Query 013004
Match_columns 451
No_of_seqs 512 out of 3092
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 20:24:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013004.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013004hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4asz_A BDNF/NT-3 growth factor 100.0 2.6E-33 9E-38 268.7 11.7 145 299-447 13-172 (299)
2 4gt4_A Tyrosine-protein kinase 100.0 3.8E-33 1.3E-37 268.8 12.1 144 301-447 28-189 (308)
3 4aoj_A High affinity nerve gro 100.0 9.4E-33 3.2E-37 268.5 12.1 145 299-447 41-202 (329)
4 4b9d_A Serine/threonine-protei 100.0 2.9E-32 9.9E-37 265.7 14.2 144 299-447 24-169 (350)
5 3omv_A RAF proto-oncogene seri 100.0 3.9E-32 1.3E-36 260.9 13.3 141 298-447 35-176 (307)
6 4aw0_A HPDK1, 3-phosphoinositi 100.0 3.2E-32 1.1E-36 261.1 11.1 142 299-447 32-176 (311)
7 4fih_A Serine/threonine-protei 100.0 9.8E-32 3.3E-36 261.6 12.8 140 299-447 74-214 (346)
8 3hmm_A TGF-beta receptor type- 100.0 2.3E-31 7.9E-36 256.4 12.2 140 300-447 4-152 (303)
9 4g31_A Eukaryotic translation 100.0 2.4E-31 8.3E-36 255.4 11.4 145 299-447 5-162 (299)
10 4fie_A Serine/threonine-protei 100.0 5.2E-31 1.8E-35 262.7 13.8 140 299-447 151-291 (423)
11 3hyh_A Carbon catabolite-derep 100.0 5.1E-31 1.7E-35 249.2 12.4 141 299-447 13-156 (275)
12 3ubd_A Ribosomal protein S6 ki 100.0 1.1E-31 3.6E-36 257.4 7.6 142 299-447 24-170 (304)
13 3fpq_A Serine/threonine-protei 100.0 7.8E-31 2.7E-35 250.0 12.5 140 303-447 30-176 (290)
14 4g3f_A NF-kappa-beta-inducing 100.0 5E-31 1.7E-35 255.8 11.3 136 299-447 58-195 (336)
15 4ase_A Vascular endothelial gr 100.0 3.7E-31 1.3E-35 259.4 7.7 154 291-447 56-229 (353)
16 3uim_A Brassinosteroid insensi 100.0 6.3E-29 2.1E-33 241.7 14.1 174 274-447 5-178 (326)
17 4b99_A Mitogen-activated prote 100.0 9.4E-29 3.2E-33 246.4 11.9 141 299-447 54-202 (398)
18 3v5w_A G-protein coupled recep 99.9 4.3E-28 1.5E-32 252.7 12.9 143 298-447 188-336 (689)
19 4f9c_A Cell division cycle 7-r 99.9 5.9E-28 2E-32 237.9 11.5 139 296-447 18-162 (361)
20 3uto_A Twitchin; kinase, muscl 99.9 4.8E-27 1.6E-31 245.0 12.1 143 298-447 156-301 (573)
21 2qkw_B Protein kinase; three-h 99.9 1.2E-26 4E-31 225.3 12.7 152 292-447 32-183 (321)
22 4aw2_A Serine/threonine-protei 99.9 2E-26 7E-31 232.8 10.4 152 290-447 65-219 (437)
23 3zgw_A Maternal embryonic leuc 99.9 4.7E-26 1.6E-30 223.6 12.7 143 298-447 9-152 (347)
24 2qol_A Ephrin receptor; recept 99.9 4.8E-26 1.6E-30 225.9 12.6 144 298-447 44-191 (373)
25 3fe3_A MAP/microtubule affinit 99.9 6.3E-26 2.1E-30 221.1 13.2 143 298-447 14-158 (328)
26 2psq_A Fibroblast growth facto 99.9 5.9E-26 2E-30 225.0 13.1 147 298-447 80-247 (370)
27 3qd2_B Eukaryotic translation 99.9 7.7E-26 2.6E-30 219.9 13.4 146 298-447 5-208 (332)
28 3kul_A Ephrin type-A receptor 99.9 7.1E-26 2.4E-30 220.4 12.2 143 299-447 49-195 (325)
29 3cbl_A C-FES, proto-oncogene t 99.9 3.7E-26 1.3E-30 227.1 10.1 144 298-447 113-257 (377)
30 2vd5_A DMPK protein; serine/th 99.9 4.2E-26 1.4E-30 228.9 10.1 152 290-447 52-206 (412)
31 3v8s_A RHO-associated protein 99.9 4.3E-26 1.5E-30 228.6 10.0 149 291-447 61-212 (410)
32 1o6l_A RAC-beta serine/threoni 99.9 1.1E-25 3.9E-30 220.0 12.6 143 298-447 4-149 (337)
33 3tki_A Serine/threonine-protei 99.9 8.4E-26 2.9E-30 219.7 11.2 143 298-447 6-149 (323)
34 3fxz_A Serine/threonine-protei 99.9 2.9E-25 1E-29 213.3 14.7 141 298-447 19-160 (297)
35 3s95_A LIMK-1, LIM domain kina 99.9 2.7E-25 9.3E-30 214.5 14.3 142 299-447 10-152 (310)
36 3txo_A PKC-L, NPKC-ETA, protei 99.9 1.3E-25 4.3E-30 221.1 12.0 145 296-447 20-168 (353)
37 2c30_A Serine/threonine-protei 99.9 3.5E-25 1.2E-29 215.1 14.7 151 288-447 24-185 (321)
38 2nru_A Interleukin-1 receptor- 99.9 6.2E-25 2.1E-29 211.5 16.3 158 285-447 11-177 (307)
39 1fot_A TPK1 delta, CAMP-depend 99.9 2.2E-25 7.5E-30 216.3 13.1 143 298-447 5-150 (318)
40 1luf_A Muscle-specific tyrosin 99.9 1.6E-25 5.3E-30 219.1 11.7 149 296-447 44-218 (343)
41 3l9p_A Anaplastic lymphoma kin 99.9 1.9E-25 6.5E-30 221.1 11.6 147 298-447 70-228 (367)
42 1xjd_A Protein kinase C, theta 99.9 2E-25 6.7E-30 219.0 11.5 146 295-447 13-162 (345)
43 4fr4_A YANK1, serine/threonine 99.9 2.7E-25 9.2E-30 220.9 12.5 143 298-447 14-159 (384)
44 4hcu_A Tyrosine-protein kinase 99.9 3.4E-25 1.2E-29 209.3 12.6 142 298-447 9-150 (269)
45 4dc2_A Protein kinase C IOTA t 99.9 2.2E-25 7.4E-30 222.4 11.8 143 298-447 51-197 (396)
46 1rdq_E PKA C-alpha, CAMP-depen 99.9 3.9E-25 1.3E-29 217.4 12.9 142 299-447 41-185 (350)
47 4eqm_A Protein kinase; transfe 99.9 4.3E-25 1.5E-29 211.7 13.0 142 299-447 11-155 (294)
48 3a8x_A Protein kinase C IOTA t 99.9 3.9E-25 1.3E-29 217.0 12.9 142 299-447 9-154 (345)
49 3niz_A Rhodanese family protei 99.9 4.4E-25 1.5E-29 213.4 12.5 143 298-447 20-163 (311)
50 2pmi_A Negative RE, cyclin-dep 99.9 6.6E-25 2.3E-29 212.7 13.7 146 298-447 4-152 (317)
51 2yab_A Death-associated protei 99.9 7.5E-25 2.6E-29 216.2 14.2 143 298-447 11-163 (361)
52 3a62_A Ribosomal protein S6 ki 99.9 3.4E-25 1.1E-29 215.8 11.5 143 298-447 16-165 (327)
53 3gni_B Strad alpha; kinase fol 99.9 6.9E-25 2.4E-29 218.7 13.8 145 298-447 24-172 (389)
54 3gen_A Tyrosine-protein kinase 99.9 6.6E-25 2.3E-29 208.8 12.9 142 298-447 23-164 (283)
55 3sxs_A Cytoplasmic tyrosine-pr 99.9 6E-25 2.1E-29 207.4 12.3 142 298-447 7-148 (268)
56 3vhe_A Vascular endothelial gr 99.9 9.9E-26 3.4E-30 222.0 7.2 154 291-447 14-237 (359)
57 2i0e_A Protein kinase C-beta I 99.9 5E-25 1.7E-29 216.8 11.8 145 296-447 17-165 (353)
58 1ob3_A PFPK5, cell division co 99.9 5.5E-25 1.9E-29 210.1 11.8 142 299-447 2-144 (288)
59 3c0i_A Peripheral plasma membr 99.9 3.5E-25 1.2E-29 217.9 10.7 146 299-447 24-177 (351)
60 3p86_A Serine/threonine-protei 99.9 3.3E-25 1.1E-29 214.2 10.2 147 296-447 34-183 (309)
61 2ivs_A Proto-oncogene tyrosine 99.9 4.1E-25 1.4E-29 213.2 10.8 147 298-447 22-194 (314)
62 3tt0_A Basic fibroblast growth 99.9 5E-25 1.7E-29 219.2 11.5 147 298-447 68-235 (382)
63 1tki_A Titin; serine kinase, m 99.9 1.3E-24 4.6E-29 211.0 13.6 142 298-447 4-148 (321)
64 4euu_A Serine/threonine-protei 99.9 1E-24 3.4E-29 211.5 12.6 145 299-447 9-160 (319)
65 1opk_A P150, C-ABL, proto-onco 99.9 6.9E-25 2.4E-29 225.6 12.1 144 297-447 218-362 (495)
66 3is5_A Calcium-dependent prote 99.9 7.7E-25 2.6E-29 208.9 11.3 146 299-447 22-171 (285)
67 1qcf_A Haematopoetic cell kina 99.9 5.6E-25 1.9E-29 224.0 10.9 144 296-447 185-328 (454)
68 3o0g_A Cell division protein k 99.9 1.4E-24 4.7E-29 207.7 13.0 142 299-447 2-145 (292)
69 3uqc_A Probable conserved tran 99.9 1E-24 3.5E-29 208.3 12.0 140 299-447 31-173 (286)
70 3uc3_A Serine/threonine-protei 99.9 1.5E-24 5.1E-29 214.2 13.2 141 298-447 19-162 (361)
71 3soc_A Activin receptor type-2 99.9 6.2E-25 2.1E-29 213.4 10.2 142 298-447 23-175 (322)
72 1k9a_A Carboxyl-terminal SRC k 99.9 1.3E-24 4.5E-29 220.9 13.0 142 297-447 191-333 (450)
73 2zv2_A Calcium/calmodulin-depe 99.9 8.8E-25 3E-29 209.7 11.1 142 298-447 12-181 (298)
74 2y0a_A Death-associated protei 99.9 1.8E-24 6.3E-29 210.5 13.5 142 299-447 11-162 (326)
75 2acx_A G protein-coupled recep 99.9 1.3E-24 4.5E-29 225.3 13.1 146 297-447 182-330 (576)
76 3h4j_B AMPK kdaid, SNF1-like p 99.9 9.1E-25 3.1E-29 213.5 11.2 141 299-447 9-152 (336)
77 3c4z_A Rhodopsin kinase; Ser/T 99.9 1.6E-24 5.4E-29 224.0 13.5 147 298-447 184-333 (543)
78 3kmu_A ILK, integrin-linked ki 99.9 1.1E-24 3.7E-29 205.5 11.3 146 298-447 9-157 (271)
79 2pvf_A Fibroblast growth facto 99.9 1.4E-24 4.6E-29 212.0 12.2 147 298-447 34-201 (334)
80 2r5t_A Serine/threonine-protei 99.9 7.8E-25 2.7E-29 217.0 10.6 142 299-447 38-183 (373)
81 4e5w_A Tyrosine-protein kinase 99.9 1.2E-24 4.1E-29 208.9 11.5 142 300-447 22-170 (302)
82 2bdw_A Hypothetical protein K1 99.9 1.6E-24 5.5E-29 214.0 12.6 144 297-447 27-175 (362)
83 2y94_A 5'-AMP-activated protei 99.9 1.6E-24 5.4E-29 221.2 12.9 142 299-447 16-160 (476)
84 1rjb_A FL cytokine receptor; k 99.9 9.9E-25 3.4E-29 213.6 10.8 149 296-447 42-216 (344)
85 4ejn_A RAC-alpha serine/threon 99.9 5.9E-25 2E-29 223.3 9.3 143 298-447 147-293 (446)
86 3ork_A Serine/threonine protei 99.9 5.1E-25 1.7E-29 212.9 8.3 143 298-447 11-160 (311)
87 3e7e_A HBUB1, BUB1A, mitotic c 99.9 1.1E-24 3.6E-29 215.4 10.8 144 297-447 63-227 (365)
88 1x8b_A WEE1HU, WEE1-like prote 99.9 1.4E-24 4.7E-29 206.5 11.1 140 298-440 10-152 (289)
89 1p4o_A Insulin-like growth fac 99.9 7.3E-25 2.5E-29 212.5 9.1 152 293-447 19-182 (322)
90 3poz_A Epidermal growth factor 99.9 1.4E-24 4.8E-29 211.3 11.1 142 299-447 15-161 (327)
91 2yex_A Serine/threonine-protei 99.9 2E-24 7E-29 204.4 11.9 143 298-447 6-149 (276)
92 1mp8_A Focal adhesion kinase 1 99.9 1.4E-24 4.6E-29 206.6 10.5 143 298-447 14-160 (281)
93 3ugc_A Tyrosine-protein kinase 99.9 6.5E-25 2.2E-29 210.2 8.3 143 298-447 9-158 (295)
94 3p1a_A MYT1 kinase, membrane-a 99.9 1.6E-24 5.6E-29 209.4 11.0 143 298-447 56-201 (311)
95 3t9t_A Tyrosine-protein kinase 99.9 2.2E-24 7.6E-29 203.1 11.5 141 299-447 8-148 (267)
96 1t46_A HOMO sapiens V-KIT hard 99.9 1.1E-24 3.9E-29 210.0 9.7 147 298-447 22-189 (313)
97 3q4u_A Activin receptor type-1 99.9 3E-24 1E-28 205.9 12.2 137 298-447 7-157 (301)
98 1fmk_A C-SRC, P60-SRC, tyrosin 99.9 1.2E-24 4.2E-29 221.3 10.0 143 297-447 182-324 (452)
99 3fdn_A Serine/threonine-protei 99.9 2.5E-24 8.5E-29 204.5 11.4 143 298-447 8-153 (279)
100 3qup_A Tyrosine-protein kinase 99.9 9.6E-25 3.3E-29 211.8 8.6 149 296-447 20-181 (323)
101 2vuw_A Serine/threonine-protei 99.9 1.1E-25 3.7E-30 220.0 1.9 141 298-447 19-226 (336)
102 3lxp_A Non-receptor tyrosine-p 99.9 4.5E-24 1.5E-28 206.9 13.3 139 301-447 33-178 (318)
103 3soa_A Calcium/calmodulin-depe 99.9 2.5E-24 8.4E-29 218.2 11.7 144 297-447 9-157 (444)
104 1mqb_A Ephrin type-A receptor 99.9 2.7E-24 9.2E-29 209.9 11.5 143 299-447 44-191 (333)
105 2eue_A Carbon catabolite derep 99.9 6.9E-24 2.4E-28 201.0 14.0 141 299-447 13-156 (275)
106 4eut_A Serine/threonine-protei 99.9 2.9E-24 1E-28 214.8 11.9 145 299-447 9-160 (396)
107 3rp9_A Mitogen-activated prote 99.9 3.1E-24 1.1E-28 218.7 12.3 141 299-447 53-200 (458)
108 4agu_A Cyclin-dependent kinase 99.9 4E-24 1.4E-28 206.2 12.3 142 299-447 3-146 (311)
109 2ac3_A MAP kinase-interacting 99.9 9.7E-24 3.3E-28 204.0 14.9 141 299-447 12-158 (316)
110 1fvr_A Tyrosine-protein kinase 99.9 3.9E-24 1.3E-28 208.1 12.0 146 299-447 25-186 (327)
111 1vzo_A Ribosomal protein S6 ki 99.9 1.6E-24 5.6E-29 213.4 9.4 143 298-447 53-203 (355)
112 3cok_A Serine/threonine-protei 99.9 3.9E-24 1.3E-28 202.9 11.7 144 298-447 10-156 (278)
113 2w4o_A Calcium/calmodulin-depe 99.9 3.5E-24 1.2E-28 210.5 11.6 140 298-447 52-195 (349)
114 3eqc_A Dual specificity mitoge 99.9 3E-24 1E-28 211.7 11.0 144 298-447 32-176 (360)
115 3mtl_A Cell division protein k 99.9 1.6E-24 5.4E-29 210.7 8.9 142 299-447 2-144 (324)
116 3c1x_A Hepatocyte growth facto 99.9 2.6E-24 8.9E-29 213.3 10.5 141 301-447 91-236 (373)
117 2buj_A Serine/threonine-protei 99.9 3.5E-24 1.2E-28 207.2 11.1 147 298-448 28-179 (317)
118 3dls_A PAS domain-containing s 99.9 2.9E-24 9.9E-29 209.9 10.5 144 297-447 22-174 (335)
119 4fvq_A Tyrosine-protein kinase 99.9 2.3E-24 8E-29 205.5 9.6 143 298-447 7-165 (289)
120 2rku_A Serine/threonine-protei 99.9 7.9E-24 2.7E-28 202.6 13.2 142 299-447 15-159 (294)
121 1kob_A Twitchin; kinase, intra 99.9 6.8E-24 2.3E-28 211.2 13.2 143 298-447 50-195 (387)
122 2i1m_A Macrophage colony-stimu 99.9 8.4E-25 2.9E-29 213.2 6.4 150 295-447 42-208 (333)
123 4f0f_A Serine/threonine-protei 99.9 1.3E-23 4.4E-28 200.2 14.5 142 298-447 18-173 (287)
124 3kex_A Receptor tyrosine-prote 99.9 1.9E-24 6.6E-29 210.1 8.9 142 299-447 13-159 (325)
125 2h8h_A Proto-oncogene tyrosine 99.9 1.8E-24 6.2E-29 224.5 9.2 144 296-447 264-407 (535)
126 3lb7_A RAF proto-oncogene seri 99.9 1E-23 3.4E-28 203.5 13.8 141 298-447 35-176 (307)
127 3pg1_A Mitogen-activated prote 99.9 6.9E-24 2.4E-28 209.2 12.9 152 289-447 12-178 (362)
128 2ozo_A Tyrosine-protein kinase 99.9 3.8E-24 1.3E-28 225.4 11.7 135 306-447 343-480 (613)
129 3gxj_A TGF-beta receptor type- 99.9 2.1E-24 7.1E-29 207.1 8.8 136 299-447 3-152 (303)
130 3f3z_A Calcium/calmodulin-depe 99.9 7.6E-24 2.6E-28 200.8 12.6 142 298-447 8-153 (277)
131 2a2a_A Death-associated protei 99.9 6.7E-24 2.3E-28 205.9 12.4 143 298-447 11-163 (321)
132 2xir_A Vascular endothelial gr 99.9 1.2E-24 4.2E-29 210.1 7.2 155 290-447 18-192 (316)
133 3pfq_A PKC-B, PKC-beta, protei 99.9 6.2E-24 2.1E-28 226.0 13.2 145 296-447 338-486 (674)
134 2owb_A Serine/threonine-protei 99.9 8.6E-24 2.9E-28 206.5 13.1 142 299-447 41-185 (335)
135 3bhy_A Death-associated protei 99.9 8.9E-24 3E-28 200.9 12.8 142 299-447 5-156 (283)
136 3kfa_A Tyrosine-protein kinase 99.9 1.5E-24 5.3E-29 206.7 7.5 144 297-447 11-155 (288)
137 3f66_A Hepatocyte growth facto 99.9 5.7E-24 1.9E-28 203.9 11.4 143 299-447 25-172 (298)
138 2h6d_A 5'-AMP-activated protei 99.9 7.3E-24 2.5E-28 200.7 12.0 143 298-447 10-155 (276)
139 3a7i_A MST3 kinase, serine/thr 99.9 1.1E-23 3.9E-28 202.4 13.4 141 299-447 22-163 (303)
140 1u5q_A Serine/threonine protei 99.9 4.2E-24 1.4E-28 209.9 10.5 142 299-447 54-198 (348)
141 2h34_A Serine/threonine-protei 99.9 9.4E-24 3.2E-28 203.8 12.8 143 298-447 33-178 (309)
142 3pls_A Macrophage-stimulating 99.9 6.4E-24 2.2E-28 203.3 11.5 141 301-447 23-168 (298)
143 2vwi_A Serine/threonine-protei 99.9 5.5E-24 1.9E-28 204.1 11.1 149 296-447 12-165 (303)
144 3kk8_A Calcium/calmodulin depe 99.9 1.1E-23 3.9E-28 200.2 13.1 143 298-447 5-152 (284)
145 2izr_A Casein kinase I isoform 99.9 7.6E-24 2.6E-28 206.3 12.1 139 299-447 9-154 (330)
146 1u59_A Tyrosine-protein kinase 99.9 6E-24 2.1E-28 202.7 11.0 141 300-447 10-154 (287)
147 3kn6_A Ribosomal protein S6 ki 99.9 1.9E-23 6.4E-28 203.3 14.6 133 304-447 16-153 (325)
148 2w5a_A Serine/threonine-protei 99.9 4.2E-24 1.4E-28 202.7 9.7 147 298-447 5-160 (279)
149 3i6u_A CDS1, serine/threonine- 99.9 8E-24 2.7E-28 213.2 12.2 144 296-447 132-286 (419)
150 2yfx_A Tyrosine-protein kinase 99.9 9.9E-24 3.4E-28 205.2 12.4 147 298-447 29-187 (327)
151 1qpc_A LCK kinase; alpha beta 99.9 5.4E-24 1.9E-28 202.0 10.3 142 298-447 12-153 (279)
152 2x4f_A Myosin light chain kina 99.9 1.1E-23 3.8E-28 208.8 12.9 137 304-447 94-233 (373)
153 2wqm_A Serine/threonine-protei 99.9 1.1E-23 3.8E-28 203.1 12.4 146 299-447 32-180 (310)
154 2pml_X PFPK7, Ser/Thr protein 99.9 6.3E-24 2.1E-28 208.2 10.8 144 298-447 30-196 (348)
155 3hko_A Calcium/calmodulin-depe 99.9 3.5E-24 1.2E-28 209.7 8.9 150 295-447 22-214 (345)
156 2vgo_A Serine/threonine-protei 99.9 1.1E-23 3.6E-28 200.6 11.9 142 299-447 14-158 (284)
157 3llt_A Serine/threonine kinase 99.9 5.9E-24 2E-28 209.5 10.3 152 288-447 24-206 (360)
158 3brb_A Proto-oncogene tyrosine 99.9 5.4E-24 1.8E-28 205.6 9.8 150 295-447 30-191 (313)
159 4aaa_A Cyclin-dependent kinase 99.9 1.2E-23 3.9E-28 205.1 11.9 142 299-447 25-168 (331)
160 3n9x_A Phosphotransferase; mal 99.9 9.4E-24 3.2E-28 213.5 11.6 142 298-447 25-173 (432)
161 3lzb_A Epidermal growth factor 99.9 1.2E-23 4E-28 204.9 11.8 143 298-447 14-161 (327)
162 3dtc_A Mitogen-activated prote 99.9 1E-23 3.5E-28 199.2 10.9 144 298-447 6-160 (271)
163 3q5i_A Protein kinase; CDPK, m 99.9 1.8E-23 6.3E-28 215.5 13.8 143 298-447 35-193 (504)
164 3oz6_A Mitogen-activated prote 99.9 1.9E-23 6.4E-28 208.3 13.1 142 297-447 7-153 (388)
165 3nyv_A Calmodulin-domain prote 99.9 1.5E-23 5.2E-28 215.1 12.8 143 298-447 25-173 (484)
166 2j7t_A Serine/threonine-protei 99.9 1.9E-23 6.5E-28 200.5 12.7 143 298-447 18-161 (302)
167 2y7j_A Phosphorylase B kinase 99.9 2.2E-23 7.4E-28 206.1 13.2 147 294-447 89-244 (365)
168 3an0_A Dual specificity mitoge 99.9 1.4E-23 4.8E-28 205.2 11.7 147 298-447 50-198 (340)
169 3mdy_A Bone morphogenetic prot 99.9 2.7E-23 9.2E-28 202.5 13.6 143 295-447 33-186 (337)
170 3g33_A Cell division protein k 99.9 2.9E-23 1E-27 200.0 13.6 145 297-447 7-164 (308)
171 3cc6_A Protein tyrosine kinase 99.9 9.2E-24 3.1E-28 200.7 9.8 143 298-447 11-157 (281)
172 3lij_A Calcium/calmodulin depe 99.9 1.5E-23 5.1E-28 215.7 12.1 142 299-447 37-183 (494)
173 3gbz_A Kinase, CMGC CDK; ssgci 99.9 1E-23 3.5E-28 205.4 10.2 144 296-447 31-181 (329)
174 2r3i_A Cell division protein k 99.9 2.1E-23 7.3E-28 199.9 12.3 143 299-447 3-147 (299)
175 1cm8_A Phosphorylated MAP kina 99.9 1.5E-23 5E-28 207.6 11.4 140 299-447 25-172 (367)
176 2a19_B Interferon-induced, dou 99.9 1.1E-23 3.7E-28 200.2 10.0 140 298-447 10-166 (284)
177 3lxl_A Tyrosine-protein kinase 99.9 1.1E-23 3.7E-28 204.9 10.2 142 299-447 23-171 (327)
178 3rgz_A Protein brassinosteroid 99.9 7E-24 2.4E-28 229.6 9.8 125 89-214 626-750 (768)
179 3mi9_A Cell division protein k 99.9 2.5E-23 8.5E-28 204.4 12.7 142 299-447 17-168 (351)
180 1zy4_A Serine/threonine-protei 99.9 1.5E-23 5.1E-28 200.9 10.8 142 298-447 5-160 (303)
181 4fl3_A Tyrosine-protein kinase 99.9 1.6E-23 5.5E-28 221.3 12.1 135 305-447 375-513 (635)
182 3mwu_A Calmodulin-domain prote 99.9 1.7E-23 5.8E-28 214.9 11.8 143 298-447 21-168 (486)
183 3dbq_A Dual specificity protei 99.9 1.3E-23 4.5E-28 205.8 10.5 140 299-447 9-151 (343)
184 1ua2_A CAK, cell division prot 99.9 1.6E-23 5.3E-28 205.6 10.8 145 296-447 7-156 (346)
185 2clq_A Mitogen-activated prote 99.9 7E-23 2.4E-27 195.7 14.9 144 299-447 22-167 (295)
186 2qr7_A Ribosomal protein S6 ki 99.9 1.7E-23 5.7E-28 205.1 10.8 138 298-447 21-164 (342)
187 2jam_A Calcium/calmodulin-depe 99.9 2.7E-23 9.2E-28 199.9 11.8 142 298-447 8-153 (304)
188 3og7_A AKAP9-BRAF fusion prote 99.9 1.6E-23 5.6E-28 200.0 10.1 141 298-447 23-164 (289)
189 1t4h_A Serine/threonine-protei 99.9 4.3E-23 1.5E-27 197.1 13.0 142 301-447 28-176 (290)
190 1b6c_B TGF-B superfamily recep 99.9 5.8E-23 2E-27 200.7 14.2 140 295-447 38-191 (342)
191 2ycf_A Serine/threonine-protei 99.9 2.4E-23 8.1E-28 202.0 11.3 143 297-447 8-161 (322)
192 1xbb_A Tyrosine-protein kinase 99.9 1.9E-23 6.6E-28 199.6 10.5 142 298-447 15-161 (291)
193 2w1i_A JAK2; chromosomal rearr 99.9 2.3E-23 7.8E-28 202.6 11.2 142 299-447 41-189 (326)
194 2eva_A TAK1 kinase - TAB1 chim 99.9 1.6E-23 5.6E-28 202.0 10.1 142 299-447 8-150 (307)
195 3ttj_A Mitogen-activated prote 99.9 1.9E-23 6.6E-28 213.0 11.0 140 298-447 61-208 (464)
196 3byv_A Rhoptry kinase; malaria 99.9 4.6E-24 1.6E-28 211.9 6.2 146 298-447 72-250 (377)
197 3eb0_A Putative uncharacterize 99.9 1.6E-23 5.4E-28 208.4 10.0 144 295-447 3-186 (383)
198 1phk_A Phosphorylase kinase; g 99.9 3E-23 1E-27 198.7 11.6 143 298-447 16-168 (298)
199 3fme_A Dual specificity mitoge 99.9 2.2E-23 7.4E-28 198.8 10.4 147 298-447 6-154 (290)
200 1nxk_A MAP kinase-activated pr 99.9 2.4E-23 8.3E-28 208.3 11.1 138 299-447 61-208 (400)
201 3com_A Serine/threonine-protei 99.9 5.4E-23 1.8E-27 198.6 13.0 142 297-447 27-169 (314)
202 2wtk_C Serine/threonine-protei 99.9 7E-23 2.4E-27 196.8 13.7 144 298-447 4-153 (305)
203 2b9h_A MAP kinase FUS3, mitoge 99.9 3.1E-23 1.1E-27 203.6 11.2 141 298-447 10-156 (353)
204 3op5_A Serine/threonine-protei 99.9 1.7E-23 5.9E-28 206.7 9.1 143 298-447 34-198 (364)
205 2zmd_A Dual specificity protei 99.9 3.1E-23 1E-27 206.9 11.0 140 299-447 56-198 (390)
206 3qyz_A Mitogen-activated prote 99.9 4.1E-23 1.4E-27 204.0 11.5 141 298-447 26-172 (364)
207 1byg_A CSK, protein (C-termina 99.9 1.7E-23 5.8E-28 198.6 8.1 141 298-447 20-161 (278)
208 1csn_A Casein kinase-1; phosph 99.9 1.1E-22 3.6E-27 194.8 13.7 140 298-447 9-155 (298)
209 2x7f_A TRAF2 and NCK-interacti 99.9 1.6E-23 5.6E-28 203.3 7.9 147 294-447 19-173 (326)
210 2wei_A Calmodulin-domain prote 99.9 9.2E-23 3.2E-27 194.5 12.8 145 296-447 19-168 (287)
211 3lm5_A Serine/threonine-protei 99.9 5.5E-23 1.9E-27 200.1 11.3 148 295-447 24-178 (327)
212 3g2f_A Bone morphogenetic prot 99.9 3.9E-23 1.3E-27 201.5 10.1 140 298-447 12-164 (336)
213 3m2w_A MAP kinase-activated pr 99.9 8E-23 2.7E-27 196.3 12.0 138 299-447 17-164 (299)
214 2fst_X Mitogen-activated prote 99.9 4.6E-23 1.6E-27 203.9 10.1 141 298-447 28-176 (367)
215 2j0j_A Focal adhesion kinase 1 99.9 5.4E-23 1.8E-27 218.1 11.2 145 296-447 387-535 (656)
216 3nsz_A CK II alpha, casein kin 99.9 8.8E-23 3E-27 198.5 11.8 135 299-447 36-175 (330)
217 2xrw_A Mitogen-activated prote 99.9 8.6E-23 3E-27 202.3 11.8 140 298-447 24-171 (371)
218 2pzi_A Probable serine/threoni 99.9 3.1E-23 1.1E-27 221.5 9.1 139 299-447 80-225 (681)
219 1u46_A ACK-1, activated CDC42 99.9 6.4E-23 2.2E-27 195.6 9.3 142 299-447 18-165 (291)
220 2i6l_A Mitogen-activated prote 99.9 1.1E-22 3.9E-27 196.4 11.1 139 299-447 11-165 (320)
221 1blx_A Cyclin-dependent kinase 99.9 1E-22 3.5E-27 197.6 10.7 145 297-447 9-164 (326)
222 2y4i_B KSR2, HKSR2, kinase sup 99.9 5.8E-23 2E-27 198.7 8.8 144 295-447 29-173 (319)
223 4exu_A Mitogen-activated prote 99.9 1.5E-22 5.1E-27 200.6 11.1 139 299-447 42-188 (371)
224 2v62_A Serine/threonine-protei 99.9 5.3E-23 1.8E-27 201.7 7.7 141 299-447 37-197 (345)
225 3e3p_A Protein kinase, putativ 99.9 2.6E-22 9E-27 197.5 12.3 149 293-447 17-176 (360)
226 3coi_A Mitogen-activated prote 99.9 1.8E-22 6.3E-27 198.4 10.7 139 299-447 24-170 (353)
227 3q60_A ROP5B; pseudokinase, tr 99.9 7.7E-23 2.6E-27 202.6 7.9 141 299-447 62-238 (371)
228 1j1b_A Glycogen synthase kinas 99.9 1.2E-22 4.2E-27 204.5 9.2 139 300-447 55-201 (420)
229 3ll6_A Cyclin G-associated kin 99.9 1.5E-22 5.2E-27 196.9 9.4 145 299-447 28-182 (337)
230 2jii_A Serine/threonine-protei 99.9 5.8E-23 2E-27 201.9 6.1 137 299-447 42-205 (352)
231 3rgf_A Cyclin-dependent kinase 99.9 2.9E-22 1E-26 200.8 11.2 140 301-447 22-176 (405)
232 3kvw_A DYRK2, dual specificity 99.9 3.4E-22 1.2E-26 201.8 11.7 142 298-447 96-246 (429)
233 2iwi_A Serine/threonine-protei 99.9 6.3E-23 2.2E-27 198.0 5.8 146 295-447 27-184 (312)
234 4azs_A Methyltransferase WBDD; 99.9 2.2E-22 7.4E-27 209.8 9.9 131 307-447 242-383 (569)
235 4e7w_A Glycogen synthase kinas 99.9 1.8E-22 6.2E-27 201.6 8.8 140 299-447 40-186 (394)
236 3a99_A Proto-oncogene serine/t 99.9 1.7E-22 5.9E-27 195.9 8.1 144 297-447 41-194 (320)
237 4hgt_A Casein kinase I isoform 99.9 7.1E-22 2.4E-26 188.7 12.0 141 297-447 7-152 (296)
238 3aln_A Dual specificity mitoge 99.9 5.3E-22 1.8E-26 192.9 10.8 147 298-447 21-170 (327)
239 3cek_A Dual specificity protei 99.9 3.9E-22 1.3E-26 192.6 9.3 142 297-447 26-170 (313)
240 3fhr_A MAP kinase-activated pr 99.9 9.6E-22 3.3E-26 192.1 11.8 140 298-447 27-175 (336)
241 1z57_A Dual specificity protei 99.9 6.2E-22 2.1E-26 192.7 10.3 142 298-447 13-181 (339)
242 3qa8_A MGC80376 protein; kinas 99.9 2.4E-22 8.2E-27 210.8 7.6 146 298-447 13-168 (676)
243 3uzp_A CKI-delta, CKID, casein 99.9 1.1E-21 3.9E-26 187.4 11.8 140 298-447 8-152 (296)
244 3sv0_A Casein kinase I-like; t 99.9 2.4E-21 8.2E-26 198.0 14.4 140 298-447 6-150 (483)
245 2dyl_A Dual specificity mitoge 99.9 9.8E-22 3.3E-26 189.9 10.9 143 298-447 24-169 (318)
246 1wak_A Serine/threonine-protei 99.9 6E-22 2.1E-26 197.3 9.1 136 298-440 36-184 (397)
247 2rio_A Serine/threonine-protei 99.8 8.2E-22 2.8E-26 199.3 8.4 138 302-447 18-172 (434)
248 3p23_A Serine/threonine-protei 99.8 1.6E-21 5.4E-26 197.0 8.7 138 299-447 24-167 (432)
249 1zar_A RIO2 kinase; serine kin 99.8 2.7E-21 9.1E-26 184.1 8.4 135 294-447 85-236 (282)
250 2eu9_A Dual specificity protei 99.8 4.3E-21 1.5E-25 188.0 10.1 142 298-447 18-186 (355)
251 2vx3_A Dual specificity tyrosi 99.8 5.8E-21 2E-25 189.8 11.1 145 297-447 52-205 (382)
252 1q8y_A SR protein kinase; tran 99.8 7E-21 2.4E-25 188.1 7.5 142 299-447 19-182 (373)
253 3en9_A Glycoprotease, O-sialog 99.8 1.5E-20 5.1E-25 194.8 10.0 127 303-447 340-473 (540)
254 1ogq_A PGIP-2, polygalacturona 99.8 1.5E-20 5E-25 181.8 8.8 174 36-212 125-312 (313)
255 3dzo_A Rhoptry kinase domain; 99.8 3.5E-20 1.2E-24 186.2 5.1 144 300-447 79-255 (413)
256 1zth_A RIO1 serine protein kin 99.7 7.9E-19 2.7E-23 164.9 6.4 131 301-447 49-213 (258)
257 3rgz_A Protein brassinosteroid 99.7 1.4E-18 4.7E-23 188.1 8.0 151 50-200 481-714 (768)
258 1ogq_A PGIP-2, polygalacturona 99.7 3.9E-18 1.3E-22 164.7 5.3 175 23-201 39-232 (313)
259 4fcg_A Uncharacterized protein 99.7 7.5E-18 2.6E-22 163.9 5.9 166 34-201 102-288 (328)
260 3rfs_A Internalin B, repeat mo 99.7 4.3E-17 1.5E-21 154.2 10.8 150 55-204 59-219 (272)
261 3m19_A Variable lymphocyte rec 99.7 4.9E-17 1.7E-21 151.9 11.1 130 75-204 63-193 (251)
262 4fcg_A Uncharacterized protein 99.7 1.5E-17 5.1E-22 161.8 5.7 161 38-201 83-264 (328)
263 4gyi_A RIO2 kinase; protein ki 99.7 6.2E-18 2.1E-22 165.8 2.7 134 301-449 97-261 (397)
264 1p9a_G Platelet glycoprotein I 99.7 2.5E-16 8.4E-21 150.4 13.1 165 39-204 34-209 (290)
265 2v70_A SLIT-2, SLIT homolog 2 99.7 2E-16 7E-21 144.7 11.2 130 75-204 36-167 (220)
266 1w8a_A SLIT protein; signaling 99.7 5.4E-17 1.8E-21 145.3 6.5 110 75-184 33-143 (192)
267 4eco_A Uncharacterized protein 99.7 3.7E-17 1.2E-21 173.1 5.5 112 87-199 239-362 (636)
268 2v9t_B SLIT homolog 2 protein 99.7 5.4E-16 1.9E-20 141.9 12.0 130 75-204 36-166 (220)
269 2z66_A Variable lymphocyte rec 99.7 1.2E-16 4.1E-21 153.5 8.0 167 34-200 50-233 (306)
270 1ozn_A Reticulon 4 receptor; N 99.7 8E-17 2.7E-21 153.2 6.5 164 37-200 33-211 (285)
271 2o6q_A Variable lymphocyte rec 99.6 4.3E-16 1.5E-20 147.0 11.0 124 76-200 66-191 (270)
272 2v70_A SLIT-2, SLIT homolog 2 99.6 3.5E-16 1.2E-20 143.1 9.6 125 60-184 33-170 (220)
273 3vq2_A TLR4, TOLL-like recepto 99.6 1.5E-16 5.1E-21 167.4 7.1 170 36-205 376-560 (606)
274 3rfs_A Internalin B, repeat mo 99.6 5.3E-16 1.8E-20 146.6 9.5 152 33-185 60-223 (272)
275 3e6j_A Variable lymphocyte rec 99.6 2.7E-15 9.2E-20 138.1 13.2 129 75-204 44-173 (229)
276 3oja_A Leucine-rich immune mol 99.6 1.3E-16 4.3E-21 163.6 4.8 162 33-200 55-224 (487)
277 3v47_A TOLL-like receptor 5B a 99.6 1.2E-15 4.1E-20 154.7 11.7 133 73-205 277-410 (455)
278 2v9t_B SLIT homolog 2 protein 99.6 1.9E-15 6.4E-20 138.3 10.6 124 59-182 32-167 (220)
279 1w8a_A SLIT protein; signaling 99.6 2.5E-15 8.5E-20 134.4 10.8 126 76-204 13-140 (192)
280 3m19_A Variable lymphocyte rec 99.6 4.4E-15 1.5E-19 138.5 12.7 128 74-201 38-166 (251)
281 2o6s_A Variable lymphocyte rec 99.6 7.1E-15 2.4E-19 133.0 13.6 129 76-204 33-162 (208)
282 4ecn_A Leucine-rich repeat pro 99.6 5.4E-16 1.9E-20 168.3 6.6 118 81-200 435-583 (876)
283 3zyj_A Leucine-rich repeat-con 99.6 1.2E-15 4.3E-20 154.2 7.9 128 77-206 166-295 (440)
284 2wfh_A SLIT homolog 2 protein 99.6 8E-15 2.7E-19 131.2 12.3 115 87-204 25-140 (193)
285 2wfh_A SLIT homolog 2 protein 99.6 2.5E-15 8.4E-20 134.6 8.5 107 75-182 35-141 (193)
286 1ozn_A Reticulon 4 receptor; N 99.6 5.6E-15 1.9E-19 140.4 10.8 144 58-201 31-188 (285)
287 2z62_A TOLL-like receptor 4, v 99.6 3.3E-15 1.1E-19 141.2 9.1 163 38-200 30-210 (276)
288 2o6s_A Variable lymphocyte rec 99.6 3.7E-15 1.3E-19 134.8 9.0 111 75-185 56-166 (208)
289 3e6j_A Variable lymphocyte rec 99.6 5.9E-15 2E-19 135.8 10.4 125 59-184 40-176 (229)
290 4ezg_A Putative uncharacterize 99.6 1E-15 3.6E-20 137.4 5.1 122 76-201 71-192 (197)
291 3zyi_A Leucine-rich repeat-con 99.6 2.1E-15 7.3E-20 153.0 7.7 115 90-206 191-306 (452)
292 1p9a_G Platelet glycoprotein I 99.6 4.9E-15 1.7E-19 141.4 9.7 150 47-201 21-183 (290)
293 2z66_A Variable lymphocyte rec 99.6 2E-15 6.9E-20 144.9 6.8 181 20-201 7-210 (306)
294 2z62_A TOLL-like receptor 4, v 99.6 4E-15 1.4E-19 140.7 7.8 172 33-205 49-239 (276)
295 2je0_A Acidic leucine-rich nuc 99.6 4.5E-15 1.5E-19 126.8 7.3 109 74-184 20-130 (149)
296 3g39_A Variable lymphocyte rec 99.5 1.8E-14 6.1E-19 126.2 10.8 107 76-185 14-120 (170)
297 1dce_A Protein (RAB geranylger 99.5 5.3E-15 1.8E-19 154.0 8.7 107 75-186 445-552 (567)
298 2r9u_A Variable lymphocyte rec 99.5 2.1E-14 7.2E-19 126.3 11.1 108 75-185 16-123 (174)
299 2z63_A TOLL-like receptor 4, v 99.5 5.5E-15 1.9E-19 154.0 8.5 170 35-204 346-532 (570)
300 2ell_A Acidic leucine-rich nuc 99.5 7.3E-15 2.5E-19 128.2 7.6 125 74-200 27-157 (168)
301 2o6q_A Variable lymphocyte rec 99.5 9.2E-15 3.2E-19 137.9 8.6 168 38-205 39-220 (270)
302 3t6q_A CD180 antigen; protein- 99.5 3.3E-15 1.1E-19 157.1 5.8 151 34-184 348-517 (606)
303 2o6r_A Variable lymphocyte rec 99.5 2.5E-14 8.6E-19 125.9 10.3 111 75-185 32-142 (177)
304 2o6r_A Variable lymphocyte rec 99.5 7E-14 2.4E-18 123.0 13.0 126 76-204 12-138 (177)
305 1wwl_A Monocyte differentiatio 99.5 1.2E-15 4E-20 147.2 1.6 166 34-201 93-285 (312)
306 4eco_A Uncharacterized protein 99.5 9E-16 3.1E-20 162.5 0.7 151 48-201 195-388 (636)
307 3o53_A Protein LRIM1, AGAP0063 99.5 3.4E-15 1.2E-19 144.2 4.7 161 34-200 56-224 (317)
308 4g8a_A TOLL-like receptor 4; l 99.5 1E-14 3.5E-19 153.5 8.7 154 52-205 413-582 (635)
309 2z63_A TOLL-like receptor 4, v 99.5 5.8E-15 2E-19 153.8 6.7 154 33-186 370-537 (570)
310 3vq2_A TLR4, TOLL-like recepto 99.5 6.8E-15 2.3E-19 154.6 5.9 149 52-200 369-531 (606)
311 2xot_A Amphoterin-induced prot 99.5 1.7E-14 5.8E-19 142.0 8.0 156 48-205 30-204 (361)
312 3v47_A TOLL-like receptor 5B a 99.5 5E-14 1.7E-18 142.6 11.0 130 59-188 275-416 (455)
313 1xku_A Decorin; proteoglycan, 99.5 2E-14 6.8E-19 139.5 7.7 164 34-200 74-250 (330)
314 2ft3_A Biglycan; proteoglycan, 99.5 2.3E-14 8E-19 139.2 8.2 142 55-200 98-251 (332)
315 3j0a_A TOLL-like receptor 5; m 99.5 8.5E-15 2.9E-19 160.0 5.2 89 113-205 474-562 (844)
316 3oja_B Anopheles plasmodium-re 99.5 1.4E-14 4.6E-19 152.3 6.2 124 76-205 237-360 (597)
317 4ecn_A Leucine-rich repeat pro 99.5 4.1E-15 1.4E-19 161.4 2.3 151 49-201 438-606 (876)
318 3oja_B Anopheles plasmodium-re 99.5 2.7E-14 9.3E-19 150.0 8.5 110 47-156 62-184 (597)
319 2xot_A Amphoterin-induced prot 99.5 5.3E-14 1.8E-18 138.4 9.8 127 74-200 42-173 (361)
320 1wwl_A Monocyte differentiatio 99.5 1.7E-14 5.7E-19 139.1 5.6 163 34-200 41-238 (312)
321 2ft3_A Biglycan; proteoglycan, 99.5 3E-14 1E-18 138.4 7.3 161 34-200 100-274 (332)
322 4b8c_D Glucose-repressible alc 99.5 1.8E-14 6.3E-19 154.4 6.1 107 75-185 228-334 (727)
323 2id5_A Lingo-1, leucine rich r 99.5 1.4E-14 4.7E-19 147.9 4.5 151 55-205 172-335 (477)
324 3zyj_A Leucine-rich repeat-con 99.5 7.1E-14 2.4E-18 141.2 9.8 141 59-200 64-217 (440)
325 2ell_A Acidic leucine-rich nuc 99.5 3.2E-14 1.1E-18 124.1 6.1 104 76-182 54-162 (168)
326 4g8a_A TOLL-like receptor 4; l 99.5 7.6E-14 2.6E-18 146.9 10.0 109 76-184 81-190 (635)
327 2id5_A Lingo-1, leucine rich r 99.5 8.2E-14 2.8E-18 142.1 9.7 161 39-199 35-209 (477)
328 3o6n_A APL1; leucine-rich repe 99.5 3.2E-14 1.1E-18 141.4 6.1 122 77-204 232-353 (390)
329 1h6t_A Internalin B; cell adhe 99.5 5.3E-14 1.8E-18 134.2 7.2 153 38-200 48-210 (291)
330 2xwt_C Thyrotropin receptor; s 99.5 2E-14 6.7E-19 133.0 4.0 161 38-201 33-216 (239)
331 1h6u_A Internalin H; cell adhe 99.5 5.2E-14 1.8E-18 135.4 6.8 144 47-200 52-205 (308)
332 4b8c_D Glucose-repressible alc 99.5 7.8E-15 2.7E-19 157.3 1.0 131 53-186 218-360 (727)
333 2je0_A Acidic leucine-rich nuc 99.5 1.1E-14 3.7E-19 124.4 1.6 99 76-176 47-149 (149)
334 2z80_A TOLL-like receptor 2, v 99.5 6E-15 2.1E-19 144.6 -0.1 150 33-184 73-239 (353)
335 1ziw_A TOLL-like receptor 3; i 99.4 4.1E-14 1.4E-18 150.8 6.1 167 34-200 403-594 (680)
336 3t6q_A CD180 antigen; protein- 99.4 1.3E-13 4.6E-18 144.7 9.8 162 38-199 35-211 (606)
337 1xku_A Decorin; proteoglycan, 99.4 9.4E-14 3.2E-18 134.7 7.9 164 37-204 122-307 (330)
338 1m9s_A Internalin B; cell inva 99.4 7.9E-14 2.7E-18 146.1 7.7 157 35-201 42-208 (605)
339 2z7x_B TOLL-like receptor 1, v 99.4 5.2E-14 1.8E-18 145.2 6.2 129 54-184 215-391 (520)
340 2z7x_B TOLL-like receptor 1, v 99.4 1.9E-13 6.4E-18 141.0 10.0 164 33-200 273-454 (520)
341 3o6n_A APL1; leucine-rich repe 99.4 1.4E-13 4.8E-18 136.7 8.6 164 37-200 46-282 (390)
342 3j0a_A TOLL-like receptor 5; m 99.4 1.3E-13 4.4E-18 150.6 8.5 148 38-185 26-192 (844)
343 1dce_A Protein (RAB geranylger 99.4 1.9E-14 6.4E-19 149.9 1.5 151 40-201 353-544 (567)
344 3oja_A Leucine-rich immune mol 99.4 3.7E-14 1.3E-18 145.2 3.7 155 38-201 36-202 (487)
345 3zyi_A Leucine-rich repeat-con 99.4 4.7E-13 1.6E-17 135.7 11.8 139 60-199 76-227 (452)
346 1h6u_A Internalin H; cell adhe 99.4 1.3E-13 4.6E-18 132.5 7.3 155 36-200 63-227 (308)
347 2xwt_C Thyrotropin receptor; s 99.4 8.6E-14 2.9E-18 128.6 5.0 119 60-180 32-169 (239)
348 4glp_A Monocyte differentiatio 99.4 8.9E-14 3E-18 133.8 5.2 142 59-201 91-262 (310)
349 4fmz_A Internalin; leucine ric 99.4 2.4E-13 8.2E-18 132.6 8.3 157 36-200 177-343 (347)
350 3a79_B TLR6, VLRB.59, TOLL-lik 99.4 4.2E-13 1.5E-17 139.8 10.7 140 60-201 332-484 (562)
351 4ezg_A Putative uncharacterize 99.4 2.4E-13 8.2E-18 121.8 7.6 122 75-200 48-169 (197)
352 2ifg_A High affinity nerve gro 99.4 3.9E-13 1.3E-17 131.3 9.7 103 77-182 14-118 (347)
353 4glp_A Monocyte differentiatio 99.4 3.8E-14 1.3E-18 136.4 2.0 161 38-201 93-283 (310)
354 2z80_A TOLL-like receptor 2, v 99.4 2.1E-13 7.3E-18 133.5 7.3 117 47-177 42-159 (353)
355 1xeu_A Internalin C; cellular 99.4 2.9E-13 1E-17 127.1 7.8 139 55-203 37-185 (263)
356 2z81_A CD282 antigen, TOLL-lik 99.4 1.7E-13 5.9E-18 142.1 6.8 127 59-185 26-166 (549)
357 3a79_B TLR6, VLRB.59, TOLL-lik 99.4 1.9E-13 6.6E-18 142.4 6.8 146 57-205 351-512 (562)
358 3g39_A Variable lymphocyte rec 99.4 1.2E-12 4.1E-17 114.5 10.7 106 97-205 11-117 (170)
359 2r9u_A Variable lymphocyte rec 99.4 1.3E-12 4.4E-17 114.8 10.7 105 97-204 14-119 (174)
360 1ziw_A TOLL-like receptor 3; i 99.4 2.8E-13 9.7E-18 144.3 7.7 147 55-201 349-515 (680)
361 2z81_A CD282 antigen, TOLL-lik 99.4 5.7E-13 1.9E-17 138.2 8.1 128 73-200 28-158 (549)
362 1a9n_A U2A', U2A'; complex (nu 99.4 6.2E-13 2.1E-17 116.9 7.1 104 74-182 22-128 (176)
363 1m9s_A Internalin B; cell inva 99.4 6.7E-13 2.3E-17 139.0 8.2 143 33-184 62-214 (605)
364 1h6t_A Internalin B; cell adhe 99.3 3.1E-12 1.1E-16 121.9 11.3 136 56-200 43-188 (291)
365 3cvr_A Invasion plasmid antige 99.3 5.9E-13 2E-17 138.2 6.6 68 77-156 126-193 (571)
366 1a9n_A U2A', U2A'; complex (nu 99.3 4.8E-13 1.6E-17 117.6 4.5 102 76-181 47-154 (176)
367 1o6v_A Internalin A; bacterial 99.3 1.1E-12 3.8E-17 133.4 7.8 157 34-200 175-341 (466)
368 3cvr_A Invasion plasmid antige 99.3 4.3E-13 1.5E-17 139.2 4.5 137 33-185 97-248 (571)
369 1o6v_A Internalin A; bacterial 99.3 1.1E-12 3.7E-17 133.5 7.1 156 35-200 198-363 (466)
370 3bz5_A Internalin-J, INLJ; leu 99.3 1.7E-12 5.7E-17 131.8 8.3 140 32-184 102-250 (457)
371 3o53_A Protein LRIM1, AGAP0063 99.3 7.2E-13 2.4E-17 127.9 4.3 155 37-200 35-201 (317)
372 1xeu_A Internalin C; cellular 99.3 1.4E-12 4.7E-17 122.5 6.0 134 58-201 18-161 (263)
373 4fmz_A Internalin; leucine ric 99.3 1.9E-12 6.5E-17 126.2 6.5 138 36-180 199-346 (347)
374 3bz5_A Internalin-J, INLJ; leu 99.3 4.4E-12 1.5E-16 128.7 8.5 155 32-201 81-244 (457)
375 2ifg_A High affinity nerve gro 99.3 7.6E-12 2.6E-16 122.1 9.6 110 93-205 7-118 (347)
376 2ca6_A RAN GTPase-activating p 99.3 1.1E-13 3.8E-18 137.3 -4.4 91 91-181 183-288 (386)
377 1ds9_A Outer arm dynein; leuci 99.3 5.5E-14 1.9E-18 126.1 -6.2 87 90-181 43-129 (198)
378 1jl5_A Outer protein YOPM; leu 99.3 1.2E-11 4.2E-16 125.3 10.0 153 30-197 25-202 (454)
379 1jl5_A Outer protein YOPM; leu 99.2 9.3E-12 3.2E-16 126.2 8.7 129 59-200 111-247 (454)
380 1ds9_A Outer arm dynein; leuci 99.2 1.1E-13 3.7E-18 124.2 -5.1 106 75-185 52-158 (198)
381 3tm0_A Aminoglycoside 3'-phosp 99.2 2.2E-11 7.6E-16 113.9 9.5 141 296-447 11-208 (263)
382 3g06_A SSPH2 (leucine-rich rep 99.2 1.5E-11 5E-16 129.1 5.0 81 95-184 221-301 (622)
383 2ca6_A RAN GTPase-activating p 99.1 4.9E-12 1.7E-16 125.4 0.9 126 59-184 159-320 (386)
384 2ast_B S-phase kinase-associat 99.1 2.3E-12 7.7E-17 125.0 -1.5 127 75-201 122-258 (336)
385 4ay9_X Follicle-stimulating ho 99.1 2.8E-11 9.7E-16 118.3 6.0 158 37-197 31-230 (350)
386 2ast_B S-phase kinase-associat 99.1 2E-12 6.7E-17 125.4 -2.8 143 59-201 70-233 (336)
387 3g06_A SSPH2 (leucine-rich rep 99.1 3.8E-11 1.3E-15 126.0 6.7 75 119-201 221-295 (622)
388 1nd4_A Aminoglycoside 3'-phosp 99.1 1.5E-10 5.3E-15 107.6 7.0 124 308-447 29-209 (264)
389 3dxp_A Putative acyl-COA dehyd 99.0 7.9E-10 2.7E-14 108.3 10.0 137 304-447 43-243 (359)
390 3goz_A Leucine-rich repeat-con 99.0 9.4E-11 3.2E-15 115.1 3.1 107 75-181 26-152 (362)
391 3goz_A Leucine-rich repeat-con 99.0 2.3E-10 7.9E-15 112.3 3.7 111 74-184 54-184 (362)
392 1z7x_W Ribonuclease inhibitor; 98.9 1.3E-11 4.3E-16 125.1 -7.0 89 93-181 254-355 (461)
393 4ay9_X Follicle-stimulating ho 98.9 1.1E-09 3.7E-14 107.0 6.4 86 91-176 50-137 (350)
394 1z7x_W Ribonuclease inhibitor; 98.8 3.7E-10 1.3E-14 114.2 0.2 132 50-181 47-213 (461)
395 3un9_A NLR family member X1; l 98.7 1.7E-09 5.8E-14 106.5 1.3 109 73-181 103-225 (372)
396 3rw6_A Nuclear RNA export fact 98.6 8.3E-09 2.8E-13 96.2 3.0 80 92-173 167-257 (267)
397 3un9_A NLR family member X1; l 98.6 7.1E-09 2.4E-13 102.1 -0.1 123 59-181 101-253 (372)
398 3rw6_A Nuclear RNA export fact 98.5 1.3E-08 4.6E-13 94.8 -1.2 84 100-185 148-238 (267)
399 3r70_A Aminoglycoside phosphot 98.4 8.3E-07 2.8E-11 85.3 9.6 131 300-447 38-232 (320)
400 3d1u_A Putative fructosamine-3 98.4 1.6E-06 5.5E-11 82.0 10.9 76 303-383 19-97 (288)
401 3sg8_A APH(2'')-ID; antibiotic 98.3 6.6E-07 2.3E-11 85.2 7.0 131 304-447 25-218 (304)
402 1io0_A Tropomodulin; LRR prote 98.3 1E-07 3.4E-12 84.2 0.3 94 87-180 57-164 (185)
403 3sb4_A Hypothetical leucine ri 98.3 7.2E-07 2.5E-11 86.0 6.1 74 58-132 48-137 (329)
404 3ogk_B Coronatine-insensitive 98.1 6.6E-07 2.3E-11 93.2 2.8 89 91-181 216-307 (592)
405 2ra8_A Uncharacterized protein 98.1 5.4E-07 1.9E-11 88.0 0.3 20 50-69 163-182 (362)
406 3ogk_B Coronatine-insensitive 98.1 5.5E-07 1.9E-11 93.8 0.4 120 54-175 187-326 (592)
407 4gkh_A Aminoglycoside 3'-phosp 98.0 1.5E-05 5.2E-10 74.2 9.7 129 307-447 32-218 (272)
408 3tdw_A Gentamicin resistance p 98.0 1.4E-05 4.7E-10 76.2 9.6 75 304-385 24-102 (306)
409 1io0_A Tropomodulin; LRR prote 98.0 1.5E-06 5.2E-11 76.5 2.1 94 88-181 29-137 (185)
410 3sb4_A Hypothetical leucine ri 98.0 9.6E-06 3.3E-10 78.0 7.3 88 94-183 225-313 (329)
411 3ats_A Putative uncharacterize 97.9 1.5E-05 5.1E-10 77.5 7.2 80 305-384 26-121 (357)
412 3ovc_A Hygromycin-B 4-O-kinase 97.9 3E-05 1E-09 75.7 8.6 73 304-383 46-121 (362)
413 2p1m_B Transport inhibitor res 97.8 4E-07 1.4E-11 94.8 -5.7 104 77-181 378-495 (594)
414 2p1m_B Transport inhibitor res 97.8 8.6E-07 3E-11 92.3 -4.0 89 91-180 428-519 (594)
415 2q83_A YTAA protein; 2635576, 97.8 6.9E-05 2.4E-09 72.0 9.4 137 305-447 38-247 (346)
416 2olc_A MTR kinase, methylthior 97.8 8.3E-05 2.8E-09 73.4 9.8 76 304-381 35-120 (397)
417 3f7w_A Putative fructosamine-3 97.7 0.00019 6.5E-09 67.5 10.3 77 301-382 17-96 (288)
418 3jr1_A Putative fructosamine-3 97.6 0.0002 6.7E-09 68.3 9.7 138 304-447 41-231 (312)
419 3e4g_A ATP synthase subunit S, 97.5 3.9E-05 1.3E-09 66.4 2.2 92 87-178 53-150 (176)
420 2ra8_A Uncharacterized protein 97.3 4E-05 1.4E-09 74.8 0.9 40 142-181 251-293 (362)
421 2pyw_A Uncharacterized protein 97.2 0.0013 4.4E-08 65.4 10.0 74 304-380 39-122 (420)
422 3rfe_A Platelet glycoprotein I 97.1 0.00069 2.3E-08 55.6 6.3 55 99-155 12-67 (130)
423 4fdw_A Leucine rich hypothetic 97.1 0.00093 3.2E-08 66.0 8.1 81 95-177 248-333 (401)
424 3rfe_A Platelet glycoprotein I 97.1 0.00074 2.5E-08 55.4 5.9 57 122-180 11-68 (130)
425 4fdw_A Leucine rich hypothetic 97.0 0.0022 7.6E-08 63.3 9.4 63 89-153 174-236 (401)
426 1pgv_A TMD-1, tropomodulin TMD 96.7 0.00043 1.5E-08 60.9 1.2 90 89-178 64-168 (197)
427 3dxq_A Choline/ethanolamine ki 96.5 0.0047 1.6E-07 58.2 7.4 71 304-383 23-95 (301)
428 3csv_A Aminoglycoside phosphot 96.5 0.0066 2.3E-07 58.0 8.5 76 305-386 24-102 (333)
429 3e4g_A ATP synthase subunit S, 96.4 0.00079 2.7E-08 58.1 1.3 85 71-155 61-151 (176)
430 1nw1_A Choline kinase (49.2 KD 96.3 0.006 2.1E-07 60.7 7.3 71 305-382 79-158 (429)
431 1pgv_A TMD-1, tropomodulin TMD 96.3 0.0012 3.9E-08 58.2 1.7 87 91-177 37-136 (197)
432 1zyl_A Hypothetical protein YI 96.3 0.023 8E-07 53.9 11.1 75 305-382 32-113 (328)
433 3feg_A Choline/ethanolamine ki 96.1 0.013 4.5E-07 57.1 8.3 137 305-447 56-249 (379)
434 2ppq_A HSK, HK, homoserine kin 96.1 0.018 6.2E-07 54.5 9.2 139 305-447 28-212 (322)
435 3c5i_A Choline kinase; choline 95.6 0.013 4.5E-07 56.8 5.9 72 305-382 39-120 (369)
436 2qg7_A Ethanolamine kinase PV0 95.2 0.056 1.9E-06 54.1 8.9 73 305-383 114-188 (458)
437 4gt6_A Cell surface protein; l 94.8 0.068 2.3E-06 52.2 8.2 83 91-176 261-343 (394)
438 4fs7_A Uncharacterized protein 94.6 0.036 1.2E-06 54.2 5.7 82 91-177 272-353 (394)
439 3i1a_A Spectinomycin phosphotr 94.3 0.13 4.3E-06 49.2 8.8 27 421-447 205-231 (339)
440 4h09_A Hypothetical leucine ri 94.3 0.093 3.2E-06 50.8 7.9 85 91-177 236-320 (379)
441 4h09_A Hypothetical leucine ri 93.2 0.31 1.1E-05 47.0 9.4 87 91-180 213-299 (379)
442 4gt6_A Cell surface protein; l 93.1 0.1 3.4E-06 50.9 5.6 88 90-180 283-370 (394)
443 3f2s_A CK, chetk-alpha, cholin 92.8 0.21 7.1E-06 48.9 7.4 26 422-447 244-275 (401)
444 4fs7_A Uncharacterized protein 92.3 0.63 2.2E-05 45.2 10.2 35 93-128 69-103 (394)
445 3cxl_A N-chimerin; SH2, RHO-GA 90.2 0.045 1.6E-06 54.9 -0.6 61 304-367 147-215 (463)
446 3mes_A Choline kinase; malaria 90.0 0.46 1.6E-05 46.8 6.5 73 305-383 76-157 (424)
447 2ks1_B Epidermal growth factor 88.3 0.51 1.7E-05 30.1 3.5 29 238-266 12-40 (44)
448 2l2t_A Receptor tyrosine-prote 84.8 0.76 2.6E-05 29.2 2.9 30 238-267 11-40 (44)
449 4ann_A ESSB; membrane protein, 80.4 3.4 0.00012 36.3 6.5 81 353-446 42-122 (215)
450 4ano_A ESSB; membrane protein, 78.4 6.4 0.00022 34.7 7.7 78 354-445 48-126 (219)
451 2jwa_A Receptor tyrosine-prote 59.8 5.1 0.00017 25.4 2.0 25 241-265 15-39 (44)
452 2k9y_A Ephrin type-A receptor 56.4 8.6 0.00029 23.8 2.7 8 256-263 32-39 (41)
453 3g15_A CK, chetk-alpha, cholin 42.5 7.9 0.00027 37.5 1.3 24 424-447 246-275 (401)
454 2k1k_A Ephrin type-A receptor 42.4 17 0.00058 22.2 2.3 23 241-263 14-37 (38)
455 2l9u_A Receptor tyrosine-prote 21.0 26 0.00089 20.6 0.4 24 242-265 11-34 (40)
No 1
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=2.6e-33 Score=268.75 Aligned_cols=145 Identities=28% Similarity=0.477 Sum_probs=125.9
Q ss_pred cCCCCCCccCccCCceEEEEEeC------CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeee
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA------DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKL 372 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~------~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 372 (451)
++|...+.||+|+||+||+|++. +++.||||+++... .....+|.+|+.+|++++|||||+++|+|.+.+..+
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~ 91 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS-DNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLI 91 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCC-HHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCC-hHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEE
Confidence 45677789999999999999864 36789999996532 233457999999999999999999999999999999
Q ss_pred EEEecCCCCChhHHhhccC---------CCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCcc
Q 013004 373 LVYPYMTNGSVASRLRERQ---------SSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQS 443 (451)
Q Consensus 373 lv~ey~~~gsL~~~l~~~~---------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~ 443 (451)
+|||||++|+|.++++... .....++|.++..++.|||+||+|||++ +||||||||+|||+|+++.+|
T Consensus 92 lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~~~~K 168 (299)
T 4asz_A 92 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVK 168 (299)
T ss_dssp EEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEE
T ss_pred EEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCCCcEE
Confidence 9999999999999997642 2234699999999999999999999998 999999999999999999999
Q ss_pred chhh
Q 013004 444 SKTI 447 (451)
Q Consensus 444 i~df 447 (451)
|+||
T Consensus 169 i~DF 172 (299)
T 4asz_A 169 IGDF 172 (299)
T ss_dssp ECCC
T ss_pred ECCc
Confidence 9998
No 2
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=3.8e-33 Score=268.78 Aligned_cols=144 Identities=26% Similarity=0.420 Sum_probs=126.0
Q ss_pred CCCCCccCccCCceEEEEEeC------CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEE
Q 013004 301 FSNKNILGRGGFGKVYKGRLA------DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLV 374 (451)
Q Consensus 301 f~~~~~lG~G~fg~Vy~~~~~------~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 374 (451)
++..+.||+|+||+||+|++. +++.||||+++.........+|.+|+.++++++|||||+++|+|.+.+..++|
T Consensus 28 ~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV 107 (308)
T 4gt4_A 28 VRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMI 107 (308)
T ss_dssp EEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred CeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEEE
Confidence 445678999999999999863 46789999997655444456899999999999999999999999999999999
Q ss_pred EecCCCCChhHHhhccCC------------CCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCc
Q 013004 375 YPYMTNGSVASRLRERQS------------SLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQ 442 (451)
Q Consensus 375 ~ey~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~ 442 (451)
||||++|+|.++|+.... ....++|.++..|+.|||+||+|||++ +||||||||+|||+|+++.+
T Consensus 108 ~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NILl~~~~~~ 184 (308)
T 4gt4_A 108 FSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNV 184 (308)
T ss_dssp EECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCE
T ss_pred EEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceEECCCCCE
Confidence 999999999999975421 123589999999999999999999999 99999999999999999999
Q ss_pred cchhh
Q 013004 443 SSKTI 447 (451)
Q Consensus 443 ~i~df 447 (451)
||+||
T Consensus 185 Ki~DF 189 (308)
T 4gt4_A 185 KISDL 189 (308)
T ss_dssp EECCS
T ss_pred EECCc
Confidence 99998
No 3
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=99.98 E-value=9.4e-33 Score=268.48 Aligned_cols=145 Identities=31% Similarity=0.493 Sum_probs=127.3
Q ss_pred cCCCCCCccCccCCceEEEEEeC------CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeee
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA------DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKL 372 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~------~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 372 (451)
++|...+.||+|+||+||+|+++ +++.||||+++... .....+|.+|+.+|++++|||||+++|+|.+.+..+
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~ 119 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS-ESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLL 119 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCS-HHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCC-HHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEE
Confidence 45566788999999999999874 47789999996532 233457999999999999999999999999999999
Q ss_pred EEEecCCCCChhHHhhccCC-----------CCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCC
Q 013004 373 LVYPYMTNGSVASRLRERQS-----------SLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDAD 441 (451)
Q Consensus 373 lv~ey~~~gsL~~~l~~~~~-----------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~ 441 (451)
+|||||++|+|.++++.... ...+++|.++..|+.|||+||+|||+. +||||||||+|||+|+++.
T Consensus 120 lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~~~~~ 196 (329)
T 4aoj_A 120 MVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQGLV 196 (329)
T ss_dssp EEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTE
T ss_pred EEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEECCCCc
Confidence 99999999999999986432 123589999999999999999999998 9999999999999999999
Q ss_pred ccchhh
Q 013004 442 QSSKTI 447 (451)
Q Consensus 442 ~~i~df 447 (451)
+||+||
T Consensus 197 ~Ki~DF 202 (329)
T 4aoj_A 197 VKIGDF 202 (329)
T ss_dssp EEECCC
T ss_pred EEEccc
Confidence 999998
No 4
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=99.97 E-value=2.9e-32 Score=265.68 Aligned_cols=144 Identities=21% Similarity=0.327 Sum_probs=123.3
Q ss_pred cCCCCCCccCccCCceEEEEEe-CCCCEEEEEEccccccc-ccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEe
Q 013004 299 DGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTS-GGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 376 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 376 (451)
++|+..+.||+|+||+||+|+. .+|+.||||+++..... .....+.+|+.+++.++|||||++++++.+.+..|+|||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE 103 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence 5788889999999999999986 46899999999654322 234479999999999999999999999999999999999
Q ss_pred cCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 377 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 377 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
||++|+|.+++..... ..+++.++..++.||+.||+|||++ +||||||||+|||+++++.+||+||
T Consensus 104 y~~gg~L~~~i~~~~~--~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DF 169 (350)
T 4b9d_A 104 YCEGGDLFKRINAQKG--VLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDF 169 (350)
T ss_dssp CCTTCBHHHHHHHTTT--CCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECST
T ss_pred CCCCCcHHHHHHHcCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEccc
Confidence 9999999999976543 2478999999999999999999999 9999999999999999999999998
No 5
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=99.97 E-value=3.9e-32 Score=260.95 Aligned_cols=141 Identities=30% Similarity=0.438 Sum_probs=124.0
Q ss_pred hcCCCCCCccCccCCceEEEEEeCCCCEEEEEEccccccc-ccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEe
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTS-GGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 376 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 376 (451)
.+++...+.||+|+||+||+|++++ .||||+++..... .....|.+|+.++++++|||||+++|++.+ +..++|||
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmE 111 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred HHHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEE
Confidence 4567778899999999999999753 6999999754322 234579999999999999999999998865 56899999
Q ss_pred cCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 377 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 377 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
||++|+|.++++.... .++|.++..|+.|||+||+|||++ +||||||||+|||+|+++.+||+||
T Consensus 112 y~~gGsL~~~l~~~~~---~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DF 176 (307)
T 3omv_A 112 WCEGSSLYKHLHVQET---KFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDF 176 (307)
T ss_dssp CCSSCBHHHHHHTSCC---CCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCC
T ss_pred cCCCCCHHHHHhhcCC---CCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeec
Confidence 9999999999976532 489999999999999999999998 9999999999999999999999998
No 6
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=99.97 E-value=3.2e-32 Score=261.12 Aligned_cols=142 Identities=27% Similarity=0.358 Sum_probs=129.1
Q ss_pred cCCCCCCccCccCCceEEEEEe-CCCCEEEEEEccccc--ccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEE
Q 013004 299 DGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEER--TSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 375 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (451)
++|+..+.||+|+||+||+|+. .+++.||||++++.. .......+.+|+.+++.++|||||++++++.+.+..|+||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 5688889999999999999986 468999999996543 2233457899999999999999999999999999999999
Q ss_pred ecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 376 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 376 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
||+++|+|.+++.+.. .+++.++..++.|++.||+|||++ +|+||||||+|||+++++.+||+||
T Consensus 112 Ey~~gG~L~~~i~~~~----~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DF 176 (311)
T 4aw0_A 112 SYAKNGELLKYIRKIG----SFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDF 176 (311)
T ss_dssp CCCTTEEHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCC
T ss_pred ecCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEc
Confidence 9999999999998754 389999999999999999999999 9999999999999999999999998
No 7
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=99.97 E-value=9.8e-32 Score=261.55 Aligned_cols=140 Identities=25% Similarity=0.366 Sum_probs=126.9
Q ss_pred cCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEec
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 377 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey 377 (451)
+.|+..+.||+|+||+||+|+.+ +|+.||||+++.... .....+.+|+.+|+.++|||||++++++.+.+..|+||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~-~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy 152 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ-QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 152 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGC-SSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCch-hHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeC
Confidence 45777889999999999999974 699999999965432 2334688999999999999999999999999999999999
Q ss_pred CCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 378 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 378 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|++|+|.+++... .+++.++..++.|++.||+|||++ +||||||||+|||++.++.+||+||
T Consensus 153 ~~gg~L~~~l~~~-----~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DF 214 (346)
T 4fih_A 153 LEGGALTDIVTHT-----RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDF 214 (346)
T ss_dssp CTTEEHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCC
T ss_pred CCCCcHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecC
Confidence 9999999999763 389999999999999999999999 9999999999999999999999998
No 8
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.97 E-value=2.3e-31 Score=256.41 Aligned_cols=140 Identities=28% Similarity=0.402 Sum_probs=119.6
Q ss_pred CCCCCCccCccCCceEEEEEeCCCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCC----eeeEEE
Q 013004 300 GFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVT----EKLLVY 375 (451)
Q Consensus 300 ~f~~~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~----~~~lv~ 375 (451)
+|...+.||+|+||+||+|++ +|+.||||+++... .....+.+|+..+..++|||||+++++|.+.+ ..++||
T Consensus 4 ~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~--~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~ 80 (303)
T 3hmm_A 4 TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE--ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS 80 (303)
T ss_dssp GEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGG--HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred EEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccc--hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEe
Confidence 355668899999999999998 58999999986432 11223445666677889999999999998654 579999
Q ss_pred ecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcC-----CCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 376 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEH-----CDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 376 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~-----~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|||++|+|.++++.. .++|.++.+++.|+|+||+|||++ +.++||||||||+|||+|+++.+||+||
T Consensus 81 Ey~~~gsL~~~l~~~-----~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DF 152 (303)
T 3hmm_A 81 DYHEHGSLFDYLNRY-----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADL 152 (303)
T ss_dssp ECCTTCBHHHHHHHC-----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCC
T ss_pred cCCCCCcHHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeC
Confidence 999999999999764 389999999999999999999986 3568999999999999999999999998
No 9
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=99.97 E-value=2.4e-31 Score=255.35 Aligned_cols=145 Identities=21% Similarity=0.331 Sum_probs=123.4
Q ss_pred cCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCC--------
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVT-------- 369 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-------- 369 (451)
++|+..+.||+|+||+||+|+.+ +|+.||||+++..........+.+|+.+|+.++|||||++++++.+.+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 45888899999999999999864 689999999965443333457899999999999999999999987543
Q ss_pred ----eeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccch
Q 013004 370 ----EKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSK 445 (451)
Q Consensus 370 ----~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~ 445 (451)
..|+|||||++|+|.+++..... ....++..+..++.|+++||+|||++ +||||||||+|||++.++.+||+
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~-~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vKl~ 160 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCT-IEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVG 160 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCS-GGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEEC
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCC-CChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEEEc
Confidence 36899999999999999986532 23356778889999999999999999 99999999999999999999999
Q ss_pred hh
Q 013004 446 TI 447 (451)
Q Consensus 446 df 447 (451)
||
T Consensus 161 DF 162 (299)
T 4g31_A 161 DF 162 (299)
T ss_dssp CC
T ss_pred cC
Confidence 98
No 10
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=99.97 E-value=5.2e-31 Score=262.73 Aligned_cols=140 Identities=25% Similarity=0.366 Sum_probs=127.5
Q ss_pred cCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEec
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 377 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey 377 (451)
+.|+..+.||+|+||+||+|+.+ +|+.||||+++.... .....+.+|+.+|+.++|||||++++++.+.+..|+||||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~-~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy 229 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ-QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 229 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTC-SSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccch-hHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeC
Confidence 56888899999999999999974 699999999965432 2334689999999999999999999999999999999999
Q ss_pred CCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 378 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 378 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|++|+|.+++... .+++.++..++.||+.||+|||++ +||||||||+|||++.++.+||+||
T Consensus 230 ~~gG~L~~~i~~~-----~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DF 291 (423)
T 4fie_A 230 LEGGALTDIVTHT-----RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDF 291 (423)
T ss_dssp CTTEEHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCC
T ss_pred CCCCcHHHHHhcc-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecC
Confidence 9999999999754 389999999999999999999999 9999999999999999999999998
No 11
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=99.97 E-value=5.1e-31 Score=249.21 Aligned_cols=141 Identities=24% Similarity=0.421 Sum_probs=122.9
Q ss_pred cCCCCCCccCccCCceEEEEEe-CCCCEEEEEEcccccc--cccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEE
Q 013004 299 DGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERT--SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 375 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (451)
++|+..+.||+|+||+||+|+. .+|+.||||+++.... ......+.+|+.+++.++|||||++++++.+.+..|+||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 6799999999999999999986 4689999999965432 223446899999999999999999999999999999999
Q ss_pred ecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 376 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 376 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
||+ +|+|.+++.+.. .+++.++..++.|++.||+|||++ +|+||||||+|||+++++.+||+||
T Consensus 93 Ey~-~g~L~~~l~~~~----~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DF 156 (275)
T 3hyh_A 93 EYA-GNELFDYIVQRD----KMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADF 156 (275)
T ss_dssp ECC-CEEHHHHHHHSC----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCS
T ss_pred eCC-CCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeec
Confidence 999 689999998754 389999999999999999999999 9999999999999999999999998
No 12
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=99.97 E-value=1.1e-31 Score=257.36 Aligned_cols=142 Identities=27% Similarity=0.332 Sum_probs=122.2
Q ss_pred cCCCCCCccCccCCceEEEEEeC----CCCEEEEEEccccccc-ccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeE
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA----DGKLVAVKRLKEERTS-GGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLL 373 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~----~~~~vAvK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 373 (451)
++|+..+.||+|+||+||+|+.. +++.||||+++..... .....+.+|+.+++.++|||||++++++.+.+..|+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 46888999999999999999862 4789999999654322 223368899999999999999999999999999999
Q ss_pred EEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 374 VYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 374 v~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|||||++|+|.+++.+.. .+++.++..++.|++.||+|||++ +|+||||||+|||+++++.+||+||
T Consensus 104 vmEy~~gg~L~~~l~~~~----~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DF 170 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKEV----MFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDF 170 (304)
T ss_dssp EECCCTTCEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESS
T ss_pred EEEcCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEeccc
Confidence 999999999999998754 389999999999999999999999 9999999999999999999999998
No 13
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=99.97 E-value=7.8e-31 Score=250.01 Aligned_cols=140 Identities=26% Similarity=0.405 Sum_probs=120.6
Q ss_pred CCCccCccCCceEEEEEeC-CCCEEEEEEccccccc-ccHHHHHHHHHHHhcCCCCCccceeeEEec----CCeeeEEEe
Q 013004 303 NKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS-GGELQFQTEVKIISMAVHRNLLRLYGFCTT----VTEKLLVYP 376 (451)
Q Consensus 303 ~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~----~~~~~lv~e 376 (451)
..+.||+|+||+||+|++. +++.||||++...... .....|.+|+.+++.++|||||++++++.+ ....|+|||
T Consensus 30 ~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvmE 109 (290)
T 3fpq_A 30 FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTE 109 (290)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEEE
T ss_pred eeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEEe
Confidence 3467999999999999874 5889999998654322 233479999999999999999999999865 345799999
Q ss_pred cCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCC-CCCccchhh
Q 013004 377 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDE-DADQSSKTI 447 (451)
Q Consensus 377 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~-~~~~~i~df 447 (451)
||++|+|.+++.+.. .+++..+..++.||+.||+|||++ +++||||||||+|||+++ ++.+||+||
T Consensus 110 y~~gg~L~~~l~~~~----~l~~~~~~~~~~qi~~aL~ylH~~-~~~IiHRDlKp~NILl~~~~g~vKl~DF 176 (290)
T 3fpq_A 110 LMTSGTLKTYLKRFK----VMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDL 176 (290)
T ss_dssp CCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCCCCCGGGEEESSTTSCEEECCT
T ss_pred CCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC-CCCEEecccChhheeEECCCCCEEEEeC
Confidence 999999999998753 389999999999999999999998 334999999999999985 789999998
No 14
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=99.97 E-value=5e-31 Score=255.76 Aligned_cols=136 Identities=24% Similarity=0.301 Sum_probs=123.0
Q ss_pred cCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEec
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 377 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey 377 (451)
++|+..+.||+|+||+||+|+.+ +|+.||||+++... .+.+|+.+++.++|||||++++++.+.+..|+||||
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~------~~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy 131 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEV------FRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMEL 131 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT------CCTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHH------hHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEec
Confidence 45667788999999999999974 68999999996532 135799999999999999999999999999999999
Q ss_pred CCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCC-Cccchhh
Q 013004 378 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDA-DQSSKTI 447 (451)
Q Consensus 378 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~-~~~i~df 447 (451)
|++|+|.++++... .+++.++..++.|++.||+|||++ +||||||||+|||++.++ .+||+||
T Consensus 132 ~~gg~L~~~l~~~~----~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DF 195 (336)
T 4g3f_A 132 LEGGSLGQLIKQMG----CLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDF 195 (336)
T ss_dssp CTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCC
T ss_pred cCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeC
Confidence 99999999998754 389999999999999999999999 999999999999999998 5999998
No 15
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=99.97 E-value=3.7e-31 Score=259.40 Aligned_cols=154 Identities=28% Similarity=0.384 Sum_probs=131.7
Q ss_pred HHHHHHHhcCCCCCCccCccCCceEEEEEeCC------CCEEEEEEcccccccccHHHHHHHHHHHhcCCC-CCccceee
Q 013004 291 LRELQVATDGFSNKNILGRGGFGKVYKGRLAD------GKLVAVKRLKEERTSGGELQFQTEVKIISMAVH-RNLLRLYG 363 (451)
Q Consensus 291 ~~~~~~~~~~f~~~~~lG~G~fg~Vy~~~~~~------~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H-~niv~l~~ 363 (451)
..+++...++|+..+.||+|+||+||+|++.. ++.||||+++.........+|.+|+.+|..++| ||||+++|
T Consensus 56 ~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g 135 (353)
T 4ase_A 56 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG 135 (353)
T ss_dssp HHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred CcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEE
Confidence 34555667889999999999999999998632 368999999765544445579999999999975 89999999
Q ss_pred EEecC-CeeeEEEecCCCCChhHHhhccCC------------CCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCC
Q 013004 364 FCTTV-TEKLLVYPYMTNGSVASRLRERQS------------SLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVK 430 (451)
Q Consensus 364 ~~~~~-~~~~lv~ey~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK 430 (451)
+|.+. +..++|||||++|+|.++|+.... ....++|.++..++.|||+||+|||++ +|||||||
T Consensus 136 ~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHRDLK 212 (353)
T 4ase_A 136 ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLA 212 (353)
T ss_dssp EECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCS
T ss_pred EEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecCccC
Confidence 99764 568999999999999999986421 123589999999999999999999999 99999999
Q ss_pred CCceeeCCCCCccchhh
Q 013004 431 AANILLDEDADQSSKTI 447 (451)
Q Consensus 431 ~~NILld~~~~~~i~df 447 (451)
|+|||+++++.+||+||
T Consensus 213 ~~NILl~~~~~vKi~DF 229 (353)
T 4ase_A 213 ARNILLSEKNVVKICDF 229 (353)
T ss_dssp GGGEEECGGGCEEECCC
T ss_pred ccceeeCCCCCEEECcc
Confidence 99999999999999998
No 16
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=99.96 E-value=6.3e-29 Score=241.72 Aligned_cols=174 Identities=81% Similarity=1.257 Sum_probs=148.3
Q ss_pred CCCCchhhhcCccccccHHHHHHHhcCCCCCCccCccCCceEEEEEeCCCCEEEEEEcccccccccHHHHHHHHHHHhcC
Q 013004 274 PAEDDSELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMA 353 (451)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l 353 (451)
+....+....+..+.+++.++....++|+..+.||+|+||.||+|+..+++.||||+++..........+.+|+.+++.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l 84 (326)
T 3uim_A 5 PAEEDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMA 84 (326)
T ss_dssp ----------CCCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTC
T ss_pred CcccCcccccCccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhc
Confidence 34444555566778899999999999999999999999999999998889999999997654444444789999999999
Q ss_pred CCCCccceeeEEecCCeeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCc
Q 013004 354 VHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAAN 433 (451)
Q Consensus 354 ~H~niv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~N 433 (451)
+||||+++++++...+..++||||+++|+|.+++.........++|..+..++.|++.||+|||+.+.++|+||||||+|
T Consensus 85 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~N 164 (326)
T 3uim_A 85 VHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAAN 164 (326)
T ss_dssp CCTTBCCCCEEECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGG
T ss_pred cCCCccceEEEEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhh
Confidence 99999999999999999999999999999999998876555669999999999999999999999878899999999999
Q ss_pred eeeCCCCCccchhh
Q 013004 434 ILLDEDADQSSKTI 447 (451)
Q Consensus 434 ILld~~~~~~i~df 447 (451)
||+++++.++|+||
T Consensus 165 il~~~~~~~kl~Df 178 (326)
T 3uim_A 165 ILLDEEFEAVVGDF 178 (326)
T ss_dssp EEECTTCCEEECCC
T ss_pred EEECCCCCEEeccC
Confidence 99999999999998
No 17
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=99.95 E-value=9.4e-29 Score=246.36 Aligned_cols=141 Identities=23% Similarity=0.412 Sum_probs=123.7
Q ss_pred cCCCCCCccCccCCceEEEEEe-CCCCEEEEEEccccccc-ccHHHHHHHHHHHhcCCCCCccceeeEEec------CCe
Q 013004 299 DGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTS-GGELQFQTEVKIISMAVHRNLLRLYGFCTT------VTE 370 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~------~~~ 370 (451)
++|+..+.||+|+||+||+|+. .+|+.||||+++..... .....+.+|+.+|+.++|||||++++++.. .+.
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 5688889999999999999986 46999999999654322 223468899999999999999999998764 357
Q ss_pred eeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 371 KLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 371 ~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
.|+|||||+ |+|.+++.... .+++.++..++.|++.||.|||++ +||||||||+|||++.++.+||+||
T Consensus 134 ~~ivmE~~~-g~L~~~i~~~~----~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DF 202 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIHSSQ----PLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDF 202 (398)
T ss_dssp EEEEEECCS-EEHHHHHTSSS----CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCC
T ss_pred EEEEEeCCC-CCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeec
Confidence 899999996 78999997653 489999999999999999999999 9999999999999999999999998
No 18
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=99.95 E-value=4.3e-28 Score=252.65 Aligned_cols=143 Identities=28% Similarity=0.383 Sum_probs=124.9
Q ss_pred hcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccc--cccHHHHH---HHHHHHhcCCCCCccceeeEEecCCee
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQ---TEVKIISMAVHRNLLRLYGFCTTVTEK 371 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~---~E~~~l~~l~H~niv~l~~~~~~~~~~ 371 (451)
.++|+..++||+|+||+||+|+.+ +|+.||||++++... ........ .++.+++.++|||||++++++.+.+..
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l 267 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 267 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence 478999999999999999999874 689999999965321 12222233 345677788999999999999999999
Q ss_pred eEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 372 LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 372 ~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|+||||++||+|.+++.... .+++..+..++.||+.||+|||++ +||||||||+|||+|.+|.+||+||
T Consensus 268 ylVmEy~~GGdL~~~l~~~~----~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~DF 336 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLSQHG----VFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDL 336 (689)
T ss_dssp EEEECCCCSCBHHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEECCC
T ss_pred EEEEecCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEeccc
Confidence 99999999999999998764 389999999999999999999999 9999999999999999999999998
No 19
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=99.95 E-value=5.9e-28 Score=237.91 Aligned_cols=139 Identities=20% Similarity=0.352 Sum_probs=123.6
Q ss_pred HHhcCCCCCCccCccCCceEEEEEeC----CCCEEEEEEcccccccccHHHHHHHHHHHhcC-CCCCccceeeEEecCCe
Q 013004 296 VATDGFSNKNILGRGGFGKVYKGRLA----DGKLVAVKRLKEERTSGGELQFQTEVKIISMA-VHRNLLRLYGFCTTVTE 370 (451)
Q Consensus 296 ~~~~~f~~~~~lG~G~fg~Vy~~~~~----~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~ 370 (451)
...+.|+..+.||+|+||+||+|+.+ +++.||||.+... ....++.+|+.++..+ +|||||++++++.+.+.
T Consensus 18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~---~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~ 94 (361)
T 4f9c_A 18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPT---SHPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDH 94 (361)
T ss_dssp GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTT---SCHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTE
T ss_pred CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccc---cCHHHHHHHHHHHHHhcCCCCCceEEEEEEECCE
Confidence 34578999999999999999999753 4678999988543 2334688999999888 69999999999999999
Q ss_pred eeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCC-CCccchhh
Q 013004 371 KLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDED-ADQSSKTI 447 (451)
Q Consensus 371 ~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~-~~~~i~df 447 (451)
.++||||+++|+|.+++. .+++.++..++.|++.||+|||++ +|+||||||+|||++.+ +.+||+||
T Consensus 95 ~~lvmE~~~g~~L~~~~~-------~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl~DF 162 (361)
T 4f9c_A 95 VVIAMPYLEHESFLDILN-------SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALVDF 162 (361)
T ss_dssp EEEEEECCCCCCHHHHHT-------TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCC
T ss_pred EEEEEeCCCcccHHHHHc-------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEECcC
Confidence 999999999999999984 278999999999999999999999 99999999999999987 78999998
No 20
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=99.94 E-value=4.8e-27 Score=245.03 Aligned_cols=143 Identities=20% Similarity=0.338 Sum_probs=127.2
Q ss_pred hcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEe
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 376 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 376 (451)
.++|+..+.||+|+||+||+|+.+ +|+.||||+++.... .....+.+|+.+|+.++|||||++++++.+.+..++|||
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~-~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E 234 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHE-SDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYE 234 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSH-HHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEE
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccch-hhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEe
Confidence 367888999999999999999864 689999999865332 223468899999999999999999999999999999999
Q ss_pred cCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCC--CCccchhh
Q 013004 377 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDED--ADQSSKTI 447 (451)
Q Consensus 377 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~--~~~~i~df 447 (451)
||++|+|.+++..... .+++.++..++.||+.||+|||++ +|+||||||+|||++.+ +.+||+||
T Consensus 235 ~~~gg~L~~~i~~~~~---~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DF 301 (573)
T 3uto_A 235 FMSGGELFEKVADEHN---KMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDF 301 (573)
T ss_dssp CCCCCBHHHHHTCTTS---CEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCC
T ss_pred ecCCCcHHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeec
Confidence 9999999999975432 489999999999999999999999 99999999999999965 78999998
No 21
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=99.94 E-value=1.2e-26 Score=225.30 Aligned_cols=152 Identities=43% Similarity=0.725 Sum_probs=135.5
Q ss_pred HHHHHHhcCCCCCCccCccCCceEEEEEeCCCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCee
Q 013004 292 RELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEK 371 (451)
Q Consensus 292 ~~~~~~~~~f~~~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 371 (451)
.++...+++|+..+.||+|+||.||+|++++++.||||++.... ......+.+|+.+++.++||||+++++++...+..
T Consensus 32 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 110 (321)
T 2qkw_B 32 VDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPES-SQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEM 110 (321)
T ss_dssp SCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCC-SSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCC
T ss_pred HHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccC-hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeE
Confidence 34445678899999999999999999998889999999886543 23345789999999999999999999999999999
Q ss_pred eEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 372 LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 372 ~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
++||||+++|+|.+++.........++|.++..++.|++.||.|||+. +|+||||||+||+++.++.+|++||
T Consensus 111 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Df 183 (321)
T 2qkw_B 111 ILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDF 183 (321)
T ss_dssp EEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEECCC
T ss_pred EEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEEeec
Confidence 999999999999999976654444689999999999999999999999 9999999999999999999999998
No 22
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=99.93 E-value=2e-26 Score=232.76 Aligned_cols=152 Identities=20% Similarity=0.293 Sum_probs=133.3
Q ss_pred cHHHHHHHhcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccc--cccHHHHHHHHHHHhcCCCCCccceeeEEe
Q 013004 290 SLRELQVATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVKIISMAVHRNLLRLYGFCT 366 (451)
Q Consensus 290 ~~~~~~~~~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~ 366 (451)
.+.++....++|+..++||+|+||+||+|+.+ +++.||||+++.... ......+.+|+.++..++||||+++++++.
