine/threonine kina 99.8 7.3E-20 1.6E-24 189.3 10.1 147 297-447 146-311 (501)
359 PTZ00024 cyclin-dependent prot 99.8 2.8E-19 6E-24 175.8 13.8 137 303-447 13-163 (335)
360 KOG0984 Mitogen-activated prot 99.8 5.2E-20 1.1E-24 159.6 7.0 151 294-447 41-193 (282)
361 cd06633 STKc_TAO3 Catalytic do 99.8 6.3E-19 1.4E-23 171.7 15.4 140 301-447 23-165 (313)
362 KOG4279 Serine/threonine prote 99.8 1E-19 2.2E-24 181.7 9.5 138 305-447 581-720 (1226)
363 cd07858 STKc_TEY_MAPK_plant Ca 99.8 2.3E-19 5.1E-24 176.6 11.8 141 299-447 5-152 (337)
364 cd07838 STKc_CDK4_6_like Catal 99.8 5.2E-19 1.1E-23 169.4 13.6 141 301-447 1-151 (287)
365 cd07879 STKc_p38delta_MAPK13 C 99.8 3.2E-19 6.9E-24 176.0 12.1 140 298-447 14-161 (342)
366 cd07834 STKc_MAPK Catalytic do 99.8 2.5E-19 5.4E-24 175.7 11.2 140 300-447 1-147 (330)
367 cd08222 STKc_Nek11 Catalytic d 99.8 2.4E-19 5.1E-24 169.5 10.5 144 300-447 1-149 (260)
368 cd07866 STKc_BUR1 Catalytic do 99.8 2.9E-19 6.3E-24 173.4 11.4 143 298-447 7-159 (311)
369 cd05118 STKc_CMGC Catalytic do 99.8 4E-19 8.8E-24 169.9 12.1 140 301-447 1-142 (283)
370 cd06634 STKc_TAO2 Catalytic do 99.8 5.1E-19 1.1E-23 171.9 13.0 140 301-447 17-159 (308)
371 cd05123 STKc_AGC Catalytic dom 99.8 6E-19 1.3E-23 165.5 12.9 134 307-447 1-137 (250)
372 KOG1152 Signal transduction se 99.8 1.5E-19 3.2E-24 177.5 8.8 142 299-447 561-714 (772)
373 KOG1151 Tousled-like protein k 99.8 5.3E-20 1.1E-24 175.4 5.3 143 300-447 464-617 (775)
374 cd07829 STKc_CDK_like Catalyti 99.8 4.9E-19 1.1E-23 169.2 11.9 140 301-447 1-142 (282)
375 cd07857 STKc_MPK1 Catalytic do 99.8 6.5E-19 1.4E-23 173.1 12.6 140 300-447 1-149 (332)
376 KOG4645 MAPKKK (MAP kinase kin 99.8 6.8E-20 1.5E-24 194.4 4.9 142 299-447 1235-1378(1509)
377 KOG0669 Cyclin T-dependent kin 99.8 4.6E-21 9.9E-26 170.7 -3.5 140 301-447 19-168 (376)
378 PRK10345 hypothetical protein; 99.8 1.4E-18 3E-23 158.0 12.4 135 301-448 4-154 (210)
379 cd05576 STKc_RPK118_like Catal 99.8 9.2E-19 2E-23 163.5 11.6 126 310-448 4-130 (237)
380 KOG0604 MAP kinase-activated p 99.8 1.3E-19 2.9E-24 165.2 4.7 139 298-447 60-208 (400)
381 KOG0587 Traf2- and Nck-interac 99.8 9.2E-19 2E-23 179.6 11.4 146 295-447 15-167 (953)
382 cd07851 STKc_p38 Catalytic dom 99.8 7.2E-19 1.6E-23 173.5 9.9 142 297-447 13-162 (343)
383 cd07854 STKc_MAPK4_6 Catalytic 99.8 1.1E-18 2.4E-23 172.2 10.8 139 299-447 5-159 (342)
384 KOG0696 Serine/threonine prote 99.8 1.8E-19 4E-24 170.5 3.7 144 297-447 347-494 (683)
385 KOG0200 Fibroblast/platelet-de 99.8 1.8E-18 4E-23 182.1 11.3 150 295-447 292-462 (609)
386 KOG1006 Mitogen-activated prot 99.8 8.4E-20 1.8E-24 163.9 -0.6 144 301-447 66-212 (361)
387 KOG0695 Serine/threonine prote 99.7 9.4E-19 2E-23 161.7 6.0 145 296-447 247-395 (593)
388 PHA02882 putative serine/threo 99.7 1.3E-17 2.7E-22 161.1 12.8 142 298-447 11-170 (294)
389 smart00221 STYKc Protein kinas 99.7 2.5E-17 5.4E-22 151.5 13.6 141 301-447 1-142 (225)
390 cd00180 PKc Catalytic domain o 99.7 5.3E-17 1.1E-21 146.9 14.5 135 307-447 1-137 (215)
391 KOG0576 Mitogen-activated prot 99.7 8.1E-19 1.8E-23 175.0 2.1 143 297-447 13-156 (829)
392 KOG0983 Mitogen-activated prot 99.7 9.2E-18 2E-22 151.5 8.0 139 303-447 96-236 (391)
393 KOG0668 Casein kinase II, alph 99.7 2.4E-18 5.1E-23 151.5 3.2 136 298-447 37-177 (338)
394 KOG0664 Nemo-like MAPK-related 99.7 1E-18 2.3E-23 157.4 0.7 138 302-447 56-200 (449)
395 smart00090 RIO RIO-like kinase 99.7 3.2E-17 7E-22 152.5 10.1 136 300-447 29-192 (237)
396 KOG0614 cGMP-dependent protein 99.7 1.4E-18 2.9E-23 168.5 0.5 143 298-447 419-564 (732)
397 PRK14879 serine/threonine prot 99.7 6.9E-17 1.5E-21 148.1 11.6 130 305-447 2-138 (211)
398 smart00220 S_TKc Serine/Threon 99.7 1E-16 2.2E-21 148.8 12.5 130 311-447 1-131 (244)
399 PLN03225 Serine/threonine-prot 99.7 3.5E-17 7.6E-22 170.8 9.2 143 297-447 130-300 (566)
400 KOG1290 Serine/threonine prote 99.7 6.3E-17 1.4E-21 156.5 9.4 134 299-439 78-224 (590)
401 KOG1027 Serine/threonine prote 99.7 2.9E-17 6.2E-22 168.0 7.3 138 301-447 511-655 (903)
402 TIGR03724 arch_bud32 Kae1-asso 99.7 1.3E-16 2.8E-21 144.9 10.4 126 306-447 1-133 (199)
403 KOG1345 Serine/threonine kinas 99.7 2.7E-17 5.8E-22 148.4 5.6 139 299-447 24-167 (378)
404 cd05144 RIO2_C RIO kinase fami 99.7 1.3E-16 2.8E-21 144.9 10.1 131 301-448 17-170 (198)
405 PRK10359 lipopolysaccharide co 99.7 1.6E-16 3.4E-21 145.2 9.2 134 297-447 29-178 (232)
406 PRK09605 bifunctional UGMP fam 99.7 2.8E-16 6E-21 163.9 12.3 132 299-447 333-471 (535)
407 PRK12274 serine/threonine prot 99.7 4.8E-16 1E-20 139.1 11.2 126 303-447 6-136 (218)
408 KOG0603 Ribosomal protein S6 k 99.6 1.5E-16 3.3E-21 159.1 7.2 137 298-447 321-460 (612)
409 KOG0596 Dual specificity; seri 99.6 3.7E-16 7.9E-21 153.4 8.7 141 299-447 361-503 (677)
410 KOG1024 Receptor-like protein 99.6 7.6E-16 1.6E-20 145.4 9.2 153 291-446 276-439 (563)
411 PLN03150 hypothetical protein; 99.6 8.3E-16 1.8E-20 162.3 10.4 117 96-212 419-537 (623)
412 PLN00113 leucine-rich repeat r 99.6 7.2E-16 1.6E-20 172.4 10.4 153 51-204 420-585 (968)
413 KOG1167 Serine/threonine prote 99.6 1.2E-15 2.5E-20 145.7 8.3 140 295-447 32-177 (418)
414 cd05120 APH_ChoK_like Aminogly 99.6 7.9E-15 1.7E-19 126.0 10.7 129 304-447 3-133 (155)
415 KOG0665 Jun-N-terminal kinase 99.6 1.1E-15 2.4E-20 141.0 5.5 138 300-448 18-163 (369)
416 cd05119 RIO RIO kinase family, 99.6 3.7E-15 8.1E-20 133.8 7.6 130 304-447 2-158 (187)
417 KOG1163 Casein kinase (serine/ 99.6 9.2E-15 2E-19 130.0 8.1 140 298-447 14-158 (341)
418 KOG1164 Casein kinase (serine/ 99.5 2.5E-14 5.4E-19 139.8 10.9 141 300-447 19-171 (322)
419 KOG0617 Ras suppressor protein 99.5 1.6E-16 3.5E-21 134.2 -4.0 148 37-187 34-193 (264)
420 KOG1165 Casein kinase (serine/ 99.5 3.4E-14 7.4E-19 131.9 9.8 139 299-447 28-173 (449)
421 KOG0671 LAMMER dual specificit 99.5 2.1E-14 4.5E-19 135.6 7.5 134 298-439 88-228 (415)
422 PRK01723 3-deoxy-D-manno-octul 99.5 9.5E-14 2.1E-18 129.5 11.8 131 304-447 36-186 (239)
423 KOG0617 Ras suppressor protein 99.5 6E-16 1.3E-20 130.8 -3.3 113 87-201 48-161 (264)
424 COG0515 SPS1 Serine/threonine 99.5 1.8E-13 4E-18 131.9 13.6 142 301-448 2-147 (384)
425 KOG0472 Leucine-rich repeat pr 99.5 2E-15 4.3E-20 143.1 -2.5 111 86-201 197-308 (565)
426 PLN03150 hypothetical protein; 99.5 1.5E-13 3.3E-18 145.2 11.4 113 72-184 419-532 (623)
427 TIGR01982 UbiB 2-polyprenylphe 99.4 8.1E-13 1.8E-17 133.7 9.2 138 300-447 119-301 (437)
428 KOG1166 Mitotic checkpoint ser 99.4 2.4E-13 5.3E-18 145.2 5.5 144 293-447 692-845 (974)
429 KOG0670 U4/U6-associated splic 99.4 8.9E-13 1.9E-17 128.8 6.8 143 298-447 431-581 (752)
430 KOG0444 Cytoskeletal regulator 99.3 7.3E-14 1.6E-18 139.0 -3.0 112 87-201 214-327 (1255)
431 KOG4194 Membrane glycoprotein 99.3 2.3E-13 4.9E-18 134.7 -0.0 169 32-200 193-402 (873)
432 KOG0444 Cytoskeletal regulator 99.3 5.7E-13 1.2E-17 132.8 0.9 137 41-180 37-186 (1255)
433 PRK04750 ubiB putative ubiquin 99.2 5.8E-12 1.3E-16 129.2 5.6 139 298-447 119-308 (537)
434 KOG0195 Integrin-linked kinase 99.2 3.9E-12 8.5E-17 115.2 3.4 137 305-445 196-333 (448)
435 KOG0472 Leucine-rich repeat pr 99.2 2.6E-12 5.6E-17 122.2 1.4 112 88-201 428-539 (565)
436 cd05151 ChoK Choline Kinase (C 99.2 3.9E-11 8.6E-16 105.7 8.7 126 304-447 3-131 (170)
437 KOG4194 Membrane glycoprotein 99.2 2.2E-12 4.7E-17 127.9 -1.2 163 22-184 230-433 (873)
438 PLN00181 protein SPA1-RELATED; 99.1 3E-11 6.4E-16 132.3 4.1 88 353-447 29-124 (793)
439 cd05154 ACAD10_11_like Acyl-Co 99.1 4.3E-10 9.3E-15 103.5 11.2 138 305-447 4-201 (223)
440 KOG1240 Protein kinase contain 99.1 1.4E-11 3.1E-16 130.1 0.5 139 300-448 24-165 (1431)
441 KOG0532 Leucine-rich repeat (L 99.1 2.9E-12 6.3E-17 126.7 -4.7 147 35-186 97-253 (722)
442 KOG0618 Serine/threonine phosp 99.1 1.6E-11 3.4E-16 127.7 0.3 168 31-201 305-487 (1081)
443 KOG0603 Ribosomal protein S6 k 99.1 3.1E-11 6.7E-16 121.4 1.2 136 306-448 1-142 (612)
444 KOG0590 Checkpoint kinase and 99.1 6.3E-11 1.4E-15 123.9 3.2 139 302-448 321-465 (601)
445 KOG4158 BRPK/PTEN-induced prot 99.0 1.4E-10 3E-15 110.6 4.6 86 353-447 273-389 (598)
446 cd05146 RIO3_euk RIO kinase fa 99.0 1.2E-09 2.5E-14 97.9 9.6 132 305-449 3-170 (197)
447 PRK15387 E3 ubiquitin-protein 99.0 3.4E-10 7.4E-15 120.4 5.5 60 120-184 403-462 (788)
448 PF14531 Kinase-like: Kinase-l 98.9 4.1E-09 8.8E-14 99.6 9.7 141 303-447 16-189 (288)
449 KOG0532 Leucine-rich repeat (L 98.9 1.7E-10 3.7E-15 114.4 -0.7 164 33-202 72-246 (722)
450 PRK15387 E3 ubiquitin-protein 98.9 1.6E-09 3.5E-14 115.4 6.4 53 144-201 403-456 (788)
451 PF14580 LRR_9: Leucine-rich r 98.9 1.6E-09 3.5E-14 95.1 4.7 89 90-181 36-127 (175)
452 PLN03210 Resistant to P. syrin 98.9 5.5E-09 1.2E-13 118.5 8.9 164 36-200 611-835 (1153)
453 PF13855 LRR_8: Leucine rich r 98.8 2E-09 4.2E-14 77.8 2.9 60 96-155 2-61 (61)
454 PRK15370 E3 ubiquitin-protein 98.8 3.9E-09 8.5E-14 112.8 6.0 131 38-180 201-359 (754)
455 PRK15370 E3 ubiquitin-protein 98.8 2.5E-09 5.3E-14 114.4 3.8 150 37-200 221-398 (754)
456 PF13855 LRR_8: Leucine rich r 98.8 2E-09 4.3E-14 77.7 2.2 61 119-179 1-61 (61)
457 KOG0618 Serine/threonine phosp 98.8 3.2E-10 6.9E-15 118.2 -3.9 159 38-200 243-462 (1081)
458 PRK15123 lipopolysaccharide co 98.8 9E-08 1.9E-12 90.5 12.6 136 306-447 29-189 (268)
459 PLN03210 Resistant to P. syrin 98.8 1.9E-08 4.1E-13 114.2 9.0 121 75-200 782-903 (1153)
460 COG3642 Mn2+-dependent serine/ 98.7 1.6E-07 3.4E-12 81.8 10.4 127 305-447 2-135 (204)
461 PF14580 LRR_9: Leucine-rich r 98.7 1.2E-08 2.7E-13 89.6 3.6 107 90-201 14-124 (175)
462 KOG1259 Nischarin, modulator o 98.7 4.4E-09 9.6E-14 97.0 0.7 120 76-201 289-410 (490)
463 KOG3087 Serine/threonine prote 98.7 2.3E-07 5E-12 80.5 10.7 138 303-447 11-160 (229)
464 KOG1259 Nischarin, modulator o 98.6 2.5E-09 5.4E-14 98.6 -2.0 103 76-183 312-415 (490)
465 PF01163 RIO1: RIO1 family; I 98.6 1.9E-07 4E-12 83.4 9.6 122 314-449 1-152 (188)
466 cd00116 LRR_RI Leucine-rich re 98.6 1.1E-08 2.3E-13 99.7 1.5 108 74-181 84-207 (319)
467 KOG1023 Natriuretic peptide re 98.6 5.8E-08 1.3E-12 97.7 6.3 92 350-447 1-93 (484)
468 COG4886 Leucine-rich repeat (L 98.5 3.1E-08 6.6E-13 99.8 2.4 129 35-179 115-244 (394)
469 KOG0601 Cyclin-dependent kinas 98.5 5.6E-08 1.2E-12 98.0 4.1 145 297-448 263-412 (524)
470 COG4886 Leucine-rich repeat (L 98.5 3.9E-08 8.4E-13 99.0 2.0 124 74-201 119-243 (394)
471 cd00116 LRR_RI Leucine-rich re 98.5 4.2E-08 9E-13 95.6 1.5 144 37-180 82-263 (319)
472 KOG0590 Checkpoint kinase and 98.5 4.8E-08 1.1E-12 102.4 1.7 143 300-448 21-170 (601)
473 KOG1266 Protein kinase [Signal 98.4 1.2E-07 2.5E-12 88.9 3.1 95 350-445 121-220 (458)
474 KOG1243 Protein kinase [Genera 98.4 7.3E-07 1.6E-11 91.1 9.1 116 320-447 34-149 (690)
475 KOG4237 Extracellular matrix p 98.4 3.3E-08 7.2E-13 94.5 -0.5 136 74-209 70-207 (498)
476 KOG4237 Extracellular matrix p 98.4 1.4E-07 3.1E-12 90.3 3.1 90 91-180 270-359 (498)
477 PF06293 Kdo: Lipopolysacchari 98.4 1.5E-06 3.3E-11 79.2 9.7 99 342-447 57-165 (206)
478 PRK09902 hypothetical protein; 98.4 5.7E-06 1.2E-10 74.5 12.6 134 307-447 26-174 (216)
479 COG0478 RIO-like serine/threon 98.4 1.5E-06 3.3E-11 80.2 8.6 131 303-449 95-248 (304)
480 KOG1859 Leucine-rich repeat pr 98.2 3E-08 6.6E-13 101.2 -6.2 128 61-206 166-295 (1096)
481 KOG3741 Poly(A) ribonuclease s 98.2 6.3E-06 1.4E-10 82.0 9.9 128 313-444 290-434 (655)
482 KOG0606 Microtubule-associated 98.2 1.6E-06 3.5E-11 92.5 4.7 105 298-447 82-187 (1205)
483 KOG4579 Leucine-rich repeat (L 98.2 4E-08 8.7E-13 80.7 -5.7 88 90-180 48-136 (177)
484 KOG4579 Leucine-rich repeat (L 98.1 1.8E-07 3.9E-12 77.0 -2.4 110 72-185 54-164 (177)
485 KOG3207 Beta-tubulin folding c 98.1 5.5E-07 1.2E-11 87.3 0.4 138 31-180 141-284 (505)
486 COG0661 AarF Predicted unusual 98.1 1E-05 2.3E-10 82.9 9.0 139 299-447 126-309 (517)
487 PF12799 LRR_4: Leucine Rich r 98.0 3.6E-06 7.8E-11 56.0 2.6 36 96-132 2-37 (44)
488 TIGR02172 Fb_sc_TIGR02172 Fibr 98.0 6.5E-05 1.4E-09 69.4 12.0 73 304-382 6-80 (226)
489 KOG1859 Leucine-rich repeat pr 98.0 3.8E-07 8.2E-12 93.4 -3.5 116 47-180 175-292 (1096)
490 PF12799 LRR_4: Leucine Rich r 98.0 4.3E-06 9.4E-11 55.6 2.3 36 120-156 2-37 (44)
491 KOG0601 Cyclin-dependent kinas 97.9 9.6E-06 2.1E-10 82.1 5.0 140 301-447 116-267 (524)
492 KOG1235 Predicted unusual prot 97.9 3.8E-05 8.1E-10 78.7 8.9 133 305-447 167-349 (538)
493 smart00750 KIND kinase non-cat 97.9 1.8E-05 4E-10 69.7 5.8 52 381-444 1-52 (176)
494 PF12260 PIP49_C: Protein-kina 97.9 4.6E-05 1E-09 68.2 7.5 99 344-447 7-106 (188)
495 PLN02876 acyl-CoA dehydrogenas 97.9 0.00012 2.6E-09 80.6 12.4 79 304-382 43-130 (822)
496 PF10707 YrbL-PhoP_reg: PhoP r 97.8 0.00025 5.5E-09 63.8 12.1 124 303-440 5-155 (199)
497 PRK10593 hypothetical protein; 97.8 0.00033 7.1E-09 67.6 12.3 78 302-383 17-100 (297)
498 PF06176 WaaY: Lipopolysacchar 97.7 0.0001 2.3E-09 66.7 7.8 132 298-447 30-178 (229)
499 cd05150 APH Aminoglycoside 3'- 97.7 0.00021 4.6E-09 66.8 10.3 74 307-385 6-81 (244)
500 KOG4658 Apoptotic ATPase [Sign 97.6 2.8E-05 6E-10 85.0 2.7 91 87-178 562-653 (889)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=5.2e-46 Score=414.13 Aligned_cols=358 Identities=30% Similarity=0.535 Sum_probs=274.5
Q ss_pred hhhhhhhhhccCCCcce-----------EEEeecCCccccccCCccccCCCCCCEEeCcCCccCccCCccccCCCCCcEE
Q 013004 56 SFLIFIRVLQSSSNLFV-----------YLISDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSL 124 (451)
Q Consensus 56 ~~~~~~~~l~~~~n~~~-----------~~~~~l~~n~~~g~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L 124 (451)
..++.|+.|++++|.+. +..++|++|.++|.+|..+..+++|+.|+|++|++++.+|..++.+++|+.|
T Consensus 449 ~~l~~L~~L~L~~n~~~~~~p~~~~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 528 (968)
T PLN00113 449 WDMPSLQMLSLARNKFFGGLPDSFGSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSL 528 (968)
T ss_pred ccCCCCcEEECcCceeeeecCcccccccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEE
Confidence 44566777777777654 3457889999999999999999999999999999999999999999999999
Q ss_pred eCCCCcCCccCcccccCCcccceeeccccccCCCChhhhhcCCCCCeeccCCccccCcCCCCCCCCcccccccccccccC
Q 013004 125 DLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPDNGSFSQFTPISFENNLNLC 204 (451)
Q Consensus 125 ~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lC 204 (451)
++++|.++|.+|..++.+++|+.|+|++|+++|.+|..+..+++|+.|++++|+++|.+|..+.+..+....+.+|+.+|
T Consensus 529 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lc 608 (968)
T PLN00113 529 DLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPSTGAFLAINASAVAGNIDLC 608 (968)
T ss_pred ECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCcceeeCCCcchhcccChhhhcCCcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCC---CCCCCCCCCCCCCCCCCCCCCCCCCcccceehhhhhhHHhhhhhhhhhhhhhhcCCCCccccCCCCCc-hh
Q 013004 205 GPNTKK---PCSGSPPFSPPPPFGPTSSPGRNKSNAAIPVGVALGAALLFAVPVIGFAYWRRTRPHEFFFDVPAEDD-SE 280 (451)
Q Consensus 205 g~~~~~---~c~~s~~~s~~~~~~~~~~~~~~~~~~~i~~~v~vg~~~~~~~~~i~~~~~rrrr~~~~~~~~~~~~~-~~ 280 (451)
|+.... +|.. .+......+.+++++++++++++++++++++++++..+.. ..+.+.. .+
T Consensus 609 ~~~~~~~~~~c~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 671 (968)
T PLN00113 609 GGDTTSGLPPCKR----------------VRKTPSWWFYITCTLGAFLVLALVAFGFVFIRGRNNLELK-RVENEDGTWE 671 (968)
T ss_pred CCccccCCCCCcc----------------ccccceeeeehhHHHHHHHHHHHHHHHHHHHHhhhccccc-cccccccccc
Confidence 865321 1210 0011111222222333333322233333333333221110 0000000 01
Q ss_pred hhc---CccccccHHHHHHHhcCCCCCCccCccCCceEEEEEe-CCCCEEEEEEcccccccccHHHHHHHHHHHhcCCCC
Q 013004 281 LQL---GQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHR 356 (451)
Q Consensus 281 ~~~---~~~~~~~~~~~~~~~~~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~ 356 (451)
... .....++++++ ...|+..++||+|+||.||+|+. .+++.||||+++.... ...+|++.+++++||
T Consensus 672 ~~~~~~~~~~~~~~~~~---~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~l~~l~Hp 743 (968)
T PLN00113 672 LQFFDSKVSKSITINDI---LSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS-----IPSSEIADMGKLQHP 743 (968)
T ss_pred ccccccccchhhhHHHH---HhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc-----ccHHHHHHHhhCCCC
Confidence 000 00112233333 34577889999999999999986 5789999999864321 123568889999999
Q ss_pred CccceeeEEecCCeeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceee
Q 013004 357 NLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILL 436 (451)
Q Consensus 357 niv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILl 436 (451)
|||+++++|.+.+..++||||+++|+|.++++. ++|.++..++.|+|+||+|||+.+.++|+|||+||+||++
T Consensus 744 nIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~-------l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~ 816 (968)
T PLN00113 744 NIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLRN-------LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIII 816 (968)
T ss_pred CcceEEEEEEcCCCCEEEEeCCCCCcHHHHHhc-------CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEE
Confidence 999999999999999999999999999999952 7899999999999999999998777899999999999999
Q ss_pred CCCCCccch
Q 013004 437 DEDADQSSK 445 (451)
Q Consensus 437 d~~~~~~i~ 445 (451)
|.++.+++.
T Consensus 817 ~~~~~~~~~ 825 (968)
T PLN00113 817 DGKDEPHLR 825 (968)
T ss_pred CCCCceEEE
Confidence 998887764
No 2
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-36 Score=295.18 Aligned_cols=160 Identities=53% Similarity=0.915 Sum_probs=148.0
Q ss_pred ccccccHHHHHHHhcCCCCCCccCccCCceEEEEEeCCCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeE
Q 013004 285 QLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGF 364 (451)
Q Consensus 285 ~~~~~~~~~~~~~~~~f~~~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~ 364 (451)
..+.|++.++..+|++|...+.||+|+||.||+|...+++.||||++....... ..+|.+|+.++++++|||+|+|+||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~-~~eF~~Ei~~ls~l~H~Nlv~LlGy 139 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQG-EREFLNEVEILSRLRHPNLVKLLGY 139 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcc-hhHHHHHHHHHhcCCCcCcccEEEE
Confidence 456799999999999999999999999999999999999999999886654332 4579999999999999999999999
Q ss_pred EecCC-eeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCcc
Q 013004 365 CTTVT-EKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQS 443 (451)
Q Consensus 365 ~~~~~-~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~ 443 (451)
|.+.+ +.+||||||++|+|.++|+..... +++|.+|++||.++|+||+|||+.+.|+||||||||+|||+|+|+++|
T Consensus 140 C~e~~~~~~LVYEym~nGsL~d~L~~~~~~--~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aK 217 (361)
T KOG1187|consen 140 CLEGGEHRLLVYEYMPNGSLEDHLHGKKGE--PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAK 217 (361)
T ss_pred EecCCceEEEEEEccCCCCHHHHhCCCCCC--CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEE
Confidence 99998 599999999999999999986543 689999999999999999999999999999999999999999999999
Q ss_pred chhh
Q 013004 444 SKTI 447 (451)
Q Consensus 444 i~df 447 (451)
|+||
T Consensus 218 lsDF 221 (361)
T KOG1187|consen 218 LSDF 221 (361)
T ss_pred ccCc
Confidence 9998
No 3
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.97 E-value=5.7e-30 Score=241.83 Aligned_cols=143 Identities=29% Similarity=0.426 Sum_probs=126.8
Q ss_pred hcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEccccc-ccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEE
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEER-TSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 375 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (451)
..+|...+.||+|+||+||+|+++ ++..||||.+.+.. ..........|+++++.++|||||++++++..++..|+||
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVM 88 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVM 88 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEE
Confidence 457888888999999999999974 58899999996553 2223345789999999999999999999999999999999
Q ss_pred ecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCC------CCccchhh
Q 013004 376 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDED------ADQSSKTI 447 (451)
Q Consensus 376 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~------~~~~i~df 447 (451)
|||.||||.++++.++ .+++..+..++.|+|.||++||++ +||||||||+|||++.. -..||+||
T Consensus 89 EyC~gGDLs~yi~~~~----~l~e~t~r~Fm~QLA~alq~L~~~---~IiHRDLKPQNiLLs~~~~~~~~~~LKIADF 159 (429)
T KOG0595|consen 89 EYCNGGDLSDYIRRRG----RLPEATARHFMQQLASALQFLHEN---NIIHRDLKPQNILLSTTARNDTSPVLKIADF 159 (429)
T ss_pred EeCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCcceEEeccCCCCCCCceEEeccc
Confidence 9999999999999875 389999999999999999999999 99999999999999986 34689998
No 4
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=99.95 E-value=5.6e-28 Score=236.21 Aligned_cols=141 Identities=35% Similarity=0.583 Sum_probs=123.5
Q ss_pred CCCCccCccCCceEEEEEeCCCCEEEEEEcccccccc-cHHHHHHHHHHHhcCCCCCccceeeEEecCC-eeeEEEecCC
Q 013004 302 SNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHRNLLRLYGFCTTVT-EKLLVYPYMT 379 (451)
Q Consensus 302 ~~~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~~lv~ey~~ 379 (451)
...+.+|+|+||+||+|.++....||||++....... ...+|.+|+.+|.+++|||||+++|+|.+.. ...+|||||+
T Consensus 44 ~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~ 123 (362)
T KOG0192|consen 44 PIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMP 123 (362)
T ss_pred hhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCC
Confidence 3345699999999999999654459999996543222 2458999999999999999999999999987 7999999999
Q ss_pred CCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCC-eeecCCCCCceeeCCCC-Cccchhh
Q 013004 380 NGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPK-IIHRDVKAANILLDEDA-DQSSKTI 447 (451)
Q Consensus 380 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~-iiHrDlK~~NILld~~~-~~~i~df 447 (451)
+|+|.++++.. ....++|..+..++.|||+||.|||++ + ||||||||+|||++.++ .+||+||
T Consensus 124 ~GsL~~~l~~~--~~~~l~~~~~l~~aldiArGm~YLH~~---~~iIHrDLK~~NiLv~~~~~~~KI~DF 188 (362)
T KOG0192|consen 124 GGSLSVLLHKK--RKRKLPLKVRLRIALDIARGMEYLHSE---GPIIHRDLKSDNILVDLKGKTLKIADF 188 (362)
T ss_pred CCcHHHHHhhc--ccCCCCHHHHHHHHHHHHHHHHHHhcC---CCeeecccChhhEEEcCCCCEEEECCC
Confidence 99999999874 223599999999999999999999998 6 99999999999999997 9999998
No 5
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=99.95 E-value=4.2e-28 Score=229.00 Aligned_cols=143 Identities=27% Similarity=0.421 Sum_probs=124.5
Q ss_pred hcCCCCCCccCccCCceEEEEE-eCCCCEEEEEEcccccccc------cHHHHHHHHHHHhcCCCCCccceeeEEecCCe
Q 013004 298 TDGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLKEERTSG------GELQFQTEVKIISMAVHRNLLRLYGFCTTVTE 370 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~-~~~~~~vAvK~~~~~~~~~------~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 370 (451)
.+.|...+.+|+|+||.|-+|. .++|+.||||++++..... ......+|+++|++++|||||++++++..++.
T Consensus 171 ~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds 250 (475)
T KOG0615|consen 171 NDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDS 250 (475)
T ss_pred cceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCc
Confidence 3456677899999999999997 4679999999997543222 12235799999999999999999999999999
Q ss_pred eeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCC---CCccchhh
Q 013004 371 KLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDED---ADQSSKTI 447 (451)
Q Consensus 371 ~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~---~~~~i~df 447 (451)
.||||||++||+|.+++...+. +.+...+.++.|++.|+.|||+. ||+||||||+|||+..+ ...||+||
T Consensus 251 ~YmVlE~v~GGeLfd~vv~nk~----l~ed~~K~~f~Qll~avkYLH~~---GI~HRDiKPeNILl~~~~e~~llKItDF 323 (475)
T KOG0615|consen 251 SYMVLEYVEGGELFDKVVANKY----LREDLGKLLFKQLLTAVKYLHSQ---GIIHRDIKPENILLSNDAEDCLLKITDF 323 (475)
T ss_pred eEEEEEEecCccHHHHHHhccc----cccchhHHHHHHHHHHHHHHHHc---CcccccCCcceEEeccCCcceEEEeccc
Confidence 9999999999999999987643 77788899999999999999999 99999999999999987 56799988
No 6
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=99.95 E-value=7.8e-28 Score=225.45 Aligned_cols=141 Identities=31% Similarity=0.450 Sum_probs=126.2
Q ss_pred CCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCC-eeeEEEec
Q 013004 300 GFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVT-EKLLVYPY 377 (451)
Q Consensus 300 ~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~~lv~ey 377 (451)
+++..+.||+|..|+||+++++ +++.+|+|.+..........+..+|++++...+||+||+++|.|.... ++.++|||
T Consensus 80 dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEY 159 (364)
T KOG0581|consen 80 DLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEY 159 (364)
T ss_pred HhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhh
Confidence 4455688999999999999875 688999999965544444568999999999999999999999999988 59999999
Q ss_pred CCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhc-CCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 378 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHE-HCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 378 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~-~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|.+|||.+.+...+ ++++...-+|+.+|++||.|||+ . +||||||||+|||++..|++||+||
T Consensus 160 MDgGSLd~~~k~~g----~i~E~~L~~ia~~VL~GL~YLh~~~---~IIHRDIKPsNlLvNskGeVKicDF 223 (364)
T KOG0581|consen 160 MDGGSLDDILKRVG----RIPEPVLGKIARAVLRGLSYLHEER---KIIHRDIKPSNLLVNSKGEVKICDF 223 (364)
T ss_pred cCCCCHHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHhhcc---CeeeccCCHHHeeeccCCCEEeccc
Confidence 99999999998753 38899999999999999999996 5 8999999999999999999999998
No 7
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.95 E-value=2.8e-27 Score=226.98 Aligned_cols=138 Identities=36% Similarity=0.538 Sum_probs=120.1
Q ss_pred CCCCCCccCccCCceEEEEEeCCCCEEEEEEcccccccccHHHHHHHHHHHh--cCCCCCccceeeEEecCC----eeeE
Q 013004 300 GFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIIS--MAVHRNLLRLYGFCTTVT----EKLL 373 (451)
Q Consensus 300 ~f~~~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~--~l~H~niv~l~~~~~~~~----~~~l 373 (451)
..+..+++|+|+||.||+|++. ++.||||++... ....|..|-++.+ .++|+||++++++-...+ +.+|
T Consensus 211 pl~l~eli~~Grfg~V~KaqL~-~~~VAVKifp~~----~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywL 285 (534)
T KOG3653|consen 211 PLQLLELIGRGRFGCVWKAQLD-NRLVAVKIFPEQ----EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWL 285 (534)
T ss_pred chhhHHHhhcCccceeehhhcc-CceeEEEecCHH----HHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeE
Confidence 3445578999999999999994 599999999653 2346777777665 567999999999877655 8899
Q ss_pred EEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcC------CCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 374 VYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEH------CDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 374 v~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~------~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|+||.+.|+|.++|.... .+|....+|+.-+++||+|||+. .+|+|+|||||++|||+.+|+...|+||
T Consensus 286 Vt~fh~kGsL~dyL~~nt-----isw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDF 360 (534)
T KOG3653|consen 286 VTEFHPKGSLCDYLKANT-----ISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADF 360 (534)
T ss_pred EeeeccCCcHHHHHHhcc-----ccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeecc
Confidence 999999999999998763 89999999999999999999974 5889999999999999999999999998
No 8
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=99.95 E-value=6.2e-28 Score=226.05 Aligned_cols=144 Identities=28% Similarity=0.401 Sum_probs=130.0
Q ss_pred HhcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEccccccc--ccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeE
Q 013004 297 ATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS--GGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLL 373 (451)
Q Consensus 297 ~~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 373 (451)
..++|+..++||+|+||+||+++.+ +++.+|+|++++.... .......+|..++..++||.||+++..|++.+.+|+
T Consensus 23 ~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLyl 102 (357)
T KOG0598|consen 23 GPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYL 102 (357)
T ss_pred ChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEE
Confidence 3578999999999999999999854 5899999999765432 234467899999999999999999999999999999
Q ss_pred EEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 374 VYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 374 v~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|+||+.||+|+.+|.+.. .+++..+..++..|+.||.|||+. +||||||||+|||+|++|.+++.||
T Consensus 103 Vld~~~GGeLf~hL~~eg----~F~E~~arfYlaEi~lAL~~LH~~---gIiyRDlKPENILLd~~GHi~LtDF 169 (357)
T KOG0598|consen 103 VLDYLNGGELFYHLQREG----RFSEDRARFYLAEIVLALGYLHSK---GIIYRDLKPENILLDEQGHIKLTDF 169 (357)
T ss_pred EEeccCCccHHHHHHhcC----CcchhHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHeeecCCCcEEEecc
Confidence 999999999999998764 389999999999999999999999 9999999999999999999999998
No 9
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.94 E-value=2e-27 Score=229.60 Aligned_cols=143 Identities=29% Similarity=0.505 Sum_probs=125.7
Q ss_pred hcCCCCCCccCccCCceEEEEE-eCCCCEEEEEEccccccccc-HHHHHHHHHHHhcCCCCCccceeeEEecC--CeeeE
Q 013004 298 TDGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLKEERTSGG-ELQFQTEVKIISMAVHRNLLRLYGFCTTV--TEKLL 373 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~-~~~~~~vAvK~~~~~~~~~~-~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~l 373 (451)
.+.|+.++.||+|.||.||+|+ ..+|+.||+|+++.+....+ .....+||.+|++++|||||+|.+...+. ..+||
T Consensus 116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYl 195 (560)
T KOG0600|consen 116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYL 195 (560)
T ss_pred hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEE
Confidence 3456777899999999999998 46799999999987664443 33568999999999999999999988776 68999
Q ss_pred EEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 374 VYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 374 v~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|+|||+. ||..++.... ..++..+.+.++.|++.||+|+|+. +|+|||||.+|||||.+|..||+||
T Consensus 196 VFeYMdh-DL~GLl~~p~---vkft~~qIKc~mkQLl~Gl~~cH~~---gvlHRDIK~SNiLidn~G~LKiaDF 262 (560)
T KOG0600|consen 196 VFEYMDH-DLSGLLSSPG---VKFTEPQIKCYMKQLLEGLEYCHSR---GVLHRDIKGSNILIDNNGVLKIADF 262 (560)
T ss_pred EEecccc-hhhhhhcCCC---cccChHHHHHHHHHHHHHHHHHhhc---CeeeccccccceEEcCCCCEEeccc
Confidence 9999987 8888886542 3489999999999999999999999 9999999999999999999999998
No 10
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.94 E-value=4.1e-27 Score=232.76 Aligned_cols=142 Identities=28% Similarity=0.494 Sum_probs=129.4
Q ss_pred cCCCCCCccCccCCceEEEEEe-CCCCEEEEEEcccccc--cccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEE
Q 013004 299 DGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERT--SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 375 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (451)
..|...++||+|+|++||.++. .+|+.||+|++.+..- ........+|+++.+.++|||||+++++|++.+.+|+|.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 4588889999999999999997 7899999999965432 233446889999999999999999999999999999999
Q ss_pred ecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 376 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 376 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|+|++|+|.++++.+. +++++++..+..||+.||.|||++ +|||||||..|++++++.++||+||
T Consensus 98 ELC~~~sL~el~Krrk----~ltEpEary~l~QIv~GlkYLH~~---~IiHRDLKLGNlfL~~~~~VKIgDF 162 (592)
T KOG0575|consen 98 ELCHRGSLMELLKRRK----PLTEPEARYFLRQIVEGLKYLHSL---GIIHRDLKLGNLFLNENMNVKIGDF 162 (592)
T ss_pred EecCCccHHHHHHhcC----CCCcHHHHHHHHHHHHHHHHHHhc---CceecccchhheeecCcCcEEeccc
Confidence 9999999999998543 499999999999999999999999 9999999999999999999999998
No 11
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=99.94 E-value=1.8e-27 Score=232.77 Aligned_cols=140 Identities=35% Similarity=0.531 Sum_probs=126.4
Q ss_pred CCCCCccCccCCceEEEEEeCCCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEecCCC
Q 013004 301 FSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTN 380 (451)
Q Consensus 301 f~~~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~ 380 (451)
++..+.||+|-||+||.|.+.....||+|.++... ....+|.+|+.+|.+++|+|||+++|+|...+.++||||||+.
T Consensus 208 l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~--m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~ 285 (468)
T KOG0197|consen 208 LKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGS--MSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPK 285 (468)
T ss_pred HHHHHHhcCCccceEEEEEEcCCCcccceEEeccc--cChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEeccc
Confidence 34457799999999999999877799999997652 2335799999999999999999999999998899999999999
Q ss_pred CChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 381 GSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 381 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|+|.++|+...+ ..+...+.+.++.|||+||+||+++ ++|||||.++|||++++..+||+||
T Consensus 286 GsLl~yLr~~~~--~~l~~~~Ll~~a~qIaeGM~YLes~---~~IHRDLAARNiLV~~~~~vKIsDF 347 (468)
T KOG0197|consen 286 GSLLDYLRTREG--GLLNLPQLLDFAAQIAEGMAYLESK---NYIHRDLAARNILVDEDLVVKISDF 347 (468)
T ss_pred CcHHHHhhhcCC--CccchHHHHHHHHHHHHHHHHHHhC---CccchhhhhhheeeccCceEEEccc
Confidence 999999998433 3488899999999999999999999 9999999999999999999999998
No 12
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=99.94 E-value=9.1e-27 Score=208.56 Aligned_cols=142 Identities=27% Similarity=0.465 Sum_probs=127.7
Q ss_pred cCCCCCCccCccCCceEEEEEe-CCCCEEEEEEccccccccc-HHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEe
Q 013004 299 DGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGG-ELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 376 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~~~-~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 376 (451)
++|...+.+|+|.||.||+|+. .+|+.||||+++.....++ .....||+..++.++|+||+.++++|...+...+|+|
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE 81 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE 81 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence 3567778999999999999985 6799999999987654444 3468999999999999999999999999999999999
Q ss_pred cCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 377 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 377 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
||+. ||+..+++... .++-.+.+.++.++.+|++|+|++ .|+||||||.|+|++++|..|++||
T Consensus 82 fm~t-dLe~vIkd~~i---~l~pa~iK~y~~m~LkGl~y~H~~---~IlHRDlKPnNLLis~~g~lKiADF 145 (318)
T KOG0659|consen 82 FMPT-DLEVVIKDKNI---ILSPADIKSYMLMTLKGLAYCHSK---WILHRDLKPNNLLISSDGQLKIADF 145 (318)
T ss_pred eccc-cHHHHhccccc---ccCHHHHHHHHHHHHHHHHHHHhh---hhhcccCCccceEEcCCCcEEeecc
Confidence 9986 99999987643 478899999999999999999999 8999999999999999999999998
No 13
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=99.93 E-value=3.2e-26 Score=223.09 Aligned_cols=146 Identities=21% Similarity=0.342 Sum_probs=131.4
Q ss_pred HHHhcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccc--cccHHHHHHHHHHHhcCCCCCccceeeEEecCCee
Q 013004 295 QVATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEK 371 (451)
Q Consensus 295 ~~~~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 371 (451)
....++|+.+.+||+|+||.||.|+-+ +|..+|+|++++... ..+....+.|..+|....+|+||+|+..|++.+.+
T Consensus 137 r~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~L 216 (550)
T KOG0605|consen 137 RLSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYL 216 (550)
T ss_pred cCCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCee
Confidence 345689999999999999999999854 699999999976432 22334578899999999999999999999999999
Q ss_pred eEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 372 LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 372 ~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
||||||++|||+..+|...+. |++..+..++.+++.|++.+|.. |+|||||||+|+|||..|.+|++||
T Consensus 217 YLiMEylPGGD~mTLL~~~~~----L~e~~arfYiaE~vlAI~~iH~~---gyIHRDIKPdNlLiD~~GHiKLSDF 285 (550)
T KOG0605|consen 217 YLIMEYLPGGDMMTLLMRKDT----LTEDWARFYIAETVLAIESIHQL---GYIHRDIKPDNLLIDAKGHIKLSDF 285 (550)
T ss_pred EEEEEecCCccHHHHHHhcCc----CchHHHHHHHHHHHHHHHHHHHc---CcccccCChhheeecCCCCEeeccc
Confidence 999999999999999987654 88999999999999999999999 9999999999999999999999998
No 14
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=99.93 E-value=6.6e-27 Score=220.03 Aligned_cols=141 Identities=23% Similarity=0.455 Sum_probs=128.3
Q ss_pred CCCCCCccCccCCceEEEEEe-CCCCEEEEEEccccccccc--HHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEe
Q 013004 300 GFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGG--ELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 376 (451)
Q Consensus 300 ~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 376 (451)
+|+..+.||+|.||+|-+|.. ..|+.||||.+++....+. ....++|+++|+.++||||+.++++|...+.+.+|||
T Consensus 54 RyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivME 133 (668)
T KOG0611|consen 54 RYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVME 133 (668)
T ss_pred HHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEEE
Confidence 455567899999999999974 6799999999977654332 3468999999999999999999999999999999999
Q ss_pred cCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 377 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 377 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|..+|.|++++.+++. +++.++..+..||..|+.|+|.+ +++|||||.+|||+|+|+++||+||
T Consensus 134 YaS~GeLYDYiSer~~----LsErEaRhfFRQIvSAVhYCHkn---rVvHRDLKLENILLD~N~NiKIADF 197 (668)
T KOG0611|consen 134 YASGGELYDYISERGS----LSEREARHFFRQIVSAVHYCHKN---RVVHRDLKLENILLDQNNNIKIADF 197 (668)
T ss_pred ecCCccHHHHHHHhcc----ccHHHHHHHHHHHHHHHHHHhhc---cceecccchhheeecCCCCeeeecc
Confidence 9999999999988754 89999999999999999999999 9999999999999999999999998
No 15
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=99.93 E-value=8.4e-27 Score=212.23 Aligned_cols=142 Identities=23% Similarity=0.360 Sum_probs=121.1
Q ss_pred cCCCCCCccCccCCceEEEEEeC-CCCEEEEEEccccccccc-HHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEe
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGG-ELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 376 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~-~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 376 (451)
+.|+....+|+|+||.||+|+.+ +|+.||||++.....+.. ..-.+||+++++.++|+|+|.++++|.....+++|+|
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE 81 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE 81 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence 35677788999999999999975 599999999965432222 2247899999999999999999999999999999999
Q ss_pred cCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 377 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 377 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
||+. ++.+.|..... .++.....+++.|++.|+.|+|++ ++|||||||+|||++.++.+|++||
T Consensus 82 ~~dh-TvL~eLe~~p~---G~~~~~vk~~l~Q~l~ai~~cHk~---n~IHRDIKPENILit~~gvvKLCDF 145 (396)
T KOG0593|consen 82 YCDH-TVLHELERYPN---GVPSELVKKYLYQLLKAIHFCHKN---NCIHRDIKPENILITQNGVVKLCDF 145 (396)
T ss_pred ecch-HHHHHHHhccC---CCCHHHHHHHHHHHHHHhhhhhhc---CeecccCChhheEEecCCcEEeccc
Confidence 9987 44444544332 277888999999999999999999 9999999999999999999999998
No 16
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.93 E-value=1.8e-26 Score=236.41 Aligned_cols=148 Identities=32% Similarity=0.522 Sum_probs=131.0
Q ss_pred HhcCCCCCCccCccCCceEEEEEeC------CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCe
Q 013004 297 ATDGFSNKNILGRGGFGKVYKGRLA------DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTE 370 (451)
Q Consensus 297 ~~~~f~~~~~lG~G~fg~Vy~~~~~------~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 370 (451)
.+.+....+.||+|+||+||+|+.. +.+.||||.++.....+...+|++|+++++.++|||||+|+|+|.+++.
T Consensus 484 ~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P 563 (774)
T KOG1026|consen 484 PRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDP 563 (774)
T ss_pred chhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCe
Confidence 3445566788999999999999853 3568999999887666566789999999999999999999999999999
Q ss_pred eeEEEecCCCCChhHHhhccCCC----------CCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCC
Q 013004 371 KLLVYPYMTNGSVASRLRERQSS----------LPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDA 440 (451)
Q Consensus 371 ~~lv~ey~~~gsL~~~l~~~~~~----------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~ 440 (451)
.+||+|||..|||.++|+.+... ..+++..+.+.||.|||.||+||-++ .+|||||..+|+|+.++.
T Consensus 564 ~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~---~FVHRDLATRNCLVge~l 640 (774)
T KOG1026|consen 564 LCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH---HFVHRDLATRNCLVGENL 640 (774)
T ss_pred eEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---cccccchhhhhceeccce
Confidence 99999999999999999864221 23488899999999999999999999 999999999999999999
Q ss_pred Cccchhh
Q 013004 441 DQSSKTI 447 (451)
Q Consensus 441 ~~~i~df 447 (451)
.+||+||
T Consensus 641 ~VKIsDf 647 (774)
T KOG1026|consen 641 VVKISDF 647 (774)
T ss_pred EEEeccc
Confidence 9999998
No 17
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=99.93 E-value=2e-26 Score=224.43 Aligned_cols=145 Identities=27% Similarity=0.363 Sum_probs=127.8
Q ss_pred HHhcCCCCCCccCccCCceEEEEEe-CCCCEEEEEEcccccccc--cHHHHHHHHHHHhcC-CCCCccceeeEEecCCee
Q 013004 296 VATDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSG--GELQFQTEVKIISMA-VHRNLLRLYGFCTTVTEK 371 (451)
Q Consensus 296 ~~~~~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~~--~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~ 371 (451)
....||...+.||+|+|++|++|+. .+++.||||++.+..-.. ......+|-..|..+ .||.||+|+..|++...+
T Consensus 70 k~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sL 149 (604)
T KOG0592|consen 70 KTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESL 149 (604)
T ss_pred CChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccce
Confidence 3456788899999999999999985 468999999996543221 122456788888888 799999999999999999
Q ss_pred eEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 372 LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 372 ~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|+|+||+++|+|.+++++.+ .+++..+..++.+|+.||+|||++ +||||||||+|||+|+||.++|.||
T Consensus 150 YFvLe~A~nGdll~~i~K~G----sfde~caR~YAAeIldAleylH~~---GIIHRDlKPENILLd~dmhikITDF 218 (604)
T KOG0592|consen 150 YFVLEYAPNGDLLDLIKKYG----SFDETCARFYAAEILDALEYLHSN---GIIHRDLKPENILLDKDGHIKITDF 218 (604)
T ss_pred EEEEEecCCCcHHHHHHHhC----cchHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeEcCCCcEEEeec
Confidence 99999999999999998874 389999999999999999999999 9999999999999999999999998
No 18
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=99.93 E-value=6.7e-26 Score=205.90 Aligned_cols=143 Identities=27% Similarity=0.413 Sum_probs=128.0
Q ss_pred hcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccc--cccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEE
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLV 374 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 374 (451)
.++|+..+.||.|+||+|..++.+ +|..+|+|++.+... ..+.....+|..+++.+.||+++++++.+.+.+.++||
T Consensus 43 l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymv 122 (355)
T KOG0616|consen 43 LQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMV 122 (355)
T ss_pred hhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEE
Confidence 457888899999999999999865 588999999965432 12233467899999999999999999999999999999
Q ss_pred EecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 375 YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 375 ~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|||++||.|++++++.+ +++.+.+..+|.||+.|++|||+. +|++|||||+|||+|.+|-.||.||
T Consensus 123 meyv~GGElFS~Lrk~~----rF~e~~arFYAAeivlAleylH~~---~iiYRDLKPENiLlD~~G~iKitDF 188 (355)
T KOG0616|consen 123 MEYVPGGELFSYLRKSG----RFSEPHARFYAAEIVLALEYLHSL---DIIYRDLKPENLLLDQNGHIKITDF 188 (355)
T ss_pred EeccCCccHHHHHHhcC----CCCchhHHHHHHHHHHHHHHHHhc---CeeeccCChHHeeeccCCcEEEEec
Confidence 99999999999999865 389999999999999999999999 9999999999999999999999997
No 19
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.93 E-value=2.7e-26 Score=202.72 Aligned_cols=146 Identities=30% Similarity=0.442 Sum_probs=129.2
Q ss_pred HhcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccc--cccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeE
Q 013004 297 ATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLL 373 (451)
Q Consensus 297 ~~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 373 (451)
+.++|+..+.||+|.||.||.|+.+ ++-.||+|++-+..- ..-..++.+|+++-+.++||||.++++++.+....|+
T Consensus 20 ~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyL 99 (281)
T KOG0580|consen 20 TLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYL 99 (281)
T ss_pred chhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEE
Confidence 4578999999999999999999864 577899999854321 2223479999999999999999999999999999999
Q ss_pred EEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 374 VYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 374 v~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
++||..+|+++..|++... ..++......++.|+|.|+.|+|.. +|||||+||+|+|++.+++.|++||
T Consensus 100 ilEya~~gel~k~L~~~~~--~~f~e~~~a~Yi~q~A~Al~y~h~k---~VIhRdiKpenlLlg~~~~lkiAdf 168 (281)
T KOG0580|consen 100 ILEYAPRGELYKDLQEGRM--KRFDEQRAATYIKQLANALLYCHLK---RVIHRDIKPENLLLGSAGELKIADF 168 (281)
T ss_pred EEEecCCchHHHHHHhccc--ccccccchhHHHHHHHHHHHHhccC---CcccCCCCHHHhccCCCCCeeccCC
Confidence 9999999999999986533 3488888999999999999999998 9999999999999999999999998
No 20
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=99.93 E-value=3e-26 Score=230.91 Aligned_cols=140 Identities=31% Similarity=0.462 Sum_probs=130.6
Q ss_pred CCCCccCccCCceEEEEEeCC----CCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEec
Q 013004 302 SNKNILGRGGFGKVYKGRLAD----GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 377 (451)
Q Consensus 302 ~~~~~lG~G~fg~Vy~~~~~~----~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey 377 (451)
+..++||.|.||+||+|+++- ...||||.+|...++....+|+.|+-+|.+++||||++|.|+....+..++|+||
T Consensus 632 ~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiTEy 711 (996)
T KOG0196|consen 632 KIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIITEY 711 (996)
T ss_pred EEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEhhh
Confidence 456899999999999998742 4579999999988887788999999999999999999999999999999999999
Q ss_pred CCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 378 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 378 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|++|+|+.+|++..++ +++.+...+.++||.||.||-+. +.|||||.++|||++.+...||+||
T Consensus 712 MENGsLDsFLR~~DGq---ftviQLVgMLrGIAsGMkYLsdm---~YVHRDLAARNILVNsnLvCKVsDF 775 (996)
T KOG0196|consen 712 MENGSLDSFLRQNDGQ---FTVIQLVGMLRGIASGMKYLSDM---NYVHRDLAARNILVNSNLVCKVSDF 775 (996)
T ss_pred hhCCcHHHHHhhcCCc---eEeehHHHHHHHHHHHhHHHhhc---CchhhhhhhhheeeccceEEEeccc
Confidence 9999999999998754 89999999999999999999998 9999999999999999999999998
No 21
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.93 E-value=5.4e-26 Score=225.60 Aligned_cols=147 Identities=30% Similarity=0.481 Sum_probs=128.7
Q ss_pred HHHhcCCCCCCccCccCCceEEEEEeCC--C--CE-EEEEEccc--ccccccHHHHHHHHHHHhcCCCCCccceeeEEec
Q 013004 295 QVATDGFSNKNILGRGGFGKVYKGRLAD--G--KL-VAVKRLKE--ERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTT 367 (451)
Q Consensus 295 ~~~~~~f~~~~~lG~G~fg~Vy~~~~~~--~--~~-vAvK~~~~--~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~ 367 (451)
+...++....+.||+|+||+||+|+++. + .. ||||..+. ........+|++|+++|..++|||||+++|++..
T Consensus 153 el~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~ 232 (474)
T KOG0194|consen 153 ELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVL 232 (474)
T ss_pred EEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcC
Confidence 3444555666899999999999998642 2 23 89999875 2334445689999999999999999999999999
Q ss_pred CCeeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 368 VTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 368 ~~~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
...+++|||+|.||+|.++|++... .++..++..++.++|+||+|||++ ++|||||.++|+|++.++.+||+||
T Consensus 233 ~~Pl~ivmEl~~gGsL~~~L~k~~~---~v~~~ek~~~~~~AA~Gl~YLh~k---~~IHRDIAARNcL~~~~~~vKISDF 306 (474)
T KOG0194|consen 233 EEPLMLVMELCNGGSLDDYLKKNKK---SLPTLEKLRFCYDAARGLEYLHSK---NCIHRDIAARNCLYSKKGVVKISDF 306 (474)
T ss_pred CCccEEEEEecCCCcHHHHHHhCCC---CCCHHHHHHHHHHHHhHHHHHHHC---CCcchhHhHHHheecCCCeEEeCcc
Confidence 9999999999999999999998754 489999999999999999999999 9999999999999999999999998
No 22
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.93 E-value=2.4e-25 Score=212.43 Aligned_cols=146 Identities=26% Similarity=0.390 Sum_probs=133.5
Q ss_pred HhcCCCCCCccCccCCceEEEEEe-CCCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEE
Q 013004 297 ATDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 375 (451)
Q Consensus 297 ~~~~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (451)
..++|+..++||.|.-+.||+|++ +.++.||||++.-+........+++|+..|+.++||||++++..|..+.++|+||
T Consensus 24 n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVm 103 (516)
T KOG0582|consen 24 NAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVM 103 (516)
T ss_pred CccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEee
Confidence 346788889999999999999985 6789999999987766666678999999999999999999999999999999999
Q ss_pred ecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 376 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 376 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
.||.+||+.+.++...... +++..+..|..++++||.|||++ |.||||+|+.|||+|+||.+|++||
T Consensus 104 pfMa~GS~ldIik~~~~~G--l~E~~Ia~iLre~LkaL~YLH~~---G~IHRdvKAgnILi~~dG~VkLadF 170 (516)
T KOG0582|consen 104 PFMAGGSLLDIIKTYYPDG--LEEASIATILREVLKALDYLHQN---GHIHRDVKAGNILIDSDGTVKLADF 170 (516)
T ss_pred hhhcCCcHHHHHHHHcccc--ccHHHHHHHHHHHHHHHHHHHhc---CceecccccccEEEcCCCcEEEcCc
Confidence 9999999999998764433 88899999999999999999999 9999999999999999999999998
No 23
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=99.93 E-value=8.6e-26 Score=208.20 Aligned_cols=143 Identities=27% Similarity=0.425 Sum_probs=125.4
Q ss_pred hcCCCCCCccCccCCceEEEEEe-CCCCEEEEEEcccccccccH-HHHHHHHHHHhcCCCCCccceeeEEe--cCCeeeE
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGE-LQFQTEVKIISMAVHRNLLRLYGFCT--TVTEKLL 373 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~~~~-~~~~~E~~~l~~l~H~niv~l~~~~~--~~~~~~l 373 (451)
.++|+..+.|++|+||.||+|+. ++++.||+|+++.+....+. ....+|+.++..++|||||.+..+.. +-+.+|+
T Consensus 75 v~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~ 154 (419)
T KOG0663|consen 75 VEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYI 154 (419)
T ss_pred HHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeee
Confidence 35677789999999999999996 56899999999876644432 36789999999999999999988765 4567999
Q ss_pred EEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 374 VYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 374 v~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|||||+. ||...+..... ++...+.+.+..|+++|++|||.+ -|+|||||++|+|+...|..||+||
T Consensus 155 VMe~~Eh-DLksl~d~m~q---~F~~~evK~L~~QlL~glk~lH~~---wilHRDLK~SNLLm~~~G~lKiaDF 221 (419)
T KOG0663|consen 155 VMEYVEH-DLKSLMETMKQ---PFLPGEVKTLMLQLLRGLKHLHDN---WILHRDLKTSNLLLSHKGILKIADF 221 (419)
T ss_pred eHHHHHh-hHHHHHHhccC---CCchHHHHHHHHHHHHHHHHHhhc---eeEecccchhheeeccCCcEEeccc
Confidence 9999987 99999987653 488899999999999999999999 8999999999999999999999998
No 24
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.92 E-value=2.5e-25 Score=213.53 Aligned_cols=145 Identities=28% Similarity=0.387 Sum_probs=122.1
Q ss_pred HHhcCCCCCCccCccCCceEEEEEe-CCCCEEEEEEccccccc-------------ccHHHHHHHHHHHhcCCCCCccce
Q 013004 296 VATDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTS-------------GGELQFQTEVKIISMAVHRNLLRL 361 (451)
Q Consensus 296 ~~~~~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~-------------~~~~~~~~E~~~l~~l~H~niv~l 361 (451)
+..+.|+..+.||+|.||+|-+|+. .+++.||||++.+.... ...+...+|+.+|++++|||||+|
T Consensus 94 k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~L 173 (576)
T KOG0585|consen 94 KQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKL 173 (576)
T ss_pred eehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEE
Confidence 3456788899999999999999985 46899999999543211 012367899999999999999999
Q ss_pred eeEEecC--CeeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCC
Q 013004 362 YGFCTTV--TEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDED 439 (451)
Q Consensus 362 ~~~~~~~--~~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~ 439 (451)
+++..++ +.+|||+|||..|.+...=.. .+.++..++.+|..++..||+|||.+ +||||||||+|+|++++
T Consensus 174 iEvLDDP~s~~~YlVley~s~G~v~w~p~d----~~els~~~Ar~ylrDvv~GLEYLH~Q---giiHRDIKPsNLLl~~~ 246 (576)
T KOG0585|consen 174 IEVLDDPESDKLYLVLEYCSKGEVKWCPPD----KPELSEQQARKYLRDVVLGLEYLHYQ---GIIHRDIKPSNLLLSSD 246 (576)
T ss_pred EEeecCcccCceEEEEEeccCCccccCCCC----cccccHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEEcCC
Confidence 9998764 568999999999987533222 22389999999999999999999999 99999999999999999
Q ss_pred CCccchhh
Q 013004 440 ADQSSKTI 447 (451)
Q Consensus 440 ~~~~i~df 447 (451)
|.+||+||
T Consensus 247 g~VKIsDF 254 (576)
T KOG0585|consen 247 GTVKISDF 254 (576)
T ss_pred CcEEeecc
Confidence 99999998
No 25
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.92 E-value=4.1e-26 Score=219.12 Aligned_cols=143 Identities=26% Similarity=0.392 Sum_probs=126.2
Q ss_pred hcCCCCCCccCccCCceEEEEEe-CCCCEEEEEEcccccccccHHHHHHHHHHHhcCC-CCCccceeeEEecCC-eeeEE
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAV-HRNLLRLYGFCTTVT-EKLLV 374 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~-~~~lv 374 (451)
.++|...+.||.|.||.||+|+- .+++.||||+++.....-++..-+||+..+.+++ |||||++.+++.+.+ .+++|
T Consensus 9 m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fV 88 (538)
T KOG0661|consen 9 MDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFV 88 (538)
T ss_pred HHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeee
Confidence 45677789999999999999984 5689999999976543323334579999999999 999999999998877 99999
Q ss_pred EecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 375 YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 375 ~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
||||+. .|++.++++. ..+++.++..|+.||.+||+|+|.+ |+.|||+||+|||+.....+||+||
T Consensus 89 fE~Md~-NLYqLmK~R~---r~fse~~irnim~QilqGL~hiHk~---GfFHRDlKPENiLi~~~~~iKiaDF 154 (538)
T KOG0661|consen 89 FEFMDC-NLYQLMKDRN---RLFSESDIRNIMYQILQGLAHIHKH---GFFHRDLKPENILISGNDVIKIADF 154 (538)
T ss_pred HHhhhh-hHHHHHhhcC---CcCCHHHHHHHHHHHHHHHHHHHhc---CcccccCChhheEecccceeEeccc
Confidence 999975 9999998873 3599999999999999999999999 9999999999999999889999998
No 26
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=99.92 E-value=1.2e-25 Score=221.51 Aligned_cols=149 Identities=31% Similarity=0.494 Sum_probs=132.3
Q ss_pred cHHHHHHHhcCCCCCCccCccCCceEEEEEeCCCCEEEEEEcccccccc-cHHHHHHHHHHHhcCCCCCccceeeEEecC
Q 013004 290 SLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHRNLLRLYGFCTTV 368 (451)
Q Consensus 290 ~~~~~~~~~~~f~~~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~ 368 (451)
+.+++.+..+++...+.||+|+||+||+|+|.. .||||.++...... ..+.|..|+.++++-+|.||+-++|||..+
T Consensus 383 s~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG--dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p 460 (678)
T KOG0193|consen 383 SLEEWEIPPEEVLLGERIGSGSFGTVYRGRWHG--DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNP 460 (678)
T ss_pred cccccccCHHHhhccceeccccccceeeccccc--ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCC
Confidence 345666666777888999999999999999853 59999998765433 345799999999999999999999999988
Q ss_pred CeeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 369 TEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 369 ~~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
.. .+|+.+|+|-+|+.+++.... .++..+...||+|||+||.|||.+ +|||||||+.||++++++.+||.||
T Consensus 461 ~~-AIiTqwCeGsSLY~hlHv~et---kfdm~~~idIAqQiaqGM~YLHAK---~IIHrDLKSnNIFl~~~~kVkIgDF 532 (678)
T KOG0193|consen 461 PL-AIITQWCEGSSLYTHLHVQET---KFDMNTTIDIAQQIAQGMDYLHAK---NIIHRDLKSNNIFLHEDLKVKIGDF 532 (678)
T ss_pred ce-eeeehhccCchhhhhccchhh---hhhHHHHHHHHHHHHHhhhhhhhh---hhhhhhccccceEEccCCcEEEecc
Confidence 77 999999999999999997653 488899999999999999999999 9999999999999999999999998
No 27
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.92 E-value=1.1e-24 Score=214.89 Aligned_cols=144 Identities=26% Similarity=0.395 Sum_probs=126.9
Q ss_pred HhcCCCCCCccCccCCceEEEEEe-CCCCEEEEEEccccccc----ccHHHHHHHHHHHhcCC-CCCccceeeEEecCCe
Q 013004 297 ATDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTS----GGELQFQTEVKIISMAV-HRNLLRLYGFCTTVTE 370 (451)
Q Consensus 297 ~~~~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~----~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~ 370 (451)
....|...+.||+|+||+|+.|+. .+++.||+|.+...... .......+|+.+++.++ ||||+++++++.....
T Consensus 15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~ 94 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTK 94 (370)
T ss_pred ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCe
Confidence 355788889999999999999975 46899999977553111 12335678999999999 9999999999999999
Q ss_pred eeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCC-CCccchhh
Q 013004 371 KLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDED-ADQSSKTI 447 (451)
Q Consensus 371 ~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~-~~~~i~df 447 (451)
.++||||+.+|+|++++.... ++.+.++..++.|++.|++|+|+. +|+||||||+|||+|.+ +++||+||
T Consensus 95 ~~ivmEy~~gGdL~~~i~~~g----~l~E~~ar~~F~Qlisav~y~H~~---gi~HRDLK~ENilld~~~~~~Kl~DF 165 (370)
T KOG0583|consen 95 IYIVMEYCSGGDLFDYIVNKG----RLKEDEARKYFRQLISAVAYCHSR---GIVHRDLKPENILLDGNEGNLKLSDF 165 (370)
T ss_pred EEEEEEecCCccHHHHHHHcC----CCChHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEecCCCCCEEEecc
Confidence 999999999999999998843 378899999999999999999999 99999999999999999 99999998
No 28
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.92 E-value=3.7e-26 Score=206.11 Aligned_cols=149 Identities=25% Similarity=0.368 Sum_probs=127.1
Q ss_pred hcCCCCCCccCccCCceEEEEE-eCCCCEEEEEEccccccc-ccHHHHHHHHHHHhcCCCCCccceee-EEecCCe-eeE
Q 013004 298 TDGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLKEERTS-GGELQFQTEVKIISMAVHRNLLRLYG-FCTTVTE-KLL 373 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~-~~~~~~vAvK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~-~~~~~~~-~~l 373 (451)
..+|+..+.||+|.||+||++. ..+|..||.|.++-+... ....+...|+.+++.++|||||++++ .+.+.++ +++
T Consensus 18 l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlni 97 (375)
T KOG0591|consen 18 LADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNI 97 (375)
T ss_pred HHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHH
Confidence 3456677889999999999997 568999999998743322 23346899999999999999999998 4455555 899
Q ss_pred EEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCC--eeecCCCCCceeeCCCCCccchhh
Q 013004 374 VYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPK--IIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 374 v~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~--iiHrDlK~~NILld~~~~~~i~df 447 (451)
|||||..|||...++..+.....+++.+.+++..|++.||.++|+.. |+ |+||||||.||++|.+|.+|++||
T Consensus 98 vmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~-~r~~VmHRDIKPaNIFl~~~gvvKLGDf 172 (375)
T KOG0591|consen 98 VMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKI-PRGTVMHRDIKPANIFLTANGVVKLGDF 172 (375)
T ss_pred HHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccc-cccceeeccCcchheEEcCCCceeeccc
Confidence 99999999999999876666667999999999999999999999942 24 999999999999999999999998
No 29
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.92 E-value=1.8e-24 Score=206.31 Aligned_cols=139 Identities=32% Similarity=0.454 Sum_probs=118.3
Q ss_pred cCCCCCCccCccCCceEEEEEeCCCCEEEEEEcccccccccHHHHHHHHHHH--hcCCCCCccceeeEEecC----Ceee
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKII--SMAVHRNLLRLYGFCTTV----TEKL 372 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l--~~l~H~niv~l~~~~~~~----~~~~ 372 (451)
......+.||+|+||+||+|+|+ |+.||||++... ++..+.+|.++. -+++|+||..+++.-... .++|
T Consensus 211 rqI~L~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~sr----dE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLw 285 (513)
T KOG2052|consen 211 RQIVLQEIIGKGRFGEVWRGRWR-GEDVAVKIFSSR----DERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLW 285 (513)
T ss_pred heeEEEEEecCccccceeecccc-CCceEEEEeccc----chhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEE
Confidence 45677899999999999999995 789999999532 233556666665 477999999999876543 3689
Q ss_pred EEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhc-----CCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 373 LVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHE-----HCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 373 lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~-----~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
||++|.+.|||+++|... .++-...++++..+|.||++||. +.+|.|.|||||+.|||+..++...|+|+
T Consensus 286 LvTdYHe~GSL~DyL~r~-----tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADL 360 (513)
T KOG2052|consen 286 LVTDYHEHGSLYDYLNRN-----TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADL 360 (513)
T ss_pred EeeecccCCcHHHHHhhc-----cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeec
Confidence 999999999999999874 38889999999999999999995 46999999999999999999999999986
No 30
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=99.92 E-value=7.9e-25 Score=215.52 Aligned_cols=149 Identities=30% Similarity=0.446 Sum_probs=125.0
Q ss_pred HHhcCCCCCCccCccCCceEEEEEe------CCCCEEEEEEcccccccccHHHHHHHHHHHhcC-CCCCccceeeEEecC
Q 013004 296 VATDGFSNKNILGRGGFGKVYKGRL------ADGKLVAVKRLKEERTSGGELQFQTEVKIISMA-VHRNLLRLYGFCTTV 368 (451)
Q Consensus 296 ~~~~~f~~~~~lG~G~fg~Vy~~~~------~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~ 368 (451)
...++|...+.||+|+||.||+|.. .+++.||||+++..........+.+|+.++..+ +||||++++++|...
T Consensus 4 ~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~ 83 (338)
T cd05102 4 FPRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKP 83 (338)
T ss_pred cchhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCC
Confidence 3456788899999999999999974 235689999987543333345689999999999 899999999988764
Q ss_pred C-eeeEEEecCCCCChhHHhhccCCC------------------------------------------------------
Q 013004 369 T-EKLLVYPYMTNGSVASRLRERQSS------------------------------------------------------ 393 (451)
Q Consensus 369 ~-~~~lv~ey~~~gsL~~~l~~~~~~------------------------------------------------------ 393 (451)
+ ..+++|||+++|+|.+++......
T Consensus 84 ~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (338)
T cd05102 84 NGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQET 163 (338)
T ss_pred CCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhc
Confidence 4 578999999999999998753210
Q ss_pred ----CCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 394 ----LPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 394 ----~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
..++++.+...++.|+++||+|||+. +|+||||||+|||+++++.++++||
T Consensus 164 ~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDiKp~Nil~~~~~~~kl~Df 218 (338)
T cd05102 164 DDLWKSPLTMEDLICYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDF 218 (338)
T ss_pred cccccCCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCccceEEEcCCCcEEEeec
Confidence 12478889999999999999999998 9999999999999999999999998
No 31
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=99.91 E-value=2.7e-24 Score=208.54 Aligned_cols=146 Identities=29% Similarity=0.469 Sum_probs=125.4
Q ss_pred cCCCCCCccCccCCceEEEEEeCC-----------------CCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccce
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLAD-----------------GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRL 361 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~~-----------------~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l 361 (451)
++|...+.||+|+||.||+|.+++ +..||+|.++.........+|.+|+.++..++||||+++
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 84 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL 84 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence 467778899999999999997532 347999998764433344579999999999999999999
Q ss_pred eeEEecCCeeeEEEecCCCCChhHHhhccCC---------------CCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeee
Q 013004 362 YGFCTTVTEKLLVYPYMTNGSVASRLRERQS---------------SLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIH 426 (451)
Q Consensus 362 ~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~---------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH 426 (451)
++++...+..+++|||+++|+|.+++..... ....++|.....++.|++.||.|||+. +|+|
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~ivH 161 (304)
T cd05096 85 LGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL---NFVH 161 (304)
T ss_pred EEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC---Cccc
Confidence 9999999999999999999999999865321 113478899999999999999999998 9999
Q ss_pred cCCCCCceeeCCCCCccchhh
Q 013004 427 RDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 427 rDlK~~NILld~~~~~~i~df 447 (451)
|||||+|||+++++.+|++||
T Consensus 162 ~dlkp~Nill~~~~~~kl~Df 182 (304)
T cd05096 162 RDLATRNCLVGENLTIKIADF 182 (304)
T ss_pred cCcchhheEEcCCccEEECCC
Confidence 999999999999999999998
No 32
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=99.91 E-value=1.6e-24 Score=202.91 Aligned_cols=145 Identities=26% Similarity=0.413 Sum_probs=122.8
Q ss_pred cCCCCCCccCccCCceEEEEEe-CCCCEEEEEEccccccccc-HHHHHHHHHHHhcCCCCC-ccceeeEEecCC------
Q 013004 299 DGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGG-ELQFQTEVKIISMAVHRN-LLRLYGFCTTVT------ 369 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~~~-~~~~~~E~~~l~~l~H~n-iv~l~~~~~~~~------ 369 (451)
..|+..+.||+|+||+||+|+. .+|+.||+|+++.....++ .....+|+.+++.++|+| ||++++++.+.+
T Consensus 11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~ 90 (323)
T KOG0594|consen 11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIG 90 (323)
T ss_pred HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccc
Confidence 3455567799999999999984 5789999999976544322 235789999999999999 999999998877
Q ss_pred eeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 370 EKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 370 ~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
..++|+||+.. +|..++.........++-...+.++.|++.||+|||++ +|+||||||+|||++++|..|++||
T Consensus 91 ~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~---~IlHRDLKPQNlLi~~~G~lKlaDF 164 (323)
T KOG0594|consen 91 KLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSH---GILHRDLKPQNLLISSSGVLKLADF 164 (323)
T ss_pred eEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCcceEEECCCCcEeeecc
Confidence 78999999975 99999987542112356678899999999999999999 9999999999999999999999998
No 33
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.91 E-value=2.5e-24 Score=204.67 Aligned_cols=142 Identities=31% Similarity=0.512 Sum_probs=123.7
Q ss_pred CCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCC--eeeEEEe
Q 013004 300 GFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVT--EKLLVYP 376 (451)
Q Consensus 300 ~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~--~~~lv~e 376 (451)
++...+.||+|+||.||++... +|...|||.+....... ...+.+|+.+|.+++|||||+.+|...... ..++.||
T Consensus 18 ~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~-~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mE 96 (313)
T KOG0198|consen 18 NWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPT-SESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFME 96 (313)
T ss_pred hhhhhccccCccceEEEEEEecCCCcceeeeeeecccchh-HHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeee
Confidence 4566788999999999999865 48999999886542222 446899999999999999999999855544 5899999
Q ss_pred cCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCC-CCCccchhhh
Q 013004 377 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDE-DADQSSKTIL 448 (451)
Q Consensus 377 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~-~~~~~i~df~ 448 (451)
|+++|+|.+++..... .+++..+..++.||++||.|||++ +||||||||+|||++. ++.+||+||-
T Consensus 97 y~~~GsL~~~~~~~g~---~l~E~~v~~ytr~iL~GL~ylHs~---g~vH~DiK~~NiLl~~~~~~~KlaDFG 163 (313)
T KOG0198|consen 97 YAPGGSLSDLIKRYGG---KLPEPLVRRYTRQILEGLAYLHSK---GIVHCDIKPANILLDPSNGDVKLADFG 163 (313)
T ss_pred ccCCCcHHHHHHHcCC---CCCHHHHHHHHHHHHHHHHHHHhC---CEeccCcccceEEEeCCCCeEEeccCc
Confidence 9999999999987653 389999999999999999999999 9999999999999999 7999999995
No 34
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=99.91 E-value=6.9e-25 Score=214.84 Aligned_cols=145 Identities=26% Similarity=0.396 Sum_probs=129.5
Q ss_pred hcCCCCCCccCccCCceEEEEEeCCCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEec
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 377 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey 377 (451)
++.....+.||+|-||+|..|+...+..||||.++.........+|.+|+++|.+++|||||+++|+|..++.+++++||
T Consensus 537 Rs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EY 616 (807)
T KOG1094|consen 537 RSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEY 616 (807)
T ss_pred hhheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHH
Confidence 34455678899999999999998778999999999877666667899999999999999999999999999999999999
Q ss_pred CCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 378 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 378 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|++|+|.+++....... ..-....+|+.|||.||+||.+. ++||||+.++|+|+|.++.+||+||
T Consensus 617 mEnGDLnqFl~aheapt--~~t~~~vsi~tqiasgmaYLes~---nfVHrd~a~rNcLv~~e~~iKiadf 681 (807)
T KOG1094|consen 617 MENGDLNQFLSAHELPT--AETAPGVSICTQIASGMAYLESL---NFVHRDLATRNCLVDGEFTIKIADF 681 (807)
T ss_pred HhcCcHHHHHHhccCcc--cccchhHHHHHHHHHHHHHHHhh---chhhccccccceeecCcccEEecCc
Confidence 99999999998764321 34455668999999999999998 9999999999999999999999999
No 35
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=99.91 E-value=3.9e-24 Score=203.32 Aligned_cols=143 Identities=27% Similarity=0.385 Sum_probs=126.6
Q ss_pred cCCCCCCccCccCCceEEEEEeC----CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEE
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA----DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLV 374 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~----~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 374 (451)
++|+..+.||+|+||.||+|.+. .+..||+|.++..........|.+|+.++..++||||+++++++...+..++|
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 84 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIV 84 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEE
Confidence 45777899999999999999753 35689999997654433445789999999999999999999999999999999
Q ss_pred EecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 375 YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 375 ~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|||+++|+|.+++.... ..++|.++..++.|++.||+|||+. +++||||||+||+++.++.++++||
T Consensus 85 ~e~~~~~~L~~~l~~~~---~~l~~~~~~~~~~~i~~al~~lH~~---~iiH~dikp~nili~~~~~~~l~df 151 (266)
T cd05064 85 TEYMSNGALDSFLRKHE---GQLVAGQLMGMLPGLASGMKYLSEM---GYVHKGLAAHKVLVNSDLVCKISGF 151 (266)
T ss_pred EEeCCCCcHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHHHC---CEeeccccHhhEEEcCCCcEEECCC
Confidence 99999999999997643 2488999999999999999999998 9999999999999999999999998
No 36
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=99.91 E-value=9.4e-25 Score=213.28 Aligned_cols=141 Identities=26% Similarity=0.425 Sum_probs=126.6
Q ss_pred cCCCCCCccCccCCceEEEEEeC-CCCEEEEEEccccc-ccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEe
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEER-TSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 376 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 376 (451)
++|...+.||+|+||.||+|+.+ +.+.||+|.+.+.. ...+.....+|++++..++|||||.++++|++..+.|+|+|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte 81 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE 81 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence 46777789999999999999854 67899999985433 33344568999999999999999999999999999999999
Q ss_pred cCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 377 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 377 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|+.| +|+.++.+... +++..+..++.++..||.|||+. +|+|||+||+|||++..+.+|++||
T Consensus 82 ~a~g-~L~~il~~d~~----lpEe~v~~~a~~LVsaL~yLhs~---rilhrd~kPqniLl~~~~~~KlcdF 144 (808)
T KOG0597|consen 82 YAVG-DLFTILEQDGK----LPEEQVRAIAYDLVSALYYLHSN---RILHRDMKPQNILLEKGGTLKLCDF 144 (808)
T ss_pred hhhh-hHHHHHHhccC----CCHHHHHHHHHHHHHHHHHHHhc---CcccccCCcceeeecCCCceeechh
Confidence 9987 99999987643 89999999999999999999999 9999999999999999999999997
No 37
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=99.91 E-value=1.7e-24 Score=204.94 Aligned_cols=144 Identities=28% Similarity=0.308 Sum_probs=127.4
Q ss_pred cCCCCCCccCccCCceEEEEEeCC-CCEEEEEEccccccc--ccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEE
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLAD-GKLVAVKRLKEERTS--GGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 375 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (451)
++|...+.||.|.-|+||++++++ +..+|+|++.+.... +...+.+.|.++|+.++||.++.||+.+++.+..+++|
T Consensus 77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~m 156 (459)
T KOG0610|consen 77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVM 156 (459)
T ss_pred HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEE
Confidence 445667889999999999999864 689999999654322 22336788999999999999999999999999999999
Q ss_pred ecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 376 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 376 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|||+||+|....+++.. ..++...+..+|.+|+.||+|||-. |||+|||||+|||+-+||.+-++||
T Consensus 157 eyCpGGdL~~LrqkQp~--~~fse~~aRFYaAEvl~ALEYLHml---GivYRDLKPENILvredGHIMLsDF 223 (459)
T KOG0610|consen 157 EYCPGGDLHSLRQKQPG--KRFSESAARFYAAEVLLALEYLHML---GIVYRDLKPENILVREDGHIMLSDF 223 (459)
T ss_pred ecCCCccHHHHHhhCCC--CccchhhHHHHHHHHHHHHHHHHhh---ceeeccCCcceeEEecCCcEEeeec
Confidence 99999999999887654 4589999999999999999999999 9999999999999999999999998
No 38
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=99.91 E-value=3.4e-24 Score=213.18 Aligned_cols=142 Identities=20% Similarity=0.327 Sum_probs=126.1
Q ss_pred cCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccc--cccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEE
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 375 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (451)
++|+..+.||+|+||+||+|+.. +++.||||+++.... ......+.+|+.++..++|+||+++++++.+....++||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 46888899999999999999864 588999999865321 122336788999999999999999999999999999999
Q ss_pred ecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 376 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 376 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.++++||
T Consensus 81 E~~~gg~L~~~l~~~~----~l~~~~~~~~~~qi~~aL~~lH~~---givHrDlKp~NILi~~~~~vkL~DF 145 (363)
T cd05628 81 EFLPGGDMMTLLMKKD----TLTEEETQFYIAETVLAIDSIHQL---GFIHRDIKPDNLLLDSKGHVKLSDF 145 (363)
T ss_pred cCCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCCEEEeec
Confidence 9999999999997643 388999999999999999999998 9999999999999999999999998
No 39
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=99.91 E-value=5.9e-25 Score=205.69 Aligned_cols=138 Identities=29% Similarity=0.457 Sum_probs=114.1
Q ss_pred CCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCC-----eeeEE
Q 013004 301 FSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVT-----EKLLV 374 (451)
Q Consensus 301 f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-----~~~lv 374 (451)
|...+++|.|+||.||+|... +++.||||+...+.. --.+|..+|++++|||||+|..+|.... ...+|
T Consensus 26 ~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r-----~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlV 100 (364)
T KOG0658|consen 26 YEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR-----YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLV 100 (364)
T ss_pred EEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC-----cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHH
Confidence 555689999999999999964 578999998854322 2247889999999999999998886532 23589
Q ss_pred EecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCC-CCccchhh
Q 013004 375 YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDED-ADQSSKTI 447 (451)
Q Consensus 375 ~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~-~~~~i~df 447 (451)
||||+. +|.+.++........++....+-+..|+.+||.|||+. +|+||||||+|+|+|.+ |..||+||
T Consensus 101 leymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~---~IcHRDIKPqNlLvD~~tg~LKicDF 170 (364)
T KOG0658|consen 101 LEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSH---GICHRDIKPQNLLVDPDTGVLKICDF 170 (364)
T ss_pred HHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhc---CcccCCCChheEEEcCCCCeEEeccC
Confidence 999986 99999985322233467778889999999999999998 99999999999999987 89999998
No 40
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=99.91 E-value=3.9e-24 Score=212.77 Aligned_cols=142 Identities=22% Similarity=0.365 Sum_probs=126.4
Q ss_pred cCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccc--cccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEE
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 375 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (451)
++|+..+.||+|+||+||+|+.. +++.||||+++.... ......+.+|+.++..++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 46888899999999999999864 689999999965321 122335788999999999999999999999999999999
Q ss_pred ecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 376 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 376 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.++++||
T Consensus 81 E~~~~g~L~~~l~~~~----~l~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Df 145 (364)
T cd05599 81 EYLPGGDMMTLLMKKD----TFTEEETRFYIAETILAIDSIHKL---GYIHRDIKPDNLLLDAKGHIKLSDF 145 (364)
T ss_pred CCCCCcHHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEeec
Confidence 9999999999997643 388999999999999999999999 9999999999999999999999998
No 41
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=99.91 E-value=5e-24 Score=213.11 Aligned_cols=142 Identities=19% Similarity=0.314 Sum_probs=125.4
Q ss_pred cCCCCCCccCccCCceEEEEEe-CCCCEEEEEEcccccc--cccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEE
Q 013004 299 DGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERT--SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 375 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (451)
++|+..+.||+|+||+||+++. .+++.||||.+..... ......+.+|+.++..++||||+++++++.+....++||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 3688889999999999999986 4689999999854321 222346888999999999999999999999999999999
Q ss_pred ecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 376 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 376 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.++++||
T Consensus 81 E~~~gg~L~~~l~~~~----~~~~~~~~~~~~ql~~aL~~LH~~---givHrDlkp~NIll~~~~~~kl~Df 145 (377)
T cd05629 81 EFLPGGDLMTMLIKYD----TFSEDVTRFYMAECVLAIEAVHKL---GFIHRDIKPDNILIDRGGHIKLSDF 145 (377)
T ss_pred eCCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEEeec
Confidence 9999999999997543 378889999999999999999999 9999999999999999999999998
No 42
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=99.91 E-value=4.6e-24 Score=205.69 Aligned_cols=142 Identities=24% Similarity=0.314 Sum_probs=125.7
Q ss_pred cCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccc--cccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEE
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 375 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (451)
++|+..+.||+|+||.||+|+.. +++.||+|.++.... ......+.+|+.+++.++||||+++++++.+....++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 46788899999999999999875 689999999864321 122346889999999999999999999999999999999
Q ss_pred ecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 376 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 376 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
||+++|+|.+++.... .+++.....++.|++.||+|||++ +|+||||||+|||+++++.++++||
T Consensus 81 e~~~~~~L~~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~NIli~~~~~~kl~Df 145 (291)
T cd05612 81 EYVPGGELFSYLRNSG----RFSNSTGLFYASEIVCALEYLHSK---EIVYRDLKPENILLDKEGHIKLTDF 145 (291)
T ss_pred eCCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEEec
Confidence 9999999999997653 378899999999999999999999 9999999999999999999999998
No 43
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=99.91 E-value=6.9e-24 Score=212.39 Aligned_cols=141 Identities=23% Similarity=0.287 Sum_probs=125.0
Q ss_pred CCCCCCccCccCCceEEEEEe-CCCCEEEEEEcccccc--cccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEe
Q 013004 300 GFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERT--SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 376 (451)
Q Consensus 300 ~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 376 (451)
.|+..+.||+|+||+||+|+. .+++.||||+++.... ......+.+|+.++..++|+||+++++++.+.+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 477789999999999999986 4688999999865332 1223468899999999999999999999999999999999
Q ss_pred cCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 377 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 377 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.++++||
T Consensus 82 ~~~gg~L~~~l~~~~----~~~e~~~~~~~~qi~~aL~~LH~~---givHrDlKp~Nili~~~~~~kL~DF 145 (381)
T cd05626 82 YIPGGDMMSLLIRME----VFPEVLARFYIAELTLAIESVHKM---GFIHRDIKPDNILIDLDGHIKLTDF 145 (381)
T ss_pred cCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCcHHHEEECCCCCEEEeeC
Confidence 999999999987643 378889999999999999999998 9999999999999999999999998
No 44
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=99.90 E-value=5.5e-24 Score=212.55 Aligned_cols=148 Identities=30% Similarity=0.397 Sum_probs=126.3
Q ss_pred HhcCCCCCCccCccCCceEEEEEe------CCCCEEEEEEcccccccccHHHHHHHHHHHhcC-CCCCccceeeEEecCC
Q 013004 297 ATDGFSNKNILGRGGFGKVYKGRL------ADGKLVAVKRLKEERTSGGELQFQTEVKIISMA-VHRNLLRLYGFCTTVT 369 (451)
Q Consensus 297 ~~~~f~~~~~lG~G~fg~Vy~~~~------~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~ 369 (451)
..++|+..+.||+|+||.||+|++ .++..||||+++..........+.+|+.++..+ +|||||+++++|...+
T Consensus 33 ~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~ 112 (375)
T cd05104 33 PRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGG 112 (375)
T ss_pred chHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCC
Confidence 345688889999999999999963 235689999997543333345688999999999 8999999999999999
Q ss_pred eeeEEEecCCCCChhHHhhccCCC--------------------------------------------------------
Q 013004 370 EKLLVYPYMTNGSVASRLRERQSS-------------------------------------------------------- 393 (451)
Q Consensus 370 ~~~lv~ey~~~gsL~~~l~~~~~~-------------------------------------------------------- 393 (451)
..++||||+++|+|.++++.....
T Consensus 113 ~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (375)
T cd05104 113 PTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSG 192 (375)
T ss_pred cceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccc
Confidence 999999999999999998753210
Q ss_pred ---------------CCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 394 ---------------LPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 394 ---------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
...++|.....++.|++.||+|||+. +|+||||||+|||+++++.++++||
T Consensus 193 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~Df 258 (375)
T cd05104 193 SYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASK---NCIHRDLAARNILLTHGRITKICDF 258 (375)
T ss_pred eecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCchhhEEEECCCcEEEecC
Confidence 12478899999999999999999998 9999999999999999999999998
No 45
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=99.90 E-value=6.9e-24 Score=208.12 Aligned_cols=142 Identities=22% Similarity=0.322 Sum_probs=126.0
Q ss_pred cCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccc--cccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEE
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 375 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (451)
++|+..+.||+|+||.||+|+.. +++.||+|.++.... ......+.+|+.++..++||||+++++++...+..++||
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 97 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL 97 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence 56788899999999999999875 588999999865321 122346889999999999999999999999999999999
Q ss_pred ecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 376 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 376 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+|++||
T Consensus 98 e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kl~Df 162 (329)
T PTZ00263 98 EFVVGGELFTHLRKAG----RFPNDVAKFYHAELVLAFEYLHSK---DIIYRDLKPENLLLDNKGHVKVTDF 162 (329)
T ss_pred cCCCCChHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEECCCCCEEEeec
Confidence 9999999999997653 378889999999999999999999 9999999999999999999999998
No 46
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=99.90 E-value=1.3e-23 Score=205.71 Aligned_cols=136 Identities=27% Similarity=0.340 Sum_probs=120.7
Q ss_pred CccCccCCceEEEEEe-CCCCEEEEEEcccccc--cccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEecCCCC
Q 013004 305 NILGRGGFGKVYKGRL-ADGKLVAVKRLKEERT--SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNG 381 (451)
Q Consensus 305 ~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~g 381 (451)
++||+|+||.||+|+. .+|+.||+|+++.... ......+.+|+.++..++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 4699999999999986 4689999999865432 122346788999999999999999999999999999999999999
Q ss_pred ChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 382 SVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 382 sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+||
T Consensus 81 ~L~~~l~~~~----~~~~~~~~~~~~qi~~~L~~lH~~---~ivHrDlkp~NIll~~~~~~kl~Df 139 (323)
T cd05571 81 ELFFHLSRER----VFSEDRARFYGAEIVSALGYLHSC---DVVYRDLKLENLMLDKDGHIKITDF 139 (323)
T ss_pred cHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEeeC
Confidence 9999987643 378999999999999999999999 9999999999999999999999998
No 47
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=99.90 E-value=1.5e-23 Score=201.85 Aligned_cols=142 Identities=27% Similarity=0.451 Sum_probs=124.5
Q ss_pred cCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEec
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 377 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey 377 (451)
++|...+.||+|+||.||+|+.. +++.||+|.++..........+.+|+.+++.++||||+++++++...+..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 84 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY 84 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence 46888899999999999999864 68899999986543333344678999999999999999999999999999999999
Q ss_pred CCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 378 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 378 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+.+ +|.+++..... .+++.....++.|++.||+|||+. +|+||||||+|||+++++.+|++||
T Consensus 85 ~~~-~l~~~l~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Df 147 (288)
T cd07871 85 LDS-DLKQYLDNCGN---LMSMHNVKIFMFQLLRGLSYCHKR---KILHRDLKPQNLLINEKGELKLADF 147 (288)
T ss_pred CCc-CHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEECcC
Confidence 974 99988875432 378899999999999999999998 9999999999999999999999998
No 48
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=99.90 E-value=1.1e-23 Score=207.60 Aligned_cols=143 Identities=24% Similarity=0.303 Sum_probs=125.5
Q ss_pred hcCCCCCCccCccCCceEEEEEeCC--CCEEEEEEcccccc--cccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeE
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLAD--GKLVAVKRLKEERT--SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLL 373 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~~--~~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 373 (451)
.++|+..+.||+|+||.||+|++.. +..||+|.+..... ......+.+|+.++..++||||+++++++.+.+..++
T Consensus 29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l 108 (340)
T PTZ00426 29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYL 108 (340)
T ss_pred hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEE
Confidence 4568888999999999999998643 36899999854321 2223468899999999999999999999999999999
Q ss_pred EEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 374 VYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 374 v~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
||||+++|+|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+|||++.++.++++||
T Consensus 109 v~Ey~~~g~L~~~i~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~ikL~DF 175 (340)
T PTZ00426 109 VLEFVIGGEFFTFLRRNK----RFPNDVGCFYAAQIVLIFEYLQSL---NIVYRDLKPENLLLDKDGFIKMTDF 175 (340)
T ss_pred EEeCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEecC
Confidence 999999999999997653 388999999999999999999999 9999999999999999999999998
No 49
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=99.90 E-value=9e-24 Score=210.51 Aligned_cols=146 Identities=24% Similarity=0.323 Sum_probs=127.6
Q ss_pred HHHHhcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccc--cccHHHHHHHHHHHhcCCCCCccceeeEEecCCe
Q 013004 294 LQVATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTE 370 (451)
Q Consensus 294 ~~~~~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 370 (451)
.....++|+..+.||+|+||.||+++.. +++.||+|.++.... ......+.+|+.+++.++||||+++++++.+...
T Consensus 38 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~ 117 (370)
T cd05621 38 LQMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKY 117 (370)
T ss_pred cCCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCE
Confidence 3344577999999999999999999875 578999999864321 1223457899999999999999999999999999
Q ss_pred eeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 371 KLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 371 ~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
.++||||+++|+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+||
T Consensus 118 ~~lv~Ey~~gg~L~~~l~~~-----~~~~~~~~~~~~qil~aL~~LH~~---~IvHrDLKp~NILl~~~~~~kL~DF 186 (370)
T cd05621 118 LYMVMEYMPGGDLVNLMSNY-----DVPEKWAKFYTAEVVLALDAIHSM---GLIHRDVKPDNMLLDKHGHLKLADF 186 (370)
T ss_pred EEEEEcCCCCCcHHHHHHhc-----CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEEec
Confidence 99999999999999998653 278889999999999999999999 9999999999999999999999998
No 50
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=99.90 E-value=9.9e-24 Score=211.33 Aligned_cols=141 Identities=24% Similarity=0.309 Sum_probs=124.7
Q ss_pred CCCCCCccCccCCceEEEEEe-CCCCEEEEEEcccccc--cccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEe
Q 013004 300 GFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERT--SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 376 (451)
Q Consensus 300 ~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 376 (451)
.|+..+.||+|+||+||+|+. .+++.||+|.+..... ......+.+|+.+++.++|+|||++++++.+.+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 477789999999999999986 4688999999865321 1223468899999999999999999999999999999999
Q ss_pred cCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 377 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 377 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.++++||
T Consensus 82 ~~~gg~L~~~l~~~~----~~~e~~~~~~~~qi~~al~~lH~~---~ivHrDlKp~NILl~~~g~~kL~DF 145 (382)
T cd05625 82 YIPGGDMMSLLIRMG----IFPEDLARFYIAELTCAVESVHKM---GFIHRDIKPDNILIDRDGHIKLTDF 145 (382)
T ss_pred CCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEeEC
Confidence 999999999987643 378888999999999999999999 9999999999999999999999998
No 51
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=99.90 E-value=1.2e-23 Score=210.26 Aligned_cols=141 Identities=23% Similarity=0.307 Sum_probs=125.0
Q ss_pred CCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccc--cccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEe
Q 013004 300 GFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 376 (451)
Q Consensus 300 ~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 376 (451)
+|+..+.||+|+||.||+|+.. +++.||||.+..... ......+.+|+.++..++|+||+++++.+.+.+..++|||
T Consensus 2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E 81 (376)
T cd05598 2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (376)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEe
Confidence 6888899999999999999864 589999999864321 1223457899999999999999999999999999999999
Q ss_pred cCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 377 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 377 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.++|+||
T Consensus 82 ~~~~g~L~~~i~~~~----~~~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~ikL~DF 145 (376)
T cd05598 82 YIPGGDMMSLLIRLG----IFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDF 145 (376)
T ss_pred CCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHEEECCCCCEEEEeC
Confidence 999999999997653 378888899999999999999998 9999999999999999999999998
No 52
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.90 E-value=5.1e-24 Score=225.87 Aligned_cols=147 Identities=33% Similarity=0.510 Sum_probs=131.0
Q ss_pred hcCCCCCCccCccCCceEEEEEeCC--CC----EEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCee
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLAD--GK----LVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEK 371 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~~--~~----~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 371 (451)
.+..+..+.||+|+||.||.|.+.+ +. .||||.++...+.+...+|.+|..+|+.++|||||+++|+|.+....
T Consensus 691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~ 770 (1025)
T KOG1095|consen 691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPP 770 (1025)
T ss_pred hhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCc
Confidence 4455667899999999999998754 32 49999998776666677899999999999999999999999999999
Q ss_pred eEEEecCCCCChhHHhhccCC---CCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 372 LLVYPYMTNGSVASRLRERQS---SLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 372 ~lv~ey~~~gsL~~~l~~~~~---~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
++++|||++|||..+|++.+. +...++..+.+.++.|||+|+.||+++ ++|||||.++|+|++....+||+||
T Consensus 771 ~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~---~fvHRDLAaRNCLL~~~r~VKIaDF 846 (1025)
T KOG1095|consen 771 LILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESK---HFVHRDLAARNCLLDERRVVKIADF 846 (1025)
T ss_pred EEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhC---CCcCcchhhhheeecccCcEEEccc
Confidence 999999999999999998621 234588899999999999999999999 9999999999999999999999998
No 53
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=99.90 E-value=1.8e-23 Score=204.57 Aligned_cols=136 Identities=26% Similarity=0.346 Sum_probs=120.4
Q ss_pred CccCccCCceEEEEEe-CCCCEEEEEEcccccc--cccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEecCCCC
Q 013004 305 NILGRGGFGKVYKGRL-ADGKLVAVKRLKEERT--SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNG 381 (451)
Q Consensus 305 ~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~g 381 (451)
+.||+|+||.||+++. .+|+.||+|.++.... ......+.+|+.++..++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 4689999999999986 4689999999865432 122345788999999999999999999999999999999999999
Q ss_pred ChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 382 SVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 382 sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+|..++.... .+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+|++||
T Consensus 81 ~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Df 139 (323)
T cd05595 81 ELFFHLSRER----VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDF 139 (323)
T ss_pred cHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEEcCCCCEEeccc
Confidence 9998887643 388999999999999999999999 9999999999999999999999998
No 54
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=99.90 E-value=2.3e-23 Score=201.95 Aligned_cols=143 Identities=27% Similarity=0.462 Sum_probs=125.2
Q ss_pred hcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEe
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 376 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 376 (451)
.++|+..+.||+|+||.||+|+.. +++.||||.++..........+.+|+.+++.++||||+++++++.+....++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 83 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE 83 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence 367888999999999999999975 6889999998654333333467889999999999999999999999999999999
Q ss_pred cCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 377 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 377 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|+. +++.+++..... .+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+|++||
T Consensus 84 ~~~-~~l~~~~~~~~~---~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Df 147 (303)
T cd07869 84 YVH-TDLCQYMDKHPG---GLHPENVKLFLFQLLRGLSYIHQR---YILHRDLKPQNLLISDTGELKLADF 147 (303)
T ss_pred CCC-cCHHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECCC
Confidence 995 688888865432 378889999999999999999999 9999999999999999999999998
No 55
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=99.90 E-value=2.1e-23 Score=200.43 Aligned_cols=142 Identities=29% Similarity=0.406 Sum_probs=124.0
Q ss_pred CCCCCccCccCCceEEEEEe-CCCCEEEEEEccccccc--ccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEec
Q 013004 301 FSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTS--GGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 377 (451)
Q Consensus 301 f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey 377 (451)
|+..+.||+|+||+||+|.. .+++.||+|.+...... .....+.+|+.++..++|+||+++++++.+.+..++|+||
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEe
Confidence 66678999999999999986 57899999998643221 2233578999999999999999999999999999999999
Q ss_pred CCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 378 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 378 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+++|+|.+.+..... ..+++..+..++.|++.||+|||+. +|+||||||+|||+++++.++++||
T Consensus 82 ~~~g~L~~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nill~~~~~~kl~Df 146 (285)
T cd05631 82 MNGGDLKFHIYNMGN--PGFDEQRAIFYAAELCCGLEDLQRE---RIVYRDLKPENILLDDRGHIRISDL 146 (285)
T ss_pred cCCCcHHHHHHhhCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeC
Confidence 999999988865432 2488999999999999999999998 9999999999999999999999998
No 56
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=99.90 E-value=1.8e-23 Score=205.57 Aligned_cols=141 Identities=23% Similarity=0.316 Sum_probs=125.8
Q ss_pred CCCCCCccCccCCceEEEEEeC-CCCEEEEEEccccccc--ccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEe
Q 013004 300 GFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS--GGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 376 (451)
Q Consensus 300 ~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 376 (451)
+|+..+.||+|+||.||+|+.. +++.||+|+++..... .....+.+|+.++..++||||+++++++...+..++|||
T Consensus 2 ~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e 81 (333)
T cd05600 2 DFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAME 81 (333)
T ss_pred CcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEEe
Confidence 5778899999999999999975 5889999998654321 223468899999999999999999999999999999999
Q ss_pred cCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 377 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 377 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|+++|+|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+|++||
T Consensus 82 ~~~g~~L~~~l~~~~----~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kL~Df 145 (333)
T cd05600 82 YVPGGDFRTLLNNLG----VLSEDHARFYMAEMFEAVDALHEL---GYIHRDLKPENFLIDASGHIKLTDF 145 (333)
T ss_pred CCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEEEeC
Confidence 999999999997543 378999999999999999999999 9999999999999999999999998
No 57
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.90 E-value=6.6e-24 Score=211.13 Aligned_cols=141 Identities=26% Similarity=0.388 Sum_probs=127.1
Q ss_pred CCCCCCccCccCCceEEEEEe-CCCCEEEEEEcccccc--cccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEe
Q 013004 300 GFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERT--SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 376 (451)
Q Consensus 300 ~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 376 (451)
-|+..+.||+|+-|.|..|+. .+|+.+|||++.+... ........+|+.+|+.+.||||++++++|.+..++|+|.|
T Consensus 13 pwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlE 92 (786)
T KOG0588|consen 13 PWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLE 92 (786)
T ss_pred ceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEE
Confidence 366778899999999999984 6899999999966522 2223358899999999999999999999999999999999
Q ss_pred cCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 377 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 377 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|+++|.|++++..++. +.+.++.++..||..|+.|+|+. +|+||||||+|+|+|...++||+||
T Consensus 93 yv~gGELFdylv~kG~----l~e~eaa~ff~QIi~gv~yCH~~---~icHRDLKpENlLLd~~~nIKIADF 156 (786)
T KOG0588|consen 93 YVPGGELFDYLVRKGP----LPEREAAHFFRQILDGVSYCHAF---NICHRDLKPENLLLDVKNNIKIADF 156 (786)
T ss_pred ecCCchhHHHHHhhCC----CCCHHHHHHHHHHHHHHHHHhhh---cceeccCCchhhhhhcccCEeeecc
Confidence 9999999999988753 88999999999999999999999 9999999999999999999999998
No 58
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.90 E-value=8.1e-24 Score=211.85 Aligned_cols=145 Identities=28% Similarity=0.434 Sum_probs=126.8
Q ss_pred HHHhcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccc--cccHHHHHHHHHHHhcCC-CCCccceeeEEecCCe
Q 013004 295 QVATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVKIISMAV-HRNLLRLYGFCTTVTE 370 (451)
Q Consensus 295 ~~~~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~ 370 (451)
....++|...++||+|.||+|++++++ +++.+|||.+++... .++....+.|.+++.... ||.+++++.+|++.+.
T Consensus 364 ~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~ 443 (694)
T KOG0694|consen 364 PLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEH 443 (694)
T ss_pred cccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCe
Confidence 345678999999999999999999975 578999999987652 344556788888887775 9999999999999999
Q ss_pred eeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 371 KLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 371 ~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+|.||||+.|||+..+.+.. .+++..+..||+.|+.||+|||++ +|||||||.+|||+|.+|-+||+||
T Consensus 444 l~fvmey~~Ggdm~~~~~~~-----~F~e~rarfyaAev~l~L~fLH~~---~IIYRDlKLdNiLLD~eGh~kiADF 512 (694)
T KOG0694|consen 444 LFFVMEYVAGGDLMHHIHTD-----VFSEPRARFYAAEVVLGLQFLHEN---GIIYRDLKLDNLLLDTEGHVKIADF 512 (694)
T ss_pred EEEEEEecCCCcEEEEEecc-----cccHHHHHHHHHHHHHHHHHHHhc---CceeeecchhheEEcccCcEEeccc
Confidence 99999999999954444322 389999999999999999999999 9999999999999999999999998
No 59
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=99.90 E-value=1.6e-23 Score=209.13 Aligned_cols=149 Identities=30% Similarity=0.422 Sum_probs=126.4
Q ss_pred HHhcCCCCCCccCccCCceEEEEEeC------CCCEEEEEEcccccccccHHHHHHHHHHHhcC-CCCCccceeeEEecC
Q 013004 296 VATDGFSNKNILGRGGFGKVYKGRLA------DGKLVAVKRLKEERTSGGELQFQTEVKIISMA-VHRNLLRLYGFCTTV 368 (451)
Q Consensus 296 ~~~~~f~~~~~lG~G~fg~Vy~~~~~------~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~ 368 (451)
...++|+..+.||+|+||.||+|+.. +++.||||+++..........+.+|+.+++.+ +|+|||+++++|...
T Consensus 35 ~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~ 114 (374)
T cd05106 35 FPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHG 114 (374)
T ss_pred ccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCC
Confidence 34557888899999999999998742 23579999997544333344688999999999 899999999999999
Q ss_pred CeeeEEEecCCCCChhHHhhccCC--------------------------------------------------------
Q 013004 369 TEKLLVYPYMTNGSVASRLRERQS-------------------------------------------------------- 392 (451)
Q Consensus 369 ~~~~lv~ey~~~gsL~~~l~~~~~-------------------------------------------------------- 392 (451)
+..++||||+++|+|.++++....
T Consensus 115 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (374)
T cd05106 115 GPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQS 194 (374)
T ss_pred CCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccc
Confidence 999999999999999999864311
Q ss_pred ----------CCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 393 ----------SLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 393 ----------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
...++++.+...++.|++.||+|||+. +|+||||||+|||+++++.++|+||
T Consensus 195 ~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---giiHrDLkp~Nil~~~~~~~kL~Df 256 (374)
T cd05106 195 SDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASK---NCIHRDVAARNVLLTDGRVAKICDF 256 (374)
T ss_pred ccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CEEeccCchheEEEeCCCeEEEeec
Confidence 012478889999999999999999998 9999999999999999999999998
No 60
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=99.90 E-value=3e-23 Score=203.51 Aligned_cols=136 Identities=28% Similarity=0.351 Sum_probs=120.6
Q ss_pred CccCccCCceEEEEEeC-CCCEEEEEEcccccc--cccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEecCCCC
Q 013004 305 NILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNG 381 (451)
Q Consensus 305 ~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~g 381 (451)
+.||+|+||.||+++.. +++.||+|.++.... ......+.+|+.+++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 46899999999999864 689999999865432 222346889999999999999999999999999999999999999
Q ss_pred ChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 382 SVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 382 sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+|..++.... .+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+|++||
T Consensus 81 ~L~~~l~~~~----~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~NIll~~~~~~kL~Df 139 (328)
T cd05593 81 ELFFHLSRER----VFSEDRTRFYGAEIVSALDYLHSG---KIVYRDLKLENLMLDKDGHIKITDF 139 (328)
T ss_pred CHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeEECCCCcEEEecC
Confidence 9998886543 388999999999999999999999 9999999999999999999999998
No 61
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=99.90 E-value=3.5e-23 Score=201.56 Aligned_cols=134 Identities=21% Similarity=0.308 Sum_probs=119.2
Q ss_pred cCccCCceEEEEEeC-CCCEEEEEEccccc--ccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEecCCCCCh
Q 013004 307 LGRGGFGKVYKGRLA-DGKLVAVKRLKEER--TSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSV 383 (451)
Q Consensus 307 lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~gsL 383 (451)
||+|+||.||+|+.. +++.||+|.++... .......+.+|+.++..++||||+++++++...+..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 699999999999875 57899999986432 122334678999999999999999999999999999999999999999
Q ss_pred hHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 384 ASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 384 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
.+++.... .+++..+..++.|++.||.|||+. +|+||||||+|||++.++.++++||
T Consensus 81 ~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~HrDlkp~Nili~~~~~~kl~Df 137 (312)
T cd05585 81 FHHLQREG----RFDLSRARFYTAELLCALENLHKF---NVIYRDLKPENILLDYQGHIALCDF 137 (312)
T ss_pred HHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHeEECCCCcEEEEEC
Confidence 99997643 388999999999999999999998 9999999999999999999999998
No 62
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=99.90 E-value=5.7e-23 Score=201.26 Aligned_cols=136 Identities=26% Similarity=0.335 Sum_probs=119.7
Q ss_pred CccCccCCceEEEEEe-CCCCEEEEEEccccccc--ccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEecCCCC
Q 013004 305 NILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTS--GGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNG 381 (451)
Q Consensus 305 ~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~g 381 (451)
+.||+|+||+||+++. .+++.||+|.++..... .....+.+|++++..++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 4689999999999986 46899999998654321 22346788999999999999999999999999999999999999
Q ss_pred ChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhc-CCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 382 SVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHE-HCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 382 sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~-~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+|..++.... .+++.++..++.|++.||.|||+ . +|+||||||+|||++.++.+|++||
T Consensus 81 ~L~~~l~~~~----~l~~~~~~~~~~qi~~aL~~lH~~~---~ivHrDikp~NIll~~~~~~kL~Df 140 (325)
T cd05594 81 ELFFHLSRER----VFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDF 140 (325)
T ss_pred cHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhcC---CEEecCCCCCeEEECCCCCEEEecC
Confidence 9998886543 38999999999999999999997 6 8999999999999999999999998
No 63
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=99.90 E-value=2.9e-23 Score=206.23 Aligned_cols=142 Identities=20% Similarity=0.346 Sum_probs=125.8
Q ss_pred cCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccc--cccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEE
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 375 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (451)
++|+..+.||+|+||+||+++.. +++.||+|+++.... ......+.+|+.++..++|+||+++++.+.+.+..++||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 46888899999999999999864 588999999864321 222346788999999999999999999999999999999
Q ss_pred ecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 376 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 376 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.++++||
T Consensus 81 E~~~gg~L~~~l~~~~----~l~~~~~~~~~~qi~~~L~~lH~~---givHrDLkp~NIli~~~~~vkL~Df 145 (360)
T cd05627 81 EFLPGGDMMTLLMKKD----TLSEEATQFYIAETVLAIDAIHQL---GFIHRDIKPDNLLLDAKGHVKLSDF 145 (360)
T ss_pred eCCCCccHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEeec
Confidence 9999999999997643 378999999999999999999998 9999999999999999999999998
No 64
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=99.89 E-value=3.7e-23 Score=201.72 Aligned_cols=142 Identities=27% Similarity=0.483 Sum_probs=122.8
Q ss_pred cCCCCCCccCccCCceEEEEEeC-CCC----EEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeE
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA-DGK----LVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLL 373 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~-~~~----~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 373 (451)
.+|+..+.||+|+||.||+|++. +++ .||+|.++.........++.+|+.+++.++||||++++++|... ..++
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~ 85 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL 85 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Ccee
Confidence 46888999999999999999863 333 48999986543333445788999999999999999999998764 5789
Q ss_pred EEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 374 VYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 374 v~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
++||+++|+|.+++..... .+++.....++.|++.||+|||+. +|+||||||+|||+++++.+|++||
T Consensus 86 v~e~~~~g~l~~~l~~~~~---~~~~~~~~~~~~qi~~~L~~LH~~---~iiH~dlkp~Nill~~~~~~kl~Df 153 (316)
T cd05108 86 ITQLMPFGCLLDYVREHKD---NIGSQYLLNWCVQIAKGMNYLEER---RLVHRDLAARNVLVKTPQHVKITDF 153 (316)
T ss_pred eeecCCCCCHHHHHHhccc---cCCHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEecCCCcEEEccc
Confidence 9999999999999986532 378999999999999999999998 9999999999999999999999997
No 65
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=99.89 E-value=1.6e-23 Score=208.82 Aligned_cols=143 Identities=22% Similarity=0.284 Sum_probs=125.4
Q ss_pred HhcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccc--cccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeE
Q 013004 297 ATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLL 373 (451)
Q Consensus 297 ~~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 373 (451)
..++|+..+.||+|+||.||+|+.. +++.||+|.++.... ......+.+|+.+++.++||||+++++++.+.+..++
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~l 120 (370)
T cd05596 41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYM 120 (370)
T ss_pred CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence 4567888899999999999999864 688999999864321 1223357889999999999999999999999999999
Q ss_pred EEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 374 VYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 374 v~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
||||+++|+|.+++... .++...+..++.|++.||+|||+. +|+||||||+|||++.++.+||+||
T Consensus 121 v~Ey~~gg~L~~~l~~~-----~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~kL~Df 186 (370)
T cd05596 121 VMEYMPGGDLVNLMSNY-----DIPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADF 186 (370)
T ss_pred EEcCCCCCcHHHHHHhc-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEcCCCCEEEEec
Confidence 99999999999998653 267788889999999999999998 9999999999999999999999998
No 66
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.89 E-value=7.1e-23 Score=201.31 Aligned_cols=144 Identities=26% Similarity=0.361 Sum_probs=126.8
Q ss_pred hcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEe
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 376 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 376 (451)
.++|+..+.||+|+||.||+++.. +++.+|+|.++..........+.+|+++++.++|+||+++++++.+.+..++|||
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEe
Confidence 467888999999999999999875 5888999988654333334468999999999999999999999999999999999
Q ss_pred cCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 377 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 377 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|+++|+|.+++.... .+++.....++.|++.||.|||+.. +|+||||||+|||+++++.+|++||
T Consensus 84 ~~~~~~L~~~l~~~~----~~~~~~~~~~~~~l~~~l~~lH~~~--~ivH~dlkp~Nili~~~~~~kL~Df 148 (333)
T cd06650 84 HMDGGSLDQVLKKAG----RIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDF 148 (333)
T ss_pred cCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChhhEEEcCCCCEEEeeC
Confidence 999999999997643 3788899999999999999999741 6999999999999999999999998
No 67
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=99.89 E-value=4.1e-23 Score=202.84 Aligned_cols=143 Identities=22% Similarity=0.309 Sum_probs=125.5
Q ss_pred cCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccc--cccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEE
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 375 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (451)
++|+..+.||+|+||+||+++.. +++.||+|.++.... ......+.+|+.++..++|+||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 46888899999999999999864 588999999864221 122345889999999999999999999999999999999
Q ss_pred ecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 376 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 376 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
||+++|+|.+++.+... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.++++||
T Consensus 81 e~~~g~~L~~~l~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Df 146 (331)
T cd05597 81 DYYVGGDLLTLLSKFED---RLPEDMARFYLAEMVLAIDSVHQL---GYVHRDIKPDNVLLDKNGHIRLADF 146 (331)
T ss_pred ecCCCCcHHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEECCCCHHHEEECCCCCEEEEEC
Confidence 99999999999975322 378899999999999999999999 9999999999999999999999998
No 68
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=99.89 E-value=4.4e-23 Score=202.46 Aligned_cols=143 Identities=23% Similarity=0.307 Sum_probs=126.4
Q ss_pred cCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccc--cccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEE
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 375 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (451)
++|+..+.||+|+||.||+|+.. +++.||+|+++.... ......+.+|+.++..++|+||+++++++...+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 36788899999999999999864 688999999975432 122346889999999999999999999999999999999
Q ss_pred ecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 376 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 376 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
||+++|+|.+++..... .+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+|++||
T Consensus 81 e~~~~~~L~~~l~~~~~---~l~~~~~~~~~~qi~~aL~~lH~~---~i~H~Dlkp~NIll~~~~~~kL~Df 146 (330)
T cd05601 81 EYQPGGDLLSLLNRYED---QFDEDMAQFYLAELVLAIHSVHQM---GYVHRDIKPENVLIDRTGHIKLADF 146 (330)
T ss_pred CCCCCCCHHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEcccCchHheEECCCCCEEeccC
Confidence 99999999999976532 488999999999999999999999 9999999999999999999999998
No 69
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.89 E-value=6.7e-23 Score=201.29 Aligned_cols=144 Identities=26% Similarity=0.357 Sum_probs=127.1
Q ss_pred hcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEe
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 376 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 376 (451)
.++|+..+.||+|+||.||+++.. ++..||+|.++..........+.+|+.++..++||||+++++++...+..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEee
Confidence 467888999999999999999865 5889999998654333334478999999999999999999999999999999999
Q ss_pred cCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 377 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 377 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|+++|+|.+++.... .+++..+..++.|++.||.|||+.+ +|+||||||+|||+++++.++++||
T Consensus 84 ~~~~~~L~~~l~~~~----~~~~~~~~~~~~~i~~~l~~lH~~~--~ivH~dlkp~Nil~~~~~~~kl~Df 148 (331)
T cd06649 84 HMDGGSLDQVLKEAK----RIPEEILGKVSIAVLRGLAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDF 148 (331)
T ss_pred cCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHhhcC--CEEcCCCChhhEEEcCCCcEEEccC
Confidence 999999999997643 3788999999999999999999852 5999999999999999999999998
No 70
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=99.89 E-value=4.8e-23 Score=202.36 Aligned_cols=143 Identities=20% Similarity=0.275 Sum_probs=125.3
Q ss_pred cCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccc--cccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEE
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 375 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (451)
++|+..+.||+|+||.||+++.. +++.||+|.+..... ......+.+|+.++...+|+||+++++++.+.+..++||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 46888899999999999999864 578999999864321 122335788999999999999999999999999999999
Q ss_pred ecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 376 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 376 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
||+++|+|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+|++||
T Consensus 81 Ey~~gg~L~~~l~~~~~---~l~~~~~~~~~~qi~~~L~~lH~~---~iiHrDlkp~Nill~~~~~~kl~Df 146 (331)
T cd05624 81 DYYVGGDLLTLLSKFED---RLPEDMARFYIAEMVLAIHSIHQL---HYVHRDIKPDNVLLDMNGHIRLADF 146 (331)
T ss_pred eCCCCCcHHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCchHHEEEcCCCCEEEEec
Confidence 99999999999976422 378899999999999999999998 9999999999999999999999998
No 71
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=99.89 E-value=4.2e-23 Score=207.35 Aligned_cols=148 Identities=28% Similarity=0.394 Sum_probs=126.0
Q ss_pred HhcCCCCCCccCccCCceEEEEEeC------CCCEEEEEEcccccccccHHHHHHHHHHHhcCC-CCCccceeeEEecCC
Q 013004 297 ATDGFSNKNILGRGGFGKVYKGRLA------DGKLVAVKRLKEERTSGGELQFQTEVKIISMAV-HRNLLRLYGFCTTVT 369 (451)
Q Consensus 297 ~~~~f~~~~~lG~G~fg~Vy~~~~~------~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~ 369 (451)
..++|...+.||+|+||.||+|... .+..||||+++..........+.+|+.+++.+. |||||+++++|....
T Consensus 35 ~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~ 114 (400)
T cd05105 35 PRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSG 114 (400)
T ss_pred cccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCC
Confidence 4567888899999999999999752 134799999965443333457899999999996 999999999999999
Q ss_pred eeeEEEecCCCCChhHHhhccCC---------------------------------------------------------
Q 013004 370 EKLLVYPYMTNGSVASRLRERQS--------------------------------------------------------- 392 (451)
Q Consensus 370 ~~~lv~ey~~~gsL~~~l~~~~~--------------------------------------------------------- 392 (451)
..++||||+++|+|.+++.....
T Consensus 115 ~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (400)
T cd05105 115 PIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEI 194 (400)
T ss_pred ceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhh
Confidence 99999999999999998865321
Q ss_pred -----------------------------------CCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeC
Q 013004 393 -----------------------------------SLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLD 437 (451)
Q Consensus 393 -----------------------------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld 437 (451)
....+++.++..++.|+++||.|||+. +|+||||||+|||++
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dikp~Nill~ 271 (400)
T cd05105 195 KEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASK---NCVHRDLAARNVLLA 271 (400)
T ss_pred hhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHhEEEe
Confidence 012478888999999999999999998 999999999999999
Q ss_pred CCCCccchhh
Q 013004 438 EDADQSSKTI 447 (451)
Q Consensus 438 ~~~~~~i~df 447 (451)
+++.++++||
T Consensus 272 ~~~~~kL~Df 281 (400)
T cd05105 272 QGKIVKICDF 281 (400)
T ss_pred CCCEEEEEeC
Confidence 9999999997
No 72
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=99.89 E-value=3.7e-23 Score=206.20 Aligned_cols=149 Identities=23% Similarity=0.325 Sum_probs=129.4
Q ss_pred HHHHHHHhcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccc--cccHHHHHHHHHHHhcCCCCCccceeeEEec
Q 013004 291 LRELQVATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVKIISMAVHRNLLRLYGFCTT 367 (451)
Q Consensus 291 ~~~~~~~~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~ 367 (451)
+.+.....++|+..+.||+|+||.||+|+.. +++.||+|.++.... ......+.+|+.++..++||||+++++++..
T Consensus 35 ~~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~ 114 (371)
T cd05622 35 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 114 (371)
T ss_pred HhhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc
Confidence 4445556688999999999999999999875 588999999854221 1223357889999999999999999999999
Q ss_pred CCeeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 368 VTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 368 ~~~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
....++||||+++|+|.+++... .++...+..++.|++.||+|||+. +|+||||||+|||++.++.+||+||
T Consensus 115 ~~~~~lv~Ey~~gg~L~~~~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NIll~~~~~ikL~Df 186 (371)
T cd05622 115 DRYLYMVMEYMPGGDLVNLMSNY-----DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADF 186 (371)
T ss_pred CCEEEEEEcCCCCCcHHHHHHhc-----CCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHEEECCCCCEEEEeC
Confidence 99999999999999999998653 267888889999999999999999 9999999999999999999999998
No 73
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=99.89 E-value=3.3e-23 Score=204.86 Aligned_cols=142 Identities=26% Similarity=0.366 Sum_probs=126.6
Q ss_pred cCCCCCCccCccCCceEEEEEeC-CCCEEEEEEccccccc--ccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEE
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS--GGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 375 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (451)
++|...+.||+|+||+||+|+.. +++.||||+++..... .....+.+|+.++..++|+||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 36788899999999999999975 6899999998654321 23346889999999999999999999999999999999
Q ss_pred ecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 376 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 376 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.++++||
T Consensus 81 e~~~~~~L~~~l~~~~----~l~~~~~~~i~~qi~~aL~~LH~~---giiH~Dlkp~NIll~~~~~~kL~Df 145 (350)
T cd05573 81 EYMPGGDLMNLLIRKD----VFPEETARFYIAELVLALDSVHKL---GFIHRDIKPDNILIDADGHIKLADF 145 (350)
T ss_pred cCCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEeecC
Confidence 9999999999997652 388999999999999999999998 9999999999999999999999998
No 74
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=99.89 E-value=7.8e-23 Score=193.06 Aligned_cols=141 Identities=29% Similarity=0.443 Sum_probs=125.8
Q ss_pred cCCCCCCccCccCCceEEEEEeCCCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEecC
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYM 378 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~ 378 (451)
++|+..+.||+|+||.||+++++++..+|+|.++... .....+.+|+.+++.++||||+++++++......+++|||+
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~ 81 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGA--MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFM 81 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCC--ccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcC
Confidence 4577788999999999999998888889999886432 22347889999999999999999999999999999999999
Q ss_pred CCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 379 TNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 379 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
++|+|.++++.... .++|..+..++.|++.||.|||+. +|+||||||+||++++++.++++||
T Consensus 82 ~~~~L~~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~d~ 144 (256)
T cd05114 82 ENGCLLNYLRQRQG---KLSKDMLLSMCQDVCEGMEYLERN---SFIHRDLAARNCLVSSTGVVKVSDF 144 (256)
T ss_pred CCCcHHHHHHhCcc---CCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcceEEEcCCCeEEECCC
Confidence 99999999876432 378999999999999999999998 9999999999999999999999997
No 75
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=99.89 E-value=1e-22 Score=193.30 Aligned_cols=144 Identities=31% Similarity=0.463 Sum_probs=127.3
Q ss_pred hcCCCCCCccCccCCceEEEEEeCC----CCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeE
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLAD----GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLL 373 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~~----~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 373 (451)
.++|+..+.||+|+||+||+|++.. ...||||.++..........|.+|+.++..++||||+++++++...+..++
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~i 82 (266)
T cd05033 3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMI 82 (266)
T ss_pred hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEE
Confidence 3568888999999999999998742 457999998755443344578999999999999999999999999999999
Q ss_pred EEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 374 VYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 374 v~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+|||+++|+|.+++..... .+++..+..++.|++.|++|||+. +|+||||||+||++++++.++++||
T Consensus 83 v~e~~~~~~L~~~~~~~~~---~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~di~p~nili~~~~~~~l~df 150 (266)
T cd05033 83 ITEYMENGSLDKFLRENDG---KFTVGQLVGMLRGIASGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDF 150 (266)
T ss_pred EEEcCCCCCHHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCCEEECcc
Confidence 9999999999999976432 489999999999999999999998 9999999999999999999999997
No 76
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=99.89 E-value=7.2e-23 Score=199.91 Aligned_cols=136 Identities=29% Similarity=0.373 Sum_probs=120.0
Q ss_pred CccCccCCceEEEEEe----CCCCEEEEEEccccccc-ccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEecCC
Q 013004 305 NILGRGGFGKVYKGRL----ADGKLVAVKRLKEERTS-GGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMT 379 (451)
Q Consensus 305 ~~lG~G~fg~Vy~~~~----~~~~~vAvK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~ 379 (451)
+.||+|+||.||+++. .+|+.||+|+++..... .....+..|+.++..++||||+++++++.+.+..++||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 5799999999999875 35789999998654322 223357789999999999999999999999999999999999
Q ss_pred CCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 380 NGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 380 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+|+|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+||++++++.++++||
T Consensus 82 ~~~L~~~l~~~~----~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kL~Df 142 (318)
T cd05582 82 GGDLFTRLSKEV----MFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDF 142 (318)
T ss_pred CCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHeEECCCCcEEEeec
Confidence 999999986543 389999999999999999999998 9999999999999999999999998
No 77
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=99.89 E-value=7.6e-23 Score=196.02 Aligned_cols=138 Identities=30% Similarity=0.413 Sum_probs=119.8
Q ss_pred cCccCCceEEEEEeC-CCCEEEEEEcccccccc--cHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEecCCCCCh
Q 013004 307 LGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSG--GELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSV 383 (451)
Q Consensus 307 lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~gsL 383 (451)
||+|+||+||+++.. +++.||+|.+....... ....+..|+++++.++|+||+++.+++......++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 699999999999864 68899999986433221 224578899999999999999999999999999999999999999
Q ss_pred hHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 384 ASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 384 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
...+.........+++..+..++.|++.||.|||+. +|+||||||+||++++++.++++||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~df 141 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQR---RIIYRDLKPENVLLDNDGNVRISDL 141 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeC
Confidence 988865433334589999999999999999999998 9999999999999999999999998
No 78
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=99.89 E-value=8e-23 Score=200.08 Aligned_cols=136 Identities=27% Similarity=0.366 Sum_probs=119.2
Q ss_pred CccCccCCceEEEEEe----CCCCEEEEEEcccccc---cccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEec
Q 013004 305 NILGRGGFGKVYKGRL----ADGKLVAVKRLKEERT---SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 377 (451)
Q Consensus 305 ~~lG~G~fg~Vy~~~~----~~~~~vAvK~~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey 377 (451)
+.||+|+||.||+++. .+++.||||.++.... ......+.+|+.++..++||||+++++++...+..++||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 6799999999999975 2578999999865321 12233578899999999999999999999999999999999
Q ss_pred CCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 378 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 378 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+++|+|.+++.... .+.+..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+||
T Consensus 82 ~~~~~L~~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Df 144 (323)
T cd05584 82 LSGGELFMHLEREG----IFMEDTACFYLSEISLALEHLHQQ---GIIYRDLKPENILLDAQGHVKLTDF 144 (323)
T ss_pred CCCchHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEeeC
Confidence 99999999987643 377888899999999999999998 9999999999999999999999998
No 79
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=99.89 E-value=2e-23 Score=214.96 Aligned_cols=144 Identities=26% Similarity=0.397 Sum_probs=123.4
Q ss_pred CCCCCCccCccCCceEEEEEeCCC-CEEEEEEcccccccccHHHHHHHHHHHhcCC-CCCccceee-EEec------CCe
Q 013004 300 GFSNKNILGRGGFGKVYKGRLADG-KLVAVKRLKEERTSGGELQFQTEVKIISMAV-HRNLLRLYG-FCTT------VTE 370 (451)
Q Consensus 300 ~f~~~~~lG~G~fg~Vy~~~~~~~-~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~-~~~~------~~~ 370 (451)
++++.++|.+|||+.||.|+...+ ..||+|++-.. .........+|+.+|+.++ |+|||.+++ .... ..+
T Consensus 38 ~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~-de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~E 116 (738)
T KOG1989|consen 38 RVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN-DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWE 116 (738)
T ss_pred EEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC-CHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeE
Confidence 345568899999999999997655 99999998543 2334457899999999998 999999999 3321 246
Q ss_pred eeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 371 KLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 371 ~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
.+|.||||.+|.|-+++..+... .|++.++++|+.++++|+++||.. +|+|||||||.+||||+.++.-|++||
T Consensus 117 vllLmEyC~gg~Lvd~mn~Rlq~--~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLCDF 190 (738)
T KOG1989|consen 117 VLLLMEYCKGGSLVDFMNTRLQT--RLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLCDF 190 (738)
T ss_pred EEeehhhccCCcHHHHHHHHHhc--cCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeCcc
Confidence 78999999999999999876543 399999999999999999999996 889999999999999999999999998
No 80
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=99.89 E-value=4.4e-23 Score=204.46 Aligned_cols=138 Identities=24% Similarity=0.354 Sum_probs=119.3
Q ss_pred cCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEec
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 377 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey 377 (451)
++|+..+.||+|+||.||+|+.. +++.||||.+...........+.+|+++++.++|+||+++++++...+..++||||
T Consensus 74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 153 (353)
T PLN00034 74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEF 153 (353)
T ss_pred HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEec
Confidence 34556688999999999999864 68999999986543333344689999999999999999999999999999999999
Q ss_pred CCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 378 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 378 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+++|+|.... ...+.....++.|++.||.|||+. +|+||||||+|||+++++.+||+||
T Consensus 154 ~~~~~L~~~~--------~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~Df 212 (353)
T PLN00034 154 MDGGSLEGTH--------IADEQFLADVARQILSGIAYLHRR---HIVHRDIKPSNLLINSAKNVKIADF 212 (353)
T ss_pred CCCCcccccc--------cCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEccc
Confidence 9999986432 245677888999999999999999 9999999999999999999999998
No 81
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=99.89 E-value=1.3e-22 Score=190.89 Aligned_cols=137 Identities=31% Similarity=0.500 Sum_probs=121.7
Q ss_pred CccCccCCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEecCCCCCh
Q 013004 305 NILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSV 383 (451)
Q Consensus 305 ~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~gsL 383 (451)
+.||+|+||.||+|+.. +++.||+|.+......+....+.+|+++++.++||||+++++++......++|+||+++++|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF 80 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence 46899999999999864 68899999886543333345789999999999999999999999999999999999999999
Q ss_pred hHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 384 ASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 384 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
.+++.... ..++|.++..++.|++.||.|||+. +|+||||||+||+++.++.++++||
T Consensus 81 ~~~~~~~~---~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~kl~df 138 (252)
T cd05084 81 LTFLRTEG---PRLKVKELIQMVENAAAGMEYLESK---HCIHRDLAARNCLVTEKNVLKISDF 138 (252)
T ss_pred HHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEEcCCCcEEECcc
Confidence 99997543 2478999999999999999999998 9999999999999999999999998
No 82
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=99.89 E-value=8.9e-23 Score=199.81 Aligned_cols=141 Identities=25% Similarity=0.349 Sum_probs=122.0
Q ss_pred CCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccc--cccHHHHHHHHHHHhcCCCC-CccceeeEEecCCeeeEEE
Q 013004 300 GFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVKIISMAVHR-NLLRLYGFCTTVTEKLLVY 375 (451)
Q Consensus 300 ~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~H~-niv~l~~~~~~~~~~~lv~ 375 (451)
+|+..+.||+|+||.||+|+.. +++.||||+++.... ......+..|++++..++|+ +|+++++++...+..++||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 4777899999999999999865 578999999865432 22334678899999988765 5888999999999999999
Q ss_pred ecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 376 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 376 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||+++++.++++||
T Consensus 81 E~~~~g~L~~~~~~~~----~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kL~Df 145 (324)
T cd05587 81 EYVNGGDLMYHIQQVG----KFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDAEGHIKIADF 145 (324)
T ss_pred cCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEEcCCCCEEEeec
Confidence 9999999999987643 378999999999999999999998 9999999999999999999999998
No 83
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=99.89 E-value=1.1e-22 Score=199.71 Aligned_cols=136 Identities=25% Similarity=0.355 Sum_probs=119.6
Q ss_pred CccCccCCceEEEEEeC-CCCEEEEEEccccccc--ccHHHHHHHHHHHhcC-CCCCccceeeEEecCCeeeEEEecCCC
Q 013004 305 NILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS--GGELQFQTEVKIISMA-VHRNLLRLYGFCTTVTEKLLVYPYMTN 380 (451)
Q Consensus 305 ~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~--~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~ey~~~ 380 (451)
++||+|+||.||+|+.. +++.||+|.++..... .....+.+|..++..+ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 46899999999999864 6889999999754322 2233578899999888 699999999999999999999999999
Q ss_pred CChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 381 GSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 381 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|+|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+|||++.++.++++||
T Consensus 81 g~L~~~~~~~~----~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nili~~~~~~kL~Df 140 (329)
T cd05588 81 GDLMFHMQRQR----KLPEEHARFYSAEISLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDY 140 (329)
T ss_pred CCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEECcC
Confidence 99998886543 389999999999999999999999 9999999999999999999999998
No 84
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=99.89 E-value=1.1e-22 Score=198.91 Aligned_cols=136 Identities=29% Similarity=0.418 Sum_probs=118.5
Q ss_pred CccCccCCceEEEEEeC-CCCEEEEEEcccccc--cccHHHHHHHHHHHhcC-CCCCccceeeEEecCCeeeEEEecCCC
Q 013004 305 NILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVKIISMA-VHRNLLRLYGFCTTVTEKLLVYPYMTN 380 (451)
Q Consensus 305 ~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~ey~~~ 380 (451)
++||+|+||+||+|+.. +++.||+|+++.... ......+..|.+++..+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 46999999999999865 578999999865432 22234577888888765 799999999999999999999999999
Q ss_pred CChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 381 GSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 381 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|+|...+.... .+++..+..++.|++.||.|||+. +|+||||||+|||++.++.++++||
T Consensus 81 ~~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~Nill~~~~~~kL~Df 140 (321)
T cd05591 81 GDLMFQIQRSR----KFDEPRSRFYAAEVTLALMFLHRH---GVIYRDLKLDNILLDAEGHCKLADF 140 (321)
T ss_pred CcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeec
Confidence 99999887643 378999999999999999999999 9999999999999999999999998
No 85
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=99.89 E-value=1.3e-22 Score=192.88 Aligned_cols=139 Identities=28% Similarity=0.367 Sum_probs=118.3
Q ss_pred ccCccCCceEEEEEeCC---CCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEecCCCCC
Q 013004 306 ILGRGGFGKVYKGRLAD---GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGS 382 (451)
Q Consensus 306 ~lG~G~fg~Vy~~~~~~---~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~gs 382 (451)
.||+|+||+||+|+..+ ...+|+|.+...........|.+|+..++.++|+||+++++++......++||||+++|+
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~ 81 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGD 81 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCc
Confidence 58999999999997533 356888887544333334468899999999999999999999999999999999999999
Q ss_pred hhHHhhccCCC-CCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 383 VASRLRERQSS-LPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 383 L~~~l~~~~~~-~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|.+++...... ....++.....++.|++.|++|||+. +|+||||||+|||+++++.+|++||
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~df 144 (269)
T cd05042 82 LKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQA---DFIHSDLALRNCQLTADLSVKIGDY 144 (269)
T ss_pred HHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhc---CEecccccHhheEecCCCcEEEecc
Confidence 99999765321 22356788889999999999999999 9999999999999999999999997
No 86
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.89 E-value=1e-22 Score=200.00 Aligned_cols=141 Identities=26% Similarity=0.319 Sum_probs=122.6
Q ss_pred CCCCCCccCccCCceEEEEEe----CCCCEEEEEEcccccc---cccHHHHHHHHHHHhcCC-CCCccceeeEEecCCee
Q 013004 300 GFSNKNILGRGGFGKVYKGRL----ADGKLVAVKRLKEERT---SGGELQFQTEVKIISMAV-HRNLLRLYGFCTTVTEK 371 (451)
Q Consensus 300 ~f~~~~~lG~G~fg~Vy~~~~----~~~~~vAvK~~~~~~~---~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~ 371 (451)
+|+..+.||+|+||.||+++. .+++.||+|+++.... ......+.+|+.++..++ |+||+++++++...+..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 467788999999999999975 2578999999864321 112335788999999995 99999999999999999
Q ss_pred eEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 372 LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 372 ~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
++||||+++|+|.+++.... .+++.+...++.|++.||+|||+. +|+||||||+|||++.++.++|+||
T Consensus 81 ~lv~e~~~~g~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nili~~~~~~kl~Df 149 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQRD----NFSEDEVRFYSGEIILALEHLHKL---GIVYRDIKLENILLDSEGHVVLTDF 149 (332)
T ss_pred EEEEeCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHeEECCCCCEEEeeC
Confidence 99999999999999997653 388999999999999999999998 9999999999999999999999998
No 87
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=99.89 E-value=1.1e-22 Score=199.87 Aligned_cols=143 Identities=21% Similarity=0.287 Sum_probs=125.0
Q ss_pred cCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccc--cccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEE
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 375 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (451)
++|+..+.||+|+||.||+++.+ +++.||+|.+..... ......+.+|+.++..++|+||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 46788899999999999999875 478899999854321 122335888999999999999999999999999999999
Q ss_pred ecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 376 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 376 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
||+++|+|.+++.+... .+++..+..++.|++.||.|||+. +|+||||||+|||++.++.++++||
T Consensus 81 ey~~~g~L~~~l~~~~~---~l~~~~~~~~~~qi~~al~~lH~~---~iiHrDlkp~Nili~~~~~~kL~Df 146 (332)
T cd05623 81 DYYVGGDLLTLLSKFED---RLPEDMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADF 146 (332)
T ss_pred eccCCCcHHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEeec
Confidence 99999999999976422 378999999999999999999998 9999999999999999999999998
No 88
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=99.89 E-value=5.2e-23 Score=194.90 Aligned_cols=139 Identities=35% Similarity=0.597 Sum_probs=119.9
Q ss_pred CCccCccCCceEEEEEeC-----CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEecC
Q 013004 304 KNILGRGGFGKVYKGRLA-----DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYM 378 (451)
Q Consensus 304 ~~~lG~G~fg~Vy~~~~~-----~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~ 378 (451)
.+.||+|+||.||+|.+. .+..|+||.++..........|.+|+..+.+++||||++++|++...+..++|+||+
T Consensus 4 ~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~~ 83 (259)
T PF07714_consen 4 IKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEYC 83 (259)
T ss_dssp EEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE--
T ss_pred eeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccccccccccccccc
Confidence 467999999999999875 256899999966443334568999999999999999999999999888899999999
Q ss_pred CCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 379 TNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 379 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
++|+|.+++..... ..+++..+..++.|+++||.|||+. +++|+||+++||++++++.+|++||
T Consensus 84 ~~g~L~~~L~~~~~--~~~~~~~~~~i~~~i~~~l~~Lh~~---~iiH~~l~~~nill~~~~~~Kl~~f 147 (259)
T PF07714_consen 84 PGGSLDDYLKSKNK--EPLSEQQRLSIAIQIAEALSYLHSN---NIIHGNLSPSNILLDSNGQVKLSDF 147 (259)
T ss_dssp TTEBHHHHHHHTCT--TTSBHHHHHHHHHHHHHHHHHHHHT---TEEEST-SGGGEEEETTTEEEEEST
T ss_pred cccccccccccccc--ccccccccccccccccccccccccc---ccccccccccccccccccccccccc
Confidence 99999999988622 2489999999999999999999999 9999999999999999999999998
No 89
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.89 E-value=3.8e-23 Score=203.16 Aligned_cols=140 Identities=25% Similarity=0.392 Sum_probs=124.9
Q ss_pred cCCCCCCccCccCCceEEEEE-eCCCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEec
Q 013004 299 DGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 377 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~-~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey 377 (451)
..|+....||+|+.|.||.|+ ..+++.||||++..... ....-..+|+.+|...+|+|||.+++.|...+++|.||||
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q-~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEy 351 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQ-PKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEY 351 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccC-CchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEee
Confidence 457777889999999999997 45789999999855432 2233578999999999999999999999999999999999
Q ss_pred CCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 378 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 378 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|++|+|.+.+... .+++.+...|+.++++||+|||.+ +|+|||||.+|||++.+|.+||.||
T Consensus 352 m~ggsLTDvVt~~-----~~~E~qIA~Icre~l~aL~fLH~~---gIiHrDIKSDnILL~~~g~vKltDF 413 (550)
T KOG0578|consen 352 MEGGSLTDVVTKT-----RMTEGQIAAICREILQGLKFLHAR---GIIHRDIKSDNILLTMDGSVKLTDF 413 (550)
T ss_pred cCCCchhhhhhcc-----cccHHHHHHHHHHHHHHHHHHHhc---ceeeeccccceeEeccCCcEEEeee
Confidence 9999999988764 389999999999999999999999 9999999999999999999999998
No 90
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=99.88 E-value=1.1e-22 Score=194.45 Aligned_cols=148 Identities=26% Similarity=0.419 Sum_probs=126.5
Q ss_pred HhcCCCCCCccCccCCceEEEEEeC------CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCe
Q 013004 297 ATDGFSNKNILGRGGFGKVYKGRLA------DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTE 370 (451)
Q Consensus 297 ~~~~f~~~~~lG~G~fg~Vy~~~~~------~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 370 (451)
..++|+..+.||+|+||.||+|.+. ++..||||.++.........++.+|+.+++.++||||+++++++.....
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~ 83 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP 83 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 4667888999999999999999753 2467999998643322234468899999999999999999999999999
Q ss_pred eeEEEecCCCCChhHHhhccCCC------CCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccc
Q 013004 371 KLLVYPYMTNGSVASRLRERQSS------LPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSS 444 (451)
Q Consensus 371 ~~lv~ey~~~gsL~~~l~~~~~~------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i 444 (451)
.++||||+++|+|.+++...... ...++|..+..++.|++.||.|||+. +++||||||+||++++++.+++
T Consensus 84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~vH~dlkp~Nil~~~~~~~~l 160 (277)
T cd05062 84 TLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKI 160 (277)
T ss_pred eEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCcchheEEEcCCCCEEE
Confidence 99999999999999998753221 23468889999999999999999998 9999999999999999999999
Q ss_pred hhh
Q 013004 445 KTI 447 (451)
Q Consensus 445 ~df 447 (451)
+||
T Consensus 161 ~df 163 (277)
T cd05062 161 GDF 163 (277)
T ss_pred CCC
Confidence 997
No 91
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=99.88 E-value=9.4e-23 Score=204.78 Aligned_cols=149 Identities=26% Similarity=0.389 Sum_probs=126.2
Q ss_pred HHhcCCCCCCccCccCCceEEEEEeC------CCCEEEEEEcccccccccHHHHHHHHHHHhcCC-CCCccceeeEEecC
Q 013004 296 VATDGFSNKNILGRGGFGKVYKGRLA------DGKLVAVKRLKEERTSGGELQFQTEVKIISMAV-HRNLLRLYGFCTTV 368 (451)
Q Consensus 296 ~~~~~f~~~~~lG~G~fg~Vy~~~~~------~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~ 368 (451)
...++|...+.||+|+||.||+|+++ .++.||+|+++..........+.+|+.++..+. |||||+++++|...
T Consensus 34 ~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~ 113 (401)
T cd05107 34 MPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKG 113 (401)
T ss_pred ecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccC
Confidence 34456777899999999999999863 246899999975433333346889999999997 99999999999999
Q ss_pred CeeeEEEecCCCCChhHHhhccCC--------------------------------------------------------
Q 013004 369 TEKLLVYPYMTNGSVASRLRERQS-------------------------------------------------------- 392 (451)
Q Consensus 369 ~~~~lv~ey~~~gsL~~~l~~~~~-------------------------------------------------------- 392 (451)
+..++|+||+++|+|.++++....
T Consensus 114 ~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (401)
T cd05107 114 GPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQ 193 (401)
T ss_pred CCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchh
Confidence 999999999999999999975321
Q ss_pred --------------------------------------CCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCce
Q 013004 393 --------------------------------------SLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANI 434 (451)
Q Consensus 393 --------------------------------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NI 434 (451)
....++|.....++.|++.||+|||+. +|+||||||+||
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrdlkp~Ni 270 (401)
T cd05107 194 DMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASK---NCVHRDLAARNV 270 (401)
T ss_pred cchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CcCcccCCcceE
Confidence 112468888899999999999999998 999999999999
Q ss_pred eeCCCCCccchhh
Q 013004 435 LLDEDADQSSKTI 447 (451)
Q Consensus 435 Lld~~~~~~i~df 447 (451)
|+++++.++++||
T Consensus 271 Ll~~~~~~kL~Df 283 (401)
T cd05107 271 LICEGKLVKICDF 283 (401)
T ss_pred EEeCCCEEEEEec
Confidence 9999999999997
No 92
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=99.88 E-value=1.5e-22 Score=198.66 Aligned_cols=136 Identities=27% Similarity=0.374 Sum_probs=118.4
Q ss_pred CccCccCCceEEEEEeC-CCCEEEEEEccccccc--ccHHHHHHHHHHHhcC-CCCCccceeeEEecCCeeeEEEecCCC
Q 013004 305 NILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS--GGELQFQTEVKIISMA-VHRNLLRLYGFCTTVTEKLLVYPYMTN 380 (451)
Q Consensus 305 ~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~--~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~ey~~~ 380 (451)
+.||+|+||+||+|+.. +++.||+|.++..... .....+.+|+.++..+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 46999999999999864 5789999999754322 2223577888888766 799999999999999999999999999
Q ss_pred CChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 381 GSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 381 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|+|..++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++|+||
T Consensus 81 ~~L~~~~~~~~----~l~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dikp~Nili~~~~~~kL~Df 140 (329)
T cd05618 81 GDLMFHMQRQR----KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDY 140 (329)
T ss_pred CCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCCEEEeeC
Confidence 99998886543 388999999999999999999999 9999999999999999999999998
No 93
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=99.88 E-value=1.6e-22 Score=196.52 Aligned_cols=142 Identities=25% Similarity=0.439 Sum_probs=124.3
Q ss_pred cCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEec
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 377 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey 377 (451)
++|...+.||+|+||.||+|+.+ +++.||+|.++..........+.+|+.+++.++||||+++++++...+..++||||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 85 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY 85 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence 46778899999999999999864 57889999987544333344678999999999999999999999999999999999
Q ss_pred CCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 378 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 378 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+++ ++.+++..... .+++..+..++.|++.||+|||+. +|+||||||+||++++++.++++||
T Consensus 86 ~~~-~l~~~~~~~~~---~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Df 148 (309)
T cd07872 86 LDK-DLKQYMDDCGN---IMSMHNVKIFLYQILRGLAYCHRR---KVLHRDLKPQNLLINERGELKLADF 148 (309)
T ss_pred CCC-CHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECcc
Confidence 975 88888865432 378899999999999999999998 9999999999999999999999998
No 94
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=99.88 E-value=1.2e-22 Score=198.89 Aligned_cols=139 Identities=29% Similarity=0.416 Sum_probs=118.9
Q ss_pred CCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccc--cccHHHHHHHHHHH---hcCCCCCccceeeEEecCCeeeEE
Q 013004 301 FSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVKII---SMAVHRNLLRLYGFCTTVTEKLLV 374 (451)
Q Consensus 301 f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~~E~~~l---~~l~H~niv~l~~~~~~~~~~~lv 374 (451)
|...+.||+|+||.||+|+.. +++.||||.++.... ......+.+|++++ ..++||||+++++++...+..++|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 455688999999999999864 689999999965421 12223566666554 567899999999999999999999
Q ss_pred EecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 375 YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 375 ~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|||+++|+|...+... .+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+|++||
T Consensus 81 ~E~~~~~~L~~~~~~~-----~l~~~~~~~~~~qi~~al~~lH~~---~ivHrdlkp~Nill~~~~~~kL~Df 145 (324)
T cd05589 81 MEYAAGGDLMMHIHTD-----VFSEPRAVFYAACVVLGLQYLHEN---KIVYRDLKLDNLLLDTEGFVKIADF 145 (324)
T ss_pred EcCCCCCcHHHHhhcC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCcEEeCcc
Confidence 9999999999888643 389999999999999999999998 9999999999999999999999998
No 95
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=99.88 E-value=1.9e-22 Score=191.68 Aligned_cols=143 Identities=29% Similarity=0.439 Sum_probs=125.1
Q ss_pred cCCCCCCccCccCCceEEEEEeC-C---CCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEE
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA-D---GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLV 374 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~-~---~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 374 (451)
++|+..+.||+|+||.||+|+.. + +..+|+|.++..........+.+|+.++..++||||+++++++...+..+++
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV 83 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence 45777899999999999999863 2 3379999986544333345789999999999999999999999999999999
Q ss_pred EecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 375 YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 375 ~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|||+++|+|.+++..... .+++.+...++.|++.|+.|||+. +++||||||+||+++.++.++++||
T Consensus 84 ~e~~~~~~L~~~~~~~~~---~~~~~~~~~i~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~~l~df 150 (267)
T cd05066 84 TEYMENGSLDAFLRKHDG---QFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILVNSNLVCKVSDF 150 (267)
T ss_pred EEcCCCCCHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHHC---CEeehhhchhcEEECCCCeEEeCCC
Confidence 999999999999976432 479999999999999999999998 9999999999999999999999997
No 96
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=99.88 E-value=1.3e-22 Score=195.09 Aligned_cols=149 Identities=27% Similarity=0.434 Sum_probs=126.6
Q ss_pred HHhcCCCCCCccCccCCceEEEEEeC------CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCC
Q 013004 296 VATDGFSNKNILGRGGFGKVYKGRLA------DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVT 369 (451)
Q Consensus 296 ~~~~~f~~~~~lG~G~fg~Vy~~~~~------~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~ 369 (451)
+..++|+..+.||+|+||.||+|..+ .+..||+|.++..........+.+|+.+++.++|+||+++++++....
T Consensus 3 ~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 82 (288)
T cd05061 3 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQ 82 (288)
T ss_pred ccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC
Confidence 34677888999999999999999753 245799998865433333346889999999999999999999999999
Q ss_pred eeeEEEecCCCCChhHHhhccCC------CCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCcc
Q 013004 370 EKLLVYPYMTNGSVASRLRERQS------SLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQS 443 (451)
Q Consensus 370 ~~~lv~ey~~~gsL~~~l~~~~~------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~ 443 (451)
..++||||+++|+|.+++..... .....++.....++.|++.||.|||++ +|+||||||+||++++++.++
T Consensus 83 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dikp~nili~~~~~~~ 159 (288)
T cd05061 83 PTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVK 159 (288)
T ss_pred CcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCCChheEEEcCCCcEE
Confidence 99999999999999999975321 123457788899999999999999998 999999999999999999999
Q ss_pred chhh
Q 013004 444 SKTI 447 (451)
Q Consensus 444 i~df 447 (451)
++||
T Consensus 160 L~Df 163 (288)
T cd05061 160 IGDF 163 (288)
T ss_pred ECcC
Confidence 9997
No 97
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=99.88 E-value=1.9e-22 Score=196.80 Aligned_cols=136 Identities=26% Similarity=0.409 Sum_probs=116.1
Q ss_pred CccCccCCceEEEEEeC-CCCEEEEEEcccccc--cccHHHHHHHHHHHhc-CCCCCccceeeEEecCCeeeEEEecCCC
Q 013004 305 NILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVKIISM-AVHRNLLRLYGFCTTVTEKLLVYPYMTN 380 (451)
Q Consensus 305 ~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~-l~H~niv~l~~~~~~~~~~~lv~ey~~~ 380 (451)
++||+|+||+||+|+.. +++.||+|.++.... ......+..|..++.. .+||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999864 578999999875432 1223345566666654 4799999999999999999999999999
Q ss_pred CChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 381 GSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 381 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|+|..++.... .+++.....++.|++.||.|||+. +|+||||||+|||++.++.+|++||
T Consensus 81 g~L~~~~~~~~----~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dlkp~Nill~~~~~~kL~Df 140 (316)
T cd05592 81 GDLMFHIQSSG----RFDEARARFYAAEIICGLQFLHKK---GIIYRDLKLDNVLLDKDGHIKIADF 140 (316)
T ss_pred CcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHeEECCCCCEEEccC
Confidence 99999987643 378899999999999999999998 9999999999999999999999998
No 98
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=99.88 E-value=1.5e-22 Score=197.84 Aligned_cols=136 Identities=31% Similarity=0.457 Sum_probs=118.5
Q ss_pred CccCccCCceEEEEEeC-CCCEEEEEEcccccc--cccHHHHHHHHHHHhcC-CCCCccceeeEEecCCeeeEEEecCCC
Q 013004 305 NILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVKIISMA-VHRNLLRLYGFCTTVTEKLLVYPYMTN 380 (451)
Q Consensus 305 ~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~ey~~~ 380 (451)
+.||+|+||.||+|+.. +++.||||.++.... ......+..|..++... +||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 46899999999999864 588999999865421 22334577888888766 699999999999999999999999999
Q ss_pred CChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 381 GSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 381 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||+++++.++++||
T Consensus 81 g~L~~~i~~~~----~l~~~~~~~~~~ql~~~L~~lH~~---~ivH~dlkp~NIli~~~~~~kL~Df 140 (320)
T cd05590 81 GDLMFHIQKSR----RFDEARARFYAAEITSALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADF 140 (320)
T ss_pred chHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeeC
Confidence 99999887653 388999999999999999999998 9999999999999999999999998
No 99
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.88 E-value=1.9e-22 Score=193.40 Aligned_cols=146 Identities=29% Similarity=0.454 Sum_probs=125.0
Q ss_pred cCCCCCCccCccCCceEEEEEe-----CCCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeE
Q 013004 299 DGFSNKNILGRGGFGKVYKGRL-----ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLL 373 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~-----~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 373 (451)
++|+..+.||+|+||+||+|.. .+++.||+|.++..........+.+|+++++.++||||+++++++......++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 84 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM 84 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence 4577788999999999999974 24578999998754333333578899999999999999999999999999999
Q ss_pred EEecCCCCChhHHhhccCC-------------CCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCC
Q 013004 374 VYPYMTNGSVASRLRERQS-------------SLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDA 440 (451)
Q Consensus 374 v~ey~~~gsL~~~l~~~~~-------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~ 440 (451)
+|||+++|+|.+++..... ....+++.+...++.|++.||.|||+. +|+||||||+|||+++++
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~nili~~~~ 161 (283)
T cd05090 85 LFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH---FFVHKDLAARNILIGEQL 161 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc---CeehhccccceEEEcCCC
Confidence 9999999999999864321 012478899999999999999999998 999999999999999999
Q ss_pred Cccchhh
Q 013004 441 DQSSKTI 447 (451)
Q Consensus 441 ~~~i~df 447 (451)
.++++||
T Consensus 162 ~~kl~df 168 (283)
T cd05090 162 HVKISDL 168 (283)
T ss_pred cEEeccc
Confidence 9999997
No 100
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=99.88 E-value=1.9e-22 Score=197.25 Aligned_cols=136 Identities=27% Similarity=0.386 Sum_probs=115.9
Q ss_pred CccCccCCceEEEEEeC-CCCEEEEEEcccccc--cccHHHHHHHHH-HHhcCCCCCccceeeEEecCCeeeEEEecCCC
Q 013004 305 NILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVK-IISMAVHRNLLRLYGFCTTVTEKLLVYPYMTN 380 (451)
Q Consensus 305 ~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~~E~~-~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~ 380 (451)
++||+|+||.||+|+.. +++.||+|.+..... ......+.+|.. +++.++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999874 588999999864321 112234555554 57889999999999999999999999999999
Q ss_pred CChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 381 GSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 381 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|+|...+.... .+++.....++.|++.||.|||+. +|+||||||+||+++.++.+|++||
T Consensus 81 ~~L~~~l~~~~----~~~~~~~~~~~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~kl~Df 140 (321)
T cd05603 81 GELFFHLQRER----CFLEPRARFYAAEVASAIGYLHSL---NIIYRDLKPENILLDSQGHVVLTDF 140 (321)
T ss_pred CCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEccC
Confidence 99998886543 378888899999999999999998 9999999999999999999999998
No 101
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=99.88 E-value=1.4e-22 Score=194.74 Aligned_cols=142 Identities=30% Similarity=0.411 Sum_probs=123.8
Q ss_pred CCCCCccCccCCceEEEEEe-CCCCEEEEEEccccccc--ccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEec
Q 013004 301 FSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTS--GGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 377 (451)
Q Consensus 301 f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey 377 (451)
|+..+.||+|+||+||++.. .+++.||+|.+...... .....+.+|+.++..++||||+++++++.+.+..++||||
T Consensus 2 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05605 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEec
Confidence 66778999999999999986 46889999998643221 1223578899999999999999999999999999999999
Q ss_pred CCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 378 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 378 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+++|+|.+++..... ..+++..+..++.|++.||.|||+. +|+||||||+||++++++.++++||
T Consensus 82 ~~~~~L~~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~Df 146 (285)
T cd05605 82 MNGGDLKFHIYNMGN--PGFDEERAVFYAAEITCGLEDLHRE---RIVYRDLKPENILLDDYGHIRISDL 146 (285)
T ss_pred cCCCcHHHHHHhcCc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHEEECCCCCEEEeeC
Confidence 999999988865422 3489999999999999999999998 9999999999999999999999997
No 102
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=99.88 E-value=2.7e-22 Score=190.84 Aligned_cols=139 Identities=26% Similarity=0.363 Sum_probs=117.9
Q ss_pred ccCccCCceEEEEEeCCC---CEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEecCCCCC
Q 013004 306 ILGRGGFGKVYKGRLADG---KLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGS 382 (451)
Q Consensus 306 ~lG~G~fg~Vy~~~~~~~---~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~gs 382 (451)
.||+|+||.||+|+..++ ..+++|.++..........|.+|+.++..++||||+++++++......++||||+++|+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 81 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD 81 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence 589999999999975443 34567766544333334579999999999999999999999999999999999999999
Q ss_pred hhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 383 VASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 383 L~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|.+++.+........++.....++.|++.||+|||+. +++||||||+|||++.++.++++||
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nil~~~~~~~~l~Df 143 (268)
T cd05086 82 LKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKH---NFLHSDLALRNCFLTSDLTVKVGDY 143 (268)
T ss_pred HHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CeeccCCccceEEEcCCccEEeccc
Confidence 9999986543333467778889999999999999998 9999999999999999999999998
No 103
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=99.88 E-value=2.2e-22 Score=196.28 Aligned_cols=136 Identities=29% Similarity=0.448 Sum_probs=117.7
Q ss_pred CccCccCCceEEEEEeC-CCCEEEEEEcccccc--cccHHHHHHHHHHHhc-CCCCCccceeeEEecCCeeeEEEecCCC
Q 013004 305 NILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVKIISM-AVHRNLLRLYGFCTTVTEKLLVYPYMTN 380 (451)
Q Consensus 305 ~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~-l~H~niv~l~~~~~~~~~~~lv~ey~~~ 380 (451)
+.||+|+||+||+|+.. +++.||||.++.... ......+..|..++.. .+||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 46899999999999975 578999999865432 2223356677777765 5899999999999999999999999999
Q ss_pred CChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 381 GSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 381 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|+|.+++.... .+++.++..++.|++.||.|||+. +|+||||||+|||++.++.++++||
T Consensus 81 g~L~~~l~~~~----~~~~~~~~~~~~qi~~al~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Df 140 (316)
T cd05619 81 GDLMFHIQSCH----KFDLPRATFYAAEIICGLQFLHSK---GIVYRDLKLDNILLDTDGHIKIADF 140 (316)
T ss_pred CcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEccC
Confidence 99999997643 378999999999999999999998 9999999999999999999999998
No 104
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=99.88 E-value=2.2e-22 Score=190.45 Aligned_cols=143 Identities=27% Similarity=0.428 Sum_probs=127.2
Q ss_pred hcCCCCCCccCccCCceEEEEEeCCCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEec
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 377 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey 377 (451)
.++|+..+.||+|+||.||+|...+++.||+|.+.... .....+.+|+.+++.++|+||+++++++...+..+++|||
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 82 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT--MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEY 82 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCc--hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEec
Confidence 46788889999999999999998888899999886432 2245789999999999999999999999999999999999
Q ss_pred CCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 378 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 378 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+++|+|.+++..... ..+++.++..++.|++.||+|||+. +++||||||+||++++++.++++||
T Consensus 83 ~~~~~L~~~l~~~~~--~~~~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~df 147 (261)
T cd05072 83 MAKGSLLDFLKSDEG--GKVLLPKLIDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSESLMCKIADF 147 (261)
T ss_pred CCCCcHHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEecCCCcEEECCC
Confidence 999999999976432 2478999999999999999999998 9999999999999999999999997
No 105
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=99.88 E-value=2.8e-22 Score=189.39 Aligned_cols=141 Identities=30% Similarity=0.466 Sum_probs=125.3
Q ss_pred cCCCCCCccCccCCceEEEEEeCCCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEecC
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYM 378 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~ 378 (451)
++|+..+.||+|+||.||+|++.++..+|+|.++.... ....|.+|+.++.+++||||+++++++......+++|||+
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 81 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM--SEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYM 81 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCcc--cHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcC
Confidence 35677788999999999999987777899998864322 2346899999999999999999999999888899999999
Q ss_pred CCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 379 TNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 379 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
++|+|.+++..... .++|.++..++.|++.||+|||+. +++||||||+||++++++.+|++||
T Consensus 82 ~~~~l~~~i~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~d~ 144 (256)
T cd05113 82 SNGCLLNYLREHGK---RFQPSQLLEMCKDVCEGMAYLESK---QFIHRDLAARNCLVDDQGCVKVSDF 144 (256)
T ss_pred CCCcHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCCEEECCC
Confidence 99999999976432 489999999999999999999998 9999999999999999999999997
No 106
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.88 E-value=3.2e-23 Score=175.67 Aligned_cols=141 Identities=23% Similarity=0.439 Sum_probs=122.9
Q ss_pred CCCCCCccCccCCceEEEEEe-CCCCEEEEEEcccccccccH-HHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEec
Q 013004 300 GFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGE-LQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 377 (451)
Q Consensus 300 ~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~~~~-~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey 377 (451)
+|+..+.||+|.||+||+|+. .+++.||+|+++.+...++. ....+|+.+++.++|+|||+++++..+.+..-+|+||
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~ 82 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF 82 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence 456668899999999999984 56899999999766544432 3678999999999999999999999999999999999
Q ss_pred CCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 378 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 378 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|.. +|..+.....+ .++......++.|+++||.|.|++ ++.|||+||+|.|++.+|+.|++||
T Consensus 83 cdq-dlkkyfdslng---~~d~~~~rsfmlqllrgl~fchsh---nvlhrdlkpqnllin~ngelkladf 145 (292)
T KOG0662|consen 83 CDQ-DLKKYFDSLNG---DLDPEIVRSFMLQLLRGLGFCHSH---NVLHRDLKPQNLLINRNGELKLADF 145 (292)
T ss_pred hhH-HHHHHHHhcCC---cCCHHHHHHHHHHHHhhhhhhhhh---hhhhccCCcceEEeccCCcEEeccc
Confidence 965 78777765433 478888899999999999999999 9999999999999999999999998
No 107
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=99.88 E-value=2.5e-22 Score=195.94 Aligned_cols=136 Identities=26% Similarity=0.413 Sum_probs=117.5
Q ss_pred CccCccCCceEEEEEeC-CCCEEEEEEcccccc--cccHHHHHHHHHHHhc-CCCCCccceeeEEecCCeeeEEEecCCC
Q 013004 305 NILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVKIISM-AVHRNLLRLYGFCTTVTEKLLVYPYMTN 380 (451)
Q Consensus 305 ~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~-l~H~niv~l~~~~~~~~~~~lv~ey~~~ 380 (451)
+.||+|+||.||+|+.. +++.||+|.++.... ......+..|..++.. .+||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 46999999999999875 588999999865432 2223356677777765 4899999999999999999999999999
Q ss_pred CChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 381 GSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 381 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|+|..++.... .+++.++..++.|++.||+|||+. +|+||||||+|||++.++.++++||
T Consensus 81 g~L~~~i~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nil~~~~~~~kl~Df 140 (316)
T cd05620 81 GDLMFHIQDKG----RFDLYRATFYAAEIVCGLQFLHSK---GIIYRDLKLDNVMLDRDGHIKIADF 140 (316)
T ss_pred CcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEeCcc
Confidence 99999987643 378999999999999999999999 9999999999999999999999998
No 108
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=99.88 E-value=2.1e-22 Score=197.02 Aligned_cols=141 Identities=25% Similarity=0.354 Sum_probs=121.2
Q ss_pred CCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccc--cccHHHHHHHHHHHhcC-CCCCccceeeEEecCCeeeEEE
Q 013004 300 GFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVKIISMA-VHRNLLRLYGFCTTVTEKLLVY 375 (451)
Q Consensus 300 ~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~ 375 (451)
+|...+.||+|+||+||+|+.. +++.||||.++.... ......+..|..++... +|++|+++++++.+.+..++||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 4777889999999999999865 578999999865432 12223467777777766 5899999999999999999999
Q ss_pred ecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 376 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 376 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
||+++|+|.+.+.... .+++.++..++.|++.||+|||+. +|+||||||+|||+++++.+|++||
T Consensus 81 E~~~~g~L~~~~~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kL~Df 145 (323)
T cd05616 81 EYVNGGDLMYQIQQVG----RFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADF 145 (323)
T ss_pred cCCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CEEecCCCHHHeEECCCCcEEEccC
Confidence 9999999999887643 388999999999999999999998 9999999999999999999999997
No 109
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=99.88 E-value=2.3e-22 Score=196.81 Aligned_cols=136 Identities=29% Similarity=0.417 Sum_probs=116.3
Q ss_pred CccCccCCceEEEEEeC-CCCEEEEEEcccccc--cccHHHHHHHHH-HHhcCCCCCccceeeEEecCCeeeEEEecCCC
Q 013004 305 NILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVK-IISMAVHRNLLRLYGFCTTVTEKLLVYPYMTN 380 (451)
Q Consensus 305 ~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~~E~~-~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~ 380 (451)
+.||+|+||+||+|+.. +++.||+|.+..... ......+.+|.. +++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 46899999999999874 689999999864321 112234555544 56789999999999999999999999999999
Q ss_pred CChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 381 GSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 381 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|+|..++.... .+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+|++||
T Consensus 81 g~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---givH~dikp~NIll~~~~~~kl~Df 140 (323)
T cd05575 81 GELFFHLQRER----SFPEPRARFYAAEIASALGYLHSL---NIIYRDLKPENILLDSQGHVVLTDF 140 (323)
T ss_pred CCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEecc
Confidence 99999987643 378899999999999999999999 9999999999999999999999998
No 110
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=99.88 E-value=2.3e-22 Score=194.99 Aligned_cols=147 Identities=29% Similarity=0.479 Sum_probs=125.3
Q ss_pred hcCCCCCCccCccCCceEEEEEeC-CCC--EEEEEEcccccccccHHHHHHHHHHHhcC-CCCCccceeeEEecCCeeeE
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLA-DGK--LVAVKRLKEERTSGGELQFQTEVKIISMA-VHRNLLRLYGFCTTVTEKLL 373 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~-~~~--~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~l 373 (451)
.++|+..+.||+|+||.||+|+.+ ++. .+|+|.++..........+.+|++++.++ +|+||+++++++...+..++
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~l 85 (303)
T cd05088 6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 85 (303)
T ss_pred hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceE
Confidence 356788899999999999999864 444 46888776543333445788999999999 89999999999999999999
Q ss_pred EEecCCCCChhHHhhccCC------------CCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCC
Q 013004 374 VYPYMTNGSVASRLRERQS------------SLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441 (451)
Q Consensus 374 v~ey~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~ 441 (451)
++||+++|+|.++++.... ....+++.++..++.|++.|++|||+. +|+||||||+|||+++++.
T Consensus 86 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dlkp~Nili~~~~~ 162 (303)
T cd05088 86 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYV 162 (303)
T ss_pred EEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEecCCCc
Confidence 9999999999999976431 123578999999999999999999998 9999999999999999999
Q ss_pred ccchhh
Q 013004 442 QSSKTI 447 (451)
Q Consensus 442 ~~i~df 447 (451)
++++||
T Consensus 163 ~kl~df 168 (303)
T cd05088 163 AKIADF 168 (303)
T ss_pred EEeCcc
Confidence 999997
No 111
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=99.88 E-value=2.7e-22 Score=189.91 Aligned_cols=144 Identities=29% Similarity=0.416 Sum_probs=128.3
Q ss_pred HhcCCCCCCccCccCCceEEEEEeCCCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEe
Q 013004 297 ATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 376 (451)
Q Consensus 297 ~~~~f~~~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 376 (451)
..++|+..+.||+|+||.||+|...+++.||+|.++... ....++.+|+.+++.++|+||+++++++...+..+++||
T Consensus 4 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (261)
T cd05068 4 DRTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT--MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTE 81 (261)
T ss_pred chhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc--ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeee
Confidence 345688889999999999999998778899999986532 234568999999999999999999999999999999999
Q ss_pred cCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 377 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 377 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|+++++|.+++.... ...++|.....++.|++.|+.|||+. +|+||||||+||++++++.++++||
T Consensus 82 ~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~df 147 (261)
T cd05068 82 LMKYGSLLEYLQGGA--GRALKLPQLIDMAAQVASGMAYLEAQ---NYIHRDLAARNVLVGENNICKVADF 147 (261)
T ss_pred cccCCcHHHHHhccC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCcceEEEcCCCCEEECCc
Confidence 999999999997653 23489999999999999999999998 9999999999999999999999998
No 112
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=99.88 E-value=2.8e-22 Score=194.82 Aligned_cols=143 Identities=28% Similarity=0.349 Sum_probs=125.4
Q ss_pred cCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEec
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 377 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey 377 (451)
++|+..+.||+|+||.||+++.. ++..+|+|.++.........++.+|++++..++||||+++++++...+..++++||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey 80 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH 80 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence 46888899999999999999864 57889999886543333334688999999999999999999999999999999999
Q ss_pred CCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 378 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 378 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+++++|.+++.... .+++.....++.|+++||.|||+.+ +++||||||+||++++++.++++||
T Consensus 81 ~~~~~L~~~l~~~~----~~~~~~~~~~~~~i~~~l~~lH~~~--~i~H~dl~p~nil~~~~~~~~l~df 144 (308)
T cd06615 81 MDGGSLDQVLKKAG----RIPENILGKISIAVLRGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDF 144 (308)
T ss_pred cCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhhC--CEEECCCChHHEEEecCCcEEEccC
Confidence 99999999997653 3789999999999999999999731 7999999999999999999999997
No 113
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=99.88 E-value=1.6e-22 Score=194.20 Aligned_cols=142 Identities=18% Similarity=0.302 Sum_probs=122.3
Q ss_pred cCCCCCCccCccCCceEEEEEeC-CCCEEEEEEccccccc-ccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEe
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS-GGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 376 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 376 (451)
++|+..+.||+|+||.||+|+.+ +++.||||+++..... .....+.+|+.++..++||||+++++++...+..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE 80 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence 36788899999999999999975 5789999998654322 223468899999999999999999999999999999999
Q ss_pred cCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 377 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 377 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|++++.+....... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+|++||
T Consensus 81 ~~~~~~l~~~~~~~----~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nill~~~~~~kl~Df 144 (287)
T cd07848 81 YVEKNMLELLEEMP----NGVPPEKVRSYIYQLIKAIHWCHKN---DIVHRDIKPENLLISHNDVLKLCDF 144 (287)
T ss_pred cCCCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeec
Confidence 99987776544322 2378999999999999999999998 9999999999999999999999997
No 114
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=99.88 E-value=4.3e-22 Score=187.10 Aligned_cols=137 Identities=34% Similarity=0.540 Sum_probs=122.4
Q ss_pred CccCccCCceEEEEEeCCCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEecCCCCChh
Q 013004 305 NILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVA 384 (451)
Q Consensus 305 ~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~gsL~ 384 (451)
++||+|+||.||+|...+++.+|+|.++..........+.+|+.+++.++||||+++++++...+..++||||+++|+|.
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 80 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL 80 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence 36899999999999988889999999865443333446889999999999999999999999999999999999999999
Q ss_pred HHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 385 SRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 385 ~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+++..... .+++.....++.|++.||.|+|+. +++||||||+||++++++.++++||
T Consensus 81 ~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~ 137 (250)
T cd05085 81 SFLRKKKD---ELKTKQLVKFALDAAAGMAYLESK---NCIHRDLAARNCLVGENNVLKISDF 137 (250)
T ss_pred HHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeecccChheEEEcCCCeEEECCC
Confidence 99875432 478999999999999999999998 9999999999999999999999998
No 115
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=99.88 E-value=2.4e-22 Score=193.96 Aligned_cols=146 Identities=28% Similarity=0.437 Sum_probs=125.1
Q ss_pred cCCCCCCccCccCCceEEEEEeCC---------------CCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceee
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLAD---------------GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYG 363 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~~---------------~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~ 363 (451)
++|...+.||+|+||.||+|+..+ ...||+|.++..........|.+|++++..++|+|++++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~ 84 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG 84 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence 467888999999999999987532 23589999876543333457899999999999999999999
Q ss_pred EEecCCeeeEEEecCCCCChhHHhhccCC--------CCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCcee
Q 013004 364 FCTTVTEKLLVYPYMTNGSVASRLRERQS--------SLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANIL 435 (451)
Q Consensus 364 ~~~~~~~~~lv~ey~~~gsL~~~l~~~~~--------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NIL 435 (451)
++......++||||+++++|.+++..... ....++|.+...++.|++.||+|||+. +++||||||+||+
T Consensus 85 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Nil 161 (295)
T cd05097 85 VCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASL---NFVHRDLATRNCL 161 (295)
T ss_pred EEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhc---CeeccccChhhEE
Confidence 99999999999999999999999865321 112478999999999999999999998 9999999999999
Q ss_pred eCCCCCccchhh
Q 013004 436 LDEDADQSSKTI 447 (451)
Q Consensus 436 ld~~~~~~i~df 447 (451)
+++++.+|++||
T Consensus 162 l~~~~~~kl~df 173 (295)
T cd05097 162 VGNHYTIKIADF 173 (295)
T ss_pred EcCCCcEEeccc
Confidence 999999999997
No 116
>PHA02988 hypothetical protein; Provisional
Probab=99.88 E-value=4.4e-22 Score=191.16 Aligned_cols=137 Identities=19% Similarity=0.307 Sum_probs=118.8
Q ss_pred CCccCccCCceEEEEEeCCCCEEEEEEccccccccc--HHHHHHHHHHHhcCCCCCccceeeEEec----CCeeeEEEec
Q 013004 304 KNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGG--ELQFQTEVKIISMAVHRNLLRLYGFCTT----VTEKLLVYPY 377 (451)
Q Consensus 304 ~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~~~----~~~~~lv~ey 377 (451)
...||+|++|.||+|.+ +|+.||||+++....... ...|.+|+.++.+++|||||++++++.+ ....++||||
T Consensus 25 ~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey 103 (283)
T PHA02988 25 SVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEY 103 (283)
T ss_pred CeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEe
Confidence 36799999999999998 688999999975432221 2468899999999999999999999876 3468999999
Q ss_pred CCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 378 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 378 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+++|+|.+++.+.. .++|.....++.+++.|+.|||+.. +++||||||+|||+++++.+|++||
T Consensus 104 ~~~g~L~~~l~~~~----~~~~~~~~~i~~~i~~~l~~lH~~~--~~~Hrdlkp~nill~~~~~~kl~df 167 (283)
T PHA02988 104 CTRGYLREVLDKEK----DLSFKTKLDMAIDCCKGLYNLYKYT--NKPYKNLTSVSFLVTENYKLKIICH 167 (283)
T ss_pred CCCCcHHHHHhhCC----CCChhHHHHHHHHHHHHHHHHHhcC--CCCCCcCChhhEEECCCCcEEEccc
Confidence 99999999997653 3889999999999999999999732 6789999999999999999999997
No 117
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=99.88 E-value=2.5e-22 Score=191.98 Aligned_cols=146 Identities=31% Similarity=0.524 Sum_probs=127.1
Q ss_pred cCCCCCCccCccCCceEEEEEeCC------CCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeee
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLAD------GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKL 372 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~~------~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 372 (451)
++|...+.||+|+||.||+|...+ ++.||||.++..........+.+|++++..++|+||+++++++......+
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 84 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPI 84 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeE
Confidence 457778899999999999998632 47899999875443334457999999999999999999999999999999
Q ss_pred EEEecCCCCChhHHhhccCC----------CCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCc
Q 013004 373 LVYPYMTNGSVASRLRERQS----------SLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQ 442 (451)
Q Consensus 373 lv~ey~~~gsL~~~l~~~~~----------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~ 442 (451)
++|||+++|+|.+++..... ....+++.+...++.|++.|+.|||+. +++||||||+||+++.++.+
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~ 161 (280)
T cd05049 85 MVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ---HFVHRDLATRNCLVGYDLVV 161 (280)
T ss_pred EEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeeccccccceEEEcCCCeE
Confidence 99999999999999976421 223478999999999999999999998 99999999999999999999
Q ss_pred cchhh
Q 013004 443 SSKTI 447 (451)
Q Consensus 443 ~i~df 447 (451)
+++||
T Consensus 162 kl~d~ 166 (280)
T cd05049 162 KIGDF 166 (280)
T ss_pred EECCc
Confidence 99998
No 118
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=99.88 E-value=2.7e-22 Score=196.44 Aligned_cols=136 Identities=27% Similarity=0.392 Sum_probs=116.5
Q ss_pred CccCccCCceEEEEEe-CCCCEEEEEEcccccc--cccHHHHHHHHH-HHhcCCCCCccceeeEEecCCeeeEEEecCCC
Q 013004 305 NILGRGGFGKVYKGRL-ADGKLVAVKRLKEERT--SGGELQFQTEVK-IISMAVHRNLLRLYGFCTTVTEKLLVYPYMTN 380 (451)
Q Consensus 305 ~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~--~~~~~~~~~E~~-~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~ 380 (451)
+.||+|+||+||+|+. .+|+.||+|++..... ......+..|.. +++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 4689999999999986 4689999999865322 112234555554 56789999999999999999999999999999
Q ss_pred CChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 381 GSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 381 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|+|..++.... .+++.++..++.|++.||+|||+. +|+||||||+|||+++++.++++||
T Consensus 81 ~~L~~~l~~~~----~~~~~~~~~~~~qi~~al~~lH~~---givH~Dlkp~NIll~~~~~~kL~Df 140 (325)
T cd05604 81 GELFFHLQRER----SFPEPRARFYAAEIASALGYLHSI---NIVYRDLKPENILLDSQGHVVLTDF 140 (325)
T ss_pred CCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEeec
Confidence 99998887543 388999999999999999999998 9999999999999999999999998
No 119
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=99.88 E-value=2e-22 Score=197.27 Aligned_cols=141 Identities=25% Similarity=0.350 Sum_probs=121.4
Q ss_pred CCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccc--cccHHHHHHHHHHHhcCC-CCCccceeeEEecCCeeeEEE
Q 013004 300 GFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVKIISMAV-HRNLLRLYGFCTTVTEKLLVY 375 (451)
Q Consensus 300 ~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lv~ 375 (451)
+|...+.||+|+||+||+|+.. +++.||+|.++.... ......+..|..++..+. |++|+++++++.+.+..++||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 3667789999999999999864 688999999865432 222345778888888776 577888999999999999999
Q ss_pred ecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 376 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 376 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
||+++|+|.+++.... .+++.++..++.|++.||.|||+. +|+||||||+|||+++++.++++||
T Consensus 81 Ey~~~g~L~~~i~~~~----~l~~~~~~~i~~qi~~al~~lH~~---~ivHrDikp~Nill~~~~~ikL~Df 145 (323)
T cd05615 81 EYVNGGDLMYHIQQVG----KFKEPQAVFYAAEISVGLFFLHRR---GIIYRDLKLDNVMLDSEGHIKIADF 145 (323)
T ss_pred cCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEecc
Confidence 9999999999987643 389999999999999999999998 9999999999999999999999998
No 120
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=99.88 E-value=2.4e-22 Score=198.39 Aligned_cols=147 Identities=30% Similarity=0.425 Sum_probs=123.2
Q ss_pred hcCCCCCCccCccCCceEEEEEe------CCCCEEEEEEcccccccccHHHHHHHHHHHhcC-CCCCccceeeEEecC-C
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRL------ADGKLVAVKRLKEERTSGGELQFQTEVKIISMA-VHRNLLRLYGFCTTV-T 369 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~------~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~-~ 369 (451)
.++|...+.||+|+||.||+|.+ .+++.||||.++..........+.+|+.++..+ +|+||+++++++... .
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 85 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 85 (343)
T ss_pred hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCC
Confidence 45788899999999999999974 246789999997543333344688999999999 689999999988654 4
Q ss_pred eeeEEEecCCCCChhHHhhccCCC--------------------------------------------------------
Q 013004 370 EKLLVYPYMTNGSVASRLRERQSS-------------------------------------------------------- 393 (451)
Q Consensus 370 ~~~lv~ey~~~gsL~~~l~~~~~~-------------------------------------------------------- 393 (451)
..+++|||+++|+|.++++.....
T Consensus 86 ~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (343)
T cd05103 86 PLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEE 165 (343)
T ss_pred ceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhh
Confidence 678999999999999998753210
Q ss_pred -------CCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 394 -------LPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 394 -------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
...++|.+...++.|+++||+|||+. +|+||||||+|||+++++.++++||
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~~~~~kl~df 223 (343)
T cd05103 166 AEQEDLYKKVLTLEDLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSENNVVKICDF 223 (343)
T ss_pred hhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCccCeEEEcCCCcEEEEec
Confidence 12368888999999999999999998 9999999999999999999999998
No 121
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=99.88 E-value=4.6e-22 Score=189.29 Aligned_cols=140 Identities=31% Similarity=0.407 Sum_probs=119.9
Q ss_pred CccCccCCceEEEEEeCC---CCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEecCCCC
Q 013004 305 NILGRGGFGKVYKGRLAD---GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNG 381 (451)
Q Consensus 305 ~~lG~G~fg~Vy~~~~~~---~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~g 381 (451)
+.||+|+||.||+|...+ +..+|+|.++..........+.+|+.+++.++||||+++++++.+....++||||+++|
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG 80 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence 358999999999998643 45799998865543333447889999999999999999999999999999999999999
Q ss_pred ChhHHhhccCC-CCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 382 SVASRLRERQS-SLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 382 sL~~~l~~~~~-~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+|.+++..... .....++..+..++.|++.|++|||+. +++||||||+||+++.++.++++||
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dlkp~nil~~~~~~~kL~df 144 (269)
T cd05087 81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKN---NFIHSDLALRNCLLTADLTVKIGDY 144 (269)
T ss_pred cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEECCc
Confidence 99999975432 123467788889999999999999998 9999999999999999999999997
No 122
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=99.88 E-value=2e-22 Score=198.13 Aligned_cols=140 Identities=19% Similarity=0.370 Sum_probs=119.6
Q ss_pred CCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccc-cccHHHHHHHHHHHhcCCCCCccceeeEEecC-----Ceee
Q 013004 300 GFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT-SGGELQFQTEVKIISMAVHRNLLRLYGFCTTV-----TEKL 372 (451)
Q Consensus 300 ~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-----~~~~ 372 (451)
+|+..+.||+|+||.||+|+.. +++.||||+++.... ......+.+|+.+++.++||||+++++++... ...+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 3667789999999999999864 689999999864322 22234688999999999999999999987543 2479
Q ss_pred EEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 373 LVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 373 lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+||||+. ++|.+++.... .+++..+..++.|+++||.|||+. +|+||||||+|||++.++.+|++||
T Consensus 81 lv~e~~~-~~L~~~l~~~~----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kL~Df 147 (338)
T cd07859 81 VVFELME-SDLHQVIKAND----DLTPEHHQFFLYQLLRALKYIHTA---NVFHRDLKPKNILANADCKLKICDF 147 (338)
T ss_pred EEEecCC-CCHHHHHHhcc----cCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEccC
Confidence 9999995 68998887543 389999999999999999999999 9999999999999999999999998
No 123
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=99.88 E-value=4.2e-22 Score=188.11 Aligned_cols=140 Identities=31% Similarity=0.450 Sum_probs=124.9
Q ss_pred CCCCCCccCccCCceEEEEEeCCCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEecCC
Q 013004 300 GFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMT 379 (451)
Q Consensus 300 ~f~~~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~ 379 (451)
+|+..+.||+|+||.||+|+++++..+|+|.+.... .....|.+|+.+++.++|+||+++++++...+..++|+||++
T Consensus 5 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 82 (256)
T cd05059 5 ELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGA--MSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMA 82 (256)
T ss_pred HcchhhhhccCCCceEEEeEecCCccEEEEEeccCC--CCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCC
Confidence 467788999999999999998777789999885432 223468899999999999999999999999999999999999
Q ss_pred CCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 380 NGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 380 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+++|.+++..... .++|.....++.|++.|++|||+. +|+||||||+||++++++.++++||
T Consensus 83 ~~~L~~~l~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~df 144 (256)
T cd05059 83 NGCLLNYLRERKG---KLGTEWLLDMCSDVCEAMEYLESN---GFIHRDLAARNCLVGEDNVVKVSDF 144 (256)
T ss_pred CCCHHHHHHhccc---CCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHhhEEECCCCcEEECCc
Confidence 9999999976432 489999999999999999999998 9999999999999999999999997
No 124
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=99.88 E-value=2.4e-22 Score=193.54 Aligned_cols=149 Identities=30% Similarity=0.466 Sum_probs=127.6
Q ss_pred HHhcCCCCCCccCccCCceEEEEEeCC------CCEEEEEEcccccccccHHHHHHHHHHHhcC-CCCCccceeeEEecC
Q 013004 296 VATDGFSNKNILGRGGFGKVYKGRLAD------GKLVAVKRLKEERTSGGELQFQTEVKIISMA-VHRNLLRLYGFCTTV 368 (451)
Q Consensus 296 ~~~~~f~~~~~lG~G~fg~Vy~~~~~~------~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~ 368 (451)
...++|+..+.||+|+||.||++.... ...+|+|.++..........+.+|+.++.++ +|+||+++++++...