T Consensus 65 ~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 144 (437)
T 4aw2_A 65 KVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQ 144 (437)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe
Confidence 34555666789999999999999999999975 478999999965321 122234889999999999999999999999
Q ss_pred cCCeeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchh
Q 013004 367 TVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKT 446 (451)
Q Consensus 367 ~~~~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~d 446 (451)
+.+..++||||+++|+|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+|||+|.++.+||+|
T Consensus 145 ~~~~~~lV~Ey~~gg~L~~~l~~~~~---~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~vkL~D 218 (437)
T 4aw2_A 145 DDNNLYLVMDYYVGGDLLTLLSKFED---RLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLAD 218 (437)
T ss_dssp CSSEEEEEECCCTTCBHHHHHHTTTT---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECC
T ss_pred eCCEEEEEEecCCCCcHHHHHHHccC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCEEEcc
Confidence 99999999999999999999986422 489999999999999999999999 999999999999999999999999
Q ss_pred h
Q 013004 447 I 447 (451)
Q Consensus 447 f 447 (451)
|
T Consensus 219 F 219 (437)
T 4aw2_A 219 F 219 (437)
T ss_dssp C
T ss_pred h
Confidence 8
No 23
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.93 E-value=4.7e-26 Score=223.56 Aligned_cols=143 Identities=21% Similarity=0.350 Sum_probs=128.2
Q ss_pred hcCCCCCCccCccCCceEEEEEe-CCCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEe
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 376 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 376 (451)
.++|+..+.||+|+||+||+|+. .+|+.||||++...........+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 9 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~E 88 (347)
T 3zgw_A 9 LKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLE 88 (347)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEEe
Confidence 45678889999999999999986 57899999998655433334468999999999999999999999999999999999
Q ss_pred cCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 377 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 377 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|+++|+|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+|||+++++.+||+||
T Consensus 89 ~~~gg~L~~~l~~~~----~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL~DF 152 (347)
T 3zgw_A 89 YCPGGELFDYIISQD----RLSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDF 152 (347)
T ss_dssp CCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCC
T ss_pred CCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEEEec
Confidence 999999999997654 389999999999999999999999 9999999999999999999999998
No 24
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=99.93 E-value=4.8e-26 Score=225.88 Aligned_cols=144 Identities=31% Similarity=0.450 Sum_probs=128.3
Q ss_pred hcCCCCCCccCccCCceEEEEEeC----CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeE
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLA----DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLL 373 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~----~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 373 (451)
.++|+..+.||+|+||.||+|+.. ++..||||.++..........|.+|+.+++.++||||+++++++...+..++
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 123 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence 356888999999999999999864 4678999999765433344579999999999999999999999999999999
Q ss_pred EEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 374 VYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 374 v~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
||||+++|+|.+++.... ..+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+|++||
T Consensus 124 v~e~~~~~sL~~~l~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Df 191 (373)
T 2qol_A 124 VTEYMENGSLDSFLRKHD---AQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDF 191 (373)
T ss_dssp EEECCTTCBHHHHHHTTT---TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC
T ss_pred EEeCCCCCcHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcC
Confidence 999999999999997653 2489999999999999999999999 9999999999999999999999998
No 25
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=99.93 E-value=6.3e-26 Score=221.09 Aligned_cols=143 Identities=24% Similarity=0.401 Sum_probs=128.7
Q ss_pred hcCCCCCCccCccCCceEEEEEe-CCCCEEEEEEccccccc-ccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEE
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTS-GGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 375 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (451)
.++|...+.||+|+||.||+|+. .+|+.||||++...... .....+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 93 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM 93 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 45688889999999999999997 57999999998654322 22346889999999999999999999999999999999
Q ss_pred ecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 376 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 376 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+||
T Consensus 94 e~~~~~~L~~~l~~~~----~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DF 158 (328)
T 3fe3_A 94 EYASGGEVFDYLVAHG----RMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADF 158 (328)
T ss_dssp CCCTTCBHHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECST
T ss_pred ECCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeec
Confidence 9999999999997754 389999999999999999999999 9999999999999999999999998
No 26
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=99.93 E-value=5.9e-26 Score=225.02 Aligned_cols=147 Identities=28% Similarity=0.454 Sum_probs=128.5
Q ss_pred hcCCCCCCccCccCCceEEEEEeC--------CCCEEEEEEcccccccccHHHHHHHHHHHhcC-CCCCccceeeEEecC
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLA--------DGKLVAVKRLKEERTSGGELQFQTEVKIISMA-VHRNLLRLYGFCTTV 368 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~--------~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~ 368 (451)
.++|...+.||+|+||.||+|++. ++..||||+++..........+.+|+.++..+ +||||+++++++...
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 456778899999999999999852 34579999997654433445799999999999 899999999999999
Q ss_pred CeeeEEEecCCCCChhHHhhccCC------------CCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceee
Q 013004 369 TEKLLVYPYMTNGSVASRLRERQS------------SLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILL 436 (451)
Q Consensus 369 ~~~~lv~ey~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILl 436 (451)
+..++||||+++|+|.+++..... ....+++.++..++.|++.||+|||++ +|+||||||+|||+
T Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll 236 (370)
T 2psq_A 160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLV 236 (370)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEE
T ss_pred CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchhhEEE
Confidence 999999999999999999987532 123479999999999999999999999 99999999999999
Q ss_pred CCCCCccchhh
Q 013004 437 DEDADQSSKTI 447 (451)
Q Consensus 437 d~~~~~~i~df 447 (451)
+.++.+||+||
T Consensus 237 ~~~~~~kl~DF 247 (370)
T 2psq_A 237 TENNVMKIADF 247 (370)
T ss_dssp CTTCCEEECCC
T ss_pred CCCCCEEEccc
Confidence 99999999998
No 27
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=99.93 E-value=7.7e-26 Score=219.86 Aligned_cols=146 Identities=21% Similarity=0.327 Sum_probs=125.9
Q ss_pred hcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCC-------
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVT------- 369 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~------- 369 (451)
.++|+..+.||+|+||.||+|+.. +++.||||+++..........+.+|+.+++.++|||||++++++.+..
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 84 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE 84 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence 356788899999999999999975 789999999975444444557999999999999999999999986543
Q ss_pred --------------------------------------------------eeeEEEecCCCCChhHHhhccCCCCCCCCH
Q 013004 370 --------------------------------------------------EKLLVYPYMTNGSVASRLRERQSSLPPLDW 399 (451)
Q Consensus 370 --------------------------------------------------~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~ 399 (451)
..++||||+++|+|.+++..... ....++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~-~~~~~~ 163 (332)
T 3qd2_B 85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCS-LEDREH 163 (332)
T ss_dssp HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCS-GGGSCH
T ss_pred hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccC-ccchhh
Confidence 27999999999999999987543 234677
Q ss_pred HHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 400 PTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 400 ~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+||
T Consensus 164 ~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Df 208 (332)
T 3qd2_B 164 GVCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDF 208 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeec
Confidence 78899999999999999999 9999999999999999999999998
No 28
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=99.93 E-value=7.1e-26 Score=220.40 Aligned_cols=143 Identities=29% Similarity=0.420 Sum_probs=127.2
Q ss_pred cCCCCCCccCccCCceEEEEEeC----CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEE
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA----DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLV 374 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~----~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 374 (451)
++|...+.||+|+||.||+|++. .+..||||+++..........|.+|+.++..++||||+++++++.+.+..++|
T Consensus 49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 128 (325)
T 3kul_A 49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIV 128 (325)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEE
T ss_pred hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEE
Confidence 45677789999999999999974 34569999997654444455799999999999999999999999999999999
Q ss_pred EecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 375 YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 375 ~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|||+++|+|.+++..... .+++.++..++.|++.||.|||+. +|+||||||+|||++.++.++|+||
T Consensus 129 ~e~~~~~~L~~~l~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Df 195 (325)
T 3kul_A 129 TEYMENGSLDTFLRTHDG---QFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDF 195 (325)
T ss_dssp EECCTTCBHHHHHHTTTT---CSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCC
T ss_pred eeCCCCCcHHHHHHhccc---CCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCC
Confidence 999999999999976432 489999999999999999999999 9999999999999999999999998
No 29
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=99.93 E-value=3.7e-26 Score=227.06 Aligned_cols=144 Identities=31% Similarity=0.467 Sum_probs=128.7
Q ss_pred hcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEe
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 376 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 376 (451)
.++|...+.||+|+||.||+|++. +++.||||.++.........+|.+|+.+++.++||||+++++++...+..++|||
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 192 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVME 192 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEE
Confidence 456777899999999999999985 6899999998754333333468999999999999999999999999999999999
Q ss_pred cCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 377 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 377 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|+++|+|.++++.... .+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+||
T Consensus 193 ~~~~g~L~~~l~~~~~---~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~Df 257 (377)
T 3cbl_A 193 LVQGGDFLTFLRTEGA---RLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDF 257 (377)
T ss_dssp CCTTCBHHHHHHHHGG---GCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCG
T ss_pred cCCCCCHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcC
Confidence 9999999999986532 378999999999999999999999 9999999999999999999999998
No 30
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=99.93 E-value=4.2e-26 Score=228.86 Aligned_cols=152 Identities=21% Similarity=0.284 Sum_probs=133.5
Q ss_pred cHHHHHHHhcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccc--cccHHHHHHHHHHHhcCCCCCccceeeEEe
Q 013004 290 SLRELQVATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVKIISMAVHRNLLRLYGFCT 366 (451)
Q Consensus 290 ~~~~~~~~~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~ 366 (451)
.+.+.....++|+..+.||+|+||+||+|+.+ +++.||||++++... ......+.+|..++..++||||+++++++.
T Consensus 52 ~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 131 (412)
T 2vd5_A 52 RLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQ 131 (412)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEe
Confidence 44555666789999999999999999999974 689999999964321 122235889999999999999999999999
Q ss_pred cCCeeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchh
Q 013004 367 TVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKT 446 (451)
Q Consensus 367 ~~~~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~d 446 (451)
+.+..|+||||+++|+|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+|||+|.++.+||+|
T Consensus 132 ~~~~~~lVmE~~~gg~L~~~l~~~~~---~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~vkL~D 205 (412)
T 2vd5_A 132 DENYLYLVMEYYVGGDLLTLLSKFGE---RIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIRLAD 205 (412)
T ss_dssp CSSEEEEEECCCCSCBHHHHHHHHSS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECC
T ss_pred eCCEEEEEEcCCCCCcHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCEEEee
Confidence 99999999999999999999986532 389999999999999999999999 999999999999999999999999
Q ss_pred h
Q 013004 447 I 447 (451)
Q Consensus 447 f 447 (451)
|
T Consensus 206 F 206 (412)
T 2vd5_A 206 F 206 (412)
T ss_dssp C
T ss_pred c
Confidence 8
No 31
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=99.93 E-value=4.3e-26 Score=228.59 Aligned_cols=149 Identities=23% Similarity=0.325 Sum_probs=131.2
Q ss_pred HHHHHHHhcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccc--cccHHHHHHHHHHHhcCCCCCccceeeEEec
Q 013004 291 LRELQVATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVKIISMAVHRNLLRLYGFCTT 367 (451)
Q Consensus 291 ~~~~~~~~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~ 367 (451)
+.++....++|+..+.||+|+||+||+|+.+ +++.||+|+++.... ......+.+|+.++..++|||||++++++.+
T Consensus 61 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~ 140 (410)
T 3v8s_A 61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 140 (410)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred HHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE
Confidence 3445556788999999999999999999975 588999999865321 2223358899999999999999999999999
Q ss_pred CCeeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 368 VTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 368 ~~~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
.+..++||||+++|+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+|||+|.++.+||+||
T Consensus 141 ~~~~~lV~E~~~gg~L~~~l~~~-----~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DF 212 (410)
T 3v8s_A 141 DRYLYMVMEYMPGGDLVNLMSNY-----DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADF 212 (410)
T ss_dssp SSEEEEEECCCTTEEHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCC
T ss_pred CCEEEEEEeCCCCCcHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEEecc
Confidence 99999999999999999999764 278999999999999999999999 9999999999999999999999998
No 32
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=99.93 E-value=1.1e-25 Score=220.01 Aligned_cols=143 Identities=24% Similarity=0.338 Sum_probs=128.4
Q ss_pred hcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEccccc--ccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEE
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEER--TSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLV 374 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 374 (451)
.++|+..+.||+|+||+||+|+.. +++.||||+++... .......+.+|+.++..++||||+++++++.+.+..++|
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence 356888899999999999999875 68999999996542 223345688999999999999999999999999999999
Q ss_pred EecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 375 YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 375 ~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+||
T Consensus 84 ~E~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DF 149 (337)
T 1o6l_A 84 MEYANGGELFFHLSRER----VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDF 149 (337)
T ss_dssp EECCTTCBHHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCC
T ss_pred EeCCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeec
Confidence 99999999999998653 389999999999999999999999 9999999999999999999999998
No 33
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=99.92 E-value=8.4e-26 Score=219.70 Aligned_cols=143 Identities=25% Similarity=0.389 Sum_probs=125.7
Q ss_pred hcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEe
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 376 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 376 (451)
.++|+..+.||+|+||+||+|+.. +++.||||++...........+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 85 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence 357888899999999999999875 6899999998654433334568999999999999999999999999999999999
Q ss_pred cCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 377 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 377 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|+++|+|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+||
T Consensus 86 ~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Df 149 (323)
T 3tki_A 86 YCSGGELFDRIEPDI----GMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDF 149 (323)
T ss_dssp CCTTEEGGGGSBTTT----BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCC
T ss_pred cCCCCcHHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEe
Confidence 999999999987543 389999999999999999999999 9999999999999999999999998
No 34
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=99.92 E-value=2.9e-25 Score=213.25 Aligned_cols=141 Identities=22% Similarity=0.363 Sum_probs=128.0
Q ss_pred hcCCCCCCccCccCCceEEEEEe-CCCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEe
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 376 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 376 (451)
.++|+..+.||+|+||+||+|+. .+++.||||++..... .....+.+|+.+++.++||||+++++++...+..++|||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 97 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ-PKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME 97 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGC-SCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccc-cHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEE
Confidence 46789999999999999999985 5689999999865432 234568999999999999999999999999999999999
Q ss_pred cCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 377 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 377 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|+++|+|.+++... .+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+||
T Consensus 98 ~~~~~~L~~~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Df 160 (297)
T 3fxz_A 98 YLAGGSLTDVVTET-----CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDF 160 (297)
T ss_dssp CCTTCBHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCC
T ss_pred CCCCCCHHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeC
Confidence 99999999999764 288999999999999999999999 9999999999999999999999998
No 35
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=99.92 E-value=2.7e-25 Score=214.52 Aligned_cols=142 Identities=25% Similarity=0.452 Sum_probs=127.3
Q ss_pred cCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEec
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 377 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey 377 (451)
++|...+.||+|+||+||+|+.. +++.||+|.+.... ......|.+|+.++..++||||+++++++.+.+..++||||
T Consensus 10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 88 (310)
T 3s95_A 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFD-EETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEY 88 (310)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCC-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCC-HHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEe
Confidence 45777899999999999999974 58999999885432 22345799999999999999999999999999999999999
Q ss_pred CCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 378 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 378 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+++|+|.+++..... .++|.++..++.|++.||+|||+. +|+||||||+|||++.++.+|++||
T Consensus 89 ~~~~~L~~~l~~~~~---~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Df 152 (310)
T 3s95_A 89 IKGGTLRGIIKSMDS---QYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADF 152 (310)
T ss_dssp CTTCBHHHHHHHCCT---TSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCC
T ss_pred cCCCcHHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeec
Confidence 999999999987432 489999999999999999999999 9999999999999999999999998
No 36
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=99.92 E-value=1.3e-25 Score=221.11 Aligned_cols=145 Identities=29% Similarity=0.430 Sum_probs=127.4
Q ss_pred HHhcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEccccc--ccccHHHHHHHHHHHhcC-CCCCccceeeEEecCCee
Q 013004 296 VATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEER--TSGGELQFQTEVKIISMA-VHRNLLRLYGFCTTVTEK 371 (451)
Q Consensus 296 ~~~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~ 371 (451)
...++|+..+.||+|+||+||+|+.. +++.||||+++... .......+.+|..++..+ +||||+++++++.+.+..
T Consensus 20 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~ 99 (353)
T 3txo_A 20 LGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRL 99 (353)
T ss_dssp ---CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred CchhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEE
Confidence 34578999999999999999999875 58999999996542 122334678899999887 699999999999999999
Q ss_pred eEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 372 LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 372 ~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
++||||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+||
T Consensus 100 ~lv~E~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DF 168 (353)
T 3txo_A 100 FFVMEFVNGGDLMFHIQKSR----RFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADF 168 (353)
T ss_dssp EEEEECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCC
T ss_pred EEEEeCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEccc
Confidence 99999999999999998754 389999999999999999999999 9999999999999999999999998
No 37
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=99.92 E-value=3.5e-25 Score=215.13 Aligned_cols=151 Identities=22% Similarity=0.308 Sum_probs=131.7
Q ss_pred cccHHHHHHHhcC----------CCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCC
Q 013004 288 RFSLRELQVATDG----------FSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHR 356 (451)
Q Consensus 288 ~~~~~~~~~~~~~----------f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~ 356 (451)
.++.+++..+++. |+..+.||+|+||.||+|+.. +|+.||||+++... ......+.+|+.+++.++||
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~ 102 (321)
T 2c30_A 24 VVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRK-QQRRELLFNEVVIMRDYQHF 102 (321)
T ss_dssp -CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT-CCSHHHHHHHHHHHTTCCCT
T ss_pred cCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccc-hhHHHHHHHHHHHHHhCCCC
Confidence 4566666666543 455678999999999999975 69999999986543 23345789999999999999
Q ss_pred CccceeeEEecCCeeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceee
Q 013004 357 NLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILL 436 (451)
Q Consensus 357 niv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILl 436 (451)
||+++++++...+..++||||+++|+|.+++... .+++..+..++.|++.||.|||+. +|+||||||+|||+
T Consensus 103 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-----~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll 174 (321)
T 2c30_A 103 NVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQV-----RLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDSILL 174 (321)
T ss_dssp TBCCEEEEEEETTEEEEEECCCCSCBHHHHHTTC-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEE
T ss_pred CcceEEEEEEECCEEEEEEecCCCCCHHHHHHhc-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEE
Confidence 9999999999999999999999999999998643 389999999999999999999999 99999999999999
Q ss_pred CCCCCccchhh
Q 013004 437 DEDADQSSKTI 447 (451)
Q Consensus 437 d~~~~~~i~df 447 (451)
+.++.+|++||
T Consensus 175 ~~~~~~kl~Df 185 (321)
T 2c30_A 175 TLDGRVKLSDF 185 (321)
T ss_dssp CTTCCEEECCC
T ss_pred CCCCcEEEeee
Confidence 99999999998
No 38
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=99.92 E-value=6.2e-25 Score=211.53 Aligned_cols=158 Identities=42% Similarity=0.706 Sum_probs=139.3
Q ss_pred ccccccHHHHHHHhcCCCCC------CccCccCCceEEEEEeCCCCEEEEEEcccccc---cccHHHHHHHHHHHhcCCC
Q 013004 285 QLKRFSLRELQVATDGFSNK------NILGRGGFGKVYKGRLADGKLVAVKRLKEERT---SGGELQFQTEVKIISMAVH 355 (451)
Q Consensus 285 ~~~~~~~~~~~~~~~~f~~~------~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~---~~~~~~~~~E~~~l~~l~H 355 (451)
....+++.++...+++|... +.||+|+||.||+|+. +++.||||++..... ......+.+|+.++..++|
T Consensus 11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h 89 (307)
T 2nru_A 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQH 89 (307)
T ss_dssp CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCC
T ss_pred CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCC
Confidence 34578899999999999877 8899999999999997 678999999864321 2223478999999999999
Q ss_pred CCccceeeEEecCCeeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCcee
Q 013004 356 RNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANIL 435 (451)
Q Consensus 356 ~niv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NIL 435 (451)
|||+++++++...+..++||||+++|+|.+++..... ...++|..+..++.|++.||.|||+. +|+||||||+||+
T Consensus 90 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil 165 (307)
T 2nru_A 90 ENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDG-TPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANIL 165 (307)
T ss_dssp TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGG-CCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEE
T ss_pred CCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEE
Confidence 9999999999999999999999999999999975432 23589999999999999999999999 9999999999999
Q ss_pred eCCCCCccchhh
Q 013004 436 LDEDADQSSKTI 447 (451)
Q Consensus 436 ld~~~~~~i~df 447 (451)
++.++.++++||
T Consensus 166 i~~~~~~kl~Df 177 (307)
T 2nru_A 166 LDEAFTAKISDF 177 (307)
T ss_dssp ECTTCCEEECCC
T ss_pred EcCCCcEEEeec
Confidence 999999999998
No 39
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=99.92 E-value=2.2e-25 Score=216.27 Aligned_cols=143 Identities=29% Similarity=0.429 Sum_probs=127.9
Q ss_pred hcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccc--cccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEE
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLV 374 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 374 (451)
.++|+..+.||+|+||+||+|+.. +|+.||+|+++.... ......+.+|+.+++.++||||+++++++.+....++|
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 84 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 84 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence 356888899999999999999975 689999999965421 22344688999999999999999999999999999999
Q ss_pred EecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 375 YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 375 ~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+|++||
T Consensus 85 ~e~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Df 150 (318)
T 1fot_A 85 MDYIEGGELFSLLRKSQ----RFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDF 150 (318)
T ss_dssp ECCCCSCBHHHHHHHTS----SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCC
T ss_pred EeCCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeec
Confidence 99999999999998653 389999999999999999999999 9999999999999999999999998
No 40
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=99.92 E-value=1.6e-25 Score=219.07 Aligned_cols=149 Identities=30% Similarity=0.484 Sum_probs=130.7
Q ss_pred HHhcCCCCCCccCccCCceEEEEEeC------CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCC
Q 013004 296 VATDGFSNKNILGRGGFGKVYKGRLA------DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVT 369 (451)
Q Consensus 296 ~~~~~f~~~~~lG~G~fg~Vy~~~~~------~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~ 369 (451)
...++|+..+.||+|+||.||+|+.. +++.||||.++..........+.+|+.++..++||||+++++++...+
T Consensus 44 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 123 (343)
T 1luf_A 44 YPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGK 123 (343)
T ss_dssp CCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS
T ss_pred ecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCC
Confidence 34577888899999999999999874 347899999976544334457999999999999999999999999999
Q ss_pred eeeEEEecCCCCChhHHhhccCCC--------------------CCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCC
Q 013004 370 EKLLVYPYMTNGSVASRLRERQSS--------------------LPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDV 429 (451)
Q Consensus 370 ~~~lv~ey~~~gsL~~~l~~~~~~--------------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDl 429 (451)
..++||||+++|+|.+++...... ...+++.++..++.|++.||.|||++ +|+||||
T Consensus 124 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dl 200 (343)
T 1luf_A 124 PMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDL 200 (343)
T ss_dssp SCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred ceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCC
Confidence 999999999999999999874311 14589999999999999999999999 9999999
Q ss_pred CCCceeeCCCCCccchhh
Q 013004 430 KAANILLDEDADQSSKTI 447 (451)
Q Consensus 430 K~~NILld~~~~~~i~df 447 (451)
||+|||++.++.+|++||
T Consensus 201 kp~NIl~~~~~~~kl~Df 218 (343)
T 1luf_A 201 ATRNCLVGENMVVKIADF 218 (343)
T ss_dssp SGGGEEECGGGCEEECCC
T ss_pred CcceEEECCCCeEEEeec
Confidence 999999999999999998
No 41
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=99.92 E-value=1.9e-25 Score=221.11 Aligned_cols=147 Identities=31% Similarity=0.421 Sum_probs=127.5
Q ss_pred hcCCCCCCccCccCCceEEEEEeC------CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCee
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLA------DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEK 371 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~------~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 371 (451)
.++|+..+.||+|+||+||+|++. +++.||||+++..........+.+|+.+++.++|||||++++++......
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 149 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 149 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 356777899999999999999853 36689999997554444455789999999999999999999999999999
Q ss_pred eEEEecCCCCChhHHhhccCC---CCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCC---Cccch
Q 013004 372 LLVYPYMTNGSVASRLRERQS---SLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDA---DQSSK 445 (451)
Q Consensus 372 ~lv~ey~~~gsL~~~l~~~~~---~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~---~~~i~ 445 (451)
++||||+++|+|.+++..... ....+++.++..++.|++.||+|||+. +|+||||||+|||++.++ .+|++
T Consensus 150 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kL~ 226 (367)
T 3l9p_A 150 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIG 226 (367)
T ss_dssp EEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCceEEEC
Confidence 999999999999999987542 223589999999999999999999999 999999999999999655 48999
Q ss_pred hh
Q 013004 446 TI 447 (451)
Q Consensus 446 df 447 (451)
||
T Consensus 227 DF 228 (367)
T 3l9p_A 227 DF 228 (367)
T ss_dssp CC
T ss_pred CC
Confidence 98
No 42
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=99.92 E-value=2e-25 Score=218.99 Aligned_cols=146 Identities=25% Similarity=0.425 Sum_probs=127.7
Q ss_pred HHHhcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccc--cccHHHHHHHHHHHhcC-CCCCccceeeEEecCCe
Q 013004 295 QVATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVKIISMA-VHRNLLRLYGFCTTVTE 370 (451)
Q Consensus 295 ~~~~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~ 370 (451)
....++|...+.||+|+||+||+|+.+ +++.||||+++.... ......+..|..++..+ +||||+++++++.+.+.
T Consensus 13 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~ 92 (345)
T 1xjd_A 13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKEN 92 (345)
T ss_dssp ---CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCE
Confidence 345678999999999999999999975 588999999965421 23344678888888866 89999999999999999
Q ss_pred eeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 371 KLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 371 ~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
.++||||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+|++||
T Consensus 93 ~~lv~E~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DF 162 (345)
T 1xjd_A 93 LFFVMEYLNGGDLMYHIQSCH----KFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADF 162 (345)
T ss_dssp EEEEEECCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCC
T ss_pred EEEEEeCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeEC
Confidence 999999999999999998753 389999999999999999999999 9999999999999999999999998
No 43
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=99.92 E-value=2.7e-25 Score=220.94 Aligned_cols=143 Identities=25% Similarity=0.351 Sum_probs=128.0
Q ss_pred hcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEccccc--ccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEE
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEER--TSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLV 374 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 374 (451)
.++|+..+.||+|+||.||+|+.. +++.||+|.++... .......+.+|+.++..++|||||++++++.+....++|
T Consensus 14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv 93 (384)
T 4fr4_A 14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMV 93 (384)
T ss_dssp GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 356788899999999999999865 58899999986543 223345788999999999999999999999999999999
Q ss_pred EecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 375 YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 375 ~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|||+.+|+|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+||
T Consensus 94 ~e~~~gg~L~~~l~~~~----~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DF 159 (384)
T 4fr4_A 94 VDLLLGGDLRYHLQQNV----HFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDF 159 (384)
T ss_dssp ECCCTTEEHHHHHHTTC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCC
T ss_pred EecCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEecc
Confidence 99999999999997643 389999999999999999999999 9999999999999999999999998
No 44
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.92 E-value=3.4e-25 Score=209.32 Aligned_cols=142 Identities=27% Similarity=0.454 Sum_probs=128.3
Q ss_pred hcCCCCCCccCccCCceEEEEEeCCCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEec
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 377 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey 377 (451)
.++|+..+.||+|+||.||+|+..+++.||+|+++.... ...++.+|+.++..++||||+++++++.+.+..++||||
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 86 (269)
T 4hcu_A 9 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM--SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEF 86 (269)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSB--CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred hhhceeeheecCCCccEEEEEEecCCCeEEEEEeccccc--CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEe
Confidence 356777899999999999999998888999999965432 335789999999999999999999999999999999999
Q ss_pred CCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 378 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 378 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+++|+|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++++||
T Consensus 87 ~~~~~L~~~l~~~~~---~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Df 150 (269)
T 4hcu_A 87 MEHGCLSDYLRTQRG---LFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDF 150 (269)
T ss_dssp CTTCBHHHHHHTTTT---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCT
T ss_pred CCCCcHHHHHHhcCc---ccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEeccc
Confidence 999999999976532 489999999999999999999999 9999999999999999999999998
No 45
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=99.92 E-value=2.2e-25 Score=222.40 Aligned_cols=143 Identities=26% Similarity=0.363 Sum_probs=126.2
Q ss_pred hcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccc--cHHHHHHHHHHHhcC-CCCCccceeeEEecCCeeeE
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSG--GELQFQTEVKIISMA-VHRNLLRLYGFCTTVTEKLL 373 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~--~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~l 373 (451)
.++|+..++||+|+||+||+|+.+ +++.||||+++...... ....+.+|..++..+ +|||||++++++.+.+..++
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 467888999999999999999975 57899999997543222 223578899888776 89999999999999999999
Q ss_pred EEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 374 VYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 374 v~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
||||+++|+|..++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+||
T Consensus 131 V~E~~~gg~L~~~l~~~~----~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DF 197 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQRQR----KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDY 197 (396)
T ss_dssp EEECCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCC
T ss_pred EEEcCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeec
Confidence 999999999999998753 389999999999999999999999 9999999999999999999999998
No 46
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=99.92 E-value=3.9e-25 Score=217.43 Aligned_cols=142 Identities=24% Similarity=0.323 Sum_probs=127.7
Q ss_pred cCCCCCCccCccCCceEEEEEeC-CCCEEEEEEccccc--ccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEE
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEER--TSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 375 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (451)
++|+..+.||+|+||+||+|+.. +|+.||||+++... .......+.+|+.++..++||||+++++++.+....++||
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 120 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence 56788899999999999999975 68999999986543 1223456889999999999999999999999999999999
Q ss_pred ecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 376 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 376 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+||
T Consensus 121 e~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DF 185 (350)
T 1rdq_E 121 EYVAGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDF 185 (350)
T ss_dssp ECCTTCBHHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCC
T ss_pred cCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEccc
Confidence 9999999999998753 389999999999999999999999 9999999999999999999999998
No 47
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=99.92 E-value=4.3e-25 Score=211.69 Aligned_cols=142 Identities=23% Similarity=0.308 Sum_probs=127.1
Q ss_pred cCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccc--cHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEE
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSG--GELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 375 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (451)
++|+..+.||+|+||.||+|+.. +++.||+|.+....... ....+.+|+.++..++||||+++++++.+.+..++||
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 90 (294)
T 4eqm_A 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVM 90 (294)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEE
Confidence 56788899999999999999864 68999999985433222 2346899999999999999999999999999999999
Q ss_pred ecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 376 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 376 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+|++||
T Consensus 91 e~~~g~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Df 155 (294)
T 4eqm_A 91 EYIEGPTLSEYIESHG----PLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDF 155 (294)
T ss_dssp ECCCSCBHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC
T ss_pred eCCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeC
Confidence 9999999999998753 389999999999999999999999 9999999999999999999999998
No 48
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=99.92 E-value=3.9e-25 Score=217.02 Aligned_cols=142 Identities=27% Similarity=0.370 Sum_probs=126.4
Q ss_pred cCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccc--cHHHHHHHHHHHhcC-CCCCccceeeEEecCCeeeEE
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSG--GELQFQTEVKIISMA-VHRNLLRLYGFCTTVTEKLLV 374 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~--~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv 374 (451)
++|+..+.||+|+||+||+|+.+ +++.||||+++...... ....+.+|..++..+ +||||+++++++.+.+..++|
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 88 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 88 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence 56788899999999999999975 58899999997543222 233578899999887 899999999999999999999
Q ss_pred EecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 375 YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 375 ~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+||
T Consensus 89 ~e~~~gg~L~~~l~~~~----~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DF 154 (345)
T 3a8x_A 89 IEYVNGGDLMFHMQRQR----KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDY 154 (345)
T ss_dssp ECCCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCG
T ss_pred EeCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEec
Confidence 99999999999998653 389999999999999999999999 9999999999999999999999998
No 49
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=99.92 E-value=4.4e-25 Score=213.44 Aligned_cols=143 Identities=24% Similarity=0.436 Sum_probs=124.7
Q ss_pred hcCCCCCCccCccCCceEEEEEeCCCCEEEEEEccccccccc-HHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEe
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGG-ELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 376 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~-~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 376 (451)
.++|+..+.||+|+||+||+|+..+++.||+|+++....... ...+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 99 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFE 99 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEE
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEc
Confidence 456788899999999999999998899999999965433322 3468899999999999999999999999999999999
Q ss_pred cCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 377 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 377 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|+++ +|.+.+..... .+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+|++||
T Consensus 100 ~~~~-~l~~~~~~~~~---~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Df 163 (311)
T 3niz_A 100 FMEK-DLKKVLDENKT---GLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADF 163 (311)
T ss_dssp CCSE-EHHHHHHTCTT---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCC
T ss_pred CCCC-CHHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccC
Confidence 9984 88888876432 489999999999999999999999 9999999999999999999999998
No 50
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=99.92 E-value=6.6e-25 Score=212.71 Aligned_cols=146 Identities=27% Similarity=0.446 Sum_probs=114.9
Q ss_pred hcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEe
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 376 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 376 (451)
.++|+..+.||+|+||.||+|+.. +++.||+|+++..........+.+|+.+++.++||||+++++++...+..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 83 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE 83 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence 467888999999999999999864 6899999998655433344578899999999999999999999999999999999
Q ss_pred cCCCCChhHHhhccCC--CCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 377 YMTNGSVASRLRERQS--SLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 377 y~~~gsL~~~l~~~~~--~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|++ |+|.+++..... ....+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+||
T Consensus 84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Df 152 (317)
T 2pmi_A 84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDF 152 (317)
T ss_dssp CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCC
T ss_pred ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcC
Confidence 998 699998875421 123488999999999999999999999 9999999999999999999999998
No 51
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=99.92 E-value=7.5e-25 Score=216.21 Aligned_cols=143 Identities=24% Similarity=0.339 Sum_probs=127.1
Q ss_pred hcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccc-----cHHHHHHHHHHHhcCCCCCccceeeEEecCCee
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSG-----GELQFQTEVKIISMAVHRNLLRLYGFCTTVTEK 371 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~-----~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 371 (451)
.+.|+..+.||+|+||.||+|+.. +|+.||+|.++...... ....+.+|+.++..++||||+++++++.+....
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 90 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV 90 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence 456888899999999999999875 68999999996543221 235789999999999999999999999999999
Q ss_pred eEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCC----Cccchhh
Q 013004 372 LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDA----DQSSKTI 447 (451)
Q Consensus 372 ~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~----~~~i~df 447 (451)
++||||+++|+|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+|||+++++ .+||+||
T Consensus 91 ~lv~e~~~gg~L~~~l~~~~----~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~vkl~DF 163 (361)
T 2yab_A 91 VLILELVSGGELFDFLAQKE----SLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDF 163 (361)
T ss_dssp EEEEECCCSCBHHHHHTTCS----CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCC
T ss_pred EEEEEcCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCEEEEec
Confidence 99999999999999997643 489999999999999999999999 999999999999999877 6899998
No 52
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=99.92 E-value=3.4e-25 Score=215.82 Aligned_cols=143 Identities=25% Similarity=0.346 Sum_probs=122.2
Q ss_pred hcCCCCCCccCccCCceEEEEEe----CCCCEEEEEEcccccc---cccHHHHHHHHHHHhcCCCCCccceeeEEecCCe
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRL----ADGKLVAVKRLKEERT---SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTE 370 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~----~~~~~vAvK~~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 370 (451)
.++|+..+.||+|+||.||+|+. .+++.||+|+++.... ......+.+|+.++..++||||+++++++...+.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 45688889999999999999987 4689999999975432 1223357889999999999999999999999999
Q ss_pred eeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 371 KLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 371 ~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
.++||||+++|+|.+++.... .+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+||
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~Df 165 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLEREG----IFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDF 165 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECCC
T ss_pred EEEEEeCCCCCcHHHHHHhCC----CCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEeC
Confidence 999999999999999998653 378999999999999999999999 9999999999999999999999998
No 53
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=99.92 E-value=6.9e-25 Score=218.66 Aligned_cols=145 Identities=22% Similarity=0.301 Sum_probs=128.9
Q ss_pred hcCCCCCCccCcc--CCceEEEEEeC-CCCEEEEEEcccccccc-cHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeE
Q 013004 298 TDGFSNKNILGRG--GFGKVYKGRLA-DGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLL 373 (451)
Q Consensus 298 ~~~f~~~~~lG~G--~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 373 (451)
.++|+..+.||+| +||.||+|+.. +++.||||+++...... ....+.+|+.+++.++|||||++++++.+.+..++
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 103 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV 103 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence 3467778999999 99999999975 68999999996544322 23468889999999999999999999999999999
Q ss_pred EEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 374 VYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 374 v~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
||||+++|+|.+++..... ..+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+|++||
T Consensus 104 v~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~df 172 (389)
T 3gni_B 104 VTSFMAYGSAKDLICTHFM--DGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGL 172 (389)
T ss_dssp EEECCTTCBHHHHHHHTCT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCG
T ss_pred EEEccCCCCHHHHHhhhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEccc
Confidence 9999999999999987532 2389999999999999999999999 9999999999999999999999999
No 54
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=99.92 E-value=6.6e-25 Score=208.79 Aligned_cols=142 Identities=27% Similarity=0.441 Sum_probs=125.6
Q ss_pred hcCCCCCCccCccCCceEEEEEeCCCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEec
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 377 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey 377 (451)
.++|+..+.||+|+||.||+|++.++..||||+++.... ...++.+|+.++..++||||+++++++.+.+..++||||
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 100 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM--SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEY 100 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB--CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECC
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC--CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEec
Confidence 456777899999999999999998888999999975432 345789999999999999999999999999999999999
Q ss_pred CCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 378 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 378 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+++|+|.+++..... .+++.++..++.|++.||.|||+. +|+||||||+||+++.++.++++||
T Consensus 101 ~~~~~L~~~l~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Df 164 (283)
T 3gen_A 101 MANGCLLNYLREMRH---RFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDF 164 (283)
T ss_dssp CTTCBHHHHHHCGGG---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECST
T ss_pred cCCCcHHHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEccc
Confidence 999999999976432 389999999999999999999999 9999999999999999999999998
No 55
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=99.92 E-value=6e-25 Score=207.37 Aligned_cols=142 Identities=28% Similarity=0.444 Sum_probs=128.5
Q ss_pred hcCCCCCCccCccCCceEEEEEeCCCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEec
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 377 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey 377 (451)
.++|+..+.||+|+||.||+|+..++..||||+++.... ...++.+|+.++..++||||+++++++......++||||
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM--SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEY 84 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB--CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC--cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEc
Confidence 456777899999999999999998888999999965432 335689999999999999999999999999999999999
Q ss_pred CCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 378 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 378 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+++|+|.+++..... .+++.++..++.|++.||.|||+. +|+||||||+||+++.++.++++||
T Consensus 85 ~~~~~L~~~l~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Df 148 (268)
T 3sxs_A 85 ISNGCLLNYLRSHGK---GLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDF 148 (268)
T ss_dssp CTTCBHHHHHHHHGG---GCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCT
T ss_pred cCCCcHHHHHHHcCC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccC
Confidence 999999999986532 389999999999999999999999 9999999999999999999999998
No 56
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=99.92 E-value=9.9e-26 Score=221.97 Aligned_cols=154 Identities=29% Similarity=0.401 Sum_probs=131.3
Q ss_pred HHHHHHHhcCCCCCCccCccCCceEEEEEe------CCCCEEEEEEcccccccccHHHHHHHHHHHhcC-CCCCccceee
Q 013004 291 LRELQVATDGFSNKNILGRGGFGKVYKGRL------ADGKLVAVKRLKEERTSGGELQFQTEVKIISMA-VHRNLLRLYG 363 (451)
Q Consensus 291 ~~~~~~~~~~f~~~~~lG~G~fg~Vy~~~~------~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~ 363 (451)
..++....++|...+.||+|+||.||+|++ .+++.||||+++..........+.+|+.++..+ +||||+++++
T Consensus 14 ~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~ 93 (359)
T 3vhe_A 14 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG 93 (359)
T ss_dssp HHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred cccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeee
Confidence 444556678899999999999999999974 245789999997654444445799999999999 7999999999
Q ss_pred EEecCCe-eeEEEecCCCCChhHHhhccCCC-------------------------------------------------
Q 013004 364 FCTTVTE-KLLVYPYMTNGSVASRLRERQSS------------------------------------------------- 393 (451)
Q Consensus 364 ~~~~~~~-~~lv~ey~~~gsL~~~l~~~~~~------------------------------------------------- 393 (451)
++.+.+. .++||||+++|+|.+++......
T Consensus 94 ~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (359)
T 3vhe_A 94 ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSL 173 (359)
T ss_dssp EECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC--------------------------------------------
T ss_pred eeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccccccccc
Confidence 9987654 89999999999999999865321
Q ss_pred -------------CCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 394 -------------LPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 394 -------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+||
T Consensus 174 ~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Df 237 (359)
T 3vhe_A 174 SDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDF 237 (359)
T ss_dssp ----------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCC
T ss_pred chhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEec
Confidence 11288999999999999999999999 9999999999999999999999998
No 57
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=99.92 E-value=5e-25 Score=216.82 Aligned_cols=145 Identities=24% Similarity=0.330 Sum_probs=127.9
Q ss_pred HHhcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEccccc--ccccHHHHHHHHHHHhcC-CCCCccceeeEEecCCee
Q 013004 296 VATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEER--TSGGELQFQTEVKIISMA-VHRNLLRLYGFCTTVTEK 371 (451)
Q Consensus 296 ~~~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~ 371 (451)
...++|+..+.||+|+||+||+|+.. +++.||||+++... .......+.+|..++..+ +||||+++++++.+.+..
T Consensus 17 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~ 96 (353)
T 2i0e_A 17 MKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRL 96 (353)
T ss_dssp --CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEE
T ss_pred CchHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEE
Confidence 34577888999999999999999975 47899999996543 123344688999999887 799999999999999999
Q ss_pred eEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 372 LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 372 ~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
++||||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+||
T Consensus 97 ~lv~E~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DF 165 (353)
T 2i0e_A 97 YFVMEYVNGGDLMYHIQQVG----RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADF 165 (353)
T ss_dssp EEEEECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCC
T ss_pred EEEEeCCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeC
Confidence 99999999999999998653 389999999999999999999999 9999999999999999999999998
No 58
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=99.92 E-value=5.5e-25 Score=210.14 Aligned_cols=142 Identities=24% Similarity=0.452 Sum_probs=126.1
Q ss_pred cCCCCCCccCccCCceEEEEEeCCCCEEEEEEccccccc-ccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEec
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTS-GGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 377 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey 377 (451)
++|+..+.||+|+||.||+|+..+++.||+|+++..... .....+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 467778999999999999999888999999998654322 2234688999999999999999999999999999999999
Q ss_pred CCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 378 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 378 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+++ +|.+++..... .+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+|++||
T Consensus 82 ~~~-~l~~~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Df 144 (288)
T 1ob3_A 82 LDQ-DLKKLLDVCEG---GLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADF 144 (288)
T ss_dssp CSE-EHHHHHHTSTT---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCT
T ss_pred cCC-CHHHHHHhccc---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeEC
Confidence 985 99998876432 488999999999999999999999 9999999999999999999999998
No 59
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=99.92 E-value=3.5e-25 Score=217.85 Aligned_cols=146 Identities=20% Similarity=0.270 Sum_probs=126.1
Q ss_pred cCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccc----cccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeE
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT----SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLL 373 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~----~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 373 (451)
++|+..+.||+|+||.||+|+.. +++.||||+++.... ......+.+|+.++..++||||+++++++.+.+..++
T Consensus 24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l 103 (351)
T 3c0i_A 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYM 103 (351)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 45788899999999999999864 689999999854321 1134578999999999999999999999999999999
Q ss_pred EEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCC---ccchhh
Q 013004 374 VYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDAD---QSSKTI 447 (451)
Q Consensus 374 v~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~---~~i~df 447 (451)
||||+++|+|.+.+.........+++..+..++.|++.||.|||++ +|+||||||+|||++.++. +|++||
T Consensus 104 v~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vkl~Df 177 (351)
T 3c0i_A 104 VFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGF 177 (351)
T ss_dssp EEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEEECCC
T ss_pred EEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEEEecC
Confidence 9999999999988876433333589999999999999999999999 9999999999999987654 899998
No 60
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=99.92 E-value=3.3e-25 Score=214.18 Aligned_cols=147 Identities=29% Similarity=0.420 Sum_probs=128.3
Q ss_pred HHhcCCCCCCccCccCCceEEEEEeCCCCEEEEEEcccccccc-cHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEE
Q 013004 296 VATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLV 374 (451)
Q Consensus 296 ~~~~~f~~~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 374 (451)
...++|+..+.||+|+||.||+|+. +++.||||++....... ....+.+|+.+++.++||||+++++++......++|
T Consensus 34 i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 3p86_A 34 IPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIV 112 (309)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEE
T ss_pred CChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEE
Confidence 3456788889999999999999987 57899999986543222 234689999999999999999999999999999999
Q ss_pred EecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCC--eeecCCCCCceeeCCCCCccchhh
Q 013004 375 YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPK--IIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 375 ~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~--iiHrDlK~~NILld~~~~~~i~df 447 (451)
|||+++|+|.+++..... ...+++..+..++.|++.||+|||+. + |+||||||+|||++.++.+|++||
T Consensus 113 ~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~Df 183 (309)
T 3p86_A 113 TEYLSRGSLYRLLHKSGA-REQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVCDF 183 (309)
T ss_dssp EECCTTCBHHHHHHSTTH-HHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEECCC
T ss_pred EecCCCCcHHHHHhhcCC-CCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEECCC
Confidence 999999999999976421 12378999999999999999999998 6 999999999999999999999998
No 61
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=99.92 E-value=4.1e-25 Score=213.25 Aligned_cols=147 Identities=31% Similarity=0.447 Sum_probs=128.2
Q ss_pred hcCCCCCCccCccCCceEEEEEe------CCCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCee
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRL------ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEK 371 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~------~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 371 (451)
.++|...+.||+|+||.||+|+. .+++.||||.++..........+.+|+.+++.++||||+++++++...+..
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 101 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL 101 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCce
Confidence 45677789999999999999985 235789999997554433445789999999999999999999999999999
Q ss_pred eEEEecCCCCChhHHhhccCC--------------------CCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCC
Q 013004 372 LLVYPYMTNGSVASRLRERQS--------------------SLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKA 431 (451)
Q Consensus 372 ~lv~ey~~~gsL~~~l~~~~~--------------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~ 431 (451)
++||||+++|+|.+++..... ....+++.++..++.|++.||.|||++ +|+||||||
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dikp 178 (314)
T 2ivs_A 102 LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLAA 178 (314)
T ss_dssp EEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEECCCCSG
T ss_pred EEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCcccccch
Confidence 999999999999999987532 112378999999999999999999999 999999999
Q ss_pred CceeeCCCCCccchhh
Q 013004 432 ANILLDEDADQSSKTI 447 (451)
Q Consensus 432 ~NILld~~~~~~i~df 447 (451)
+||++++++.++++||
T Consensus 179 ~NIli~~~~~~kl~Df 194 (314)
T 2ivs_A 179 RNILVAEGRKMKISDF 194 (314)
T ss_dssp GGEEEETTTEEEECCC
T ss_pred heEEEcCCCCEEEccc
Confidence 9999999999999998
No 62
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=99.91 E-value=5e-25 Score=219.24 Aligned_cols=147 Identities=29% Similarity=0.423 Sum_probs=128.3
Q ss_pred hcCCCCCCccCccCCceEEEEEeC--------CCCEEEEEEcccccccccHHHHHHHHHHHhcC-CCCCccceeeEEecC
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLA--------DGKLVAVKRLKEERTSGGELQFQTEVKIISMA-VHRNLLRLYGFCTTV 368 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~--------~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~ 368 (451)
.++|...+.||+|+||.||+|+.. ++..||||+++..........+.+|+++++.+ +||||+++++++...
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 147 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 147 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence 356777889999999999999852 23579999997654444445789999999999 899999999999999
Q ss_pred CeeeEEEecCCCCChhHHhhccCCC------------CCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceee
Q 013004 369 TEKLLVYPYMTNGSVASRLRERQSS------------LPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILL 436 (451)
Q Consensus 369 ~~~~lv~ey~~~gsL~~~l~~~~~~------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILl 436 (451)
+..++||||+++|+|.+++...... ...+++.++..++.|++.||+|||+. +|+||||||+|||+
T Consensus 148 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll 224 (382)
T 3tt0_A 148 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLV 224 (382)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEE
T ss_pred CceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCcceEEE
Confidence 9999999999999999999875421 23589999999999999999999999 99999999999999
Q ss_pred CCCCCccchhh
Q 013004 437 DEDADQSSKTI 447 (451)
Q Consensus 437 d~~~~~~i~df 447 (451)
+.++.+||+||
T Consensus 225 ~~~~~~kL~DF 235 (382)
T 3tt0_A 225 TEDNVMKIADF 235 (382)
T ss_dssp CTTCCEEECSC
T ss_pred cCCCcEEEccc
Confidence 99999999998
No 63
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=99.91 E-value=1.3e-24 Score=211.04 Aligned_cols=142 Identities=21% Similarity=0.324 Sum_probs=126.2
Q ss_pred hcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEe
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 376 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 376 (451)
.++|...+.||+|+||.||+|+.. +++.||+|.++... .....+.+|+.++..++||||+++++++.+.+..++|||
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 81 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG--TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFE 81 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT--HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEEC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc--ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEE
Confidence 356788899999999999999875 58899999986432 233468899999999999999999999999999999999
Q ss_pred cCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCC--CCCccchhh
Q 013004 377 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDE--DADQSSKTI 447 (451)
Q Consensus 377 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~--~~~~~i~df 447 (451)
|+++|+|.+++.... ..+++.++..++.|++.||.|||+. +|+||||||+|||++. ++.+|++||
T Consensus 82 ~~~g~~L~~~l~~~~---~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Df 148 (321)
T 1tki_A 82 FISGLDIFERINTSA---FELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEF 148 (321)
T ss_dssp CCCCCBHHHHHTSSS---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCC
T ss_pred eCCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEEC
Confidence 999999999997643 2489999999999999999999999 9999999999999997 789999998
No 64
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=99.91 E-value=1e-24 Score=211.46 Aligned_cols=145 Identities=23% Similarity=0.329 Sum_probs=126.9
Q ss_pred cCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCC--eeeEEE
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVT--EKLLVY 375 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~--~~~lv~ 375 (451)
++|...+.||+|+||+||+|+.. +++.||||+++..........+.+|+.+++.++||||+++++++.... ..++||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence 45777899999999999999975 589999999976554444567889999999999999999999988755 679999
Q ss_pred ecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceee----CCCCCccchhh
Q 013004 376 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILL----DEDADQSSKTI 447 (451)
Q Consensus 376 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILl----d~~~~~~i~df 447 (451)
||+++|+|.+++..... ...+++.++..++.|++.||+|||+. +|+||||||+|||+ +.++.+||+||
T Consensus 89 e~~~~~~L~~~l~~~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Df 160 (319)
T 4euu_A 89 EFCPCGSLYTVLEEPSN-AYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDF 160 (319)
T ss_dssp ECCTTCBHHHHHHSGGG-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCC
T ss_pred eCCCCCCHHHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccC
Confidence 99999999999987532 22389999999999999999999999 99999999999999 77788999998
No 65
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=99.91 E-value=6.9e-25 Score=225.60 Aligned_cols=144 Identities=28% Similarity=0.412 Sum_probs=128.9
Q ss_pred HhcCCCCCCccCccCCceEEEEEeCC-CCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEE
Q 013004 297 ATDGFSNKNILGRGGFGKVYKGRLAD-GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 375 (451)
Q Consensus 297 ~~~~f~~~~~lG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (451)
..++|+..+.||+|+||.||+|++.. ++.||||.++... ....+|.+|+.+++.++|||||+++++|......++||
T Consensus 218 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 295 (495)
T 1opk_A 218 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT--MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 295 (495)
T ss_dssp CGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS--SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred CHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc--cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEE
Confidence 34567778999999999999999764 7899999997543 23457999999999999999999999999999999999
Q ss_pred ecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 376 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 376 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
||+++|+|.++++.... ..+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+||
T Consensus 296 E~~~~g~L~~~l~~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DF 362 (495)
T 1opk_A 296 EFMTYGNLLDYLRECNR--QEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADF 362 (495)
T ss_dssp ECCTTCBHHHHHHHSCT--TTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCT
T ss_pred EccCCCCHHHHHHhcCc--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeec
Confidence 99999999999986432 2489999999999999999999999 9999999999999999999999998
No 66
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=99.91 E-value=7.7e-25 Score=208.90 Aligned_cols=146 Identities=21% Similarity=0.323 Sum_probs=128.3
Q ss_pred cCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEec
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 377 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey 377 (451)
++|...+.||+|+||.||+|+.. +++.||+|++...........+.+|+.+++.++||||+++++++.+....++||||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 101 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMET 101 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEe
Confidence 45777899999999999999874 58899999997665554556799999999999999999999999999999999999
Q ss_pred CCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeC---CCCCccchhh
Q 013004 378 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLD---EDADQSSKTI 447 (451)
Q Consensus 378 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld---~~~~~~i~df 447 (451)
+++|+|.+.+.........+++..+..++.|++.||+|||+. +|+||||||+||+++ .++.++++||
T Consensus 102 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Df 171 (285)
T 3is5_A 102 CEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDF 171 (285)
T ss_dssp CSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCC
T ss_pred CCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEee
Confidence 999999999865422223589999999999999999999999 999999999999995 4578999998
No 67
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=99.91 E-value=5.6e-25 Score=223.95 Aligned_cols=144 Identities=23% Similarity=0.381 Sum_probs=127.4
Q ss_pred HHhcCCCCCCccCccCCceEEEEEeCCCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEE
Q 013004 296 VATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 375 (451)
Q Consensus 296 ~~~~~f~~~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (451)
...++|+..+.||+|+||+||+|.+.++..||||+++... .....|.+|+.+++.++|||||++++++. .+..++||
T Consensus 185 i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~ 261 (454)
T 1qcf_A 185 IPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS--MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIIT 261 (454)
T ss_dssp CCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS--BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEE
T ss_pred echHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC--ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEE
Confidence 3456677889999999999999999888899999997543 23557999999999999999999999986 56789999
Q ss_pred ecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 376 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 376 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
||+++|+|.++++.... ..+++.++..++.|++.||+|||++ +|+||||||+|||++.++.+||+||
T Consensus 262 e~~~~g~L~~~l~~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DF 328 (454)
T 1qcf_A 262 EFMAKGSLLDFLKSDEG--SKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADF 328 (454)
T ss_dssp CCCTTCBHHHHHHSHHH--HTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECST
T ss_pred eecCCCcHHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeC
Confidence 99999999999985421 1378899999999999999999999 9999999999999999999999998
No 68
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=99.91 E-value=1.4e-24 Score=207.71 Aligned_cols=142 Identities=20% Similarity=0.412 Sum_probs=124.0
Q ss_pred cCCCCCCccCccCCceEEEEEeC-CCCEEEEEEccccccccc-HHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEe
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGG-ELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 376 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~-~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 376 (451)
++|+..+.||+|+||+||+|+.. +++.||||+++....... ...+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 46778899999999999999975 689999999965443322 3468899999999999999999999999999999999
Q ss_pred cCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 377 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 377 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|+++ ++.+.+..... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+|++||
T Consensus 82 ~~~~-~l~~~~~~~~~---~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Df 145 (292)
T 3o0g_A 82 FCDQ-DLKKYFDSCNG---DLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANF 145 (292)
T ss_dssp CCSE-EHHHHHHHTTT---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCC
T ss_pred cCCC-CHHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeec
Confidence 9985 66666654322 489999999999999999999999 9999999999999999999999998
No 69
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=99.91 E-value=1e-24 Score=208.35 Aligned_cols=140 Identities=10% Similarity=-0.024 Sum_probs=122.3
Q ss_pred cCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccc--cHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEE
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSG--GELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 375 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (451)
++|+..+.||+|+||.||+|+.. +++.||||.++...... ....+.+|+..+..++||||+++++++...+..|+||
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 110 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA 110 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence 45777889999999999999975 48999999997654322 2247899999999999999999999999999999999
Q ss_pred ecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 376 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 376 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
||+++++|.+++... ....+...++.|++.||+|||++ +|+||||||+|||+++++.++++++
T Consensus 111 e~~~g~~L~~~l~~~------~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~ 173 (286)
T 3uqc_A 111 EWIRGGSLQEVADTS------PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYP 173 (286)
T ss_dssp ECCCEEEHHHHHTTC------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSC
T ss_pred EecCCCCHHHHHhcC------CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEec
Confidence 999999999999542 34557888999999999999999 9999999999999999999988754
No 70
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=99.91 E-value=1.5e-24 Score=214.17 Aligned_cols=141 Identities=24% Similarity=0.286 Sum_probs=126.0
Q ss_pred hcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEe
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 376 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 376 (451)
.++|...+.||+|+||.||+|+.. +++.||||++..... ....+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 96 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA--IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIME 96 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT--SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc--ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEE
Confidence 356788899999999999999975 689999999865332 23468899999999999999999999999999999999
Q ss_pred cCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCC--ccchhh
Q 013004 377 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDAD--QSSKTI 447 (451)
Q Consensus 377 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~--~~i~df 447 (451)
|+++|+|.+++.... .+++..+..++.|++.||.|||++ +|+||||||+|||++.++. +||+||
T Consensus 97 ~~~~~~L~~~l~~~~----~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Df 162 (361)
T 3uc3_A 97 YASGGELYERICNAG----RFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDF 162 (361)
T ss_dssp CCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCC
T ss_pred eCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeec
Confidence 999999999997654 389999999999999999999999 9999999999999998765 899998
No 71
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=99.91 E-value=6.2e-25 Score=213.38 Aligned_cols=142 Identities=30% Similarity=0.438 Sum_probs=123.3
Q ss_pred hcCCCCCCccCccCCceEEEEEeCCCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCC----eeeE
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVT----EKLL 373 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~----~~~l 373 (451)
.++|+..+.||+|+||+||+|++. ++.||||+++... .....+.+|+.++..++|||||++++++.... ..++
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~l 99 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD--KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWL 99 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG--HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc--hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEE
Confidence 456788899999999999999985 7899999986432 22335677999999999999999999998744 3699
Q ss_pred EEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcC-------CCCCeeecCCCCCceeeCCCCCccchh
Q 013004 374 VYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEH-------CDPKIIHRDVKAANILLDEDADQSSKT 446 (451)
Q Consensus 374 v~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~-------~~~~iiHrDlK~~NILld~~~~~~i~d 446 (451)
||||+++|+|.+++... .++|..+..++.|++.||+|||+. +.++|+||||||+|||++.++.+||+|
T Consensus 100 v~e~~~~g~L~~~l~~~-----~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~D 174 (322)
T 3soc_A 100 ITAFHEKGSLSDFLKAN-----VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIAD 174 (322)
T ss_dssp EEECCTTCBHHHHHHHC-----CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECC
T ss_pred EEecCCCCCHHHHHHhc-----CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEcc
Confidence 99999999999999764 289999999999999999999986 244899999999999999999999999
Q ss_pred h
Q 013004 447 I 447 (451)
Q Consensus 447 f 447 (451)
|
T Consensus 175 F 175 (322)
T 3soc_A 175 F 175 (322)
T ss_dssp C
T ss_pred C
Confidence 8
No 72
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=99.91 E-value=1.3e-24 Score=220.93 Aligned_cols=142 Identities=28% Similarity=0.448 Sum_probs=126.3
Q ss_pred HhcCCCCCCccCccCCceEEEEEeCCCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCC-eeeEEE
Q 013004 297 ATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVT-EKLLVY 375 (451)
Q Consensus 297 ~~~~f~~~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~~lv~ 375 (451)
..++|+..+.||+|+||.||+|.+. ++.||||.++... ....|.+|+.+++.++|||||++++++.... ..++||
T Consensus 191 ~~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~ 266 (450)
T 1k9a_A 191 NMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA---TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 266 (450)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT---TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEE
T ss_pred ChHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch---HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEE
Confidence 3466778899999999999999985 7799999997543 3357999999999999999999999987765 789999
Q ss_pred ecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 376 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 376 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
||+++|+|.++++.... ..+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+||
T Consensus 267 e~~~~g~L~~~l~~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~Df 333 (450)
T 1k9a_A 267 EYMAKGSLVDYLRSRGR--SVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDF 333 (450)
T ss_dssp ECCTTCBHHHHHHHHCT--TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCC
T ss_pred EecCCCcHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeC
Confidence 99999999999987543 2378999999999999999999999 9999999999999999999999998
No 73
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=99.91 E-value=8.8e-25 Score=209.70 Aligned_cols=142 Identities=25% Similarity=0.381 Sum_probs=119.9
Q ss_pred hcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEccccccc-------------------------ccHHHHHHHHHHHh
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS-------------------------GGELQFQTEVKIIS 351 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~-------------------------~~~~~~~~E~~~l~ 351 (451)
.++|+..+.||+|+||.||+|+.. +++.||||+++..... .....+.+|+.+++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 356888899999999999999864 6889999998643211 11236889999999
Q ss_pred cCCCCCccceeeEEec--CCeeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCC
Q 013004 352 MAVHRNLLRLYGFCTT--VTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDV 429 (451)
Q Consensus 352 ~l~H~niv~l~~~~~~--~~~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDl 429 (451)
.++||||+++++++.. ....++||||+++|+|.+++.. ..+++.++..++.|++.||+|||+. +|+||||
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dl 163 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL-----KPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDI 163 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS-----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCC
Confidence 9999999999999986 5678999999999999876533 2489999999999999999999999 9999999
Q ss_pred CCCceeeCCCCCccchhh
Q 013004 430 KAANILLDEDADQSSKTI 447 (451)
Q Consensus 430 K~~NILld~~~~~~i~df 447 (451)
||+|||++.++.+|++||
T Consensus 164 kp~Nil~~~~~~~kl~Df 181 (298)
T 2zv2_A 164 KPSNLLVGEDGHIKIADF 181 (298)
T ss_dssp CGGGEEECTTSCEEECCC
T ss_pred CHHHEEECCCCCEEEecC
Confidence 999999999999999998
No 74
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=99.91 E-value=1.8e-24 Score=210.51 Aligned_cols=142 Identities=26% Similarity=0.343 Sum_probs=126.2
Q ss_pred cCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccc-----cHHHHHHHHHHHhcCCCCCccceeeEEecCCeee
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSG-----GELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKL 372 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~-----~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 372 (451)
+.|...+.||+|+||.||+|+.. +++.||+|.++...... ....+.+|+.++..++||||+++++++.+....+
T Consensus 11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 90 (326)
T 2y0a_A 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI 90 (326)
T ss_dssp HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 45777899999999999999975 68999999986543221 2457899999999999999999999999999999
Q ss_pred EEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCC----Cccchhh
Q 013004 373 LVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDA----DQSSKTI 447 (451)
Q Consensus 373 lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~----~~~i~df 447 (451)
+||||+++|+|.+++.... .+++.++..++.|++.||.|||+. +|+||||||+|||++.++ .+|++||
T Consensus 91 lv~e~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Df 162 (326)
T 2y0a_A 91 LILELVAGGELFDFLAEKE----SLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDF 162 (326)
T ss_dssp EEEECCCSCBHHHHHTTSS----CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCEEECCC
T ss_pred EEEEcCCCCCHHHHHHhcC----CcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCEEEEEC
Confidence 9999999999999997643 489999999999999999999999 999999999999999887 7899998
No 75
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=99.91 E-value=1.3e-24 Score=225.30 Aligned_cols=146 Identities=27% Similarity=0.374 Sum_probs=129.4
Q ss_pred HhcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEccccc--ccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeE
Q 013004 297 ATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEER--TSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLL 373 (451)
Q Consensus 297 ~~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 373 (451)
..++|...++||+|+||+||+|+.. +|+.||||+++... .......+.+|+.++..++|||||++++++.+.+..++
T Consensus 182 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~l 261 (576)
T 2acx_A 182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCL 261 (576)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred cccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEE
Confidence 3466888899999999999999975 68999999986542 22334468899999999999999999999999999999
Q ss_pred EEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 374 VYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 374 v~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
||||+++|+|.+++..... ..+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+||
T Consensus 262 VmEy~~gg~L~~~l~~~~~--~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DF 330 (576)
T 2acx_A 262 VLTLMNGGDLKFHIYHMGQ--AGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDL 330 (576)
T ss_dssp EECCCCSCBHHHHHHSSSS--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCC
T ss_pred EEEcCCCCcHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEec
Confidence 9999999999999976532 2489999999999999999999999 9999999999999999999999998
No 76
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=99.91 E-value=9.1e-25 Score=213.47 Aligned_cols=141 Identities=25% Similarity=0.434 Sum_probs=125.9
Q ss_pred cCCCCCCccCccCCceEEEEEe-CCCCEEEEEEcccccc--cccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEE
Q 013004 299 DGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERT--SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 375 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (451)
++|...+.||+|+||+||+|+. .+++.||||++..... ......+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 88 (336)
T 3h4j_B 9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVI 88 (336)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 5677889999999999999996 5789999999864321 222346899999999999999999999999999999999
Q ss_pred ecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 376 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 376 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
||+ +|+|.+++.... .+++.++..++.|++.||.|||+. +|+||||||+|||+++++.+|++||
T Consensus 89 E~~-~g~l~~~l~~~~----~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DF 152 (336)
T 3h4j_B 89 EYA-GGELFDYIVEKK----RMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADF 152 (336)
T ss_dssp CCC-CEEHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCS
T ss_pred ECC-CCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEe
Confidence 999 789999987654 389999999999999999999999 9999999999999999999999998
No 77
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=99.91 E-value=1.6e-24 Score=223.97 Aligned_cols=147 Identities=31% Similarity=0.440 Sum_probs=130.6
Q ss_pred hcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccc--cccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEE
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLV 374 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 374 (451)
.++|...++||+|+||+||+|+.. +|+.||||+++.... ......+.+|+.++..++||||+++++++.+....++|
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 263 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV 263 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence 366888899999999999999975 689999999965432 22345688999999999999999999999999999999
Q ss_pred EecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 375 YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 375 ~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|||+++|+|.+++.........+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+||
T Consensus 264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DF 333 (543)
T 3c4z_A 264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDL 333 (543)
T ss_dssp ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCC
T ss_pred EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeec
Confidence 999999999999987544344689999999999999999999999 9999999999999999999999998
No 78
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=99.91 E-value=1.1e-24 Score=205.53 Aligned_cols=146 Identities=26% Similarity=0.386 Sum_probs=125.8
Q ss_pred hcCCCCCCccCccCCceEEEEEeCCCCEEEEEEccccccc-ccHHHHHHHHHHHhcCCCCCccceeeEEecC--CeeeEE
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTS-GGELQFQTEVKIISMAVHRNLLRLYGFCTTV--TEKLLV 374 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~lv 374 (451)
.++|+..+.||+|+||.||+|++. ++.||||+++..... .....+.+|+.++..++||||+++++++.+. ...++|
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLI 87 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEE
T ss_pred HHHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEee
Confidence 356778899999999999999985 889999998754322 2234699999999999999999999999887 778999
Q ss_pred EecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 375 YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 375 ~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|||+++|+|.+++..... ..+++.++..++.|++.||.|||+. +++|+||||||+||+++.++.+++.||
T Consensus 88 ~e~~~~~~L~~~l~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~-~~~i~H~dikp~Nil~~~~~~~~l~~~ 157 (271)
T 3kmu_A 88 THWMPYGSLYNVLHEGTN--FVVDQSQAVKFALDMARGMAFLHTL-EPLIPRHALNSRSVMIDEDMTARISMA 157 (271)
T ss_dssp EECCTTCBHHHHHHSCSS--CCCCHHHHHHHHHHHHHHHHHHTTS-SSCCTTCCCSGGGEEECTTSCEEEEGG
T ss_pred ecccCCCcHHHHHhhccc--CCCCHHHHHHHHHHHHHHHHHHhcC-CCceecCCCccceEEEcCCcceeEEec
Confidence 999999999999986532 2489999999999999999999998 223999999999999999999888765
No 79
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=99.91 E-value=1.4e-24 Score=211.98 Aligned_cols=147 Identities=28% Similarity=0.460 Sum_probs=127.4
Q ss_pred hcCCCCCCccCccCCceEEEEEeC--------CCCEEEEEEcccccccccHHHHHHHHHHHhcC-CCCCccceeeEEecC
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLA--------DGKLVAVKRLKEERTSGGELQFQTEVKIISMA-VHRNLLRLYGFCTTV 368 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~--------~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~ 368 (451)
.++|...+.||+|+||.||+|+.. +++.||||+++..........+.+|+.++..+ +||||+++++++...
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 113 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 113 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence 467888899999999999999863 46789999997654333445789999999999 899999999999999
Q ss_pred CeeeEEEecCCCCChhHHhhccCCC------------CCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceee
Q 013004 369 TEKLLVYPYMTNGSVASRLRERQSS------------LPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILL 436 (451)
Q Consensus 369 ~~~~lv~ey~~~gsL~~~l~~~~~~------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILl 436 (451)
+..++||||+++|+|.+++...... ...+++.++..++.|++.||.|||+. +|+||||||+||++
T Consensus 114 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll 190 (334)
T 2pvf_A 114 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLV 190 (334)
T ss_dssp SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEE
T ss_pred CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCccceEEE
Confidence 9999999999999999999865321 12488999999999999999999999 99999999999999
Q ss_pred CCCCCccchhh
Q 013004 437 DEDADQSSKTI 447 (451)
Q Consensus 437 d~~~~~~i~df 447 (451)
+.++.+|++||
T Consensus 191 ~~~~~~kL~Df 201 (334)
T 2pvf_A 191 TENNVMKIADF 201 (334)
T ss_dssp CTTCCEEECCC
T ss_pred cCCCCEEEccc
Confidence 99999999998
No 80
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=99.91 E-value=7.8e-25 Score=216.97 Aligned_cols=142 Identities=27% Similarity=0.360 Sum_probs=118.3
Q ss_pred cCCCCCCccCccCCceEEEEEeC-CCCEEEEEEccccccc--ccHHHHHHHHHH-HhcCCCCCccceeeEEecCCeeeEE
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS--GGELQFQTEVKI-ISMAVHRNLLRLYGFCTTVTEKLLV 374 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~--~~~~~~~~E~~~-l~~l~H~niv~l~~~~~~~~~~~lv 374 (451)
++|+..+.||+|+||+||+|+.+ +++.||||+++..... .....+.+|..+ ++.++||||+++++++.+.+..|+|
T Consensus 38 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv 117 (373)
T 2r5t_A 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFV 117 (373)
T ss_dssp GGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEE
Confidence 56788899999999999999975 5889999999654322 223356677766 5778999999999999999999999
Q ss_pred EecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 375 YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 375 ~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+||
T Consensus 118 ~E~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DF 183 (373)
T 2r5t_A 118 LDYINGGELFYHLQRER----CFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDF 183 (373)
T ss_dssp EECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC
T ss_pred EeCCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeC
Confidence 99999999999998753 378999999999999999999999 9999999999999999999999998
No 81
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=99.91 E-value=1.2e-24 Score=208.93 Aligned_cols=142 Identities=27% Similarity=0.451 Sum_probs=122.8
Q ss_pred CCCCCCccCccCCceEEEEEe-----CCCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecC--Ceee
Q 013004 300 GFSNKNILGRGGFGKVYKGRL-----ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTV--TEKL 372 (451)
Q Consensus 300 ~f~~~~~lG~G~fg~Vy~~~~-----~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~ 372 (451)
.|+..+.||+|+||.||+|++ .+++.||||+++..........+.+|+.++..++||||+++++++... ...+
T Consensus 22 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 101 (302)
T 4e5w_A 22 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIK 101 (302)
T ss_dssp GEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEE
T ss_pred hhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEE
Confidence 466778999999999999984 357899999997655444556799999999999999999999999876 6689
Q ss_pred EEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 373 LVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 373 lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+||||+++|+|.+++..... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++.++++||
T Consensus 102 lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Df 170 (302)
T 4e5w_A 102 LIMEFLPSGSLKEYLPKNKN---KINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDF 170 (302)
T ss_dssp EEEECCTTCBHHHHHHHHTT---TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCC
T ss_pred EEEEeCCCCcHHHHHHhccc---cCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECcc
Confidence 99999999999999966532 389999999999999999999999 9999999999999999999999998
No 82
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=99.91 E-value=1.6e-24 Score=214.04 Aligned_cols=144 Identities=22% Similarity=0.313 Sum_probs=126.6
Q ss_pred HhcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEccccccc-ccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEE
Q 013004 297 ATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS-GGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLV 374 (451)
Q Consensus 297 ~~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 374 (451)
..++|+..+.||+|+||.||+|... +++.||+|+++..... .....+.+|+.++..++||||+++++++.+.+..++|
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv 106 (362)
T 2bdw_A 27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 106 (362)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 3467888899999999999999874 6899999998654322 2234688999999999999999999999999999999
Q ss_pred EecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCC---Cccchhh
Q 013004 375 YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDA---DQSSKTI 447 (451)
Q Consensus 375 ~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~---~~~i~df 447 (451)
|||+++|+|.+.+.... .+++.++..++.|++.||.|||+. +|+||||||+|||++.++ .+|++||
T Consensus 107 ~e~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Df 175 (362)
T 2bdw_A 107 FDLVTGGELFEDIVARE----FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADF 175 (362)
T ss_dssp ECCCCSCBHHHHHTTCS----CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECCC
T ss_pred EecCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEeec
Confidence 99999999999997643 389999999999999999999999 999999999999998764 4899998
No 83
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=99.91 E-value=1.6e-24 Score=221.17 Aligned_cols=142 Identities=25% Similarity=0.447 Sum_probs=127.4
Q ss_pred cCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccc--cccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEE
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 375 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (451)
++|...+.||+|+||+||+|+.. +|+.||||+++.... .+....+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 95 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM 95 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 56777899999999999999975 789999999865432 123346899999999999999999999999999999999
Q ss_pred ecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 376 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 376 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+||
T Consensus 96 E~~~gg~L~~~l~~~~----~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DF 160 (476)
T 2y94_A 96 EYVSGGELFDYICKNG----RLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADF 160 (476)
T ss_dssp ECCSSEEHHHHTTSSS----SCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCC
T ss_pred eCCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEec
Confidence 9999999999997643 489999999999999999999999 9999999999999999999999998
No 84
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=99.91 E-value=9.9e-25 Score=213.63 Aligned_cols=149 Identities=27% Similarity=0.426 Sum_probs=126.3
Q ss_pred HHhcCCCCCCccCccCCceEEEEEe------CCCCEEEEEEcccccccccHHHHHHHHHHHhcC-CCCCccceeeEEecC
Q 013004 296 VATDGFSNKNILGRGGFGKVYKGRL------ADGKLVAVKRLKEERTSGGELQFQTEVKIISMA-VHRNLLRLYGFCTTV 368 (451)
Q Consensus 296 ~~~~~f~~~~~lG~G~fg~Vy~~~~------~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~ 368 (451)
...++|...+.||+|+||.||+|+. .+++.||||.++..........+.+|+.++..+ +||||+++++++...
T Consensus 42 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 121 (344)
T 1rjb_A 42 FPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLS 121 (344)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred cCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeC
Confidence 3456788889999999999999985 235689999997544333445799999999999 899999999999999
Q ss_pred CeeeEEEecCCCCChhHHhhccCCC-------------------CCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCC
Q 013004 369 TEKLLVYPYMTNGSVASRLRERQSS-------------------LPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDV 429 (451)
Q Consensus 369 ~~~~lv~ey~~~gsL~~~l~~~~~~-------------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDl 429 (451)
+..++||||+++|+|.+++...... ...+++..+..++.|++.||+|||+. +|+||||
T Consensus 122 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Di 198 (344)
T 1rjb_A 122 GPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDL 198 (344)
T ss_dssp SSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEETTC
T ss_pred CccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCC
Confidence 9999999999999999999865321 12378999999999999999999999 9999999
Q ss_pred CCCceeeCCCCCccchhh
Q 013004 430 KAANILLDEDADQSSKTI 447 (451)
Q Consensus 430 K~~NILld~~~~~~i~df 447 (451)
||+|||++.++.++++||
T Consensus 199 kp~NIll~~~~~~kL~Df 216 (344)
T 1rjb_A 199 AARNVLVTHGKVVKICDF 216 (344)
T ss_dssp SGGGEEEETTTEEEECCC
T ss_pred ChhhEEEcCCCcEEeCCC
Confidence 999999999999999998
No 85
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=99.91 E-value=5.9e-25 Score=223.26 Aligned_cols=143 Identities=25% Similarity=0.335 Sum_probs=119.7
Q ss_pred hcCCCCCCccCccCCceEEEEEe-CCCCEEEEEEccccc--ccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEE
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEER--TSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLV 374 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 374 (451)
.++|+..+.||+|+||.||+|+. .+++.||||+++... .......+.+|+.+++.++||||+++++++...+..++|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 46688889999999999999986 468999999996542 222234678999999999999999999999999999999
Q ss_pred EecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhc-CCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 375 YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHE-HCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 375 ~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~-~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|||+++|+|.+++.... .+++..+..++.|++.||+|||+ . +|+||||||+|||++.++.+||+||
T Consensus 227 ~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DF 293 (446)
T 4ejn_A 227 MEYANGGELFFHLSRER----VFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDF 293 (446)
T ss_dssp ECCCSSCBHHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCC
T ss_pred EeeCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccC
Confidence 99999999999997653 38999999999999999999998 7 8999999999999999999999998
No 86
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=99.91 E-value=5.1e-25 Score=212.85 Aligned_cols=143 Identities=24% Similarity=0.371 Sum_probs=125.3
Q ss_pred hcCCCCCCccCccCCceEEEEEe-CCCCEEEEEEccccccccc--HHHHHHHHHHHhcCCCCCccceeeEEecCCe----
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGG--ELQFQTEVKIISMAVHRNLLRLYGFCTTVTE---- 370 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~---- 370 (451)
.++|+..+.||+|+||.||+|+. .+++.||||+++....... ...+.+|+.++..++||||+++++++.....
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 35688889999999999999996 5689999999976433222 3468899999999999999999999876543
Q ss_pred eeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 371 KLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 371 ~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
.++||||+++|+|.+++.... .+++.++..++.|++.||+|||++ +|+||||||+|||++.++.+||+||
T Consensus 91 ~~lv~e~~~g~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Df 160 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHTEG----PMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDF 160 (311)
T ss_dssp EEEEEECCCEEEHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCC
T ss_pred cEEEEecCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeec
Confidence 399999999999999998653 389999999999999999999999 9999999999999999999999998
No 87
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=99.91 E-value=1.1e-24 Score=215.43 Aligned_cols=144 Identities=16% Similarity=0.248 Sum_probs=124.1
Q ss_pred HhcCCCCCCccCccCCceEEEEE------eCCCCEEEEEEcccccccccHHHHHHHHHHHhcCC---CCCccceeeEEec
Q 013004 297 ATDGFSNKNILGRGGFGKVYKGR------LADGKLVAVKRLKEERTSGGELQFQTEVKIISMAV---HRNLLRLYGFCTT 367 (451)
Q Consensus 297 ~~~~f~~~~~lG~G~fg~Vy~~~------~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~---H~niv~l~~~~~~ 367 (451)
..++|...+.||+|+||.||+|. ..+++.||||+++.. ...++.+|+.++..++ |+||+++++++..
T Consensus 63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~ 138 (365)
T 3e7e_A 63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA----NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLF 138 (365)
T ss_dssp SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC----CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEEC
T ss_pred CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC----ChhHHHHHHHHHHHhhhhhhhhhhhhheeeec
Confidence 34668888999999999999994 346889999998643 2346788888888777 9999999999999
Q ss_pred CCeeeEEEecCCCCChhHHhhccCC-CCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCC--------
Q 013004 368 VTEKLLVYPYMTNGSVASRLRERQS-SLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDE-------- 438 (451)
Q Consensus 368 ~~~~~lv~ey~~~gsL~~~l~~~~~-~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~-------- 438 (451)
.+..++||||+++|+|.+++..... ....++|..+..++.|++.||+|||++ +|+||||||+|||++.
T Consensus 139 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~~~~~~ 215 (365)
T 3e7e_A 139 QNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLEQDDE 215 (365)
T ss_dssp SSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGTCC---
T ss_pred CCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccccCcccc
Confidence 9999999999999999999975321 123589999999999999999999998 9999999999999998
Q ss_pred ---CCCccchhh
Q 013004 439 ---DADQSSKTI 447 (451)
Q Consensus 439 ---~~~~~i~df 447 (451)
++.+||+||
T Consensus 216 ~~~~~~~kl~DF 227 (365)
T 3e7e_A 216 DDLSAGLALIDL 227 (365)
T ss_dssp ---CTTEEECCC
T ss_pred ccccCCEEEeeC
Confidence 899999998
No 88
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=99.91 E-value=1.4e-24 Score=206.51 Aligned_cols=140 Identities=26% Similarity=0.416 Sum_probs=119.5
Q ss_pred hcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEccccccc-ccHHHHHHHHHHHhcC-CCCCccceeeEEecCCeeeEE
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS-GGELQFQTEVKIISMA-VHRNLLRLYGFCTTVTEKLLV 374 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~-~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv 374 (451)
.++|+..+.||+|+||.||+|+.. +++.||||+++..... ....++.+|+..+..+ +||||+++++++.+.+..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv 89 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ 89 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence 456888899999999999999975 6899999998654322 2344788999999888 899999999999999999999
Q ss_pred EecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCC
Q 013004 375 YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDA 440 (451)
Q Consensus 375 ~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~ 440 (451)
|||+++|+|.+++.........+++.++..++.|++.||.|||++ +|+||||||+||+++.++
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~ 152 (289)
T 1x8b_A 90 NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTS 152 (289)
T ss_dssp EECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC---
T ss_pred EEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCC
Confidence 999999999999986532223489999999999999999999999 999999999999999544
No 89
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=99.91 E-value=7.3e-25 Score=212.46 Aligned_cols=152 Identities=28% Similarity=0.439 Sum_probs=130.9
Q ss_pred HHHHHhcCCCCCCccCccCCceEEEEEeC------CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEe
Q 013004 293 ELQVATDGFSNKNILGRGGFGKVYKGRLA------DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCT 366 (451)
Q Consensus 293 ~~~~~~~~f~~~~~lG~G~fg~Vy~~~~~------~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~ 366 (451)
++....++|+..+.||+|+||.||+|+.. +++.||||.++..........+.+|+.+++.++||||+++++++.
T Consensus 19 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~ 98 (322)
T 1p4o_A 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS 98 (322)
T ss_dssp TTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEEC
T ss_pred hhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEc
Confidence 33445677888899999999999999754 367899999975443334457899999999999999999999999
Q ss_pred cCCeeeEEEecCCCCChhHHhhccC------CCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCC
Q 013004 367 TVTEKLLVYPYMTNGSVASRLRERQ------SSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDA 440 (451)
Q Consensus 367 ~~~~~~lv~ey~~~gsL~~~l~~~~------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~ 440 (451)
+.+..++||||+++|+|.+++.... .....+++..+..++.|++.||.|||++ +|+||||||+||+++.++
T Consensus 99 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIli~~~~ 175 (322)
T 1p4o_A 99 QGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDF 175 (322)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEECTTC
T ss_pred cCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEEEcCCC
Confidence 9999999999999999999997532 1123478999999999999999999999 999999999999999999
Q ss_pred Cccchhh
Q 013004 441 DQSSKTI 447 (451)
Q Consensus 441 ~~~i~df 447 (451)
.+|++||
T Consensus 176 ~~kl~Df 182 (322)
T 1p4o_A 176 TVKIGDF 182 (322)
T ss_dssp CEEECCT
T ss_pred eEEECcC
Confidence 9999998
No 90
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=99.91 E-value=1.4e-24 Score=211.35 Aligned_cols=142 Identities=27% Similarity=0.487 Sum_probs=119.3
Q ss_pred cCCCCCCccCccCCceEEEEEeC-CCC----EEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeE
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA-DGK----LVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLL 373 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~-~~~----~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 373 (451)
++|+..+.||+|+||.||+|++. +++ .||+|.++..........|.+|+.+++.++||||+++++++.+.. .++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~ 93 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL 93 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEE
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEE
Confidence 45777899999999999999864 444 368888865544445567999999999999999999999998754 789
Q ss_pred EEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 374 VYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 374 v~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
++||+++|+|.+++..... .+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+||
T Consensus 94 v~e~~~~g~L~~~l~~~~~---~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Df 161 (327)
T 3poz_A 94 ITQLMPFGCLLDYVREHKD---NIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDF 161 (327)
T ss_dssp EEECCTTCBHHHHHHHSTT---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCT
T ss_pred EEEecCCCcHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccC
Confidence 9999999999999987543 489999999999999999999999 9999999999999999999999998
No 91
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=99.91 E-value=2e-24 Score=204.42 Aligned_cols=143 Identities=25% Similarity=0.389 Sum_probs=128.5
Q ss_pred hcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEe
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 376 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 376 (451)
.++|+..+.||+|+||.||+|+.. +++.||||.++..........+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 85 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence 456888899999999999999975 6899999998655444444578999999999999999999999999999999999
Q ss_pred cCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 377 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 377 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|+++|+|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+||+++.++.++++||
T Consensus 86 ~~~~~~L~~~l~~~~----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~df 149 (276)
T 2yex_A 86 YCSGGELFDRIEPDI----GMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDF 149 (276)
T ss_dssp CCTTEEGGGGSBTTT----BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCC
T ss_pred ecCCCcHHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeC
Confidence 999999999986542 389999999999999999999999 9999999999999999999999998
No 92
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=99.91 E-value=1.4e-24 Score=206.60 Aligned_cols=143 Identities=23% Similarity=0.327 Sum_probs=123.4
Q ss_pred hcCCCCCCccCccCCceEEEEEeCC----CCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeE
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLAD----GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLL 373 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~~----~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 373 (451)
.++|+..+.||+|+||.||+|++.. +..||+|.++..........+.+|+.+++.++||||+++++++. .+..++
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~l 92 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI 92 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEE
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEE
Confidence 4567778999999999999998743 45799999865433333457899999999999999999999974 567899
Q ss_pred EEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 374 VYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 374 v~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
||||+++|+|.+++..... .+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+|++||
T Consensus 93 v~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Df 160 (281)
T 1mp8_A 93 IMELCTLGELRSFLQVRKY---SLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDF 160 (281)
T ss_dssp EEECCTTEEHHHHHHHTTT---TSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC-
T ss_pred EEecCCCCCHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECcc
Confidence 9999999999999986532 489999999999999999999999 9999999999999999999999998
No 93
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=99.91 E-value=6.5e-25 Score=210.23 Aligned_cols=143 Identities=25% Similarity=0.448 Sum_probs=124.5
Q ss_pred hcCCCCCCccCccCCceEEEEEe-----CCCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEec--CCe
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRL-----ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTT--VTE 370 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~-----~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~--~~~ 370 (451)
.++|+..+.||+|+||.||+|++ .+++.||||+++... ......+.+|+.++..++||||+++++++.. ...
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 87 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST-EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN 87 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCC-HHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTS
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCc
Confidence 35677789999999999999985 257899999986432 2233478999999999999999999999865 355
Q ss_pred eeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 371 KLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 371 ~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
.++||||+++|+|.+++..... .+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+|++||
T Consensus 88 ~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Df 158 (295)
T 3ugc_A 88 LKLIMEYLPYGSLRDYLQKHKE---RIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDF 158 (295)
T ss_dssp CEEEEECCTTCBHHHHHHHCGG---GCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCC
T ss_pred eEEEEEeCCCCCHHHHHHhccc---ccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccC
Confidence 8999999999999999987532 389999999999999999999999 9999999999999999999999998
No 94
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=99.91 E-value=1.6e-24 Score=209.36 Aligned_cols=143 Identities=24% Similarity=0.224 Sum_probs=121.7
Q ss_pred hcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEccccccc-ccHHHHHHHHHHHhc-CCCCCccceeeEEecCCeeeEE
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS-GGELQFQTEVKIISM-AVHRNLLRLYGFCTTVTEKLLV 374 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~-~~~~~~~~E~~~l~~-l~H~niv~l~~~~~~~~~~~lv 374 (451)
.++|+..+.||+|+||+||+|+.. +++.||||++...... .....+..|+..+.. .+||||+++++++.+.+..++|
T Consensus 56 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv 135 (311)
T 3p1a_A 56 QQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQ 135 (311)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEE
Confidence 356888899999999999999975 6899999987543322 222345556655544 4899999999999999999999
Q ss_pred EecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 375 YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 375 ~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|||+ +|+|.+++..... .++|..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+||
T Consensus 136 ~e~~-~~~L~~~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DF 201 (311)
T 3p1a_A 136 TELC-GPSLQQHCEAWGA---SLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDF 201 (311)
T ss_dssp EECC-CCBHHHHHHHHCS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCC
T ss_pred Eecc-CCCHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccc
Confidence 9999 6799998877542 489999999999999999999999 9999999999999999999999998
No 95
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.91 E-value=2.2e-24 Score=203.13 Aligned_cols=141 Identities=28% Similarity=0.440 Sum_probs=127.8
Q ss_pred cCCCCCCccCccCCceEEEEEeCCCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEecC
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYM 378 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~ 378 (451)
++|+..+.||+|+||.||+|+..+++.||+|.++.... ....+.+|+.++..++||||+++++++.+.+..++||||+
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM--SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFM 85 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB--CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCC
T ss_pred hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC--CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCC
Confidence 46777889999999999999998888999999975432 2357899999999999999999999999999999999999
Q ss_pred CCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 379 TNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 379 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
++|+|.+++..... .+++..+..++.|++.||.|||+. +|+||||||+||+++.++.++++||
T Consensus 86 ~~~~L~~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~df 148 (267)
T 3t9t_A 86 EHGCLSDYLRTQRG---LFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDF 148 (267)
T ss_dssp TTCBHHHHHHHTTT---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCT
T ss_pred CCCcHHHHHhhCcc---cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEccc
Confidence 99999999986532 478999999999999999999999 9999999999999999999999998
No 96
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=99.91 E-value=1.1e-24 Score=210.01 Aligned_cols=147 Identities=29% Similarity=0.403 Sum_probs=128.4
Q ss_pred hcCCCCCCccCccCCceEEEEEe------CCCCEEEEEEcccccccccHHHHHHHHHHHhcC-CCCCccceeeEEecCCe
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRL------ADGKLVAVKRLKEERTSGGELQFQTEVKIISMA-VHRNLLRLYGFCTTVTE 370 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~------~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~ 370 (451)
.++|...+.||+|+||.||+|++ .+++.||||.++..........+.+|+.++..+ +||||+++++++...+.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~ 101 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP 101 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCC
Confidence 45677789999999999999985 246789999997554333345789999999999 89999999999999999
Q ss_pred eeEEEecCCCCChhHHhhccCCC--------------CCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceee
Q 013004 371 KLLVYPYMTNGSVASRLRERQSS--------------LPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILL 436 (451)
Q Consensus 371 ~~lv~ey~~~gsL~~~l~~~~~~--------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILl 436 (451)
.++||||+++|+|.+++...... ...+++.++..++.|++.||.|||++ +|+||||||+||++
T Consensus 102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~ 178 (313)
T 1t46_A 102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILL 178 (313)
T ss_dssp CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEE
T ss_pred cEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEE
Confidence 99999999999999999875321 12489999999999999999999999 99999999999999
Q ss_pred CCCCCccchhh
Q 013004 437 DEDADQSSKTI 447 (451)
Q Consensus 437 d~~~~~~i~df 447 (451)
+.++.+|++||
T Consensus 179 ~~~~~~kl~Df 189 (313)
T 1t46_A 179 THGRITKICDF 189 (313)
T ss_dssp ETTTEEEECCC
T ss_pred cCCCCEEEccc
Confidence 99999999998
No 97
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=99.91 E-value=3e-24 Score=205.92 Aligned_cols=137 Identities=28% Similarity=0.422 Sum_probs=117.9
Q ss_pred hcCCCCCCccCccCCceEEEEEeCCCCEEEEEEcccccccccHHHHHHHHHHHhc--CCCCCccceeeEEec----CCee
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISM--AVHRNLLRLYGFCTT----VTEK 371 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~--l~H~niv~l~~~~~~----~~~~ 371 (451)
.++|+..+.||+|+||+||+|++ +++.||||++... ....+.+|.+++.. ++||||+++++++.. ....
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~----~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ 81 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR----DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQL 81 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG----GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc----cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCcee
Confidence 45788889999999999999998 6889999998543 22345566666655 899999999998654 3457
Q ss_pred eEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHh--------cCCCCCeeecCCCCCceeeCCCCCcc
Q 013004 372 LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLH--------EHCDPKIIHRDVKAANILLDEDADQS 443 (451)
Q Consensus 372 ~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH--------~~~~~~iiHrDlK~~NILld~~~~~~ 443 (451)
++||||+++|+|.++++.. .+++..+..++.|++.||+||| +. +|+||||||+|||++.++.+|
T Consensus 82 ~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~~~k 153 (301)
T 3q4u_A 82 WLITHYHEMGSLYDYLQLT-----TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNGQCC 153 (301)
T ss_dssp EEEECCCTTCBHHHHHTTC-----CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTSCEE
T ss_pred EEehhhccCCCHHHHHhhc-----ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCCCEE
Confidence 9999999999999999643 3899999999999999999999 66 999999999999999999999
Q ss_pred chhh
Q 013004 444 SKTI 447 (451)
Q Consensus 444 i~df 447 (451)
|+||
T Consensus 154 l~Df 157 (301)
T 3q4u_A 154 IADL 157 (301)
T ss_dssp ECCC
T ss_pred EeeC
Confidence 9998
No 98
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=99.91 E-value=1.2e-24 Score=221.27 Aligned_cols=143 Identities=27% Similarity=0.433 Sum_probs=126.6
Q ss_pred HhcCCCCCCccCccCCceEEEEEeCCCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEe
Q 013004 297 ATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 376 (451)
Q Consensus 297 ~~~~f~~~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 376 (451)
..++|+..+.||+|+||.||+|.+.++..||||+++... ....+|.+|+.+++.++||||+++++++.+ +..++|||
T Consensus 182 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e 258 (452)
T 1fmk_A 182 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT--MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTE 258 (452)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS--SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEC
T ss_pred ChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC--CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEeh
Confidence 345677788999999999999999887889999997543 234579999999999999999999999876 67899999
Q ss_pred cCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 377 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 377 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|+++|+|.+++..... ..+++.++..++.|++.||+|||++ +|+||||||+|||+++++.+||+||
T Consensus 259 ~~~~gsL~~~l~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~Df 324 (452)
T 1fmk_A 259 YMSKGSLLDFLKGETG--KYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADF 324 (452)
T ss_dssp CCTTCBHHHHHSHHHH--TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCC
T ss_pred hhcCCCHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCC
Confidence 9999999999975322 2388999999999999999999999 9999999999999999999999998
No 99
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=99.91 E-value=2.5e-24 Score=204.48 Aligned_cols=143 Identities=32% Similarity=0.488 Sum_probs=127.2
Q ss_pred hcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccc--cccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEE
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLV 374 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 374 (451)
.++|+..+.||+|+||.||+|+.. +++.||||++..... ......+.+|+.+++.++||||+++++++.+....++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 87 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence 456888899999999999999865 577999999854322 12244689999999999999999999999999999999
Q ss_pred EecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 375 YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 375 ~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|||+++|+|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+||+++.++.++++||
T Consensus 88 ~e~~~~~~l~~~l~~~~----~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Df 153 (279)
T 3fdn_A 88 LEYAPLGTVYRELQKLS----KFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADF 153 (279)
T ss_dssp ECCCTTEEHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSC
T ss_pred EecCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEec
Confidence 99999999999998753 389999999999999999999998 9999999999999999999999998
No 100
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=99.91 E-value=9.6e-25 Score=211.81 Aligned_cols=149 Identities=27% Similarity=0.406 Sum_probs=119.6
Q ss_pred HHhcCCCCCCccCccCCceEEEEEeCC-C---CEEEEEEcccccc-cccHHHHHHHHHHHhcCCCCCccceeeEEecCCe
Q 013004 296 VATDGFSNKNILGRGGFGKVYKGRLAD-G---KLVAVKRLKEERT-SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTE 370 (451)
Q Consensus 296 ~~~~~f~~~~~lG~G~fg~Vy~~~~~~-~---~~vAvK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 370 (451)
...++|+..+.||+|+||.||+|+... + ..||||.++.... ......+.+|+.+++.++||||+++++++.....
T Consensus 20 i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 99 (323)
T 3qup_A 20 IPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRA 99 (323)
T ss_dssp CC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC--
T ss_pred cChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccc
Confidence 345678889999999999999998654 3 2799999975432 2234579999999999999999999999987665
Q ss_pred e------eEEEecCCCCChhHHhhccCC--CCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCc
Q 013004 371 K------LLVYPYMTNGSVASRLRERQS--SLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQ 442 (451)
Q Consensus 371 ~------~lv~ey~~~gsL~~~l~~~~~--~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~ 442 (451)
. ++||||+++|+|.+++..... ....+++.++..++.|++.||.|||+. +|+||||||+|||+++++.+
T Consensus 100 ~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~~~ 176 (323)
T 3qup_A 100 KGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTV 176 (323)
T ss_dssp -----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCE
T ss_pred ccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCCCE
Confidence 5 999999999999999975421 122489999999999999999999999 99999999999999999999
Q ss_pred cchhh
Q 013004 443 SSKTI 447 (451)
Q Consensus 443 ~i~df 447 (451)
|++||
T Consensus 177 kl~Df 181 (323)
T 3qup_A 177 CVADF 181 (323)
T ss_dssp EECCC
T ss_pred EEeec
Confidence 99998
No 101
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.91 E-value=1.1e-25 Score=219.97 Aligned_cols=141 Identities=20% Similarity=0.239 Sum_probs=116.8
Q ss_pred hcCCCCCCccCccCCceEEEEEeCCCCEEEEEEcccccc-------cccHHHHHHHHHHHhcCC---------CCCccce
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERT-------SGGELQFQTEVKIISMAV---------HRNLLRL 361 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~-------~~~~~~~~~E~~~l~~l~---------H~niv~l 361 (451)
.++|+..+.||+|+||+||+|+. +|+.||||+++.... ......+.+|+.+++.++ |||||++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 45677889999999999999998 689999999975432 122356889999888775 7777777
Q ss_pred eeEEe-----------------c-------------CCeeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHH
Q 013004 362 YGFCT-----------------T-------------VTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSAR 411 (451)
Q Consensus 362 ~~~~~-----------------~-------------~~~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~ 411 (451)
.+++. + ....++||||+++|++.+.+.+. .+++..+..++.|++.
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~~-----~~~~~~~~~i~~qi~~ 172 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRTK-----LSSLATAKSILHQLTA 172 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTTT-----CCCHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHhc-----CCCHHHHHHHHHHHHH
Confidence 66542 2 67899999999999877777442 3799999999999999
Q ss_pred HHHhHh-cCCCCCeeecCCCCCceeeCCCC--------------------Cccchhh
Q 013004 412 GLSYLH-EHCDPKIIHRDVKAANILLDEDA--------------------DQSSKTI 447 (451)
Q Consensus 412 ~L~yLH-~~~~~~iiHrDlK~~NILld~~~--------------------~~~i~df 447 (451)
||+||| +. +|+||||||+|||++.++ .+||+||
T Consensus 173 aL~~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DF 226 (336)
T 2vuw_A 173 SLAVAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDY 226 (336)
T ss_dssp HHHHHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCC
T ss_pred HHHHHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeec
Confidence 999999 88 999999999999999987 8999998
No 102
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=99.91 E-value=4.5e-24 Score=206.89 Aligned_cols=139 Identities=29% Similarity=0.444 Sum_probs=123.6
Q ss_pred CCCCCccCccCCceEEEEEeC-----CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEec--CCeeeE
Q 013004 301 FSNKNILGRGGFGKVYKGRLA-----DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTT--VTEKLL 373 (451)
Q Consensus 301 f~~~~~lG~G~fg~Vy~~~~~-----~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~--~~~~~l 373 (451)
|+..+.||+|+||.||++.+. +++.||||+++..........+.+|+.+++.++||||+++++++.. ....++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 367789999999999998753 5789999999765433344579999999999999999999999987 457899
Q ss_pred EEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 374 VYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 374 v~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
||||+++|+|.+++.... +++.++..++.|++.||.|||+. +|+||||||+||+++.++.++|+||
T Consensus 113 v~e~~~~~~L~~~l~~~~-----~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Df 178 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLPRHS-----IGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDF 178 (318)
T ss_dssp EECCCTTCBHHHHGGGSC-----CCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCG
T ss_pred EEecccCCcHHHHHhhCC-----CCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCc
Confidence 999999999999997642 89999999999999999999999 9999999999999999999999998
No 103
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=99.90 E-value=2.5e-24 Score=218.15 Aligned_cols=144 Identities=19% Similarity=0.272 Sum_probs=125.3
Q ss_pred HhcCCCCCCccCccCCceEEEEEe-CCCCEEEEEEccccccc-ccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEE
Q 013004 297 ATDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTS-GGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLV 374 (451)
Q Consensus 297 ~~~~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 374 (451)
..++|+..+.||+|+||.||+|.. .+|+.||+|++...... .....+.+|+.+++.++|||||++++++.+.+..++|
T Consensus 9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv 88 (444)
T 3soa_A 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLI 88 (444)
T ss_dssp HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEE
T ss_pred ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEE
Confidence 356788889999999999999986 46899999998654322 2234689999999999999999999999999999999
Q ss_pred EecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCC---CCCccchhh
Q 013004 375 YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDE---DADQSSKTI 447 (451)
Q Consensus 375 ~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~---~~~~~i~df 447 (451)
|||+++|+|.+.+.... .+++.++..++.|++.||.|||+. +|+||||||+|||++. ++.+||+||
T Consensus 89 ~E~~~gg~L~~~i~~~~----~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DF 157 (444)
T 3soa_A 89 FDLVTGGELFEDIVARE----YYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADF 157 (444)
T ss_dssp ECCCBCCBHHHHHHHCS----CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCC
T ss_pred EEeCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccC
Confidence 99999999999998753 389999999999999999999999 9999999999999994 578999998
No 104
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.90 E-value=2.7e-24 Score=209.91 Aligned_cols=143 Identities=29% Similarity=0.480 Sum_probs=125.5
Q ss_pred cCCCCCCccCccCCceEEEEEeCC-----CCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeE
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLAD-----GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLL 373 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~~-----~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 373 (451)
++|+..+.||+|+||.||+|+... +..||||.++..........+.+|+.++..++||||+++++++...+..++
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 123 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI 123 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEE
Confidence 345567889999999999998642 236999999755433344578999999999999999999999999999999
Q ss_pred EEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 374 VYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 374 v~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
||||+++|+|.+++..... .+++.++..++.|++.||.|||+. +|+||||||+||+++.++.+|++||
T Consensus 124 v~e~~~~~~L~~~l~~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Df 191 (333)
T 1mqb_A 124 ITEYMENGALDKFLREKDG---EFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDF 191 (333)
T ss_dssp EEECCTTEEHHHHHHHTTT---CSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC
T ss_pred EEeCCCCCcHHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCC
Confidence 9999999999999986532 489999999999999999999999 9999999999999999999999998
No 105
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=99.90 E-value=6.9e-24 Score=200.98 Aligned_cols=141 Identities=23% Similarity=0.407 Sum_probs=115.8
Q ss_pred cCCCCCCccCccCCceEEEEEe-CCCCEEEEEEcccccc--cccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEE
Q 013004 299 DGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERT--SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 375 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (451)
++|+..+.||+|+||.||+|+. .+++.||+|+++.... ......+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEE
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEe
Confidence 5788899999999999999986 4689999999865432 223447889999999999999999999999999999999
Q ss_pred ecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 376 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 376 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
||+ ++++.+.+.... .+++.++..++.|++.||.|||+. +|+||||||+||++++++.+|++||
T Consensus 93 e~~-~~~l~~~~~~~~----~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Df 156 (275)
T 2eue_A 93 EYA-GNELFDYIVQRD----KMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADF 156 (275)
T ss_dssp ECC-CEEHHHHHHTSS----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCS
T ss_pred hhc-CCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEEEeec
Confidence 999 778888887653 389999999999999999999999 9999999999999999999999998
No 106
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=99.90 E-value=2.9e-24 Score=214.77 Aligned_cols=145 Identities=23% Similarity=0.334 Sum_probs=126.6
Q ss_pred cCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCC--eeeEEE
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVT--EKLLVY 375 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~--~~~lv~ 375 (451)
++|...+.||+|+||.||+|+.. +++.||||+++..........+.+|+.++..++||||+++++++.... ..++||
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~ 88 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEE
Confidence 45777899999999999999975 589999999976544444567889999999999999999999998755 679999
Q ss_pred ecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceee----CCCCCccchhh
Q 013004 376 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILL----DEDADQSSKTI 447 (451)
Q Consensus 376 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILl----d~~~~~~i~df 447 (451)
||+++|+|.+++...... ..+++..+..++.|++.||+|||+. +|+||||||+|||+ +.++.+||+||
T Consensus 89 e~~~~g~L~~~l~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DF 160 (396)
T 4eut_A 89 EFCPCGSLYTVLEEPSNA-YGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDF 160 (396)
T ss_dssp CCCTTEEHHHHTTSGGGT-TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCG
T ss_pred ecCCCCCHHHHHHhhhcc-cCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecC
Confidence 999999999999765322 2389999999999999999999999 99999999999999 77778999998
No 107
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=99.90 E-value=3.1e-24 Score=218.68 Aligned_cols=141 Identities=20% Similarity=0.333 Sum_probs=114.3
Q ss_pred cCCCCCCccCccCCceEEEEEeC-CCCEEEEEEccccccc-ccHHHHHHHHHHHhcCCCCCccceeeEEec-----CCee
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS-GGELQFQTEVKIISMAVHRNLLRLYGFCTT-----VTEK 371 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~-----~~~~ 371 (451)
++|+..+.||+|+||+||+|+.. +++.||||++...... .....+.+|+.++..++|||||++++++.. ....
T Consensus 53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 132 (458)
T 3rp9_A 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDEL 132 (458)
T ss_dssp TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceE
Confidence 56888999999999999999864 6899999998643222 223468999999999999999999999843 3568
Q ss_pred eEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 372 LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 372 ~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|+||||+ +|+|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+||
T Consensus 133 ~lv~e~~-~~~L~~~~~~~~----~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DF 200 (458)
T 3rp9_A 133 YVVLEIA-DSDFKKLFRTPV----YLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDF 200 (458)
T ss_dssp EEEECCC-SEEHHHHHHSSC----CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCC
T ss_pred EEEEecc-ccchhhhcccCC----CCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeeccc
Confidence 9999998 579999987643 389999999999999999999999 9999999999999999999999998
No 108
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=99.90 E-value=4e-24 Score=206.20 Aligned_cols=142 Identities=23% Similarity=0.360 Sum_probs=126.1
Q ss_pred cCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccc-cHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEe
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 376 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 376 (451)
++|+..+.||+|+||.||+|+.. +++.||||++....... ....+.+|+.++..++||||+++++++...+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE 82 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence 56788899999999999999975 58999999986543222 23468899999999999999999999999999999999
Q ss_pred cCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 377 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 377 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|+++++|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+||+++.++.++++||
T Consensus 83 ~~~~~~l~~~~~~~~----~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Df 146 (311)
T 4agu_A 83 YCDHTVLHELDRYQR----GVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDF 146 (311)
T ss_dssp CCSEEHHHHHHHTSS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCC
T ss_pred eCCCchHHHHHhhhc----CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeC
Confidence 999999998887543 389999999999999999999999 9999999999999999999999998
No 109
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=99.90 E-value=9.7e-24 Score=203.98 Aligned_cols=141 Identities=25% Similarity=0.349 Sum_probs=123.5
Q ss_pred cCCCC-CCccCccCCceEEEEEe-CCCCEEEEEEcccccccccHHHHHHHHHHHhc-CCCCCccceeeEEecCCeeeEEE
Q 013004 299 DGFSN-KNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISM-AVHRNLLRLYGFCTTVTEKLLVY 375 (451)
Q Consensus 299 ~~f~~-~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~-l~H~niv~l~~~~~~~~~~~lv~ 375 (451)
+.|.. .+.||+|+||.||+|+. .+++.||||+++... ......+.+|+.++.. .+||||+++++++.+.+..++||
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~ 90 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQP-GHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVF 90 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCS-SCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCc-chhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEE
Confidence 45655 37899999999999985 468999999986542 2334578999999988 47999999999999999999999
Q ss_pred ecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCC---ccchhh
Q 013004 376 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDAD---QSSKTI 447 (451)
Q Consensus 376 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~---~~i~df 447 (451)
||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++. +|++||
T Consensus 91 e~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Df 158 (316)
T 2ac3_A 91 EKMRGGSILSHIHKRR----HFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDF 158 (316)
T ss_dssp ECCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCT
T ss_pred EcCCCCcHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEc
Confidence 9999999999998753 389999999999999999999999 9999999999999998876 899998
No 110
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=99.90 E-value=3.9e-24 Score=208.07 Aligned_cols=146 Identities=29% Similarity=0.502 Sum_probs=124.9
Q ss_pred cCCCCCCccCccCCceEEEEEeC-CCCE--EEEEEcccccccccHHHHHHHHHHHhcC-CCCCccceeeEEecCCeeeEE
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA-DGKL--VAVKRLKEERTSGGELQFQTEVKIISMA-VHRNLLRLYGFCTTVTEKLLV 374 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~-~~~~--vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv 374 (451)
++|+..+.||+|+||.||+|+.. ++.. ||+|.++..........+.+|+.++..+ +||||+++++++.+.+..++|
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 104 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 104 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence 56777899999999999999864 4554 4999986544344445789999999999 899999999999999999999
Q ss_pred EecCCCCChhHHhhccC------------CCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCc
Q 013004 375 YPYMTNGSVASRLRERQ------------SSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQ 442 (451)
Q Consensus 375 ~ey~~~gsL~~~l~~~~------------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~ 442 (451)
|||+++|+|.+++.... .....+++.++..++.|++.||.|||++ +|+||||||+||+++.++.+
T Consensus 105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~ 181 (327)
T 1fvr_A 105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVA 181 (327)
T ss_dssp ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCE
T ss_pred EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEcCCCeE
Confidence 99999999999998653 1223589999999999999999999999 99999999999999999999
Q ss_pred cchhh
Q 013004 443 SSKTI 447 (451)
Q Consensus 443 ~i~df 447 (451)
|++||
T Consensus 182 kL~Df 186 (327)
T 1fvr_A 182 KIADF 186 (327)
T ss_dssp EECCT
T ss_pred EEccc
Confidence 99998
No 111
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=99.90 E-value=1.6e-24 Score=213.37 Aligned_cols=143 Identities=27% Similarity=0.340 Sum_probs=126.2
Q ss_pred hcCCCCCCccCccCCceEEEEEe----CCCCEEEEEEcccccc---cccHHHHHHHHHHHhcC-CCCCccceeeEEecCC
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRL----ADGKLVAVKRLKEERT---SGGELQFQTEVKIISMA-VHRNLLRLYGFCTTVT 369 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~----~~~~~vAvK~~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~ 369 (451)
.++|+..+.||+|+||.||+|+. .+++.||||+++.... ......+.+|+.++..+ +||||+++++++....
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 35688889999999999999987 3689999999865431 12234577899999998 6999999999999999
Q ss_pred eeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 370 EKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 370 ~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
..++||||+++|+|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+||
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Df 203 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQRE----RFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDF 203 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCS
T ss_pred eEEEEeecCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEeeC
Confidence 9999999999999999998753 389999999999999999999999 9999999999999999999999998
No 112
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=99.90 E-value=3.9e-24 Score=202.89 Aligned_cols=144 Identities=28% Similarity=0.473 Sum_probs=127.8
Q ss_pred hcCCCCCCccCccCCceEEEEEe-CCCCEEEEEEcccccc--cccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEE
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERT--SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLV 374 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 374 (451)
.++|+..+.||+|+||.||+|+. .+++.||||.+..... ......+.+|+.++..++||||+++++++...+..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV 89 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence 35678889999999999999987 4789999999864322 12235789999999999999999999999999999999
Q ss_pred EecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 375 YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 375 ~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|||+++++|.+++.... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.++++||
T Consensus 90 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~df 156 (278)
T 3cok_A 90 LEMCHNGEMNRYLKNRV---KPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADF 156 (278)
T ss_dssp EECCTTEEHHHHHHTCS---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCC
T ss_pred EecCCCCcHHHHHhhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEee
Confidence 99999999999998643 2489999999999999999999999 9999999999999999999999998
No 113
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=99.90 E-value=3.5e-24 Score=210.53 Aligned_cols=140 Identities=29% Similarity=0.372 Sum_probs=119.6
Q ss_pred hcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEe
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 376 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 376 (451)
.++|+..+.||+|+||.||+|+.. +++.||||+++... ....+.+|+.++..++||||+++++++...+..++|||
T Consensus 52 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 128 (349)
T 2w4o_A 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV---DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLE 128 (349)
T ss_dssp GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC-------------CHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred cCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch---hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEE
Confidence 456788899999999999999975 57899999986532 23468899999999999999999999999999999999
Q ss_pred cCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCC---CCCccchhh
Q 013004 377 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDE---DADQSSKTI 447 (451)
Q Consensus 377 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~---~~~~~i~df 447 (451)
|+++|+|.+++.... .+++.++..++.|++.||.|||+. +|+||||||+|||++. ++.+||+||
T Consensus 129 ~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Df 195 (349)
T 2w4o_A 129 LVTGGELFDRIVEKG----YYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADF 195 (349)
T ss_dssp CCCSCBHHHHHTTCS----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCC
T ss_pred eCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccC
Confidence 999999999997643 389999999999999999999999 9999999999999986 788999998
No 114
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=99.90 E-value=3e-24 Score=211.70 Aligned_cols=144 Identities=26% Similarity=0.359 Sum_probs=128.3
Q ss_pred hcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEe
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 376 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 376 (451)
.++|...+.||+|+||.||+|+.. +++.||+|+++..........+.+|+.++..++||||+++++++...+..++|||
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 111 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 111 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEE
Confidence 356888899999999999999975 6899999998765433334578999999999999999999999999999999999
Q ss_pred cCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 377 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 377 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|+++|+|.+++.... .+++..+..++.|++.||.|||+.+ +|+||||||+|||++.++.++|+||
T Consensus 112 ~~~~~~L~~~l~~~~----~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Df 176 (360)
T 3eqc_A 112 HMDGGSLDQVLKKAG----RIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDF 176 (360)
T ss_dssp CCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCC
T ss_pred CCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEEC
Confidence 999999999998753 3889999999999999999999831 7999999999999999999999998
No 115
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=99.90 E-value=1.6e-24 Score=210.71 Aligned_cols=142 Identities=26% Similarity=0.453 Sum_probs=122.8
Q ss_pred cCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEec
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 377 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey 377 (451)
++|...+.||+|+||.||+|+.. +++.||||+++..........+.+|+.+++.++||||+++++++...+..++||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 46777899999999999999975 68999999986544332223466899999999999999999999999999999999
Q ss_pred CCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 378 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 378 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
++ |+|.+++..... .+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+|++||
T Consensus 82 ~~-~~l~~~~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Df 144 (324)
T 3mtl_A 82 LD-KDLKQYLDDCGN---IINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADF 144 (324)
T ss_dssp CS-EEHHHHHHHTTT---CCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSS
T ss_pred cc-cCHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccC
Confidence 97 599998876532 488999999999999999999999 9999999999999999999999998
No 116
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=99.90 E-value=2.6e-24 Score=213.33 Aligned_cols=141 Identities=33% Similarity=0.505 Sum_probs=121.6
Q ss_pred CCCCCccCccCCceEEEEEeC--CC--CEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEec-CCeeeEEE
Q 013004 301 FSNKNILGRGGFGKVYKGRLA--DG--KLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTT-VTEKLLVY 375 (451)
Q Consensus 301 f~~~~~lG~G~fg~Vy~~~~~--~~--~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~-~~~~~lv~ 375 (451)
|...+.||+|+||.||+|++. ++ ..||||.++.........+|.+|+.+++.++||||+++++++.. .+..++||
T Consensus 91 ~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~ 170 (373)
T 3c1x_A 91 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL 170 (373)
T ss_dssp EEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEE
T ss_pred eecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEE
Confidence 455678999999999999863 22 46899998654433445579999999999999999999998765 45789999
Q ss_pred ecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 376 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 376 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
||+++|+|.+++..... .+++.++..++.|+++||+|||+. +|+||||||+|||+++++.+||+||
T Consensus 171 e~~~~g~L~~~l~~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DF 236 (373)
T 3c1x_A 171 PYMKHGDLRNFIRNETH---NPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADF 236 (373)
T ss_dssp ECCTTCBHHHHHHCTTC---CCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC
T ss_pred ECCCCCCHHHHHhhccc---CCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeec
Confidence 99999999999976432 478999999999999999999999 9999999999999999999999998
No 117
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=99.90 E-value=3.5e-24 Score=207.23 Aligned_cols=147 Identities=26% Similarity=0.371 Sum_probs=125.3
Q ss_pred hcCCCCCCccCccCCceEEEEEe-CCCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEe----cCCeee
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCT----TVTEKL 372 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~----~~~~~~ 372 (451)
.++|+..+.||+|+||.||+|+. .+++.||||++.... ......+.+|+.++..++||||+++++++. .....+
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 106 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHE-QQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAW 106 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESS-HHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCC-HHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeE
Confidence 45688889999999999999997 578999999885432 223447899999999999999999999987 344689
Q ss_pred EEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhhh
Q 013004 373 LVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 448 (451)
Q Consensus 373 lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df~ 448 (451)
+||||+++|+|.+++.........+++.++..++.|++.||.|||+. +|+||||||+||+++.++.++++||=
T Consensus 107 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg 179 (317)
T 2buj_A 107 LLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLG 179 (317)
T ss_dssp EEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCS
T ss_pred EEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecC
Confidence 99999999999999986433334589999999999999999999999 99999999999999999999999983
No 118
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=99.90 E-value=2.9e-24 Score=209.94 Aligned_cols=144 Identities=26% Similarity=0.314 Sum_probs=126.8
Q ss_pred HhcCCCCCCccCccCCceEEEEEe-CCCCEEEEEEcccccccc-------cHHHHHHHHHHHhcCCCCCccceeeEEecC
Q 013004 297 ATDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSG-------GELQFQTEVKIISMAVHRNLLRLYGFCTTV 368 (451)
Q Consensus 297 ~~~~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~~-------~~~~~~~E~~~l~~l~H~niv~l~~~~~~~ 368 (451)
..++|+..+.||+|+||.||+|+. .+++.||||+++...... ....+.+|+.+++.++||||+++++++.+.
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 356788899999999999999986 468899999986543211 223578899999999999999999999999
Q ss_pred CeeeEEEecCCCC-ChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 369 TEKLLVYPYMTNG-SVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 369 ~~~~lv~ey~~~g-sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+..++||||+.+| +|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+||
T Consensus 102 ~~~~lv~e~~~~g~~l~~~~~~~~----~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Df 174 (335)
T 3dls_A 102 GFFQLVMEKHGSGLDLFAFIDRHP----RLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDF 174 (335)
T ss_dssp SEEEEEEECCTTSCBHHHHHHTCC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCC
T ss_pred CEEEEEEEeCCCCccHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEEEeec
Confidence 9999999999877 9999997653 389999999999999999999999 9999999999999999999999998
No 119
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=99.90 E-value=2.3e-24 Score=205.55 Aligned_cols=143 Identities=26% Similarity=0.410 Sum_probs=124.5
Q ss_pred hcCCCCCCccCccCCceEEEEEeCC-C-------CEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCC
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLAD-G-------KLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVT 369 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~~-~-------~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~ 369 (451)
.++|...+.||+|+||.||+|+... + ..||+|.++... ......+.+|+.++..++||||+++++++...+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 85 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAH-RNYSESFFEAASMMSKLSHKHLVLNYGVCVCGD 85 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGG-GGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTT
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhccccc-HHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCC
Confidence 3567778899999999999998643 3 479999986543 233457999999999999999999999999999
Q ss_pred eeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCC--------
Q 013004 370 EKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDAD-------- 441 (451)
Q Consensus 370 ~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~-------- 441 (451)
..++||||+++|+|.+++..... .+++..+..++.|++.||.|||+. +|+||||||+|||++.++.
T Consensus 86 ~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~ 159 (289)
T 4fvq_A 86 ENILVQEFVKFGSLDTYLKKNKN---CINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPPF 159 (289)
T ss_dssp CCEEEEECCTTCBHHHHHHHTGG---GCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBCCE
T ss_pred CCEEEEECCCCCCHHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCcccccccce
Confidence 99999999999999999987532 378999999999999999999999 9999999999999999887
Q ss_pred ccchhh
Q 013004 442 QSSKTI 447 (451)
Q Consensus 442 ~~i~df 447 (451)
++++||
T Consensus 160 ~kl~Df 165 (289)
T 4fvq_A 160 IKLSDP 165 (289)
T ss_dssp EEECCC
T ss_pred eeeccC
Confidence 788887
No 120
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=99.90 E-value=7.9e-24 Score=202.55 Aligned_cols=142 Identities=23% Similarity=0.345 Sum_probs=126.5
Q ss_pred cCCCCCCccCccCCceEEEEEeC-CCCEEEEEEccccccc--ccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEE
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS--GGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 375 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (451)
++|...+.||+|+||.||+|+.. +++.||+|.+...... .....+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 94 (294)
T 2rku_A 15 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVL 94 (294)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEE
Confidence 45777899999999999999975 5789999998654322 22346889999999999999999999999999999999
Q ss_pred ecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 376 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 376 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
||+++++|.+++.... .+++.++..++.|++.||.|||+. +|+||||||+||+++.++.++++||
T Consensus 95 e~~~~~~L~~~~~~~~----~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~df 159 (294)
T 2rku_A 95 ELCRRRSLLELHKRRK----ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDF 159 (294)
T ss_dssp ECCTTCBHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCC
T ss_pred ecCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEec
Confidence 9999999999987653 389999999999999999999999 9999999999999999999999998
No 121
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=99.90 E-value=6.8e-24 Score=211.24 Aligned_cols=143 Identities=20% Similarity=0.320 Sum_probs=125.7
Q ss_pred hcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEe
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 376 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 376 (451)
.++|+..+.||+|+||.||+|... +++.||+|.+..... .....+.+|+.++..++||||+++++++.+....++|||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~-~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E 128 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYP-LDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILE 128 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSH-HHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEE
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccch-hhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEE
Confidence 356888899999999999999875 688999999864322 223468999999999999999999999999999999999
Q ss_pred cCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCC--CCCccchhh
Q 013004 377 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDE--DADQSSKTI 447 (451)
Q Consensus 377 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~--~~~~~i~df 447 (451)
|+++|+|.+++.... ..+++.++..++.|++.||+|||+. +|+||||||+|||++. ++.+||+||
T Consensus 129 ~~~gg~L~~~l~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DF 195 (387)
T 1kob_A 129 FLSGGELFDRIAAED---YKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDF 195 (387)
T ss_dssp CCCCCBHHHHTTCTT---CCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCC
T ss_pred cCCCCcHHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEec
Confidence 999999999997543 2489999999999999999999999 9999999999999985 467999998
No 122
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=99.90 E-value=8.4e-25 Score=213.17 Aligned_cols=150 Identities=27% Similarity=0.391 Sum_probs=128.9
Q ss_pred HHHhcCCCCCCccCccCCceEEEEEeCC-C-----CEEEEEEcccccccccHHHHHHHHHHHhcC-CCCCccceeeEEec
Q 013004 295 QVATDGFSNKNILGRGGFGKVYKGRLAD-G-----KLVAVKRLKEERTSGGELQFQTEVKIISMA-VHRNLLRLYGFCTT 367 (451)
Q Consensus 295 ~~~~~~f~~~~~lG~G~fg~Vy~~~~~~-~-----~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~ 367 (451)
....++|...+.||+|+||.||+|.... + +.||+|.++..........+.+|+.++..+ +||||+++++++..
T Consensus 42 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 121 (333)
T 2i1m_A 42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTH 121 (333)
T ss_dssp BCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred cCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEec
Confidence 3445778888999999999999998642 2 479999997654333445789999999999 89999999999999
Q ss_pred CCeeeEEEecCCCCChhHHhhccCC----------CCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeC
Q 013004 368 VTEKLLVYPYMTNGSVASRLRERQS----------SLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLD 437 (451)
Q Consensus 368 ~~~~~lv~ey~~~gsL~~~l~~~~~----------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld 437 (451)
.+..++||||+++|+|.+++..... ....+++..+..++.|++.||.|||+. +|+||||||+|||++
T Consensus 122 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~ 198 (333)
T 2i1m_A 122 GGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLT 198 (333)
T ss_dssp SSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGCEEE
T ss_pred CCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccceEEEC
Confidence 9999999999999999999975421 012478999999999999999999999 999999999999999
Q ss_pred CCCCccchhh
Q 013004 438 EDADQSSKTI 447 (451)
Q Consensus 438 ~~~~~~i~df 447 (451)
.++.++++||
T Consensus 199 ~~~~~kl~Df 208 (333)
T 2i1m_A 199 NGHVAKIGDF 208 (333)
T ss_dssp GGGEEEBCCC
T ss_pred CCCeEEECcc
Confidence 9999999998
No 123
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=99.90 E-value=1.3e-23 Score=200.24 Aligned_cols=142 Identities=31% Similarity=0.601 Sum_probs=122.4
Q ss_pred hcCCCCCCccCccCCceEEEEEe-CCCCEEEEEEcccccccccH------HHHHHHHHHHhcCCCCCccceeeEEecCCe
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGE------LQFQTEVKIISMAVHRNLLRLYGFCTTVTE 370 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~~~~------~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 370 (451)
.++|+..+.||+|+||.||+|+. .+++.||||++......... ..+.+|+.++..++||||+++++++.+..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 96 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP- 96 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence 35677789999999999999997 46899999998654332221 46899999999999999999999987654
Q ss_pred eeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCC--eeecCCCCCceeeCCCCC-----cc
Q 013004 371 KLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPK--IIHRDVKAANILLDEDAD-----QS 443 (451)
Q Consensus 371 ~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~--iiHrDlK~~NILld~~~~-----~~ 443 (451)
++||||+++|+|.+.+..... .+++..+..++.|++.||+|||++ + |+||||||+|||++.++. +|
T Consensus 97 -~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~~~~k 169 (287)
T 4f0f_A 97 -RMVMEFVPCGDLYHRLLDKAH---PIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPVCAK 169 (287)
T ss_dssp -EEEEECCTTCBHHHHHHCTTS---CCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCSCCEE
T ss_pred -eEEEEecCCCCHHHHHhcccC---CccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCceeEE
Confidence 799999999999999876532 489999999999999999999998 6 999999999999998876 89
Q ss_pred chhh
Q 013004 444 SKTI 447 (451)
Q Consensus 444 i~df 447 (451)
++||
T Consensus 170 l~Df 173 (287)
T 4f0f_A 170 VADF 173 (287)
T ss_dssp ECCC
T ss_pred eCCC
Confidence 9998
No 124
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=99.90 E-value=1.9e-24 Score=210.13 Aligned_cols=142 Identities=25% Similarity=0.434 Sum_probs=121.2
Q ss_pred cCCCCCCccCccCCceEEEEEeC-CCCE----EEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeE
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA-DGKL----VAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLL 373 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~-~~~~----vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 373 (451)
++|...+.||+|+||+||+|++. +++. ||+|.+...........+.+|+.++..++||||+++++++. ....++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~ 91 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQL 91 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEE
Confidence 45777889999999999999864 4443 78887754433333346788999999999999999999886 456899
Q ss_pred EEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 374 VYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 374 v~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|+||+++|+|.+++..... .+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+||
T Consensus 92 v~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Df 159 (325)
T 3kex_A 92 VTQYLPLGSLLDHVRQHRG---ALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADF 159 (325)
T ss_dssp EEECCTTCBSHHHHHSSGG---GSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSC
T ss_pred EEEeCCCCCHHHHHHHccc---cCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCC
Confidence 9999999999999976432 478899999999999999999999 9999999999999999999999998
No 125
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=99.90 E-value=1.8e-24 Score=224.53 Aligned_cols=144 Identities=27% Similarity=0.438 Sum_probs=127.3
Q ss_pred HHhcCCCCCCccCccCCceEEEEEeCCCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEE
Q 013004 296 VATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 375 (451)
Q Consensus 296 ~~~~~f~~~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (451)
...++|+..+.||+|+||.||+|++.++..||||+++... ....+|.+|+.+|+.++|+|||++++++.+ +..++||
T Consensus 264 i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~ 340 (535)
T 2h8h_A 264 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT--MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 340 (535)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS--SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEE
T ss_pred cchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC--CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEee
Confidence 3456677888999999999999999888889999997543 234579999999999999999999999876 6789999
Q ss_pred ecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 376 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 376 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
||+++|+|.++++.... ..+++.++..++.|++.||+|||++ +|+||||||+|||+++++.+||+||
T Consensus 341 e~~~~gsL~~~l~~~~~--~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DF 407 (535)
T 2h8h_A 341 EYMSKGSLLDFLKGETG--KYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADF 407 (535)
T ss_dssp CCCTTEEHHHHHSHHHH--TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCT
T ss_pred ehhcCCcHHHHHhhcCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEccc
Confidence 99999999999975322 2388999999999999999999999 9999999999999999999999998
No 126
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=99.90 E-value=1e-23 Score=203.51 Aligned_cols=141 Identities=30% Similarity=0.429 Sum_probs=122.7
Q ss_pred hcCCCCCCccCccCCceEEEEEeCCCCEEEEEEcccccccc-cHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEe
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 376 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 376 (451)
.++|...+.||+|+||.||+|++. ..+|+|+++...... ....|.+|+.++..++||||+++++++. .+..++|||
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e 111 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred ccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEEe
Confidence 456888899999999999999864 469999987543322 2347899999999999999999999865 456899999
Q ss_pred cCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 377 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 377 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|+++|+|.+++..... .+++.++..++.|++.||+|||+. +|+||||||+|||+++++.+||+||
T Consensus 112 ~~~~~~L~~~l~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DF 176 (307)
T 3lb7_A 112 WCEGSSLYKHLHVQET---KFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDF 176 (307)
T ss_dssp CCSSCBHHHHHHTSCC---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEECCC
T ss_pred cCCCCcHHHHHHhccc---CCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEccC
Confidence 9999999999975432 489999999999999999999999 9999999999999999999999998
No 127
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=99.90 E-value=6.9e-24 Score=209.19 Aligned_cols=152 Identities=22% Similarity=0.341 Sum_probs=131.5
Q ss_pred ccHHHHHHHhcCCCCCCccCccCCceEEEEEeCCCCEEEEEEccccccccc----------HHHHHHHHHHHhcCCCCCc
Q 013004 289 FSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGG----------ELQFQTEVKIISMAVHRNL 358 (451)
Q Consensus 289 ~~~~~~~~~~~~f~~~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~----------~~~~~~E~~~l~~l~H~ni 358 (451)
..+.++....++|...+.||+|+||.||+|...+++.||||++........ ...+.+|+.++..++||||
T Consensus 12 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i 91 (362)
T 3pg1_A 12 DLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNI 91 (362)
T ss_dssp HHHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTB
T ss_pred HHHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCc
Confidence 345677888899999999999999999999988899999999865432211 2468999999999999999
Q ss_pred cceeeEEec-----CCeeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCc
Q 013004 359 LRLYGFCTT-----VTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAAN 433 (451)
Q Consensus 359 v~l~~~~~~-----~~~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~N 433 (451)
+++++++.. ....++||||+. |+|.+.+.... ..+++..+..++.|++.||.|||+. +|+||||||+|
T Consensus 92 v~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~N 164 (362)
T 3pg1_A 92 LGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQR---IVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGN 164 (362)
T ss_dssp CCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTT---SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGG
T ss_pred cceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHH
Confidence 999999854 335799999998 68888887543 2489999999999999999999999 99999999999
Q ss_pred eeeCCCCCccchhh
Q 013004 434 ILLDEDADQSSKTI 447 (451)
Q Consensus 434 ILld~~~~~~i~df 447 (451)
||++.++.++|+||
T Consensus 165 Il~~~~~~~kl~Df 178 (362)
T 3pg1_A 165 ILLADNNDITICDF 178 (362)
T ss_dssp EEECTTCCEEECCT
T ss_pred EEEcCCCCEEEEec
Confidence 99999999999998
No 128
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.90 E-value=3.8e-24 Score=225.41 Aligned_cols=135 Identities=24% Similarity=0.366 Sum_probs=120.8
Q ss_pred ccCccCCceEEEEEeC---CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEecCCCCC
Q 013004 306 ILGRGGFGKVYKGRLA---DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGS 382 (451)
Q Consensus 306 ~lG~G~fg~Vy~~~~~---~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~gs 382 (451)
.||+|+||.||+|.++ ++..||||+++.........+|.+|+.+++.++|||||++++++.. +..++||||+++|+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~ 421 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 421 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence 6999999999999864 4567999999765444455689999999999999999999999976 56899999999999
Q ss_pred hhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 383 VASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 383 L~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|.+++.... ..+++.++..++.|++.||+|||++ +|+||||||+|||+++++.+||+||
T Consensus 422 L~~~l~~~~---~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DF 480 (613)
T 2ozo_A 422 LHKFLVGKR---EEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDF 480 (613)
T ss_dssp HHHHHTTCT---TTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCC
T ss_pred HHHHHhhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeec
Confidence 999997543 2489999999999999999999999 9999999999999999999999998
No 129
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.90 E-value=2.1e-24 Score=207.10 Aligned_cols=136 Identities=29% Similarity=0.424 Sum_probs=112.4
Q ss_pred cCCCCCCccCccCCceEEEEEeCCCCEEEEEEcccccccccHHHHHHHHHHHhc--CCCCCccceeeEEecCC----eee
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISM--AVHRNLLRLYGFCTTVT----EKL 372 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~--l~H~niv~l~~~~~~~~----~~~ 372 (451)
++|...+.||+|+||.||+|++. ++.||||+++.. ....+.+|.+++.. ++||||+++++++.... ..+
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~----~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 77 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR----EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW 77 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-T----THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEE
T ss_pred ceeeehhhccCCCCeEEEEEEEc-CcceEEEEeccc----chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeE
Confidence 56888999999999999999874 889999998542 23467778888877 78999999999998766 789
Q ss_pred EEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHh--------cCCCCCeeecCCCCCceeeCCCCCccc
Q 013004 373 LVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLH--------EHCDPKIIHRDVKAANILLDEDADQSS 444 (451)
Q Consensus 373 lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH--------~~~~~~iiHrDlK~~NILld~~~~~~i 444 (451)
+||||+++|+|.+++... .+++..+..++.|++.||+||| +. +|+||||||+|||++.++.+||
T Consensus 78 lv~e~~~~g~L~~~l~~~-----~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nil~~~~~~~kl 149 (303)
T 3gxj_A 78 LVSDYHEHGSLFDYLNRY-----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGTCCI 149 (303)
T ss_dssp EEEECCTTCCHHHHHHHC-----CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC-B
T ss_pred EEEeccCCCCHHHHHhcc-----CcchHHHHHHHHHHHHHHHHHHHHHhhhccCC---CEeeCcCCHHHeEECCCCCEEE
Confidence 999999999999999754 3788889999999999999999 66 9999999999999999999999
Q ss_pred hhh
Q 013004 445 KTI 447 (451)
Q Consensus 445 ~df 447 (451)
+||
T Consensus 150 ~DF 152 (303)
T 3gxj_A 150 ADL 152 (303)
T ss_dssp CCC
T ss_pred eec
Confidence 998
No 130
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=99.90 E-value=7.6e-24 Score=200.80 Aligned_cols=142 Identities=23% Similarity=0.338 Sum_probs=126.8
Q ss_pred hcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEe
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 376 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 376 (451)
.++|+..+.||+|+||.||+|+.. +++.||+|++..... .....+.+|+.++..++||||+++++++.+....++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 86 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV-EDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVME 86 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC-SCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhcc-chHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEe
Confidence 356788899999999999999975 477999999865433 334578999999999999999999999999999999999
Q ss_pred cCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceee---CCCCCccchhh
Q 013004 377 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILL---DEDADQSSKTI 447 (451)
Q Consensus 377 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILl---d~~~~~~i~df 447 (451)
|+++++|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+||++ +.++.++++||
T Consensus 87 ~~~~~~L~~~~~~~~----~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Df 153 (277)
T 3f3z_A 87 LCTGGELFERVVHKR----VFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDF 153 (277)
T ss_dssp CCCSCBHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCC
T ss_pred ccCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEec
Confidence 999999999987653 389999999999999999999999 99999999999999 77889999998
No 131
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=99.90 E-value=6.7e-24 Score=205.90 Aligned_cols=143 Identities=24% Similarity=0.346 Sum_probs=126.9
Q ss_pred hcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccc-----cHHHHHHHHHHHhcCCCCCccceeeEEecCCee
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSG-----GELQFQTEVKIISMAVHRNLLRLYGFCTTVTEK 371 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~-----~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 371 (451)
.++|...+.||+|+||.||+|+.. +++.||||.++...... ....+.+|+.++..++||||+++++++.+....
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 355778899999999999999975 68999999986543221 245789999999999999999999999999999
Q ss_pred eEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCC----Cccchhh
Q 013004 372 LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDA----DQSSKTI 447 (451)
Q Consensus 372 ~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~----~~~i~df 447 (451)
++||||+++|+|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+||+++.++ .++++||
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~kl~Df 163 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQKE----SLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDF 163 (321)
T ss_dssp EEEECCCCSCBHHHHHHTCS----CEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCC
T ss_pred EEEEEcCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCEEEccC
Confidence 99999999999999997643 489999999999999999999999 999999999999999987 7899998
No 132
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=99.90 E-value=1.2e-24 Score=210.06 Aligned_cols=155 Identities=28% Similarity=0.400 Sum_probs=130.9
Q ss_pred cHHHHHHHhcCCCCCCccCccCCceEEEEEe------CCCCEEEEEEcccccccccHHHHHHHHHHHhcC-CCCCcccee
Q 013004 290 SLRELQVATDGFSNKNILGRGGFGKVYKGRL------ADGKLVAVKRLKEERTSGGELQFQTEVKIISMA-VHRNLLRLY 362 (451)
Q Consensus 290 ~~~~~~~~~~~f~~~~~lG~G~fg~Vy~~~~------~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~ 362 (451)
...+.....++|...+.||+|+||.||+|++ .+++.||||+++..........+.+|+.++..+ +||||++++
T Consensus 18 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~ 97 (316)
T 2xir_A 18 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL 97 (316)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred cccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEE
Confidence 3344455667899999999999999999974 246789999997654433445789999999999 699999999
Q ss_pred eEEecCC-eeeEEEecCCCCChhHHhhccCCC------------CCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCC
Q 013004 363 GFCTTVT-EKLLVYPYMTNGSVASRLRERQSS------------LPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDV 429 (451)
Q Consensus 363 ~~~~~~~-~~~lv~ey~~~gsL~~~l~~~~~~------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDl 429 (451)
+++...+ ..++||||+++|+|.+++...... ...+++..+..++.|++.||.|||+. +|+||||
T Consensus 98 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~di 174 (316)
T 2xir_A 98 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDL 174 (316)
T ss_dssp EEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred EEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---CcccccC
Confidence 9988755 489999999999999999875431 12278999999999999999999999 9999999
Q ss_pred CCCceeeCCCCCccchhh
Q 013004 430 KAANILLDEDADQSSKTI 447 (451)
Q Consensus 430 K~~NILld~~~~~~i~df 447 (451)
||+||+++.++.+|++||
T Consensus 175 kp~Nil~~~~~~~kl~Df 192 (316)
T 2xir_A 175 AARNILLSEKNVVKICDF 192 (316)
T ss_dssp SGGGEEECGGGCEEECCC
T ss_pred ccceEEECCCCCEEECCC
Confidence 999999999999999998
No 133
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.90 E-value=6.2e-24 Score=225.98 Aligned_cols=145 Identities=24% Similarity=0.330 Sum_probs=127.7
Q ss_pred HHhcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEccccc--ccccHHHHHHHHHHHhcC-CCCCccceeeEEecCCee
Q 013004 296 VATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEER--TSGGELQFQTEVKIISMA-VHRNLLRLYGFCTTVTEK 371 (451)
Q Consensus 296 ~~~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~ 371 (451)
...++|+..++||+|+||+||+|+.. +++.||||+++... .......+..|..++..+ +||+|+++++++.+.+..
T Consensus 338 ~~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~ 417 (674)
T 3pfq_A 338 MKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRL 417 (674)
T ss_dssp --CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEE
T ss_pred ccccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEE
Confidence 34567888999999999999999975 58899999997542 223344678899999887 699999999999999999
Q ss_pred eEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 372 LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 372 ~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|+||||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||+|.++.+||+||
T Consensus 418 ~lV~E~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DF 486 (674)
T 3pfq_A 418 YFVMEYVNGGDLMYHIQQVG----RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADF 486 (674)
T ss_dssp EEEEECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCC
T ss_pred EEEEeCcCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeec
Confidence 99999999999999998754 389999999999999999999999 9999999999999999999999998
No 134
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=99.90 E-value=8.6e-24 Score=206.48 Aligned_cols=142 Identities=23% Similarity=0.345 Sum_probs=126.4
Q ss_pred cCCCCCCccCccCCceEEEEEeC-CCCEEEEEEccccccc--ccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEE
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS--GGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 375 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (451)
++|...+.||+|+||.||+++.. +++.||+|.+...... .....+.+|+.++..++||||+++++++.+.+..++||
T Consensus 41 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 120 (335)
T 2owb_A 41 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVL 120 (335)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEE
Confidence 45677789999999999999975 5789999998654322 22346889999999999999999999999999999999
Q ss_pred ecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 376 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 376 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
||+++++|.+++.... .+++.++..++.|++.||.|||++ +|+||||||+||+++.++.++++||
T Consensus 121 e~~~~~~L~~~~~~~~----~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Df 185 (335)
T 2owb_A 121 ELCRRRSLLELHKRRK----ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDF 185 (335)
T ss_dssp CCCTTCBHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCC
T ss_pred ecCCCCCHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeec
Confidence 9999999999987653 389999999999999999999999 9999999999999999999999998
No 135
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=99.90 E-value=8.9e-24 Score=200.87 Aligned_cols=142 Identities=27% Similarity=0.361 Sum_probs=126.3
Q ss_pred cCCCCCCccCccCCceEEEEEeC-CCCEEEEEEccccccc-----ccHHHHHHHHHHHhcCCCCCccceeeEEecCCeee
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS-----GGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKL 372 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~-----~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 372 (451)
++|...+.||+|+||.||+|+.. +++.||+|.++..... .....+.+|+.++..++||||+++++++......+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 45777899999999999999975 6899999998654321 12457899999999999999999999999999999
Q ss_pred EEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCC----Cccchhh
Q 013004 373 LVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDA----DQSSKTI 447 (451)
Q Consensus 373 lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~----~~~i~df 447 (451)
+||||+++++|.+++.... .+++.++..++.|++.||.|||+. +|+||||||+||+++.++ .++++||
T Consensus 85 lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~kl~df 156 (283)
T 3bhy_A 85 LILELVSGGELFDFLAEKE----SLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDF 156 (283)
T ss_dssp EEEECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCEEECCC
T ss_pred EEEeecCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCceEEEec
Confidence 9999999999999997653 389999999999999999999999 999999999999999887 7899998
No 136
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=99.90 E-value=1.5e-24 Score=206.69 Aligned_cols=144 Identities=28% Similarity=0.410 Sum_probs=128.4
Q ss_pred HhcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEE
Q 013004 297 ATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 375 (451)
Q Consensus 297 ~~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (451)
..++|+..+.||+|+||.||+|+.. +++.||+|.++... .....+.+|+.+++.++||||+++++++...+..++||
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 88 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT--MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 88 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS--THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEE
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH--HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEE
Confidence 4566778899999999999999975 47899999986532 23457899999999999999999999999999999999
Q ss_pred ecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 376 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 376 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
||+++|+|.+++..... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.++++||
T Consensus 89 e~~~~~~L~~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Df 155 (288)
T 3kfa_A 89 EFMTYGNLLDYLRECNR--QEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADF 155 (288)
T ss_dssp ECCTTEEHHHHHHHCCT--TTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCC
T ss_pred EcCCCCcHHHHHHhccc--CCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccC
Confidence 99999999999987533 3489999999999999999999999 9999999999999999999999998
No 137
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=99.90 E-value=5.7e-24 Score=203.87 Aligned_cols=143 Identities=33% Similarity=0.464 Sum_probs=122.7
Q ss_pred cCCCCCCccCccCCceEEEEEeCC----CCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEec-CCeeeE
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLAD----GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTT-VTEKLL 373 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~~----~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~-~~~~~l 373 (451)
..|+..+.||+|+||.||+|+..+ ...||+|.++..........+.+|+.+++.++||||+++++++.+ .+..++
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 104 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 104 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence 346677899999999999998643 236899998754433344578999999999999999999998654 557899
Q ss_pred EEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 374 VYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 374 v~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
||||+++|+|.+++.... ..+++.++..++.|++.||+|||++ +|+||||||+||++++++.+|++||
T Consensus 105 v~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Df 172 (298)
T 3f66_A 105 VLPYMKHGDLRNFIRNET---HNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADF 172 (298)
T ss_dssp EEECCTTCBHHHHHHCTT---CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSC
T ss_pred EEeCCCCCCHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECcc
Confidence 999999999999997643 2478999999999999999999999 9999999999999999999999998
No 138
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=99.90 E-value=7.3e-24 Score=200.71 Aligned_cols=143 Identities=24% Similarity=0.414 Sum_probs=127.7
Q ss_pred hcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEccccc--ccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEE
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEER--TSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLV 374 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 374 (451)
.++|...+.||+|+||.||+|+.. +++.||||.++... .......+.+|+..++.++||||+++++++...+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV 89 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence 356778899999999999999975 68999999986532 122344789999999999999999999999999999999
Q ss_pred EecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 375 YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 375 ~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|||+++++|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+||+++.++.++++||
T Consensus 90 ~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~df 155 (276)
T 2h6d_A 90 MEYVSGGELFDYICKHG----RVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADF 155 (276)
T ss_dssp EECCCSCBHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCC
T ss_pred EeccCCCcHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeec
Confidence 99999999999997653 388999999999999999999999 9999999999999999999999997
No 139
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=99.90 E-value=1.1e-23 Score=202.35 Aligned_cols=141 Identities=31% Similarity=0.475 Sum_probs=127.7
Q ss_pred cCCCCCCccCccCCceEEEEEe-CCCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEec
Q 013004 299 DGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 377 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey 377 (451)
+.|+..+.||+|+||.||+|+. .+++.||||.++..........+.+|+.++..++||||+++++++......++||||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 101 (303)
T 3a7i_A 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY 101 (303)
T ss_dssp GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEe
Confidence 4577789999999999999986 468999999987654444456799999999999999999999999999999999999
Q ss_pred CCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 378 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 378 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+++++|.+++... .+++..+..++.|++.||.|||+. +|+||||||+||+++.++.++++||
T Consensus 102 ~~~~~L~~~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Df 163 (303)
T 3a7i_A 102 LGGGSALDLLEPG-----PLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADF 163 (303)
T ss_dssp CTTEEHHHHHTTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCC
T ss_pred CCCCcHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeec
Confidence 9999999998643 389999999999999999999999 9999999999999999999999998
No 140
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=99.90 E-value=4.2e-24 Score=209.87 Aligned_cols=142 Identities=31% Similarity=0.454 Sum_probs=124.0
Q ss_pred cCCCCCCccCccCCceEEEEEe-CCCCEEEEEEcccccccc--cHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEE
Q 013004 299 DGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSG--GELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 375 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (451)
+.|+..+.||+|+||.||+|+. .+++.||||++....... ....+.+|+.+++.++||||+++++++...+..++||
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 133 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 133 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence 3477778999999999999986 578999999986443222 2346899999999999999999999999999999999
Q ss_pred ecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 376 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 376 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
||+. |++.+.+..... .+++.++..++.|++.||.|||+. +|+||||||+|||++.++.+||+||
T Consensus 134 e~~~-g~l~~~l~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Df 198 (348)
T 1u5q_A 134 EYCL-GSASDLLEVHKK---PLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDF 198 (348)
T ss_dssp ECCS-EEHHHHHHHHTS---CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCC
T ss_pred ecCC-CCHHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeec
Confidence 9997 688888865432 489999999999999999999999 9999999999999999999999998
No 141
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=99.90 E-value=9.4e-24 Score=203.80 Aligned_cols=143 Identities=23% Similarity=0.318 Sum_probs=128.1
Q ss_pred hcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEccccccccc--HHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEE
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGG--ELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLV 374 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 374 (451)
.++|...+.||+|+||.||+|+.. +++.||+|+++....... ...+.+|+.++..++||||+++++++...+..++|
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD 112 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence 467888899999999999999975 688999999975433222 24689999999999999999999999999999999
Q ss_pred EecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 375 YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 375 ~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+||+++++|.+++.... .+++.++..++.|++.||.|||+. +|+||||||+||+++.++.++++||
T Consensus 113 ~e~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Df 178 (309)
T 2h34_A 113 MRLINGVDLAAMLRRQG----PLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDF 178 (309)
T ss_dssp EECCCCEEHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSC
T ss_pred EEecCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecC
Confidence 99999999999998753 389999999999999999999999 9999999999999999999999998
No 142
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=99.90 E-value=6.4e-24 Score=203.29 Aligned_cols=141 Identities=28% Similarity=0.402 Sum_probs=121.9
Q ss_pred CCCCCccCccCCceEEEEEeC-CC---CEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCee-eEEE
Q 013004 301 FSNKNILGRGGFGKVYKGRLA-DG---KLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEK-LLVY 375 (451)
Q Consensus 301 f~~~~~lG~G~fg~Vy~~~~~-~~---~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~-~lv~ 375 (451)
|...+.||+|+||.||+|++. ++ ..||+|.++..........+.+|+.+++.++||||+++++++.+.+.. ++++
T Consensus 23 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~ 102 (298)
T 3pls_A 23 THSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLL 102 (298)
T ss_dssp EEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEE
T ss_pred EccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEE
Confidence 444588999999999999853 23 379999987544333445789999999999999999999999876665 9999
Q ss_pred ecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 376 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 376 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
||+.+|+|.+++.... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+|++||
T Consensus 103 e~~~~~~L~~~~~~~~---~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Df 168 (298)
T 3pls_A 103 PYMCHGDLLQFIRSPQ---RNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADF 168 (298)
T ss_dssp CCCTTCBHHHHHHCTT---CCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCT
T ss_pred ecccCCCHHHHHhccc---cCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcC
Confidence 9999999999997643 2478999999999999999999999 9999999999999999999999998
No 143
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=99.90 E-value=5.5e-24 Score=204.12 Aligned_cols=149 Identities=28% Similarity=0.386 Sum_probs=114.5
Q ss_pred HHhcCCCCCCccCccCCceEEEEEe-CCCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEE
Q 013004 296 VATDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLV 374 (451)
Q Consensus 296 ~~~~~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 374 (451)
...++|...+.||+|+||.||+|+. .+++.||||++..........++.+|+.++..++||||+++++++...+..++|
T Consensus 12 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 91 (303)
T 2vwi_A 12 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLV 91 (303)
T ss_dssp -CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEE
T ss_pred cchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEE
Confidence 4457888899999999999999986 468899999986544333445788999999999999999999999999999999
Q ss_pred EecCCCCChhHHhhcc----CCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 375 YPYMTNGSVASRLRER----QSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 375 ~ey~~~gsL~~~l~~~----~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|||+++|+|.+++... ......+++..+..++.|++.||.|||+. +|+||||||+||+++.++.++++||
T Consensus 92 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~df 165 (303)
T 2vwi_A 92 MKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADF 165 (303)
T ss_dssp EECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCC
T ss_pred ehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEEec
Confidence 9999999999998742 11123489999999999999999999999 9999999999999999999999998
No 144
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=99.90 E-value=1.1e-23 Score=200.24 Aligned_cols=143 Identities=22% Similarity=0.322 Sum_probs=126.2
Q ss_pred hcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEccccccc-ccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEE
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS-GGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 375 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (451)
.++|+..+.||+|+||.||+|... +++.||+|++...... .....+.+|+.++..++||||+++++++...+..++||
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 84 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 84 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence 467888899999999999999874 5889999998654322 22346889999999999999999999999999999999
Q ss_pred ecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCC---ccchhh
Q 013004 376 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDAD---QSSKTI 447 (451)
Q Consensus 376 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~---~~i~df 447 (451)
||+++|+|.+.+.... .+++..+..++.|++.||.|||+. +|+||||||+||+++.++. ++++||
T Consensus 85 e~~~~~~l~~~~~~~~----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Df 152 (284)
T 3kk8_A 85 DLVTGGELFEDIVARE----FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADF 152 (284)
T ss_dssp CCCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCC
T ss_pred ecCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeec
Confidence 9999999999887653 389999999999999999999999 9999999999999987665 899998
No 145
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=99.90 E-value=7.6e-24 Score=206.32 Aligned_cols=139 Identities=19% Similarity=0.261 Sum_probs=123.2
Q ss_pred cCCCCCCccCccCCceEEEEEe-CCCCEEEEEEcccccccccHHHHHHHHHHHhcC-CCCCccceeeEEecCCeeeEEEe
Q 013004 299 DGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMA-VHRNLLRLYGFCTTVTEKLLVYP 376 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~e 376 (451)
++|...+.||+|+||+||+|+. .+++.||||.++.... ...+.+|+.++..+ +||||+++++++...+..++|||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e 85 (330)
T 2izr_A 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR---APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLE 85 (330)
T ss_dssp TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS---SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEE
T ss_pred CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc---hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEE
Confidence 5688889999999999999996 5689999999864322 23588999999999 89999999999999999999999
Q ss_pred cCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCC-----ccchhh
Q 013004 377 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDAD-----QSSKTI 447 (451)
Q Consensus 377 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~-----~~i~df 447 (451)
|+ +|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++. +||+||
T Consensus 86 ~~-~~~L~~~~~~~~---~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DF 154 (330)
T 2izr_A 86 LL-GPSLEDLFDLCD---RTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDF 154 (330)
T ss_dssp CC-CCBHHHHHHHTT---TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCC
T ss_pred eC-CCCHHHHHHHcC---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEc
Confidence 99 999999998642 2489999999999999999999999 9999999999999999887 999998
No 146
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.90 E-value=6e-24 Score=202.75 Aligned_cols=141 Identities=23% Similarity=0.354 Sum_probs=122.4
Q ss_pred CCCCCC-ccCccCCceEEEEEeC---CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEE
Q 013004 300 GFSNKN-ILGRGGFGKVYKGRLA---DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 375 (451)
Q Consensus 300 ~f~~~~-~lG~G~fg~Vy~~~~~---~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (451)
+|...+ .||+|+||.||+|.+. +++.||||.++..........+.+|+.++..++||||+++++++ ..+..++||
T Consensus 10 ~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv~ 88 (287)
T 1u59_A 10 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVM 88 (287)
T ss_dssp GEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEEE
T ss_pred HhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEEE
Confidence 344444 8999999999999864 57789999997654333445789999999999999999999999 456689999
Q ss_pred ecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 376 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 376 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
||+++|+|.+++.... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.++++||
T Consensus 89 e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Df 154 (287)
T 1u59_A 89 EMAGGGPLHKFLVGKR---EEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDF 154 (287)
T ss_dssp ECCTTEEHHHHHTTCT---TTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCC
T ss_pred EeCCCCCHHHHHHhCC---ccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcc
Confidence 9999999999997543 2489999999999999999999999 9999999999999999999999998
No 147
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=99.90 E-value=1.9e-23 Score=203.29 Aligned_cols=133 Identities=20% Similarity=0.337 Sum_probs=118.4
Q ss_pred CCccCccCCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHHHhcCC-CCCccceeeEEecCCeeeEEEecCCCC
Q 013004 304 KNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAV-HRNLLRLYGFCTTVTEKLLVYPYMTNG 381 (451)
Q Consensus 304 ~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lv~ey~~~g 381 (451)
.+.||+|+||.||+|+.. +++.||||++... ....+.+|+.++..+. ||||+++++++.+....++||||+++|
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~ 91 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR----MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGG 91 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG----GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh----hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCC
Confidence 478999999999999975 6899999998542 2346789999999997 999999999999999999999999999
Q ss_pred ChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCC---Cccchhh
Q 013004 382 SVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDA---DQSSKTI 447 (451)
Q Consensus 382 sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~---~~~i~df 447 (451)
+|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+|||++.++ .+||+||
T Consensus 92 ~L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Df 153 (325)
T 3kn6_A 92 ELFERIKKKK----HFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDF 153 (325)
T ss_dssp BHHHHHHHCS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCC
T ss_pred cHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEecc
Confidence 9999998753 389999999999999999999999 999999999999998765 7899998
No 148
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=99.90 E-value=4.2e-24 Score=202.67 Aligned_cols=147 Identities=24% Similarity=0.353 Sum_probs=126.0
Q ss_pred hcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEccccccc-ccHHHHHHHHHHHhcCCCCCccceeeEEe--cCCeeeE
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS-GGELQFQTEVKIISMAVHRNLLRLYGFCT--TVTEKLL 373 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~--~~~~~~l 373 (451)
.++|+..+.||+|+||.||+|+.. +++.||+|.++..... .....+.+|+.+++.++||||+++++++. .....++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 356778899999999999999875 6899999998654322 23346899999999999999999999875 3667899
Q ss_pred EEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCC-----eeecCCCCCceeeCCCCCccchhh
Q 013004 374 VYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPK-----IIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 374 v~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~-----iiHrDlK~~NILld~~~~~~i~df 447 (451)
||||+++|+|.+++.........+++..+..++.|++.||+|||+. + |+||||||+||+++.++.++++||
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~~~~kl~df 160 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGKQNVKLGDF 160 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSSSCEEECCC
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCCCCEEEecC
Confidence 9999999999999986543334589999999999999999999998 6 999999999999999999999998
No 149
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=99.90 E-value=8e-24 Score=213.15 Aligned_cols=144 Identities=24% Similarity=0.345 Sum_probs=122.3
Q ss_pred HHhcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEccccccc-------ccHHHHHHHHHHHhcCCCCCccceeeEEec
Q 013004 296 VATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS-------GGELQFQTEVKIISMAVHRNLLRLYGFCTT 367 (451)
Q Consensus 296 ~~~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~-------~~~~~~~~E~~~l~~l~H~niv~l~~~~~~ 367 (451)
...++|...+.||+|+||.||+|... +++.||||++...... .....+.+|+.+++.++||||+++++++.
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~- 210 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD- 210 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-
Confidence 34678999999999999999999864 5899999998653211 11225889999999999999999999975
Q ss_pred CCeeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCC---Cccc
Q 013004 368 VTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDA---DQSS 444 (451)
Q Consensus 368 ~~~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~---~~~i 444 (451)
.+..++||||+++|+|.+++.... .+++.++..++.|++.||+|||++ +|+||||||+|||++.++ .+||
T Consensus 211 ~~~~~lv~e~~~~g~L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kl 283 (419)
T 3i6u_A 211 AEDYYIVLELMEGGELFDKVVGNK----RLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKI 283 (419)
T ss_dssp SSEEEEEEECCTTCBGGGGTSSSC----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSCCEEE
T ss_pred cCceEEEEEcCCCCcHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcceEEE
Confidence 456899999999999999887543 489999999999999999999999 999999999999997654 4999
Q ss_pred hhh
Q 013004 445 KTI 447 (451)
Q Consensus 445 ~df 447 (451)
+||
T Consensus 284 ~DF 286 (419)
T 3i6u_A 284 TDF 286 (419)
T ss_dssp CCS
T ss_pred eec
Confidence 998
No 150
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=99.90 E-value=9.9e-24 Score=205.19 Aligned_cols=147 Identities=31% Similarity=0.415 Sum_probs=124.4
Q ss_pred hcCCCCCCccCccCCceEEEEEe------CCCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCee
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRL------ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEK 371 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~------~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 371 (451)
.++|...+.||+|+||.||+|++ .+++.||||.++.........++.+|+.++..++||||+++++++......
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 108 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence 46788889999999999999984 246789999996544444445789999999999999999999999999999
Q ss_pred eEEEecCCCCChhHHhhccCCC---CCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCC---CCccch
Q 013004 372 LLVYPYMTNGSVASRLRERQSS---LPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDED---ADQSSK 445 (451)
Q Consensus 372 ~lv~ey~~~gsL~~~l~~~~~~---~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~---~~~~i~ 445 (451)
++||||+++|+|.+++...... ...+++.++..++.|++.||.|||+. +|+||||||+|||++.+ ..++++
T Consensus 109 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~~~kl~ 185 (327)
T 2yfx_A 109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIG 185 (327)
T ss_dssp EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcceEEEC
Confidence 9999999999999999875421 13488999999999999999999999 99999999999999954 458999
Q ss_pred hh
Q 013004 446 TI 447 (451)
Q Consensus 446 df 447 (451)
||
T Consensus 186 Df 187 (327)
T 2yfx_A 186 DF 187 (327)
T ss_dssp CC
T ss_pred cc
Confidence 87
No 151
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=99.90 E-value=5.4e-24 Score=202.04 Aligned_cols=142 Identities=29% Similarity=0.434 Sum_probs=124.9
Q ss_pred hcCCCCCCccCccCCceEEEEEeCCCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEec
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 377 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey 377 (451)
.++|+..+.||+|+||.||+|+..+++.||||.++... .....+.+|+.++..++||||+++++++. .+..++||||
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~ 88 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS--MSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEY 88 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS--SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEEC
T ss_pred HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc--ccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEec
Confidence 45677789999999999999998888899999986533 23457899999999999999999999876 4568999999
Q ss_pred CCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 378 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 378 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+++|+|.+++..... ..+++.++..++.|++.||.|||++ +|+||||||+||++++++.++++||
T Consensus 89 ~~~~~L~~~l~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Df 153 (279)
T 1qpc_A 89 MENGSLVDFLKTPSG--IKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADF 153 (279)
T ss_dssp CTTCBHHHHTTSHHH--HTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCC
T ss_pred CCCCCHHHHHhcCCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCC
Confidence 999999999975421 1388999999999999999999999 9999999999999999999999998
No 152
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=99.90 E-value=1.1e-23 Score=208.80 Aligned_cols=137 Identities=25% Similarity=0.365 Sum_probs=116.2
Q ss_pred CCccCccCCceEEEEEe-CCCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEecCCCCC
Q 013004 304 KNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGS 382 (451)
Q Consensus 304 ~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~gs 382 (451)
.+.||+|+||.||+|+. .+|+.||+|+++.... .....+.+|+.++..++||||+++++++.+.+..++||||+++|+
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~ 172 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGM-KDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGE 172 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSH-HHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCE
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEccccc-ccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCc
Confidence 46799999999999986 4689999999865432 234478999999999999999999999999999999999999999
Q ss_pred hhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceee--CCCCCccchhh
Q 013004 383 VASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILL--DEDADQSSKTI 447 (451)
Q Consensus 383 L~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILl--d~~~~~~i~df 447 (451)
|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+|||+ ++++.+||+||
T Consensus 173 L~~~l~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DF 233 (373)
T 2x4f_A 173 LFDRIIDESY---NLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDF 233 (373)
T ss_dssp EHHHHHHTGG---GCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCC
T ss_pred HHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeC
Confidence 9998875432 388999999999999999999999 99999999999999 56678999998
No 153
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=99.90 E-value=1.1e-23 Score=203.07 Aligned_cols=146 Identities=20% Similarity=0.314 Sum_probs=125.8
Q ss_pred cCCCCCCccCccCCceEEEEEe-CCCCEEEEEEccccccc--ccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEE
Q 013004 299 DGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTS--GGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 375 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (451)
++|...+.||+|+||.||+|+. .+++.||||+++..... .....+.+|+.++..++||||+++++++...+..++||
T Consensus 32 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 111 (310)
T 2wqm_A 32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 111 (310)
T ss_dssp GGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEE
Confidence 4577789999999999999986 46899999998653222 22346899999999999999999999999999999999
Q ss_pred ecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 376 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 376 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
||+++|+|.+++.........+++..+..++.|++.||.|||+. +|+||||||+||+++.++.++++||
T Consensus 112 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Df 180 (310)
T 2wqm_A 112 ELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDL 180 (310)
T ss_dssp ECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC
T ss_pred ecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEec
Confidence 99999999999875322233589999999999999999999999 9999999999999999999999998
No 154
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=99.90 E-value=6.3e-24 Score=208.16 Aligned_cols=144 Identities=26% Similarity=0.354 Sum_probs=127.1
Q ss_pred hcCCCCCCccCccCCceEEEEEeCCCCEEEEEEccccccccc----------------HHHHHHHHHHHhcCCCCCccce
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGG----------------ELQFQTEVKIISMAVHRNLLRL 361 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~----------------~~~~~~E~~~l~~l~H~niv~l 361 (451)
.++|...+.||+|+||.||+|+. +++.||||.+........ ...+.+|+.++..++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 45788889999999999999999 899999999865432211 1579999999999999999999
Q ss_pred eeEEecCCeeeEEEecCCCCChhHH------hhccCCCCCCCCHHHHHHHHHHHHHHHHhHhc-CCCCCeeecCCCCCce
Q 013004 362 YGFCTTVTEKLLVYPYMTNGSVASR------LRERQSSLPPLDWPTRKKIALGSARGLSYLHE-HCDPKIIHRDVKAANI 434 (451)
Q Consensus 362 ~~~~~~~~~~~lv~ey~~~gsL~~~------l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~-~~~~~iiHrDlK~~NI 434 (451)
++++.+.+..++||||+++|+|.++ +.... ...+++..+..++.|++.||.|||+ . +|+||||||+||
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl~p~Ni 183 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNY--TCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVKPSNI 183 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSS--CCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCCCGGGE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhcc--ccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCCChHhE
Confidence 9999999999999999999999998 54321 2458999999999999999999998 7 999999999999
Q ss_pred eeCCCCCccchhh
Q 013004 435 LLDEDADQSSKTI 447 (451)
Q Consensus 435 Lld~~~~~~i~df 447 (451)
+++.++.++++||
T Consensus 184 l~~~~~~~kl~df 196 (348)
T 2pml_X 184 LMDKNGRVKLSDF 196 (348)
T ss_dssp EECTTSCEEECCC
T ss_pred EEcCCCcEEEecc
Confidence 9999999999998
No 155
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=99.90 E-value=3.5e-24 Score=209.68 Aligned_cols=150 Identities=21% Similarity=0.260 Sum_probs=125.4
Q ss_pred HHHhcCCCCCCccCccCCceEEEEEe-CCCCEEEEEEccccc----ccccHHHHHHHHHHHhcCCCCCccceeeEEecCC
Q 013004 295 QVATDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEER----TSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVT 369 (451)
Q Consensus 295 ~~~~~~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~----~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~ 369 (451)
....++|...+.||+|+||.||+|+. .+++.||+|+++... .......+.+|+.+++.++||||+++++++.+.+
T Consensus 22 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~ 101 (345)
T 3hko_A 22 LELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQ 101 (345)
T ss_dssp HHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred hhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCC
Confidence 44567788899999999999999987 468899999986542 1233457899999999999999999999999999
Q ss_pred eeeEEEecCCCCChhHHhhccCCC------------------------------------CCCCCHHHHHHHHHHHHHHH
Q 013004 370 EKLLVYPYMTNGSVASRLRERQSS------------------------------------LPPLDWPTRKKIALGSARGL 413 (451)
Q Consensus 370 ~~~lv~ey~~~gsL~~~l~~~~~~------------------------------------~~~l~~~~~~~i~~~ia~~L 413 (451)
..++||||+++|+|.+++...... ...+++..+..++.|++.||
T Consensus 102 ~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l 181 (345)
T 3hko_A 102 YICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSAL 181 (345)
T ss_dssp EEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHH
Confidence 999999999999999998531100 11135667788999999999
Q ss_pred HhHhcCCCCCeeecCCCCCceeeCCCC--Cccchhh
Q 013004 414 SYLHEHCDPKIIHRDVKAANILLDEDA--DQSSKTI 447 (451)
Q Consensus 414 ~yLH~~~~~~iiHrDlK~~NILld~~~--~~~i~df 447 (451)
+|||+. +|+||||||+|||++.++ .+||+||
T Consensus 182 ~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Df 214 (345)
T 3hko_A 182 HYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDF 214 (345)
T ss_dssp HHHHHT---TEECCCCCGGGEEESCSSSCCEEECCC
T ss_pred HHHHHC---CccccCCChhhEEEecCCCceEEEeec
Confidence 999999 999999999999999876 8999998
No 156
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=99.90 E-value=1.1e-23 Score=200.64 Aligned_cols=142 Identities=29% Similarity=0.462 Sum_probs=126.9
Q ss_pred cCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccc--cccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEE
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 375 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (451)
++|+..+.||+|+||.||+|+.. +++.||||.+..... ......+.+|+.++..++||||+++++++.+.+..++||
T Consensus 14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 93 (284)
T 2vgo_A 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLML 93 (284)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEE
Confidence 56788899999999999999975 578899999864321 222357899999999999999999999999999999999
Q ss_pred ecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 376 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 376 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
||+++|+|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+||+++.++.++++||
T Consensus 94 e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Df 158 (284)
T 2vgo_A 94 EFAPRGELYKELQKHG----RFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADF 158 (284)
T ss_dssp CCCTTEEHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCC
T ss_pred EeCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecc
Confidence 9999999999998753 388999999999999999999999 9999999999999999999999998
No 157
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=99.90 E-value=5.9e-24 Score=209.53 Aligned_cols=152 Identities=20% Similarity=0.277 Sum_probs=130.3
Q ss_pred cccHHHHHHHhcCCCCCCccCccCCceEEEEEe-CCCCEEEEEEcccccccccHHHHHHHHHHHhcCC-----CCCccce
Q 013004 288 RFSLRELQVATDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAV-----HRNLLRL 361 (451)
Q Consensus 288 ~~~~~~~~~~~~~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~-----H~niv~l 361 (451)
.+++.+.....++|...+.||+|+||.||+|+. .+++.||||+++... .....+..|+.++..++ ||||+++
T Consensus 24 ~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~h~~iv~~ 101 (360)
T 3llt_A 24 HFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIK--KYTRSAKIEADILKKIQNDDINNNNIVKY 101 (360)
T ss_dssp SCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCH--HHHHHHHHHHHHHHHTCCCSTTGGGBCCE
T ss_pred eeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccch--hhhhhhHHHHHHHHHhcccCCCCCCeecc
Confidence 445555555678899999999999999999997 468899999986422 22345778999998886 9999999
Q ss_pred eeEEecCCeeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCC---
Q 013004 362 YGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDE--- 438 (451)
Q Consensus 362 ~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~--- 438 (451)
++++...+..++||||+ +++|.+++..... ..+++.++..++.|++.||+|||+. +|+||||||+|||+++
T Consensus 102 ~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~ 175 (360)
T 3llt_A 102 HGKFMYYDHMCLIFEPL-GPSLYEIITRNNY--NGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDDPYF 175 (360)
T ss_dssp EEEEEETTEEEEEECCC-CCBHHHHHHHTTT--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCTTC
T ss_pred cceeeECCeeEEEEcCC-CCCHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEccccc
Confidence 99999999999999999 9999999987543 2489999999999999999999999 9999999999999986
Q ss_pred ----------------------CCCccchhh
Q 013004 439 ----------------------DADQSSKTI 447 (451)
Q Consensus 439 ----------------------~~~~~i~df 447 (451)
++.+||+||
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DF 206 (360)
T 3llt_A 176 EKSLITVRRVTDGKKIQIYRTKSTGIKLIDF 206 (360)
T ss_dssp CEEEEEEECTTTCCEEEEEEESCCCEEECCC
T ss_pred cccccchhcccccccccccccCCCCEEEEec
Confidence 778999998
No 158
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=99.90 E-value=5.4e-24 Score=205.59 Aligned_cols=150 Identities=27% Similarity=0.442 Sum_probs=122.2
Q ss_pred HHHhcCCCCCCccCccCCceEEEEEeC----CCCEEEEEEcccccccc-cHHHHHHHHHHHhcCCCCCccceeeEEecCC
Q 013004 295 QVATDGFSNKNILGRGGFGKVYKGRLA----DGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHRNLLRLYGFCTTVT 369 (451)
Q Consensus 295 ~~~~~~f~~~~~lG~G~fg~Vy~~~~~----~~~~vAvK~~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~ 369 (451)
....++|...+.||+|+||.||+|+.. +++.||||.++...... ....+.+|+.++..++||||+++++++....
T Consensus 30 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~ 109 (313)
T 3brb_A 30 VIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMS 109 (313)
T ss_dssp BCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC--
T ss_pred ccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeecc
Confidence 344567888899999999999999753 34589999987543322 2346899999999999999999999998755
Q ss_pred e-----eeEEEecCCCCChhHHhhccC--CCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCc
Q 013004 370 E-----KLLVYPYMTNGSVASRLRERQ--SSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQ 442 (451)
Q Consensus 370 ~-----~~lv~ey~~~gsL~~~l~~~~--~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~ 442 (451)
. .++||||+++|+|.+++.... .....+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+
T Consensus 110 ~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~ 186 (313)
T 3brb_A 110 SQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMTV 186 (313)
T ss_dssp -----CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTTSCE
T ss_pred ccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcE
Confidence 3 499999999999999985432 2234589999999999999999999999 99999999999999999999
Q ss_pred cchhh
Q 013004 443 SSKTI 447 (451)
Q Consensus 443 ~i~df 447 (451)
|++||
T Consensus 187 kl~Df 191 (313)
T 3brb_A 187 CVADF 191 (313)
T ss_dssp EECSC
T ss_pred EEeec
Confidence 99998
No 159
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=99.90 E-value=1.2e-23 Score=205.13 Aligned_cols=142 Identities=25% Similarity=0.435 Sum_probs=125.3
Q ss_pred cCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccc-cHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEe
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 376 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 376 (451)
++|+..+.||+|+||.||+|+.. +++.||||++....... ....+.+|+.++..++||||+++++++...+..++|||
T Consensus 25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 104 (331)
T 4aaa_A 25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFE 104 (331)
T ss_dssp GGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEe
Confidence 45777899999999999999975 58999999985543222 23357899999999999999999999999999999999
Q ss_pred cCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 377 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 377 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|+++++|.++..... .+++..+..++.|++.||.|||+. +|+||||||+||+++.++.++|+||
T Consensus 105 ~~~~~~l~~~~~~~~----~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Df 168 (331)
T 4aaa_A 105 FVDHTILDDLELFPN----GLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDF 168 (331)
T ss_dssp CCSEEHHHHHHHSTT----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC
T ss_pred cCCcchHHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeC
Confidence 999999988776543 389999999999999999999999 9999999999999999999999998
No 160
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=99.90 E-value=9.4e-24 Score=213.49 Aligned_cols=142 Identities=25% Similarity=0.349 Sum_probs=124.3
Q ss_pred hcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEccccccc-ccHHHHHHHHHHHhcCCCCCccceeeEEecC-----Ce
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS-GGELQFQTEVKIISMAVHRNLLRLYGFCTTV-----TE 370 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-----~~ 370 (451)
.++|...+.||+|+||.||+|+.. +++.||||+++..... .....+.+|+.++..++||||+++++++... ..
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 457888899999999999999864 5889999999653322 2234789999999999999999999998765 56
Q ss_pred eeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 371 KLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 371 ~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
.++||||+. |+|.+++.... .+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+||
T Consensus 105 ~~lv~e~~~-~~L~~~~~~~~----~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DF 173 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFKTPI----FLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDF 173 (432)
T ss_dssp EEEEEECCS-EEHHHHHHSSC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCC
T ss_pred EEEEEecCC-cCHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccC
Confidence 899999987 59999997643 389999999999999999999999 9999999999999999999999998
No 161
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=99.90 E-value=1.2e-23 Score=204.90 Aligned_cols=143 Identities=27% Similarity=0.483 Sum_probs=124.3
Q ss_pred hcCCCCCCccCccCCceEEEEEeC-CCC----EEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeee
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLA-DGK----LVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKL 372 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~-~~~----~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 372 (451)
.++|+..+.||+|+||.||+|++. +++ .||+|.++..........+.+|+.+++.++||||+++++++.... .+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~ 92 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EE
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ce
Confidence 356788899999999999999864 444 357777765444445568999999999999999999999998754 78
Q ss_pred EEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 373 LVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 373 lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+++||+.+|+|.+++..... .+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+||
T Consensus 93 ~v~~~~~~g~L~~~l~~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~Df 161 (327)
T 3lzb_A 93 LITQLMPFGCLLDYVREHKD---NIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDF 161 (327)
T ss_dssp EEECCCSSCBHHHHHHHTTT---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCT
T ss_pred EEEEecCCCcHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccC
Confidence 99999999999999987543 489999999999999999999999 9999999999999999999999998
No 162
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=99.89 E-value=1e-23 Score=199.18 Aligned_cols=144 Identities=29% Similarity=0.447 Sum_probs=119.8
Q ss_pred hcCCCCCCccCccCCceEEEEEeCCCCEEEEEEccccccc---ccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEE
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTS---GGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLV 374 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 374 (451)
.++|+..+.||+|+||.||+|++. ++.||||+++..... .....+.+|+.+++.++||||+++++++...+..++|
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV 84 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred hhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 356777899999999999999984 889999998654322 2234689999999999999999999999999999999
Q ss_pred EecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCC--------CCCccchh
Q 013004 375 YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDE--------DADQSSKT 446 (451)
Q Consensus 375 ~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~--------~~~~~i~d 446 (451)
|||+++|+|.+++... .+++..+..++.|++.||.|||++...+|+||||||+||+++. ++.++++|
T Consensus 85 ~e~~~~~~L~~~~~~~-----~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~D 159 (271)
T 3dtc_A 85 MEFARGGPLNRVLSGK-----RIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITD 159 (271)
T ss_dssp EECCTTEEHHHHHTSS-----CCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECC
T ss_pred EEcCCCCCHHHHhhcC-----CCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEcc
Confidence 9999999999998643 3899999999999999999999982233999999999999996 66789999
Q ss_pred h
Q 013004 447 I 447 (451)
Q Consensus 447 f 447 (451)
|
T Consensus 160 f 160 (271)
T 3dtc_A 160 F 160 (271)
T ss_dssp C
T ss_pred C
Confidence 8
No 163
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=99.89 E-value=1.8e-23 Score=215.54 Aligned_cols=143 Identities=22% Similarity=0.373 Sum_probs=123.4
Q ss_pred hcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEccccccc------------ccHHHHHHHHHHHhcCCCCCccceeeE
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS------------GGELQFQTEVKIISMAVHRNLLRLYGF 364 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~------------~~~~~~~~E~~~l~~l~H~niv~l~~~ 364 (451)
.++|...+.||+|+||+||+|+.. +++.||||+++..... .....+.+|+.+++.++||||++++++
T Consensus 35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~ 114 (504)
T 3q5i_A 35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV 114 (504)
T ss_dssp GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 467888899999999999999975 5789999998654321 223468899999999999999999999
Q ss_pred EecCCeeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCC---C
Q 013004 365 CTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDA---D 441 (451)
Q Consensus 365 ~~~~~~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~---~ 441 (451)
+.+....++||||+++|+|.+.+.... .+++..+..++.|++.||.|||+. +|+||||||+|||++.++ .
T Consensus 115 ~~~~~~~~lv~e~~~gg~L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~ 187 (504)
T 3q5i_A 115 FEDKKYFYLVTEFYEGGELFEQIINRH----KFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLN 187 (504)
T ss_dssp EECSSEEEEEEECCTTCBHHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESSTTCCSS
T ss_pred EEcCCEEEEEEecCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecCCCCcc
Confidence 999999999999999999999997753 389999999999999999999999 999999999999999876 5
Q ss_pred ccchhh
Q 013004 442 QSSKTI 447 (451)
Q Consensus 442 ~~i~df 447 (451)
+||+||
T Consensus 188 ~kl~Df 193 (504)
T 3q5i_A 188 IKIVDF 193 (504)
T ss_dssp EEECCC
T ss_pred EEEEEC
Confidence 899998
No 164
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=99.89 E-value=1.9e-23 Score=208.27 Aligned_cols=142 Identities=24% Similarity=0.404 Sum_probs=115.8
Q ss_pred HhcCCCCCCccCccCCceEEEEEe-CCCCEEEEEEcccccc-cccHHHHHHHHHHHhcCC-CCCccceeeEEecCC--ee
Q 013004 297 ATDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERT-SGGELQFQTEVKIISMAV-HRNLLRLYGFCTTVT--EK 371 (451)
Q Consensus 297 ~~~~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~-~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~--~~ 371 (451)
..++|+..+.||+|+||.||+|.. .+++.||||++..... ......+.+|+.++..+. ||||+++++++...+ ..
T Consensus 7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~ 86 (388)
T 3oz6_A 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV 86 (388)
T ss_dssp HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence 456788899999999999999986 4689999999854322 223346789999999997 999999999997544 68
Q ss_pred eEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 372 LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 372 ~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
++||||++ |+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+||
T Consensus 87 ~lv~e~~~-~~L~~~~~~~-----~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DF 153 (388)
T 3oz6_A 87 YLVFDYME-TDLHAVIRAN-----ILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADF 153 (388)
T ss_dssp EEEEECCS-EEHHHHHHHT-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCC
T ss_pred EEEecccC-cCHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCC
Confidence 99999998 6999998763 388999999999999999999999 9999999999999999999999998
No 165
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=99.89 E-value=1.5e-23 Score=215.06 Aligned_cols=143 Identities=27% Similarity=0.457 Sum_probs=126.8
Q ss_pred hcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccc--cccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEE
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLV 374 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 374 (451)
.++|...+.||+|+||.||+|+.. +++.||||++..... ......+.+|+.++..++||||+++++++.+....++|
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 104 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV 104 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 356778899999999999999975 689999999864432 23345789999999999999999999999999999999
Q ss_pred EecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeC---CCCCccchhh
Q 013004 375 YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLD---EDADQSSKTI 447 (451)
Q Consensus 375 ~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld---~~~~~~i~df 447 (451)
|||+.+|+|.+.+.... .+++..+..++.|++.||.|||++ +|+||||||+|||++ .++.+||+||
T Consensus 105 ~e~~~~~~L~~~~~~~~----~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Df 173 (484)
T 3nyv_A 105 GEVYTGGELFDEIISRK----RFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDF 173 (484)
T ss_dssp ECCCCSCBHHHHHHTCS----CCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCT
T ss_pred EecCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEee
Confidence 99999999999997653 389999999999999999999999 999999999999994 5678999998
No 166
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=99.89 E-value=1.9e-23 Score=200.52 Aligned_cols=143 Identities=25% Similarity=0.414 Sum_probs=125.4
Q ss_pred hcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEe
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 376 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 376 (451)
.+.|+..+.||+|+||.||+|+.. +++.||+|.+.... ......+.+|+.++..++||||+++++++...+..++|||
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 96 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS-EEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIE 96 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC-----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEE
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCC-HHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEE
Confidence 456788899999999999999975 58999999986543 2334578999999999999999999999999999999999
Q ss_pred cCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 377 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 377 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|+++|+|.+++..... .+++..+..++.|++.||.|||+. +|+||||||+||+++.++.++++||
T Consensus 97 ~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Df 161 (302)
T 2j7t_A 97 FCPGGAVDAIMLELDR---GLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADF 161 (302)
T ss_dssp CCTTEEHHHHHHHHTS---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCC
T ss_pred eCCCCcHHHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEEC
Confidence 9999999999876432 389999999999999999999999 9999999999999999999999998
No 167
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=99.89 E-value=2.2e-23 Score=206.15 Aligned_cols=147 Identities=23% Similarity=0.318 Sum_probs=129.1
Q ss_pred HHHHhcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccc-------cHHHHHHHHHHHhcC-CCCCccceeeE
Q 013004 294 LQVATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSG-------GELQFQTEVKIISMA-VHRNLLRLYGF 364 (451)
Q Consensus 294 ~~~~~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~-------~~~~~~~E~~~l~~l-~H~niv~l~~~ 364 (451)
.....++|...+.||+|+||.||+|+.. +|+.||||+++...... ....+.+|+.++..+ +||||++++++
T Consensus 89 ~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~ 168 (365)
T 2y7j_A 89 AKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDS 168 (365)
T ss_dssp HHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEE
T ss_pred hhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEE
Confidence 3445567888999999999999999975 69999999986543211 123578999999998 79999999999
Q ss_pred EecCCeeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccc
Q 013004 365 CTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSS 444 (451)
Q Consensus 365 ~~~~~~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i 444 (451)
+......++||||+++|+|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+++
T Consensus 169 ~~~~~~~~lv~e~~~g~~L~~~l~~~~----~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~~ikl 241 (365)
T 2y7j_A 169 YESSSFMFLVFDLMRKGELFDYLTEKV----ALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQIRL 241 (365)
T ss_dssp EEBSSEEEEEECCCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEE
T ss_pred EeeCCEEEEEEEeCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEE
Confidence 999999999999999999999998653 389999999999999999999999 9999999999999999999999
Q ss_pred hhh
Q 013004 445 KTI 447 (451)
Q Consensus 445 ~df 447 (451)
+||
T Consensus 242 ~Df 244 (365)
T 2y7j_A 242 SDF 244 (365)
T ss_dssp CCC
T ss_pred Eec
Confidence 998
No 168
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=99.89 E-value=1.4e-23 Score=205.16 Aligned_cols=147 Identities=23% Similarity=0.317 Sum_probs=123.2
Q ss_pred hcCCCCCCccCccCCceEEEEEe-CCCCEEEEEEcccccccccHHHHHHHHHH-HhcCCCCCccceeeEEecCCeeeEEE
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKI-ISMAVHRNLLRLYGFCTTVTEKLLVY 375 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~~E~~~-l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (451)
.++|+..+.||+|+||.||+|+. .+|+.||||+++.........++..|... +..++||||+++++++...+..++||
T Consensus 50 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 129 (340)
T 3an0_A 50 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 129 (340)
T ss_dssp SSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEE
T ss_pred hhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEH
Confidence 45677788999999999999996 56899999999765433334455566655 78889999999999999999999999
Q ss_pred ecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 376 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 376 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
||+++ +|.+++.........+++..+..++.|++.||+|||++. +|+||||||+|||++.++.+||+||
T Consensus 130 e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~--~ivH~Dlkp~NIl~~~~~~~kl~Df 198 (340)
T 3an0_A 130 ELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDF 198 (340)
T ss_dssp CCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHT--CCCCCSCCSTTEEECSTTCEEECCC
T ss_pred HHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeC
Confidence 99985 998888753222235899999999999999999999731 7999999999999999999999998
No 169
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=99.89 E-value=2.7e-23 Score=202.52 Aligned_cols=143 Identities=29% Similarity=0.426 Sum_probs=121.7
Q ss_pred HHHhcCCCCCCccCccCCceEEEEEeCCCCEEEEEEcccccccccHHHHHHHHHHHhc--CCCCCccceeeEEecC----
Q 013004 295 QVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISM--AVHRNLLRLYGFCTTV---- 368 (451)
Q Consensus 295 ~~~~~~f~~~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~--l~H~niv~l~~~~~~~---- 368 (451)
....++|+..+.||+|+||.||+|++. ++.||||++... ....+.+|.+++.. ++||||+++++++...