T Consensus 9 ~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 88 (293)
T cd05053 9 LPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQE 88 (293)
T ss_pred cCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCC
Confidence 345668888999999999999998632 3679999987543333344688999999999 799999999999999
Q ss_pred CeeeEEEecCCCCChhHHhhccC------------CCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceee
Q 013004 369 TEKLLVYPYMTNGSVASRLRERQ------------SSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILL 436 (451)
Q Consensus 369 ~~~~lv~ey~~~gsL~~~l~~~~------------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILl 436 (451)
+..+++|||+++|+|.+++.... .....+++..+..++.|++.||.|||+. +|+||||||+||++
T Consensus 89 ~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~Nil~ 165 (293)
T cd05053 89 GPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK---KCIHRDLAARNVLV 165 (293)
T ss_pred CCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CccccccceeeEEE
Confidence 99999999999999999997532 1234589999999999999999999998 99999999999999
Q ss_pred CCCCCccchhh
Q 013004 437 DEDADQSSKTI 447 (451)
Q Consensus 437 d~~~~~~i~df 447 (451)
++++.++++||
T Consensus 166 ~~~~~~kL~Df 176 (293)
T cd05053 166 TEDHVMKIADF 176 (293)
T ss_pred cCCCeEEeCcc
Confidence 99999999998
No 125
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=99.88 E-value=3.2e-22 Score=196.19 Aligned_cols=136 Identities=28% Similarity=0.375 Sum_probs=119.1
Q ss_pred CccCccCCceEEEEEeC-CCCEEEEEEccccccc--ccHHHHHHHHHHHhcC-CCCCccceeeEEecCCeeeEEEecCCC
Q 013004 305 NILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS--GGELQFQTEVKIISMA-VHRNLLRLYGFCTTVTEKLLVYPYMTN 380 (451)
Q Consensus 305 ~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~--~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~ey~~~ 380 (451)
+.||+|+||+||+|+.. +++.||+|+++..... .....+.+|+.++..+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999864 5789999999754322 2233578899988877 599999999999999999999999999
Q ss_pred CChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 381 GSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 381 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|+|..++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.++|+||
T Consensus 81 ~~L~~~~~~~~----~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nili~~~~~~kl~Df 140 (327)
T cd05617 81 GDLMFHMQRQR----KLPEEHARFYAAEICIALNFLHER---GIIYRDLKLDNVLLDADGHIKLTDY 140 (327)
T ss_pred CcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEeCCCCEEEecc
Confidence 99998886543 389999999999999999999999 9999999999999999999999998
No 126
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=99.88 E-value=4.8e-22 Score=190.77 Aligned_cols=141 Identities=27% Similarity=0.460 Sum_probs=122.8
Q ss_pred CCCCCccCccCCceEEEEEe-----CCCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecC--CeeeE
Q 013004 301 FSNKNILGRGGFGKVYKGRL-----ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTV--TEKLL 373 (451)
Q Consensus 301 f~~~~~lG~G~fg~Vy~~~~-----~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~l 373 (451)
|+..+.||+|+||.||++++ .+++.||+|.++..........+.+|+.+++.++||||+++++++... ...++
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (284)
T cd05079 6 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKL 85 (284)
T ss_pred hhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceEE
Confidence 57788999999999999974 247889999987543333345789999999999999999999998775 56899
Q ss_pred EEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 374 VYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 374 v~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
||||+++++|.+++.... ..++|.++..++.|++.||+|||+. +++||||||+||+++.++.++++||
T Consensus 86 v~e~~~g~~L~~~l~~~~---~~~~~~~~~~i~~~i~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~~~l~df 153 (284)
T cd05079 86 IMEFLPSGSLKEYLPRNK---NKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDF 153 (284)
T ss_pred EEEccCCCCHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccchheEEEcCCCCEEECCC
Confidence 999999999999986543 2479999999999999999999998 9999999999999999999999997
No 127
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=99.88 E-value=4.7e-22 Score=194.77 Aligned_cols=136 Identities=28% Similarity=0.381 Sum_probs=115.0
Q ss_pred CccCccCCceEEEEEeC-CCCEEEEEEcccccc--cccHHHHHHHH-HHHhcCCCCCccceeeEEecCCeeeEEEecCCC
Q 013004 305 NILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEV-KIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTN 380 (451)
Q Consensus 305 ~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~~E~-~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~ 380 (451)
+.||+|+||+||+|+.. +++.||+|++..... ......+..|. .+++.++|+||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 46999999999999865 578899999864321 11222344444 456788999999999999999999999999999
Q ss_pred CChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 381 GSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 381 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|+|.+++.... .+.+.....++.|+++||.|||+. +|+||||||+|||++.++.++++||
T Consensus 81 ~~L~~~~~~~~----~~~~~~~~~~~~qi~~~L~~lH~~---giiHrDlkp~Nili~~~~~~kl~Df 140 (325)
T cd05602 81 GELFYHLQRER----CFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDF 140 (325)
T ss_pred CcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEEccC
Confidence 99999997643 367888889999999999999999 9999999999999999999999998
No 128
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=99.88 E-value=5.7e-22 Score=189.89 Aligned_cols=146 Identities=31% Similarity=0.506 Sum_probs=125.6
Q ss_pred cCCCCCCccCccCCceEEEEEeCC------CCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeee
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLAD------GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKL 372 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~~------~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 372 (451)
++|+..+.||+|+||.||+|.... ...||+|.++.........+|.+|+..+..++||||+++++++......+
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTC 84 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceE
Confidence 467888999999999999998633 25799999865443333456899999999999999999999999888999
Q ss_pred EEEecCCCCChhHHhhccCCC------------CCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCC
Q 013004 373 LVYPYMTNGSVASRLRERQSS------------LPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDA 440 (451)
Q Consensus 373 lv~ey~~~gsL~~~l~~~~~~------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~ 440 (451)
++|||+++|+|.+++...... ...+++.+...++.|++.||.|||+. +++||||||+||++++++
T Consensus 85 ~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nil~~~~~ 161 (283)
T cd05048 85 MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH---HFVHRDLAARNCLVGEGL 161 (283)
T ss_pred EEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccccceEEEcCCC
Confidence 999999999999999764210 13478899999999999999999999 999999999999999999
Q ss_pred Cccchhh
Q 013004 441 DQSSKTI 447 (451)
Q Consensus 441 ~~~i~df 447 (451)
.++++||
T Consensus 162 ~~~L~df 168 (283)
T cd05048 162 TVKISDF 168 (283)
T ss_pred cEEECCC
Confidence 9999997
No 129
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=99.88 E-value=5.2e-22 Score=188.45 Aligned_cols=146 Identities=18% Similarity=0.289 Sum_probs=126.1
Q ss_pred cCCCCCCccCccCCceEEEEEe-CCCCEEEEEEcccccc--cccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEE
Q 013004 299 DGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERT--SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 375 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (451)
++|+..+.||+|+||.||+|+. .+++.||||.++.... ......+.+|+++++.++||||+++++++...+..++++
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 4688889999999999999986 4689999998754322 222346889999999999999999999999999999999
Q ss_pred ecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 376 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 376 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
||+++|+|.+++.........+++.....++.|++.||.|||+. +++||||||+||+++.++.++++||
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~nil~~~~~~~~l~d~ 150 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSR---RVMHRDIKPANVFITATGVVKLGDL 150 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCCHHHEEEcCCCCEEECcc
Confidence 99999999988865333233478889999999999999999998 9999999999999999999999997
No 130
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=99.88 E-value=4.8e-22 Score=194.13 Aligned_cols=136 Identities=30% Similarity=0.439 Sum_probs=119.0
Q ss_pred CccCccCCceEEEEEeC-CCCEEEEEEcccccc--cccHHHHHHHHHHHhcC-CCCCccceeeEEecCCeeeEEEecCCC
Q 013004 305 NILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVKIISMA-VHRNLLRLYGFCTTVTEKLLVYPYMTN 380 (451)
Q Consensus 305 ~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~ey~~~ 380 (451)
+.||+|+||+||+|+.. +++.||||.++.... ......+.+|.+++..+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999875 578999999975432 22234577888888877 699999999999999999999999999
Q ss_pred CChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 381 GSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 381 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|+|..++.... .+++..+..++.|++.||.|||+. +|+||||||+||++++++.++++||
T Consensus 81 ~~L~~~~~~~~----~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kl~Df 140 (318)
T cd05570 81 GDLMFHIQRSG----RFDEPRARFYAAEIVLGLQFLHER---GIIYRDLKLDNVLLDSEGHIKIADF 140 (318)
T ss_pred CCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeEccCCCHHHeEECCCCcEEeccc
Confidence 99998887653 389999999999999999999998 9999999999999999999999998
No 131
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=99.88 E-value=2.9e-22 Score=189.51 Aligned_cols=145 Identities=30% Similarity=0.456 Sum_probs=128.8
Q ss_pred HhcCCCCCCccCccCCceEEEEEeCCCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEe
Q 013004 297 ATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 376 (451)
Q Consensus 297 ~~~~f~~~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 376 (451)
...+|+..+.||+|+||.||+|...+++.+|+|.++.... .....+.+|+.++..++|+||+++++++...+..+++||
T Consensus 4 ~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 82 (261)
T cd05148 4 PREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDL-LKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITE 82 (261)
T ss_pred cHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccch-hhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEe
Confidence 3456788899999999999999988889999999865432 123468899999999999999999999999999999999
Q ss_pred cCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 377 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 377 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|+++|+|.+++..... ..+++.+...++.|++.|+.|||+. +|+||||||+||++++++.++++||
T Consensus 83 ~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~~i~~al~~lH~~---~i~h~dl~~~nilv~~~~~~kl~d~ 148 (261)
T cd05148 83 LMEKGSLLAFLRSPEG--QVLPVASLIDMACQVAEGMAYLEEQ---NSIHRDLAARNILVGEDLVCKVADF 148 (261)
T ss_pred ecccCCHHHHHhcCCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccCcceEEEcCCceEEEccc
Confidence 9999999999986432 3489999999999999999999998 9999999999999999999999987
No 132
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.88 E-value=2.9e-23 Score=217.03 Aligned_cols=150 Identities=24% Similarity=0.312 Sum_probs=134.6
Q ss_pred HHHHHHHhcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccc--cccHHHHHHHHHHHhcCCCCCccceeeEEec
Q 013004 291 LRELQVATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVKIISMAVHRNLLRLYGFCTT 367 (451)
Q Consensus 291 ~~~~~~~~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~ 367 (451)
+.+++...+||...++||+|+||.|..++.+ +++.||+|++.+... ......|..|..+|...+.++||+++..|++
T Consensus 67 v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD 146 (1317)
T KOG0612|consen 67 VKELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQD 146 (1317)
T ss_pred HHHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcC
Confidence 4566777899999999999999999999874 688999999976432 2334469999999999999999999999999
Q ss_pred CCeeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 368 VTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 368 ~~~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
.+++|+|||||+||||...+.+.. ++++..+..++..|..||.-+|+. |.||||+||+|||+|..|.+|++||
T Consensus 147 ~~~LYlVMdY~pGGDlltLlSk~~----~~pE~~ArFY~aEiVlAldslH~m---gyVHRDiKPDNvLld~~GHikLADF 219 (1317)
T KOG0612|consen 147 ERYLYLVMDYMPGGDLLTLLSKFD----RLPEDWARFYTAEIVLALDSLHSM---GYVHRDIKPDNVLLDKSGHIKLADF 219 (1317)
T ss_pred ccceEEEEecccCchHHHHHhhcC----CChHHHHHHHHHHHHHHHHHHHhc---cceeccCCcceeEecccCcEeeccc
Confidence 999999999999999999998764 388889999999999999999999 9999999999999999999999999
No 133
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=99.87 E-value=5e-22 Score=191.82 Aligned_cols=146 Identities=27% Similarity=0.425 Sum_probs=125.0
Q ss_pred cCCCCCCccCccCCceEEEEEeC-----------------CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccce
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA-----------------DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRL 361 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~-----------------~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l 361 (451)
++|+..+.||+|+||.||+++.. ++..||+|.++.........+|.+|+.++..++|+||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~ 84 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL 84 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence 46888899999999999998532 2346899998754333334578999999999999999999
Q ss_pred eeEEecCCeeeEEEecCCCCChhHHhhccCCC-------CCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCce
Q 013004 362 YGFCTTVTEKLLVYPYMTNGSVASRLRERQSS-------LPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANI 434 (451)
Q Consensus 362 ~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~-------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NI 434 (451)
++++...+..+++|||+++|+|.+++...... ...+++.+...++.|++.|++|||+. +++||||||+||
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dlkp~Ni 161 (296)
T cd05095 85 LAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSL---NFVHRDLATRNC 161 (296)
T ss_pred EEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CeecccCChheE
Confidence 99999999999999999999999998764321 12477889999999999999999998 999999999999
Q ss_pred eeCCCCCccchhh
Q 013004 435 LLDEDADQSSKTI 447 (451)
Q Consensus 435 Lld~~~~~~i~df 447 (451)
++++++.++++||
T Consensus 162 li~~~~~~~l~df 174 (296)
T cd05095 162 LVGKNYTIKIADF 174 (296)
T ss_pred EEcCCCCEEeccC
Confidence 9999999999997
No 134
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.87 E-value=4.9e-22 Score=192.68 Aligned_cols=148 Identities=28% Similarity=0.450 Sum_probs=126.3
Q ss_pred HhcCCCCCCccCccCCceEEEEEeC--------CCCEEEEEEcccccccccHHHHHHHHHHHhcC-CCCCccceeeEEec
Q 013004 297 ATDGFSNKNILGRGGFGKVYKGRLA--------DGKLVAVKRLKEERTSGGELQFQTEVKIISMA-VHRNLLRLYGFCTT 367 (451)
Q Consensus 297 ~~~~f~~~~~lG~G~fg~Vy~~~~~--------~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~ 367 (451)
..++|+..+.||+|+||.||+|+.. ++..||+|.++..........+.+|+.++..+ +||||+++++++..
T Consensus 13 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~ 92 (304)
T cd05101 13 SRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 92 (304)
T ss_pred cHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEec
Confidence 4566788899999999999999741 24579999986543333345788999999999 79999999999999
Q ss_pred CCeeeEEEecCCCCChhHHhhccCCC------------CCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCcee
Q 013004 368 VTEKLLVYPYMTNGSVASRLRERQSS------------LPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANIL 435 (451)
Q Consensus 368 ~~~~~lv~ey~~~gsL~~~l~~~~~~------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NIL 435 (451)
....+++|||+++|+|.+++...... ...++|.++..++.|++.||.|||+. +|+||||||+||+
T Consensus 93 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~Nil 169 (304)
T cd05101 93 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ---KCIHRDLAARNVL 169 (304)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHC---CeeecccccceEE
Confidence 99999999999999999999764221 13478899999999999999999998 9999999999999
Q ss_pred eCCCCCccchhh
Q 013004 436 LDEDADQSSKTI 447 (451)
Q Consensus 436 ld~~~~~~i~df 447 (451)
+++++.++++||
T Consensus 170 i~~~~~~kl~D~ 181 (304)
T cd05101 170 VTENNVMKIADF 181 (304)
T ss_pred EcCCCcEEECCC
Confidence 999999999997
No 135
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.87 E-value=2.5e-22 Score=199.17 Aligned_cols=143 Identities=25% Similarity=0.381 Sum_probs=126.9
Q ss_pred hcCCCCCCccCccCCceEEEEEe-CCCCEEEEEEccccccccc-HHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEE
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGG-ELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 375 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~~~-~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (451)
...|.....||+|.|++|..|+. .++..||||.+.+..-... ...+.+|+++|..++|||||+++.+......+|+||
T Consensus 55 vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV~ 134 (596)
T KOG0586|consen 55 VGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLVM 134 (596)
T ss_pred ccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEEE
Confidence 45577789999999999999986 4689999999976543322 235889999999999999999999999999999999
Q ss_pred ecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 376 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 376 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
||+.+|.+++++..... .....+..+..|+..|++|+|++ .|||||||++|||+|.+.++||+||
T Consensus 135 eya~~ge~~~yl~~~gr----~~e~~ar~~F~q~vsaveYcH~k---~ivHrdLk~eNilL~~~mnikIaDf 199 (596)
T KOG0586|consen 135 EYASGGELFDYLVKHGR----MKEKEARAKFRQIVSAVEYCHSK---NIVHRDLKAENILLDENMNIKIADF 199 (596)
T ss_pred EeccCchhHHHHHhccc----chhhhhhhhhHHHHHHHHHHhhc---ceeccccchhhcccccccceeeecc
Confidence 99999999999988643 55578888999999999999999 9999999999999999999999998
No 136
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=99.87 E-value=5.6e-22 Score=191.62 Aligned_cols=146 Identities=25% Similarity=0.446 Sum_probs=124.5
Q ss_pred cCCCCCCccCccCCceEEEEEeCC-C--CEEEEEEcccccccccHHHHHHHHHHHhcC-CCCCccceeeEEecCCeeeEE
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLAD-G--KLVAVKRLKEERTSGGELQFQTEVKIISMA-VHRNLLRLYGFCTTVTEKLLV 374 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~~-~--~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv 374 (451)
++|+..++||+|+||+||+|...+ + ..+|+|.++..........+.+|+.++.++ +||||+++++++......+++
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 81 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA 81 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence 467888999999999999998753 3 347899886443333345689999999988 699999999999998899999
Q ss_pred EecCCCCChhHHhhccCC------------CCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCc
Q 013004 375 YPYMTNGSVASRLRERQS------------SLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQ 442 (451)
Q Consensus 375 ~ey~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~ 442 (451)
+||+++|+|.++++.... ....+++.....++.|++.||+|||+. +|+||||||+|||+++++.+
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~ 158 (297)
T cd05089 82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK---QFIHRDLAARNVLVGENLAS 158 (297)
T ss_pred EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCcCCcceEEECCCCeE
Confidence 999999999999976421 112488999999999999999999998 99999999999999999999
Q ss_pred cchhh
Q 013004 443 SSKTI 447 (451)
Q Consensus 443 ~i~df 447 (451)
|++||
T Consensus 159 kl~df 163 (297)
T cd05089 159 KIADF 163 (297)
T ss_pred EECCc
Confidence 99998
No 137
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=99.87 E-value=6.1e-22 Score=194.11 Aligned_cols=139 Identities=23% Similarity=0.316 Sum_probs=120.6
Q ss_pred CCccCcc--CCceEEEEEe-CCCCEEEEEEcccccccc-cHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEecCC
Q 013004 304 KNILGRG--GFGKVYKGRL-ADGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMT 379 (451)
Q Consensus 304 ~~~lG~G--~fg~Vy~~~~-~~~~~vAvK~~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~ 379 (451)
.++||+| +|++||++.. .+|+.||+|+++...... ....+.+|+.+++.++||||+++++++...+..++|+||++
T Consensus 3 ~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~ 82 (327)
T cd08227 3 LTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMA 82 (327)
T ss_pred hhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEeccC
Confidence 5789999 6789999986 568999999986543322 23357789999999999999999999999999999999999
Q ss_pred CCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 380 NGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 380 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+|+|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+++.||
T Consensus 83 ~~~l~~~~~~~~~--~~l~~~~~~~i~~qi~~~L~~LH~~---~iiH~dlkp~Nil~~~~~~~~l~~~ 145 (327)
T cd08227 83 YGSAKDLICTHFM--DGMSELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGL 145 (327)
T ss_pred CCcHHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCChhhEEEecCCcEEEccc
Confidence 9999999975432 2378999999999999999999998 9999999999999999999988886
No 138
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=99.87 E-value=6.8e-22 Score=189.57 Aligned_cols=142 Identities=27% Similarity=0.452 Sum_probs=122.1
Q ss_pred cCCCCCCccCccCCceEEEEEeC-----CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEec--CCee
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA-----DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTT--VTEK 371 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~-----~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~--~~~~ 371 (451)
.+|+..+.||+|+||.||+|.++ +++.||+|.++... ......+.+|+++++.++||||+++++++.. ....
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 82 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHST-AEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 82 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCC-HHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCce
Confidence 45777899999999999999753 47899999986432 2233468999999999999999999998754 3468
Q ss_pred eEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 372 LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 372 ~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
++|+||+++|+|.+++..... .++|..+..++.|++.||+|||+. +|+||||||+||++++++.++++||
T Consensus 83 ~lv~e~~~~~~L~~~l~~~~~---~l~~~~~~~~~~~l~~aL~~LH~~---~i~H~dlkp~nili~~~~~~~l~df 152 (284)
T cd05081 83 RLVMEYLPYGSLRDYLQKHRE---RLDHRKLLLYASQICKGMEYLGSK---RYVHRDLATRNILVESENRVKIGDF 152 (284)
T ss_pred EEEEEecCCCCHHHHHHhcCc---CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHhhEEECCCCeEEECCC
Confidence 999999999999999975432 389999999999999999999998 9999999999999999999999997
No 139
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=99.87 E-value=5.6e-22 Score=189.17 Aligned_cols=146 Identities=25% Similarity=0.484 Sum_probs=125.3
Q ss_pred cCCCCCCccCccCCceEEEEEeC------CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeee
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA------DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKL 372 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~------~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 372 (451)
++|+..+.||+|+||.||+|+.+ +.+.||+|.+...........+.+|++++++++|+||+++++++......+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 84 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY 84 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence 56888899999999999999864 246799998854332223357899999999999999999999999888999
Q ss_pred EEEecCCCCChhHHhhccCCC-----CCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 373 LVYPYMTNGSVASRLRERQSS-----LPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 373 lv~ey~~~gsL~~~l~~~~~~-----~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+||||+++|+|.+++...... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++++||
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~~~ 161 (275)
T cd05046 85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNA---RFVHRDLAARNCLVSSQREVKVSLL 161 (275)
T ss_pred EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhc---CcccCcCccceEEEeCCCcEEEccc
Confidence 999999999999999765421 12589999999999999999999998 9999999999999999999998876
No 140
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=99.87 E-value=4.6e-22 Score=212.25 Aligned_cols=146 Identities=22% Similarity=0.352 Sum_probs=125.6
Q ss_pred cCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccc--cHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEE
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSG--GELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 375 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (451)
++|+..+.||+|+||.||+|+.. +++.||+|+++...... ...+|.+|+.+++.++||||+++++++.+.+..+++|
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 46788899999999999999864 58999999987543222 2346899999999999999999999999999999999
Q ss_pred ecCCCCChhHHhhccCC-------CCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 376 PYMTNGSVASRLRERQS-------SLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 376 ey~~~gsL~~~l~~~~~-------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
||+++|+|.+++..... .....++.....++.|+++||+|||+. +|+||||||+|||++.++.++++||
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~---GIIHRDLKPeNILLd~dg~vKLiDF 157 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK---GVLHRDLKPDNILLGLFGEVVILDW 157 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC---CccccCCchheEEEcCCCCEEEEec
Confidence 99999999998864211 112356788899999999999999998 9999999999999999999999997
No 141
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.87 E-value=4.5e-22 Score=193.21 Aligned_cols=147 Identities=30% Similarity=0.442 Sum_probs=126.1
Q ss_pred hcCCCCCCccCccCCceEEEEEeC--------CCCEEEEEEcccccccccHHHHHHHHHHHhcC-CCCCccceeeEEecC
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLA--------DGKLVAVKRLKEERTSGGELQFQTEVKIISMA-VHRNLLRLYGFCTTV 368 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~--------~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~ 368 (451)
.++|...+.||+|+||.||+++.. +...+|+|.++.........++.+|+.++..+ +|+||+++++++...
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 96 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 96 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecC
Confidence 456888899999999999999752 23579999987543333344688899999999 799999999999999
Q ss_pred CeeeEEEecCCCCChhHHhhccCC------------CCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceee
Q 013004 369 TEKLLVYPYMTNGSVASRLRERQS------------SLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILL 436 (451)
Q Consensus 369 ~~~~lv~ey~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILl 436 (451)
+..++||||+++|+|.+++..... ....++|.+...++.|++.||+|||+. +++||||||+||++
T Consensus 97 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Nill 173 (307)
T cd05098 97 GPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLV 173 (307)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHHheEE
Confidence 999999999999999999976432 112488999999999999999999998 99999999999999
Q ss_pred CCCCCccchhh
Q 013004 437 DEDADQSSKTI 447 (451)
Q Consensus 437 d~~~~~~i~df 447 (451)
++++.++++||
T Consensus 174 ~~~~~~kL~df 184 (307)
T cd05098 174 TEDNVMKIADF 184 (307)
T ss_pred cCCCcEEECCC
Confidence 99999999997
No 142
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=99.87 E-value=5.3e-22 Score=188.78 Aligned_cols=142 Identities=30% Similarity=0.464 Sum_probs=124.3
Q ss_pred CCCCCCccCccCCceEEEEEeCC-C---CEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEE
Q 013004 300 GFSNKNILGRGGFGKVYKGRLAD-G---KLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 375 (451)
Q Consensus 300 ~f~~~~~lG~G~fg~Vy~~~~~~-~---~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (451)
+|+..+.||+|+||.||+|+... + ..||||.++.........+|..|+.+++.++||||+++++++......++||
T Consensus 5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 84 (269)
T cd05065 5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIIT 84 (269)
T ss_pred HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEE
Confidence 46667899999999999998643 3 3699999875433333457999999999999999999999999999999999
Q ss_pred ecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 376 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 376 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
||+++|+|.+++..... .+++.++..++.|++.|+.|||+. +++||||||+||+++.++.++++||
T Consensus 85 e~~~~~~L~~~l~~~~~---~~~~~~~~~i~~~l~~al~~lH~~---g~~H~dl~p~nili~~~~~~kl~df 150 (269)
T cd05065 85 EFMENGALDSFLRQNDG---QFTVIQLVGMLRGIAAGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDF 150 (269)
T ss_pred ecCCCCcHHHHHhhCCC---CCCHHHHHHHHHHHHHHHHHHHHC---CEeecccChheEEEcCCCcEEECCC
Confidence 99999999999976432 479999999999999999999998 9999999999999999999999997
No 143
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=99.87 E-value=5.6e-22 Score=190.61 Aligned_cols=147 Identities=31% Similarity=0.501 Sum_probs=127.4
Q ss_pred hcCCCCCCccCccCCceEEEEEeC------CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCee
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLA------DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEK 371 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~------~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 371 (451)
.++|+..+.||+|+||.||+|+.. ++..||+|.++.........++.+|+.+++.++||||+++++++......
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~ 83 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPM 83 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCcc
Confidence 467888899999999999999863 46789999987544333345789999999999999999999999998999
Q ss_pred eEEEecCCCCChhHHhhccCC------------------CCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCc
Q 013004 372 LLVYPYMTNGSVASRLRERQS------------------SLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAAN 433 (451)
Q Consensus 372 ~lv~ey~~~gsL~~~l~~~~~------------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~N 433 (451)
++++||+++|+|.+++..... ....+++..+..++.|++.||+|||+. +++||||||+|
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~---~i~H~dl~p~n 160 (288)
T cd05050 84 CLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSER---KFVHRDLATRN 160 (288)
T ss_pred EEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CeecccccHhh
Confidence 999999999999999975321 123478889999999999999999998 99999999999
Q ss_pred eeeCCCCCccchhh
Q 013004 434 ILLDEDADQSSKTI 447 (451)
Q Consensus 434 ILld~~~~~~i~df 447 (451)
|++++++.++++||
T Consensus 161 il~~~~~~~~l~df 174 (288)
T cd05050 161 CLVGENMVVKIADF 174 (288)
T ss_pred eEecCCCceEECcc
Confidence 99999999999997
No 144
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=99.87 E-value=3.1e-22 Score=197.04 Aligned_cols=148 Identities=32% Similarity=0.454 Sum_probs=123.4
Q ss_pred HhcCCCCCCccCccCCceEEEEEeC------CCCEEEEEEcccccccccHHHHHHHHHHHhcC-CCCCccceeeEEecC-
Q 013004 297 ATDGFSNKNILGRGGFGKVYKGRLA------DGKLVAVKRLKEERTSGGELQFQTEVKIISMA-VHRNLLRLYGFCTTV- 368 (451)
Q Consensus 297 ~~~~f~~~~~lG~G~fg~Vy~~~~~------~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~- 368 (451)
..++|+..+.||+|+||.||+|+.. +++.||+|+++..........+.+|+.++..+ +|+||++++++|...
T Consensus 5 ~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~ 84 (337)
T cd05054 5 PRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPG 84 (337)
T ss_pred CHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCC
Confidence 3457888899999999999999642 24789999986543333344678899999999 799999999988754
Q ss_pred CeeeEEEecCCCCChhHHhhccCCC-------------------------------------------------------
Q 013004 369 TEKLLVYPYMTNGSVASRLRERQSS------------------------------------------------------- 393 (451)
Q Consensus 369 ~~~~lv~ey~~~gsL~~~l~~~~~~------------------------------------------------------- 393 (451)
...++++||+++|+|.+++......
T Consensus 85 ~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (337)
T cd05054 85 GPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDE 164 (337)
T ss_pred CCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhH
Confidence 5678999999999999998643210
Q ss_pred --CCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 394 --LPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 394 --~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
...++|..+..++.|++.||+|||+. +|+||||||+|||+++++.++++||
T Consensus 165 ~~~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivHrDikp~Nill~~~~~vkL~Df 217 (337)
T cd05054 165 LYKEPLTLEDLISYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDF 217 (337)
T ss_pred HhhcCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEeCCCcEEEecc
Confidence 12579999999999999999999998 9999999999999999999999997
No 145
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=99.87 E-value=9.3e-22 Score=186.51 Aligned_cols=146 Identities=20% Similarity=0.313 Sum_probs=128.1
Q ss_pred cCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccc--cccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEE
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 375 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (451)
++|+..+.||+|+||.||+|... +++.||+|.++.... ......+.+|++++..++|+|++++++++...+..+++|
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 56888899999999999999875 789999998864322 222347889999999999999999999999999999999
Q ss_pred ecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 376 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 376 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
||+++|+|.+++.........+++.++..++.+++.|+.|||+. +|+||||||+||+++.++.++++||
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~nil~~~~~~~~l~d~ 150 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSK---RIMHRDIKPANVFITATGVVKLGDL 150 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecCCcChhhEEECCCCcEEEecc
Confidence 99999999999875433334588999999999999999999998 9999999999999999999999997
No 146
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=99.87 E-value=8e-22 Score=189.79 Aligned_cols=145 Identities=32% Similarity=0.455 Sum_probs=123.7
Q ss_pred CCCCCCccCccCCceEEEEEeC------CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeE
Q 013004 300 GFSNKNILGRGGFGKVYKGRLA------DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLL 373 (451)
Q Consensus 300 ~f~~~~~lG~G~fg~Vy~~~~~------~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 373 (451)
+|+..+.||+|+||.||+|+.. ....+|+|.+...........+.+|+.+++.++||||+++++.+...+..++
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 80 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL 80 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence 4677789999999999999753 2357899988654433334578899999999999999999999999999999
Q ss_pred EEecCCCCChhHHhhccCC--------------------CCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCc
Q 013004 374 VYPYMTNGSVASRLRERQS--------------------SLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAAN 433 (451)
Q Consensus 374 v~ey~~~gsL~~~l~~~~~--------------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~N 433 (451)
++||+.+|+|.+++..... ....+++.....++.|++.||+|||+. +|+||||||+|
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~ivH~dikp~n 157 (290)
T cd05045 81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEM---KLVHRDLAARN 157 (290)
T ss_pred EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHC---Ceehhhhhhhe
Confidence 9999999999999865321 113478999999999999999999998 99999999999
Q ss_pred eeeCCCCCccchhh
Q 013004 434 ILLDEDADQSSKTI 447 (451)
Q Consensus 434 ILld~~~~~~i~df 447 (451)
|++++++.++++||
T Consensus 158 ill~~~~~~kl~df 171 (290)
T cd05045 158 VLVAEGRKMKISDF 171 (290)
T ss_pred EEEcCCCcEEeccc
Confidence 99999999999997
No 147
>PHA03212 serine/threonine kinase US3; Provisional
Probab=99.87 E-value=4.3e-22 Score=199.72 Aligned_cols=135 Identities=24% Similarity=0.304 Sum_probs=120.7
Q ss_pred hcCCCCCCccCccCCceEEEEEe-CCCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEe
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 376 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 376 (451)
..+|+..+.||+|+||.||+|.. .+++.||+|.... ..+.+|+.+++.++|||||++++++......++|+|
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~-------~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e 163 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR-------GGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILP 163 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh-------hhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEe
Confidence 45799999999999999999986 4688999996532 246789999999999999999999999999999999
Q ss_pred cCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 377 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 377 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|+. ++|..++.... .+++.++..++.|++.||.|||++ +|+||||||+|||++.++.++|+||
T Consensus 164 ~~~-~~L~~~l~~~~----~l~~~~~~~i~~qi~~aL~ylH~~---~IvHrDiKP~NIll~~~~~vkL~DF 226 (391)
T PHA03212 164 RYK-TDLYCYLAAKR----NIAICDILAIERSVLRAIQYLHEN---RIIHRDIKAENIFINHPGDVCLGDF 226 (391)
T ss_pred cCC-CCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHhEEEcCCCCEEEEeC
Confidence 995 78888886543 378999999999999999999998 9999999999999999999999998
No 148
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=99.87 E-value=7.8e-22 Score=188.89 Aligned_cols=142 Identities=27% Similarity=0.429 Sum_probs=119.3
Q ss_pred cCCCCCCccCccCCceEEEEEeC-CCC----EEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeE
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA-DGK----LVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLL 373 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~-~~~----~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 373 (451)
++|...+.||+|+||+||+|.+. +++ .+|+|.+..........++..|+..++.++||||+++++++.. ...++
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~~~~~ 85 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-ASLQL 85 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECC-CccEE
Confidence 46777899999999999999863 344 4778877533222223467788888999999999999998754 45789
Q ss_pred EEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 374 VYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 374 v~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
++||+++|+|.+++..... .++|.....++.|++.||+|||+. +++||||||+||++++++.+|++||
T Consensus 86 i~e~~~~gsL~~~l~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~kl~Df 153 (279)
T cd05111 86 VTQLSPLGSLLDHVRQHRD---SLDPQRLLNWCVQIAKGMYYLEEH---RMVHRNLAARNILLKSDSIVQIADF 153 (279)
T ss_pred EEEeCCCCcHHHHHHhccc---CCCHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEEcCC
Confidence 9999999999999976432 489999999999999999999998 8999999999999999999999998
No 149
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=99.87 E-value=9.9e-22 Score=188.38 Aligned_cols=138 Identities=30% Similarity=0.473 Sum_probs=120.1
Q ss_pred CCCCccCccCCceEEEEEe-----CCCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecC--CeeeEE
Q 013004 302 SNKNILGRGGFGKVYKGRL-----ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTV--TEKLLV 374 (451)
Q Consensus 302 ~~~~~lG~G~fg~Vy~~~~-----~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~lv 374 (451)
+..+.||+|+||+||++.+ .+++.||+|.++..........|.+|+++++.++||||+++++++... ...+++
T Consensus 7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 86 (283)
T cd05080 7 KKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLI 86 (283)
T ss_pred eeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEE
Confidence 6778999999999988653 357889999987543333345788999999999999999999988653 357899
Q ss_pred EecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 375 YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 375 ~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|||+++|+|.+++... .++|.++..++.|++.||.|||+. +|+||||||+||++++++.++++||
T Consensus 87 ~e~~~~~~l~~~~~~~-----~l~~~~~~~i~~~l~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~df 151 (283)
T cd05080 87 MEYVPLGSLRDYLPKH-----KLNLAQLLLFAQQICEGMAYLHSQ---HYIHRDLAARNVLLDNDRLVKIGDF 151 (283)
T ss_pred ecCCCCCCHHHHHHHc-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccccChheEEEcCCCcEEEeec
Confidence 9999999999999753 289999999999999999999998 9999999999999999999999997
No 150
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=99.87 E-value=1e-21 Score=185.77 Aligned_cols=134 Identities=25% Similarity=0.382 Sum_probs=116.5
Q ss_pred cCccCCceEEEEEeC---CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEecCCCCCh
Q 013004 307 LGRGGFGKVYKGRLA---DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSV 383 (451)
Q Consensus 307 lG~G~fg~Vy~~~~~---~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~gsL 383 (451)
||+|+||.||+|.+. ++..||+|.++..........+.+|+.++++++|+||+++++++. ....++||||+++|+|
T Consensus 3 ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~L 81 (257)
T cd05115 3 LGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGPL 81 (257)
T ss_pred cCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCCH
Confidence 899999999999764 355799999865543333456899999999999999999999875 4578999999999999
Q ss_pred hHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 384 ASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 384 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
.+++.... ..+++.++..++.|++.||.|||+. +++||||||+||+++.++.++++||
T Consensus 82 ~~~l~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~df 139 (257)
T cd05115 82 NKFLSGKK---DEITVSNVVELMHQVSMGMKYLEGK---NFVHRDLAARNVLLVNQHYAKISDF 139 (257)
T ss_pred HHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHHhc---CeeecccchheEEEcCCCcEEeccC
Confidence 99987543 2489999999999999999999998 9999999999999999999999997
No 151
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=99.87 E-value=7.8e-22 Score=188.72 Aligned_cols=143 Identities=28% Similarity=0.468 Sum_probs=123.1
Q ss_pred hcCCCCCCccCccCCceEEEEEe-CCCC----EEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeee
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRL-ADGK----LVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKL 372 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~-~~~~----~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 372 (451)
.++|+..+.||+|+||.||+|++ .+++ .||+|.++..........+.+|+.++..++|+||+++++++.. ...+
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~ 84 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STVQ 84 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCcE
Confidence 45688889999999999999985 3444 4899998654433344578899999999999999999999875 4578
Q ss_pred EEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 373 LVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 373 lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+++||+++|+|.+++++... .+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+|++||
T Consensus 85 l~~~~~~~g~l~~~l~~~~~---~~~~~~~~~~~~qi~~~L~~lH~~---~iiH~dlkp~Nil~~~~~~~kL~df 153 (279)
T cd05109 85 LVTQLMPYGCLLDYVRENKD---RIGSQDLLNWCVQIAKGMSYLEEV---RLVHRDLAARNVLVKSPNHVKITDF 153 (279)
T ss_pred EEEEcCCCCCHHHHHhhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEcCCCcEEECCC
Confidence 99999999999999976432 488999999999999999999998 9999999999999999999999998
No 152
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=99.87 E-value=8.6e-22 Score=187.14 Aligned_cols=144 Identities=28% Similarity=0.507 Sum_probs=125.9
Q ss_pred hcCCCCCCccCccCCceEEEEEeC-CC---CEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeE
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLA-DG---KLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLL 373 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~-~~---~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 373 (451)
.++|+..+.||+|+||.||+|+.. ++ ..+|+|.++..........+..|++++..++|+||+++.+++...+..++
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMI 83 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEE
Confidence 356778899999999999999864 33 37999998654333334578999999999999999999999999999999
Q ss_pred EEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 374 VYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 374 v~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
||||+++++|.+++.... ..++|.++..++.|++.|++|||+. +++||||||+||++++++.++++||
T Consensus 84 v~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nili~~~~~~kl~df 151 (268)
T cd05063 84 ITEYMENGALDKYLRDHD---GEFSSYQLVGMLRGIAAGMKYLSDM---NYVHRDLAARNILVNSNLECKVSDF 151 (268)
T ss_pred EEEcCCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEEcCCCcEEECCC
Confidence 999999999999997643 2489999999999999999999998 9999999999999999999999997
No 153
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=99.87 E-value=1e-21 Score=188.97 Aligned_cols=142 Identities=29% Similarity=0.504 Sum_probs=117.1
Q ss_pred CCCCCCccCccCCceEEEEEeC--CCCEEEEEEcccccccc-cHHHHHHHHHHHhcC---CCCCccceeeEEec-----C
Q 013004 300 GFSNKNILGRGGFGKVYKGRLA--DGKLVAVKRLKEERTSG-GELQFQTEVKIISMA---VHRNLLRLYGFCTT-----V 368 (451)
Q Consensus 300 ~f~~~~~lG~G~fg~Vy~~~~~--~~~~vAvK~~~~~~~~~-~~~~~~~E~~~l~~l---~H~niv~l~~~~~~-----~ 368 (451)
+|+..+.||+|+||+||+|+.. +++.||+|.++...... ....+.+|+.++..+ +||||++++++|.. .
T Consensus 2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~ 81 (290)
T cd07862 2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE 81 (290)
T ss_pred CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCC
Confidence 5778899999999999999863 46789999986543222 223566777776655 69999999998852 3
Q ss_pred CeeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 369 TEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 369 ~~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
...++|+||+. ++|.+++..... ..+++..+..++.|++.||.|||+. +|+||||||+|||++.++.++++||
T Consensus 82 ~~~~lv~e~~~-~~l~~~~~~~~~--~~~~~~~~~~i~~qi~~aL~~lH~~---~iiH~dlkp~Nil~~~~~~~kl~Df 154 (290)
T cd07862 82 TKLTLVFEHVD-QDLTTYLDKVPE--PGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADF 154 (290)
T ss_pred CcEEEEEccCC-CCHHHHHHhCCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEcCCCCEEEccc
Confidence 45899999996 699998876432 2478999999999999999999998 9999999999999999999999998
No 154
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=99.87 E-value=1.2e-21 Score=187.50 Aligned_cols=136 Identities=26% Similarity=0.364 Sum_probs=117.8
Q ss_pred cCccCCceEEEEEeC-CCCEEEEEEccccccc--ccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEecCCCCCh
Q 013004 307 LGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS--GGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSV 383 (451)
Q Consensus 307 lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~gsL 383 (451)
||+|+||.||+++.+ +|+.||+|.+...... .....+..|++++..++||||+++++++......++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 699999999999864 5899999998643221 1223456799999999999999999999999999999999999999
Q ss_pred hHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 384 ASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 384 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||++++++.++++||
T Consensus 81 ~~~~~~~~~--~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~~l~Df 139 (277)
T cd05607 81 KYHIYNVGE--RGLEMERVIHYSAQITCGILHLHSM---DIVYRDMKPENVLLDDQGNCRLSDL 139 (277)
T ss_pred HHHHHhccc--cCCCHHHHHHHHHHHHHHHHHHHHC---CEEEccCChHhEEEcCCCCEEEeec
Confidence 988865432 2478999999999999999999998 9999999999999999999999997
No 155
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=99.87 E-value=6.8e-22 Score=197.35 Aligned_cols=140 Identities=26% Similarity=0.351 Sum_probs=121.2
Q ss_pred CCCCCCccCccCCceEEEEEe-CCCCEEEEEEccccccc-ccHHHHHHHHHHHhcCCCCCccceeeEEecCC-----eee
Q 013004 300 GFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTS-GGELQFQTEVKIISMAVHRNLLRLYGFCTTVT-----EKL 372 (451)
Q Consensus 300 ~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-----~~~ 372 (451)
+|+..+.||+|+||.||+|.. .+++.||||++...... .....+.+|++++..++|+||+++++++...+ ..+
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 477889999999999999986 46899999998643221 22346889999999999999999999998766 789
Q ss_pred EEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 373 LVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 373 lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+|+||+. ++|.+.+.... .+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+|++||
T Consensus 81 lv~e~~~-~~l~~~~~~~~----~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nili~~~~~~kL~Df 147 (372)
T cd07853 81 VVTELMQ-SDLHKIIVSPQ----PLSSDHVKVFLYQILRGLKYLHSA---GILHRDIKPGNLLVNSNCVLKICDF 147 (372)
T ss_pred EEeeccc-cCHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHHEEECCCCCEEeccc
Confidence 9999997 58888775532 489999999999999999999999 9999999999999999999999998
No 156
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=99.87 E-value=1.1e-21 Score=185.19 Aligned_cols=142 Identities=30% Similarity=0.500 Sum_probs=126.9
Q ss_pred hcCCCCCCccCccCCceEEEEEeCCCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEec
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 377 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey 377 (451)
.++|+..+.||+|+||.||+|... ++.||+|.++.... ...++.+|+.++..++|+||+++++++......++||||
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 81 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST--AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEY 81 (256)
T ss_pred hhhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh--HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEe
Confidence 456788899999999999999874 78999999865432 345789999999999999999999999988899999999
Q ss_pred CCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 378 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 378 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+++++|.+++..... ..++|.....++.|++.|+.|||+. +++||||||+||++++++.++++||
T Consensus 82 ~~~~~L~~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~Nili~~~~~~~l~d~ 146 (256)
T cd05039 82 MAKGSLVDYLRSRGR--AVITLAQQLGFALDVCEGMEYLEEK---NFVHRDLAARNVLVSEDLVAKVSDF 146 (256)
T ss_pred cCCCcHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CccchhcccceEEEeCCCCEEEccc
Confidence 999999999976542 2489999999999999999999999 9999999999999999999999997
No 157
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=99.87 E-value=9e-22 Score=190.54 Aligned_cols=142 Identities=27% Similarity=0.463 Sum_probs=124.7
Q ss_pred cCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEec
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 377 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey 377 (451)
++|...+.||+|+||.||+|+.+ +++.||+|.++..........+.+|+.+++.++||||+++++++...+..++|+||
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~ 85 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 85 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence 46788899999999999999864 57899999986544333344678899999999999999999999999999999999
Q ss_pred CCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 378 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 378 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+. ++|.+++..... .+++.....++.|++.||+|||+. +|+||||||+||++++++.++++||
T Consensus 86 ~~-~~l~~~l~~~~~---~~~~~~~~~~~~qi~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~df 148 (301)
T cd07873 86 LD-KDLKQYLDDCGN---SINMHNVKLFLFQLLRGLNYCHRR---KVLHRDLKPQNLLINERGELKLADF 148 (301)
T ss_pred cc-cCHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHHHEEECCCCcEEECcC
Confidence 97 589888876432 378899999999999999999998 9999999999999999999999998
No 158
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=99.87 E-value=7e-22 Score=188.58 Aligned_cols=147 Identities=28% Similarity=0.442 Sum_probs=126.3
Q ss_pred hcCCCCCCccCccCCceEEEEEeCC------CCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCee
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLAD------GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEK 371 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~~------~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 371 (451)
.++|...+.||+|+||.||+|...+ +..||+|.+...........+.+|+.+++.++|+||+++++++......
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~ 84 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPT 84 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCc
Confidence 4567888999999999999998642 3689999986543333344688999999999999999999999999999
Q ss_pred eEEEecCCCCChhHHhhccCCC------CCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccch
Q 013004 372 LLVYPYMTNGSVASRLRERQSS------LPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSK 445 (451)
Q Consensus 372 ~lv~ey~~~gsL~~~l~~~~~~------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~ 445 (451)
++||||+++|+|.+++...... ...++|..+..++.|++.||.|||+. +|+||||||+||++++++.++++
T Consensus 85 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~di~p~nill~~~~~~kl~ 161 (277)
T cd05032 85 LVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK---KFVHRDLAARNCMVAEDLTVKIG 161 (277)
T ss_pred EEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccChheEEEcCCCCEEEC
Confidence 9999999999999999754321 12478899999999999999999998 99999999999999999999999
Q ss_pred hh
Q 013004 446 TI 447 (451)
Q Consensus 446 df 447 (451)
||
T Consensus 162 df 163 (277)
T cd05032 162 DF 163 (277)
T ss_pred Cc
Confidence 97
No 159
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=99.87 E-value=5.4e-22 Score=204.26 Aligned_cols=143 Identities=17% Similarity=0.235 Sum_probs=123.4
Q ss_pred CCCCCccCccCCceEEEEEeC-C-CCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEecC
Q 013004 301 FSNKNILGRGGFGKVYKGRLA-D-GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYM 378 (451)
Q Consensus 301 f~~~~~lG~G~fg~Vy~~~~~-~-~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~ 378 (451)
|...+.||+|+||.||+|... + ++.||+|.+.... ......+.+|+.+++.++|||||++++++...+..++||||+
T Consensus 69 y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~-~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~ 147 (478)
T PTZ00267 69 YVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLND-ERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYG 147 (478)
T ss_pred EEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCC-HHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECC
Confidence 777889999999999999753 3 5778888764322 222335788999999999999999999999999999999999
Q ss_pred CCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 379 TNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 379 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
++|+|.+++.........+++.++..++.|++.||.|||+. +|+||||||+|||++.++.+|++||
T Consensus 148 ~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~~~~~~kL~DF 213 (478)
T PTZ00267 148 SGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSR---KMMHRDLKSANIFLMPTGIIKLGDF 213 (478)
T ss_pred CCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCcCHHhEEECCCCcEEEEeC
Confidence 99999998875433334588999999999999999999998 9999999999999999999999998
No 160
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=99.87 E-value=1.2e-21 Score=188.91 Aligned_cols=147 Identities=28% Similarity=0.410 Sum_probs=126.8
Q ss_pred hcCCCCCCccCccCCceEEEEEeCC-----------------CCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccc
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLAD-----------------GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLR 360 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~~-----------------~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~ 360 (451)
.++|...+.||+|+||.||+|+..+ +..||+|.+...........+.+|+++++.++||||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 4568888999999999999987532 24689999875543334457899999999999999999
Q ss_pred eeeEEecCCeeeEEEecCCCCChhHHhhccCC-------CCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCc
Q 013004 361 LYGFCTTVTEKLLVYPYMTNGSVASRLRERQS-------SLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAAN 433 (451)
Q Consensus 361 l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~-------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~N 433 (451)
+++++......++++||+++++|.+++..... ....+++.....++.|++.||+|||+. +|+||||||+|
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~---~i~H~dlkp~N 160 (296)
T cd05051 84 LLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL---NFVHRDLATRN 160 (296)
T ss_pred EEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc---Cccccccchhc
Confidence 99999998999999999999999999976541 112489999999999999999999998 99999999999
Q ss_pred eeeCCCCCccchhh
Q 013004 434 ILLDEDADQSSKTI 447 (451)
Q Consensus 434 ILld~~~~~~i~df 447 (451)
|++++++.++++||
T Consensus 161 ili~~~~~~~l~df 174 (296)
T cd05051 161 CLVGKNYTIKIADF 174 (296)
T ss_pred eeecCCCceEEccc
Confidence 99999999999997
No 161
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=99.87 E-value=7.3e-22 Score=188.92 Aligned_cols=148 Identities=26% Similarity=0.418 Sum_probs=126.9
Q ss_pred HhcCCCCCCccCccCCceEEEEEeCC-----CCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEec-CCe
Q 013004 297 ATDGFSNKNILGRGGFGKVYKGRLAD-----GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTT-VTE 370 (451)
Q Consensus 297 ~~~~f~~~~~lG~G~fg~Vy~~~~~~-----~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~-~~~ 370 (451)
..++|+..+.||+|+||.||+|...+ ++.||+|+++..........+.+|+.+++.++|+||+++++++.. ...
T Consensus 4 ~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~ 83 (280)
T cd05043 4 SRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEP 83 (280)
T ss_pred chhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 45678888999999999999998754 688999998654333334568899999999999999999998876 467
Q ss_pred eeEEEecCCCCChhHHhhccCCC----CCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchh
Q 013004 371 KLLVYPYMTNGSVASRLRERQSS----LPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKT 446 (451)
Q Consensus 371 ~~lv~ey~~~gsL~~~l~~~~~~----~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~d 446 (451)
.++++||+++|+|.+++...... ...+++.++..++.|++.||+|||+. +++||||||+||++++++.+|++|
T Consensus 84 ~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kl~d 160 (280)
T cd05043 84 PFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKR---GVIHKDIAARNCVIDEELQVKITD 160 (280)
T ss_pred CEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCHhhEEEcCCCcEEECC
Confidence 89999999999999998764321 13589999999999999999999998 999999999999999999999998
Q ss_pred h
Q 013004 447 I 447 (451)
Q Consensus 447 f 447 (451)
|
T Consensus 161 ~ 161 (280)
T cd05043 161 N 161 (280)
T ss_pred C
Confidence 6
No 162
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=99.87 E-value=1.1e-21 Score=186.13 Aligned_cols=142 Identities=29% Similarity=0.420 Sum_probs=125.1
Q ss_pred cCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEec
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 377 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey 377 (451)
.+|+..+.||+|+||.||+|.+. +++.||+|.++... ....++.+|+.++..++|+||+++++++...+..+++|||
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT--MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF 83 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc--hHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEe
Confidence 35677788999999999999864 58899999986432 2234689999999999999999999999999999999999
Q ss_pred CCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 378 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 378 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+++|+|.+++..... ..+++..+..++.|+++||+|||+. +++||||||+||++++++.++++||
T Consensus 84 ~~~~~L~~~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~df 148 (263)
T cd05052 84 MTYGNLLDYLRECNR--QEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADF 148 (263)
T ss_pred CCCCcHHHHHHhCCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCcEEeCCC
Confidence 999999999976432 2489999999999999999999998 9999999999999999999999997
No 163
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=99.87 E-value=1e-22 Score=199.02 Aligned_cols=130 Identities=32% Similarity=0.493 Sum_probs=116.4
Q ss_pred CCCCccCccCCceEEEEEeCCCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEecCCCC
Q 013004 302 SNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNG 381 (451)
Q Consensus 302 ~~~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~g 381 (451)
...+-||.|+.|.||+|+++ ++.||||+++.. -..+|..+.+++|+||+.+.|+|......++|||||..|
T Consensus 127 sELeWlGSGaQGAVF~Grl~-netVAVKKV~el--------kETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~G 197 (904)
T KOG4721|consen 127 SELEWLGSGAQGAVFLGRLH-NETVAVKKVREL--------KETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQG 197 (904)
T ss_pred hhhhhhccCcccceeeeecc-CceehhHHHhhh--------hhhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccc
Confidence 44567999999999999995 689999988542 245788899999999999999999999999999999999
Q ss_pred ChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 382 SVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 382 sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
-|+..|+.... +.-.....+..+||.||.|||.+ .|||||||+-||||..+..+||+||
T Consensus 198 qL~~VLka~~~----itp~llv~Wsk~IA~GM~YLH~h---KIIHRDLKSPNiLIs~~d~VKIsDF 256 (904)
T KOG4721|consen 198 QLYEVLKAGRP----ITPSLLVDWSKGIAGGMNYLHLH---KIIHRDLKSPNILISYDDVVKISDF 256 (904)
T ss_pred cHHHHHhccCc----cCHHHHHHHHHHhhhhhHHHHHh---hHhhhccCCCceEeeccceEEeccc
Confidence 99999987653 56667778899999999999999 9999999999999999999999999
No 164
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=99.87 E-value=2.4e-22 Score=188.00 Aligned_cols=141 Identities=24% Similarity=0.391 Sum_probs=120.9
Q ss_pred cCCCCCCccCccCCceEEEEEe-CCCCEEEEEEcc-cccccccHHHHHHHHHHHhcCCCCCccceeeEEec-----CCee
Q 013004 299 DGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLK-EERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTT-----VTEK 371 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~-~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~-----~~~~ 371 (451)
..|...+.||+|+||.|..+.. ++|+.||||++. .........+-.+|+.++..++|+||+.+.+.+.. .+..
T Consensus 22 ~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~Dv 101 (359)
T KOG0660|consen 22 RYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDV 101 (359)
T ss_pred ceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeeccccccccccee
Confidence 3455578899999999999986 578999999985 22233334567899999999999999999998765 4578
Q ss_pred eEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 372 LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 372 ~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|+|+|+|+ -||...++.... ++......+.+|+++||.|+|+. +|+||||||+|+|++.|.+.||+||
T Consensus 102 YiV~elMe-tDL~~iik~~~~----L~d~H~q~f~YQiLrgLKyiHSA---nViHRDLKPsNll~n~~c~lKI~DF 169 (359)
T KOG0660|consen 102 YLVFELME-TDLHQIIKSQQD----LTDDHAQYFLYQILRGLKYIHSA---NVIHRDLKPSNLLLNADCDLKICDF 169 (359)
T ss_pred EEehhHHh-hHHHHHHHcCcc----ccHHHHHHHHHHHHHhcchhhcc---cccccccchhheeeccCCCEEeccc
Confidence 99999994 589999877643 78889999999999999999999 9999999999999999999999998
No 165
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.87 E-value=1.2e-21 Score=186.09 Aligned_cols=142 Identities=27% Similarity=0.417 Sum_probs=125.4
Q ss_pred hcCCCCCCccCccCCceEEEEEe-CCCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEe
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 376 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 376 (451)
.++|+..+.||+|+||.||+|+. .+++.||+|+++.... .....+.+|+.++..++||||+++++++...+..++|+|
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~-~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e 86 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPG-DDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICME 86 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCcc-chHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEe
Confidence 35688889999999999999986 5688999999864322 223457889999999999999999999999999999999
Q ss_pred cCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 377 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 377 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|+++++|.+++.... .+++.++..++.|++.|+.|||+. +|+|||+||+||++++++.++++||
T Consensus 87 ~~~~~~L~~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nill~~~~~~~l~df 150 (267)
T cd06646 87 YCGGGSLQDIYHVTG----PLSELQIAYVCRETLQGLAYLHSK---GKMHRDIKGANILLTDNGDVKLADF 150 (267)
T ss_pred CCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEECcC
Confidence 999999999987543 378999999999999999999998 9999999999999999999999997
No 166
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.87 E-value=8.4e-22 Score=191.98 Aligned_cols=149 Identities=28% Similarity=0.444 Sum_probs=126.3
Q ss_pred HhcCCCCCCccCccCCceEEEEEeC--------CCCEEEEEEcccccccccHHHHHHHHHHHhcC-CCCCccceeeEEec
Q 013004 297 ATDGFSNKNILGRGGFGKVYKGRLA--------DGKLVAVKRLKEERTSGGELQFQTEVKIISMA-VHRNLLRLYGFCTT 367 (451)
Q Consensus 297 ~~~~f~~~~~lG~G~fg~Vy~~~~~--------~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~ 367 (451)
..++|...+.||+|+||.||+|+.. +...+|+|.++..........+..|+.++..+ +||||+++++++..
T Consensus 10 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 89 (314)
T cd05099 10 PRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQ 89 (314)
T ss_pred cHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEcc
Confidence 3456788899999999999999742 24579999987543333345688999999999 59999999999998
Q ss_pred CCeeeEEEecCCCCChhHHhhccCC------------CCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCcee
Q 013004 368 VTEKLLVYPYMTNGSVASRLRERQS------------SLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANIL 435 (451)
Q Consensus 368 ~~~~~lv~ey~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NIL 435 (451)
....++++||+++|+|.+++..... ....++|.+...++.|++.||.|||+. +|+||||||+|||
T Consensus 90 ~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Nil 166 (314)
T cd05099 90 EGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR---RCIHRDLAARNVL 166 (314)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHC---CeeeccccceeEE
Confidence 8899999999999999999976421 123488999999999999999999998 9999999999999
Q ss_pred eCCCCCccchhhh
Q 013004 436 LDEDADQSSKTIL 448 (451)
Q Consensus 436 ld~~~~~~i~df~ 448 (451)
+++++.+|++||=
T Consensus 167 l~~~~~~kL~Dfg 179 (314)
T cd05099 167 VTEDNVMKIADFG 179 (314)
T ss_pred EcCCCcEEEcccc
Confidence 9999999999973
No 167
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=99.87 E-value=1.1e-21 Score=185.47 Aligned_cols=144 Identities=30% Similarity=0.463 Sum_probs=128.6
Q ss_pred HhcCCCCCCccCccCCceEEEEEeCCCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEe
Q 013004 297 ATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 376 (451)
Q Consensus 297 ~~~~f~~~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 376 (451)
..++|...+.||+|+||.||+|...+++.||||.+.... ....++.+|+.+++.++|+||+++++++......+++||
T Consensus 4 ~~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 81 (261)
T cd05034 4 PRESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT--MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTE 81 (261)
T ss_pred chhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCc--cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEe
Confidence 456788889999999999999998778899999986532 233578999999999999999999999998889999999
Q ss_pred cCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 377 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 377 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|+++++|.+++..... ..+++.++..++.|++.|+.|||+. +++||||||+||++++++.++++||
T Consensus 82 ~~~~~~L~~~i~~~~~--~~~~~~~~~~~~~~i~~al~~lh~~---~i~h~di~p~nili~~~~~~~l~d~ 147 (261)
T cd05034 82 YMSKGSLLDFLKSGEG--KKLRLPQLVDMAAQIAEGMAYLESR---NYIHRDLAARNILVGENLVCKIADF 147 (261)
T ss_pred ccCCCCHHHHHhcccc--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcchheEEEcCCCCEEECcc
Confidence 9999999999976532 2489999999999999999999998 9999999999999999999999997
No 168
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=99.87 E-value=1.1e-21 Score=185.59 Aligned_cols=143 Identities=28% Similarity=0.425 Sum_probs=125.5
Q ss_pred HhcCCCCCCccCccCCceEEEEEeCCCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEe
Q 013004 297 ATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 376 (451)
Q Consensus 297 ~~~~f~~~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 376 (451)
..++|+..+.||+|+||.||+|..++++.||+|.+..... ....+.+|+.+++.++|+||+++++++ ..+..++++|
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~--~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~~v~e 80 (260)
T cd05067 4 PRETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSM--SPEAFLAEANLMKQLQHPRLVRLYAVV-TQEPIYIITE 80 (260)
T ss_pred chHHceeeeeeccCccceEEeeecCCCceEEEEEecCCCC--cHHHHHHHHHHHHhcCCcCeeeEEEEE-ccCCcEEEEE
Confidence 3467888899999999999999988889999999865332 234789999999999999999999886 4567899999
Q ss_pred cCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 377 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 377 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|+++|+|.+++..... ..+++.++..++.|++.||+|||+. +++||||||+||++++++.++++||
T Consensus 81 ~~~~~~L~~~~~~~~~--~~~~~~~~~~i~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~df 146 (260)
T cd05067 81 YMENGSLVDFLKTPEG--IKLTINKLIDMAAQIAEGMAFIERK---NYIHRDLRAANILVSETLCCKIADF 146 (260)
T ss_pred cCCCCCHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHHhEEEcCCCCEEEccC
Confidence 9999999999876432 3488999999999999999999998 9999999999999999999999997
No 169
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=99.87 E-value=1.7e-21 Score=185.59 Aligned_cols=140 Identities=29% Similarity=0.497 Sum_probs=119.6
Q ss_pred CccCccCCceEEEEEeCC-CC--EEEEEEcccccccccHHHHHHHHHHHhcC-CCCCccceeeEEecCCeeeEEEecCCC
Q 013004 305 NILGRGGFGKVYKGRLAD-GK--LVAVKRLKEERTSGGELQFQTEVKIISMA-VHRNLLRLYGFCTTVTEKLLVYPYMTN 380 (451)
Q Consensus 305 ~~lG~G~fg~Vy~~~~~~-~~--~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~ey~~~ 380 (451)
++||+|+||.||+|+..+ +. .+|+|.++..........+.+|+.++.++ +||||+++++++......+++|||+++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 80 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence 468999999999998753 43 47889886543333445788999999999 799999999999999999999999999
Q ss_pred CChhHHhhccCC------------CCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 381 GSVASRLRERQS------------SLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 381 gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|+|.+++..... ....+++.+...++.|++.|++|||+. +++||||||+||++++++.++++||
T Consensus 81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nili~~~~~~kl~df 156 (270)
T cd05047 81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADF 156 (270)
T ss_pred CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccccceEEEcCCCeEEECCC
Confidence 999999976431 122478999999999999999999998 9999999999999999999999997
No 170
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=99.87 E-value=1.2e-21 Score=187.48 Aligned_cols=142 Identities=27% Similarity=0.498 Sum_probs=123.4
Q ss_pred cCCCCCCccCccCCceEEEEEeC-CCC----EEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeE
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA-DGK----LVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLL 373 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~-~~~----~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 373 (451)
++|+..+.||+|+||.||+|.++ +++ .+|+|.++..........+.+|+.+++.++|+||+++++++.. ...++
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~ 85 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQL 85 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEE
Confidence 45777899999999999999864 233 6899988655433334578899999999999999999999887 78899
Q ss_pred EEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 374 VYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 374 v~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
++||+++|+|.+++..... .+++.....++.|++.|++|||+. +|+||||||+||++++++.++++||
T Consensus 86 v~e~~~~g~L~~~l~~~~~---~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kL~df 153 (279)
T cd05057 86 ITQLMPLGCLLDYVRNHKD---NIGSQYLLNWCVQIAKGMSYLEEK---RLVHRDLAARNVLVKTPQHVKITDF 153 (279)
T ss_pred EEecCCCCcHHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHhC---CEEecccCcceEEEcCCCeEEECCC
Confidence 9999999999999976432 388999999999999999999998 9999999999999999999999997
No 171
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=99.87 E-value=8.4e-22 Score=190.96 Aligned_cols=146 Identities=29% Similarity=0.388 Sum_probs=126.0
Q ss_pred HhcCCCCCCccCccCCceEEEEEeC------CCCEEEEEEcccccccccHHHHHHHHHHHhcC-CCCCccceeeEEecCC
Q 013004 297 ATDGFSNKNILGRGGFGKVYKGRLA------DGKLVAVKRLKEERTSGGELQFQTEVKIISMA-VHRNLLRLYGFCTTVT 369 (451)
Q Consensus 297 ~~~~f~~~~~lG~G~fg~Vy~~~~~------~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~ 369 (451)
..++|...+.||+|+||.||+|... ++..||||.++..........+.+|+.+++++ +|+||+++++++...+
T Consensus 33 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 112 (302)
T cd05055 33 PRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGG 112 (302)
T ss_pred cHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCC
Confidence 3456888899999999999999741 24579999986543333344689999999999 7999999999999999
Q ss_pred eeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 370 EKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 370 ~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
..+++|||+.+|+|.++++.... ..+++.+...++.|++.||+|||+. +|+||||||+|||+++++.++++||
T Consensus 113 ~~~lv~e~~~~~~L~~~i~~~~~--~~l~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~df 185 (302)
T cd05055 113 PILVITEYCCYGDLLNFLRRKRE--SFLTLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNVLLTHGKIVKICDF 185 (302)
T ss_pred ceEEEEEcCCCCcHHHHHHhCCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeehhhhccceEEEcCCCeEEECCC
Confidence 99999999999999999976432 2379999999999999999999998 9999999999999999999999997
No 172
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=99.87 E-value=4.1e-22 Score=205.60 Aligned_cols=148 Identities=20% Similarity=0.240 Sum_probs=125.5
Q ss_pred HhcCCCCCCccCccCCceEEEEEe-CCCCEEEEEEcccccc-cccHHHHHHHHHHHhcCCCCCccceeeEEecCC-----
Q 013004 297 ATDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERT-SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVT----- 369 (451)
Q Consensus 297 ~~~~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~----- 369 (451)
..++|...+.||+|+||+||+|+. .+++.||||.+..... ......+.+|+..+..++|+||+++++.+...+
T Consensus 30 ~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~ 109 (496)
T PTZ00283 30 QAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPE 109 (496)
T ss_pred cCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcc
Confidence 345788889999999999999985 4689999999865432 223346889999999999999999988765432
Q ss_pred ---eeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchh
Q 013004 370 ---EKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKT 446 (451)
Q Consensus 370 ---~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~d 446 (451)
..++||||+++|+|.+++.........+++..+..++.|++.||.|||+. +|+||||||+|||+++++.+||+|
T Consensus 110 ~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~---~IiHrDLKP~NILl~~~~~vkL~D 186 (496)
T PTZ00283 110 NVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSK---HMIHRDIKSANILLCSNGLVKLGD 186 (496)
T ss_pred cceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEeCCCCEEEEe
Confidence 36899999999999999976544445688999999999999999999998 999999999999999999999999
Q ss_pred h
Q 013004 447 I 447 (451)
Q Consensus 447 f 447 (451)
|
T Consensus 187 F 187 (496)
T PTZ00283 187 F 187 (496)
T ss_pred c
Confidence 8
No 173
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=99.87 E-value=9.6e-22 Score=192.98 Aligned_cols=134 Identities=25% Similarity=0.284 Sum_probs=114.2
Q ss_pred cCccCCceEEEEEeC-CCCEEEEEEccccccc--ccHHHHHHHHHHHhcC---CCCCccceeeEEecCCeeeEEEecCCC
Q 013004 307 LGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS--GGELQFQTEVKIISMA---VHRNLLRLYGFCTTVTEKLLVYPYMTN 380 (451)
Q Consensus 307 lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~--~~~~~~~~E~~~l~~l---~H~niv~l~~~~~~~~~~~lv~ey~~~ 380 (451)
||+|+||+||+|+.. +++.||||++...... .....+..|..++... +||||+++++++.+.+..++||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 699999999999864 5899999998543211 1222455666666554 699999999999999999999999999
Q ss_pred CChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 381 GSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 381 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.++++||
T Consensus 81 g~L~~~l~~~~----~~~~~~~~~~~~qil~al~~LH~~---~ivHrDlkp~Nili~~~~~~kl~Df 140 (330)
T cd05586 81 GELFWHLQKEG----RFSEDRAKFYIAELVLALEHLHKY---DIVYRDLKPENILLDATGHIALCDF 140 (330)
T ss_pred ChHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEecC
Confidence 99999987643 388999999999999999999999 9999999999999999999999998
No 174
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.87 E-value=8.9e-22 Score=194.19 Aligned_cols=143 Identities=25% Similarity=0.352 Sum_probs=126.2
Q ss_pred hcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccc--cHHHHHHHHHHHhcCC-CCCccceeeEEecCCeeeE
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSG--GELQFQTEVKIISMAV-HRNLLRLYGFCTTVTEKLL 373 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~--~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~l 373 (451)
.+.|+..+.||+|.||.||+++.+ +|+.+|+|.+++..... ......+|+.+|+.+. |||||.+++++.+....++
T Consensus 34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~l 113 (382)
T KOG0032|consen 34 KEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYL 113 (382)
T ss_pred cccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEE
Confidence 445777789999999999999875 49999999996654322 2347899999999999 9999999999999999999
Q ss_pred EEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCC----CCccchhhh
Q 013004 374 VYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDED----ADQSSKTIL 448 (451)
Q Consensus 374 v~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~----~~~~i~df~ 448 (451)
|||++.||.|++.+... .+++.++..++.|++.|+.|+|+. +|+|||+||+|+|+... +..+++||-
T Consensus 114 vmEL~~GGeLfd~i~~~-----~~sE~da~~~~~~il~av~~lH~~---gvvHrDlKpEN~L~~~~~~~~~~ik~~DFG 184 (382)
T KOG0032|consen 114 VMELCEGGELFDRIVKK-----HYSERDAAGIIRQILEAVKYLHSL---GVVHRDLKPENLLLASKDEGSGRIKLIDFG 184 (382)
T ss_pred EEEecCCchHHHHHHHc-----cCCHHHHHHHHHHHHHHHHHHHhC---CceeccCCHHHeeeccccCCCCcEEEeeCC
Confidence 99999999999999876 288999999999999999999998 99999999999999865 368999984
No 175
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=99.87 E-value=1.8e-21 Score=185.19 Aligned_cols=143 Identities=28% Similarity=0.426 Sum_probs=117.9
Q ss_pred CCCCccCccCCceEEEEEeCC-CC--EEEEEEccccccc-ccHHHHHHHHHHHhcCCCCCccceeeEEecC------Cee
Q 013004 302 SNKNILGRGGFGKVYKGRLAD-GK--LVAVKRLKEERTS-GGELQFQTEVKIISMAVHRNLLRLYGFCTTV------TEK 371 (451)
Q Consensus 302 ~~~~~lG~G~fg~Vy~~~~~~-~~--~vAvK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~------~~~ 371 (451)
...+.||+|+||.||+|++.+ +. .||+|.++..... .....+.+|+.++..++|+||+++++++... ...
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 81 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSP 81 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCc
Confidence 456789999999999998754 33 5899988654322 2234688999999999999999999987532 246
Q ss_pred eEEEecCCCCChhHHhhccC--CCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 372 LLVYPYMTNGSVASRLRERQ--SSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 372 ~lv~ey~~~gsL~~~l~~~~--~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
++++||+++|+|.+++.... .....++|.....++.|++.||+|||+. +|+||||||+|||+++++.++++||
T Consensus 82 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Df 156 (272)
T cd05075 82 VVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSK---SFIHRDLAARNCMLNENMNVCVADF 156 (272)
T ss_pred EEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhheEEcCCCCEEECCC
Confidence 89999999999998875332 1123478999999999999999999998 9999999999999999999999998
No 176
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=99.87 E-value=1.1e-21 Score=188.49 Aligned_cols=142 Identities=28% Similarity=0.379 Sum_probs=123.2
Q ss_pred CCCCCccCccCCceEEEEEe-CCCCEEEEEEccccccc--ccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEec
Q 013004 301 FSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTS--GGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 377 (451)
Q Consensus 301 f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey 377 (451)
|+..+.||+|+||+||+|.. .+++.||+|.+...... .....+.+|+.++..++|+||+++.+++...+..+++|||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence 55568899999999999986 46889999998653322 1223578899999999999999999999999999999999
Q ss_pred CCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 378 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 378 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+++|+|.+++..... ..+++..+..++.|++.||.|||+. +|+||||||+||++++++.++++||
T Consensus 82 ~~~~~L~~~~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~---~iiH~dikp~Nili~~~~~~kl~Df 146 (285)
T cd05632 82 MNGGDLKFHIYNMGN--PGFEEERALFYAAEILCGLEDLHRE---NTVYRDLKPENILLDDYGHIRISDL 146 (285)
T ss_pred ccCccHHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEECCCCCEEEecC
Confidence 999999988865432 2489999999999999999999998 9999999999999999999999997
No 177
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=99.87 E-value=1.1e-21 Score=187.62 Aligned_cols=148 Identities=31% Similarity=0.413 Sum_probs=126.0
Q ss_pred HhcCCCCCCccCccCCceEEEEEeC------CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCe
Q 013004 297 ATDGFSNKNILGRGGFGKVYKGRLA------DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTE 370 (451)
Q Consensus 297 ~~~~f~~~~~lG~G~fg~Vy~~~~~------~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 370 (451)
..++|+..+.||+|+||.||+|.+. .+..||+|.++..........|.+|+.+++.++|+||+++++++.+...
T Consensus 4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (277)
T cd05036 4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLP 83 (277)
T ss_pred CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCC
Confidence 3466888899999999999999874 3567999988654433334568999999999999999999999999889
Q ss_pred eeEEEecCCCCChhHHhhccCC---CCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCC---Cccc
Q 013004 371 KLLVYPYMTNGSVASRLRERQS---SLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDA---DQSS 444 (451)
Q Consensus 371 ~~lv~ey~~~gsL~~~l~~~~~---~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~---~~~i 444 (451)
.+++|||+++|+|.+++..... ....++|..+..++.|++.|++|||+. +++||||||+||++++++ .+++
T Consensus 84 ~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~nil~~~~~~~~~~kl 160 (277)
T cd05036 84 RFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN---HFIHRDIAARNCLLTCKGPGRVAKI 160 (277)
T ss_pred cEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchheEEEeccCCCcceEe
Confidence 9999999999999999876532 123589999999999999999999998 999999999999999765 4788
Q ss_pred hhh
Q 013004 445 KTI 447 (451)
Q Consensus 445 ~df 447 (451)
+||
T Consensus 161 ~df 163 (277)
T cd05036 161 ADF 163 (277)
T ss_pred ccC
Confidence 887
No 178
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=99.87 E-value=1e-21 Score=187.64 Aligned_cols=135 Identities=26% Similarity=0.359 Sum_probs=112.6
Q ss_pred ccCccCCceEEEEEeCC-------------------------CCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccc
Q 013004 306 ILGRGGFGKVYKGRLAD-------------------------GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLR 360 (451)
Q Consensus 306 ~lG~G~fg~Vy~~~~~~-------------------------~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~ 360 (451)
.||+|+||.||+|.... ...||+|.+..... .....|.+|+.+++.++||||++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~-~~~~~~~~~~~~~~~l~h~niv~ 80 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHR-DIALAFFETASLMSQVSHIHLAF 80 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHH-HHHHHHHHHHHHHhcCCCCCeee
Confidence 58999999999997421 13588998854322 22346888999999999999999
Q ss_pred eeeEEecCCeeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCC
Q 013004 361 LYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDA 440 (451)
Q Consensus 361 l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~ 440 (451)
+++++.+....++||||+++|+|..++..... .+++..+..++.|+++||+|||+. +|+||||||+|||++.++
T Consensus 81 ~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~Nill~~~~ 154 (274)
T cd05076 81 VHGVCVRGSENIMVEEFVEHGPLDVCLRKEKG---RVPVAWKITVAQQLASALSYLEDK---NLVHGNVCAKNILLARLG 154 (274)
T ss_pred EEEEEEeCCceEEEEecCCCCcHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHcC---CccCCCCCcccEEEeccC
Confidence 99999999999999999999999999875432 478999999999999999999998 999999999999998654
Q ss_pred C-------ccchhh
Q 013004 441 D-------QSSKTI 447 (451)
Q Consensus 441 ~-------~~i~df 447 (451)
. .+++||
T Consensus 155 ~~~~~~~~~kl~d~ 168 (274)
T cd05076 155 LAEGTSPFIKLSDP 168 (274)
T ss_pred cccCccceeeecCC
Confidence 2 577775
No 179
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=99.87 E-value=1.2e-21 Score=188.42 Aligned_cols=142 Identities=25% Similarity=0.479 Sum_probs=124.7
Q ss_pred cCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEec
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 377 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey 377 (451)
++|+..+.||+|+||.||+|+.+ +++.||+|.+...........+.+|+.+++.++|+||+++++++.+.+..++||||
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY 84 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence 56788899999999999999875 68899999986543333334577899999999999999999999999999999999
Q ss_pred CCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 378 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 378 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+.+ +|.+++..... .+++.....++.|+++||.|||+. +|+||||||+||++++++.++++||
T Consensus 85 ~~~-~L~~~~~~~~~---~~~~~~~~~~~~ql~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~df 147 (291)
T cd07844 85 LDT-DLKQYMDDCGG---GLSMHNVRLFLFQLLRGLAYCHQR---RVLHRDLKPQNLLISERGELKLADF 147 (291)
T ss_pred CCC-CHHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCHHHEEEcCCCCEEECcc
Confidence 984 99998876432 478999999999999999999998 9999999999999999999999998
No 180
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=99.87 E-value=9.8e-22 Score=186.53 Aligned_cols=146 Identities=20% Similarity=0.316 Sum_probs=126.6
Q ss_pred cCCCCCCccCccCCceEEEEEe-CCCCEEEEEEccccccc--ccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEE
Q 013004 299 DGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTS--GGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 375 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (451)
++|+..+.||+|+||.||+|+. .+++.+|||.++..... ....++.+|+.++..++|+||+++++++...+..+++|
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 4677788999999999999985 57899999987543221 12346889999999999999999999999999999999
Q ss_pred ecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 376 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 376 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
||+++++|.+++.........++|.....++.|++.||.|||+. +++|+||||+||+++.++.++++||
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~df 150 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDL 150 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEECcc
Confidence 99999999998875333334589999999999999999999998 9999999999999999999999997
No 181
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=99.87 E-value=1.6e-21 Score=185.03 Aligned_cols=141 Identities=26% Similarity=0.471 Sum_probs=124.6
Q ss_pred CCCCCCccCccCCceEEEEEeCCCCEEEEEEccccccc-----ccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEE
Q 013004 300 GFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTS-----GGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLV 374 (451)
Q Consensus 300 ~f~~~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~-----~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 374 (451)
+|+..+.||+|+||+||+|...+++.+|+|.++..... .....+.+|+++++.++|+||+++++++.+.+..+++
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence 46778899999999999999888999999988643221 1123588999999999999999999999999999999
Q ss_pred EecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 375 YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 375 ~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+||+++++|.+++.... .+++.....++.|++.||+|||+. +|+|+||||+||++++++.++++||
T Consensus 81 ~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~df 146 (265)
T cd06631 81 MEFVPGGSISSILNRFG----PLPEPVFCKYTKQILDGVAYLHNN---CVVHRDIKGNNVMLMPNGIIKLIDF 146 (265)
T ss_pred EecCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHhEEECCCCeEEeccc
Confidence 99999999999997643 378899999999999999999998 8999999999999999999999997
No 182
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=99.87 E-value=1.7e-21 Score=184.69 Aligned_cols=142 Identities=27% Similarity=0.436 Sum_probs=123.0
Q ss_pred hcCCCCCCccCccCCceEEEEEeCCCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEec
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 377 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey 377 (451)
.++|...+.||+|+||.||+|++.++..||+|.++.... ....|.+|+.++..++|+||+++++++. ....+++|||
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~--~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~ 81 (262)
T cd05071 5 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM--SPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEY 81 (262)
T ss_pred hHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCcc--CHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEEc
Confidence 345778889999999999999987767899999865322 2346899999999999999999999874 4567999999
Q ss_pred CCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 378 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 378 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+++|+|.+++..... ..++|..+..++.|++.||+|+|+. +|+||||||+||++++++.++++||
T Consensus 82 ~~~~~L~~~~~~~~~--~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~Nill~~~~~~~L~df 146 (262)
T cd05071 82 MSKGSLLDFLKGEMG--KYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADF 146 (262)
T ss_pred CCCCcHHHHHhhccc--cCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcccEEEcCCCcEEeccC
Confidence 999999999976422 2478999999999999999999998 9999999999999999999999997
No 183
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=99.87 E-value=1.7e-21 Score=187.43 Aligned_cols=145 Identities=28% Similarity=0.475 Sum_probs=124.9
Q ss_pred cCCCCCCccCccCCceEEEEEeC------CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeee
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA------DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKL 372 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~------~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 372 (451)
++|...+.||+|+||+||++... ++..+|+|.+.... ......+.+|++++.+++||||+++++++...+..+
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 83 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS-DNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLI 83 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcC-HHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccE
Confidence 56788899999999999999742 24568999886432 223346899999999999999999999999999999
Q ss_pred EEEecCCCCChhHHhhccCC---------CCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCcc
Q 013004 373 LVYPYMTNGSVASRLRERQS---------SLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQS 443 (451)
Q Consensus 373 lv~ey~~~gsL~~~l~~~~~---------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~ 443 (451)
+++||+++++|.+++..... ....+++.+...++.|++.||+|||+. +++||||||+||++++++.++
T Consensus 84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~---~i~H~dlkp~Nili~~~~~~k 160 (288)
T cd05093 84 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVK 160 (288)
T ss_pred EEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccCCcEE
Confidence 99999999999999975421 223489999999999999999999998 999999999999999999999
Q ss_pred chhh
Q 013004 444 SKTI 447 (451)
Q Consensus 444 i~df 447 (451)
++||
T Consensus 161 l~df 164 (288)
T cd05093 161 IGDF 164 (288)
T ss_pred eccC
Confidence 9997
No 184
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=99.87 E-value=1.8e-21 Score=184.18 Aligned_cols=142 Identities=28% Similarity=0.456 Sum_probs=124.3
Q ss_pred hcCCCCCCccCccCCceEEEEEeCCCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEec
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 377 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey 377 (451)
.++|+..+.||+|+||.||+|...++..||+|.++.... ....+.+|+.++++++|+|++++++++. ....+++|||
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~--~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~ 81 (260)
T cd05070 5 RESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM--SPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEY 81 (260)
T ss_pred hHHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC--CHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEe
Confidence 456778899999999999999988888899999865332 2346899999999999999999999875 4568999999
Q ss_pred CCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 378 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 378 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+++++|.+++..... ..+++.++..++.|++.||.|||+. +|+||||||+||++++++.++++||
T Consensus 82 ~~~~~L~~~~~~~~~--~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~Nili~~~~~~~l~df 146 (260)
T cd05070 82 MSKGSLLDFLKDGEG--RALKLPNLVDMAAQVAAGMAYIERM---NYIHRDLRSANILVGDGLVCKIADF 146 (260)
T ss_pred cCCCcHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEEeCCceEEeCCc
Confidence 999999999976432 2479999999999999999999998 9999999999999999999999997
No 185
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=99.87 E-value=1.6e-21 Score=186.72 Aligned_cols=138 Identities=25% Similarity=0.368 Sum_probs=121.3
Q ss_pred cCCCCCCccCccCCceEEEEEe-CCCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEec
Q 013004 299 DGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 377 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey 377 (451)
++|+..++||+|+||.||+|+. .+++.||+|.+..........++.+|+.+++.++||||+++++++...+..++||||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 80 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEF 80 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEec
Confidence 3577788999999999999985 468899999986543333345688999999999999999999999999999999999
Q ss_pred CCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 378 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 378 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+++|+|..+. .+++.....++.|++.||.|||+. +|+|+||||+||+++.++.++++||
T Consensus 81 ~~~~~l~~~~--------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nill~~~~~~~l~df 139 (279)
T cd06619 81 MDGGSLDVYR--------KIPEHVLGRIAVAVVKGLTYLWSL---KILHRDVKPSNMLVNTRGQVKLCDF 139 (279)
T ss_pred CCCCChHHhh--------cCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCCHHHEEECCCCCEEEeeC
Confidence 9999986542 267888899999999999999998 9999999999999999999999998
No 186
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=99.86 E-value=2.2e-21 Score=184.57 Aligned_cols=144 Identities=29% Similarity=0.445 Sum_probs=121.1
Q ss_pred CCCCCccCccCCceEEEEEeCC----CCEEEEEEccccccc-ccHHHHHHHHHHHhcCCCCCccceeeEEecCCe-----
Q 013004 301 FSNKNILGRGGFGKVYKGRLAD----GKLVAVKRLKEERTS-GGELQFQTEVKIISMAVHRNLLRLYGFCTTVTE----- 370 (451)
Q Consensus 301 f~~~~~lG~G~fg~Vy~~~~~~----~~~vAvK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~----- 370 (451)
|+..+.||+|+||.||+|.... +..||+|+++..... .....+.+|+..++.++|+||+++++++.....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 4567889999999999998642 367999998754322 223478999999999999999999998876544
Q ss_pred -eeEEEecCCCCChhHHhhccCC--CCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 371 -KLLVYPYMTNGSVASRLRERQS--SLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 371 -~~lv~ey~~~gsL~~~l~~~~~--~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
.++++||+++|+|.+++..... ....+++.....++.|++.||+|||+. +|+||||||+||++++++.++++||
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~df 157 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNR---NFIHRDLAARNCMLREDMTVCVADF 157 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchheEEECCCCeEEECCc
Confidence 7999999999999999865421 123589999999999999999999998 9999999999999999999999997
No 187
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.86 E-value=3e-22 Score=183.72 Aligned_cols=144 Identities=25% Similarity=0.390 Sum_probs=124.8
Q ss_pred HHHHHHHhcCCCCCCccCccCCceEEEEE-eCCCCEEEEEEcccccccccHHHHHHHHHHHhcCC-CCCccceeeEEecC
Q 013004 291 LRELQVATDGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLKEERTSGGELQFQTEVKIISMAV-HRNLLRLYGFCTTV 368 (451)
Q Consensus 291 ~~~~~~~~~~f~~~~~lG~G~fg~Vy~~~-~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~ 368 (451)
+.+...-++ +.||+|+|+.|..+. ..+|..+|||++.+... ....+..+|++++...+ |+||++|+++|.+.
T Consensus 75 F~d~YkLt~-----e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~g-HsR~RvfREVe~f~~Cqgh~nilqLiefFEdd 148 (463)
T KOG0607|consen 75 FEDMYKLTS-----ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPG-HSRSRVFREVETFYQCQGHKNILQLIEFFEDD 148 (463)
T ss_pred HHHHHHhHH-----HHhcCccceeeeeeeeeccchhhhhhhhhcCCc-hHHHHHHHHHHHHHHhcCCccHHHHHHHhccc
Confidence 455555555 779999999999987 67899999999966532 22346789999998876 99999999999999
Q ss_pred CeeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCC---CCccch
Q 013004 369 TEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDED---ADQSSK 445 (451)
Q Consensus 369 ~~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~---~~~~i~ 445 (451)
+..|+|||-|.||.|..+++++.. +++.++.+++.+||.||.|||.+ +|.|||+||+|||..+- ..+||+
T Consensus 149 ~~FYLVfEKm~GGplLshI~~~~~----F~E~EAs~vvkdia~aLdFlH~k---gIAHRDlKPENiLC~~pn~vsPvKiC 221 (463)
T KOG0607|consen 149 TRFYLVFEKMRGGPLLSHIQKRKH----FNEREASRVVKDIASALDFLHTK---GIAHRDLKPENILCESPNKVSPVKIC 221 (463)
T ss_pred ceEEEEEecccCchHHHHHHHhhh----ccHHHHHHHHHHHHHHHHHHhhc---CcccccCCccceeecCCCCcCceeee
Confidence 999999999999999999998754 89999999999999999999999 99999999999999864 357888
Q ss_pred hh
Q 013004 446 TI 447 (451)
Q Consensus 446 df 447 (451)
||
T Consensus 222 Df 223 (463)
T KOG0607|consen 222 DF 223 (463)
T ss_pred cc
Confidence 87
No 188
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=99.86 E-value=1.6e-22 Score=179.67 Aligned_cols=148 Identities=28% Similarity=0.354 Sum_probs=129.2
Q ss_pred hcCCCCCCccCccCCceEEEEE-eCCCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEec-----CCee
Q 013004 298 TDGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTT-----VTEK 371 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~-~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~-----~~~~ 371 (451)
.++|...+.+|+|+|+.||.++ ..+++.+|+|++.... .++....++|++..++++||||++++++... ..+.
T Consensus 20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~-~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~ 98 (302)
T KOG2345|consen 20 NKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHS-QEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEA 98 (302)
T ss_pred CceEEEeeeecCCCceeeeeecccCcccchhhheeeccc-hHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeE
Confidence 4567778999999999999998 5788999999986543 3344578999999999999999999987643 3458
Q ss_pred eEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 372 LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 372 ~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|++++|+..|+|.+.+.........+++.+.+.|+.++++||++||+. .|+.+||||||.|||+.+++.+.+.||
T Consensus 99 yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~D~ 173 (302)
T KOG2345|consen 99 YLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLMDL 173 (302)
T ss_pred EEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEEec
Confidence 999999999999999987766556789999999999999999999998 567999999999999999999999997
No 189
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.86 E-value=9.5e-22 Score=188.46 Aligned_cols=145 Identities=25% Similarity=0.385 Sum_probs=122.7
Q ss_pred CCCCCCccCccCCceEEEEEeC------CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeE
Q 013004 300 GFSNKNILGRGGFGKVYKGRLA------DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLL 373 (451)
Q Consensus 300 ~f~~~~~lG~G~fg~Vy~~~~~------~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 373 (451)
+|...+.||+|+||.||+|... +++.||+|+++..........+.+|+.++..++||||+++++++.+....++
T Consensus 6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~ 85 (283)
T cd05091 6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSM 85 (283)
T ss_pred HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEE
Confidence 3555678999999999999853 2478999999754332223468899999999999999999999999999999
Q ss_pred EEecCCCCChhHHhhccC------------CCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCC
Q 013004 374 VYPYMTNGSVASRLRERQ------------SSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441 (451)
Q Consensus 374 v~ey~~~gsL~~~l~~~~------------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~ 441 (451)
++||+.+++|.+++.... .....+++..+..++.|++.||+|+|+. +|+||||||+||++++++.