T Consensus 33 ~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~----~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~ 107 (337)
T 3mdy_A 33 RTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT----EEASWFRETEIYQTVLMRHENILGFIAADIKGTGSW 107 (337)
T ss_dssp TTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG----GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGG
T ss_pred cccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc----ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCC
Confidence 344567999999999999999999985 889999998532 22344555555554 4899999999999876
Q ss_pred CeeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCC-----CCCeeecCCCCCceeeCCCCCcc
Q 013004 369 TEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHC-----DPKIIHRDVKAANILLDEDADQS 443 (451)
Q Consensus 369 ~~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~-----~~~iiHrDlK~~NILld~~~~~~ 443 (451)
...++||||+++|+|.+++... .+++..+..++.|++.||+|||+.+ .++|+||||||+|||++.++.+|
T Consensus 108 ~~~~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~k 182 (337)
T 3mdy_A 108 TQLYLITDYHENGSLYDYLKST-----TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCC 182 (337)
T ss_dssp CEEEEEECCCTTCBHHHHHHHC-----CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEE
T ss_pred CceEEEEeccCCCcHHHHhhcc-----CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEE
Confidence 6789999999999999999764 3899999999999999999999762 45899999999999999999999
Q ss_pred chhh
Q 013004 444 SKTI 447 (451)
Q Consensus 444 i~df 447 (451)
|+||
T Consensus 183 l~Df 186 (337)
T 3mdy_A 183 IADL 186 (337)
T ss_dssp ECCC
T ss_pred EEeC
Confidence 9998
No 170
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=99.89 E-value=2.9e-23 Score=200.04 Aligned_cols=145 Identities=29% Similarity=0.453 Sum_probs=120.7
Q ss_pred HhcCCCCCCccCccCCceEEEEEe-CCCCEEEEEEccccccc----ccHHHHHHHHHHHhcCC---CCCccceeeEEecC
Q 013004 297 ATDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTS----GGELQFQTEVKIISMAV---HRNLLRLYGFCTTV 368 (451)
Q Consensus 297 ~~~~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~----~~~~~~~~E~~~l~~l~---H~niv~l~~~~~~~ 368 (451)
..++|+..+.||+|+||+||+|+. .+++.||||+++..... .....+.+|+.++..++ ||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 467899999999999999999996 56899999998643211 11235677887776664 99999999999875
Q ss_pred C-----eeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCcc
Q 013004 369 T-----EKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQS 443 (451)
Q Consensus 369 ~-----~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~ 443 (451)
. ..++||||+. |+|.+++..... ..+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+|
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~k 160 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAPP--PGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVK 160 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCCT--TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSCEE
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhccC--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEE
Confidence 5 4799999997 599999987543 2389999999999999999999999 999999999999999999999
Q ss_pred chhh
Q 013004 444 SKTI 447 (451)
Q Consensus 444 i~df 447 (451)
|+||
T Consensus 161 l~Df 164 (308)
T 3g33_A 161 LADF 164 (308)
T ss_dssp ECSC
T ss_pred EeeC
Confidence 9998
No 171
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=99.89 E-value=9.2e-24 Score=200.75 Aligned_cols=143 Identities=24% Similarity=0.359 Sum_probs=124.1
Q ss_pred hcCCCCCCccCccCCceEEEEEeCC----CCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeE
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLAD----GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLL 373 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~~----~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 373 (451)
.++|...+.||+|+||.||+|++.+ +..||||.++..........+.+|+.+++.++||||+++++++.+ +..++
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~ 89 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWI 89 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEE
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEE
Confidence 4567788999999999999998632 346999998765433345579999999999999999999999765 45689
Q ss_pred EEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 374 VYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 374 v~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
||||+++|+|.+++..... .+++..+..++.|++.||.|||++ +|+||||||+||+++.++.++++||
T Consensus 90 v~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Df 157 (281)
T 3cc6_A 90 IMELYPYGELGHYLERNKN---SLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDF 157 (281)
T ss_dssp EEECCTTCBHHHHHHHHTT---TCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCC
T ss_pred EEecCCCCCHHHHHHhccc---cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCcc
Confidence 9999999999999976532 388999999999999999999999 9999999999999999999999998
No 172
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=99.89 E-value=1.5e-23 Score=215.69 Aligned_cols=142 Identities=24% Similarity=0.398 Sum_probs=120.9
Q ss_pred cCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccc-cccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEe
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT-SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 376 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 376 (451)
++|+..+.||+|+||+||+|+.. +++.||||+++.... ......+.+|+.+++.++|||||++++++.+....++|||
T Consensus 37 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 116 (494)
T 3lij_A 37 EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVME 116 (494)
T ss_dssp HHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred cCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEe
Confidence 45777899999999999999975 688999999865432 2234578999999999999999999999999999999999
Q ss_pred cCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCC---CCccchhh
Q 013004 377 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDED---ADQSSKTI 447 (451)
Q Consensus 377 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~---~~~~i~df 447 (451)
|+++|+|.+.+.... .+++..+..++.|++.||.|||+. +|+||||||+|||++.+ +.+||+||
T Consensus 117 ~~~~g~L~~~~~~~~----~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Df 183 (494)
T 3lij_A 117 CYKGGELFDEIIHRM----KFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDF 183 (494)
T ss_dssp CCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCC
T ss_pred cCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEEC
Confidence 999999999887653 389999999999999999999999 99999999999999874 45899998
No 173
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=99.89 E-value=1e-23 Score=205.40 Aligned_cols=144 Identities=22% Similarity=0.360 Sum_probs=121.5
Q ss_pred HHhcCCCCCCccCccCCceEEEEEe-CCCCEEEEEEcccccccc-cHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeE
Q 013004 296 VATDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLL 373 (451)
Q Consensus 296 ~~~~~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 373 (451)
...++|...+.||+|+||+||+|+. .+++.||||+++...... ....+.+|+.+++.++||||+++++++.+.+..++
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 110 (329)
T 3gbz_A 31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHL 110 (329)
T ss_dssp -CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEE
T ss_pred cchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEE
Confidence 3456788889999999999999986 468899999996543322 23357899999999999999999999999999999
Q ss_pred EEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeC-----CCCCccchhh
Q 013004 374 VYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLD-----EDADQSSKTI 447 (451)
Q Consensus 374 v~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld-----~~~~~~i~df 447 (451)
||||++ |+|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+|||++ +++.+||+||
T Consensus 111 v~e~~~-~~L~~~~~~~~----~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl~Df 181 (329)
T 3gbz_A 111 IFEYAE-NDLKKYMDKNP----DVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDF 181 (329)
T ss_dssp EEECCS-EEHHHHHHHCT----TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEECCT
T ss_pred EEecCC-CCHHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEECcC
Confidence 999998 59999997653 389999999999999999999999 999999999999995 4455999998
No 174
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=99.89 E-value=2.1e-23 Score=199.86 Aligned_cols=143 Identities=22% Similarity=0.457 Sum_probs=123.5
Q ss_pred cCCCCCCccCccCCceEEEEEeC-CCCEEEEEEccccccc-ccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEe
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS-GGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 376 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 376 (451)
++|+..+.||+|+||.||+|+.. +++.||||+++..... .....+.+|+.+++.++||||+++++++...+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence 56778899999999999999975 6899999998654322 223468899999999999999999999999999999999
Q ss_pred cCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 377 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 377 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|+. |+|.+++..... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.++++||
T Consensus 83 ~~~-~~L~~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~df 147 (299)
T 2r3i_A 83 FLH-QDLKKFMDASAL--TGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADF 147 (299)
T ss_dssp CCS-EEHHHHHHHTTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECST
T ss_pred ccc-CCHHHHHHhhhc--cCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcc
Confidence 998 699999976532 2478999999999999999999999 9999999999999999999999998
No 175
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=99.89 E-value=1.5e-23 Score=207.56 Aligned_cols=140 Identities=24% Similarity=0.362 Sum_probs=116.3
Q ss_pred cCCCCCCccCccCCceEEEEEe-CCCCEEEEEEccccccc-ccHHHHHHHHHHHhcCCCCCccceeeEEecCC------e
Q 013004 299 DGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTS-GGELQFQTEVKIISMAVHRNLLRLYGFCTTVT------E 370 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~------~ 370 (451)
++|...+.||+|+||.||+|.. .+|+.||||++...... .....+.+|+.+++.++||||+++++++.... .
T Consensus 25 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~ 104 (367)
T 1cm8_A 25 AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTD 104 (367)
T ss_dssp SSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCC
T ss_pred ceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCce
Confidence 5677789999999999999997 46899999998543222 22346889999999999999999999997653 4
Q ss_pred eeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 371 KLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 371 ~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
.++||||+ +++|.+++... .+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+||
T Consensus 105 ~~lv~e~~-~~~L~~~~~~~-----~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Df 172 (367)
T 1cm8_A 105 FYLVMPFM-GTDLGKLMKHE-----KLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDF 172 (367)
T ss_dssp CEEEEECC-SEEHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCC
T ss_pred EEEEEecC-CCCHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEee
Confidence 69999999 88999998763 388999999999999999999999 9999999999999999999999998
No 176
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=99.89 E-value=1.1e-23 Score=200.18 Aligned_cols=140 Identities=25% Similarity=0.447 Sum_probs=123.1
Q ss_pred hcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEec---------
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTT--------- 367 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~--------- 367 (451)
..+|+..+.||+|+||.||+|+.. +++.||+|+++... ..+.+|+.++..++||||+++++++..
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 84 (284)
T 2a19_B 10 GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN-----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSS 84 (284)
T ss_dssp HHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS-----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-----
T ss_pred ccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc-----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccc
Confidence 456888899999999999999975 78999999986432 257789999999999999999998854
Q ss_pred -------CCeeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCC
Q 013004 368 -------VTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDA 440 (451)
Q Consensus 368 -------~~~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~ 440 (451)
....++||||+++|+|.+++..... ..+++..+..++.|++.||.|||+. +|+||||||+||++++++
T Consensus 85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~ 159 (284)
T 2a19_B 85 KNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRG--EKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTK 159 (284)
T ss_dssp ----CCEEEEEEEEECCCCSCBHHHHHHHGGG--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETT
T ss_pred ccccccCcceEEEEEeccCCCCHHHHHhhccC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcCCC
Confidence 3457999999999999999976432 2489999999999999999999999 999999999999999999
Q ss_pred Cccchhh
Q 013004 441 DQSSKTI 447 (451)
Q Consensus 441 ~~~i~df 447 (451)
.++++||
T Consensus 160 ~~kl~Df 166 (284)
T 2a19_B 160 QVKIGDF 166 (284)
T ss_dssp EEEECCC
T ss_pred CEEECcc
Confidence 9999998
No 177
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=99.89 E-value=1.1e-23 Score=204.91 Aligned_cols=142 Identities=26% Similarity=0.407 Sum_probs=124.1
Q ss_pred cCCCCCCccCccCCceEEEEEe-----CCCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEe--cCCee
Q 013004 299 DGFSNKNILGRGGFGKVYKGRL-----ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCT--TVTEK 371 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~-----~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~--~~~~~ 371 (451)
++|+..+.||+|+||.||+|++ .+++.||||+++... ......+.+|+.+++.++||||+++++++. .....
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 101 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG-PDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSL 101 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCC-HHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEE
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCC-HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceE
Confidence 4577789999999999999984 357899999986542 223346899999999999999999999886 45568
Q ss_pred eEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 372 LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 372 ~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
++||||+++|+|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.++++||
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Df 171 (327)
T 3lxl_A 102 RLVMEYLPSGCLRDFLQRHRA---RLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADF 171 (327)
T ss_dssp EEEEECCTTCBHHHHHHHHGG---GCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCG
T ss_pred EEEEeecCCCCHHHHHHhccc---CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEccc
Confidence 999999999999999976432 389999999999999999999999 9999999999999999999999998
No 178
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.89 E-value=7e-24 Score=229.57 Aligned_cols=125 Identities=39% Similarity=0.676 Sum_probs=117.7
Q ss_pred ccccCCCCCCEEeCcCCccCccCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeeccccccCCCChhhhhcCCC
Q 013004 89 PELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITS 168 (451)
Q Consensus 89 ~~l~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~ 168 (451)
+.++.+++|+.|||++|+++|.+|.+++++++|+.|+|++|+++|.+|+.++++++|+.|||++|+++|.+|..++.+++
T Consensus 626 ~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~ 705 (768)
T 3rgz_A 626 PTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTM 705 (768)
T ss_dssp CSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCC
T ss_pred hhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCC
Confidence 34445678999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeeccCCccccCcCCCCCCCCcccccccccccccCCCCCCCCCCC
Q 013004 169 LNILDLSNNRLSGPVPDNGSFSQFTPISFENNLNLCGPNTKKPCSG 214 (451)
Q Consensus 169 L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lCg~~~~~~c~~ 214 (451)
|+.||+++|+++|.+|..+++.++...+|.+|+.+||.+.. +|..
T Consensus 706 L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l~-~C~~ 750 (768)
T 3rgz_A 706 LTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLP-RCDP 750 (768)
T ss_dssp CSEEECCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTTSC-CCCS
T ss_pred CCEEECcCCcccccCCCchhhccCCHHHhcCCchhcCCCCc-CCCC
Confidence 99999999999999999999999999999999999998876 7854
No 179
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=99.89 E-value=2.5e-23 Score=204.37 Aligned_cols=142 Identities=28% Similarity=0.465 Sum_probs=122.6
Q ss_pred cCCCCCCccCccCCceEEEEEe-CCCCEEEEEEcccccccc-cHHHHHHHHHHHhcCCCCCccceeeEEec--------C
Q 013004 299 DGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHRNLLRLYGFCTT--------V 368 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~--------~ 368 (451)
++|+..+.||+|+||.||+|+. .+++.||||++....... ....+.+|+.++..++||||+++++++.. .
T Consensus 17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 96 (351)
T 3mi9_A 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK 96 (351)
T ss_dssp GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCC
Confidence 4677889999999999999997 568999999986543322 23468899999999999999999999876 3
Q ss_pred CeeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 369 TEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 369 ~~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+..++||||+++ ++.+.+..... .+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+||
T Consensus 97 ~~~~lv~e~~~~-~l~~~l~~~~~---~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~Df 168 (351)
T 3mi9_A 97 GSIYLVFDFCEH-DLAGLLSNVLV---KFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADF 168 (351)
T ss_dssp CEEEEEEECCSE-EHHHHHHCTTS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCC
T ss_pred ceEEEEEeccCC-CHHHHHhhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEccc
Confidence 468999999985 78777765432 489999999999999999999999 9999999999999999999999998
No 180
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=99.89 E-value=1.5e-23 Score=200.86 Aligned_cols=142 Identities=25% Similarity=0.416 Sum_probs=124.0
Q ss_pred hcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEec---------
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTT--------- 367 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~--------- 367 (451)
.++|+..+.||+|+||.||+|+.. +++.||||+++.. ......+.+|+.+++.++||||+++++++.+
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 82 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT--EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMT 82 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE--HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC---
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc--HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhc
Confidence 456888899999999999999964 6899999998542 2233468999999999999999999998865
Q ss_pred ----CCeeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCcc
Q 013004 368 ----VTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQS 443 (451)
Q Consensus 368 ----~~~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~ 443 (451)
....++||||+++|+|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.++
T Consensus 83 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~~k 156 (303)
T 1zy4_A 83 AVKKKSTLFIQMEYCENGTLYDLIHSEN---LNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVK 156 (303)
T ss_dssp ---CEEEEEEEEECCCSCBHHHHHHHSC---GGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEE
T ss_pred ccccCCceEEEEecCCCCCHHHhhhccc---cccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCCEE
Confidence 346799999999999999998643 2378889999999999999999999 999999999999999999999
Q ss_pred chhh
Q 013004 444 SKTI 447 (451)
Q Consensus 444 i~df 447 (451)
++||
T Consensus 157 l~df 160 (303)
T 1zy4_A 157 IGDF 160 (303)
T ss_dssp ECCC
T ss_pred EeeC
Confidence 9998
No 181
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=99.89 E-value=1.6e-23 Score=221.35 Aligned_cols=135 Identities=26% Similarity=0.374 Sum_probs=119.2
Q ss_pred CccCccCCceEEEEEeC---CCCEEEEEEcccccccc-cHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEecCCC
Q 013004 305 NILGRGGFGKVYKGRLA---DGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTN 380 (451)
Q Consensus 305 ~~lG~G~fg~Vy~~~~~---~~~~vAvK~~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~ 380 (451)
+.||+|+||.||+|.+. +++.||||+++...... ...++.+|+.++..++|||||++++++.. +..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 46999999999999653 46789999997654322 24579999999999999999999999864 568999999999
Q ss_pred CChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 381 GSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 381 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|+|.+++.... .+++.++..++.||+.||+|||++ +|+||||||+|||+++++.+||+||
T Consensus 454 g~L~~~l~~~~----~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DF 513 (635)
T 4fl3_A 454 GPLNKYLQQNR----HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDF 513 (635)
T ss_dssp EEHHHHHHHCT----TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCT
T ss_pred CCHHHHHhhCC----CCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEc
Confidence 99999997653 389999999999999999999999 9999999999999999999999998
No 182
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=99.89 E-value=1.7e-23 Score=214.86 Aligned_cols=143 Identities=24% Similarity=0.420 Sum_probs=126.5
Q ss_pred hcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccc-cccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEE
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT-SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 375 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (451)
.++|...+.||+|+||+||+|+.. +++.||||+++.... ......+.+|+.++..++||||+++++++......++||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 100 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG 100 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEE
Confidence 456888899999999999999975 689999999864332 233457899999999999999999999999999999999
Q ss_pred ecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCC---CCCccchhh
Q 013004 376 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDE---DADQSSKTI 447 (451)
Q Consensus 376 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~---~~~~~i~df 447 (451)
||+++|+|.+.+.... .+++..+..++.|++.||.|||+. +|+||||||+|||++. ++.+||+||
T Consensus 101 e~~~~~~L~~~~~~~~----~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Df 168 (486)
T 3mwu_A 101 ELYTGGELFDEIIKRK----RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDF 168 (486)
T ss_dssp CCCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSC
T ss_pred EcCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEEC
Confidence 9999999999987653 389999999999999999999999 9999999999999964 457999998
No 183
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=99.89 E-value=1.3e-23 Score=205.85 Aligned_cols=140 Identities=22% Similarity=0.294 Sum_probs=123.3
Q ss_pred cCCCCCCccCccCCceEEEEEeCCCCEEEEEEcccccccc-cHHHHHHHHHHHhcCCC--CCccceeeEEecCCeeeEEE
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVH--RNLLRLYGFCTTVTEKLLVY 375 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~-~~~~~~~E~~~l~~l~H--~niv~l~~~~~~~~~~~lv~ 375 (451)
+.|+..+.||+|+||.||+|...+++.||||+++...... ....+.+|+.++..++| +||+++++++......++||
T Consensus 9 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 88 (343)
T 3dbq_A 9 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 88 (343)
T ss_dssp CEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEE
Confidence 4577789999999999999998889999999986543222 23468999999999986 99999999999999999999
Q ss_pred ecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 376 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 376 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
| +.+|+|.+++.... .+++.++..++.|++.||.|||+. +|+||||||+|||++ ++.+||+||
T Consensus 89 e-~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DF 151 (343)
T 3dbq_A 89 E-CGNIDLNSWLKKKK----SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDF 151 (343)
T ss_dssp C-CCSEEHHHHHHHSC----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCC
T ss_pred e-CCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeec
Confidence 9 56889999998753 389999999999999999999999 999999999999997 577999998
No 184
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=99.89 E-value=1.6e-23 Score=205.57 Aligned_cols=145 Identities=28% Similarity=0.427 Sum_probs=120.0
Q ss_pred HHhcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccc----cHHHHHHHHHHHhcCCCCCccceeeEEecCCe
Q 013004 296 VATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSG----GELQFQTEVKIISMAVHRNLLRLYGFCTTVTE 370 (451)
Q Consensus 296 ~~~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~----~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 370 (451)
...++|+..+.||+|+||.||+|+.. +|+.||||+++...... ....+.+|+.++..++||||+++++++...+.
T Consensus 7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (346)
T 1ua2_A 7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN 86 (346)
T ss_dssp ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC
T ss_pred HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc
Confidence 34567899999999999999999974 58999999986533211 12368899999999999999999999999999
Q ss_pred eeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 371 KLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 371 ~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
.++||||+++ +|.+++.... ..+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+||
T Consensus 87 ~~lv~e~~~~-~l~~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Df 156 (346)
T 1ua2_A 87 ISLVFDFMET-DLEVIIKDNS---LVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADF 156 (346)
T ss_dssp CEEEEECCSE-EHHHHHTTCC---SSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCC
T ss_pred eEEEEEcCCC-CHHHHHHhcC---cCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEec
Confidence 9999999986 8888887643 2478889999999999999999999 9999999999999999999999998
No 185
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=99.89 E-value=7e-23 Score=195.74 Aligned_cols=144 Identities=24% Similarity=0.368 Sum_probs=124.2
Q ss_pred cCCCCCCccCccCCceEEEEEe-CCCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEec
Q 013004 299 DGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 377 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey 377 (451)
++|....+||+|+||.||+|+. .+++.||||.++... ......+.+|+.++..++||||+++++++...+..++||||
T Consensus 22 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 100 (295)
T 2clq_A 22 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERD-SRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQ 100 (295)
T ss_dssp CTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCC-C---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCc-hHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEe
Confidence 3455567899999999999996 468899999986543 22345789999999999999999999999999999999999
Q ss_pred CCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCC-CCCccchhh
Q 013004 378 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDE-DADQSSKTI 447 (451)
Q Consensus 378 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~-~~~~~i~df 447 (451)
+++++|.+++..... ...+++..+..++.|++.||.|||+. +|+||||||+||+++. ++.++++||
T Consensus 101 ~~~~~L~~~l~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Df 167 (295)
T 2clq_A 101 VPGGSLSALLRSKWG-PLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDF 167 (295)
T ss_dssp CSEEEHHHHHHHTTC-CCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCT
T ss_pred CCCCCHHHHHHhhcc-CCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeec
Confidence 999999999986532 23467888999999999999999999 9999999999999998 789999998
No 186
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=99.89 E-value=1.7e-23 Score=205.08 Aligned_cols=138 Identities=20% Similarity=0.309 Sum_probs=119.8
Q ss_pred hcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHHHhcC-CCCCccceeeEEecCCeeeEEE
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMA-VHRNLLRLYGFCTTVTEKLLVY 375 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~ 375 (451)
.++|+..+.||+|+||+||+|+.+ +++.||||+++.... ...+|++++..+ +||||+++++++.+.+..++||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~-----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ 95 (342)
T 2qr7_A 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR-----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVT 95 (342)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC-----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC-----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEE
Confidence 466888899999999999999875 688999999865322 235678877776 7999999999999999999999
Q ss_pred ecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCC-C---Cccchhh
Q 013004 376 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDED-A---DQSSKTI 447 (451)
Q Consensus 376 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~-~---~~~i~df 447 (451)
||+++|+|.+++.... .+++.++..++.|++.||+|||++ +|+||||||+|||+.++ + .+|++||
T Consensus 96 E~~~gg~L~~~i~~~~----~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Df 164 (342)
T 2qr7_A 96 ELMKGGELLDKILRQK----FFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDF 164 (342)
T ss_dssp CCCCSCBHHHHHHTCT----TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCC
T ss_pred eCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEEC
Confidence 9999999999997653 389999999999999999999999 99999999999998543 3 4899998
No 187
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=99.89 E-value=2.7e-23 Score=199.89 Aligned_cols=142 Identities=25% Similarity=0.405 Sum_probs=124.2
Q ss_pred hcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEe
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 376 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 376 (451)
.++|...+.||+|+||.||+|+.. +++.||+|.++.... .....+.+|+.++..++||||+++++++...+..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 86 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPA-FRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQ 86 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC-------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccc-cchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEE
Confidence 356778899999999999999975 689999999865332 223468899999999999999999999999999999999
Q ss_pred cCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceee---CCCCCccchhh
Q 013004 377 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILL---DEDADQSSKTI 447 (451)
Q Consensus 377 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILl---d~~~~~~i~df 447 (451)
|+++|+|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+||++ ++++.++++||
T Consensus 87 ~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Df 153 (304)
T 2jam_A 87 LVSGGELFDRILERG----VYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDF 153 (304)
T ss_dssp CCCSCBHHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSC
T ss_pred cCCCccHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccC
Confidence 999999999997653 388999999999999999999999 99999999999999 67889999998
No 188
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=99.89 E-value=1.6e-23 Score=200.01 Aligned_cols=141 Identities=30% Similarity=0.472 Sum_probs=121.3
Q ss_pred hcCCCCCCccCccCCceEEEEEeCCCCEEEEEEcccccccc-cHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEe
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 376 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 376 (451)
.++|+..+.||+|+||.||+|++. ..||||+++...... ....|.+|+.+++.++||||+++++++ .....++|||
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e 99 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQ 99 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEE
T ss_pred ccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEE
Confidence 456888899999999999999864 359999986544322 234689999999999999999999965 4566899999
Q ss_pred cCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 377 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 377 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|+++++|.+++.... ..+++.++..++.|++.||.|||+. +|+||||||+||+++.++.++++||
T Consensus 100 ~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Df 164 (289)
T 3og7_A 100 WCEGSSLYHHLHASE---TKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDF 164 (289)
T ss_dssp CCCEEEHHHHHTTC------CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCC
T ss_pred ecCCCcHHHHHhhcc---CCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccc
Confidence 999999999997543 2489999999999999999999999 9999999999999999999999998
No 189
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=99.89 E-value=4.3e-23 Score=197.06 Aligned_cols=142 Identities=25% Similarity=0.405 Sum_probs=121.2
Q ss_pred CCCCCccCccCCceEEEEEeC-CCCEEEEEEccccccc-ccHHHHHHHHHHHhcCCCCCccceeeEEec----CCeeeEE
Q 013004 301 FSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS-GGELQFQTEVKIISMAVHRNLLRLYGFCTT----VTEKLLV 374 (451)
Q Consensus 301 f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~----~~~~~lv 374 (451)
|...+.||+|+||.||+|... ++..||+|.++..... .....+.+|+.+++.++||||+++++++.. ....++|
T Consensus 28 ~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv 107 (290)
T 1t4h_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV 107 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEE
T ss_pred EEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEE
Confidence 455678999999999999874 5789999998654322 233468999999999999999999998865 3558999
Q ss_pred EecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeC-CCCCccchhh
Q 013004 375 YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLD-EDADQSSKTI 447 (451)
Q Consensus 375 ~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld-~~~~~~i~df 447 (451)
|||+++|+|.+++.... .+++..+..++.|++.||.|||+. .++|+||||||+||+++ +++.++++||
T Consensus 108 ~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~-~~~i~H~dikp~Nil~~~~~~~~kl~Df 176 (290)
T 1t4h_A 108 TELMTSGTLKTYLKRFK----VMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDL 176 (290)
T ss_dssp EECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCSCCCGGGEEESSTTSCEEECCT
T ss_pred EEecCCCCHHHHHHHcc----CCCHHHHHHHHHHHHHHHHHHHcC-CCCEEECCCCHHHEEEECCCCCEEEeeC
Confidence 99999999999998753 388999999999999999999998 12299999999999998 7889999998
No 190
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=99.89 E-value=5.8e-23 Score=200.70 Aligned_cols=140 Identities=28% Similarity=0.416 Sum_probs=124.0
Q ss_pred HHHhcCCCCCCccCccCCceEEEEEeCCCCEEEEEEcccccccccHHHHHHHHHHHhc--CCCCCccceeeEEecCC---
Q 013004 295 QVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISM--AVHRNLLRLYGFCTTVT--- 369 (451)
Q Consensus 295 ~~~~~~f~~~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~--l~H~niv~l~~~~~~~~--- 369 (451)
....++|...+.||+|+||.||+|+. +++.||||+++.. ....+.+|++++.. ++||||+++++++....
T Consensus 38 ~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~----~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~ 112 (342)
T 1b6c_B 38 RTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR----EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTW 112 (342)
T ss_dssp HHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG----GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSC
T ss_pred ccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch----hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCcc
Confidence 44567899999999999999999998 5899999998543 23467788888876 78999999999998775
Q ss_pred -eeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHh--------cCCCCCeeecCCCCCceeeCCCC
Q 013004 370 -EKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLH--------EHCDPKIIHRDVKAANILLDEDA 440 (451)
Q Consensus 370 -~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH--------~~~~~~iiHrDlK~~NILld~~~ 440 (451)
..++||||+++|+|.+++... .+++.++..++.|++.||.||| +. +|+||||||+|||++.++
T Consensus 113 ~~~~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NIll~~~~ 184 (342)
T 1b6c_B 113 TQLWLVSDYHEHGSLFDYLNRY-----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNG 184 (342)
T ss_dssp CCEEEEECCCTTCBHHHHHHHC-----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGEEECTTS
T ss_pred ceeEEEEeecCCCcHHHHHhcc-----CccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHEEECCCC
Confidence 789999999999999999764 3899999999999999999999 66 999999999999999999
Q ss_pred Cccchhh
Q 013004 441 DQSSKTI 447 (451)
Q Consensus 441 ~~~i~df 447 (451)
.+|++||
T Consensus 185 ~~kL~Df 191 (342)
T 1b6c_B 185 TCCIADL 191 (342)
T ss_dssp CEEECCC
T ss_pred CEEEEEC
Confidence 9999998
No 191
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=99.89 E-value=2.4e-23 Score=202.04 Aligned_cols=143 Identities=24% Similarity=0.355 Sum_probs=120.6
Q ss_pred HhcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccc-------cccHHHHHHHHHHHhcCCCCCccceeeEEecC
Q 013004 297 ATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT-------SGGELQFQTEVKIISMAVHRNLLRLYGFCTTV 368 (451)
Q Consensus 297 ~~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~-------~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~ 368 (451)
..++|...+.||+|+||.||+|+.. +++.||||.++.... ......+.+|+.++..++||||+++++++...
T Consensus 8 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 87 (322)
T 2ycf_A 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE 87 (322)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS
T ss_pred hhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC
Confidence 3456888899999999999999874 578999999864321 11123588999999999999999999998765
Q ss_pred CeeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCC---ccch
Q 013004 369 TEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDAD---QSSK 445 (451)
Q Consensus 369 ~~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~---~~i~ 445 (451)
. .++||||+++|+|.+++.... .+++.....++.|++.||.|||++ +|+||||||+|||++.++. +|++
T Consensus 88 ~-~~lv~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~ 159 (322)
T 2ycf_A 88 D-YYIVLELMEGGELFDKVVGNK----RLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKIT 159 (322)
T ss_dssp S-EEEEEECCTTEETHHHHSTTC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSCCEEEC
T ss_pred c-eEEEEecCCCCcHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCCeEEEc
Confidence 4 899999999999999987543 489999999999999999999999 9999999999999998664 8999
Q ss_pred hh
Q 013004 446 TI 447 (451)
Q Consensus 446 df 447 (451)
||
T Consensus 160 Df 161 (322)
T 2ycf_A 160 DF 161 (322)
T ss_dssp CC
T ss_pred cC
Confidence 98
No 192
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=99.89 E-value=1.9e-23 Score=199.64 Aligned_cols=142 Identities=25% Similarity=0.352 Sum_probs=120.9
Q ss_pred hcCCCCCC-ccCccCCceEEEEEe---CCCCEEEEEEcccccccc-cHHHHHHHHHHHhcCCCCCccceeeEEecCCeee
Q 013004 298 TDGFSNKN-ILGRGGFGKVYKGRL---ADGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKL 372 (451)
Q Consensus 298 ~~~f~~~~-~lG~G~fg~Vy~~~~---~~~~~vAvK~~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 372 (451)
.++|...+ .||+|+||.||+|.+ .+++.||||+++...... ...++.+|+.++..++||||+++++++ ..+..+
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~ 93 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWM 93 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEE
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcE
Confidence 34565556 899999999999964 246789999997543322 244799999999999999999999998 566789
Q ss_pred EEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 373 LVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 373 lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+||||+++|+|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+||+++.++.++++||
T Consensus 94 lv~e~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Df 161 (291)
T 1xbb_A 94 LVMEMAELGPLNKYLQQNR----HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDF 161 (291)
T ss_dssp EEEECCTTEEHHHHHHHCT----TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCC
T ss_pred EEEEeCCCCCHHHHHHhCc----CCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEccC
Confidence 9999999999999998753 389999999999999999999999 9999999999999999999999998
No 193
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=99.89 E-value=2.3e-23 Score=202.57 Aligned_cols=142 Identities=25% Similarity=0.454 Sum_probs=123.4
Q ss_pred cCCCCCCccCccCCceEEEEEe-----CCCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCC--ee
Q 013004 299 DGFSNKNILGRGGFGKVYKGRL-----ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVT--EK 371 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~-----~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~--~~ 371 (451)
++|+..+.||+|+||.||+|++ .+++.||||+++... ......+.+|+.+++.++||||+++++++...+ ..
T Consensus 41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 119 (326)
T 2w1i_A 41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST-EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 119 (326)
T ss_dssp GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCC-SHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CC
T ss_pred HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCC-HHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCce
Confidence 4567788999999999999984 358899999986532 223457899999999999999999999987644 68
Q ss_pred eEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 372 LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 372 ~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
++||||+++|+|.+++..... .+++.++..++.|++.||.|||+. +|+||||||+||+++.++.++++||
T Consensus 120 ~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Df 189 (326)
T 2w1i_A 120 KLIMEYLPYGSLRDYLQKHKE---RIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDF 189 (326)
T ss_dssp EEEECCCTTCBHHHHHHHSTT---SSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCC
T ss_pred EEEEECCCCCCHHHHHHhccc---CCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecC
Confidence 999999999999999987532 489999999999999999999999 9999999999999999999999998
No 194
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=99.89 E-value=1.6e-23 Score=201.97 Aligned_cols=142 Identities=30% Similarity=0.484 Sum_probs=121.0
Q ss_pred cCCCCCCccCccCCceEEEEEeCCCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEEecC
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYM 378 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~ 378 (451)
++|+..+.||+|+||.||+|++. ++.||||.++.. .....|.+|+.+++.++||||+++++++.+ ..++||||+
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~~ 81 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE---SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYA 81 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST---THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEECC
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh---hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEcC
Confidence 45677789999999999999985 788999998542 234578999999999999999999998763 479999999
Q ss_pred CCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCC-ccchhh
Q 013004 379 TNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDAD-QSSKTI 447 (451)
Q Consensus 379 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~-~~i~df 447 (451)
++|+|.+++..... ...+++..+..++.|+++||+|||+.+..+|+||||||+||+++.++. +|++||
T Consensus 82 ~~~~L~~~l~~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Df 150 (307)
T 2eva_A 82 EGGSLYNVLHGAEP-LPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDF 150 (307)
T ss_dssp TTCBHHHHHHCSSS-EECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCC
T ss_pred CCCCHHHHHhccCC-CCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccc
Confidence 99999999986532 234788999999999999999999932238999999999999998886 799998
No 195
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=99.89 E-value=1.9e-23 Score=212.96 Aligned_cols=140 Identities=23% Similarity=0.305 Sum_probs=120.1
Q ss_pred hcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEccccccc-ccHHHHHHHHHHHhcCCCCCccceeeEEecC------C
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS-GGELQFQTEVKIISMAVHRNLLRLYGFCTTV------T 369 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~------~ 369 (451)
.++|+..+.||+|+||+||+|+.. +++.||||++...... ....++.+|+.+++.++|||||++++++... .
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 467888899999999999999864 6889999998654222 2234688999999999999999999999654 3
Q ss_pred eeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 370 EKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 370 ~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
..++||||+++ ++.+.+.. .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+||
T Consensus 141 ~~~lv~E~~~~-~l~~~~~~------~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DF 208 (464)
T 3ttj_A 141 DVYLVMELMDA-NLCQVIQM------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDF 208 (464)
T ss_dssp EEEEEEECCSE-EHHHHHTS------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC
T ss_pred eEEEEEeCCCC-CHHHHHhh------cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEE
Confidence 57999999986 46666643 278999999999999999999999 9999999999999999999999998
No 196
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=99.89 E-value=4.6e-24 Score=211.88 Aligned_cols=146 Identities=16% Similarity=0.189 Sum_probs=118.0
Q ss_pred hcCCCCCCccCccCCceEEEEEe-CCCCEEEEEEcccccc--cccHHHHHHHH---HHHhcCCCCCcccee-------eE
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERT--SGGELQFQTEV---KIISMAVHRNLLRLY-------GF 364 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~--~~~~~~~~~E~---~~l~~l~H~niv~l~-------~~ 364 (451)
.++|...+.||+|+||+||+|+. .+|+.||||+++.... ......+.+|+ ..++.++|||||+++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 35677789999999999999996 5689999999864322 22345788999 555666899999998 66
Q ss_pred EecCC-----------------eeeEEEecCCCCChhHHhhccCCC---CCCCCHHHHHHHHHHHHHHHHhHhcCCCCCe
Q 013004 365 CTTVT-----------------EKLLVYPYMTNGSVASRLRERQSS---LPPLDWPTRKKIALGSARGLSYLHEHCDPKI 424 (451)
Q Consensus 365 ~~~~~-----------------~~~lv~ey~~~gsL~~~l~~~~~~---~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~i 424 (451)
+...+ ..++||||+ +|+|.+++...... ...++|..+..++.|++.||+|||++ +|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence 65543 278999999 68999999864211 11244688889999999999999999 99
Q ss_pred eecCCCCCceeeCCCCCccchhh
Q 013004 425 IHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 425 iHrDlK~~NILld~~~~~~i~df 447 (451)
+||||||+|||++.++.+||+||
T Consensus 228 vHrDikp~NIll~~~~~~kL~DF 250 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGF 250 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCG
T ss_pred ecCCCCHHHEEEcCCCCEEEEec
Confidence 99999999999999999999998
No 197
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=99.89 E-value=1.6e-23 Score=208.44 Aligned_cols=144 Identities=21% Similarity=0.306 Sum_probs=118.2
Q ss_pred HHHhcCCCCCCccCccCCceEEEEEe-CCCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecC-----
Q 013004 295 QVATDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTV----- 368 (451)
Q Consensus 295 ~~~~~~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~----- 368 (451)
....++|+..+.||+|+||+||+|+. .+|+.||||++..... ...+|+.+++.++|||||++++++...
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~-----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 77 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR-----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEP 77 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT-----SCCHHHHHHTTCCCTTBCCEEEEEEEC-----
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc-----hHHHHHHHHHHcCCCCccchhheeeecCcccc
Confidence 34567788899999999999999986 5789999999854321 234799999999999999999998543
Q ss_pred ---------------------------------CeeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHh
Q 013004 369 ---------------------------------TEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSY 415 (451)
Q Consensus 369 ---------------------------------~~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~y 415 (451)
...++||||++ |+|.+.+.........+++..+..++.|++.||.|
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~ 156 (383)
T 3eb0_A 78 KPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGF 156 (383)
T ss_dssp --------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Confidence 33789999998 58887776532223358999999999999999999
Q ss_pred HhcCCCCCeeecCCCCCceeeC-CCCCccchhh
Q 013004 416 LHEHCDPKIIHRDVKAANILLD-EDADQSSKTI 447 (451)
Q Consensus 416 LH~~~~~~iiHrDlK~~NILld-~~~~~~i~df 447 (451)
||+. +|+||||||+|||++ .++.+||+||
T Consensus 157 LH~~---gi~H~Dikp~Nil~~~~~~~~kl~Df 186 (383)
T 3eb0_A 157 IHSL---GICHRDIKPQNLLVNSKDNTLKLCDF 186 (383)
T ss_dssp HHTT---TEECSCCCGGGEEEETTTTEEEECCC
T ss_pred HHHC---cCccCccCHHHEEEcCCCCcEEEEEC
Confidence 9999 999999999999998 5789999998
No 198
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=99.89 E-value=3e-23 Score=198.69 Aligned_cols=143 Identities=29% Similarity=0.325 Sum_probs=126.3
Q ss_pred hcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccc--------cccHHHHHHHHHHHhcCC-CCCccceeeEEec
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--------SGGELQFQTEVKIISMAV-HRNLLRLYGFCTT 367 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~--------~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~ 367 (451)
.++|+..+.||+|+||.||+|+.. +++.||||.++.... ......+.+|+.++..+. ||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 95 (298)
T 1phk_A 16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET 95 (298)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc
Confidence 467888899999999999999975 688999999864321 011235789999999996 9999999999999
Q ss_pred CCeeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 368 VTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 368 ~~~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
....++||||+++|+|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+||+++.++.++++||
T Consensus 96 ~~~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~df 168 (298)
T 1phk_A 96 NTFFFLVFDLMKKGELFDYLTEKV----TLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDF 168 (298)
T ss_dssp SSEEEEEEECCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCC
T ss_pred CCeEEEEEeccCCCcHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCcEEEecc
Confidence 999999999999999999998653 389999999999999999999999 9999999999999999999999998
No 199
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=99.89 E-value=2.2e-23 Score=198.80 Aligned_cols=147 Identities=22% Similarity=0.267 Sum_probs=121.2
Q ss_pred hcCCCCCCccCccCCceEEEEEe-CCCCEEEEEEcccccccccHH-HHHHHHHHHhcCCCCCccceeeEEecCCeeeEEE
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGEL-QFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 375 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~-~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (451)
.++|+..+.||+|+||.||+|+. .+++.||||+++......... .+.++...++.++||||+++++++.+.+..++||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 85 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 85 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence 45688889999999999999997 468999999997543332222 3455555688899999999999999999999999
Q ss_pred ecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 376 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 376 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
||++ |+|.+++.........+++..+..++.|++.||.|||+++ +|+||||||+||+++.++.+|++||
T Consensus 86 e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~Df 154 (290)
T 3fme_A 86 ELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDF 154 (290)
T ss_dssp ECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHS--CCCCCCCSGGGCEECTTCCEEBCCC
T ss_pred ehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeec
Confidence 9997 5888877653222345899999999999999999999842 7999999999999999999999998
No 200
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=99.89 E-value=2.4e-23 Score=208.31 Aligned_cols=138 Identities=23% Similarity=0.316 Sum_probs=116.6
Q ss_pred cCCCCC-CccCccCCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHHH-hcCCCCCccceeeEEec----CCee
Q 013004 299 DGFSNK-NILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKII-SMAVHRNLLRLYGFCTT----VTEK 371 (451)
Q Consensus 299 ~~f~~~-~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l-~~l~H~niv~l~~~~~~----~~~~ 371 (451)
++|... ++||+|+||+||+|+.. +++.||||+++.. ..+.+|+.++ ...+||||+++++++.. ....
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~ 134 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC------PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 134 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc------hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEE
Confidence 345444 68999999999999874 6899999998531 3567888876 45689999999998865 5568
Q ss_pred eEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCC---CCCccchhh
Q 013004 372 LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDE---DADQSSKTI 447 (451)
Q Consensus 372 ~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~---~~~~~i~df 447 (451)
++||||+++|+|.+++..... ..+++.++..++.|++.||.|||+. +|+||||||+|||++. ++.+||+||
T Consensus 135 ~lv~E~~~gg~L~~~l~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~DF 208 (400)
T 1nxk_A 135 LIVMECLDGGELFSRIQDRGD--QAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDF 208 (400)
T ss_dssp EEEEECCCSEEHHHHHHCC-----CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECCC
T ss_pred EEEEEeCCCCcHHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEec
Confidence 999999999999999986532 2489999999999999999999999 9999999999999998 788999998
No 201
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=99.89 E-value=5.4e-23 Score=198.55 Aligned_cols=142 Identities=30% Similarity=0.464 Sum_probs=121.9
Q ss_pred HhcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEE
Q 013004 297 ATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 375 (451)
Q Consensus 297 ~~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (451)
..++|+..+.||+|+||.||+|... +|+.||||.++... ....+.+|+.++..++||||+++++++...+..++||
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 103 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES---DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVM 103 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS---CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH---HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEe
Confidence 4567888899999999999999875 58999999986532 2346899999999999999999999999999999999
Q ss_pred ecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 376 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 376 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
||+++|+|.+++..... .+++..+..++.|++.||.|||+. +|+||||||+||+++.++.++++||
T Consensus 104 e~~~~~~L~~~~~~~~~---~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~df 169 (314)
T 3com_A 104 EYCGAGSVSDIIRLRNK---TLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADF 169 (314)
T ss_dssp ECCTTEEHHHHHHHHTC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCC
T ss_pred ecCCCCCHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeec
Confidence 99999999999974332 489999999999999999999999 9999999999999999999999998
No 202
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=99.89 E-value=7e-23 Score=196.82 Aligned_cols=144 Identities=23% Similarity=0.345 Sum_probs=122.0
Q ss_pred hcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccc---cccHHHHHHHHHHHhcCCCCCccceeeEEe--cCCee
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT---SGGELQFQTEVKIISMAVHRNLLRLYGFCT--TVTEK 371 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~--~~~~~ 371 (451)
.++|...+.||+|+||.||+|... +++.||+|+++.... ......+.+|+.++..++||||+++++++. +....
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 467899999999999999999974 688999999865432 223457899999999999999999999984 45578
Q ss_pred eEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 372 LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 372 ~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
++||||+++| +.+.+..... ..+++..+..++.|++.||.|||++ +|+||||||+||+++.++.++++||
T Consensus 84 ~lv~e~~~~~-l~~~~~~~~~--~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~df 153 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSVPE--KRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISAL 153 (305)
T ss_dssp EEEEECCSEE-HHHHHHHSTT--CSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCC
T ss_pred EEEehhccCC-HHHHHHhCcc--cccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeecc
Confidence 9999999977 7777765432 3489999999999999999999999 9999999999999999999999998
No 203
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=99.89 E-value=3.1e-23 Score=203.62 Aligned_cols=141 Identities=22% Similarity=0.377 Sum_probs=123.6
Q ss_pred hcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecC-----Cee
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTV-----TEK 371 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-----~~~ 371 (451)
.++|+..+.||+|+||.||+|+.. +|+.||||+++..........+.+|+.+++.++||||+++++++... ...
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 356888899999999999999975 68899999996543333344688999999999999999999987654 678
Q ss_pred eEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 372 LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 372 ~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
++||||+. |+|.+++... .+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+|++||
T Consensus 90 ~lv~e~~~-~~L~~~~~~~-----~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Df 156 (353)
T 2b9h_A 90 YIIQELMQ-TDLHRVISTQ-----MLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDF 156 (353)
T ss_dssp EEEECCCS-EEHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCC
T ss_pred EEEEeccC-ccHHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEec
Confidence 99999997 6999988763 389999999999999999999999 9999999999999999999999998
No 204
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=99.89 E-value=1.7e-23 Score=206.72 Aligned_cols=143 Identities=16% Similarity=0.223 Sum_probs=118.0
Q ss_pred hcCCCCCCccCccCCceEEEEEeCC------CCEEEEEEcccccccc----------cHHHHHHHHHHHhcCCCCCccce
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLAD------GKLVAVKRLKEERTSG----------GELQFQTEVKIISMAVHRNLLRL 361 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~~------~~~vAvK~~~~~~~~~----------~~~~~~~E~~~l~~l~H~niv~l 361 (451)
.++|...+.||+|+||.||+|++.+ ++.||||++....... ....+..|+..+..++||||+++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 4568888999999999999998754 4789999985432110 01124456667788899999999
Q ss_pred eeEEecC----CeeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeC
Q 013004 362 YGFCTTV----TEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLD 437 (451)
Q Consensus 362 ~~~~~~~----~~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld 437 (451)
++++... ...++||||+ +|+|.+++.... ..+++.++..++.|++.||+|||+. +|+||||||+|||++
T Consensus 114 ~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~---~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nill~ 186 (364)
T 3op5_A 114 WGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANA---KRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLLN 186 (364)
T ss_dssp EEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTT---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEE
T ss_pred EeeeeeccCCcceEEEEEeCC-CCCHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEEEe
Confidence 9998764 4479999999 999999998753 2489999999999999999999999 999999999999999
Q ss_pred --CCCCccchhh
Q 013004 438 --EDADQSSKTI 447 (451)
Q Consensus 438 --~~~~~~i~df 447 (451)
.++.+||+||
T Consensus 187 ~~~~~~~kl~DF 198 (364)
T 3op5_A 187 YKNPDQVYLVDY 198 (364)
T ss_dssp SSCTTCEEECCC
T ss_pred cCCCCeEEEEEC
Confidence 7889999998
No 205
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=99.89 E-value=3.1e-23 Score=206.93 Aligned_cols=140 Identities=22% Similarity=0.288 Sum_probs=122.9
Q ss_pred cCCCCCCccCccCCceEEEEEeCCCCEEEEEEccccccc-ccHHHHHHHHHHHhcCC--CCCccceeeEEecCCeeeEEE
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTS-GGELQFQTEVKIISMAV--HRNLLRLYGFCTTVTEKLLVY 375 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~-~~~~~~~~E~~~l~~l~--H~niv~l~~~~~~~~~~~lv~ 375 (451)
++|+..+.||+|+||+||+|...+++.||||+++..... .....+.+|+.++..++ ||||+++++++...+..++||
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 458888999999999999999888999999998654322 22347899999999986 599999999999999999999
Q ss_pred ecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 376 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 376 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
| +.+|+|.+++.... .+++.++..++.|++.||.|||+. +|+||||||+|||++ ++.+||+||
T Consensus 136 E-~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DF 198 (390)
T 2zmd_A 136 E-CGNIDLNSWLKKKK----SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDF 198 (390)
T ss_dssp E-CCSEEHHHHHHHCS----SCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCC
T ss_pred e-cCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEec
Confidence 9 56889999998753 378999999999999999999999 999999999999996 578999998
No 206
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=99.88 E-value=4.1e-23 Score=204.04 Aligned_cols=141 Identities=21% Similarity=0.310 Sum_probs=123.5
Q ss_pred hcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecC-----Cee
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTV-----TEK 371 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-----~~~ 371 (451)
.++|+..+.||+|+||.||+|+.. +++.||||++...........+.+|+.++..++||||+++++++... ...
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 105 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV 105 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence 356888899999999999999864 68899999987543333345789999999999999999999999764 368
Q ss_pred eEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 372 LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 372 ~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
++|+||+. |+|.+++... .+++.++..++.|++.||.|||+. +|+||||||+|||++.++.+||+||
T Consensus 106 ~iv~e~~~-~~L~~~l~~~-----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Df 172 (364)
T 3qyz_A 106 YIVQDLME-TDLYKLLKTQ-----HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDF 172 (364)
T ss_dssp EEEEECCS-EEHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCC
T ss_pred EEEEcccC-cCHHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeC
Confidence 99999997 5999998764 389999999999999999999999 9999999999999999999999998
No 207
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=99.88 E-value=1.7e-23 Score=198.58 Aligned_cols=141 Identities=28% Similarity=0.449 Sum_probs=122.3
Q ss_pred hcCCCCCCccCccCCceEEEEEeCCCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecC-CeeeEEEe
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTV-TEKLLVYP 376 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-~~~~lv~e 376 (451)
.++|+..+.||+|+||.||+|+.. ++.||||.++... ....+.+|+.++..++||||+++++++.+. +..++|||
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~---~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e 95 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA---TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE 95 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC-----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEEC
T ss_pred hhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh---HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEe
Confidence 456778899999999999999884 8899999986432 345789999999999999999999997654 46899999
Q ss_pred cCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 377 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 377 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|+++|+|.+++..... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.++++||
T Consensus 96 ~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Df 161 (278)
T 1byg_A 96 YMAKGSLVDYLRSRGR--SVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDF 161 (278)
T ss_dssp CCTTEEHHHHHHHHHH--HHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCC
T ss_pred cCCCCCHHHHHHhccc--ccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeec
Confidence 9999999999976421 1268899999999999999999999 9999999999999999999999998
No 208
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=99.88 E-value=1.1e-22 Score=194.80 Aligned_cols=140 Identities=18% Similarity=0.230 Sum_probs=123.5
Q ss_pred hcCCCCCCccCccCCceEEEEEe-CCCCEEEEEEcccccccccHHHHHHHHHHHhcC-CCCCccceeeEEecCCeeeEEE
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMA-VHRNLLRLYGFCTTVTEKLLVY 375 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~ 375 (451)
.++|+..+.||+|+||.||+|+. .+++.||||+++... ....+.+|+..+..+ +|+|++++++++......++||
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~ 85 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS---DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVI 85 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT---TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC---ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEE
Confidence 35688889999999999999996 568999999885432 223578899999998 7999999999999999999999
Q ss_pred ecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCC-----ccchhh
Q 013004 376 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDAD-----QSSKTI 447 (451)
Q Consensus 376 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~-----~~i~df 447 (451)
||+ +++|.+++..... .+++.++..++.|++.||+|||++ +|+||||||+|||++.++. ++++||
T Consensus 86 e~~-~~~L~~~l~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Df 155 (298)
T 1csn_A 86 DLL-GPSLEDLLDLCGR---KFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDF 155 (298)
T ss_dssp ECC-CCBHHHHHHHTTT---CCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCC
T ss_pred Eec-CCCHHHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEEC
Confidence 999 9999999986532 489999999999999999999999 9999999999999988776 999998
No 209
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=99.88 E-value=1.6e-23 Score=203.28 Aligned_cols=147 Identities=31% Similarity=0.487 Sum_probs=127.6
Q ss_pred HHHHhcCCCCCCccCccCCceEEEEEe-CCCCEEEEEEcccccccccHHHHHHHHHHHhcC-CCCCccceeeEEec----
Q 013004 294 LQVATDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMA-VHRNLLRLYGFCTT---- 367 (451)
Q Consensus 294 ~~~~~~~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~---- 367 (451)
+....++|+..+.||+|+||.||+|+. .+++.||||++.... .....+.+|+.++..+ +||||+++++++..
T Consensus 19 l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~ 96 (326)
T 2x7f_A 19 LRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG--DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPP 96 (326)
T ss_dssp CCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS--STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--
T ss_pred ccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc--ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCc
Confidence 334567788889999999999999997 468999999986432 2345788999999988 79999999999876
Q ss_pred --CCeeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccch
Q 013004 368 --VTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSK 445 (451)
Q Consensus 368 --~~~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~ 445 (451)
....++||||+++|+|.+++..... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.++++
T Consensus 97 ~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~kl~ 171 (326)
T 2x7f_A 97 GMDDQLWLVMEFCGAGSVTDLIKNTKG--NTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLV 171 (326)
T ss_dssp CCCCEEEEEEECCTTEEHHHHHHHSGG--GCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEEC
T ss_pred cccceEEEEEEcCCCCcHHHHHHhccc--CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCCEEEe
Confidence 4678999999999999999986432 2488999999999999999999999 99999999999999999999999
Q ss_pred hh
Q 013004 446 TI 447 (451)
Q Consensus 446 df 447 (451)
||
T Consensus 172 Df 173 (326)
T 2x7f_A 172 DF 173 (326)
T ss_dssp CC
T ss_pred eC
Confidence 98
No 210
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=99.88 E-value=9.2e-23 Score=194.50 Aligned_cols=145 Identities=23% Similarity=0.398 Sum_probs=127.7
Q ss_pred HHhcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccc-cccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeE
Q 013004 296 VATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT-SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLL 373 (451)
Q Consensus 296 ~~~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 373 (451)
...++|+..+.||+|+||.||+|+.. +++.||+|+++.... ......+.+|+.+++.++||||+++++++...+..++
T Consensus 19 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 98 (287)
T 2wei_A 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYI 98 (287)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred HHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEE
Confidence 34567888999999999999999975 689999999865433 2334578999999999999999999999999999999
Q ss_pred EEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCC---Cccchhh
Q 013004 374 VYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDA---DQSSKTI 447 (451)
Q Consensus 374 v~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~---~~~i~df 447 (451)
|+||+++++|.+.+.... .+++.++..++.|++.||.|||+. +|+||||||+||+++.++ .+|++||
T Consensus 99 v~e~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~Df 168 (287)
T 2wei_A 99 VGELYTGGELFDEIIKRK----RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDF 168 (287)
T ss_dssp EECCCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECST
T ss_pred EEEccCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEecc
Confidence 999999999999987653 389999999999999999999999 999999999999998653 6899998
No 211
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=99.88 E-value=5.5e-23 Score=200.08 Aligned_cols=148 Identities=22% Similarity=0.290 Sum_probs=126.7
Q ss_pred HHHhcCCCCC-CccCccCCceEEEEEeC-CCCEEEEEEcccccccc-cHHHHHHHHHHHhcCC-CCCccceeeEEecCCe
Q 013004 295 QVATDGFSNK-NILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSG-GELQFQTEVKIISMAV-HRNLLRLYGFCTTVTE 370 (451)
Q Consensus 295 ~~~~~~f~~~-~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~-~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~ 370 (451)
....+.|... +.||+|+||.||+|+.. +++.||||+++...... ....+.+|+.++..+. ||||+++++++...+.
T Consensus 24 ~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~ 103 (327)
T 3lm5_A 24 ENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSE 103 (327)
T ss_dssp HHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE
T ss_pred HhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCe
Confidence 3344556555 78999999999999875 58999999987544322 3457899999999885 6999999999999999
Q ss_pred eeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCC---CCCccchhh
Q 013004 371 KLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDE---DADQSSKTI 447 (451)
Q Consensus 371 ~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~---~~~~~i~df 447 (451)
.++||||+++|+|.+++..... ..+++.++..++.|++.||+|||+. +|+||||||+|||++. ++.+|++||
T Consensus 104 ~~lv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~~~~kL~Df 178 (327)
T 3lm5_A 104 IILILEYAAGGEIFSLCLPELA--EMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIKIVDF 178 (327)
T ss_dssp EEEEEECCTTEEGGGGGSSCC---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTBCCEEECCG
T ss_pred EEEEEEecCCCcHHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCCCcEEEeeC
Confidence 9999999999999999865422 3489999999999999999999999 9999999999999998 789999998
No 212
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=99.88 E-value=3.9e-23 Score=201.50 Aligned_cols=140 Identities=34% Similarity=0.527 Sum_probs=115.9
Q ss_pred hcCCCCCCccCccCCceEEEEEeCCCCEEEEEEcccccccccHHHHHHHHHH--HhcCCCCCccceeeEEec-----CCe
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKI--ISMAVHRNLLRLYGFCTT-----VTE 370 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~--l~~l~H~niv~l~~~~~~-----~~~ 370 (451)
.++|+..+.||+|+||.||+|+. +++.||||+++... ...+..|.++ +..++||||+++++++.. ...
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~----~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 86 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN----RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRME 86 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEE
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc----hhhHHHHHHHHHHHhccCcchhhheecccccccCCCce
Confidence 46788889999999999999987 68899999985432 2234444444 456899999999986543 235
Q ss_pred eeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCC------CCCeeecCCCCCceeeCCCCCccc
Q 013004 371 KLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHC------DPKIIHRDVKAANILLDEDADQSS 444 (451)
Q Consensus 371 ~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~------~~~iiHrDlK~~NILld~~~~~~i 444 (451)
.++||||+++|+|.+++.... .+|..+..++.|++.||.|||+.+ .++|+||||||+|||++.++.+||
T Consensus 87 ~~lv~e~~~~g~L~~~l~~~~-----~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL 161 (336)
T 3g2f_A 87 YLLVMEYYPNGSLXKYLSLHT-----SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVI 161 (336)
T ss_dssp EEEEECCCTTCBHHHHHHHCC-----BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEE
T ss_pred EEEEEecCCCCcHHHHHhhcc-----cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEE
Confidence 689999999999999997653 589999999999999999999863 348999999999999999999999
Q ss_pred hhh
Q 013004 445 KTI 447 (451)
Q Consensus 445 ~df 447 (451)
+||
T Consensus 162 ~DF 164 (336)
T 3g2f_A 162 SDF 164 (336)
T ss_dssp CCC
T ss_pred eec
Confidence 998
No 213
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=99.88 E-value=8e-23 Score=196.25 Aligned_cols=138 Identities=23% Similarity=0.315 Sum_probs=119.2
Q ss_pred cCCCCC-CccCccCCceEEEEEe-CCCCEEEEEEcccccccccHHHHHHHHHHH-hcCCCCCccceeeEEec----CCee
Q 013004 299 DGFSNK-NILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKII-SMAVHRNLLRLYGFCTT----VTEK 371 (451)
Q Consensus 299 ~~f~~~-~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l-~~l~H~niv~l~~~~~~----~~~~ 371 (451)
++|... +.||+|+||.||+|+. .+++.||+|+++. ...+.+|+.++ ...+||||+++++++.. ....
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~------~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 90 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD------CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 90 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc------cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceE
Confidence 445555 7799999999999987 4689999999853 13567888877 66789999999999876 6678
Q ss_pred eEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCC---CCCccchhh
Q 013004 372 LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDE---DADQSSKTI 447 (451)
Q Consensus 372 ~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~---~~~~~i~df 447 (451)
++||||+++|+|.+++..... ..+++..+..++.|++.||.|||+. +|+||||||+||+++. ++.++++||
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~Df 164 (299)
T 3m2w_A 91 LIVMECLDGGELFSRIQDRGD--QAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDF 164 (299)
T ss_dssp EEEECCCCSCBHHHHHHHCTT--CCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCC
T ss_pred EEEEeecCCCcHHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEecc
Confidence 999999999999999987542 2489999999999999999999999 9999999999999998 778999998
No 214
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=99.88 E-value=4.6e-23 Score=203.92 Aligned_cols=141 Identities=25% Similarity=0.364 Sum_probs=113.9
Q ss_pred hcCCCCCCccCccCCceEEEEEe-CCCCEEEEEEccccccc-ccHHHHHHHHHHHhcCCCCCccceeeEEecC------C
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTS-GGELQFQTEVKIISMAVHRNLLRLYGFCTTV------T 369 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~------~ 369 (451)
.++|+..+.||+|+||.||+|.. .+|+.||||++...... .....+.+|+.+++.++||||+++++++... .
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 36788889999999999999986 46899999998653222 2234688999999999999999999998754 5
Q ss_pred eeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 370 EKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 370 ~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
..++|+||+ +++|.+++... .+++..+..++.|+++||.|||+. +|+||||||+|||++.++.+||+||
T Consensus 108 ~~~lv~e~~-~~~L~~~~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DF 176 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVKCQ-----KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDF 176 (367)
T ss_dssp CCEEEEECC-CEECC-----C-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC-
T ss_pred eEEEEeccc-CCCHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeec
Confidence 679999999 68998888652 389999999999999999999999 9999999999999999999999998
No 215
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=99.88 E-value=5.4e-23 Score=218.12 Aligned_cols=145 Identities=23% Similarity=0.329 Sum_probs=125.2
Q ss_pred HHhcCCCCCCccCccCCceEEEEEeCC----CCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCee
Q 013004 296 VATDGFSNKNILGRGGFGKVYKGRLAD----GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEK 371 (451)
Q Consensus 296 ~~~~~f~~~~~lG~G~fg~Vy~~~~~~----~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 371 (451)
...++|+..+.||+|+||.||+|.+.. +..||||.++..........|.+|+.+++.++||||+++++++. .+..
T Consensus 387 i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~ 465 (656)
T 2j0j_A 387 IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPV 465 (656)
T ss_dssp CCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSC
T ss_pred cccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCce
Confidence 334567778899999999999998742 45799999865443333457999999999999999999999985 4568
Q ss_pred eEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 372 LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 372 ~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
++||||+++|+|.+++..... .+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+||
T Consensus 466 ~lv~E~~~~g~L~~~l~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~DF 535 (656)
T 2j0j_A 466 WIIMELCTLGELRSFLQVRKF---SLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDF 535 (656)
T ss_dssp EEEEECCTTCBHHHHHHHTTT---TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCC
T ss_pred EEEEEcCCCCcHHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEec
Confidence 999999999999999986532 489999999999999999999999 9999999999999999999999998
No 216
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=99.88 E-value=8.8e-23 Score=198.46 Aligned_cols=135 Identities=23% Similarity=0.324 Sum_probs=120.7
Q ss_pred cCCCCCCccCccCCceEEEEEe-CCCCEEEEEEcccccccccHHHHHHHHHHHhcCC-CCCccceeeEEec--CCeeeEE
Q 013004 299 DGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAV-HRNLLRLYGFCTT--VTEKLLV 374 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~--~~~~~lv 374 (451)
++|+..+.||+|+||.||+|+. .+++.||||+++.. ....+.+|+.++..++ ||||+++++++.. ....++|
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv 111 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV----KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALV 111 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC----CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc----chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEE
Confidence 5677889999999999999986 56899999998642 2357899999999997 9999999999987 5678999
Q ss_pred EecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCC-Cccchhh
Q 013004 375 YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDA-DQSSKTI 447 (451)
Q Consensus 375 ~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~-~~~i~df 447 (451)
|||+++++|.+++.. +++.++..++.|++.||+|||+. +|+||||||+|||++.++ .+||+||
T Consensus 112 ~e~~~~~~l~~~~~~-------~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Df 175 (330)
T 3nsz_A 112 FEHVNNTDFKQLYQT-------LTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDW 175 (330)
T ss_dssp EECCCCCCHHHHGGG-------CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCC
T ss_pred EeccCchhHHHHHHh-------CCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeC
Confidence 999999999998853 78899999999999999999999 999999999999999877 8999998
No 217
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=99.88 E-value=8.6e-23 Score=202.26 Aligned_cols=140 Identities=22% Similarity=0.298 Sum_probs=121.3
Q ss_pred hcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEccccccc-ccHHHHHHHHHHHhcCCCCCccceeeEEecCC------
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS-GGELQFQTEVKIISMAVHRNLLRLYGFCTTVT------ 369 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~------ 369 (451)
.++|+..+.||+|+||.||+|+.. +++.||||+++..... .....+.+|+.+++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 356888899999999999999864 6889999998653322 22346889999999999999999999997654
Q ss_pred eeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 370 EKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 370 ~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
..++||||+++ +|.+.+.. .+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+||
T Consensus 104 ~~~lv~e~~~~-~l~~~~~~------~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Df 171 (371)
T 2xrw_A 104 DVYIVMELMDA-NLCQVIQM------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDF 171 (371)
T ss_dssp EEEEEEECCSE-EHHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCC
T ss_pred ceEEEEEcCCC-CHHHHHhh------ccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEe
Confidence 68999999974 78888753 278999999999999999999999 9999999999999999999999998
No 218
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.88 E-value=3.1e-23 Score=221.49 Aligned_cols=139 Identities=21% Similarity=0.350 Sum_probs=119.4
Q ss_pred cCCCCCCccCccCCceEEEEEeC--CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCe-----e
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA--DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTE-----K 371 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~-----~ 371 (451)
++|...+.||+|+||.||+|++. +++.||||++...........+.+|+.++..++|||||++++++...+. .
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~ 159 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG 159 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence 56888899999999999999975 5889999998654333334468999999999999999999999987655 6
Q ss_pred eEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 372 LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 372 ~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
|+||||+++++|.+++.. .++|.++..++.|++.||.|||++ +|+||||||+|||++.+ .+||+||
T Consensus 160 ~lv~E~~~g~~L~~~~~~------~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DF 225 (681)
T 2pzi_A 160 YIVMEYVGGQSLKRSKGQ------KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDL 225 (681)
T ss_dssp EEEEECCCCEECC----C------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCC
T ss_pred EEEEEeCCCCcHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEec
Confidence 999999999999887654 389999999999999999999999 99999999999999986 8999998
No 219
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=99.88 E-value=6.4e-23 Score=195.64 Aligned_cols=142 Identities=35% Similarity=0.451 Sum_probs=115.3
Q ss_pred cCCCCCCccCccCCceEEEEEeC--CCC--EEEEEEccccccc--ccHHHHHHHHHHHhcCCCCCccceeeEEecCCeee
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA--DGK--LVAVKRLKEERTS--GGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKL 372 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~--~~~--~vAvK~~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 372 (451)
++|+..+.||+|+||.||+|++. +++ .||||+++..... .....+.+|+.++..++||||+++++++.... .+
T Consensus 18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~ 96 (291)
T 1u46_A 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MK 96 (291)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CE
T ss_pred hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ce
Confidence 46777899999999999999853 333 6899998654322 23347899999999999999999999988754 89
Q ss_pred EEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 373 LVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 373 lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+|+||+++|+|.+++..... .+++..+..++.|++.||.|||++ +|+||||||+||+++.++.++++||
T Consensus 97 ~v~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Df 165 (291)
T 1u46_A 97 MVTELAPLGSLLDRLRKHQG---HFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDF 165 (291)
T ss_dssp EEEECCTTCBHHHHHHHHGG---GSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCC
T ss_pred eeEecccCCCHHHHHHhccC---CcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEccc
Confidence 99999999999999986532 388999999999999999999999 9999999999999999999999998
No 220
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=99.88 E-value=1.1e-22 Score=196.38 Aligned_cols=139 Identities=26% Similarity=0.391 Sum_probs=114.6
Q ss_pred cCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEe-----------
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCT----------- 366 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~----------- 366 (451)
++|...+.||+|+||.||+|+.. +++.||||++.... ......+.+|+.+++.++||||+++++++.
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 89 (320)
T 2i6l_A 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTD-PQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG 89 (320)
T ss_dssp TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCS-HHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCC-hHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence 56778899999999999999975 48999999986432 223347899999999999999999999874
Q ss_pred ---cCCeeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeC-CCCCc
Q 013004 367 ---TVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLD-EDADQ 442 (451)
Q Consensus 367 ---~~~~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld-~~~~~ 442 (451)
+....++||||++ |+|.+++... .+++..+..++.|++.||+|||++ +|+||||||+||+++ +++.+
T Consensus 90 ~~~~~~~~~lv~e~~~-~~L~~~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~ 160 (320)
T 2i6l_A 90 SLTELNSVYIVQEYME-TDLANVLEQG-----PLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDLVL 160 (320)
T ss_dssp -CCSCSEEEEEEECCS-EEHHHHHTTC-----CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTTEE
T ss_pred cccccCceeEEeeccC-CCHHHHhhcC-----CccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCeE
Confidence 3467899999998 6999998642 378999999999999999999999 999999999999998 45689
Q ss_pred cchhh
Q 013004 443 SSKTI 447 (451)
Q Consensus 443 ~i~df 447 (451)
|++||
T Consensus 161 kl~Df 165 (320)
T 2i6l_A 161 KIGDF 165 (320)
T ss_dssp EECCC
T ss_pred EEccC
Confidence 99998
No 221
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=99.88 E-value=1e-22 Score=197.58 Aligned_cols=145 Identities=29% Similarity=0.503 Sum_probs=121.9
Q ss_pred HhcCCCCCCccCccCCceEEEEEe--CCCCEEEEEEcccccccc-cHHHHHHHHHHHhcC---CCCCccceeeEEe----
Q 013004 297 ATDGFSNKNILGRGGFGKVYKGRL--ADGKLVAVKRLKEERTSG-GELQFQTEVKIISMA---VHRNLLRLYGFCT---- 366 (451)
Q Consensus 297 ~~~~f~~~~~lG~G~fg~Vy~~~~--~~~~~vAvK~~~~~~~~~-~~~~~~~E~~~l~~l---~H~niv~l~~~~~---- 366 (451)
..++|+..+.||+|+||.||+|+. .+++.||||+++...... ....+.+|+.++..+ +||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 346788889999999999999997 357899999986543222 123567777776655 8999999999987
Q ss_pred -cCCeeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccch
Q 013004 367 -TVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSK 445 (451)
Q Consensus 367 -~~~~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~ 445 (451)
.....++||||+. |+|.+++..... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.++++
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~kl~ 162 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKVPE--PGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLA 162 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHSCT--TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEEC
T ss_pred CCCceEEEEEecCC-CCHHHHHHhccc--CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEEEe
Confidence 4567899999998 699999987543 2489999999999999999999999 99999999999999999999999
Q ss_pred hh
Q 013004 446 TI 447 (451)
Q Consensus 446 df 447 (451)
||
T Consensus 163 Df 164 (326)
T 1blx_A 163 DF 164 (326)
T ss_dssp SC
T ss_pred cC
Confidence 98
No 222
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=99.87 E-value=5.8e-23 Score=198.67 Aligned_cols=144 Identities=24% Similarity=0.457 Sum_probs=123.7
Q ss_pred HHHhcCCCCCCccCccCCceEEEEEeCCCCEEEEEEccccccc-ccHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeE
Q 013004 295 QVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTS-GGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLL 373 (451)
Q Consensus 295 ~~~~~~f~~~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 373 (451)
....++|+..+.||+|+||.||+|+..+ .||+|.++..... .....+.+|+.++..++||||+++++++...+..++
T Consensus 29 ~i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~i 106 (319)
T 2y4i_B 29 DIPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAI 106 (319)
T ss_dssp SSCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEE
T ss_pred cCCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEE
Confidence 3445678889999999999999999754 4999998654322 223457889999999999999999999999999999
Q ss_pred EEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 374 VYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 374 v~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
||||+++++|.+++.... ..+++.++..++.|++.||+|||+. +|+||||||+||+++ ++.++++||
T Consensus 107 v~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Df 173 (319)
T 2y4i_B 107 ITSLCKGRTLYSVVRDAK---IVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDF 173 (319)
T ss_dssp ECBCCCSEEHHHHTTSSC---CCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCC
T ss_pred EeecccCCcHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeec
Confidence 999999999999997643 2488999999999999999999999 999999999999998 678999998
No 223
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=99.87 E-value=1.5e-22 Score=200.57 Aligned_cols=139 Identities=22% Similarity=0.367 Sum_probs=121.1
Q ss_pred cCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccc-cHHHHHHHHHHHhcCCCCCccceeeEEecCCee-----
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHRNLLRLYGFCTTVTEK----- 371 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~----- 371 (451)
++|...+.||+|+||.||+|+.. +|+.||||+++...... ....+.+|+.+++.++||||+++++++...+..
T Consensus 42 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 121 (371)
T 4exu_A 42 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 121 (371)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCC
T ss_pred ccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCccccee
Confidence 56777889999999999999864 68999999986543222 234688999999999999999999999876654
Q ss_pred -eEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 372 -LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 372 -~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
++||||+. |+|.+.+.. .+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+||
T Consensus 122 ~~lv~e~~~-~~l~~~~~~------~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Df 188 (371)
T 4exu_A 122 FYLVMPFMQ-TDLQKIMGM------EFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDF 188 (371)
T ss_dssp CEEEEECCC-EEHHHHTTS------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECST
T ss_pred EEEEEcccc-ccHHHHhhc------CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEec
Confidence 99999998 688877743 289999999999999999999999 9999999999999999999999998
No 224
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=99.87 E-value=5.3e-23 Score=201.69 Aligned_cols=141 Identities=18% Similarity=0.193 Sum_probs=115.3
Q ss_pred cCCCCCCccCccCCceEEEEEeC----CCCEEEEEEcccccccc----------cHHHHHHHHHHHhcCCCCCccceeeE
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA----DGKLVAVKRLKEERTSG----------GELQFQTEVKIISMAVHRNLLRLYGF 364 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~----~~~~vAvK~~~~~~~~~----------~~~~~~~E~~~l~~l~H~niv~l~~~ 364 (451)
++|...+.||+|+||.||+|+.. ++..||||.+....... ....+.+|+..+..++||||++++++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 45777899999999999999975 56789999986432110 11246788889999999999999999
Q ss_pred Eec----CCeeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCC
Q 013004 365 CTT----VTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDA 440 (451)
Q Consensus 365 ~~~----~~~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~ 440 (451)
+.. ....++||||+ +++|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+|||++.++
T Consensus 117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~ 188 (345)
T 2v62_A 117 GLTEFKGRSYRFMVMERL-GIDLQKISGQNG----TFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYKN 188 (345)
T ss_dssp EEEESSSCEEEEEEEECE-EEEHHHHCBGGG----BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEESSS
T ss_pred cccccCCCcEEEEEEecc-CCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEccCC
Confidence 987 67889999999 999999997654 489999999999999999999999 999999999999999887
Q ss_pred --Cccchhh
Q 013004 441 --DQSSKTI 447 (451)
Q Consensus 441 --~~~i~df 447 (451)
.+||+||
T Consensus 189 ~~~~kL~Df 197 (345)
T 2v62_A 189 PDQVYLADY 197 (345)
T ss_dssp TTSEEECCC
T ss_pred CCcEEEEeC
Confidence 9999998
No 225
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=99.87 E-value=2.6e-22 Score=197.50 Aligned_cols=149 Identities=21% Similarity=0.289 Sum_probs=111.5
Q ss_pred HHHHHhcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCe-
Q 013004 293 ELQVATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTE- 370 (451)
Q Consensus 293 ~~~~~~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~- 370 (451)
+.....++|+..+.||+|+||.||+|+.. +++.||||++..... ....+.+|+..+..++||||+++++++.....
T Consensus 17 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~ 94 (360)
T 3e3p_A 17 RSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPR--FRNRELQIMQDLAVLHHPNIVQLQSYFYTLGER 94 (360)
T ss_dssp HHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTT--CCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred hchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCcc--ccHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence 44566789999999999999999999974 689999998854322 22356778888888999999999999865433
Q ss_pred ------eeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHh--cCCCCCeeecCCCCCceeeCC-CCC
Q 013004 371 ------KLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLH--EHCDPKIIHRDVKAANILLDE-DAD 441 (451)
Q Consensus 371 ------~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH--~~~~~~iiHrDlK~~NILld~-~~~ 441 (451)
.++||||+++ ++...+.........+++..+..++.|++.||.||| +. +|+||||||+|||++. ++.
T Consensus 95 ~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~~~~ 170 (360)
T 3e3p_A 95 DRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEADGT 170 (360)
T ss_dssp CTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETTTTE
T ss_pred cccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCCCCc
Confidence 7899999986 555554432222335889999999999999999999 76 9999999999999997 889
Q ss_pred ccchhh
Q 013004 442 QSSKTI 447 (451)
Q Consensus 442 ~~i~df 447 (451)
+||+||
T Consensus 171 ~kl~Df 176 (360)
T 3e3p_A 171 LKLCDF 176 (360)
T ss_dssp EEECCC
T ss_pred EEEeeC
Confidence 999998
No 226
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=99.87 E-value=1.8e-22 Score=198.36 Aligned_cols=139 Identities=22% Similarity=0.362 Sum_probs=120.3
Q ss_pred cCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccc-cHHHHHHHHHHHhcCCCCCccceeeEEecCCe------
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHRNLLRLYGFCTTVTE------ 370 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~------ 370 (451)
++|...+.||+|+||.||+|+.. +|+.||||++....... ....+.+|+.+++.++||||+++++++.....
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 103 (353)
T 3coi_A 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 103 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccccee
Confidence 56777889999999999999874 68999999986543222 23468899999999999999999999987654
Q ss_pred eeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 371 KLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 371 ~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
.++||||+. |+|.+++.. .+++..+..++.|++.||.|||++ +|+||||||+||+++.++.+|++||
T Consensus 104 ~~lv~e~~~-~~l~~~~~~------~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Df 170 (353)
T 3coi_A 104 FYLVMPFMQ-TDLQKIMGL------KFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDF 170 (353)
T ss_dssp CEEEEECCS-EEGGGTTTS------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECST
T ss_pred EEEEecccc-CCHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeec
Confidence 499999997 688877643 288999999999999999999999 9999999999999999999999998
No 227
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=99.87 E-value=7.7e-23 Score=202.56 Aligned_cols=141 Identities=11% Similarity=0.020 Sum_probs=104.4
Q ss_pred cCCCCCCccCccCCceEEEEEeC-CCCEEEEEEccccccc--ccHHHHHHHH---HHHhcCCCCCcccee-------eEE
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS--GGELQFQTEV---KIISMAVHRNLLRLY-------GFC 365 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~--~~~~~~~~E~---~~l~~l~H~niv~l~-------~~~ 365 (451)
.+|...+.||+|+||.||+|+.. +++.||||+++..... .....+.+|+ ..+.. +||||++++ +++
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehhe
Confidence 34777899999999999999965 6899999999764421 2233577774 45555 799987754 444
Q ss_pred ecC-----------------CeeeEEEecCCCCChhHHhhccCCCCCCCCHHHH------HHHHHHHHHHHHhHhcCCCC
Q 013004 366 TTV-----------------TEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTR------KKIALGSARGLSYLHEHCDP 422 (451)
Q Consensus 366 ~~~-----------------~~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~------~~i~~~ia~~L~yLH~~~~~ 422 (451)
... ...++||||++ |+|.+++..... .+.+..+ ..++.|++.||+|||++
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~---~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~--- 213 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDF---VYVFRGDEGILALHILTAQLIRLAANLQSK--- 213 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHH---SCCCCHHHHHHHHHHHHHHHHHHHHHHHHT---
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhcc---ccchhhhhhhhhHHHHHHHHHHHHHHHHHC---
Confidence 332 33799999999 899999986422 2345555 67889999999999999
Q ss_pred CeeecCCCCCceeeCCCCCccchhh
Q 013004 423 KIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 423 ~iiHrDlK~~NILld~~~~~~i~df 447 (451)
+|+||||||+|||++.++.+||+||
T Consensus 214 ~ivHrDikp~NIll~~~~~~kL~DF 238 (371)
T 3q60_A 214 GLVHGHFTPDNLFIMPDGRLMLGDV 238 (371)
T ss_dssp TEEETTCSGGGEEECTTSCEEECCG
T ss_pred CCccCcCCHHHEEECCCCCEEEEec
Confidence 9999999999999999999999998
No 228
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=99.87 E-value=1.2e-22 Score=204.51 Aligned_cols=139 Identities=29% Similarity=0.441 Sum_probs=113.5
Q ss_pred CCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecC----C--eee
Q 013004 300 GFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTV----T--EKL 372 (451)
Q Consensus 300 ~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~----~--~~~ 372 (451)
+|+..+.||+|+||.||+|+.. +++.||||++.... ..+.+|+.+++.++|||||++++++... + ..+
T Consensus 55 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~-----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~ 129 (420)
T 1j1b_A 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK-----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 129 (420)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT-----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred eEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc-----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence 4667789999999999999975 58999999985432 1235799999999999999999988542 2 367
Q ss_pred EEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCC-CCccchhh
Q 013004 373 LVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDED-ADQSSKTI 447 (451)
Q Consensus 373 lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~-~~~~i~df 447 (451)
+||||+++ ++.+.+.........+++..+..++.|+++||.|||++ +|+||||||+|||++.+ +.+||+||
T Consensus 130 lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DF 201 (420)
T 1j1b_A 130 LVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDF 201 (420)
T ss_dssp EEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCC
T ss_pred eehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccc
Confidence 89999986 66666553222223589999999999999999999999 99999999999999976 56799998
No 229
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=99.87 E-value=1.5e-22 Score=196.93 Aligned_cols=145 Identities=26% Similarity=0.383 Sum_probs=120.6
Q ss_pred cCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHHHhcCC-CCCccceeeEEe--------cC
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAV-HRNLLRLYGFCT--------TV 368 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~--------~~ 368 (451)
.+|...+.||+|+||.||+|+.. +++.||||++.... ......+.+|+.++..+. ||||+++++++. ..
T Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~ 106 (337)
T 3ll6_A 28 LRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNE-EEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQ 106 (337)
T ss_dssp EEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESS-HHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSS
T ss_pred ceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCc-hHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCC
Confidence 46777899999999999999964 68999999985432 223346889999999996 999999999984 23
Q ss_pred CeeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 369 TEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 369 ~~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
...++++||+. |+|.+++..... ...+++.++..++.|++.||.|||+. +++|+||||||+|||++.++.+||+||
T Consensus 107 ~~~~lv~e~~~-g~L~~~l~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~-~~~ivH~Dikp~NIl~~~~~~~kl~Df 182 (337)
T 3ll6_A 107 AEFLLLTELCK-GQLVEFLKKMES-RGPLSCDTVLKIFYQTCRAVQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDF 182 (337)
T ss_dssp EEEEEEEECCS-EEHHHHHHHHHT-TCSCCHHHHHHHHHHHHHHHHHHHTS-SSCCBCCCCCGGGCEECTTSCEEBCCC
T ss_pred ceEEEEEEecC-CCHHHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHhC-CCCEEEccCCcccEEECCCCCEEEecC
Confidence 44799999996 799998875322 12489999999999999999999998 122999999999999999999999998
No 230
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=99.87 E-value=5.8e-23 Score=201.93 Aligned_cols=137 Identities=20% Similarity=0.250 Sum_probs=118.7
Q ss_pred cCCCCCCccCccCCceEEEEEeCC---------CCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccc---------
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLAD---------GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLR--------- 360 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~~---------~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~--------- 360 (451)
++|...+.||+|+||.||+|+... ++.||||.++.. ..+.+|+.++..++||||++
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~------~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 115 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD------GRLFNEQNFFQRAAKPLQVNKWKKLYSTP 115 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT------STHHHHHHHHHHHCCHHHHHHHHHHTTCT
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc------chHHHHHHHHHHhcccchhhhhhhhccCC
Confidence 567888999999999999998753 789999998543 25789999999999999998
Q ss_pred ------eeeEEec-CCeeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCc
Q 013004 361 ------LYGFCTT-VTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAAN 433 (451)
Q Consensus 361 ------l~~~~~~-~~~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~N 433 (451)
+++++.. ....++||||+ +|+|.+++..... ..+++.++..++.|++.||.|||++ +|+||||||+|
T Consensus 116 ~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~--~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~N 189 (352)
T 2jii_A 116 LLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPK--HVLSERSVLQVACRLLDALEFLHEN---EYVHGNVTAEN 189 (352)
T ss_dssp TCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGG--GCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCGGG
T ss_pred ccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCc--CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHH
Confidence 5677765 67889999999 9999999986521 2489999999999999999999999 99999999999
Q ss_pred eeeCCCC--Cccchhh
Q 013004 434 ILLDEDA--DQSSKTI 447 (451)
Q Consensus 434 ILld~~~--~~~i~df 447 (451)
||++.++ .++|+||
T Consensus 190 Il~~~~~~~~~kl~Df 205 (352)
T 2jii_A 190 IFVDPEDQSQVTLAGY 205 (352)
T ss_dssp EEEETTEEEEEEECCG
T ss_pred EEEcCCCCceEEEecC
Confidence 9999998 8999998
No 231
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=99.87 E-value=2.9e-22 Score=200.76 Aligned_cols=140 Identities=24% Similarity=0.357 Sum_probs=110.8
Q ss_pred CCC-CCccCccCCceEEEEEeC---CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEec--CCeeeEE
Q 013004 301 FSN-KNILGRGGFGKVYKGRLA---DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTT--VTEKLLV 374 (451)
Q Consensus 301 f~~-~~~lG~G~fg~Vy~~~~~---~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~--~~~~~lv 374 (451)
|.. .++||+|+||+||+|+.+ +++.||||+++... ....+.+|+.++..++|||||++++++.. ....++|
T Consensus 22 y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv 98 (405)
T 3rgf_A 22 FEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG---ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLL 98 (405)
T ss_dssp EECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS---CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEE
T ss_pred hhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC---CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEE
Confidence 443 468999999999999965 47889999996432 22368899999999999999999999954 6789999
Q ss_pred EecCCCCChhHHhhccC-----CCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceee----CCCCCccch
Q 013004 375 YPYMTNGSVASRLRERQ-----SSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILL----DEDADQSSK 445 (451)
Q Consensus 375 ~ey~~~gsL~~~l~~~~-----~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILl----d~~~~~~i~ 445 (451)
|||+. |+|.+++.... .....+++..+..++.|++.||.|||+. +|+||||||+|||+ +.++.+||+
T Consensus 99 ~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~ 174 (405)
T 3rgf_A 99 FDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIA 174 (405)
T ss_dssp EECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTTCEEEC
T ss_pred EeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCCcEEEE
Confidence 99997 58888776321 1122489999999999999999999999 99999999999999 677899999
Q ss_pred hh
Q 013004 446 TI 447 (451)
Q Consensus 446 df 447 (451)
||
T Consensus 175 Df 176 (405)
T 3rgf_A 175 DM 176 (405)
T ss_dssp CT
T ss_pred EC
Confidence 98
No 232
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=99.87 E-value=3.4e-22 Score=201.79 Aligned_cols=142 Identities=21% Similarity=0.310 Sum_probs=121.3
Q ss_pred hcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHHHhcC------CCCCccceeeEEecCCe
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMA------VHRNLLRLYGFCTTVTE 370 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l------~H~niv~l~~~~~~~~~ 370 (451)
..+|+..+.||+|+||.||+|+.. +++.||||+++... .....+.+|+.++..+ +|+||+++++++.....
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~ 173 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK--RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNH 173 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH--HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTE
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc--chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCe
Confidence 346788899999999999999865 58899999986532 2233567787777655 67899999999999999
Q ss_pred eeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCC--ccchhh
Q 013004 371 KLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDAD--QSSKTI 447 (451)
Q Consensus 371 ~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~--~~i~df 447 (451)
.++||||+. |+|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++. +||+||
T Consensus 174 ~~lv~e~~~-~~L~~~l~~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL~DF 246 (429)
T 3kvw_A 174 ICMTFELLS-MNLYELIKKNKF--QGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDF 246 (429)
T ss_dssp EEEEECCCC-CBHHHHHHHTTT--CCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEECCC
T ss_pred EEEEEeccC-CCHHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEEeec
Confidence 999999996 699999887543 2489999999999999999999999 9999999999999999987 899998
No 233
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=99.87 E-value=6.3e-23 Score=197.98 Aligned_cols=146 Identities=23% Similarity=0.367 Sum_probs=117.5
Q ss_pred HHHhcCCCCCCccCccCCceEEEEEe-CCCCEEEEEEcccccccc-----cHHHHHHHHHHHhcC----CCCCccceeeE
Q 013004 295 QVATDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSG-----GELQFQTEVKIISMA----VHRNLLRLYGF 364 (451)
Q Consensus 295 ~~~~~~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~~-----~~~~~~~E~~~l~~l----~H~niv~l~~~ 364 (451)
....++|...+.||+|+||.||+|+. .+++.||||+++...... ....+.+|+.++..+ +|+||++++++
T Consensus 27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~ 106 (312)
T 2iwi_A 27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDW 106 (312)
T ss_dssp ------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEE
T ss_pred hhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEE
Confidence 34456788899999999999999986 468899999996543211 122466788888887 89999999999
Q ss_pred EecCCeeeEEEec-CCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeC-CCCCc
Q 013004 365 CTTVTEKLLVYPY-MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLD-EDADQ 442 (451)
Q Consensus 365 ~~~~~~~~lv~ey-~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld-~~~~~ 442 (451)
+...+..++|+|| +.+++|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+||+++ +++.+
T Consensus 107 ~~~~~~~~~v~e~~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~ 179 (312)
T 2iwi_A 107 FETQEGFMLVLERPLPAQDLFDYITEKG----PLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRRGCA 179 (312)
T ss_dssp C-----CEEEEECCSSEEEHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEETTTTEE
T ss_pred EecCCeEEEEEEecCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeCCCCeE
Confidence 9998999999999 78999999998753 389999999999999999999999 999999999999999 78899
Q ss_pred cchhh
Q 013004 443 SSKTI 447 (451)
Q Consensus 443 ~i~df 447 (451)
+++||
T Consensus 180 kl~df 184 (312)
T 2iwi_A 180 KLIDF 184 (312)
T ss_dssp EECCC
T ss_pred EEEEc
Confidence 99998
No 234
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.86 E-value=2.2e-22 Score=209.83 Aligned_cols=131 Identities=15% Similarity=0.145 Sum_probs=103.5
Q ss_pred cCccCCceEEEEE-eCCCCEEEEEEcccccc---------cccHHHHHHHHHHHhcC-CCCCccceeeEEecCCeeeEEE
Q 013004 307 LGRGGFGKVYKGR-LADGKLVAVKRLKEERT---------SGGELQFQTEVKIISMA-VHRNLLRLYGFCTTVTEKLLVY 375 (451)
Q Consensus 307 lG~G~fg~Vy~~~-~~~~~~vAvK~~~~~~~---------~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~ 375 (451)
.+.|++|.+..++ +-.|+.+|||.+..... .....+|.+|+++|+++ .|+||+++++++.+....||||
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM 321 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM 321 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence 4556666665543 33588899999865421 11223699999999999 6999999999999999999999
Q ss_pred ecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 376 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 376 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
||++||+|.+.+.... +++. .+|+.||+.||+|+|++ +||||||||+|||+++++.+||+||
T Consensus 322 Eyv~G~~L~d~i~~~~----~l~~---~~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DF 383 (569)
T 4azs_A 322 EKLPGRLLSDMLAAGE----EIDR---EKILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDF 383 (569)
T ss_dssp ECCCSEEHHHHHHTTC----CCCH---HHHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCC
T ss_pred ecCCCCcHHHHHHhCC----CCCH---HHHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeec
Confidence 9999999999998653 2554 35899999999999999 9999999999999999999999999
No 235
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=99.86 E-value=1.8e-22 Score=201.62 Aligned_cols=140 Identities=24% Similarity=0.382 Sum_probs=113.7
Q ss_pred cCCCCCCccCccCCceEEEEEeCCCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCe------ee
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTE------KL 372 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~------~~ 372 (451)
.+|...+.||+|+||.||+|+..++..||+|++..... ...+|+.+++.++||||+++++++..... .+
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~-----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~ 114 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR-----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLN 114 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT-----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc-----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEE
Confidence 35777899999999999999987777799998754321 23479999999999999999999865332 78
Q ss_pred EEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeC-CCCCccchhh
Q 013004 373 LVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLD-EDADQSSKTI 447 (451)
Q Consensus 373 lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld-~~~~~~i~df 447 (451)
+||||++++. .+.+.........+++..+..++.|++.||+|||+. +|+||||||+|||++ .++.+||+||
T Consensus 115 lv~e~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DF 186 (394)
T 4e7w_A 115 LVLEYVPETV-YRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDF 186 (394)
T ss_dssp EEEECCSEEH-HHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCC
T ss_pred EEeeccCccH-HHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeC
Confidence 9999998754 333332111123489999999999999999999999 999999999999999 7899999998
No 236
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=99.86 E-value=1.7e-22 Score=195.91 Aligned_cols=144 Identities=22% Similarity=0.358 Sum_probs=124.7
Q ss_pred HhcCCCCCCccCccCCceEEEEEe-CCCCEEEEEEcccccccc-----cHHHHHHHHHHHhcCC--CCCccceeeEEecC
Q 013004 297 ATDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSG-----GELQFQTEVKIISMAV--HRNLLRLYGFCTTV 368 (451)
Q Consensus 297 ~~~~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~~-----~~~~~~~E~~~l~~l~--H~niv~l~~~~~~~ 368 (451)
..++|+..+.||+|+||.||+|+. .+++.||||.++...... ....+.+|+.++..++ |+||+++++++...
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~ 120 (320)
T 3a99_A 41 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP 120 (320)
T ss_dssp CTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECS
T ss_pred ccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecC
Confidence 346688889999999999999986 468899999986543221 1235778999999886 59999999999999
Q ss_pred CeeeEEEecCCC-CChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeC-CCCCccchh
Q 013004 369 TEKLLVYPYMTN-GSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLD-EDADQSSKT 446 (451)
Q Consensus 369 ~~~~lv~ey~~~-gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld-~~~~~~i~d 446 (451)
+..++|+||+.+ ++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++ +++.+||+|
T Consensus 121 ~~~~lv~e~~~~~~~L~~~l~~~~----~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~kL~D 193 (320)
T 3a99_A 121 DSFVLILERPEPVQDLFDFITERG----ALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLID 193 (320)
T ss_dssp SEEEEEEECCSSEEEHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECC
T ss_pred CcEEEEEEcCCCCccHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCCCCEEEee
Confidence 999999999986 89999998753 388999999999999999999999 999999999999999 678999999
Q ss_pred h
Q 013004 447 I 447 (451)
Q Consensus 447 f 447 (451)
|
T Consensus 194 f 194 (320)
T 3a99_A 194 F 194 (320)
T ss_dssp C
T ss_pred C
Confidence 8
No 237
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=99.86 E-value=7.1e-22 Score=188.71 Aligned_cols=141 Identities=22% Similarity=0.280 Sum_probs=117.7
Q ss_pred HhcCCCCCCccCccCCceEEEEEe-CCCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEE-ecCCeeeEE
Q 013004 297 ATDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFC-TTVTEKLLV 374 (451)
Q Consensus 297 ~~~~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~-~~~~~~~lv 374 (451)
..++|+..+.||+|+||.||+|+. .+++.||||++...... ..+.+|+.++..++|++++..++++ ...+..++|
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 83 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH---PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMV 83 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---C---CCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccc---hHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEE
Confidence 346788999999999999999996 56889999986543222 2578899999999988887777665 567778999
Q ss_pred EecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceee---CCCCCccchhh
Q 013004 375 YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILL---DEDADQSSKTI 447 (451)
Q Consensus 375 ~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILl---d~~~~~~i~df 447 (451)
|||+ +|+|.+++..... .+++.++..++.|++.||.|||+. +|+||||||+|||+ ++++.+|++||
T Consensus 84 ~e~~-~~~L~~~~~~~~~---~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Df 152 (296)
T 4hgt_A 84 MELL-GPSLEDLFNFCSR---KFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDF 152 (296)
T ss_dssp EECC-CCBHHHHHHHTTS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCC
T ss_pred EEcc-CCCHHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecC
Confidence 9999 9999999975432 389999999999999999999999 99999999999999 78889999998
No 238
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=99.86 E-value=5.3e-22 Score=192.86 Aligned_cols=147 Identities=23% Similarity=0.336 Sum_probs=120.9
Q ss_pred hcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHH-HHhcCCCCCccceeeEEecCCeeeEEE
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVK-IISMAVHRNLLRLYGFCTTVTEKLLVY 375 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~-~l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (451)
.++|+..+.||+|+||.||+|... +++.||||+++.........++..|+. +++.++||||+++++++...+..++||
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~ 100 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM 100 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence 467888899999999999999974 689999999965433333345566665 778889999999999999999999999
Q ss_pred ecCCCCChhHHhhccC-CCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 376 PYMTNGSVASRLRERQ-SSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 376 ey~~~gsL~~~l~~~~-~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
||+++ +|.+++.... .....+++..+..++.|++.||.|||+. ++|+||||||+||+++.++.+||+||
T Consensus 101 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~--~~ivH~dlkp~NIll~~~~~~kl~Df 170 (327)
T 3aln_A 101 ELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKEN--LKIIHRDIKPSNILLDRSGNIKLCDF 170 (327)
T ss_dssp CCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHH--HSCCCSCCCGGGEEEETTTEEEECCC
T ss_pred eecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhcc--CCEeECCCCHHHEEEcCCCCEEEccC
Confidence 99985 7777775311 1123489999999999999999999984 27999999999999999999999998
No 239
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=99.86 E-value=3.9e-22 Score=192.62 Aligned_cols=142 Identities=21% Similarity=0.276 Sum_probs=124.0
Q ss_pred HhcCCCCCCccCccCCceEEEEEeCCCCEEEEEEccccccc-ccHHHHHHHHHHHhcCC--CCCccceeeEEecCCeeeE
Q 013004 297 ATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTS-GGELQFQTEVKIISMAV--HRNLLRLYGFCTTVTEKLL 373 (451)
Q Consensus 297 ~~~~f~~~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~-~~~~~~~~E~~~l~~l~--H~niv~l~~~~~~~~~~~l 373 (451)
..++|+..+.||+|+||.||+|+..+++.||||.+...... .....+.+|+.++..++ |+||+++++++......++
T Consensus 26 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~l 105 (313)
T 3cek_A 26 KGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM 105 (313)
T ss_dssp TTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEE
T ss_pred ccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEE
Confidence 34568888999999999999999888999999998654322 22347899999999997 5999999999999999999
Q ss_pred EEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 374 VYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 374 v~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
||| +.+++|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+|||+++ +.+|++||
T Consensus 106 v~e-~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~-~~~kL~Df 170 (313)
T 3cek_A 106 VME-CGNIDLNSWLKKKK----SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVD-GMLKLIDF 170 (313)
T ss_dssp EEC-CCSEEHHHHHHHCS----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEET-TEEEECCC
T ss_pred EEe-cCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEEC-CeEEEeec
Confidence 999 66889999998753 388999999999999999999999 9999999999999964 78999998
No 240
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=99.86 E-value=9.6e-22 Score=192.08 Aligned_cols=140 Identities=24% Similarity=0.292 Sum_probs=114.2
Q ss_pred hcCCCCC-CccCccCCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEec----CCee
Q 013004 298 TDGFSNK-NILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTT----VTEK 371 (451)
Q Consensus 298 ~~~f~~~-~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~----~~~~ 371 (451)
.++|... ++||+|+||.||+|+.. +++.||||++.... ....+....+..++||||+++++++.. ....
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 101 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP-----KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCL 101 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH-----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH-----HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceE
Confidence 4567764 56999999999999975 68999999985421 112223334567799999999999876 4458
Q ss_pred eEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCC---CCccchhh
Q 013004 372 LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDED---ADQSSKTI 447 (451)
Q Consensus 372 ~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~---~~~~i~df 447 (451)
++||||+++|+|.+++..... ..+++.++..++.|++.||.|||+. +|+||||||+|||++.+ +.+|++||
T Consensus 102 ~lv~e~~~gg~L~~~l~~~~~--~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~Df 175 (336)
T 3fhr_A 102 LIIMECMEGGELFSRIQERGD--QAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDF 175 (336)
T ss_dssp EEEEECCTTEEHHHHHHTC-C--CCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCC
T ss_pred EEEEeccCCCCHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEecc
Confidence 999999999999999987533 3489999999999999999999999 99999999999999874 45899998
No 241
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=99.86 E-value=6.2e-22 Score=192.66 Aligned_cols=142 Identities=22% Similarity=0.327 Sum_probs=121.2
Q ss_pred hcCCCCCCccCccCCceEEEEEe--CCCCEEEEEEcccccccccHHHHHHHHHHHhcCCCC------CccceeeEEecCC
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRL--ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHR------NLLRLYGFCTTVT 369 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~--~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~------niv~l~~~~~~~~ 369 (451)
.++|+..+.||+|+||.||+|.. .+++.||||+++... .....+.+|+.++..++|+ +++++++++...+
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~ 90 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD--RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHG 90 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH--HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETT
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC--chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCC
Confidence 35688889999999999999986 357899999986432 2234678888888877655 4999999999999
Q ss_pred eeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCC-----------
Q 013004 370 EKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDE----------- 438 (451)
Q Consensus 370 ~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~----------- 438 (451)
..++||||+ +++|.+++..... ..+++..+..++.|++.||+|||++ +|+||||||+|||++.
T Consensus 91 ~~~lv~e~~-~~~l~~~l~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~~~~ 164 (339)
T 1z57_A 91 HICIVFELL-GLSTYDFIKENGF--LPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPKI 164 (339)
T ss_dssp EEEEEEECC-CCBHHHHHHHTTT--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEEC---
T ss_pred cEEEEEcCC-CCCHHHHHHhcCC--CCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccccCCcc
Confidence 999999999 8999999987542 2488999999999999999999999 9999999999999998
Q ss_pred --------CCCccchhh
Q 013004 439 --------DADQSSKTI 447 (451)
Q Consensus 439 --------~~~~~i~df 447 (451)
++.+|++||
T Consensus 165 ~~~~~~~~~~~~kl~Df 181 (339)
T 1z57_A 165 KRDERTLINPDIKVVDF 181 (339)
T ss_dssp -CEEEEESCCCEEECCC
T ss_pred ccccccccCCCceEeeC
Confidence 567899998
No 242
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=99.86 E-value=2.4e-22 Score=210.76 Aligned_cols=146 Identities=25% Similarity=0.364 Sum_probs=123.7
Q ss_pred hcCCCCCCccCccCCceEEEEEe-CCCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEec------CCe
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTT------VTE 370 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~------~~~ 370 (451)
.++|...+.||+|+||.||+|.. .+|+.||||+++..........+.+|+.++..++||||+++++++.. .+.
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~ 92 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL 92 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence 36799999999999999999986 46899999998765443344579999999999999999999998765 667
Q ss_pred eeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCC---ccchhh
Q 013004 371 KLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDAD---QSSKTI 447 (451)
Q Consensus 371 ~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~---~~i~df 447 (451)
.++||||+++|+|.+++..... ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++. ++++||
T Consensus 93 ~~LVmEy~~ggsL~~~L~~~~~-~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~DF 168 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYLNQFEN-CCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDL 168 (676)
T ss_dssp CCCEEECCSSCBHHHHHHSSSC-TTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEECSC
T ss_pred EEEEEEeCCCCCHHHHHHhccc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEccc
Confidence 8999999999999999987532 23488899999999999999999999 9999999999999998765 788887
No 243
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=99.86 E-value=1.1e-21 Score=187.40 Aligned_cols=140 Identities=22% Similarity=0.282 Sum_probs=120.0
Q ss_pred hcCCCCCCccCccCCceEEEEEe-CCCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEE-ecCCeeeEEE
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFC-TTVTEKLLVY 375 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~-~~~~~~~lv~ 375 (451)
.++|+..+.||+|+||.||+|+. .+++.||||++..... ...+.+|+.++..++|++++..+.++ ......++||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK---HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM 84 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS---CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc---hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEE
Confidence 45788889999999999999996 5789999998854322 23688999999999998877776655 5567789999
Q ss_pred ecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeC---CCCCccchhh
Q 013004 376 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLD---EDADQSSKTI 447 (451)
Q Consensus 376 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld---~~~~~~i~df 447 (451)
||+ +++|.+++..... .+++..+..++.|++.||+|||++ +|+||||||+|||++ +++.+|++||
T Consensus 85 e~~-~~~L~~~~~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Df 152 (296)
T 3uzp_A 85 ELL-GPSLEDLFNFCSR---KFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDF 152 (296)
T ss_dssp ECC-CCBHHHHHHHTTT---CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCC
T ss_pred Eec-CCCHHHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeC
Confidence 999 9999999975432 489999999999999999999999 999999999999994 7789999998
No 244
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=99.86 E-value=2.4e-21 Score=198.00 Aligned_cols=140 Identities=20% Similarity=0.253 Sum_probs=119.5
Q ss_pred hcCCCCCCccCccCCceEEEEEe-CCCCEEEEEEcccccccccHHHHHHHHHHHhcCCC-CCccceeeEEecCCeeeEEE
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVH-RNLLRLYGFCTTVTEKLLVY 375 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H-~niv~l~~~~~~~~~~~lv~ 375 (451)
.++|...+.||+|+||.||+|+. .+++.||||+++.... ..++.+|+.++..++| +++..+..++...+..++||
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~---~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvm 82 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK---HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVM 82 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS---SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc---cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEE
Confidence 36788899999999999999996 5689999998754332 2357899999999987 55556666667788899999
Q ss_pred ecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceee---CCCCCccchhh
Q 013004 376 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILL---DEDADQSSKTI 447 (451)
Q Consensus 376 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILl---d~~~~~~i~df 447 (451)
||+ +++|.+++..... .+++.++..++.|++.||.|||++ +|+||||||+|||+ +.++.+||+||
T Consensus 83 e~~-g~sL~~ll~~~~~---~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DF 150 (483)
T 3sv0_A 83 DLL-GPSLEDLFNFCSR---KLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDF 150 (483)
T ss_dssp ECC-CCBHHHHHHHTTT---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCC
T ss_pred ECC-CCCHHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeC
Confidence 999 9999999975432 489999999999999999999999 99999999999999 57889999998
No 245
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=99.86 E-value=9.8e-22 Score=189.85 Aligned_cols=143 Identities=24% Similarity=0.373 Sum_probs=112.0
Q ss_pred hcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccccHH-HHHHHHHHHhcCCCCCccceeeEEecCCeeeEEE
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGEL-QFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 375 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~-~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (451)
.++|+..+.||+|+||.||+|+.. +++.||||+++......... .+.++..++..++||||+++++++...+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~ 103 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM 103 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence 456777889999999999999975 68999999986543322222 3445556788889999999999999999999999
Q ss_pred ecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhc-CCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 376 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHE-HCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 376 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~-~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
||+ ++.+........ ..+++..+..++.|++.||.|||+ + +|+||||||+||+++.++.+||+||
T Consensus 104 e~~-~~~~~~l~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~kl~df 169 (318)
T 2dyl_A 104 ELM-GTCAEKLKKRMQ---GPIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLDERGQIKLCDF 169 (318)
T ss_dssp CCC-SEEHHHHHHHHT---SCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEECTTSCEEECCC
T ss_pred ecc-CCcHHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEECCCCCEEEEEC
Confidence 999 445555444322 248899999999999999999998 5 8999999999999999999999998
No 246
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=99.85 E-value=6e-22 Score=197.26 Aligned_cols=136 Identities=25% Similarity=0.358 Sum_probs=112.6
Q ss_pred hcCCCCCCccCccCCceEEEEEe-CCCCEEEEEEcccccccccHHHHHHHHHHHhcCC--------CCCccceeeEEe--
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAV--------HRNLLRLYGFCT-- 366 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~--------H~niv~l~~~~~-- 366 (451)
.++|...+.||+|+||+||+|+. .+++.||||+++... .....+.+|+.++..++ |+||+++++++.
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~ 113 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAE--HYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKIS 113 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH--HHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCC--cchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeec
Confidence 36788889999999999999986 468899999986432 22346889999998875 788999999987
Q ss_pred --cCCeeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCC
Q 013004 367 --TVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDA 440 (451)
Q Consensus 367 --~~~~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~ 440 (451)
.....++||||+ +|++.+.+..... ..+++..+..++.|++.||.|||+++ +|+||||||+|||++.++
T Consensus 114 ~~~~~~~~lv~e~~-~~~l~~~~~~~~~--~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~ 184 (397)
T 1wak_A 114 GVNGTHICMVFEVL-GHHLLKWIIKSNY--QGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNE 184 (397)
T ss_dssp ETTEEEEEEEECCC-CCBHHHHHHHTTT--SCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCH
T ss_pred CCCCceEEEEEecc-CccHHHHHHhccc--CCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccc
Confidence 556789999999 6677777665432 24899999999999999999999853 799999999999999875
No 247
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=99.85 E-value=8.2e-22 Score=199.34 Aligned_cols=138 Identities=25% Similarity=0.239 Sum_probs=110.8
Q ss_pred CCCCccCccCCceEEEEEeCCCCEEEEEEcccccccccHHHHHHHHHHHhcC-CCCCccceeeEEecCCeeeEEEecCCC
Q 013004 302 SNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMA-VHRNLLRLYGFCTTVTEKLLVYPYMTN 380 (451)
Q Consensus 302 ~~~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~ey~~~ 380 (451)
...+.||+|+||+||.+...+|+.||||++.... ...+.+|+.++..+ +|||||++++++.+.+..++||||+.
T Consensus 18 ~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~----~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~- 92 (434)
T 2rio_A 18 VSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF----CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN- 92 (434)
T ss_dssp EEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGG----HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-
T ss_pred eccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHH----HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-
Confidence 3457899999999987766689999999985432 23578899999875 89999999999999999999999996
Q ss_pred CChhHHhhccCCCCCC---CCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCC-------------CCccc
Q 013004 381 GSVASRLRERQSSLPP---LDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDED-------------ADQSS 444 (451)
Q Consensus 381 gsL~~~l~~~~~~~~~---l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~-------------~~~~i 444 (451)
|+|.+++......... .++..+..++.|++.||+|||+. +|+||||||+|||++.+ +.+||
T Consensus 93 gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL 169 (434)
T 2rio_A 93 LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILI 169 (434)
T ss_dssp EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEE
T ss_pred CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCCCceEEEE
Confidence 6999999865332111 13334578999999999999999 99999999999999754 47899
Q ss_pred hhh
Q 013004 445 KTI 447 (451)
Q Consensus 445 ~df 447 (451)
+||
T Consensus 170 ~DF 172 (434)
T 2rio_A 170 SDF 172 (434)
T ss_dssp CCC
T ss_pred ccc
Confidence 998
No 248
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=99.84 E-value=1.6e-21 Score=196.99 Aligned_cols=138 Identities=22% Similarity=0.292 Sum_probs=113.8
Q ss_pred cCCCCCCccCccCCceEEEEEeCCCCEEEEEEcccccccccHHHHHHHHHHHhcC-CCCCccceeeEEecCCeeeEEEec
Q 013004 299 DGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMA-VHRNLLRLYGFCTTVTEKLLVYPY 377 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~ey 377 (451)
.+|...++||+|+||+||.....+++.||||++..... ..+.+|+.++..+ +|||||++++++.+....++||||
T Consensus 24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~----~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~ 99 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF----SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIEL 99 (432)
T ss_dssp EEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE----EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred EEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH----HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEEC
Confidence 45777789999999997655556789999999864322 1356899999988 799999999999999999999999
Q ss_pred CCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCC---CC--Cccchhh
Q 013004 378 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDE---DA--DQSSKTI 447 (451)
Q Consensus 378 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~---~~--~~~i~df 447 (451)
+. |+|.+++...... ..+.++..++.|++.||.|||+. +|+||||||+|||++. ++ .++|+||
T Consensus 100 ~~-g~L~~~l~~~~~~---~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DF 167 (432)
T 3p23_A 100 CA-ATLQEYVEQKDFA---HLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDF 167 (432)
T ss_dssp CS-EEHHHHHHSSSCC---CCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCT
T ss_pred CC-CCHHHHHHhcCCC---ccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEecc
Confidence 96 6999999865432 44456678999999999999999 9999999999999953 22 4669998
No 249
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.84 E-value=2.7e-21 Score=184.14 Aligned_cols=135 Identities=13% Similarity=0.061 Sum_probs=107.4
Q ss_pred HHHHhcCCCCCCccCccCCceEEEEEeCCCCEEEEEEcccccccc-----------------cHHHHHHHHHHHhcCCCC
Q 013004 294 LQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSG-----------------GELQFQTEVKIISMAVHR 356 (451)
Q Consensus 294 ~~~~~~~f~~~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~-----------------~~~~~~~E~~~l~~l~H~ 356 (451)
+......|...+.||+|+||.||+|+..+|+.||||.++...... ....+.+|+.+++.++
T Consensus 85 ~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~-- 162 (282)
T 1zar_A 85 LVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ-- 162 (282)
T ss_dssp HHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--
T ss_pred HHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--
Confidence 333444566679999999999999999779999999986432110 1336889999999998
Q ss_pred CccceeeEEecCCeeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceee
Q 013004 357 NLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILL 436 (451)
Q Consensus 357 niv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILl 436 (451)
| +++.+++.. +..++||||+++|+|.+ +.. .....++.|++.||.|||+. +|+||||||+|||+
T Consensus 163 ~-~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~----------~~~~~i~~qi~~~l~~lH~~---giiHrDlkp~NILl 226 (282)
T 1zar_A 163 G-LAVPKVYAW-EGNAVLMELIDAKELYR-VRV----------ENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVLV 226 (282)
T ss_dssp T-SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC----------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEE
T ss_pred C-CCcCeEEec-cceEEEEEecCCCcHHH-cch----------hhHHHHHHHHHHHHHHHHHC---CCEeCCCCHHHEEE
Confidence 5 667665543 55699999999999988 421 12346999999999999999 99999999999999
Q ss_pred CCCCCccchhh
Q 013004 437 DEDADQSSKTI 447 (451)
Q Consensus 437 d~~~~~~i~df 447 (451)
+ ++.++|+||
T Consensus 227 ~-~~~vkl~DF 236 (282)
T 1zar_A 227 S-EEGIWIIDF 236 (282)
T ss_dssp E-TTEEEECCC
T ss_pred E-CCcEEEEEC
Confidence 9 999999998
No 250
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=99.84 E-value=4.3e-21 Score=188.00 Aligned_cols=142 Identities=19% Similarity=0.312 Sum_probs=119.5
Q ss_pred hcCCCCCCccCccCCceEEEEEeC-CC-CEEEEEEcccccccccHHHHHHHHHHHhcCCCCC------ccceeeEEecCC
Q 013004 298 TDGFSNKNILGRGGFGKVYKGRLA-DG-KLVAVKRLKEERTSGGELQFQTEVKIISMAVHRN------LLRLYGFCTTVT 369 (451)
Q Consensus 298 ~~~f~~~~~lG~G~fg~Vy~~~~~-~~-~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~n------iv~l~~~~~~~~ 369 (451)
.++|+..+.||+|+||+||+|+.. ++ +.||||+++... .....+.+|+.++..++|++ ++.+.+++...+
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 95 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVG--KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHG 95 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCH--HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETT
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccc--cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCC
Confidence 357888899999999999999874 34 689999986432 22346788999988887665 899999999999
Q ss_pred eeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceee-------------
Q 013004 370 EKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILL------------- 436 (451)
Q Consensus 370 ~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILl------------- 436 (451)
..++||||+ ++++.+.+..... ..+++.++..++.|++.||+|||++ +|+||||||+|||+
T Consensus 96 ~~~lv~e~~-~~~l~~~l~~~~~--~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~ 169 (355)
T 2eu9_A 96 HMCIAFELL-GKNTFEFLKENNF--QPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHK 169 (355)
T ss_dssp EEEEEEECC-CCBHHHHHHHTTT--CCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEECCC-
T ss_pred eEEEEEecc-CCChHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecccccccccccc
Confidence 999999999 6777777766432 2489999999999999999999999 99999999999999
Q ss_pred ------CCCCCccchhh
Q 013004 437 ------DEDADQSSKTI 447 (451)
Q Consensus 437 ------d~~~~~~i~df 447 (451)
+.++.+|++||
T Consensus 170 ~~~~~~~~~~~~kl~Df 186 (355)
T 2eu9_A 170 SCEEKSVKNTSIRVADF 186 (355)
T ss_dssp CCCEEEESCCCEEECCC
T ss_pred cccccccCCCcEEEeec
Confidence 56788999998
No 251
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=99.84 E-value=5.8e-21 Score=189.82 Aligned_cols=145 Identities=23% Similarity=0.310 Sum_probs=120.2
Q ss_pred HhcCCCCCCccCccCCceEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHHHhcCC-CC-----CccceeeEEecCC
Q 013004 297 ATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAV-HR-----NLLRLYGFCTTVT 369 (451)
Q Consensus 297 ~~~~f~~~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~-H~-----niv~l~~~~~~~~ 369 (451)
..++|...+.||+|+||+||+|+.. +++.||||+++... ....++.+|+.++..++ |+ +|+++++++...+
T Consensus 52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~ 129 (382)
T 2vx3_A 52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK--AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRN 129 (382)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH--HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETT
T ss_pred eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH--HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCC
Confidence 3567888899999999999999865 68899999986432 22345777888887775 44 4999999999999
Q ss_pred eeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeC--CCCCccchhh
Q 013004 370 EKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLD--EDADQSSKTI 447 (451)
Q Consensus 370 ~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld--~~~~~~i~df 447 (451)
..++||||+. |+|.+++..... ..+++..+..++.|++.||.|||++ ..+|+||||||+|||++ .++.+||+||
T Consensus 130 ~~~lv~e~~~-~~L~~~l~~~~~--~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DF 205 (382)
T 2vx3_A 130 HLCLVFEMLS-YNLYDLLRNTNF--RGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDF 205 (382)
T ss_dssp EEEEEEECCC-CBHHHHHHHTTT--SCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCC
T ss_pred ceEEEEecCC-CCHHHHHhhcCc--CCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEec
Confidence 9999999996 599999987542 2489999999999999999999953 33899999999999995 4678999998
No 252
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=99.82 E-value=7e-21 Score=188.12 Aligned_cols=142 Identities=19% Similarity=0.333 Sum_probs=118.4
Q ss_pred cCCCCCCccCccCCceEEEEEe-CCCCEEEEEEcccccccccHHHHHHHHHHHhcCC-----------CCCccceeeEEe
Q 013004 299 DGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAV-----------HRNLLRLYGFCT 366 (451)
Q Consensus 299 ~~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~-----------H~niv~l~~~~~ 366 (451)
++|...+.||+|+||.||+|+. .+++.||||+++... .....+.+|+.++..++ |+||+++++++.
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~ 96 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK--VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN 96 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH--HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc--cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence 4677889999999999999996 468899999986432 22346788998888776 899999999987
Q ss_pred cCC----eeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeC-----
Q 013004 367 TVT----EKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLD----- 437 (451)
Q Consensus 367 ~~~----~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld----- 437 (451)
..+ ..++||||+ +++|.+++..... ..+++..+..++.|++.||+|||+++ +|+||||||+|||++
T Consensus 97 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~--~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~~~~ 171 (373)
T 1q8y_A 97 HKGPNGVHVVMVFEVL-GENLLALIKKYEH--RGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDSP 171 (373)
T ss_dssp EEETTEEEEEEEECCC-CEEHHHHHHHTTT--SCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEETT
T ss_pred ccCCCCceEEEEEecC-CCCHHHHHHHhhc--cCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEeccCCC
Confidence 643 689999999 8999999987533 23889999999999999999999853 799999999999995
Q ss_pred -CCCCccchhh
Q 013004 438 -EDADQSSKTI 447 (451)
Q Consensus 438 -~~~~~~i~df 447 (451)
.++.+||+||
T Consensus 172 ~~~~~~kl~Df 182 (373)
T 1q8y_A 172 ENLIQIKIADL 182 (373)
T ss_dssp TTEEEEEECCC
T ss_pred cCcceEEEccc
Confidence 3447899998
No 253
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.82 E-value=1.5e-20 Score=194.84 Aligned_cols=127 Identities=15% Similarity=0.252 Sum_probs=101.3
Q ss_pred CCCccCccCCceEEEEEeCCCCEEEEEEcccccccc-------cHHHHHHHHHHHhcCCCCCccceeeEEecCCeeeEEE
Q 013004 303 NKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSG-------GELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 375 (451)
Q Consensus 303 ~~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~-------~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (451)
..+.||+|+||+||+|+. .++.+|+|+........ ....+.+|+.+++.++||||+++..++...+..++||
T Consensus 340 ~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVm 418 (540)
T 3en9_A 340 PEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMM 418 (540)
T ss_dssp --------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEE
T ss_pred CCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEE
Confidence 357899999999999965 57889999864322111 1235899999999999999997777777778889999
Q ss_pred ecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 376 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 376 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
||+++|+|.+++.. +..++.|+++||+|||++ +|+||||||+|||+++ .+||+||
T Consensus 419 E~~~ggsL~~~l~~------------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DF 473 (540)
T 3en9_A 419 SYINGKLAKDVIED------------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDF 473 (540)
T ss_dssp ECCCSEEHHHHSTT------------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCC
T ss_pred ECCCCCCHHHHHHH------------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEEC
Confidence 99999999999865 347899999999999999 9999999999999999 9999998
No 254
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.82 E-value=1.5e-20 Score=181.81 Aligned_cols=174 Identities=26% Similarity=0.385 Sum_probs=131.6
Q ss_pred EEEeehhHHHhhhh-cchhhhhhhhhhhhhccCCCcceE-------------EEeecCCccccccCCccccCCCCCCEEe
Q 013004 36 TLLVTLKAVLQECE-QLHLLISFLIFIRVLQSSSNLFVY-------------LISDLGNAALSGELAPELGQLKNLELLE 101 (451)
Q Consensus 36 ~~~~~l~~~~~~~~-~l~~~~~~~~~~~~l~~~~n~~~~-------------~~~~l~~n~~~g~~p~~l~~l~~L~~L~ 101 (451)
..|..|....+.+. .+|..++.++.|+.|++++|.+.. ..++|++|.++|.+|..++.+. |+.|+
T Consensus 125 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~ 203 (313)
T 1ogq_A 125 KTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVD 203 (313)
T ss_dssp TTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEE
T ss_pred CCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEE
Confidence 33444444434444 445555666666666666665541 2345666666666666666665 77777
Q ss_pred CcCCccCccCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeeccccccCCCChhhhhcCCCCCeeccCCccccC
Q 013004 102 LYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSNNRLSG 181 (451)
Q Consensus 102 ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~ 181 (451)
+++|.+++.+|..+..+++|+.|++++|.+++.+|. +..+++|++|+|++|++++.+|..+..+++|+.|++++|+++|
T Consensus 204 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 282 (313)
T 1ogq_A 204 LSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCG 282 (313)
T ss_dssp CCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEE
T ss_pred CcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccc
Confidence 777777777777778888888888888888766655 7888999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCcccccccccccccCCCCCCCCC
Q 013004 182 PVPDNGSFSQFTPISFENNLNLCGPNTKKPC 212 (451)
Q Consensus 182 ~~p~~~~~~~~~~~~~~~n~~lCg~~~~~~c 212 (451)
.+|..+.+..+....+.+|+.+||.+.. .|
T Consensus 283 ~ip~~~~l~~L~~l~l~~N~~lc~~p~~-~C 312 (313)
T 1ogq_A 283 EIPQGGNLQRFDVSAYANNKCLCGSPLP-AC 312 (313)
T ss_dssp ECCCSTTGGGSCGGGTCSSSEEESTTSS-CC
T ss_pred cCCCCccccccChHHhcCCCCccCCCCC-CC
Confidence 9999888899999999999999997654 45
No 255
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.79 E-value=3.5e-20 Score=186.17 Aligned_cols=144 Identities=17% Similarity=0.179 Sum_probs=106.8
Q ss_pred CCCCCCccCccCCceEEEEEe-CCCCEEEEEEccccccc--ccHHHHHHHHHHHhcCCC-CCcccee---------eE--
Q 013004 300 GFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTS--GGELQFQTEVKIISMAVH-RNLLRLY---------GF-- 364 (451)
Q Consensus 300 ~f~~~~~lG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~--~~~~~~~~E~~~l~~l~H-~niv~l~---------~~-- 364 (451)
.|...++||+|+||+||+|++ .+|+.||||+++..... .....+.+|+.++..++| +|..... ..
T Consensus 79 ~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 158 (413)
T 3dzo_A 79 TLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVK 158 (413)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEE
T ss_pred eEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcc
Confidence 455668899999999999995 46899999998733222 224578999999999987 3221111 11
Q ss_pred ----------Eec-----CCeeeEEEecCCCCChhHHhhcc---CCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeee
Q 013004 365 ----------CTT-----VTEKLLVYPYMTNGSVASRLRER---QSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIH 426 (451)
Q Consensus 365 ----------~~~-----~~~~~lv~ey~~~gsL~~~l~~~---~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH 426 (451)
+.. ....+++|+++ +++|.+++... ......++|..+..++.|+++||+|||++ +|+|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~iiH 234 (413)
T 3dzo_A 159 DPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GLVH 234 (413)
T ss_dssp CCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEEC
T ss_pred cCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---Cccc
Confidence 111 22346667655 68999888521 11223478889999999999999999999 9999
Q ss_pred cCCCCCceeeCCCCCccchhh
Q 013004 427 RDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 427 rDlK~~NILld~~~~~~i~df 447 (451)
|||||+|||++.++.+||+||
T Consensus 235 rDiKp~NILl~~~~~~kL~DF 255 (413)
T 3dzo_A 235 TYLRPVDIVLDQRGGVFLTGF 255 (413)
T ss_dssp SCCCGGGEEECTTCCEEECCG
T ss_pred CCcccceEEEecCCeEEEEec
Confidence 999999999999999999998
No 256
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.75 E-value=7.9e-19 Score=164.88 Aligned_cols=131 Identities=18% Similarity=0.202 Sum_probs=99.5
Q ss_pred CCCCCccCccCCceEEEEEe-CCCCE--EEEEEccccccc-----------------------ccHHHHHHHHHHHhcCC
Q 013004 301 FSNKNILGRGGFGKVYKGRL-ADGKL--VAVKRLKEERTS-----------------------GGELQFQTEVKIISMAV 354 (451)
Q Consensus 301 f~~~~~lG~G~fg~Vy~~~~-~~~~~--vAvK~~~~~~~~-----------------------~~~~~~~~E~~~l~~l~ 354 (451)
|+..+.||+|+||.||+|.. .+|+. ||||+++..... .....+.+|+..+..+.
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 45668899999999999997 67888 999987543111 00125789999999998
Q ss_pred CCCc--cceeeEEecCCeeeEEEecCCC-C----ChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHh-cCCCCCeee
Q 013004 355 HRNL--LRLYGFCTTVTEKLLVYPYMTN-G----SVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLH-EHCDPKIIH 426 (451)
Q Consensus 355 H~ni--v~l~~~~~~~~~~~lv~ey~~~-g----sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH-~~~~~~iiH 426 (451)
|+++ ...+++ ...++||||+.+ | +|.+.... .++..+..++.|++.||.||| +. +|+|
T Consensus 129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~-------~~~~~~~~i~~qi~~~l~~lH~~~---givH 194 (258)
T 1zth_A 129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE-------LKELDVEGIFNDVVENVKRLYQEA---ELVH 194 (258)
T ss_dssp HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG-------GGGSCHHHHHHHHHHHHHHHHHTS---CEEC
T ss_pred hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc-------cChHHHHHHHHHHHHHHHHHHHHC---CEEe
Confidence 8764 333332 356899999942 4 56555432 224456789999999999999 88 9999
Q ss_pred cCCCCCceeeCCCCCccchhh
Q 013004 427 RDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 427 rDlK~~NILld~~~~~~i~df 447 (451)
|||||+|||+++ .++++||
T Consensus 195 rDlkp~NILl~~--~~~liDF 213 (258)
T 1zth_A 195 ADLSEYNIMYID--KVYFIDM 213 (258)
T ss_dssp SSCSTTSEEESS--SEEECCC
T ss_pred CCCCHHHEEEcC--cEEEEEC
Confidence 999999999998 8999998
No 257
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.74 E-value=1.4e-18 Score=188.07 Aligned_cols=151 Identities=32% Similarity=0.492 Sum_probs=109.0
Q ss_pred cchhhhhhhhhhhhhccCCCcceE------------EEeecCCccccccCCccccCCCCCCEEeCcCCccCccCCcccc-
Q 013004 50 QLHLLISFLIFIRVLQSSSNLFVY------------LISDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALG- 116 (451)
Q Consensus 50 ~l~~~~~~~~~~~~l~~~~n~~~~------------~~~~l~~n~~~g~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~- 116 (451)
.+|..++.++.|+.|++++|.+.. ..++|++|.++|.+|.+++.+++|+.|++++|+++|.+|..+.
T Consensus 481 ~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~ 560 (768)
T 3rgz_A 481 EIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFK 560 (768)
T ss_dssp CCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGT
T ss_pred cCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhc
Confidence 345556666667777777766542 3456777777777777777777777777777777766665432
Q ss_pred ---------------------------------------------------------------------CCCCCcEEeCC
Q 013004 117 ---------------------------------------------------------------------NLIKLKSLDLY 127 (451)
Q Consensus 117 ---------------------------------------------------------------------~l~~L~~L~ls 127 (451)
.+++|+.|||+
T Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs 640 (768)
T 3rgz_A 561 QSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMS 640 (768)
T ss_dssp TTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECC
T ss_pred ccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECc
Confidence 34567778888
Q ss_pred CCcCCccCcccccCCcccceeeccccccCCCChhhhhcCCCCCeeccCCccccCcCCCC-CCCCcccccccccc
Q 013004 128 SNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPDN-GSFSQFTPISFENN 200 (451)
Q Consensus 128 ~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~-~~~~~~~~~~~~~n 200 (451)
+|+++|.+|.+++++++|+.|+|++|+++|.+|..++.+++|+.||+++|+++|.+|.. ..+..+..+.+.+|
T Consensus 641 ~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N 714 (768)
T 3rgz_A 641 YNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNN 714 (768)
T ss_dssp SSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSS
T ss_pred CCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCC
Confidence 88888888888888888888888888888888888888888888888888888888753 34555666666666
No 258
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.71 E-value=3.9e-18 Score=164.74 Aligned_cols=175 Identities=24% Similarity=0.366 Sum_probs=135.1
Q ss_pred eceeeecee-ccceEEEeehhHHHhhhh---cchhhhhhhhhhhhhccCC-Ccce------------EEEeecCCccccc
Q 013004 23 VGIICLGIC-ARGFTLLVTLKAVLQECE---QLHLLISFLIFIRVLQSSS-NLFV------------YLISDLGNAALSG 85 (451)
Q Consensus 23 ~~~~~~~~~-~~~~~~~~~l~~~~~~~~---~l~~~~~~~~~~~~l~~~~-n~~~------------~~~~~l~~n~~~g 85 (451)
.||.|.... ... ++.|...-+.+. .+|..++.+..|+.|++++ |.+. +..++|++|.+++
T Consensus 39 ~gv~C~~~~~~~~---l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~ 115 (313)
T 1ogq_A 39 LGVLCDTDTQTYR---VNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSG 115 (313)
T ss_dssp TTEEECCSSSCCC---EEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEE
T ss_pred cceEeCCCCCCce---EEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCC
Confidence 566665321 022 333333333444 5778888888999999884 6554 2356788899988
Q ss_pred cCCccccCCCCCCEEeCcCCccCccCCccccCCCCCcEEeCCCCcCCccCcccccCCc-ccceeeccccccCCCChhhhh
Q 013004 86 ELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLK-QLKYLRLNNNSLSGLIPTSLT 164 (451)
Q Consensus 86 ~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~-~L~~L~ls~N~l~~~~p~~~~ 164 (451)
.+|..++.+++|++|++++|.+++.+|..+..+++|+.|++++|+++|.+|..+++++ +|+.|++++|++++.+|..+.
T Consensus 116 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~ 195 (313)
T 1ogq_A 116 AIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFA 195 (313)
T ss_dssp ECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGG
T ss_pred cCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHh
Confidence 8999999999999999999999988999999999999999999999888999998887 899999999999888888888
Q ss_pred cCCCCCeeccCCccccCcCCCC-CCCCccccccccccc
Q 013004 165 TITSLNILDLSNNRLSGPVPDN-GSFSQFTPISFENNL 201 (451)
Q Consensus 165 ~l~~L~~l~ls~N~l~~~~p~~-~~~~~~~~~~~~~n~ 201 (451)
.+. |+.|++++|.+++.+|.. ..+..+..+.+.+|.
T Consensus 196 ~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~ 232 (313)
T 1ogq_A 196 NLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNS 232 (313)
T ss_dssp GCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSE
T ss_pred CCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCc
Confidence 886 999999999988876642 445666666666653
No 259
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.70 E-value=7.5e-18 Score=163.88 Aligned_cols=166 Identities=17% Similarity=0.176 Sum_probs=121.3
Q ss_pred ceEEEeehhHHHhhhhcchhhhhhhhhhhhhccCCCcceE-----------EEeecCCccccccCCccccC---------
Q 013004 34 GFTLLVTLKAVLQECEQLHLLISFLIFIRVLQSSSNLFVY-----------LISDLGNAALSGELAPELGQ--------- 93 (451)
Q Consensus 34 ~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~l~~~~n~~~~-----------~~~~l~~n~~~g~~p~~l~~--------- 93 (451)
.+..|+.|....+.+..+|..++.+..|+.|++++|.+.. ..++|++|.+.+.+|..++.
T Consensus 102 ~l~~L~~L~L~~n~l~~lp~~~~~l~~L~~L~Ls~n~l~~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~ 181 (328)
T 4fcg_A 102 RLSHLQHMTIDAAGLMELPDTMQQFAGLETLTLARNPLRALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQG 181 (328)
T ss_dssp GGTTCSEEEEESSCCCCCCSCGGGGTTCSEEEEESCCCCCCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEE
T ss_pred hCCCCCEEECCCCCccchhHHHhccCCCCEEECCCCccccCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhhcc
Confidence 3556666666666666777777778888888888776653 23566677777777777654
Q ss_pred CCCCCEEeCcCCccCccCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeeccccccCCCChhhhhcCCCCCeec
Q 013004 94 LKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILD 173 (451)
Q Consensus 94 l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ 173 (451)
+++|+.|++++|+++ .+|..++.+++|+.|+|++|+++ .+|+.++.+++|+.|+|++|++.+.+|..++.+++|+.|+
T Consensus 182 l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~-~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~ 259 (328)
T 4fcg_A 182 LVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS-ALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLI 259 (328)
T ss_dssp STTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCC-CCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEE
T ss_pred CCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCC-cCchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEE
Confidence 788888888888887 77777888888888888888887 4666777888888888888888777787788888888888
Q ss_pred cCCccccCcCCCC-CCCCccccccccccc
Q 013004 174 LSNNRLSGPVPDN-GSFSQFTPISFENNL 201 (451)
Q Consensus 174 ls~N~l~~~~p~~-~~~~~~~~~~~~~n~ 201 (451)
+++|++.+.+|.. ..+.++..+.+.+|.
T Consensus 260 L~~n~~~~~~p~~~~~l~~L~~L~L~~n~ 288 (328)
T 4fcg_A 260 LKDCSNLLTLPLDIHRLTQLEKLDLRGCV 288 (328)
T ss_dssp CTTCTTCCBCCTTGGGCTTCCEEECTTCT
T ss_pred CCCCCchhhcchhhhcCCCCCEEeCCCCC
Confidence 8888777777743 345556666666654
No 260
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.70 E-value=4.3e-17 Score=154.17 Aligned_cols=150 Identities=23% Similarity=0.228 Sum_probs=106.0
Q ss_pred hhhhhhhhhhccCCCcceE----------EEeecCCccccccCCccccCCCCCCEEeCcCCccCccCCccccCCCCCcEE
Q 013004 55 ISFLIFIRVLQSSSNLFVY----------LISDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSL 124 (451)
Q Consensus 55 ~~~~~~~~~l~~~~n~~~~----------~~~~l~~n~~~g~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L 124 (451)
+..++.|+.|++++|.+.. ..++|++|.+++..|..++.+++|+.|++++|++++..|..++.+++|+.|
T Consensus 59 l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 138 (272)
T 3rfs_A 59 IQYLPNVRYLALGGNKLHDISALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYL 138 (272)
T ss_dssp GGGCTTCCEEECTTSCCCCCGGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEE
T ss_pred cccCCCCcEEECCCCCCCCchhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEE
Confidence 4556677777777776542 345667777776555556777888888888888876666667777888888
Q ss_pred eCCCCcCCccCcccccCCcccceeeccccccCCCChhhhhcCCCCCeeccCCccccCcCCCC-CCCCccccccccccccc
Q 013004 125 DLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPDN-GSFSQFTPISFENNLNL 203 (451)
Q Consensus 125 ~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~-~~~~~~~~~~~~~n~~l 203 (451)
++++|++++..|..++.+++|+.|++++|++++..|..+..+++|+.|++++|++++.+|.. ..+.++..+.+.+|+..
T Consensus 139 ~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 218 (272)
T 3rfs_A 139 NLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWD 218 (272)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred ECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcc
Confidence 88888877655666677778888888888887766666777778888888888887766643 44566666666666544
Q ss_pred C
Q 013004 204 C 204 (451)
Q Consensus 204 C 204 (451)
|
T Consensus 219 ~ 219 (272)
T 3rfs_A 219 C 219 (272)
T ss_dssp C
T ss_pred c
Confidence 4
No 261
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.70 E-value=4.9e-17 Score=151.85 Aligned_cols=130 Identities=25% Similarity=0.293 Sum_probs=81.3
Q ss_pred EeecCCccccccCCccccCCCCCCEEeCcCCccCccCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeeccccc
Q 013004 75 ISDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNS 154 (451)
Q Consensus 75 ~~~l~~n~~~g~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~ 154 (451)
.++|++|.+++..|..+..+++|+.|+|++|++++..|..+..+++|+.|+|++|++++..|..++.+++|+.|+|++|+
T Consensus 63 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 142 (251)
T 3m19_A 63 WLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQ 142 (251)
T ss_dssp EEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCc
Confidence 34556666665555556667777777777777765555566667777777777777764444455666777777777777
Q ss_pred cCCCChhhhhcCCCCCeeccCCccccCcCCC-CCCCCcccccccccccccC
Q 013004 155 LSGLIPTSLTTITSLNILDLSNNRLSGPVPD-NGSFSQFTPISFENNLNLC 204 (451)
Q Consensus 155 l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~-~~~~~~~~~~~~~~n~~lC 204 (451)
+++..|..+..+++|+.|++++|++++.+|. ...+..+..+.+.+|+..|
T Consensus 143 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 193 (251)
T 3m19_A 143 LQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDC 193 (251)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCT
T ss_pred CCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeC
Confidence 7665555666666777777777777665542 2334455555555554433
No 262
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.68 E-value=1.5e-17 Score=161.76 Aligned_cols=161 Identities=20% Similarity=0.252 Sum_probs=138.5
Q ss_pred EeehhHHHhhhhcchhhhhhhhhhhhhccCCCcceE-----------EEeecCCccccccCCccccCCCCCCEEeCcCCc
Q 013004 38 LVTLKAVLQECEQLHLLISFLIFIRVLQSSSNLFVY-----------LISDLGNAALSGELAPELGQLKNLELLELYGNN 106 (451)
Q Consensus 38 ~~~l~~~~~~~~~l~~~~~~~~~~~~l~~~~n~~~~-----------~~~~l~~n~~~g~~p~~l~~l~~L~~L~ls~N~ 106 (451)
+..|....+.+..+|..++.+..|+.|++++|.+.. ..++|++|.++ .+|+.++.+++|+.|++++|+
T Consensus 83 l~~L~L~~n~l~~lp~~l~~l~~L~~L~L~~n~l~~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~ 161 (328)
T 4fcg_A 83 RVALELRSVPLPQFPDQAFRLSHLQHMTIDAAGLMELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACP 161 (328)
T ss_dssp CCEEEEESSCCSSCCSCGGGGTTCSEEEEESSCCCCCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEET
T ss_pred eeEEEccCCCchhcChhhhhCCCCCEEECCCCCccchhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCC
Confidence 444444556677888888889999999999998763 34678899998 899999999999999999999
Q ss_pred cCccCCccccC---------CCCCcEEeCCCCcCCccCcccccCCcccceeeccccccCCCChhhhhcCCCCCeeccCCc
Q 013004 107 LSGHIPSALGN---------LIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSNN 177 (451)
Q Consensus 107 l~~~~p~~~~~---------l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N 177 (451)
+.+.+|..++. +++|+.|+|++|+++ .+|..++++++|+.|+|++|++++ +|..++.+++|+.|++++|
T Consensus 162 ~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls~n 239 (328)
T 4fcg_A 162 ELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLRGC 239 (328)
T ss_dssp TCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEECTTC
T ss_pred CccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEEECcCC
Confidence 99999998765 999999999999998 899999999999999999999996 5678999999999999999
Q ss_pred cccCcCCCC-CCCCccccccccccc
Q 013004 178 RLSGPVPDN-GSFSQFTPISFENNL 201 (451)
Q Consensus 178 ~l~~~~p~~-~~~~~~~~~~~~~n~ 201 (451)
++.+.+|.. +.+.++..+.+.+|.
T Consensus 240 ~~~~~~p~~~~~l~~L~~L~L~~n~ 264 (328)
T 4fcg_A 240 TALRNYPPIFGGRAPLKRLILKDCS 264 (328)
T ss_dssp TTCCBCCCCTTCCCCCCEEECTTCT
T ss_pred cchhhhHHHhcCCCCCCEEECCCCC
Confidence 999998863 556777777777664
No 263
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.68 E-value=6.2e-18 Score=165.85 Aligned_cols=134 Identities=16% Similarity=0.126 Sum_probs=92.7
Q ss_pred CCCCCccCccCCceEEEEEeCCCCEEEEEEccccccc-------------ccHHHH--------HHHHHHHhcCCCCCcc
Q 013004 301 FSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTS-------------GGELQF--------QTEVKIISMAVHRNLL 359 (451)
Q Consensus 301 f~~~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~-------------~~~~~~--------~~E~~~l~~l~H~niv 359 (451)
|...+.||+|+||.||+|..++|+.||||+++..... ...... .+|...|.++.+..+.
T Consensus 97 Y~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~ 176 (397)
T 4gyi_A 97 YSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFP 176 (397)
T ss_dssp SEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred EEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 7778899999999999999989999999987543210 001112 2344455555433332
Q ss_pred ceeeEEecCCeeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCCceeeCCC
Q 013004 360 RLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDED 439 (451)
Q Consensus 360 ~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~NILld~~ 439 (451)
...-+.. ...++||||+++++|.+.... .....++.|++.+|.|||++ +||||||||.|||++++
T Consensus 177 vp~p~~~--~~~~LVME~i~G~~L~~l~~~----------~~~~~l~~qll~~l~~lH~~---gIVHrDLKp~NILl~~d 241 (397)
T 4gyi_A 177 VPEPIAQ--SRHTIVMSLVDALPMRQVSSV----------PDPASLYADLIALILRLAKH---GLIHGDFNEFNILIREE 241 (397)
T ss_dssp CCCEEEE--ETTEEEEECCSCEEGGGCCCC----------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEEEE
T ss_pred CCeeeec--cCceEEEEecCCccHhhhccc----------HHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeCC
Confidence 1111111 123799999999887654321 12356789999999999998 99999999999999988
Q ss_pred CC----------ccchhhhh
Q 013004 440 AD----------QSSKTILR 449 (451)
Q Consensus 440 ~~----------~~i~df~~ 449 (451)
++ +.|+||=+
T Consensus 242 gd~~d~~~~~~~~~iID~~Q 261 (397)
T 4gyi_A 242 KDAEDPSSITLTPIIIXFPQ 261 (397)
T ss_dssp ECSSCTTSEEEEEEECCCTT
T ss_pred CCcccccccccceEEEEeCC
Confidence 74 66777643
No 264
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.67 E-value=2.5e-16 Score=150.40 Aligned_cols=165 Identities=22% Similarity=0.147 Sum_probs=104.0
Q ss_pred eehhHHHhhhhcch-hhhhhhhhhhhhccCCCcceEE----------EeecCCccccccCCccccCCCCCCEEeCcCCcc
Q 013004 39 VTLKAVLQECEQLH-LLISFLIFIRVLQSSSNLFVYL----------ISDLGNAALSGELAPELGQLKNLELLELYGNNL 107 (451)
Q Consensus 39 ~~l~~~~~~~~~l~-~~~~~~~~~~~l~~~~n~~~~~----------~~~l~~n~~~g~~p~~l~~l~~L~~L~ls~N~l 107 (451)
..|....+.+..++ ..+..+..|+.|++++|.++.. .++|++|.++ .+|..+..+++|+.|++++|++
T Consensus 34 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l 112 (290)
T 1p9a_G 34 TILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVDGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRL 112 (290)
T ss_dssp CEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECCSCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCC
T ss_pred CEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCCCCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcC
Confidence 33444444444443 3456667777777777766543 3466666665 4666667777777777777777
Q ss_pred CccCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeeccccccCCCChhhhhcCCCCCeeccCCccccCcCCCCC
Q 013004 108 SGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPDNG 187 (451)
Q Consensus 108 ~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~~ 187 (451)
++..|..|..+++|+.|+|++|++++..|..|..+++|+.|+|++|++++..+..+..+++|+.|++++|+++..++...
T Consensus 113 ~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~ip~~~~ 192 (290)
T 1p9a_G 113 TSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYTIPKGFF 192 (290)
T ss_dssp CCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCCCCCTTTT
T ss_pred cccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCCccChhhc
Confidence 75555667777777777777777775555556677777777777777775555556667777777777777774433333
Q ss_pred CCCcccccccccccccC
Q 013004 188 SFSQFTPISFENNLNLC 204 (451)
Q Consensus 188 ~~~~~~~~~~~~n~~lC 204 (451)
....+..+.+.+|+-.|
T Consensus 193 ~~~~L~~l~L~~Np~~C 209 (290)
T 1p9a_G 193 GSHLLPFAFLHGNPWLC 209 (290)
T ss_dssp TTCCCSEEECCSCCBCC
T ss_pred ccccCCeEEeCCCCccC
Confidence 34445555556665444
No 265
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.67 E-value=2e-16 Score=144.69 Aligned_cols=130 Identities=18% Similarity=0.253 Sum_probs=107.6
Q ss_pred EeecCCccccccCCc-cccCCCCCCEEeCcCCccCccCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeecccc
Q 013004 75 ISDLGNAALSGELAP-ELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNN 153 (451)
Q Consensus 75 ~~~l~~n~~~g~~p~-~l~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N 153 (451)
.++|++|.+++..|. .++.+++|+.|+|++|++++..|..|..+++|+.|+|++|++++..|..|+.+++|++|+|++|
T Consensus 36 ~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 115 (220)
T 2v70_A 36 ELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSN 115 (220)
T ss_dssp EEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTS
T ss_pred EEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCC
Confidence 355666666665443 4788999999999999999877778999999999999999999777778999999999999999
Q ss_pred ccCCCChhhhhcCCCCCeeccCCccccCcCCCC-CCCCcccccccccccccC
Q 013004 154 SLSGLIPTSLTTITSLNILDLSNNRLSGPVPDN-GSFSQFTPISFENNLNLC 204 (451)
Q Consensus 154 ~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~-~~~~~~~~~~~~~n~~lC 204 (451)
++++..|..+..+++|+.|++++|++++..|.. ..+.++..+.+.+|+-.|
T Consensus 116 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c 167 (220)
T 2v70_A 116 RITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNC 167 (220)
T ss_dssp CCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEEC
T ss_pred cCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcC
Confidence 999888899999999999999999999886643 445667777777776555
No 266
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.66 E-value=5.4e-17 Score=145.30 Aligned_cols=110 Identities=28% Similarity=0.348 Sum_probs=97.1
Q ss_pred EeecCCccccccCCc-cccCCCCCCEEeCcCCccCccCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeecccc
Q 013004 75 ISDLGNAALSGELAP-ELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNN 153 (451)
Q Consensus 75 ~~~l~~n~~~g~~p~-~l~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N 153 (451)
.++|++|.+++..+. .++.+++|+.|+|++|++++..|..|..+++|+.|+|++|++++..|..|+.+++|++|+|++|
T Consensus 33 ~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 112 (192)
T 1w8a_A 33 ELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDN 112 (192)
T ss_dssp EEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEECCSS
T ss_pred EEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCC
Confidence 345666666654443 3889999999999999999888999999999999999999999888888999999999999999
Q ss_pred ccCCCChhhhhcCCCCCeeccCCccccCcCC
Q 013004 154 SLSGLIPTSLTTITSLNILDLSNNRLSGPVP 184 (451)
Q Consensus 154 ~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p 184 (451)
++++.+|..+..+++|+.|++++|++++..+
T Consensus 113 ~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 113 QISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred cCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 9999999999999999999999999998765
No 267
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.66 E-value=3.7e-17 Score=173.13 Aligned_cols=112 Identities=23% Similarity=0.413 Sum_probs=55.0
Q ss_pred CCcccc--CCCCCCEEeCcCCccCccCCccccCCCCCcEEeCCCCc-CCc-cCcccccCC------cccceeeccccccC
Q 013004 87 LAPELG--QLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNL-FNG-TIPDTLANL------KQLKYLRLNNNSLS 156 (451)
Q Consensus 87 ~p~~l~--~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~-l~g-~~p~~~~~l------~~L~~L~ls~N~l~ 156 (451)
+|++++ ++++|++|+|++|++.|.+|..++++++|+.|++++|+ ++| .+|..++++ ++|+.|++++|+++
T Consensus 239 ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~ 318 (636)
T 4eco_A 239 KTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK 318 (636)
T ss_dssp TTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS
T ss_pred CchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC
Confidence 444444 45555555555555444455445555555555555554 444 444444443 44555555555554
Q ss_pred CCChh--hhhcCCCCCeeccCCccccCcCCCCCCCCccccccccc
Q 013004 157 GLIPT--SLTTITSLNILDLSNNRLSGPVPDNGSFSQFTPISFEN 199 (451)
Q Consensus 157 ~~~p~--~~~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~ 199 (451)
.+|. .++.+++|+.|++++|.++|.+|..+.+..+..+.+.+
T Consensus 319 -~ip~~~~l~~l~~L~~L~L~~N~l~g~ip~~~~l~~L~~L~L~~ 362 (636)
T 4eco_A 319 -TFPVETSLQKMKKLGMLECLYNQLEGKLPAFGSEIKLASLNLAY 362 (636)
T ss_dssp -SCCCHHHHTTCTTCCEEECCSCCCEEECCCCEEEEEESEEECCS
T ss_pred -ccCchhhhccCCCCCEEeCcCCcCccchhhhCCCCCCCEEECCC
Confidence 4444 55555555555555555555555333333333333333
No 268
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.65 E-value=5.4e-16 Score=141.85 Aligned_cols=130 Identities=23% Similarity=0.310 Sum_probs=109.8
Q ss_pred EeecCCccccccCCccccCCCCCCEEeCcCCccCccCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeeccccc
Q 013004 75 ISDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNS 154 (451)
Q Consensus 75 ~~~l~~n~~~g~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~ 154 (451)
.++|++|.+++..+..+..+++|+.|+|++|++++..|..|..+++|+.|+|++|++++..+..|..+++|+.|+|++|+
T Consensus 36 ~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~ 115 (220)
T 2v9t_B 36 EIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANK 115 (220)
T ss_dssp EEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCC
Confidence 34555666665455678899999999999999998889999999999999999999995555557899999999999999
Q ss_pred cCCCChhhhhcCCCCCeeccCCccccCcCCC-CCCCCcccccccccccccC
Q 013004 155 LSGLIPTSLTTITSLNILDLSNNRLSGPVPD-NGSFSQFTPISFENNLNLC 204 (451)
Q Consensus 155 l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~-~~~~~~~~~~~~~~n~~lC 204 (451)
+++..|..+..+++|+.|++++|++++..+. ...+.++..+.+.+|+-.|
T Consensus 116 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 116 INCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCC
Confidence 9998899999999999999999999987765 3446677777788887665
No 269
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.65 E-value=1.2e-16 Score=153.51 Aligned_cols=167 Identities=20% Similarity=0.235 Sum_probs=105.6
Q ss_pred ceEEEeehhHHHhhhhcc---hhhhhhhhhhhhhccCCCcceEE-----------EeecCCccccccCC-ccccCCCCCC
Q 013004 34 GFTLLVTLKAVLQECEQL---HLLISFLIFIRVLQSSSNLFVYL-----------ISDLGNAALSGELA-PELGQLKNLE 98 (451)
Q Consensus 34 ~~~~~~~l~~~~~~~~~l---~~~~~~~~~~~~l~~~~n~~~~~-----------~~~l~~n~~~g~~p-~~l~~l~~L~ 98 (451)
++..|+.|....+.+..+ +..+..+..|+.|++++|.+... .+++++|.+++..+ ..+..+++|+
T Consensus 50 ~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~ 129 (306)
T 2z66_A 50 KLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLI 129 (306)
T ss_dssp TCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSCSEEEEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCC
T ss_pred ccccCCEEECCCCccCcccCcccccccccccCEEECCCCccccChhhcCCCCCCCEEECCCCcccccccchhhhhccCCC
Confidence 344444444443333333 34444566677777777765543 23555666665333 4567777777
Q ss_pred EEeCcCCccCccCCccccCCCCCcEEeCCCCcCCc-cCcccccCCcccceeeccccccCCCChhhhhcCCCCCeeccCCc
Q 013004 99 LLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNG-TIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSNN 177 (451)
Q Consensus 99 ~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g-~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N 177 (451)
.|++++|.+++..|..+..+++|+.|++++|.+++ .+|..++.+++|+.|++++|++++..|..+..+++|+.|++++|
T Consensus 130 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N 209 (306)
T 2z66_A 130 YLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHN 209 (306)
T ss_dssp EEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTS
T ss_pred EEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCC
Confidence 77777777776677777777777777777777765 46667777777777777777777666777777777777777777
Q ss_pred cccCcCCC-CCCCCcccccccccc
Q 013004 178 RLSGPVPD-NGSFSQFTPISFENN 200 (451)
Q Consensus 178 ~l~~~~p~-~~~~~~~~~~~~~~n 200 (451)
.+++..+. ...+.++..+.+.+|
T Consensus 210 ~l~~~~~~~~~~l~~L~~L~L~~N 233 (306)
T 2z66_A 210 NFFSLDTFPYKCLNSLQVLDYSLN 233 (306)
T ss_dssp CCSBCCSGGGTTCTTCCEEECTTS
T ss_pred ccCccChhhccCcccCCEeECCCC
Confidence 77765442 233455555555555
No 270
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.65 E-value=8e-17 Score=153.18 Aligned_cols=164 Identities=21% Similarity=0.191 Sum_probs=129.6
Q ss_pred EEeehhHHHhhhhcchh-hhhhhhhhhhhccCCCcceEE------------EeecCCcc-ccccCCccccCCCCCCEEeC
Q 013004 37 LLVTLKAVLQECEQLHL-LISFLIFIRVLQSSSNLFVYL------------ISDLGNAA-LSGELAPELGQLKNLELLEL 102 (451)
Q Consensus 37 ~~~~l~~~~~~~~~l~~-~~~~~~~~~~l~~~~n~~~~~------------~~~l~~n~-~~g~~p~~l~~l~~L~~L~l 102 (451)
.++.|....+.+..++. .++.+..|+.|++++|.+... .++|++|. +....|..+..+++|+.|++
T Consensus 33 ~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l 112 (285)
T 1ozn_A 33 ASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHL 112 (285)
T ss_dssp TCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEEC
T ss_pred CceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEEC
Confidence 34455555556666664 467788899999998876543 46788887 65545778889999999999
Q ss_pred cCCccCccCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeeccccccCCCChhhhhcCCCCCeeccCCccccCc
Q 013004 103 YGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSNNRLSGP 182 (451)
Q Consensus 103 s~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~ 182 (451)
++|.+++..|..+..+++|+.|++++|++++..+..++.+++|+.|++++|++++..+..+..+++|+.|++++|.+++.
T Consensus 113 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 192 (285)
T 1ozn_A 113 DRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHV 192 (285)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEE
T ss_pred CCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCccccc
Confidence 99999988788899999999999999999866666788999999999999999877667788899999999999999887
Q ss_pred CCCC-CCCCcccccccccc
Q 013004 183 VPDN-GSFSQFTPISFENN 200 (451)
Q Consensus 183 ~p~~-~~~~~~~~~~~~~n 200 (451)
.|.. ..+..+..+.+.+|
T Consensus 193 ~~~~~~~l~~L~~L~l~~n 211 (285)
T 1ozn_A 193 HPHAFRDLGRLMTLYLFAN 211 (285)
T ss_dssp CTTTTTTCTTCCEEECCSS
T ss_pred CHhHccCcccccEeeCCCC
Confidence 6643 34566666666666
No 271
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.65 E-value=4.3e-16 Score=147.03 Aligned_cols=124 Identities=28% Similarity=0.372 Sum_probs=65.1
Q ss_pred eecCCccccccCCcc-ccCCCCCCEEeCcCCccCccCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeeccccc
Q 013004 76 SDLGNAALSGELAPE-LGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNS 154 (451)
Q Consensus 76 ~~l~~n~~~g~~p~~-l~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~ 154 (451)
++|++|.++. +|+. +..+++|++|++++|++++..+..+..+++|+.|++++|++++..|..|+.+++|++|+|++|.
T Consensus 66 L~l~~n~l~~-i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~ 144 (270)
T 2o6q_A 66 LYLNDNKLQT-LPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNE 144 (270)
T ss_dssp EECCSSCCSC-CCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EECCCCccCe-eChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCc
Confidence 3444444443 3332 3455666666666666654444445555666666666666654444455555666666666666
Q ss_pred cCCCChhhhhcCCCCCeeccCCccccCcCCC-CCCCCcccccccccc
Q 013004 155 LSGLIPTSLTTITSLNILDLSNNRLSGPVPD-NGSFSQFTPISFENN 200 (451)
Q Consensus 155 l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~-~~~~~~~~~~~~~~n 200 (451)
+++..+..+..+++|+.|++++|.+++..+. ...+.++..+.+.+|
T Consensus 145 l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N 191 (270)
T 2o6q_A 145 LQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNN 191 (270)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSS
T ss_pred CCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCC
Confidence 6554444455555666666666655554432 223344444444444
No 272
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.64 E-value=3.5e-16 Score=143.10 Aligned_cols=125 Identities=22% Similarity=0.265 Sum_probs=110.0
Q ss_pred hhhhhccCCCcceEE-------------EeecCCccccccCCccccCCCCCCEEeCcCCccCccCCccccCCCCCcEEeC
Q 013004 60 FIRVLQSSSNLFVYL-------------ISDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDL 126 (451)
Q Consensus 60 ~~~~l~~~~n~~~~~-------------~~~l~~n~~~g~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l 126 (451)
.++.|++++|.+... .++|++|.+++..|..++.+++|+.|+|++|++++..|..|..+++|+.|+|
T Consensus 33 ~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 112 (220)
T 2v70_A 33 YTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLML 112 (220)
T ss_dssp TCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEEC
T ss_pred CCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEEC
Confidence 346677777766543 3567788888766778999999999999999999888888999999999999
Q ss_pred CCCcCCccCcccccCCcccceeeccccccCCCChhhhhcCCCCCeeccCCccccCcCC
Q 013004 127 YSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVP 184 (451)
Q Consensus 127 s~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p 184 (451)
++|++++..|..|..+++|+.|+|++|++++..|..+..+++|+.|++++|++++..+
T Consensus 113 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 113 RSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp TTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred CCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 9999998889999999999999999999999889999999999999999999997654
No 273
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.63 E-value=1.5e-16 Score=167.35 Aligned_cols=170 Identities=19% Similarity=0.181 Sum_probs=102.2
Q ss_pred EEEeehhHHHhhhhcchhhhhhhhhhhhhccCCCcceE-------------EEeecCCccccccCCccccCCCCCCEEeC
Q 013004 36 TLLVTLKAVLQECEQLHLLISFLIFIRVLQSSSNLFVY-------------LISDLGNAALSGELAPELGQLKNLELLEL 102 (451)
Q Consensus 36 ~~~~~l~~~~~~~~~l~~~~~~~~~~~~l~~~~n~~~~-------------~~~~l~~n~~~g~~p~~l~~l~~L~~L~l 102 (451)
..|+.|....+.+..+|..+..+..|+.|++++|.+.. ..+++++|.+++..|..++.+++|+.|++
T Consensus 376 ~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 455 (606)
T 3vq2_A 376 NSLRHLDLSFNGAIIMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKM 455 (606)
T ss_dssp SCCCEEECCSCSEEEECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEEC
T ss_pred CcccEeECCCCccccchhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEEC
Confidence 33444443434444445445555666666666554432 23456666666666666666667777777
Q ss_pred cCCccCc-cCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeeccccccCCCChhhhhcCCCCCeeccCCccccC
Q 013004 103 YGNNLSG-HIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSNNRLSG 181 (451)
Q Consensus 103 s~N~l~~-~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~ 181 (451)
++|.+++ .+|..++.+++|+.|++++|++++..|..++++++|+.|++++|++++.+|..+..+++|+.||+++|+++.
T Consensus 456 ~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 535 (606)
T 3vq2_A 456 AGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIET 535 (606)
T ss_dssp TTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCCC
T ss_pred CCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCcc
Confidence 7776665 356666667777777777777766666666667777777777777766666666667777777777777664
Q ss_pred cCCCCCCCC-cccccccccccccCC
Q 013004 182 PVPDNGSFS-QFTPISFENNLNLCG 205 (451)
Q Consensus 182 ~~p~~~~~~-~~~~~~~~~n~~lCg 205 (451)
.++....+. ++..+.+.+|+..|.
T Consensus 536 ~p~~~~~l~~~L~~l~l~~N~~~c~ 560 (606)
T 3vq2_A 536 SKGILQHFPKSLAFFNLTNNSVACI 560 (606)
T ss_dssp EESCGGGSCTTCCEEECCSCCCCCS
T ss_pred cCHhHhhhcccCcEEEccCCCcccC
Confidence 333222232 355555666655553
No 274
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.63 E-value=5.3e-16 Score=146.60 Aligned_cols=152 Identities=22% Similarity=0.189 Sum_probs=129.6
Q ss_pred cceEEEeehhHHHhhhhcchhhhhhhhhhhhhccCCCcceE------------EEeecCCccccccCCccccCCCCCCEE
Q 013004 33 RGFTLLVTLKAVLQECEQLHLLISFLIFIRVLQSSSNLFVY------------LISDLGNAALSGELAPELGQLKNLELL 100 (451)
Q Consensus 33 ~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~l~~~~n~~~~------------~~~~l~~n~~~g~~p~~l~~l~~L~~L 100 (451)
..+..++.|....+.+..++ .++.+..|+.|++++|.+.. ..++|++|.+++..|..++.+++|+.|
T Consensus 60 ~~l~~L~~L~l~~n~l~~~~-~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 138 (272)
T 3rfs_A 60 QYLPNVRYLALGGNKLHDIS-ALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYL 138 (272)
T ss_dssp GGCTTCCEEECTTSCCCCCG-GGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEE
T ss_pred ccCCCCcEEECCCCCCCCch-hhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEE
Confidence 34556666666666666654 56778899999999887653 356888999997666678999999999
Q ss_pred eCcCCccCccCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeeccccccCCCChhhhhcCCCCCeeccCCcccc
Q 013004 101 ELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSNNRLS 180 (451)
Q Consensus 101 ~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~ 180 (451)
++++|++++..|..++.+++|+.|++++|++++..|..++.+++|+.|++++|++++..|..+..+++|+.|++++|+++
T Consensus 139 ~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 218 (272)
T 3rfs_A 139 NLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWD 218 (272)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred ECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcc
Confidence 99999999877777899999999999999999777777899999999999999999988888999999999999999999
Q ss_pred CcCCC
Q 013004 181 GPVPD 185 (451)
Q Consensus 181 ~~~p~ 185 (451)
+..|.
T Consensus 219 ~~~~~ 223 (272)
T 3rfs_A 219 CTCPG 223 (272)
T ss_dssp CCTTT
T ss_pred ccCcH
Confidence 88774
No 275
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.62 E-value=2.7e-15 Score=138.09 Aligned_cols=129 Identities=25% Similarity=0.230 Sum_probs=106.2
Q ss_pred EeecCCccccccCCccccCCCCCCEEeCcCCccCccCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeeccccc
Q 013004 75 ISDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNS 154 (451)
Q Consensus 75 ~~~l~~n~~~g~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~ 154 (451)
.++|++|.+++..|..+..+++|+.|+|++|++++..+..+..+++|+.|+|++|++++..+..|..+++|+.|+|++|+
T Consensus 44 ~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~ 123 (229)
T 3e6j_A 44 ILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNK 123 (229)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCc
Confidence 34566666777678888999999999999999986556667999999999999999996666678899999999999999
Q ss_pred cCCCChhhhhcCCCCCeeccCCccccCcCCC-CCCCCcccccccccccccC
Q 013004 155 LSGLIPTSLTTITSLNILDLSNNRLSGPVPD-NGSFSQFTPISFENNLNLC 204 (451)
Q Consensus 155 l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~-~~~~~~~~~~~~~~n~~lC 204 (451)
++ .+|..+..+++|+.|++++|++++..+. ...+.++..+.+.+|+..|
T Consensus 124 l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 173 (229)
T 3e6j_A 124 LT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDC 173 (229)
T ss_dssp CC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCT
T ss_pred cc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccC
Confidence 98 6788899999999999999999976653 3445667777777776554
No 276
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.62 E-value=1.3e-16 Score=163.57 Aligned_cols=162 Identities=23% Similarity=0.161 Sum_probs=106.4
Q ss_pred cceEEEeehhHHHhhhhcchhhhhhhhhhhhhccCCCcceEEE-------eecCCccccccCCccccCCCCCCEEeCcCC
Q 013004 33 RGFTLLVTLKAVLQECEQLHLLISFLIFIRVLQSSSNLFVYLI-------SDLGNAALSGELAPELGQLKNLELLELYGN 105 (451)
Q Consensus 33 ~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~l~~~~n~~~~~~-------~~l~~n~~~g~~p~~l~~l~~L~~L~ls~N 105 (451)
.+++.|..|....+.+..+++ ++.++.|+.|++++|.+...+ +++++|.+++..+. .+++|+.|+|++|
T Consensus 55 ~~l~~L~~L~Ls~N~l~~~~~-l~~l~~L~~L~Ls~N~l~~l~~~~~L~~L~L~~N~l~~~~~~---~l~~L~~L~L~~N 130 (487)
T 3oja_A 55 APFTKLELLNLSSNVLYETLD-LESLSTLRTLDLNNNYVQELLVGPSIETLHAANNNISRVSCS---RGQGKKNIYLANN 130 (487)
T ss_dssp TTCTTCCEEECTTSCCEEEEE-CTTCTTCCEEECCSSEEEEEEECTTCCEEECCSSCCCCEEEC---CCSSCEEEECCSS
T ss_pred hCCCCCCEEEeeCCCCCCCcc-cccCCCCCEEEecCCcCCCCCCCCCcCEEECcCCcCCCCCcc---ccCCCCEEECCCC
Confidence 345556666666666655555 677778888888888776533 45666666654332 3566777777777
Q ss_pred ccCccCCccccCCCCCcEEeCCCCcCCccCccccc-CCcccceeeccccccCCCChhhhhcCCCCCeeccCCccccCcCC
Q 013004 106 NLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLA-NLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVP 184 (451)
Q Consensus 106 ~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~-~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p 184 (451)
.+++..|..++.+++|+.|+|++|.+++.+|..+. .+++|+.|+|++|.+++. |. ...+++|+.|++++|.+++.+|
T Consensus 131 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~~~~ 208 (487)
T 3oja_A 131 KITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAFMGP 208 (487)
T ss_dssp CCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECCSSCCCEECG
T ss_pred CCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc-cc-cccCCCCCEEECCCCCCCCCCH
Confidence 77776677777777777777777777766666665 577777777777777654 22 3346677777777777777666
Q ss_pred CCCCCCcccccccccc
Q 013004 185 DNGSFSQFTPISFENN 200 (451)
Q Consensus 185 ~~~~~~~~~~~~~~~n 200 (451)
....+..+..+.+.+|
T Consensus 209 ~~~~l~~L~~L~Ls~N 224 (487)
T 3oja_A 209 EFQSAAGVTWISLRNN 224 (487)
T ss_dssp GGGGGTTCSEEECTTS
T ss_pred hHcCCCCccEEEecCC
Confidence 5545555555555555
No 277
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.62 E-value=1.2e-15 Score=154.66 Aligned_cols=133 Identities=23% Similarity=0.272 Sum_probs=115.0
Q ss_pred EEEeecCCccccccCCccccCCCCCCEEeCcCCccCccCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeeccc
Q 013004 73 YLISDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNN 152 (451)
Q Consensus 73 ~~~~~l~~n~~~g~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~ 152 (451)
+..+++++|.+++..|..++.+++|+.|++++|++++..|..+..+++|+.|+|++|.+++..|..++.+++|+.|+|++
T Consensus 277 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 356 (455)
T 3v47_A 277 VKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSY 356 (455)
T ss_dssp CCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCS
T ss_pred ceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCC
Confidence 45678888888888888899999999999999999988888999999999999999999887888899999999999999
Q ss_pred cccCCCChhhhhcCCCCCeeccCCccccCcCCCC-CCCCcccccccccccccCC
Q 013004 153 NSLSGLIPTSLTTITSLNILDLSNNRLSGPVPDN-GSFSQFTPISFENNLNLCG 205 (451)
Q Consensus 153 N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~-~~~~~~~~~~~~~n~~lCg 205 (451)
|++++..|..+..+++|+.|++++|++++.++.. ..+.+++.+.+.+|+-.|.
T Consensus 357 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 410 (455)
T 3v47_A 357 NHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 410 (455)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred CcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccC
Confidence 9999888889999999999999999999866543 4567778888888876654
No 278
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.61 E-value=1.9e-15 Score=138.27 Aligned_cols=124 Identities=23% Similarity=0.298 Sum_probs=107.7
Q ss_pred hhhhhhccCCCcceE------------EEeecCCccccccCCccccCCCCCCEEeCcCCccCccCCccccCCCCCcEEeC
Q 013004 59 IFIRVLQSSSNLFVY------------LISDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDL 126 (451)
Q Consensus 59 ~~~~~l~~~~n~~~~------------~~~~l~~n~~~g~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l 126 (451)
..++.|++++|.+.. ..++|++|.+++..|..+..+++|+.|+|++|++++..+..|..+++|+.|+|
T Consensus 32 ~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L 111 (220)
T 2v9t_B 32 ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLL 111 (220)
T ss_dssp TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEEC
Confidence 356666777666543 34677888888878999999999999999999999655566799999999999
Q ss_pred CCCcCCccCcccccCCcccceeeccccccCCCChhhhhcCCCCCeeccCCccccCc
Q 013004 127 YSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSNNRLSGP 182 (451)
Q Consensus 127 s~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~ 182 (451)
++|++++..|..|..+++|+.|+|++|++++..+..+..+++|+.|++++|++...
T Consensus 112 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 167 (220)
T 2v9t_B 112 NANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICD 167 (220)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred CCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCC
Confidence 99999988899999999999999999999988888899999999999999999753
No 279
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.60 E-value=2.5e-15 Score=134.40 Aligned_cols=126 Identities=21% Similarity=0.348 Sum_probs=106.6
Q ss_pred eecCCccccccCCccccCCCCCCEEeCcCCccCccCCc-cccCCCCCcEEeCCCCcCCccCcccccCCcccceeeccccc
Q 013004 76 SDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPS-ALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNS 154 (451)
Q Consensus 76 ~~l~~n~~~g~~p~~l~~l~~L~~L~ls~N~l~~~~p~-~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~ 154 (451)
+++++|.+ +.+|..+.. +|+.|++++|++++..|. .++.+++|+.|+|++|++++..|..|+++++|+.|+|++|+
T Consensus 13 l~~s~~~l-~~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 89 (192)
T 1w8a_A 13 VDCTGRGL-KEIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENK 89 (192)
T ss_dssp EECTTSCC-SSCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCC
T ss_pred EEcCCCCc-CcCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCc
Confidence 45666666 368887754 999999999999966664 48999999999999999998889999999999999999999
Q ss_pred cCCCChhhhhcCCCCCeeccCCccccCcCCCC-CCCCcccccccccccccC
Q 013004 155 LSGLIPTSLTTITSLNILDLSNNRLSGPVPDN-GSFSQFTPISFENNLNLC 204 (451)
Q Consensus 155 l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~-~~~~~~~~~~~~~n~~lC 204 (451)
+++..|..+..+++|+.|++++|++++.+|.. ..+.++..+.+.+|+-.|
T Consensus 90 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c 140 (192)
T 1w8a_A 90 IKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNC 140 (192)
T ss_dssp CCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCC
T ss_pred CCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccC
Confidence 99988888999999999999999999987753 445667777777775444
No 280
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.60 E-value=4.4e-15 Score=138.48 Aligned_cols=128 Identities=23% Similarity=0.262 Sum_probs=111.7
Q ss_pred EEeecCCccccccCCccccCCCCCCEEeCcCCccCccCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeecccc
Q 013004 74 LISDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNN 153 (451)
Q Consensus 74 ~~~~l~~n~~~g~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N 153 (451)
..++|++|.+++..|..++.+++|++|+|++|.+++..|..+..+++|+.|+|++|++++..|..++.+++|++|+|++|
T Consensus 38 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N 117 (251)
T 3m19_A 38 EKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGN 117 (251)
T ss_dssp CEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCC
Confidence 34567777788777778999999999999999999888888999999999999999999777778899999999999999
Q ss_pred ccCCCChhhhhcCCCCCeeccCCccccCcCCC-CCCCCccccccccccc
Q 013004 154 SLSGLIPTSLTTITSLNILDLSNNRLSGPVPD-NGSFSQFTPISFENNL 201 (451)
Q Consensus 154 ~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~-~~~~~~~~~~~~~~n~ 201 (451)
++++..+..+..+++|+.|++++|.+++.++. ...+.++..+.+.+|.
T Consensus 118 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~ 166 (251)
T 3m19_A 118 QLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQ 166 (251)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred cCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCc
Confidence 99987777789999999999999999987773 4556777777777773
No 281
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.60 E-value=7.1e-15 Score=132.96 Aligned_cols=129 Identities=26% Similarity=0.283 Sum_probs=97.2
Q ss_pred eecCCccccccCCccccCCCCCCEEeCcCCccCccCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeecccccc
Q 013004 76 SDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSL 155 (451)
Q Consensus 76 ~~l~~n~~~g~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l 155 (451)
++|++|.+++..+..++.+++|+.|++++|++++..+..+..+++|++|++++|++++..+..++.+++|++|++++|++
T Consensus 33 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l 112 (208)
T 2o6s_A 33 LDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQL 112 (208)
T ss_dssp EECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred EEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcC
Confidence 44555555543444567888889999988888866666678888899999998888865556678888889999998888
Q ss_pred CCCChhhhhcCCCCCeeccCCccccCcCCC-CCCCCcccccccccccccC
Q 013004 156 SGLIPTSLTTITSLNILDLSNNRLSGPVPD-NGSFSQFTPISFENNLNLC 204 (451)
Q Consensus 156 ~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~-~~~~~~~~~~~~~~n~~lC 204 (451)
++..+..+..+++|+.|++++|.+++.++. ...+.++..+.+.+|+..|
T Consensus 113 ~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 162 (208)
T 2o6s_A 113 QSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC 162 (208)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC
T ss_pred cccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeec
Confidence 877666788888888899988888876654 3446667777777775544
No 282
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.59 E-value=5.4e-16 Score=168.28 Aligned_cols=118 Identities=19% Similarity=0.303 Sum_probs=67.9
Q ss_pred ccccccCCccccCCCCCCEEeCcCCccCc-----------------cCCcccc--CCCCCcEEeCCCCcCCccCcccccC
Q 013004 81 AALSGELAPELGQLKNLELLELYGNNLSG-----------------HIPSALG--NLIKLKSLDLYSNLFNGTIPDTLAN 141 (451)
Q Consensus 81 n~~~g~~p~~l~~l~~L~~L~ls~N~l~~-----------------~~p~~~~--~l~~L~~L~ls~N~l~g~~p~~~~~ 141 (451)
|.++| +|+++++|++|+.|+|++|+++| .+|+.++ ++++|+.|+|++|++.|.+|..+++
T Consensus 435 N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~ 513 (876)
T 4ecn_A 435 NRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYD 513 (876)
T ss_dssp CEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGG
T ss_pred Ccccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhC
Confidence 45555 66666666666666666666665 2666655 6666666666666666666666666
Q ss_pred Ccccceeeccccc-cCC-CChhhhhcCC-------CCCeeccCCccccCcCCC---CCCCCcccccccccc
Q 013004 142 LKQLKYLRLNNNS-LSG-LIPTSLTTIT-------SLNILDLSNNRLSGPVPD---NGSFSQFTPISFENN 200 (451)
Q Consensus 142 l~~L~~L~ls~N~-l~~-~~p~~~~~l~-------~L~~l~ls~N~l~~~~p~---~~~~~~~~~~~~~~n 200 (451)
+++|+.|+|++|+ ++| .+|..++.++ +|+.|++++|.++ .+|. .+.+.++..+.+.+|
T Consensus 514 L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N 583 (876)
T 4ecn_A 514 LPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHN 583 (876)
T ss_dssp CSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTS
T ss_pred CCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCC
Confidence 6666666666665 555 5555554443 5555555555555 4443 333444444444443
No 283
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.59 E-value=1.2e-15 Score=154.16 Aligned_cols=128 Identities=27% Similarity=0.348 Sum_probs=97.7
Q ss_pred ecCCccccccCCc-cccCCCCCCEEeCcCCccCccCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeecccccc
Q 013004 77 DLGNAALSGELAP-ELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSL 155 (451)
Q Consensus 77 ~l~~n~~~g~~p~-~l~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l 155 (451)
+|++|...+.+|+ .+..+++|+.|+|++|+++ .+| .+..+++|+.|+|++|++++..|..|.++++|+.|+|++|++
T Consensus 166 ~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l 243 (440)
T 3zyj_A 166 DLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQI 243 (440)
T ss_dssp ECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred CCCCCCCcceeCcchhhcccccCeecCCCCcCc-ccc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCce
Confidence 3444333333443 4667778888888888887 555 477888888888888888877788888899999999999999
Q ss_pred CCCChhhhhcCCCCCeeccCCccccCcCCCC-CCCCcccccccccccccCCC
Q 013004 156 SGLIPTSLTTITSLNILDLSNNRLSGPVPDN-GSFSQFTPISFENNLNLCGP 206 (451)
Q Consensus 156 ~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~-~~~~~~~~~~~~~n~~lCg~ 206 (451)
++..|..+..+++|+.||+++|++++.++.. ..+..+..+.+.+|+-.|..
T Consensus 244 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC 295 (440)
T 3zyj_A 244 QVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCNC 295 (440)
T ss_dssp CEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEECSS
T ss_pred eEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccCCC
Confidence 8888888888999999999999998766653 34667777788888877643
No 284
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.59 E-value=8e-15 Score=131.22 Aligned_cols=115 Identities=25% Similarity=0.369 Sum_probs=63.9
Q ss_pred CCccccCCCCCCEEeCcCCccCccCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeeccccccCCCChhhhhcC
Q 013004 87 LAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTI 166 (451)
Q Consensus 87 ~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l 166 (451)
+|..+. .+|+.|+|++|+++ .+|..+..+++|+.|+|++|++++..|..|.++++|+.|+|++|++++..|..|..+
T Consensus 25 ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l 101 (193)
T 2wfh_A 25 LPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGL 101 (193)
T ss_dssp CCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTC
T ss_pred CCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCC
Confidence 444432 35566666666665 555556666666666666666665445556666666666666666665555556666
Q ss_pred CCCCeeccCCccccCcCCC-CCCCCcccccccccccccC
Q 013004 167 TSLNILDLSNNRLSGPVPD-NGSFSQFTPISFENNLNLC 204 (451)
Q Consensus 167 ~~L~~l~ls~N~l~~~~p~-~~~~~~~~~~~~~~n~~lC 204 (451)
++|+.|++++|.+++.++. ...+..+..+.+.+|+-.|
T Consensus 102 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 102 KSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp TTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 6666666666666544432 2234444445555554433
No 285
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.58 E-value=2.5e-15 Score=134.59 Aligned_cols=107 Identities=25% Similarity=0.326 Sum_probs=96.0
Q ss_pred EeecCCccccccCCccccCCCCCCEEeCcCCccCccCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeeccccc
Q 013004 75 ISDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNS 154 (451)
Q Consensus 75 ~~~l~~n~~~g~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~ 154 (451)
.++|++|.++ .+|..+..+++|+.|+|++|.+++..|..|..+++|+.|+|++|++++..|..|..+++|+.|+|++|+
T Consensus 35 ~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~ 113 (193)
T 2wfh_A 35 ELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGND 113 (193)
T ss_dssp EEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSC
T ss_pred EEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECCCCC
Confidence 3455566665 688899999999999999999998888889999999999999999998888889999999999999999
Q ss_pred cCCCChhhhhcCCCCCeeccCCccccCc
Q 013004 155 LSGLIPTSLTTITSLNILDLSNNRLSGP 182 (451)
Q Consensus 155 l~~~~p~~~~~l~~L~~l~ls~N~l~~~ 182 (451)
+++..+..+..+++|+.|++++|++...
T Consensus 114 l~~~~~~~~~~l~~L~~L~L~~N~~~C~ 141 (193)
T 2wfh_A 114 ISVVPEGAFNDLSALSHLAIGANPLYCD 141 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred CCeeChhhhhcCccccEEEeCCCCeecC
Confidence 9987777899999999999999999864
No 286
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.57 E-value=5.6e-15 Score=140.38 Aligned_cols=144 Identities=23% Similarity=0.218 Sum_probs=121.8
Q ss_pred hhhhhhhccCCCcceEE------------EeecCCccccccCCccccCCCCCCEEeCcCCc-cCccCCccccCCCCCcEE
Q 013004 58 LIFIRVLQSSSNLFVYL------------ISDLGNAALSGELAPELGQLKNLELLELYGNN-LSGHIPSALGNLIKLKSL 124 (451)
Q Consensus 58 ~~~~~~l~~~~n~~~~~------------~~~l~~n~~~g~~p~~l~~l~~L~~L~ls~N~-l~~~~p~~~~~l~~L~~L 124 (451)
...++.|++++|.+... .++|++|.+++..|..++.+++|+.|++++|. ++...|..+..+++|+.|
T Consensus 31 ~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L 110 (285)
T 1ozn_A 31 PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTL 110 (285)
T ss_dssp CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEE
T ss_pred CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEE
Confidence 35678888888876543 46788999998778899999999999999997 876668889999999999
Q ss_pred eCCCCcCCccCcccccCCcccceeeccccccCCCChhhhhcCCCCCeeccCCccccCcCCC-CCCCCccccccccccc
Q 013004 125 DLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPD-NGSFSQFTPISFENNL 201 (451)
Q Consensus 125 ~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~-~~~~~~~~~~~~~~n~ 201 (451)
++++|.+++..|..+.++++|++|++++|++++..+..++.+++|+.|++++|.+++..+. ...+..++.+.+.+|.
T Consensus 111 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 188 (285)
T 1ozn_A 111 HLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNR 188 (285)
T ss_dssp ECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred ECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCc
Confidence 9999999987788899999999999999999987777899999999999999999976664 4456677777777663
No 287
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.57 E-value=3.3e-15 Score=141.24 Aligned_cols=163 Identities=21% Similarity=0.232 Sum_probs=91.5
Q ss_pred EeehhHHHhhhhcchh-hhhhhhhhhhhccCCCcceEE------------EeecCCccccccCCccccCCCCCCEEeCcC
Q 013004 38 LVTLKAVLQECEQLHL-LISFLIFIRVLQSSSNLFVYL------------ISDLGNAALSGELAPELGQLKNLELLELYG 104 (451)
Q Consensus 38 ~~~l~~~~~~~~~l~~-~~~~~~~~~~l~~~~n~~~~~------------~~~l~~n~~~g~~p~~l~~l~~L~~L~ls~ 104 (451)
++.|....+.+..++. .+..+..|+.|++++|.+... .++|++|.+++..|..+..+++|+.|++++
T Consensus 30 l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~ 109 (276)
T 2z62_A 30 TKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVE 109 (276)
T ss_dssp CCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTT
T ss_pred ccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCC
Confidence 4444445555555554 456666777777777655432 345555666555555566666666666666
Q ss_pred CccCccCCccccCCCCCcEEeCCCCcCCc-cCcccccCCcccceeeccccccCCCChhhhhcCCCCC----eeccCCccc
Q 013004 105 NNLSGHIPSALGNLIKLKSLDLYSNLFNG-TIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLN----ILDLSNNRL 179 (451)
Q Consensus 105 N~l~~~~p~~~~~l~~L~~L~ls~N~l~g-~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~----~l~ls~N~l 179 (451)
|++++..+..++.+++|+.|++++|.+++ .+|..++++++|+.|++++|++++..+..+..+.+|+ .|++++|.+
T Consensus 110 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l 189 (276)
T 2z62_A 110 TNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPM 189 (276)
T ss_dssp SCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSCC
T ss_pred CCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCcc
Confidence 66665444456666666666666666654 2455666666666666666666655555555444444 556666666
Q ss_pred cCcCCCCCCCCcccccccccc
Q 013004 180 SGPVPDNGSFSQFTPISFENN 200 (451)
Q Consensus 180 ~~~~p~~~~~~~~~~~~~~~n 200 (451)
++..+......++..+.+.+|
T Consensus 190 ~~~~~~~~~~~~L~~L~L~~n 210 (276)
T 2z62_A 190 NFIQPGAFKEIRLKELALDTN 210 (276)
T ss_dssp CEECTTSSCSCCEEEEECCSS
T ss_pred cccCccccCCCcccEEECCCC
Confidence 554444333334444444444
No 288
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.57 E-value=3.7e-15 Score=134.83 Aligned_cols=111 Identities=27% Similarity=0.308 Sum_probs=94.8
Q ss_pred EeecCCccccccCCccccCCCCCCEEeCcCCccCccCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeeccccc
Q 013004 75 ISDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNS 154 (451)
Q Consensus 75 ~~~l~~n~~~g~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~ 154 (451)
.++|++|.+++..+..+..+++|++|++++|++++..+..+..+++|+.|++++|++++..+..+..+++|+.|++++|+
T Consensus 56 ~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 135 (208)
T 2o6s_A 56 QLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQ 135 (208)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCc
Confidence 44566666665444456899999999999999997766778999999999999999997666678999999999999999
Q ss_pred cCCCChhhhhcCCCCCeeccCCccccCcCCC
Q 013004 155 LSGLIPTSLTTITSLNILDLSNNRLSGPVPD 185 (451)
Q Consensus 155 l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~ 185 (451)
+++..+..+..+++|+.|++++|.+.+..|.