T Consensus 86 ~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~ 162 (283)
T cd05091 86 IFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH---HVVHKDLATRNVLVFDKLN 162 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc---CccccccchhheEecCCCc
Confidence 999999999999986321 1123478889999999999999999998 9999999999999999999
Q ss_pred ccchhh
Q 013004 442 QSSKTI 447 (451)
Q Consensus 442 ~~i~df 447 (451)
+|++||
T Consensus 163 ~kl~Df 168 (283)
T cd05091 163 VKISDL 168 (283)
T ss_pred eEeccc
Confidence 999998
No 190
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.86 E-value=1.3e-21 Score=187.35 Aligned_cols=146 Identities=24% Similarity=0.343 Sum_probs=122.1
Q ss_pred cCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHH-HhcCCCCCccceeeEEecCCeeeEEEe
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKI-ISMAVHRNLLRLYGFCTTVTEKLLVYP 376 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~-l~~l~H~niv~l~~~~~~~~~~~lv~e 376 (451)
++|+..+.||+|+||.||+|+.. +|+.||+|+++.........++..|... ++..+||||+++++++...+..+++||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e 80 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME 80 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence 46788899999999999999864 6899999998654333333455666664 566789999999999999999999999
Q ss_pred cCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 377 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 377 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|++ |+|.+++.........+++..+..++.|++.||+|||+++ +++||||||+||+++.++.+||+||
T Consensus 81 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--~i~h~dlkp~nil~~~~~~~kl~df 148 (283)
T cd06617 81 VMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKL--SVIHRDVKPSNVLINRNGQVKLCDF 148 (283)
T ss_pred hhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeec
Confidence 997 6888888654333346899999999999999999999742 7999999999999999999999998
No 191
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.86 E-value=1.1e-21 Score=209.32 Aligned_cols=142 Identities=31% Similarity=0.412 Sum_probs=125.7
Q ss_pred cCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccc--cHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEE
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSG--GELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 375 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (451)
++|...+.||+|+||+||+|+.. +++.||||+++...... ....+.+|+.++..++|+||+++++++......++||
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm 83 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM 83 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence 56888899999999999999975 68899999986533221 2246889999999999999999999999999999999
Q ss_pred ecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 376 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 376 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
||+.+++|.+++.... .+++..+..++.|++.||.|||.. +|+||||||+|||++.++.++|+||
T Consensus 84 Ey~~g~~L~~li~~~~----~l~~~~~~~i~~qil~aL~yLH~~---gIiHrDLKP~NILl~~~g~vkL~DF 148 (669)
T cd05610 84 EYLIGGDVKSLLHIYG----YFDEEMAVKYISEVALALDYLHRH---GIIHRDLKPDNMLISNEGHIKLTDF 148 (669)
T ss_pred eCCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCccHHHEEEcCCCCEEEEeC
Confidence 9999999999997643 378899999999999999999998 9999999999999999999999998
No 192
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.86 E-value=1.3e-21 Score=192.41 Aligned_cols=146 Identities=29% Similarity=0.447 Sum_probs=124.7
Q ss_pred cCCCCCCccCccCCceEEEEEeCC--------CCEEEEEEcccccccccHHHHHHHHHHHhcC-CCCCccceeeEEecCC
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLAD--------GKLVAVKRLKEERTSGGELQFQTEVKIISMA-VHRNLLRLYGFCTTVT 369 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~~--------~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~ 369 (451)
.+|+..+.||+|+||.||+|+... +..||+|.++.........++.+|+.++.++ +||||+++++++...+
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 91 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCC
Confidence 457788999999999999997421 2368999886543333345789999999999 7999999999999999
Q ss_pred eeeEEEecCCCCChhHHhhccCC------------CCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeC
Q 013004 370 EKLLVYPYMTNGSVASRLRERQS------------SLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLD 437 (451)
Q Consensus 370 ~~~lv~ey~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld 437 (451)
..++++||+++|+|.+++..... ....++|.++..++.|++.||.|||+. +|+||||||+||+++
T Consensus 92 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~Nill~ 168 (334)
T cd05100 92 PLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ---KCIHRDLAARNVLVT 168 (334)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEc
Confidence 99999999999999999976421 123478999999999999999999998 999999999999999
Q ss_pred CCCCccchhh
Q 013004 438 EDADQSSKTI 447 (451)
Q Consensus 438 ~~~~~~i~df 447 (451)
+++.++++||
T Consensus 169 ~~~~~kL~Df 178 (334)
T cd05100 169 EDNVMKIADF 178 (334)
T ss_pred CCCcEEECCc
Confidence 9999999997
No 193
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=99.86 E-value=1.7e-21 Score=183.85 Aligned_cols=134 Identities=27% Similarity=0.445 Sum_probs=115.2
Q ss_pred CccCccCCceEEEEEeCC-C----------CEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeE
Q 013004 305 NILGRGGFGKVYKGRLAD-G----------KLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLL 373 (451)
Q Consensus 305 ~~lG~G~fg~Vy~~~~~~-~----------~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 373 (451)
+.||+|+||.||+|...+ + ..|++|.++..... ...|.+|+.+++.++||||+++++++.. ...++
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~--~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~l 77 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD--SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIM 77 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh--HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEE
Confidence 468999999999998754 2 25788876543222 4578999999999999999999999988 77899
Q ss_pred EEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCC-------Cccchh
Q 013004 374 VYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDA-------DQSSKT 446 (451)
Q Consensus 374 v~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~-------~~~i~d 446 (451)
|+||+++|+|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++ .++++|
T Consensus 78 v~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dlkp~Nill~~~~~~~~~~~~~kl~D 151 (259)
T cd05037 78 VEEYVKFGPLDVFLHREKN---NVSLHWKLDVAKQLASALHYLEDK---KLVHGNVCGKNILVARYGLNEGYVPFIKLSD 151 (259)
T ss_pred EEEcCCCCcHHHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHhhC---CeecccCccceEEEecCccccCCceeEEeCC
Confidence 9999999999999986542 478999999999999999999998 999999999999999887 688888
Q ss_pred h
Q 013004 447 I 447 (451)
Q Consensus 447 f 447 (451)
|
T Consensus 152 f 152 (259)
T cd05037 152 P 152 (259)
T ss_pred C
Confidence 6
No 194
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=99.86 E-value=1.7e-21 Score=187.29 Aligned_cols=142 Identities=27% Similarity=0.384 Sum_probs=123.2
Q ss_pred CCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccc--cHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEec
Q 013004 301 FSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSG--GELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 377 (451)
Q Consensus 301 f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey 377 (451)
|+..+.||+|+||.||++... +++.||||.+....... ....+.+|+.++..++|++|+++++.+.+.+..++||||
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 81 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence 566788999999999999864 68899999986533222 223577899999999999999999999999999999999
Q ss_pred CCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 378 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 378 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+++|+|.+++..... ..+++..+..++.|++.||.|||+. +|+||||||+||++++++.++++||
T Consensus 82 ~~g~~L~~~l~~~~~--~~l~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nil~~~~~~~~l~Df 146 (285)
T cd05630 82 MNGGDLKFHIYHMGE--AGFEEGRAVFYAAEICCGLEDLHQE---RIVYRDLKPENILLDDHGHIRISDL 146 (285)
T ss_pred cCCCcHHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeec
Confidence 999999998865432 2488999999999999999999998 9999999999999999999999997
No 195
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=99.86 E-value=3.6e-22 Score=200.63 Aligned_cols=140 Identities=29% Similarity=0.440 Sum_probs=118.9
Q ss_pred CCccCccCCceEEEEE-eCCCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCC------eeeEEEe
Q 013004 304 KNILGRGGFGKVYKGR-LADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVT------EKLLVYP 376 (451)
Q Consensus 304 ~~~lG~G~fg~Vy~~~-~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~------~~~lv~e 376 (451)
.+.||+|+||.||+|+ ..+|+.||||.++............+|+++|++++|+|||++++.-.+.. ...+|||
T Consensus 18 ~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlvmE 97 (732)
T KOG4250|consen 18 DERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLVME 97 (732)
T ss_pred hhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEEEe
Confidence 4679999999999999 46799999999987665555667899999999999999999998765433 4689999
Q ss_pred cCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCC--CC--Cccchhh
Q 013004 377 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDE--DA--DQSSKTI 447 (451)
Q Consensus 377 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~--~~--~~~i~df 447 (451)
||.+|||+..|.+.... ..+++.+.+.+..+++.||.|||++ +|+||||||.||++-. || .-|+.||
T Consensus 98 yC~gGsL~~~L~~PEN~-~GLpE~e~l~lL~d~~~al~~LrEn---~IvHRDlKP~NIvl~~Gedgq~IyKLtDf 168 (732)
T KOG4250|consen 98 YCSGGSLRKVLNSPENA-YGLPESEFLDLLSDLVSALRHLREN---GIVHRDLKPGNIVLQIGEDGQSIYKLTDF 168 (732)
T ss_pred ecCCCcHHHHhcCcccc-cCCCHHHHHHHHHHHHHHHHHHHHc---CceeccCCCCcEEEeecCCCceEEeeecc
Confidence 99999999999875332 3489999999999999999999999 9999999999999864 33 2377776
No 196
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=99.86 E-value=2.5e-21 Score=182.60 Aligned_cols=143 Identities=17% Similarity=0.308 Sum_probs=125.1
Q ss_pred CCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEecC
Q 013004 300 GFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYM 378 (451)
Q Consensus 300 ~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~ 378 (451)
+|+..+.||+|+||.||+++.. +++.+|+|.++..........+.+|+.+++.++|+||+++++++...+..++++||+
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC 80 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence 4667789999999999999864 688999999864433333456888999999999999999999999999999999999
Q ss_pred CCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 379 TNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 379 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
++|+|.+++..... ..+++.....++.|++.||.|||+. +|+|+||||+||++++++.++++||
T Consensus 81 ~~~~l~~~~~~~~~--~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dl~p~nili~~~~~~~l~df 144 (255)
T cd08219 81 DGGDLMQKIKLQRG--KLFPEDTILQWFVQMCLGVQHIHEK---RVLHRDIKSKNIFLTQNGKVKLGDF 144 (255)
T ss_pred CCCcHHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEECCCCcEEEccc
Confidence 99999998875432 2478899999999999999999998 9999999999999999999999997
No 197
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.86 E-value=7.3e-22 Score=200.28 Aligned_cols=140 Identities=30% Similarity=0.467 Sum_probs=123.8
Q ss_pred CCCCccCccCCceEEEEEe-CCC----CEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEe
Q 013004 302 SNKNILGRGGFGKVYKGRL-ADG----KLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 376 (451)
Q Consensus 302 ~~~~~lG~G~fg~Vy~~~~-~~~----~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 376 (451)
...++||+|+||+||+|.| +.| .+||+|++......+...++++|+..|+.++|||+++++|+|.... ..+|++
T Consensus 699 kk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq 777 (1177)
T KOG1025|consen 699 KKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQ 777 (1177)
T ss_pred hhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHH
Confidence 3457899999999999975 444 4799999877666666678999999999999999999999998766 889999
Q ss_pred cCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhhh
Q 013004 377 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 448 (451)
Q Consensus 377 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df~ 448 (451)
||+.|.|.++++..+. .+--...+.+..|||+||.|||.+ +++||||.++|||+.+-..+||.||.
T Consensus 778 ~mP~G~LlDyvr~hr~---~igsq~lLnw~~QIAkgM~YLe~q---rlVHrdLaaRNVLVksP~hvkitdfg 843 (1177)
T KOG1025|consen 778 LMPLGCLLDYVREHRD---NIGSQDLLNWCYQIAKGMKYLEEQ---RLVHRDLAARNVLVKSPNHVKITDFG 843 (1177)
T ss_pred hcccchHHHHHHHhhc---cccHHHHHHHHHHHHHHHHHHHhc---chhhhhhhhhheeecCCCeEEEEecc
Confidence 9999999999998654 366678889999999999999999 99999999999999999999999984
No 198
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=99.86 E-value=6.1e-22 Score=195.49 Aligned_cols=146 Identities=27% Similarity=0.434 Sum_probs=129.5
Q ss_pred HHHhcCCCCCCccCccCCceEEEEEeCC---C--CEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCC
Q 013004 295 QVATDGFSNKNILGRGGFGKVYKGRLAD---G--KLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVT 369 (451)
Q Consensus 295 ~~~~~~f~~~~~lG~G~fg~Vy~~~~~~---~--~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~ 369 (451)
...++..+..+.||+|-||.||+|.+.+ | -.||||..+.+...+....|+.|+.+|+.++|||||+++|+|.+ .
T Consensus 385 el~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e-~ 463 (974)
T KOG4257|consen 385 ELRRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE-Q 463 (974)
T ss_pred eeehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec-c
Confidence 3444556667899999999999998633 2 35999999988777777789999999999999999999999976 4
Q ss_pred eeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 370 EKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 370 ~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
..|+|||.++-|.|.++|+.... .++......++.|++.||+|||+. ++|||||..+|||+.+...+|++||
T Consensus 464 P~WivmEL~~~GELr~yLq~nk~---sL~l~tL~ly~~Qi~talaYLeSk---rfVHRDIAaRNiLVsSp~CVKLaDF 535 (974)
T KOG4257|consen 464 PMWIVMELAPLGELREYLQQNKD---SLPLRTLTLYCYQICTALAYLESK---RFVHRDIAARNILVSSPQCVKLADF 535 (974)
T ss_pred ceeEEEecccchhHHHHHHhccc---cchHHHHHHHHHHHHHHHHHHHhh---chhhhhhhhhheeecCcceeeeccc
Confidence 58999999999999999988755 388889999999999999999999 9999999999999999999999998
No 199
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.86 E-value=1.8e-22 Score=199.03 Aligned_cols=149 Identities=28% Similarity=0.409 Sum_probs=131.6
Q ss_pred HHHHHHhcCCCCCCccCccCCceEEEEEeCC-CCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCe
Q 013004 292 RELQVATDGFSNKNILGRGGFGKVYKGRLAD-GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTE 370 (451)
Q Consensus 292 ~~~~~~~~~f~~~~~lG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 370 (451)
++++....+....+.||-|.||.||.|.|+. .-.||||.++.+.. ...+|+.|+.+|+.++|||+|+|+|+|.....
T Consensus 260 DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtM--eveEFLkEAAvMKeikHpNLVqLLGVCT~EpP 337 (1157)
T KOG4278|consen 260 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPP 337 (1157)
T ss_pred chhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcch--hHHHHHHHHHHHHhhcCccHHHHhhhhccCCC
Confidence 4455555667778999999999999999864 67899999976542 35589999999999999999999999999999
Q ss_pred eeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 371 KLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 371 ~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
.|+|+|||..|+|.++|++..... ++--..+++|.||+.||+||..+ ++|||||.++|+|+.++..+||+||
T Consensus 338 FYIiTEfM~yGNLLdYLRecnr~e--v~avvLlyMAtQIsSaMeYLEkk---nFIHRDLAARNCLVgEnhiVKvADF 409 (1157)
T KOG4278|consen 338 FYIITEFMCYGNLLDYLRECNRSE--VPAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHIVKVADF 409 (1157)
T ss_pred eEEEEecccCccHHHHHHHhchhh--cchhHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhccccccceEEeecc
Confidence 999999999999999999876543 56667789999999999999998 9999999999999999999999998
No 200
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.86 E-value=1.3e-21 Score=187.70 Aligned_cols=146 Identities=25% Similarity=0.376 Sum_probs=126.2
Q ss_pred cCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEec
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 377 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey 377 (451)
++|+..+.||+|+||.||+++.. +++.||+|.++..........+.+|+.++..++|+||+++++++...+..++|+||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEY 80 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEee
Confidence 35777899999999999999875 68999999886543333334788999999999999999999999999999999999
Q ss_pred CCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 378 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 378 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+++++|.+++.... ....+++.....++.|++.||.|||+.+ +|+||||||+||+++.++.++++||
T Consensus 81 ~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~df 147 (286)
T cd06622 81 MDAGSLDKLYAGGV-ATEGIPEDVLRRITYAVVKGLKFLKEEH--NIIHRDVKPTNVLVNGNGQVKLCDF 147 (286)
T ss_pred cCCCCHHHHHHhcc-ccCCCCHHHHHHHHHHHHHHHHHHHhcC--CEeeCCCCHHHEEECCCCCEEEeec
Confidence 99999998887532 1224899999999999999999999632 8999999999999999999999997
No 201
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=99.86 E-value=2.9e-21 Score=181.96 Aligned_cols=143 Identities=24% Similarity=0.367 Sum_probs=125.6
Q ss_pred CCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccc-cccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEec
Q 013004 300 GFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT-SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 377 (451)
Q Consensus 300 ~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey 377 (451)
+|+..+.||+|+||.||+|... +++.||+|.+..... ......+.+|+.+++.++||||+++++++.+.+..++++||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY 80 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence 4677789999999999999864 688999999864322 22344788999999999999999999999999999999999
Q ss_pred CCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 378 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 378 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+++++|.+++..... ..+++.....++.|++.||.|||+. +++||||||+||++++++.++++||
T Consensus 81 ~~~~~L~~~l~~~~~--~~~~~~~~~~i~~~l~~al~~lH~~---~i~h~dl~~~nili~~~~~~~l~df 145 (256)
T cd08529 81 AENGDLHKLLKMQRG--RPLPEDQVWRFFIQILLGLAHLHSK---KILHRDIKSLNLFLDAYDNVKIGDL 145 (256)
T ss_pred CCCCcHHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEeCCCCEEEccc
Confidence 999999999986422 3488999999999999999999998 9999999999999999999999997
No 202
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=99.86 E-value=3.7e-21 Score=181.35 Aligned_cols=140 Identities=34% Similarity=0.545 Sum_probs=123.7
Q ss_pred CccCccCCceEEEEEeCC----CCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEecCCC
Q 013004 305 NILGRGGFGKVYKGRLAD----GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTN 380 (451)
Q Consensus 305 ~~lG~G~fg~Vy~~~~~~----~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~ 380 (451)
+.||+|+||.||+|.... +..||+|.++..........+.+|+..+..++|+||+++++++......+++|||+++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG 80 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence 469999999999998753 7889999997654433345789999999999999999999999999999999999999
Q ss_pred CChhHHhhccCCC-----CCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 381 GSVASRLRERQSS-----LPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 381 gsL~~~l~~~~~~-----~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
++|.+++...... ...+++.+...++.|++.||+|||+. +++||||||+||++++++.++++||
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~nili~~~~~~~l~df 149 (262)
T cd00192 81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK---KFVHRDLAARNCLVGEDLVVKISDF 149 (262)
T ss_pred CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcC---CcccCccCcceEEECCCCcEEEccc
Confidence 9999999875211 23589999999999999999999998 9999999999999999999999997
No 203
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=99.86 E-value=3.1e-21 Score=184.87 Aligned_cols=142 Identities=23% Similarity=0.372 Sum_probs=123.9
Q ss_pred cCCCCCCccCccCCceEEEEEeC-CCCEEEEEEccccccc-ccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEe
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS-GGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 376 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 376 (451)
++|+..+.||+|+||.||+|+.+ +++.||+|++...... .....+.+|+.++..++|+|++++++++......++|||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e 80 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE 80 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence 35778889999999999999975 5889999988643322 223457899999999999999999999999999999999
Q ss_pred cCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 377 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 377 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|++++++..+..... .++|..+..++.|++.||+|||+. +++||||||+||+++.++.++++||
T Consensus 81 ~~~~~~l~~~~~~~~----~~~~~~~~~~~~ql~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~~l~df 144 (286)
T cd07847 81 YCDHTVLNELEKNPR----GVPEHLIKKIIWQTLQAVNFCHKH---NCIHRDVKPENILITKQGQIKLCDF 144 (286)
T ss_pred ccCccHHHHHHhCCC----CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCChhhEEEcCCCcEEECcc
Confidence 999988887765432 389999999999999999999998 9999999999999999999999998
No 204
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=99.86 E-value=2.3e-21 Score=186.58 Aligned_cols=143 Identities=25% Similarity=0.398 Sum_probs=123.5
Q ss_pred hcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEe
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 376 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 376 (451)
+++|...+.||+|+||.||+|... +++.||+|.++..........+.+|+.+++.++|+||+++++++...+..++|+|
T Consensus 4 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e 83 (291)
T cd07870 4 ATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFE 83 (291)
T ss_pred cceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEe
Confidence 467888899999999999999864 6889999998654433333467899999999999999999999999999999999
Q ss_pred cCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 377 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 377 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|+. +++.+++..... .+.+.....++.|++.||.|||+. +|+||||||+||+++.++.++++||
T Consensus 84 ~~~-~~l~~~~~~~~~---~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Df 147 (291)
T cd07870 84 YMH-TDLAQYMIQHPG---GLHPYNVRLFMFQLLRGLAYIHGQ---HILHRDLKPQNLLISYLGELKLADF 147 (291)
T ss_pred ccc-CCHHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEEcCCCcEEEecc
Confidence 996 688777754322 367888899999999999999998 9999999999999999999999998
No 205
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=99.86 E-value=2.4e-21 Score=186.49 Aligned_cols=142 Identities=30% Similarity=0.412 Sum_probs=125.5
Q ss_pred cCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccc--cccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEE
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 375 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (451)
++|+..+.||+|+||.||++... +++.||+|.++.... ......+.+|+++++.++||||+++++++......+++|
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 35777899999999999999864 589999999864322 122346889999999999999999999999999999999
Q ss_pred ecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 376 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 376 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
||+++++|.+++.... .+++..+..++.|++.||.|||+. +|+||||+|+||++++++.++++||
T Consensus 81 e~~~~~~L~~~~~~~~----~l~~~~~~~~~~qil~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~df 145 (290)
T cd05580 81 EYVPGGELFSHLRKSG----RFPEPVARFYAAQVVLALEYLHSL---DIVYRDLKPENLLLDSDGYIKITDF 145 (290)
T ss_pred ecCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEeeC
Confidence 9999999999997653 388999999999999999999998 9999999999999999999999987
No 206
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=99.86 E-value=3.7e-21 Score=184.36 Aligned_cols=143 Identities=21% Similarity=0.374 Sum_probs=123.6
Q ss_pred CCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccc-cHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEec
Q 013004 300 GFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 377 (451)
Q Consensus 300 ~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey 377 (451)
+|+..+.||+|+||.||+|+.. +++.||||.++...... ....+.+|+.++..++||||+++++++...+..++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence 4677789999999999999864 68899999986543222 234688999999999999999999999999999999999
Q ss_pred CCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 378 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 378 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
++ ++|.+++..... ...+++..+..++.|++.||.|||+. +|+||||||+||++++++.++++||
T Consensus 81 ~~-~~l~~~~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~~l~df 145 (285)
T cd07861 81 LS-MDLKKYLDSLPK-GQYMDAELVKSYLYQILQGILFCHSR---RVLHRDLKPQNLLIDNKGVIKLADF 145 (285)
T ss_pred CC-CCHHHHHhcCCC-CCcCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEEcCCCcEEECcc
Confidence 97 688888865432 23588999999999999999999998 9999999999999999999999998
No 207
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=99.86 E-value=3.3e-21 Score=184.38 Aligned_cols=143 Identities=26% Similarity=0.429 Sum_probs=124.2
Q ss_pred cCCCCCCccCccCCceEEEEEeC-----CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEec--CCee
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA-----DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTT--VTEK 371 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~-----~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~--~~~~ 371 (451)
++|+..+.||+|+||.||+|++. +++.||||.++..........|.+|+.+++.++|+||+++++++.. ....
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL 83 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence 35667788999999999999853 3678999998754332234579999999999999999999999877 5578
Q ss_pred eEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 372 LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 372 ~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+++|||+++++|.+++..... .++|.....++.|++.||+|||+. +++||||||+||+++.++.++++||
T Consensus 84 ~lv~e~~~~~~l~~~l~~~~~---~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~df 153 (284)
T cd05038 84 RLIMEYLPSGSLRDYLQRHRD---QINLKRLLLFSSQICKGMDYLGSQ---RYIHRDLAARNILVESEDLVKISDF 153 (284)
T ss_pred EEEEecCCCCCHHHHHHhCcc---ccCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEccc
Confidence 999999999999999976532 489999999999999999999998 9999999999999999999999997
No 208
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.86 E-value=1.7e-21 Score=186.95 Aligned_cols=153 Identities=26% Similarity=0.353 Sum_probs=127.9
Q ss_pred cHHHHHHHhcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHHHhcC-CCCCccceeeEEe-
Q 013004 290 SLRELQVATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMA-VHRNLLRLYGFCT- 366 (451)
Q Consensus 290 ~~~~~~~~~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~- 366 (451)
.++.+....++|+..+.||+|+||.||+|... +++.+|+|.++... ....++.+|+.++..+ +||||+++++++.
T Consensus 9 ~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~--~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 86 (286)
T cd06638 9 IFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH--DIDEEIEAEYNILKALSDHPNVVKFYGMYYK 86 (286)
T ss_pred EeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc--chHHHHHHHHHHHHHHhcCCCeeeeeeeeee
Confidence 34455667888999999999999999999864 57899999875422 2234678899999998 6999999999874
Q ss_pred ----cCCeeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCc
Q 013004 367 ----TVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQ 442 (451)
Q Consensus 367 ----~~~~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~ 442 (451)
..+..+++|||+++|+|.+++.........+++..+..++.|++.||.|||+. +|+||||||+||++++++.+
T Consensus 87 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~ 163 (286)
T cd06638 87 KDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVN---KTIHRDVKGNNILLTTEGGV 163 (286)
T ss_pred cccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhC---CccccCCCHHhEEECCCCCE
Confidence 34568999999999999998864332233578899999999999999999998 99999999999999999999
Q ss_pred cchhh
Q 013004 443 SSKTI 447 (451)
Q Consensus 443 ~i~df 447 (451)
+++||
T Consensus 164 kl~df 168 (286)
T cd06638 164 KLVDF 168 (286)
T ss_pred EEccC
Confidence 99997
No 209
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=99.86 E-value=3.9e-21 Score=181.88 Aligned_cols=142 Identities=27% Similarity=0.445 Sum_probs=124.9
Q ss_pred cCCCCCCccCccCCceEEEEEe-CCCCEEEEEEcccccccc----cHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeE
Q 013004 299 DGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSG----GELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLL 373 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~~----~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 373 (451)
++|+..+.||+|+||.||+|.. .+++.||+|.++...... ....+.+|+.++..++||||+++++++...+..++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 4688889999999999999986 468999999886432211 12368899999999999999999999999999999
Q ss_pred EEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 374 VYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 374 v~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
++||+++++|.+.+.... .+++.....++.|++.||.|||+. +|+||||||+||++++++.++++||
T Consensus 82 v~e~~~~~~l~~~~~~~~----~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nilv~~~~~~~l~df 148 (263)
T cd06625 82 FMEYMPGGSVKDQLKAYG----ALTETVTRKYTRQILEGVEYLHSN---MIVHRDIKGANILRDSAGNVKLGDF 148 (263)
T ss_pred EEEECCCCcHHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeec
Confidence 999999999999987643 378889999999999999999998 9999999999999999999999997
No 210
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=99.86 E-value=4.1e-21 Score=181.13 Aligned_cols=143 Identities=22% Similarity=0.340 Sum_probs=125.6
Q ss_pred CCCCCCccCccCCceEEEEEe-CCCCEEEEEEccccc-ccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEec
Q 013004 300 GFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEER-TSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 377 (451)
Q Consensus 300 ~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey 377 (451)
+|+..++||+|+||.||.++. .+++.+++|.+.... ......++.+|+.++++++|+||+++++++.+.+..+++|||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~ 80 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY 80 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence 467789999999999999985 468899999885432 223345688999999999999999999999999999999999
Q ss_pred CCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 378 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 378 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+++|+|.+++..... ..+++.++..++.|++.|+.|||+. +++||||||+||++++++.+|++||
T Consensus 81 ~~~~~L~~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~ni~~~~~~~~kl~d~ 145 (256)
T cd08221 81 ANGGTLYDKIVRQKG--QLFEEEMVLWYLFQIVSAVSYIHKA---GILHRDIKTLNIFLTKAGLIKLGDF 145 (256)
T ss_pred cCCCcHHHHHHhccc--cCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChHhEEEeCCCCEEECcC
Confidence 999999999976532 3478999999999999999999998 9999999999999999999999997
No 211
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=99.86 E-value=4.9e-21 Score=181.27 Aligned_cols=141 Identities=28% Similarity=0.418 Sum_probs=122.0
Q ss_pred cCCCCCCccCccCCceEEEEEeCCCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEecC
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYM 378 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~ 378 (451)
++|...+.||+|+||.||+|...++..+|+|.+.... .....+.+|+.+++.++|+|++++++++. .+..+++|||+
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~ 82 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT--MMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFM 82 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC--ccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcC
Confidence 4577778899999999999998777789999876432 22346889999999999999999998875 45689999999
Q ss_pred CCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 379 TNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 379 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
++|+|.+++..... ..++|..+..++.|++.||.|||+. +++||||||+||++++++.++++||
T Consensus 83 ~~~~L~~~~~~~~~--~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dl~~~Nill~~~~~~~l~df 146 (260)
T cd05069 83 GKGSLLDFLKEGDG--KYLKLPQLVDMAAQIADGMAYIERM---NYIHRDLRAANILVGDNLVCKIADF 146 (260)
T ss_pred CCCCHHHHHhhCCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCeEEECCC
Confidence 99999999976432 2478999999999999999999998 9999999999999999999999987
No 212
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=99.86 E-value=4.9e-21 Score=180.71 Aligned_cols=140 Identities=29% Similarity=0.456 Sum_probs=122.4
Q ss_pred cCCCCCCccCccCCceEEEEEeCCCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEe-cCCeeeEEEec
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCT-TVTEKLLVYPY 377 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~-~~~~~~lv~ey 377 (451)
++|+..+.||+|+||.||++..+ +..||+|.++... ....+.+|+.+++.++|+|++++++++. .....++++||
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~ 81 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA---TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 81 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCCc---hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEEC
Confidence 46788899999999999999874 7789999885432 2346899999999999999999999765 45568999999
Q ss_pred CCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 378 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 378 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+++|+|.+++..... ..+++.....++.|++.||+|||++ +|+||||||+||++++++.++++||
T Consensus 82 ~~~~~L~~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~df 146 (256)
T cd05082 82 MAKGSLVDYLRSRGR--SVLGGDCLLKFSLDVCEAMEYLEAN---NFVHRDLAARNVLVSEDNVAKVSDF 146 (256)
T ss_pred CCCCcHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CEeccccchheEEEcCCCcEEecCC
Confidence 999999999976533 2478999999999999999999998 9999999999999999999999998
No 213
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=99.86 E-value=2.7e-21 Score=183.02 Aligned_cols=143 Identities=23% Similarity=0.381 Sum_probs=125.4
Q ss_pred HhcCCCCCCccCccCCceEEEEEeCCCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEe
Q 013004 297 ATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 376 (451)
Q Consensus 297 ~~~~f~~~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 376 (451)
..++|...+.||+|+||.||+|...++..+|+|.++... .....+.+|+.+++.++|+||+++++++.+ ...+++||
T Consensus 4 ~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e 80 (260)
T cd05073 4 PRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS--MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITE 80 (260)
T ss_pred cccceeEEeEecCccceEEEEEEecCCccEEEEecCCCh--hHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEE
Confidence 346788889999999999999998777889999886432 223468899999999999999999999887 77899999
Q ss_pred cCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 377 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 377 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|+++|+|.+++..... ..+++.++..++.|++.||.|||+. +++||||||+||+++.++.++++||
T Consensus 81 ~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~ 146 (260)
T cd05073 81 FMAKGSLLDFLKSDEG--SKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADF 146 (260)
T ss_pred eCCCCcHHHHHHhCCc--cccCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCC
Confidence 9999999999976432 3478999999999999999999998 9999999999999999999999997
No 214
>PHA03209 serine/threonine kinase US3; Provisional
Probab=99.86 E-value=3.3e-21 Score=191.28 Aligned_cols=138 Identities=24% Similarity=0.340 Sum_probs=120.9
Q ss_pred HHhcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEE
Q 013004 296 VATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLV 374 (451)
Q Consensus 296 ~~~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 374 (451)
....+|...+.||+|+||.||+|+.. +++.||+|..... ....|+.+++.++|+||+++++++......++|
T Consensus 63 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~-------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 135 (357)
T PHA03209 63 VASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG-------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMV 135 (357)
T ss_pred hhhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc-------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEE
Confidence 34567999999999999999999875 4678999975322 235689999999999999999999999999999
Q ss_pred EecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 375 YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 375 ~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+||+. |+|.+++.... ..++|..+..++.|++.||.|||+. +|+||||||+|||++.++.++++||
T Consensus 136 ~e~~~-~~l~~~l~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kl~Df 201 (357)
T PHA03209 136 LPHYS-SDLYTYLTKRS---RPLPIDQALIIEKQILEGLRYLHAQ---RIIHRDVKTENIFINDVDQVCIGDL 201 (357)
T ss_pred EEccC-CcHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEecC
Confidence 99995 68888886543 2489999999999999999999998 9999999999999999999999998
No 215
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=99.86 E-value=4.8e-21 Score=180.09 Aligned_cols=138 Identities=29% Similarity=0.466 Sum_probs=122.7
Q ss_pred CccCccCCceEEEEEeCCCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEecCCCCChh
Q 013004 305 NILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVA 384 (451)
Q Consensus 305 ~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~gsL~ 384 (451)
+.||+|+||.||+|...+++.||+|.++..........+.+|+.+++.++|+||+++++++......++|+||+++++|.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~ 80 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL 80 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence 46899999999999986699999998865443333457899999999999999999999999999999999999999999
Q ss_pred HHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhhh
Q 013004 385 SRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 448 (451)
Q Consensus 385 ~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df~ 448 (451)
+++..... .+++.....++.+++.|++|||++ +++||||||+||+++.++.++++||-
T Consensus 81 ~~l~~~~~---~~~~~~~~~~~~~~~~~l~~lH~~---~i~h~di~p~nili~~~~~~~l~d~g 138 (251)
T cd05041 81 TFLRKKKN---RLTVKKLLQMSLDAAAGMEYLESK---NCIHRDLAARNCLVGENNVLKISDFG 138 (251)
T ss_pred HHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHhC---CEehhhcCcceEEEcCCCcEEEeecc
Confidence 99976432 478899999999999999999999 99999999999999999999999983
No 216
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.86 E-value=2.3e-21 Score=186.01 Aligned_cols=143 Identities=24% Similarity=0.343 Sum_probs=125.2
Q ss_pred cCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEec
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 377 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey 377 (451)
++|+..+.||+|+||+||+++.. +++.||+|.+...........+.+|++++..++||||+++++++...+..++||||
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF 84 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence 45677788999999999999864 58899999886543333345789999999999999999999999999999999999
Q ss_pred CCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 378 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 378 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+++|+|.+++.... .+++.....++.+++.||.|||+.. +++||||||+||++++++.++++||
T Consensus 85 ~~~~~L~~~~~~~~----~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~d~ 148 (284)
T cd06620 85 MDCGSLDRIYKKGG----PIPVEILGKIAVAVVEGLTYLYNVH--RIMHRDIKPSNILVNSRGQIKLCDF 148 (284)
T ss_pred CCCCCHHHHHHhcc----CCCHHHHHHHHHHHHHHHHHHHHhc--CeeccCCCHHHEEECCCCcEEEccC
Confidence 99999999887643 3889999999999999999999631 7999999999999999999999997
No 217
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=99.86 E-value=4.1e-21 Score=185.42 Aligned_cols=141 Identities=26% Similarity=0.434 Sum_probs=123.6
Q ss_pred CCCCCCccCccCCceEEEEEeC-CCCEEEEEEccccccc---c-cHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEE
Q 013004 300 GFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS---G-GELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLV 374 (451)
Q Consensus 300 ~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~---~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 374 (451)
+|+..+.||+|+||.||+|... +++.||||.++..... . ....+..|+.++..++|+||+++++++.+.+..++|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 3667788999999999999864 6899999998654322 1 123577899999999999999999999999999999
Q ss_pred EecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 375 YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 375 ~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|||+ +|+|.+++.... ..+++..+..++.|+++||.|||+. +|+||||||+||+++.++.++|+||
T Consensus 81 ~e~~-~~~L~~~i~~~~---~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nill~~~~~~~l~df 146 (298)
T cd07841 81 FEFM-ETDLEKVIKDKS---IVLTPADIKSYMLMTLRGLEYLHSN---WILHRDLKPNNLLIASDGVLKLADF 146 (298)
T ss_pred Eccc-CCCHHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCChhhEEEcCCCCEEEccc
Confidence 9999 999999997643 2489999999999999999999999 9999999999999999999999997
No 218
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=99.86 E-value=5.3e-21 Score=180.71 Aligned_cols=134 Identities=25% Similarity=0.388 Sum_probs=115.9
Q ss_pred ccCccCCceEEEEEeC---CCCEEEEEEcccccccc-cHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEecCCCC
Q 013004 306 ILGRGGFGKVYKGRLA---DGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNG 381 (451)
Q Consensus 306 ~lG~G~fg~Vy~~~~~---~~~~vAvK~~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~g 381 (451)
.||+|+||.||+|.++ +++.+|+|+++...... ...++.+|+.+++.++|+||+++++++. .+..++||||+++|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence 5899999999999753 57889999986443222 2346889999999999999999999875 45678999999999
Q ss_pred ChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 382 SVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 382 sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||++++++.++++||
T Consensus 81 ~L~~~l~~~~----~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~nill~~~~~~kl~Df 139 (257)
T cd05116 81 PLNKFLQKNK----HVTEKNITELVHQVSMGMKYLEET---NFVHRDLAARNVLLVTQHYAKISDF 139 (257)
T ss_pred cHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchhhEEEcCCCeEEECCC
Confidence 9999997543 378999999999999999999998 9999999999999999999999997
No 219
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=99.86 E-value=3.9e-21 Score=181.35 Aligned_cols=137 Identities=35% Similarity=0.464 Sum_probs=120.2
Q ss_pred CccCccCCceEEEEEeCC--C--CEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEecCCC
Q 013004 305 NILGRGGFGKVYKGRLAD--G--KLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTN 380 (451)
Q Consensus 305 ~~lG~G~fg~Vy~~~~~~--~--~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~ 380 (451)
+.||+|++|.||+|.+.+ + ..||+|.++..........+.+|+.++++++||||+++++++.. ...++++||+++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~ 79 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL 79 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence 468999999999998643 3 36999999765443334578999999999999999999999888 889999999999
Q ss_pred CChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 381 GSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 381 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|+|.+++..... ..++|.....++.|++.||+|||+. +++||||||+||+++.++.++++||
T Consensus 80 ~~L~~~l~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~di~p~nil~~~~~~~kl~df 141 (257)
T cd05040 80 GSLLDRLRKDAL--GHFLISTLCDYAVQIANGMRYLESK---RFIHRDLAARNILLASDDKVKIGDF 141 (257)
T ss_pred CcHHHHHHhccc--ccCcHHHHHHHHHHHHHHHHHHHhC---CccccccCcccEEEecCCEEEeccc
Confidence 999999987542 3589999999999999999999998 9999999999999999999999997
No 220
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.86 E-value=3.5e-21 Score=186.14 Aligned_cols=140 Identities=23% Similarity=0.370 Sum_probs=125.2
Q ss_pred cCCCCCCccCccCCceEEEEEe-CCCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEec
Q 013004 299 DGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 377 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey 377 (451)
.+|+..+.||+|+||.||+|.. .+++.||+|.+...... ....+.+|+.+++.++|+||+++++++...+..++||||
T Consensus 19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 97 (297)
T cd06656 19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQP-KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 97 (297)
T ss_pred hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccc-hHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeecc
Confidence 5688889999999999999986 46899999998643322 234688999999999999999999999999999999999
Q ss_pred CCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 378 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 378 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+++++|.+++.+. .+++.++..++.|++.||.|||+. +|+||||||+||+++.++.++++||
T Consensus 98 ~~~~~L~~~~~~~-----~~~~~~~~~~~~~l~~~L~~LH~~---~i~H~dL~p~Nili~~~~~~~l~Df 159 (297)
T cd06656 98 LAGGSLTDVVTET-----CMDEGQIAAVCRECLQALDFLHSN---QVIHRDIKSDNILLGMDGSVKLTDF 159 (297)
T ss_pred cCCCCHHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEECcC
Confidence 9999999998653 378899999999999999999998 9999999999999999999999998
No 221
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.86 E-value=2.9e-21 Score=183.60 Aligned_cols=148 Identities=23% Similarity=0.328 Sum_probs=124.6
Q ss_pred HHHhcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeE
Q 013004 295 QVATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLL 373 (451)
Q Consensus 295 ~~~~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 373 (451)
..+++.+.....||+|+||.||+|... ++..||+|.+..... .....+.+|+.+++.++|+||+++++++...+..++
T Consensus 4 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 82 (268)
T cd06624 4 EYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDS-RYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKI 82 (268)
T ss_pred ccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCH-HHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEE
Confidence 345566666788999999999999864 578899998864432 233468999999999999999999999999999999
Q ss_pred EEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCC-CCCccchhh
Q 013004 374 VYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDE-DADQSSKTI 447 (451)
Q Consensus 374 v~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~-~~~~~i~df 447 (451)
++||+++++|.+++...... ...++..+..++.|++.||+|||+. +|+||||||+||+++. ++.++++||
T Consensus 83 v~e~~~~~~L~~~l~~~~~~-~~~~~~~~~~~~~qi~~al~~lH~~---~i~h~dl~p~nil~~~~~~~~~l~df 153 (268)
T cd06624 83 FMEQVPGGSLSALLRSKWGP-LKDNEQTIIFYTKQILEGLKYLHDN---QIVHRDIKGDNVLVNTYSGVVKISDF 153 (268)
T ss_pred EEecCCCCCHHHHHHHhccc-CCCcHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCeEEEecc
Confidence 99999999999999864321 1127888889999999999999998 9999999999999987 568999987
No 222
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=99.86 E-value=9.5e-22 Score=185.55 Aligned_cols=139 Identities=32% Similarity=0.485 Sum_probs=121.1
Q ss_pred CCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccccH-HHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEecCC
Q 013004 302 SNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGE-LQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMT 379 (451)
Q Consensus 302 ~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~-~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~ 379 (451)
+..+.||+|+||+||+++.. +++.||+|.+......... ....+|+..+..++||||+++++++......+++|||++
T Consensus 2 ~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~~ 81 (260)
T PF00069_consen 2 RLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYCP 81 (260)
T ss_dssp EEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEET
T ss_pred EEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccccccccccccccccccccccccccccc
Confidence 44678999999999999975 4678999999655332222 234569999999999999999999999999999999999
Q ss_pred CCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 380 NGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 380 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+++|.+++.... .+++..+..++.|+++||.|||+. +|+||||||+||++++++.++++||
T Consensus 82 ~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~L~~Lh~~---~i~H~dikp~NIl~~~~~~~~l~Df 142 (260)
T PF00069_consen 82 GGSLQDYLQKNK----PLSEEEILKIAYQILEALAYLHSK---GIVHRDIKPENILLDENGEVKLIDF 142 (260)
T ss_dssp TEBHHHHHHHHS----SBBHHHHHHHHHHHHHHHHHHHHT---TEEESSBSGGGEEESTTSEEEESSG
T ss_pred cccccccccccc----cccccccccccccccccccccccc---ccccccccccccccccccccccccc
Confidence 999999998332 389999999999999999999999 9999999999999999999999997
No 223
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=99.86 E-value=5.9e-21 Score=179.91 Aligned_cols=141 Identities=27% Similarity=0.443 Sum_probs=124.2
Q ss_pred CCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccc----cccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEE
Q 013004 300 GFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT----SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLV 374 (451)
Q Consensus 300 ~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~----~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 374 (451)
+|+..+.||+|+||+||+|... +++.||+|.+..... .+....+.+|+.+++.++|+||+++++++......+++
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 3666789999999999999875 789999998854321 11234688999999999999999999999999999999
Q ss_pred EecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 375 YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 375 ~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+||+++++|.+++.... .+++.....++.|++.|+.|||+. +|+|+||||+||+++.++.++++||
T Consensus 81 ~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~~~ni~~~~~~~~kl~d~ 146 (258)
T cd06632 81 LELVPGGSLAKLLKKYG----SFPEPVIRLYTRQILLGLEYLHDR---NTVHRDIKGANILVDTNGVVKLADF 146 (258)
T ss_pred EEecCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccC
Confidence 99999999999997643 378999999999999999999998 9999999999999999999999998
No 224
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.86 E-value=2.4e-22 Score=197.17 Aligned_cols=140 Identities=31% Similarity=0.448 Sum_probs=119.6
Q ss_pred CCCCCccCccCCceEEEEEe-CCCCEEEEEEccccccccc--HHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEec
Q 013004 301 FSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGG--ELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 377 (451)
Q Consensus 301 f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey 377 (451)
|+..+.||.|+||.||-|+. ++.+.||||++.-...... ..++..|+..+..++|||+|.+.|+|......|+||||
T Consensus 28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEY 107 (948)
T KOG0577|consen 28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEY 107 (948)
T ss_pred HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHH
Confidence 55668899999999999986 5678999999854332222 23689999999999999999999999999999999999
Q ss_pred CCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 378 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 378 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|-| |-.+.+.-... ++.+.+...|+.|++.||+|||++ +.||||||+.|||+.+.|.+|++||
T Consensus 108 ClG-SAsDlleVhkK---plqEvEIAAi~~gaL~gLaYLHS~---~~IHRDiKAGNILLse~g~VKLaDF 170 (948)
T KOG0577|consen 108 CLG-SASDLLEVHKK---PLQEVEIAAITHGALQGLAYLHSH---NRIHRDIKAGNILLSEPGLVKLADF 170 (948)
T ss_pred Hhc-cHHHHHHHHhc---cchHHHHHHHHHHHHHHHHHHHHh---hHHhhhccccceEecCCCeeeeccc
Confidence 965 66666554332 477888899999999999999999 9999999999999999999999998
No 225
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=99.86 E-value=3.7e-21 Score=183.04 Aligned_cols=143 Identities=24% Similarity=0.347 Sum_probs=122.3
Q ss_pred hcCCCCCCccCccCCceEEEEEeCC----CCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeE
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLAD----GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLL 373 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~~----~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 373 (451)
.++|+..+.||+|+||.||+|.+.+ ...||||.............+.+|+.+++.++||||+++++++.. ...++
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~l 83 (270)
T cd05056 5 REDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWI 83 (270)
T ss_pred hhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEE
Confidence 3457778899999999999998643 246899988654333334578999999999999999999998865 55789
Q ss_pred EEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 374 VYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 374 v~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+|||+++|+|.+++..... .+++..+..++.|++.||+|||+. +++||||||+||+++.++.++++||
T Consensus 84 v~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~~l~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~ 151 (270)
T cd05056 84 VMELAPLGELRSYLQVNKY---SLDLASLILYSYQLSTALAYLESK---RFVHRDIAARNVLVSSPDCVKLGDF 151 (270)
T ss_pred EEEcCCCCcHHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeccccChheEEEecCCCeEEccC
Confidence 9999999999999976432 479999999999999999999998 9999999999999999999999997
No 226
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=99.85 E-value=5e-21 Score=181.63 Aligned_cols=136 Identities=26% Similarity=0.396 Sum_probs=113.5
Q ss_pred CccCccCCceEEEEEeCC-------------CCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCee
Q 013004 305 NILGRGGFGKVYKGRLAD-------------GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEK 371 (451)
Q Consensus 305 ~~lG~G~fg~Vy~~~~~~-------------~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 371 (451)
+.||+|+||.||+|...+ ...||+|.+.... ......|.+|+.++..++||||+++++++......
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~-~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~ 79 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSH-RDISLAFFETASMMRQVSHKHIVLLYGVCVRDVEN 79 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhh-hhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCC
Confidence 358999999999997532 2258888875432 22234688899999999999999999999999999
Q ss_pred eEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCC-------ccc
Q 013004 372 LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDAD-------QSS 444 (451)
Q Consensus 372 ~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~-------~~i 444 (451)
+++|||+++|+|..++..... .+++.....++.|+++||+|||+. +|+||||||+|||++.++. +++
T Consensus 80 ~lv~e~~~~~~l~~~~~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~~~~~~~~~l 153 (262)
T cd05077 80 IMVEEFVEFGPLDLFMHRKSD---VLTTPWKFKVAKQLASALSYLEDK---DLVHGNVCTKNILLAREGIDGECGPFIKL 153 (262)
T ss_pred EEEEecccCCCHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHhhhC---CeECCCCCcccEEEecCCccCCCCceeEe
Confidence 999999999999988865432 488999999999999999999998 9999999999999987664 567
Q ss_pred hhh
Q 013004 445 KTI 447 (451)
Q Consensus 445 ~df 447 (451)
+||
T Consensus 154 ~d~ 156 (262)
T cd05077 154 SDP 156 (262)
T ss_pred CCC
Confidence 665
No 227
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=99.85 E-value=2.9e-21 Score=184.83 Aligned_cols=143 Identities=31% Similarity=0.444 Sum_probs=126.4
Q ss_pred hcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEe
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 376 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 376 (451)
.++|+..+.||+|+||.||+|... +++.||+|.++... ......|.+|+.+++.++|+||+++++++......++|||
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIES-EEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIE 82 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCC-HHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEee
Confidence 456778889999999999999874 58899999986432 2233468899999999999999999999999999999999
Q ss_pred cCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 377 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 377 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|+++++|.+++..... .+++..+..++.|++.||.|||+. +|+||||||+||+++.++..+++||
T Consensus 83 ~~~~~~L~~~~~~~~~---~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~nili~~~~~~~l~d~ 147 (280)
T cd06611 83 FCDGGALDSIMLELER---GLTEPQIRYVCRQMLEALNFLHSH---KVIHRDLKAGNILLTLDGDVKLADF 147 (280)
T ss_pred ccCCCcHHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEECCCCCEEEccC
Confidence 9999999999876432 489999999999999999999999 9999999999999999999999997
No 228
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=99.85 E-value=6e-21 Score=180.62 Aligned_cols=137 Identities=32% Similarity=0.481 Sum_probs=115.4
Q ss_pred CccCccCCceEEEEEeCC----CCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEec-CCeeeEEEecCC
Q 013004 305 NILGRGGFGKVYKGRLAD----GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTT-VTEKLLVYPYMT 379 (451)
Q Consensus 305 ~~lG~G~fg~Vy~~~~~~----~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~-~~~~~lv~ey~~ 379 (451)
+.||+|+||.||+|...+ +..||+|.+...........+.+|+.+++.++||||+++++++.. .+..++++||+.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 80 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK 80 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence 468999999999998532 357999988543322234578899999999999999999998764 456789999999
Q ss_pred CCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 380 NGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 380 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+|+|.+++..... ..++.....++.|++.|+.|||+. +++||||||+|||+++++.++++||
T Consensus 81 ~~~L~~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlk~~nili~~~~~~kl~df 142 (262)
T cd05058 81 HGDLRNFIRSETH---NPTVKDLIGFGLQVAKGMEYLASK---KFVHRDLAARNCMLDESFTVKVADF 142 (262)
T ss_pred CCCHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCc
Confidence 9999999976432 367888889999999999999998 9999999999999999999999997
No 229
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.85 E-value=4.7e-21 Score=185.91 Aligned_cols=142 Identities=21% Similarity=0.337 Sum_probs=124.9
Q ss_pred cCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccc--cccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEE
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 375 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (451)
++|+..+.||+|+||.||+++.. +++.||+|.+..... ......+.+|+.++..++||||+++++.+...+..++||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 36788899999999999999864 578999998865432 122346789999999999999999999999999999999
Q ss_pred ecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 376 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 376 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
||+++|+|.+++.... .+++.....++.|++.||.|||+. +++||||||+||+++.++.++++||
T Consensus 81 e~~~g~~L~~~l~~~~----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~NIll~~~~~~~l~df 145 (305)
T cd05609 81 EYVEGGDCATLLKNIG----ALPVDMARMYFAETVLALEYLHNY---GIVHRDLKPDNLLITSMGHIKLTDF 145 (305)
T ss_pred ecCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHEEECCCCCEEEeeC
Confidence 9999999999997643 378999999999999999999998 9999999999999999999999997
No 230
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=99.85 E-value=4.8e-21 Score=181.73 Aligned_cols=142 Identities=27% Similarity=0.432 Sum_probs=121.7
Q ss_pred cCCCCCCccCccCCceEEEEEeC-CCCEEEEEEccccccc----ccHHHHHHHHHHHhcCCCCCccceeeEEecC--Cee
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS----GGELQFQTEVKIISMAVHRNLLRLYGFCTTV--TEK 371 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~----~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~ 371 (451)
++|+..+.||+|+||.||+|+.. +++.||||.+...... .....+.+|+.+++.++||||+++++++.+. ...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 46788899999999999999864 5889999988543211 1123678899999999999999999988764 457
Q ss_pred eEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 372 LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 372 ~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
++++||+++|+|.+++.... .+++.....++.|++.||+|||+. +|+|+||||+||+++.++.++++||
T Consensus 82 ~~v~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~Df 150 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSYG----ALTENVTRKYTRQILEGVSYLHSN---MIVHRDIKGANILRDSVGNVKLGDF 150 (265)
T ss_pred EEEEEecCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEecCCCCEEECcC
Confidence 89999999999999987543 378888999999999999999998 9999999999999999999999998
No 231
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=99.85 E-value=4.9e-21 Score=184.43 Aligned_cols=145 Identities=28% Similarity=0.465 Sum_probs=123.8
Q ss_pred cCCCCCCccCccCCceEEEEEeC------CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeee
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA------DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKL 372 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~------~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 372 (451)
.+|...+.||+|+||.||+|+.. ++..+|+|.++.... .....+.+|++.++.++|+||+++++++...+..+
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 83 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTL-AARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLI 83 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccH-HHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceE
Confidence 35677789999999999999742 345689998854322 22346889999999999999999999999999999
Q ss_pred EEEecCCCCChhHHhhccCC------------CCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCC
Q 013004 373 LVYPYMTNGSVASRLRERQS------------SLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDA 440 (451)
Q Consensus 373 lv~ey~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~ 440 (451)
+||||+++++|.+++..... ....++|..+..++.|++.|++|||++ +|+||||||+||++++++
T Consensus 84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Nil~~~~~ 160 (291)
T cd05094 84 MVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNCLVGANL 160 (291)
T ss_pred EEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccCC
Confidence 99999999999999975421 113479999999999999999999999 999999999999999999
Q ss_pred Cccchhh
Q 013004 441 DQSSKTI 447 (451)
Q Consensus 441 ~~~i~df 447 (451)
.++++||
T Consensus 161 ~~~l~df 167 (291)
T cd05094 161 LVKIGDF 167 (291)
T ss_pred cEEECCC
Confidence 9999997
No 232
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=99.85 E-value=4.5e-21 Score=185.91 Aligned_cols=143 Identities=28% Similarity=0.491 Sum_probs=121.0
Q ss_pred hcCCCCCCccCccCCceEEEEEeC-CCC----EEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeee
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLA-DGK----LVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKL 372 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~-~~~----~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 372 (451)
.++|+..+.||+|+||.||+|.+. +++ .||+|.+..........++.+|+.+++.++||||+++++++... ..+
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~ 84 (303)
T cd05110 6 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQ 84 (303)
T ss_pred hhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Cce
Confidence 346777889999999999999863 444 47889886543333334688999999999999999999998754 467
Q ss_pred EEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 373 LVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 373 lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+++||+++|+|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+||++++++.+|++||
T Consensus 85 ~v~e~~~~g~l~~~~~~~~~---~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dikp~Nill~~~~~~kL~Df 153 (303)
T cd05110 85 LVTQLMPHGCLLDYVHEHKD---NIGSQLLLNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDF 153 (303)
T ss_pred eeehhcCCCCHHHHHHhccc---CCCHHHHHHHHHHHHHHHHHHhhc---CeeccccccceeeecCCCceEEccc
Confidence 99999999999999876432 378999999999999999999998 9999999999999999999999997
No 233
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=99.85 E-value=5.5e-21 Score=186.30 Aligned_cols=144 Identities=30% Similarity=0.358 Sum_probs=126.1
Q ss_pred cCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccc--cHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEE
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSG--GELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 375 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (451)
++|+..+.||+|+||.||+|... +++.||+|.+....... ....+.+|++++..++|+||+++++++......+++|
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 36778899999999999999875 48999999986543322 3346889999999999999999999999999999999
Q ss_pred ecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 376 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 376 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
||+.+++|.+++..... ..+++.....++.|++.||+|||+. +++||||||+||+++.++.++++||
T Consensus 81 e~~~~~~L~~~~~~~~~--~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~df 147 (316)
T cd05574 81 DYCPGGELFRLLQRQPG--KCLSEEVARFYAAEVLLALEYLHLL---GIVYRDLKPENILLHESGHIMLSDF 147 (316)
T ss_pred EecCCCCHHHHHHhCCC--CccCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChHHeEEcCCCCEEEeec
Confidence 99999999999875422 3488999999999999999999998 9999999999999999999999987
No 234
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.85 E-value=3.2e-21 Score=183.11 Aligned_cols=141 Identities=26% Similarity=0.416 Sum_probs=123.9
Q ss_pred cCCCCCCccCccCCceEEEEEe-CCCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEec
Q 013004 299 DGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 377 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey 377 (451)
++|+..+.||+|+||.||+|+. .+++.||+|.++.... .....+.+|+.++..++||||+++++++...+..++++||
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~ 87 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPG-EDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEF 87 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEec
Confidence 3566678899999999999986 4688999999865422 2233578899999999999999999999999999999999
Q ss_pred CCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 378 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 378 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+++++|.+++.... .+++.+...++.|++.|+.|||+. +++||||||+||+++.++.++++||
T Consensus 88 ~~~~~L~~~~~~~~----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~~l~df 150 (267)
T cd06645 88 CGGGSLQDIYHVTG----PLSESQIAYVSRETLQGLYYLHSK---GKMHRDIKGANILLTDNGHVKLADF 150 (267)
T ss_pred cCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECcc
Confidence 99999999987543 388999999999999999999999 9999999999999999999999987
No 235
>PHA03211 serine/threonine kinase US3; Provisional
Probab=99.85 E-value=3.8e-21 Score=195.80 Aligned_cols=135 Identities=24% Similarity=0.284 Sum_probs=119.6
Q ss_pred cCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEec
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 377 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey 377 (451)
.+|...+.||+|+||.||+|+.. +++.||||.... ..+.+|+++++.++|+|||++++++...+..+++|||
T Consensus 169 ~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~-------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~ 241 (461)
T PHA03211 169 LGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY-------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPK 241 (461)
T ss_pred CCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc-------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEc
Confidence 46888899999999999999875 478999995421 2467899999999999999999999999999999999
Q ss_pred CCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 378 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 378 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+. ++|.+++..... .++|.++..++.|++.||.|||+. +|+||||||+|||++.++.++|+||
T Consensus 242 ~~-~~L~~~l~~~~~---~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDLKP~NILl~~~~~vkL~DF 304 (461)
T PHA03211 242 YR-SDLYTYLGARLR---PLGLAQVTAVARQLLSAIDYIHGE---GIIHRDIKTENVLVNGPEDICLGDF 304 (461)
T ss_pred cC-CCHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHHC---CEEECcCCHHHEEECCCCCEEEccc
Confidence 95 789888865432 489999999999999999999999 9999999999999999999999998
No 236
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=99.85 E-value=7.6e-21 Score=179.55 Aligned_cols=135 Identities=30% Similarity=0.473 Sum_probs=117.7
Q ss_pred CccCccCCceEEEEEeCC----CCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEecCCC
Q 013004 305 NILGRGGFGKVYKGRLAD----GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTN 380 (451)
Q Consensus 305 ~~lG~G~fg~Vy~~~~~~----~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~ 380 (451)
+.||+|+||.||+|.+.. +..+|+|.++.........++.+|+.+++.+.|+||+++++++. .+..+++|||+++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~ 79 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL 79 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence 469999999999997532 26899999875543333457899999999999999999999875 4568999999999
Q ss_pred CChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 381 GSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 381 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|+|.+++.... .+++..+..++.|++.|++|||+. +++||||||+||++++++.++++||
T Consensus 80 ~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~nili~~~~~~kl~df 139 (257)
T cd05060 80 GPLLKYLKKRR----EIPVSDLKELAHQVAMGMAYLESK---HFVHRDLAARNVLLVNRHQAKISDF 139 (257)
T ss_pred CcHHHHHHhCC----CCCHHHHHHHHHHHHHHHHHHhhc---CeeccCcccceEEEcCCCcEEeccc
Confidence 99999997653 489999999999999999999998 9999999999999999999999998
No 237
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.85 E-value=4.7e-21 Score=185.18 Aligned_cols=140 Identities=22% Similarity=0.370 Sum_probs=124.5
Q ss_pred cCCCCCCccCccCCceEEEEEe-CCCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEec
Q 013004 299 DGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 377 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey 377 (451)
.+|+..+.||+|+||.||+|+. .+++.||+|.+...... ....+.+|+.+++.++|+||+++++++......++||||
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~-~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~ 98 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP-KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcc-hHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeecc
Confidence 4677788999999999999985 46889999988654322 234688999999999999999999999999999999999
Q ss_pred CCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 378 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 378 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+++++|.+++... .+++.+...++.|++.||+|||+. +|+||||||+||+++.++.++++||
T Consensus 99 ~~~~~L~~~~~~~-----~~~~~~~~~i~~ql~~aL~~LH~~---gi~H~dLkp~Nill~~~~~~kl~df 160 (296)
T cd06654 99 LAGGSLTDVVTET-----CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDF 160 (296)
T ss_pred cCCCCHHHHHHhc-----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEECcc
Confidence 9999999998643 378999999999999999999998 9999999999999999999999998
No 238
>PTZ00036 glycogen synthase kinase; Provisional
Probab=99.85 E-value=3e-21 Score=196.61 Aligned_cols=141 Identities=23% Similarity=0.336 Sum_probs=115.5
Q ss_pred hcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecC--------
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTV-------- 368 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-------- 368 (451)
..+|+..+.||+|+||.||+|... +++.||||++.... ....+|+.+++.++|||||++++++...
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~-----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~ 139 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP-----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKN 139 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc-----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCc
Confidence 456888899999999999999864 68899999874321 2345799999999999999999876432
Q ss_pred CeeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCC-Cccchhh
Q 013004 369 TEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDA-DQSSKTI 447 (451)
Q Consensus 369 ~~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~-~~~i~df 447 (451)
...++||||+++ ++.+++.........+++.....++.|++.||+|||+. +|+||||||+|||++.++ .+||+||
T Consensus 140 ~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~---~IiHrDLKp~NILl~~~~~~vkL~DF 215 (440)
T PTZ00036 140 IFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSK---FICHRDLKPQNLLIDPNTHTLKLCDF 215 (440)
T ss_pred eEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCcCHHHEEEcCCCCceeeecc
Confidence 236789999985 77777654322234588999999999999999999999 999999999999999765 7999997
No 239
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=99.85 E-value=3.5e-21 Score=189.99 Aligned_cols=143 Identities=24% Similarity=0.339 Sum_probs=120.8
Q ss_pred HHhcCCCCCCccCccCCceEEEEEe-CCCCEEEEEEccccccc-ccHHHHHHHHHHHhcCCCCCccceeeEEecC-----
Q 013004 296 VATDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTS-GGELQFQTEVKIISMAVHRNLLRLYGFCTTV----- 368 (451)
Q Consensus 296 ~~~~~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~----- 368 (451)
...++|+..+.||+|+||.||+|.. .+++.||||.++..... .....+.+|+.+++.++||||+++++++...
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07878 12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIEN 91 (343)
T ss_pred hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccc
Confidence 3457788999999999999999986 46889999998643221 2234577899999999999999999887542
Q ss_pred -CeeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 369 -TEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 369 -~~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
...++++|++ +++|.+++... .+++..+..++.|++.||.|||+. +|+||||||+|||+++++.+|++||
T Consensus 92 ~~~~~~~~~~~-~~~l~~~~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Df 162 (343)
T cd07878 92 FNEVYLVTNLM-GADLNNIVKCQ-----KLSDEHVQFLIYQLLRGLKYIHSA---GIIHRDLKPSNVAVNEDCELRILDF 162 (343)
T ss_pred cCcEEEEeecC-CCCHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhhEEECCCCCEEEcCC
Confidence 3568999988 78998877542 388999999999999999999999 9999999999999999999999998
No 240
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.85 E-value=1.1e-21 Score=191.45 Aligned_cols=145 Identities=24% Similarity=0.357 Sum_probs=127.5
Q ss_pred cCCCCCCccCccCCceEEEEEeC-CCCEEEEEEccccccccc-HHHHHHHHHHHhcCCCCCccceeeEEecCCe-eeEEE
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGG-ELQFQTEVKIISMAVHRNLLRLYGFCTTVTE-KLLVY 375 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~-~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~-~~lv~ 375 (451)
++|...+++|+|+||.++..+.+ +++.+++|.+........ ......|+.++++++|||||.+.+.|...+. .++||
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm 83 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM 83 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence 56778899999999999988753 578999999875543333 3367899999999999999999999998888 99999
Q ss_pred ecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhhh
Q 013004 376 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 448 (451)
Q Consensus 376 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df~ 448 (451)
+|++||++.+.+.+.++ ..+++.+...+..|++.|+.|||+. +|+|||||+.||++..++.++++||-
T Consensus 84 ~Y~eGg~l~~~i~~~k~--~~f~E~~i~~~~~Q~~~av~ylH~~---~iLHRDlK~~Nifltk~~~VkLgDfG 151 (426)
T KOG0589|consen 84 EYCEGGDLAQLIKEQKG--VLFPEERILKWFVQILLAVNYLHEN---RVLHRDLKCANIFLTKDKKVKLGDFG 151 (426)
T ss_pred eecCCCCHHHHHHHHhh--ccccHHHHHHHHHHHHHHHHHHHhh---hhhcccchhhhhhccccCceeecchh
Confidence 99999999999988763 3488899999999999999999988 99999999999999999999999984
No 241
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=99.85 E-value=5.9e-21 Score=181.80 Aligned_cols=140 Identities=27% Similarity=0.435 Sum_probs=121.8
Q ss_pred CCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccc---------cHHHHHHHHHHHhcCCCCCccceeeEEecCCe
Q 013004 301 FSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSG---------GELQFQTEVKIISMAVHRNLLRLYGFCTTVTE 370 (451)
Q Consensus 301 f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~---------~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 370 (451)
|...+.||+|+||.||+|... +++.||+|.++...... ....+.+|+.++..++|+|++++++++...+.
T Consensus 3 ~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 82 (272)
T cd06629 3 WVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEEY 82 (272)
T ss_pred eeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCCc
Confidence 556788999999999999854 68899999875321110 11257889999999999999999999999999
Q ss_pred eeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 371 KLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 371 ~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
.++|+||+++|+|.++++... .+++..+..++.|++.||.|||+. +++||||||+||++++++.++++||
T Consensus 83 ~~lv~e~~~~~~L~~~l~~~~----~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~~~nil~~~~~~~~l~d~ 152 (272)
T cd06629 83 LSIFLEYVPGGSIGSCLRTYG----RFEEQLVRFFTEQVLEGLAYLHSK---GILHRDLKADNLLVDADGICKISDF 152 (272)
T ss_pred eEEEEecCCCCcHHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHhhC---CeeecCCChhhEEEcCCCeEEEeec
Confidence 999999999999999997652 488999999999999999999998 9999999999999999999999987
No 242
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=99.85 E-value=2.8e-21 Score=185.34 Aligned_cols=142 Identities=24% Similarity=0.411 Sum_probs=124.2
Q ss_pred cCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccc-cHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEe
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 376 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 376 (451)
++|+..+.||+|+||.||+|... +++.||+|++....... ....+.+|+++++.++||||+++++++...+..++|+|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE 80 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence 35777899999999999999975 58999999986433222 23468899999999999999999999999999999999
Q ss_pred cCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 377 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 377 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|++++++.++..... .++|.+...++.|++.||.|||+. +++||||+|+||++++++.++++||
T Consensus 81 ~~~~~~l~~~~~~~~----~~~~~~~~~~~~~i~~~l~~LH~~---~i~h~~l~p~ni~~~~~~~~~l~df 144 (286)
T cd07846 81 FVDHTVLDDLEKYPN----GLDESRVRKYLFQILRGIEFCHSH---NIIHRDIKPENILVSQSGVVKLCDF 144 (286)
T ss_pred cCCccHHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCcEEEEee
Confidence 999999887765432 389999999999999999999998 9999999999999999999999998
No 243
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=99.85 E-value=2.8e-21 Score=184.66 Aligned_cols=139 Identities=32% Similarity=0.495 Sum_probs=122.4
Q ss_pred CCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEecCC
Q 013004 301 FSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMT 379 (451)
Q Consensus 301 f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~ 379 (451)
|+..+.||+|+||.||+|... +++.||+|.++..........+.+|+.+++.++||||+++++++...+..++|+||++
T Consensus 6 y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 85 (277)
T cd06642 6 FTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLG 85 (277)
T ss_pred HHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEccC
Confidence 445577999999999999864 5789999988644333334468899999999999999999999999999999999999
Q ss_pred CCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 380 NGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 380 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+++|.+++... .+++..+..++.|+++|+.|||+. +++|+||+|+||++++++.+++.||
T Consensus 86 ~~~L~~~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~---~ivH~dl~p~ni~i~~~~~~~l~df 145 (277)
T cd06642 86 GGSALDLLKPG-----PLEETYIATILREILKGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADF 145 (277)
T ss_pred CCcHHHHhhcC-----CCCHHHHHHHHHHHHHHHHHHhcC---CeeccCCChheEEEeCCCCEEEccc
Confidence 99999988642 378999999999999999999998 9999999999999999999999998
No 244
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=99.85 E-value=8.9e-21 Score=178.60 Aligned_cols=142 Identities=34% Similarity=0.527 Sum_probs=124.3
Q ss_pred CCCCCccCccCCceEEEEEeCC-----CCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEE
Q 013004 301 FSNKNILGRGGFGKVYKGRLAD-----GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 375 (451)
Q Consensus 301 f~~~~~lG~G~fg~Vy~~~~~~-----~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (451)
|+..+.||+|+||.||+|+..+ +..||+|.++..........+..|+..+..++|+||+++++++.+.+..+++|
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~ 80 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVM 80 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEE
Confidence 3456889999999999998753 37899999966543334557899999999999999999999999999999999
Q ss_pred ecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 376 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 376 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
||+++++|.+++...... .+++.+...++.|++.|++|||+. +++||||||+||++++++.++++||
T Consensus 81 e~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~ql~~~l~~lh~~---~~~h~dl~~~nil~~~~~~~~l~df 147 (258)
T smart00219 81 EYMEGGDLLDYLRKNRPK--ELSLSDLLSFALQIARGMEYLESK---NFIHRDLAARNCLVGENLVVKISDF 147 (258)
T ss_pred eccCCCCHHHHHHhhhhc--cCCHHHHHHHHHHHHHHHHHHhcC---CeeecccccceEEEccCCeEEEccc
Confidence 999999999999764321 179999999999999999999999 9999999999999999999999997
No 245
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.85 E-value=3.8e-21 Score=190.96 Aligned_cols=141 Identities=23% Similarity=0.292 Sum_probs=118.9
Q ss_pred HhcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEccccccc-ccHHHHHHHHHHHhcCCCCCccceeeEEecCC-----
Q 013004 297 ATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS-GGELQFQTEVKIISMAVHRNLLRLYGFCTTVT----- 369 (451)
Q Consensus 297 ~~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~----- 369 (451)
..++|+..+.||+|+||.||+|+.. +++.||||.++..... .....+.+|+.++..++||||+++++++....
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 98 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF 98 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence 3467888999999999999999864 5889999998643322 23346889999999999999999999886543
Q ss_pred -eeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 370 -EKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 370 -~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
..++||||+.+ ++.+.+.. .+++..+..++.|++.||.|||++ +|+||||||+|||++.++.++|+||
T Consensus 99 ~~~~lv~e~~~~-~l~~~~~~------~~~~~~~~~~~~qi~~~L~~LH~~---~ivHrDlkp~NIl~~~~~~~kl~Df 167 (359)
T cd07876 99 QDVYLVMELMDA-NLCQVIHM------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDF 167 (359)
T ss_pred ceeEEEEeCCCc-CHHHHHhc------cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEecC
Confidence 47999999975 56665543 278888999999999999999999 9999999999999999999999998
No 246
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=99.85 E-value=7.1e-21 Score=179.47 Aligned_cols=141 Identities=28% Similarity=0.500 Sum_probs=125.0
Q ss_pred cCCCCCCccCccCCceEEEEEeCCCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEecC
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYM 378 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~ 378 (451)
.+|+..+.||+|+||.||+|.+.+++.+|+|.++.... ...+|.+|++++..++|||++++++++......++++||+
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 81 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAM--SEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFM 81 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCC--CHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcC
Confidence 35677789999999999999987788999998864322 2346899999999999999999999999989999999999
Q ss_pred CCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 379 TNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 379 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
++++|.+++..... .+++..+..++.|++.|++|||+. +++||||||+||+++.++.++++||
T Consensus 82 ~~~~L~~~~~~~~~---~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~dl~p~ni~i~~~~~~~l~d~ 144 (256)
T cd05112 82 EHGCLSDYLRAQRG---KFSQETLLGMCLDVCEGMAYLESS---NVIHRDLAARNCLVGENQVVKVSDF 144 (256)
T ss_pred CCCcHHHHHHhCcc---CCCHHHHHHHHHHHHHHHHHHHHC---CccccccccceEEEcCCCeEEECCC
Confidence 99999999876432 378999999999999999999998 9999999999999999999999997
No 247
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.85 E-value=6.7e-21 Score=182.09 Aligned_cols=140 Identities=31% Similarity=0.467 Sum_probs=124.3
Q ss_pred CCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEecC
Q 013004 300 GFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYM 378 (451)
Q Consensus 300 ~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~ 378 (451)
.|+..+.||+|+||.||+|... +++.||+|.++..........+.+|+.+++.++|+||+++++++......++||||+
T Consensus 5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06640 5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecC
Confidence 4667788999999999999864 588999998865433333457889999999999999999999999999999999999
Q ss_pred CCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 379 TNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 379 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
++|+|.+++... .+++.+...++.|++.|++|+|+. +++|+||+|+||+++.++.++++||
T Consensus 85 ~~~~L~~~i~~~-----~l~~~~~~~~~~~l~~~l~~lh~~---~ivH~dl~p~Nil~~~~~~~~l~df 145 (277)
T cd06640 85 GGGSALDLLRAG-----PFDEFQIATMLKEILKGLDYLHSE---KKIHRDIKAANVLLSEQGDVKLADF 145 (277)
T ss_pred CCCcHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhC---CccCcCCChhhEEEcCCCCEEEccc
Confidence 999999998643 378889999999999999999998 9999999999999999999999998
No 248
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=99.85 E-value=8.4e-22 Score=177.26 Aligned_cols=144 Identities=26% Similarity=0.362 Sum_probs=123.7
Q ss_pred HhcCCCCCCccCccCCceEEEEEe-CCCCEEEEEEcccccccc---c----HHHHHHHHHHHhcC-CCCCccceeeEEec
Q 013004 297 ATDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSG---G----ELQFQTEVKIISMA-VHRNLLRLYGFCTT 367 (451)
Q Consensus 297 ~~~~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~~---~----~~~~~~E~~~l~~l-~H~niv~l~~~~~~ 367 (451)
.-+.|...+.+|+|..+.|.++.. ++|+.+|+|++....... . ..+-.+|+.++.++ .||+|+++.+++.+
T Consensus 15 fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes 94 (411)
T KOG0599|consen 15 FYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYES 94 (411)
T ss_pred HHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccC
Confidence 345677789999999999998864 578999999985433211 1 12356788999877 49999999999999
Q ss_pred CCeeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 368 VTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 368 ~~~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+...++|+|.|+.|.|+++|.+.. .+++.+..+|+.|+.+|++|||.. +||||||||+|||+|++.+++|+||
T Consensus 95 ~sF~FlVFdl~prGELFDyLts~V----tlSEK~tR~iMrqlfegVeylHa~---~IVHRDLKpENILlddn~~i~isDF 167 (411)
T KOG0599|consen 95 DAFVFLVFDLMPRGELFDYLTSKV----TLSEKETRRIMRQLFEGVEYLHAR---NIVHRDLKPENILLDDNMNIKISDF 167 (411)
T ss_pred cchhhhhhhhcccchHHHHhhhhe----eecHHHHHHHHHHHHHHHHHHHHh---hhhhcccChhheeeccccceEEecc
Confidence 999999999999999999997754 489999999999999999999999 9999999999999999999999998
No 249
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=99.85 E-value=8.8e-21 Score=181.62 Aligned_cols=145 Identities=31% Similarity=0.479 Sum_probs=124.2
Q ss_pred cCCCCCCccCccCCceEEEEEeC------CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeee
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA------DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKL 372 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~------~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 372 (451)
.+|...+.||+|+||.||+++.. ++..+|+|.++... ......+.+|+++++.++|+||+++++++......+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 83 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS-ESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLL 83 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCC-HHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceE
Confidence 35677889999999999999742 35679999886432 223447999999999999999999999999999999
Q ss_pred EEEecCCCCChhHHhhccCC-----------CCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCC
Q 013004 373 LVYPYMTNGSVASRLRERQS-----------SLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441 (451)
Q Consensus 373 lv~ey~~~gsL~~~l~~~~~-----------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~ 441 (451)
+++||+++|+|.+++..... ....+++.++..++.|++.|++|||+. +++||||||+||++++++.
T Consensus 84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~nil~~~~~~ 160 (280)
T cd05092 84 MVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL---HFVHRDLATRNCLVGQGLV 160 (280)
T ss_pred EEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC---CeecccccHhhEEEcCCCC
Confidence 99999999999999876431 113478999999999999999999998 9999999999999999999
Q ss_pred ccchhh
Q 013004 442 QSSKTI 447 (451)
Q Consensus 442 ~~i~df 447 (451)
++++||
T Consensus 161 ~kL~df 166 (280)
T cd05092 161 VKIGDF 166 (280)
T ss_pred EEECCC
Confidence 999997
No 250
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=99.85 E-value=9.8e-21 Score=182.38 Aligned_cols=142 Identities=29% Similarity=0.422 Sum_probs=124.9
Q ss_pred cCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEec
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 377 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey 377 (451)
+.|+..+.||+|+||.||+|+.. +++.||+|.+.... ......+.+|+.+++.++|+||+++++++......++||||
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 90 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKS-EEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEF 90 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCC-HHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEec
Confidence 45777889999999999999874 58899999986432 22344688999999999999999999999999999999999
Q ss_pred CCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 378 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 378 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+++++|..++.+... .+++..+..++.|++.|++|||+. +++||||||+||+++.++.++++||
T Consensus 91 ~~~~~l~~~~~~~~~---~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~df 154 (292)
T cd06644 91 CPGGAVDAIMLELDR---GLTEPQIQVICRQMLEALQYLHSM---KIIHRDLKAGNVLLTLDGDIKLADF 154 (292)
T ss_pred CCCCcHHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHhcC---CeeecCCCcceEEEcCCCCEEEccC
Confidence 999999888765432 389999999999999999999998 9999999999999999999999998
No 251
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=99.85 E-value=6.9e-21 Score=181.22 Aligned_cols=144 Identities=31% Similarity=0.495 Sum_probs=123.0
Q ss_pred HhcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHHHhcC-CCCCccceeeEEecC------
Q 013004 297 ATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMA-VHRNLLRLYGFCTTV------ 368 (451)
Q Consensus 297 ~~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~------ 368 (451)
+++.|+..+.||+|+||.||+|+.. +++.||+|.+.... .....+.+|+.++..+ +|+||+++++++...
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~--~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (272)
T cd06637 4 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG--DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD 81 (272)
T ss_pred hhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC--ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence 3456777788999999999999864 58899999985432 2334688899999888 699999999998753
Q ss_pred CeeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 369 TEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 369 ~~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
...+++|||+.+|+|.+++..... ..++|..+..++.|++.|++|||+. +|+|||+||+||++++++.++++||
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~~~~--~~l~~~~~~~~~~qi~~~l~~LH~~---~ivh~dl~~~nili~~~~~~~l~Df 155 (272)
T cd06637 82 DQLWLVMEFCGAGSVTDLIKNTKG--NTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDF 155 (272)
T ss_pred cEEEEEEEcCCCCcHHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHEEECCCCCEEEccC
Confidence 457999999999999999976432 2488999999999999999999998 9999999999999999999999998
No 252
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=99.85 E-value=8.2e-21 Score=181.90 Aligned_cols=143 Identities=26% Similarity=0.473 Sum_probs=124.8
Q ss_pred CCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEecC
Q 013004 300 GFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYM 378 (451)
Q Consensus 300 ~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~ 378 (451)
+|+..+.||+|++|.||+|+.. +++.||||.++..........+.+|+.+++.++|+||+++++++...+..++||||+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM 80 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence 4777899999999999999975 588999999876543333446788999999999999999999999999999999999
Q ss_pred CCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 379 TNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 379 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
++ +|.+++..... ...+++..+..++.|++.||+|||+. +++||||||+||++++++.++++||
T Consensus 81 ~~-~l~~~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~h~dl~p~ni~~~~~~~~~l~d~ 144 (284)
T cd07836 81 DK-DLKKYMDTHGV-RGALDPNTVKSFTYQLLKGIAFCHEN---RVLHRDLKPQNLLINKRGELKLADF 144 (284)
T ss_pred Cc-cHHHHHHhcCC-CCCcCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCcEEEeec
Confidence 85 88888865432 23589999999999999999999998 9999999999999999999999997
No 253
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=99.85 E-value=6.7e-21 Score=179.59 Aligned_cols=139 Identities=30% Similarity=0.488 Sum_probs=121.5
Q ss_pred cCCCCCCccCccCCceEEEEEeCCCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEecC
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYM 378 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~ 378 (451)
++|+..+.||+|+||.||+|.. +++.||+|.++... ....+.+|+.++..++|||++++++++... ..+++|||+
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~---~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~ 80 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV---TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELM 80 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc---hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECC
Confidence 4577889999999999999985 67889999886432 234688999999999999999999988654 579999999
Q ss_pred CCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 379 TNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 379 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
++|+|.+++..... ..+++..+..++.|++.|+.|||+. +++||||||+||+++.++.++++||
T Consensus 81 ~~~~L~~~l~~~~~--~~~~~~~~~~~~~qi~~al~~lH~~---~~~H~dl~p~nili~~~~~~kl~Df 144 (254)
T cd05083 81 SKGNLVNFLRTRGR--ALVSVIQLLQFSLDVAEGMEYLESK---KLVHRDLAARNILVSEDGVAKVSDF 144 (254)
T ss_pred CCCCHHHHHHhcCc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCcEEECCC
Confidence 99999999976532 2478999999999999999999998 9999999999999999999999997
No 254
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.85 E-value=8.9e-21 Score=181.25 Aligned_cols=139 Identities=32% Similarity=0.486 Sum_probs=123.2
Q ss_pred CCCCCccCccCCceEEEEEe-CCCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEecCC
Q 013004 301 FSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMT 379 (451)
Q Consensus 301 f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~ 379 (451)
|+..+.||+|+||.||+|.. .+++.||+|.+...........+.+|+..+..++||||+++++++...+..++||||++
T Consensus 6 ~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 85 (277)
T cd06641 6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLG 85 (277)
T ss_pred hhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeCC
Confidence 56678899999999999986 46789999987544333334468899999999999999999999999999999999999
Q ss_pred CCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 380 NGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 380 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+++|.+++... .+++.....++.|++.|+.|||+. +++|+||||+||+++.++.++++||
T Consensus 86 ~~~l~~~i~~~-----~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~Ni~i~~~~~~~l~df 145 (277)
T cd06641 86 GGSALDLLEPG-----PLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADF 145 (277)
T ss_pred CCcHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHccC---CeecCCCCHHhEEECCCCCEEEeec
Confidence 99999988643 378999999999999999999998 9999999999999999999999997
No 255
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.85 E-value=5.7e-21 Score=183.59 Aligned_cols=146 Identities=27% Similarity=0.361 Sum_probs=124.6
Q ss_pred cCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecC--CeeeEEE
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTV--TEKLLVY 375 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~lv~ 375 (451)
++|...+.||.|++|.||+|... +++.+|+|.+..........++.+|+++++.++||||+++++++... +..++||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 80 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM 80 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence 35777889999999999999974 57899999986543333445789999999999999999999988653 4689999
Q ss_pred ecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 376 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 376 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
||+++++|.+++.........+++.....++.|++.||.|||+. +++|+||+|+||++++++.++++||
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~---~i~H~dl~~~nil~~~~~~~~l~df 149 (287)
T cd06621 81 EYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSR---KIIHRDIKPSNILLTRKGQVKLCDF 149 (287)
T ss_pred EecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecCCeEEEeec
Confidence 99999999988765333334578899999999999999999998 9999999999999999999999997
No 256
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=99.85 E-value=1.2e-20 Score=177.68 Aligned_cols=140 Identities=30% Similarity=0.471 Sum_probs=126.4
Q ss_pred cCCCCCCccCccCCceEEEEEeCC-CCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEec
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLAD-GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 377 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey 377 (451)
++|+..+.||+|+||.||+|...+ ++.+|+|.++.... ..++.+|+.+++.++|+||+++++++......++++||
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~ 79 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED---LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEY 79 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH---HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEec
Confidence 578888999999999999999764 78999999865422 45799999999999999999999999999999999999
Q ss_pred CCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 378 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 378 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+++++|.+++.... ..++|.....++.|++.|+.|||+. +++||||+|+||++++++.++++||
T Consensus 80 ~~~~~L~~~l~~~~---~~l~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~ni~~~~~~~~~l~df 143 (256)
T cd06612 80 CGAGSVSDIMKITN---KTLTEEEIAAILYQTLKGLEYLHSN---KKIHRDIKAGNILLNEEGQAKLADF 143 (256)
T ss_pred CCCCcHHHHHHhCc---cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEECCCCcEEEccc
Confidence 99999999987543 2489999999999999999999998 9999999999999999999999998
No 257
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.85 E-value=3.7e-22 Score=190.54 Aligned_cols=142 Identities=33% Similarity=0.449 Sum_probs=127.6
Q ss_pred CCCCCCccCccCCceEEEEEe-CCCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEecC
Q 013004 300 GFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYM 378 (451)
Q Consensus 300 ~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~ 378 (451)
.|...+.||+|.||.||+|.. .+++.||+|++..+...+...+.++|+.+++.++++||.++++.+..+..+|++||||
T Consensus 14 ~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~ 93 (467)
T KOG0201|consen 14 LYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYC 93 (467)
T ss_pred ccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHh
Confidence 466678999999999999986 4688999999987776666668899999999999999999999999999999999999
Q ss_pred CCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhhh
Q 013004 379 TNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 448 (451)
Q Consensus 379 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df~ 448 (451)
.+|++.+.++.... +++.....|..++..|+.|||++ +.+|||||+.|||+..+|.+|++||-
T Consensus 94 ~gGsv~~lL~~~~~----~~E~~i~~ilre~l~~l~ylH~~---~kiHrDIKaanil~s~~g~vkl~Dfg 156 (467)
T KOG0201|consen 94 GGGSVLDLLKSGNI----LDEFEIAVILREVLKGLDYLHSE---KKIHRDIKAANILLSESGDVKLADFG 156 (467)
T ss_pred cCcchhhhhccCCC----CccceeeeehHHHHHHhhhhhhc---ceecccccccceeEeccCcEEEEecc
Confidence 99999999976532 46677777899999999999999 99999999999999999999999983
No 258
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=99.85 E-value=4.3e-21 Score=184.72 Aligned_cols=152 Identities=32% Similarity=0.428 Sum_probs=127.5
Q ss_pred HHHHHHHhcCCCCCCccCccCCceEEEEEe-CCCCEEEEEEcccccccccHHHHHHHHHHHhcC-CCCCccceeeEEecC
Q 013004 291 LRELQVATDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMA-VHRNLLRLYGFCTTV 368 (451)
Q Consensus 291 ~~~~~~~~~~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~ 368 (451)
+.++..++++|+..+.||+|+||.||++.. .+++.+|+|.+.... .....+.+|+.++.++ +|||++++++++...
T Consensus 14 ~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~--~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~ 91 (291)
T cd06639 14 LESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS--DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKA 91 (291)
T ss_pred cccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc--cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEec
Confidence 344455678899999999999999999986 468899999885432 2234677899999888 799999999998754
Q ss_pred -----CeeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCcc
Q 013004 369 -----TEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQS 443 (451)
Q Consensus 369 -----~~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~ 443 (451)
...++|+||+++|+|.+++.........+++.....++.|++.||.|||+. +|+||||||+||++++++.++
T Consensus 92 ~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~nili~~~~~~k 168 (291)
T cd06639 92 DKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNN---RIIHRDVKGNNILLTTEGGVK 168 (291)
T ss_pred cccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEE
Confidence 357999999999999998865332233589999999999999999999998 999999999999999999999
Q ss_pred chhh
Q 013004 444 SKTI 447 (451)
Q Consensus 444 i~df 447 (451)
++||
T Consensus 169 l~df 172 (291)
T cd06639 169 LVDF 172 (291)
T ss_pred Eeec
Confidence 9997
No 259
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.85 E-value=1.6e-21 Score=193.75 Aligned_cols=139 Identities=26% Similarity=0.447 Sum_probs=119.1
Q ss_pred CCccCccCCceEEEEEeC-CCCEEEEEEcccc---cccccHHHHHHHHHHHhcCCCCCccceeeEEecCCe--eeEEEec
Q 013004 304 KNILGRGGFGKVYKGRLA-DGKLVAVKRLKEE---RTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTE--KLLVYPY 377 (451)
Q Consensus 304 ~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~---~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~--~~lv~ey 377 (451)
..+||+|+|-+||+|.+. +|..||.-.++.. .......+|..|+++++.++|+|||+++.+|.+... .-+|+|.
T Consensus 45 ~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL 124 (632)
T KOG0584|consen 45 DEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITEL 124 (632)
T ss_pred hhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeec
Confidence 467999999999999863 5788886554322 222333579999999999999999999999987655 7899999
Q ss_pred CCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCC-CCccchhh
Q 013004 378 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDED-ADQSSKTI 447 (451)
Q Consensus 378 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~-~~~~i~df 447 (451)
+..|+|..|.++.+. .+....+.++.||++||.|||++ .|+|||||||.+||+|+.+ |.+||+|.
T Consensus 125 ~TSGtLr~Y~kk~~~----vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDL 190 (632)
T KOG0584|consen 125 FTSGTLREYRKKHRR----VNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDL 190 (632)
T ss_pred ccCCcHHHHHHHhcc----CCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecch
Confidence 999999999987653 77888999999999999999997 8999999999999999987 89999985
No 260
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=99.85 E-value=7.3e-21 Score=180.24 Aligned_cols=143 Identities=32% Similarity=0.425 Sum_probs=126.7
Q ss_pred cCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEec
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 377 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey 377 (451)
++|+..+.||+|+||.||++... +++.||+|.+..........++.+|+..++.++||||+++++++...+..++++||
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEY 80 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEe
Confidence 35677789999999999999875 58899999986654333445789999999999999999999999999999999999
Q ss_pred CCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhc-CCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 378 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHE-HCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 378 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~-~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+++++|.+++.... ..+++.....++.|++.|++|||+ . +++||||||+||++++++.++++||
T Consensus 81 ~~~~~L~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~lH~~~---~i~H~dl~~~ni~~~~~~~~~l~d~ 145 (265)
T cd06605 81 MDGGSLDKILKEVQ---GRIPERILGKIAVAVLKGLTYLHEKH---KIIHRDVKPSNILVNSRGQIKLCDF 145 (265)
T ss_pred cCCCcHHHHHHHcc---CCCCHHHHHHHHHHHHHHHHHHcCCC---CeecCCCCHHHEEECCCCCEEEeec
Confidence 99999999997653 347889999999999999999999 7 9999999999999999999999997
No 261
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.85 E-value=4.3e-21 Score=181.26 Aligned_cols=141 Identities=26% Similarity=0.360 Sum_probs=125.1
Q ss_pred CCCCCCccCccCCceEEEEEeC-CCCEEEEEEccccccc--ccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEe
Q 013004 300 GFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS--GGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 376 (451)
Q Consensus 300 ~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 376 (451)
+|+..+.||+|+||.||+|+.. +++.||+|.+...... .....+.+|+.+++.++||||+++++++......++|+|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 3677789999999999999875 5889999998654322 234578999999999999999999999999999999999
Q ss_pred cCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 377 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 377 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|+.+++|.+++.... .+++.....++.|+++||.|||+. +++|+||||+||++++++.++++||
T Consensus 81 ~~~~~~L~~~l~~~~----~l~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~l~d~ 144 (258)
T cd05578 81 LLLGGDLRYHLSQKV----KFSEEQVKFWICEIVLALEYLHSK---GIIHRDIKPDNILLDEQGHVHITDF 144 (258)
T ss_pred CCCCCCHHHHHHhcC----CcCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEEcCCCCEEEeec
Confidence 999999999997652 488999999999999999999998 9999999999999999999999987
No 262
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=99.85 E-value=2.7e-22 Score=182.60 Aligned_cols=138 Identities=28% Similarity=0.482 Sum_probs=124.6
Q ss_pred CCCCCccCccCCceEEEEEe-CCCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEecCC
Q 013004 301 FSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMT 379 (451)
Q Consensus 301 f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~ 379 (451)
|+..+.+|+|+||.||+|.+ ..|+.+|||.+..+ .+..+...|+-+|++++.|+||++||.|.....+|+|||||-
T Consensus 35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~---sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCG 111 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD---TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCG 111 (502)
T ss_pred HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc---chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcC
Confidence 55568899999999999975 46999999998653 345578899999999999999999999999999999999999
Q ss_pred CCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 380 NGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 380 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
.|+..+.++.+.. ++++.+...+....++||+|||.. .-||||||+.|||++.+|.+|++||
T Consensus 112 AGSiSDI~R~R~K---~L~E~EIs~iL~~TLKGL~YLH~~---~KIHRDIKAGNILLNT~G~AKLADF 173 (502)
T KOG0574|consen 112 AGSISDIMRARRK---PLSEQEISAVLRDTLKGLQYLHDL---KKIHRDIKAGNILLNTDGIAKLADF 173 (502)
T ss_pred CCcHHHHHHHhcC---CccHHHHHHHHHHHHhHHHHHHHH---HHHHhhcccccEEEcccchhhhhhc
Confidence 9999999987643 589999999999999999999988 7899999999999999999999998
No 263
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=99.85 E-value=9.7e-21 Score=179.70 Aligned_cols=142 Identities=29% Similarity=0.427 Sum_probs=123.4
Q ss_pred CCCCCCccCccCCceEEEEEe-CCCCEEEEEEcccccccc-----cHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeE
Q 013004 300 GFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSG-----GELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLL 373 (451)
Q Consensus 300 ~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~~-----~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 373 (451)
+|+..+.||+|+||.||+|.. .+++.||+|.++...... ....+.+|+.++++++|+||+++++++.+.+..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 467788999999999999985 568999999986433111 13468899999999999999999999999999999
Q ss_pred EEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCC-Cccchhhh
Q 013004 374 VYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDA-DQSSKTIL 448 (451)
Q Consensus 374 v~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~-~~~i~df~ 448 (451)
|+||+++++|.+++.... .+++.....++.|++.||.|||+. +++||||||+||+++.++ .++++||-
T Consensus 81 v~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~ql~~al~~LH~~---~i~H~~i~~~nil~~~~~~~~~l~dfg 149 (268)
T cd06630 81 FVEWMAGGSVSHLLSKYG----AFKEAVIINYTEQLLRGLSYLHEN---QIIHRDVKGANLLIDSTGQRLRIADFG 149 (268)
T ss_pred EEeccCCCcHHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEcccc
Confidence 999999999999997643 378999999999999999999999 999999999999999876 58999873
No 264
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.85 E-value=1e-20 Score=180.39 Aligned_cols=140 Identities=31% Similarity=0.421 Sum_probs=125.7
Q ss_pred CCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEecC
Q 013004 300 GFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYM 378 (451)
Q Consensus 300 ~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~ 378 (451)
+|+..+.||.|+||.||+|+.. +++.||+|.+...........+.+|+.+++.++|+||+++++++......++|+||+
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (274)
T cd06609 2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYC 81 (274)
T ss_pred hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEee
Confidence 5777789999999999999865 588999999865443334456889999999999999999999999999999999999
Q ss_pred CCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 379 TNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 379 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
++++|.+++... .+++.....++.|++.|+.|||+. +++||||+|+||++++++.++++||
T Consensus 82 ~~~~L~~~~~~~-----~~~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~ 142 (274)
T cd06609 82 GGGSCLDLLKPG-----KLDETYIAFILREVLLGLEYLHEE---GKIHRDIKAANILLSEEGDVKLADF 142 (274)
T ss_pred CCCcHHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEccc
Confidence 999999998754 489999999999999999999998 9999999999999999999999998
No 265
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=99.85 E-value=5.5e-21 Score=181.61 Aligned_cols=140 Identities=32% Similarity=0.506 Sum_probs=119.3
Q ss_pred CccCccCCceEEEEEeCC-------CCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEec
Q 013004 305 NILGRGGFGKVYKGRLAD-------GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 377 (451)
Q Consensus 305 ~~lG~G~fg~Vy~~~~~~-------~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey 377 (451)
+.||+|+||.||+|+..+ ++.+|+|.+...........+.+|+.+++.++||||+++++++...+..+++|||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL 80 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence 368999999999998642 2579999886543333445789999999999999999999999998899999999
Q ss_pred CCCCChhHHhhccCC---CCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCC-----Cccchhh
Q 013004 378 MTNGSVASRLRERQS---SLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDA-----DQSSKTI 447 (451)
Q Consensus 378 ~~~gsL~~~l~~~~~---~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~-----~~~i~df 447 (451)
+++|+|.+++..... ....++|.++..++.|++.||.|||+. +++|+||||+||+++.++ .++++||
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~~~~~l~df 155 (269)
T cd05044 81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQM---HFIHRDLAARNCLVSEKGYDADRVVKIGDF 155 (269)
T ss_pred cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhC---CcccCCCChheEEEecCCCCCCcceEECCc
Confidence 999999999975422 123478999999999999999999998 899999999999999877 7899887
No 266
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=99.85 E-value=1.5e-20 Score=177.69 Aligned_cols=143 Identities=31% Similarity=0.464 Sum_probs=126.6
Q ss_pred hcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEe
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 376 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 376 (451)
.++|+..+.||+|+||.||+|... +++.+|+|.+...... ....+.+|+.+++.++||||+++++++...+..+++||
T Consensus 2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e 80 (262)
T cd06613 2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGD-DFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVME 80 (262)
T ss_pred ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchh-hHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEe
Confidence 356888899999999999999864 5788999998654322 34578999999999999999999999999999999999
Q ss_pred cCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 377 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 377 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|+++++|.+++.... ..+++.+...++.|++.||.|||+. +|+||||||+||++++++.++++||
T Consensus 81 ~~~~~~l~~~~~~~~---~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~ 145 (262)
T cd06613 81 YCGGGSLQDIYQVTR---GPLSELQIAYVCRETLKGLAYLHET---GKIHRDIKGANILLTEDGDVKLADF 145 (262)
T ss_pred CCCCCcHHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHhC---CceecCCChhhEEECCCCCEEECcc
Confidence 999999999887642 2388999999999999999999998 9999999999999999999999997
No 267
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=99.84 E-value=1e-21 Score=179.67 Aligned_cols=146 Identities=25% Similarity=0.387 Sum_probs=121.9
Q ss_pred hcCCCCCCccCccCCceEEEEEeCC-----CCEEEEEEccccccccc-HHHHHHHHHHHhcCCCCCccceeeEEec-CCe
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLAD-----GKLVAVKRLKEERTSGG-ELQFQTEVKIISMAVHRNLLRLYGFCTT-VTE 370 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~~-----~~~vAvK~~~~~~~~~~-~~~~~~E~~~l~~l~H~niv~l~~~~~~-~~~ 370 (451)
...|+....||+|.||.||+|.-.+ .+.+|+|+++......+ .....+|+.++..++|||||+|..++.+ +..
T Consensus 23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~ 102 (438)
T KOG0666|consen 23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKK 102 (438)
T ss_pred HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCce
Confidence 4568888999999999999996422 34799999976543322 3467899999999999999999998877 778
Q ss_pred eeEEEecCCCCChhHHhhccCC-CCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCC----CCccch
Q 013004 371 KLLVYPYMTNGSVASRLRERQS-SLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDED----ADQSSK 445 (451)
Q Consensus 371 ~~lv~ey~~~gsL~~~l~~~~~-~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~----~~~~i~ 445 (451)
.++++||.+. ||.+.++-... ....++-...+.|..||+.|+.|||++ =|+||||||.|||+..| |.+||+
T Consensus 103 v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~N---WvlHRDLKPaNIlvmgdgperG~VKIa 178 (438)
T KOG0666|consen 103 VWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSN---WVLHRDLKPANILVMGDGPERGRVKIA 178 (438)
T ss_pred EEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhh---heeeccCCcceEEEeccCCccCeeEee
Confidence 9999999987 89888875432 224577888999999999999999999 69999999999999988 889999
Q ss_pred hh
Q 013004 446 TI 447 (451)
Q Consensus 446 df 447 (451)
|+
T Consensus 179 Dl 180 (438)
T KOG0666|consen 179 DL 180 (438)
T ss_pred cc
Confidence 96
No 268
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=99.84 E-value=1.4e-20 Score=178.65 Aligned_cols=140 Identities=29% Similarity=0.462 Sum_probs=122.2
Q ss_pred CCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccc--------cHHHHHHHHHHHhcCCCCCccceeeEEecCCee
Q 013004 301 FSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSG--------GELQFQTEVKIISMAVHRNLLRLYGFCTTVTEK 371 (451)
Q Consensus 301 f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~--------~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 371 (451)
|...+.||+|+||.||+|... +++.||+|.+....... ....+.+|+.+++.++||||+++++++.+.+..
T Consensus 2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (267)
T cd06628 2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHL 81 (267)
T ss_pred ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCcc
Confidence 556788999999999999864 57899999885432211 113578899999999999999999999999999
Q ss_pred eEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 372 LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 372 ~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
++++||+++++|.+++.... .+++..+..++.|++.||+|||+. +++||||||+||++++++.++++||
T Consensus 82 ~lv~e~~~~~~L~~~l~~~~----~l~~~~~~~~~~~l~~~l~~lH~~---~ivH~di~p~nil~~~~~~~~l~df 150 (267)
T cd06628 82 NIFLEYVPGGSVAALLNNYG----AFEETLVRNFVRQILKGLNYLHNR---GIIHRDIKGANILVDNKGGIKISDF 150 (267)
T ss_pred EEEEEecCCCCHHHHHHhcc----CccHHHHHHHHHHHHHHHHHHHhc---CcccccCCHHHEEEcCCCCEEeccc
Confidence 99999999999999997643 378899999999999999999998 9999999999999999999999997
No 269
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=99.84 E-value=9.5e-22 Score=187.98 Aligned_cols=148 Identities=28% Similarity=0.410 Sum_probs=130.4
Q ss_pred HHHhcCCCCCCccCccCCceEEEEEe-CCCCEEEEEEcccccc--cccHHHHHHHHHHHhcCCCCCccceeeEEecCCee
Q 013004 295 QVATDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERT--SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEK 371 (451)
Q Consensus 295 ~~~~~~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 371 (451)
....+.|..-++||+|+||.||-++. .+|+.+|.|.+.+.+. ..+..-.+.|..++.+++.+.||.+-..|.+++.+
T Consensus 181 pvt~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~L 260 (591)
T KOG0986|consen 181 PVTKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDAL 260 (591)
T ss_pred hccccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCce
Confidence 34556788889999999999999985 4699999998854432 23344567899999999999999999999999999
Q ss_pred eEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 372 LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 372 ~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
++|+..|.||||..++..... +.+++..+..+|.+|+.||++||+. +||+|||||+|||+|+.|.++|+|.
T Consensus 261 ClVLtlMNGGDLkfHiyn~g~--~gF~e~ra~FYAAEi~cGLehlH~~---~iVYRDLKPeNILLDd~GhvRISDL 331 (591)
T KOG0986|consen 261 CLVLTLMNGGDLKFHIYNHGN--PGFDEQRARFYAAEIICGLEHLHRR---RIVYRDLKPENILLDDHGHVRISDL 331 (591)
T ss_pred EEEEEeecCCceeEEeeccCC--CCCchHHHHHHHHHHHhhHHHHHhc---ceeeccCChhheeeccCCCeEeecc
Confidence 999999999999999987754 4599999999999999999999999 9999999999999999999999985
No 270
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=99.84 E-value=5.2e-21 Score=189.69 Aligned_cols=141 Identities=23% Similarity=0.303 Sum_probs=119.0
Q ss_pred HhcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEccccccc-ccHHHHHHHHHHHhcCCCCCccceeeEEecC------
Q 013004 297 ATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS-GGELQFQTEVKIISMAVHRNLLRLYGFCTTV------ 368 (451)
Q Consensus 297 ~~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~------ 368 (451)
..++|+..+.||+|+||.||+|+.. +++.||||.+...... .....+.+|+.+++.++||||+++++++...
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 94 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF 94 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence 4568888999999999999999864 5889999998653322 2234678899999999999999999988643
Q ss_pred CeeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 369 TEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 369 ~~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
...++||||+++ ++.+.+.. .+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+|++||
T Consensus 95 ~~~~lv~e~~~~-~l~~~~~~------~l~~~~~~~~~~qi~~aL~~LH~~---givHrDikp~Nill~~~~~~kl~Df 163 (355)
T cd07874 95 QDVYLVMELMDA-NLCQVIQM------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDF 163 (355)
T ss_pred ceeEEEhhhhcc-cHHHHHhh------cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEECCCCCEEEeeC
Confidence 346999999975 66666643 278889999999999999999998 9999999999999999999999998
No 271
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=99.84 E-value=2.1e-20 Score=177.15 Aligned_cols=145 Identities=29% Similarity=0.434 Sum_probs=127.5
Q ss_pred cCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEec
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 377 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey 377 (451)
++|+..+.||+|+||+||+|... ++..+|+|++...........+.+|+..++.++|+||+++++.+...+..++++||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 80 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY 80 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence 46888899999999999999864 57899999986544333445789999999999999999999999999999999999
Q ss_pred CCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 378 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 378 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+++++|.++++.... ...+++.....++.|++.|++|||+. +|+||||||+||++++++..+++||
T Consensus 81 ~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~ql~~al~~lh~~---~i~h~~l~p~ni~~~~~~~~~l~df 146 (267)
T cd06610 81 LSGGSLLDIMKSSYP-RGGLDEAIIATVLKEVLKGLEYLHSN---GQIHRDIKAGNILLGEDGSVKIADF 146 (267)
T ss_pred cCCCcHHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEccc
Confidence 999999999976422 12478999999999999999999998 9999999999999999999999997
No 272
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.84 E-value=1.5e-20 Score=177.77 Aligned_cols=142 Identities=29% Similarity=0.449 Sum_probs=127.1
Q ss_pred cCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEec
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 377 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey 377 (451)
++|+..+.||+|++|.||+|+.. +++.||||++...........+.+|+..+..++|+|++++++++...+..++++||
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY 80 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence 35778899999999999999875 58999999986544323345799999999999999999999999999999999999
Q ss_pred CCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhc-CCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 378 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHE-HCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 378 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~-~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+++++|.+++... ..+++.....++.|+++|++|||+ . +++||||+|+||+++.++.++++||
T Consensus 81 ~~~~~L~~~l~~~----~~l~~~~~~~~~~~l~~~l~~lh~~~---~~~H~~l~~~ni~~~~~~~~~l~df 144 (264)
T cd06623 81 MDGGSLADLLKKV----GKIPEPVLAYIARQILKGLDYLHTKR---HIIHRDIKPSNLLINSKGEVKIADF 144 (264)
T ss_pred cCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHhccC---CCccCCCCHHHEEECCCCCEEEccC
Confidence 9999999999765 248899999999999999999999 8 9999999999999999999999997
No 273
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=99.84 E-value=1.5e-20 Score=177.99 Aligned_cols=141 Identities=30% Similarity=0.493 Sum_probs=125.1
Q ss_pred CCCCCCccCccCCceEEEEEeC-CCCEEEEEEccccccc-ccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEec
Q 013004 300 GFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS-GGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 377 (451)
Q Consensus 300 ~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey 377 (451)
+|+..+.||+|+||.||+|... +++.||+|.++..... .....+.+|+.+++.++|+||+++++++...+..++|+||
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY 80 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence 3677789999999999999864 6889999998654332 2345789999999999999999999999999999999999
Q ss_pred CCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 378 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 378 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+++++|.+++.... .+++..+..++.+++.|+.|||+. +|+||||||+||++++++.++++||
T Consensus 81 ~~~~~L~~~~~~~~----~~~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~kl~d~ 143 (264)
T cd06626 81 CSGGTLEELLEHGR----ILDEHVIRVYTLQLLEGLAYLHSH---GIVHRDIKPANIFLDHNGVIKLGDF 143 (264)
T ss_pred CCCCcHHHHHhhcC----CCChHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccc
Confidence 99999999987642 378899999999999999999998 9999999999999999999999998
No 274
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=99.84 E-value=4.6e-21 Score=181.28 Aligned_cols=131 Identities=26% Similarity=0.436 Sum_probs=111.2
Q ss_pred CccCccCCceEEEEEeCC--------CCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEe
Q 013004 305 NILGRGGFGKVYKGRLAD--------GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 376 (451)
Q Consensus 305 ~~lG~G~fg~Vy~~~~~~--------~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 376 (451)
+.||+|+||.||+|.... ...||+|.+.... ......+.+|+.+++.++||||+++++++......++|||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e 79 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSH-RNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQE 79 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchh-HHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEe
Confidence 469999999999997632 2348888774332 2223468889999999999999999999999899999999
Q ss_pred cCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCc
Q 013004 377 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQ 442 (451)
Q Consensus 377 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~ 442 (451)
|+++|+|.++++.... .+++.....++.|++.||.|||+. +|+||||||+||+++.++..
T Consensus 80 ~~~~g~L~~~l~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~ 139 (258)
T cd05078 80 YVKFGSLDTYLKKNKN---LINISWKLEVAKQLAWALHFLEDK---GLTHGNVCAKNVLLIREEDR 139 (258)
T ss_pred cCCCCcHHHHHhcCCC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEeccccc
Confidence 9999999999976532 478999999999999999999998 99999999999999988764
No 275
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.84 E-value=1.5e-20 Score=177.27 Aligned_cols=143 Identities=20% Similarity=0.314 Sum_probs=124.9
Q ss_pred CCCCCCccCccCCceEEEEEe-CCCCEEEEEEcccccc-cccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEec
Q 013004 300 GFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERT-SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 377 (451)
Q Consensus 300 ~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey 377 (451)
+|+..+.||+|+||.||+++. .+++.||+|.+..... .....++.+|+.+++.++||||+++++++.+.+..++|+||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY 80 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence 467788999999999999985 4688999999864322 22234789999999999999999999999999999999999
Q ss_pred CCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 378 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 378 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+++++|.+.+..... ..+++.+...++.|++.|+.|||+. +++|+||+|+||+++.++.++++||
T Consensus 81 ~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~l~~~nil~~~~~~~~l~d~ 145 (256)
T cd08218 81 CEGGDLYKKINAQRG--VLFPEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTIKLGDF 145 (256)
T ss_pred CCCCcHHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEEeec
Confidence 999999999876432 2478899999999999999999998 9999999999999999999999997
No 276
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=99.84 E-value=1e-20 Score=181.66 Aligned_cols=142 Identities=30% Similarity=0.477 Sum_probs=116.6
Q ss_pred CCCCCCccCccCCceEEEEEeC-CCCEEEEEEccccccccc-HHHHHHHHHHHhcC---CCCCccceeeEEec-----CC
Q 013004 300 GFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGG-ELQFQTEVKIISMA---VHRNLLRLYGFCTT-----VT 369 (451)
Q Consensus 300 ~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~-~~~~~~E~~~l~~l---~H~niv~l~~~~~~-----~~ 369 (451)
+|+..+.||+|+||+||+|+.. +++.||+|.++....... ...+.+|+.+++.+ +||||+++++++.. ..
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 3667789999999999999865 688999999865432222 23456777776655 69999999998764 24
Q ss_pred eeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 370 EKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 370 ~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
..++++||+. ++|.+++..... ..+++..+..++.|++.||.|||+. +|+||||||+||++++++.++++||
T Consensus 81 ~~~lv~e~~~-~~l~~~~~~~~~--~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~kl~df 152 (288)
T cd07863 81 KVTLVFEHVD-QDLRTYLDKVPP--PGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGQVKLADF 152 (288)
T ss_pred eEEEEEcccc-cCHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECcc
Confidence 5799999998 488888876432 2488999999999999999999999 9999999999999999999999998
No 277
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.84 E-value=1.4e-20 Score=181.11 Aligned_cols=141 Identities=28% Similarity=0.344 Sum_probs=122.1
Q ss_pred CCCCCCccCccCCceEEEEEe----CCCCEEEEEEcccccc---cccHHHHHHHHHHHhcC-CCCCccceeeEEecCCee
Q 013004 300 GFSNKNILGRGGFGKVYKGRL----ADGKLVAVKRLKEERT---SGGELQFQTEVKIISMA-VHRNLLRLYGFCTTVTEK 371 (451)
Q Consensus 300 ~f~~~~~lG~G~fg~Vy~~~~----~~~~~vAvK~~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~ 371 (451)
+|+..+.||+|+||.||+++. .+|+.||+|+++.... ......+.+|+.++..+ +|+||+++++++......
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 366778999999999999985 3688999999865322 11234678899999999 599999999999998899
Q ss_pred eEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 372 LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 372 ~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
++|+||+++++|.+++.... .+++.....++.|++.||.|||+. +++||||||+|||+++++.++++||
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~----~l~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~df 149 (290)
T cd05613 81 HLILDYINGGELFTHLSQRE----RFKEQEVQIYSGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDF 149 (290)
T ss_pred EEEEecCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEECCCCCEEEeeC
Confidence 99999999999999997643 378889999999999999999998 9999999999999999999999998
No 278
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=99.84 E-value=1.5e-20 Score=180.15 Aligned_cols=141 Identities=26% Similarity=0.405 Sum_probs=124.7
Q ss_pred CCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccc-cccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEec
Q 013004 300 GFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT-SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 377 (451)
Q Consensus 300 ~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey 377 (451)
+|+..+.||+|+||.||+|... +++.||+|++..... ......+.+|+.+++.++||||+++++++......++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 80 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY 80 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence 4677789999999999999864 688999999865432 22234789999999999999999999999999999999999
Q ss_pred CCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 378 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 378 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+ +++|.+++.... ..+++.++..++.|+++||+|||+. +++|+||||+||++++++.++++||
T Consensus 81 ~-~~~L~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~~~~~~~~~l~df 143 (286)
T cd07832 81 M-PSDLSEVLRDEE---RPLPEAQVKSYMRMLLKGVAYMHAN---GIMHRDLKPANLLISADGVLKIADF 143 (286)
T ss_pred c-CCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCHHHEEEcCCCcEEEeee
Confidence 9 999999987643 3489999999999999999999998 9999999999999999999999997
No 279
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=99.84 E-value=2.2e-20 Score=177.32 Aligned_cols=141 Identities=27% Similarity=0.462 Sum_probs=121.7
Q ss_pred CCCCCCccCccCCceEEEEEeC-CCCEEEEEEccccccc----ccHHHHHHHHHHHhcCCCCCccceeeEEec--CCeee
Q 013004 300 GFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS----GGELQFQTEVKIISMAVHRNLLRLYGFCTT--VTEKL 372 (451)
Q Consensus 300 ~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~----~~~~~~~~E~~~l~~l~H~niv~l~~~~~~--~~~~~ 372 (451)
+|+..+.||+|+||.||+|... +++.||+|.++..... .....+.+|+.+++.++||||+++++++.. ....+
T Consensus 3 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 82 (266)
T cd06651 3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLT 82 (266)
T ss_pred CccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEE
Confidence 6788899999999999999864 5889999988543211 122358889999999999999999998865 35678
Q ss_pred EEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 373 LVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 373 lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+++||+++++|.+++.... .+++.....++.|++.||+|||+. +|+||||||+||++++++.++++||
T Consensus 83 l~~e~~~~~~L~~~l~~~~----~l~~~~~~~~~~qi~~~l~~LH~~---~i~H~~l~p~nil~~~~~~~~l~df 150 (266)
T cd06651 83 IFMEYMPGGSVKDQLKAYG----ALTESVTRKYTRQILEGMSYLHSN---MIVHRDIKGANILRDSAGNVKLGDF 150 (266)
T ss_pred EEEeCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccC
Confidence 9999999999999997643 378899999999999999999998 9999999999999999999999998
No 280
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.84 E-value=1.5e-20 Score=179.54 Aligned_cols=140 Identities=26% Similarity=0.452 Sum_probs=123.9
Q ss_pred CCCCCCccCccCCceEEEEEe-CCCCEEEEEEcccccccccHHHHHHHHHHHhcCC---CCCccceeeEEecCCeeeEEE
Q 013004 300 GFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAV---HRNLLRLYGFCTTVTEKLLVY 375 (451)
Q Consensus 300 ~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~---H~niv~l~~~~~~~~~~~lv~ 375 (451)
.|+..+.||+|+||.||+|.. .+++.||+|.++.........++.+|+.+++.++ |||++++++++......+++|
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~ 81 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM 81 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence 366678899999999999986 5689999999865433334456889999998886 999999999999999999999
Q ss_pred ecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 376 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 376 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
||+++++|.++++.. .+++.....++.|++.||.|||+. +|+||||+|+||++++++.++++||
T Consensus 82 e~~~~~~L~~~~~~~-----~l~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~p~ni~i~~~~~~~l~df 145 (277)
T cd06917 82 EYAEGGSVRTLMKAG-----PIAEKYISVIIREVLVALKYIHKV---GVIHRDIKAANILVTNTGNVKLCDF 145 (277)
T ss_pred ecCCCCcHHHHHHcc-----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHHEEEcCCCCEEEccC
Confidence 999999999988653 388999999999999999999998 9999999999999999999999998
No 281
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=99.84 E-value=6.4e-21 Score=204.44 Aligned_cols=143 Identities=17% Similarity=0.304 Sum_probs=117.9
Q ss_pred HHhcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEccccccc-ccHHHHHHHHHHHhcCCCCCccceeeEEec--CCee
Q 013004 296 VATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS-GGELQFQTEVKIISMAVHRNLLRLYGFCTT--VTEK 371 (451)
Q Consensus 296 ~~~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~--~~~~ 371 (451)
...++|...+.||+|+||.||+|+.. +++.||+|.+...... .....|..|+.++..++|||||++++++.. ....
T Consensus 10 ~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~l 89 (1021)
T PTZ00266 10 SRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKL 89 (1021)
T ss_pred cccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEE
Confidence 44567888999999999999999864 5778999988644322 223468999999999999999999998854 3568
Q ss_pred eEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCC----CCeeecCCCCCceeeCC
Q 013004 372 LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCD----PKIIHRDVKAANILLDE 438 (451)
Q Consensus 372 ~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~----~~iiHrDlK~~NILld~ 438 (451)
|+||||+++|+|.+++.........+++..++.|+.||+.||.|||+... .+||||||||+|||++.
T Consensus 90 yIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s 160 (1021)
T PTZ00266 90 YILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLST 160 (1021)
T ss_pred EEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeec
Confidence 99999999999999997643333458999999999999999999998521 25999999999999975
No 282
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.84 E-value=1.1e-20 Score=187.99 Aligned_cols=140 Identities=22% Similarity=0.298 Sum_probs=118.7
Q ss_pred hcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEccccccc-ccHHHHHHHHHHHhcCCCCCccceeeEEecC------C
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS-GGELQFQTEVKIISMAVHRNLLRLYGFCTTV------T 369 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~------~ 369 (451)
.++|+..+.||+|+||.||+|+.. +++.||||++...... .....+.+|+.+++.++||||+++++++... .
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~ 102 (364)
T cd07875 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 102 (364)
T ss_pred hcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccC
Confidence 467888999999999999999864 5889999998653322 2234678999999999999999999987543 3
Q ss_pred eeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 370 EKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 370 ~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
..++||||+.+ ++.+.+.. .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+|++||
T Consensus 103 ~~~lv~e~~~~-~l~~~~~~------~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Df 170 (364)
T cd07875 103 DVYIVMELMDA-NLCQVIQM------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDF 170 (364)
T ss_pred eEEEEEeCCCC-CHHHHHHh------cCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEECCCCcEEEEeC
Confidence 57999999975 67777643 278889999999999999999998 9999999999999999999999998
No 283
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=99.84 E-value=1.2e-20 Score=180.86 Aligned_cols=142 Identities=22% Similarity=0.437 Sum_probs=123.6
Q ss_pred CCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccc-cHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEec
Q 013004 300 GFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 377 (451)
Q Consensus 300 ~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey 377 (451)
+|+..+.||+|+||.||+|+.. +++.||||.++...... ....+.+|++++++++||||+++++++.+.+..+++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 80 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence 4777889999999999999864 68899999986543222 234688999999999999999999999999999999999
Q ss_pred CCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 378 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 378 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+. ++|.+++..... ..+++.....++.|++.||+|||+. +++||||+|+||++++++.++++||
T Consensus 81 ~~-~~l~~~~~~~~~--~~l~~~~~~~~~~~i~~~l~~lh~~---~i~H~~l~p~nill~~~~~~~l~df 144 (284)
T cd07860 81 LH-QDLKKFMDASPL--SGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADF 144 (284)
T ss_pred cc-cCHHHHHHhCCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEeec
Confidence 96 689888875432 3488999999999999999999998 9999999999999999999999998
No 284
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=99.84 E-value=8.2e-21 Score=181.96 Aligned_cols=141 Identities=21% Similarity=0.424 Sum_probs=121.8
Q ss_pred CCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccc-cHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEec
Q 013004 300 GFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 377 (451)
Q Consensus 300 ~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey 377 (451)
+|+..+.||+|+||.||+|+.. +|+.||+|.++...... ....+.+|+.+++.++|+||+++++++.+....++++||
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY 80 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence 3667788999999999999874 68899999986533221 223578899999999999999999999999999999999
Q ss_pred CCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 378 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 378 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+. ++|.+++.... ..+++..+..++.|+++||.|||+. +|+||||||+||+++.++.++++||
T Consensus 81 ~~-~~l~~~~~~~~---~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dl~~~nil~~~~~~~~l~df 143 (284)
T cd07839 81 CD-QDLKKYFDSCN---GDIDPEIVKSFMFQLLKGLAFCHSH---NVLHRDLKPQNLLINKNGELKLADF 143 (284)
T ss_pred CC-CCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEcCCCcEEECcc
Confidence 97 58888776532 2489999999999999999999998 9999999999999999999999997
No 285
>PHA03207 serine/threonine kinase US3; Provisional
Probab=99.84 E-value=9.6e-21 Score=190.36 Aligned_cols=136 Identities=25% Similarity=0.296 Sum_probs=119.2
Q ss_pred hcCCCCCCccCccCCceEEEEEeC---CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEE
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLA---DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLV 374 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~---~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 374 (451)
..+|...+.||+|+||.||+|... +++.||+|.+... ..+.+|+.+++.++|||||++++++......+++
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~------~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv 164 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG------KTPGREIDILKTISHRAIINLIHAYRWKSTVCMV 164 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc------ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEE
Confidence 456888899999999999999753 3578999987532 2356899999999999999999999999999999
Q ss_pred EecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 375 YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 375 ~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|||+. ++|.+++... ..++|.++..++.|++.||.|||+. +|+||||||+|||++.++.++|+||
T Consensus 165 ~e~~~-~~l~~~l~~~----~~l~~~~~~~i~~ql~~aL~~LH~~---givHrDlkp~Nill~~~~~~~l~Df 229 (392)
T PHA03207 165 MPKYK-CDLFTYVDRS----GPLPLEQAITIQRRLLEALAYLHGR---GIIHRDVKTENIFLDEPENAVLGDF 229 (392)
T ss_pred ehhcC-CCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEccC
Confidence 99996 6888888433 2489999999999999999999998 9999999999999999999999998
No 286
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.84 E-value=1.3e-22 Score=179.96 Aligned_cols=143 Identities=23% Similarity=0.335 Sum_probs=122.6
Q ss_pred hcCCCCCCccCccCCceEEEEEe-CCCCEEEEEEccccc-ccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEE
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEER-TSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 375 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (451)
++.|+..++||+|+|+.||++.. ++|+.+|+|.+.... ...+.+++.+|+++...++|||||++...+.+....|+|+
T Consensus 10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvF 89 (355)
T KOG0033|consen 10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 89 (355)
T ss_pred chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEE
Confidence 45677778999999999999974 579999999885433 2234567899999999999999999999999999999999
Q ss_pred ecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCC---CCccchhh
Q 013004 376 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDED---ADQSSKTI 447 (451)
Q Consensus 376 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~---~~~~i~df 447 (451)
|+|+||+|..-+..+- ..++..+-.+++||++||.|.|.+ +|||||+||+|+|+.+. ..+|++||
T Consensus 90 e~m~G~dl~~eIV~R~----~ySEa~aSH~~rQiLeal~yCH~n---~IvHRDvkP~nllLASK~~~A~vKL~~F 157 (355)
T KOG0033|consen 90 DLVTGGELFEDIVARE----FYSEADASHCIQQILEALAYCHSN---GIVHRDLKPENLLLASKAKGAAVKLADF 157 (355)
T ss_pred ecccchHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeeeeccCCCceeeccc
Confidence 9999999988876652 367788889999999999999999 99999999999999864 25688887
No 287
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.84 E-value=2.2e-20 Score=178.55 Aligned_cols=136 Identities=29% Similarity=0.409 Sum_probs=119.1
Q ss_pred cCccCCceEEEEEeC-CCCEEEEEEcccccc--cccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEecCCCCCh
Q 013004 307 LGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSV 383 (451)
Q Consensus 307 lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~gsL 383 (451)
||+|+||+||+|... +++.||+|.+..... ......+.+|++++..++||||+++++++...+..++|+||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 689999999999864 688999999864321 22233577899999999999999999999999999999999999999
Q ss_pred hHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 384 ASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 384 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
.+++..... ..+++.++..++.|++.|+.|||+. +++||||||+||++++++.++++||
T Consensus 81 ~~~l~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~Nil~~~~~~~~l~df 139 (277)
T cd05577 81 KYHIYNVGE--PGFPEARAIFYAAQIICGLEHLHQR---RIVYRDLKPENVLLDDHGNVRISDL 139 (277)
T ss_pred HHHHHHcCc--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEccC
Confidence 999976542 2488999999999999999999998 9999999999999999999999997
No 288
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.84 E-value=1.4e-20 Score=181.27 Aligned_cols=142 Identities=25% Similarity=0.386 Sum_probs=122.9
Q ss_pred cCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccc-cHHHHHHHHHHHhcCCCCCccceeeEEecC--CeeeEE
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHRNLLRLYGFCTTV--TEKLLV 374 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~lv 374 (451)
++|+..+.||+|+||.||+|... +++.+|+|.++...... ....+.+|+.++..++||||+++++++... ...+++
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv 84 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV 84 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence 46778899999999999999975 58899999986543222 223577899999999999999999998877 889999
Q ss_pred EecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 375 YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 375 ~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+||+. ++|.+.+..... .+++.+...++.|++.||+|||+. +++||||||+||++++++.++++||
T Consensus 85 ~e~~~-~~L~~~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~~l~d~ 150 (293)
T cd07843 85 MEYVE-HDLKSLMETMKQ---PFLQSEVKCLMLQLLSGVAHLHDN---WILHRDLKTSNLLLNNRGILKICDF 150 (293)
T ss_pred ehhcC-cCHHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCcEEEeec
Confidence 99997 499888875432 489999999999999999999998 9999999999999999999999997
No 289
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.84 E-value=3.2e-21 Score=190.71 Aligned_cols=142 Identities=23% Similarity=0.306 Sum_probs=124.5
Q ss_pred cCCCCCCccCccCCceEEEEEe-CCCCEEEEEEcccccc--cccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEE
Q 013004 299 DGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERT--SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 375 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (451)
.-|..++.||-|+||+|.+++. .+...+|+|.+++... .........|..+|+..+.+.||+|+..|++++.+|+||
T Consensus 629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVM 708 (1034)
T KOG0608|consen 629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVM 708 (1034)
T ss_pred cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEE
Confidence 4478889999999999999974 4567899999965432 222334678999999999999999999999999999999
Q ss_pred ecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 376 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 376 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
||++|||+..+|.+..- +.+.-+..++.++.+|+++.|.. ++|||||||+|||||.||.+|+.||
T Consensus 709 dYIPGGDmMSLLIrmgI----FeE~LARFYIAEltcAiesVHkm---GFIHRDiKPDNILIDrdGHIKLTDF 773 (1034)
T KOG0608|consen 709 DYIPGGDMMSLLIRMGI----FEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDF 773 (1034)
T ss_pred eccCCccHHHHHHHhcc----CHHHHHHHHHHHHHHHHHHHHhc---cceecccCccceEEccCCceeeeec
Confidence 99999999999987643 77888888999999999999998 9999999999999999999999998
No 290
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.84 E-value=1.3e-20 Score=184.47 Aligned_cols=135 Identities=20% Similarity=0.204 Sum_probs=106.7
Q ss_pred HHhcCCCCCCccCccCCceEEEEEeC--CCCEEEEEEcccccc----cccHHHHHHHHHHHhcCCCCCccceeeEEecCC
Q 013004 296 VATDGFSNKNILGRGGFGKVYKGRLA--DGKLVAVKRLKEERT----SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVT 369 (451)
Q Consensus 296 ~~~~~f~~~~~lG~G~fg~Vy~~~~~--~~~~vAvK~~~~~~~----~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~ 369 (451)
...++|...+.||+|+||+||+|++. +++.||||++..... ......|.+|+++++.++|+|+++.+.. .+
T Consensus 15 ~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~---~~ 91 (365)
T PRK09188 15 ALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA---TG 91 (365)
T ss_pred cccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE---cC
Confidence 34567999999999999999999864 577789998643211 1123468999999999999999853322 24
Q ss_pred eeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCC-CCCceeeCCCCCccchhh
Q 013004 370 EKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDV-KAANILLDEDADQSSKTI 447 (451)
Q Consensus 370 ~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDl-K~~NILld~~~~~~i~df 447 (451)
..++||||+++++|.. ... .. ...++.++++||.|||+. +|+|||| ||+|||++.++.++|+||
T Consensus 92 ~~~LVmE~~~G~~L~~-~~~-------~~---~~~~~~~i~~aL~~lH~~---gIiHrDL~KP~NILv~~~~~ikLiDF 156 (365)
T PRK09188 92 KDGLVRGWTEGVPLHL-ARP-------HG---DPAWFRSAHRALRDLHRA---GITHNDLAKPQNWLMGPDGEAAVIDF 156 (365)
T ss_pred CcEEEEEccCCCCHHH-hCc-------cc---hHHHHHHHHHHHHHHHHC---CCeeCCCCCcceEEEcCCCCEEEEEC
Confidence 5799999999999962 211 01 135678999999999998 9999999 999999999999999998
No 291
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.84 E-value=2.5e-20 Score=176.82 Aligned_cols=142 Identities=27% Similarity=0.440 Sum_probs=121.7
Q ss_pred cCCCCCCccCccCCceEEEEEe-CCCCEEEEEEcccccc----cccHHHHHHHHHHHhcCCCCCccceeeEEecC--Cee
Q 013004 299 DGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERT----SGGELQFQTEVKIISMAVHRNLLRLYGFCTTV--TEK 371 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~----~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~ 371 (451)
.+|...+.||+|+||.||+|+. .+++.||+|.+..... ......+.+|+++++.++|+||+++++++.+. ...
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 3677889999999999999986 4589999998743211 12234688999999999999999999988764 457
Q ss_pred eEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 372 LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 372 ~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
++++||+++++|.+++.... .+++.....++.|++.||.|||+. +++||||||+||++++++.++++||
T Consensus 82 ~~v~e~~~~~~L~~~~~~~~----~l~~~~~~~~~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~df 150 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAYG----ALTENVTRRYTRQILQGVSYLHSN---MIVHRDIKGANILRDSAGNVKLGDF 150 (264)
T ss_pred EEEEEeCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcc
Confidence 89999999999999987543 378889999999999999999998 9999999999999999999999997
No 292
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.84 E-value=2.3e-20 Score=176.42 Aligned_cols=148 Identities=24% Similarity=0.345 Sum_probs=123.2
Q ss_pred CCCCCCccCccCCceEEEEEe-CCCCEEEEEEcccccc-cccHHHHHHHHHHHhcCCCCCccceeeEEec--CCeeeEEE
Q 013004 300 GFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERT-SGGELQFQTEVKIISMAVHRNLLRLYGFCTT--VTEKLLVY 375 (451)
Q Consensus 300 ~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~--~~~~~lv~ 375 (451)
+|+..+.||+|+||.||++.. .+++.||+|.++.... ......+..|+.+++.++|+||+++++++.. ....+++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 467778999999999999985 4678999999864332 2223468899999999999999999998764 44579999
Q ss_pred ecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCC--CCCeeecCCCCCceeeCCCCCccchhh
Q 013004 376 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHC--DPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 376 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~--~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
||+++++|.+++.........+++.....++.|++.||.|||..+ ..+++||||||+||++++++.++++||
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~ 154 (265)
T cd08217 81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDF 154 (265)
T ss_pred hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecc
Confidence 999999999999765333345899999999999999999999322 239999999999999999999999997
No 293
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.84 E-value=2e-20 Score=180.27 Aligned_cols=145 Identities=26% Similarity=0.400 Sum_probs=121.6
Q ss_pred cCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccc-cHHHHHHHHHHHhcCC-CCCccceeeEEecCCe-----
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSG-GELQFQTEVKIISMAV-HRNLLRLYGFCTTVTE----- 370 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~-~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~----- 370 (451)
++|+..+.||+|+||.||+|+.. +++.||+|.++...... ....+.+|+.+++.+. |+||+++++++...+.
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 46788899999999999999864 68899999886543222 2346888999999995 6999999999877655
Q ss_pred eeEEEecCCCCChhHHhhccCCC-CCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCC-CCCccchhh
Q 013004 371 KLLVYPYMTNGSVASRLRERQSS-LPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDE-DADQSSKTI 447 (451)
Q Consensus 371 ~~lv~ey~~~gsL~~~l~~~~~~-~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~-~~~~~i~df 447 (451)
.+++|||+++ ++.+++...... ...+++..+..++.|+++||.|||+. +|+||||||+||+++. ++.++++||
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~~~nil~~~~~~~~kl~df 155 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKH---GVMHRDLKPQNLLVDKQKGLLKIADL 155 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEecCCCeEEEeec
Confidence 7999999985 888888654322 23579999999999999999999998 9999999999999999 789999997
No 294
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.84 E-value=2.4e-20 Score=178.60 Aligned_cols=135 Identities=29% Similarity=0.381 Sum_probs=113.0
Q ss_pred ccCccCCceEEEEEeC-CCCEEEEEEccccccc--ccHHHHHHHHHHH---hcCCCCCccceeeEEecCCeeeEEEecCC
Q 013004 306 ILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS--GGELQFQTEVKII---SMAVHRNLLRLYGFCTTVTEKLLVYPYMT 379 (451)
Q Consensus 306 ~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~--~~~~~~~~E~~~l---~~l~H~niv~l~~~~~~~~~~~lv~ey~~ 379 (451)
+||+|+||.||++... +++.+|+|.+...... .....+.+|..++ ...+||||+++++++...+..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 4899999999999864 5889999988654322 1122344554433 34479999999999999999999999999
Q ss_pred CCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 380 NGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 380 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+|+|.+++.... .+++.....++.|++.||+|||+. +|+||||||+|||+++++.++++||
T Consensus 81 ~~~L~~~i~~~~----~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dikp~Nil~~~~~~~~l~df 141 (279)
T cd05633 81 GGDLHYHLSQHG----VFSEKEMRFYATEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDL 141 (279)
T ss_pred CCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcCCCCCCHHHEEECCCCCEEEccC
Confidence 999999887643 389999999999999999999998 9999999999999999999999997
No 295
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.84 E-value=1.2e-21 Score=180.13 Aligned_cols=145 Identities=29% Similarity=0.361 Sum_probs=127.9
Q ss_pred HHhcCCCCCCccCccCCceEEEEEe-CCCCEEEEEEcccccccc--cHHHHHHHHHHHhcCCCCCccceeeEEecCCeee
Q 013004 296 VATDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSG--GELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKL 372 (451)
Q Consensus 296 ~~~~~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 372 (451)
+..++|+..+++|+|.||+|..++- .+++.+|+|+++++..-. ....-+.|-++++..+||.+..+...+++.+.++
T Consensus 165 vTm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlC 244 (516)
T KOG0690|consen 165 VTMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLC 244 (516)
T ss_pred eccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEE
Confidence 3457888899999999999999974 579999999998765322 2224578899999999999999999999999999
Q ss_pred EEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 373 LVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 373 lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
.||||..||.|+.+|.... .+++.....+-..|..||.|||++ +||+||||.+|+|+|.||.+||.||
T Consensus 245 FVMeyanGGeLf~HLsrer----~FsE~RtRFYGaEIvsAL~YLHs~---~ivYRDlKLENLlLDkDGHIKitDF 312 (516)
T KOG0690|consen 245 FVMEYANGGELFFHLSRER----VFSEDRTRFYGAEIVSALGYLHSR---NIVYRDLKLENLLLDKDGHIKITDF 312 (516)
T ss_pred EEEEEccCceEeeehhhhh----cccchhhhhhhHHHHHHhhhhhhC---CeeeeechhhhheeccCCceEeeec
Confidence 9999999999999987653 378888889999999999999999 9999999999999999999999998
No 296
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=99.84 E-value=4e-20 Score=176.02 Aligned_cols=144 Identities=27% Similarity=0.408 Sum_probs=118.5
Q ss_pred CCCCCccCccCCceEEEEEeC----CCCEEEEEEccccccc-ccHHHHHHHHHHHhcCCCCCccceeeEEecCC------
Q 013004 301 FSNKNILGRGGFGKVYKGRLA----DGKLVAVKRLKEERTS-GGELQFQTEVKIISMAVHRNLLRLYGFCTTVT------ 369 (451)
Q Consensus 301 f~~~~~lG~G~fg~Vy~~~~~----~~~~vAvK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~------ 369 (451)
|...+.||+|+||.||+|.+. +++.||||.++..... ....++.+|+.+++.++||||+++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 455688999999999999753 3688999998654322 23346889999999999999999999886532
Q ss_pred eeeEEEecCCCCChhHHhhccCC--CCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 370 EKLLVYPYMTNGSVASRLRERQS--SLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 370 ~~~lv~ey~~~gsL~~~l~~~~~--~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
..++++||+.+|+|.+++..... ....+++.....++.|++.||+|||+. +|+||||||+||++++++.++++||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~nili~~~~~~kl~df 157 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSK---NFIHRDLAARNCMLNENMTVCVADF 157 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccchhhEEEcCCCCEEECcc
Confidence 24788999999999988754321 122478899999999999999999998 9999999999999999999999997
No 297
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=99.84 E-value=3e-20 Score=178.03 Aligned_cols=140 Identities=30% Similarity=0.468 Sum_probs=122.1
Q ss_pred CCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEecCC
Q 013004 301 FSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMT 379 (451)
Q Consensus 301 f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~ 379 (451)
|+..+.||+|+||.||+|+.. ++..+|+|.+.... ......+.+|+.++..++||||+++++++...+..++|+||++
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~ 85 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKS-EEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCA 85 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCC-HHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecC
Confidence 455678999999999999875 47788999885432 2233468899999999999999999999999999999999999
Q ss_pred CCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 380 NGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 380 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+|+|..++.... ..+++..+..++.|+++||.|||+. +|+||||||+||+++.++.++++||
T Consensus 86 ~~~l~~~~~~~~---~~l~~~~~~~~~~qi~~~L~~LH~~---~i~H~dlkp~nili~~~~~~kl~df 147 (282)
T cd06643 86 GGAVDAVMLELE---RPLTEPQIRVVCKQTLEALNYLHEN---KIIHRDLKAGNILFTLDGDIKLADF 147 (282)
T ss_pred CCcHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEccCCCEEEccc
Confidence 999998876532 2489999999999999999999998 9999999999999999999999998
No 298
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.84 E-value=2.4e-20 Score=182.95 Aligned_cols=138 Identities=30% Similarity=0.415 Sum_probs=118.9
Q ss_pred CccCcc--CCceEEEEEe-CCCCEEEEEEcccccccc-cHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEecCCC
Q 013004 305 NILGRG--GFGKVYKGRL-ADGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTN 380 (451)
Q Consensus 305 ~~lG~G--~fg~Vy~~~~-~~~~~vAvK~~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~ 380 (451)
..||+| +||+||+++. .+++.||+|.+....... ....+.+|+.+++.++||||+++++++...+..++++||+.+
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~ 83 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY 83 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence 346666 8999999986 468999999986543222 234688999999999999999999999999999999999999
Q ss_pred CChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 381 GSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 381 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|++.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++..++.||
T Consensus 84 ~~l~~~l~~~~~--~~~~~~~~~~~~~qi~~aL~~lH~~---~ivHrDlkp~Nill~~~~~~~~~~~ 145 (328)
T cd08226 84 GSANSLLKTYFP--EGMSEALIGNILFGALRGLNYLHQN---GYIHRNIKASHILISGDGLVSLSGL 145 (328)
T ss_pred CCHHHHHHhhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEeCCCcEEEech
Confidence 999999876532 2378899999999999999999998 9999999999999999999999887
No 299
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.83 E-value=4.8e-21 Score=185.47 Aligned_cols=142 Identities=25% Similarity=0.354 Sum_probs=124.4
Q ss_pred CCCCCCccCccCCceEEEEEe-CCCCEEEEEEcccccccc-cHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEec
Q 013004 300 GFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 377 (451)
Q Consensus 300 ~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey 377 (451)
-|+..+.||+|.|+.|-.|++ =+|..||||++.+..... ....+..|++.|+.++|||||+||++..+...+|+|+|.
T Consensus 19 LYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLEL 98 (864)
T KOG4717|consen 19 LYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILEL 98 (864)
T ss_pred eehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEe
Confidence 366678899999999999974 379999999996544322 223578999999999999999999999999999999999
Q ss_pred CCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCC-CCccchhh
Q 013004 378 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDED-ADQSSKTI 447 (451)
Q Consensus 378 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~-~~~~i~df 447 (451)
-.+|+|++++.+.... +.+.-+.++..||..|+.|+|.. .+|||||||+||.+-+. |-+|+.||
T Consensus 99 GD~GDl~DyImKHe~G---l~E~La~kYF~QI~~AI~YCHqL---HVVHRDLKPENVVFFEKlGlVKLTDF 163 (864)
T KOG4717|consen 99 GDGGDLFDYIMKHEEG---LNEDLAKKYFAQIVHAISYCHQL---HVVHRDLKPENVVFFEKLGLVKLTDF 163 (864)
T ss_pred cCCchHHHHHHhhhcc---ccHHHHHHHHHHHHHHHHHHhhh---hhhcccCCcceeEEeeecCceEeeec
Confidence 9999999999887543 88899999999999999999998 89999999999988775 78999998
No 300
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.83 E-value=1.9e-20 Score=180.94 Aligned_cols=140 Identities=21% Similarity=0.375 Sum_probs=124.7
Q ss_pred cCCCCCCccCccCCceEEEEEe-CCCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEec
Q 013004 299 DGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 377 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey 377 (451)
.+|+..+.||.|+||.||+|.. .+++.||+|.+..... .....+.+|+..++.++||||+++++++...+..++|+||
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 97 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQ-PKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEY 97 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccC-chHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEe
Confidence 3577788999999999999985 5689999998854322 2344688999999999999999999999999999999999
Q ss_pred CCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 378 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 378 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+++++|.+++... .+++.++..++.|++.|++|||+. +++||||||+||+++.++.++++||
T Consensus 98 ~~~~~L~~~~~~~-----~l~~~~~~~i~~~l~~al~~LH~~---~i~H~dL~p~Nili~~~~~~kl~df 159 (296)
T cd06655 98 LAGGSLTDVVTET-----CMDEAQIAAVCRECLQALEFLHAN---QVIHRDIKSDNVLLGMDGSVKLTDF 159 (296)
T ss_pred cCCCcHHHHHHhc-----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccC
Confidence 9999999988653 378999999999999999999999 9999999999999999999999998
No 301
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=99.83 E-value=3.2e-20 Score=180.99 Aligned_cols=137 Identities=23% Similarity=0.352 Sum_probs=112.1
Q ss_pred CCccCccCCceEEEEEeC---CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEec--CCeeeEEEecC
Q 013004 304 KNILGRGGFGKVYKGRLA---DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTT--VTEKLLVYPYM 378 (451)
Q Consensus 304 ~~~lG~G~fg~Vy~~~~~---~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~--~~~~~lv~ey~ 378 (451)
.+.||+|+||+||+|+.. +++.||+|.++... ....+.+|+.+++.++||||+++++++.. ....++++||+
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~ 82 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG---ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYA 82 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC---CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEecc
Confidence 467999999999999864 46789999885432 22357889999999999999999998854 45678999998
Q ss_pred CCCChhHHhhccCC-----CCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceee----CCCCCccchhh
Q 013004 379 TNGSVASRLRERQS-----SLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILL----DEDADQSSKTI 447 (451)
Q Consensus 379 ~~gsL~~~l~~~~~-----~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILl----d~~~~~~i~df 447 (451)
. ++|.+++..... ....+++..+..++.|++.||+|||+. +|+||||||+|||+ +.++.+|++||
T Consensus 83 ~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivHrDlkp~Nil~~~~~~~~~~~kl~Df 156 (317)
T cd07868 83 E-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADM 156 (317)
T ss_pred C-CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEecCCCCcCcEEEeec
Confidence 6 588887754221 122478899999999999999999999 99999999999999 45578999998
No 302
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.83 E-value=4.1e-20 Score=177.43 Aligned_cols=143 Identities=27% Similarity=0.447 Sum_probs=127.8
Q ss_pred HhcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEE
Q 013004 297 ATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 375 (451)
Q Consensus 297 ~~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (451)
.++.|+..+.||+|+||.||+|... +++.||+|.++.... ....+.+|++.+..++|+|++++++++......++++
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 94 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ--NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVM 94 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch--hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEE
Confidence 4556777789999999999999875 688999999865432 3456889999999999999999999999999999999
Q ss_pred ecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 376 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 376 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
||+++++|.+++.... ..+++..+..++.|++.||.|||+. +|+|+||||+||+++.++.++++||
T Consensus 95 e~~~~~~L~~~l~~~~---~~l~~~~~~~i~~~i~~~L~~lH~~---gi~H~dl~p~ni~i~~~~~~~l~d~ 160 (286)
T cd06614 95 EYMDGGSLTDIITQNF---VRMNEPQIAYVCREVLQGLEYLHSQ---NVIHRDIKSDNILLSKDGSVKLADF 160 (286)
T ss_pred eccCCCcHHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCChhhEEEcCCCCEEECcc
Confidence 9999999999998754 2489999999999999999999998 9999999999999999999999998
No 303
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=99.83 E-value=1.4e-20 Score=181.53 Aligned_cols=137 Identities=26% Similarity=0.373 Sum_probs=120.0
Q ss_pred CCCCccCccCCceEEEEEe-CCCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEecCCC
Q 013004 302 SNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTN 380 (451)
Q Consensus 302 ~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~ 380 (451)
.....||+|+||.||++.. .+++.||||.+.... ......+.+|+..+..++|+||+++++.+...+..++||||+++
T Consensus 25 ~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~ 103 (292)
T cd06658 25 DSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRK-QQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEG 103 (292)
T ss_pred hhhhcccCCCCeEEEEEEECCCCCEEEEEEEecch-HHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCC
Confidence 3346699999999999986 468899999885432 22334688999999999999999999999999999999999999
Q ss_pred CChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 381 GSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 381 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
++|.+++... .+++.+...++.|++.||.|||+. +|+||||||+||++++++.++++||
T Consensus 104 ~~L~~~~~~~-----~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kL~df 162 (292)
T cd06658 104 GALTDIVTHT-----RMNEEQIATVCLSVLRALSYLHNQ---GVIHRDIKSDSILLTSDGRIKLSDF 162 (292)
T ss_pred CcHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEccC
Confidence 9999988542 378999999999999999999998 9999999999999999999999997
No 304
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=99.83 E-value=3.8e-20 Score=175.89 Aligned_cols=145 Identities=24% Similarity=0.360 Sum_probs=120.9
Q ss_pred CCCCCCccCccCCceEEEEEeCC--CCEEEEEEcccccc---------cccHHHHHHHHHHHhc-CCCCCccceeeEEec
Q 013004 300 GFSNKNILGRGGFGKVYKGRLAD--GKLVAVKRLKEERT---------SGGELQFQTEVKIISM-AVHRNLLRLYGFCTT 367 (451)
Q Consensus 300 ~f~~~~~lG~G~fg~Vy~~~~~~--~~~vAvK~~~~~~~---------~~~~~~~~~E~~~l~~-l~H~niv~l~~~~~~ 367 (451)
+|+..+.||+|+||.||+|.... ++.+|+|.+..... .....++.+|+.++.+ ++||||+++++++..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 46778899999999999999754 68899998753221 1112356778887764 789999999999999
Q ss_pred CCeeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhc-CCCCCeeecCCCCCceeeCCCCCccchh
Q 013004 368 VTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHE-HCDPKIIHRDVKAANILLDEDADQSSKT 446 (451)
Q Consensus 368 ~~~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~-~~~~~iiHrDlK~~NILld~~~~~~i~d 446 (451)
.+..+++|||+++++|.+++.........+++..+..++.|++.||.|||+ . +++||||||+||++++++.++++|
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---~i~H~dl~~~nil~~~~~~~~l~d 157 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEK---RIVHRDLTPNNIMLGEDDKVTITD 157 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCC---ceeecCCCHHHEEECCCCcEEEec
Confidence 999999999999999999886532223458899999999999999999996 4 799999999999999999999999
Q ss_pred h
Q 013004 447 I 447 (451)
Q Consensus 447 f 447 (451)
|
T Consensus 158 f 158 (269)
T cd08528 158 F 158 (269)
T ss_pred c
Confidence 8
No 305
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.83 E-value=2.9e-20 Score=179.78 Aligned_cols=145 Identities=28% Similarity=0.449 Sum_probs=123.4
Q ss_pred HHhcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEccccccc-ccHHHHHHHHHHHhcCCCCCccceeeEEecCC----
Q 013004 296 VATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS-GGELQFQTEVKIISMAVHRNLLRLYGFCTTVT---- 369 (451)
Q Consensus 296 ~~~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~---- 369 (451)
...++|+..+.||+|+||.||+|... +++.||+|.++..... .....+.+|+.+++.++||||+++++++.+..
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 35678888999999999999999975 5889999998654322 22346788999999999999999999987654
Q ss_pred ------eeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCcc
Q 013004 370 ------EKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQS 443 (451)
Q Consensus 370 ------~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~ 443 (451)
..++++||+++ ++...+.... ..+++..+..++.|++.||+|||+. +|+||||||+||++++++.+|
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~k 156 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLESGL---VHFSEDHIKSFMKQLLEGLNYCHKK---NFLHRDIKCSNILLNNKGQIK 156 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCcEE
Confidence 78999999986 7777766532 2489999999999999999999998 999999999999999999999
Q ss_pred chhh
Q 013004 444 SKTI 447 (451)
Q Consensus 444 i~df 447 (451)
++||
T Consensus 157 l~df 160 (302)
T cd07864 157 LADF 160 (302)
T ss_pred eCcc
Confidence 9997
No 306
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.83 E-value=3.6e-20 Score=176.12 Aligned_cols=146 Identities=32% Similarity=0.453 Sum_probs=125.8
Q ss_pred HhcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHHHhcC-CCCCccceeeEEecCC-----
Q 013004 297 ATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMA-VHRNLLRLYGFCTTVT----- 369 (451)
Q Consensus 297 ~~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~----- 369 (451)
.+++|+..+.||+|+||.||+|... +++.+|+|.+..... ...++.+|+.++.++ +|+||+++++++....
T Consensus 4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (275)
T cd06608 4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED--EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGND 81 (275)
T ss_pred chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch--hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcc
Confidence 4678999999999999999999975 578999998864332 234689999999998 6999999999987644
Q ss_pred -eeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 370 -EKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 370 -~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
..++||||+++++|.+++.........+++..+..++.|++.||.|||+. +++||||+|+||++++++.++++||
T Consensus 82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~~l~p~ni~~~~~~~~~l~d~ 157 (275)
T cd06608 82 DQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHEN---KVIHRDIKGQNILLTKNAEVKLVDF 157 (275)
T ss_pred eEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEEccCCeEEECCC
Confidence 48999999999999998876432234589999999999999999999998 9999999999999999999999998
No 307
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=99.83 E-value=4.4e-20 Score=174.10 Aligned_cols=143 Identities=23% Similarity=0.338 Sum_probs=122.0
Q ss_pred CCCCCCccCccCCceEEEEEeC-CCCEEEEEEccccccc-ccHHHHHHHHHHHhcCCCCCccceeeEEec-CCeeeEEEe
Q 013004 300 GFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS-GGELQFQTEVKIISMAVHRNLLRLYGFCTT-VTEKLLVYP 376 (451)
Q Consensus 300 ~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~-~~~~~lv~e 376 (451)
+|+..+.||+|++|.||++... +++.||+|.+...... .....+.+|+.+++.++|+|++++++.+.. ....+++||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 4677889999999999999864 5789999998643322 233468899999999999999999988764 445789999
Q ss_pred cCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 377 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 377 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|+++++|.+++..... ..+++.++..++.+++.|++|||+. +++||||||+||+++.++..+++||
T Consensus 81 ~~~~~~l~~~l~~~~~--~~l~~~~~~~~~~~l~~~l~~lH~~---~i~H~di~p~nil~~~~~~~~l~df 146 (257)
T cd08223 81 FCEGGDLYHKLKEQKG--KLLPENQVVEWFVQIAMALQYLHEK---HILHRDLKTQNVFLTRTNIIKVGDL 146 (257)
T ss_pred ccCCCcHHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCchhEEEecCCcEEEecc
Confidence 9999999999976432 2489999999999999999999998 9999999999999999999999987
No 308
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.83 E-value=2.3e-20 Score=181.16 Aligned_cols=137 Identities=26% Similarity=0.358 Sum_probs=117.1
Q ss_pred CccCccCCceEEEEEe-CCCCEEEEEEcccccc-cccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEecCCCCC
Q 013004 305 NILGRGGFGKVYKGRL-ADGKLVAVKRLKEERT-SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGS 382 (451)
Q Consensus 305 ~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~gs 382 (451)
+++|+|-||+||-|.. ++|+.||||.+.+.+. ..++.++++|+.+++.++||.||.+...|++++..+.|||-+.| |
T Consensus 570 evLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~G-D 648 (888)
T KOG4236|consen 570 EVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHG-D 648 (888)
T ss_pred hhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcc-h
Confidence 7899999999999985 5799999999976553 33456799999999999999999999999999999999999855 5
Q ss_pred hhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCC---CCccchhh
Q 013004 383 VASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDED---ADQSSKTI 447 (451)
Q Consensus 383 L~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~---~~~~i~df 447 (451)
..+.+-.... .++++...+.++.||+.||.|||.+ +|+|.||||+|||+.+. .++|++||
T Consensus 649 MLEMILSsEk--gRL~er~TkFlvtQIL~ALr~LH~k---nIvHCDLKPENVLLas~~~FPQvKlCDF 711 (888)
T KOG4236|consen 649 MLEMILSSEK--GRLPERITKFLVTQILVALRYLHFK---NIVHCDLKPENVLLASASPFPQVKLCDF 711 (888)
T ss_pred HHHHHHHhhc--ccchHHHHHHHHHHHHHHHHHhhhc---ceeeccCCchheeeccCCCCCceeeccc
Confidence 5555443322 3488888889999999999999999 99999999999999975 37899998
No 309
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=99.83 E-value=3e-20 Score=179.27 Aligned_cols=141 Identities=23% Similarity=0.374 Sum_probs=124.7
Q ss_pred hcCCCCCCccCccCCceEEEEEe-CCCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEe
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 376 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 376 (451)
.++|...+.||+|+||.||++.. .+++.||+|.+..... .....+.+|+.++..++||||+++++++...+..++|+|
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~-~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e 96 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQ-PKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVME 96 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccc-hHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEe
Confidence 35788889999999999999985 4678999999854322 223468899999999999999999999999999999999
Q ss_pred cCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 377 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 377 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|+++++|.+++.+. .+++.++..++.|++.|+.|||+. +++||||||+||+++.++.++++||
T Consensus 97 ~~~~~~L~~~~~~~-----~l~~~~~~~i~~~l~~al~~LH~~---gi~H~dL~p~Nili~~~~~~kL~df 159 (293)
T cd06647 97 YLAGGSLTDVVTET-----CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDF 159 (293)
T ss_pred cCCCCcHHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHHhC---CEeeccCCHHHEEEcCCCCEEEccC
Confidence 99999999998753 278899999999999999999999 9999999999999999999999998
No 310
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.83 E-value=2.4e-20 Score=176.23 Aligned_cols=134 Identities=28% Similarity=0.415 Sum_probs=119.4
Q ss_pred cCccCCceEEEEEeC-CCCEEEEEEccccccc--ccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEecCCCCCh
Q 013004 307 LGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS--GGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSV 383 (451)
Q Consensus 307 lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~gsL 383 (451)
||+|+||.||+++.. +++.+|+|.++..... .....+.+|+.++..++|+||+++++.+......++++||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 689999999999976 4899999998654321 2334688999999999999999999999999999999999999999
Q ss_pred hHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 384 ASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 384 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
.+++.... .+++..+..++.|+++||+|||+. +++||||+|+||++++++.++++||
T Consensus 81 ~~~l~~~~----~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~di~~~nil~~~~~~~~l~df 137 (265)
T cd05579 81 ASLLENVG----SLDEDVARIYIAEIVLALEYLHSN---GIIHRDLKPDNILIDSNGHLKLTDF 137 (265)
T ss_pred HHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHc---CeecCCCCHHHeEEcCCCCEEEEec
Confidence 99997643 389999999999999999999998 9999999999999999999999997
No 311
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=99.83 E-value=2.2e-20 Score=179.18 Aligned_cols=141 Identities=25% Similarity=0.353 Sum_probs=122.6
Q ss_pred CCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccc-cHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEec
Q 013004 300 GFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 377 (451)
Q Consensus 300 ~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey 377 (451)
+|+..+.||+|+||.||+|... +++.||+|.++...... ....+.+|+++++.++|+||+++++++...+..++++||
T Consensus 2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 81 (288)
T cd07833 2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEY 81 (288)
T ss_pred ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEec
Confidence 5777889999999999999875 58899999986543222 234689999999999999999999999999999999999
Q ss_pred CCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 378 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 378 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
++++.+..+..... .+++.+...++.|++.||.|||+. +++||||+|+||++++++.++++||
T Consensus 82 ~~~~~l~~~~~~~~----~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~ni~~~~~~~~kl~d~ 144 (288)
T cd07833 82 VERTLLELLEASPG----GLPPDAVRSYIWQLLQAIAYCHSH---NIIHRDIKPENILVSESGVLKLCDF 144 (288)
T ss_pred CCCCHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEEee
Confidence 99877766554432 378999999999999999999998 9999999999999999999999997
No 312
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.83 E-value=1.6e-20 Score=168.96 Aligned_cols=134 Identities=18% Similarity=0.258 Sum_probs=102.5
Q ss_pred CCccCccCCceEEEEEeCCCCEEEEEEcccccccc-c-------HHHH-----------------HHHHHHHhcCCCCCc
Q 013004 304 KNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSG-G-------ELQF-----------------QTEVKIISMAVHRNL 358 (451)
Q Consensus 304 ~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~-~-------~~~~-----------------~~E~~~l~~l~H~ni 358 (451)
...||+|+||.||+|..++|+.||||+++...... . ...| ..|+..+..+.++++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 36799999999999998889999999997543211 1 0122 348899999988776
Q ss_pred cceeeEEecCCeeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhH-hcCCCCCeeecCCCCCceeeC
Q 013004 359 LRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYL-HEHCDPKIIHRDVKAANILLD 437 (451)
Q Consensus 359 v~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yL-H~~~~~~iiHrDlK~~NILld 437 (451)
.....+.. ...++||||++++++....... ..+++.+...++.|++.+|.|+ |+. +|+||||||+|||++
T Consensus 82 ~~p~~~~~--~~~~iVmE~i~g~~l~~~~~~~----~~~~~~~~~~i~~qi~~~L~~l~H~~---giiHrDlkP~NIli~ 152 (190)
T cd05147 82 PCPEPILL--KSHVLVMEFIGDDGWAAPRLKD----APLSESKARELYLQVIQIMRILYQDC---RLVHADLSEYNLLYH 152 (190)
T ss_pred CCCcEEEe--cCCEEEEEEeCCCCCcchhhhc----CCCCHHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEE
Confidence 44333222 2348999999998776543222 1378899999999999999999 677 899999999999998
Q ss_pred CCCCccchhh
Q 013004 438 EDADQSSKTI 447 (451)
Q Consensus 438 ~~~~~~i~df 447 (451)
++.++++||
T Consensus 153 -~~~v~LiDF 161 (190)
T cd05147 153 -DGKLYIIDV 161 (190)
T ss_pred -CCcEEEEEc
Confidence 467899998
No 313
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=99.83 E-value=2.7e-20 Score=179.94 Aligned_cols=135 Identities=24% Similarity=0.346 Sum_probs=119.5
Q ss_pred CCccCccCCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEecCCCCC
Q 013004 304 KNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGS 382 (451)
Q Consensus 304 ~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~gs 382 (451)
...||+|+||.||+|... +++.||+|.+..... .....+.+|+..+..++||||+++++++...+..++++||+++++
T Consensus 26 ~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~-~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~ 104 (297)
T cd06659 26 YIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQ-QRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGA 104 (297)
T ss_pred hhhcCCCCceeEEEEEEcCCCCEEEEEEEEeccc-chHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCC
Confidence 456999999999999864 688999999854322 233468899999999999999999999999999999999999999
Q ss_pred hhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 383 VASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 383 L~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|..++... .+++.+...++.|++.||.|||+. +++||||||+||+++.++.++++||
T Consensus 105 L~~~~~~~-----~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dl~p~Nill~~~~~~kL~df 161 (297)
T cd06659 105 LTDIVSQT-----RLNEEQIATVCESVLQALCYLHSQ---GVIHRDIKSDSILLTLDGRVKLSDF 161 (297)
T ss_pred HHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHeEEccCCcEEEeec
Confidence 99877542 378999999999999999999998 9999999999999999999999998
No 314
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=99.83 E-value=4.4e-20 Score=173.85 Aligned_cols=143 Identities=28% Similarity=0.410 Sum_probs=123.1
Q ss_pred CCCCCCccCccCCceEEEEEe-CCCCEEEEEEcccccc-cccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEec
Q 013004 300 GFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERT-SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 377 (451)
Q Consensus 300 ~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey 377 (451)
+|+..+.||+|+||.||++.. .+++.+|+|.+..... ......+.+|+.+++.++||||+++++.+...+..++|+||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY 80 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence 467778999999999999986 4688999999864322 22344788999999999999999999999989999999999
Q ss_pred CCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCC-Cccchhh
Q 013004 378 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDA-DQSSKTI 447 (451)
Q Consensus 378 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~-~~~i~df 447 (451)
+++++|.+++..... ..+++..+..++.+++.|+.|||++ +++||||||+||++++++ .++++||
T Consensus 81 ~~~~~L~~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~~l~d~ 146 (256)
T cd08220 81 APGGTLAEYIQKRCN--SLLDEDTILHFFVQILLALHHVHTK---LILHRDLKTQNILLDKHKMVVKIGDF 146 (256)
T ss_pred CCCCCHHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccC
Confidence 999999999976432 2478999999999999999999998 999999999999998654 5789887
No 315
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.83 E-value=3.6e-21 Score=192.31 Aligned_cols=140 Identities=29% Similarity=0.427 Sum_probs=123.1
Q ss_pred CCCCccCccCCceEEEEEeC--CCC--EEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEec
Q 013004 302 SNKNILGRGGFGKVYKGRLA--DGK--LVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 377 (451)
Q Consensus 302 ~~~~~lG~G~fg~Vy~~~~~--~~~--~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey 377 (451)
...+.||+|.||.|++|.|. .|+ .||||.++.+.......+|++|+.+|.+++|+|+|+|||+..+ ....||+|.
T Consensus 113 ~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~EL 191 (1039)
T KOG0199|consen 113 KLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFEL 191 (1039)
T ss_pred HHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhh
Confidence 34578999999999999884 344 6899999876554455689999999999999999999999887 668999999
Q ss_pred CCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 378 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 378 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
++.|+|.+.|++.. ...+-......++.|||.||+||.++ ++|||||.++|+|+.....+||+||
T Consensus 192 aplGSLldrLrka~--~~~llv~~Lcdya~QiA~aM~YLesk---rlvHRDLAARNlllasprtVKI~DF 256 (1039)
T KOG0199|consen 192 APLGSLLDRLRKAK--KAILLVSRLCDYAMQIAKAMQYLESK---RLVHRDLAARNLLLASPRTVKICDF 256 (1039)
T ss_pred cccchHHHHHhhcc--ccceeHHHHHHHHHHHHHHHHHHhhh---hhhhhhhhhhhheecccceeeeecc
Confidence 99999999999832 23477788889999999999999999 9999999999999999999999998
No 316
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.83 E-value=5.5e-20 Score=174.10 Aligned_cols=134 Identities=26% Similarity=0.374 Sum_probs=119.0
Q ss_pred cCccCCceEEEEEeC-CCCEEEEEEccccccc--ccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEecCCCCCh
Q 013004 307 LGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS--GGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSV 383 (451)
Q Consensus 307 lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~gsL 383 (451)
||+|+||.||+|+.. +++.||+|.+...... .....+.+|+.+++.++||||+++++++.+.+..++++||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 689999999999975 4889999998654322 2234688999999999999999999999999999999999999999
Q ss_pred hHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 384 ASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 384 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
.+++.... .+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++++||
T Consensus 81 ~~~l~~~~----~l~~~~~~~~~~~i~~~l~~lH~~---~~~h~dl~~~nilv~~~~~~~l~df 137 (262)
T cd05572 81 WTILRDRG----LFDEYTARFYIACVVLAFEYLHNR---GIIYRDLKPENLLLDSNGYVKLVDF 137 (262)
T ss_pred HHHHhhcC----CCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEEcCCCCEEEeeC
Confidence 99997643 378899999999999999999998 9999999999999999999999987
No 317
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.83 E-value=6.4e-20 Score=178.13 Aligned_cols=142 Identities=30% Similarity=0.444 Sum_probs=121.7
Q ss_pred cCCCCCCccCccCCceEEEEEeC-CCCEEEEEEccccccc--ccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEE
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS--GGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 375 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (451)
+.|+..+.||+|+||.||+|+.. +++.||+|.+...... .....+.+|+.++..++||||+++++++...+..++|+
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~ 94 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM 94 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence 44777889999999999999864 6899999988543222 22246889999999999999999999999999999999
Q ss_pred ecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 376 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 376 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
||+. |++.+.+..... .+++..+..++.|++.||.|||+. +|+||||+|+||++++++.++++||
T Consensus 95 e~~~-g~l~~~~~~~~~---~l~~~~~~~~~~ql~~~L~~LH~~---~i~H~dl~p~nIl~~~~~~~kL~df 159 (307)
T cd06607 95 EYCL-GSASDILEVHKK---PLQEVEIAAICHGALQGLAYLHSH---ERIHRDIKAGNILLTEPGTVKLADF 159 (307)
T ss_pred HhhC-CCHHHHHHHccc---CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEECCCCCEEEeec
Confidence 9997 577777654322 389999999999999999999998 9999999999999999999999997
No 318
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=99.83 E-value=8.5e-20 Score=171.63 Aligned_cols=145 Identities=26% Similarity=0.406 Sum_probs=127.0
Q ss_pred CCCCCCccCccCCceEEEEEeC-CCCEEEEEEccccccc-ccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEec
Q 013004 300 GFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS-GGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 377 (451)
Q Consensus 300 ~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey 377 (451)
+|+..+.||+|+||.||++... +++.||+|++...... .....+.+|++.++.++|+|++++.+.+......++++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~ 80 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY 80 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence 4667788999999999999874 5889999998654332 2334688999999999999999999999999999999999
Q ss_pred CCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 378 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 378 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+++++|.+++.........+++.+...++.+++.||.|||+. +++|+||+|+||++++++.++++||
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~---~~~H~dl~~~nil~~~~~~~~l~d~ 147 (258)
T cd08215 81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSR---KILHRDIKPQNIFLTSNGLVKLGDF 147 (258)
T ss_pred cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHHeEEcCCCcEEECCc
Confidence 999999999987542234589999999999999999999999 9999999999999999999999997
No 319
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.83 E-value=2.8e-20 Score=183.01 Aligned_cols=141 Identities=21% Similarity=0.352 Sum_probs=120.5
Q ss_pred hcCCCCCCccCccCCceEEEEEe-CCCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecC-----Cee
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTV-----TEK 371 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-----~~~ 371 (451)
.++|+..+.||+|+||.||+|+. .+++.||+|.++..........+.+|+.+++.++|+||+++++++... ...
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 83 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV 83 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence 46788899999999999999985 468999999986433333344688899999999999999999987643 357
Q ss_pred eEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 372 LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 372 ~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
++++||+.+ ++.+.+... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++++||
T Consensus 84 ~lv~e~~~~-~l~~~~~~~-----~l~~~~~~~i~~ql~~aL~~LH~~---~ivH~dlkp~Nill~~~~~~kl~df 150 (336)
T cd07849 84 YIVQELMET-DLYKLIKTQ-----HLSNDHIQYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTNCDLKICDF 150 (336)
T ss_pred EEEehhccc-CHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEECcc
Confidence 999999974 888777543 389999999999999999999999 9999999999999999999999997
No 320
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.82 E-value=4.3e-20 Score=174.02 Aligned_cols=143 Identities=20% Similarity=0.363 Sum_probs=123.1
Q ss_pred CCCCCCccCccCCceEEEEEeC-CCCEEEEEEccccccc-ccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEec
Q 013004 300 GFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS-GGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 377 (451)
Q Consensus 300 ~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey 377 (451)
+|+..+.||+|+||.||+|... ++..||+|.+...... .....+.+|+.+++.++|+||+++++.+......++++||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 80 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY 80 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence 3667789999999999999875 5789999998653221 2334688999999999999999999999999999999999
Q ss_pred CCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCC-Cccchhh
Q 013004 378 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDA-DQSSKTI 447 (451)
Q Consensus 378 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~-~~~i~df 447 (451)
+++++|.+++..... ..++|..+..++.|++.||.|||+. +++|+||||+||++++++ ..+++||
T Consensus 81 ~~~~~L~~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~~~l~d~ 146 (257)
T cd08225 81 CDGGDLMKRINRQRG--VLFSEDQILSWFVQISLGLKHIHDR---KILHRDIKSQNIFLSKNGMVAKLGDF 146 (257)
T ss_pred CCCCcHHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEcCCCCeEEeccc
Confidence 999999999976432 2479999999999999999999998 999999999999999886 4588886
No 321
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.82 E-value=6.6e-20 Score=175.29 Aligned_cols=139 Identities=24% Similarity=0.334 Sum_probs=117.9
Q ss_pred CCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHHHhcCC-CCCccceeeEEecC--CeeeEEEe
Q 013004 301 FSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAV-HRNLLRLYGFCTTV--TEKLLVYP 376 (451)
Q Consensus 301 f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~--~~~~lv~e 376 (451)
|+..+.||+|+||.||+|+.. +++.||+|.++............+|+..+.++. |+|++++++++.+. +..++|+|
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 455678999999999999864 688999999865433333334567888888885 99999999999887 88999999
Q ss_pred cCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 377 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 377 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|++ |++.+.+.... ..++|.++..++.|++.||+|||+. +++||||||+||++++ +.++++||
T Consensus 81 ~~~-~~l~~~l~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~p~ni~l~~-~~~kl~df 143 (282)
T cd07831 81 LMD-MNLYELIKGRK---RPLPEKRVKSYMYQLLKSLDHMHRN---GIFHRDIKPENILIKD-DILKLADF 143 (282)
T ss_pred cCC-ccHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEcC-CCeEEEec
Confidence 997 58888887543 2489999999999999999999998 9999999999999999 99999997
No 322
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.82 E-value=5.7e-20 Score=178.58 Aligned_cols=143 Identities=29% Similarity=0.476 Sum_probs=122.1
Q ss_pred hcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEccccccccc-HHHHHHHHHHHhcCCCCCccceeeEEecC--CeeeE
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGG-ELQFQTEVKIISMAVHRNLLRLYGFCTTV--TEKLL 373 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~-~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~l 373 (451)
.++|+..+.||+|+||.||+|... +|+.||+|.++....... ...+.+|+.++..++|+||+++++++... +..++
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL 85 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence 467888999999999999999864 589999999865432222 23567899999999999999999998754 56899
Q ss_pred EEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 374 VYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 374 v~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
||||+.+ +|.+++.... ..+++.++..++.|++.||+|||+. +++||||||+||++++++.++++||
T Consensus 86 v~e~~~~-~l~~~l~~~~---~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~kL~df 152 (309)
T cd07845 86 VMEYCEQ-DLASLLDNMP---TPFSESQVKCLMLQLLRGLQYLHEN---FIIHRDLKVSNLLLTDKGCLKIADF 152 (309)
T ss_pred EEecCCC-CHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECcc
Confidence 9999974 8888886542 3489999999999999999999999 9999999999999999999999997
No 323
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.82 E-value=5.5e-20 Score=176.10 Aligned_cols=151 Identities=30% Similarity=0.476 Sum_probs=126.2
Q ss_pred cHHHHHHHhcCCCCCCccCccCCceEEEEEe-CCCCEEEEEEcccccccccHHHHHHHHHHHhcC-CCCCccceeeEEec
Q 013004 290 SLRELQVATDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMA-VHRNLLRLYGFCTT 367 (451)
Q Consensus 290 ~~~~~~~~~~~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~ 367 (451)
++.++......|+..+.||+|+||.||+|+. .+++.||+|.+.... ....++..|+.++.++ +|+||+++++++..
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~--~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 84 (282)
T cd06636 7 DLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE--DEEEEIKLEINMLKKYSHHRNIATYYGAFIK 84 (282)
T ss_pred hhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh--HHHHHHHHHHHHHHHhcCCCcEEEEeeehhc
Confidence 3444455667888889999999999999986 458899999875432 2234678899988888 69999999998853
Q ss_pred ------CCeeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCC
Q 013004 368 ------VTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441 (451)
Q Consensus 368 ------~~~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~ 441 (451)
....+++|||+++|+|.+++..... ..+++..+..++.|++.|+.|||+. +|+|||+||+||++++++.
T Consensus 85 ~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dl~~~nili~~~~~ 159 (282)
T cd06636 85 KSPPGHDDQLWLVMEFCGAGSVTDLVKNTKG--NALKEDWIAYICREILRGLAHLHAH---KVIHRDIKGQNVLLTENAE 159 (282)
T ss_pred ccccCCCCEEEEEEEeCCCCcHHHHHHHccC--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCC
Confidence 4568999999999999999876432 2378888899999999999999998 9999999999999999999
Q ss_pred ccchhh
Q 013004 442 QSSKTI 447 (451)
Q Consensus 442 ~~i~df 447 (451)
++++||
T Consensus 160 ~~l~df 165 (282)
T cd06636 160 VKLVDF 165 (282)
T ss_pred EEEeeC
Confidence 999997
No 324
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.82 E-value=5.2e-20 Score=181.71 Aligned_cols=143 Identities=24% Similarity=0.378 Sum_probs=121.3
Q ss_pred HHhcCCCCCCccCccCCceEEEEEe-CCCCEEEEEEcccccccc-cHHHHHHHHHHHhcCCCCCccceeeEEecCC----
Q 013004 296 VATDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHRNLLRLYGFCTTVT---- 369 (451)
Q Consensus 296 ~~~~~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~---- 369 (451)
...++|+..+.||+|+||.||+|.. .+++.||||+++...... ....+.+|+.+++.++||||+++++++....
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07880 12 EVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDR 91 (343)
T ss_pred ccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccc
Confidence 3467788899999999999999985 468999999985432221 2335789999999999999999999887543
Q ss_pred --eeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 370 --EKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 370 --~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
..++||||+ +++|.+++... .+++..+..++.|+++||+|||+. +|+||||||+||++++++.++++||
T Consensus 92 ~~~~~lv~e~~-~~~l~~~~~~~-----~l~~~~~~~i~~qi~~al~~LH~~---gi~H~dlkp~Nill~~~~~~kl~df 162 (343)
T cd07880 92 FHDFYLVMPFM-GTDLGKLMKHE-----KLSEDRIQFLVYQMLKGLKYIHAA---GIIHRDLKPGNLAVNEDCELKILDF 162 (343)
T ss_pred cceEEEEEecC-CCCHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeec
Confidence 358999998 77898887542 388999999999999999999998 9999999999999999999999987
No 325
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.82 E-value=3.8e-20 Score=176.59 Aligned_cols=143 Identities=27% Similarity=0.371 Sum_probs=125.9
Q ss_pred cCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccc--cccHHHHHHHHHHHhcCC-CCCccceeeEEecCCeeeEE
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVKIISMAV-HRNLLRLYGFCTTVTEKLLV 374 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lv 374 (451)
++|...+.||+|+||.||+|+.. +++.||+|.+..... ......+.+|+.++..++ |+||+++++++...+..+++
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 36777889999999999999864 689999999865322 122346888999999998 99999999999999999999
Q ss_pred EecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhhh
Q 013004 375 YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 448 (451)
Q Consensus 375 ~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df~ 448 (451)
|||+++++|.+++.... .+++.....++.|++.||.|||+. +++|+|+||+||+++.++.++++||=
T Consensus 81 ~e~~~~~~L~~~l~~~~----~l~~~~~~~i~~ql~~~l~~Lh~~---~~~H~dl~~~ni~i~~~~~~~l~df~ 147 (280)
T cd05581 81 LEYAPNGELLQYIRKYG----SLDEKCTRFYAAEILLALEYLHSK---GIIHRDLKPENILLDKDMHIKITDFG 147 (280)
T ss_pred EcCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEecCCc
Confidence 99999999999997653 489999999999999999999998 99999999999999999999999973
No 326
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.82 E-value=6.2e-20 Score=177.99 Aligned_cols=143 Identities=29% Similarity=0.467 Sum_probs=120.6
Q ss_pred hcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccc-cHHHHHHHHHHHhcCCCCCccceeeEEecCC------
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHRNLLRLYGFCTTVT------ 369 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~------ 369 (451)
.++|+..+.||+|+||.||+|+.. +++.||||.+....... ....+.+|+.+++.++||||+++++++....
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 90 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY 90 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence 456888899999999999999864 68899999886433222 2335678999999999999999999987654
Q ss_pred --eeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 370 --EKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 370 --~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
..++||||+. +++.+.+.... ..+++.+...++.|++.||.|||++ +++||||||+||+++.++.++++||
T Consensus 91 ~~~~~lv~e~~~-~~l~~~l~~~~---~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~df 163 (310)
T cd07865 91 KGSFYLVFEFCE-HDLAGLLSNKN---VKFTLSEIKKVMKMLLNGLYYIHRN---KILHRDMKAANILITKDGILKLADF 163 (310)
T ss_pred CceEEEEEcCCC-cCHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEECCCCcEEECcC
Confidence 3599999997 48888876543 2489999999999999999999998 9999999999999999999999997
No 327
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=99.82 E-value=7.6e-20 Score=177.95 Aligned_cols=144 Identities=23% Similarity=0.389 Sum_probs=119.9
Q ss_pred CCCCCCccCccCCceEEEEEeC---CCCEEEEEEcccccc--cccHHHHHHHHHHHhcCCCCCccceeeEEecC--Ceee
Q 013004 300 GFSNKNILGRGGFGKVYKGRLA---DGKLVAVKRLKEERT--SGGELQFQTEVKIISMAVHRNLLRLYGFCTTV--TEKL 372 (451)
Q Consensus 300 ~f~~~~~lG~G~fg~Vy~~~~~---~~~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~ 372 (451)
+|+..+.||+|+||.||+|... +++.||+|.+..... ......+.+|+.++..++||||+++++++... ...+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 3667788999999999999864 478999999865321 12234678899999999999999999999987 7899
Q ss_pred EEEecCCCCChhHHhhccCCC-CCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCC----CCCccchhh
Q 013004 373 LVYPYMTNGSVASRLRERQSS-LPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDE----DADQSSKTI 447 (451)
Q Consensus 373 lv~ey~~~gsL~~~l~~~~~~-~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~----~~~~~i~df 447 (451)
+||||+++ ++.+.+...... ...+++.....++.|++.||.|||+. +|+||||||+||+++. ++.+|++||
T Consensus 81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~h~dlkp~Nil~~~~~~~~~~~kl~Df 156 (316)
T cd07842 81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSN---WVLHRDLKPANILVMGEGPERGVVKIGDL 156 (316)
T ss_pred EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEEcCCCCccceEEECCC
Confidence 99999975 677766543222 22578899999999999999999998 9999999999999999 889999997
No 328
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.82 E-value=1.3e-19 Score=170.16 Aligned_cols=141 Identities=29% Similarity=0.486 Sum_probs=124.8
Q ss_pred CCCCCCccCccCCceEEEEEeC-CCCEEEEEEccccccc-ccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEec
Q 013004 300 GFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS-GGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 377 (451)
Q Consensus 300 ~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey 377 (451)
+|+..+.||+|++|.||+++.. +++.||+|.+...... .....+.+|++++..++|+|++++++++......++++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY 80 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence 4667789999999999999865 5789999998654322 2234689999999999999999999999999999999999
Q ss_pred CCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 378 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 378 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+++++|.+++.... .+++..+..++.|++.|+.|||+. +|+||||||+||+++.++.++++||
T Consensus 81 ~~~~~L~~~~~~~~----~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~ 143 (254)
T cd06627 81 AENGSLRQIIKKFG----PFPESLVAVYVYQVLQGLAYLHEQ---GVIHRDIKAANILTTKDGVVKLADF 143 (254)
T ss_pred CCCCcHHHHHHhcc----CCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEECCCCCEEEecc
Confidence 99999999987652 489999999999999999999998 9999999999999999999999997
No 329
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=99.82 E-value=2.2e-20 Score=187.07 Aligned_cols=140 Identities=27% Similarity=0.428 Sum_probs=121.5
Q ss_pred CCCCCCccCccCCceEEEEEe-CCCCEEEEEEcccccccccHHHHHHHHHHHhcCC-C-----CCccceeeEEecCCeee
Q 013004 300 GFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAV-H-----RNLLRLYGFCTTVTEKL 372 (451)
Q Consensus 300 ~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~-H-----~niv~l~~~~~~~~~~~ 372 (451)
+|...++||+|+||+|.+|.. .+++.||||+++.... -..+-..|+.++..++ | -|+|++++++...++.+
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~--f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlc 264 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKR--FLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLC 264 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccChH--HHHHHHHHHHHHHHHhccCCCCCeeEEEeeecccccccee
Confidence 577889999999999999985 5699999999976432 2335678899998886 3 68999999999999999
Q ss_pred EEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCC--CCccchhh
Q 013004 373 LVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDED--ADQSSKTI 447 (451)
Q Consensus 373 lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~--~~~~i~df 447 (451)
+|+|.+.. +|+++++..... .++......++.||+.||.+||+. +|||+||||+||||.+- ..+||+||
T Consensus 265 iVfELL~~-NLYellK~n~f~--Glsl~~ir~~~~Qil~~L~~L~~l---~IIHcDLKPENILL~~~~r~~vKVIDF 335 (586)
T KOG0667|consen 265 IVFELLST-NLYELLKNNKFR--GLSLPLVRKFAQQILTALLFLHEL---GIIHCDLKPENILLKDPKRSRIKVIDF 335 (586)
T ss_pred eeehhhhh-hHHHHHHhcCCC--CCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCChhheeeccCCcCceeEEec
Confidence 99998864 999999987554 488999999999999999999999 99999999999999975 47899998
No 330
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.82 E-value=1e-19 Score=175.40 Aligned_cols=143 Identities=23% Similarity=0.414 Sum_probs=120.4
Q ss_pred cCCCCCCccCccCCceEEEEEeC-CCCEEEEEEccccccc-ccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEe
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS-GGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 376 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 376 (451)
++|+..+.||+|++|.||+|+.. +++.||+|.++..... .....+.+|+.+++.++|+||+++++++......++|||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 46788899999999999999864 6889999998643322 223468899999999999999999999999999999999
Q ss_pred cCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCC-CCccchhh
Q 013004 377 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDED-ADQSSKTI 447 (451)
Q Consensus 377 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~-~~~~i~df 447 (451)
|++ +++.+++..... ..+++.....++.|++.||+|||+. +++||||||+||+++.+ +.+|++||
T Consensus 82 ~~~-~~l~~~~~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dl~p~nill~~~~~~~kl~df 147 (294)
T PLN00009 82 YLD-LDLKKHMDSSPD--FAKNPRLIKTYLYQILRGIAYCHSH---RVLHRDLKPQNLLIDRRTNALKLADF 147 (294)
T ss_pred ccc-ccHHHHHHhCCC--CCcCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCcceEEEECCCCEEEEccc
Confidence 996 588888765432 2357888889999999999999998 99999999999999964 56799887
No 331
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.82 E-value=5.1e-20 Score=176.29 Aligned_cols=141 Identities=28% Similarity=0.446 Sum_probs=122.2
Q ss_pred CCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHHHhcCC-CCCccceeeEEecCCeeeEEEecC
Q 013004 301 FSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAV-HRNLLRLYGFCTTVTEKLLVYPYM 378 (451)
Q Consensus 301 f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lv~ey~ 378 (451)
|+..+.||+|+||+||+|+.. +++.||||++.............+|+..+.+++ |+|++++++++...+..++||||+
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM 80 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence 456688999999999999975 478999999865433223334567899999999 999999999999999999999999
Q ss_pred CCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 379 TNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 379 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+|++.+.+..... ..++|.++..++.|++.||.|||+. +++|+||||+||++++++.++++||
T Consensus 81 -~~~l~~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~dl~~~ni~i~~~~~~~l~d~ 143 (283)
T cd07830 81 -EGNLYQLMKDRKG--KPFSESVIRSIIYQILQGLAHIHKH---GFFHRDLKPENLLVSGPEVVKIADF 143 (283)
T ss_pred -CCCHHHHHHhccc--ccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCCEEEeec
Confidence 8899998876542 2479999999999999999999998 9999999999999999999999997
No 332
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.82 E-value=4.6e-20 Score=173.61 Aligned_cols=145 Identities=26% Similarity=0.361 Sum_probs=126.1
Q ss_pred CCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccc-cccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEec
Q 013004 300 GFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT-SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 377 (451)
Q Consensus 300 ~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey 377 (451)
+|+..+.||+|+||.||+++.. +++.+|+|.+..... ......+.+|+.+++.++|+||+++++++......++|+||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY 80 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence 4677789999999999999754 688999999865432 22334688999999999999999999999999999999999
Q ss_pred CCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 378 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 378 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+++++|.+++.........+++..+..++.|++.||.|||+. +++||||+|+||++++++.++++||
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~---~i~h~~l~~~ni~~~~~~~~kl~d~ 147 (256)
T cd08530 81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQ---KILHRDLKSANILLVANDLVKIGDL 147 (256)
T ss_pred cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEEecCCcEEEeec
Confidence 999999999877433334589999999999999999999998 9999999999999999999999997
No 333
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.82 E-value=6.1e-20 Score=181.36 Aligned_cols=149 Identities=23% Similarity=0.327 Sum_probs=125.0
Q ss_pred cHHHHHHHhcCCCCCCccCccCCceEEEEEe-CCCCEEEEEEcccccc-cccHHHHHHHHHHHhcCCCCCccceeeEEec
Q 013004 290 SLRELQVATDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERT-SGGELQFQTEVKIISMAVHRNLLRLYGFCTT 367 (451)
Q Consensus 290 ~~~~~~~~~~~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~ 367 (451)
...++...+++|+..+.||+|+||.||+|.. .+++.||+|+++.... ......+.+|+.++..++|+||+++++++..
T Consensus 8 ~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~ 87 (345)
T cd07877 8 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 87 (345)
T ss_pred HHHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeee
Confidence 4456677789999999999999999999985 5688999999864322 1223467889999999999999999998754
Q ss_pred C------CeeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCC
Q 013004 368 V------TEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441 (451)
Q Consensus 368 ~------~~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~ 441 (451)
. ...+++++++ +++|.+.+... .+++..+..++.|+++||+|||+. +|+||||||+||++++++.
T Consensus 88 ~~~~~~~~~~~lv~~~~-~~~L~~~~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~ 158 (345)
T cd07877 88 ARSLEEFNDVYLVTHLM-GADLNNIVKCQ-----KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCE 158 (345)
T ss_pred cccccccccEEEEehhc-ccCHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEcCCCC
Confidence 3 3467888876 78998877543 388999999999999999999999 9999999999999999999
Q ss_pred ccchhh
Q 013004 442 QSSKTI 447 (451)
Q Consensus 442 ~~i~df 447 (451)
++++||
T Consensus 159 ~kl~df 164 (345)
T cd07877 159 LKILDF 164 (345)
T ss_pred EEEecc
Confidence 999997
No 334
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.82 E-value=1.2e-19 Score=173.76 Aligned_cols=135 Identities=28% Similarity=0.377 Sum_probs=112.7
Q ss_pred ccCccCCceEEEEEe-CCCCEEEEEEccccccc--ccHHHHHHHHH---HHhcCCCCCccceeeEEecCCeeeEEEecCC
Q 013004 306 ILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTS--GGELQFQTEVK---IISMAVHRNLLRLYGFCTTVTEKLLVYPYMT 379 (451)
Q Consensus 306 ~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~--~~~~~~~~E~~---~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~ 379 (451)
+||+|+||.||+|+. .+++.||+|.+...... .....+..|.. .+....||+|+++++++.+.+..++|+||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 489999999999986 45889999998653322 11222444443 3445679999999999999999999999999
Q ss_pred CCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 380 NGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 380 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+|+|.+++.... .++|..+..++.|++.|+.|||+. +|+||||||+||++++++.++++||
T Consensus 81 g~~L~~~l~~~~----~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~nili~~~~~~kl~df 141 (278)
T cd05606 81 GGDLHYHLSQHG----VFSEAEMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDL 141 (278)
T ss_pred CCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CEEcCCCCHHHEEECCCCCEEEccC
Confidence 999998886542 489999999999999999999998 9999999999999999999999998
No 335
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=99.82 E-value=9.6e-21 Score=199.76 Aligned_cols=146 Identities=25% Similarity=0.383 Sum_probs=117.6
Q ss_pred HHhcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecC------
Q 013004 296 VATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTV------ 368 (451)
Q Consensus 296 ~~~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~------ 368 (451)
....+|+..++||+||||.||+++-+ ||+.||||++....+........+|+.++++++|||||+++..|.+.
T Consensus 476 RY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~ 555 (1351)
T KOG1035|consen 476 RYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTV 555 (1351)
T ss_pred hHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccc
Confidence 45577999999999999999999854 89999999997654333344688999999999999999998764110
Q ss_pred --------------------------------------------------------------------------------
Q 013004 369 -------------------------------------------------------------------------------- 368 (451)
Q Consensus 369 -------------------------------------------------------------------------------- 368 (451)
T Consensus 556 ~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~ 635 (1351)
T KOG1035|consen 556 LEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSD 635 (1351)
T ss_pred ccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccc
Confidence
Q ss_pred ---------------------------------CeeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHh
Q 013004 369 ---------------------------------TEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSY 415 (451)
Q Consensus 369 ---------------------------------~~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~y 415 (451)
..+|+.||||+.-.+.++++..... -.-....++.++|++||.|
T Consensus 636 ~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~---~~~d~~wrLFreIlEGLaY 712 (1351)
T KOG1035|consen 636 SEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFN---SQRDEAWRLFREILEGLAY 712 (1351)
T ss_pred cCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccc---hhhHHHHHHHHHHHHHHHH
Confidence 0136778888887777776654321 0345677899999999999
Q ss_pred HhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 416 LHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 416 LH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+|++ +||||||||.||++|++..+||+||
T Consensus 713 IH~~---giIHRDLKP~NIFLd~~~~VKIGDF 741 (1351)
T KOG1035|consen 713 IHDQ---GIIHRDLKPRNIFLDSRNSVKIGDF 741 (1351)
T ss_pred HHhC---ceeeccCCcceeEEcCCCCeeeccc
Confidence 9999 9999999999999999999999998
No 336
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=99.82 E-value=1.1e-19 Score=177.15 Aligned_cols=136 Identities=24% Similarity=0.366 Sum_probs=111.3
Q ss_pred CccCccCCceEEEEEeC---CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEec--CCeeeEEEecCC
Q 013004 305 NILGRGGFGKVYKGRLA---DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTT--VTEKLLVYPYMT 379 (451)
Q Consensus 305 ~~lG~G~fg~Vy~~~~~---~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~--~~~~~lv~ey~~ 379 (451)
..||+|+||+||+|+.. ++..||+|.++... ....+.+|+.+++.++||||+++++++.. ....++++||+.