T Consensus 136 l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 166 (208)
T 2o6s_A 136 LKSVPDGVFDRLTSLQYIWLHDNPWDCTCPG 166 (208)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSCCBCCCTTT
T ss_pred cceeCHHHhccCCCccEEEecCCCeecCCCC
Confidence 9987777789999999999999999887664
No 289
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.57 E-value=5.9e-15 Score=135.77 Aligned_cols=125 Identities=22% Similarity=0.241 Sum_probs=105.6
Q ss_pred hhhhhhccCCCcceE------------EEeecCCccccccCCccccCCCCCCEEeCcCCccCccCCccccCCCCCcEEeC
Q 013004 59 IFIRVLQSSSNLFVY------------LISDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDL 126 (451)
Q Consensus 59 ~~~~~l~~~~n~~~~------------~~~~l~~n~~~g~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l 126 (451)
..++.|++++|.+.. ..++|++|.+++..+..+..+++|+.|+|++|++++..+..+..+++|+.|+|
T Consensus 40 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L 119 (229)
T 3e6j_A 40 TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFM 119 (229)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEec
Confidence 456666666665543 34577778876433445689999999999999999777777899999999999
Q ss_pred CCCcCCccCcccccCCcccceeeccccccCCCChhhhhcCCCCCeeccCCccccCcCC
Q 013004 127 YSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVP 184 (451)
Q Consensus 127 s~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p 184 (451)
++|+++ .+|..+..+++|+.|+|++|++++..+..+..+++|+.|++++|++++..+
T Consensus 120 s~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 120 CCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp CSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred cCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 999999 899999999999999999999998777889999999999999999987665
No 290
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.57 E-value=1e-15 Score=137.39 Aligned_cols=122 Identities=18% Similarity=0.235 Sum_probs=90.7
Q ss_pred eecCCccccccCCccccCCCCCCEEeCcCCccCccCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeecccccc
Q 013004 76 SDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSL 155 (451)
Q Consensus 76 ~~l~~n~~~g~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l 155 (451)
+++++|.+ ..++.+..+++|+.|++++|.+++..|..++.+++|+.|++++|++++..|..++.+++|+.|++++|.+
T Consensus 71 L~l~~n~~--~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~ 148 (197)
T 4ezg_A 71 LTINNIHA--TNYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGA 148 (197)
T ss_dssp EEEESCCC--SCCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTB
T ss_pred EEccCCCC--CcchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEccCCCC
Confidence 34444433 2355778888888888888888877788888888888888888888877788888888888888888873
Q ss_pred CCCChhhhhcCCCCCeeccCCccccCcCCCCCCCCccccccccccc
Q 013004 156 SGLIPTSLTTITSLNILDLSNNRLSGPVPDNGSFSQFTPISFENNL 201 (451)
Q Consensus 156 ~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~ 201 (451)
.+.+| .+..+++|+.|++++|.+++. +....+..++.+.+.+|.
T Consensus 149 i~~~~-~l~~l~~L~~L~l~~n~i~~~-~~l~~l~~L~~L~l~~N~ 192 (197)
T 4ezg_A 149 ITDIM-PLKTLPELKSLNIQFDGVHDY-RGIEDFPKLNQLYAFSQT 192 (197)
T ss_dssp CCCCG-GGGGCSSCCEEECTTBCCCCC-TTGGGCSSCCEEEECBC-
T ss_pred ccccH-hhcCCCCCCEEECCCCCCcCh-HHhccCCCCCEEEeeCcc
Confidence 34566 578888888888888888763 344455666666666553
No 291
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.57 E-value=2.1e-15 Score=152.99 Aligned_cols=115 Identities=26% Similarity=0.335 Sum_probs=93.9
Q ss_pred cccCCCCCCEEeCcCCccCccCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeeccccccCCCChhhhhcCCCC
Q 013004 90 ELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSL 169 (451)
Q Consensus 90 ~l~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L 169 (451)
.+..+++|+.|+|++|++++ +| .+..+++|+.|+|++|++++..|..|.++++|+.|+|++|++++..|..+..+++|
T Consensus 191 ~~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 268 (452)
T 3zyi_A 191 AFEGLFNLKYLNLGMCNIKD-MP-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASL 268 (452)
T ss_dssp TTTTCTTCCEEECTTSCCSS-CC-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTC
T ss_pred hccCCCCCCEEECCCCcccc-cc-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCC
Confidence 36677888888888888874 44 47888889999999999988888889999999999999999998888889999999
Q ss_pred CeeccCCccccCcCCCC-CCCCcccccccccccccCCC
Q 013004 170 NILDLSNNRLSGPVPDN-GSFSQFTPISFENNLNLCGP 206 (451)
Q Consensus 170 ~~l~ls~N~l~~~~p~~-~~~~~~~~~~~~~n~~lCg~ 206 (451)
+.|++++|++++.++.. ..+..+..+.+.+|+--|..
T Consensus 269 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC 306 (452)
T 3zyi_A 269 VELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDC 306 (452)
T ss_dssp CEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEECST
T ss_pred CEEECCCCcCCccChHHhccccCCCEEEccCCCcCCCC
Confidence 99999999998766643 34667777788888766653
No 292
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.57 E-value=4.9e-15 Score=141.39 Aligned_cols=150 Identities=27% Similarity=0.281 Sum_probs=113.1
Q ss_pred hhhcchhhhhhhhhhhhhccCCCcceEE------------EeecCCccccccCCccccCCCCCCEEeCcCCccCccCCcc
Q 013004 47 ECEQLHLLISFLIFIRVLQSSSNLFVYL------------ISDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSA 114 (451)
Q Consensus 47 ~~~~l~~~~~~~~~~~~l~~~~n~~~~~------------~~~l~~n~~~g~~p~~l~~l~~L~~L~ls~N~l~~~~p~~ 114 (451)
.+..+|..+ ...++.|++++|.+... .++|++|.+++ +|+. +.+++|+.|++++|+++ .+|..
T Consensus 21 ~l~~ip~~~--~~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~-~~l~~L~~L~Ls~N~l~-~l~~~ 95 (290)
T 1p9a_G 21 NLTALPPDL--PKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTK-LQVD-GTLPVLGTLDLSHNQLQ-SLPLL 95 (290)
T ss_dssp CCSSCCSCC--CTTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCE-EECC-SCCTTCCEEECCSSCCS-SCCCC
T ss_pred CCCcCCCCC--CCCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCc-ccCC-CCCCcCCEEECCCCcCC-cCchh
Confidence 445555433 25677888888877543 45777888875 3433 78888888888888888 77888
Q ss_pred ccCCCCCcEEeCCCCcCCccCcccccCCcccceeeccccccCCCChhhhhcCCCCCeeccCCccccCcCCCC-CCCCccc
Q 013004 115 LGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPDN-GSFSQFT 193 (451)
Q Consensus 115 ~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~-~~~~~~~ 193 (451)
+..+++|+.|++++|++++..|..|..+++|++|+|++|++++..|..+..+++|+.|++++|++++.++.. ..+.++.
T Consensus 96 ~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~ 175 (290)
T 1p9a_G 96 GQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLD 175 (290)
T ss_dssp TTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCC
T ss_pred hccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCC
Confidence 888888999999999988666677888888999999999988777777888888999999999888655543 3456666
Q ss_pred cccccccc
Q 013004 194 PISFENNL 201 (451)
Q Consensus 194 ~~~~~~n~ 201 (451)
.+.+.+|.
T Consensus 176 ~L~L~~N~ 183 (290)
T 1p9a_G 176 TLLLQENS 183 (290)
T ss_dssp EEECCSSC
T ss_pred EEECCCCc
Confidence 66666663
No 293
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.56 E-value=2e-15 Score=144.88 Aligned_cols=181 Identities=22% Similarity=0.259 Sum_probs=143.2
Q ss_pred EEeeceeeecee----ccce-EEEeehhHHHhhhhcchhh-hhhhhhhhhhccCCCcceE--------------EEeecC
Q 013004 20 VCRVGIICLGIC----ARGF-TLLVTLKAVLQECEQLHLL-ISFLIFIRVLQSSSNLFVY--------------LISDLG 79 (451)
Q Consensus 20 ~~~~~~~~~~~~----~~~~-~~~~~l~~~~~~~~~l~~~-~~~~~~~~~l~~~~n~~~~--------------~~~~l~ 79 (451)
|...+|.|.+.. |.++ ..+..|....+.+..+|.. +..++.|+.|++++|.+.. ..++|+
T Consensus 7 C~~~~l~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls 86 (306)
T 2z66_A 7 CSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLS 86 (306)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECC
T ss_pred eCCCEEEcCCCCcccCCCCCCCCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECC
Confidence 344566666422 2211 2455555555667777765 5788999999999998763 346888
Q ss_pred CccccccCCccccCCCCCCEEeCcCCccCccCC-ccccCCCCCcEEeCCCCcCCccCcccccCCcccceeeccccccCC-
Q 013004 80 NAALSGELAPELGQLKNLELLELYGNNLSGHIP-SALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSG- 157 (451)
Q Consensus 80 ~n~~~g~~p~~l~~l~~L~~L~ls~N~l~~~~p-~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~- 157 (451)
+|.+.+ +|..+..+++|+.|++++|++++..+ ..+..+++|+.|++++|.+.+..|..++.+++|+.|++++|.+++
T Consensus 87 ~n~i~~-l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 165 (306)
T 2z66_A 87 FNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQEN 165 (306)
T ss_dssp SCSEEE-EEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGG
T ss_pred CCcccc-ChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccc
Confidence 998874 88889999999999999999996554 578999999999999999998888889999999999999999987
Q ss_pred CChhhhhcCCCCCeeccCCccccCcCCCC-CCCCccccccccccc
Q 013004 158 LIPTSLTTITSLNILDLSNNRLSGPVPDN-GSFSQFTPISFENNL 201 (451)
Q Consensus 158 ~~p~~~~~l~~L~~l~ls~N~l~~~~p~~-~~~~~~~~~~~~~n~ 201 (451)
.+|..+..+++|+.|++++|.+++..|.. ..+.++..+.+.+|.
T Consensus 166 ~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~ 210 (306)
T 2z66_A 166 FLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNN 210 (306)
T ss_dssp EECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSC
T ss_pred cchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCc
Confidence 57888999999999999999999876643 445667777777664
No 294
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.55 E-value=4e-15 Score=140.67 Aligned_cols=172 Identities=23% Similarity=0.219 Sum_probs=139.0
Q ss_pred cceEEEeehhHHHhhhhcchh-hhhhhhhhhhhccCCCcceEE------------EeecCCccccccCCccccCCCCCCE
Q 013004 33 RGFTLLVTLKAVLQECEQLHL-LISFLIFIRVLQSSSNLFVYL------------ISDLGNAALSGELAPELGQLKNLEL 99 (451)
Q Consensus 33 ~~~~~~~~l~~~~~~~~~l~~-~~~~~~~~~~l~~~~n~~~~~------------~~~l~~n~~~g~~p~~l~~l~~L~~ 99 (451)
.++..|+.|....+.+..++. .+..+..|+.|++++|.+... .+++++|.+.+..+..++.+++|+.
T Consensus 49 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 128 (276)
T 2z62_A 49 FSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKE 128 (276)
T ss_dssp TTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCE
T ss_pred ccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCE
Confidence 445566666666666666665 577888999999999987643 4577889998866668999999999
Q ss_pred EeCcCCccCc-cCCccccCCCCCcEEeCCCCcCCccCcccccCCcccc----eeeccccccCCCChhhhhcCCCCCeecc
Q 013004 100 LELYGNNLSG-HIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLK----YLRLNNNSLSGLIPTSLTTITSLNILDL 174 (451)
Q Consensus 100 L~ls~N~l~~-~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~----~L~ls~N~l~~~~p~~~~~l~~L~~l~l 174 (451)
|++++|.+++ .+|..+..+++|+.|++++|++++..+..+..+++|+ .|++++|.+++..+..+. ..+|+.|++
T Consensus 129 L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~-~~~L~~L~L 207 (276)
T 2z62_A 129 LNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFK-EIRLKELAL 207 (276)
T ss_dssp EECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSC-SCCEEEEEC
T ss_pred EECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCcccccCccccC-CCcccEEEC
Confidence 9999999986 3699999999999999999999987778888888777 899999999976555544 458999999
Q ss_pred CCccccCcCCCC-CCCCcccccccccccccCC
Q 013004 175 SNNRLSGPVPDN-GSFSQFTPISFENNLNLCG 205 (451)
Q Consensus 175 s~N~l~~~~p~~-~~~~~~~~~~~~~n~~lCg 205 (451)
++|.+++.++.. ..+.++..+.+.+|+-.|.
T Consensus 208 ~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 239 (276)
T 2z62_A 208 DTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 239 (276)
T ss_dssp CSSCCSCCCTTTTTTCCSCCEEECCSSCBCCC
T ss_pred CCCceeecCHhHhcccccccEEEccCCccccc
Confidence 999999876653 4567778888888876664
No 295
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.55 E-value=4.5e-15 Score=126.82 Aligned_cols=109 Identities=26% Similarity=0.289 Sum_probs=96.4
Q ss_pred EEeecCCcccc-ccCCccccCCCCCCEEeCcCCccCccCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeeccc
Q 013004 74 LISDLGNAALS-GELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNN 152 (451)
Q Consensus 74 ~~~~l~~n~~~-g~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~ 152 (451)
..+++++|.++ +.+|..++.+++|+.|++++|.+++. ..++.+++|+.|++++|.+++.+|..++.+++|++|++++
T Consensus 20 ~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ls~ 97 (149)
T 2je0_A 20 KELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNLSG 97 (149)
T ss_dssp SEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEECTT
T ss_pred eEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEECCC
Confidence 34566677776 78899899999999999999999965 7799999999999999999987999888899999999999
Q ss_pred cccCCC-ChhhhhcCCCCCeeccCCccccCcCC
Q 013004 153 NSLSGL-IPTSLTTITSLNILDLSNNRLSGPVP 184 (451)
Q Consensus 153 N~l~~~-~p~~~~~l~~L~~l~ls~N~l~~~~p 184 (451)
|++++. .|..+..+++|+.|++++|.+++.++
T Consensus 98 N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 130 (149)
T 2je0_A 98 NKIKDLSTIEPLKKLENLKSLDLFNCEVTNLND 130 (149)
T ss_dssp SCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTT
T ss_pred CcCCChHHHHHHhhCCCCCEEeCcCCcccchHH
Confidence 999874 34889999999999999999998655
No 296
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.55 E-value=1.8e-14 Score=126.22 Aligned_cols=107 Identities=25% Similarity=0.348 Sum_probs=93.7
Q ss_pred eecCCccccccCCccccCCCCCCEEeCcCCccCccCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeecccccc
Q 013004 76 SDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSL 155 (451)
Q Consensus 76 ~~l~~n~~~g~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l 155 (451)
+++++|.++ .+|..+. ++|+.|+|++|++++..|..|..+++|+.|+|++|++++..|..|..+++|++|+|++|++
T Consensus 14 l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l 90 (170)
T 3g39_A 14 VDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQL 90 (170)
T ss_dssp EECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred EEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCcc
Confidence 455666665 4787764 8999999999999988899999999999999999999976666789999999999999999
Q ss_pred CCCChhhhhcCCCCCeeccCCccccCcCCC
Q 013004 156 SGLIPTSLTTITSLNILDLSNNRLSGPVPD 185 (451)
Q Consensus 156 ~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~ 185 (451)
++..|..+..+++|+.|++++|+++...+.
T Consensus 91 ~~~~~~~~~~l~~L~~L~L~~N~~~c~c~~ 120 (170)
T 3g39_A 91 KSIPRGAFDNLKSLTHIWLLNNPWDCACSD 120 (170)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCBCTTBGG
T ss_pred CEeCHHHhcCCCCCCEEEeCCCCCCCCchh
Confidence 987777899999999999999999877653
No 297
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.55 E-value=5.3e-15 Score=153.98 Aligned_cols=107 Identities=30% Similarity=0.330 Sum_probs=94.8
Q ss_pred EeecCCccccccCCccccCCCCCCEEeCcCCccCccCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeeccccc
Q 013004 75 ISDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNS 154 (451)
Q Consensus 75 ~~~l~~n~~~g~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~ 154 (451)
.++|++|.+++ +|. ++.+++|+.|+|++|+++ .+|..++.+++|+.|+|++|++++ +| .++.+++|+.|+|++|+
T Consensus 445 ~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~ 519 (567)
T 1dce_A 445 VLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNR 519 (567)
T ss_dssp EEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSC
T ss_pred EEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCC
Confidence 47888999886 776 899999999999999998 889999999999999999999985 77 78999999999999999
Q ss_pred cCCCC-hhhhhcCCCCCeeccCCccccCcCCCC
Q 013004 155 LSGLI-PTSLTTITSLNILDLSNNRLSGPVPDN 186 (451)
Q Consensus 155 l~~~~-p~~~~~l~~L~~l~ls~N~l~~~~p~~ 186 (451)
+++.+ |..++.+++|+.|++++|++++.+|..
T Consensus 520 l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~ 552 (567)
T 1dce_A 520 LQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQ 552 (567)
T ss_dssp CCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCT
T ss_pred CCCCCCcHHHhcCCCCCEEEecCCcCCCCccHH
Confidence 99876 889999999999999999999887754
No 298
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.55 E-value=2.1e-14 Score=126.25 Aligned_cols=108 Identities=23% Similarity=0.313 Sum_probs=93.5
Q ss_pred EeecCCccccccCCccccCCCCCCEEeCcCCccCccCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeeccccc
Q 013004 75 ISDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNS 154 (451)
Q Consensus 75 ~~~l~~n~~~g~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~ 154 (451)
.+++++|.++ .+|..+. ++|+.|+|++|++++..|..|..+++|+.|+|++|+|++..+..|.++++|+.|+|++|+
T Consensus 16 ~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~ 92 (174)
T 2r9u_A 16 LVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNH 92 (174)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCc
Confidence 3456666663 6888775 899999999999998889999999999999999999996555567999999999999999
Q ss_pred cCCCChhhhhcCCCCCeeccCCccccCcCCC
Q 013004 155 LSGLIPTSLTTITSLNILDLSNNRLSGPVPD 185 (451)
Q Consensus 155 l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~ 185 (451)
+++..+..+..+++|+.|++++|++....+.
T Consensus 93 l~~l~~~~~~~l~~L~~L~L~~N~~~c~~~~ 123 (174)
T 2r9u_A 93 LKSIPRGAFDNLKSLTHIYLYNNPWDCECRD 123 (174)
T ss_dssp CCCCCTTTTTTCTTCSEEECCSSCBCTTBGG
T ss_pred cceeCHHHhccccCCCEEEeCCCCccccccc
Confidence 9987666799999999999999999876543
No 299
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.54 E-value=5.5e-15 Score=153.97 Aligned_cols=170 Identities=20% Similarity=0.244 Sum_probs=125.9
Q ss_pred eEEEeehhHHHhhhhcc---hhhhhhhhhhhhhccCCCcceEE-----------EeecCCccccccCC-ccccCCCCCCE
Q 013004 35 FTLLVTLKAVLQECEQL---HLLISFLIFIRVLQSSSNLFVYL-----------ISDLGNAALSGELA-PELGQLKNLEL 99 (451)
Q Consensus 35 ~~~~~~l~~~~~~~~~l---~~~~~~~~~~~~l~~~~n~~~~~-----------~~~l~~n~~~g~~p-~~l~~l~~L~~ 99 (451)
+..|..|....+.+..+ +..+..+..|+.|++++|.+... .+++++|.+.+..| ..+..+++|+.
T Consensus 346 ~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~ 425 (570)
T 2z63_A 346 LPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIY 425 (570)
T ss_dssp CTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEEEETCTTCCEEECTTSEEESCTTSCTTTTCTTCCE
T ss_pred CCCCCEEeCcCCccCccccccccccccCccCEEECCCCccccccccccccCCCCEEEccCCccccccchhhhhcCCCCCE
Confidence 33344444333333333 45566677788888888876543 34666777777655 45778888888
Q ss_pred EeCcCCccCccCCccccCCCCCcEEeCCCCcCC-ccCcccccCCcccceeeccccccCCCChhhhhcCCCCCeeccCCcc
Q 013004 100 LELYGNNLSGHIPSALGNLIKLKSLDLYSNLFN-GTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSNNR 178 (451)
Q Consensus 100 L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~-g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~ 178 (451)
|++++|.+++..|..+..+++|+.|++++|.++ +.+|..++.+++|+.|++++|++++..|..+..+++|+.|++++|+
T Consensus 426 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 505 (570)
T 2z63_A 426 LDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQ 505 (570)
T ss_dssp EECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred EeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCc
Confidence 888888888888888888888888888888887 5688888888888888888888888778888888888888888888
Q ss_pred ccCcCCCC-CCCCcccccccccccccC
Q 013004 179 LSGPVPDN-GSFSQFTPISFENNLNLC 204 (451)
Q Consensus 179 l~~~~p~~-~~~~~~~~~~~~~n~~lC 204 (451)
+++.+|.. ..+.++..+.+.+|+..|
T Consensus 506 l~~~~~~~~~~l~~L~~L~l~~N~~~~ 532 (570)
T 2z63_A 506 LKSVPDGIFDRLTSLQKIWLHTNPWDC 532 (570)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred CCCCCHHHhhcccCCcEEEecCCcccC
Confidence 88876653 456667777777776554
No 300
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.54 E-value=7.3e-15 Score=128.17 Aligned_cols=125 Identities=26% Similarity=0.246 Sum_probs=102.7
Q ss_pred EEeecCCcccc-ccCCccccCCCCCCEEeCcCCccCccCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeeccc
Q 013004 74 LISDLGNAALS-GELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNN 152 (451)
Q Consensus 74 ~~~~l~~n~~~-g~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~ 152 (451)
..+++++|.++ +.+|..+..+++|+.|++++|.+++. ..+..+++|+.|++++|++++.+|..+..+++|++|++++
T Consensus 27 ~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 104 (168)
T 2ell_A 27 RELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNLSG 104 (168)
T ss_dssp SEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEECBS
T ss_pred CEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEeccC
Confidence 44566677776 77888889999999999999999865 7899999999999999999977888888899999999999
Q ss_pred cccCCCC-hhhhhcCCCCCeeccCCccccCcCC----CCCCCCcccccccccc
Q 013004 153 NSLSGLI-PTSLTTITSLNILDLSNNRLSGPVP----DNGSFSQFTPISFENN 200 (451)
Q Consensus 153 N~l~~~~-p~~~~~l~~L~~l~ls~N~l~~~~p----~~~~~~~~~~~~~~~n 200 (451)
|++++.. +..+..+++|+.|++++|.+++.++ ....+..+..+...+|
T Consensus 105 N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n 157 (168)
T 2ell_A 105 NKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDR 157 (168)
T ss_dssp SSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEET
T ss_pred CccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCC
Confidence 9998642 2788999999999999999998766 3344556666555554
No 301
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.54 E-value=9.2e-15 Score=137.85 Aligned_cols=168 Identities=24% Similarity=0.227 Sum_probs=138.3
Q ss_pred EeehhHHHhhhhcchh-hhhhhhhhhhhccCCCcce------------EEEeecCCccccccCCccccCCCCCCEEeCcC
Q 013004 38 LVTLKAVLQECEQLHL-LISFLIFIRVLQSSSNLFV------------YLISDLGNAALSGELAPELGQLKNLELLELYG 104 (451)
Q Consensus 38 ~~~l~~~~~~~~~l~~-~~~~~~~~~~l~~~~n~~~------------~~~~~l~~n~~~g~~p~~l~~l~~L~~L~ls~ 104 (451)
++.|....+.+..++. .++.+..|+.|++++|.++ +..++|++|.+++..+..+..+++|+.|++++
T Consensus 39 l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 118 (270)
T 2o6q_A 39 TKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDR 118 (270)
T ss_dssp CSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCS
T ss_pred CCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCC
Confidence 4444444555666665 5778889999999988654 34568889999875556678999999999999
Q ss_pred CccCccCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeeccccccCCCChhhhhcCCCCCeeccCCccccCcCC
Q 013004 105 NNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVP 184 (451)
Q Consensus 105 N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p 184 (451)
|++++..|..+..+++|+.|+|++|.+++..+..++.+++|+.|+|++|++++..|..+..+++|+.|++++|++++.++
T Consensus 119 n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 198 (270)
T 2o6q_A 119 NQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPE 198 (270)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred CccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCH
Confidence 99998888889999999999999999996666668999999999999999998777789999999999999999997665
Q ss_pred C-CCCCCcccccccccccccCC
Q 013004 185 D-NGSFSQFTPISFENNLNLCG 205 (451)
Q Consensus 185 ~-~~~~~~~~~~~~~~n~~lCg 205 (451)
. ...+..+..+.+.+|+-.|.
T Consensus 199 ~~~~~l~~L~~L~l~~N~~~c~ 220 (270)
T 2o6q_A 199 GAFDSLEKLKMLQLQENPWDCT 220 (270)
T ss_dssp TTTTTCTTCCEEECCSSCBCCS
T ss_pred HHhccccCCCEEEecCCCeeCC
Confidence 4 34466778888888876664
No 302
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.53 E-value=3.3e-15 Score=157.05 Aligned_cols=151 Identities=26% Similarity=0.266 Sum_probs=94.6
Q ss_pred ceEEEeehhHHHhhhhcc---hhhhhhhhhhhhhccCCCcceEE------------EeecCCccccccCCcc-ccCCCCC
Q 013004 34 GFTLLVTLKAVLQECEQL---HLLISFLIFIRVLQSSSNLFVYL------------ISDLGNAALSGELAPE-LGQLKNL 97 (451)
Q Consensus 34 ~~~~~~~l~~~~~~~~~l---~~~~~~~~~~~~l~~~~n~~~~~------------~~~l~~n~~~g~~p~~-l~~l~~L 97 (451)
++..|..|....+.+..+ +..++.++.|+.|++++|.+... .+++++|.+.+..|+. +..+++|
T Consensus 348 ~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L 427 (606)
T 3t6q_A 348 NLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLL 427 (606)
T ss_dssp TCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTC
T ss_pred ccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccC
Confidence 344444444444444444 33455666677777776655432 3456666666655544 6667777
Q ss_pred CEEeCcCCccCccCCccccCCCCCcEEeCCCCcCCcc---CcccccCCcccceeeccccccCCCChhhhhcCCCCCeecc
Q 013004 98 ELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGT---IPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDL 174 (451)
Q Consensus 98 ~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~---~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~l 174 (451)
+.|++++|.+++..|..++.+++|+.|++++|.+++. .+..++.+++|+.|++++|++++..|..+..+++|+.|++
T Consensus 428 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 507 (606)
T 3t6q_A 428 KVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDL 507 (606)
T ss_dssp CEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred CEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEEC
Confidence 7777777777766666677777777777777776652 2345666677777777777776666666677777777777
Q ss_pred CCccccCcCC
Q 013004 175 SNNRLSGPVP 184 (451)
Q Consensus 175 s~N~l~~~~p 184 (451)
++|++++.+|
T Consensus 508 s~N~l~~~~~ 517 (606)
T 3t6q_A 508 SHNRLTSSSI 517 (606)
T ss_dssp CSSCCCGGGG
T ss_pred CCCccCcCCh
Confidence 7777766555
No 303
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.53 E-value=2.5e-14 Score=125.92 Aligned_cols=111 Identities=24% Similarity=0.244 Sum_probs=90.7
Q ss_pred EeecCCccccccCCccccCCCCCCEEeCcCCccCccCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeeccccc
Q 013004 75 ISDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNS 154 (451)
Q Consensus 75 ~~~l~~n~~~g~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~ 154 (451)
.+++++|.+++..+..++.+++|+.|++++|++++..+..+..+++|+.|++++|++++..|..++.+++|++|++++|+
T Consensus 32 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 111 (177)
T 2o6r_A 32 RLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQ 111 (177)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCc
Confidence 34555566665444557889999999999999997666678899999999999999997666678899999999999999
Q ss_pred cCCCChhhhhcCCCCCeeccCCccccCcCCC
Q 013004 155 LSGLIPTSLTTITSLNILDLSNNRLSGPVPD 185 (451)
Q Consensus 155 l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~ 185 (451)
+++..+..+..+++|+.|++++|++++..|.
T Consensus 112 l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 142 (177)
T 2o6r_A 112 LKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 142 (177)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred ceEeCHHHhcCCcccCEEEecCCCeeccCcc
Confidence 9876666678899999999999999887663
No 304
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.53 E-value=7e-14 Score=123.04 Aligned_cols=126 Identities=21% Similarity=0.260 Sum_probs=102.9
Q ss_pred eecCCccccccCCccccCCCCCCEEeCcCCccCccCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeecccccc
Q 013004 76 SDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSL 155 (451)
Q Consensus 76 ~~l~~n~~~g~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l 155 (451)
+++++|.+. .+|..+. ++|+.|++++|++++..+..++.+++|+.|++++|++++..+..++.+++|+.|++++|++
T Consensus 12 l~~~~~~l~-~~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l 88 (177)
T 2o6r_A 12 IRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKL 88 (177)
T ss_dssp EECCSSCCS-SCCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred EEecCCCCc-cCCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCc
Confidence 344555554 4665543 7999999999999977777789999999999999999966666789999999999999999
Q ss_pred CCCChhhhhcCCCCCeeccCCccccCcCCCC-CCCCcccccccccccccC
Q 013004 156 SGLIPTSLTTITSLNILDLSNNRLSGPVPDN-GSFSQFTPISFENNLNLC 204 (451)
Q Consensus 156 ~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~-~~~~~~~~~~~~~n~~lC 204 (451)
++..+..+..+++|+.|++++|.+++.++.. ..+..+..+.+.+|+..|
T Consensus 89 ~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 138 (177)
T 2o6r_A 89 QSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 138 (177)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred cccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeec
Confidence 9887778899999999999999999766653 446677777777775444
No 305
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.53 E-value=1.2e-15 Score=147.23 Aligned_cols=166 Identities=21% Similarity=0.150 Sum_probs=116.6
Q ss_pred ceEEEeehhHHHhhhh-cchhhh--hhhhhhhhhccCCCcce----------------EEEeecCCccccccCCccccCC
Q 013004 34 GFTLLVTLKAVLQECE-QLHLLI--SFLIFIRVLQSSSNLFV----------------YLISDLGNAALSGELAPELGQL 94 (451)
Q Consensus 34 ~~~~~~~l~~~~~~~~-~l~~~~--~~~~~~~~l~~~~n~~~----------------~~~~~l~~n~~~g~~p~~l~~l 94 (451)
+++.++.|....+.+. .+|..+ +.+..|+.|++++|.+. +..++|++|.+++..|..++.+
T Consensus 93 ~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l 172 (312)
T 1wwl_A 93 GISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATRDAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVF 172 (312)
T ss_dssp TTSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSSSSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCC
T ss_pred CcCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcchhHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccC
Confidence 3555666555555554 455544 66777777777777654 3456777888887777888888
Q ss_pred CCCCEEeCcCCccCcc--CCccc--cCCCCCcEEeCCCCcCCc--cCc-ccccCCcccceeeccccccCCCCh-hhhhcC
Q 013004 95 KNLELLELYGNNLSGH--IPSAL--GNLIKLKSLDLYSNLFNG--TIP-DTLANLKQLKYLRLNNNSLSGLIP-TSLTTI 166 (451)
Q Consensus 95 ~~L~~L~ls~N~l~~~--~p~~~--~~l~~L~~L~ls~N~l~g--~~p-~~~~~l~~L~~L~ls~N~l~~~~p-~~~~~l 166 (451)
++|+.|++++|++.+. +|..+ +.+++|+.|+|++|++++ .++ ..+..+++|+.|++++|++++.+| ..+..+
T Consensus 173 ~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l 252 (312)
T 1wwl_A 173 PALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWP 252 (312)
T ss_dssp SSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCC
T ss_pred CCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhc
Confidence 8889999988888765 34444 788888888888888873 222 234577888888888888887765 455667
Q ss_pred CCCCeeccCCccccCcCCCCCCCCccccccccccc
Q 013004 167 TSLNILDLSNNRLSGPVPDNGSFSQFTPISFENNL 201 (451)
Q Consensus 167 ~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~ 201 (451)
++|+.|++++|.++ .+|.... .++..+.+.+|.
T Consensus 253 ~~L~~L~Ls~N~l~-~ip~~~~-~~L~~L~Ls~N~ 285 (312)
T 1wwl_A 253 SQLNSLNLSFTGLK-QVPKGLP-AKLSVLDLSYNR 285 (312)
T ss_dssp TTCCEEECTTSCCS-SCCSSCC-SEEEEEECCSSC
T ss_pred CCCCEEECCCCccC-hhhhhcc-CCceEEECCCCC
Confidence 88888888888888 5565433 566666666663
No 306
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.53 E-value=9e-16 Score=162.46 Aligned_cols=151 Identities=23% Similarity=0.309 Sum_probs=103.8
Q ss_pred hhcchhhhhhhhhhhhhccCCCcceE-------------------------------EEeecCCccccccCCccccCCCC
Q 013004 48 CEQLHLLISFLIFIRVLQSSSNLFVY-------------------------------LISDLGNAALSGELAPELGQLKN 96 (451)
Q Consensus 48 ~~~l~~~~~~~~~~~~l~~~~n~~~~-------------------------------~~~~l~~n~~~g~~p~~l~~l~~ 96 (451)
++.+|..++.++.|+.|++++|.++. ..++|++|.+.|.+|..++++++
T Consensus 195 l~~ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~ 274 (636)
T 4eco_A 195 ITFVSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPE 274 (636)
T ss_dssp EEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSS
T ss_pred CccCCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCC
Confidence 34466667777777777777776554 13456677777778887888888
Q ss_pred CCEEeCcCCc-cCc-cCCccccCC------CCCcEEeCCCCcCCccCcc--cccCCcccceeeccccccCCCChhhhhcC
Q 013004 97 LELLELYGNN-LSG-HIPSALGNL------IKLKSLDLYSNLFNGTIPD--TLANLKQLKYLRLNNNSLSGLIPTSLTTI 166 (451)
Q Consensus 97 L~~L~ls~N~-l~~-~~p~~~~~l------~~L~~L~ls~N~l~g~~p~--~~~~l~~L~~L~ls~N~l~~~~p~~~~~l 166 (451)
|+.|++++|+ ++| .+|..++.+ ++|+.|++++|+++ .+|. .++++++|+.|++++|+++|.+| .++.+
T Consensus 275 L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l 352 (636)
T 4eco_A 275 MQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSE 352 (636)
T ss_dssp CCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEE
T ss_pred CCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCC
Confidence 8888888887 777 677777665 77777777777777 6776 67777777777777777776677 66777
Q ss_pred CCCCeeccCCccccCcCCC-CCCCCc-cccccccccc
Q 013004 167 TSLNILDLSNNRLSGPVPD-NGSFSQ-FTPISFENNL 201 (451)
Q Consensus 167 ~~L~~l~ls~N~l~~~~p~-~~~~~~-~~~~~~~~n~ 201 (451)
++|+.|++++|.++ .+|. ...+.. +..+.+.+|.
T Consensus 353 ~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~ 388 (636)
T 4eco_A 353 IKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNK 388 (636)
T ss_dssp EEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSC
T ss_pred CCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCc
Confidence 77777777777776 3443 333444 5555555553
No 307
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.53 E-value=3.4e-15 Score=144.25 Aligned_cols=161 Identities=24% Similarity=0.156 Sum_probs=92.8
Q ss_pred ceEEEeehhHHHhhhhcchhhhhhhhhhhhhccCCCcceEE-------EeecCCccccccCCccccCCCCCCEEeCcCCc
Q 013004 34 GFTLLVTLKAVLQECEQLHLLISFLIFIRVLQSSSNLFVYL-------ISDLGNAALSGELAPELGQLKNLELLELYGNN 106 (451)
Q Consensus 34 ~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~l~~~~n~~~~~-------~~~l~~n~~~g~~p~~l~~l~~L~~L~ls~N~ 106 (451)
++..|..|....+.+..+++ ++.+..|+.|++++|.+... .+++++|.+++..+. .+++|+.|++++|+
T Consensus 56 ~l~~L~~L~Ls~n~l~~~~~-~~~l~~L~~L~Ls~n~l~~l~~~~~L~~L~l~~n~l~~~~~~---~~~~L~~L~l~~N~ 131 (317)
T 3o53_A 56 PFTKLELLNLSSNVLYETLD-LESLSTLRTLDLNNNYVQELLVGPSIETLHAANNNISRVSCS---RGQGKKNIYLANNK 131 (317)
T ss_dssp TCTTCCEEECTTSCCEEEEE-ETTCTTCCEEECCSSEEEEEEECTTCCEEECCSSCCSEEEEC---CCSSCEEEECCSSC
T ss_pred CCCcCCEEECCCCcCCcchh-hhhcCCCCEEECcCCccccccCCCCcCEEECCCCccCCcCcc---ccCCCCEEECCCCC
Confidence 33444444444444444443 55566666777776665543 244555555543222 24566777777777
Q ss_pred cCccCCccccCCCCCcEEeCCCCcCCccCcccc-cCCcccceeeccccccCCCChhhhhcCCCCCeeccCCccccCcCCC
Q 013004 107 LSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTL-ANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPD 185 (451)
Q Consensus 107 l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~-~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~ 185 (451)
+++..|..++.+++|+.|++++|.+++..|..+ ..+++|++|+|++|.+++. |. ...+++|+.|++++|.+++.++.
T Consensus 132 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~l~~~ 209 (317)
T 3o53_A 132 ITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAFMGPE 209 (317)
T ss_dssp CCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECCSSCCCEECGG
T ss_pred CCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-cc-ccccccCCEEECCCCcCCcchhh
Confidence 776556666667777777777777765555555 3566677777777776643 32 23366666777777766665554
Q ss_pred CCCCCcccccccccc
Q 013004 186 NGSFSQFTPISFENN 200 (451)
Q Consensus 186 ~~~~~~~~~~~~~~n 200 (451)
...+..+..+.+.+|
T Consensus 210 ~~~l~~L~~L~L~~N 224 (317)
T 3o53_A 210 FQSAAGVTWISLRNN 224 (317)
T ss_dssp GGGGTTCSEEECTTS
T ss_pred hcccCcccEEECcCC
Confidence 444455555555554
No 308
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.53 E-value=1e-14 Score=153.51 Aligned_cols=154 Identities=20% Similarity=0.261 Sum_probs=126.6
Q ss_pred hhhhhhhhhhhhhccCCCcc-------------eEEEeecCCccccccCCccccCCCCCCEEeCcCCccC-ccCCccccC
Q 013004 52 HLLISFLIFIRVLQSSSNLF-------------VYLISDLGNAALSGELAPELGQLKNLELLELYGNNLS-GHIPSALGN 117 (451)
Q Consensus 52 ~~~~~~~~~~~~l~~~~n~~-------------~~~~~~l~~n~~~g~~p~~l~~l~~L~~L~ls~N~l~-~~~p~~~~~ 117 (451)
+..+..+..++.++++.|.. .....+++.|.+.+..|..+..++.|+.|++++|++. +.+|..+..
T Consensus 413 ~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~ 492 (635)
T 4g8a_A 413 SSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTE 492 (635)
T ss_dssp CSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTT
T ss_pred cccccccccccchhhhhccccccccccccccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhh
Confidence 33344455566666654432 2345688899999888888999999999999999854 467889999
Q ss_pred CCCCcEEeCCCCcCCccCcccccCCcccceeeccccccCCCChhhhhcCCCCCeeccCCccccCcCCCCC-CC-Cccccc
Q 013004 118 LIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPDNG-SF-SQFTPI 195 (451)
Q Consensus 118 l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~~-~~-~~~~~~ 195 (451)
+++|+.|+|++|++++..|..|+++++|+.|+|++|++++..|..+..+++|+.||+++|++++.+|... .+ .++..+
T Consensus 493 l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L 572 (635)
T 4g8a_A 493 LRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFL 572 (635)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEE
T ss_pred ccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEE
Confidence 9999999999999998889999999999999999999999888899999999999999999999888642 23 467777
Q ss_pred ccccccccCC
Q 013004 196 SFENNLNLCG 205 (451)
Q Consensus 196 ~~~~n~~lCg 205 (451)
.+.+|+-.|.
T Consensus 573 ~L~~Np~~C~ 582 (635)
T 4g8a_A 573 NLTQNDFACT 582 (635)
T ss_dssp ECTTCCBCCS
T ss_pred EeeCCCCccc
Confidence 8888887773
No 309
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.53 E-value=5.8e-15 Score=153.83 Aligned_cols=154 Identities=20% Similarity=0.224 Sum_probs=135.0
Q ss_pred cceEEEeehhHHHhhhhcchhhhhhhhhhhhhccCCCcceE-------------EEeecCCccccccCCccccCCCCCCE
Q 013004 33 RGFTLLVTLKAVLQECEQLHLLISFLIFIRVLQSSSNLFVY-------------LISDLGNAALSGELAPELGQLKNLEL 99 (451)
Q Consensus 33 ~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~l~~~~n~~~~-------------~~~~l~~n~~~g~~p~~l~~l~~L~~ 99 (451)
.++..++.|....+.+..++..+..++.|+.|++++|.+.. ..+++++|.+.+..|..+..+++|+.
T Consensus 370 ~~~~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 449 (570)
T 2z63_A 370 FGTTSLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEV 449 (570)
T ss_dssp HTCSCCCEEECCSCSEEEEEEEEETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCE
T ss_pred cccCccCEEECCCCccccccccccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcE
Confidence 34556666666656666677667788899999998887643 35688999999999999999999999
Q ss_pred EeCcCCccC-ccCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeeccccccCCCChhhhhcCCCCCeeccCCcc
Q 013004 100 LELYGNNLS-GHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSNNR 178 (451)
Q Consensus 100 L~ls~N~l~-~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~ 178 (451)
|++++|.++ +.+|..+..+++|+.|++++|++++..|..++++++|+.|++++|++++.+|..+..+++|+.|++++|+
T Consensus 450 L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~ 529 (570)
T 2z63_A 450 LKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNP 529 (570)
T ss_dssp EECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSC
T ss_pred EECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCc
Confidence 999999998 6899999999999999999999998889999999999999999999999888889999999999999999
Q ss_pred ccCcCCCC
Q 013004 179 LSGPVPDN 186 (451)
Q Consensus 179 l~~~~p~~ 186 (451)
+++.+|..
T Consensus 530 ~~~~~~~~ 537 (570)
T 2z63_A 530 WDCSCPRI 537 (570)
T ss_dssp BCCCTTTT
T ss_pred ccCCCcch
Confidence 99988864
No 310
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.51 E-value=6.8e-15 Score=154.63 Aligned_cols=149 Identities=19% Similarity=0.190 Sum_probs=101.7
Q ss_pred hhhhhhhhhhhhhccCCCcceEE-----------EeecCCccccccCC-ccccCCCCCCEEeCcCCccCccCCccccCCC
Q 013004 52 HLLISFLIFIRVLQSSSNLFVYL-----------ISDLGNAALSGELA-PELGQLKNLELLELYGNNLSGHIPSALGNLI 119 (451)
Q Consensus 52 ~~~~~~~~~~~~l~~~~n~~~~~-----------~~~l~~n~~~g~~p-~~l~~l~~L~~L~ls~N~l~~~~p~~~~~l~ 119 (451)
+..++.+..|+.|++++|.+... .+++++|.+.+..| ..++.+++|+.|++++|.+++.+|..++.++
T Consensus 369 ~~~~~~~~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 448 (606)
T 3vq2_A 369 SYSDLGTNSLRHLDLSFNGAIIMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLT 448 (606)
T ss_dssp CHHHHCCSCCCEEECCSCSEEEECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCT
T ss_pred hhhhccCCcccEeECCCCccccchhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCC
Confidence 44555666677777777665432 34566777776655 5667777777777777777777777777777
Q ss_pred CCcEEeCCCCcCCc-cCcccccCCcccceeeccccccCCCChhhhhcCCCCCeeccCCccccCcCCC-CCCCCccccccc
Q 013004 120 KLKSLDLYSNLFNG-TIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPD-NGSFSQFTPISF 197 (451)
Q Consensus 120 ~L~~L~ls~N~l~g-~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~-~~~~~~~~~~~~ 197 (451)
+|+.|++++|.+++ .+|..++.+++|+.|++++|++++.+|..+..+++|+.|++++|++++.+|. ...+.+++.+.+
T Consensus 449 ~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l 528 (606)
T 3vq2_A 449 SLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDC 528 (606)
T ss_dssp TCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEEC
T ss_pred CCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEEC
Confidence 77777777777776 3566777777777777777777777777777777777777777777776554 233455555555
Q ss_pred ccc
Q 013004 198 ENN 200 (451)
Q Consensus 198 ~~n 200 (451)
.+|
T Consensus 529 ~~N 531 (606)
T 3vq2_A 529 SFN 531 (606)
T ss_dssp TTS
T ss_pred CCC
Confidence 555
No 311
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.51 E-value=1.7e-14 Score=141.98 Aligned_cols=156 Identities=21% Similarity=0.206 Sum_probs=109.8
Q ss_pred hhcchhhhhhhhhhhhhccCCCcceE-------------EEeecCCccccccCCccccCCCCCCEEeCcCCccCccCCcc
Q 013004 48 CEQLHLLISFLIFIRVLQSSSNLFVY-------------LISDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSA 114 (451)
Q Consensus 48 ~~~l~~~~~~~~~~~~l~~~~n~~~~-------------~~~~l~~n~~~g~~p~~l~~l~~L~~L~ls~N~l~~~~p~~ 114 (451)
+..+|..+ ...++.|++++|.++. ..++|++|.+++..|..+..+++|+.|+|++|++++..+..
T Consensus 30 l~~iP~~~--~~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 107 (361)
T 2xot_A 30 LPNVPQSL--PSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFL 107 (361)
T ss_dssp CSSCCSSC--CTTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTT
T ss_pred cCccCccC--CCCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHH
Confidence 44445432 2346677777776553 24567788887766667888889999999999988776777
Q ss_pred ccCCCCCcEEeCCCCcCCccCcccccCCcccceeeccccccCCCChhhh---hcCCCCCeeccCCccccCcCCCC-CCCC
Q 013004 115 LGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSL---TTITSLNILDLSNNRLSGPVPDN-GSFS 190 (451)
Q Consensus 115 ~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~---~~l~~L~~l~ls~N~l~~~~p~~-~~~~ 190 (451)
|..+++|+.|+|++|++++..|..|..+++|+.|+|++|++++..+..+ ..+++|+.||+++|+|++.++.. ..+.
T Consensus 108 ~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~ 187 (361)
T 2xot_A 108 FSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLP 187 (361)
T ss_dssp TTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCCCCHHHHHHSC
T ss_pred hCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCccCHHHhhhcc
Confidence 8888999999999999887778888888999999999999986544444 56888899999999888644321 1111
Q ss_pred c--ccccccccccccCC
Q 013004 191 Q--FTPISFENNLNLCG 205 (451)
Q Consensus 191 ~--~~~~~~~~n~~lCg 205 (451)
. +..+.+.+|+-.|.
T Consensus 188 ~~~l~~l~l~~N~~~C~ 204 (361)
T 2xot_A 188 AWVKNGLYLHNNPLECD 204 (361)
T ss_dssp HHHHTTEECCSSCEECC
T ss_pred HhhcceEEecCCCccCC
Confidence 1 13455666765553
No 312
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.50 E-value=5e-14 Score=142.63 Aligned_cols=130 Identities=22% Similarity=0.151 Sum_probs=117.2
Q ss_pred hhhhhhccCCCcceE------------EEeecCCccccccCCccccCCCCCCEEeCcCCccCccCCccccCCCCCcEEeC
Q 013004 59 IFIRVLQSSSNLFVY------------LISDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDL 126 (451)
Q Consensus 59 ~~~~~l~~~~n~~~~------------~~~~l~~n~~~g~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l 126 (451)
..++.|++++|.+.. ..++|++|.+++..|..++.+++|+.|+|++|.+++..|..++.+++|+.|+|
T Consensus 275 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 354 (455)
T 3v47_A 275 SGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDL 354 (455)
T ss_dssp SCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEEC
T ss_pred cCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEEC
Confidence 467888888886653 35788999999988889999999999999999999888999999999999999
Q ss_pred CCCcCCccCcccccCCcccceeeccccccCCCChhhhhcCCCCCeeccCCccccCcCCCCCC
Q 013004 127 YSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPDNGS 188 (451)
Q Consensus 127 s~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~~~ 188 (451)
++|++++..|..++.+++|++|+|++|++++..+..+..+++|+.|++++|++++.+|....
T Consensus 355 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~ 416 (455)
T 3v47_A 355 SYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDY 416 (455)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTTHH
T ss_pred CCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCCcchH
Confidence 99999988899999999999999999999987777889999999999999999999886543
No 313
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.50 E-value=2e-14 Score=139.50 Aligned_cols=164 Identities=20% Similarity=0.202 Sum_probs=98.4
Q ss_pred ceEEEeehhHHHhhhhcc-hhhhhhhhhhhhhccCCCcceE---------EEeecCCccccccCCccccCCCCCCEEeCc
Q 013004 34 GFTLLVTLKAVLQECEQL-HLLISFLIFIRVLQSSSNLFVY---------LISDLGNAALSGELAPELGQLKNLELLELY 103 (451)
Q Consensus 34 ~~~~~~~l~~~~~~~~~l-~~~~~~~~~~~~l~~~~n~~~~---------~~~~l~~n~~~g~~p~~l~~l~~L~~L~ls 103 (451)
++..|+.|....+.+..+ |..++.+..|+.|++++|.++. ..+++++|.+++..+..+..+++|+.|+++
T Consensus 74 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~l~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 153 (330)
T 1xku_A 74 NLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELG 153 (330)
T ss_dssp TCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCSBCCSSCCTTCCEEECCSSCCCBBCHHHHTTCTTCCEEECC
T ss_pred cCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCCccChhhcccccEEECCCCcccccCHhHhcCCccccEEECC
Confidence 344444444444445555 4456666777777777776542 234566666665555556777777777777
Q ss_pred CCccCc--cCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeeccccccCCCChhhhhcCCCCCeeccCCccccC
Q 013004 104 GNNLSG--HIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSNNRLSG 181 (451)
Q Consensus 104 ~N~l~~--~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~ 181 (451)
+|.++. ..|..+..+++|+.|++++|.++ .+|..+. ++|+.|++++|++++..|..+..+++|+.|++++|.+++
T Consensus 154 ~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~ 230 (330)
T 1xku_A 154 TNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISA 230 (330)
T ss_dssp SSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-SCCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCE
T ss_pred CCcCCccCcChhhccCCCCcCEEECCCCccc-cCCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCce
Confidence 777753 55666777777777777766665 4554432 556666666666666556666666666666666666665
Q ss_pred cCCC-CCCCCcccccccccc
Q 013004 182 PVPD-NGSFSQFTPISFENN 200 (451)
Q Consensus 182 ~~p~-~~~~~~~~~~~~~~n 200 (451)
..+. ...+..++.+.+.+|
T Consensus 231 ~~~~~~~~l~~L~~L~L~~N 250 (330)
T 1xku_A 231 VDNGSLANTPHLRELHLNNN 250 (330)
T ss_dssp ECTTTGGGSTTCCEEECCSS
T ss_pred eChhhccCCCCCCEEECCCC
Confidence 5442 223344455555444
No 314
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.50 E-value=2.3e-14 Score=139.19 Aligned_cols=142 Identities=23% Similarity=0.300 Sum_probs=66.5
Q ss_pred hhhhhhhhhhccCCCcceE---------EEeecCCccccccCCccccCCCCCCEEeCcCCccC--ccCCccccCCCCCcE
Q 013004 55 ISFLIFIRVLQSSSNLFVY---------LISDLGNAALSGELAPELGQLKNLELLELYGNNLS--GHIPSALGNLIKLKS 123 (451)
Q Consensus 55 ~~~~~~~~~l~~~~n~~~~---------~~~~l~~n~~~g~~p~~l~~l~~L~~L~ls~N~l~--~~~p~~~~~l~~L~~ 123 (451)
++.+..|+.|++++|.+.. ..+++++|.+++..+..++.+++|+.|++++|.++ +..|..+..+ +|+.
T Consensus 98 ~~~l~~L~~L~L~~n~l~~l~~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~ 176 (332)
T 2ft3_A 98 FSPLRKLQKLYISKNHLVEIPPNLPSSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNY 176 (332)
T ss_dssp STTCTTCCEEECCSSCCCSCCSSCCTTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSC
T ss_pred hhCcCCCCEEECCCCcCCccCccccccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCE
Confidence 4444555555555554431 23344555555433333555666666666666653 2344444443 3333
Q ss_pred EeCCCCcCCccCcccccCCcccceeeccccccCCCChhhhhcCCCCCeeccCCccccCcCCC-CCCCCcccccccccc
Q 013004 124 LDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPD-NGSFSQFTPISFENN 200 (451)
Q Consensus 124 L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~-~~~~~~~~~~~~~~n 200 (451)
|++++|+++ .+|..+. ++|+.|++++|.+++..|..+..+++|+.|++++|.+++..|. ...+.+++.+.+.+|
T Consensus 177 L~l~~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 251 (332)
T 2ft3_A 177 LRISEAKLT-GIPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNN 251 (332)
T ss_dssp CBCCSSBCS-SCCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSS
T ss_pred EECcCCCCC-ccCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCC
Confidence 333333333 1222221 3455555555555555555555555555566665555554442 222334444444443
No 315
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.49 E-value=8.5e-15 Score=159.97 Aligned_cols=89 Identities=33% Similarity=0.508 Sum_probs=60.4
Q ss_pred ccccCCCCCcEEeCCCCcCCccCcccccCCcccceeeccccccCCCChhhhhcCCCCCeeccCCccccCcCCCCCCCCcc
Q 013004 113 SALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPDNGSFSQF 192 (451)
Q Consensus 113 ~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~~~~~~~ 192 (451)
..+..+++|+.|+|++|++++..|..+..+++|+.|+|++|++++..|..+. ++|+.||+++|++++.+|.. +..+
T Consensus 474 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~--~~~L 549 (844)
T 3j0a_A 474 DVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDV--FVSL 549 (844)
T ss_dssp SCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCC--CSSC
T ss_pred hhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhH--hCCc
Confidence 4455666677777777777766666667777777777777777665554444 56777777777777766643 5567
Q ss_pred cccccccccccCC
Q 013004 193 TPISFENNLNLCG 205 (451)
Q Consensus 193 ~~~~~~~n~~lCg 205 (451)
..+.+.+|+..|.
T Consensus 550 ~~l~l~~Np~~C~ 562 (844)
T 3j0a_A 550 SVLDITHNKFICE 562 (844)
T ss_dssp CEEEEEEECCCCS
T ss_pred CEEEecCCCcccc
Confidence 7777888887774
No 316
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.49 E-value=1.4e-14 Score=152.30 Aligned_cols=124 Identities=18% Similarity=0.163 Sum_probs=103.0
Q ss_pred eecCCccccccCCccccCCCCCCEEeCcCCccCccCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeecccccc
Q 013004 76 SDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSL 155 (451)
Q Consensus 76 ~~l~~n~~~g~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l 155 (451)
++|++|.+++ ++.++.+++|+.|+|++|.+++.+|..++.+++|+.|+|++|.+++ +|..++.+++|+.|+|++|.+
T Consensus 237 L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l 313 (597)
T 3oja_B 237 LKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHL 313 (597)
T ss_dssp EECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCC
T ss_pred EECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCC
Confidence 4555666655 4678889999999999999998889999999999999999999984 687788899999999999999
Q ss_pred CCCChhhhhcCCCCCeeccCCccccCcCCCCCCCCcccccccccccccCC
Q 013004 156 SGLIPTSLTTITSLNILDLSNNRLSGPVPDNGSFSQFTPISFENNLNLCG 205 (451)
Q Consensus 156 ~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lCg 205 (451)
+ .+|..+..+++|+.|++++|.+++.. ...+..+..+.+.+|+.-|.
T Consensus 314 ~-~i~~~~~~l~~L~~L~L~~N~l~~~~--~~~~~~L~~L~l~~N~~~~~ 360 (597)
T 3oja_B 314 L-HVERNQPQFDRLENLYLDHNSIVTLK--LSTHHTLKNLTLSHNDWDCN 360 (597)
T ss_dssp C-CCGGGHHHHTTCSEEECCSSCCCCCC--CCTTCCCSEEECCSSCEEHH
T ss_pred C-ccCcccccCCCCCEEECCCCCCCCcC--hhhcCCCCEEEeeCCCCCCh
Confidence 8 57888899999999999999998763 34567777788888875553
No 317
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.49 E-value=4.1e-15 Score=161.44 Aligned_cols=151 Identities=22% Similarity=0.315 Sum_probs=108.1
Q ss_pred hcchhhhhhhhhhhhhccCCCcceEE-----EeecCCccccccCCcccc--CCCCCCEEeCcCCccCccCCccccCCCCC
Q 013004 49 EQLHLLISFLIFIRVLQSSSNLFVYL-----ISDLGNAALSGELAPELG--QLKNLELLELYGNNLSGHIPSALGNLIKL 121 (451)
Q Consensus 49 ~~l~~~~~~~~~~~~l~~~~n~~~~~-----~~~l~~n~~~g~~p~~l~--~l~~L~~L~ls~N~l~~~~p~~~~~l~~L 121 (451)
..+|..++.+..|+.|++++|.++.. ...++.|.+.|.+|++++ ++++|+.|+|++|++.+.+|..++++++|
T Consensus 438 ~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L 517 (876)
T 4ecn_A 438 TFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPEL 517 (876)
T ss_dssp EEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSC
T ss_pred cchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCC
Confidence 33777777788888888887776540 111223445556788877 78888888888888888888888888888
Q ss_pred cEEeCCCCc-CCc-cCcccccCCc-------ccceeeccccccCCCChh--hhhcCCCCCeeccCCccccCcCCCCCCCC
Q 013004 122 KSLDLYSNL-FNG-TIPDTLANLK-------QLKYLRLNNNSLSGLIPT--SLTTITSLNILDLSNNRLSGPVPDNGSFS 190 (451)
Q Consensus 122 ~~L~ls~N~-l~g-~~p~~~~~l~-------~L~~L~ls~N~l~~~~p~--~~~~l~~L~~l~ls~N~l~~~~p~~~~~~ 190 (451)
+.|+|++|+ ++| .+|..+++++ +|+.|+|++|+++ .+|. .++.+++|+.|++++|.++ .+|..+.+.
T Consensus 518 ~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp~~~~L~ 595 (876)
T 4ecn_A 518 QSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLEAFGTNV 595 (876)
T ss_dssp CEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCCCCCTTS
T ss_pred CEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cchhhcCCC
Confidence 888888887 777 7777666665 7888888888887 6676 7778888888888888877 666555556
Q ss_pred ccccccccccc
Q 013004 191 QFTPISFENNL 201 (451)
Q Consensus 191 ~~~~~~~~~n~ 201 (451)
.+..+.+.+|.
T Consensus 596 ~L~~L~Ls~N~ 606 (876)
T 4ecn_A 596 KLTDLKLDYNQ 606 (876)
T ss_dssp EESEEECCSSC
T ss_pred cceEEECcCCc
Confidence 66666665553
No 318
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.49 E-value=2.7e-14 Score=149.99 Aligned_cols=110 Identities=20% Similarity=0.173 Sum_probs=57.6
Q ss_pred hhhcchhh-hhhhhhhhhhccCCCcceEE------------EeecCCccccccCCccccCCCCCCEEeCcCCccCccCCc
Q 013004 47 ECEQLHLL-ISFLIFIRVLQSSSNLFVYL------------ISDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPS 113 (451)
Q Consensus 47 ~~~~l~~~-~~~~~~~~~l~~~~n~~~~~------------~~~l~~n~~~g~~p~~l~~l~~L~~L~ls~N~l~~~~p~ 113 (451)
.+..+|.. ++.++.|+.|++++|.+... .++|++|.+++..|..++.+++|+.|+|++|.+++..|.
T Consensus 62 ~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~ 141 (597)
T 3oja_B 62 TMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRG 141 (597)
T ss_dssp EESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTT
T ss_pred CCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHH
Confidence 34444443 24455555566555544332 345555555554444455566666666666655533333
Q ss_pred cccCCCCCcEEeCCCCcCCccCcccccCCcccceeeccccccC
Q 013004 114 ALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLS 156 (451)
Q Consensus 114 ~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~ 156 (451)
.|+.+++|+.|+|++|.+++..|..++.+++|+.|+|++|.++
T Consensus 142 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 184 (597)
T 3oja_B 142 IFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLT 184 (597)
T ss_dssp TTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCS
T ss_pred HhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCC
Confidence 3455555666666655555555555555555555555555544
No 319
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.49 E-value=5.3e-14 Score=138.45 Aligned_cols=127 Identities=25% Similarity=0.224 Sum_probs=109.0
Q ss_pred EEeecCCccccccCCcccc-CCCCCCEEeCcCCccCccCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeeccc
Q 013004 74 LISDLGNAALSGELAPELG-QLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNN 152 (451)
Q Consensus 74 ~~~~l~~n~~~g~~p~~l~-~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~ 152 (451)
..++|++|.+++..+..+. .+++|+.|+|++|++++..|..|..+++|+.|+|++|++++..+..|..+++|+.|+|++
T Consensus 42 ~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 121 (361)
T 2xot_A 42 ALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYN 121 (361)
T ss_dssp SEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCC
Confidence 4579999999986666676 899999999999999987778899999999999999999977777899999999999999
Q ss_pred cccCCCChhhhhcCCCCCeeccCCccccCcCCCC----CCCCcccccccccc
Q 013004 153 NSLSGLIPTSLTTITSLNILDLSNNRLSGPVPDN----GSFSQFTPISFENN 200 (451)
Q Consensus 153 N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~----~~~~~~~~~~~~~n 200 (451)
|++++..|..|..+++|+.|++++|.+++.++.. ..+.++..+.+.+|
T Consensus 122 N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N 173 (361)
T 2xot_A 122 NHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSN 173 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSS
T ss_pred CcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCC
Confidence 9999888999999999999999999999754432 23556666666665
No 320
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.48 E-value=1.7e-14 Score=139.06 Aligned_cols=163 Identities=20% Similarity=0.175 Sum_probs=114.8
Q ss_pred ceEEEeehhHHHhhhhcchhhhhhhhhhhhhccCCCcce--------------------EEEeecCCccccccCCccc--
Q 013004 34 GFTLLVTLKAVLQECEQLHLLISFLIFIRVLQSSSNLFV--------------------YLISDLGNAALSGELAPEL-- 91 (451)
Q Consensus 34 ~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~l~~~~n~~~--------------------~~~~~l~~n~~~g~~p~~l-- 91 (451)
+...+..+...-+.+ .+|..+... ++.|++++|.+. +..++|++|.+++.+|..+
T Consensus 41 ~~~~L~~l~l~~n~l-~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 117 (312)
T 1wwl_A 41 GGRSLEYLLKRVDTE-ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLE 117 (312)
T ss_dssp EEEECTTHHHHCCTT-CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSS
T ss_pred cCCCceeEeeccccc-ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHH
Confidence 345566665555566 667655443 888888888773 2356777888888888876
Q ss_pred cCCCCCCEEeCcCCccCccCCccccCC-----CCCcEEeCCCCcCCccCcccccCCcccceeeccccccCCC--Chhhh-
Q 013004 92 GQLKNLELLELYGNNLSGHIPSALGNL-----IKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGL--IPTSL- 163 (451)
Q Consensus 92 ~~l~~L~~L~ls~N~l~~~~p~~~~~l-----~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~--~p~~~- 163 (451)
+.+++|+.|+|++|++++. |..++.+ ++|++|+|++|++++..|..++.+++|++|++++|++.+. .|..+
T Consensus 118 ~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~ 196 (312)
T 1wwl_A 118 ATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALC 196 (312)
T ss_dssp CCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSC
T ss_pred hcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHH
Confidence 7888888888888888866 7777776 7888888888888877777888888888888888887664 24444
Q ss_pred -hcCCCCCeeccCCccccCc--CCCC--CCCCcccccccccc
Q 013004 164 -TTITSLNILDLSNNRLSGP--VPDN--GSFSQFTPISFENN 200 (451)
Q Consensus 164 -~~l~~L~~l~ls~N~l~~~--~p~~--~~~~~~~~~~~~~n 200 (451)
..+++|+.|++++|.+++. ++.. ..+..+..+.+.+|
T Consensus 197 ~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N 238 (312)
T 1wwl_A 197 PLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHN 238 (312)
T ss_dssp TTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTS
T ss_pred hccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCC
Confidence 7778888888888888742 2211 12345555555555
No 321
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.48 E-value=3e-14 Score=138.38 Aligned_cols=161 Identities=21% Similarity=0.222 Sum_probs=96.9
Q ss_pred ceEEEeehhHHHhhhhcchhhhhhhhhhhhhccCCCcceE------------EEeecCCcccc--ccCCccccCCCCCCE
Q 013004 34 GFTLLVTLKAVLQECEQLHLLISFLIFIRVLQSSSNLFVY------------LISDLGNAALS--GELAPELGQLKNLEL 99 (451)
Q Consensus 34 ~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~l~~~~n~~~~------------~~~~l~~n~~~--g~~p~~l~~l~~L~~ 99 (451)
++..|+.|....+.+..+|..+. ..|+.|++++|.+.. ..+++++|.++ +..|..+..+ +|+.
T Consensus 100 ~l~~L~~L~L~~n~l~~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~ 176 (332)
T 2ft3_A 100 PLRKLQKLYISKNHLVEIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNY 176 (332)
T ss_dssp TCTTCCEEECCSSCCCSCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSC
T ss_pred CcCCCCEEECCCCcCCccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCE
Confidence 44555555555555666665443 567777777765542 23566667664 3556666666 6777
Q ss_pred EeCcCCccCccCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeeccccccCCCChhhhhcCCCCCeeccCCccc
Q 013004 100 LELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSNNRL 179 (451)
Q Consensus 100 L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l 179 (451)
|++++|++++ +|..+. ++|+.|++++|.+++..|..+..+++|+.|++++|++++..|..+..+++|+.|++++|++
T Consensus 177 L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 253 (332)
T 2ft3_A 177 LRISEAKLTG-IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKL 253 (332)
T ss_dssp CBCCSSBCSS-CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCC
T ss_pred EECcCCCCCc-cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcC
Confidence 7777777663 555443 5666666777766655556666666666677776666665555666666666677766666
Q ss_pred cCcCCCCCCCCcccccccccc
Q 013004 180 SGPVPDNGSFSQFTPISFENN 200 (451)
Q Consensus 180 ~~~~p~~~~~~~~~~~~~~~n 200 (451)
+..++....+..+..+.+.+|
T Consensus 254 ~~lp~~l~~l~~L~~L~l~~N 274 (332)
T 2ft3_A 254 SRVPAGLPDLKLLQVVYLHTN 274 (332)
T ss_dssp CBCCTTGGGCTTCCEEECCSS
T ss_pred eecChhhhcCccCCEEECCCC
Confidence 632222333444555555554
No 322
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.48 E-value=1.8e-14 Score=154.35 Aligned_cols=107 Identities=27% Similarity=0.430 Sum_probs=80.6
Q ss_pred EeecCCccccccCCccccCCCCCCEEeCcCCccCccCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeeccccc
Q 013004 75 ISDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNS 154 (451)
Q Consensus 75 ~~~l~~n~~~g~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~ 154 (451)
.++|++|.+. .+|+.++.+++|+.|+|++|.|+ .+|..|+.|++|+.|+|++|+|+ .+|..|++|++|++|+|++|.
T Consensus 228 ~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~ 304 (727)
T 4b8c_D 228 ALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNM 304 (727)
T ss_dssp EEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSC
T ss_pred EEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCC
Confidence 4566666666 57777777777777888777777 77777777777888888887777 677777777777788887777
Q ss_pred cCCCChhhhhcCCCCCeeccCCccccCcCCC
Q 013004 155 LSGLIPTSLTTITSLNILDLSNNRLSGPVPD 185 (451)
Q Consensus 155 l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~ 185 (451)
++ .+|..|+.+++|+.|+|++|+|++.+|.
T Consensus 305 l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~ 334 (727)
T 4b8c_D 305 VT-TLPWEFGNLCNLQFLGVEGNPLEKQFLK 334 (727)
T ss_dssp CC-CCCSSTTSCTTCCCEECTTSCCCSHHHH
T ss_pred CC-ccChhhhcCCCccEEeCCCCccCCCChH
Confidence 76 5676777777777777777777776664
No 323
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.47 E-value=1.4e-14 Score=147.92 Aligned_cols=151 Identities=20% Similarity=0.200 Sum_probs=108.6
Q ss_pred hhhhhhhhhhccCCCcceE------------EEeecCCccccccCCccccCCCCCCEEeCcCCccCccCCccccCCCCCc
Q 013004 55 ISFLIFIRVLQSSSNLFVY------------LISDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLK 122 (451)
Q Consensus 55 ~~~~~~~~~l~~~~n~~~~------------~~~~l~~n~~~g~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~ 122 (451)
+..+..|+.|++++|.+.. ..+++++|.+.+.+|+.+....+|+.|++++|++++..+..+..+++|+
T Consensus 172 l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 251 (477)
T 2id5_A 172 LSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLR 251 (477)
T ss_dssp HTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCC
T ss_pred hcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccccC
Confidence 4455566666666655433 2345566666666666666666777788888888744335678888888
Q ss_pred EEeCCCCcCCccCcccccCCcccceeeccccccCCCChhhhhcCCCCCeeccCCccccCcCCCC-CCCCccccccccccc
Q 013004 123 SLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPDN-GSFSQFTPISFENNL 201 (451)
Q Consensus 123 ~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~-~~~~~~~~~~~~~n~ 201 (451)
.|+|++|.+++..+..+..+++|+.|+|++|++++..|..+..+++|+.|++++|++++..+.. ..+.++..+.+.+|+
T Consensus 252 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 331 (477)
T 2id5_A 252 FLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNP 331 (477)
T ss_dssp EEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSC
T ss_pred eeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCC
Confidence 8888888888777777888888888888888888877888888888888888888888765532 345566777777777
Q ss_pred ccCC
Q 013004 202 NLCG 205 (451)
Q Consensus 202 ~lCg 205 (451)
..|.
T Consensus 332 l~c~ 335 (477)
T 2id5_A 332 LACD 335 (477)
T ss_dssp EECS
T ss_pred ccCc
Confidence 6654
No 324
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.47 E-value=7.1e-14 Score=141.21 Aligned_cols=141 Identities=23% Similarity=0.272 Sum_probs=76.8
Q ss_pred hhhhhhccCCCcceEE------------EeecCCccccccCCccccCCCCCCEEeCcCCccCccCCccccCCCCCcEEeC
Q 013004 59 IFIRVLQSSSNLFVYL------------ISDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDL 126 (451)
Q Consensus 59 ~~~~~l~~~~n~~~~~------------~~~l~~n~~~g~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l 126 (451)
..++.|++++|.+... .++|++|.+++..+..+..+++|+.|+|++|++++..+..+..+++|+.|+|
T Consensus 64 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 143 (440)
T 3zyj_A 64 TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWL 143 (440)
T ss_dssp TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEEC
T ss_pred CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeC
Confidence 3455566665554432 3456666666555555666666666666666666444445666666666666
Q ss_pred CCCcCCccCcccccCCcccceeecccc-ccCCCChhhhhcCCCCCeeccCCccccCcCCCCCCCCcccccccccc
Q 013004 127 YSNLFNGTIPDTLANLKQLKYLRLNNN-SLSGLIPTSLTTITSLNILDLSNNRLSGPVPDNGSFSQFTPISFENN 200 (451)
Q Consensus 127 s~N~l~g~~p~~~~~l~~L~~L~ls~N-~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n 200 (451)
++|.+++..+..|.++++|+.|+|++| .+....+..+..+++|+.|++++|.++. +|....+.+++.+.+.+|
T Consensus 144 ~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~l~~L~~L~Ls~N 217 (440)
T 3zyj_A 144 RNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLRE-IPNLTPLIKLDELDLSGN 217 (440)
T ss_dssp CSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSS-CCCCTTCSSCCEEECTTS
T ss_pred CCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcc-ccccCCCcccCEEECCCC
Confidence 666666444445555555666666553 2322222345555555555555555552 333344444444444443
No 325
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.47 E-value=3.2e-14 Score=124.10 Aligned_cols=104 Identities=27% Similarity=0.294 Sum_probs=89.4
Q ss_pred eecCCccccccCCccccCCCCCCEEeCcCCccCccCCccccCCCCCcEEeCCCCcCCccCc--ccccCCcccceeecccc
Q 013004 76 SDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIP--DTLANLKQLKYLRLNNN 153 (451)
Q Consensus 76 ~~l~~n~~~g~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p--~~~~~l~~L~~L~ls~N 153 (451)
++|++|.+++. ..++.+++|+.|++++|++++.+|..+..+++|+.|++++|.+++ +| ..++.+++|+.|++++|
T Consensus 54 L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~~~~~l~~l~~L~~L~l~~N 130 (168)
T 2ell_A 54 LSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNLSGNKLKD-ISTLEPLKKLECLKSLDLFNC 130 (168)
T ss_dssp EEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEECBSSSCCS-SGGGGGGSSCSCCCEEECCSS
T ss_pred EeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEeccCCccCc-chhHHHHhcCCCCCEEEeeCC
Confidence 34455555543 678899999999999999998889888889999999999999985 44 78999999999999999
Q ss_pred ccCCCCh---hhhhcCCCCCeeccCCccccCc
Q 013004 154 SLSGLIP---TSLTTITSLNILDLSNNRLSGP 182 (451)
Q Consensus 154 ~l~~~~p---~~~~~l~~L~~l~ls~N~l~~~ 182 (451)
.+++..+ ..+..+++|+.|++++|.+...
T Consensus 131 ~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~ 162 (168)
T 2ell_A 131 EVTNLNDYRESVFKLLPQLTYLDGYDREDQEA 162 (168)
T ss_dssp GGGTSTTHHHHHHTTCSSCCEETTEETTSCBC
T ss_pred cCcchHHHHHHHHHhCccCcEecCCCCChhhc
Confidence 9997655 5899999999999999988754
No 326
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.47 E-value=7.6e-14 Score=146.85 Aligned_cols=109 Identities=24% Similarity=0.277 Sum_probs=65.4
Q ss_pred eecCCccccccCCccccCCCCCCEEeCcCCccCccCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeecccccc
Q 013004 76 SDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSL 155 (451)
Q Consensus 76 ~~l~~n~~~g~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l 155 (451)
++|++|.+++-.|..|.+|++|++|+|++|++++..|..|.++++|+.|+|++|++++..|..|+++++|++|+|++|.+
T Consensus 81 L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l 160 (635)
T 4g8a_A 81 LDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLI 160 (635)
T ss_dssp EECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCC
T ss_pred EECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCcc
Confidence 34444555443344466666666666666666654445566666666666666666644444566666666666666666
Q ss_pred CC-CChhhhhcCCCCCeeccCCccccCcCC
Q 013004 156 SG-LIPTSLTTITSLNILDLSNNRLSGPVP 184 (451)
Q Consensus 156 ~~-~~p~~~~~l~~L~~l~ls~N~l~~~~p 184 (451)
++ .+|..++.+++|+.|++++|++++..|
T Consensus 161 ~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 190 (635)
T 4g8a_A 161 QSFKLPEYFSNLTNLEHLDLSSNKIQSIYC 190 (635)
T ss_dssp CCCCCCGGGGGCTTCCEEECCSSCCCEECG
T ss_pred ccCCCchhhccchhhhhhcccCcccccccc
Confidence 54 245566666666666666666665444
No 327
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.47 E-value=8.2e-14 Score=142.13 Aligned_cols=161 Identities=16% Similarity=0.146 Sum_probs=106.5
Q ss_pred eehhHHHhhhhcch-hhhhhhhhhhhhccCCCcceEE------------EeecCCccccccCCccccCCCCCCEEeCcCC
Q 013004 39 VTLKAVLQECEQLH-LLISFLIFIRVLQSSSNLFVYL------------ISDLGNAALSGELAPELGQLKNLELLELYGN 105 (451)
Q Consensus 39 ~~l~~~~~~~~~l~-~~~~~~~~~~~l~~~~n~~~~~------------~~~l~~n~~~g~~p~~l~~l~~L~~L~ls~N 105 (451)
..|....+.+..++ ..+..+..|+.|++++|.+... .++|++|.+++..+..++.+++|+.|+|++|
T Consensus 35 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n 114 (477)
T 2id5_A 35 RLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISEN 114 (477)
T ss_dssp SEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTS
T ss_pred cEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCC
Confidence 33444444555553 3466677777777777765432 4566677776533344677777777777777
Q ss_pred ccCccCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeeccccccCCCChhhhhcCCCCCeeccCCccccCcCCC
Q 013004 106 NLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPD 185 (451)
Q Consensus 106 ~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~ 185 (451)
.+++..|..+..+++|+.|++++|.+++..|..|+++++|+.|+|++|++++..+..+..+++|+.|++++|.+++..+.
T Consensus 115 ~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~ 194 (477)
T 2id5_A 115 KIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDY 194 (477)
T ss_dssp CCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTT
T ss_pred ccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChh
Confidence 77777777777777777777777777766677777777778888887777766666777777777777777777765442
Q ss_pred -CCCCCccccccccc
Q 013004 186 -NGSFSQFTPISFEN 199 (451)
Q Consensus 186 -~~~~~~~~~~~~~~ 199 (451)
...+..+..+.+.+
T Consensus 195 ~~~~l~~L~~L~l~~ 209 (477)
T 2id5_A 195 SFKRLYRLKVLEISH 209 (477)
T ss_dssp CSCSCTTCCEEEEEC
T ss_pred hcccCcccceeeCCC
Confidence 22333444444443
No 328
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.46 E-value=3.2e-14 Score=141.38 Aligned_cols=122 Identities=18% Similarity=0.171 Sum_probs=75.8
Q ss_pred ecCCccccccCCccccCCCCCCEEeCcCCccCccCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeeccccccC
Q 013004 77 DLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLS 156 (451)
Q Consensus 77 ~l~~n~~~g~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~ 156 (451)
++++|.+++ ++.++.+++|+.|++++|.+++..|..+..+++|+.|++++|+++ .+|..+..+++|+.|++++|+++
T Consensus 232 ~l~~n~l~~--~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~n~l~ 308 (390)
T 3o6n_A 232 KLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLV-ALNLYGQPIPTLKVLDLSHNHLL 308 (390)
T ss_dssp ECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCC-EEECSSSCCTTCCEEECCSSCCC
T ss_pred ECCCCCCcc--cHHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCc-ccCcccCCCCCCCEEECCCCcce
Confidence 344444443 244566667777777777776666666777777777777777776 35555666677777777777776
Q ss_pred CCChhhhhcCCCCCeeccCCccccCcCCCCCCCCcccccccccccccC
Q 013004 157 GLIPTSLTTITSLNILDLSNNRLSGPVPDNGSFSQFTPISFENNLNLC 204 (451)
Q Consensus 157 ~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lC 204 (451)
.+|..+..+++|+.|++++|+++... ...+..+..+.+.+|+--|
T Consensus 309 -~~~~~~~~l~~L~~L~L~~N~i~~~~--~~~~~~L~~L~l~~N~~~~ 353 (390)
T 3o6n_A 309 -HVERNQPQFDRLENLYLDHNSIVTLK--LSTHHTLKNLTLSHNDWDC 353 (390)
T ss_dssp -CCGGGHHHHTTCSEEECCSSCCCCCC--CCTTCCCSEEECCSSCEEH
T ss_pred -ecCccccccCcCCEEECCCCccceeC--chhhccCCEEEcCCCCccc
Confidence 35666666677777777777766542 2345555666666665433
No 329
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.46 E-value=5.3e-14 Score=134.21 Aligned_cols=153 Identities=25% Similarity=0.283 Sum_probs=84.0
Q ss_pred EeehhHHHhhhhcchhhhhhhhhhhhhccCCCcceE----------EEeecCCccccccCCccccCCCCCCEEeCcCCcc
Q 013004 38 LVTLKAVLQECEQLHLLISFLIFIRVLQSSSNLFVY----------LISDLGNAALSGELAPELGQLKNLELLELYGNNL 107 (451)
Q Consensus 38 ~~~l~~~~~~~~~l~~~~~~~~~~~~l~~~~n~~~~----------~~~~l~~n~~~g~~p~~l~~l~~L~~L~ls~N~l 107 (451)
+..|....+.+..++. +..+..++.|++++|.+.. ..++|++|.+++ ++.++.+++|+.|++++|++
T Consensus 48 L~~L~l~~~~i~~~~~-~~~l~~L~~L~L~~n~l~~~~~l~~l~~L~~L~l~~n~l~~--~~~l~~l~~L~~L~L~~n~i 124 (291)
T 1h6t_A 48 IDQIIANNSDIKSVQG-IQYLPNVTKLFLNGNKLTDIKPLANLKNLGWLFLDENKVKD--LSSLKDLKKLKSLSLEHNGI 124 (291)
T ss_dssp CCEEECTTSCCCCCTT-GGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCC--GGGGTTCTTCCEEECTTSCC
T ss_pred ccEEEccCCCcccChh-HhcCCCCCEEEccCCccCCCcccccCCCCCEEECCCCcCCC--ChhhccCCCCCEEECCCCcC
Confidence 3333333334444432 4555666666666665442 234555555544 23366666666666666666
Q ss_pred CccCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeeccccccCCCChhhhhcCCCCCeeccCCccccCcCCCCC
Q 013004 108 SGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPDNG 187 (451)
Q Consensus 108 ~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~~ 187 (451)
++ + +.+..+++|+.|++++|++++. +.++.+++|+.|++++|++++..| +..+++|+.|++++|.+++. |...
T Consensus 125 ~~-~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~l-~~l~ 197 (291)
T 1h6t_A 125 SD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL-RALA 197 (291)
T ss_dssp CC-C-GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC-GGGT
T ss_pred CC-C-hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCCCC-hhhc
Confidence 64 2 3456666666666666666533 345666666666666666665433 66666666666666666553 3334
Q ss_pred CCCcccccccccc
Q 013004 188 SFSQFTPISFENN 200 (451)
Q Consensus 188 ~~~~~~~~~~~~n 200 (451)
.+..+..+.+.+|
T Consensus 198 ~l~~L~~L~l~~n 210 (291)
T 1h6t_A 198 GLKNLDVLELFSQ 210 (291)
T ss_dssp TCTTCSEEEEEEE
T ss_pred cCCCCCEEECcCC
Confidence 4445555555554
No 330
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.46 E-value=2e-14 Score=132.95 Aligned_cols=161 Identities=19% Similarity=0.187 Sum_probs=116.7
Q ss_pred EeehhHHHhhhhcchh-hhhhhhhhhhhccCCCc-ceE------------EEeecCC-ccccccCCccccCCCCCCEEeC
Q 013004 38 LVTLKAVLQECEQLHL-LISFLIFIRVLQSSSNL-FVY------------LISDLGN-AALSGELAPELGQLKNLELLEL 102 (451)
Q Consensus 38 ~~~l~~~~~~~~~l~~-~~~~~~~~~~l~~~~n~-~~~------------~~~~l~~-n~~~g~~p~~l~~l~~L~~L~l 102 (451)
+..|....+.+..++. .++.+..|+.|++++|. +.. ..++|++ |.+++..+..+..+++|+.|++
T Consensus 33 l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l 112 (239)
T 2xwt_C 33 TQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGI 112 (239)
T ss_dssp CCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEE
T ss_pred ccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeC
Confidence 3444444455666666 56778888999998885 543 2456777 8888655567888999999999
Q ss_pred cCCccCccCCccccCCCCCc---EEeCCCC-cCCccCcccccCCcccc-eeeccccccCCCChhhhhcCCCCCeeccCCc
Q 013004 103 YGNNLSGHIPSALGNLIKLK---SLDLYSN-LFNGTIPDTLANLKQLK-YLRLNNNSLSGLIPTSLTTITSLNILDLSNN 177 (451)
Q Consensus 103 s~N~l~~~~p~~~~~l~~L~---~L~ls~N-~l~g~~p~~~~~l~~L~-~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N 177 (451)
++|.+++ +|. ++.+++|+ .|++++| ++++..+..|..+++|+ .|++++|+++ .+|......++|+.|++++|
T Consensus 113 ~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~~~L~~L~L~~n 189 (239)
T 2xwt_C 113 FNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNGTKLDAVYLNKN 189 (239)
T ss_dssp EEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTTCEEEEEECTTC
T ss_pred CCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCCCCCCEEEcCCC
Confidence 9999985 776 88888888 9999999 88866666788899999 9999999998 44544333378999999999
Q ss_pred c-ccCcCCCC-CCC-Cccccccccccc
Q 013004 178 R-LSGPVPDN-GSF-SQFTPISFENNL 201 (451)
Q Consensus 178 ~-l~~~~p~~-~~~-~~~~~~~~~~n~ 201 (451)
+ +++..+.. ..+ ..+..+.+.+|.
T Consensus 190 ~~l~~i~~~~~~~l~~~L~~L~l~~N~ 216 (239)
T 2xwt_C 190 KYLTVIDKDAFGGVYSGPSLLDVSQTS 216 (239)
T ss_dssp TTCCEECTTTTTTCSBCCSEEECTTCC
T ss_pred CCcccCCHHHhhccccCCcEEECCCCc
Confidence 4 87655442 334 566666666653
No 331
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.45 E-value=5.2e-14 Score=135.39 Aligned_cols=144 Identities=23% Similarity=0.378 Sum_probs=76.8
Q ss_pred hhhcchhhhhhhhhhhhhccCCCcce----------EEEeecCCccccccCCccccCCCCCCEEeCcCCccCccCCcccc
Q 013004 47 ECEQLHLLISFLIFIRVLQSSSNLFV----------YLISDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALG 116 (451)
Q Consensus 47 ~~~~l~~~~~~~~~~~~l~~~~n~~~----------~~~~~l~~n~~~g~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~ 116 (451)
.+..++ .+..+..|+.|++++|.+. +..++|++|.+++ + +.++.+++|+.|++++|++++ +|. +.
T Consensus 52 ~i~~l~-~~~~l~~L~~L~L~~n~i~~~~~~~~l~~L~~L~L~~n~l~~-~-~~~~~l~~L~~L~l~~n~l~~-~~~-l~ 126 (308)
T 1h6u_A 52 GVTTIE-GVQYLNNLIGLELKDNQITDLAPLKNLTKITELELSGNPLKN-V-SAIAGLQSIKTLDLTSTQITD-VTP-LA 126 (308)
T ss_dssp CCCCCT-TGGGCTTCCEEECCSSCCCCCGGGTTCCSCCEEECCSCCCSC-C-GGGTTCTTCCEEECTTSCCCC-CGG-GT
T ss_pred CccCch-hhhccCCCCEEEccCCcCCCChhHccCCCCCEEEccCCcCCC-c-hhhcCCCCCCEEECCCCCCCC-chh-hc
Confidence 334443 2444555555555555443 2234555555554 2 345666666666666666664 332 56
Q ss_pred CCCCCcEEeCCCCcCCccCcccccCCcccceeeccccccCCCChhhhhcCCCCCeeccCCccccCcCCCCCCCCcccccc
Q 013004 117 NLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPDNGSFSQFTPIS 196 (451)
Q Consensus 117 ~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~ 196 (451)
.+++|+.|++++|++++ +|. ++.+++|+.|++++|++++. |. +..+++|+.|++++|.+++..+ ...+..+..+.
T Consensus 127 ~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~-~~-l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~ 201 (308)
T 1h6u_A 127 GLSNLQVLYLDLNQITN-ISP-LAGLTNLQYLSIGNAQVSDL-TP-LANLSKLTTLKADDNKISDISP-LASLPNLIEVH 201 (308)
T ss_dssp TCTTCCEEECCSSCCCC-CGG-GGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCCCGG-GGGCTTCCEEE
T ss_pred CCCCCCEEECCCCccCc-Ccc-ccCCCCccEEEccCCcCCCC-hh-hcCCCCCCEEECCCCccCcChh-hcCCCCCCEEE
Confidence 66666666666666653 332 55666666666666666543 32 5566666666666666655433 23334444444
Q ss_pred cccc
Q 013004 197 FENN 200 (451)
Q Consensus 197 ~~~n 200 (451)
+.+|
T Consensus 202 L~~N 205 (308)
T 1h6u_A 202 LKNN 205 (308)
T ss_dssp CTTS
T ss_pred ccCC
Confidence 4444
No 332
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.45 E-value=7.8e-15 Score=157.26 Aligned_cols=131 Identities=27% Similarity=0.343 Sum_probs=106.7
Q ss_pred hhhhhhhhhhhhccCCCcceE-----------EEeecCCccccccCCccccCCCCCCEEeCcCCccCccCCccccCCCCC
Q 013004 53 LLISFLIFIRVLQSSSNLFVY-----------LISDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKL 121 (451)
Q Consensus 53 ~~~~~~~~~~~l~~~~n~~~~-----------~~~~l~~n~~~g~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L 121 (451)
..+..+..|+.|++++|.+.. ..++|++|.++ .+|.+++.|++|+.|+|++|+|+ .+|..|+.|++|
T Consensus 218 ~~~~~l~~L~~L~Ls~n~l~~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L 295 (727)
T 4b8c_D 218 DSKYDDQLWHALDLSNLQIFNISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQL 295 (727)
T ss_dssp ----CCCCCCEEECTTSCCSCCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTC
T ss_pred hhhccCCCCcEEECCCCCCCCCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCC
Confidence 334445556666666665432 23466677777 79999999999999999999999 889999999999
Q ss_pred cEEeCCCCcCCccCcccccCCcccceeeccccccCCCChhhhhcCCC-CCeeccCCccccCcCCCC
Q 013004 122 KSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITS-LNILDLSNNRLSGPVPDN 186 (451)
Q Consensus 122 ~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~-L~~l~ls~N~l~~~~p~~ 186 (451)
+.|+|++|.|+ .+|..|++|++|+.|+|++|.|++.+|..+..+.. +..+++++|.++|.+|..