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG---ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE 83 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCCC---CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC
Confidence 57999999999999864 35789999885432 22357899999999999999999998854 456799999987
Q ss_pred CCChhHHhhccC-----CCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceee----CCCCCccchhh
Q 013004 380 NGSVASRLRERQ-----SSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILL----DEDADQSSKTI 447 (451)
Q Consensus 380 ~gsL~~~l~~~~-----~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILl----d~~~~~~i~df 447 (451)
+ +|.+++.... .....+++..+..++.|++.||.|||+. +|+||||||+|||+ ++++.+||+||
T Consensus 84 ~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~kl~Df 156 (317)
T cd07867 84 H-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADM 156 (317)
T ss_pred C-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEccCCCCCCcEEEeec
Confidence 5 7777765321 1123478899999999999999999998 99999999999999 45678999997
No 337
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=99.82 E-value=1.6e-19 Score=168.97 Aligned_cols=141 Identities=33% Similarity=0.518 Sum_probs=125.8
Q ss_pred CCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEecC
Q 013004 300 GFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYM 378 (451)
Q Consensus 300 ~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~ 378 (451)
+|+..+.||+|++|.||++... +++.+++|+++.... .....+.+|++.++.++|+|++++++++......++++||+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~ 79 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK-EKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFC 79 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch-hHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecC
Confidence 4677789999999999999975 688999999865433 23457899999999999999999999999999999999999
Q ss_pred CCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 379 TNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 379 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
++++|.+++.... ..+++.....++.|++.|+.|||+. +++||||+|+||++++++.+++.||
T Consensus 80 ~~~~L~~~~~~~~---~~~~~~~~~~i~~~i~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~ 142 (253)
T cd05122 80 SGGSLKDLLKSTN---QTLTESQIAYVCKELLKGLEYLHSN---GIIHRDIKAANILLTSDGEVKLIDF 142 (253)
T ss_pred CCCcHHHHHhhcC---CCCCHHHHHHHHHHHHHHHHHhhcC---CEecCCCCHHHEEEccCCeEEEeec
Confidence 9999999987653 2489999999999999999999998 9999999999999999999999987
No 338
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.82 E-value=9.2e-20 Score=174.58 Aligned_cols=140 Identities=29% Similarity=0.481 Sum_probs=121.5
Q ss_pred CCCCCccCccCCceEEEEEeC-CCCEEEEEEccccc-ccccHHHHHHHHHHHhcCCCCCccceeeEEecC--CeeeEEEe
Q 013004 301 FSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEER-TSGGELQFQTEVKIISMAVHRNLLRLYGFCTTV--TEKLLVYP 376 (451)
Q Consensus 301 f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~lv~e 376 (451)
|+..+.||+|+||.||+|... +++.+|+|.++... .......+.+|+.+++.++|+|++++++++... +..++|+|
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 456688999999999999875 47899999997653 122234688999999999999999999999887 78999999
Q ss_pred cCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 377 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 377 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|+++ +|.+++.... ..+++..+..++.|+++||+|||+. +++|+||||+||++++++.++++||
T Consensus 81 ~~~~-~l~~~~~~~~---~~~~~~~~~~i~~~i~~al~~LH~~---~~~h~dl~p~nil~~~~~~~~l~d~ 144 (287)
T cd07840 81 YMDH-DLTGLLDSPE---VKFTESQIKCYMKQLLEGLQYLHSN---GILHRDIKGSNILINNDGVLKLADF 144 (287)
T ss_pred cccc-cHHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEEcCCCCEEEccc
Confidence 9974 8888886542 2489999999999999999999998 9999999999999999999999997
No 339
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.82 E-value=2.5e-21 Score=191.28 Aligned_cols=139 Identities=26% Similarity=0.355 Sum_probs=119.9
Q ss_pred CCCCccCccCCceEEEEEeCC-CCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEecCCC
Q 013004 302 SNKNILGRGGFGKVYKGRLAD-GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTN 380 (451)
Q Consensus 302 ~~~~~lG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~ 380 (451)
..+..||.|+||+||+|..++ +-..|-|.+... +.....+|+-|+++++.++||+||+|++.|...+.+|+..|||.|
T Consensus 35 eIiGELGDGAFGKVyKA~nket~~lAAaKvIetk-seEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~G 113 (1187)
T KOG0579|consen 35 EIIGELGDGAFGKVYKAVNKETKLLAAAKVIETK-SEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCGG 113 (1187)
T ss_pred HHHhhhcCccchhhhhhhcccchhhhhhhhhccc-chhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecCC
Confidence 344568999999999998654 445567776332 233445799999999999999999999999989999999999999
Q ss_pred CChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 381 GSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 381 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|-....+-+-. ..++.++...+++|++.||.|||++ +|||||||+.|||++-||+++++||
T Consensus 114 GAVDaimlEL~---r~LtE~QIqvvc~q~ldALn~LHs~---~iIHRDLKAGNiL~TldGdirLADF 174 (1187)
T KOG0579|consen 114 GAVDAIMLELG---RVLTEDQIQVVCYQVLDALNWLHSQ---NIIHRDLKAGNILLTLDGDIRLADF 174 (1187)
T ss_pred chHhHHHHHhc---cccchHHHHHHHHHHHHHHHHHhhc---chhhhhccccceEEEecCcEeeecc
Confidence 99988887654 3589999999999999999999999 9999999999999999999999998
No 340
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.82 E-value=1.5e-19 Score=176.32 Aligned_cols=140 Identities=31% Similarity=0.471 Sum_probs=120.4
Q ss_pred CCCCCccCccCCceEEEEEeC-CCCEEEEEEccccccc--ccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEec
Q 013004 301 FSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS--GGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 377 (451)
Q Consensus 301 f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey 377 (451)
|+..+.||+|+||.||+|+.. +++.||+|.+...... .....+.+|+.+++.++|+|++++++++.+....++||||
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 106 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEY 106 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeC
Confidence 556788999999999999864 6889999998643222 2234688999999999999999999999999999999999
Q ss_pred CCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 378 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 378 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+. |++.+.+.... ..++|.++..++.|++.|+.|||+. +|+||||+|+||+++.++.++++||
T Consensus 107 ~~-g~l~~~~~~~~---~~l~~~~~~~i~~~i~~~l~~lH~~---~i~H~dL~p~Nil~~~~~~~kl~df 169 (317)
T cd06635 107 CL-GSASDLLEVHK---KPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADF 169 (317)
T ss_pred CC-CCHHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcccEEECCCCCEEEecC
Confidence 97 57877775432 2489999999999999999999998 9999999999999999999999997
No 341
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.82 E-value=7.4e-20 Score=178.11 Aligned_cols=136 Identities=24% Similarity=0.241 Sum_probs=113.5
Q ss_pred cCccCCceEEEEEeCCCCEEEEEEccccc-ccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEecCCCCChhH
Q 013004 307 LGRGGFGKVYKGRLADGKLVAVKRLKEER-TSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVAS 385 (451)
Q Consensus 307 lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~gsL~~ 385 (451)
+|.|+++.||++.. +++.||||+++... .......+.+|+.+++.++|+||+++++++...+..+++|||+++|+|.+
T Consensus 10 ~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 88 (314)
T cd08216 10 FEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCED 88 (314)
T ss_pred hcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHHH
Confidence 34444444444444 68999999986542 23334578999999999999999999999999999999999999999999
Q ss_pred HhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhhh
Q 013004 386 RLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 448 (451)
Q Consensus 386 ~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df~ 448 (451)
++..... ..+++.....++.|+++||+|||+. +|+||||||+||+++.++.++++||-
T Consensus 89 ~l~~~~~--~~~~~~~~~~~~~~l~~~L~~LH~~---~ivH~dlk~~Nili~~~~~~kl~d~~ 146 (314)
T cd08216 89 LLKTHFP--EGLPELAIAFILKDVLNALDYIHSK---GFIHRSVKASHILLSGDGKVVLSGLR 146 (314)
T ss_pred HHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCcceEEEecCCceEEecCc
Confidence 9986432 2378889999999999999999999 99999999999999999999999974
No 342
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.82 E-value=1.1e-19 Score=174.06 Aligned_cols=141 Identities=24% Similarity=0.447 Sum_probs=122.5
Q ss_pred CCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccc-cHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEecC
Q 013004 301 FSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYM 378 (451)
Q Consensus 301 f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~ 378 (451)
|+..+.||+|++|.||+|... +|+.||+|++....... ....+.+|+..++.++|+|++++++++.+.+..+++|||+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~ 80 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL 80 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence 456788999999999999864 68999999986543222 2346889999999999999999999999999999999999
Q ss_pred CCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 379 TNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 379 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+ ++|.+++..... ..+++..+..++.|+++||+|||+. +++||||+|+||++++++.++++||
T Consensus 81 ~-~~l~~~~~~~~~--~~~~~~~~~~~~~~i~~~L~~lH~~---~~~H~dl~p~nil~~~~~~~~l~df 143 (283)
T cd07835 81 D-LDLKKYMDSSPL--TGLDPPLIKSYLYQLLQGIAYCHSH---RVLHRDLKPQNLLIDREGALKLADF 143 (283)
T ss_pred C-cCHHHHHhhCCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCcEEEeec
Confidence 5 689998876432 2489999999999999999999998 9999999999999999999999997
No 343
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.81 E-value=7.8e-20 Score=175.70 Aligned_cols=141 Identities=28% Similarity=0.345 Sum_probs=121.2
Q ss_pred CCCCCCccCccCCceEEEEEe----CCCCEEEEEEcccccc---cccHHHHHHHHHHHhcC-CCCCccceeeEEecCCee
Q 013004 300 GFSNKNILGRGGFGKVYKGRL----ADGKLVAVKRLKEERT---SGGELQFQTEVKIISMA-VHRNLLRLYGFCTTVTEK 371 (451)
Q Consensus 300 ~f~~~~~lG~G~fg~Vy~~~~----~~~~~vAvK~~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~ 371 (451)
+|+..+.||+|+||.||+++. .+++.||||.++.... ......+.+|+.++..+ +|+||+++++.+......
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 356678899999999999974 2568899999864321 11233578999999999 599999999999999999
Q ss_pred eEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 372 LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 372 ~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
++||||+++|+|.+++.... .+++.....++.|+++||.|||+. +++||||||+||+++.++.++++||
T Consensus 81 ~lv~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~ql~~~l~~lH~~---~~~H~dl~p~nil~~~~~~~~l~df 149 (288)
T cd05583 81 HLILDYVNGGELFTHLYQRE----HFTESEVRVYIAEIVLALDHLHQL---GIIYRDIKLENILLDSEGHVVLTDF 149 (288)
T ss_pred EEEEecCCCCcHHHHHhhcC----CcCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEEEC
Confidence 99999999999999987543 378899999999999999999998 9999999999999999999999998
No 344
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.81 E-value=1.7e-19 Score=169.59 Aligned_cols=141 Identities=32% Similarity=0.499 Sum_probs=125.3
Q ss_pred CCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccc-cccHHHHHHHHHHHhcCCCCCccceeeEEecC--CeeeEEE
Q 013004 300 GFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT-SGGELQFQTEVKIISMAVHRNLLRLYGFCTTV--TEKLLVY 375 (451)
Q Consensus 300 ~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~lv~ 375 (451)
+|+..+.||+|++|.||+|... +++.|++|.+..... ......+.+|+..+++++|+||+++++.+... ...++++
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 3667789999999999999975 688999999865432 12345789999999999999999999999888 8899999
Q ss_pred ecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 376 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 376 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
||+++++|.+++.... .+++.++..++.|++.|++|||+. +++|+|++|+||+++.++.++++||
T Consensus 81 e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~l~~~l~~lh~~---~~~h~dl~p~ni~i~~~~~~~l~d~ 145 (260)
T cd06606 81 EYVSGGSLSSLLKKFG----KLPEPVIRKYTRQILEGLAYLHSN---GIVHRDIKGANILVDSDGVVKLADF 145 (260)
T ss_pred EecCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEccc
Confidence 9999999999997653 489999999999999999999998 9999999999999999999999997
No 345
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=99.81 E-value=5.8e-20 Score=180.63 Aligned_cols=141 Identities=23% Similarity=0.376 Sum_probs=120.7
Q ss_pred cCCCCCCccCccCCceEEEEEeC-CCCEEEEEEccccccc-ccHHHHHHHHHHHhcCCCCCccceeeEEec----CCeee
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS-GGELQFQTEVKIISMAVHRNLLRLYGFCTT----VTEKL 372 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~----~~~~~ 372 (451)
++|+..+.||+|+||.||+|... +++.||+|++...... .....+.+|+.++..++||||+++++++.. ....+
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 84 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVY 84 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEE
Confidence 67888899999999999999864 6899999998654322 223467889999999999999999988753 34689
Q ss_pred EEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 373 LVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 373 lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+|+||+. |+|.+++.... .+++.....++.|++.||.|||+. +|+||||||+||++++++.++++||
T Consensus 85 lv~e~~~-~~l~~~~~~~~----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~df 151 (334)
T cd07855 85 VVMDLME-SDLHHIIHSDQ----PLTEEHIRYFLYQLLRGLKYIHSA---NVIHRDLKPSNLLVNEDCELRIGDF 151 (334)
T ss_pred EEEehhh-hhHHHHhccCC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEeccc
Confidence 9999996 68988886542 389999999999999999999998 9999999999999999999999997
No 346
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.81 E-value=1.7e-19 Score=173.30 Aligned_cols=138 Identities=24% Similarity=0.374 Sum_probs=121.7
Q ss_pred CCCCCccCccCCceEEEEEe-CCCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEecCC
Q 013004 301 FSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMT 379 (451)
Q Consensus 301 f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~ 379 (451)
|...+.||+|++|.||++.. .+++.+|+|+++... ......+.+|+.++..++|+||+++++++...+..++++||++
T Consensus 21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~ 99 (285)
T cd06648 21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRK-QQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLE 99 (285)
T ss_pred hhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccc-hhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccC
Confidence 44557899999999999986 468899999885332 2223468899999999999999999999999999999999999
Q ss_pred CCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 380 NGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 380 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+++|.+++... .+++.+...++.|++.||+|||+. +|+||||||+||++++++.++++||
T Consensus 100 ~~~L~~~~~~~-----~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~d~ 159 (285)
T cd06648 100 GGALTDIVTHT-----RMNEEQIATVCLAVLKALSFLHAQ---GVIHRDIKSDSILLTSDGRVKLSDF 159 (285)
T ss_pred CCCHHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChhhEEEcCCCcEEEccc
Confidence 99999998762 378999999999999999999999 9999999999999999999999998
No 347
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.81 E-value=1.8e-19 Score=170.33 Aligned_cols=136 Identities=25% Similarity=0.356 Sum_probs=114.1
Q ss_pred CccCccCCceEEEEEeC-CCCEEEEEEcccccc--cccHHHHHHHHHHH-hcCCCCCccceeeEEecCCeeeEEEecCCC
Q 013004 305 NILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVKII-SMAVHRNLLRLYGFCTTVTEKLLVYPYMTN 380 (451)
Q Consensus 305 ~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~~E~~~l-~~l~H~niv~l~~~~~~~~~~~lv~ey~~~ 380 (451)
+.||+|+||.||+|... +++.||||.++.... ......+..|...+ ...+|+|++++++++...+..++++||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 46899999999999864 588999999864321 11122344554443 455899999999999999999999999999
Q ss_pred CChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 381 GSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 381 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
++|.+++.... .+++..+..++.|++.||.|||+. +++||||+|+||++++++.++++||
T Consensus 82 ~~L~~~l~~~~----~~~~~~~~~i~~qi~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~df 141 (260)
T cd05611 82 GDCASLIKTLG----GLPEDWAKQYIAEVVLGVEDLHQR---GIIHRDIKPENLLIDQTGHLKLTDF 141 (260)
T ss_pred CCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEeec
Confidence 99999997643 378899999999999999999998 9999999999999999999999998
No 348
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.81 E-value=1.3e-19 Score=174.94 Aligned_cols=143 Identities=25% Similarity=0.458 Sum_probs=119.6
Q ss_pred hcCCCCCCccCccCCceEEEEEeCC-CCEEEEEEcccccccccHHHHHHHHHHHhcCC-CCCccceeeEEecCCeeeEEE
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLAD-GKLVAVKRLKEERTSGGELQFQTEVKIISMAV-HRNLLRLYGFCTTVTEKLLVY 375 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lv~ 375 (451)
.++|+..+.||+|+||+||+|...+ ++.||||.++..........+.+|+..+.+.. |+||+++++++.+....+++|
T Consensus 14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~ 93 (296)
T cd06618 14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICM 93 (296)
T ss_pred cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEe
Confidence 4567888999999999999999864 88999999865433333345677777666665 999999999999999999999
Q ss_pred ecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhc-CCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 376 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHE-HCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 376 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~-~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
||+. +++......... .+++..+..++.|++.|++|||+ . +|+||||+|+||++++++.++|+||
T Consensus 94 e~~~-~~l~~l~~~~~~---~l~~~~~~~i~~~i~~~l~~lH~~~---~i~H~dl~p~nill~~~~~~kL~df 159 (296)
T cd06618 94 ELMS-TCLDKLLKRIQG---PIPEDILGKMTVAIVKALHYLKEKH---GVIHRDVKPSNILLDASGNVKLCDF 159 (296)
T ss_pred eccC-cCHHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhhC---CEecCCCcHHHEEEcCCCCEEECcc
Confidence 9985 477666654322 48999999999999999999997 4 8999999999999999999999998
No 349
>PTZ00284 protein kinase; Provisional
Probab=99.81 E-value=5.4e-20 Score=189.11 Aligned_cols=144 Identities=19% Similarity=0.327 Sum_probs=113.7
Q ss_pred HHHHhcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHHHhcCC------CCCccceeeEEe
Q 013004 294 LQVATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAV------HRNLLRLYGFCT 366 (451)
Q Consensus 294 ~~~~~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~------H~niv~l~~~~~ 366 (451)
+....++|+..+.||+|+||+||+|... +++.||||+++.... ....+..|+.++..++ |.+++++++++.
T Consensus 124 ~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~--~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~ 201 (467)
T PTZ00284 124 IDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPK--YTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQ 201 (467)
T ss_pred cccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchh--hHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEE
Confidence 3445678999999999999999999864 578999999864221 1223455666655554 456888988887
Q ss_pred cC-CeeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhc-CCCCCeeecCCCCCceeeCCCC----
Q 013004 367 TV-TEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHE-HCDPKIIHRDVKAANILLDEDA---- 440 (451)
Q Consensus 367 ~~-~~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~-~~~~~iiHrDlK~~NILld~~~---- 440 (451)
.. ...++|||++ +++|.+++.+.. .+++..+..|+.|++.||+|||+ . +||||||||+|||++.++
T Consensus 202 ~~~~~~~iv~~~~-g~~l~~~l~~~~----~l~~~~~~~i~~qi~~aL~yLH~~~---gIiHrDlKP~NILl~~~~~~~~ 273 (467)
T PTZ00284 202 NETGHMCIVMPKY-GPCLLDWIMKHG----PFSHRHLAQIIFQTGVALDYFHTEL---HLMHTDLKPENILMETSDTVVD 273 (467)
T ss_pred cCCceEEEEEecc-CCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEecCCcccc
Confidence 64 4688999988 778998887643 38999999999999999999997 5 899999999999999775
Q ss_pred ------------Cccchhh
Q 013004 441 ------------DQSSKTI 447 (451)
Q Consensus 441 ------------~~~i~df 447 (451)
.+||+||
T Consensus 274 ~~~~~~~~~~~~~vkl~Df 292 (467)
T PTZ00284 274 PVTNRALPPDPCRVRICDL 292 (467)
T ss_pred cccccccCCCCceEEECCC
Confidence 3788887
No 350
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.81 E-value=1.1e-19 Score=178.95 Aligned_cols=142 Identities=23% Similarity=0.387 Sum_probs=120.6
Q ss_pred HhcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccc-cccHHHHHHHHHHHhcC-CCCCccceeeEEecC--Cee
Q 013004 297 ATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT-SGGELQFQTEVKIISMA-VHRNLLRLYGFCTTV--TEK 371 (451)
Q Consensus 297 ~~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~--~~~ 371 (451)
..++|+..+.||+|+||.||+|... +++.+|||++..... ......+.+|+.++..+ +|+||+++++++... ...
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 84 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI 84 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence 3467888899999999999999875 588999998854321 12233577899999999 999999999988653 368
Q ss_pred eEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 372 LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 372 ~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
++||||+. ++|..++... .++|..+..++.|++.||+|||+. +|+||||||+||+++.++.++++||
T Consensus 85 ~lv~e~~~-~~L~~~~~~~-----~~~~~~~~~i~~qi~~~L~~LH~~---~i~H~dl~p~nill~~~~~~kl~d~ 151 (337)
T cd07852 85 YLVFEYME-TDLHAVIRAN-----ILEDVHKRYIMYQLLKALKYIHSG---NVIHRDLKPSNILLNSDCRVKLADF 151 (337)
T ss_pred EEEecccc-cCHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeec
Confidence 99999997 5998888653 378999999999999999999998 9999999999999999999999997
No 351
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.81 E-value=1.1e-19 Score=178.14 Aligned_cols=145 Identities=24% Similarity=0.381 Sum_probs=123.0
Q ss_pred HHHHhcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccc-cccHHHHHHHHHHHhcCCCCCccceeeEEec-CCe
Q 013004 294 LQVATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT-SGGELQFQTEVKIISMAVHRNLLRLYGFCTT-VTE 370 (451)
Q Consensus 294 ~~~~~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~-~~~ 370 (451)
+...+++|+..+.||+|+||.||+|+.. +++.||+|++..... ......+.+|+.++..++||||+++.+++.. ...
T Consensus 5 ~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 84 (328)
T cd07856 5 VFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLED 84 (328)
T ss_pred eeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCc
Confidence 3446778999999999999999999854 789999998854322 2233467889999999999999999998876 557
Q ss_pred eeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 371 KLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 371 ~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
.++++||+ +++|.+.+... .+++.....++.|+++||.|||+. +|+||||||+||++++++.++++||
T Consensus 85 ~~lv~e~~-~~~L~~~~~~~-----~~~~~~~~~~~~ql~~aL~~LH~~---~iiH~dl~p~Nili~~~~~~~l~df 152 (328)
T cd07856 85 IYFVTELL-GTDLHRLLTSR-----PLEKQFIQYFLYQILRGLKYVHSA---GVVHRDLKPSNILINENCDLKICDF 152 (328)
T ss_pred EEEEeehh-ccCHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEeECCCCCEEeCcc
Confidence 89999998 56888887643 367888889999999999999998 9999999999999999999999998
No 352
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.81 E-value=8.8e-20 Score=186.06 Aligned_cols=148 Identities=22% Similarity=0.345 Sum_probs=115.0
Q ss_pred HhcCCCCCCccCccCCceEEEEEe-----------------CCCCEEEEEEcccccccc-------------cHHHHHHH
Q 013004 297 ATDGFSNKNILGRGGFGKVYKGRL-----------------ADGKLVAVKRLKEERTSG-------------GELQFQTE 346 (451)
Q Consensus 297 ~~~~f~~~~~lG~G~fg~Vy~~~~-----------------~~~~~vAvK~~~~~~~~~-------------~~~~~~~E 346 (451)
..++|+..++||+|+||.||+|.+ ..++.||||+++...... ....+..|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 467899999999999999999964 234679999986432110 11124457
Q ss_pred HHHHhcCCCCCc-----cceeeEEec--------CCeeeEEEecCCCCChhHHhhccCCC--------------------
Q 013004 347 VKIISMAVHRNL-----LRLYGFCTT--------VTEKLLVYPYMTNGSVASRLRERQSS-------------------- 393 (451)
Q Consensus 347 ~~~l~~l~H~ni-----v~l~~~~~~--------~~~~~lv~ey~~~gsL~~~l~~~~~~-------------------- 393 (451)
+.++.+++|.++ ++++++|.. ..+.++||||+++|+|.++++.....
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 777777776654 677777653 35689999999999999998753210
Q ss_pred CCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 394 LPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 394 ~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
...++|..+..++.|++.||.|+|+. +|+||||||+|||++.++.+|++||
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH~~---~ivHrDLKp~NILl~~~~~~kL~DF 353 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLHRI---GIVHRDIKPENLLVTVDGQVKIIDF 353 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCchHhEEECCCCcEEEEeC
Confidence 12357888999999999999999998 9999999999999999999999998
No 353
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.81 E-value=1.6e-19 Score=174.23 Aligned_cols=134 Identities=25% Similarity=0.391 Sum_probs=118.7
Q ss_pred CccCccCCceEEEEEe-CCCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEecCCCCCh
Q 013004 305 NILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSV 383 (451)
Q Consensus 305 ~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~gsL 383 (451)
..||+|+||.||++.. .+++.||||.+.... ......+.+|+.+++.++|+||+++++++...+..+++|||+++++|
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 104 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRK-QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 104 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccc-hhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcH
Confidence 5699999999999986 468899999875322 22344688999999999999999999999999999999999999999
Q ss_pred hHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 384 ASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 384 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
.+++... .+++.....++.|++.|++|||+. +++||||||+||++++++.++++||
T Consensus 105 ~~~~~~~-----~~~~~~~~~~~~ql~~~l~~lH~~---givH~dl~p~Nilv~~~~~~~l~df 160 (292)
T cd06657 105 TDIVTHT-----RMNEEQIAAVCLAVLKALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDF 160 (292)
T ss_pred HHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEccc
Confidence 9887542 378999999999999999999998 9999999999999999999999997
No 354
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.81 E-value=1.6e-19 Score=178.90 Aligned_cols=141 Identities=23% Similarity=0.324 Sum_probs=119.4
Q ss_pred HhcCCCCCCccCccCCceEEEEEe-CCCCEEEEEEcccccc-cccHHHHHHHHHHHhcCCCCCccceeeEEecC------
Q 013004 297 ATDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERT-SGGELQFQTEVKIISMAVHRNLLRLYGFCTTV------ 368 (451)
Q Consensus 297 ~~~~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~------ 368 (451)
..++|+..+.||+|+||.||+|+. .+++.||+|.+..... ......+.+|+.++..++|+||+++++++...
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 346788899999999999999986 4689999999864322 22234677899999999999999999988643
Q ss_pred CeeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 369 TEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 369 ~~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
...++||||+. ++|.+.+... +++.....++.|++.||+|||+. +|+||||||+||+++.++.++++||
T Consensus 94 ~~~~lv~e~~~-~~l~~~~~~~------l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nil~~~~~~~kL~Df 162 (353)
T cd07850 94 QDVYLVMELMD-ANLCQVIQMD------LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDF 162 (353)
T ss_pred CcEEEEEeccC-CCHHHHHhhc------CCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccC
Confidence 34699999996 5888777532 78889999999999999999998 9999999999999999999999998
No 355
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.81 E-value=1.2e-19 Score=174.34 Aligned_cols=144 Identities=26% Similarity=0.383 Sum_probs=118.0
Q ss_pred cCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHHHhcCC-CCCccceeeEEecCCeeeEEEe
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAV-HRNLLRLYGFCTTVTEKLLVYP 376 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lv~e 376 (451)
++|+..+.||+|+||.||++... +++.||+|.+...........+.+|+.++.++. |+||+++++++...+..+++||
T Consensus 4 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e 83 (288)
T cd06616 4 EDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICME 83 (288)
T ss_pred HHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEe
Confidence 34556678999999999999864 589999999865433333457889999999996 9999999999999899999999
Q ss_pred cCCCCChhHHh---hccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 377 YMTNGSVASRL---RERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 377 y~~~gsL~~~l---~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|+.. ++.++. .... ...+++.....++.+++.||+|||+.. +|+||||||+||+++.++.++++||
T Consensus 84 ~~~~-~l~~l~~~~~~~~--~~~l~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~df 152 (288)
T cd06616 84 LMDI-SLDKFYKYVYEVL--KSVIPEEILGKIAVATVKALNYLKEEL--KIIHRDVKPSNILLDRNGNIKLCDF 152 (288)
T ss_pred cccC-CHHHHHHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHhhcC--CeeccCCCHHHEEEccCCcEEEeec
Confidence 9864 554433 2211 134889999999999999999999632 8999999999999999999999998
No 356
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.81 E-value=4.3e-19 Score=168.85 Aligned_cols=142 Identities=27% Similarity=0.326 Sum_probs=116.0
Q ss_pred HHHHHhcCCCCCCcc--CccCCceEEEEEe-CCCCEEEEEEcccccccccHHHHHHHHHHHh-cCCCCCccceeeEEecC
Q 013004 293 ELQVATDGFSNKNIL--GRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIIS-MAVHRNLLRLYGFCTTV 368 (451)
Q Consensus 293 ~~~~~~~~f~~~~~l--G~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~-~l~H~niv~l~~~~~~~ 368 (451)
+.....++|+..+.+ |+|+||.||+++. .+++.+|+|.++...... . |+.... ..+|+||+++++++...
T Consensus 8 ~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~----~--e~~~~~~~~~h~~iv~~~~~~~~~ 81 (267)
T PHA03390 8 ELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA----I--EPMVHQLMKDNPNFIKLYYSVTTL 81 (267)
T ss_pred HHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch----h--hHHHHHHhhcCCCEEEEEEEEecC
Confidence 334445666666666 9999999999986 467889999885432211 1 222222 12699999999999999
Q ss_pred CeeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCC-Cccchhh
Q 013004 369 TEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDA-DQSSKTI 447 (451)
Q Consensus 369 ~~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~-~~~i~df 447 (451)
+..++||||+++|+|.+++.... .++|.++..++.|+++|+.|||+. +++||||||+||+++.++ .++++||
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~~~----~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~l~df 154 (267)
T PHA03390 82 KGHVLIMDYIKDGDLFDLLKKEG----KLSEAEVKKIIRQLVEALNDLHKH---NIIHNDIKLENVLYDRAKDRIYLCDY 154 (267)
T ss_pred CeeEEEEEcCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEeCCCCeEEEecC
Confidence 99999999999999999997653 489999999999999999999998 899999999999999998 8999997
No 357
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.80 E-value=2.4e-19 Score=161.71 Aligned_cols=134 Identities=17% Similarity=0.191 Sum_probs=104.0
Q ss_pred CCccCccCCceEEEEEeCCCCEEEEEEcccccccc--------------------c-----HHHHHHHHHHHhcCCCCCc
Q 013004 304 KNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSG--------------------G-----ELQFQTEVKIISMAVHRNL 358 (451)
Q Consensus 304 ~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~--------------------~-----~~~~~~E~~~l~~l~H~ni 358 (451)
.+.||+|+||+||+|+..+|+.||||+++...... . ...+.+|...+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 36799999999999997789999999987542110 0 1124578899999999987
Q ss_pred cceeeEEecCCeeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhc-CCCCCeeecCCCCCceeeC
Q 013004 359 LRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHE-HCDPKIIHRDVKAANILLD 437 (451)
Q Consensus 359 v~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~-~~~~~iiHrDlK~~NILld 437 (451)
.....+... ..++||||++++++....... ..++..+...++.|++.++.|+|+ . +|+||||||+||+++
T Consensus 82 ~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~~----~~~~~~~~~~i~~~l~~~l~~lH~~~---givHrDlkP~NIll~ 152 (190)
T cd05145 82 PVPEPILLK--KNVLVMEFIGDDGSPAPRLKD----VPLEEEEAEELYEQVVEQMRRLYQEA---GLVHGDLSEYNILYH 152 (190)
T ss_pred CCceEEEec--CCEEEEEEecCCCchhhhhhh----ccCCHHHHHHHHHHHHHHHHHHHHhC---CEecCCCChhhEEEE
Confidence 554444333 248999999988654432222 136778889999999999999999 8 999999999999999
Q ss_pred CCCCccchhh
Q 013004 438 EDADQSSKTI 447 (451)
Q Consensus 438 ~~~~~~i~df 447 (451)
++.++++||
T Consensus 153 -~~~~~liDF 161 (190)
T cd05145 153 -DGKPYIIDV 161 (190)
T ss_pred -CCCEEEEEc
Confidence 788999997
No 358
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.80 E-value=7.3e-20 Score=189.32 Aligned_cols=147 Identities=19% Similarity=0.252 Sum_probs=113.1
Q ss_pred HhcCCCCCCccCccCCceEEEEEeCC--CCEEEEEEc--------------ccc--cccccHHHHHHHHHHHhcCCCCCc
Q 013004 297 ATDGFSNKNILGRGGFGKVYKGRLAD--GKLVAVKRL--------------KEE--RTSGGELQFQTEVKIISMAVHRNL 358 (451)
Q Consensus 297 ~~~~f~~~~~lG~G~fg~Vy~~~~~~--~~~vAvK~~--------------~~~--~~~~~~~~~~~E~~~l~~l~H~ni 358 (451)
..++|...+.||+|+||+||+|..+. +..++.|.+ ... ........+.+|+.++..++|+||
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI 225 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI 225 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence 45789999999999999999987532 222222211 000 011122358899999999999999
Q ss_pred cceeeEEecCCeeeEEEecCCCCChhHHhhccCCC-CCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeC
Q 013004 359 LRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSS-LPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLD 437 (451)
Q Consensus 359 v~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~-~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld 437 (451)
|++++++...+..++++|++. +++.+++...... .......+...++.|++.||.|||++ +|+||||||+|||++
T Consensus 226 v~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~---gIiHrDLKP~NILl~ 301 (501)
T PHA03210 226 LKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDK---KLIHRDIKLENIFLN 301 (501)
T ss_pred CcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEC
Confidence 999999999999999999985 5777776543211 11233556778999999999999998 999999999999999
Q ss_pred CCCCccchhh
Q 013004 438 EDADQSSKTI 447 (451)
Q Consensus 438 ~~~~~~i~df 447 (451)
.++.+||+||
T Consensus 302 ~~~~vkL~DF 311 (501)
T PHA03210 302 CDGKIVLGDF 311 (501)
T ss_pred CCCCEEEEeC
Confidence 9999999998
No 359
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.80 E-value=2.8e-19 Score=175.83 Aligned_cols=137 Identities=27% Similarity=0.325 Sum_probs=118.1
Q ss_pred CCCccCccCCceEEEEEeC-CCCEEEEEEcccccccc-------------cHHHHHHHHHHHhcCCCCCccceeeEEecC
Q 013004 303 NKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSG-------------GELQFQTEVKIISMAVHRNLLRLYGFCTTV 368 (451)
Q Consensus 303 ~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~-------------~~~~~~~E~~~l~~l~H~niv~l~~~~~~~ 368 (451)
..+.||+|+||+||+|+.. +++.||||.++...... ....+.+|+.++..++|+||+++++++...
T Consensus 13 ~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 92 (335)
T PTZ00024 13 KGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVYVEG 92 (335)
T ss_pred hhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEEEecC
Confidence 3467999999999999864 68999999885432211 012477899999999999999999999999
Q ss_pred CeeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 369 TEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 369 ~~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+..+++|||+. |+|.+++.... .+++.....++.|++.||+|||+. +|+||||||+||+++.++.++++||
T Consensus 93 ~~~~lv~e~~~-~~l~~~l~~~~----~~~~~~~~~~~~ql~~aL~~LH~~---~i~H~dl~~~nill~~~~~~kl~df 163 (335)
T PTZ00024 93 DFINLVMDIMA-SDLKKVVDRKI----RLTESQVKCILLQILNGLNVLHKW---YFMHRDLSPANIFINSKGICKIADF 163 (335)
T ss_pred CcEEEEEeccc-cCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHeEECCCCCEEECCc
Confidence 99999999997 69998886532 378899999999999999999998 9999999999999999999999997
No 360
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.80 E-value=5.2e-20 Score=159.60 Aligned_cols=151 Identities=26% Similarity=0.362 Sum_probs=124.1
Q ss_pred HHHHhcCCCCCCccCccCCceEEEEEe-CCCCEEEEEEcccccccccHHHHHHHHHHH-hcCCCCCccceeeEEecCCee
Q 013004 294 LQVATDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKII-SMAVHRNLLRLYGFCTTVTEK 371 (451)
Q Consensus 294 ~~~~~~~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l-~~l~H~niv~l~~~~~~~~~~ 371 (451)
+.+..++......||+|++|.|-+-++ .+|+..|+|+++.....+...+.++|+.+. .....|.+|.++|........
T Consensus 41 ~eV~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdv 120 (282)
T KOG0984|consen 41 FEVPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDV 120 (282)
T ss_pred cccchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccE
Confidence 445556666678899999999877765 468999999997765555555778888765 455699999999999999999
Q ss_pred eEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 372 LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 372 ~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|+.||.|.. ||..+.++.-......++.-.-+||..|..||.|||++. .+||||+||+|||+|.+|++|++||
T Consensus 121 wIcME~M~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL--~vIHRDvKPsNiLIn~~GqVKiCDF 193 (282)
T KOG0984|consen 121 WICMELMDT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKL--SVIHRDVKPSNILINYDGQVKICDF 193 (282)
T ss_pred EEeHHHhhh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHh--hhhhccCCcceEEEccCCcEEEccc
Confidence 999999965 777766654333345788888899999999999999874 8999999999999999999999998
No 361
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.80 E-value=6.3e-19 Score=171.71 Aligned_cols=140 Identities=31% Similarity=0.460 Sum_probs=119.9
Q ss_pred CCCCCccCccCCceEEEEEeC-CCCEEEEEEccccccc--ccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEec
Q 013004 301 FSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS--GGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 377 (451)
Q Consensus 301 f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey 377 (451)
|...+.||+|+||+||+|+.. +++.||+|.+...... .....+.+|+.+++.++|||++++++++.+....++||||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 555678999999999999864 5889999998543221 2223678899999999999999999999999999999999
Q ss_pred CCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 378 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 378 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+. |++.+.+.... ..+++.++..++.|++.|+.|||+. +++||||||+||++++++.++++||
T Consensus 103 ~~-~~l~~~l~~~~---~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dl~p~nili~~~~~~kL~df 165 (313)
T cd06633 103 CL-GSASDLLEVHK---KPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADF 165 (313)
T ss_pred CC-CCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChhhEEECCCCCEEEeec
Confidence 96 57877776543 2488999999999999999999998 9999999999999999999999997
No 362
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.80 E-value=1e-19 Score=181.70 Aligned_cols=138 Identities=28% Similarity=0.415 Sum_probs=118.6
Q ss_pred CccCccCCceEEEEEeCC-CCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEecCCCCCh
Q 013004 305 NILGRGGFGKVYKGRLAD-GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSV 383 (451)
Q Consensus 305 ~~lG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~gsL 383 (451)
-++|+|.||+||.|++.+ ...+|||.+....++ ..+-+.+|+.+.+.++|.|||+++|.+.+.+..-+.||-++||+|
T Consensus 581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr-~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSL 659 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSR-EVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSL 659 (1226)
T ss_pred EEeecCceeEEEeeccccceeEEEeeecccccch-hhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcH
Confidence 369999999999999754 456899999655433 233578899999999999999999999999999999999999999
Q ss_pred hHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCC-CCCccchhh
Q 013004 384 ASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDE-DADQSSKTI 447 (451)
Q Consensus 384 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~-~~~~~i~df 447 (451)
.+.|+..-+... =.+.+.-.+..||++||.|||++ .|||||||-+|||++. .|..||+||
T Consensus 660 SsLLrskWGPlK-DNEstm~fYtkQILeGLkYLHen---~IVHRDIKGDNVLvNTySGvlKISDF 720 (1226)
T KOG4279|consen 660 SSLLRSKWGPLK-DNESTMNFYTKQILEGLKYLHEN---KIVHRDIKGDNVLVNTYSGVLKISDF 720 (1226)
T ss_pred HHHHHhccCCCc-cchhHHHHHHHHHHHHhhhhhhc---ceeeccccCCcEEEeeccceEEeccc
Confidence 999987654211 16677788999999999999999 9999999999999997 589999998
No 363
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.80 E-value=2.3e-19 Score=176.58 Aligned_cols=141 Identities=22% Similarity=0.376 Sum_probs=119.9
Q ss_pred cCCCCCCccCccCCceEEEEEe-CCCCEEEEEEcccccc-cccHHHHHHHHHHHhcCCCCCccceeeEEecC-----Cee
Q 013004 299 DGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERT-SGGELQFQTEVKIISMAVHRNLLRLYGFCTTV-----TEK 371 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-----~~~ 371 (451)
++|...+.||+|+||.||+|+. .+++.||||.++.... ......+.+|+.++..++|+||+++++++... ...
T Consensus 5 ~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~ 84 (337)
T cd07858 5 TKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDV 84 (337)
T ss_pred cceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcE
Confidence 4678889999999999999985 4689999999865322 22234677899999999999999999987643 347
Q ss_pred eEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 372 LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 372 ~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
++++||+. ++|.+++.... .+++.....++.|++.||.|||+. +++||||||+||+++.++.++++||
T Consensus 85 ~lv~e~~~-~~L~~~~~~~~----~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dlkp~Nil~~~~~~~kL~Df 152 (337)
T cd07858 85 YIVYELMD-TDLHQIIRSSQ----TLSDDHCQYFLYQLLRGLKYIHSA---NVLHRDLKPSNLLLNANCDLKICDF 152 (337)
T ss_pred EEEEeCCC-CCHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcC
Confidence 99999996 68888886542 388999999999999999999998 9999999999999999999999997
No 364
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.80 E-value=5.2e-19 Score=169.44 Aligned_cols=141 Identities=29% Similarity=0.512 Sum_probs=117.5
Q ss_pred CCCCCccCccCCceEEEEEeCC-CCEEEEEEccccccccc-HHHHHHHHHHHhcC---CCCCccceeeEEecCCe-----
Q 013004 301 FSNKNILGRGGFGKVYKGRLAD-GKLVAVKRLKEERTSGG-ELQFQTEVKIISMA---VHRNLLRLYGFCTTVTE----- 370 (451)
Q Consensus 301 f~~~~~lG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~-~~~~~~E~~~l~~l---~H~niv~l~~~~~~~~~----- 370 (451)
|+..+.||+|+||.||+|+.++ ++.||+|+++....... ...+.+|+.++..+ +|+|++++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 4567889999999999999764 89999999965433222 23466777766555 69999999999988776
Q ss_pred eeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 371 KLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 371 ~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
.+++|||+. ++|.+++..... ..+++..+..++.|++.||.|||+. +++|+||||+||++++++.++++||
T Consensus 81 ~~l~~e~~~-~~l~~~l~~~~~--~~l~~~~~~~~~~~i~~al~~LH~~---~i~h~~l~~~nili~~~~~~~l~df 151 (287)
T cd07838 81 LTLVFEHVD-QDLATYLSKCPK--PGLPPETIKDLMRQLLRGVDFLHSH---RIVHRDLKPQNILVTSDGQVKIADF 151 (287)
T ss_pred eEEEehhcc-cCHHHHHHHccC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhEEEccCCCEEEecc
Confidence 899999997 489888865432 2489999999999999999999998 9999999999999999999999997
No 365
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.80 E-value=3.2e-19 Score=176.02 Aligned_cols=140 Identities=25% Similarity=0.401 Sum_probs=117.8
Q ss_pred hcCCCCCCccCccCCceEEEEEe-CCCCEEEEEEccccccc-ccHHHHHHHHHHHhcCCCCCccceeeEEecC------C
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTS-GGELQFQTEVKIISMAVHRNLLRLYGFCTTV------T 369 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~------~ 369 (451)
.++|...+.||+|+||.||+|+. .+++.||||+++..... .....+.+|+.++..++|+||+++++++... .
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 46788889999999999999986 46899999998643222 2234678999999999999999999988654 3
Q ss_pred eeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 370 EKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 370 ~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
..++|+||+.. ++..... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++++||
T Consensus 94 ~~~lv~e~~~~-~l~~~~~------~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dlkp~NIll~~~~~~kL~df 161 (342)
T cd07879 94 DFYLVMPYMQT-DLQKIMG------HPLSEDKVQYLVYQMLCGLKYIHSA---GIIHRDLKPGNLAVNEDCELKILDF 161 (342)
T ss_pred eEEEEeccccc-CHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeC
Confidence 46899999964 6766542 1378999999999999999999998 9999999999999999999999997
No 366
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.79 E-value=2.5e-19 Score=175.68 Aligned_cols=140 Identities=24% Similarity=0.373 Sum_probs=121.5
Q ss_pred CCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccc-cccHHHHHHHHHHHhcCCCCCccceeeEEecCC-----eee
Q 013004 300 GFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT-SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVT-----EKL 372 (451)
Q Consensus 300 ~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-----~~~ 372 (451)
+|+..+.||+|+||.||+|+.. +++.||+|.+..... ......+.+|+.+++.++|+||+++++++.... ..+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 4677889999999999999975 489999999865432 223346889999999999999999999987765 789
Q ss_pred EEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 373 LVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 373 lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
++|||++ ++|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+||+++.++.++++||
T Consensus 81 lv~e~~~-~~l~~~l~~~~----~l~~~~~~~i~~~l~~~l~~LH~~---gi~H~dlkp~nili~~~~~~~L~df 147 (330)
T cd07834 81 IVTELME-TDLHKVIKSPQ----PLTDDHIQYFLYQILRGLKYLHSA---NVIHRDLKPSNILVNSNCDLKICDF 147 (330)
T ss_pred EEecchh-hhHHHHHhCCC----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEccc
Confidence 9999998 58888886543 489999999999999999999999 9999999999999999999999997
No 367
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.79 E-value=2.4e-19 Score=169.54 Aligned_cols=144 Identities=22% Similarity=0.286 Sum_probs=118.7
Q ss_pred CCCCCCccCccCCceEEEEEeCC-CCEEEEEEccccc----ccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEE
Q 013004 300 GFSNKNILGRGGFGKVYKGRLAD-GKLVAVKRLKEER----TSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLV 374 (451)
Q Consensus 300 ~f~~~~~lG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~----~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 374 (451)
+|...+.||+|+||.||+++... +..+++|.++... ......++.+|+.++..++||||+++++++.+....+++
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 36677899999999999998643 4556666654322 112233577899999999999999999999988899999
Q ss_pred EecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 375 YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 375 ~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+||+++++|.+.+.........+++.++..++.|++.|+.|||+. +++|+||||+||++++ +.++++||
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~~l~~~nili~~-~~~~l~d~ 149 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQR---RILHRDLKAKNIFLKN-NLLKIGDF 149 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHc---CccccCCChhheEeec-CCEeeccc
Confidence 999999999998876433334689999999999999999999998 9999999999999985 45888887
No 368
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.79 E-value=2.9e-19 Score=173.36 Aligned_cols=143 Identities=30% Similarity=0.459 Sum_probs=119.8
Q ss_pred hcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccc-cHHHHHHHHHHHhcCCCCCccceeeEEecCC------
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHRNLLRLYGFCTTVT------ 369 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~------ 369 (451)
.++|+..+.||+|+||.||+|+.. +++.||+|.+......+ ....+.+|++++..++|+||+++++++....
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 467888899999999999999864 58899999986443222 2235788999999999999999999875433
Q ss_pred --eeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 370 --EKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 370 --~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
..++++||+.+ ++...+.... ..+++.++..++.|+++||.|||+. +|+||||||+||++++++.++++||
T Consensus 87 ~~~~~lv~~~~~~-~l~~~~~~~~---~~~~~~~~~~i~~~l~~al~~lH~~---~i~H~dl~p~nil~~~~~~~~l~df 159 (311)
T cd07866 87 RGSVYMVTPYMDH-DLSGLLENPS---VKLTESQIKCYMLQLLEGINYLHEN---HILHRDIKAANILIDNQGILKIADF 159 (311)
T ss_pred CceEEEEEecCCc-CHHHHHhccc---cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECcC
Confidence 46999999975 6777665432 2489999999999999999999999 9999999999999999999999997
No 369
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.79 E-value=4e-19 Score=169.86 Aligned_cols=140 Identities=26% Similarity=0.449 Sum_probs=121.9
Q ss_pred CCCCCccCccCCceEEEEEeC-CCCEEEEEEccccccc-ccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEecC
Q 013004 301 FSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS-GGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYM 378 (451)
Q Consensus 301 f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~ 378 (451)
|+..+.||+|++|.||+|... +++.+|+|.++..... .....+.+|+.+++.++|+||+++++++...+..++++||+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM 80 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence 455678999999999999864 6889999998654332 22346888999999999999999999999999999999999
Q ss_pred CCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 379 TNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 379 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
++ ++.+.+.... ..+++..+..++.|++.||.|||+. +|+|+||||+||++++++.++++||
T Consensus 81 ~~-~l~~~l~~~~---~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~df 142 (283)
T cd05118 81 DT-DLYKLIKDRQ---RGLPESLIKSYLYQLLQGLAFCHSH---GILHRDLKPENLLINTEGVLKLADF 142 (283)
T ss_pred CC-CHHHHHHhhc---ccCCHHHHHHHHHHHHHHHHHHHHC---CeeecCcCHHHEEECCCCcEEEeee
Confidence 75 8888887643 2489999999999999999999998 9999999999999999999999997
No 370
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.79 E-value=5.1e-19 Score=171.91 Aligned_cols=140 Identities=31% Similarity=0.469 Sum_probs=119.7
Q ss_pred CCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccc--cccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEec
Q 013004 301 FSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 377 (451)
Q Consensus 301 f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey 377 (451)
|+..+.||+|+||.||+|+.. +++.+|+|.+..... .....++.+|+.+++.++|+|++++.+++......++|+||
T Consensus 17 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 96 (308)
T cd06634 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEY 96 (308)
T ss_pred HHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEEc
Confidence 556688999999999999864 578899998854221 22234678899999999999999999999999999999999
Q ss_pred CCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 378 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 378 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+. |++.+.+.... ..+++.++..++.|++.|+.|||+. +++||||||+||++++++.++++||
T Consensus 97 ~~-~~l~~~~~~~~---~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~kl~df 159 (308)
T cd06634 97 CL-GSASDLLEVHK---KPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDF 159 (308)
T ss_pred cC-CCHHHHHHHcC---CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHhEEECCCCcEEECCc
Confidence 96 68877775433 2478999999999999999999998 9999999999999999999999998
No 371
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.79 E-value=6e-19 Score=165.52 Aligned_cols=134 Identities=33% Similarity=0.378 Sum_probs=119.2
Q ss_pred cCccCCceEEEEEeC-CCCEEEEEEcccccccc--cHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEecCCCCCh
Q 013004 307 LGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSG--GELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSV 383 (451)
Q Consensus 307 lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~gsL 383 (451)
||+|+||.||++... +++.+|+|.++...... ....+.+|+.+++.++|+||+++++.+...+..+++|||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 699999999999875 58899999986543322 234688999999999999999999999999999999999999999
Q ss_pred hHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 384 ASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 384 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
.+++.... .+++.....++.|++.|+.|+|+. +++|+||||+||++++++.++++||
T Consensus 81 ~~~l~~~~----~l~~~~~~~~~~qi~~~l~~lh~~---~~~H~~l~p~ni~~~~~~~~~l~d~ 137 (250)
T cd05123 81 FSHLSKEG----RFSEERARFYAAEIVLALEYLHSL---GIIYRDLKPENILLDADGHIKLTDF 137 (250)
T ss_pred HHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcceEEEcCCCcEEEeec
Confidence 99997653 378999999999999999999998 9999999999999999999999987
No 372
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.79 E-value=1.5e-19 Score=177.51 Aligned_cols=142 Identities=23% Similarity=0.324 Sum_probs=121.9
Q ss_pred cCCCCCCccCccCCceEEEEEeCC-CCEEEEEEcccccc----cccH---HHHHHHHHHHhcCC---CCCccceeeEEec
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLAD-GKLVAVKRLKEERT----SGGE---LQFQTEVKIISMAV---HRNLLRLYGFCTT 367 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~----~~~~---~~~~~E~~~l~~l~---H~niv~l~~~~~~ 367 (451)
.+|+....+|+|+||+|+.|.++. ...|.||.+.+++- +... -..-.|+.+|..++ |+||++++++|++
T Consensus 561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd 640 (772)
T KOG1152|consen 561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED 640 (772)
T ss_pred ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec
Confidence 457888999999999999998754 67899999866542 1111 13456999999998 9999999999999
Q ss_pred CCeeeEEEec-CCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchh
Q 013004 368 VTEKLLVYPY-MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKT 446 (451)
Q Consensus 368 ~~~~~lv~ey-~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~d 446 (451)
.+..|++||- -++-||++++..+ +.+++.++..|..||+.|+++||++ +|||||||-+||.+|.+|-+|+.|
T Consensus 641 dd~yyl~te~hg~gIDLFd~IE~k----p~m~E~eAk~IFkQV~agi~hlh~~---~ivhrdikdenvivd~~g~~klid 713 (772)
T KOG1152|consen 641 DDYYYLETEVHGEGIDLFDFIEFK----PRMDEPEAKLIFKQVVAGIKHLHDQ---GIVHRDIKDENVIVDSNGFVKLID 713 (772)
T ss_pred CCeeEEEecCCCCCcchhhhhhcc----CccchHHHHHHHHHHHhcccccccc---CceecccccccEEEecCCeEEEee
Confidence 9999999995 4567999999654 3489999999999999999999999 999999999999999999999999
Q ss_pred h
Q 013004 447 I 447 (451)
Q Consensus 447 f 447 (451)
|
T Consensus 714 f 714 (772)
T KOG1152|consen 714 F 714 (772)
T ss_pred c
Confidence 8
No 373
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.79 E-value=5.3e-20 Score=175.45 Aligned_cols=143 Identities=25% Similarity=0.375 Sum_probs=119.8
Q ss_pred CCCCCCccCccCCceEEEEEe-CCCCEEEEEEccccccccc------HHHHHHHHHHHhcCCCCCccceeeEEec-CCee
Q 013004 300 GFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGG------ELQFQTEVKIISMAVHRNLLRLYGFCTT-VTEK 371 (451)
Q Consensus 300 ~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~~~------~~~~~~E~~~l~~l~H~niv~l~~~~~~-~~~~ 371 (451)
+|-...+||+|+|++||+|.+ ...+.||||+-.....+.+ .....+|.++.+.+.||.||++|+++.- .+..
T Consensus 464 RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtdsF 543 (775)
T KOG1151|consen 464 RYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDSF 543 (775)
T ss_pred HHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccccc
Confidence 345567899999999999974 4578899998543332222 2246889999999999999999999864 5567
Q ss_pred eEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCC---CCccchhh
Q 013004 372 LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDED---ADQSSKTI 447 (451)
Q Consensus 372 ~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~---~~~~i~df 447 (451)
+-|+|||+|.||..+|+.... +++.++..|+.||+.||.||.+. +|+|||-||||.|||+-+. |++||.||
T Consensus 544 CTVLEYceGNDLDFYLKQhkl----mSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacGeIKITDF 617 (775)
T KOG1151|consen 544 CTVLEYCEGNDLDFYLKQHKL----MSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACGEIKITDF 617 (775)
T ss_pred eeeeeecCCCchhHHHHhhhh----hhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccceeEeeec
Confidence 899999999999999987643 78999999999999999999997 8899999999999999764 78899998
No 374
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.79 E-value=4.9e-19 Score=169.18 Aligned_cols=140 Identities=30% Similarity=0.490 Sum_probs=122.2
Q ss_pred CCCCCccCccCCceEEEEEeC-CCCEEEEEEccccccc-ccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEecC
Q 013004 301 FSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS-GGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYM 378 (451)
Q Consensus 301 f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~ 378 (451)
|+..+.||+|+||.||+|+.. +++.||+|.++..... .....+..|+.+++.++|+|++++++++...+..++|+||+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC 80 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence 455678999999999999865 5899999998754322 22346788999999999999999999999999999999999
Q ss_pred CCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 379 TNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 379 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+ ++|.+++.... ..+++..+..++.|++.||.|||+. +|+||||+|+||++++++.++++||
T Consensus 81 ~-~~l~~~i~~~~---~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~~l~~~ni~~~~~~~~~l~d~ 142 (282)
T cd07829 81 D-MDLKKYLDKRP---GPLSPNLIKSIMYQLLRGLAYCHSH---RILHRDLKPQNILINRDGVLKLADF 142 (282)
T ss_pred C-cCHHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChheEEEcCCCCEEEecC
Confidence 8 59999997653 2489999999999999999999999 9999999999999999999999997
No 375
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.79 E-value=6.5e-19 Score=173.06 Aligned_cols=140 Identities=24% Similarity=0.364 Sum_probs=116.0
Q ss_pred CCCCCCccCccCCceEEEEEeC-C--CCEEEEEEcccccccc-cHHHHHHHHHHHhcC-CCCCccceeeEEecC----Ce
Q 013004 300 GFSNKNILGRGGFGKVYKGRLA-D--GKLVAVKRLKEERTSG-GELQFQTEVKIISMA-VHRNLLRLYGFCTTV----TE 370 (451)
Q Consensus 300 ~f~~~~~lG~G~fg~Vy~~~~~-~--~~~vAvK~~~~~~~~~-~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~----~~ 370 (451)
+|+..+.||+|+||.||+++.. + ++.||+|++....... ....+.+|+.++..+ +||||+++++++... ..
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 3666788999999999999864 3 6789999986432222 234678899999988 599999999875432 45
Q ss_pred eeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 371 KLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 371 ~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
.++++||+. ++|.+.+.... .+++..+..++.|++.||.|||+. +|+||||||+||++++++.++|+||
T Consensus 81 ~~~~~e~~~-~~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---givH~dlkp~Nili~~~~~~kl~Df 149 (332)
T cd07857 81 LYLYEELME-ADLHQIIRSGQ----PLTDAHFQSFIYQILCGLKYIHSA---NVLHRDLKPGNLLVNADCELKICDF 149 (332)
T ss_pred EEEEEeccc-CCHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHeEEcCCCCEEeCcC
Confidence 788889886 68988886542 388999999999999999999998 9999999999999999999999997
No 376
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.78 E-value=6.8e-20 Score=194.38 Aligned_cols=142 Identities=34% Similarity=0.469 Sum_probs=122.8
Q ss_pred cCCCCCCccCccCCceEEEEE-eCCCCEEEEEEccccccc-ccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEe
Q 013004 299 DGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLKEERTS-GGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 376 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~-~~~~~~vAvK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 376 (451)
-+++....||.|.||+||-|. ..+|+..|||-++..... .......+|..++..++|||+|+++|+-.+.+..++.||
T Consensus 1235 ~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFME 1314 (1509)
T KOG4645|consen 1235 FRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFME 1314 (1509)
T ss_pred eeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHH
Confidence 345667889999999999998 567999999988644332 223357889999999999999999999999999999999
Q ss_pred cCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 377 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 377 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
||++|+|.+.+...+. .++.....+..|++.|+.|||++ +|||||+||.||++|.+|.+|.+||
T Consensus 1315 yC~~GsLa~ll~~gri----~dE~vt~vyt~qll~gla~LH~~---gIVHRDIK~aNI~Ld~~g~iK~~DF 1378 (1509)
T KOG4645|consen 1315 YCEGGSLASLLEHGRI----EDEMVTRVYTKQLLEGLAYLHEH---GIVHRDIKPANILLDFNGLIKYGDF 1378 (1509)
T ss_pred HhccCcHHHHHHhcch----hhhhHHHHHHHHHHHHHHHHHhc---CceecCCCccceeeecCCcEEeecc
Confidence 9999999999976532 56666677889999999999999 9999999999999999999999998
No 377
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.78 E-value=4.6e-21 Score=170.75 Aligned_cols=140 Identities=32% Similarity=0.554 Sum_probs=117.4
Q ss_pred CCCCCccCccCCceEEEEEeC-CCCEEEEEEccccccccc-HHHHHHHHHHHhcCCCCCccceeeEEecC--------Ce
Q 013004 301 FSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGG-ELQFQTEVKIISMAVHRNLLRLYGFCTTV--------TE 370 (451)
Q Consensus 301 f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~-~~~~~~E~~~l~~l~H~niv~l~~~~~~~--------~~ 370 (451)
|.....||+|.||+||+|+.+ +|+.||+|++-.+....+ .....+|+.++..++|+|++.+++.|.+. ..
T Consensus 19 yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t 98 (376)
T KOG0669|consen 19 YEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRAT 98 (376)
T ss_pred HHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccce
Confidence 444577999999999999864 578899987643332222 33578999999999999999999988642 34
Q ss_pred eeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 371 KLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 371 ~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
.|+|+++|+. ||...|..... +++..+..+++.++..||.|+|+. .|+|||+||+|+|++.++..|++||
T Consensus 99 ~ylVf~~ceh-DLaGlLsn~~v---r~sls~Ikk~Mk~Lm~GL~~iHr~---kilHRDmKaaNvLIt~dgilklADF 168 (376)
T KOG0669|consen 99 FYLVFDFCEH-DLAGLLSNRKV---RFSLSEIKKVMKGLMNGLYYIHRN---KILHRDMKAANVLITKDGILKLADF 168 (376)
T ss_pred eeeeHHHhhh-hHHHHhcCccc---cccHHHHHHHHHHHHHHHHHHHHh---hHHhhcccHhhEEEcCCceEEeecc
Confidence 7999999986 89988876533 488899999999999999999999 9999999999999999999999998
No 378
>PRK10345 hypothetical protein; Provisional
Probab=99.78 E-value=1.4e-18 Score=158.01 Aligned_cols=135 Identities=18% Similarity=0.230 Sum_probs=102.8
Q ss_pred CCCCCccCccCCceEEEEEeCCCCEEEEEEcccccccccHHHHHHHHHHHhcC-----CCCCccceeeEEecCC---eee
Q 013004 301 FSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMA-----VHRNLLRLYGFCTTVT---EKL 372 (451)
Q Consensus 301 f~~~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-----~H~niv~l~~~~~~~~---~~~ 372 (451)
.+..+.||+|+||.||. .-.++.. +||++..... .....+.+|+..+..+ .||||++++|++.+.. ..+
T Consensus 4 L~~~~~LG~G~~~~Vy~-hp~~~~k-~IKv~~~~~~-~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~ 80 (210)
T PRK10345 4 LSEQSPLGTGRHRKCYA-HPEDAQR-CIKIVYHRGD-GGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVY 80 (210)
T ss_pred cCCcceecCCCceEEEE-CCCCcCe-EEEEEecccc-chHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEE
Confidence 34567899999999996 2223444 6888755322 2345789999999998 5799999999998864 333
Q ss_pred -EEEec--CCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHH-HhHhcCCCCCeeecCCCCCceeeCCC----CCccc
Q 013004 373 -LVYPY--MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGL-SYLHEHCDPKIIHRDVKAANILLDED----ADQSS 444 (451)
Q Consensus 373 -lv~ey--~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L-~yLH~~~~~~iiHrDlK~~NILld~~----~~~~i 444 (451)
+|+|| +.+|+|.+++.+.. +++. ..++.+++.++ +|||++ +|+||||||+|||++.+ ..++|
T Consensus 81 ~~I~e~~G~~~~tL~~~l~~~~-----~~e~--~~~~~~~L~~l~~yLh~~---~IvhrDlKp~NILl~~~~~~~~~~~L 150 (210)
T PRK10345 81 DVIADFDGKPSITLTEFAEQCR-----YEED--VAQLRQLLKKLKRYLLDN---RIVTMELKPQNILCQRISESEVIPVV 150 (210)
T ss_pred EEEecCCCCcchhHHHHHHccc-----ccHh--HHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEeccCCCCCcEEE
Confidence 78999 66899999996531 4444 35577778777 999999 99999999999999843 37899
Q ss_pred hhhh
Q 013004 445 KTIL 448 (451)
Q Consensus 445 ~df~ 448 (451)
+|++
T Consensus 151 iDg~ 154 (210)
T PRK10345 151 CDNI 154 (210)
T ss_pred EECC
Confidence 9953
No 379
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.78 E-value=9.2e-19 Score=163.50 Aligned_cols=126 Identities=21% Similarity=0.204 Sum_probs=109.3
Q ss_pred cCCceEEEEEe-CCCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEecCCCCChhHHhh
Q 013004 310 GGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLR 388 (451)
Q Consensus 310 G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~ 388 (451)
|.||+||+++. .+++.||+|.++... .+.+|...+....||||+++++++.+.+..+++|||+++|+|.+++.
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~ 77 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS------EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHIS 77 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh------hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHH
Confidence 88999999986 468899999986532 23345555556679999999999999999999999999999999987
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhhh
Q 013004 389 ERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 448 (451)
Q Consensus 389 ~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df~ 448 (451)
... .+++.....++.|+++||+|||+. +|+||||||+||++++++.++++||-
T Consensus 78 ~~~----~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~df~ 130 (237)
T cd05576 78 KFL----NIPEECVKRWAAEMVVALDALHRE---GIVCRDLNPNNILLDDRGHIQLTYFS 130 (237)
T ss_pred Hhc----CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEEEeccc
Confidence 643 388999999999999999999998 99999999999999999999999973
No 380
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=99.78 E-value=1.3e-19 Score=165.19 Aligned_cols=139 Identities=25% Similarity=0.321 Sum_probs=116.1
Q ss_pred hcCCCC-CCccCccCCceEEEEEe-CCCCEEEEEEcccccccccHHHHHHHHHHHhcC-CCCCccceeeEEec----CCe
Q 013004 298 TDGFSN-KNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMA-VHRNLLRLYGFCTT----VTE 370 (451)
Q Consensus 298 ~~~f~~-~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~----~~~ 370 (451)
+++|+. ..+||-|-.|+|-.+.. ++++.+|+|++.. ....++|+++.-+. .|||||+++++|.. ...
T Consensus 60 tedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~D------s~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkc 133 (400)
T KOG0604|consen 60 TEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLD------SPKARREVELHWMASGHPHIVSIIDVYENSYQGRKC 133 (400)
T ss_pred hhhheehhhhhccccCCceEEEEeccchhhhHHHHHhc------CHHHHhHhhhhhhhcCCCceEEeehhhhhhccCcee
Confidence 455543 36799999999999975 5688999998843 22467888877666 49999999998864 456
Q ss_pred eeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCC---CCccchhh
Q 013004 371 KLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDED---ADQSSKTI 447 (451)
Q Consensus 371 ~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~---~~~~i~df 447 (451)
+.+|||+|+||.|+..+++++.. .+++.++-.|+.||+.|+.|||+. +|.||||||+|+|..+. ...|+.||
T Consensus 134 LLiVmE~meGGeLfsriq~~g~~--afTErea~eI~~qI~~Av~~lH~~---nIAHRDlKpENLLyt~t~~na~lKLtDf 208 (400)
T KOG0604|consen 134 LLIVMECMEGGELFSRIQDRGDQ--AFTEREASEIMKQIGLAVRYLHSM---NIAHRDLKPENLLYTTTSPNAPLKLTDF 208 (400)
T ss_pred eEeeeecccchHHHHHHHHcccc--cchHHHHHHHHHHHHHHHHHHHhc---chhhccCChhheeeecCCCCcceEeccc
Confidence 78999999999999999987653 589999999999999999999999 99999999999999864 45688887
No 381
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.77 E-value=9.2e-19 Score=179.60 Aligned_cols=146 Identities=30% Similarity=0.453 Sum_probs=125.8
Q ss_pred HHHhcCCCCCCccCccCCceEEEEE-eCCCCEEEEEEcccccccccHHHHHHHHHHHhcC-CCCCccceeeEEec-----
Q 013004 295 QVATDGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLKEERTSGGELQFQTEVKIISMA-VHRNLLRLYGFCTT----- 367 (451)
Q Consensus 295 ~~~~~~f~~~~~lG~G~fg~Vy~~~-~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~----- 367 (451)
...++-|...++||.|.+|+||+++ .++++.+|+|++...... ..+...|.++++.. .|||++.++|++.-
T Consensus 15 pdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~--deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~ 92 (953)
T KOG0587|consen 15 PDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDE--EEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGN 92 (953)
T ss_pred CCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccc--cHHHHHHHHHHHhccCCCCcceEEEEEEEecCCC
Confidence 3456678888999999999999998 457899999998665433 34567777777766 59999999998863
Q ss_pred CCeeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 368 VTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 368 ~~~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
++++|+|||||.+||..+.+.... ..++.|.....|++.++.|+.+||.. .++|||+|-.|||+++++.+|+.||
T Consensus 93 ~DqLWLVMEfC~gGSVTDLVKn~~--g~rl~E~~IaYI~re~lrgl~HLH~n---kviHRDikG~NiLLT~e~~VKLvDF 167 (953)
T KOG0587|consen 93 GDQLWLVMEFCGGGSVTDLVKNTK--GNRLKEEWIAYILREILRGLAHLHNN---KVIHRDIKGQNVLLTENAEVKLVDF 167 (953)
T ss_pred CCeEEEEeeccCCccHHHHHhhhc--ccchhhHHHHHHHHHHHHHHHHHhhc---ceeeecccCceEEEeccCcEEEeee
Confidence 578999999999999999998765 34589999999999999999999999 8999999999999999999999998
No 382
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.77 E-value=7.2e-19 Score=173.55 Aligned_cols=142 Identities=25% Similarity=0.377 Sum_probs=121.2
Q ss_pred HhcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccc-cccHHHHHHHHHHHhcCCCCCccceeeEEecCCe----
Q 013004 297 ATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT-SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTE---- 370 (451)
Q Consensus 297 ~~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~---- 370 (451)
..++|+..+.||+|+||.||+|+.. +++.||||++..... ......+.+|+.+++.++|+|++++.+++...+.
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF 92 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence 3567888899999999999999875 578999999864322 2223457789999999999999999988766554
Q ss_pred --eeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 371 --KLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 371 --~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
.++|+||+ +++|.+++... .+++..+..++.|+++||+|||+. +|+||||||+||++++++.++++||
T Consensus 93 ~~~~lv~e~~-~~~L~~~~~~~-----~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nill~~~~~~kL~df 162 (343)
T cd07851 93 QDVYLVTHLM-GADLNNIVKCQ-----KLSDDHIQFLVYQILRGLKYIHSA---GIIHRDLKPSNIAVNEDCELKILDF 162 (343)
T ss_pred ccEEEEEecC-CCCHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEccc
Confidence 89999998 67998888652 389999999999999999999998 9999999999999999999999997
No 383
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.77 E-value=1.1e-18 Score=172.21 Aligned_cols=139 Identities=25% Similarity=0.371 Sum_probs=116.4
Q ss_pred cCCCCCCccCccCCceEEEEEe-CCCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecC---------
Q 013004 299 DGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTV--------- 368 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--------- 368 (451)
.+|...+.||+|+||.||+|.. .+++.||+|.+..... .....+.+|+.+++.++||||+++++++...
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~-~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDP-QSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVG 83 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCC-chHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccc
Confidence 5678889999999999999986 4688999998855432 2334688999999999999999999776543
Q ss_pred -----CeeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCC-CCc
Q 013004 369 -----TEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDED-ADQ 442 (451)
Q Consensus 369 -----~~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~-~~~ 442 (451)
...++++||++ ++|.+++... .+++.....++.|+++||.|||+. +|+||||||+||+++.+ +.+
T Consensus 84 ~~~~~~~~~lv~e~~~-~~L~~~~~~~-----~l~~~~~~~~~~qi~~aL~~LH~~---givH~dikp~Nili~~~~~~~ 154 (342)
T cd07854 84 SLTELNSVYIVQEYME-TDLANVLEQG-----PLSEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANVFINTEDLVL 154 (342)
T ss_pred cccccceEEEEeeccc-ccHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCceE
Confidence 35789999997 5888887542 378999999999999999999998 99999999999999854 567
Q ss_pred cchhh
Q 013004 443 SSKTI 447 (451)
Q Consensus 443 ~i~df 447 (451)
+++||
T Consensus 155 kl~df 159 (342)
T cd07854 155 KIGDF 159 (342)
T ss_pred EECCc
Confidence 88887
No 384
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.76 E-value=1.8e-19 Score=170.47 Aligned_cols=144 Identities=24% Similarity=0.341 Sum_probs=123.5
Q ss_pred HhcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccc--cHHHHHHHHHHHhcCC-CCCccceeeEEecCCeee
Q 013004 297 ATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSG--GELQFQTEVKIISMAV-HRNLLRLYGFCTTVTEKL 372 (451)
Q Consensus 297 ~~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~--~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~ 372 (451)
-..+|....+||+|+||+|.+|+.+ +.+.+|||+++++..-+ +..--+.|-++++... -|.+++++.++++-+.+|
T Consensus 347 ~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLy 426 (683)
T KOG0696|consen 347 KATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLY 426 (683)
T ss_pred eecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhhee
Confidence 3456888899999999999999865 46789999998765322 2223456777777664 788999999999999999
Q ss_pred EEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 373 LVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 373 lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
.||||+.||+|...+++-+. +.++.+..+|..||-||-|||++ +||+||||.+|||+|.+|.+||+||
T Consensus 427 FVMEyvnGGDLMyhiQQ~Gk----FKEp~AvFYAaEiaigLFFLh~k---gIiYRDLKLDNvmLd~eGHiKi~DF 494 (683)
T KOG0696|consen 427 FVMEYVNGGDLMYHIQQVGK----FKEPVAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADF 494 (683)
T ss_pred eEEEEecCchhhhHHHHhcc----cCCchhhhhhHHHHHHhhhhhcC---CeeeeeccccceEeccCCceEeeec
Confidence 99999999999999987643 78889999999999999999999 9999999999999999999999998
No 385
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.76 E-value=1.8e-18 Score=182.07 Aligned_cols=150 Identities=27% Similarity=0.393 Sum_probs=128.7
Q ss_pred HHHhcCCCCCCccCccCCceEEEEEeC----C----CCEEEEEEcccccccccHHHHHHHHHHHhcCC-CCCccceeeEE
Q 013004 295 QVATDGFSNKNILGRGGFGKVYKGRLA----D----GKLVAVKRLKEERTSGGELQFQTEVKIISMAV-HRNLLRLYGFC 365 (451)
Q Consensus 295 ~~~~~~f~~~~~lG~G~fg~Vy~~~~~----~----~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~ 365 (451)
+...++.+..+.+|+|+||+|++|... . ...||||.++......+...+..|+.+|..+. |+||+.++|+|
T Consensus 292 e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~ 371 (609)
T KOG0200|consen 292 EIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGAC 371 (609)
T ss_pred eechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeee
Confidence 344455555669999999999999742 1 35799999987766655668999999998885 99999999999
Q ss_pred ecCCeeeEEEecCCCCChhHHhhccC---CC-------C--CCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCc
Q 013004 366 TTVTEKLLVYPYMTNGSVASRLRERQ---SS-------L--PPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAAN 433 (451)
Q Consensus 366 ~~~~~~~lv~ey~~~gsL~~~l~~~~---~~-------~--~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~N 433 (451)
......++|+||++.|+|..+++..+ .. . ..++..+.+.++.|||.|++||++. ++|||||.++|
T Consensus 372 t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~---~~vHRDLAaRN 448 (609)
T KOG0200|consen 372 TQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV---PCVHRDLAARN 448 (609)
T ss_pred ccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC---Cccchhhhhhh
Confidence 99999999999999999999999876 00 0 1378889999999999999999999 99999999999
Q ss_pred eeeCCCCCccchhh
Q 013004 434 ILLDEDADQSSKTI 447 (451)
Q Consensus 434 ILld~~~~~~i~df 447 (451)
||+..+..+||+||
T Consensus 449 VLi~~~~~~kIaDF 462 (609)
T KOG0200|consen 449 VLITKNKVIKIADF 462 (609)
T ss_pred EEecCCCEEEEccc
Confidence 99999999999998
No 386
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.75 E-value=8.4e-20 Score=163.94 Aligned_cols=144 Identities=26% Similarity=0.376 Sum_probs=114.6
Q ss_pred CCCCCccCccCCceEEEEEe-CCCCEEEEEEcccccccccHHHHHHHHHHHh-cCCCCCccceeeEEecCCeeeEEEecC
Q 013004 301 FSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIIS-MAVHRNLLRLYGFCTTVTEKLLVYPYM 378 (451)
Q Consensus 301 f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~-~l~H~niv~l~~~~~~~~~~~lv~ey~ 378 (451)
.+....||.|+||+|++-.+ +.|+..|||+++......+..+++.|.++.. .-+.||||+++|.+...+..|+-||.|
T Consensus 66 Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELM 145 (361)
T KOG1006|consen 66 LQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELM 145 (361)
T ss_pred HHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHH
Confidence 34456799999999999875 4699999999987665555667888887654 446899999999999999999999999
Q ss_pred CCCChhHHhhcc-CCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 379 TNGSVASRLRER-QSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 379 ~~gsL~~~l~~~-~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
.- |+..+...- ......+++.-.-.|+.....||.||-+.. .|||||+||+|||+|..|.+|++||
T Consensus 146 d~-SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~l--kiIHRDvKPSNILldr~G~vKLCDF 212 (361)
T KOG1006|consen 146 DI-SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEEL--KIIHRDVKPSNILLDRHGDVKLCDF 212 (361)
T ss_pred hh-hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHh--hhhhccCChhheEEecCCCEeeecc
Confidence 64 654443211 011124777777788888899999999764 8999999999999999999999998
No 387
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.75 E-value=9.4e-19 Score=161.72 Aligned_cols=145 Identities=25% Similarity=0.345 Sum_probs=126.0
Q ss_pred HHhcCCCCCCccCccCCceEEEEEe-CCCCEEEEEEccccccccc--HHHHHHHHHHHhcC-CCCCccceeeEEecCCee
Q 013004 296 VATDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGG--ELQFQTEVKIISMA-VHRNLLRLYGFCTTVTEK 371 (451)
Q Consensus 296 ~~~~~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~~~--~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~ 371 (451)
...++|...++||+|+|++|..+++ ++.+.+|+|+++++...++ ....+.|-.+.... +||.+|.+..++++...+
T Consensus 247 l~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrl 326 (593)
T KOG0695|consen 247 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRL 326 (593)
T ss_pred cccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceE
Confidence 3457899999999999999999986 5688999999987654433 22456677777655 599999999999999999
Q ss_pred eEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 372 LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 372 ~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+.|.||++||+|.-+++.++. +++..+..+...|..||.|||+. +||+||||.+|||+|.+|.+|+.|+
T Consensus 327 ffvieyv~ggdlmfhmqrqrk----lpeeharfys~ei~lal~flh~r---giiyrdlkldnvlldaeghikltdy 395 (593)
T KOG0695|consen 327 FFVIEYVNGGDLMFHMQRQRK----LPEEHARFYSAEICLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDY 395 (593)
T ss_pred EEEEEEecCcceeeehhhhhc----CcHHHhhhhhHHHHHHHHHHhhc---CeeeeeccccceEEccCCceeeccc
Confidence 999999999999988876643 88999999999999999999999 9999999999999999999999886
No 388
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.74 E-value=1.3e-17 Score=161.08 Aligned_cols=142 Identities=21% Similarity=0.268 Sum_probs=104.0
Q ss_pred hcCCCCCCccCccCCceEEEEEeCC----CCEEEEEEccccccccc-H---------HHHHHHHHHHhcCCCCCccceee
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLAD----GKLVAVKRLKEERTSGG-E---------LQFQTEVKIISMAVHRNLLRLYG 363 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~~----~~~vAvK~~~~~~~~~~-~---------~~~~~E~~~l~~l~H~niv~l~~ 363 (451)
..+|+..+.||+|+||+||+|+..+ +..+|+|.......... . .....+...+..+.|+|++++++
T Consensus 11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~ 90 (294)
T PHA02882 11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYG 90 (294)
T ss_pred CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEE
Confidence 3568888999999999999998754 34566665432211100 0 01223334556778999999999
Q ss_pred EEecCC----eeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCC
Q 013004 364 FCTTVT----EKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDED 439 (451)
Q Consensus 364 ~~~~~~----~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~ 439 (451)
++.... ..++++|++.. ++.+.+.... ..++.....++.|++.||+|||+. +|+||||||+|||++.+
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~----~~~~~~~~~i~~qi~~~l~~lH~~---~iiHrDiKp~Nill~~~ 162 (294)
T PHA02882 91 CGSFKRCRMYYRFILLEKLVE-NTKEIFKRIK----CKNKKLIKNIMKDMLTTLEYIHEH---GISHGDIKPENIMVDGN 162 (294)
T ss_pred eeeEecCCceEEEEEEehhcc-CHHHHHHhhc----cCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCC
Confidence 766543 34677887643 5655554321 256788889999999999999998 99999999999999999
Q ss_pred CCccchhh
Q 013004 440 ADQSSKTI 447 (451)
Q Consensus 440 ~~~~i~df 447 (451)
+.++++||
T Consensus 163 ~~~~l~DF 170 (294)
T PHA02882 163 NRGYIIDY 170 (294)
T ss_pred CcEEEEEc
Confidence 99999998
No 389
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.74 E-value=2.5e-17 Score=151.50 Aligned_cols=141 Identities=34% Similarity=0.497 Sum_probs=123.3
Q ss_pred CCCCCccCccCCceEEEEEeCC-CCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEecCC
Q 013004 301 FSNKNILGRGGFGKVYKGRLAD-GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMT 379 (451)
Q Consensus 301 f~~~~~lG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~ 379 (451)
|...+.||+|++|.||++...+ ++.+|+|.+...........+.+|+..+..++|+|++++++++......++++||++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE 80 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence 4456789999999999999764 889999998654332134578899999999999999999999999899999999999
Q ss_pred CCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 380 NGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 380 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+++|.+++...... +++.....++.+++.++.|||.. +++|+|++|+||+++.++.++++||
T Consensus 81 ~~~L~~~~~~~~~~---~~~~~~~~~~~~l~~~l~~lh~~---~i~h~di~~~ni~v~~~~~~~l~d~ 142 (225)
T smart00221 81 GGDLFDYLRKKGGK---LSEEEARFYLRQILEALEYLHSL---GIVHRDLKPENILLGMDGLVKLADF 142 (225)
T ss_pred CCCHHHHHHhcccC---CCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeC
Confidence 99999998765321 78899999999999999999998 9999999999999999999999987
No 390
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.73 E-value=5.3e-17 Score=146.87 Aligned_cols=135 Identities=37% Similarity=0.556 Sum_probs=119.2
Q ss_pred cCccCCceEEEEEeCC-CCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEecCCCCChhH
Q 013004 307 LGRGGFGKVYKGRLAD-GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVAS 385 (451)
Q Consensus 307 lG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~gsL~~ 385 (451)
||+|.+|.||++...+ ++.+++|.+...........+.+|+..+..++|++++++++++......++++||+.+++|.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 6899999999999754 889999998654332123578999999999999999999999999899999999999999999
Q ss_pred HhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCC-CCCccchhh
Q 013004 386 RLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDE-DADQSSKTI 447 (451)
Q Consensus 386 ~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~-~~~~~i~df 447 (451)
++.... ..+++..+..++.++++++.|||+. +++|+||+|.||+++. ++.++++||
T Consensus 81 ~~~~~~---~~~~~~~~~~~~~~l~~~l~~lh~~---~~~H~dl~~~ni~~~~~~~~~~l~d~ 137 (215)
T cd00180 81 LLKENE---GKLSEDEILRILLQILEGLEYLHSN---GIIHRDLKPENILLDSDNGKVKLADF 137 (215)
T ss_pred HHHhcc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHhhEEEeCCCCcEEEecC
Confidence 987652 2378999999999999999999999 9999999999999999 889999987
No 391
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.73 E-value=8.1e-19 Score=175.00 Aligned_cols=143 Identities=29% Similarity=0.429 Sum_probs=126.9
Q ss_pred HhcCCCCCCccCccCCceEEEEEe-CCCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEE
Q 013004 297 ATDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 375 (451)
Q Consensus 297 ~~~~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (451)
..++|.....+|.|.||.||+++. ++++..|||.++.+... ...-...|+.++...+|||||.++|.+...+..|+.|
T Consensus 13 P~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~d-d~~~iqqei~~~~dc~h~nivay~gsylr~dklwicM 91 (829)
T KOG0576|consen 13 PQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGD-DFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICM 91 (829)
T ss_pred CccchhheeeecCCcccchhhhcccccCchhhheeeeccCCc-cccccccceeeeecCCCcChHHHHhhhhhhcCcEEEE
Confidence 356788889999999999999996 46899999999765433 2334678999999999999999999999999999999
Q ss_pred ecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 376 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 376 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|||-+|+|.+..+-.. ++++.+...+++...+|+.|||+. +-+|||+|-.|||+++.+++|++||
T Consensus 92 EycgggslQdiy~~Tg----plselqiayvcRetl~gl~ylhs~---gk~hRdiKGanilltd~gDvklaDf 156 (829)
T KOG0576|consen 92 EYCGGGSLQDIYHVTG----PLSELQIAYVCRETLQGLKYLHSQ---GKIHRDIKGANILLTDEGDVKLADF 156 (829)
T ss_pred EecCCCcccceeeecc----cchhHHHHHHHhhhhccchhhhcC---CcccccccccceeecccCceeeccc
Confidence 9999999998887653 488889999999999999999999 8899999999999999999999998
No 392
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=99.72 E-value=9.2e-18 Score=151.45 Aligned_cols=139 Identities=25% Similarity=0.432 Sum_probs=112.5
Q ss_pred CCCccCccCCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHHHhcCC-CCCccceeeEEecCCeeeEEEecCCC
Q 013004 303 NKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAV-HRNLLRLYGFCTTVTEKLLVYPYMTN 380 (451)
Q Consensus 303 ~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lv~ey~~~ 380 (451)
....||.|+.|.|++++++ +|...|||.+..........+.+..+.++.+.+ .|.||+.+|||......++-||.|..
T Consensus 96 ~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelMs~ 175 (391)
T KOG0983|consen 96 NLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELMST 175 (391)
T ss_pred hHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHHHH
Confidence 3455999999999999875 589999999966544444456777787776665 89999999999999999999998853
Q ss_pred CChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 381 GSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 381 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
-+...++.-. .++++.-.-++...+.+||.||.+++ +|||||+||+|||+|+.|++|++||
T Consensus 176 -C~ekLlkrik---~piPE~ilGk~tva~v~AL~YLKeKH--~viHRDvKPSNILlDe~GniKlCDF 236 (391)
T KOG0983|consen 176 -CAEKLLKRIK---GPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGNIKLCDF 236 (391)
T ss_pred -HHHHHHHHhc---CCchHHhhhhhHHHHHHHHHHHHHhc--ceeecccCccceEEccCCCEEeecc
Confidence 3333343322 24677777789999999999999876 8999999999999999999999998
No 393
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.72 E-value=2.4e-18 Score=151.53 Aligned_cols=136 Identities=21% Similarity=0.373 Sum_probs=113.6
Q ss_pred hcCCCCCCccCccCCceEEEEE-eCCCCEEEEEEcccccccccHHHHHHHHHHHhcCC-CCCccceeeEEecCC--eeeE
Q 013004 298 TDGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLKEERTSGGELQFQTEVKIISMAV-HRNLLRLYGFCTTVT--EKLL 373 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~-~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~--~~~l 373 (451)
.++|+..+.+|+|.|++||.|. ..+++.+.||++++.. .....+|+.++..+. ||||+++++...++. ...+
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk----kkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaL 112 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK----KKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSL 112 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH----HHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchh
Confidence 4667788999999999999997 4567889999997643 236789999999998 999999999887654 4679
Q ss_pred EEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCC-Cccchhh
Q 013004 374 VYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDA-DQSSKTI 447 (451)
Q Consensus 374 v~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~-~~~i~df 447 (451)
++||+.+-+....... ++..+...+..+++.||.|+|+. ||+|||+||.|+++|... ..++.|.
T Consensus 113 iFE~v~n~Dfk~ly~t-------l~d~dIryY~~elLkALdyCHS~---GImHRDVKPhNvmIdh~~rkLrlIDW 177 (338)
T KOG0668|consen 113 IFEYVNNTDFKQLYPT-------LTDYDIRYYIYELLKALDYCHSM---GIMHRDVKPHNVMIDHELRKLRLIDW 177 (338)
T ss_pred HhhhhccccHHHHhhh-------hchhhHHHHHHHHHHHHhHHHhc---CcccccCCcceeeechhhceeeeeec
Confidence 9999999887655532 66677888999999999999999 999999999999999763 5666653
No 394
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.71 E-value=1e-18 Score=157.39 Aligned_cols=138 Identities=25% Similarity=0.343 Sum_probs=113.7
Q ss_pred CCCCccCccCCceEEEEEe-CCCCEEEEEEcccccc-cccHHHHHHHHHHHhcCCCCCccceeeEEecC-----CeeeEE
Q 013004 302 SNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERT-SGGELQFQTEVKIISMAVHRNLLRLYGFCTTV-----TEKLLV 374 (451)
Q Consensus 302 ~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-----~~~~lv 374 (451)
+.-+.||-|+||.||...+ ++|+.||.|++..... -.....+.+|..++...+|.|+...++...-. .++|.+
T Consensus 56 ~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~ 135 (449)
T KOG0664|consen 56 QPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVL 135 (449)
T ss_pred CCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHH
Confidence 3447899999999999986 5799999998854321 11234688999999999999999998876543 357888
Q ss_pred EecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 375 YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 375 ~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+|.|. .||...+.... .++-...+.+.+||++||.|||+. +|.||||||.|.|+++|...||+||
T Consensus 136 TELmQ-SDLHKIIVSPQ----~Ls~DHvKVFlYQILRGLKYLHsA---~ILHRDIKPGNLLVNSNCvLKICDF 200 (449)
T KOG0664|consen 136 TELMQ-SDLHKIIVSPQ----ALTPDHVKVFVYQILRGLKYLHTA---NILHRDIKPGNLLVNSNCILKICDF 200 (449)
T ss_pred HHHHH-hhhhheeccCC----CCCcchhhhhHHHHHhhhHHHhhc---chhhccCCCccEEeccCceEEeccc
Confidence 99885 47777775543 377788888999999999999999 9999999999999999999999998
No 395
>smart00090 RIO RIO-like kinase.
Probab=99.71 E-value=3.2e-17 Score=152.50 Aligned_cols=136 Identities=14% Similarity=0.121 Sum_probs=103.1
Q ss_pred CCCCCCccCccCCceEEEEE--eCCCCEEEEEEcccccccc-----------------------cHHHHHHHHHHHhcCC
Q 013004 300 GFSNKNILGRGGFGKVYKGR--LADGKLVAVKRLKEERTSG-----------------------GELQFQTEVKIISMAV 354 (451)
Q Consensus 300 ~f~~~~~lG~G~fg~Vy~~~--~~~~~~vAvK~~~~~~~~~-----------------------~~~~~~~E~~~l~~l~ 354 (451)
.|+..+.||+|+||.||+|. ..+|+.||||+++...... ....+.+|+..+..+.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 35667889999999999998 5689999999986432100 0113568999999887
Q ss_pred CCC--ccceeeEEecCCeeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCC-eeecCCCC
Q 013004 355 HRN--LLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPK-IIHRDVKA 431 (451)
Q Consensus 355 H~n--iv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~-iiHrDlK~ 431 (451)
+.. +.+.+++ ...++||||++++++........ .....+...++.|++.++.|||+. + |+|||+||
T Consensus 109 ~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~~----~~~~~~~~~i~~qi~~~l~~LH~~---g~iiH~Dikp 177 (237)
T smart00090 109 EAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKDV----EPEEEEEFELYDDILEEMRKLYKE---GELVHGDLSE 177 (237)
T ss_pred hcCCCCCeeeEe----cCceEEEEEecCCcccccccccC----CcchHHHHHHHHHHHHHHHHHHhc---CCEEeCCCCh
Confidence 533 3333332 23589999999988876543221 245556778999999999999999 8 99999999
Q ss_pred CceeeCCCCCccchhh
Q 013004 432 ANILLDEDADQSSKTI 447 (451)
Q Consensus 432 ~NILld~~~~~~i~df 447 (451)
+||+++ ++.+++.||
T Consensus 178 ~NIli~-~~~i~LiDF 192 (237)
T smart00090 178 YNILVH-DGKVVIIDV 192 (237)
T ss_pred hhEEEE-CCCEEEEEC
Confidence 999999 788999887
No 396
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.71 E-value=1.4e-18 Score=168.48 Aligned_cols=143 Identities=24% Similarity=0.302 Sum_probs=123.6
Q ss_pred hcCCCCCCccCccCCceEEEEEeCCC-CEEEEEEcccccc--cccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEE
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLADG-KLVAVKRLKEERT--SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLV 374 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~~~-~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 374 (451)
..+++....||-|+||.|=.++.... ..+|+|.+++... ..+......|-.+|...+.|.||++|..|.+.+..|+.
T Consensus 419 l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmL 498 (732)
T KOG0614|consen 419 LSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYML 498 (732)
T ss_pred hhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhh
Confidence 34556667799999999999887543 3489999876432 22233467889999999999999999999999999999
Q ss_pred EecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 375 YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 375 ~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
||-|-||.+...|++++. ++..++..++..+.+|++|||++ +||+|||||+|.++|.+|-+|+.||
T Consensus 499 mEaClGGElWTiLrdRg~----Fdd~tarF~~acv~EAfeYLH~k---~iIYRDLKPENllLd~~Gy~KLVDF 564 (732)
T KOG0614|consen 499 MEACLGGELWTILRDRGS----FDDYTARFYVACVLEAFEYLHRK---GIIYRDLKPENLLLDNRGYLKLVDF 564 (732)
T ss_pred HHhhcCchhhhhhhhcCC----cccchhhhhHHHHHHHHHHHHhc---CceeccCChhheeeccCCceEEeeh
Confidence 999999999999998754 88899999999999999999999 9999999999999999999999998
No 397
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.71 E-value=6.9e-17 Score=148.06 Aligned_cols=130 Identities=17% Similarity=0.233 Sum_probs=108.4
Q ss_pred CccCccCCceEEEEEeCCCCEEEEEEccccccccc-------HHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEec
Q 013004 305 NILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGG-------ELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 377 (451)
Q Consensus 305 ~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~-------~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey 377 (451)
+.||+|++|.||+|.+ +|..|++|.......... ...+.+|+.++..+.|+++.....++...+..+++|||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 5799999999999987 677899997654322111 12578899999999999988777777777788999999
Q ss_pred CCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 378 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 378 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
++|++|.+.+... .+ .+..++.+++.+|.++|+. +++|||++|+|||++ ++.++++||
T Consensus 81 ~~G~~L~~~~~~~-------~~-~~~~i~~~i~~~l~~lH~~---~i~H~Dl~p~Nil~~-~~~~~liDf 138 (211)
T PRK14879 81 IEGEPLKDLINSN-------GM-EELELSREIGRLVGKLHSA---GIIHGDLTTSNMILS-GGKIYLIDF 138 (211)
T ss_pred eCCcCHHHHHHhc-------cH-HHHHHHHHHHHHHHHHHhC---CcccCCCCcccEEEE-CCCEEEEEC
Confidence 9999999988642 22 7788999999999999999 999999999999999 778889887
No 398
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.70 E-value=1e-16 Score=148.81 Aligned_cols=130 Identities=35% Similarity=0.509 Sum_probs=115.8
Q ss_pred CCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEecCCCCChhHHhhc
Q 013004 311 GFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRE 389 (451)
Q Consensus 311 ~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~ 389 (451)
+||.||+|+.. +++.+|+|++...........+.+|+..++.++|+|++++++++......++++||+++++|.+++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 58999999975 48999999986544332245799999999999999999999999998999999999999999999876
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 390 RQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 390 ~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
... +++.....++.+++.++.|||+. +++|+|++|+||++++++.++++||
T Consensus 81 ~~~----~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~i~~~ni~~~~~~~~~l~d~ 131 (244)
T smart00220 81 RGR----LSEDEARFYARQILSALEYLHSN---GIIHRDLKPENILLDEDGHVKLADF 131 (244)
T ss_pred ccC----CCHHHHHHHHHHHHHHHHHHHHc---CeecCCcCHHHeEECCCCcEEEccc
Confidence 432 78899999999999999999998 9999999999999999999999997
No 399
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.69 E-value=3.5e-17 Score=170.83 Aligned_cols=143 Identities=23% Similarity=0.255 Sum_probs=100.4
Q ss_pred HhcCCCCCCccCccCCceEEEEEeC-C----CCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeE------E
Q 013004 297 ATDGFSNKNILGRGGFGKVYKGRLA-D----GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGF------C 365 (451)
Q Consensus 297 ~~~~f~~~~~lG~G~fg~Vy~~~~~-~----~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~------~ 365 (451)
..++|+..+.||+|+||.||+|++. + ++.||||+++.... ...+..|. +....+.+++.+... +
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~---~e~~~~e~--l~~~~~~~~~~~~~~~~~~~~~ 204 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA---VEIWMNER--VRRACPNSCADFVYGFLEPVSS 204 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch---hHHHHHHH--HHhhchhhHHHHHHhhhccccc
Confidence 4678999999999999999999874 4 68999998754221 11112221 112222233222221 2
Q ss_pred ecCCeeeEEEecCCCCChhHHhhccCCC----------------CCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCC
Q 013004 366 TTVTEKLLVYPYMTNGSVASRLRERQSS----------------LPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDV 429 (451)
Q Consensus 366 ~~~~~~~lv~ey~~~gsL~~~l~~~~~~----------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDl 429 (451)
....+.++|+||+.+++|.+++...... .....+.....++.|++.||+|||+. +|+||||
T Consensus 205 ~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~---gIiHRDL 281 (566)
T PLN03225 205 KKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST---GIVHRDV 281 (566)
T ss_pred ccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC---CEEeCcC
Confidence 3566789999999999999998754210 00112234557899999999999998 9999999
Q ss_pred CCCceeeCC-CCCccchhh
Q 013004 430 KAANILLDE-DADQSSKTI 447 (451)
Q Consensus 430 K~~NILld~-~~~~~i~df 447 (451)
||+|||+++ ++.+||+||
T Consensus 282 KP~NILl~~~~~~~KL~DF 300 (566)
T PLN03225 282 KPQNIIFSEGSGSFKIIDL 300 (566)
T ss_pred CHHHEEEeCCCCcEEEEeC
Confidence 999999996 578999998
No 400
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.69 E-value=6.3e-17 Score=156.50 Aligned_cols=134 Identities=22% Similarity=0.337 Sum_probs=111.7
Q ss_pred cCCCCCCccCccCCceEEEEEe-CCCCEEEEEEcccccccccHHHHHHHHHHHhcCC-----C---CCccceeeEEec--
Q 013004 299 DGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAV-----H---RNLLRLYGFCTT-- 367 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~-----H---~niv~l~~~~~~-- 367 (451)
.+|...+.||-|.|++||+|.+ .+.+.||+|+.+... .-....+.||++++.++ | ..||+|+++|..
T Consensus 78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAq--hYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsG 155 (590)
T KOG1290|consen 78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQ--HYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSG 155 (590)
T ss_pred ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhh--HHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecC
Confidence 5677889999999999999986 457889999986532 12335788999998774 2 469999999875
Q ss_pred --CCeeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCC
Q 013004 368 --VTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDED 439 (451)
Q Consensus 368 --~~~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~ 439 (451)
+.+++||+|++ |-.|..++.....+. ++....+.|++||+.||.|||+.| +|||-||||+|||+..+
T Consensus 156 pNG~HVCMVfEvL-GdnLLklI~~s~YrG--lpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl~~~ 224 (590)
T KOG1290|consen 156 PNGQHVCMVFEVL-GDNLLKLIKYSNYRG--LPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLLCST 224 (590)
T ss_pred CCCcEEEEEehhh-hhHHHHHHHHhCCCC--CcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeeeecc
Confidence 45789999988 668988988765543 888999999999999999999987 99999999999999865
No 401
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.69 E-value=2.9e-17 Score=168.00 Aligned_cols=138 Identities=30% Similarity=0.357 Sum_probs=109.4
Q ss_pred CCCCCccCccCCce-EEEEEeCCCCEEEEEEcccccccccHHHHHHHHHHHhcCC-CCCccceeeEEecCCeeeEEEecC
Q 013004 301 FSNKNILGRGGFGK-VYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAV-HRNLLRLYGFCTTVTEKLLVYPYM 378 (451)
Q Consensus 301 f~~~~~lG~G~fg~-Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lv~ey~ 378 (451)
|...+++|.|+-|+ ||+|.+ +|+.||||++-.+. .....+|+..+..-+ |||||++++.-.+....|+..|.|
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~y-e~R~VAVKrll~e~----~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC 585 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVY-EGREVAVKRLLEEF----FDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELC 585 (903)
T ss_pred eccHHHcccCCCCcEEEEEee-CCceehHHHHhhHh----HHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHh
Confidence 55668899999986 799999 57899999984332 224578999888775 999999998888888999999999
Q ss_pred CCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCC---C--CCccchhh
Q 013004 379 TNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDE---D--ADQSSKTI 447 (451)
Q Consensus 379 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~---~--~~~~i~df 447 (451)
.- +|.+++...........-.....+..|+++||++||+. +||||||||+||||+. + ..++|+||
T Consensus 586 ~~-sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl---~iVHRDLkPQNILI~~~~~~~~~ra~iSDf 655 (903)
T KOG1027|consen 586 AC-SLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSL---KIVHRDLKPQNILISVPSADGTLRAKISDF 655 (903)
T ss_pred hh-hHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhc---ccccccCCCceEEEEccCCCcceeEEeccc
Confidence 65 99999977411111111134467788999999999997 9999999999999987 3 46899998
No 402
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.68 E-value=1.3e-16 Score=144.87 Aligned_cols=126 Identities=17% Similarity=0.236 Sum_probs=101.5
Q ss_pred ccCccCCceEEEEEeCCCCEEEEEEcccccccc-------cHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEecC
Q 013004 306 ILGRGGFGKVYKGRLADGKLVAVKRLKEERTSG-------GELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYM 378 (451)
Q Consensus 306 ~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~-------~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~ 378 (451)
.||+|+||.||+|.+ ++..|++|......... ...++.+|+.++..++|+++.....++...+..+++|||+
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 79 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI 79 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence 489999999999996 57789999864322111 1235778999999999887665555666667789999999
Q ss_pred CCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 379 TNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 379 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
++++|.+.+.... . .++.+++.+|.++|+. +++|||++|+||+++ ++.+++.||
T Consensus 80 ~g~~l~~~~~~~~-----~------~~~~~i~~~l~~lH~~---gi~H~Dl~~~Nil~~-~~~~~liDf 133 (199)
T TIGR03724 80 EGKPLKDVIEEGN-----D------ELLREIGRLVGKLHKA---GIVHGDLTTSNIIVR-DDKLYLIDF 133 (199)
T ss_pred CCccHHHHHhhcH-----H------HHHHHHHHHHHHHHHC---CeecCCCCcceEEEE-CCcEEEEEC
Confidence 9999998875421 0 7889999999999998 999999999999999 788999987
No 403
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.68 E-value=2.7e-17 Score=148.36 Aligned_cols=139 Identities=21% Similarity=0.364 Sum_probs=114.5
Q ss_pred cCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHHHhcC-CCCCccceeeE-EecCCeeeEEE
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMA-VHRNLLRLYGF-CTTVTEKLLVY 375 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~-~~~~~~~~lv~ 375 (451)
+.|...+.+|+|.||++-+++++ +.+.+++|.++..... ..+|.+|...--.+ .|.||+.-+++ |++.+..+.++
T Consensus 24 d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt--~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~q 101 (378)
T KOG1345|consen 24 DVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTT--QADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQ 101 (378)
T ss_pred hhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchhh--HHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEee
Confidence 45777899999999999999975 4678999988654432 34799998765555 49999988875 56677788999
Q ss_pred ecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCC-C-CCccchhh
Q 013004 376 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDE-D-ADQSSKTI 447 (451)
Q Consensus 376 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~-~-~~~~i~df 447 (451)
||++.|||.+-+...+ +.+...++++.|+++|+.|+|++ ++||||||.+|||+-+ | ..+|++||
T Consensus 102 E~aP~gdL~snv~~~G-----igE~~~K~v~~ql~SAi~fMHsk---nlVHRdlK~eNiLif~~df~rvKlcDF 167 (378)
T KOG1345|consen 102 EFAPRGDLRSNVEAAG-----IGEANTKKVFAQLLSAIEFMHSK---NLVHRDLKAENILIFDADFYRVKLCDF 167 (378)
T ss_pred ccCccchhhhhcCccc-----ccHHHHHHHHHHHHHHHHHhhcc---chhhcccccceEEEecCCccEEEeeec
Confidence 9999999998886542 67788899999999999999999 9999999999999854 3 37889988
No 404
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.68 E-value=1.3e-16 Score=144.90 Aligned_cols=131 Identities=22% Similarity=0.171 Sum_probs=101.8
Q ss_pred CCCCCccCccCCceEEEEEeCCCCEEEEEEccccccc---------------------ccHHHHHHHHHHHhcCCCCC--
Q 013004 301 FSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTS---------------------GGELQFQTEVKIISMAVHRN-- 357 (451)
Q Consensus 301 f~~~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~---------------------~~~~~~~~E~~~l~~l~H~n-- 357 (451)
|...+.||+|+||.||+|..++|+.||||+++..... .....+.+|...+..+.|++
T Consensus 17 ~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~ 96 (198)
T cd05144 17 ESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGFP 96 (198)
T ss_pred hhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCCC
Confidence 6667899999999999999888999999987542200 00113567888888888774
Q ss_pred ccceeeEEecCCeeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeC
Q 013004 358 LLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLD 437 (451)
Q Consensus 358 iv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld 437 (451)
+...++ ....+++|||+++++|...... .....++.+++.++.++|+. +|+||||||+||+++
T Consensus 97 v~~~~~----~~~~~lv~e~~~g~~L~~~~~~----------~~~~~~~~~i~~~l~~lh~~---gi~H~Dl~p~Nill~ 159 (198)
T cd05144 97 VPKPID----WNRHAVVMEYIDGVELYRVRVL----------EDPEEVLDEILEEIVKAYKH---GIIHGDLSEFNILVD 159 (198)
T ss_pred CCceee----cCCceEEEEEeCCcchhhcccc----------ccHHHHHHHHHHHHHHHHHC---CCCcCCCCcccEEEc
Confidence 444443 2345899999999998654321 23457888999999999998 999999999999999
Q ss_pred CCCCccchhhh
Q 013004 438 EDADQSSKTIL 448 (451)
Q Consensus 438 ~~~~~~i~df~ 448 (451)
+++.++++||=
T Consensus 160 ~~~~~~liDfg 170 (198)
T cd05144 160 DDEKIYIIDWP 170 (198)
T ss_pred CCCcEEEEECC
Confidence 99999999984
No 405
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.67 E-value=1.6e-16 Score=145.19 Aligned_cols=134 Identities=10% Similarity=0.093 Sum_probs=108.5
Q ss_pred HhcCCCCCCccCccCCceEEEEEeCCCCEEEEEEcccccccccH--H------HHHHHHHHHhcCCCCCccceeeEEecC
Q 013004 297 ATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGE--L------QFQTEVKIISMAVHRNLLRLYGFCTTV 368 (451)
Q Consensus 297 ~~~~f~~~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~--~------~~~~E~~~l~~l~H~niv~l~~~~~~~ 368 (451)
...+|...+++|+|+||.||.... +++.+|||.++........ . .+.+|+..+.++.|++|.....++...
T Consensus 29 l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~ 107 (232)
T PRK10359 29 LSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLA 107 (232)
T ss_pred hhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeec
Confidence 457889999999999999999766 5778999999765432221 1 268999999999999999998875532
Q ss_pred --------CeeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCC
Q 013004 369 --------TEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDA 440 (451)
Q Consensus 369 --------~~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~ 440 (451)
...+++|||++|.+|.+... ++. ....+++.++..+|+. +++|||+||+||+++.++
T Consensus 108 ~~~~~~~~~~~~lvmEyi~G~tL~~~~~--------~~~----~~~~~i~~~l~~lH~~---gi~H~Dikp~Nili~~~g 172 (232)
T PRK10359 108 ERKTLRYAHTYIMLIEYIEGVELNDMPE--------ISE----DVKAKIKASIESLHQH---GMVSGDPHKGNFIVSKNG 172 (232)
T ss_pred ccccccccCCeEEEEEEECCccHHHhhh--------ccH----HHHHHHHHHHHHHHHc---CCccCCCChHHEEEeCCC
Confidence 35789999999999977631 222 2456899999999999 999999999999999988
Q ss_pred Cccchhh
Q 013004 441 DQSSKTI 447 (451)
Q Consensus 441 ~~~i~df 447 (451)
+++.||
T Consensus 173 -i~liDf 178 (232)
T PRK10359 173 -LRIIDL 178 (232)
T ss_pred -EEEEEC
Confidence 999997
No 406
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.67 E-value=2.8e-16 Score=163.92 Aligned_cols=132 Identities=15% Similarity=0.213 Sum_probs=105.2
Q ss_pred cCCCCCCccCccCCceEEEEEeCCCCEEEEEE-ccccccc------ccHHHHHHHHHHHhcCCCCCccceeeEEecCCee
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLADGKLVAVKR-LKEERTS------GGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEK 371 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~~~~~vAvK~-~~~~~~~------~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 371 (451)
..|...+.||+|+||.||+|.+.+.. +++|+ ....... .....+.+|+.++..++|++++....++......
T Consensus 333 ~~~~~~~~iG~G~~g~Vy~~~~~~~~-~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~ 411 (535)
T PRK09605 333 RRKIPDHLIGKGAEADIKKGEYLGRD-AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEK 411 (535)
T ss_pred cccCccceeccCCcEEEEEEeecCcc-ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCC
Confidence 34456789999999999999875443 34443 2221111 1123588999999999999999888888777788
Q ss_pred eEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 372 LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 372 ~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
++||||+++++|.+++. ....++.+++++|.|||+. +++|||+||+|||+ +++.++++||
T Consensus 412 ~lv~E~~~g~~L~~~l~------------~~~~~~~~i~~~L~~lH~~---giiHrDlkp~NILl-~~~~~~liDF 471 (535)
T PRK09605 412 TIVMEYIGGKDLKDVLE------------GNPELVRKVGEIVAKLHKA---GIVHGDLTTSNFIV-RDDRLYLIDF 471 (535)
T ss_pred EEEEEecCCCcHHHHHH------------HHHHHHHHHHHHHHHHHhC---CCccCCCChHHEEE-ECCcEEEEeC
Confidence 99999999999988875 3457899999999999998 99999999999999 5678899987
No 407
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.66 E-value=4.8e-16 Score=139.15 Aligned_cols=126 Identities=18% Similarity=0.146 Sum_probs=99.3
Q ss_pred CCCccCccCCceEEEEEeCCCCEEEEEEccccccccc---HHHHHHHHHHHhcCC-CCCccceeeEEecCCeeeEEEecC
Q 013004 303 NKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGG---ELQFQTEVKIISMAV-HRNLLRLYGFCTTVTEKLLVYPYM 378 (451)
Q Consensus 303 ~~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~---~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lv~ey~ 378 (451)
....|++|+||+||.+.. .+..++.+.+........ ...|.+|+++|+.+. |+++.+++++ +..+++|||+
T Consensus 6 ~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI 80 (218)
T PRK12274 6 VNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSYL 80 (218)
T ss_pred cceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEeee
Confidence 457799999999997765 567788777754432211 124789999999996 5889999886 4479999999
Q ss_pred CCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCC-CCCceeeCCCCCccchhh
Q 013004 379 TNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDV-KAANILLDEDADQSSKTI 447 (451)
Q Consensus 379 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDl-K~~NILld~~~~~~i~df 447 (451)
+|.+|.+.... ....+..|++.++.|+|++ +|+|||| ||+|||++.++.++|+||
T Consensus 81 ~G~~L~~~~~~-----------~~~~~~~qi~~~L~~lH~~---GIvHrDL~kp~NILv~~~g~i~LIDF 136 (218)
T PRK12274 81 AGAAMYQRPPR-----------GDLAYFRAARRLLQQLHRC---GVAHNDLAKEANWLVQEDGSPAVIDF 136 (218)
T ss_pred cCccHHhhhhh-----------hhHHHHHHHHHHHHHHHHC---cCccCCCCCcceEEEcCCCCEEEEEC
Confidence 99998654321 1134678899999999999 9999999 799999999999999998
No 408
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.65 E-value=1.5e-16 Score=159.10 Aligned_cols=137 Identities=24% Similarity=0.356 Sum_probs=113.9
Q ss_pred hcCCCCCCccCccCCceEEEEEe-CCCCEEEEEEcccccccccHHHHHHHHHHHhcC-CCCCccceeeEEecCCeeeEEE
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMA-VHRNLLRLYGFCTTVTEKLLVY 375 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~ 375 (451)
+++|.....+|.|+|+.|-++.. .+++..|||++..... +-.+|+.++... +||||+++.+.+.+..+.|+||
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~-----~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~ 395 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRAD-----DNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVM 395 (612)
T ss_pred chhhccccccCCCCccceeeeeccccccchhheecccccc-----ccccccchhhhhcCCCcceeecceecCCceeeeee
Confidence 56677777899999999999875 5688999999965411 234566555444 6999999999999999999999
Q ss_pred ecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceee-CCCCCccchhh
Q 013004 376 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILL-DEDADQSSKTI 447 (451)
Q Consensus 376 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILl-d~~~~~~i~df 447 (451)
|++.+|-+.+.+..... .. .++..|+.+++.|+.|||++ +||||||||+|||+ ++++..++.||
T Consensus 396 e~l~g~ell~ri~~~~~----~~-~e~~~w~~~lv~Av~~LH~~---gvvhRDLkp~NIL~~~~~g~lrltyF 460 (612)
T KOG0603|consen 396 ELLDGGELLRRIRSKPE----FC-SEASQWAAELVSAVDYLHEQ---GVVHRDLKPGNILLDGSAGHLRLTYF 460 (612)
T ss_pred hhccccHHHHHHHhcch----hH-HHHHHHHHHHHHHHHHHHhc---CeeecCCChhheeecCCCCcEEEEEe
Confidence 99999998888876532 22 67778999999999999999 99999999999999 57888999998
No 409
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.64 E-value=3.7e-16 Score=153.37 Aligned_cols=141 Identities=21% Similarity=0.293 Sum_probs=119.2
Q ss_pred cCCCCCCccCccCCceEEEEEeCCCCEEEEEEccccccccc-HHHHHHHHHHHhcCC-CCCccceeeEEecCCeeeEEEe
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGG-ELQFQTEVKIISMAV-HRNLLRLYGFCTTVTEKLLVYP 376 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~-~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lv~e 376 (451)
..|+..+.||+||.++||++...+.+.||+|++.....+.. ...|..|+..|.+++ |.+||+|++|-..++.+|||||
T Consensus 361 ~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE 440 (677)
T KOG0596|consen 361 REYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVME 440 (677)
T ss_pred chhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEee
Confidence 34777899999999999999988888999998765433322 346999999999997 9999999999999999999999
Q ss_pred cCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 377 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 377 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|-+ -||..+|++.... ...| .++.+..|++.|+.++|.+ +|||-||||.|+|+-. |..|++||
T Consensus 441 ~Gd-~DL~kiL~k~~~~--~~~~-~lk~ywkqML~aV~~IH~~---gIVHSDLKPANFLlVk-G~LKLIDF 503 (677)
T KOG0596|consen 441 CGD-IDLNKILKKKKSI--DPDW-FLKFYWKQMLLAVKTIHQH---GIVHSDLKPANFLLVK-GRLKLIDF 503 (677)
T ss_pred ccc-ccHHHHHHhccCC--CchH-HHHHHHHHHHHHHHHHHHh---ceeecCCCcccEEEEe-eeEEeeee
Confidence 875 5999999886543 2345 7778999999999999999 9999999999999875 46888887
No 410
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.63 E-value=7.6e-16 Score=145.38 Aligned_cols=153 Identities=24% Similarity=0.326 Sum_probs=128.5
Q ss_pred HHHHHHHhcCCCCCCccCccCCceEEEEEeCC------CCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeE
Q 013004 291 LRELQVATDGFSNKNILGRGGFGKVYKGRLAD------GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGF 364 (451)
Q Consensus 291 ~~~~~~~~~~f~~~~~lG~G~fg~Vy~~~~~~------~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~ 364 (451)
.+++....+++....++-+|.||.||+|.|++ .+.|-||.++...++.+...++.|...+..+.|||+.++.++
T Consensus 276 ~~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V 355 (563)
T KOG1024|consen 276 LQELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGV 355 (563)
T ss_pred HHhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEE
Confidence 56677778889999999999999999997653 345778888776666666679999999999999999999999
Q ss_pred EecC-CeeeEEEecCCCCChhHHhhccCCC----CCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCC
Q 013004 365 CTTV-TEKLLVYPYMTNGSVASRLRERQSS----LPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDED 439 (451)
Q Consensus 365 ~~~~-~~~~lv~ey~~~gsL~~~l~~~~~~----~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~ 439 (451)
+.+. +..+..|.++.-|+|..+|...+.. ...++-.+...++.|++.|++|||.+ +|||.||.++|+++|+.
T Consensus 356 ~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~---~ViHkDiAaRNCvIdd~ 432 (563)
T KOG1024|consen 356 SIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNH---GVIHKDIAARNCVIDDQ 432 (563)
T ss_pred EeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhc---Ccccchhhhhcceehhh
Confidence 8764 4578889999999999999843221 12356667889999999999999999 99999999999999999
Q ss_pred CCccchh
Q 013004 440 ADQSSKT 446 (451)
Q Consensus 440 ~~~~i~d 446 (451)
.++|+.|
T Consensus 433 LqVkltD 439 (563)
T KOG1024|consen 433 LQVKLTD 439 (563)
T ss_pred eeEEecc
Confidence 9999887
No 411
>PLN03150 hypothetical protein; Provisional
Probab=99.63 E-value=8.3e-16 Score=162.30 Aligned_cols=117 Identities=37% Similarity=0.605 Sum_probs=101.9
Q ss_pred CCCEEeCcCCccCccCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeeccccccCCCChhhhhcCCCCCeeccC
Q 013004 96 NLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLS 175 (451)
Q Consensus 96 ~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls 175 (451)
.++.|+|++|.++|.+|..++.+++|+.|+|++|+++|.+|..++.+++|+.|+|++|+++|.+|..++.+++|+.|+++
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 37789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCcCCCCCC--CCcccccccccccccCCCCCCCCC
Q 013004 176 NNRLSGPVPDNGS--FSQFTPISFENNLNLCGPNTKKPC 212 (451)
Q Consensus 176 ~N~l~~~~p~~~~--~~~~~~~~~~~n~~lCg~~~~~~c 212 (451)
+|+++|.+|.... +..+..+.+.+|..+|+.+....|
T Consensus 499 ~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p~l~~C 537 (623)
T PLN03150 499 GNSLSGRVPAALGGRLLHRASFNFTDNAGLCGIPGLRAC 537 (623)
T ss_pred CCcccccCChHHhhccccCceEEecCCccccCCCCCCCC
Confidence 9999999996421 223445678899999986554555
No 412
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.63 E-value=7.2e-16 Score=172.45 Aligned_cols=153 Identities=35% Similarity=0.492 Sum_probs=123.6
Q ss_pred chhhhhhhhhhhhhccCCCcceE------------EEeecCCccccccCCccccCCCCCCEEeCcCCccCccCCccccCC
Q 013004 51 LHLLISFLIFIRVLQSSSNLFVY------------LISDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNL 118 (451)
Q Consensus 51 l~~~~~~~~~~~~l~~~~n~~~~------------~~~~l~~n~~~g~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~l 118 (451)
+|..+..++.++.|++++|.+.. ..++|++|.+.|.+|..+ ..++|+.|++++|++++.+|..+.++
T Consensus 420 ~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~-~~~~L~~L~ls~n~l~~~~~~~~~~l 498 (968)
T PLN00113 420 LPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSF-GSKRLENLDLSRNQFSGAVPRKLGSL 498 (968)
T ss_pred CChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCccc-ccccceEEECcCCccCCccChhhhhh
Confidence 34445556666677777665542 345677777777777655 45788889999999999999999999
Q ss_pred CCCcEEeCCCCcCCccCcccccCCcccceeeccccccCCCChhhhhcCCCCCeeccCCccccCcCCCC-CCCCccccccc
Q 013004 119 IKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPDN-GSFSQFTPISF 197 (451)
Q Consensus 119 ~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~-~~~~~~~~~~~ 197 (451)
++|+.|+|++|++.|.+|+.++++++|+.|+|++|.++|.+|..+..+++|+.||+++|+++|.+|.. ..+..+..+.+
T Consensus 499 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~l 578 (968)
T PLN00113 499 SELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNI 578 (968)
T ss_pred hccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999988864 44566777777
Q ss_pred ccccccC
Q 013004 198 ENNLNLC 204 (451)
Q Consensus 198 ~~n~~lC 204 (451)
.+|...+
T Consensus 579 s~N~l~~ 585 (968)
T PLN00113 579 SHNHLHG 585 (968)
T ss_pred cCCccee
Confidence 7776443
No 413
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.61 E-value=1.2e-15 Score=145.74 Aligned_cols=140 Identities=21% Similarity=0.356 Sum_probs=119.2
Q ss_pred HHHhcCCCCCCccCccCCceEEEEEeC----CCCEEEEEEcccccccccHHHHHHHHHHHhcCC-CCCccceeeEEecCC
Q 013004 295 QVATDGFSNKNILGRGGFGKVYKGRLA----DGKLVAVKRLKEERTSGGELQFQTEVKIISMAV-HRNLLRLYGFCTTVT 369 (451)
Q Consensus 295 ~~~~~~f~~~~~lG~G~fg~Vy~~~~~----~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~ 369 (451)
......|...+.||+|.|+.||++.+. ..+.||+|.+...... ....+|++++..+. +.||+++.+++...+
T Consensus 32 p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p---~ri~~El~~L~~~gG~~ni~~~~~~~rnnd 108 (418)
T KOG1167|consen 32 PFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSP---SRILNELEMLYRLGGSDNIIKLNGCFRNND 108 (418)
T ss_pred hhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccCc---hHHHHHHHHHHHhccchhhhcchhhhccCC
Confidence 344567888999999999999999753 3678999998654332 35789999998886 999999999999999
Q ss_pred eeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCC-CCccchhh
Q 013004 370 EKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDED-ADQSSKTI 447 (451)
Q Consensus 370 ~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~-~~~~i~df 447 (451)
...+|+||++.-+..+++.. ++..+...+...+..||.|+|.+ +|||||+||+|+|.+.. +.-.+.||
T Consensus 109 ~v~ivlp~~~H~~f~~l~~~-------l~~~~i~~Yl~~ll~Al~~~h~~---GIvHRDiKpsNFL~n~~t~rg~LvDF 177 (418)
T KOG1167|consen 109 QVAIVLPYFEHDRFRDLYRS-------LSLAEIRWYLRNLLKALAHLHKN---GIVHRDIKPSNFLYNRRTQRGVLVDF 177 (418)
T ss_pred eeEEEecccCccCHHHHHhc-------CCHHHHHHHHHHHHHHhhhhhcc---CccccCCCccccccccccCCceEEec
Confidence 99999999999998888865 66788999999999999999999 99999999999999976 45566666
No 414
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.59 E-value=7.9e-15 Score=126.03 Aligned_cols=129 Identities=17% Similarity=0.131 Sum_probs=107.5
Q ss_pred CCccCccCCceEEEEEeCCCCEEEEEEcccccccccHHHHHHHHHHHhcCCC--CCccceeeEEecCCeeeEEEecCCCC
Q 013004 304 KNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVH--RNLLRLYGFCTTVTEKLLVYPYMTNG 381 (451)
Q Consensus 304 ~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H--~niv~l~~~~~~~~~~~lv~ey~~~g 381 (451)
.+.+|+|.++.||++...+ +.+++|..+.... ...+.+|+..+..++| .++.+++++....+..++++||++++
T Consensus 3 ~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~---~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~ 78 (155)
T cd05120 3 IKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK---GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGE 78 (155)
T ss_pred ceecccccccceEEEEecC-CeEEEEecCCCCc---hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCe
Confidence 4679999999999999854 7899998855332 3468899999999976 58889988888778899999999987
Q ss_pred ChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 382 SVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 382 sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
.+... ++.....++.+++++++++|....++++|+|++|+||++++++.+++.||
T Consensus 79 ~~~~~-----------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df 133 (155)
T cd05120 79 TLDEV-----------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDW 133 (155)
T ss_pred ecccC-----------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEec
Confidence 76533 44566778999999999999875557999999999999999888999887
No 415
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.59 E-value=1.1e-15 Score=141.00 Aligned_cols=138 Identities=25% Similarity=0.309 Sum_probs=111.0
Q ss_pred CCCCCCccCccCCceEEEEEe-CCCCEEEEEEccccc-ccccHHHHHHHHHHHhcCCCCCccceeeEEecC------Cee
Q 013004 300 GFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEER-TSGGELQFQTEVKIISMAVHRNLLRLYGFCTTV------TEK 371 (451)
Q Consensus 300 ~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~------~~~ 371 (451)
+|.....+|.|+- .|..+-+ -.++.||+|++.... ......+..+|..++..++|+||++++.++.-. .+.
T Consensus 18 Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~ 96 (369)
T KOG0665|consen 18 RYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEV 96 (369)
T ss_pred eeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhH
Confidence 4555677888876 4555543 357899999874322 222334678899999999999999999988643 357
Q ss_pred eEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhhh
Q 013004 372 LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 448 (451)
Q Consensus 372 ~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df~ 448 (451)
|+|||||. ++|...+... ++..+...+..|+++|+.|||+. +|+||||||+||++..++..||.||.
T Consensus 97 y~v~e~m~-~nl~~vi~~e------lDH~tis~i~yq~~~~ik~lhs~---~IihRdLkPsnivv~~~~~lKi~dfg 163 (369)
T KOG0665|consen 97 YLVMELMD-ANLCQVILME------LDHETISYILYQMLCGIKHLHSA---GIIHRDLKPSNIVVNSDCTLKILDFG 163 (369)
T ss_pred HHHHHhhh-hHHHHHHHHh------cchHHHHHHHHHHHHHHHHHHhc---ceeecccCcccceecchhheeeccch
Confidence 99999996 5888888732 77888999999999999999999 99999999999999999999999985
No 416
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.57 E-value=3.7e-15 Score=133.84 Aligned_cols=130 Identities=20% Similarity=0.248 Sum_probs=90.7
Q ss_pred CCccCccCCceEEEEEeCCCCEEEEEEccccccccc-HHH----------------------HHHHHHHHhcCCCCC--c
Q 013004 304 KNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGG-ELQ----------------------FQTEVKIISMAVHRN--L 358 (451)
Q Consensus 304 ~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~-~~~----------------------~~~E~~~l~~l~H~n--i 358 (451)
.+.||+|+||+||+|...+++.||||+++....... ... ...|...+..+.+.. +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 367999999999999987899999998865322111 011 124445555544332 3
Q ss_pred cceeeEEecCCeeeEEEecCCCCChhHH-hhccCCCCCCCCHHHHHHHHHHHHHHHHhHhc-CCCCCeeecCCCCCceee
Q 013004 359 LRLYGFCTTVTEKLLVYPYMTNGSVASR-LRERQSSLPPLDWPTRKKIALGSARGLSYLHE-HCDPKIIHRDVKAANILL 436 (451)
Q Consensus 359 v~l~~~~~~~~~~~lv~ey~~~gsL~~~-l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~-~~~~~iiHrDlK~~NILl 436 (451)
.+.+++ ...+++|||++++++... +.... .. .+...++.+++.++.++|. . +|+|||+||+||++
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~-----~~-~~~~~~~~~~~~~l~~lh~~~---~ivH~Dl~p~Nili 148 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR-----LL-EDPEELYDQILELMRKLYREA---GLVHGDLSEYNILV 148 (187)
T ss_pred CceEec----CCCEEEEEEeCCCCccChhhhhhh-----hc-ccHHHHHHHHHHHHHHHhhcc---CcCcCCCChhhEEE
Confidence 333332 246899999999654322 21110 11 5567889999999999998 7 99999999999999
Q ss_pred CCCCCccchhh
Q 013004 437 DEDADQSSKTI 447 (451)
Q Consensus 437 d~~~~~~i~df 447 (451)
+ ++.+++.||
T Consensus 149 ~-~~~~~liDf 158 (187)
T cd05119 149 D-DGKVYIIDV 158 (187)
T ss_pred E-CCcEEEEEC
Confidence 9 888999987
No 417
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.56 E-value=9.2e-15 Score=130.03 Aligned_cols=140 Identities=20% Similarity=0.263 Sum_probs=113.8
Q ss_pred hcCCCCCCccCccCCceEEEEE-eCCCCEEEEEEcccccccccHHHHHHHHHHHhcCCC-CCccceeeEEecCCeeeEEE
Q 013004 298 TDGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVH-RNLLRLYGFCTTVTEKLLVY 375 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~-~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H-~niv~l~~~~~~~~~~~lv~ 375 (451)
...|...+.||.|+||.+|.|. ..+|+.||||.-.... ...++..|..+...++| ..|..+..+..+...-.+||
T Consensus 14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a---~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVM 90 (341)
T KOG1163|consen 14 GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKA---KHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVM 90 (341)
T ss_pred ccceEEEEeecCCchhheeeeeeccCCceEEEEeecccC---CCcchhHHHHHHHHhccCCCCchhhhhccccccceeee
Confidence 4568888999999999999998 4679999999754332 23367788888888874 66777778888888899999
Q ss_pred ecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCC---Cccchhh
Q 013004 376 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDA---DQSSKTI 447 (451)
Q Consensus 376 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~---~~~i~df 447 (451)
|.+ |.||.+...-... .++..+.+..|-|++.-++|+|.+ ++|||||||+|+|..-+- ...++||
T Consensus 91 dLL-GPsLEdLfnfC~R---~ftmkTvLMLaDQml~RiEyvH~r---~fiHRDIKPdNFLMGlgrh~~kl~LIDF 158 (341)
T KOG1163|consen 91 DLL-GPSLEDLFNFCSR---RFTMKTVLMLADQMLSRIEYVHLR---NFIHRDIKPDNFLMGLGRHCNKLYLIDF 158 (341)
T ss_pred ecc-CccHHHHHHHHhh---hhhHHhHHHHHHHHHHHHHHHHhh---ccccccCCccceeeccccccceEEEEec
Confidence 977 7799888765432 488889999999999999999999 899999999999998653 4555665
No 418
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.54 E-value=2.5e-14 Score=139.84 Aligned_cols=141 Identities=21% Similarity=0.277 Sum_probs=112.4
Q ss_pred CCCCCCccCccCCceEEEEEeCCC--CEEEEEEcccccccccHHHHHHHHHHHhcCCC----CCccceeeEE-ecCCeee
Q 013004 300 GFSNKNILGRGGFGKVYKGRLADG--KLVAVKRLKEERTSGGELQFQTEVKIISMAVH----RNLLRLYGFC-TTVTEKL 372 (451)
Q Consensus 300 ~f~~~~~lG~G~fg~Vy~~~~~~~--~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H----~niv~l~~~~-~~~~~~~ 372 (451)
+|...+.||+|+||.||.+..... ..+|+|........... .+..|+.++..+.. +++..+++.. ......+
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~-~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~ 97 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPS-VLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNF 97 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCc-cchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeE
Confidence 688899999999999999986543 47898877554332222 56778888877763 6888888888 4777889
Q ss_pred EEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCC-----Cccchhh
Q 013004 373 LVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDA-----DQSSKTI 447 (451)
Q Consensus 373 lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~-----~~~i~df 447 (451)
+||+.+ |.+|.++..... ...++..+...|+.|++.+|+++|+. +++||||||+|+++.... ...+.||
T Consensus 98 iVM~l~-G~sL~dl~~~~~--~~~fs~~T~l~ia~q~l~~l~~lH~~---G~iHRDiKp~N~~~g~~~~~~~~~~~llDf 171 (322)
T KOG1164|consen 98 IVMSLL-GPSLEDLRKRNP--PGRFSRKTVLRIAIQNLNALEDLHSK---GFIHRDIKPENFVVGQSSRSEVRTLYLLDF 171 (322)
T ss_pred EEEecc-CccHHHHHHhCC--CCCcCHhHHHHHHHHHHHHHHHHHhc---CcccCCcCHHHeeecCCCCcccceEEEEec
Confidence 999966 779998775543 23588999999999999999999999 999999999999999753 4566666
No 419
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.54 E-value=1.6e-16 Score=134.21 Aligned_cols=148 Identities=27% Similarity=0.350 Sum_probs=87.6
Q ss_pred EEeehhHHHhhhhcchhhhhhhhhhhhhccCCCcceEEE-----------eecCCccccccCCccccCCCCCCEEeCcCC
Q 013004 37 LLVTLKAVLQECEQLHLLISFLIFIRVLQSSSNLFVYLI-----------SDLGNAALSGELAPELGQLKNLELLELYGN 105 (451)
Q Consensus 37 ~~~~l~~~~~~~~~l~~~~~~~~~~~~l~~~~n~~~~~~-----------~~l~~n~~~g~~p~~l~~l~~L~~L~ls~N 105 (451)
.+..|+.+++.+.-.|+.|..+..|++|++++|+++-++ ++++-|.+. .+|..+|.++.|+.|||++|
T Consensus 34 ~ITrLtLSHNKl~~vppnia~l~nlevln~~nnqie~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levldltyn 112 (264)
T KOG0617|consen 34 NITRLTLSHNKLTVVPPNIAELKNLEVLNLSNNQIEELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVLDLTYN 112 (264)
T ss_pred hhhhhhcccCceeecCCcHHHhhhhhhhhcccchhhhcChhhhhchhhhheecchhhhh-cCccccCCCchhhhhhcccc
Confidence 344455555666666666666666666666666655221 111222222 35666666666666666666
Q ss_pred ccCc-cCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeeccccccCCCChhhhhcCCCCCeeccCCccccCcCC
Q 013004 106 NLSG-HIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVP 184 (451)
Q Consensus 106 ~l~~-~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p 184 (451)
+++. .+|..|-.++.|+.|+|++|.|. .+|..++++++|+.|.+..|.+- .+|..++.++.|++|.+.+|+++-.+|
T Consensus 113 nl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqgnrl~vlpp 190 (264)
T KOG0617|consen 113 NLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQGNRLTVLPP 190 (264)
T ss_pred ccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhcccceeeecCh
Confidence 6653 35655666666666666666665 56666666666666666666665 356666666666666666666666666
Q ss_pred CCC
Q 013004 185 DNG 187 (451)
Q Consensus 185 ~~~ 187 (451)
..+
T Consensus 191 el~ 193 (264)
T KOG0617|consen 191 ELA 193 (264)
T ss_pred hhh
Confidence 543
No 420
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.53 E-value=3.4e-14 Score=131.86 Aligned_cols=139 Identities=20% Similarity=0.287 Sum_probs=113.8
Q ss_pred cCCCCCCccCccCCceEEEEE-eCCCCEEEEEEcccccccccHHHHHHHHHHHhcCC-CCCccceeeEEecCCeeeEEEe
Q 013004 299 DGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLKEERTSGGELQFQTEVKIISMAV-HRNLLRLYGFCTTVTEKLLVYP 376 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~-~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lv~e 376 (451)
-.|...+.||+|.||..+.|+ +-+++.||||.-... + ...++..|-+..+.+. .+.|...+.+..++..-.||+|
T Consensus 28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrk-S--~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVid 104 (449)
T KOG1165|consen 28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRK-S--EAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVID 104 (449)
T ss_pred ccceeccccccCcceeeecccccccCceEEEEecccc-C--CcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhh
Confidence 357888999999999999997 568999999965322 1 2236778888887775 6899999988888888999999
Q ss_pred cCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCC-----Cccchhh
Q 013004 377 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDA-----DQSSKTI 447 (451)
Q Consensus 377 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~-----~~~i~df 447 (451)
.+ |.||.+...-++. .++..+...+|.|+..-++|+|++ ..|.|||||+|+||..-+ .+++.||
T Consensus 105 LL-GPSLEDLFD~CgR---~FSvKTV~miA~Qmi~rie~vH~k---~LIYRDIKPdNFLIGrp~~k~~n~IhiiDF 173 (449)
T KOG1165|consen 105 LL-GPSLEDLFDLCGR---RFSVKTVAMIAKQMITRIEYVHEK---DLIYRDIKPDNFLIGRPGTKDANVIHIIDF 173 (449)
T ss_pred hh-CcCHHHHHHHhcC---cccHHhHHHHHHHHHHHHHHHHhc---ceeecccCccceeecCCCCCCCceEEEEec
Confidence 77 7788888765543 489999999999999999999999 999999999999998543 3566665
No 421
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.52 E-value=2.1e-14 Score=135.63 Aligned_cols=134 Identities=20% Similarity=0.293 Sum_probs=111.1
Q ss_pred hcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHHHhcCCC--C----CccceeeEEecCCe
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVH--R----NLLRLYGFCTTVTE 370 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H--~----niv~l~~~~~~~~~ 370 (451)
+.+|.....+|+|.||+|-++..+ ++..||||+++.... -..+.+-|+++++++.+ | -+|.+.+++.-.+.
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~k--YreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrgh 165 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDK--YREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGH 165 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHH--HhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCc
Confidence 677888899999999999999854 478999999975432 22346778899988842 1 26788888888999
Q ss_pred eeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCC
Q 013004 371 KLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDED 439 (451)
Q Consensus 371 ~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~ 439 (451)
.++|+|.+ |-|+++++..... .+++......|+.|++++++|||+. .++|-||||+|||+-+.
T Consensus 166 iCivfell-G~S~~dFlk~N~y--~~fpi~~ir~m~~QL~~sv~fLh~~---kl~HTDLKPENILfvss 228 (415)
T KOG0671|consen 166 ICIVFELL-GLSTFDFLKENNY--IPFPIDHIRHMGYQLLESVAFLHDL---KLTHTDLKPENILFVSS 228 (415)
T ss_pred eEEEEecc-ChhHHHHhccCCc--cccchHHHHHHHHHHHHHHHHHHhc---ceeecCCChheEEEecc
Confidence 99999977 6699999987543 4588899999999999999999999 99999999999999754
No 422
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.51 E-value=9.5e-14 Score=129.48 Aligned_cols=131 Identities=16% Similarity=0.186 Sum_probs=99.1
Q ss_pred CCccC-ccCCceEEEEEeCCCCEEEEEEccccc------c------cccHHHHHHHHHHHhcCCCCCc--cceeeEEecC
Q 013004 304 KNILG-RGGFGKVYKGRLADGKLVAVKRLKEER------T------SGGELQFQTEVKIISMAVHRNL--LRLYGFCTTV 368 (451)
Q Consensus 304 ~~~lG-~G~fg~Vy~~~~~~~~~vAvK~~~~~~------~------~~~~~~~~~E~~~l~~l~H~ni--v~l~~~~~~~ 368 (451)
...|| .|+.|+||.++.. +..++||.+.... . ......+.+|++++..++|+++ +..+++....
T Consensus 36 ~~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred CceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 35687 7899999999874 6788999874311 0 0112357889999999998875 6666664432
Q ss_pred C----eeeEEEecCCC-CChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCcc
Q 013004 369 T----EKLLVYPYMTN-GSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQS 443 (451)
Q Consensus 369 ~----~~~lv~ey~~~-gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~ 443 (451)
. ..++|+||+++ .+|.+++... .++.. ...+++.++.+||+. +|+||||||+|||++.++.++
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~~~-----~l~~~----~~~~i~~~l~~lH~~---GI~HrDlkp~NILv~~~~~v~ 182 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQEA-----PLSEE----QWQAIGQLIARFHDA---GVYHADLNAHNILLDPDGKFW 182 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHhcC-----CCCHH----HHHHHHHHHHHHHHC---CCCCCCCCchhEEEcCCCCEE
Confidence 2 23599999997 6898887542 13332 356889999999999 999999999999999988999
Q ss_pred chhh
Q 013004 444 SKTI 447 (451)
Q Consensus 444 i~df 447 (451)
++||
T Consensus 183 LIDf 186 (239)
T PRK01723 183 LIDF 186 (239)
T ss_pred EEEC
Confidence 9998
No 423
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.51 E-value=6e-16 Score=130.80 Aligned_cols=113 Identities=29% Similarity=0.506 Sum_probs=63.7
Q ss_pred CCccccCCCCCCEEeCcCCccCccCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeeccccccCC-CChhhhhc
Q 013004 87 LAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSG-LIPTSLTT 165 (451)
Q Consensus 87 ~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~-~~p~~~~~ 165 (451)
+||.+..|.+|+.|++++|++. .+|..++++++|+.|+++-|++. .+|..|++++.|+.|||++|++.. .+|..|.-
T Consensus 48 vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levldltynnl~e~~lpgnff~ 125 (264)
T KOG0617|consen 48 VPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVLDLTYNNLNENSLPGNFFY 125 (264)
T ss_pred cCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhhhccccccccccCCcchhH
Confidence 5555555666666666666655 55555566666666666666555 555556666666666665555542 24555555
Q ss_pred CCCCCeeccCCccccCcCCCCCCCCccccccccccc
Q 013004 166 ITSLNILDLSNNRLSGPVPDNGSFSQFTPISFENNL 201 (451)
Q Consensus 166 l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~ 201 (451)
+..|+.|.++.|.|.-.+|+.+.+..+..+....|.
T Consensus 126 m~tlralyl~dndfe~lp~dvg~lt~lqil~lrdnd 161 (264)
T KOG0617|consen 126 MTTLRALYLGDNDFEILPPDVGKLTNLQILSLRDND 161 (264)
T ss_pred HHHHHHHHhcCCCcccCChhhhhhcceeEEeeccCc
Confidence 555555555555555555555555555555444443
No 424
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.51 E-value=1.8e-13 Score=131.90 Aligned_cols=142 Identities=34% Similarity=0.467 Sum_probs=120.8
Q ss_pred CCCCCccCccCCceEEEEEeCCCCEEEEEEccccccccc--HHHHHHHHHHHhcCCCC-CccceeeEEecCCeeeEEEec
Q 013004 301 FSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGG--ELQFQTEVKIISMAVHR-NLLRLYGFCTTVTEKLLVYPY 377 (451)
Q Consensus 301 f~~~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~--~~~~~~E~~~l~~l~H~-niv~l~~~~~~~~~~~lv~ey 377 (451)
|...+.+|.|+||.||++... ..+|+|.+........ ...+.+|+..+..+.|+ +++++.+++......+++++|
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY 79 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence 455678999999999999976 7899999876554432 55799999999999988 799999999777778999999
Q ss_pred CCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCC-Cccchhhh
Q 013004 378 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDA-DQSSKTIL 448 (451)
Q Consensus 378 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~-~~~i~df~ 448 (451)
+.++++.+.+...... ..+.......+..|++.++.|+|+. +++|||+||+||+++.++ ..++.||-
T Consensus 80 ~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~H~~---~~~hrd~kp~nil~~~~~~~~~l~dfg 147 (384)
T COG0515 80 VDGGSLEDLLKKIGRK-GPLSESEALFILAQILSALEYLHSK---GIIHRDIKPENILLDRDGRVVKLIDFG 147 (384)
T ss_pred CCCCcHHHHHHhcccc-cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeecCCCCeEEEeccC
Confidence 9999999777654311 2478889999999999999999999 899999999999999998 69999985
No 425
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.48 E-value=2e-15 Score=143.08 Aligned_cols=111 Identities=33% Similarity=0.476 Sum_probs=83.5
Q ss_pred cCCccccCCCCCCEEeCcCCccCccCCccccCCCCCcEEeCCCCcCCccCccccc-CCcccceeeccccccCCCChhhhh
Q 013004 86 ELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLA-NLKQLKYLRLNNNSLSGLIPTSLT 164 (451)
Q Consensus 86 ~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~-~l~~L~~L~ls~N~l~~~~p~~~~ 164 (451)
.+|++++.+..|..|+|.+|.+. ++| +|++|..|.+|.++.|++. .+|.+.. .+.++..|||.+|+++ +.|..+.
T Consensus 197 tlP~~lg~l~~L~~LyL~~Nki~-~lP-ef~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklk-e~Pde~c 272 (565)
T KOG0472|consen 197 TLPPELGGLESLELLYLRRNKIR-FLP-EFPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLK-EVPDEIC 272 (565)
T ss_pred cCChhhcchhhhHHHHhhhcccc-cCC-CCCccHHHHHHHhcccHHH-hhHHHHhcccccceeeeccccccc-cCchHHH
Confidence 45555555555555555555555 455 5555555666666666665 5666554 7889999999999998 6899999
Q ss_pred cCCCCCeeccCCccccCcCCCCCCCCccccccccccc
Q 013004 165 TITSLNILDLSNNRLSGPVPDNGSFSQFTPISFENNL 201 (451)
Q Consensus 165 ~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~ 201 (451)
-+.+|+.||+|+|.+++.+++.+.+ .+....+.||+
T Consensus 273 lLrsL~rLDlSNN~is~Lp~sLgnl-hL~~L~leGNP 308 (565)
T KOG0472|consen 273 LLRSLERLDLSNNDISSLPYSLGNL-HLKFLALEGNP 308 (565)
T ss_pred HhhhhhhhcccCCccccCCcccccc-eeeehhhcCCc
Confidence 9999999999999999999998887 78888888886
No 426
>PLN03150 hypothetical protein; Provisional
Probab=99.48 E-value=1.5e-13 Score=145.15 Aligned_cols=113 Identities=35% Similarity=0.570 Sum_probs=103.3
Q ss_pred eEEEeecCCccccccCCccccCCCCCCEEeCcCCccCccCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeecc
Q 013004 72 VYLISDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLN 151 (451)
Q Consensus 72 ~~~~~~l~~n~~~g~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls 151 (451)
....++|++|.+.|.+|++++.+++|+.|+|++|+++|.+|+.++.+++|+.|+|++|+++|.+|+.++++++|+.|+|+
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 35678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCChhhhhcC-CCCCeeccCCccccCcCC
Q 013004 152 NNSLSGLIPTSLTTI-TSLNILDLSNNRLSGPVP 184 (451)
Q Consensus 152 ~N~l~~~~p~~~~~l-~~L~~l~ls~N~l~~~~p 184 (451)
+|+++|.+|..++.. .++..+++++|......|
T Consensus 499 ~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p 532 (623)
T PLN03150 499 GNSLSGRVPAALGGRLLHRASFNFTDNAGLCGIP 532 (623)
T ss_pred CCcccccCChHHhhccccCceEEecCCccccCCC
Confidence 999999999998764 467889999997554444
No 427
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.39 E-value=8.1e-13 Score=133.74 Aligned_cols=138 Identities=22% Similarity=0.258 Sum_probs=96.0
Q ss_pred CCCCCCccCccCCceEEEEEeCCCCEEEEEEcccccccc---------------------------------------cH
Q 013004 300 GFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSG---------------------------------------GE 340 (451)
Q Consensus 300 ~f~~~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~---------------------------------------~~ 340 (451)
.|+ .+.||.|++|+||+|++++|+.||||+.++..... .+
T Consensus 119 ~fd-~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~E 197 (437)
T TIGR01982 119 EFE-EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRE 197 (437)
T ss_pred hCC-CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHH
Confidence 344 36799999999999999999999999986532100 00
Q ss_pred HHHHHHHHHHhcC----CCCCccceeeEEe-cCCeeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHH-HHH
Q 013004 341 LQFQTEVKIISMA----VHRNLLRLYGFCT-TVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSAR-GLS 414 (451)
Q Consensus 341 ~~~~~E~~~l~~l----~H~niv~l~~~~~-~~~~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~-~L~ 414 (451)
.+|.+|++.+.++ +|.+-+.+-.++. .....++||||++|+++.+........ . ....++..++. .+.
T Consensus 198 ldf~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~---~---~~~~ia~~~~~~~l~ 271 (437)
T TIGR01982 198 LDLRREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAG---L---DRKALAENLARSFLN 271 (437)
T ss_pred HCHHHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcC---C---CHHHHHHHHHHHHHH
Confidence 1255566655544 2333333333332 244579999999999998876532111 2 23456666655 467
Q ss_pred hHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 415 YLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 415 yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
.+|.. +++|+|+||.||++++++.+++.||
T Consensus 272 ql~~~---g~~H~D~hPgNilv~~~g~i~liDf 301 (437)
T TIGR01982 272 QVLRD---GFFHADLHPGNIFVLKDGKIIALDF 301 (437)
T ss_pred HHHhC---CceeCCCCcccEEECCCCcEEEEeC
Confidence 88888 9999999999999999999999987
No 428
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.39 E-value=2.4e-13 Score=145.20 Aligned_cols=144 Identities=22% Similarity=0.269 Sum_probs=110.5
Q ss_pred HHHHHhcCCCCCCccCccCCceEEEEEeCCCCEEEEEEcccccccccHHHHHHHHHHHhcCC---CCCccceeeEEecCC
Q 013004 293 ELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAV---HRNLLRLYGFCTTVT 369 (451)
Q Consensus 293 ~~~~~~~~f~~~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~---H~niv~l~~~~~~~~ 369 (451)
+.++..+.|.+.+.+|+|+||+||+|...+|+.||+|.-+....++-- +. ..++.+++ -+.|..+..+..-.+
T Consensus 692 ~~~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WEfY--I~--~q~~~RLk~~~~~~~~~~~~a~~~~~ 767 (974)
T KOG1166|consen 692 EFEVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWEFY--IC--LQVMERLKPQMLPSIMHISSAHVFQN 767 (974)
T ss_pred eeeecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCceeee--eh--HHHHHhhchhhhcchHHHHHHHccCC
Confidence 344556678888999999999999999888999999987765554321 11 12233333 244555555556677
Q ss_pred eeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCC-------CCc
Q 013004 370 EKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDED-------ADQ 442 (451)
Q Consensus 370 ~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~-------~~~ 442 (451)
..++|+||.+.|+|.+++... ...+|.-.+.++.|++.-++.||.. +|||+||||+|.||-.. ...
T Consensus 768 ~S~lv~ey~~~Gtlld~~N~~----~~m~e~lv~~~~~qml~ive~lH~~---~IIHgDiKPDNfll~~~~~~~~~~~~l 840 (974)
T KOG1166|consen 768 ASVLVSEYSPYGTLLDLINTN----KVMDEYLVMFFSCQMLRIVEHLHAM---GIIHGDIKPDNFLLRREICADSDSKGL 840 (974)
T ss_pred cceeeeeccccccHHHhhccC----CCCCchhhhHHHHHHHHHHHHHHhc---ceecccCCcceeEeecccCCCCcccce
Confidence 889999999999999999743 2489999999999999999999999 99999999999999532 245
Q ss_pred cchhh
Q 013004 443 SSKTI 447 (451)
Q Consensus 443 ~i~df 447 (451)
+|+||
T Consensus 841 ~lIDf 845 (974)
T KOG1166|consen 841 YLIDF 845 (974)
T ss_pred EEEec
Confidence 77776
No 429
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.36 E-value=8.9e-13 Score=128.83 Aligned_cols=143 Identities=20% Similarity=0.235 Sum_probs=117.5
Q ss_pred hcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHHHhcCC------CCCccceeeEEecCCe
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAV------HRNLLRLYGFCTTVTE 370 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~------H~niv~l~~~~~~~~~ 370 (451)
-..|......|+|-|+.|.+|... .|+.||||++..... -...=+.|+++|.+++ --|.++++..|...++
T Consensus 431 D~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~--M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknH 508 (752)
T KOG0670|consen 431 DSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEV--MHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNH 508 (752)
T ss_pred cceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchH--HhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcce
Confidence 456777778899999999999864 478999999965422 1224468999998885 3578999999999999
Q ss_pred eeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCC-Cccchhh
Q 013004 371 KLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDA-DQSSKTI 447 (451)
Q Consensus 371 ~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~-~~~i~df 447 (451)
++||+|-+. -.|.+.|.+.+. ...|.......++.|+.-||..|-.. +|+|.||||.|||+++.. ..|++||
T Consensus 509 LClVFE~Ls-lNLRevLKKyG~-nvGL~ikaVRsYaqQLflALklLK~c---~vlHaDIKPDNiLVNE~k~iLKLCDf 581 (752)
T KOG0670|consen 509 LCLVFEPLS-LNLREVLKKYGR-NVGLHIKAVRSYAQQLFLALKLLKKC---GVLHADIKPDNILVNESKNILKLCDF 581 (752)
T ss_pred eEEEehhhh-chHHHHHHHhCc-ccceeehHHHHHHHHHHHHHHHHHhc---CeeecccCccceEeccCcceeeeccC
Confidence 999999775 489999987643 33477788889999999999999987 999999999999999874 6799998
No 430
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.33 E-value=7.3e-14 Score=139.03 Aligned_cols=112 Identities=29% Similarity=0.424 Sum_probs=72.6
Q ss_pred CCccccCCCCCCEEeCcCCccCccCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeeccccccCCCChhhhhcC
Q 013004 87 LAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTI 166 (451)
Q Consensus 87 ~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l 166 (451)
+|+++..|.||..+|||.|++. .+|+.+-.+.+|+.|+||+|+++ .+--..+.+.+|++|+||.|+++ .+|+++..+
T Consensus 214 ~Ptsld~l~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~it-eL~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL 290 (1255)
T KOG0444|consen 214 IPTSLDDLHNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKIT-ELNMTEGEWENLETLNLSRNQLT-VLPDAVCKL 290 (1255)
T ss_pred CCCchhhhhhhhhccccccCCC-cchHHHhhhhhhheeccCcCcee-eeeccHHHHhhhhhhccccchhc-cchHHHhhh
Confidence 4555555556666666666665 55666666666666666666665 55555556667777777777776 568888888
Q ss_pred CCCCeeccCCcccc--CcCCCCCCCCccccccccccc
Q 013004 167 TSLNILDLSNNRLS--GPVPDNGSFSQFTPISFENNL 201 (451)
Q Consensus 167 ~~L~~l~ls~N~l~--~~~p~~~~~~~~~~~~~~~n~ 201 (451)
++|+.|.+.+|+++ |.+.-.|.+..+..++.++|.
T Consensus 291 ~kL~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN~ 327 (1255)
T KOG0444|consen 291 TKLTKLYANNNKLTFEGIPSGIGKLIQLEVFHAANNK 327 (1255)
T ss_pred HHHHHHHhccCcccccCCccchhhhhhhHHHHhhccc
Confidence 88888888888664 433334566666666666664
No 431
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=99.32 E-value=2.3e-13 Score=134.69 Aligned_cols=169 Identities=25% Similarity=0.218 Sum_probs=131.9
Q ss_pred ccceEEEeehhHHHhhhhcchhhh-hhhhhhhhhccCCCcceEE------------------------------------
Q 013004 32 ARGFTLLVTLKAVLQECEQLHLLI-SFLIFIRVLQSSSNLFVYL------------------------------------ 74 (451)
Q Consensus 32 ~~~~~~~~~l~~~~~~~~~l~~~~-~~~~~~~~l~~~~n~~~~~------------------------------------ 74 (451)
-.+|++|.+|..+-+.+++||.-. ..++.|+.|++..|++...
T Consensus 193 F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme 272 (873)
T KOG4194|consen 193 FDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKME 272 (873)
T ss_pred ccccchheeeecccCcccccCHHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhhhcCcccccCcceeeecccc
Confidence 566778888888888999998874 4488888888888876431
Q ss_pred EeecCCccccccCCccccCCCCCCEEeCcCCccCccCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeeccccc
Q 013004 75 ISDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNS 154 (451)
Q Consensus 75 ~~~l~~n~~~g~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~ 154 (451)
.++|..|+++..--.++.+|+.|+.|+||+|.|....++.+..+.+|++|+||+|+++..-|..|..|.+|+.|+|++|.
T Consensus 273 ~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Ns 352 (873)
T KOG4194|consen 273 HLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNS 352 (873)
T ss_pred eeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccc
Confidence 23555666665445677889999999999999999999999999999999999999996666778888889999999999
Q ss_pred cCCCChhhhhcCCCCCeeccCCccccCcCCCCC----CCCcccccccccc
Q 013004 155 LSGLIPTSLTTITSLNILDLSNNRLSGPVPDNG----SFSQFTPISFENN 200 (451)
Q Consensus 155 l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~~----~~~~~~~~~~~~n 200 (451)
++..--..|..+++|+.|||++|.+++.|-+.. .+.+++.+.+.||
T Consensus 353 i~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gN 402 (873)
T KOG4194|consen 353 IDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGN 402 (873)
T ss_pred hHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhheeecCc
Confidence 887666678888889999999999887765531 1344444444444
No 432
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.29 E-value=5.7e-13 Score=132.78 Aligned_cols=137 Identities=30% Similarity=0.419 Sum_probs=113.9
Q ss_pred hhHHHhhhhcchhhhhhhhhhhhhccCCCcceEEEeec-----------CCccc-cccCCccccCCCCCCEEeCcCCccC
Q 013004 41 LKAVLQECEQLHLLISFLIFIRVLQSSSNLFVYLISDL-----------GNAAL-SGELAPELGQLKNLELLELYGNNLS 108 (451)
Q Consensus 41 l~~~~~~~~~l~~~~~~~~~~~~l~~~~n~~~~~~~~l-----------~~n~~-~g~~p~~l~~l~~L~~L~ls~N~l~ 108 (451)
|+..-..+.++|..++.+..|+.|++++|+++...-+| ..|++ ...+|+++..|..|+.||||+|++.
T Consensus 37 LkLnrt~L~~vPeEL~~lqkLEHLs~~HN~L~~vhGELs~Lp~LRsv~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~ 116 (1255)
T KOG0444|consen 37 LKLNRTKLEQVPEELSRLQKLEHLSMAHNQLISVHGELSDLPRLRSVIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR 116 (1255)
T ss_pred EEechhhhhhChHHHHHHhhhhhhhhhhhhhHhhhhhhccchhhHHHhhhccccccCCCCchhcccccceeeecchhhhh
Confidence 33344467788888888899999999998876543222 24444 3459999999999999999999998
Q ss_pred ccCCccccCCCCCcEEeCCCCcCCccCccc-ccCCcccceeeccccccCCCChhhhhcCCCCCeeccCCcccc
Q 013004 109 GHIPSALGNLIKLKSLDLYSNLFNGTIPDT-LANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSNNRLS 180 (451)
Q Consensus 109 ~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~-~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~ 180 (451)
+.|..+..-.++-.|+||+|++. .||.. |.+|+.|-+||||+|.+.. +|..+..+..|++|+||+|++.
T Consensus 117 -EvP~~LE~AKn~iVLNLS~N~Ie-tIPn~lfinLtDLLfLDLS~NrLe~-LPPQ~RRL~~LqtL~Ls~NPL~ 186 (1255)
T KOG0444|consen 117 -EVPTNLEYAKNSIVLNLSYNNIE-TIPNSLFINLTDLLFLDLSNNRLEM-LPPQIRRLSMLQTLKLSNNPLN 186 (1255)
T ss_pred -hcchhhhhhcCcEEEEcccCccc-cCCchHHHhhHhHhhhccccchhhh-cCHHHHHHhhhhhhhcCCChhh
Confidence 89999999999999999999998 78876 5789999999999999985 5667889999999999999884
No 433
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.25 E-value=5.8e-12 Score=129.20 Aligned_cols=139 Identities=20% Similarity=0.214 Sum_probs=88.3
Q ss_pred hcCCCCCCccCccCCceEEEEEeCC-CCEEEEEEccccccc---------------------c-----------------
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLAD-GKLVAVKRLKEERTS---------------------G----------------- 338 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~---------------------~----------------- 338 (451)
-++|+. +.||+|++|+||+|++++ |+.||||+.++.... .
T Consensus 119 F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l 197 (537)
T PRK04750 119 FDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTL 197 (537)
T ss_pred HHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHH
Confidence 345666 789999999999999887 999999999754210 0
Q ss_pred -cHHHHHHHHHHHhcCC----CCCccceeeEEec-CCeeeEEEecCCCCChhHHh--hccCCCCCCCCHHHHHHHHHHHH
Q 013004 339 -GELQFQTEVKIISMAV----HRNLLRLYGFCTT-VTEKLLVYPYMTNGSVASRL--RERQSSLPPLDWPTRKKIALGSA 410 (451)
Q Consensus 339 -~~~~~~~E~~~l~~l~----H~niv~l~~~~~~-~~~~~lv~ey~~~gsL~~~l--~~~~~~~~~l~~~~~~~i~~~ia 410 (451)
.+.+|.+|+..+.+++ +.+.+.+-.++.+ ....++||||++|+.+.+.- .........+.......+..|
T Consensus 198 ~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Q-- 275 (537)
T PRK04750 198 HDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQ-- 275 (537)
T ss_pred HHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHH--
Confidence 0012455665554442 4444444444433 45678999999999997642 222110001111122222233
Q ss_pred HHHHhHhcCCCCCeeecCCCCCceeeCCCC----Cccchhh
Q 013004 411 RGLSYLHEHCDPKIIHRDVKAANILLDEDA----DQSSKTI 447 (451)
Q Consensus 411 ~~L~yLH~~~~~~iiHrDlK~~NILld~~~----~~~i~df 447 (451)
+... +++|+|+||.||+++.++ ..++.||
T Consensus 276 -----if~~---GffHaDpHPGNIlv~~~g~~~~~i~llDF 308 (537)
T PRK04750 276 -----VFRD---GFFHADMHPGNIFVSYDPPENPRYIALDF 308 (537)
T ss_pred -----HHhC---CeeeCCCChHHeEEecCCCCCCeEEEEec
Confidence 2345 899999999999999987 7888887
No 434
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.24 E-value=3.9e-12 Score=115.21 Aligned_cols=137 Identities=25% Similarity=0.420 Sum_probs=113.0
Q ss_pred CccCccCCceEEEEEeCCCCEEEEEEccccc-ccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEecCCCCCh
Q 013004 305 NILGRGGFGKVYKGRLADGKLVAVKRLKEER-TSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSV 383 (451)
Q Consensus 305 ~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~gsL 383 (451)
..|.+...|+.|+|+|..+ .+.+|+++... +.....+|.+|.-.+....||||..++|.|.++....++..||+.|+|
T Consensus 196 tkl~e~hsgelwrgrwqgn-divakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~gsl 274 (448)
T KOG0195|consen 196 TKLAESHSGELWRGRWQGN-DIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFGSL 274 (448)
T ss_pred hhhccCCCcccccccccCc-chhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccchHH
Confidence 4477888999999999654 44557765432 222344799999999999999999999999999999999999999999
Q ss_pred hHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccch
Q 013004 384 ASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSK 445 (451)
Q Consensus 384 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~ 445 (451)
+..|++... ...+..++.+++.++|+|++|||+. .|-|.---|.+..+++|+|.+++|+
T Consensus 275 ynvlhe~t~--vvvd~sqav~faldiargmaflhsl-ep~ipr~~lns~hvmidedltaris 333 (448)
T KOG0195|consen 275 YNVLHEQTS--VVVDHSQAVRFALDIARGMAFLHSL-EPMIPRFYLNSKHVMIDEDLTARIS 333 (448)
T ss_pred HHHHhcCcc--EEEecchHHHHHHHHHhhHHHHhhc-chhhhhhhcccceEEecchhhhhee
Confidence 999998654 3467889999999999999999997 4445556799999999999988874
No 435
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.22 E-value=2.6e-12 Score=122.20 Aligned_cols=112 Identities=32% Similarity=0.552 Sum_probs=71.6
Q ss_pred CccccCCCCCCEEeCcCCccCccCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeeccccccCCCChhhhhcCC
Q 013004 88 APELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTIT 167 (451)
Q Consensus 88 p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~ 167 (451)
|..++++++|+.|+|++|.+. .+|.+++.+..|+.||+|.|+|. .+|..+..+..|+.+-.++|++...-|+.+.++.
T Consensus 428 ~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lEtllas~nqi~~vd~~~l~nm~ 505 (565)
T KOG0472|consen 428 PLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFR-MLPECLYELQTLETLLASNNQIGSVDPSGLKNMR 505 (565)
T ss_pred hHHHHhhhcceeeecccchhh-hcchhhhhhhhhheecccccccc-cchHHHhhHHHHHHHHhccccccccChHHhhhhh
Confidence 344455555666666666655 56666666666666666666665 5665555555555555555666544455577777
Q ss_pred CCCeeccCCccccCcCCCCCCCCccccccccccc
Q 013004 168 SLNILDLSNNRLSGPVPDNGSFSQFTPISFENNL 201 (451)
Q Consensus 168 ~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~ 201 (451)
+|..||+.+|.+..-+|..|.+.+++.....||+
T Consensus 506 nL~tLDL~nNdlq~IPp~LgnmtnL~hLeL~gNp 539 (565)
T KOG0472|consen 506 NLTTLDLQNNDLQQIPPILGNMTNLRHLELDGNP 539 (565)
T ss_pred hcceeccCCCchhhCChhhccccceeEEEecCCc
Confidence 7888888888777777777777777777666663
No 436
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.22 E-value=3.9e-11 Score=105.69 Aligned_cols=126 Identities=20% Similarity=0.180 Sum_probs=90.5
Q ss_pred CCccCccCCceEEEEEeCCCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCcc-ceeeEEecCCeeeEEEecCCCCC
Q 013004 304 KNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLL-RLYGFCTTVTEKLLVYPYMTNGS 382 (451)
Q Consensus 304 ~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv-~l~~~~~~~~~~~lv~ey~~~gs 382 (451)
.+.++.|.++.||+++.. ++.|++|....... ....+..|+..+..+.+.+++ +++.+. ....++||||+++.+
T Consensus 3 ~~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G~~ 77 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE--LLINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEGSE 77 (170)
T ss_pred eeecCCcccCceEEEEEC-CeEEEEEeCCCCcc--cccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCCCc
Confidence 356889999999999875 67899998754321 123467888888887665554 444433 234589999999988
Q ss_pred hhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCC--CCCeeecCCCCCceeeCCCCCccchhh
Q 013004 383 VASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHC--DPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 383 L~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~--~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+... . . ....++.+++++++.||+.. ...++|+|++|.||+++ ++.+++.||
T Consensus 78 l~~~--~-------~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf 131 (170)
T cd05151 78 LLTE--D-------F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDW 131 (170)
T ss_pred cccc--c-------c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEec
Confidence 7542 0 0 11235678999999999972 22369999999999999 557788887
No 437
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=99.18 E-value=2.2e-12 Score=127.87 Aligned_cols=163 Identities=26% Similarity=0.282 Sum_probs=91.1
Q ss_pred eeceeee-ceeccceEEEeehhHHHhhhhcchhh-hh------------------------hhhhhhhhccCCCcceE--
Q 013004 22 RVGIICL-GICARGFTLLVTLKAVLQECEQLHLL-IS------------------------FLIFIRVLQSSSNLFVY-- 73 (451)
Q Consensus 22 ~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~l~~~-~~------------------------~~~~~~~l~~~~n~~~~-- 73 (451)
|--|..+ +..-+|+.+++++...-+.++.|.+- +- +++.|+.|++|+|.+..
T Consensus 230 rN~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih 309 (873)
T KOG4194|consen 230 RNRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIH 309 (873)
T ss_pred ccceeeehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheee
Confidence 4444444 56677888888887776677776553 22 23444555555554432
Q ss_pred ----------EEeecCCccccccCCccccCCCCCCEEeCcCCccCccCCccccCCCCCcEEeCCCCcCCccCcc---ccc
Q 013004 74 ----------LISDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPD---TLA 140 (451)
Q Consensus 74 ----------~~~~l~~n~~~g~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~---~~~ 140 (451)
.-++|++|+++---+.++..|..|++|+|++|+++..--..|..+++|+.|||++|.+++.+-+ .|.
T Consensus 310 ~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~ 389 (873)
T KOG4194|consen 310 IDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFN 389 (873)
T ss_pred cchhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhc
Confidence 1234555555433333444455555555555555543344455555666666666666555543 245
Q ss_pred CCcccceeeccccccCCCChhhhhcCCCCCeeccCCccccCcCC
Q 013004 141 NLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVP 184 (451)
Q Consensus 141 ~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p 184 (451)
.|++|+.|+|-+|+++...-.+|..+.+|+.|||.+|.+...-|
T Consensus 390 gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~ 433 (873)
T KOG4194|consen 390 GLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQP 433 (873)
T ss_pred cchhhhheeecCceeeecchhhhccCcccceecCCCCcceeecc
Confidence 56666666666676664333466666677777777766654333
No 438
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.12 E-value=3e-11 Score=132.28 Aligned_cols=88 Identities=11% Similarity=0.025 Sum_probs=68.3
Q ss_pred CCC-CCccceeeEEe-------cCCeeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCe
Q 013004 353 AVH-RNLLRLYGFCT-------TVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKI 424 (451)
Q Consensus 353 l~H-~niv~l~~~~~-------~~~~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~i 424 (451)
.+| +||+++++++. .....+.++||+ +++|.+++.... ..+++.++..++.||++||.|||++ +|
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~al~~lH~~---gI 101 (793)
T PLN00181 29 LSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPD---RSVDAFECFHVFRQIVEIVNAAHSQ---GI 101 (793)
T ss_pred hhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhccc---ccccHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence 345 58888888772 234567788887 569999997532 2489999999999999999999998 99
Q ss_pred eecCCCCCceeeCCCCCccchhh
Q 013004 425 IHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 425 iHrDlK~~NILld~~~~~~i~df 447 (451)
+||||||+|||++..+..|++||
T Consensus 102 vHrDlKP~NiLl~~~~~~k~~d~ 124 (793)
T PLN00181 102 VVHNVRPSCFVMSSFNHVSFIES 124 (793)
T ss_pred eeccCCchhEEEcccCcEEEeec
Confidence 99999999999965444444433
No 439
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.12 E-value=4.3e-10 Score=103.46 Aligned_cols=138 Identities=17% Similarity=0.227 Sum_probs=102.5
Q ss_pred CccCccCCceEEEEEeCCCCEEEEEEcccccccccHHHHHHHHHHHhcCCC--CCccceeeEEecCC---eeeEEEecCC
Q 013004 305 NILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVH--RNLLRLYGFCTTVT---EKLLVYPYMT 379 (451)
Q Consensus 305 ~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H--~niv~l~~~~~~~~---~~~lv~ey~~ 379 (451)
+.++.|.++.||+++..+|+.+++|.............+..|+.++..+.+ .++.+++.+..... ..+++|||++
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~ 83 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD 83 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence 568999999999999876688999987543321123467899999998875 34566777665532 5689999999
Q ss_pred CCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCC---------------------------------------
Q 013004 380 NGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHC--------------------------------------- 420 (451)
Q Consensus 380 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~--------------------------------------- 420 (451)
+.++.+.+.. ..++..+...++.+++++|.+||+..
T Consensus 84 G~~l~~~~~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (223)
T cd05154 84 GRVLRDRLLR-----PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAME 158 (223)
T ss_pred CEecCCCCCC-----CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHH
Confidence 9888765532 12566777788888888888888521
Q ss_pred --------------CCCeeecCCCCCceeeCC--CCCccchhh
Q 013004 421 --------------DPKIIHRDVKAANILLDE--DADQSSKTI 447 (451)
Q Consensus 421 --------------~~~iiHrDlK~~NILld~--~~~~~i~df 447 (451)
...++|+|+.+.||+++. ++...+.||
T Consensus 159 ~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~ 201 (223)
T cd05154 159 RLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDW 201 (223)
T ss_pred HHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEec
Confidence 245799999999999998 555677776
No 440
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.10 E-value=1.4e-11 Score=130.10 Aligned_cols=139 Identities=25% Similarity=0.253 Sum_probs=112.5
Q ss_pred CCCCCCccCccCCceEEEEEeCCCCEEEEEEcccccccccHHHH---HHHHHHHhcCCCCCccceeeEEecCCeeeEEEe
Q 013004 300 GFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQF---QTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 376 (451)
Q Consensus 300 ~f~~~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~---~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 376 (451)
++...+.+|+++|=+|.+|+.+.|. |.||++-+.........| .+|+. ...++|||.+++..+-...+..|||-+
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvRq 101 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVRQ 101 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHHH
Confidence 4666788999999999999998776 889988443322222233 34444 567789999998877777777889999
Q ss_pred cCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhhh
Q 013004 377 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 448 (451)
Q Consensus 377 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df~ 448 (451)
|..+ +|++.+..+ +.+...+.+-|+.|++.|+.-+|.. +|+|+|||.+|||+++-..+.++||.
T Consensus 102 yvkh-nLyDRlSTR----PFL~~iEKkWiaFQLL~al~qcH~~---gVcHGDIKsENILiTSWNW~~LtDFA 165 (1431)
T KOG1240|consen 102 YVKH-NLYDRLSTR----PFLVLIEKKWIAFQLLKALSQCHKL---GVCHGDIKSENILITSWNWLYLTDFA 165 (1431)
T ss_pred HHhh-hhhhhhccc----hHHHHHHHHHHHHHHHHHHHHHHHc---CccccccccceEEEeeechhhhhccc
Confidence 9865 888888654 3477788889999999999999999 99999999999999999999999995
No 441
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.10 E-value=2.9e-12 Score=126.72 Aligned_cols=147 Identities=29% Similarity=0.412 Sum_probs=124.8
Q ss_pred eEEEeehhHHHhhhhcchhhhhhhhhhhhhccCCCcceEEEe----------ecCCccccccCCccccCCCCCCEEeCcC
Q 013004 35 FTLLVTLKAVLQECEQLHLLISFLIFIRVLQSSSNLFVYLIS----------DLGNAALSGELAPELGQLKNLELLELYG 104 (451)
Q Consensus 35 ~~~~~~l~~~~~~~~~l~~~~~~~~~~~~l~~~~n~~~~~~~----------~l~~n~~~g~~p~~l~~l~~L~~L~ls~ 104 (451)
|.++..+-...+.+.-+|..+..+..|.+++++.|++..++. -++||.++ .+|++++.+..|..||.+.
T Consensus 97 f~~Le~liLy~n~~r~ip~~i~~L~~lt~l~ls~NqlS~lp~~lC~lpLkvli~sNNkl~-~lp~~ig~~~tl~~ld~s~ 175 (722)
T KOG0532|consen 97 FVSLESLILYHNCIRTIPEAICNLEALTFLDLSSNQLSHLPDGLCDLPLKVLIVSNNKLT-SLPEEIGLLPTLAHLDVSK 175 (722)
T ss_pred HHHHHHHHHHhccceecchhhhhhhHHHHhhhccchhhcCChhhhcCcceeEEEecCccc-cCCcccccchhHHHhhhhh
Confidence 444555556666777777888888889999999998876543 45577765 6899999999999999999
Q ss_pred CccCccCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeeccccccCCCChhhhhcCCCCCeeccCCccccCcCC
Q 013004 105 NNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVP 184 (451)
Q Consensus 105 N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p 184 (451)
|.+. .+|+.++++.+|+.|++..|++. .+|+++..|+ |..||+|.|+++ .+|-.|.+++.|++|-|.+|.+..++.
T Consensus 176 nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~Lp-Li~lDfScNkis-~iPv~fr~m~~Lq~l~LenNPLqSPPA 251 (722)
T KOG0532|consen 176 NEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCSLP-LIRLDFSCNKIS-YLPVDFRKMRHLQVLQLENNPLQSPPA 251 (722)
T ss_pred hhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhCCc-eeeeecccCcee-ecchhhhhhhhheeeeeccCCCCCChH
Confidence 9998 89999999999999999999998 8888888765 899999999998 689999999999999999999998766
Q ss_pred CC
Q 013004 185 DN 186 (451)
Q Consensus 185 ~~ 186 (451)
+.
T Consensus 252 qI 253 (722)
T KOG0532|consen 252 QI 253 (722)
T ss_pred HH
Confidence 54
No 442
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.09 E-value=1.6e-11 Score=127.74 Aligned_cols=168 Identities=31% Similarity=0.355 Sum_probs=127.9
Q ss_pred eccceEEEeehhHHHhhhhcchhhhhh--hhhhhhhccCCCcceEE------------EeecCCccccccCCccccCCCC
Q 013004 31 CARGFTLLVTLKAVLQECEQLHLLISF--LIFIRVLQSSSNLFVYL------------ISDLGNAALSGELAPELGQLKN 96 (451)
Q Consensus 31 ~~~~~~~~~~l~~~~~~~~~l~~~~~~--~~~~~~l~~~~n~~~~~------------~~~l~~n~~~g~~p~~l~~l~~ 96 (451)
..++++++.+|..--+++..+|+..-. ...++.|+.+.|.+... .+++.+|.++...-|-+-+..+
T Consensus 305 ~le~~~sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~h 384 (1081)
T KOG0618|consen 305 FLEGLKSLRTLDLQSNNLPSLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKH 384 (1081)
T ss_pred cccccceeeeeeehhccccccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchhhhccccc
Confidence 345567777777666677777664211 12255566666655433 3456789999888889999999
Q ss_pred CCEEeCcCCccCccCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeeccccccCCCChhhhhcCCCCCeeccCC
Q 013004 97 LELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSN 176 (451)
Q Consensus 97 L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~ 176 (451)
|+.|+|++|++.......+.++..|+.|+||+|+++ .+|+.+.+++.|++|..-+|++. ..| .+..+++|+.+|+|.
T Consensus 385 LKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~l~qL~~lDlS~ 461 (1081)
T KOG0618|consen 385 LKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP-ELAQLPQLKVLDLSC 461 (1081)
T ss_pred eeeeeecccccccCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech-hhhhcCcceEEeccc
Confidence 999999999998544456788999999999999999 99999999999999999999997 578 889999999999999
Q ss_pred ccccC-cCCCCCCCCccccccccccc
Q 013004 177 NRLSG-PVPDNGSFSQFTPISFENNL 201 (451)
Q Consensus 177 N~l~~-~~p~~~~~~~~~~~~~~~n~ 201 (451)
|+++. .+|..-.-..++.+++.||.
T Consensus 462 N~L~~~~l~~~~p~p~LkyLdlSGN~ 487 (1081)
T KOG0618|consen 462 NNLSEVTLPEALPSPNLKYLDLSGNT 487 (1081)
T ss_pred chhhhhhhhhhCCCcccceeeccCCc
Confidence 99975 33332222456666777776
No 443
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.07 E-value=3.1e-11 Score=121.38 Aligned_cols=136 Identities=25% Similarity=0.268 Sum_probs=112.0
Q ss_pred ccCccCCceEEEEEe----CCCCEEEEEEccccccccc-HHHHHHHHHHHhcCC-CCCccceeeEEecCCeeeEEEecCC
Q 013004 306 ILGRGGFGKVYKGRL----ADGKLVAVKRLKEERTSGG-ELQFQTEVKIISMAV-HRNLLRLYGFCTTVTEKLLVYPYMT 379 (451)
Q Consensus 306 ~lG~G~fg~Vy~~~~----~~~~~vAvK~~~~~~~~~~-~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lv~ey~~ 379 (451)
++|+|+||+|+.++. ..|..+|+|.+++...... ......|..++...+ ||.+|++...++.+...+++++|..
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r 80 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR 80 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence 479999999998642 3477899998865432211 113456777788887 9999999999999999999999999
Q ss_pred CCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhhh
Q 013004 380 NGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 448 (451)
Q Consensus 380 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df~ 448 (451)
+|++...+.+... ++......+...+|-|++++|.. +|+|||+|++||++|.+|.+++.||=
T Consensus 81 gg~lft~l~~~~~----f~~~~~~~~~aelaLald~lh~l---~iiyrd~k~enilld~~Ghi~~tdfg 142 (612)
T KOG0603|consen 81 GGDLFTRLSKEVM----FDELDVAFYLAELALALDHLHKL---GIAYRDYKLENVLLLLEGHIKLTDFG 142 (612)
T ss_pred cchhhhccccCCc----hHHHHHHHHHHHHHHHHhhcchh---HHHHhcccccceeecccCccccCCch
Confidence 9999988876543 67777777888899999999999 99999999999999999999999883
No 444
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.06 E-value=6.3e-11 Score=123.95 Aligned_cols=139 Identities=22% Similarity=0.247 Sum_probs=105.6
Q ss_pred CCCCccCccCCceEEEEEeC-CCCEEEEEEccccc-ccccHH----HHHHHHHHHhcCCCCCccceeeEEecCCeeeEEE
Q 013004 302 SNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEER-TSGGEL----QFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 375 (451)
Q Consensus 302 ~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~-~~~~~~----~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (451)
...+++|.|++|.|+..... ..+..+.|..+... ...... .+..|..+-..+.|+|++..+..+.+.....-.|
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~m 400 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSM 400 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhh
Confidence 35678999999988777643 34444555432110 111111 2455666777889999988877777766666669
Q ss_pred ecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhhh
Q 013004 376 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 448 (451)
Q Consensus 376 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df~ 448 (451)
||+++ ||+..+.... .+.-.++..+..|+..|+.|+|+. +|.|||+|++|++++.++..||.||-
T Consensus 401 E~~~~-Dlf~~~~~~~----~~~~~e~~c~fKqL~~Gv~y~h~~---GiahrdlK~enll~~~~g~lki~Dfg 465 (601)
T KOG0590|consen 401 EYCPY-DLFSLVMSNG----KLTPLEADCFFKQLLRGVKYLHSM---GLAHRDLKLENLLVTENGILKIIDFG 465 (601)
T ss_pred hcccH-HHHHHHhccc----ccchhhhhHHHHHHHHHHHHHHhc---CceeccCccccEEEecCCceEEeecC
Confidence 99999 9999987642 267788889999999999999999 99999999999999999999999983
No 445
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.05 E-value=1.4e-10 Score=110.57 Aligned_cols=86 Identities=26% Similarity=0.338 Sum_probs=66.2
Q ss_pred CCCCCccceeeEEec---------------------------CCeeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHH
Q 013004 353 AVHRNLLRLYGFCTT---------------------------VTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKI 405 (451)
Q Consensus 353 l~H~niv~l~~~~~~---------------------------~~~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i 405 (451)
.+|||||++.++|.+ +..+|+||.-+.. +|.+++..+. .+...+..+
T Consensus 273 a~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~~~-----~s~r~~~~~ 346 (598)
T KOG4158|consen 273 AKHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWTRH-----RSYRTGRVI 346 (598)
T ss_pred CCCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhcCC-----CchHHHHHH
Confidence 469999999987643 2346888877754 8888887653 455566778
Q ss_pred HHHHHHHHHhHhcCCCCCeeecCCCCCceeeCC--CC--Cccchhh
Q 013004 406 ALGSARGLSYLHEHCDPKIIHRDVKAANILLDE--DA--DQSSKTI 447 (451)
Q Consensus 406 ~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~--~~--~~~i~df 447 (451)
..|+++|+.|||.+ +|.|||+|++|||+.- |. ...++||
T Consensus 347 laQlLEav~hL~~h---gvAhRDlKSDNiL~ElddD~~P~LVvaDF 389 (598)
T KOG4158|consen 347 LAQLLEAVTHLHKH---GVAHRDLKSDNILLELDDDEIPQLVVADF 389 (598)
T ss_pred HHHHHHHHHHHHHc---cchhhcccccceEEEecCCCCcEEEEccc
Confidence 89999999999999 9999999999999864 33 2355665
No 446
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.03 E-value=1.2e-09 Score=97.89 Aligned_cols=132 Identities=14% Similarity=0.154 Sum_probs=91.9
Q ss_pred CccCccCCceEEEEEeCC-------CCEEEEEEcccccc-----------c----------ccHHH----HHHHHHHHhc
Q 013004 305 NILGRGGFGKVYKGRLAD-------GKLVAVKRLKEERT-----------S----------GGELQ----FQTEVKIISM 352 (451)
Q Consensus 305 ~~lG~G~fg~Vy~~~~~~-------~~~vAvK~~~~~~~-----------~----------~~~~~----~~~E~~~l~~ 352 (451)
..||.|.=+.||.|...+ +..+|||+.+.... + ..... ..+|.+.|.+
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999997543 47899998753210 0 00111 2378888887
Q ss_pred CCC--CCccceeeEEecCCeeeEEEecCCCCChhH-HhhccCCCCCCCCHHHHHHHHHHHHHHHHhH-hcCCCCCeeecC
Q 013004 353 AVH--RNLLRLYGFCTTVTEKLLVYPYMTNGSVAS-RLRERQSSLPPLDWPTRKKIALGSARGLSYL-HEHCDPKIIHRD 428 (451)
Q Consensus 353 l~H--~niv~l~~~~~~~~~~~lv~ey~~~gsL~~-~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yL-H~~~~~~iiHrD 428 (451)
+.. -++.+.+.+ ...++||||+.+..+.. .+++. .++..+...+..+++.+|.++ |.. ++||+|
T Consensus 83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd~-----~~~~~~~~~i~~~i~~~l~~l~H~~---glVHGD 150 (197)
T cd05146 83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKDA-----KLNDEEMKNAYYQVLSMMKQLYKEC---NLVHAD 150 (197)
T ss_pred HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhcc-----ccCHHHHHHHHHHHHHHHHHHHHhC---CeecCC
Confidence 763 455555553 45789999998754422 22221 134455667788999999999 777 999999
Q ss_pred CCCCceeeCCCCCccchhhhh
Q 013004 429 VKAANILLDEDADQSSKTILR 449 (451)
Q Consensus 429 lK~~NILld~~~~~~i~df~~ 449 (451)
|++.|||+++ +.+.++||=+
T Consensus 151 Ls~~NIL~~~-~~v~iIDF~q 170 (197)
T cd05146 151 LSEYNMLWHD-GKVWFIDVSQ 170 (197)
T ss_pred CCHHHEEEEC-CcEEEEECCC
Confidence 9999999974 6788999844
No 447
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.00 E-value=3.4e-10 Score=120.40 Aligned_cols=60 Identities=28% Similarity=0.352 Sum_probs=32.0
Q ss_pred CCcEEeCCCCcCCccCcccccCCcccceeeccccccCCCChhhhhcCCCCCeeccCCccccCcCC
Q 013004 120 KLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVP 184 (451)
Q Consensus 120 ~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p 184 (451)
+|+.|++++|+|+ .+|..+ .+|+.|++++|+++ .+|..+..+++|+.|++++|+|+|.+|
T Consensus 403 ~L~~LdLS~N~Ls-sIP~l~---~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~ 462 (788)
T PRK15387 403 ELKELMVSGNRLT-SLPMLP---SGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTL 462 (788)
T ss_pred CCCEEEccCCcCC-CCCcch---hhhhhhhhccCccc-ccChHHhhccCCCeEECCCCCCCchHH
Confidence 3444455555544 344321 24455556666655 455556666666666666666665544
No 448
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=98.93 E-value=4.1e-09 Score=99.57 Aligned_cols=141 Identities=23% Similarity=0.348 Sum_probs=87.3
Q ss_pred CCCccCccCCceEEEEEeC-CCCEEEEEEccccc--ccccHHHHHHHHHHHhcCCC----------CCccceeeEE----
Q 013004 303 NKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEER--TSGGELQFQTEVKIISMAVH----------RNLLRLYGFC---- 365 (451)
Q Consensus 303 ~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~H----------~niv~l~~~~---- 365 (451)
..+.||.|+++.||.+++. +++.+|||.+.... ......++.+|.-....+.+ -.++--++..
T Consensus 16 ~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i~~ 95 (288)
T PF14531_consen 16 RGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRIPG 95 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEETT
T ss_pred EccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEEcC
Confidence 3478999999999999975 58999999874332 22233456666644444322 1111111211
Q ss_pred -----ecC--C------eeeEEEecCCCCChhHHhh---ccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCC
Q 013004 366 -----TTV--T------EKLLVYPYMTNGSVASRLR---ERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDV 429 (451)
Q Consensus 366 -----~~~--~------~~~lv~ey~~~gsL~~~l~---~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDl 429 (451)
... . ..+++|+-+ .+||.+.+. ........+....+..+..|+.+.+++||+. +++|+||
T Consensus 96 ~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~---GlVHgdi 171 (288)
T PF14531_consen 96 KPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSY---GLVHGDI 171 (288)
T ss_dssp S-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEEEST-
T ss_pred CCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhc---ceEeccc
Confidence 111 1 235677766 458877754 2222112234455667779999999999999 9999999
Q ss_pred CCCceeeCCCCCccchhh
Q 013004 430 KAANILLDEDADQSSKTI 447 (451)
Q Consensus 430 K~~NILld~~~~~~i~df 447 (451)
||+|++++.+|...++||
T Consensus 172 ~~~nfll~~~G~v~Lg~F 189 (288)
T PF14531_consen 172 KPENFLLDQDGGVFLGDF 189 (288)
T ss_dssp SGGGEEE-TTS-EEE--G
T ss_pred ceeeEEEcCCCCEEEcCh
Confidence 999999999999999998
No 449
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=98.91 E-value=1.7e-10 Score=114.38 Aligned_cols=164 Identities=26% Similarity=0.305 Sum_probs=136.5
Q ss_pred cceEEEeehhHHHhhhhcchhhhhhhhhhhhhccCCCcceE-----------EEeecCCccccccCCccccCCCCCCEEe
Q 013004 33 RGFTLLVTLKAVLQECEQLHLLISFLIFIRVLQSSSNLFVY-----------LISDLGNAALSGELAPELGQLKNLELLE 101 (451)
Q Consensus 33 ~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~l~~~~n~~~~-----------~~~~l~~n~~~g~~p~~l~~l~~L~~L~ 101 (451)
-+++-.+..+...+....+|.....+-+|..+.+.+|.+-. +.++|+.|.++ .+|..++.|+ |+.|.