T Consensus 296 ~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~ 360 (727)
T 4b8c_D 296 KYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE 360 (727)
T ss_dssp SEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_pred CEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccc
Confidence 99999999997 89999999999999999999999999988876532 245789999999999864
No 333
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.45 E-value=1.1e-14 Score=124.41 Aligned_cols=99 Identities=26% Similarity=0.290 Sum_probs=84.8
Q ss_pred eecCCccccccCCccccCCCCCCEEeCcCCccCccCCccccCCCCCcEEeCCCCcCCcc-CcccccCCcccceeeccccc
Q 013004 76 SDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGT-IPDTLANLKQLKYLRLNNNS 154 (451)
Q Consensus 76 ~~l~~n~~~g~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~-~p~~~~~l~~L~~L~ls~N~ 154 (451)
+++++|.+++. +.++.+++|+.|++++|.+++.+|..+..+++|+.|++++|.+++. .|..++.+++|++|++++|+
T Consensus 47 L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~ 124 (149)
T 2je0_A 47 LSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCE 124 (149)
T ss_dssp EECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEECTTSCCCSHHHHGGGGGCTTCCEEECTTCG
T ss_pred EECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEECCCCcCCChHHHHHHhhCCCCCEEeCcCCc
Confidence 34455555543 6788999999999999999988998888899999999999999863 34889999999999999999
Q ss_pred cCCCCh---hhhhcCCCCCeeccCC
Q 013004 155 LSGLIP---TSLTTITSLNILDLSN 176 (451)
Q Consensus 155 l~~~~p---~~~~~l~~L~~l~ls~ 176 (451)
+++..+ ..+..+++|+.||+++
T Consensus 125 l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 125 VTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp GGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred ccchHHHHHHHHHHCCCcccccCCC
Confidence 998766 5899999999999874
No 334
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.45 E-value=6e-15 Score=144.63 Aligned_cols=150 Identities=15% Similarity=0.123 Sum_probs=117.4
Q ss_pred cceEEEeehhHHHhhhhcch-hhhhhhhhhhhhccCCCcceE------------EEeecCCccccccCCc--cccCCCCC
Q 013004 33 RGFTLLVTLKAVLQECEQLH-LLISFLIFIRVLQSSSNLFVY------------LISDLGNAALSGELAP--ELGQLKNL 97 (451)
Q Consensus 33 ~~~~~~~~l~~~~~~~~~l~-~~~~~~~~~~~l~~~~n~~~~------------~~~~l~~n~~~g~~p~--~l~~l~~L 97 (451)
.++..|+.|....+.+..++ ..++.+..|+.|++++|.++. ..++|++|.+++ +|. .+..+++|
T Consensus 73 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-l~~~~~~~~l~~L 151 (353)
T 2z80_A 73 QRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKT-LGETSLFSHLTKL 151 (353)
T ss_dssp TTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSS-SCSSCSCTTCTTC
T ss_pred ccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcc-cCchhhhccCCCC
Confidence 45566666666666677764 347788899999999887653 356788888884 665 68889999
Q ss_pred CEEeCcCC-ccCccCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeeccccccCCCChh-hhhcCCCCCeeccC
Q 013004 98 ELLELYGN-NLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPT-SLTTITSLNILDLS 175 (451)
Q Consensus 98 ~~L~ls~N-~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~-~~~~l~~L~~l~ls 175 (451)
+.|++++| .+++..|..+..+++|+.|++++|.+++..|..++++++|++|++++|++.. +|. .+..+++|+.|+++
T Consensus 152 ~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~-~~~~~~~~~~~L~~L~L~ 230 (353)
T 2z80_A 152 QILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHIL-LLEIFVDVTSSVECLELR 230 (353)
T ss_dssp CEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTT-HHHHHHHHTTTEEEEEEE
T ss_pred cEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCcccc-chhhhhhhcccccEEECC
Confidence 99999998 4776667789999999999999999998889999999999999999888864 444 44557788888888
Q ss_pred CccccCcCC
Q 013004 176 NNRLSGPVP 184 (451)
Q Consensus 176 ~N~l~~~~p 184 (451)
+|.+++..+
T Consensus 231 ~n~l~~~~~ 239 (353)
T 2z80_A 231 DTDLDTFHF 239 (353)
T ss_dssp SCBCTTCCC
T ss_pred CCccccccc
Confidence 888876543
No 335
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.45 E-value=4.1e-14 Score=150.77 Aligned_cols=167 Identities=25% Similarity=0.238 Sum_probs=97.1
Q ss_pred ceEEEeehhHHHhhhh-cch-hhhhhhhhhhhhccCCCcceE------------EEeecCCcccc--ccCCccccCCCCC
Q 013004 34 GFTLLVTLKAVLQECE-QLH-LLISFLIFIRVLQSSSNLFVY------------LISDLGNAALS--GELAPELGQLKNL 97 (451)
Q Consensus 34 ~~~~~~~l~~~~~~~~-~l~-~~~~~~~~~~~l~~~~n~~~~------------~~~~l~~n~~~--g~~p~~l~~l~~L 97 (451)
++..|..|....+.+. .++ ..+..+..|+.|++++|.+.. ..+++++|.+. +.+|..++.+++|
T Consensus 403 ~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L 482 (680)
T 1ziw_A 403 WLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNL 482 (680)
T ss_dssp TCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTC
T ss_pred CCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCC
Confidence 3444555554444443 233 345667777888888776542 23456666654 4566777777777
Q ss_pred CEEeCcCCccCccCCccccCCCCCcEEeCCCCcCCccC----c----ccccCCcccceeeccccccCCCChhhhhcCCCC
Q 013004 98 ELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTI----P----DTLANLKQLKYLRLNNNSLSGLIPTSLTTITSL 169 (451)
Q Consensus 98 ~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~----p----~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L 169 (451)
+.|++++|++++..|..+..+++|+.|++++|++++.. | ..++.+++|+.|+|++|+++...+..+..+++|
T Consensus 483 ~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L 562 (680)
T 1ziw_A 483 TILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFEL 562 (680)
T ss_dssp CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTC
T ss_pred CEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCc
Confidence 77777777777655556667777777777777666421 1 125566666666666666664333456666666
Q ss_pred CeeccCCccccCcCCCC-CCCCcccccccccc
Q 013004 170 NILDLSNNRLSGPVPDN-GSFSQFTPISFENN 200 (451)
Q Consensus 170 ~~l~ls~N~l~~~~p~~-~~~~~~~~~~~~~n 200 (451)
+.||+++|++++.++.. ..+.++..+.+.+|
T Consensus 563 ~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N 594 (680)
T 1ziw_A 563 KIIDLGLNNLNTLPASVFNNQVSLKSLNLQKN 594 (680)
T ss_dssp CEEECCSSCCCCCCTTTTTTCTTCCEEECTTS
T ss_pred ceeECCCCCCCcCCHhHhCCCCCCCEEECCCC
Confidence 66666666666544432 23344444444443
No 336
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.45 E-value=1.3e-13 Score=144.74 Aligned_cols=162 Identities=20% Similarity=0.151 Sum_probs=119.7
Q ss_pred EeehhHHHhhhhcc-hhhhhhhhhhhhhccCCCcceE------------EEeecCCccccccCCccccCCCCCCEEeCcC
Q 013004 38 LVTLKAVLQECEQL-HLLISFLIFIRVLQSSSNLFVY------------LISDLGNAALSGELAPELGQLKNLELLELYG 104 (451)
Q Consensus 38 ~~~l~~~~~~~~~l-~~~~~~~~~~~~l~~~~n~~~~------------~~~~l~~n~~~g~~p~~l~~l~~L~~L~ls~ 104 (451)
+..|..+.+.+..+ |..++.+..|+.|++++|.+.. ..++|++|.+++..|..++.+++|++|++++
T Consensus 35 l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~ 114 (606)
T 3t6q_A 35 TECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQ 114 (606)
T ss_dssp CCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEECTT
T ss_pred CcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeeccc
Confidence 34555555666666 4457778888888888887654 2467778888877788888888888888888
Q ss_pred CccCccCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeeccccccCCCChhhhhcCCCCC--eeccCCccccCc
Q 013004 105 NNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLN--ILDLSNNRLSGP 182 (451)
Q Consensus 105 N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~--~l~ls~N~l~~~ 182 (451)
|.+++..|..++.+++|+.|++++|++++..++.+..+++|+.|++++|.+++..|..++.+++|+ .|++++|.+++.
T Consensus 115 n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l~~~ 194 (606)
T 3t6q_A 115 TGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAGI 194 (606)
T ss_dssp SCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCCCEE
T ss_pred cCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCccCcc
Confidence 888876677788888888888888888863333445588888888888888887788888888888 788888888887
Q ss_pred CCCCCCCCccccccccc
Q 013004 183 VPDNGSFSQFTPISFEN 199 (451)
Q Consensus 183 ~p~~~~~~~~~~~~~~~ 199 (451)
+|.......+....+.+
T Consensus 195 ~~~~~~~~~L~~L~l~~ 211 (606)
T 3t6q_A 195 EPGAFDSAVFQSLNFGG 211 (606)
T ss_dssp CTTTTTTCEEEEEECTT
T ss_pred ChhHhhhccccccccCC
Confidence 77654444444444433
No 337
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.45 E-value=9.4e-14 Score=134.74 Aligned_cols=164 Identities=22% Similarity=0.238 Sum_probs=127.2
Q ss_pred EEeehhHHHhhhhcchhh-hhhhhhhhhhccCCCcce--------------EEEeecCCccccccCCccccCCCCCCEEe
Q 013004 37 LLVTLKAVLQECEQLHLL-ISFLIFIRVLQSSSNLFV--------------YLISDLGNAALSGELAPELGQLKNLELLE 101 (451)
Q Consensus 37 ~~~~l~~~~~~~~~l~~~-~~~~~~~~~l~~~~n~~~--------------~~~~~l~~n~~~g~~p~~l~~l~~L~~L~ 101 (451)
.|..|....+.+..++.. +..+..|+.|+++.|.+. +..+++++|.++. +|..+. ++|+.|+
T Consensus 122 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~-l~~~~~--~~L~~L~ 198 (330)
T 1xku_A 122 TLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT-IPQGLP--PSLTELH 198 (330)
T ss_dssp TCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS-CCSSCC--TTCSEEE
T ss_pred cccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcccc-CCcccc--ccCCEEE
Confidence 344444444445555443 567788888888888663 2456788888874 777664 8999999
Q ss_pred CcCCccCccCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeeccccccCCCChhhhhcCCCCCeeccCCccccC
Q 013004 102 LYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSNNRLSG 181 (451)
Q Consensus 102 ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~ 181 (451)
+++|.+++..|..+..+++|+.|++++|.+++..|..++.+++|+.|++++|+++ .+|..+..+++|+.|++++|++++
T Consensus 199 l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~ 277 (330)
T 1xku_A 199 LDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISA 277 (330)
T ss_dssp CTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCC
T ss_pred CCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCc
Confidence 9999999888999999999999999999999887888999999999999999998 678889999999999999999997
Q ss_pred cCCCCC-------CCCcccccccccccccC
Q 013004 182 PVPDNG-------SFSQFTPISFENNLNLC 204 (451)
Q Consensus 182 ~~p~~~-------~~~~~~~~~~~~n~~lC 204 (451)
..+... ....+....+.+|+..+
T Consensus 278 ~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~ 307 (330)
T 1xku_A 278 IGSNDFCPPGYNTKKASYSGVSLFSNPVQY 307 (330)
T ss_dssp CCTTSSSCSSCCTTSCCCSEEECCSSSSCG
T ss_pred cChhhcCCcccccccccccceEeecCcccc
Confidence 655422 12344555666776443
No 338
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.44 E-value=7.9e-14 Score=146.06 Aligned_cols=157 Identities=24% Similarity=0.273 Sum_probs=103.4
Q ss_pred eEEEeehhHHHhhhhcchhhhhhhhhhhhhccCCCcceE----------EEeecCCccccccCCccccCCCCCCEEeCcC
Q 013004 35 FTLLVTLKAVLQECEQLHLLISFLIFIRVLQSSSNLFVY----------LISDLGNAALSGELAPELGQLKNLELLELYG 104 (451)
Q Consensus 35 ~~~~~~l~~~~~~~~~l~~~~~~~~~~~~l~~~~n~~~~----------~~~~l~~n~~~g~~p~~l~~l~~L~~L~ls~ 104 (451)
+..|..|....+.+..++ .+..+..|+.|+++.|.+.. ..++|++|.+++ ++.++.+++|+.|+|++
T Consensus 42 L~~L~~L~l~~n~i~~l~-~l~~l~~L~~L~Ls~N~l~~~~~l~~l~~L~~L~Ls~N~l~~--l~~l~~l~~L~~L~Ls~ 118 (605)
T 1m9s_A 42 LNSIDQIIANNSDIKSVQ-GIQYLPNVTKLFLNGNKLTDIKPLTNLKNLGWLFLDENKIKD--LSSLKDLKKLKSLSLEH 118 (605)
T ss_dssp HTTCCCCBCTTCCCCCCT-TGGGCTTCCEEECTTSCCCCCGGGGGCTTCCEEECCSSCCCC--CTTSTTCTTCCEEECTT
T ss_pred CCCCCEEECcCCCCCCCh-HHccCCCCCEEEeeCCCCCCChhhccCCCCCEEECcCCCCCC--ChhhccCCCCCEEEecC
Confidence 344444444444455554 35566677777777765542 345666777765 34677777788888888
Q ss_pred CccCccCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeeccccccCCCChhhhhcCCCCCeeccCCccccCcCC
Q 013004 105 NNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVP 184 (451)
Q Consensus 105 N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p 184 (451)
|++++ + +.+..+++|+.|+|++|++++. ..++.+++|+.|+|++|++++..| +..+++|+.|+|++|++++. |
T Consensus 119 N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l-~ 191 (605)
T 1m9s_A 119 NGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL-R 191 (605)
T ss_dssp SCCCC-C-GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC-G
T ss_pred CCCCC-C-ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCCC-h
Confidence 87774 3 3577777788888888877743 457777778888888888776555 77777788888888877764 4
Q ss_pred CCCCCCccccccccccc
Q 013004 185 DNGSFSQFTPISFENNL 201 (451)
Q Consensus 185 ~~~~~~~~~~~~~~~n~ 201 (451)
....+..+..+.+.+|.
T Consensus 192 ~l~~l~~L~~L~L~~N~ 208 (605)
T 1m9s_A 192 ALAGLKNLDVLELFSQE 208 (605)
T ss_dssp GGTTCTTCSEEECCSEE
T ss_pred HHccCCCCCEEEccCCc
Confidence 44555666666666554
No 339
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.44 E-value=5.2e-14 Score=145.15 Aligned_cols=129 Identities=22% Similarity=0.227 Sum_probs=67.8
Q ss_pred hhhhhhhhhhhccCCCcce---------------EEEeecCCccccccCCccc-----cCCCCCCEEeCcCCccCccCCc
Q 013004 54 LISFLIFIRVLQSSSNLFV---------------YLISDLGNAALSGELAPEL-----GQLKNLELLELYGNNLSGHIPS 113 (451)
Q Consensus 54 ~~~~~~~~~~l~~~~n~~~---------------~~~~~l~~n~~~g~~p~~l-----~~l~~L~~L~ls~N~l~~~~p~ 113 (451)
.++.++.++.|+++.|.+. +..+++++|.++|.+|..+ +.+++|+.+++++|.+ .+|.
T Consensus 215 ~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~ 292 (520)
T 2z7x_B 215 KLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQ 292 (520)
T ss_dssp GGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCT
T ss_pred hhccccchhhccccccccCHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccce--ecch
Confidence 4455566666666555332 3455667777777777666 4444444444444443 2220
Q ss_pred -c-------------------------ccCCCCCcEEeCCCCcCCccCcccccCCcccceeeccccccCC--CChhhhhc
Q 013004 114 -A-------------------------LGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSG--LIPTSLTT 165 (451)
Q Consensus 114 -~-------------------------~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~--~~p~~~~~ 165 (451)
. +..+++|+.|++++|++++.+|..++.+++|+.|++++|++++ .+|..++.
T Consensus 293 ~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~ 372 (520)
T 2z7x_B 293 SYIYEIFSNMNIKNFTVSGTRMVHMLCPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQ 372 (520)
T ss_dssp HHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTT
T ss_pred hhhhcccccCceeEEEcCCCccccccchhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhh
Confidence 0 1344555555555555555555555555555555555555554 33444555
Q ss_pred CCCCCeeccCCccccCcCC
Q 013004 166 ITSLNILDLSNNRLSGPVP 184 (451)
Q Consensus 166 l~~L~~l~ls~N~l~~~~p 184 (451)
+++|+.|++++|.+++.+|
T Consensus 373 l~~L~~L~Ls~N~l~~~l~ 391 (520)
T 2z7x_B 373 MKSLQQLDISQNSVSYDEK 391 (520)
T ss_dssp CTTCCEEECCSSCCBCCGG
T ss_pred CCCCCEEECCCCcCCcccc
Confidence 5555555555555555333
No 340
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.44 E-value=1.9e-13 Score=140.98 Aligned_cols=164 Identities=22% Similarity=0.279 Sum_probs=111.4
Q ss_pred cceEEEeehhHHHhhhhcch-hhhhhh---hhhhhhccCCCcce----------EEEeecCCccccccCCccccCCCCCC
Q 013004 33 RGFTLLVTLKAVLQECEQLH-LLISFL---IFIRVLQSSSNLFV----------YLISDLGNAALSGELAPELGQLKNLE 98 (451)
Q Consensus 33 ~~~~~~~~l~~~~~~~~~l~-~~~~~~---~~~~~l~~~~n~~~----------~~~~~l~~n~~~g~~p~~l~~l~~L~ 98 (451)
.+++.+..+....+.+ .+| ..+..+ ..++.|++++|.+. +..+++++|.+++.+|..++.+++|+
T Consensus 273 ~~l~~L~~l~l~~n~~-~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 351 (520)
T 2z7x_B 273 TSLKALSIHQVVSDVF-GFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKISPFLHLDFSNNLLTDTVFENCGHLTELE 351 (520)
T ss_dssp CCCCEEEEEEEEECCC-CSCTHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCC
T ss_pred ccCceeEeccccccce-ecchhhhhcccccCceeEEEcCCCccccccchhhCCcccEEEeECCccChhhhhhhccCCCCC
Confidence 4455555554433333 344 222222 34666666665443 34568888888888888888888888
Q ss_pred EEeCcCCccCc--cCCccccCCCCCcEEeCCCCcCCccCccc-ccCCcccceeeccccccCCCChhhhhcCCCCCeeccC
Q 013004 99 LLELYGNNLSG--HIPSALGNLIKLKSLDLYSNLFNGTIPDT-LANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLS 175 (451)
Q Consensus 99 ~L~ls~N~l~~--~~p~~~~~l~~L~~L~ls~N~l~g~~p~~-~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls 175 (451)
.|++++|++++ .+|..++.+++|+.|++++|.+++.+|.. +..+++|+.|++++|++++.+|..+. ++|+.|+++
T Consensus 352 ~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls 429 (520)
T 2z7x_B 352 TLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLH 429 (520)
T ss_dssp EEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECC
T ss_pred EEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECC
Confidence 88888888886 56677888888888888888888756654 67777888888888888776665543 577778888
Q ss_pred CccccCcCCC-CCCCCcccccccccc
Q 013004 176 NNRLSGPVPD-NGSFSQFTPISFENN 200 (451)
Q Consensus 176 ~N~l~~~~p~-~~~~~~~~~~~~~~n 200 (451)
+|+++ .+|. ...+..+..+.+.+|
T Consensus 430 ~N~l~-~ip~~~~~l~~L~~L~L~~N 454 (520)
T 2z7x_B 430 SNKIK-SIPKQVVKLEALQELNVASN 454 (520)
T ss_dssp SSCCC-CCCGGGGGCTTCCEEECCSS
T ss_pred CCccc-ccchhhhcCCCCCEEECCCC
Confidence 88777 3443 344556666666665
No 341
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.44 E-value=1.4e-13 Score=136.69 Aligned_cols=164 Identities=19% Similarity=0.126 Sum_probs=96.5
Q ss_pred EEeehhHHHhhhhcchhh-hhhhhhhhhhccCCCcceEE------------EeecCCccccccCCccccCCCCCCEEeCc
Q 013004 37 LLVTLKAVLQECEQLHLL-ISFLIFIRVLQSSSNLFVYL------------ISDLGNAALSGELAPELGQLKNLELLELY 103 (451)
Q Consensus 37 ~~~~l~~~~~~~~~l~~~-~~~~~~~~~l~~~~n~~~~~------------~~~l~~n~~~g~~p~~l~~l~~L~~L~ls 103 (451)
.++.+...-+.+..+|.. +..++.++.|++++|.+... .++|++|.+++..|..++.+++|+.|+++
T Consensus 46 ~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 125 (390)
T 3o6n_A 46 NQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLE 125 (390)
T ss_dssp CCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECC
Confidence 333333333344555544 34556666666666654432 34566666665555556666666667766
Q ss_pred CCccCccCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeeccccccCCCCh-----------------------
Q 013004 104 GNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIP----------------------- 160 (451)
Q Consensus 104 ~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p----------------------- 160 (451)
+|.++...+..++.+++|+.|++++|.+++..|..++.+++|+.|++++|++++...
T Consensus 126 ~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 205 (390)
T 3o6n_A 126 RNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTLAIPI 205 (390)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCCGGGCTTCSEEECCSSCCSEEECCS
T ss_pred CCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCccccccccccceeecccccccccCCCC
Confidence 666663323334666666666666666665555556666666666666666553211
Q ss_pred ------------------------------------hhhhcCCCCCeeccCCccccCcCCC-CCCCCcccccccccc
Q 013004 161 ------------------------------------TSLTTITSLNILDLSNNRLSGPVPD-NGSFSQFTPISFENN 200 (451)
Q Consensus 161 ------------------------------------~~~~~l~~L~~l~ls~N~l~~~~p~-~~~~~~~~~~~~~~n 200 (451)
..+..+++|+.|++++|.+++.+|. ...+..+..+.+.+|
T Consensus 206 ~L~~L~l~~n~l~~~~~~~~~~L~~L~l~~n~l~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n 282 (390)
T 3o6n_A 206 AVEELDASHNSINVVRGPVNVELTILKLQHNNLTDTAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNN 282 (390)
T ss_dssp SCSEEECCSSCCCEEECCCCSSCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSS
T ss_pred cceEEECCCCeeeeccccccccccEEECCCCCCcccHHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCC
Confidence 2355667888888888888876554 234556666666665
No 342
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.43 E-value=1.3e-13 Score=150.60 Aligned_cols=148 Identities=22% Similarity=0.226 Sum_probs=89.2
Q ss_pred EeehhHHHhhhhcc-hhhhhhhhhhhhhccCCCcce-------------EEEeecCCccccccCCccccCCCCCCEEeCc
Q 013004 38 LVTLKAVLQECEQL-HLLISFLIFIRVLQSSSNLFV-------------YLISDLGNAALSGELAPELGQLKNLELLELY 103 (451)
Q Consensus 38 ~~~l~~~~~~~~~l-~~~~~~~~~~~~l~~~~n~~~-------------~~~~~l~~n~~~g~~p~~l~~l~~L~~L~ls 103 (451)
++.|+.+.+.+..+ +..++.+..|+.|++++|... +..++|++|.+.+..|..++++++|+.|+|+
T Consensus 26 l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 105 (844)
T 3j0a_A 26 TERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLY 105 (844)
T ss_dssp CCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECT
T ss_pred cCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEeeCc
Confidence 33444444445544 334566666777777666221 2345666666666666666666666666666
Q ss_pred CCccCccCCcc--ccCCCCCcEEeCCCCcCCccCc-ccccCCcccceeeccccccCCCChhhhhcC--CCCCeeccCCcc
Q 013004 104 GNNLSGHIPSA--LGNLIKLKSLDLYSNLFNGTIP-DTLANLKQLKYLRLNNNSLSGLIPTSLTTI--TSLNILDLSNNR 178 (451)
Q Consensus 104 ~N~l~~~~p~~--~~~l~~L~~L~ls~N~l~g~~p-~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l--~~L~~l~ls~N~ 178 (451)
+|.+++.+|.. ++++++|+.|+|++|.+++..| ..|+++++|++|+|++|.+++..|..+..+ ++|+.|++++|.
T Consensus 106 ~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~~n~ 185 (844)
T 3j0a_A 106 FCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANS 185 (844)
T ss_dssp TCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEECCSB
T ss_pred CCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECCCCc
Confidence 66666655554 6666666666666666665433 356666666666666666666666666555 566666666666
Q ss_pred ccCcCCC
Q 013004 179 LSGPVPD 185 (451)
Q Consensus 179 l~~~~p~ 185 (451)
+++..|.
T Consensus 186 l~~~~~~ 192 (844)
T 3j0a_A 186 LYSRVSV 192 (844)
T ss_dssp SCCCCCC
T ss_pred ccccccc
Confidence 6665543
No 343
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.43 E-value=1.9e-14 Score=149.86 Aligned_cols=151 Identities=19% Similarity=0.272 Sum_probs=118.0
Q ss_pred ehhHHHhhhhcchhhhhhhhhhhhhccCCCcceE-------------------------EEee-cC-------------C
Q 013004 40 TLKAVLQECEQLHLLISFLIFIRVLQSSSNLFVY-------------------------LISD-LG-------------N 80 (451)
Q Consensus 40 ~l~~~~~~~~~l~~~~~~~~~~~~l~~~~n~~~~-------------------------~~~~-l~-------------~ 80 (451)
.|..+.+.++.||..|+.+..|+.|++++|.... ..++ ++ +
T Consensus 353 ~L~Ls~n~L~~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~~L~~l~l~~ 432 (567)
T 1dce_A 353 RCELSVEKSTVLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLDDLRSKFLLE 432 (567)
T ss_dssp SCCCCHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHH
T ss_pred eccCChhhHHhhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccchhhhhhhhc
Confidence 5556667788889889989899998887664100 0011 11 1
Q ss_pred ccccccCCccccCCCCCCEEeCcCCccCccCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeeccccccCCCCh
Q 013004 81 AALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIP 160 (451)
Q Consensus 81 n~~~g~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p 160 (451)
|.++. +|+ ..|+.|+|++|.+++ +|. ++.+++|+.|+|++|+++ .+|..++++++|+.|+|++|++++ +|
T Consensus 433 n~i~~-l~~-----~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp 502 (567)
T 1dce_A 433 NSVLK-MEY-----ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD 502 (567)
T ss_dssp HHHHH-HHH-----TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG
T ss_pred ccccc-cCc-----cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc
Confidence 12211 111 258899999999995 786 999999999999999999 899999999999999999999997 68
Q ss_pred hhhhcCCCCCeeccCCccccCcC-C-CCCCCCccccccccccc
Q 013004 161 TSLTTITSLNILDLSNNRLSGPV-P-DNGSFSQFTPISFENNL 201 (451)
Q Consensus 161 ~~~~~l~~L~~l~ls~N~l~~~~-p-~~~~~~~~~~~~~~~n~ 201 (451)
.++.+++|+.|++++|++++.+ | ..+.+.++..+.+.+|.
T Consensus 503 -~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~ 544 (567)
T 1dce_A 503 -GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNS 544 (567)
T ss_dssp -GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSG
T ss_pred -ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCc
Confidence 8999999999999999999985 5 44567777888787774
No 344
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.43 E-value=3.7e-14 Score=145.19 Aligned_cols=155 Identities=19% Similarity=0.137 Sum_probs=113.9
Q ss_pred EeehhHHHhhhhcch-hhhhhhhhhhhhccCCCcceEE----------EeecCCccccccCCccccCCCCCCEEeCcCCc
Q 013004 38 LVTLKAVLQECEQLH-LLISFLIFIRVLQSSSNLFVYL----------ISDLGNAALSGELAPELGQLKNLELLELYGNN 106 (451)
Q Consensus 38 ~~~l~~~~~~~~~l~-~~~~~~~~~~~l~~~~n~~~~~----------~~~l~~n~~~g~~p~~l~~l~~L~~L~ls~N~ 106 (451)
+..|....+.+..++ ..++.++.|+.|++++|.+... .++|++|.+++ +| ..++|+.|++++|.
T Consensus 36 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~l~~l~~L~~L~Ls~N~l~~-l~----~~~~L~~L~L~~N~ 110 (487)
T 3oja_A 36 VKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLDLESLSTLRTLDLNNNYVQE-LL----VGPSIETLHAANNN 110 (487)
T ss_dssp CCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEECTTCTTCCEEECCSSEEEE-EE----ECTTCCEEECCSSC
T ss_pred ccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcccccCCCCCEEEecCCcCCC-CC----CCCCcCEEECcCCc
Confidence 344444444445553 3566677777777777776532 34566666654 22 22677777777777
Q ss_pred cCccCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeeccccccCCCChhhhh-cCCCCCeeccCCccccCcCCC
Q 013004 107 LSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLT-TITSLNILDLSNNRLSGPVPD 185 (451)
Q Consensus 107 l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~-~l~~L~~l~ls~N~l~~~~p~ 185 (451)
+++..+. .+++|+.|+|++|.+++..|..++.+++|+.|+|++|.+++.+|..+. .+++|+.|++++|.+++..+.
T Consensus 111 l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~~~ 187 (487)
T 3oja_A 111 ISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKGQ 187 (487)
T ss_dssp CCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEECC
T ss_pred CCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCcccccccc
Confidence 7755443 467899999999999988898999999999999999999998888876 789999999999999987443
Q ss_pred CCCCCccccccccccc
Q 013004 186 NGSFSQFTPISFENNL 201 (451)
Q Consensus 186 ~~~~~~~~~~~~~~n~ 201 (451)
..+..+..+.+.+|.
T Consensus 188 -~~l~~L~~L~Ls~N~ 202 (487)
T 3oja_A 188 -VVFAKLKTLDLSSNK 202 (487)
T ss_dssp -CCCTTCCEEECCSSC
T ss_pred -ccCCCCCEEECCCCC
Confidence 346777777777763
No 345
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.43 E-value=4.7e-13 Score=135.68 Aligned_cols=139 Identities=19% Similarity=0.226 Sum_probs=70.9
Q ss_pred hhhhhccCCCcceEE------------EeecCCccccccCCccccCCCCCCEEeCcCCccCccCCccccCCCCCcEEeCC
Q 013004 60 FIRVLQSSSNLFVYL------------ISDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLY 127 (451)
Q Consensus 60 ~~~~l~~~~n~~~~~------------~~~l~~n~~~g~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls 127 (451)
.++.|++++|.+... .++|++|.+++..|..+..+++|+.|+|++|++++..+..+..+++|+.|+|+
T Consensus 76 ~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 155 (452)
T 3zyi_A 76 NTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLR 155 (452)
T ss_dssp TCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEECC
T ss_pred CccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEECC
Confidence 455555555554432 34555555555555556666666666666666664444445666666666666
Q ss_pred CCcCCccCcccccCCcccceeeccc-cccCCCChhhhhcCCCCCeeccCCccccCcCCCCCCCCccccccccc
Q 013004 128 SNLFNGTIPDTLANLKQLKYLRLNN-NSLSGLIPTSLTTITSLNILDLSNNRLSGPVPDNGSFSQFTPISFEN 199 (451)
Q Consensus 128 ~N~l~g~~p~~~~~l~~L~~L~ls~-N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~ 199 (451)
+|++++..+..|.++++|+.|++++ |.+....+..+..+++|+.|++++|++++. |....+.++..+.+.+
T Consensus 156 ~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~~~~~l~~L~~L~Ls~ 227 (452)
T 3zyi_A 156 NNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-PNLTPLVGLEELEMSG 227 (452)
T ss_dssp SCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-CCCTTCTTCCEEECTT
T ss_pred CCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-ccccccccccEEECcC
Confidence 6666543344455555555555555 223222223445555555555555555532 3333333343333333
No 346
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.42 E-value=1.3e-13 Score=132.51 Aligned_cols=155 Identities=26% Similarity=0.342 Sum_probs=70.9
Q ss_pred EEEeehhHHHhhhhcchhhhhhhhhhhhhccCCCcceE----------EEeecCCccccccCCccccCCCCCCEEeCcCC
Q 013004 36 TLLVTLKAVLQECEQLHLLISFLIFIRVLQSSSNLFVY----------LISDLGNAALSGELAPELGQLKNLELLELYGN 105 (451)
Q Consensus 36 ~~~~~l~~~~~~~~~l~~~~~~~~~~~~l~~~~n~~~~----------~~~~l~~n~~~g~~p~~l~~l~~L~~L~ls~N 105 (451)
..|..|....+.+..++. +..+..|+.|++++|.+.. ..++|++|.+++ +| .++.+++|+.|++++|
T Consensus 63 ~~L~~L~L~~n~i~~~~~-~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~l~~n 139 (308)
T 1h6u_A 63 NNLIGLELKDNQITDLAP-LKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITD-VT-PLAGLSNLQVLYLDLN 139 (308)
T ss_dssp TTCCEEECCSSCCCCCGG-GTTCCSCCEEECCSCCCSCCGGGTTCTTCCEEECTTSCCCC-CG-GGTTCTTCCEEECCSS
T ss_pred CCCCEEEccCCcCCCChh-HccCCCCCEEEccCCcCCCchhhcCCCCCCEEECCCCCCCC-ch-hhcCCCCCCEEECCCC
Confidence 333334333344444444 4444555555555544321 234444555443 22 2455555555555555
Q ss_pred ccCccCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeeccccccCCCChhhhhcCCCCCeeccCCccccCcCCC
Q 013004 106 NLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPD 185 (451)
Q Consensus 106 ~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~ 185 (451)
.+++..+ ++.+++|+.|++++|.+++ +|. +..+++|+.|++++|++++..| +..+++|+.|++++|++++..|
T Consensus 140 ~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~- 212 (308)
T 1h6u_A 140 QITNISP--LAGLTNLQYLSIGNAQVSD-LTP-LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP- 212 (308)
T ss_dssp CCCCCGG--GGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGG-
T ss_pred ccCcCcc--ccCCCCccEEEccCCcCCC-Chh-hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCcccc-
Confidence 5543222 4455555555555555542 222 4555555555555555543222 4455555555555555554332
Q ss_pred CCCCCcccccccccc
Q 013004 186 NGSFSQFTPISFENN 200 (451)
Q Consensus 186 ~~~~~~~~~~~~~~n 200 (451)
...+..+..+.+.+|
T Consensus 213 l~~l~~L~~L~l~~N 227 (308)
T 1h6u_A 213 LANTSNLFIVTLTNQ 227 (308)
T ss_dssp GTTCTTCCEEEEEEE
T ss_pred ccCCCCCCEEEccCC
Confidence 223334444444444
No 347
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.41 E-value=8.6e-14 Score=128.63 Aligned_cols=119 Identities=18% Similarity=0.220 Sum_probs=56.1
Q ss_pred hhhhhccCCCcceEE------------EeecCCcc-ccccCCccccCCCCCCEEeCcC-CccCccCCccccCCCCCcEEe
Q 013004 60 FIRVLQSSSNLFVYL------------ISDLGNAA-LSGELAPELGQLKNLELLELYG-NNLSGHIPSALGNLIKLKSLD 125 (451)
Q Consensus 60 ~~~~l~~~~n~~~~~------------~~~l~~n~-~~g~~p~~l~~l~~L~~L~ls~-N~l~~~~p~~~~~l~~L~~L~ 125 (451)
.++.|++++|.++.. .+++++|. +++..+..+..+++|++|++++ |++++..|..|..+++|+.|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 455666666554432 23444443 3332222444455555555554 555433334444555555555
Q ss_pred CCCCcCCccCcccccCCcccc---eeecccc-ccCCCChhhhhcCCCCC-eeccCCcccc
Q 013004 126 LYSNLFNGTIPDTLANLKQLK---YLRLNNN-SLSGLIPTSLTTITSLN-ILDLSNNRLS 180 (451)
Q Consensus 126 ls~N~l~g~~p~~~~~l~~L~---~L~ls~N-~l~~~~p~~~~~l~~L~-~l~ls~N~l~ 180 (451)
+++|.+++ +|+ ++.+++|+ .|++++| .+++..+..+..+++|+ .|++++|.++
T Consensus 112 l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~ 169 (239)
T 2xwt_C 112 IFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT 169 (239)
T ss_dssp EEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC
T ss_pred CCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc
Confidence 55555542 443 44444444 5555555 44443334444555555 5555555554
No 348
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.41 E-value=8.9e-14 Score=133.81 Aligned_cols=142 Identities=16% Similarity=0.072 Sum_probs=93.2
Q ss_pred hhhhhhccCCCcceE--------------EEeecCCccccccCC----ccccCCCCCCEEeCcCCccCccCCccccCCCC
Q 013004 59 IFIRVLQSSSNLFVY--------------LISDLGNAALSGELA----PELGQLKNLELLELYGNNLSGHIPSALGNLIK 120 (451)
Q Consensus 59 ~~~~~l~~~~n~~~~--------------~~~~l~~n~~~g~~p----~~l~~l~~L~~L~ls~N~l~~~~p~~~~~l~~ 120 (451)
..++.|++++|.+.. ..++|++|.+++..| ..+..+++|+.|+|++|++++..|..++.+++
T Consensus 91 ~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~ 170 (310)
T 4glp_A 91 SRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPA 170 (310)
T ss_dssp SCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTT
T ss_pred CceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCC
Confidence 346666666665442 234666777776554 34456778888888888887777777888888
Q ss_pred CcEEeCCCCcCCcc--Cc--ccccCCcccceeeccccccCCCChh----hhhcCCCCCeeccCCccccCcCCC-CCCC--
Q 013004 121 LKSLDLYSNLFNGT--IP--DTLANLKQLKYLRLNNNSLSGLIPT----SLTTITSLNILDLSNNRLSGPVPD-NGSF-- 189 (451)
Q Consensus 121 L~~L~ls~N~l~g~--~p--~~~~~l~~L~~L~ls~N~l~~~~p~----~~~~l~~L~~l~ls~N~l~~~~p~-~~~~-- 189 (451)
|+.|+|++|++.+. +| ..++.+++|++|+|++|+++. +|. .++.+++|+.||+++|.+++..|. ...+
T Consensus 171 L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ 249 (310)
T 4glp_A 171 LTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMW 249 (310)
T ss_dssp CCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCC
T ss_pred CCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccC
Confidence 88888888877642 22 224677788888888888863 343 246677888888888888777543 2333
Q ss_pred -Cccccccccccc
Q 013004 190 -SQFTPISFENNL 201 (451)
Q Consensus 190 -~~~~~~~~~~n~ 201 (451)
.++..+.+.+|.
T Consensus 250 ~~~L~~L~Ls~N~ 262 (310)
T 4glp_A 250 SSALNSLNLSFAG 262 (310)
T ss_dssp CTTCCCEECCSSC
T ss_pred cCcCCEEECCCCC
Confidence 355555555553
No 349
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.41 E-value=2.4e-13 Score=132.62 Aligned_cols=157 Identities=31% Similarity=0.387 Sum_probs=102.8
Q ss_pred EEEeehhHHHhhhhcchhhhhhhhhhhhhccCCCcce----------EEEeecCCccccccCCccccCCCCCCEEeCcCC
Q 013004 36 TLLVTLKAVLQECEQLHLLISFLIFIRVLQSSSNLFV----------YLISDLGNAALSGELAPELGQLKNLELLELYGN 105 (451)
Q Consensus 36 ~~~~~l~~~~~~~~~l~~~~~~~~~~~~l~~~~n~~~----------~~~~~l~~n~~~g~~p~~l~~l~~L~~L~ls~N 105 (451)
..+..|....+.+..++. +..+..++.++++.|.+. +..+++++|.+++ +|+ +..+++|+.|++++|
T Consensus 177 ~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~L~~L~l~~n~l~~-~~~-~~~l~~L~~L~l~~n 253 (347)
T 4fmz_A 177 TDLYSLSLNYNQIEDISP-LASLTSLHYFTAYVNQITDITPVANMTRLNSLKIGNNKITD-LSP-LANLSQLTWLEIGTN 253 (347)
T ss_dssp TTCSEEECTTSCCCCCGG-GGGCTTCCEEECCSSCCCCCGGGGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSS
T ss_pred CCCCEEEccCCccccccc-ccCCCccceeecccCCCCCCchhhcCCcCCEEEccCCccCC-Ccc-hhcCCCCCEEECCCC
Confidence 333444434344444444 445555666666655443 2345666777664 333 777777788888877
Q ss_pred ccCccCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeeccccccCCCChhhhhcCCCCCeeccCCccccCcCCC
Q 013004 106 NLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPD 185 (451)
Q Consensus 106 ~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~ 185 (451)
.+++ + +.+..+++|+.|++++|.+++ +| .+..+++|+.|++++|++++..|..+..+++|+.|++++|++++.+|
T Consensus 254 ~l~~-~-~~~~~l~~L~~L~l~~n~l~~-~~-~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~- 328 (347)
T 4fmz_A 254 QISD-I-NAVKDLTKLKMLNVGSNQISD-IS-VLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP- 328 (347)
T ss_dssp CCCC-C-GGGTTCTTCCEEECCSSCCCC-CG-GGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG-
T ss_pred ccCC-C-hhHhcCCCcCEEEccCCccCC-Ch-hhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC-
Confidence 7774 3 457777788888888887774 33 47777888888888888877777778888888888888888877666
Q ss_pred CCCCCcccccccccc
Q 013004 186 NGSFSQFTPISFENN 200 (451)
Q Consensus 186 ~~~~~~~~~~~~~~n 200 (451)
...+..+....+.+|
T Consensus 329 ~~~l~~L~~L~l~~N 343 (347)
T 4fmz_A 329 LASLSKMDSADFANQ 343 (347)
T ss_dssp GGGCTTCSEESSSCC
T ss_pred hhhhhccceeehhhh
Confidence 444566666666555
No 350
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.41 E-value=4.2e-13 Score=139.80 Aligned_cols=140 Identities=24% Similarity=0.316 Sum_probs=105.5
Q ss_pred hhhhhccCCCcc----------eEEEeecCCccccccCCccccCCCCCCEEeCcCCccCc--cCCccccCCCCCcEEeCC
Q 013004 60 FIRVLQSSSNLF----------VYLISDLGNAALSGELAPELGQLKNLELLELYGNNLSG--HIPSALGNLIKLKSLDLY 127 (451)
Q Consensus 60 ~~~~l~~~~n~~----------~~~~~~l~~n~~~g~~p~~l~~l~~L~~L~ls~N~l~~--~~p~~~~~l~~L~~L~ls 127 (451)
.++.|++++|.+ .+..+++++|.+++.+|..++.+++|+.|++++|++++ .+|..+..+++|+.|+++
T Consensus 332 ~L~~L~l~~n~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~ 411 (562)
T 3a79_B 332 NIKMLSISDTPFIHMVCPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVS 411 (562)
T ss_dssp CCSEEEEESSCCCCCCCCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECT
T ss_pred cceEEEccCCCcccccCccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECC
Confidence 366666665543 34567888888988888889999999999999999986 345678888999999999
Q ss_pred CCcCCccCccc-ccCCcccceeeccccccCCCChhhhhcCCCCCeeccCCccccCcCCCCCCCCccccccccccc
Q 013004 128 SNLFNGTIPDT-LANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPDNGSFSQFTPISFENNL 201 (451)
Q Consensus 128 ~N~l~g~~p~~-~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~ 201 (451)
+|++++.+|.. +..+++|+.|++++|++++.+|..+. ++|+.|++++|+++..++....+..+..+.+.+|.
T Consensus 412 ~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~ 484 (562)
T 3a79_B 412 LNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIMSIPKDVTHLQALQELNVASNQ 484 (562)
T ss_dssp TSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCCCCCTTTTSSCCCSEEECCSSC
T ss_pred CCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCcccChhhcCCCCCCEEECCCCC
Confidence 99998756654 77788888888888888876665543 57888888888888544444556666766666664
No 351
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.41 E-value=2.4e-13 Score=121.84 Aligned_cols=122 Identities=16% Similarity=0.239 Sum_probs=101.5
Q ss_pred EeecCCccccccCCccccCCCCCCEEeCcCCccCccCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeeccccc
Q 013004 75 ISDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNS 154 (451)
Q Consensus 75 ~~~l~~n~~~g~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~ 154 (451)
.+++++|.++ .+| .+..+++|+.|++++|.++ .++.+..+++|+.|++++|.+++..|..++.+++|++|++++|+
T Consensus 48 ~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~ 123 (197)
T 4ezg_A 48 YITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSA 123 (197)
T ss_dssp EEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSB
T ss_pred EEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCc
Confidence 3455555555 466 6889999999999999775 34579999999999999999998889999999999999999999
Q ss_pred cCCCChhhhhcCCCCCeeccCCccccCcCCCCCCCCcccccccccc
Q 013004 155 LSGLIPTSLTTITSLNILDLSNNRLSGPVPDNGSFSQFTPISFENN 200 (451)
Q Consensus 155 l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n 200 (451)
+++..|..++.+++|+.|++++|.+.+.+|....+.++..+.+.+|
T Consensus 124 i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~~l~~l~~L~~L~l~~n 169 (197)
T 4ezg_A 124 HDDSILTKINTLPKVNSIDLSYNGAITDIMPLKTLPELKSLNIQFD 169 (197)
T ss_dssp CBGGGHHHHTTCSSCCEEECCSCTBCCCCGGGGGCSSCCEEECTTB
T ss_pred cCcHhHHHHhhCCCCCEEEccCCCCccccHhhcCCCCCCEEECCCC
Confidence 9988899999999999999999984444555555666777666665
No 352
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.41 E-value=3.9e-13 Score=131.27 Aligned_cols=103 Identities=25% Similarity=0.226 Sum_probs=91.7
Q ss_pred ecCCc-cccccCCccccCCCCCCEEeCcC-CccCccCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeeccccc
Q 013004 77 DLGNA-ALSGELAPELGQLKNLELLELYG-NNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNS 154 (451)
Q Consensus 77 ~l~~n-~~~g~~p~~l~~l~~L~~L~ls~-N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~ 154 (451)
+++++ .+++ +|. ++.+++|+.|+|++ |+|++..|..|+.|++|+.|+|++|+|++..|..|++|++|+.|+|++|+
T Consensus 14 ~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 91 (347)
T 2ifg_A 14 RCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNA 91 (347)
T ss_dssp ECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSC
T ss_pred EcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCCc
Confidence 56666 6664 898 99999999999996 99998877899999999999999999999889999999999999999999
Q ss_pred cCCCChhhhhcCCCCCeeccCCccccCc
Q 013004 155 LSGLIPTSLTTITSLNILDLSNNRLSGP 182 (451)
Q Consensus 155 l~~~~p~~~~~l~~L~~l~ls~N~l~~~ 182 (451)
|++..|..+..+. |+.|++++|++...
T Consensus 92 l~~~~~~~~~~~~-L~~l~l~~N~~~c~ 118 (347)
T 2ifg_A 92 LESLSWKTVQGLS-LQELVLSGNPLHCS 118 (347)
T ss_dssp CSCCCSTTTCSCC-CCEEECCSSCCCCC
T ss_pred cceeCHHHcccCC-ceEEEeeCCCccCC
Confidence 9987666666665 99999999999864
No 353
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.40 E-value=3.8e-14 Score=136.37 Aligned_cols=161 Identities=19% Similarity=0.144 Sum_probs=120.8
Q ss_pred EeehhHHHhhhh-cchhhh--hhhhhhhhhccCCCcceE----------------EEeecCCccccccCCccccCCCCCC
Q 013004 38 LVTLKAVLQECE-QLHLLI--SFLIFIRVLQSSSNLFVY----------------LISDLGNAALSGELAPELGQLKNLE 98 (451)
Q Consensus 38 ~~~l~~~~~~~~-~l~~~~--~~~~~~~~l~~~~n~~~~----------------~~~~l~~n~~~g~~p~~l~~l~~L~ 98 (451)
++.|....+.+. ..|..+ +.+..|+.|++++|.+.. ..++|++|.+++..|..++.+++|+
T Consensus 93 L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 172 (310)
T 4glp_A 93 LKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALT 172 (310)
T ss_dssp CCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCC
T ss_pred eeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCCC
Confidence 444444444433 333334 667788888888887542 4578889999887888899999999
Q ss_pred EEeCcCCccCcc--C--CccccCCCCCcEEeCCCCcCCccCcc----cccCCcccceeeccccccCCCChhhhhcC---C
Q 013004 99 LLELYGNNLSGH--I--PSALGNLIKLKSLDLYSNLFNGTIPD----TLANLKQLKYLRLNNNSLSGLIPTSLTTI---T 167 (451)
Q Consensus 99 ~L~ls~N~l~~~--~--p~~~~~l~~L~~L~ls~N~l~g~~p~----~~~~l~~L~~L~ls~N~l~~~~p~~~~~l---~ 167 (451)
+|+|++|++.+. + +..++.+++|+.|+|++|+++ .+|. .++.+++|++|+|++|++++..|..+..+ +
T Consensus 173 ~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~ 251 (310)
T 4glp_A 173 SLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSS 251 (310)
T ss_dssp EEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCT
T ss_pred EEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcC
Confidence 999999998752 2 233478899999999999997 4444 25778999999999999998878777776 5
Q ss_pred CCCeeccCCccccCcCCCCCCCCccccccccccc
Q 013004 168 SLNILDLSNNRLSGPVPDNGSFSQFTPISFENNL 201 (451)
Q Consensus 168 ~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~ 201 (451)
+|+.|++++|+++ .+|... +.++..+.+.+|.
T Consensus 252 ~L~~L~Ls~N~l~-~lp~~~-~~~L~~L~Ls~N~ 283 (310)
T 4glp_A 252 ALNSLNLSFAGLE-QVPKGL-PAKLRVLDLSSNR 283 (310)
T ss_dssp TCCCEECCSSCCC-SCCSCC-CSCCSCEECCSCC
T ss_pred cCCEEECCCCCCC-chhhhh-cCCCCEEECCCCc
Confidence 8999999999999 556543 3677777777764
No 354
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.40 E-value=2.1e-13 Score=133.51 Aligned_cols=117 Identities=22% Similarity=0.239 Sum_probs=55.3
Q ss_pred hhhcchhhhhhhhhhhhhccCCCcceEEEeecCCccccccCCccccCCCCCCEEeCcCCccCccCCccccCCCCCcEEeC
Q 013004 47 ECEQLHLLISFLIFIRVLQSSSNLFVYLISDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDL 126 (451)
Q Consensus 47 ~~~~l~~~~~~~~~~~~l~~~~n~~~~~~~~l~~n~~~g~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l 126 (451)
.+..+|..+. ..++.|++++|.+. +..+..+.++++|+.|++++|++++..|..+..+++|+.|++
T Consensus 42 ~l~~iP~~~~--~~L~~L~l~~n~i~------------~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (353)
T 2z80_A 42 SLNSIPSGLT--EAVKSLDLSNNRIT------------YISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDL 107 (353)
T ss_dssp TCSSCCTTCC--TTCCEEECTTSCCC------------EECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred Cccccccccc--ccCcEEECCCCcCc------------ccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEEC
Confidence 3445554322 34555555555443 222224445555555555555555444444555555555555
Q ss_pred CCCcCCccCcccccCCcccceeeccccccCCCCh-hhhhcCCCCCeeccCCc
Q 013004 127 YSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIP-TSLTTITSLNILDLSNN 177 (451)
Q Consensus 127 s~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p-~~~~~l~~L~~l~ls~N 177 (451)
++|++++..+..++++++|++|++++|++++..+ ..+..+++|+.|++++|
T Consensus 108 s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n 159 (353)
T 2z80_A 108 SYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNM 159 (353)
T ss_dssp CSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEES
T ss_pred CCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCC
Confidence 5555543222224555555555555555543222 24444555555555554
No 355
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.40 E-value=2.9e-13 Score=127.12 Aligned_cols=139 Identities=22% Similarity=0.272 Sum_probs=103.5
Q ss_pred hhhhhhhhhhccCCCcce----------EEEeecCCccccccCCccccCCCCCCEEeCcCCccCccCCccccCCCCCcEE
Q 013004 55 ISFLIFIRVLQSSSNLFV----------YLISDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSL 124 (451)
Q Consensus 55 ~~~~~~~~~l~~~~n~~~----------~~~~~l~~n~~~g~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L 124 (451)
+..+..++.|++++|.+. +..++|++|.+++ +|+ ++.+++|+.|++++|++++ +|... . ++|+.|
T Consensus 37 ~~~l~~L~~L~l~~n~i~~l~~l~~l~~L~~L~L~~N~i~~-~~~-l~~l~~L~~L~L~~N~l~~-l~~~~-~-~~L~~L 111 (263)
T 1xeu_A 37 QKELSGVQNFNGDNSNIQSLAGMQFFTNLKELHLSHNQISD-LSP-LKDLTKLEELSVNRNRLKN-LNGIP-S-ACLSRL 111 (263)
T ss_dssp HHHHTTCSEEECTTSCCCCCTTGGGCTTCCEEECCSSCCCC-CGG-GTTCSSCCEEECCSSCCSC-CTTCC-C-SSCCEE
T ss_pred hhhcCcCcEEECcCCCcccchHHhhCCCCCEEECCCCccCC-Chh-hccCCCCCEEECCCCccCC-cCccc-c-CcccEE
Confidence 455666677777766543 2345677777765 444 8889999999999999985 55433 3 889999
Q ss_pred eCCCCcCCccCcccccCCcccceeeccccccCCCChhhhhcCCCCCeeccCCccccCcCCCCCCCCccccccccccccc
Q 013004 125 DLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPDNGSFSQFTPISFENNLNL 203 (451)
Q Consensus 125 ~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~l 203 (451)
++++|++++ +| .++.+++|+.|++++|++++. | .+..+++|+.|++++|++++. +....+..+..+.+.+|...
T Consensus 112 ~L~~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~-~~l~~l~~L~~L~l~~N~~~ 185 (263)
T 1xeu_A 112 FLDNNELRD-TD-SLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITNT-GGLTRLKKVNWIDLTGQKCV 185 (263)
T ss_dssp ECCSSCCSB-SG-GGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCBC-TTSTTCCCCCEEEEEEEEEE
T ss_pred EccCCccCC-Ch-hhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcch-HHhccCCCCCEEeCCCCccc
Confidence 999999985 44 588899999999999999864 5 688889999999999999876 55555667777777777533
No 356
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.40 E-value=1.7e-13 Score=142.11 Aligned_cols=127 Identities=27% Similarity=0.310 Sum_probs=88.9
Q ss_pred hhhhhhccCCCcceEE------------EeecCCccccccCCccccCCCCCCEEeCcCCccCccCCccccCCCCCcEEeC
Q 013004 59 IFIRVLQSSSNLFVYL------------ISDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDL 126 (451)
Q Consensus 59 ~~~~~l~~~~n~~~~~------------~~~l~~n~~~g~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l 126 (451)
..++.|++++|.+... .++|++|.+++..|..++.+++|++|++++|++++..|..++.+++|++|++
T Consensus 26 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 105 (549)
T 2z81_A 26 AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNL 105 (549)
T ss_dssp TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEEC
T ss_pred CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEEC
Confidence 4566666666655432 3456666676666667777888888888888887666666777888888888
Q ss_pred CCCcCCc-cCcccccCCcccceeeccccccCCCCh-hhhhcCCCCCeeccCCccccCcCCC
Q 013004 127 YSNLFNG-TIPDTLANLKQLKYLRLNNNSLSGLIP-TSLTTITSLNILDLSNNRLSGPVPD 185 (451)
Q Consensus 127 s~N~l~g-~~p~~~~~l~~L~~L~ls~N~l~~~~p-~~~~~l~~L~~l~ls~N~l~~~~p~ 185 (451)
++|.+++ ..|..++++++|++|++++|.+.+.+| ..+..+++|+.|++++|.+++.+|.
T Consensus 106 s~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 166 (549)
T 2z81_A 106 MGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQ 166 (549)
T ss_dssp TTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTT
T ss_pred CCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChh
Confidence 8887775 356677777788888888777444444 5677777788888888877776654
No 357
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.40 E-value=1.9e-13 Score=142.41 Aligned_cols=146 Identities=23% Similarity=0.275 Sum_probs=104.2
Q ss_pred hhhhhhhhccCCCcce------------EEEeecCCccccc--cCCccccCCCCCCEEeCcCCccCccCCcc-ccCCCCC
Q 013004 57 FLIFIRVLQSSSNLFV------------YLISDLGNAALSG--ELAPELGQLKNLELLELYGNNLSGHIPSA-LGNLIKL 121 (451)
Q Consensus 57 ~~~~~~~l~~~~n~~~------------~~~~~l~~n~~~g--~~p~~l~~l~~L~~L~ls~N~l~~~~p~~-~~~l~~L 121 (451)
.+..++.|++++|.+. +..++|++|.+++ .+|..++.+++|+.|++++|++++.+|.. +..+++|
T Consensus 351 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L 430 (562)
T 3a79_B 351 SPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESI 430 (562)
T ss_dssp SCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTC
T ss_pred CCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccC
Confidence 3445555665555443 2345666777765 34566888888888888888888756654 7778888
Q ss_pred cEEeCCCCcCCccCcccccCCcccceeeccccccCCCChhhhhcCCCCCeeccCCccccCcCCC-CCCCCcccccccccc
Q 013004 122 KSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPD-NGSFSQFTPISFENN 200 (451)
Q Consensus 122 ~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~-~~~~~~~~~~~~~~n 200 (451)
+.|++++|++++.+|..+. ++|+.|+|++|+++ .+|..+..+++|+.|++++|++++.++. ...+..+..+.+.+|
T Consensus 431 ~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N 507 (562)
T 3a79_B 431 LVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDN 507 (562)
T ss_dssp CEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCSC
T ss_pred CEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecCC
Confidence 8888888888877776554 67888888888887 5677677888888888888888854443 345566677777777
Q ss_pred cccCC
Q 013004 201 LNLCG 205 (451)
Q Consensus 201 ~~lCg 205 (451)
+-.|.
T Consensus 508 ~~~c~ 512 (562)
T 3a79_B 508 PWDCT 512 (562)
T ss_dssp CBCCC
T ss_pred CcCCC
Confidence 76653
No 358
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.39 E-value=1.2e-12 Score=114.46 Aligned_cols=106 Identities=26% Similarity=0.351 Sum_probs=92.9
Q ss_pred CCEEeCcCCccCccCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeeccccccCCCChhhhhcCCCCCeeccCC
Q 013004 97 LELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSN 176 (451)
Q Consensus 97 L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~ 176 (451)
.+.+++++|.++ .+|..+. ++|+.|+|++|++++..|..|+++++|++|+|++|++++..|..+..+++|+.|++++
T Consensus 11 ~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 578999999999 6887774 8999999999999988899999999999999999999988777889999999999999
Q ss_pred ccccCcCCC-CCCCCcccccccccccccCC
Q 013004 177 NRLSGPVPD-NGSFSQFTPISFENNLNLCG 205 (451)
Q Consensus 177 N~l~~~~p~-~~~~~~~~~~~~~~n~~lCg 205 (451)
|++++.++. ...+.++..+.+.+|+..|.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 117 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDCA 117 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCTT
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCCC
Confidence 999987775 45677788888888875553
No 359
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.39 E-value=1.3e-12 Score=114.77 Aligned_cols=105 Identities=24% Similarity=0.308 Sum_probs=91.4
Q ss_pred CCEEeCcCCccCccCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeeccccccCCCChhhhhcCCCCCeeccCC
Q 013004 97 LELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSN 176 (451)
Q Consensus 97 L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~ 176 (451)
-+.+++++|+++ .+|..+. ++|+.|+|++|++++..|..|+++++|++|+|++|++++..+..+..+++|+.|++++
T Consensus 14 ~~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 14 QTLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SSEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CcEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 378999999997 7888775 8999999999999988899999999999999999999987667789999999999999
Q ss_pred ccccCcCCC-CCCCCcccccccccccccC
Q 013004 177 NRLSGPVPD-NGSFSQFTPISFENNLNLC 204 (451)
Q Consensus 177 N~l~~~~p~-~~~~~~~~~~~~~~n~~lC 204 (451)
|+|++.++. ...+.++..+.+.+|+-.|
T Consensus 91 N~l~~l~~~~~~~l~~L~~L~L~~N~~~c 119 (174)
T 2r9u_A 91 NHLKSIPRGAFDNLKSLTHIYLYNNPWDC 119 (174)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCBCT
T ss_pred CccceeCHHHhccccCCCEEEeCCCCccc
Confidence 999987765 4556777888888886554
No 360
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.39 E-value=2.8e-13 Score=144.26 Aligned_cols=147 Identities=22% Similarity=0.265 Sum_probs=115.8
Q ss_pred hhhhhhhhhhccCCCcc----------------eEEEeecCCccccccCCccccCCCCCCEEeCcCCccCccCC-ccccC
Q 013004 55 ISFLIFIRVLQSSSNLF----------------VYLISDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIP-SALGN 117 (451)
Q Consensus 55 ~~~~~~~~~l~~~~n~~----------------~~~~~~l~~n~~~g~~p~~l~~l~~L~~L~ls~N~l~~~~p-~~~~~ 117 (451)
+..++.|+.|++++|.+ .+..+++++|.+++..|..+..+++|+.|++++|.+++.+| ..+..
T Consensus 349 ~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~ 428 (680)
T 1ziw_A 349 FTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRG 428 (680)
T ss_dssp TTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSGGGTT
T ss_pred hccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCcccccC
Confidence 56677888888887752 24456788899988888889999999999999999987776 67888
Q ss_pred CCCCcEEeCCCCcCCccCcccccCCcccceeeccccccC--CCChhhhhcCCCCCeeccCCccccCcCCC-CCCCCcccc
Q 013004 118 LIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLS--GLIPTSLTTITSLNILDLSNNRLSGPVPD-NGSFSQFTP 194 (451)
Q Consensus 118 l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~--~~~p~~~~~l~~L~~l~ls~N~l~~~~p~-~~~~~~~~~ 194 (451)
+++|+.|++++|++.+..|..+..+++|+.|++++|.++ +.+|..+..+++|+.|++++|.+++.+|. ...+..+..
T Consensus 429 l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~ 508 (680)
T 1ziw_A 429 LENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEI 508 (680)
T ss_dssp CTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred cccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhccccccCE
Confidence 999999999999988777778888888888888888876 45778888888888888888888876654 244556666
Q ss_pred ccccccc
Q 013004 195 ISFENNL 201 (451)
Q Consensus 195 ~~~~~n~ 201 (451)
+.+.+|.
T Consensus 509 L~Ls~N~ 515 (680)
T 1ziw_A 509 LDLQHNN 515 (680)
T ss_dssp EECCSSC
T ss_pred EeCCCCC
Confidence 6666653
No 361
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.37 E-value=5.7e-13 Score=138.18 Aligned_cols=128 Identities=20% Similarity=0.202 Sum_probs=110.5
Q ss_pred EEEeecCCccccccCCccccCCCCCCEEeCcCCccCccCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeeccc
Q 013004 73 YLISDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNN 152 (451)
Q Consensus 73 ~~~~~l~~n~~~g~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~ 152 (451)
+..++|++|.+++..|..++.+++|++|++++|++++..|..|+.+++|+.|+|++|++++..|..++++++|++|++++
T Consensus 28 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~ 107 (549)
T 2z81_A 28 MKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMG 107 (549)
T ss_dssp CCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTT
T ss_pred ccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCC
Confidence 45689999999988889999999999999999999988889999999999999999999987777799999999999999
Q ss_pred cccCC-CChhhhhcCCCCCeeccCCccccCcCCC--CCCCCcccccccccc
Q 013004 153 NSLSG-LIPTSLTTITSLNILDLSNNRLSGPVPD--NGSFSQFTPISFENN 200 (451)
Q Consensus 153 N~l~~-~~p~~~~~l~~L~~l~ls~N~l~~~~p~--~~~~~~~~~~~~~~n 200 (451)
|.+++ .+|..++.+++|+.|++++|.+.+.+|. ...+..++...+.+|
T Consensus 108 n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n 158 (549)
T 2z81_A 108 NPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKAL 158 (549)
T ss_dssp CCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEET
T ss_pred CcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCC
Confidence 99986 3577899999999999999996666653 344556666655554
No 362
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.37 E-value=6.2e-13 Score=116.89 Aligned_cols=104 Identities=22% Similarity=0.233 Sum_probs=79.2
Q ss_pred EEeecCCccccccCCccccCCC-CCCEEeCcCCccCccCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeeccc
Q 013004 74 LISDLGNAALSGELAPELGQLK-NLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNN 152 (451)
Q Consensus 74 ~~~~l~~n~~~g~~p~~l~~l~-~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~ 152 (451)
..+++++|.++ .+| .+..+. +|+.|++++|.+++. +.++.+++|+.|++++|++++..|..++.+++|++|++++
T Consensus 22 ~~L~l~~n~l~-~i~-~~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 97 (176)
T 1a9n_A 22 RELDLRGYKIP-VIE-NLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTN 97 (176)
T ss_dssp EEEECTTSCCC-SCC-CGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECCS
T ss_pred eEEEeeCCCCc-hhH-HhhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEECCC
Confidence 44555566655 344 355555 899999999998864 5788889999999999999854444458888999999999
Q ss_pred cccCCCChh--hhhcCCCCCeeccCCccccCc
Q 013004 153 NSLSGLIPT--SLTTITSLNILDLSNNRLSGP 182 (451)
Q Consensus 153 N~l~~~~p~--~~~~l~~L~~l~ls~N~l~~~ 182 (451)
|+++ .+|. .+..+++|+.|++++|+++..
T Consensus 98 N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~~ 128 (176)
T 1a9n_A 98 NSLV-ELGDLDPLASLKSLTYLCILRNPVTNK 128 (176)
T ss_dssp CCCC-CGGGGGGGGGCTTCCEEECCSSGGGGS
T ss_pred CcCC-cchhhHhhhcCCCCCEEEecCCCCCCc
Confidence 9986 4565 788888899999999988753
No 363
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.36 E-value=6.7e-13 Score=139.03 Aligned_cols=143 Identities=24% Similarity=0.253 Sum_probs=122.4
Q ss_pred cceEEEeehhHHHhhhhcchhhhhhhhhhhhhccCCCcceE----------EEeecCCccccccCCccccCCCCCCEEeC
Q 013004 33 RGFTLLVTLKAVLQECEQLHLLISFLIFIRVLQSSSNLFVY----------LISDLGNAALSGELAPELGQLKNLELLEL 102 (451)
Q Consensus 33 ~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~l~~~~n~~~~----------~~~~l~~n~~~g~~p~~l~~l~~L~~L~l 102 (451)
..+..|..|....+.+..+++ ++.+..|+.|++++|.+.. ..++|++|.+++ .+.++.|++|+.|+|
T Consensus 62 ~~l~~L~~L~Ls~N~l~~~~~-l~~l~~L~~L~Ls~N~l~~l~~l~~l~~L~~L~Ls~N~l~~--l~~l~~l~~L~~L~L 138 (605)
T 1m9s_A 62 QYLPNVTKLFLNGNKLTDIKP-LTNLKNLGWLFLDENKIKDLSSLKDLKKLKSLSLEHNGISD--INGLVHLPQLESLYL 138 (605)
T ss_dssp GGCTTCCEEECTTSCCCCCGG-GGGCTTCCEEECCSSCCCCCTTSTTCTTCCEEECTTSCCCC--CGGGGGCTTCSEEEC
T ss_pred ccCCCCCEEEeeCCCCCCChh-hccCCCCCEEECcCCCCCCChhhccCCCCCEEEecCCCCCC--CccccCCCccCEEEC
Confidence 456667777777777777777 7888999999999997653 467899999986 367999999999999
Q ss_pred cCCccCccCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeeccccccCCCChhhhhcCCCCCeeccCCccccCc
Q 013004 103 YGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSNNRLSGP 182 (451)
Q Consensus 103 s~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~ 182 (451)
++|.+++. +.+..+++|+.|+|++|++++..| +..+++|+.|+|++|++++. | .+..+++|+.|++++|++++.
T Consensus 139 s~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l-~-~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 139 GNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp CSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEECCSEEEECC
T ss_pred CCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCCC-h-HHccCCCCCEEEccCCcCcCC
Confidence 99999965 679999999999999999996655 89999999999999999874 4 589999999999999999875
Q ss_pred CC
Q 013004 183 VP 184 (451)
Q Consensus 183 ~p 184 (451)
+.
T Consensus 213 p~ 214 (605)
T 1m9s_A 213 PI 214 (605)
T ss_dssp CC
T ss_pred cc
Confidence 43
No 364
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.35 E-value=3.1e-12 Score=121.93 Aligned_cols=136 Identities=31% Similarity=0.402 Sum_probs=100.6
Q ss_pred hhhhhhhhhccCCCcce----------EEEeecCCccccccCCccccCCCCCCEEeCcCCccCccCCccccCCCCCcEEe
Q 013004 56 SFLIFIRVLQSSSNLFV----------YLISDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLD 125 (451)
Q Consensus 56 ~~~~~~~~l~~~~n~~~----------~~~~~l~~n~~~g~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ 125 (451)
..+..++.|++++|.+. +..++|++|.+++ +++ ++.+++|+.|++++|.+++ +| .+..+++|+.|+
T Consensus 43 ~~l~~L~~L~l~~~~i~~~~~~~~l~~L~~L~L~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~ 118 (291)
T 1h6t_A 43 NELNSIDQIIANNSDIKSVQGIQYLPNVTKLFLNGNKLTD-IKP-LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLS 118 (291)
T ss_dssp HHHHTCCEEECTTSCCCCCTTGGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEE
T ss_pred hhcCcccEEEccCCCcccChhHhcCCCCCEEEccCCccCC-Ccc-cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEE
Confidence 45666777777777653 3456788888876 444 7888888888888888875 33 488888888888
Q ss_pred CCCCcCCccCcccccCCcccceeeccccccCCCChhhhhcCCCCCeeccCCccccCcCCCCCCCCcccccccccc
Q 013004 126 LYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPDNGSFSQFTPISFENN 200 (451)
Q Consensus 126 ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n 200 (451)
+++|++++ + +.+..+++|+.|++++|++++. ..+..+++|+.|++++|.+++..| ...+..+..+.+.+|
T Consensus 119 L~~n~i~~-~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~-l~~l~~L~~L~L~~N 188 (291)
T 1h6t_A 119 LEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP-LAGLTKLQNLYLSKN 188 (291)
T ss_dssp CTTSCCCC-C-GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG-GTTCTTCCEEECCSS
T ss_pred CCCCcCCC-C-hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh-hcCCCccCEEECCCC
Confidence 88888874 4 4577888888888888888764 567888888888888888887655 445566666666555
No 365
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.35 E-value=5.9e-13 Score=138.18 Aligned_cols=68 Identities=26% Similarity=0.350 Sum_probs=28.3
Q ss_pred ecCCccccccCCccccCCCCCCEEeCcCCccCccCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeeccccccC
Q 013004 77 DLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLS 156 (451)
Q Consensus 77 ~l~~n~~~g~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~ 156 (451)
+|++|.+++ +|. .+++|+.|+|++|++++ +|. .+++|+.|+|++|++++ +|. +. ++|+.|+|++|+++
T Consensus 126 ~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~ 193 (571)
T 3cvr_A 126 DVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE 193 (571)
T ss_dssp ECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS
T ss_pred ECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC
Confidence 344444443 333 33444444444444442 333 23444444444444442 333 32 34444444444444
No 366
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.34 E-value=4.8e-13 Score=117.60 Aligned_cols=102 Identities=23% Similarity=0.292 Sum_probs=84.5
Q ss_pred eecCCccccccCCccccCCCCCCEEeCcCCccCccCCccccCCCCCcEEeCCCCcCCccCcc--cccCCcccceeecccc
Q 013004 76 SDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPD--TLANLKQLKYLRLNNN 153 (451)
Q Consensus 76 ~~l~~n~~~g~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~--~~~~l~~L~~L~ls~N 153 (451)
++|++|.+++ + +.++.+++|+.|++++|++++..|..+..+++|+.|++++|+++ .+|. .++.+++|+.|++++|
T Consensus 47 L~Ls~N~l~~-~-~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N 123 (176)
T 1a9n_A 47 IDFSDNEIRK-L-DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLV-ELGDLDPLASLKSLTYLCILRN 123 (176)
T ss_dssp EECCSSCCCE-E-CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSS
T ss_pred EECCCCCCCc-c-cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCC
Confidence 3444445544 2 57889999999999999999654444599999999999999996 6776 7899999999999999
Q ss_pred ccCCCChhh----hhcCCCCCeeccCCccccC
Q 013004 154 SLSGLIPTS----LTTITSLNILDLSNNRLSG 181 (451)
Q Consensus 154 ~l~~~~p~~----~~~l~~L~~l~ls~N~l~~ 181 (451)
+++. +|.. +..+++|+.||++.|....
T Consensus 124 ~i~~-~~~~~~~~~~~l~~L~~Ld~~~n~~~~ 154 (176)
T 1a9n_A 124 PVTN-KKHYRLYVIYKVPQVRVLDFQKVKLKE 154 (176)
T ss_dssp GGGG-STTHHHHHHHHCTTCSEETTEECCHHH
T ss_pred CCCC-cHhHHHHHHHHCCccceeCCCcCCHHH
Confidence 9984 5664 8999999999999998754
No 367
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.34 E-value=1.1e-12 Score=133.44 Aligned_cols=157 Identities=28% Similarity=0.372 Sum_probs=102.0
Q ss_pred ceEEEeehhHHHhhhhcchhhhhhhhhhhhhccCCCcceE----------EEeecCCccccccCCccccCCCCCCEEeCc
Q 013004 34 GFTLLVTLKAVLQECEQLHLLISFLIFIRVLQSSSNLFVY----------LISDLGNAALSGELAPELGQLKNLELLELY 103 (451)
Q Consensus 34 ~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~l~~~~n~~~~----------~~~~l~~n~~~g~~p~~l~~l~~L~~L~ls 103 (451)
+++.|..|....+.+..++. +..+..|+.|++++|.+.. ..+++++|.+.+ + +.+..+++|+.|+++
T Consensus 175 ~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~l~ 251 (466)
T 1o6v_A 175 NLTTLERLDISSNKVSDISV-LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKD-I-GTLASLTNLTDLDLA 251 (466)
T ss_dssp TCTTCCEEECCSSCCCCCGG-GGGCTTCSEEECCSSCCCCCGGGGGCTTCCEEECCSSCCCC-C-GGGGGCTTCSEEECC
T ss_pred cCCCCCEEECcCCcCCCChh-hccCCCCCEEEecCCcccccccccccCCCCEEECCCCCccc-c-hhhhcCCCCCEEECC
Confidence 34445555444444444433 5566777777777776542 345667777664 2 456777778888888
Q ss_pred CCccCccCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeeccccccCCCChhhhhcCCCCCeeccCCccccCcC
Q 013004 104 GNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSNNRLSGPV 183 (451)
Q Consensus 104 ~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~ 183 (451)
+|.+++..| +..+++|+.|++++|.+++. |. +..+++|+.|++++|++++..| +..+++|+.|++++|++++..
T Consensus 252 ~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~~-~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~ 325 (466)
T 1o6v_A 252 NNQISNLAP--LSGLTKLTELKLGANQISNI-SP-LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDIS 325 (466)
T ss_dssp SSCCCCCGG--GTTCTTCSEEECCSSCCCCC-GG-GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCG
T ss_pred CCccccchh--hhcCCCCCEEECCCCccCcc-cc-ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCch
Confidence 887775544 77777777777777777743 33 6777777777777777776433 667777777777777777765
Q ss_pred CCCCCCCcccccccccc
Q 013004 184 PDNGSFSQFTPISFENN 200 (451)
Q Consensus 184 p~~~~~~~~~~~~~~~n 200 (451)
| ...+..+..+.+.+|
T Consensus 326 ~-~~~l~~L~~L~l~~n 341 (466)
T 1o6v_A 326 P-VSSLTKLQRLFFYNN 341 (466)
T ss_dssp G-GGGCTTCCEEECCSS
T ss_pred h-hccCccCCEeECCCC
Confidence 5 334555665555555
No 368
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.33 E-value=4.3e-13 Score=139.19 Aligned_cols=137 Identities=22% Similarity=0.299 Sum_probs=110.1
Q ss_pred cceEEEeehhHHHhhhhcchhhhhhhhhhhhhccCCCcce--------EEEeecCCccccccCCccccCCCCCCEEeCcC
Q 013004 33 RGFTLLVTLKAVLQECEQLHLLISFLIFIRVLQSSSNLFV--------YLISDLGNAALSGELAPELGQLKNLELLELYG 104 (451)
Q Consensus 33 ~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~l~~~~n~~~--------~~~~~l~~n~~~g~~p~~l~~l~~L~~L~ls~ 104 (451)
..++.|..|....+.++.+|. +.. .|+.|++++|.++ +..++|++|.+++ +|. .+++|+.|+|++
T Consensus 97 ~~l~~L~~L~Ls~N~l~~ip~-l~~--~L~~L~Ls~N~l~~lp~~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~ 169 (571)
T 3cvr_A 97 ELPASLEYLDACDNRLSTLPE-LPA--SLKHLDVDNNQLTMLPELPALLEYINADNNQLTM-LPE---LPTSLEVLSVRN 169 (571)
T ss_dssp CCCTTCCEEECCSSCCSCCCC-CCT--TCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCS
T ss_pred cccCCCCEEEccCCCCCCcch-hhc--CCCEEECCCCcCCCCCCcCccccEEeCCCCccCc-CCC---cCCCcCEEECCC
Confidence 334455555555556666666 433 7888888888776 3557889999987 776 688999999999
Q ss_pred CccCccCCccccCCCCCcEEeCCCCcCCccCcccccCCccc-------ceeeccccccCCCChhhhhcCCCCCeeccCCc
Q 013004 105 NNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQL-------KYLRLNNNSLSGLIPTSLTTITSLNILDLSNN 177 (451)
Q Consensus 105 N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L-------~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N 177 (451)
|++++ +|. +. ++|+.|+|++|+|+ .+|. +.. +| +.|+|++|+++ .+|..+..+++|+.|++++|
T Consensus 170 N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N 240 (571)
T 3cvr_A 170 NQLTF-LPE-LP--ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDN 240 (571)
T ss_dssp SCCSC-CCC-CC--TTCCEEECCSSCCS-SCCC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSS
T ss_pred CCCCC-cch-hh--CCCCEEECcCCCCC-chhh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCC
Confidence 99996 887 76 89999999999999 8888 665 77 99999999998 57888888999999999999
Q ss_pred cccCcCCC
Q 013004 178 RLSGPVPD 185 (451)
Q Consensus 178 ~l~~~~p~ 185 (451)
++++.+|.
T Consensus 241 ~l~~~~p~ 248 (571)
T 3cvr_A 241 PLSSRIRE 248 (571)
T ss_dssp SCCHHHHH
T ss_pred cCCCcCHH
Confidence 99998774
No 369
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.33 E-value=1.1e-12 Score=133.53 Aligned_cols=156 Identities=28% Similarity=0.363 Sum_probs=98.0
Q ss_pred eEEEeehhHHHhhhhcchhhhhhhhhhhhhccCCCcce----------EEEeecCCccccccCCccccCCCCCCEEeCcC
Q 013004 35 FTLLVTLKAVLQECEQLHLLISFLIFIRVLQSSSNLFV----------YLISDLGNAALSGELAPELGQLKNLELLELYG 104 (451)
Q Consensus 35 ~~~~~~l~~~~~~~~~l~~~~~~~~~~~~l~~~~n~~~----------~~~~~l~~n~~~g~~p~~l~~l~~L~~L~ls~ 104 (451)
+..|..|....+.+..+++ ++.+..|+.|++++|.+. +..+++++|.+++..| ++.+++|+.|++++
T Consensus 198 l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~ 274 (466)
T 1o6v_A 198 LTNLESLIATNNQISDITP-LGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGA 274 (466)
T ss_dssp CTTCSEEECCSSCCCCCGG-GGGCTTCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCS
T ss_pred CCCCCEEEecCCccccccc-ccccCCCCEEECCCCCcccchhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCC
Confidence 3344444433344444443 556677777777777654 2345677777765333 67777777777777
Q ss_pred CccCccCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeeccccccCCCChhhhhcCCCCCeeccCCccccCcCC
Q 013004 105 NNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVP 184 (451)
Q Consensus 105 N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p 184 (451)
|.+++..| +..+++|+.|++++|++++..| ++.+++|+.|++++|++++..| +..+++|+.|++++|.+++. +
T Consensus 275 n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~ 347 (466)
T 1o6v_A 275 NQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV-S 347 (466)
T ss_dssp SCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC-G
T ss_pred CccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc-h
Confidence 77775433 6777777777777777774333 6677777777777777776544 56677777777777777664 3
Q ss_pred CCCCCCcccccccccc
Q 013004 185 DNGSFSQFTPISFENN 200 (451)
Q Consensus 185 ~~~~~~~~~~~~~~~n 200 (451)
....+.++..+.+.+|
T Consensus 348 ~l~~l~~L~~L~l~~n 363 (466)
T 1o6v_A 348 SLANLTNINWLSAGHN 363 (466)
T ss_dssp GGTTCTTCCEEECCSS
T ss_pred hhccCCCCCEEeCCCC
Confidence 3444555555555555
No 370
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.32 E-value=1.7e-12 Score=131.78 Aligned_cols=140 Identities=21% Similarity=0.178 Sum_probs=107.7
Q ss_pred ccceEEEeehhHHHhhhhcchhhhhhhhhhhhhccCCCcceE---------EEeecCCccccccCCccccCCCCCCEEeC
Q 013004 32 ARGFTLLVTLKAVLQECEQLHLLISFLIFIRVLQSSSNLFVY---------LISDLGNAALSGELAPELGQLKNLELLEL 102 (451)
Q Consensus 32 ~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~l~~~~n~~~~---------~~~~l~~n~~~g~~p~~l~~l~~L~~L~l 102 (451)
..+++.|..|....+.+..++ ++.+..|+.|++++|.++. ..+++++|...+.+ .++.+++|+.|++
T Consensus 102 ~~~l~~L~~L~L~~N~l~~l~--~~~l~~L~~L~l~~N~l~~l~l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l 177 (457)
T 3bz5_A 102 VTPLTKLTYLNCDTNKLTKLD--VSQNPLLTYLNCARNTLTEIDVSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDC 177 (457)
T ss_dssp CTTCTTCCEEECCSSCCSCCC--CTTCTTCCEEECTTSCCSCCCCTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEEC
T ss_pred cCCCCcCCEEECCCCcCCeec--CCCCCcCCEEECCCCccceeccccCCcCCEEECCCCCccccc--ccccCCcCCEEEC
Confidence 345556666666666666665 6778888888888887754 34567777666666 4778889999999
Q ss_pred cCCccCccCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeeccccccCCCChhhhhcCCCCCeeccCCccccCc
Q 013004 103 YGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSNNRLSGP 182 (451)
Q Consensus 103 s~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~ 182 (451)
++|++++ +| ++.+++|+.|++++|++++. .++.+++|+.|++++|++++ +| ++.+++|+.|++++|++++.
T Consensus 178 s~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~ 248 (457)
T 3bz5_A 178 SFNKITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTEL 248 (457)
T ss_dssp CSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCC
T ss_pred CCCccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCc
Confidence 9999886 55 78888899999999988854 37888888899999999887 56 77888888899999988886
Q ss_pred CC
Q 013004 183 VP 184 (451)
Q Consensus 183 ~p 184 (451)
++
T Consensus 249 ~~ 250 (457)
T 3bz5_A 249 DV 250 (457)
T ss_dssp CC
T ss_pred CH
Confidence 43
No 371
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.31 E-value=7.2e-13 Score=127.88 Aligned_cols=155 Identities=19% Similarity=0.138 Sum_probs=104.1
Q ss_pred EEeehhHHHhhhhcch-hhhhhhhhhhhhccCCCcceEE----------EeecCCccccccCCccccCCCCCCEEeCcCC
Q 013004 37 LLVTLKAVLQECEQLH-LLISFLIFIRVLQSSSNLFVYL----------ISDLGNAALSGELAPELGQLKNLELLELYGN 105 (451)
Q Consensus 37 ~~~~l~~~~~~~~~l~-~~~~~~~~~~~l~~~~n~~~~~----------~~~l~~n~~~g~~p~~l~~l~~L~~L~ls~N 105 (451)
.++.|....+.+..++ ..++.+..|+.|++++|.+... .++|++|.+++ +| .+++|+.|++++|
T Consensus 35 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~-l~----~~~~L~~L~l~~n 109 (317)
T 3o53_A 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLDLESLSTLRTLDLNNNYVQE-LL----VGPSIETLHAANN 109 (317)
T ss_dssp GCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEEETTCTTCCEEECCSSEEEE-EE----ECTTCCEEECCSS
T ss_pred CCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchhhhhcCCCCEEECcCCcccc-cc----CCCCcCEEECCCC
Confidence 3444444444455544 3456666777777777766532 34555666553 22 2366677777777
Q ss_pred ccCccCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeeccccccCCCChhhhh-cCCCCCeeccCCccccCcCC
Q 013004 106 NLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLT-TITSLNILDLSNNRLSGPVP 184 (451)
Q Consensus 106 ~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~-~l~~L~~l~ls~N~l~~~~p 184 (451)
++++..+. .+++|+.|++++|++++..|..++.+++|++|++++|.+++..|..+. .+++|+.|++++|.+++..
T Consensus 110 ~l~~~~~~---~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~- 185 (317)
T 3o53_A 110 NISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVK- 185 (317)
T ss_dssp CCSEEEEC---CCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEE-
T ss_pred ccCCcCcc---ccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCcccc-
Confidence 77654433 357788888888888877777888888999999999999877677664 6888999999999888763
Q ss_pred CCCCCCcccccccccc
Q 013004 185 DNGSFSQFTPISFENN 200 (451)
Q Consensus 185 ~~~~~~~~~~~~~~~n 200 (451)
....+.++..+.+.+|
T Consensus 186 ~~~~l~~L~~L~Ls~N 201 (317)
T 3o53_A 186 GQVVFAKLKTLDLSSN 201 (317)
T ss_dssp CCCCCTTCCEEECCSS
T ss_pred cccccccCCEEECCCC
Confidence 3334666776666665
No 372
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.31 E-value=1.4e-12 Score=122.48 Aligned_cols=134 Identities=25% Similarity=0.265 Sum_probs=104.7
Q ss_pred hhhhhhhccCCCcce----------EEEeecCCccccccCCccccCCCCCCEEeCcCCccCccCCccccCCCCCcEEeCC
Q 013004 58 LIFIRVLQSSSNLFV----------YLISDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLY 127 (451)
Q Consensus 58 ~~~~~~l~~~~n~~~----------~~~~~l~~n~~~g~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls 127 (451)
+..+..++++.|.+. +..+++++|.++. +| .++.+++|+.|+|++|++++. |+ +..+++|+.|+|+
T Consensus 18 l~~l~~l~l~~~~i~~~~~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~-~~-l~~l~~L~~L~L~ 93 (263)
T 1xeu_A 18 LANAVKQNLGKQSVTDLVSQKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDL-SP-LKDLTKLEELSVN 93 (263)
T ss_dssp HHHHHHHHHTCSCTTSEECHHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCSSCCEEECC
T ss_pred HHHHHHHHhcCCCcccccchhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCC-hh-hccCCCCCEEECC
Confidence 344555555555543 2356889998874 66 789999999999999999964 44 9999999999999
Q ss_pred CCcCCccCcccccCCcccceeeccccccCCCChhhhhcCCCCCeeccCCccccCcCCCCCCCCccccccccccc
Q 013004 128 SNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPDNGSFSQFTPISFENNL 201 (451)
Q Consensus 128 ~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~ 201 (451)
+|++++ +|... . ++|+.|++++|++++ +| .+..+++|+.|++++|++++. |....+..+..+.+.+|.
T Consensus 94 ~N~l~~-l~~~~-~-~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~~-~~l~~l~~L~~L~L~~N~ 161 (263)
T 1xeu_A 94 RNRLKN-LNGIP-S-ACLSRLFLDNNELRD-TD-SLIHLKNLEILSIRNNKLKSI-VMLGFLSKLEVLDLHGNE 161 (263)
T ss_dssp SSCCSC-CTTCC-C-SSCCEEECCSSCCSB-SG-GGTTCTTCCEEECTTSCCCBC-GGGGGCTTCCEEECTTSC
T ss_pred CCccCC-cCccc-c-CcccEEEccCCccCC-Ch-hhcCcccccEEECCCCcCCCC-hHHccCCCCCEEECCCCc
Confidence 999984 56533 3 899999999999986 44 589999999999999999975 444556667777666663
No 373
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.29 E-value=1.9e-12 Score=126.21 Aligned_cols=138 Identities=22% Similarity=0.336 Sum_probs=110.2
Q ss_pred EEEeehhHHHhhhhcchhhhhhhhhhhhhccCCCcceE----------EEeecCCccccccCCccccCCCCCCEEeCcCC
Q 013004 36 TLLVTLKAVLQECEQLHLLISFLIFIRVLQSSSNLFVY----------LISDLGNAALSGELAPELGQLKNLELLELYGN 105 (451)
Q Consensus 36 ~~~~~l~~~~~~~~~l~~~~~~~~~~~~l~~~~n~~~~----------~~~~l~~n~~~g~~p~~l~~l~~L~~L~ls~N 105 (451)
..+..+....+.+..++. +..+..|+.|++++|.+.. ..+++++|.+++ + +.+..+++|+.|++++|
T Consensus 199 ~~L~~L~l~~n~l~~~~~-~~~~~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~l~~n 275 (347)
T 4fmz_A 199 TSLHYFTAYVNQITDITP-VANMTRLNSLKIGNNKITDLSPLANLSQLTWLEIGTNQISD-I-NAVKDLTKLKMLNVGSN 275 (347)
T ss_dssp TTCCEEECCSSCCCCCGG-GGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCC-C-GGGTTCTTCCEEECCSS
T ss_pred CccceeecccCCCCCCch-hhcCCcCCEEEccCCccCCCcchhcCCCCCEEECCCCccCC-C-hhHhcCCCcCEEEccCC
Confidence 333444433344444444 5667788888888887653 356888888876 3 57899999999999999
Q ss_pred ccCccCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeeccccccCCCChhhhhcCCCCCeeccCCcccc
Q 013004 106 NLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSNNRLS 180 (451)
Q Consensus 106 ~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~ 180 (451)
.+++. +.+..+++|+.|++++|.+++..|..++.+++|+.|++++|++++..| +..+++|+.||+++|.++
T Consensus 276 ~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 276 QISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp CCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred ccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 99964 468999999999999999998889999999999999999999998766 889999999999999986
No 374
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.28 E-value=4.4e-12 Score=128.68 Aligned_cols=155 Identities=19% Similarity=0.193 Sum_probs=125.3
Q ss_pred ccceEEEeehhHHHhhhhcchhhhhhhhhhhhhccCCCcceE---------EEeecCCccccccCCccccCCCCCCEEeC
Q 013004 32 ARGFTLLVTLKAVLQECEQLHLLISFLIFIRVLQSSSNLFVY---------LISDLGNAALSGELAPELGQLKNLELLEL 102 (451)
Q Consensus 32 ~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~l~~~~n~~~~---------~~~~l~~n~~~g~~p~~l~~l~~L~~L~l 102 (451)
...++.|+.|....+.+..++ ++.++.|+.|++++|.++. ..+++++|.+++ +| ++.+++|+.|++
T Consensus 81 ~~~l~~L~~L~Ls~N~l~~~~--~~~l~~L~~L~L~~N~l~~l~~~~l~~L~~L~l~~N~l~~-l~--l~~l~~L~~L~l 155 (457)
T 3bz5_A 81 LSQNTNLTYLACDSNKLTNLD--VTPLTKLTYLNCDTNKLTKLDVSQNPLLTYLNCARNTLTE-ID--VSHNTQLTELDC 155 (457)
T ss_dssp CTTCTTCSEEECCSSCCSCCC--CTTCTTCCEEECCSSCCSCCCCTTCTTCCEEECTTSCCSC-CC--CTTCTTCCEEEC
T ss_pred cccCCCCCEEECcCCCCceee--cCCCCcCCEEECCCCcCCeecCCCCCcCCEEECCCCccce-ec--cccCCcCCEEEC
Confidence 345556666666666666665 6788899999999997753 356788999987 43 889999999999
Q ss_pred cCCccCccCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeeccccccCCCChhhhhcCCCCCeeccCCccccCc
Q 013004 103 YGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSNNRLSGP 182 (451)
Q Consensus 103 s~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~ 182 (451)
++|+..+.+ .++.+++|+.|++++|++++ +| ++.+++|+.|++++|++++. + ++.+++|+.|++++|++++
T Consensus 156 ~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~-~--l~~l~~L~~L~Ls~N~l~~- 226 (457)
T 3bz5_A 156 HLNKKITKL--DVTPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL-D--LNQNIQLTFLDCSSNKLTE- 226 (457)
T ss_dssp TTCSCCCCC--CCTTCTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSC-
T ss_pred CCCCccccc--ccccCCcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee-c--cccCCCCCEEECcCCcccc-
Confidence 999776677 48899999999999999995 66 88999999999999999875 3 8889999999999999998
Q ss_pred CCCCCCCCccccccccccc
Q 013004 183 VPDNGSFSQFTPISFENNL 201 (451)
Q Consensus 183 ~p~~~~~~~~~~~~~~~n~ 201 (451)
+| ...+..+..+.+.+|.
T Consensus 227 ip-~~~l~~L~~L~l~~N~ 244 (457)
T 3bz5_A 227 ID-VTPLTQLTYFDCSVNP 244 (457)
T ss_dssp CC-CTTCTTCSEEECCSSC
T ss_pred cC-ccccCCCCEEEeeCCc
Confidence 56 5567777777777763
No 375
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.28 E-value=7.6e-12 Score=122.09 Aligned_cols=110 Identities=17% Similarity=0.137 Sum_probs=93.6
Q ss_pred CCCCCCEEeCcCC-ccCccCCccccCCCCCcEEeCCC-CcCCccCcccccCCcccceeeccccccCCCChhhhhcCCCCC
Q 013004 93 QLKNLELLELYGN-NLSGHIPSALGNLIKLKSLDLYS-NLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLN 170 (451)
Q Consensus 93 ~l~~L~~L~ls~N-~l~~~~p~~~~~l~~L~~L~ls~-N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~ 170 (451)
.|.. ..++.+++ +|+ .+|. +..+++|+.|+|++ |+|++..|..|++|++|+.|+|++|+|++.+|..|..+++|+
T Consensus 7 ~C~~-~~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~ 83 (347)
T 2ifg_A 7 PHGS-SGLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLS 83 (347)
T ss_dssp CSSS-SCEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCC
T ss_pred cccC-CEEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCC
Confidence 4443 45799998 898 6888 99999999999996 999987778999999999999999999999999999999999
Q ss_pred eeccCCccccCcCCCCCCCCcccccccccccccCC
Q 013004 171 ILDLSNNRLSGPVPDNGSFSQFTPISFENNLNLCG 205 (451)
Q Consensus 171 ~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lCg 205 (451)
.|||++|+|++.++.......+..+.+.+|..-|.
T Consensus 84 ~L~l~~N~l~~~~~~~~~~~~L~~l~l~~N~~~c~ 118 (347)
T 2ifg_A 84 RLNLSFNALESLSWKTVQGLSLQELVLSGNPLHCS 118 (347)
T ss_dssp EEECCSSCCSCCCSTTTCSCCCCEEECCSSCCCCC
T ss_pred EEeCCCCccceeCHHHcccCCceEEEeeCCCccCC
Confidence 99999999998777654433477777888876654
No 376
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.26 E-value=1.1e-13 Score=137.27 Aligned_cols=91 Identities=24% Similarity=0.316 Sum_probs=40.8
Q ss_pred ccCCCCCCEEeCcCCccC--c---cCCccccCCCCCcEEeCCCCcCC----ccCcccccCCcccceeeccccccCCC---
Q 013004 91 LGQLKNLELLELYGNNLS--G---HIPSALGNLIKLKSLDLYSNLFN----GTIPDTLANLKQLKYLRLNNNSLSGL--- 158 (451)
Q Consensus 91 l~~l~~L~~L~ls~N~l~--~---~~p~~~~~l~~L~~L~ls~N~l~----g~~p~~~~~l~~L~~L~ls~N~l~~~--- 158 (451)
+..+++|+.|++++|+++ | .+|..+..+++|+.|+|++|.++ +.+|..+..+++|+.|+|++|.+++.