T Consensus 72 ~~ltdt~~aDlsrNR~~elp~~~~~f~~Le~liLy~n~~r~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli 149 (722)
T KOG0532|consen 72 YDLTDTVFADLSRNRFSELPEEACAFVSLESLILYHNCIRTIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLI 149 (722)
T ss_pred ccccchhhhhccccccccCchHHHHHHHHHHHHHHhccceecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEE
Confidence 45666666777888888899888889999999988887654 34678888887 5888888776 68999
Q ss_pred CcCCccCccCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeeccccccCCCChhhhhcCCCCCeeccCCccccC
Q 013004 102 LYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSNNRLSG 181 (451)
Q Consensus 102 ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~ 181 (451)
+++|+++ .+|++++.+..|..||.|.|.+. .+|..++.+.+|+.|++..|++.. +|..+..| .|..||+|+|+++.
T Consensus 150 ~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~~-lp~El~~L-pLi~lDfScNkis~ 225 (722)
T KOG0532|consen 150 VSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLED-LPEELCSL-PLIRLDFSCNKISY 225 (722)
T ss_pred EecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhhh-CCHHHhCC-ceeeeecccCceee
Confidence 9999998 89999999999999999999998 889999999999999999999985 57777766 58999999999997
Q ss_pred cCCCCCCCCcccccccccccc
Q 013004 182 PVPDNGSFSQFTPISFENNLN 202 (451)
Q Consensus 182 ~~p~~~~~~~~~~~~~~~n~~ 202 (451)
.+-....+..+..+.+++|+.
T Consensus 226 iPv~fr~m~~Lq~l~LenNPL 246 (722)
T KOG0532|consen 226 LPVDFRKMRHLQVLQLENNPL 246 (722)
T ss_pred cchhhhhhhhheeeeeccCCC
Confidence 665556667777777888863
No 450
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=98.90 E-value=1.6e-09 Score=115.36 Aligned_cols=53 Identities=28% Similarity=0.384 Sum_probs=24.3
Q ss_pred ccceeeccccccCCCChhhhhcCCCCCeeccCCccccCcCCC-CCCCCccccccccccc
Q 013004 144 QLKYLRLNNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPD-NGSFSQFTPISFENNL 201 (451)
Q Consensus 144 ~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~-~~~~~~~~~~~~~~n~ 201 (451)
+|+.|++++|++++ +|.. +.+|+.|++++|+++. +|. ...+..+..+.+.+|+
T Consensus 403 ~L~~LdLS~N~Lss-IP~l---~~~L~~L~Ls~NqLt~-LP~sl~~L~~L~~LdLs~N~ 456 (788)
T PRK15387 403 ELKELMVSGNRLTS-LPML---PSGLLSLSVYRNQLTR-LPESLIHLSSETTVNLEGNP 456 (788)
T ss_pred CCCEEEccCCcCCC-CCcc---hhhhhhhhhccCcccc-cChHHhhccCCCeEECCCCC
Confidence 34444555555442 3332 1234455555555553 332 2334445555555654
No 451
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=98.89 E-value=1.6e-09 Score=95.10 Aligned_cols=89 Identities=36% Similarity=0.562 Sum_probs=37.4
Q ss_pred ccc-CCCCCCEEeCcCCccCccCCccccCCCCCcEEeCCCCcCCccCcccc-cCCcccceeeccccccCCCC-hhhhhcC
Q 013004 90 ELG-QLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTL-ANLKQLKYLRLNNNSLSGLI-PTSLTTI 166 (451)
Q Consensus 90 ~l~-~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~-~~l~~L~~L~ls~N~l~~~~-p~~~~~l 166 (451)
.++ .+.+|+.|+|++|.++ .++ .+..++.|+.|++++|+++ .+++.+ ..+++|+.|++++|++...- -..+..+
T Consensus 36 ~L~~~l~~L~~L~Ls~N~I~-~l~-~l~~L~~L~~L~L~~N~I~-~i~~~l~~~lp~L~~L~L~~N~I~~l~~l~~L~~l 112 (175)
T PF14580_consen 36 NLGATLDKLEVLDLSNNQIT-KLE-GLPGLPRLKTLDLSNNRIS-SISEGLDKNLPNLQELYLSNNKISDLNELEPLSSL 112 (175)
T ss_dssp S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS----S-CHHHHHH-TT--EEE-TTS---SCCCCGGGGG-
T ss_pred chhhhhcCCCEEECCCCCCc-ccc-CccChhhhhhcccCCCCCC-ccccchHHhCCcCCEEECcCCcCCChHHhHHHHcC
Confidence 444 4677888888888887 443 4777888888888888887 555444 35788888888888886421 1456677
Q ss_pred CCCCeeccCCccccC
Q 013004 167 TSLNILDLSNNRLSG 181 (451)
Q Consensus 167 ~~L~~l~ls~N~l~~ 181 (451)
++|+.|++.+|+++.
T Consensus 113 ~~L~~L~L~~NPv~~ 127 (175)
T PF14580_consen 113 PKLRVLSLEGNPVCE 127 (175)
T ss_dssp TT--EEE-TT-GGGG
T ss_pred CCcceeeccCCcccc
Confidence 888888888887763
No 452
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=98.85 E-value=5.5e-09 Score=118.47 Aligned_cols=164 Identities=19% Similarity=0.163 Sum_probs=107.4
Q ss_pred EEEeehhHHHhhhhcchhhhhhhhhhhhhccCCCcc-----------eEEEeecCCccccccCCccccCCCCCCEEeCcC
Q 013004 36 TLLVTLKAVLQECEQLHLLISFLIFIRVLQSSSNLF-----------VYLISDLGNAALSGELAPELGQLKNLELLELYG 104 (451)
Q Consensus 36 ~~~~~l~~~~~~~~~l~~~~~~~~~~~~l~~~~n~~-----------~~~~~~l~~n~~~g~~p~~l~~l~~L~~L~ls~ 104 (451)
.+|..|......+..++..+..+..|+.|+++++.. .+..++|++|.....+|..++++++|+.|++++
T Consensus 611 ~~L~~L~L~~s~l~~L~~~~~~l~~Lk~L~Ls~~~~l~~ip~ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~ 690 (1153)
T PLN03210 611 ENLVKLQMQGSKLEKLWDGVHSLTGLRNIDLRGSKNLKEIPDLSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSR 690 (1153)
T ss_pred cCCcEEECcCccccccccccccCCCCCEEECCCCCCcCcCCccccCCcccEEEecCCCCccccchhhhccCCCCEEeCCC
Confidence 344445444456666666667777888888876431 234556777766678888888888888888888
Q ss_pred CccCccCCccccCCCCCcEEeCCCCcCCc--------------------cCcccc-------------------------
Q 013004 105 NNLSGHIPSALGNLIKLKSLDLYSNLFNG--------------------TIPDTL------------------------- 139 (451)
Q Consensus 105 N~l~~~~p~~~~~l~~L~~L~ls~N~l~g--------------------~~p~~~------------------------- 139 (451)
|..-+.+|..+ ++++|+.|++++|...+ .+|..+
T Consensus 691 c~~L~~Lp~~i-~l~sL~~L~Lsgc~~L~~~p~~~~nL~~L~L~~n~i~~lP~~~~l~~L~~L~l~~~~~~~l~~~~~~l 769 (1153)
T PLN03210 691 CENLEILPTGI-NLKSLYRLNLSGCSRLKSFPDISTNISWLDLDETAIEEFPSNLRLENLDELILCEMKSEKLWERVQPL 769 (1153)
T ss_pred CCCcCccCCcC-CCCCCCEEeCCCCCCccccccccCCcCeeecCCCccccccccccccccccccccccchhhcccccccc
Confidence 65444677655 45566665555543222 333221
Q ss_pred -----cCCcccceeeccccccCCCChhhhhcCCCCCeeccCCccccCcCCCCCCCCcccccccccc
Q 013004 140 -----ANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPDNGSFSQFTPISFENN 200 (451)
Q Consensus 140 -----~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n 200 (451)
...++|+.|+|++|...+.+|..++++++|+.|++++|..-+.+|....+.++..+.+.++
T Consensus 770 ~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~~L~sL~~L~Ls~c 835 (1153)
T PLN03210 770 TPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGINLESLESLDLSGC 835 (1153)
T ss_pred chhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCCCccccCEEECCCC
Confidence 0123677788888877777888888999999999988765556776555666666655554
No 453
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.83 E-value=2e-09 Score=77.77 Aligned_cols=60 Identities=43% Similarity=0.661 Sum_probs=33.2
Q ss_pred CCCEEeCcCCccCccCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeecccccc
Q 013004 96 NLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSL 155 (451)
Q Consensus 96 ~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l 155 (451)
+|+.|++++|+++...+..|..+++|++|++++|+++...|..|..+++|++|++++|++
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 455566666665543334555555566666665555544444555555555555555543
No 454
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=98.82 E-value=3.9e-09 Score=112.83 Aligned_cols=131 Identities=30% Similarity=0.426 Sum_probs=77.1
Q ss_pred EeehhHHHhhhhcchhhhhhhhhhhhhccCCCcceE---------EEeecCCccccccCCccccCCCCCCEEeCcCCccC
Q 013004 38 LVTLKAVLQECEQLHLLISFLIFIRVLQSSSNLFVY---------LISDLGNAALSGELAPELGQLKNLELLELYGNNLS 108 (451)
Q Consensus 38 ~~~l~~~~~~~~~l~~~~~~~~~~~~l~~~~n~~~~---------~~~~l~~n~~~g~~p~~l~~l~~L~~L~ls~N~l~ 108 (451)
+..|....+.+..||..+. ..|+.|++++|.++. ..++|++|.+. .+|..+. ++|+.|++++|+++
T Consensus 201 L~~L~Ls~N~LtsLP~~l~--~nL~~L~Ls~N~LtsLP~~l~~~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~ 275 (754)
T PRK15370 201 ITTLILDNNELKSLPENLQ--GNIKTLYANSNQLTSIPATLPDTIQEMELSINRIT-ELPERLP--SALQSLDLFHNKIS 275 (754)
T ss_pred CcEEEecCCCCCcCChhhc--cCCCEEECCCCccccCChhhhccccEEECcCCccC-cCChhHh--CCCCEEECcCCccC
Confidence 4444445566667776543 467777777776653 23566777766 5676654 46777777777777
Q ss_pred ccCCccccCCCCCcEEeCCCCcCCccCcccccC-------------------CcccceeeccccccCCCChhhhhcCCCC
Q 013004 109 GHIPSALGNLIKLKSLDLYSNLFNGTIPDTLAN-------------------LKQLKYLRLNNNSLSGLIPTSLTTITSL 169 (451)
Q Consensus 109 ~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~-------------------l~~L~~L~ls~N~l~~~~p~~~~~l~~L 169 (451)
.+|..+. .+|+.|++++|+|+ .+|..+.. .++|+.|++++|.+++ +|..+. ++|
T Consensus 276 -~LP~~l~--~sL~~L~Ls~N~Lt-~LP~~lp~sL~~L~Ls~N~Lt~LP~~l~~sL~~L~Ls~N~Lt~-LP~~l~--~sL 348 (754)
T PRK15370 276 -CLPENLP--EELRYLSVYDNSIR-TLPAHLPSGITHLNVQSNSLTALPETLPPGLKTLEAGENALTS-LPASLP--PEL 348 (754)
T ss_pred -ccccccC--CCCcEEECCCCccc-cCcccchhhHHHHHhcCCccccCCccccccceeccccCCcccc-CChhhc--Ccc
Confidence 4666553 46777777777776 45543321 1344555555555543 343332 456
Q ss_pred CeeccCCcccc
Q 013004 170 NILDLSNNRLS 180 (451)
Q Consensus 170 ~~l~ls~N~l~ 180 (451)
+.|++++|+++
T Consensus 349 ~~L~Ls~N~L~ 359 (754)
T PRK15370 349 QVLDVSKNQIT 359 (754)
T ss_pred cEEECCCCCCC
Confidence 66666666665
No 455
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=98.81 E-value=2.5e-09 Score=114.38 Aligned_cols=150 Identities=23% Similarity=0.299 Sum_probs=95.7
Q ss_pred EEeehhHHHhhhhcchhhhhhhhhhhhhccCCCcceE---------EEeecCCccccccCCccccCCCCCCEEeCcCCcc
Q 013004 37 LLVTLKAVLQECEQLHLLISFLIFIRVLQSSSNLFVY---------LISDLGNAALSGELAPELGQLKNLELLELYGNNL 107 (451)
Q Consensus 37 ~~~~l~~~~~~~~~l~~~~~~~~~~~~l~~~~n~~~~---------~~~~l~~n~~~g~~p~~l~~l~~L~~L~ls~N~l 107 (451)
+|+.|....+.++.+|..+ ...|+.|++++|.+.. ..++|++|.++ .+|..+. .+|+.|++++|+|
T Consensus 221 nL~~L~Ls~N~LtsLP~~l--~~~L~~L~Ls~N~L~~LP~~l~s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~L 295 (754)
T PRK15370 221 NIKTLYANSNQLTSIPATL--PDTIQEMELSINRITELPERLPSALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSI 295 (754)
T ss_pred CCCEEECCCCccccCChhh--hccccEEECcCCccCcCChhHhCCCCEEECcCCccC-ccccccC--CCCcEEECCCCcc
Confidence 4444444445555555432 2356777777776543 23567777776 4666554 4677777777777
Q ss_pred CccCCcccc-------------------CCCCCcEEeCCCCcCCccCcccccCCcccceeeccccccCCCChhhhhcCCC
Q 013004 108 SGHIPSALG-------------------NLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITS 168 (451)
Q Consensus 108 ~~~~p~~~~-------------------~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~ 168 (451)
++ +|..+. -.++|+.|++++|.++ .+|..+. ++|+.|++++|+++ .+|..+. ++
T Consensus 296 t~-LP~~lp~sL~~L~Ls~N~Lt~LP~~l~~sL~~L~Ls~N~Lt-~LP~~l~--~sL~~L~Ls~N~L~-~LP~~lp--~~ 368 (754)
T PRK15370 296 RT-LPAHLPSGITHLNVQSNSLTALPETLPPGLKTLEAGENALT-SLPASLP--PELQVLDVSKNQIT-VLPETLP--PT 368 (754)
T ss_pred cc-CcccchhhHHHHHhcCCccccCCccccccceeccccCCccc-cCChhhc--CcccEEECCCCCCC-cCChhhc--CC
Confidence 63 343221 1246778888888887 4676553 68999999999998 5777663 68
Q ss_pred CCeeccCCccccCcCCCCCCCCcccccccccc
Q 013004 169 LNILDLSNNRLSGPVPDNGSFSQFTPISFENN 200 (451)
Q Consensus 169 L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n 200 (451)
|+.|++++|+++..++.. ...+..+.+.+|
T Consensus 369 L~~LdLs~N~Lt~LP~~l--~~sL~~LdLs~N 398 (754)
T PRK15370 369 ITTLDVSRNALTNLPENL--PAALQIMQASRN 398 (754)
T ss_pred cCEEECCCCcCCCCCHhH--HHHHHHHhhccC
Confidence 999999999999644332 123444455555
No 456
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.81 E-value=2e-09 Score=77.73 Aligned_cols=61 Identities=41% Similarity=0.633 Sum_probs=55.6
Q ss_pred CCCcEEeCCCCcCCccCcccccCCcccceeeccccccCCCChhhhhcCCCCCeeccCCccc
Q 013004 119 IKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSNNRL 179 (451)
Q Consensus 119 ~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l 179 (451)
++|+.|++++|+++...+..|..+++|++|++++|+++...|..|..+++|+.|++++|+|
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 4789999999999955557899999999999999999988778999999999999999985
No 457
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=98.78 E-value=3.2e-10 Score=118.22 Aligned_cols=159 Identities=27% Similarity=0.352 Sum_probs=106.1
Q ss_pred EeehhHHHhhhhcchhhhhhhhhhhhhccCCCcceEEEeec-----------CCccccccCCccccCCCCCCEEeCcCCc
Q 013004 38 LVTLKAVLQECEQLHLLISFLIFIRVLQSSSNLFVYLISDL-----------GNAALSGELAPELGQLKNLELLELYGNN 106 (451)
Q Consensus 38 ~~~l~~~~~~~~~l~~~~~~~~~~~~l~~~~n~~~~~~~~l-----------~~n~~~g~~p~~l~~l~~L~~L~ls~N~ 106 (451)
+..++.+.+..+.+|.+++.+.++..+..++|.++..+..+ ..|.+. .+|+.++.++.|++|+|..|+
T Consensus 243 l~~~dis~n~l~~lp~wi~~~~nle~l~~n~N~l~~lp~ri~~~~~L~~l~~~~nel~-yip~~le~~~sL~tLdL~~N~ 321 (1081)
T KOG0618|consen 243 LQYLDISHNNLSNLPEWIGACANLEALNANHNRLVALPLRISRITSLVSLSAAYNELE-YIPPFLEGLKSLRTLDLQSNN 321 (1081)
T ss_pred ceeeecchhhhhcchHHHHhcccceEecccchhHHhhHHHHhhhhhHHHHHhhhhhhh-hCCCcccccceeeeeeehhcc
Confidence 34455677777777877777788888888877776543322 244444 466666667777777777776
Q ss_pred cCc-------------------------------------------------cCCccccCCCCCcEEeCCCCcCCccCcc
Q 013004 107 LSG-------------------------------------------------HIPSALGNLIKLKSLDLYSNLFNGTIPD 137 (451)
Q Consensus 107 l~~-------------------------------------------------~~p~~~~~l~~L~~L~ls~N~l~g~~p~ 137 (451)
|.. ..=+.+.+...|+.|+|++|++. .+|+
T Consensus 322 L~~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~-~fpa 400 (1081)
T KOG0618|consen 322 LPSLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLN-SFPA 400 (1081)
T ss_pred ccccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccc-cCCH
Confidence 652 22222344567778888888776 6665
Q ss_pred c-ccCCcccceeeccccccCCCChhhhhcCCCCCeeccCCccccCcCCCCCCCCcccccccccc
Q 013004 138 T-LANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPDNGSFSQFTPISFENN 200 (451)
Q Consensus 138 ~-~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n 200 (451)
. +.+|..|+.|+||+|+|+ .+|..+.++..|++|...+|++... |...++..+..++++.|
T Consensus 401 s~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~~f-Pe~~~l~qL~~lDlS~N 462 (1081)
T KOG0618|consen 401 SKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLLSF-PELAQLPQLKVLDLSCN 462 (1081)
T ss_pred HHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCceeec-hhhhhcCcceEEecccc
Confidence 4 567777888888888887 5677788888888888888877753 46666666666666655
No 458
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.77 E-value=9e-08 Score=90.46 Aligned_cols=136 Identities=15% Similarity=0.104 Sum_probs=92.1
Q ss_pred ccCccCCceEEEEEeCCCCEEEEEEccccccc----------ccHHHHHHHHHHHhcCCCCCc--cceeeEEec-----C
Q 013004 306 ILGRGGFGKVYKGRLADGKLVAVKRLKEERTS----------GGELQFQTEVKIISMAVHRNL--LRLYGFCTT-----V 368 (451)
Q Consensus 306 ~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~----------~~~~~~~~E~~~l~~l~H~ni--v~l~~~~~~-----~ 368 (451)
.+-+.....|++.++ +|+.|.||+....... .....+.+|...+..+...+| ...+++... .
T Consensus 29 ~v~~~~~rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~ 107 (268)
T PRK15123 29 VFRELEGRRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPAT 107 (268)
T ss_pred EEecCCCceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCcc
Confidence 343333445667766 5778999976332210 111247788888877753333 344555543 2
Q ss_pred CeeeEEEecCCCC-ChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCC-------CC
Q 013004 369 TEKLLVYPYMTNG-SVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDE-------DA 440 (451)
Q Consensus 369 ~~~~lv~ey~~~g-sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~-------~~ 440 (451)
...++|+|++++- +|.+++..... ...+......++.+++..+.-||.. +|+|+|++++|||++. +.
T Consensus 108 ~~s~LVte~l~~~~sL~~~~~~~~~--~~~~~~~~~~ll~~la~~i~~LH~~---Gi~HgDL~~~NiLl~~~~~~~~~~~ 182 (268)
T PRK15123 108 RTSFIITEDLAPTISLEDYCADWAT--NPPDPRLKRMLIKRVATMVRDMHAA---GINHRDCYICHFLLHLPFPGREEDL 182 (268)
T ss_pred ceeEEEEeeCCCCccHHHHHHhhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---cCccCCCChhhEEEeccccCCCCCc
Confidence 3578999999986 78888864321 1244566778999999999999999 9999999999999985 34
Q ss_pred Cccchhh
Q 013004 441 DQSSKTI 447 (451)
Q Consensus 441 ~~~i~df 447 (451)
.+.++||
T Consensus 183 ~~~LIDl 189 (268)
T PRK15123 183 KLSVIDL 189 (268)
T ss_pred eEEEEEC
Confidence 5677775
No 459
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=98.76 E-value=1.9e-08 Score=114.16 Aligned_cols=121 Identities=23% Similarity=0.302 Sum_probs=89.8
Q ss_pred EeecCCccccccCCccccCCCCCCEEeCcCCccCccCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeeccccc
Q 013004 75 ISDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNS 154 (451)
Q Consensus 75 ~~~l~~n~~~g~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~ 154 (451)
.++|++|...+.+|.+++++++|+.|++++|..-+.+|..+ ++++|+.|++++|.....+|.. .++|+.|+|++|.
T Consensus 782 ~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~---~~nL~~L~Ls~n~ 857 (1153)
T PLN03210 782 RLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFPDI---STNISDLNLSRTG 857 (1153)
T ss_pred heeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCcccccccc---ccccCEeECCCCC
Confidence 45667777777788888888888888888875555777766 6888888888887655466653 3578889999999
Q ss_pred cCCCChhhhhcCCCCCeeccCC-ccccCcCCCCCCCCcccccccccc
Q 013004 155 LSGLIPTSLTTITSLNILDLSN-NRLSGPVPDNGSFSQFTPISFENN 200 (451)
Q Consensus 155 l~~~~p~~~~~l~~L~~l~ls~-N~l~~~~p~~~~~~~~~~~~~~~n 200 (451)
++ .+|..+..+++|+.|++++ |++.+.++....+..+....+.+.
T Consensus 858 i~-~iP~si~~l~~L~~L~L~~C~~L~~l~~~~~~L~~L~~L~l~~C 903 (1153)
T PLN03210 858 IE-EVPWWIEKFSNLSFLDMNGCNNLQRVSLNISKLKHLETVDFSDC 903 (1153)
T ss_pred Cc-cChHHHhcCCCCCEEECCCCCCcCccCcccccccCCCeeecCCC
Confidence 97 5788899999999999987 666665444455556655555443
No 460
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.68 E-value=1.6e-07 Score=81.76 Aligned_cols=127 Identities=18% Similarity=0.249 Sum_probs=90.7
Q ss_pred CccCccCCceEEEEEeCCCCEEEEEE-ccccccccc------HHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEec
Q 013004 305 NILGRGGFGKVYKGRLADGKLVAVKR-LKEERTSGG------ELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 377 (451)
Q Consensus 305 ~~lG~G~fg~Vy~~~~~~~~~vAvK~-~~~~~~~~~------~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey 377 (451)
..+++|+=+.+|.+.+. |..+.+|. +++..-... ...-.+|++++..++--.|-.-.=+..+++...++|||
T Consensus 2 ~~i~~GAEa~i~~~~~~-g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~ 80 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL-GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEY 80 (204)
T ss_pred chhhCCcceeEEeeecc-CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEE
Confidence 45789999999999874 34466664 333221111 12456799999888755554444456677888999999
Q ss_pred CCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 378 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 378 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
++|..|.+.+... ...++..+-.-+.-||.. +|+|+||.++||++..+. +.+.||
T Consensus 81 I~G~~lkd~l~~~-----------~~~~~r~vG~~vg~lH~~---givHGDLTtsNiIl~~~~-i~~IDf 135 (204)
T COG3642 81 IEGELLKDALEEA-----------RPDLLREVGRLVGKLHKA---GIVHGDLTTSNIILSGGR-IYFIDF 135 (204)
T ss_pred eCChhHHHHHHhc-----------chHHHHHHHHHHHHHHhc---CeecCCCccceEEEeCCc-EEEEEC
Confidence 9998888888654 134555666667789999 999999999999999875 666665
No 461
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=98.68 E-value=1.2e-08 Score=89.57 Aligned_cols=107 Identities=36% Similarity=0.460 Sum_probs=35.4
Q ss_pred cccCCCCCCEEeCcCCccCccCCcccc-CCCCCcEEeCCCCcCCccCcccccCCcccceeeccccccCCCChhhh-hcCC
Q 013004 90 ELGQLKNLELLELYGNNLSGHIPSALG-NLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSL-TTIT 167 (451)
Q Consensus 90 ~l~~l~~L~~L~ls~N~l~~~~p~~~~-~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~-~~l~ 167 (451)
.+.+...++.|+|.+|.|+ .|. .++ .+.+|+.||||+|.++ .++ .+..++.|+.|++++|.++. ++..+ ..++
T Consensus 14 ~~~n~~~~~~L~L~~n~I~-~Ie-~L~~~l~~L~~L~Ls~N~I~-~l~-~l~~L~~L~~L~L~~N~I~~-i~~~l~~~lp 88 (175)
T PF14580_consen 14 QYNNPVKLRELNLRGNQIS-TIE-NLGATLDKLEVLDLSNNQIT-KLE-GLPGLPRLKTLDLSNNRISS-ISEGLDKNLP 88 (175)
T ss_dssp ------------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS---S--CHHHHHH-T
T ss_pred ccccccccccccccccccc-ccc-chhhhhcCCCEEECCCCCCc-ccc-CccChhhhhhcccCCCCCCc-cccchHHhCC
Confidence 3456667899999999998 453 566 5889999999999998 565 48889999999999999985 44444 4689
Q ss_pred CCCeeccCCccccCcC--CCCCCCCccccccccccc
Q 013004 168 SLNILDLSNNRLSGPV--PDNGSFSQFTPISFENNL 201 (451)
Q Consensus 168 ~L~~l~ls~N~l~~~~--p~~~~~~~~~~~~~~~n~ 201 (451)
+|+.|++++|++...- -....+..+..++..+|+
T Consensus 89 ~L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NP 124 (175)
T PF14580_consen 89 NLQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNP 124 (175)
T ss_dssp T--EEE-TTS---SCCCCGGGGG-TT--EEE-TT-G
T ss_pred cCCEEECcCCcCCChHHhHHHHcCCCcceeeccCCc
Confidence 9999999999997521 111234445555555554
No 462
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=98.68 E-value=4.4e-09 Score=96.96 Aligned_cols=120 Identities=25% Similarity=0.334 Sum_probs=85.0
Q ss_pred eecCCccccccCCccccCCCCCCEEeCcCCccCccCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeecccccc
Q 013004 76 SDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSL 155 (451)
Q Consensus 76 ~~l~~n~~~g~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l 155 (451)
+||+.|.++ .+.++..-++.++.|++|+|.+. .+.. +..+.+|+.||||+|.++ .+-.+-..|.+.+.|.|+.|.+
T Consensus 289 lDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~-~v~n-La~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL~La~N~i 364 (490)
T KOG1259|consen 289 LDLSGNLIT-QIDESVKLAPKLRRLILSQNRIR-TVQN-LAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTLKLAQNKI 364 (490)
T ss_pred ccccccchh-hhhhhhhhccceeEEecccccee-eehh-hhhcccceEeecccchhH-hhhhhHhhhcCEeeeehhhhhH
Confidence 455555554 46777777788888888888887 4443 778888888888888887 6666666778888888888888
Q ss_pred CCCChhhhhcCCCCCeeccCCccccC--cCCCCCCCCccccccccccc
Q 013004 156 SGLIPTSLTTITSLNILDLSNNRLSG--PVPDNGSFSQFTPISFENNL 201 (451)
Q Consensus 156 ~~~~p~~~~~l~~L~~l~ls~N~l~~--~~p~~~~~~~~~~~~~~~n~ 201 (451)
.. -+.++.+-+|..||+++|++.. .+-..|.+..+..+.+.+|+
T Consensus 365 E~--LSGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NP 410 (490)
T KOG1259|consen 365 ET--LSGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNP 410 (490)
T ss_pred hh--hhhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCC
Confidence 64 2567788888888888888763 23334445555555555553
No 463
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.66 E-value=2.3e-07 Score=80.48 Aligned_cols=138 Identities=14% Similarity=0.211 Sum_probs=95.2
Q ss_pred CCCccCccCCceEEEEEeCCCCEEEEEE-cccccccc------cHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEE
Q 013004 303 NKNILGRGGFGKVYKGRLADGKLVAVKR-LKEERTSG------GELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 375 (451)
Q Consensus 303 ~~~~lG~G~fg~Vy~~~~~~~~~vAvK~-~~~~~~~~------~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (451)
...++-+|+-+.|+++.+. |+.+.||. +.+..-.. ...+..+|++.+.+++--.|.--.=++.+...-.++|
T Consensus 11 ~l~likQGAEArv~~~~~~-Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M 89 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFS-GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM 89 (229)
T ss_pred cceeeeccceeeEeeeccC-CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence 4577889999999999984 66666664 33222111 1224678999888776545443333455666678999
Q ss_pred ecCCC-CChhHHhhccCCCCCCCCHHHH-HHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCc---cchhh
Q 013004 376 PYMTN-GSVASRLRERQSSLPPLDWPTR-KKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQ---SSKTI 447 (451)
Q Consensus 376 ey~~~-gsL~~~l~~~~~~~~~l~~~~~-~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~---~i~df 447 (451)
||+++ .++.+++...... -..... ...+..|-+.+.-||.. +|||+||..+||++.+++.. .+.||
T Consensus 90 E~~~g~~~vk~~i~~~~~~---~~~d~~~~~~~~~iG~~igklH~n---diiHGDLTTSNill~~~~~~~~~~lIdf 160 (229)
T KOG3087|consen 90 EFIDGASTVKDFILSTMED---ESEDEGLAELARRIGELIGKLHDN---DIIHGDLTTSNILLRSDGNQITPILIDF 160 (229)
T ss_pred EeccchhHHHHHHHHHccC---cccchhHHHHHHHHHHHHHHhhhC---CeecccccccceEEecCCCcCceEEEee
Confidence 99977 4677777765332 122223 56778888899999999 99999999999999988644 45554
No 464
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=98.64 E-value=2.5e-09 Score=98.58 Aligned_cols=103 Identities=29% Similarity=0.374 Sum_probs=79.8
Q ss_pred eecCCccccccCCccccCCCCCCEEeCcCCccCccCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeecccccc
Q 013004 76 SDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSL 155 (451)
Q Consensus 76 ~~l~~n~~~g~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l 155 (451)
++++.|.+.. + ..+..|++|+.||||+|.++ .+-..-..+-+.+.|.|+.|.+. .+ ..++.|-+|..||+++|++
T Consensus 312 L~lS~N~i~~-v-~nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL~La~N~iE-~L-SGL~KLYSLvnLDl~~N~I 386 (490)
T KOG1259|consen 312 LILSQNRIRT-V-QNLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTLKLAQNKIE-TL-SGLRKLYSLVNLDLSSNQI 386 (490)
T ss_pred Eeccccceee-e-hhhhhcccceEeecccchhH-hhhhhHhhhcCEeeeehhhhhHh-hh-hhhHhhhhheeccccccch
Confidence 4445555432 2 23678999999999999998 55555566788999999999986 33 4578888999999999999
Q ss_pred CCC-ChhhhhcCCCCCeeccCCccccCcC
Q 013004 156 SGL-IPTSLTTITSLNILDLSNNRLSGPV 183 (451)
Q Consensus 156 ~~~-~p~~~~~l~~L~~l~ls~N~l~~~~ 183 (451)
... --..+++++.|+.+.+.+|++++.+
T Consensus 387 e~ldeV~~IG~LPCLE~l~L~~NPl~~~v 415 (490)
T KOG1259|consen 387 EELDEVNHIGNLPCLETLRLTGNPLAGSV 415 (490)
T ss_pred hhHHHhcccccccHHHHHhhcCCCccccc
Confidence 732 1257899999999999999998754
No 465
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.63 E-value=1.9e-07 Score=83.38 Aligned_cols=122 Identities=21% Similarity=0.269 Sum_probs=77.0
Q ss_pred eEEEEEeCCCCEEEEEEcccccc-------------c--------cc----HHHHHHHHHHHhcCCCC--CccceeeEEe
Q 013004 314 KVYKGRLADGKLVAVKRLKEERT-------------S--------GG----ELQFQTEVKIISMAVHR--NLLRLYGFCT 366 (451)
Q Consensus 314 ~Vy~~~~~~~~~vAvK~~~~~~~-------------~--------~~----~~~~~~E~~~l~~l~H~--niv~l~~~~~ 366 (451)
.||.|...+|..+|||+.+.... . .. .....+|.+.|..+... ++.+.+.+.
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 38999998999999998754210 0 00 11357899999999865 455555442
Q ss_pred cCCeeeEEEecCC--CCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHh-HhcCCCCCeeecCCCCCceeeCCCCCcc
Q 013004 367 TVTEKLLVYPYMT--NGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSY-LHEHCDPKIIHRDVKAANILLDEDADQS 443 (451)
Q Consensus 367 ~~~~~~lv~ey~~--~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~y-LH~~~~~~iiHrDlK~~NILld~~~~~~ 443 (451)
...+||||++ |..+.. +.... ++......+..+++..+.. +|.. +|+|+||.+.||+++++ .+.
T Consensus 80 ---~~~ivME~I~~~G~~~~~-l~~~~-----~~~~~~~~~~~~il~~~~~~~~~~---givHGDLs~~NIlv~~~-~~~ 146 (188)
T PF01163_consen 80 ---RNVIVMEYIGEDGVPLPR-LKDVD-----LSPEEPKELLEEILEEIIKMLHKA---GIVHGDLSEYNILVDDG-KVY 146 (188)
T ss_dssp ---TTEEEEE--EETTEEGGC-HHHCG-----GGGSTHHHHHHHHHHHHHHHHHCT---TEEESS-STTSEEEETT-CEE
T ss_pred ---CCEEEEEecCCCccchhh-HHhcc-----ccchhHHHHHHHHHHHHHHHHHhc---CceecCCChhhEEeecc-eEE
Confidence 3579999998 544433 33321 1123455667777776666 4677 99999999999999988 899
Q ss_pred chhhhh
Q 013004 444 SKTILR 449 (451)
Q Consensus 444 i~df~~ 449 (451)
++||=+
T Consensus 147 iIDf~q 152 (188)
T PF01163_consen 147 IIDFGQ 152 (188)
T ss_dssp E--GTT
T ss_pred EEecCc
Confidence 999843
No 466
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=98.62 E-value=1.1e-08 Score=99.73 Aligned_cols=108 Identities=31% Similarity=0.391 Sum_probs=64.3
Q ss_pred EEeecCCccccccCCccccCCCC---CCEEeCcCCccCc----cCCccccCC-CCCcEEeCCCCcCCcc----CcccccC
Q 013004 74 LISDLGNAALSGELAPELGQLKN---LELLELYGNNLSG----HIPSALGNL-IKLKSLDLYSNLFNGT----IPDTLAN 141 (451)
Q Consensus 74 ~~~~l~~n~~~g~~p~~l~~l~~---L~~L~ls~N~l~~----~~p~~~~~l-~~L~~L~ls~N~l~g~----~p~~~~~ 141 (451)
..++|++|.+.+..+..+..+.+ |+.|++++|++++ .+...+..+ ++|+.|++++|.+++. ++..+..
T Consensus 84 ~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~ 163 (319)
T cd00116 84 QELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKALRA 163 (319)
T ss_pred eEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHHHh
Confidence 34445555555444555544444 7777777777762 333445555 6777777777777632 2334555
Q ss_pred CcccceeeccccccCCC----ChhhhhcCCCCCeeccCCccccC
Q 013004 142 LKQLKYLRLNNNSLSGL----IPTSLTTITSLNILDLSNNRLSG 181 (451)
Q Consensus 142 l~~L~~L~ls~N~l~~~----~p~~~~~l~~L~~l~ls~N~l~~ 181 (451)
+++|+.|++++|.+++. ++..+..+++|+.|++++|.+++
T Consensus 164 ~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~ 207 (319)
T cd00116 164 NRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTD 207 (319)
T ss_pred CCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccCh
Confidence 56677777777777632 33344555677777777777653
No 467
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=98.60 E-value=5.8e-08 Score=97.70 Aligned_cols=92 Identities=24% Similarity=0.356 Sum_probs=83.6
Q ss_pred HhcCCCCCccceeeEEecCCeeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCe-eecC
Q 013004 350 ISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKI-IHRD 428 (451)
Q Consensus 350 l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~i-iHrD 428 (451)
|+.+.|.|+.+++|.+..+...+.|.+|+..|+|.+.+..... .++|.-...+..+++.||+|+|.- +| .|+.
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~---~~d~~F~~s~~rdi~~Gl~ylh~s---~i~~hg~ 74 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDI---KLDYFFILSFIRDISKGLAYLHNS---PIGYHGA 74 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhcccc---CccHHHHHHHHHHHHHHHHHHhcC---cceeeee
Confidence 3567899999999999999999999999999999999987432 389999999999999999999986 55 9999
Q ss_pred CCCCceeeCCCCCccchhh
Q 013004 429 VKAANILLDEDADQSSKTI 447 (451)
Q Consensus 429 lK~~NILld~~~~~~i~df 447 (451)
++++|+++|.....|+.||
T Consensus 75 l~s~nClvd~~w~lklt~~ 93 (484)
T KOG1023|consen 75 LKSSNCLVDSRWVLKLTDF 93 (484)
T ss_pred eccccceeeeeEEEEechh
Confidence 9999999999999999997
No 468
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=98.54 E-value=3.1e-08 Score=99.76 Aligned_cols=129 Identities=35% Similarity=0.442 Sum_probs=66.8
Q ss_pred eEEEeehhHHHhhhhcchhhhhhhh-hhhhhccCCCcceEEEeecCCccccccCCccccCCCCCCEEeCcCCccCccCCc
Q 013004 35 FTLLVTLKAVLQECEQLHLLISFLI-FIRVLQSSSNLFVYLISDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPS 113 (451)
Q Consensus 35 ~~~~~~l~~~~~~~~~l~~~~~~~~-~~~~l~~~~n~~~~~~~~l~~n~~~g~~p~~l~~l~~L~~L~ls~N~l~~~~p~ 113 (451)
++.+..|......+.++++.++.+. .++.|+++.|.+.. +|..++.+++|+.|++++|+++ .+|.
T Consensus 115 ~~~l~~L~l~~n~i~~i~~~~~~~~~nL~~L~l~~N~i~~-------------l~~~~~~l~~L~~L~l~~N~l~-~l~~ 180 (394)
T COG4886 115 LTNLTSLDLDNNNITDIPPLIGLLKSNLKELDLSDNKIES-------------LPSPLRNLPNLKNLDLSFNDLS-DLPK 180 (394)
T ss_pred ccceeEEecCCcccccCccccccchhhcccccccccchhh-------------hhhhhhccccccccccCCchhh-hhhh
Confidence 3455666666667777777777774 77777777776653 3334445555555555555554 4444
Q ss_pred cccCCCCCcEEeCCCCcCCccCcccccCCcccceeeccccccCCCChhhhhcCCCCCeeccCCccc
Q 013004 114 ALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSNNRL 179 (451)
Q Consensus 114 ~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l 179 (451)
..+.++.|+.|++++|++. .+|...+.+..|+.|++++|++. ..+..+..+.++..+.+++|++
T Consensus 181 ~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~ 244 (394)
T COG4886 181 LLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKL 244 (394)
T ss_pred hhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCcee
Confidence 4444455555555555554 44443333334444444444322 2233344444444444444443
No 469
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=98.54 E-value=5.6e-08 Score=98.00 Aligned_cols=145 Identities=19% Similarity=0.198 Sum_probs=111.9
Q ss_pred HhcCCCCCCccCccCCceEEEEEe--CCCCEEEEEEccccccccc-HHHHHHHHHHHhcCC-CCCccceeeEEecCCeee
Q 013004 297 ATDGFSNKNILGRGGFGKVYKGRL--ADGKLVAVKRLKEERTSGG-ELQFQTEVKIISMAV-HRNLLRLYGFCTTVTEKL 372 (451)
Q Consensus 297 ~~~~f~~~~~lG~G~fg~Vy~~~~--~~~~~vAvK~~~~~~~~~~-~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~ 372 (451)
-+.+|..+..||.|.|+.|+.... .++..+++|.+........ ...-..|+-+...+. |.++++.+..|...+..|
T Consensus 263 ~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ 342 (524)
T KOG0601|consen 263 KLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGY 342 (524)
T ss_pred ecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCcccccccc
Confidence 356788899999999999999864 3578899998865443222 222345555555554 999999988888888899
Q ss_pred EEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCC-CCccchhhh
Q 013004 373 LVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDED-ADQSSKTIL 448 (451)
Q Consensus 373 lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~-~~~~i~df~ 448 (451)
+--||+++++......-.. .++....+++..|++.|+.++|+. .++|+|+||+||++..+ +..++.||.
T Consensus 343 ip~e~~~~~s~~l~~~~~~----~~d~~~~~~~~~q~~~~l~~i~s~---~~~~~d~~psni~i~~~~~~~~~~~~~ 412 (524)
T KOG0601|consen 343 IPLEFCEGGSSSLRSVTSQ----MLDEDPRLRLTAQILTALNVIHSK---LFVHLDVKPSNILISNDGFFSKLGDFG 412 (524)
T ss_pred CchhhhcCcchhhhhHHHH----hcCcchhhhhHHHHHhccccccch---hhhcccccccceeeccchhhhhccccc
Confidence 9999999998776553221 266777888999999999999988 99999999999999987 566666654
No 470
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=98.50 E-value=3.9e-08 Score=99.01 Aligned_cols=124 Identities=34% Similarity=0.530 Sum_probs=94.0
Q ss_pred EEeecCCccccccCCccccCCC-CCCEEeCcCCccCccCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeeccc
Q 013004 74 LISDLGNAALSGELAPELGQLK-NLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNN 152 (451)
Q Consensus 74 ~~~~l~~n~~~g~~p~~l~~l~-~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~ 152 (451)
..+++.+|.++ .+|+..+.+. +|+.|++++|.+. .+|..+..+++|+.|++++|+++ .+|...+.++.|+.|++++
T Consensus 119 ~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L~~L~ls~ 195 (394)
T COG4886 119 TSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNLDLSG 195 (394)
T ss_pred eEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCchhh-hhhhhhhhhhhhhheeccC
Confidence 44455555555 5888888885 9999999999998 77778999999999999999998 7887776889999999999
Q ss_pred cccCCCChhhhhcCCCCCeeccCCccccCcCCCCCCCCccccccccccc
Q 013004 153 NSLSGLIPTSLTTITSLNILDLSNNRLSGPVPDNGSFSQFTPISFENNL 201 (451)
Q Consensus 153 N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~ 201 (451)
|+++ .+|..+..+..|+.+++++|++...+.....+..+......+|.
T Consensus 196 N~i~-~l~~~~~~~~~L~~l~~~~N~~~~~~~~~~~~~~l~~l~l~~n~ 243 (394)
T COG4886 196 NKIS-DLPPEIELLSALEELDLSNNSIIELLSSLSNLKNLSGLELSNNK 243 (394)
T ss_pred Cccc-cCchhhhhhhhhhhhhhcCCcceecchhhhhcccccccccCCce
Confidence 9998 56777667777999999999644334333344444444444443
No 471
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=98.48 E-value=4.2e-08 Score=95.56 Aligned_cols=144 Identities=27% Similarity=0.285 Sum_probs=98.1
Q ss_pred EEeehhHHHhhhh-cchhhhhhhhh---hhhhccCCCcce-----------------EEEeecCCcccccc----CCccc
Q 013004 37 LLVTLKAVLQECE-QLHLLISFLIF---IRVLQSSSNLFV-----------------YLISDLGNAALSGE----LAPEL 91 (451)
Q Consensus 37 ~~~~l~~~~~~~~-~l~~~~~~~~~---~~~l~~~~n~~~-----------------~~~~~l~~n~~~g~----~p~~l 91 (451)
.+..|...-+.+. ..+..+..+.. ++.|+++.|.+. +..+++++|.+++. ++..+
T Consensus 82 ~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~ 161 (319)
T cd00116 82 GLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKAL 161 (319)
T ss_pred ceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHH
Confidence 5555543333222 23333444444 777777766543 35678888888742 34456
Q ss_pred cCCCCCCEEeCcCCccCc----cCCccccCCCCCcEEeCCCCcCCcc----CcccccCCcccceeeccccccCCCChhhh
Q 013004 92 GQLKNLELLELYGNNLSG----HIPSALGNLIKLKSLDLYSNLFNGT----IPDTLANLKQLKYLRLNNNSLSGLIPTSL 163 (451)
Q Consensus 92 ~~l~~L~~L~ls~N~l~~----~~p~~~~~l~~L~~L~ls~N~l~g~----~p~~~~~l~~L~~L~ls~N~l~~~~p~~~ 163 (451)
..+.+|+.|++++|.+++ .++..+..++.|+.|++++|.+++. ++..+..+++|+.|++++|.+++..+..+
T Consensus 162 ~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l 241 (319)
T cd00116 162 RANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAAAL 241 (319)
T ss_pred HhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHHHH
Confidence 777899999999999984 2445566678999999999998743 34456678889999999999986433333
Q ss_pred hc-----CCCCCeeccCCcccc
Q 013004 164 TT-----ITSLNILDLSNNRLS 180 (451)
Q Consensus 164 ~~-----l~~L~~l~ls~N~l~ 180 (451)
.. ...|+.|++++|.++
T Consensus 242 ~~~~~~~~~~L~~L~l~~n~i~ 263 (319)
T cd00116 242 ASALLSPNISLLTLSLSCNDIT 263 (319)
T ss_pred HHHHhccCCCceEEEccCCCCC
Confidence 32 368999999999987
No 472
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=98.47 E-value=4.8e-08 Score=102.44 Aligned_cols=143 Identities=22% Similarity=0.295 Sum_probs=110.1
Q ss_pred CCCCCCccCccCCceEEEEEeC--CCCEEEEEEccccc-ccccHHHHHHHHHHHhcCC-CCCccceeeEEecCCeeeEEE
Q 013004 300 GFSNKNILGRGGFGKVYKGRLA--DGKLVAVKRLKEER-TSGGELQFQTEVKIISMAV-HRNLLRLYGFCTTVTEKLLVY 375 (451)
Q Consensus 300 ~f~~~~~lG~G~fg~Vy~~~~~--~~~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lv~ 375 (451)
.|...+.||+|+|+.|-..... ....+|+|.+.... ..........|..+-..+. |+|++++++...+....++.+
T Consensus 21 ~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~~ 100 (601)
T KOG0590|consen 21 QYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLSL 100 (601)
T ss_pred cccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCccccccc
Confidence 4556677999999999887642 34567777764432 1111122334666666666 999999999999999999999
Q ss_pred ecCCCCChhHHhh-ccCCCCCCCCHHHHHHHHHHHHHHHHhHh-cCCCCCeeecCCCCCceeeCCCC-Cccchhhh
Q 013004 376 PYMTNGSVASRLR-ERQSSLPPLDWPTRKKIALGSARGLSYLH-EHCDPKIIHRDVKAANILLDEDA-DQSSKTIL 448 (451)
Q Consensus 376 ey~~~gsL~~~l~-~~~~~~~~l~~~~~~~i~~~ia~~L~yLH-~~~~~~iiHrDlK~~NILld~~~-~~~i~df~ 448 (451)
||..+|++.+.+. ... ...+...+..+..|+..++.|+| .. ++.|||+||+|.+++..+ ..+++||.
T Consensus 101 ~~s~g~~~f~~i~~~~~---~~~~~~~~~~~~~ql~s~l~~~H~~~---~~~h~~ikP~n~~l~~s~~~l~~~df~ 170 (601)
T KOG0590|consen 101 SYSDGGSLFSKISHPDS---TGTSSSSASRYLPQLNSGLSYLHPEN---GVTHRDIKPSNSLLDESGSALKIADFG 170 (601)
T ss_pred CcccccccccccccCCc---cCCCCcchhhhhhhhccCccccCccc---ccccCCCCCccchhccCCCcccCCCch
Confidence 9999999998883 322 12455667788999999999999 76 899999999999999999 89999984
No 473
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.44 E-value=1.2e-07 Score=88.90 Aligned_cols=95 Identities=25% Similarity=0.383 Sum_probs=81.4
Q ss_pred HhcCCCCCccceeeEEecC-----CeeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCe
Q 013004 350 ISMAVHRNLLRLYGFCTTV-----TEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKI 424 (451)
Q Consensus 350 l~~l~H~niv~l~~~~~~~-----~~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~i 424 (451)
+-.+.|.|||+++.|+.+. ....++.|||+.|++.++|++.......+......+++-||..||.|||+. .|+|
T Consensus 121 llqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~-~Ppi 199 (458)
T KOG1266|consen 121 LLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSC-DPPI 199 (458)
T ss_pred HHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhcc-CCcc
Confidence 4455699999999998654 347899999999999999998765555677777789999999999999994 9999
Q ss_pred eecCCCCCceeeCCCCCccch
Q 013004 425 IHRDVKAANILLDEDADQSSK 445 (451)
Q Consensus 425 iHrDlK~~NILld~~~~~~i~ 445 (451)
+|+++..+-|++..++-+|+.
T Consensus 200 ihgnlTc~tifiq~ngLIkig 220 (458)
T KOG1266|consen 200 IHGNLTCDTIFIQHNGLIKIG 220 (458)
T ss_pred ccCCcchhheeecCCceEEec
Confidence 999999999999999888775
No 474
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=98.44 E-value=7.3e-07 Score=91.14 Aligned_cols=116 Identities=19% Similarity=0.200 Sum_probs=91.9
Q ss_pred eCCCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEecCCCCChhHHhhccCCCCCCCCH
Q 013004 320 LADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDW 399 (451)
Q Consensus 320 ~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~ 399 (451)
..++.+|.|...+.... .......+.+..++.++||||++++..+.+.+..|+|+|-+. -|..++.+. .-
T Consensus 34 k~~~~~vsVF~~~~~~~-~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~l-------~~ 103 (690)
T KOG1243|consen 34 KADGGPVSVFVYKRSNG-EVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKEL-------GK 103 (690)
T ss_pred eccCCceEEEEEeCCCc-hhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHHh-------HH
Confidence 45688888887754332 222346677889999999999999999999999999999876 355566543 23
Q ss_pred HHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 400 PTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 400 ~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
......+.||+.||.|||+.| +++|+++--+.|+++..|+-|++.|
T Consensus 104 ~~v~~Gl~qIl~AL~FL~~d~--~lvHgNv~~~SVfVn~~GeWkLggl 149 (690)
T KOG1243|consen 104 EEVCLGLFQILAALSFLNDDC--NLVHGNVCKDSVFVNESGEWKLGGL 149 (690)
T ss_pred HHHHHHHHHHHHHHHHHhccC--CeeeccEeeeeEEEcCCCcEEEeee
Confidence 445567889999999999765 8999999999999999999888765
No 475
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=98.44 E-value=3.3e-08 Score=94.46 Aligned_cols=136 Identities=24% Similarity=0.317 Sum_probs=104.7
Q ss_pred EEeecCCccccccCCccccCCCCCCEEeCcCCccCccCCccccCCCCCcEEeCCC-CcCCccCcccccCCcccceeeccc
Q 013004 74 LISDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYS-NLFNGTIPDTLANLKQLKYLRLNN 152 (451)
Q Consensus 74 ~~~~l~~n~~~g~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~-N~l~g~~p~~~~~l~~L~~L~ls~ 152 (451)
..++|..|.++---|..|+.+.+|+.||||+|+|+..-|..|.++.+|..|-+.+ |+|+....+.|++|.+|+.|.+.-
T Consensus 70 veirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLllNa 149 (498)
T KOG4237|consen 70 VEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLLLNA 149 (498)
T ss_pred eEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHhcCh
Confidence 4567788888754445688899999999999999988899999999988775554 999855556799999999999999
Q ss_pred cccCCCChhhhhcCCCCCeeccCCccccCcCC-CCCCCCcccccccccccccCCCCCC
Q 013004 153 NSLSGLIPTSLTTITSLNILDLSNNRLSGPVP-DNGSFSQFTPISFENNLNLCGPNTK 209 (451)
Q Consensus 153 N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p-~~~~~~~~~~~~~~~n~~lCg~~~~ 209 (451)
|++.-...+.|..+++|..|.+-.|.+....- ....+...+.+..+.|+..|--..+
T Consensus 150 n~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~ 207 (498)
T KOG4237|consen 150 NHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLP 207 (498)
T ss_pred hhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccccccc
Confidence 99987777899999999999999998864322 1222344556667778777654443
No 476
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=98.41 E-value=1.4e-07 Score=90.25 Aligned_cols=90 Identities=27% Similarity=0.345 Sum_probs=65.7
Q ss_pred ccCCCCCCEEeCcCCccCccCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeeccccccCCCChhhhhcCCCCC
Q 013004 91 LGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLN 170 (451)
Q Consensus 91 l~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~ 170 (451)
|..|++|+.|+|++|++++.-+..|..+..+++|.|..|++.-.--..|.++..|+.|+|.+|+++...|.+|..+.+|.
T Consensus 270 f~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~ 349 (498)
T KOG4237|consen 270 FKKLPNLRKLNLSNNKITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLS 349 (498)
T ss_pred HhhcccceEeccCCCccchhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceee
Confidence 45667777777777777776677777777777777777777633344567777777777777777777777777777777
Q ss_pred eeccCCcccc
Q 013004 171 ILDLSNNRLS 180 (451)
Q Consensus 171 ~l~ls~N~l~ 180 (451)
.|++-.|.+.
T Consensus 350 ~l~l~~Np~~ 359 (498)
T KOG4237|consen 350 TLNLLSNPFN 359 (498)
T ss_pred eeehccCccc
Confidence 7777777663
No 477
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.41 E-value=1.5e-06 Score=79.24 Aligned_cols=99 Identities=18% Similarity=0.212 Sum_probs=75.6
Q ss_pred HHHHHHHHHhcCCC--CCccceeeEEecC----CeeeEEEecCCCC-ChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHH
Q 013004 342 QFQTEVKIISMAVH--RNLLRLYGFCTTV----TEKLLVYPYMTNG-SVASRLRERQSSLPPLDWPTRKKIALGSARGLS 414 (451)
Q Consensus 342 ~~~~E~~~l~~l~H--~niv~l~~~~~~~----~~~~lv~ey~~~g-sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~ 414 (451)
...+|...+..+.. -.+.+.+++.... ...++|+|++++. +|.+++..... .+......++.+++..+.
T Consensus 57 ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~----~~~~~~~~ll~~l~~~i~ 132 (206)
T PF06293_consen 57 RAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQ----LDPSQRRELLRALARLIA 132 (206)
T ss_pred HHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcc----cchhhHHHHHHHHHHHHH
Confidence 57778877766653 3345556665542 2458999999984 78888876322 445667789999999999
Q ss_pred hHhcCCCCCeeecCCCCCceeeCCCC---Cccchhh
Q 013004 415 YLHEHCDPKIIHRDVKAANILLDEDA---DQSSKTI 447 (451)
Q Consensus 415 yLH~~~~~~iiHrDlK~~NILld~~~---~~~i~df 447 (451)
-||.. +|+|+|+++.|||++.+. ...++||
T Consensus 133 ~lH~~---gi~H~Dl~~~NILv~~~~~~~~~~lIDl 165 (206)
T PF06293_consen 133 KLHDA---GIYHGDLNPSNILVDPDDGQYRFYLIDL 165 (206)
T ss_pred HHHHC---cCCCCCCCcccEEEeCCCCceeEEEEcc
Confidence 99999 999999999999999987 6677775
No 478
>PRK09902 hypothetical protein; Provisional
Probab=98.38 E-value=5.7e-06 Score=74.50 Aligned_cols=134 Identities=19% Similarity=0.182 Sum_probs=95.7
Q ss_pred cCccCCceEEEEEeCCCCEEEEEEccccc--c---cccHHHHHHHHHHHhcCCCCC--ccceeeEEe-c----CCeeeEE
Q 013004 307 LGRGGFGKVYKGRLADGKLVAVKRLKEER--T---SGGELQFQTEVKIISMAVHRN--LLRLYGFCT-T----VTEKLLV 374 (451)
Q Consensus 307 lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~--~---~~~~~~~~~E~~~l~~l~H~n--iv~l~~~~~-~----~~~~~lv 374 (451)
-|+|+-+.|++-.+. |+.+=+|+-.... + +-+...|.+|...+..+...+ +.+.. ++. . .-..++|
T Consensus 26 ~~rgG~SgV~r~~~~-g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LV 103 (216)
T PRK09902 26 YRRNGMSGVQCVERN-GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLV 103 (216)
T ss_pred cCCCCcceEEEEEeC-CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEE
Confidence 367888889987774 4467788764211 1 234568999999998886433 44444 332 1 1236899
Q ss_pred EecCCC-CChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCC--ccchhh
Q 013004 375 YPYMTN-GSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDAD--QSSKTI 447 (451)
Q Consensus 375 ~ey~~~-gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~--~~i~df 447 (451)
+|-+.+ -||.+++.+... .+.+...+..+..+++..+.-||+. ++.|+|+.+.||+++.++. ++++||
T Consensus 104 Te~L~g~~~L~~~l~~~~~--~~~~~~~k~~il~~va~~ia~LH~~---Gv~Hgdly~khIll~~~g~~~v~lIDl 174 (216)
T PRK09902 104 TEDMAGFISIADWYAQHAV--SPYSDEVRQAMLKAVALAFKKMHSV---NRQHGCCYVRHIYVKTEGKAEAGFLDL 174 (216)
T ss_pred EEeCCCCccHHHHHhcCCc--CCcchHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHhheeecCCCCeeEEEEEh
Confidence 997764 488888865422 2346667788999999999999999 9999999999999997665 777776
No 479
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.37 E-value=1.5e-06 Score=80.18 Aligned_cols=131 Identities=21% Similarity=0.198 Sum_probs=88.6
Q ss_pred CCCccCccCCceEEEEEeCCCCEEEEEEccccccc-------------------c--cHHHHHHHHHHHhcCCCC--Ccc
Q 013004 303 NKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTS-------------------G--GELQFQTEVKIISMAVHR--NLL 359 (451)
Q Consensus 303 ~~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~-------------------~--~~~~~~~E~~~l~~l~H~--niv 359 (451)
..+.||.|.=+.||.|..+.|.++|||.=+...+. . ......+|.+.|.++... .|.
T Consensus 95 iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~VP 174 (304)
T COG0478 95 IGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVKVP 174 (304)
T ss_pred hccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCCCC
Confidence 35789999999999999999999999964322110 0 012357788888888644 555
Q ss_pred ceeeEEecCCeeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCC
Q 013004 360 RLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDED 439 (451)
Q Consensus 360 ~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~ 439 (451)
+.+++ +...+||||+++--|...- ++-.....+...|++-+.-.-.. ++||+|+.+-||++++|
T Consensus 175 ~P~~~----nRHaVvMe~ieG~eL~~~r---------~~~en~~~il~~il~~~~~~~~~---GiVHGDlSefNIlV~~d 238 (304)
T COG0478 175 KPIAW----NRHAVVMEYIEGVELYRLR---------LDVENPDEILDKILEEVRKAYRR---GIVHGDLSEFNILVTED 238 (304)
T ss_pred Ccccc----ccceeeeehcccceeeccc---------CcccCHHHHHHHHHHHHHHHHHc---CccccCCchheEEEecC
Confidence 55443 4468999999985553221 11122233344444433333344 89999999999999999
Q ss_pred CCccchhhhh
Q 013004 440 ADQSSKTILR 449 (451)
Q Consensus 440 ~~~~i~df~~ 449 (451)
|.+.+.||=|
T Consensus 239 g~~~vIDwPQ 248 (304)
T COG0478 239 GDIVVIDWPQ 248 (304)
T ss_pred CCEEEEeCcc
Confidence 9999999865
No 480
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.23 E-value=3e-08 Score=101.23 Aligned_cols=128 Identities=33% Similarity=0.357 Sum_probs=64.8
Q ss_pred hhhhccCCCcceEEEeecCCccccccCCccccCCCCCCEEeCcCCccCccCCccccCCCCCcEEeCCCCcCCccCccccc
Q 013004 61 IRVLQSSSNLFVYLISDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLA 140 (451)
Q Consensus 61 ~~~l~~~~n~~~~~~~~l~~n~~~g~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~ 140 (451)
|.+.+.+.|.++. +..++.-++.|+.|||++|+++. .. .+..|+.|+.|||+.|++. .+|..=.
T Consensus 166 L~~a~fsyN~L~~-------------mD~SLqll~ale~LnLshNk~~~-v~-~Lr~l~~LkhLDlsyN~L~-~vp~l~~ 229 (1096)
T KOG1859|consen 166 LATASFSYNRLVL-------------MDESLQLLPALESLNLSHNKFTK-VD-NLRRLPKLKHLDLSYNCLR-HVPQLSM 229 (1096)
T ss_pred HhhhhcchhhHHh-------------HHHHHHHHHHhhhhccchhhhhh-hH-HHHhcccccccccccchhc-cccccch
Confidence 4455555665553 34444455556666666666652 22 4555666666666666665 4443211
Q ss_pred CCcccceeeccccccCCCChhhhhcCCCCCeeccCCccccCcC--CCCCCCCcccccccccccccCCC
Q 013004 141 NLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSNNRLSGPV--PDNGSFSQFTPISFENNLNLCGP 206 (451)
Q Consensus 141 ~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~--p~~~~~~~~~~~~~~~n~~lCg~ 206 (451)
.-..|+.|++++|-++.. ..+.++.+|+.||+++|-+++-- -....+..+..+.++||+..|.+
T Consensus 230 ~gc~L~~L~lrnN~l~tL--~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~c~p 295 (1096)
T KOG1859|consen 230 VGCKLQLLNLRNNALTTL--RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLCCAP 295 (1096)
T ss_pred hhhhheeeeecccHHHhh--hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccccCH
Confidence 112266666666666532 33555666666666666555421 11122333444455556555543
No 481
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.23 E-value=6.3e-06 Score=82.02 Aligned_cols=128 Identities=16% Similarity=0.114 Sum_probs=96.0
Q ss_pred ceEEEEE-eCCCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEec----CCeeeEEEecCCC-CChhHH
Q 013004 313 GKVYKGR-LADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTT----VTEKLLVYPYMTN-GSVASR 386 (451)
Q Consensus 313 g~Vy~~~-~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~----~~~~~lv~ey~~~-gsL~~~ 386 (451)
.+.|++. ..||..|..|+++..+.... .....-++.++++.|.|||++.+++.+ ...+.+||+|+++ ++|.++
T Consensus 290 ~Ttyk~~s~~DG~~YvLkRlhg~r~~~~-nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~ 368 (655)
T KOG3741|consen 290 ITTYKATSNVDGNAYVLKRLHGDRDQST-NKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDL 368 (655)
T ss_pred ceeEeeeeccCCceeeeeeeccccccCc-ccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHH
Confidence 4578887 45799999999954432211 122344677899999999999998874 3467999999986 577776
Q ss_pred hhccCCC-----------CCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccc
Q 013004 387 LRERQSS-----------LPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSS 444 (451)
Q Consensus 387 l~~~~~~-----------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i 444 (451)
....... ....++...+.++.|+..||.++|+. |..-+-|.+.+||++.+..++|
T Consensus 369 ~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHss---GLAck~L~~~kIlv~G~~RIri 434 (655)
T KOG3741|consen 369 YFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSS---GLACKTLDLKKILVTGKMRIRI 434 (655)
T ss_pred HccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhc---CceeecccHhHeEeeCcceEEE
Confidence 6532211 12356778889999999999999999 8888999999999999865544
No 482
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=98.17 E-value=1.6e-06 Score=92.53 Aligned_cols=105 Identities=24% Similarity=0.377 Sum_probs=74.1
Q ss_pred hcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEe
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 376 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 376 (451)
.++|..++.|..|+||.||..+++ +.+.+|+|+-+... ..+- ++.....|.+|
T Consensus 82 e~df~~IklisngAygavylvrh~~trqrfa~kiNkq~l-------ilRn--ilt~a~npfvv----------------- 135 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKINKQNL-------ILRN--ILTFAGNPFVV----------------- 135 (1205)
T ss_pred ccccceeEeeccCCCCceeeeeccccccchhhcccccch-------hhhc--cccccCCccee-----------------
Confidence 467888999999999999999875 46788885332211 1111 33334445444
Q ss_pred cCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 377 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 377 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
||-...+..... ++. +++.+++|+|+- +|+|||+||+|.++..-|.+|+.||
T Consensus 136 ----gDc~tllk~~g~----lPv--------dmvla~Eylh~y---givhrdlkpdnllIT~mGhiKlTDf 187 (1205)
T KOG0606|consen 136 ----GDCATLLKNIGP----LPV--------DMVLAVEYLHSY---GIVHRDLKPDNLLITSMGHIKLTDF 187 (1205)
T ss_pred ----chhhhhcccCCC----Ccc--------hhhHHhHhhccC---CeecCCCCCCcceeeecccccccch
Confidence 555555544322 221 227899999998 9999999999999999999999998
No 483
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.16 E-value=4e-08 Score=80.71 Aligned_cols=88 Identities=24% Similarity=0.373 Sum_probs=69.2
Q ss_pred cccCCCCCCEEeCcCCccCccCCccccC-CCCCcEEeCCCCcCCccCcccccCCcccceeeccccccCCCChhhhhcCCC
Q 013004 90 ELGQLKNLELLELYGNNLSGHIPSALGN-LIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITS 168 (451)
Q Consensus 90 ~l~~l~~L~~L~ls~N~l~~~~p~~~~~-l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~ 168 (451)
.+.....|+..+|++|.+. ..|+.|.. ++.++.|+|++|.++ .+|+++..|+.|+.|+++.|.+. ..|.-+..+.+
T Consensus 48 ~l~~~~el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lNl~~N~l~-~~p~vi~~L~~ 124 (177)
T KOG4579|consen 48 MLSKGYELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLNLRFNPLN-AEPRVIAPLIK 124 (177)
T ss_pred HHhCCceEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhcccccCccc-cchHHHHHHHh
Confidence 3445566777889999888 55665644 457888999999998 88888999999999999999997 45787777888
Q ss_pred CCeeccCCcccc
Q 013004 169 LNILDLSNNRLS 180 (451)
Q Consensus 169 L~~l~ls~N~l~ 180 (451)
|-.||..+|.+.
T Consensus 125 l~~Lds~~na~~ 136 (177)
T KOG4579|consen 125 LDMLDSPENARA 136 (177)
T ss_pred HHHhcCCCCccc
Confidence 888888877665
No 484
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.14 E-value=1.8e-07 Score=76.97 Aligned_cols=110 Identities=22% Similarity=0.278 Sum_probs=81.2
Q ss_pred eEEEeecCCccccccCCccccCC-CCCCEEeCcCCccCccCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeec
Q 013004 72 VYLISDLGNAALSGELAPELGQL-KNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRL 150 (451)
Q Consensus 72 ~~~~~~l~~n~~~g~~p~~l~~l-~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l 150 (451)
.+.-.+|++|.|- ..|+.+... +.++.|+|++|.++ .+|.++..++.|+.|+++.|.|. ..|..+..|.+|.+||.
T Consensus 54 el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lNl~~N~l~-~~p~vi~~L~~l~~Lds 130 (177)
T KOG4579|consen 54 ELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLNLRFNPLN-AEPRVIAPLIKLDMLDS 130 (177)
T ss_pred eEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhcccccCccc-cchHHHHHHHhHHHhcC
Confidence 3345667777765 467776554 47888999999998 78999999999999999999997 77888888889999998
Q ss_pred cccccCCCChhhhhcCCCCCeeccCCccccCcCCC
Q 013004 151 NNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPD 185 (451)
Q Consensus 151 s~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~ 185 (451)
.+|... ++|-.+-.-+..-..++.++.+.+.-|.
T Consensus 131 ~~na~~-eid~dl~~s~~~al~~lgnepl~~~~~~ 164 (177)
T KOG4579|consen 131 PENARA-EIDVDLFYSSLPALIKLGNEPLGDETKK 164 (177)
T ss_pred CCCccc-cCcHHHhccccHHHHHhcCCcccccCcc
Confidence 888886 6676533333334455666666665554
No 485
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=98.13 E-value=5.5e-07 Score=87.34 Aligned_cols=138 Identities=23% Similarity=0.171 Sum_probs=65.0
Q ss_pred eccceEEEeehhHHHhhhhcch---hhhhhhhhhhhhccCCCcceEEEeecCCccccccCCccccCCCCCCEEeCcCCcc
Q 013004 31 CARGFTLLVTLKAVLQECEQLH---LLISFLIFIRVLQSSSNLFVYLISDLGNAALSGELAPELGQLKNLELLELYGNNL 107 (451)
Q Consensus 31 ~~~~~~~~~~l~~~~~~~~~l~---~~~~~~~~~~~l~~~~n~~~~~~~~l~~n~~~g~~p~~l~~l~~L~~L~ls~N~l 107 (451)
-.+.+..+..|+.+.+-+.... ..+..++.|+.|+++.|.+..... +..+ ..+++|+.|.|+.+.|
T Consensus 141 ~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~----s~~~-------~~l~~lK~L~l~~CGl 209 (505)
T KOG3207|consen 141 YSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFIS----SNTT-------LLLSHLKQLVLNSCGL 209 (505)
T ss_pred hhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCcc----ccch-------hhhhhhheEEeccCCC
Confidence 3556677777776666333333 335668889999999998764211 0111 1344455555555555
Q ss_pred Cc-cCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeeccccccCCCCh--hhhhcCCCCCeeccCCcccc
Q 013004 108 SG-HIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIP--TSLTTITSLNILDLSNNRLS 180 (451)
Q Consensus 108 ~~-~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p--~~~~~l~~L~~l~ls~N~l~ 180 (451)
+- .+-..+-.+++|+.|+|..|...+.--.....++.|+.|||++|++.. .+ ...+.++.|+.|+++.+.++
T Consensus 210 s~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~-~~~~~~~~~l~~L~~Lnls~tgi~ 284 (505)
T KOG3207|consen 210 SWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLID-FDQGYKVGTLPGLNQLNLSSTGIA 284 (505)
T ss_pred CHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccc-cccccccccccchhhhhccccCcc
Confidence 41 111222334444555555443111111122234444555555544432 22 23344444444444444443
No 486
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.10 E-value=1e-05 Score=82.92 Aligned_cols=139 Identities=19% Similarity=0.226 Sum_probs=87.2
Q ss_pred cCCCCCCccCccCCceEEEEEeCCCCEEEEEEccccccc---------------------c------------------c
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTS---------------------G------------------G 339 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~---------------------~------------------~ 339 (451)
++|+. +.|+.++-|+||+|++++|+.||||+.++...+ . .
T Consensus 126 ~eF~~-~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ 204 (517)
T COG0661 126 SEFEP-EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLRE 204 (517)
T ss_pred HHcCC-CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHH
Confidence 33443 679999999999999999999999988653210 0 0
Q ss_pred HHHHHHHHHHHhcC----CCCCccceeeEEe-cCCeeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHH-H
Q 013004 340 ELQFQTEVKIISMA----VHRNLLRLYGFCT-TVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARG-L 413 (451)
Q Consensus 340 ~~~~~~E~~~l~~l----~H~niv~l~~~~~-~~~~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~-L 413 (451)
+.++.+|+..+.++ ++..=+++-.++. -.....++|||++|-.+.+........ .+ +..++..++++ +
T Consensus 205 ElDy~~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~g---~d---~k~ia~~~~~~f~ 278 (517)
T COG0661 205 ELDYRREAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSAG---ID---RKELAELLVRAFL 278 (517)
T ss_pred HhCHHHHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHhcC---CC---HHHHHHHHHHHHH
Confidence 01244566555443 2222233333333 356789999999998887774322111 33 23333333322 2
Q ss_pred HhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 414 SYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 414 ~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
.-+-.. +++|.|..|.||+++.++..-..||
T Consensus 279 ~q~~~d---gffHaDpHpGNi~v~~~g~i~~lDf 309 (517)
T COG0661 279 RQLLRD---GFFHADPHPGNILVRSDGRIVLLDF 309 (517)
T ss_pred HHHHhc---CccccCCCccceEEecCCcEEEEcC
Confidence 222223 8999999999999999988777665
No 487
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=98.03 E-value=3.6e-06 Score=55.99 Aligned_cols=36 Identities=39% Similarity=0.625 Sum_probs=16.6
Q ss_pred CCCEEeCcCCccCccCCccccCCCCCcEEeCCCCcCC
Q 013004 96 NLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFN 132 (451)
Q Consensus 96 ~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~ 132 (451)
+|++|++++|+++ .+|+.+++|++|+.|++++|+++
T Consensus 2 ~L~~L~l~~N~i~-~l~~~l~~l~~L~~L~l~~N~i~ 37 (44)
T PF12799_consen 2 NLEELDLSNNQIT-DLPPELSNLPNLETLNLSNNPIS 37 (44)
T ss_dssp T-SEEEETSSS-S-SHGGHGTTCTTSSEEEETSSCCS
T ss_pred cceEEEccCCCCc-ccCchHhCCCCCCEEEecCCCCC
Confidence 3445555555554 34444455555555555555444
No 488
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.03 E-value=6.5e-05 Score=69.44 Aligned_cols=73 Identities=12% Similarity=0.105 Sum_probs=51.3
Q ss_pred CCccCccCCceEEEEEeCCCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCC--ccceeeEEecCCeeeEEEecCCCC
Q 013004 304 KNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRN--LLRLYGFCTTVTEKLLVYPYMTNG 381 (451)
Q Consensus 304 ~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~n--iv~l~~~~~~~~~~~lv~ey~~~g 381 (451)
...||+|..+.||+. .+..+++|...... ......+|.+.+..+..-. +.+.+++....+...++||+++|.
T Consensus 6 ~~~i~~G~t~~~y~~---~~~~~VlR~~~~~~---~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~ 79 (226)
T TIGR02172 6 WTQTGEGGNGESYTH---KTGKWMLKLYNPGF---DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGK 79 (226)
T ss_pred heeecCCCCcceeEe---cCCCEEEEeCCCCC---CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCc
Confidence 367899999999984 24456788775432 2234678888887776433 456677776677778999999986
Q ss_pred C
Q 013004 382 S 382 (451)
Q Consensus 382 s 382 (451)
+
T Consensus 80 ~ 80 (226)
T TIGR02172 80 R 80 (226)
T ss_pred c
Confidence 3
No 489
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.01 E-value=3.8e-07 Score=93.45 Aligned_cols=116 Identities=30% Similarity=0.330 Sum_probs=86.7
Q ss_pred hhhcchhhhhhhhhhhhhccCCCcceEEEeecCCccccccCCccccCCCCCCEEeCcCCccCccCCcc-ccCCCCCcEEe
Q 013004 47 ECEQLHLLISFLIFIRVLQSSSNLFVYLISDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSA-LGNLIKLKSLD 125 (451)
Q Consensus 47 ~~~~l~~~~~~~~~~~~l~~~~n~~~~~~~~l~~n~~~g~~p~~l~~l~~L~~L~ls~N~l~~~~p~~-~~~l~~L~~L~ 125 (451)
.+..+-..+-.++-++.|++++|.++- . ..+..|..|++|||++|++. .+|.- ...|. |+.|+
T Consensus 175 ~L~~mD~SLqll~ale~LnLshNk~~~-------------v-~~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc~-L~~L~ 238 (1096)
T KOG1859|consen 175 RLVLMDESLQLLPALESLNLSHNKFTK-------------V-DNLRRLPKLKHLDLSYNCLR-HVPQLSMVGCK-LQLLN 238 (1096)
T ss_pred hHHhHHHHHHHHHHhhhhccchhhhhh-------------h-HHHHhcccccccccccchhc-cccccchhhhh-heeee
Confidence 334444445566778888888887662 1 25678999999999999998 55542 33444 99999
Q ss_pred CCCCcCCccCcccccCCcccceeeccccccCCCCh-hhhhcCCCCCeeccCCcccc
Q 013004 126 LYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIP-TSLTTITSLNILDLSNNRLS 180 (451)
Q Consensus 126 ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p-~~~~~l~~L~~l~ls~N~l~ 180 (451)
+++|.++ .+- .+.+|++|+.||+|+|-+.+--- .-++.+.+|..|.|.+|++.
T Consensus 239 lrnN~l~-tL~-gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 239 LRNNALT-TLR-GIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred ecccHHH-hhh-hHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 9999998 443 47899999999999999986311 23566778999999999985
No 490
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=97.98 E-value=4.3e-06 Score=55.62 Aligned_cols=36 Identities=42% Similarity=0.646 Sum_probs=22.0
Q ss_pred CCcEEeCCCCcCCccCcccccCCcccceeeccccccC
Q 013004 120 KLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLS 156 (451)
Q Consensus 120 ~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~ 156 (451)
+|++|++++|+++ .+|+.+++|++|+.|++++|+++
T Consensus 2 ~L~~L~l~~N~i~-~l~~~l~~l~~L~~L~l~~N~i~ 37 (44)
T PF12799_consen 2 NLEELDLSNNQIT-DLPPELSNLPNLETLNLSNNPIS 37 (44)
T ss_dssp T-SEEEETSSS-S-SHGGHGTTCTTSSEEEETSSCCS
T ss_pred cceEEEccCCCCc-ccCchHhCCCCCCEEEecCCCCC
Confidence 5666666666666 55555666666666666666665
No 491
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=97.94 E-value=9.6e-06 Score=82.09 Aligned_cols=140 Identities=21% Similarity=0.115 Sum_probs=105.0
Q ss_pred CCCCCccCc--cCCceEEEEEe---CCCCEEEEEEcccccc-cccHHHHHHHHHHHhcCC-CCCccceeeEEecCCeeeE
Q 013004 301 FSNKNILGR--GGFGKVYKGRL---ADGKLVAVKRLKEERT-SGGELQFQTEVKIISMAV-HRNLLRLYGFCTTVTEKLL 373 (451)
Q Consensus 301 f~~~~~lG~--G~fg~Vy~~~~---~~~~~vAvK~~~~~~~-~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~l 373 (451)
|.....+|. |.+|.||.+.. .++..+|+|+-+.-.. ......-.+|+....+++ |+|.++.+..+...+..++
T Consensus 116 ~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lfi 195 (524)
T KOG0601|consen 116 FPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILFI 195 (524)
T ss_pred cccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCccee
Confidence 445577899 99999999976 3578899997432221 111223356666666665 9999999999999999999
Q ss_pred EEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHH----HHHhHhcCCCCCeeecCCCCCceeeCCC-CCccchhh
Q 013004 374 VYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSAR----GLSYLHEHCDPKIIHRDVKAANILLDED-ADQSSKTI 447 (451)
Q Consensus 374 v~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~----~L~yLH~~~~~~iiHrDlK~~NILld~~-~~~~i~df 447 (451)
-+|++. .++.++.+.... .++......+..+... |+.++|+. +|+|-|+||.||...++ ...+..||
T Consensus 196 qtE~~~-~sl~~~~~~~~~---~~p~~~l~~~~~~~~~~~~~al~~~hs~---~~~~~~~kp~~i~~~~~~~s~~~~df 267 (524)
T KOG0601|consen 196 QTELCG-ESLQSYCHTPCN---FLPDNLLWNSLRDWLSRDVTALSHLHSN---NIVHDDLKPANIFTTSDWTSCKLTDF 267 (524)
T ss_pred eecccc-chhHHhhhcccc---cCCchhhhhHHhhhhhcccccccccCCC---cccccccchhheecccccceeecCCc
Confidence 999885 688777765432 2455566666666666 99999998 99999999999999999 66666665
No 492
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=97.91 E-value=3.8e-05 Score=78.70 Aligned_cols=133 Identities=17% Similarity=0.146 Sum_probs=78.5
Q ss_pred CccCccCCceEEEEEeCCCCEEEEEEcccccccc------------------------------------cHHHHHHHHH
Q 013004 305 NILGRGGFGKVYKGRLADGKLVAVKRLKEERTSG------------------------------------GELQFQTEVK 348 (451)
Q Consensus 305 ~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~------------------------------------~~~~~~~E~~ 348 (451)
+.||.-+.|+||+|++++|+.||||+-++..... .+.+|..|++
T Consensus 167 ~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA~ 246 (538)
T KOG1235|consen 167 EPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEAK 246 (538)
T ss_pred chhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHHH
Confidence 6789999999999999999999999876532110 0112444554
Q ss_pred HHh----cCCCCC------ccceeeEEecCCeeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhc
Q 013004 349 IIS----MAVHRN------LLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHE 418 (451)
Q Consensus 349 ~l~----~l~H~n------iv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~ 418 (451)
-.. .+.|-+ |.+++..+ .....|+||||+|..+.+.-.-.... .+-.....-+.++..-+-+ +
T Consensus 247 Nae~~~~~f~~~~~~~~V~VP~Vy~~~--st~RVLtME~~~G~~i~Dl~~i~~~g---i~~~~i~~~l~~~~~~qIf-~- 319 (538)
T KOG1235|consen 247 NAERFRENFKDFSLLTYVLVPKVYWDL--STKRVLTMEYVDGIKINDLDAIDKRG---ISPHDILNKLVEAYLEQIF-K- 319 (538)
T ss_pred hHHHHHHHHHhcccccceeCCeehhhc--CcceEEEEEecCCccCCCHHHHHHcC---CCHHHHHHHHHHHHHHHHH-h-
Confidence 333 334555 33333222 34579999999998765543322111 3333333222222111212 2
Q ss_pred CCCCCeeecCCCCCceeeCCC----CCccchhh
Q 013004 419 HCDPKIIHRDVKAANILLDED----ADQSSKTI 447 (451)
Q Consensus 419 ~~~~~iiHrDlK~~NILld~~----~~~~i~df 447 (451)
.|++|.|-.|.||+++.+ +++.+.||
T Consensus 320 ---~GffHaDPHPGNilv~~~~~~~~~ivllDh 349 (538)
T KOG1235|consen 320 ---TGFFHADPHPGNILVRPNPEGDEEIVLLDH 349 (538)
T ss_pred ---cCCccCCCCCCcEEEecCCCCCccEEEEcc
Confidence 279999999999999953 34454443
No 493
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=97.91 E-value=1.8e-05 Score=69.73 Aligned_cols=52 Identities=33% Similarity=0.301 Sum_probs=44.9
Q ss_pred CChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccc
Q 013004 381 GSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSS 444 (451)
Q Consensus 381 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i 444 (451)
|+|.+++..... .++|.++..++.|++.||+|||+. + ||+|||++.++.+++
T Consensus 1 GsL~~~l~~~~~---~l~~~~~~~i~~qi~~~L~~lH~~---~------kp~Nil~~~~~~~~~ 52 (176)
T smart00750 1 VSLADILEVRGR---PLNEEEIWAVCLQCLRALRELHRQ---A------KSGNILLTWDGLLKL 52 (176)
T ss_pred CcHHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHHhc---C------CcccEeEcCccceee
Confidence 789999976432 489999999999999999999998 4 999999999887664
No 494
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=97.86 E-value=4.6e-05 Score=68.19 Aligned_cols=99 Identities=22% Similarity=0.262 Sum_probs=76.5
Q ss_pred HHHHHHHhcCCC-CCccceeeEEecCCeeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCC
Q 013004 344 QTEVKIISMAVH-RNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDP 422 (451)
Q Consensus 344 ~~E~~~l~~l~H-~niv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~ 422 (451)
..|..+++.+++ +++.+++|+|- .+++.||...+++...-... ......+|..+.+||.++++.+.++++...-
T Consensus 7 ~~E~lll~~l~~~~~~pk~lG~CG----~~~v~E~~~~~~~~~~~~~l-~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~ 81 (188)
T PF12260_consen 7 NNEPLLLQLLQGSEPFPKLLGSCG----RFYVVEYVGAGSLYGIYRPL-SQFLQSPWEQRAKIALQLLELLEELDHGPLG 81 (188)
T ss_pred ccHHHHHHHcCCCCCCCCeeeECC----CEEEEEeecCcccccccccc-ccccccCHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 457778888876 69999999994 47899999987664321000 0111268999999999999999999985333
Q ss_pred CeeecCCCCCceeeCCCCCccchhh
Q 013004 423 KIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 423 ~iiHrDlK~~NILld~~~~~~i~df 447 (451)
.+.-.|++++|+-+++++.+|+.|.
T Consensus 82 ~~~lcDv~~~nfgv~~~~~lk~iDl 106 (188)
T PF12260_consen 82 FFYLCDVSPDNFGVNDDGRLKLIDL 106 (188)
T ss_pred cEEEeecchHHeEEeCCCcEEEEec
Confidence 5778999999999999999998874
No 495
>PLN02876 acyl-CoA dehydrogenase
Probab=97.86 E-value=0.00012 Score=80.56 Aligned_cols=79 Identities=13% Similarity=0.296 Sum_probs=55.9
Q ss_pred CCccCccCCceEEEEEeCCC---CEEEEEEcccccccccHHHHHHHHHHHhcCC-CCCc--cceeeEEecC---CeeeEE
Q 013004 304 KNILGRGGFGKVYKGRLADG---KLVAVKRLKEERTSGGELQFQTEVKIISMAV-HRNL--LRLYGFCTTV---TEKLLV 374 (451)
Q Consensus 304 ~~~lG~G~fg~Vy~~~~~~~---~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~-H~ni--v~l~~~~~~~---~~~~lv 374 (451)
.+.++.|.+..+|+....++ ..+++|+............+.+|.+++..+. |.++ .+++.+|.+. +..|+|
T Consensus 43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flV 122 (822)
T PLN02876 43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYI 122 (822)
T ss_pred EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEE
Confidence 35688899999999877553 3577777644322222346889999999885 6664 6777777654 357899
Q ss_pred EecCCCCC
Q 013004 375 YPYMTNGS 382 (451)
Q Consensus 375 ~ey~~~gs 382 (451)
|||++|..
T Consensus 123 ME~v~G~~ 130 (822)
T PLN02876 123 MEYLEGRI 130 (822)
T ss_pred EEecCCcc
Confidence 99998754
No 496
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=97.85 E-value=0.00025 Score=63.82 Aligned_cols=124 Identities=21% Similarity=0.347 Sum_probs=85.9
Q ss_pred CCCccCccCCceEEEEEeCCCCEEEEEEccccc---------------ccccHHHHHHHHHHHhcCC------CCCccce
Q 013004 303 NKNILGRGGFGKVYKGRLADGKLVAVKRLKEER---------------TSGGELQFQTEVKIISMAV------HRNLLRL 361 (451)
Q Consensus 303 ~~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~---------------~~~~~~~~~~E~~~l~~l~------H~niv~l 361 (451)
....||+|+.-.||. +++.....||+.+... ......+..+|+.-...+. +.+|.++
T Consensus 5 ~~~~i~~G~~R~cy~--HP~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~ 82 (199)
T PF10707_consen 5 ESDLIAQGGERDCYQ--HPDDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRF 82 (199)
T ss_pred CCcccccCCCceEEE--CCCCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccE
Confidence 456799999999986 4455566788876554 0112345667766554444 8999999
Q ss_pred eeEEecCCeeeEEEecCCCC------ChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCcee
Q 013004 362 YGFCTTVTEKLLVYPYMTNG------SVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANIL 435 (451)
Q Consensus 362 ~~~~~~~~~~~lv~ey~~~g------sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NIL 435 (451)
+|+..+.....+|+|.+.+. +|.+++.+.. ++. .+...+-+-..||-++ +|+.+|++|+||+
T Consensus 83 ~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~~~-----~~~----~~~~~L~~f~~~l~~~---~Iv~~dl~~~NIv 150 (199)
T PF10707_consen 83 YGFVETNLGLGLVVELIRDADGNISPTLEDYLKEGG-----LTE----ELRQALDEFKRYLLDH---HIVIRDLNPHNIV 150 (199)
T ss_pred eEEEecCCceEEEEEEEECCCCCcCccHHHHHHcCC-----ccH----HHHHHHHHHHHHHHHc---CCeecCCCcccEE
Confidence 99999999999999976542 5777775432 333 2233333445677777 8999999999999
Q ss_pred eCCCC
Q 013004 436 LDEDA 440 (451)
Q Consensus 436 ld~~~ 440 (451)
+..+.
T Consensus 151 ~~~~~ 155 (199)
T PF10707_consen 151 VQRRD 155 (199)
T ss_pred EEecC
Confidence 98654
No 497
>PRK10593 hypothetical protein; Provisional
Probab=97.77 E-value=0.00033 Score=67.61 Aligned_cols=78 Identities=15% Similarity=0.108 Sum_probs=55.1
Q ss_pred CCCCccCccCCceEEEEEeCCCCEEEEEEcccccccccHHHHHHHHHHHhcCCC---CCccceeeEEec---CCeeeEEE
Q 013004 302 SNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVH---RNLLRLYGFCTT---VTEKLLVY 375 (451)
Q Consensus 302 ~~~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H---~niv~l~~~~~~---~~~~~lv~ 375 (451)
...+.||+|..+.||+....+++ +.+|..+... ....|.+|.+.++.+.- ..+.+++++|.. .+..++||
T Consensus 17 ~~~~~i~~G~~~~vy~~~~~~~~-~~~k~~~~~~---~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVm 92 (297)
T PRK10593 17 SRVECISEQPYAALWALYDSQGN-PMPLMARSFS---TPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLL 92 (297)
T ss_pred heeeecCCccceeEEEEEcCCCC-EEEEEecccc---cchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEE
Confidence 33567999999999998765554 5667643211 22368899998887753 357778877754 35689999
Q ss_pred ecCCCCCh
Q 013004 376 PYMTNGSV 383 (451)
Q Consensus 376 ey~~~gsL 383 (451)
|+++++++
T Consensus 93 E~i~G~~~ 100 (297)
T PRK10593 93 ERLRGVSV 100 (297)
T ss_pred eccCCEec
Confidence 99998754
No 498
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=97.74 E-value=0.0001 Score=66.73 Aligned_cols=132 Identities=15% Similarity=0.173 Sum_probs=81.7
Q ss_pred hcCCCCCCccCccCCceEEEEEeCCCCEEEEEEcccccccccHHH---------HHHHHHHHhcCCCCC---ccceeeEE
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQ---------FQTEVKIISMAVHRN---LLRLYGFC 365 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~---------~~~E~~~l~~l~H~n---iv~l~~~~ 365 (451)
..+|...+++-......|.+-.. +|+.+.+|..+..... .... ..+++..+..++... ...++-+.
T Consensus 30 ~~~~~~~kv~k~~~r~~ValIei-~~~kyIlK~pr~~~~r-~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~~ 107 (229)
T PF06176_consen 30 DNNYKIIKVFKNTKRNYVALIEI-DGKKYILKEPREENRR-PERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLAA 107 (229)
T ss_pred hCCceEEEeecCCCccEEEEEEE-CCcEEEEeccchhhhh-HHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceeee
Confidence 45566666666666666666665 5678889987654321 1111 233444343333222 22222222
Q ss_pred e-----cCCeeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCC
Q 013004 366 T-----TVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDA 440 (451)
Q Consensus 366 ~-----~~~~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~ 440 (451)
. -....+++|||++|..|.+... ++. .++..+++++.-+|.. |+.|+|..|.|+++++++
T Consensus 108 ekk~~~~~~~~~ll~EYIeG~~l~d~~~--------i~e----~~~~ki~~~ikqlH~~---G~~HGD~hpgNFlv~~~~ 172 (229)
T PF06176_consen 108 EKKIFRYTSSYVLLMEYIEGVELNDIED--------IDE----DLAEKIVEAIKQLHKH---GFYHGDPHPGNFLVSNNG 172 (229)
T ss_pred eeeeccceeEEEEEEEEecCeecccchh--------cCH----HHHHHHHHHHHHHHHc---CCccCCCCcCcEEEECCc
Confidence 2 2244579999999987755432 221 2455677889999999 999999999999999665
Q ss_pred Cccchhh
Q 013004 441 DQSSKTI 447 (451)
Q Consensus 441 ~~~i~df 447 (451)
.++.|+
T Consensus 173 -i~iID~ 178 (229)
T PF06176_consen 173 -IRIIDT 178 (229)
T ss_pred -EEEEEC
Confidence 777776
No 499
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=97.74 E-value=0.00021 Score=66.77 Aligned_cols=74 Identities=9% Similarity=0.069 Sum_probs=50.0
Q ss_pred cCccCC-ceEEEEEeCCCCEEEEEEcccccccccHHHHHHHHHHHhcCC-CCCccceeeEEecCCeeeEEEecCCCCChh
Q 013004 307 LGRGGF-GKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAV-HRNLLRLYGFCTTVTEKLLVYPYMTNGSVA 384 (451)
Q Consensus 307 lG~G~f-g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lv~ey~~~gsL~ 384 (451)
|-.|.+ ..||+.... +..+.||+..... .....+|++++..+. +--+.+++++....+..++||||++|.++.
T Consensus 6 ~~~g~~~~~v~~~~~~-~~~~~vk~~~~~~----~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~ 80 (244)
T cd05150 6 VTEGQSGATVYRLDGK-NPGLYLKIAPSGP----TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPAA 80 (244)
T ss_pred cCCCCCcCeEEEEcCC-CCcEEEEecCCCc----ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccHh
Confidence 445555 689998764 4677888764432 224667888877664 334556677766666689999999987765
Q ss_pred H
Q 013004 385 S 385 (451)
Q Consensus 385 ~ 385 (451)
.
T Consensus 81 ~ 81 (244)
T cd05150 81 A 81 (244)
T ss_pred H
Confidence 3
No 500
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=97.62 E-value=2.8e-05 Score=85.04 Aligned_cols=91 Identities=34% Similarity=0.534 Sum_probs=72.2
Q ss_pred CCcc-ccCCCCCCEEeCcCCccCccCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeeccccccCCCChhhhhc
Q 013004 87 LAPE-LGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTT 165 (451)
Q Consensus 87 ~p~~-l~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~ 165 (451)
++.+ |..++.|.+||||+|.=-+.+|..+++|-+|++|+|++..+. .+|..+++|+.|.+||+..+.-...+|.....
T Consensus 562 is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~ 640 (889)
T KOG4658|consen 562 ISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLE 640 (889)
T ss_pred cCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcccccCCCcc-ccchHHHHHHhhheeccccccccccccchhhh
Confidence 4444 556888888888887776788888888888888888888887 88888888888888888887765566777777
Q ss_pred CCCCCeeccCCcc
Q 013004 166 ITSLNILDLSNNR 178 (451)
Q Consensus 166 l~~L~~l~ls~N~ 178 (451)
+.+|++|.+-...
T Consensus 641 L~~Lr~L~l~~s~ 653 (889)
T KOG4658|consen 641 LQSLRVLRLPRSA 653 (889)
T ss_pred cccccEEEeeccc
Confidence 8888888775443
Done!