T Consensus 183 l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~ 262 (386)
T 2ca6_A 183 FQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAA 262 (386)
T ss_dssp HHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHH
T ss_pred HHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHH
Confidence 334444444444444444 1 22224444444555555555443 33444444444455555555544433
Q ss_pred -Chhhhhc--CCCCCeeccCCccccC
Q 013004 159 -IPTSLTT--ITSLNILDLSNNRLSG 181 (451)
Q Consensus 159 -~p~~~~~--l~~L~~l~ls~N~l~~ 181 (451)
+|..+.. +++|+.|++++|.+++
T Consensus 263 ~l~~~l~~~~~~~L~~L~L~~n~i~~ 288 (386)
T 2ca6_A 263 AVVDAFSKLENIGLQTLRLQYNEIEL 288 (386)
T ss_dssp HHHHHHHTCSSCCCCEEECCSSCCBH
T ss_pred HHHHHHhhccCCCeEEEECcCCcCCH
Confidence 2333322 4445555555554444
No 377
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.26 E-value=5.5e-14 Score=126.14 Aligned_cols=87 Identities=28% Similarity=0.414 Sum_probs=42.9
Q ss_pred cccCCCCCCEEeCcCCccCccCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeeccccccCCCChhhhhcCCCC
Q 013004 90 ELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSL 169 (451)
Q Consensus 90 ~l~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L 169 (451)
.++.+++|+.|++++|++++ +| .+..+++|+.|++++|.++ .+|..+..+++|+.|++++|++++ +| .+..+++|
T Consensus 43 ~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L 117 (198)
T 1ds9_A 43 TLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNL 117 (198)
T ss_dssp HHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHS
T ss_pred HHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCC
Confidence 44455555555555555543 44 4455555555555555554 444444444555555555555543 23 34444455
Q ss_pred CeeccCCccccC
Q 013004 170 NILDLSNNRLSG 181 (451)
Q Consensus 170 ~~l~ls~N~l~~ 181 (451)
+.|++++|++++
T Consensus 118 ~~L~l~~N~i~~ 129 (198)
T 1ds9_A 118 RVLYMSNNKITN 129 (198)
T ss_dssp SEEEESEEECCC
T ss_pred CEEECCCCcCCc
Confidence 555555555543
No 378
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.25 E-value=1.2e-11 Score=125.27 Aligned_cols=153 Identities=20% Similarity=0.146 Sum_probs=72.6
Q ss_pred eeccceEEEe---ehhHHHhhhh-cchhhhhhhhhh-------------hhhccCCCcceE--------EEeecCCcccc
Q 013004 30 ICARGFTLLV---TLKAVLQECE-QLHLLISFLIFI-------------RVLQSSSNLFVY--------LISDLGNAALS 84 (451)
Q Consensus 30 ~~~~~~~~~~---~l~~~~~~~~-~l~~~~~~~~~~-------------~~l~~~~n~~~~--------~~~~l~~n~~~ 84 (451)
..|..+..++ .|....+.+. .+|..++.+..+ +.|++++|.++. ..+++++|.++
T Consensus 25 ~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~lp~~~~~L~~L~l~~n~l~ 104 (454)
T 1jl5_A 25 EMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSSLPELPPHLESLVASCNSLT 104 (454)
T ss_dssp ---------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSCCCSCCTTCSEEECCSSCCS
T ss_pred hCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCccccCCCCcCCCCEEEccCCcCC
Confidence 3444444444 4455555544 667777666654 667777776543 34567777777
Q ss_pred ccCCccccCCCCCCEEeCcCCccCccCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeeccccccCCCChhhhh
Q 013004 85 GELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLT 164 (451)
Q Consensus 85 g~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~ 164 (451)
+ +|+.+ ++|+.|++++|++++ +|.. .++|+.|++++|++++ +| +++++++|++|++++|++++ +|..
T Consensus 105 ~-lp~~~---~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~-- 171 (454)
T 1jl5_A 105 E-LPELP---QSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDL-- 171 (454)
T ss_dssp S-CCCCC---TTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCC--
T ss_pred c-ccccc---CCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCC--
Confidence 6 66432 445555555555542 2211 1345555555555553 44 35555555555555555543 3322
Q ss_pred cCCCCCeeccCCccccCcCCCCCCCCccccccc
Q 013004 165 TITSLNILDLSNNRLSGPVPDNGSFSQFTPISF 197 (451)
Q Consensus 165 ~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~ 197 (451)
..+|+.|++++|.+++ +|..+.+..+....+
T Consensus 172 -~~~L~~L~L~~n~l~~-l~~~~~l~~L~~L~l 202 (454)
T 1jl5_A 172 -PPSLEFIAAGNNQLEE-LPELQNLPFLTAIYA 202 (454)
T ss_dssp -CTTCCEEECCSSCCSS-CCCCTTCTTCCEEEC
T ss_pred -cccccEEECcCCcCCc-CccccCCCCCCEEEC
Confidence 1244555555555444 333333333333333
No 379
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.25 E-value=9.3e-12 Score=126.19 Aligned_cols=129 Identities=26% Similarity=0.307 Sum_probs=84.1
Q ss_pred hhhhhhccCCCcceE--------EEeecCCccccccCCccccCCCCCCEEeCcCCccCccCCccccCCCCCcEEeCCCCc
Q 013004 59 IFIRVLQSSSNLFVY--------LISDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNL 130 (451)
Q Consensus 59 ~~~~~l~~~~n~~~~--------~~~~l~~n~~~g~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~ 130 (451)
..++.|++++|.+.. ..+++++|.+++ +| +++.+++|++|++++|++++ +|..+ .+|+.|++++|+
T Consensus 111 ~~L~~L~l~~n~l~~l~~~~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~ 184 (454)
T 1jl5_A 111 QSLKSLLVDNNNLKALSDLPPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQ 184 (454)
T ss_dssp TTCCEEECCSSCCSCCCSCCTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSC
T ss_pred CCCcEEECCCCccCcccCCCCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCc
Confidence 566777777765543 345677777775 66 57778888888888887774 56543 477777777777
Q ss_pred CCccCcccccCCcccceeeccccccCCCChhhhhcCCCCCeeccCCccccCcCCCCCCCCcccccccccc
Q 013004 131 FNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPDNGSFSQFTPISFENN 200 (451)
Q Consensus 131 l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n 200 (451)
+++ +| .++++++|+.|++++|++++ +|.. .++|+.|++++|.++ .+|..+.+..++...+.+|
T Consensus 185 l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~n~l~-~lp~~~~l~~L~~L~l~~N 247 (454)
T 1jl5_A 185 LEE-LP-ELQNLPFLTAIYADNNSLKK-LPDL---PLSLESIVAGNNILE-ELPELQNLPFLTTIYADNN 247 (454)
T ss_dssp CSS-CC-CCTTCTTCCEEECCSSCCSS-CCCC---CTTCCEEECCSSCCS-SCCCCTTCTTCCEEECCSS
T ss_pred CCc-Cc-cccCCCCCCEEECCCCcCCc-CCCC---cCcccEEECcCCcCC-cccccCCCCCCCEEECCCC
Confidence 774 55 47777777777777777765 3432 235666777777666 4555555555555555554
No 380
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.24 E-value=1.1e-13 Score=124.23 Aligned_cols=106 Identities=21% Similarity=0.247 Sum_probs=91.0
Q ss_pred EeecCCccccccCCccccCCCCCCEEeCcCCccCccCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeeccccc
Q 013004 75 ISDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNS 154 (451)
Q Consensus 75 ~~~l~~n~~~g~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~ 154 (451)
.++|++|.+++ +| .++.+++|+.|++++|.++ .+|..+..+++|+.|++++|++++ +| .++.+++|+.|++++|+
T Consensus 52 ~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~ 126 (198)
T 1ds9_A 52 HLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNK 126 (198)
T ss_dssp EEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEE
T ss_pred EEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCc
Confidence 34555555655 67 8899999999999999999 788888888999999999999985 56 68999999999999999
Q ss_pred cCCCCh-hhhhcCCCCCeeccCCccccCcCCC
Q 013004 155 LSGLIP-TSLTTITSLNILDLSNNRLSGPVPD 185 (451)
Q Consensus 155 l~~~~p-~~~~~l~~L~~l~ls~N~l~~~~p~ 185 (451)
+++..+ ..+..+++|+.|++++|++++.+|.
T Consensus 127 i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~ 158 (198)
T 1ds9_A 127 ITNWGEIDKLAALDKLEDLLLAGNPLYNDYKE 158 (198)
T ss_dssp CCCHHHHHHHTTTTTCSEEEECSCHHHHHHHT
T ss_pred CCchhHHHHHhcCCCCCEEEecCCcccccccc
Confidence 986432 4789999999999999999988775
No 381
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.23 E-value=2.2e-11 Score=113.86 Aligned_cols=141 Identities=12% Similarity=0.044 Sum_probs=106.7
Q ss_pred HHhcCCCCCCccCccCCceEEEEEeCCCCEEEEEEcccccccccHHHHHHHHHHHhcCC-CCCccceeeEEecCCeeeEE
Q 013004 296 VATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAV-HRNLLRLYGFCTTVTEKLLV 374 (451)
Q Consensus 296 ~~~~~f~~~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lv 374 (451)
...++|......+.|+.+.||++... ++.+++|+...... .....+.+|+.++..+. +..+.++++++...+..|+|
T Consensus 11 ~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~-~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv 88 (263)
T 3tm0_A 11 KLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYK-GTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLL 88 (263)
T ss_dssp HHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGT-TSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEE
T ss_pred HHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccC-CCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEE
Confidence 34456776777888888999999864 67899999864321 12235889999998774 67788999999888889999
Q ss_pred EecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcC-----------------------------------
Q 013004 375 YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEH----------------------------------- 419 (451)
Q Consensus 375 ~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~----------------------------------- 419 (451)
|||++|.++.+.+.. ......++.++++++..||+.
T Consensus 89 ~e~i~G~~l~~~~~~---------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (263)
T 3tm0_A 89 MSEADGVLCSEEYED---------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWE 159 (263)
T ss_dssp EECCSSEEHHHHCCT---------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGS
T ss_pred EEecCCeehhhccCC---------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccccc
Confidence 999999998766321 112346788899999999981
Q ss_pred ---------------------CCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 420 ---------------------CDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 420 ---------------------~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
..+.++|+|++|.||+++++....|.||
T Consensus 160 ~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDw 208 (263)
T 3tm0_A 160 EDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDL 208 (263)
T ss_dssp TTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCC
T ss_pred ccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEc
Confidence 0145899999999999987655567776
No 382
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.16 E-value=1.5e-11 Score=129.14 Aligned_cols=81 Identities=28% Similarity=0.339 Sum_probs=48.1
Q ss_pred CCCCEEeCcCCccCccCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeeccccccCCCChhhhhcCCCCCeecc
Q 013004 95 KNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDL 174 (451)
Q Consensus 95 ~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~l 174 (451)
++|+.|++++|++++ +| ..+++|+.|+|++|+++ .+|. .+++|+.|+|++|+++ .+|..+..+++|+.|++
T Consensus 221 ~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L 291 (622)
T 3g06_A 221 SGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNL 291 (622)
T ss_dssp TTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEEC
T ss_pred CCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEe
Confidence 455555666665553 44 33455666666666665 4554 3456666666666666 45666666666666666
Q ss_pred CCccccCcCC
Q 013004 175 SNNRLSGPVP 184 (451)
Q Consensus 175 s~N~l~~~~p 184 (451)
++|++++.+|
T Consensus 292 ~~N~l~~~~~ 301 (622)
T 3g06_A 292 EGNPLSERTL 301 (622)
T ss_dssp CSCCCCHHHH
T ss_pred cCCCCCCcCH
Confidence 6666666544
No 383
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.15 E-value=4.9e-12 Score=125.38 Aligned_cols=126 Identities=22% Similarity=0.294 Sum_probs=104.8
Q ss_pred hhhhhhccCCCcce----------------EEEeecCCcccc--c---cCCccccCCCCCCEEeCcCCccC----ccCCc
Q 013004 59 IFIRVLQSSSNLFV----------------YLISDLGNAALS--G---ELAPELGQLKNLELLELYGNNLS----GHIPS 113 (451)
Q Consensus 59 ~~~~~l~~~~n~~~----------------~~~~~l~~n~~~--g---~~p~~l~~l~~L~~L~ls~N~l~----~~~p~ 113 (451)
+.|+.|++++|.+. +..++|++|.++ | .+|..+..+++|+.|+|++|.++ +.+|.
T Consensus 159 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~ 238 (386)
T 2ca6_A 159 PPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAI 238 (386)
T ss_dssp CCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHH
T ss_pred CCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHH
Confidence 67778888877663 345678888876 2 23448889999999999999996 67899
Q ss_pred cccCCCCCcEEeCCCCcCCcc----Ccccc--cCCcccceeeccccccCC----CChhhh-hcCCCCCeeccCCccccCc
Q 013004 114 ALGNLIKLKSLDLYSNLFNGT----IPDTL--ANLKQLKYLRLNNNSLSG----LIPTSL-TTITSLNILDLSNNRLSGP 182 (451)
Q Consensus 114 ~~~~l~~L~~L~ls~N~l~g~----~p~~~--~~l~~L~~L~ls~N~l~~----~~p~~~-~~l~~L~~l~ls~N~l~~~ 182 (451)
.+..+++|+.|+|++|.+++. +|..+ +.+++|+.|+|++|.+++ .+|..+ .++++|+.|++++|++++.
T Consensus 239 ~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~ 318 (386)
T 2ca6_A 239 ALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEE 318 (386)
T ss_dssp HGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTT
T ss_pred HHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcc
Confidence 999999999999999999876 56777 448999999999999997 488877 6789999999999999875
Q ss_pred CC
Q 013004 183 VP 184 (451)
Q Consensus 183 ~p 184 (451)
.|
T Consensus 319 ~~ 320 (386)
T 2ca6_A 319 DD 320 (386)
T ss_dssp SH
T ss_pred hh
Confidence 53
No 384
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.15 E-value=2.3e-12 Score=125.02 Aligned_cols=127 Identities=21% Similarity=0.229 Sum_probs=90.0
Q ss_pred EeecCCccccccCCccccCCCCCCEEeCcCC-ccCc-cCCccccCCCCCcEEeCCCC-cCCcc-CcccccCCc-ccceee
Q 013004 75 ISDLGNAALSGELAPELGQLKNLELLELYGN-NLSG-HIPSALGNLIKLKSLDLYSN-LFNGT-IPDTLANLK-QLKYLR 149 (451)
Q Consensus 75 ~~~l~~n~~~g~~p~~l~~l~~L~~L~ls~N-~l~~-~~p~~~~~l~~L~~L~ls~N-~l~g~-~p~~~~~l~-~L~~L~ 149 (451)
.++|++|.+++..|..++.+++|+.|++++| .+++ .+|..+..+++|+.|++++| .+++. +|..+..++ +|++|+
T Consensus 122 ~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~ 201 (336)
T 2ast_B 122 NLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLN 201 (336)
T ss_dssp EEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEE
T ss_pred EEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEE
Confidence 4566677777777777888888888888888 6765 36666778888888888888 77754 566677788 888888
Q ss_pred cccc--ccC-CCChhhhhcCCCCCeeccCCcc-ccCcCC-CCCCCCccccccccccc
Q 013004 150 LNNN--SLS-GLIPTSLTTITSLNILDLSNNR-LSGPVP-DNGSFSQFTPISFENNL 201 (451)
Q Consensus 150 ls~N--~l~-~~~p~~~~~l~~L~~l~ls~N~-l~~~~p-~~~~~~~~~~~~~~~n~ 201 (451)
+++| .++ +.+|..+..+++|+.|++++|. +++..+ ....+.+++.+.+.+|.
T Consensus 202 l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~ 258 (336)
T 2ast_B 202 LSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCY 258 (336)
T ss_dssp CCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCT
T ss_pred eCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCC
Confidence 8888 444 3467777788888888888887 554333 33344555555555553
No 385
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.14 E-value=2.8e-11 Score=118.31 Aligned_cols=158 Identities=19% Similarity=0.116 Sum_probs=108.4
Q ss_pred EEeehhHHHhhhhcchh-hhhhhhhhhhhccCCCcceEE--------------EeecCCccccccCCccccCCCCCCEEe
Q 013004 37 LLVTLKAVLQECEQLHL-LISFLIFIRVLQSSSNLFVYL--------------ISDLGNAALSGELAPELGQLKNLELLE 101 (451)
Q Consensus 37 ~~~~l~~~~~~~~~l~~-~~~~~~~~~~l~~~~n~~~~~--------------~~~l~~n~~~g~~p~~l~~l~~L~~L~ 101 (451)
.++.|....+.++.+|. .+..++.|+.|++++|.+... ...++.|.++...|..+..+++|+.|+
T Consensus 31 ~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~ 110 (350)
T 4ay9_X 31 NAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLL 110 (350)
T ss_dssp TCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEE
T ss_pred CCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhcccccccc
Confidence 45556666678888886 478899999999999976322 234556778776677789999999999
Q ss_pred CcCCccCccCCccccC-------------------------C-CCCcEEeCCCCcCCccCcccccCCcccceeeccc-cc
Q 013004 102 LYGNNLSGHIPSALGN-------------------------L-IKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNN-NS 154 (451)
Q Consensus 102 ls~N~l~~~~p~~~~~-------------------------l-~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~-N~ 154 (451)
+++|++++..+..+.. + ..++.|+|++|+++ .+|.......+|+.|++++ |.
T Consensus 111 l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~-~i~~~~f~~~~L~~l~l~~~n~ 189 (350)
T 4ay9_X 111 ISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ-EIHNSAFNGTQLDELNLSDNNN 189 (350)
T ss_dssp EEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCC-EECTTSSTTEEEEEEECTTCTT
T ss_pred ccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhcccccccc-CCChhhccccchhHHhhccCCc
Confidence 9999988543332222 2 24667778888877 5665555667788888874 55
Q ss_pred cCCCChhhhhcCCCCCeeccCCccccCcCCCCCCCCccccccc
Q 013004 155 LSGLIPTSLTTITSLNILDLSNNRLSGPVPDNGSFSQFTPISF 197 (451)
Q Consensus 155 l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~ 197 (451)
++...+..|..+++|+.||+++|+|+..++. .+..+..+..
T Consensus 190 l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~--~~~~L~~L~~ 230 (350)
T 4ay9_X 190 LEELPNDVFHGASGPVILDISRTRIHSLPSY--GLENLKKLRA 230 (350)
T ss_dssp CCCCCTTTTTTEECCSEEECTTSCCCCCCSS--SCTTCCEEEC
T ss_pred ccCCCHHHhccCcccchhhcCCCCcCccChh--hhccchHhhh
Confidence 5543335678888888888888888754432 2445544443
No 386
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.13 E-value=2e-12 Score=125.45 Aligned_cols=143 Identities=18% Similarity=0.229 Sum_probs=114.6
Q ss_pred hhhhhhccCCCcce-----------EEEeecCCcccccc-CCccccCCCCCCEEeCcCCccCccCCccccCCCCCcEEeC
Q 013004 59 IFIRVLQSSSNLFV-----------YLISDLGNAALSGE-LAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDL 126 (451)
Q Consensus 59 ~~~~~l~~~~n~~~-----------~~~~~l~~n~~~g~-~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l 126 (451)
..++.+++++|.+. +..++|++|.+++. +|..+..+++|+.|++++|.+++..|..++.+++|+.|++
T Consensus 70 ~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L 149 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNL 149 (336)
T ss_dssp TTCSEEECTTCEECSCCCSCCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEEC
T ss_pred ccceEEEcCCccccccchhhccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEEC
Confidence 56777777777633 45678889998876 8888999999999999999999889999999999999999
Q ss_pred CCC-cCCcc-CcccccCCcccceeecccc-ccCCC-ChhhhhcCC-CCCeeccCCc--ccc-CcCCC-CCCCCccccccc
Q 013004 127 YSN-LFNGT-IPDTLANLKQLKYLRLNNN-SLSGL-IPTSLTTIT-SLNILDLSNN--RLS-GPVPD-NGSFSQFTPISF 197 (451)
Q Consensus 127 s~N-~l~g~-~p~~~~~l~~L~~L~ls~N-~l~~~-~p~~~~~l~-~L~~l~ls~N--~l~-~~~p~-~~~~~~~~~~~~ 197 (451)
++| .+++. +|..+.++++|++|++++| .+++. +|..+..++ +|+.|++++| .++ +.+|. ...+.++..+.+
T Consensus 150 ~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l 229 (336)
T 2ast_B 150 SGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDL 229 (336)
T ss_dssp TTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEEC
T ss_pred CCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeC
Confidence 999 68763 7777889999999999999 99864 678889999 9999999999 455 33332 123455666666
Q ss_pred cccc
Q 013004 198 ENNL 201 (451)
Q Consensus 198 ~~n~ 201 (451)
.+|.
T Consensus 230 ~~~~ 233 (336)
T 2ast_B 230 SDSV 233 (336)
T ss_dssp TTCT
T ss_pred CCCC
Confidence 6654
No 387
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.13 E-value=3.8e-11 Score=125.98 Aligned_cols=75 Identities=25% Similarity=0.269 Sum_probs=36.7
Q ss_pred CCCcEEeCCCCcCCccCcccccCCcccceeeccccccCCCChhhhhcCCCCCeeccCCccccCcCCCCCCCCcccccccc
Q 013004 119 IKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPDNGSFSQFTPISFE 198 (451)
Q Consensus 119 ~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~ 198 (451)
++|+.|+|++|++++ +| ..+++|+.|+|++|++++ +|. .+++|+.|++++|+++..++....+.++..+.+.
T Consensus 221 ~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~~-lp~---~~~~L~~L~Ls~N~L~~lp~~l~~l~~L~~L~L~ 292 (622)
T 3g06_A 221 SGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLTS-LPM---LPSGLLSLSVYRNQLTRLPESLIHLSSETTVNLE 292 (622)
T ss_dssp TTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCCSCCGGGGGSCTTCEEECC
T ss_pred CCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCCc-CCc---ccccCcEEeCCCCCCCcCCHHHhhccccCEEEec
Confidence 344555555555542 34 233455556666665553 343 3455666666666666322222334444445555
Q ss_pred ccc
Q 013004 199 NNL 201 (451)
Q Consensus 199 ~n~ 201 (451)
+|.
T Consensus 293 ~N~ 295 (622)
T 3g06_A 293 GNP 295 (622)
T ss_dssp SCC
T ss_pred CCC
Confidence 553
No 388
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.06 E-value=1.5e-10 Score=107.58 Aligned_cols=124 Identities=14% Similarity=0.048 Sum_probs=90.7
Q ss_pred CccCCceEEEEEeCCCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCC--ccceeeEEecCCeeeEEEecCCCCChhH
Q 013004 308 GRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRN--LLRLYGFCTTVTEKLLVYPYMTNGSVAS 385 (451)
Q Consensus 308 G~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~n--iv~l~~~~~~~~~~~lv~ey~~~gsL~~ 385 (451)
+.|..+.||++...+|+.+++|..... ....+.+|+.++..+.+.+ +.+++++....+..++||||++|.++.
T Consensus 29 ~gg~~~~v~~~~~~~g~~~vlK~~~~~----~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~- 103 (264)
T 1nd4_A 29 IGCSDAAVFRLSAQGRPVLFVKTDLSG----ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL- 103 (264)
T ss_dssp CTTSSCEEEEEECTTSCCEEEEEECSC----TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT-
T ss_pred cCCCCceEEEEecCCCCeEEEEeCCcc----cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC-
Confidence 355669999998777888999987543 1235788888888776544 456888888777889999999998873
Q ss_pred HhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCC---------------------------------------------
Q 013004 386 RLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHC--------------------------------------------- 420 (451)
Q Consensus 386 ~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~--------------------------------------------- 420 (451)
... .+ ...++.++++.|..||+..
T Consensus 104 -~~~-------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (264)
T 1nd4_A 104 -SSH-------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFA 172 (264)
T ss_dssp -TSC-------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHH
T ss_pred -cCc-------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHH
Confidence 211 11 2356777788888888641
Q ss_pred ----------CCCeeecCCCCCceeeCCCCCccchhh
Q 013004 421 ----------DPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 421 ----------~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
.+.++|+|++|.||+++++....+.||
T Consensus 173 ~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~ 209 (264)
T 1nd4_A 173 RLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDC 209 (264)
T ss_dssp HHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCC
T ss_pred HHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcc
Confidence 113999999999999987765668886
No 389
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=99.01 E-value=7.9e-10 Score=108.33 Aligned_cols=137 Identities=11% Similarity=0.184 Sum_probs=98.9
Q ss_pred CCccCccCCceEEEEEeCCCCEEEEEEcc--cccccccHHHHHHHHHHHhcCC--CCCccceeeEEecC---CeeeEEEe
Q 013004 304 KNILGRGGFGKVYKGRLADGKLVAVKRLK--EERTSGGELQFQTEVKIISMAV--HRNLLRLYGFCTTV---TEKLLVYP 376 (451)
Q Consensus 304 ~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~--~~~~~~~~~~~~~E~~~l~~l~--H~niv~l~~~~~~~---~~~~lv~e 376 (451)
.+.++.|.++.||+....+ ..+++|+.. ..........+.+|..++..+. +..+.+++.++.+. +..|+|||
T Consensus 43 ~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme 121 (359)
T 3dxp_A 43 VEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIME 121 (359)
T ss_dssp EEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEE
T ss_pred EEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEE
Confidence 4668899999999998754 678888775 3321122336788999998887 45678888888765 34799999
Q ss_pred cCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCC------------------------------------
Q 013004 377 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHC------------------------------------ 420 (451)
Q Consensus 377 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~------------------------------------ 420 (451)
|++|..+.+.. ...++..++..++.++++.|..||+..
T Consensus 122 ~v~G~~l~~~~------~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (359)
T 3dxp_A 122 FVSGRVLWDQS------LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIP 195 (359)
T ss_dssp CCCCBCCCCTT------CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCH
T ss_pred ecCCeecCCCc------cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCCh
Confidence 99998774321 123677888889999999999999731
Q ss_pred -------------------CCCeeecCCCCCceeeCCCCC--ccchhh
Q 013004 421 -------------------DPKIIHRDVKAANILLDEDAD--QSSKTI 447 (451)
Q Consensus 421 -------------------~~~iiHrDlK~~NILld~~~~--~~i~df 447 (451)
.+.++|+|+++.|||++.++. ..+.||
T Consensus 196 ~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDw 243 (359)
T 3dxp_A 196 AMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDW 243 (359)
T ss_dssp HHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCC
T ss_pred HHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECc
Confidence 246999999999999998754 466665
No 390
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.00 E-value=9.4e-11 Score=115.13 Aligned_cols=107 Identities=22% Similarity=0.245 Sum_probs=73.4
Q ss_pred EeecCCccccccCC----ccccCCC-CCCEEeCcCCccCccCCccccCC-----CCCcEEeCCCCcCCccCcccccC---
Q 013004 75 ISDLGNAALSGELA----PELGQLK-NLELLELYGNNLSGHIPSALGNL-----IKLKSLDLYSNLFNGTIPDTLAN--- 141 (451)
Q Consensus 75 ~~~l~~n~~~g~~p----~~l~~l~-~L~~L~ls~N~l~~~~p~~~~~l-----~~L~~L~ls~N~l~g~~p~~~~~--- 141 (451)
.++|++|.+++..+ ..+..++ +|+.|+|++|.+++..+..+..+ ++|+.|+|++|.+++..+..++.
T Consensus 26 ~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~ 105 (362)
T 3goz_A 26 SLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVKTLA 105 (362)
T ss_dssp EEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHH
T ss_pred EEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHHHHH
Confidence 34555555555444 5566677 78888888888877666666664 77888888888887666654443
Q ss_pred -C-cccceeeccccccCCCChhhhhc-----CCCCCeeccCCccccC
Q 013004 142 -L-KQLKYLRLNNNSLSGLIPTSLTT-----ITSLNILDLSNNRLSG 181 (451)
Q Consensus 142 -l-~~L~~L~ls~N~l~~~~p~~~~~-----l~~L~~l~ls~N~l~~ 181 (451)
+ ++|+.|+|++|++++..+..+.. .++|+.|++++|.+++
T Consensus 106 ~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~ 152 (362)
T 3goz_A 106 AIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGI 152 (362)
T ss_dssp TSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGG
T ss_pred hCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCH
Confidence 3 67888888888887766655443 3578888888887774
No 391
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=98.95 E-value=2.3e-10 Score=112.32 Aligned_cols=111 Identities=26% Similarity=0.260 Sum_probs=70.3
Q ss_pred EEeecCCccccccCCccccCC-----CCCCEEeCcCCccCccCCccccC----C-CCCcEEeCCCCcCCccCcccccC--
Q 013004 74 LISDLGNAALSGELAPELGQL-----KNLELLELYGNNLSGHIPSALGN----L-IKLKSLDLYSNLFNGTIPDTLAN-- 141 (451)
Q Consensus 74 ~~~~l~~n~~~g~~p~~l~~l-----~~L~~L~ls~N~l~~~~p~~~~~----l-~~L~~L~ls~N~l~g~~p~~~~~-- 141 (451)
..++|++|.+++..+..+..+ ++|+.|+|++|.+++..+..+.. + ++|+.|+|++|++++..+..++.
T Consensus 54 ~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l 133 (362)
T 3goz_A 54 TSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAF 133 (362)
T ss_dssp CEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHH
T ss_pred eEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHH
Confidence 345667777776666666554 77777777777777655554333 3 67777777777776555544332
Q ss_pred ---CcccceeeccccccCCCCh----hhhhcCC-CCCeeccCCccccCcCC
Q 013004 142 ---LKQLKYLRLNNNSLSGLIP----TSLTTIT-SLNILDLSNNRLSGPVP 184 (451)
Q Consensus 142 ---l~~L~~L~ls~N~l~~~~p----~~~~~l~-~L~~l~ls~N~l~~~~p 184 (451)
.++|++|+|++|.+++..+ ..+..++ +|+.|++++|.+++..+
T Consensus 134 ~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~ 184 (362)
T 3goz_A 134 SNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKNC 184 (362)
T ss_dssp TTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCH
T ss_pred HhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchhhH
Confidence 2477777777777765333 3344444 67777777777765443
No 392
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=98.92 E-value=1.3e-11 Score=125.08 Aligned_cols=89 Identities=24% Similarity=0.223 Sum_probs=51.6
Q ss_pred CCCCCCEEeCcCCccCcc----CCccccCCCCCcEEeCCCCcCCccCcccccC-----CcccceeeccccccCCC----C
Q 013004 93 QLKNLELLELYGNNLSGH----IPSALGNLIKLKSLDLYSNLFNGTIPDTLAN-----LKQLKYLRLNNNSLSGL----I 159 (451)
Q Consensus 93 ~l~~L~~L~ls~N~l~~~----~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~-----l~~L~~L~ls~N~l~~~----~ 159 (451)
.+++|+.|++++|.+++. +|..+..+++|+.|++++|.+++..+..+.. .++|+.|++++|.+++. +
T Consensus 254 ~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l 333 (461)
T 1z7x_W 254 PSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHF 333 (461)
T ss_dssp TTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHH
T ss_pred CCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHH
Confidence 456666666666666643 4555556666666666666665433333322 24666666666666544 3
Q ss_pred hhhhhcCCCCCeeccCCccccC
Q 013004 160 PTSLTTITSLNILDLSNNRLSG 181 (451)
Q Consensus 160 p~~~~~l~~L~~l~ls~N~l~~ 181 (451)
|..+..+++|+.||+++|.+++
T Consensus 334 ~~~l~~~~~L~~L~Ls~n~i~~ 355 (461)
T 1z7x_W 334 SSVLAQNRFLLELQISNNRLED 355 (461)
T ss_dssp HHHHHHCSSCCEEECCSSBCHH
T ss_pred HHHHhhCCCccEEEccCCcccc
Confidence 4555555666666666666654
No 393
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=98.91 E-value=1.1e-09 Score=106.99 Aligned_cols=86 Identities=23% Similarity=0.291 Sum_probs=43.4
Q ss_pred ccCCCCCCEEeCcCCccCccCCc-cccCCCCCcE-EeCCCCcCCccCcccccCCcccceeeccccccCCCChhhhhcCCC
Q 013004 91 LGQLKNLELLELYGNNLSGHIPS-ALGNLIKLKS-LDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITS 168 (451)
Q Consensus 91 l~~l~~L~~L~ls~N~l~~~~p~-~~~~l~~L~~-L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~ 168 (451)
+.++++|+.|+|++|++.+.+|. .|.+++++.. +++++|+++...|..|..+++|++|++++|++++..+..+....+
T Consensus 50 f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~ 129 (350)
T 4ay9_X 50 FSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQ 129 (350)
T ss_dssp STTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSS
T ss_pred HcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccch
Confidence 45555555555555555444433 3455555443 344455555444555555555555555555555443334444444
Q ss_pred CCeeccCC
Q 013004 169 LNILDLSN 176 (451)
Q Consensus 169 L~~l~ls~ 176 (451)
+..+++++
T Consensus 130 l~~l~l~~ 137 (350)
T 4ay9_X 130 KVLLDIQD 137 (350)
T ss_dssp CEEEEEES
T ss_pred hhhhhhcc
Confidence 45555543
No 394
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=98.84 E-value=3.7e-10 Score=114.21 Aligned_cols=132 Identities=21% Similarity=0.184 Sum_probs=77.5
Q ss_pred cchhhhhhhhhhhhhccCCCcce-----------------EEEeecCCccccc----cCCccccCCCCCCEEeCcCCccC
Q 013004 50 QLHLLISFLIFIRVLQSSSNLFV-----------------YLISDLGNAALSG----ELAPELGQLKNLELLELYGNNLS 108 (451)
Q Consensus 50 ~l~~~~~~~~~~~~l~~~~n~~~-----------------~~~~~l~~n~~~g----~~p~~l~~l~~L~~L~ls~N~l~ 108 (451)
.++..+..++.++.|++++|.+. +..++|++|.++. .+|..+..+++|+.|++++|.++
T Consensus 47 ~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~ 126 (461)
T 1z7x_W 47 DISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLG 126 (461)
T ss_dssp HHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCH
T ss_pred HHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhhCCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCc
Confidence 44555555667777777776531 3455666666662 45666677777777777777766
Q ss_pred ccCCcccc-----CCCCCcEEeCCCCcCCcc----CcccccCCcccceeeccccccCCCChhhhhc-----CCCCCeecc
Q 013004 109 GHIPSALG-----NLIKLKSLDLYSNLFNGT----IPDTLANLKQLKYLRLNNNSLSGLIPTSLTT-----ITSLNILDL 174 (451)
Q Consensus 109 ~~~p~~~~-----~l~~L~~L~ls~N~l~g~----~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~-----l~~L~~l~l 174 (451)
+..+..+. ..++|+.|++++|++++. ++..+..+++|+.|++++|.++...+..+.. .++|+.|++
T Consensus 127 ~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L 206 (461)
T 1z7x_W 127 DAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKL 206 (461)
T ss_dssp HHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEEC
T ss_pred hHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEc
Confidence 43333222 234567777777766643 2444555666666666666665433333332 446666666
Q ss_pred CCccccC
Q 013004 175 SNNRLSG 181 (451)
Q Consensus 175 s~N~l~~ 181 (451)
++|.+++
T Consensus 207 ~~n~l~~ 213 (461)
T 1z7x_W 207 ESCGVTS 213 (461)
T ss_dssp TTSCCBT
T ss_pred cCCCCcH
Confidence 6666654
No 395
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.74 E-value=1.7e-09 Score=106.51 Aligned_cols=109 Identities=18% Similarity=0.146 Sum_probs=57.0
Q ss_pred EEEeecCCccccccCCcccc-CCCCCCEEeCcCCccCccCCccc-----cCCCCCcEEeCCCCcCCc----cCcccccCC
Q 013004 73 YLISDLGNAALSGELAPELG-QLKNLELLELYGNNLSGHIPSAL-----GNLIKLKSLDLYSNLFNG----TIPDTLANL 142 (451)
Q Consensus 73 ~~~~~l~~n~~~g~~p~~l~-~l~~L~~L~ls~N~l~~~~p~~~-----~~l~~L~~L~ls~N~l~g----~~p~~~~~l 142 (451)
+..++|++|.++..-...+. .+.+|+.|+|++|+++......+ ...++|+.|+|++|.++. .++..+..+
T Consensus 103 L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~ 182 (372)
T 3un9_A 103 LDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAGN 182 (372)
T ss_dssp EEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHHTC
T ss_pred ceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHhcC
Confidence 44556666665433222222 24456666666666654322222 234556666666666642 133334555
Q ss_pred cccceeeccccccCCC----ChhhhhcCCCCCeeccCCccccC
Q 013004 143 KQLKYLRLNNNSLSGL----IPTSLTTITSLNILDLSNNRLSG 181 (451)
Q Consensus 143 ~~L~~L~ls~N~l~~~----~p~~~~~l~~L~~l~ls~N~l~~ 181 (451)
++|++|+|++|.++.. ++..+...++|+.||+++|.++.
T Consensus 183 ~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~ 225 (372)
T 3un9_A 183 TSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGD 225 (372)
T ss_dssp SSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCH
T ss_pred CCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCH
Confidence 6666666666666432 23444555566666666666653
No 396
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.65 E-value=8.3e-09 Score=96.23 Aligned_cols=80 Identities=28% Similarity=0.306 Sum_probs=51.4
Q ss_pred cCCCCCCEEeCcCCccCc--cCCccccCCCCCcEEeCCCCcCCccCcccccCCc--ccceeeccccccCCCCh-------
Q 013004 92 GQLKNLELLELYGNNLSG--HIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLK--QLKYLRLNNNSLSGLIP------- 160 (451)
Q Consensus 92 ~~l~~L~~L~ls~N~l~~--~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~--~L~~L~ls~N~l~~~~p------- 160 (451)
.++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|++++. ..+..+. +|+.|+|++|.+.+.+|
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~ 244 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYIS 244 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHH
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHH
Confidence 346677777777777776 4455566677777777777777643 2344444 67777777777766554
Q ss_pred hhhhcCCCCCeec
Q 013004 161 TSLTTITSLNILD 173 (451)
Q Consensus 161 ~~~~~l~~L~~l~ 173 (451)
..+..+++|+.||
T Consensus 245 ~il~~~P~L~~LD 257 (267)
T 3rw6_A 245 AIRERFPKLLRLD 257 (267)
T ss_dssp HHHHHCTTCCEES
T ss_pred HHHHHCcccCeEC
Confidence 2356667776665
No 397
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.56 E-value=7.1e-09 Score=102.06 Aligned_cols=123 Identities=20% Similarity=0.177 Sum_probs=77.1
Q ss_pred hhhhhhccCCCcce-------------EEEeecCCccccccCCccc-----cCCCCCCEEeCcCCccCc----cCCcccc
Q 013004 59 IFIRVLQSSSNLFV-------------YLISDLGNAALSGELAPEL-----GQLKNLELLELYGNNLSG----HIPSALG 116 (451)
Q Consensus 59 ~~~~~l~~~~n~~~-------------~~~~~l~~n~~~g~~p~~l-----~~l~~L~~L~ls~N~l~~----~~p~~~~ 116 (451)
..++.|++++|.+. +..++|++|.++..-...+ ...++|+.|+|++|.++. .++..+.
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~ 180 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLA 180 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHH
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHh
Confidence 46667777777553 3456777777754333333 235677777777777753 2444456
Q ss_pred CCCCCcEEeCCCCcCCcc----CcccccCCcccceeeccccccCCC----ChhhhhcCCCCCeeccCCccccC
Q 013004 117 NLIKLKSLDLYSNLFNGT----IPDTLANLKQLKYLRLNNNSLSGL----IPTSLTTITSLNILDLSNNRLSG 181 (451)
Q Consensus 117 ~l~~L~~L~ls~N~l~g~----~p~~~~~l~~L~~L~ls~N~l~~~----~p~~~~~l~~L~~l~ls~N~l~~ 181 (451)
.+++|+.|+|++|.+++. ++..+...++|+.|+|++|.++.. ++..+...++|+.||+++|.++.
T Consensus 181 ~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~ 253 (372)
T 3un9_A 181 GNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSS 253 (372)
T ss_dssp TCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCH
T ss_pred cCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCH
Confidence 677777777777777532 244556666777777777777642 33444556677777777777654
No 398
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.46 E-value=1.3e-08 Score=94.82 Aligned_cols=84 Identities=26% Similarity=0.293 Sum_probs=65.6
Q ss_pred EeCcCCccC---ccCCccccCCCCCcEEeCCCCcCCc--cCcccccCCcccceeeccccccCCCChhhhhcCC--CCCee
Q 013004 100 LELYGNNLS---GHIPSALGNLIKLKSLDLYSNLFNG--TIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTIT--SLNIL 172 (451)
Q Consensus 100 L~ls~N~l~---~~~p~~~~~l~~L~~L~ls~N~l~g--~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~--~L~~l 172 (451)
++++.|+.. +.++....++++|+.|+|++|+|++ .+|..++.+++|+.|+|++|++++. ..+..+. +|+.|
T Consensus 148 l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L 225 (267)
T 3rw6_A 148 IDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEEL 225 (267)
T ss_dssp CCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEE
T ss_pred ccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceE
Confidence 667777433 2223233568899999999999997 5567788999999999999999975 3455555 89999
Q ss_pred ccCCccccCcCCC
Q 013004 173 DLSNNRLSGPVPD 185 (451)
Q Consensus 173 ~ls~N~l~~~~p~ 185 (451)
++++|++++.+|+
T Consensus 226 ~L~~Npl~~~~~~ 238 (267)
T 3rw6_A 226 WLDGNSLCDTFRD 238 (267)
T ss_dssp ECTTSTTGGGCSS
T ss_pred EccCCcCccccCc
Confidence 9999999987764
No 399
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.39 E-value=8.3e-07 Score=85.30 Aligned_cols=131 Identities=14% Similarity=0.184 Sum_probs=90.4
Q ss_pred CCCCCCccCccCCceEEEEEeCCCCEEEEEEcccccccccHHHHHHHHHHHhcCCC----CCccceeeEEecCCeeeEEE
Q 013004 300 GFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVH----RNLLRLYGFCTTVTEKLLVY 375 (451)
Q Consensus 300 ~f~~~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H----~niv~l~~~~~~~~~~~lv~ 375 (451)
.....+.++.|....||+. ++.+++|+..... ....+.+|.+++..+.+ ..+.+++++ +..++||
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~~---~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvm 106 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKRDS---VRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIM 106 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESSHH---HHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCcHH---HHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEE
Confidence 4555678999999999987 5668888763321 12357889988877765 223444444 5678999
Q ss_pred ecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCC-----------------------------------
Q 013004 376 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHC----------------------------------- 420 (451)
Q Consensus 376 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~----------------------------------- 420 (451)
||++|.++...... .++..+...++.+++..+..||+..
T Consensus 107 e~i~G~~l~~~~~~------~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (320)
T 3r70_A 107 KYIKGERITYEQYH------KLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQL 180 (320)
T ss_dssp ECCCCBCCCHHHHT------TSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTC
T ss_pred eecCCccccccccc------cCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhccc
Confidence 99999888643321 1455566667777777777777431
Q ss_pred -------------------------CCCeeecCCCCCceeeCCCCCccchhh
Q 013004 421 -------------------------DPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 421 -------------------------~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
.+.++|+|++|.||+++++....+.||
T Consensus 181 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~ 232 (320)
T 3r70_A 181 LTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDF 232 (320)
T ss_dssp CCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCC
T ss_pred ccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECC
Confidence 234599999999999998655677776
No 400
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.37 E-value=1.6e-06 Score=81.98 Aligned_cols=76 Identities=17% Similarity=0.208 Sum_probs=59.0
Q ss_pred CCCccCccCCceEEEEEeCCCCEEEEEEcccccccccHHHHHHHHHHHhcCCCC---CccceeeEEecCCeeeEEEecCC
Q 013004 303 NKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHR---NLLRLYGFCTTVTEKLLVYPYMT 379 (451)
Q Consensus 303 ~~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~---niv~l~~~~~~~~~~~lv~ey~~ 379 (451)
..+.++.|.++.||++...+|+.++||+..... ......|.+|++.+..+.+. .+.+++++. ..++||||++
T Consensus 19 ~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~-~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~ 93 (288)
T 3d1u_A 19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDA-PALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVD 93 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEECCTTC-CCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCC
T ss_pred ceeeeCCcchhheEEEEeCCCCeEEEEecCCCC-cchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEecc
Confidence 346789999999999998889999999864322 22234689999999998865 467777653 3689999999
Q ss_pred CCCh
Q 013004 380 NGSV 383 (451)
Q Consensus 380 ~gsL 383 (451)
++++
T Consensus 94 g~~~ 97 (288)
T 3d1u_A 94 ERPP 97 (288)
T ss_dssp CCCC
T ss_pred cCCC
Confidence 9874
No 401
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.32 E-value=6.6e-07 Score=85.24 Aligned_cols=131 Identities=20% Similarity=0.159 Sum_probs=88.2
Q ss_pred CCccCccCCceEEEEEeCCCCEEEEEEcccccccccHHHHHHHHHHHhcCC-CCC--ccceeeEEecCC---eeeEEEec
Q 013004 304 KNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAV-HRN--LLRLYGFCTTVT---EKLLVYPY 377 (451)
Q Consensus 304 ~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~-H~n--iv~l~~~~~~~~---~~~lv~ey 377 (451)
.+.++.|.+..||+.. ..+++|+.... .....+.+|.+++..+. +.. +.+.+....... ..|+||||
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~---~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~ 97 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS---RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTK 97 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH---HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEEC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc---chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcc
Confidence 4568899999999753 45788875432 22346889999987763 333 334444433322 34899999
Q ss_pred CCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcC--------------------------------------
Q 013004 378 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEH-------------------------------------- 419 (451)
Q Consensus 378 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~-------------------------------------- 419 (451)
++|.++...... .++..++..++.+++..+..||+.
T Consensus 98 i~G~~l~~~~~~------~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (304)
T 3sg8_A 98 IKGVPLTPLLLN------NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMK 171 (304)
T ss_dssp CCCEECCHHHHH------TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHH
T ss_pred cCCeECCccccc------cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHH
Confidence 999887654322 155666777777777777777751
Q ss_pred -----------------CCCCeeecCCCCCceeeCCC--CCccchhh
Q 013004 420 -----------------CDPKIIHRDVKAANILLDED--ADQSSKTI 447 (451)
Q Consensus 420 -----------------~~~~iiHrDlK~~NILld~~--~~~~i~df 447 (451)
..+.++|+|++|.||+++++ ....+.||
T Consensus 172 ~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~ 218 (304)
T 3sg8_A 172 KVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDF 218 (304)
T ss_dssp HHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCC
T ss_pred HHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeC
Confidence 12458999999999999984 45567776
No 402
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.29 E-value=1e-07 Score=84.16 Aligned_cols=94 Identities=21% Similarity=0.242 Sum_probs=72.2
Q ss_pred CCccccCCCCCCEEeCcCCccCcc----CCccccCCCCCcEEeCCCCcCCcc----CcccccCCcccceeec--cccccC
Q 013004 87 LAPELGQLKNLELLELYGNNLSGH----IPSALGNLIKLKSLDLYSNLFNGT----IPDTLANLKQLKYLRL--NNNSLS 156 (451)
Q Consensus 87 ~p~~l~~l~~L~~L~ls~N~l~~~----~p~~~~~l~~L~~L~ls~N~l~g~----~p~~~~~l~~L~~L~l--s~N~l~ 156 (451)
+...+...++|++|+|++|.++.. +...+...+.|+.|+|++|.+... +...+...++|++|+| ++|.+.
T Consensus 57 l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~ 136 (185)
T 1io0_A 57 CAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLG 136 (185)
T ss_dssp HHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCC
T ss_pred HHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCC
Confidence 345566778999999999998742 445566668899999999998743 4566777788999999 889987
Q ss_pred CC----ChhhhhcCCCCCeeccCCcccc
Q 013004 157 GL----IPTSLTTITSLNILDLSNNRLS 180 (451)
Q Consensus 157 ~~----~p~~~~~l~~L~~l~ls~N~l~ 180 (451)
.. +...+...++|+.|++++|.+.
T Consensus 137 ~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 137 NNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 43 3455666688999999999875
No 403
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.28 E-value=7.2e-07 Score=86.01 Aligned_cols=74 Identities=15% Similarity=0.016 Sum_probs=52.3
Q ss_pred hhhhhhhccCCCcceEE-------E----e-----ecCCccccccCCccccCCCCCCEEeCcCCccCccCCccccCCCCC
Q 013004 58 LIFIRVLQSSSNLFVYL-------I----S-----DLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKL 121 (451)
Q Consensus 58 ~~~~~~l~~~~n~~~~~-------~----~-----~l~~n~~~g~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L 121 (451)
+..|+.|++++|.+... + . .++.+.|.+.+|....+|++|+.|+|++ .++..-+..|.+|++|
T Consensus 48 l~~L~~LdLs~n~i~~~~~~~~~~~~~~~~~~~~~~I~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L 126 (329)
T 3sb4_A 48 FPSLKVLDISNAEIKMYSGKAGTYPNGKFYIYMANFVPAYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAFKGCDNL 126 (329)
T ss_dssp CTTCCEEEEEEEEECCEEESSSSSGGGCCEEECTTEECTTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTTTTCTTC
T ss_pred hccCeEEecCcceeEEecCccccccccccccccccccCHHHhcccccccccccCCCcEEECCc-cccchhHHHhhcCccc
Confidence 56788999999987711 1 1 3344444444444444599999999988 8885556678999999
Q ss_pred cEEeCCCCcCC
Q 013004 122 KSLDLYSNLFN 132 (451)
Q Consensus 122 ~~L~ls~N~l~ 132 (451)
+.|++++|.+.
T Consensus 127 ~~l~l~~n~i~ 137 (329)
T 3sb4_A 127 KICQIRKKTAP 137 (329)
T ss_dssp CEEEBCCSSCC
T ss_pred ceEEcCCCCcc
Confidence 99999999764
No 404
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.14 E-value=6.6e-07 Score=93.18 Aligned_cols=89 Identities=13% Similarity=-0.001 Sum_probs=38.2
Q ss_pred ccCCCCCCEEeCcCCccCccCCccccCCCCCcEEeCCCCcCC---ccCcccccCCcccceeeccccccCCCChhhhhcCC
Q 013004 91 LGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFN---GTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTIT 167 (451)
Q Consensus 91 l~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~---g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~ 167 (451)
+.++++|+.|++++|.+.+ +|..+..+++|+.|+++++... +..+..+..+++|+.|+++++.. +.+|..+..++
T Consensus 216 ~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~-~~l~~~~~~~~ 293 (592)
T 3ogk_B 216 ARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGP-NEMPILFPFAA 293 (592)
T ss_dssp HHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCT-TTGGGGGGGGG
T ss_pred HhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccch-hHHHHHHhhcC
Confidence 3444555555555554442 3334444444444444321111 11122233333444444433322 23455555555
Q ss_pred CCCeeccCCccccC
Q 013004 168 SLNILDLSNNRLSG 181 (451)
Q Consensus 168 ~L~~l~ls~N~l~~ 181 (451)
+|+.|++++|.+++
T Consensus 294 ~L~~L~Ls~~~l~~ 307 (592)
T 3ogk_B 294 QIRKLDLLYALLET 307 (592)
T ss_dssp GCCEEEETTCCCCH
T ss_pred CCcEEecCCCcCCH
Confidence 66666666665543
No 405
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.07 E-value=5.4e-07 Score=88.04 Aligned_cols=20 Identities=10% Similarity=0.218 Sum_probs=12.5
Q ss_pred cchhhhhhhhhhhhhccCCC
Q 013004 50 QLHLLISFLIFIRVLQSSSN 69 (451)
Q Consensus 50 ~l~~~~~~~~~~~~l~~~~n 69 (451)
.+...+..++.|+.|.++.|
T Consensus 163 ~L~~ll~~~P~L~~L~L~g~ 182 (362)
T 2ra8_A 163 DLSPVLDAMPLLNNLKIKGT 182 (362)
T ss_dssp BCHHHHHTCTTCCEEEEECC
T ss_pred CHHHHHhcCCCCcEEEEeCC
Confidence 35555566667777777655
No 406
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.07 E-value=5.5e-07 Score=93.79 Aligned_cols=120 Identities=19% Similarity=0.044 Sum_probs=54.9
Q ss_pred hhhhhhhhhhhccCCCcce----------------EEEeecCCccccccCCccccCCCCCCEEeCcCCccC---ccCCcc
Q 013004 54 LISFLIFIRVLQSSSNLFV----------------YLISDLGNAALSGELAPELGQLKNLELLELYGNNLS---GHIPSA 114 (451)
Q Consensus 54 ~~~~~~~~~~l~~~~n~~~----------------~~~~~l~~n~~~g~~p~~l~~l~~L~~L~ls~N~l~---~~~p~~ 114 (451)
.+..++.|+.|+++.|.+. +..++|++|.+.+ +|..+..+++|+.|+++.+... +..+..
T Consensus 187 ~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~ 265 (592)
T 3ogk_B 187 LAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMN 265 (592)
T ss_dssp HHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSC
T ss_pred HHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHH
Confidence 3344555666666655543 2345566665554 5555555556666655532221 122233
Q ss_pred ccCCCCCcEEeCCCCcCCccCcccccCCcccceeeccccccCCCCh-hhhhcCCCCCeeccC
Q 013004 115 LGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIP-TSLTTITSLNILDLS 175 (451)
Q Consensus 115 ~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p-~~~~~l~~L~~l~ls 175 (451)
+..+++|+.|+++++.. +.+|..+..+++|++|+|++|.+++... ..+..+++|+.|+++
T Consensus 266 l~~~~~L~~L~l~~~~~-~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~ 326 (592)
T 3ogk_B 266 LVFPRKLCRLGLSYMGP-NEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETR 326 (592)
T ss_dssp CCCCTTCCEEEETTCCT-TTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEE
T ss_pred hhccccccccCccccch-hHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEecc
Confidence 44444444444444322 2344444444444444444444432211 223444444444444
No 407
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.04 E-value=1.5e-05 Score=74.18 Aligned_cols=129 Identities=18% Similarity=0.135 Sum_probs=84.8
Q ss_pred cCccCCc-eEEEEEeC-CCCEEEEEEcccccccccHHHHHHHHHHHhcCC-CCCccceeeEEecCCeeeEEEecCCCCCh
Q 013004 307 LGRGGFG-KVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAV-HRNLLRLYGFCTTVTEKLLVYPYMTNGSV 383 (451)
Q Consensus 307 lG~G~fg-~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lv~ey~~~gsL 383 (451)
+..|..| .||+.... ++..+.+|+-+.. ....+.+|...+..+. +--+.++++++...+..++|||++++.++
T Consensus 32 ~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~----~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~ 107 (272)
T 4gkh_A 32 DNVGQSGATIYRLYGKPNAPELFLKHGKGS----VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTA 107 (272)
T ss_dssp EECSSSSCEEEEEECCTTCCCEEEEEEETH----HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEH
T ss_pred ccCCCcCCeEEEEEecCCCeEEEEEECCCC----CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccc
Confidence 4445555 68987754 4567888876432 2336788888887664 44466788888888899999999999877
Q ss_pred hHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcC--------------------------------------------
Q 013004 384 ASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEH-------------------------------------------- 419 (451)
Q Consensus 384 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~-------------------------------------------- 419 (451)
.+...... .....++.+++..|.-||+.
T Consensus 108 ~~~~~~~~--------~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (272)
T 4gkh_A 108 FQVLEEYP--------DSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQV 179 (272)
T ss_dssp HHHHHHCG--------GGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHH
T ss_pred cccccCCH--------HHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHH
Confidence 65543210 11223444445555555531
Q ss_pred -----------CCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 420 -----------CDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 420 -----------~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
..+.++|+|+.+.|||+++++..-|.||
T Consensus 180 ~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDw 218 (272)
T 4gkh_A 180 WKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDV 218 (272)
T ss_dssp HHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCC
T ss_pred HHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEEC
Confidence 1223799999999999998765566665
No 408
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.04 E-value=1.4e-05 Score=76.22 Aligned_cols=75 Identities=12% Similarity=0.086 Sum_probs=52.0
Q ss_pred CCccCccCCceEEEEEeCCCCEEEEEEcccccccccHHHHHHHHHHHhcCCCC---CccceeeEEe-cCCeeeEEEecCC
Q 013004 304 KNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHR---NLLRLYGFCT-TVTEKLLVYPYMT 379 (451)
Q Consensus 304 ~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~---niv~l~~~~~-~~~~~~lv~ey~~ 379 (451)
.+.++.|....||+. ++.+++|+-.. ......+.+|.+++..+.+. .+.+.+.++. ..+..+++|||++
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~~---~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~ 96 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPKS---QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQ 96 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESS---HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCC
T ss_pred eeecCCCcceeEEEE----CCEEEEEecCC---chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccC
Confidence 355777888889987 45677887422 12234688999999888753 2456666664 3455789999999
Q ss_pred CCChhH
Q 013004 380 NGSVAS 385 (451)
Q Consensus 380 ~gsL~~ 385 (451)
|..+.+
T Consensus 97 G~~l~~ 102 (306)
T 3tdw_A 97 GQILGE 102 (306)
T ss_dssp SEECHH
T ss_pred CeECch
Confidence 987765
No 409
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.02 E-value=1.5e-06 Score=76.49 Aligned_cols=94 Identities=22% Similarity=0.216 Sum_probs=74.9
Q ss_pred CccccCCCCCCEEeCcCC-ccCcc----CCccccCCCCCcEEeCCCCcCCcc----CcccccCCcccceeeccccccCCC
Q 013004 88 APELGQLKNLELLELYGN-NLSGH----IPSALGNLIKLKSLDLYSNLFNGT----IPDTLANLKQLKYLRLNNNSLSGL 158 (451)
Q Consensus 88 p~~l~~l~~L~~L~ls~N-~l~~~----~p~~~~~l~~L~~L~ls~N~l~g~----~p~~~~~l~~L~~L~ls~N~l~~~ 158 (451)
...+...++|+.|+|++| .++.. +...+...++|+.|+|++|.+... +...+...++|++|+|++|.+...
T Consensus 29 ~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~ 108 (185)
T 1io0_A 29 KRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGS 108 (185)
T ss_dssp HHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHH
T ss_pred HHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHH
Confidence 445677899999999999 88742 455677789999999999999742 344556668899999999999753
Q ss_pred ----ChhhhhcCCCCCeecc--CCccccC
Q 013004 159 ----IPTSLTTITSLNILDL--SNNRLSG 181 (451)
Q Consensus 159 ----~p~~~~~l~~L~~l~l--s~N~l~~ 181 (451)
+...+...++|+.|++ ++|.++.
T Consensus 109 g~~~l~~~L~~n~~L~~L~L~~~~N~i~~ 137 (185)
T 1io0_A 109 GILALVEALQSNTSLIELRIDNQSQPLGN 137 (185)
T ss_dssp HHHHHHHGGGGCSSCCEEECCCCSSCCCH
T ss_pred HHHHHHHHHHhCCCceEEEecCCCCCCCH
Confidence 4567777889999999 8898864
No 410
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=97.98 E-value=9.6e-06 Score=78.02 Aligned_cols=88 Identities=15% Similarity=0.126 Sum_probs=73.0
Q ss_pred CCCCCEEeCcCCccCccCCccccCCCCCcEEeCCCCcCCccCcccccCCcccc-eeeccccccCCCChhhhhcCCCCCee
Q 013004 94 LKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLK-YLRLNNNSLSGLIPTSLTTITSLNIL 172 (451)
Q Consensus 94 l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~-~L~ls~N~l~~~~p~~~~~l~~L~~l 172 (451)
+++|+.|+|++|+++...+..|.+|.+|+.|+|++| ++..-+.+|.++++|+ .+++.+ .++..-+.+|..+++|+.+
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l 302 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYV 302 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEE
T ss_pred cCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEE
Confidence 789999999999998555667899999999999998 7644556789999999 999988 6765666889999999999
Q ss_pred ccCCccccCcC
Q 013004 173 DLSNNRLSGPV 183 (451)
Q Consensus 173 ~ls~N~l~~~~ 183 (451)
++++|.++...
T Consensus 303 ~l~~n~i~~I~ 313 (329)
T 3sb4_A 303 LATGDKITTLG 313 (329)
T ss_dssp EECSSCCCEEC
T ss_pred EeCCCccCccc
Confidence 99888887543
No 411
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=97.91 E-value=1.5e-05 Score=77.48 Aligned_cols=80 Identities=8% Similarity=-0.019 Sum_probs=52.9
Q ss_pred Ccc-CccCCceEEEEEeC-------CCCEEEEEEcccccc--cccHHHHHHHHHHHhcCC-C--CCccceeeEEecC---
Q 013004 305 NIL-GRGGFGKVYKGRLA-------DGKLVAVKRLKEERT--SGGELQFQTEVKIISMAV-H--RNLLRLYGFCTTV--- 368 (451)
Q Consensus 305 ~~l-G~G~fg~Vy~~~~~-------~~~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~-H--~niv~l~~~~~~~--- 368 (451)
+.| +.|....+|+.... +++.+++|....... ......+.+|..++..+. + ..+.+++.++...
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 456 78888999988754 256788887644320 101135678888887664 2 3466777777654
Q ss_pred CeeeEEEecCCCCChh
Q 013004 369 TEKLLVYPYMTNGSVA 384 (451)
Q Consensus 369 ~~~~lv~ey~~~gsL~ 384 (451)
+..++||||++|..+.
T Consensus 106 g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPP 121 (357)
T ss_dssp SSCEEEEECCCCBCCC
T ss_pred CCceEEEEecCCCChh
Confidence 3468999999987654
No 412
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=97.87 E-value=3e-05 Score=75.74 Aligned_cols=73 Identities=5% Similarity=-0.014 Sum_probs=53.1
Q ss_pred CCccCccCCceEEEEEeCCCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCC--ccceeeEEecC-CeeeEEEecCCC
Q 013004 304 KNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRN--LLRLYGFCTTV-TEKLLVYPYMTN 380 (451)
Q Consensus 304 ~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~n--iv~l~~~~~~~-~~~~lv~ey~~~ 380 (451)
.+.++.|....+|+... +++.+++|..... ..+.+|...+..+.... +.+++.++... +..|++|||++|
T Consensus 46 i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~------~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G 118 (362)
T 3ovc_A 46 LMQLSEGEESRAFSFDV-GGRGYVLRVNSCA------DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQG 118 (362)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEESCC------HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCS
T ss_pred EEECCCCCcceEEEEEE-CCcEEEEEeCCch------hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCC
Confidence 45678899999999886 5778888876432 25788888888776433 45667666654 568999999997
Q ss_pred CCh
Q 013004 381 GSV 383 (451)
Q Consensus 381 gsL 383 (451)
.++
T Consensus 119 ~~l 121 (362)
T 3ovc_A 119 VTL 121 (362)
T ss_dssp EET
T ss_pred CCc
Confidence 654
No 413
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=97.84 E-value=4e-07 Score=94.83 Aligned_cols=104 Identities=13% Similarity=0.146 Sum_probs=65.7
Q ss_pred ecCCccccccCCcccc-CCCCCCEEeCc--C----CccCcc-----CCccccCCCCCcEEeCCCCcCCccCcccccC-Cc
Q 013004 77 DLGNAALSGELAPELG-QLKNLELLELY--G----NNLSGH-----IPSALGNLIKLKSLDLYSNLFNGTIPDTLAN-LK 143 (451)
Q Consensus 77 ~l~~n~~~g~~p~~l~-~l~~L~~L~ls--~----N~l~~~-----~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~-l~ 143 (451)
.++.|.+++..+..+. .+++|+.|+++ + |.+++. ++..+..+++|+.|++++ .+++..+..++. ++
T Consensus 378 ~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~ 456 (594)
T 2p1m_B 378 LYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAK 456 (594)
T ss_dssp EEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCT
T ss_pred HHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhch
Confidence 4455555554445554 46777777777 3 455521 112255667788888866 555554555554 77
Q ss_pred ccceeeccccccCCCChhhh-hcCCCCCeeccCCccccC
Q 013004 144 QLKYLRLNNNSLSGLIPTSL-TTITSLNILDLSNNRLSG 181 (451)
Q Consensus 144 ~L~~L~ls~N~l~~~~p~~~-~~l~~L~~l~ls~N~l~~ 181 (451)
+|+.|+|++|.+++..+..+ ..+++|+.|++++|.+++
T Consensus 457 ~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~ 495 (594)
T 2p1m_B 457 KMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGD 495 (594)
T ss_dssp TCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCH
T ss_pred hccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcH
Confidence 78888888888765544444 567888888888888754
No 414
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=97.80 E-value=8.6e-07 Score=92.28 Aligned_cols=89 Identities=16% Similarity=0.167 Sum_probs=72.2
Q ss_pred ccCCCCCCEEeCcCCccCccCCccccC-CCCCcEEeCCCCcCCccCcccc-cCCcccceeeccccccCCCChh-hhhcCC
Q 013004 91 LGQLKNLELLELYGNNLSGHIPSALGN-LIKLKSLDLYSNLFNGTIPDTL-ANLKQLKYLRLNNNSLSGLIPT-SLTTIT 167 (451)
Q Consensus 91 l~~l~~L~~L~ls~N~l~~~~p~~~~~-l~~L~~L~ls~N~l~g~~p~~~-~~l~~L~~L~ls~N~l~~~~p~-~~~~l~ 167 (451)
+..+++|+.|++++ .+++..+..+.. +++|+.|+|++|.+++..+..+ ..+++|+.|+|++|.+++..+. .+..++
T Consensus 428 ~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~ 506 (594)
T 2p1m_B 428 VEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLE 506 (594)
T ss_dssp HHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGG
T ss_pred HhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCC
Confidence 66789999999977 777666666665 8999999999999986655555 6789999999999999654443 345588
Q ss_pred CCCeeccCCcccc
Q 013004 168 SLNILDLSNNRLS 180 (451)
Q Consensus 168 ~L~~l~ls~N~l~ 180 (451)
+|+.|++++|+++
T Consensus 507 ~L~~L~l~~~~~~ 519 (594)
T 2p1m_B 507 TMRSLWMSSCSVS 519 (594)
T ss_dssp GSSEEEEESSCCB
T ss_pred CCCEEeeeCCCCC
Confidence 9999999999884
No 415
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.77 E-value=6.9e-05 Score=72.00 Aligned_cols=137 Identities=16% Similarity=0.226 Sum_probs=73.8
Q ss_pred CccCccCCceEEEEEeCCCCEEEEEEcccccccccHHHHHHHHHHHhcC-----CCCCcccee-e--EEecCCeeeEEEe
Q 013004 305 NILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMA-----VHRNLLRLY-G--FCTTVTEKLLVYP 376 (451)
Q Consensus 305 ~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-----~H~niv~l~-~--~~~~~~~~~lv~e 376 (451)
+.++.|..+.||+....+| .+++|+.... ......|..++..+ ..|.++... | +....+..++++|
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~-----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~ 111 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRP-----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYD 111 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSC-----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEE
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCC-----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEE
Confidence 4466677889999987655 5889987542 11233344433322 234444311 1 1123566799999
Q ss_pred cCCCCChh--------------HHhhccCCCC----------CCCCHHHHH-----------------------------
Q 013004 377 YMTNGSVA--------------SRLRERQSSL----------PPLDWPTRK----------------------------- 403 (451)
Q Consensus 377 y~~~gsL~--------------~~l~~~~~~~----------~~l~~~~~~----------------------------- 403 (451)
|++|..+. ..++...... ..-.|....
T Consensus 112 ~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 191 (346)
T 2q83_A 112 WIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQE 191 (346)
T ss_dssp CCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHH
T ss_pred eecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHH
Confidence 99986542 1122110000 012343211
Q ss_pred --HHHHHHHHHHHhHhc----------CCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 404 --KIALGSARGLSYLHE----------HCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 404 --~i~~~ia~~L~yLH~----------~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
.+...+..++++|+. ...+.++|+|+++.|||++.++.+.+.||
T Consensus 192 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDf 247 (346)
T 2q83_A 192 IDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDL 247 (346)
T ss_dssp HHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCC
T ss_pred HHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEeh
Confidence 011123345666653 12458999999999999988778888887
No 416
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.75 E-value=8.3e-05 Score=73.39 Aligned_cols=76 Identities=11% Similarity=0.031 Sum_probs=47.9
Q ss_pred CCccCccCCceEEEEEeC-CCCEEEEEEcccccc------cccHHHHHHHHHHHhcCCC--CCc-cceeeEEecCCeeeE
Q 013004 304 KNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT------SGGELQFQTEVKIISMAVH--RNL-LRLYGFCTTVTEKLL 373 (451)
Q Consensus 304 ~~~lG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~------~~~~~~~~~E~~~l~~l~H--~ni-v~l~~~~~~~~~~~l 373 (451)
.+.+|.|.++.||++... +++.++||....... ......+..|.+++..+.. +.. .+++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 356899999999999754 467899997643211 0122356778888876632 333 345543 3445689
Q ss_pred EEecCCCC
Q 013004 374 VYPYMTNG 381 (451)
Q Consensus 374 v~ey~~~g 381 (451)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999864
No 417
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.66 E-value=0.00019 Score=67.48 Aligned_cols=77 Identities=17% Similarity=0.217 Sum_probs=53.8
Q ss_pred CCCCCccCccCCceEEEEEeCCCCEEEEEEcccccccccHHHHHHHHHHHhcCCC---CCccceeeEEecCCeeeEEEec
Q 013004 301 FSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVH---RNLLRLYGFCTTVTEKLLVYPY 377 (451)
Q Consensus 301 f~~~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H---~niv~l~~~~~~~~~~~lv~ey 377 (451)
+...+.+|.|..+.||+.+..||+.|.+|+-..... .....|.+|.+.|+.+.- --+.+.+++. ..++||||
T Consensus 17 v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~-~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e~ 91 (288)
T 3f7w_A 17 VAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAP-ALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEW 91 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCC-CCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEEC
T ss_pred eEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCc-chhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEEe
Confidence 344567899999999999999999999998654322 222357889988876642 2234444432 34789999
Q ss_pred CCCCC
Q 013004 378 MTNGS 382 (451)
Q Consensus 378 ~~~gs 382 (451)
++++.
T Consensus 92 l~~~~ 96 (288)
T 3f7w_A 92 VDERP 96 (288)
T ss_dssp CCCCC
T ss_pred ecccC
Confidence 98765
No 418
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.62 E-value=0.0002 Score=68.31 Aligned_cols=138 Identities=16% Similarity=0.181 Sum_probs=89.5
Q ss_pred CCccCccCCceEEEEEeCCCCEEEEEEcccccccccHHHHHHHHHHHhcCC---CCCccceeeEEecCCeeeEEEecCCC
Q 013004 304 KNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAV---HRNLLRLYGFCTTVTEKLLVYPYMTN 380 (451)
Q Consensus 304 ~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~---H~niv~l~~~~~~~~~~~lv~ey~~~ 380 (451)
.+.|+.|.+..+|+... +++.+++|+.... ....+.+|.+.+..+. ...+.+.+.++...+..++||||+++
T Consensus 41 ~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~----~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G 115 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLIND-EVQTVFVKINERS----YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNK 115 (312)
T ss_dssp EEEECCSSSSEEEEEES-SSCEEEEEEEEGG----GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCC
T ss_pred eEEeCCccceeeeEEEE-CCCeEEEEeCCcc----cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccC
Confidence 45689999999999886 4677888876432 2346888988887664 35678888888877889999999998
Q ss_pred CChh-----------HHhhccCC-C-C----------------CCCCHHHHH---HHHHH----------------HHH-
Q 013004 381 GSVA-----------SRLRERQS-S-L----------------PPLDWPTRK---KIALG----------------SAR- 411 (451)
Q Consensus 381 gsL~-----------~~l~~~~~-~-~----------------~~l~~~~~~---~i~~~----------------ia~- 411 (451)
..+. ..++.... . . -.-+|.+.. ++..+ +..
T Consensus 116 ~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~ 195 (312)
T 3jr1_A 116 SKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQI 195 (312)
T ss_dssp CCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHH
T ss_pred CCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHH
Confidence 7542 12222211 0 0 012565432 11111 111
Q ss_pred HHHhHhc-CCCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 412 GLSYLHE-HCDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 412 ~L~yLH~-~~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
....|.. ...|.++|+|+.+.|++++.++ +.+.|+
T Consensus 196 l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~ 231 (312)
T 3jr1_A 196 VADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNP 231 (312)
T ss_dssp HHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSC
T ss_pred HHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcC
Confidence 1223421 2367899999999999999887 777775
No 419
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.46 E-value=3.9e-05 Score=66.43 Aligned_cols=92 Identities=12% Similarity=0.075 Sum_probs=66.0
Q ss_pred CCccccCCCCCCEEeCcCCccCccCCccccCCCCCcEEeCCCCc-CCccCcccccCC----cccceeeccccc-cCCCCh
Q 013004 87 LAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNL-FNGTIPDTLANL----KQLKYLRLNNNS-LSGLIP 160 (451)
Q Consensus 87 ~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~-l~g~~p~~~~~l----~~L~~L~ls~N~-l~~~~p 160 (451)
+|.....-.+|+.||++++.++..--..+..|++|+.|+|+++. +++.-=..++.+ ++|++|+|+++. ++..--
T Consensus 53 LP~~~~~~~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl 132 (176)
T 3e4g_A 53 LPTGPLDKYKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGI 132 (176)
T ss_dssp SCCCSTTCCCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHH
T ss_pred CCcccCCCceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHH
Confidence 45443334578999999998886545567889999999999985 654322335554 379999999975 664333
Q ss_pred hhhhcCCCCCeeccCCcc
Q 013004 161 TSLTTITSLNILDLSNNR 178 (451)
Q Consensus 161 ~~~~~l~~L~~l~ls~N~ 178 (451)
..+..+++|+.|++++..
T Consensus 133 ~~L~~~~~L~~L~L~~c~ 150 (176)
T 3e4g_A 133 IALHHFRNLKYLFLSDLP 150 (176)
T ss_dssp HHGGGCTTCCEEEEESCT
T ss_pred HHHhcCCCCCEEECCCCC
Confidence 567888999999988753
No 420
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=97.34 E-value=4e-05 Score=74.77 Aligned_cols=40 Identities=18% Similarity=0.353 Sum_probs=20.9
Q ss_pred CcccceeeccccccCCCChhhhh---cCCCCCeeccCCccccC
Q 013004 142 LKQLKYLRLNNNSLSGLIPTSLT---TITSLNILDLSNNRLSG 181 (451)
Q Consensus 142 l~~L~~L~ls~N~l~~~~p~~~~---~l~~L~~l~ls~N~l~~ 181 (451)
+++|+.|+|++|.+....+..+. .+++|+.||++.|.+++
T Consensus 251 ~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d 293 (362)
T 2ra8_A 251 FPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTD 293 (362)
T ss_dssp CTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBH
T ss_pred CCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCCh
Confidence 45566666666555433333332 24456666666665544
No 421
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.19 E-value=0.0013 Score=65.35 Aligned_cols=74 Identities=14% Similarity=0.093 Sum_probs=44.8
Q ss_pred CCccCccCCceEEEEEeCCCCEEEEEEccccc---cc-----ccHHHHHHHHHHHh-cCCCCCccceeeEEecCCeeeEE
Q 013004 304 KNILGRGGFGKVYKGRLADGKLVAVKRLKEER---TS-----GGELQFQTEVKIIS-MAVHRNLLRLYGFCTTVTEKLLV 374 (451)
Q Consensus 304 ~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~---~~-----~~~~~~~~E~~~l~-~l~H~niv~l~~~~~~~~~~~lv 374 (451)
.+.+|.|..+.||++.. +++.++||...... .. .....+..|+..+. ......+.+++.+. ....++|
T Consensus 39 i~~l~~G~~n~vyrv~~-~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~~~--~~~~~lv 115 (420)
T 2pyw_A 39 IKEVGDGNLNFVFIVVG-SSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFD--RTMALIG 115 (420)
T ss_dssp EEECCCSSSCEEEEEEC-SSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHSGGGSCCEEEEE--TTTTEEE
T ss_pred EEEccCCCcEEEEEEEc-CCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhCCCCCCeEEEEC--CCccEEE
Confidence 45689999999999965 46789999432110 00 12223444544332 12234556666654 4667999
Q ss_pred EecC-CC
Q 013004 375 YPYM-TN 380 (451)
Q Consensus 375 ~ey~-~~ 380 (451)
|||+ ++
T Consensus 116 ~e~l~~g 122 (420)
T 2pyw_A 116 MRYLEPP 122 (420)
T ss_dssp ECCCCTT
T ss_pred EeecCCc
Confidence 9999 76
No 422
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.15 E-value=0.00069 Score=55.61 Aligned_cols=55 Identities=24% Similarity=0.329 Sum_probs=28.1
Q ss_pred EEeCcCCccC-ccCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeecccccc
Q 013004 99 LLELYGNNLS-GHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSL 155 (451)
Q Consensus 99 ~L~ls~N~l~-~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l 155 (451)
.++-+++.++ ..+|..+. .+|+.|+|++|+|+..-+..|..+++|+.|+|++|.+
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 4555555554 23443332 3455556666655533333445555555555555555
No 423
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=97.12 E-value=0.00093 Score=66.01 Aligned_cols=81 Identities=19% Similarity=0.194 Sum_probs=60.9
Q ss_pred CCCCEEeCcCCccCccCCccccCCCCCcEEeCCCCcCC-----ccCcccccCCcccceeeccccccCCCChhhhhcCCCC
Q 013004 95 KNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFN-----GTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSL 169 (451)
Q Consensus 95 ~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~-----g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L 169 (451)
.+|+.+.+ .|.++..-+..|.+|.+|+.+++.+|.+. ..-+..|.++++|+.++|. |.++..-..+|..+.+|
T Consensus 248 ~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L 325 (401)
T 4fdw_A 248 SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKV 325 (401)
T ss_dssp CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSC
T ss_pred CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCc
Confidence 67888888 45566455677888899999998888764 2334568888889999888 44765556788888889
Q ss_pred CeeccCCc
Q 013004 170 NILDLSNN 177 (451)
Q Consensus 170 ~~l~ls~N 177 (451)
+.+++..|
T Consensus 326 ~~l~lp~~ 333 (401)
T 4fdw_A 326 TQLTIPAN 333 (401)
T ss_dssp CEEEECTT
T ss_pred cEEEECcc
Confidence 98888665
No 424
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.08 E-value=0.00074 Score=55.43 Aligned_cols=57 Identities=21% Similarity=0.287 Sum_probs=48.1
Q ss_pred cEEeCCCCcCC-ccCcccccCCcccceeeccccccCCCChhhhhcCCCCCeeccCCcccc
Q 013004 122 KSLDLYSNLFN-GTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSNNRLS 180 (451)
Q Consensus 122 ~~L~ls~N~l~-g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~ 180 (451)
..++.+++.++ ..+|..+. .+|+.|+|++|+|+...+..|..+++|+.|+|++|.+.
T Consensus 11 ~~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TEEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CEEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 47899999986 46776542 47999999999999877778899999999999999875
No 425
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=96.98 E-value=0.0022 Score=63.26 Aligned_cols=63 Identities=14% Similarity=0.141 Sum_probs=35.0
Q ss_pred ccccCCCCCCEEeCcCCccCccCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeecccc
Q 013004 89 PELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNN 153 (451)
Q Consensus 89 ~~l~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N 153 (451)
..+.+|.+|+.+++++|.++ .+|...-.+.+|+.+.+..| ++..-..+|.++++|+.+++.+|
T Consensus 174 ~aF~~c~~L~~l~l~~n~l~-~I~~~aF~~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~ 236 (401)
T 4fdw_A 174 DIFYYCYNLKKADLSKTKIT-KLPASTFVYAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN 236 (401)
T ss_dssp STTTTCTTCCEEECTTSCCS-EECTTTTTTCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT
T ss_pred HHhhCcccCCeeecCCCcce-EechhhEeecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC
Confidence 34566777777777777766 33333333566666666533 44233344555556666665543
No 426
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.67 E-value=0.00043 Score=60.94 Aligned_cols=90 Identities=14% Similarity=0.151 Sum_probs=43.5
Q ss_pred ccccCCCCCCEEeCcCCccCcc----CCccccCCCCCcEEeCCCCcCCcc----CcccccCCcccceeecccc---ccCC
Q 013004 89 PELGQLKNLELLELYGNNLSGH----IPSALGNLIKLKSLDLYSNLFNGT----IPDTLANLKQLKYLRLNNN---SLSG 157 (451)
Q Consensus 89 ~~l~~l~~L~~L~ls~N~l~~~----~p~~~~~l~~L~~L~ls~N~l~g~----~p~~~~~l~~L~~L~ls~N---~l~~ 157 (451)
+.+..-+.|+.|+|++|++... +.+.+..-+.|+.|+|++|.|.+. +-+.+..-+.|+.|+|++| .+..
T Consensus 64 ~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~ 143 (197)
T 1pgv_A 64 EAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGN 143 (197)
T ss_dssp HHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCH
T ss_pred HHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCcCcCcCH
Confidence 3344455666666666666532 223333445566666666666522 1223333445666666543 2221
Q ss_pred ----CChhhhhcCCCCCeeccCCcc
Q 013004 158 ----LIPTSLTTITSLNILDLSNNR 178 (451)
Q Consensus 158 ----~~p~~~~~l~~L~~l~ls~N~ 178 (451)
.+...+..-+.|..|+++.|.
T Consensus 144 ~g~~~ia~aL~~N~tL~~L~l~~~~ 168 (197)
T 1pgv_A 144 QVEMDMMMAIEENESLLRVGISFAS 168 (197)
T ss_dssp HHHHHHHHHHHHCSSCCEEECCCCC
T ss_pred HHHHHHHHHHHhCCCcCeEeccCCC
Confidence 122334444556666655443
No 427
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=96.51 E-value=0.0047 Score=58.18 Aligned_cols=71 Identities=8% Similarity=0.028 Sum_probs=41.8
Q ss_pred CCccCccCCceEEEEEeCCCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCc-cceeeEEecCCeeeEEEecC-CCC
Q 013004 304 KNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNL-LRLYGFCTTVTEKLLVYPYM-TNG 381 (451)
Q Consensus 304 ~~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~~~~~~~~~~~lv~ey~-~~g 381 (451)
.+.|+.|....+|+. +.+.+|+....... .....+|...+..+....+ .+++++ ..+.-++++||+ ++.
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~--~~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~g~ 93 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEE--YINRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAGAQ 93 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC------CCCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTTCE
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccc--eeCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCCCc
Confidence 577888999999998 45778876542111 1123467766665542223 344443 344467999999 554
Q ss_pred Ch
Q 013004 382 SV 383 (451)
Q Consensus 382 sL 383 (451)
++
T Consensus 94 ~l 95 (301)
T 3dxq_A 94 TM 95 (301)
T ss_dssp EC
T ss_pred cC
Confidence 33
No 428
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.50 E-value=0.0066 Score=57.96 Aligned_cols=76 Identities=12% Similarity=0.033 Sum_probs=37.2
Q ss_pred CccCccCCce-EEEEEeCCCCEEEEEEcccccccccHHHHHHHHHHHhcCC--CCCccceeeEEecCCeeeEEEecCCCC
Q 013004 305 NILGRGGFGK-VYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAV--HRNLLRLYGFCTTVTEKLLVYPYMTNG 381 (451)
Q Consensus 305 ~~lG~G~fg~-Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~--H~niv~l~~~~~~~~~~~lv~ey~~~g 381 (451)
+.++.|.... +|+....+++.+.+|....... ..+..|+.++..+. .-.+.+++.+.... -+++||++.+.
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~----~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~--g~ll~e~l~~~ 97 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG----GDTQPFVDLAQYLRNLDISAPEIYAEEHAR--GLLLIEDLGDA 97 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTTT----CCSHHHHHHHHHHHHTTCBCCCEEEEETTT--TEEEECCCCSC
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCCC----ccccHHHHHHHHHHhCCCCCCceeeecCCC--CEEEEeeCCCc
Confidence 3455554444 6677654467777776543210 12344555555443 22345566654333 37899999776
Q ss_pred ChhHH
Q 013004 382 SVASR 386 (451)
Q Consensus 382 sL~~~ 386 (451)
.+.+.
T Consensus 98 ~l~~~ 102 (333)
T 3csv_A 98 LFTEV 102 (333)
T ss_dssp BHHHH
T ss_pred chHHH
Confidence 65443
No 429
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=96.43 E-value=0.00079 Score=58.13 Aligned_cols=85 Identities=15% Similarity=0.143 Sum_probs=62.9
Q ss_pred ceEEEeecCCccccccCCccccCCCCCCEEeCcCCc-cCccCCccccCC----CCCcEEeCCCCc-CCccCcccccCCcc
Q 013004 71 FVYLISDLGNAALSGELAPELGQLKNLELLELYGNN-LSGHIPSALGNL----IKLKSLDLYSNL-FNGTIPDTLANLKQ 144 (451)
Q Consensus 71 ~~~~~~~l~~n~~~g~~p~~l~~l~~L~~L~ls~N~-l~~~~p~~~~~l----~~L~~L~ls~N~-l~g~~p~~~~~l~~ 144 (451)
+.+..+||+++.++..--..+..+++|+.|+|+++. ++..-=..++.+ ++|+.|+|+++. ++..-=..++++++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 455667788777766555667899999999999985 765433345553 479999999974 76433345778999
Q ss_pred cceeecccccc
Q 013004 145 LKYLRLNNNSL 155 (451)
Q Consensus 145 L~~L~ls~N~l 155 (451)
|++|+|+++.-
T Consensus 141 L~~L~L~~c~~ 151 (176)
T 3e4g_A 141 LKYLFLSDLPG 151 (176)
T ss_dssp CCEEEEESCTT
T ss_pred CCEEECCCCCC
Confidence 99999999863
No 430
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.32 E-value=0.006 Score=60.69 Aligned_cols=71 Identities=18% Similarity=0.260 Sum_probs=46.4
Q ss_pred CccCccCCceEEEEEeCC--------CCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCc-cceeeEEecCCeeeEEE
Q 013004 305 NILGRGGFGKVYKGRLAD--------GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNL-LRLYGFCTTVTEKLLVY 375 (451)
Q Consensus 305 ~~lG~G~fg~Vy~~~~~~--------~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~~~~~~~~~~~lv~ 375 (451)
+.|+.|....||+....+ ++.+.+|+.... .....+.+|..++..+...++ .++++.+.. .+|+
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~---~~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~ 151 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP---ETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLE 151 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC---CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEE
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC---CcHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEE
Confidence 457778888999998753 478888887331 111345578888876653333 566665432 3899
Q ss_pred ecCCCCC
Q 013004 376 PYMTNGS 382 (451)
Q Consensus 376 ey~~~gs 382 (451)
||++|.+
T Consensus 152 e~l~G~~ 158 (429)
T 1nw1_A 152 EYIPSRP 158 (429)
T ss_dssp CCCCEEE
T ss_pred EEeCCcc
Confidence 9998643
No 431
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.31 E-value=0.0012 Score=58.22 Aligned_cols=87 Identities=14% Similarity=0.153 Sum_probs=63.9
Q ss_pred ccCCCCCCEEeCcCC-ccCc----cCCccccCCCCCcEEeCCCCcCCcc----CcccccCCcccceeeccccccCCC---
Q 013004 91 LGQLKNLELLELYGN-NLSG----HIPSALGNLIKLKSLDLYSNLFNGT----IPDTLANLKQLKYLRLNNNSLSGL--- 158 (451)
Q Consensus 91 l~~l~~L~~L~ls~N-~l~~----~~p~~~~~l~~L~~L~ls~N~l~g~----~p~~~~~l~~L~~L~ls~N~l~~~--- 158 (451)
+.+-+.|+.|+|++| ++.. .+-..+..-+.|+.|+|++|++... +.+.+..-+.|+.|+|++|.+...
T Consensus 37 l~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ 116 (197)
T 1pgv_A 37 REDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLA 116 (197)
T ss_dssp HTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHH
T ss_pred HhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHH
Confidence 345578999999985 7763 2455567778999999999999743 233445568899999999999743
Q ss_pred -ChhhhhcCCCCCeeccCCc
Q 013004 159 -IPTSLTTITSLNILDLSNN 177 (451)
Q Consensus 159 -~p~~~~~l~~L~~l~ls~N 177 (451)
+-..+..-..|+.|++++|
T Consensus 117 ala~aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 117 RLLRSTLVTQSIVEFKADNQ 136 (197)
T ss_dssp HHHHHTTTTCCCSEEECCCC
T ss_pred HHHHHHhhCCceeEEECCCC
Confidence 2234555567999999865
No 432
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.30 E-value=0.023 Score=53.85 Aligned_cols=75 Identities=19% Similarity=0.111 Sum_probs=45.8
Q ss_pred CccCccCCceEEEEEeCCCCEEEEEEcccccccccHHHHHHHHHHHhcCCC--CCccceeeE-----EecCCeeeEEEec
Q 013004 305 NILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVH--RNLLRLYGF-----CTTVTEKLLVYPY 377 (451)
Q Consensus 305 ~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H--~niv~l~~~-----~~~~~~~~lv~ey 377 (451)
..++ |....||+....+|+.+++|....... ....+..|..++..+.. -.+.+++.. ....+..++++||
T Consensus 32 ~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~--~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~ 108 (328)
T 1zyl_A 32 TPLN-SYENRVYQFQDEDRRRFVVKFYRPERW--TADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPS 108 (328)
T ss_dssp EEEC-CSSSEEEEECCTTCCCEEEEEECTTTS--CHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEEC
T ss_pred Eeec-CcccceEEEEcCCCCEEEEEEcCCCCC--CHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEe
Confidence 3466 777899998776777789998853321 22345667766655532 123444432 1123456789999
Q ss_pred CCCCC
Q 013004 378 MTNGS 382 (451)
Q Consensus 378 ~~~gs 382 (451)
++|..
T Consensus 109 i~G~~ 113 (328)
T 1zyl_A 109 VGGRQ 113 (328)
T ss_dssp CCCEE
T ss_pred cCCCC
Confidence 98754
No 433
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.12 E-value=0.013 Score=57.15 Aligned_cols=137 Identities=14% Similarity=0.154 Sum_probs=74.7
Q ss_pred CccCccCCceEEEEEeCC--------CCEEEEEEcccccccccHHHHHHHHHHHhcCCCCC-ccceeeEEecCCeeeEEE
Q 013004 305 NILGRGGFGKVYKGRLAD--------GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRN-LLRLYGFCTTVTEKLLVY 375 (451)
Q Consensus 305 ~~lG~G~fg~Vy~~~~~~--------~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~n-iv~l~~~~~~~~~~~lv~ 375 (451)
+.+..|-...+|+....+ ++.+.+|+.... ........+|.++++.+.-.. ..++++++.. .+|+
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~--~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~ 129 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI--LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLE 129 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC-----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc--cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEE
Confidence 456667778899988742 468888886331 122345668888887665222 3456665543 3999
Q ss_pred ecCCCCChhH-----------------HhhccCCC-CCCCC--HHHHHHHHHHHHH-------------------HHHhH
Q 013004 376 PYMTNGSVAS-----------------RLRERQSS-LPPLD--WPTRKKIALGSAR-------------------GLSYL 416 (451)
Q Consensus 376 ey~~~gsL~~-----------------~l~~~~~~-~~~l~--~~~~~~i~~~ia~-------------------~L~yL 416 (451)
||++|..+.. .++..... ..... |.+..++..++.. .+..|
T Consensus 130 e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L 209 (379)
T 3feg_A 130 QYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNL 209 (379)
T ss_dssp ECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHH
T ss_pred EEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHH
Confidence 9999754421 11111110 11122 4444444433321 22333
Q ss_pred h----cC-CCCCeeecCCCCCceeeCCC----CCccchhh
Q 013004 417 H----EH-CDPKIIHRDVKAANILLDED----ADQSSKTI 447 (451)
Q Consensus 417 H----~~-~~~~iiHrDlK~~NILld~~----~~~~i~df 447 (451)
. .. ....++|+|+.+.||+++.+ +.+.+.||
T Consensus 210 ~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDw 249 (379)
T 3feg_A 210 RKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDF 249 (379)
T ss_dssp HHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCC
T ss_pred HHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEec
Confidence 2 21 23468999999999999887 56777776
No 434
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=96.12 E-value=0.018 Score=54.46 Aligned_cols=139 Identities=7% Similarity=0.041 Sum_probs=71.7
Q ss_pred CccCccCCceEEEEEeCCCCEEEEEEcccccccccHHHHHHHHHHHhcCCCCC--ccceeeE------EecCCeeeEEEe
Q 013004 305 NILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRN--LLRLYGF------CTTVTEKLLVYP 376 (451)
Q Consensus 305 ~~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~n--iv~l~~~------~~~~~~~~lv~e 376 (451)
+.|+.|....+|+....+| .+++|....... ...+..|..++..+.... +.+++.. ....+..+++++
T Consensus 28 ~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~~---~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~~ 103 (322)
T 2ppq_A 28 KGIAEGVENSNFLLHTTKD-PLILTLYEKRVE---KNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALIS 103 (322)
T ss_dssp EEECC---EEEEEEEESSC-CEEEEEECC------CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEE
T ss_pred eccCCCcccceEEEEeCCc-cEEEEEeCCCCC---HHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEEEE
Confidence 4466788889999987655 577888754211 123455666665443111 2223221 112345689999
Q ss_pred cCCCCChhH--------------HhhccCCC--CC------CCCHHHHHH------------HHHHHHHHHHhHhcC---
Q 013004 377 YMTNGSVAS--------------RLRERQSS--LP------PLDWPTRKK------------IALGSARGLSYLHEH--- 419 (451)
Q Consensus 377 y~~~gsL~~--------------~l~~~~~~--~~------~l~~~~~~~------------i~~~ia~~L~yLH~~--- 419 (451)
|++|..+.. .++..... .. ...|..... +...+...+++++..
T Consensus 104 ~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~~~ 183 (322)
T 2ppq_A 104 FLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWPK 183 (322)
T ss_dssp CCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHCCC
T ss_pred eCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCcc
Confidence 999864311 12211100 00 012332111 011234445555431
Q ss_pred -CCCCeeecCCCCCceeeCCCCCccchhh
Q 013004 420 -CDPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 420 -~~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
..+.++|+|+.+.|||++++....+.||
T Consensus 184 ~~~~~liHgDl~~~Nil~~~~~~~~lIDf 212 (322)
T 2ppq_A 184 DLPAGVIHADLFQDNVFFLGDELSGLIDF 212 (322)
T ss_dssp SSCEEEECSCCCGGGEEEETTEEEEECCC
T ss_pred cCCcccCCCCCCccCEEEeCCceEEEecc
Confidence 2346899999999999998755567776
No 435
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=95.62 E-value=0.013 Score=56.83 Aligned_cols=72 Identities=7% Similarity=0.010 Sum_probs=41.1
Q ss_pred CccCccCCceEEEEEeCC---------CCEEEEEEcccccccccHHHHHHHHHHHhcCCCCC-ccceeeEEecCCeeeEE
Q 013004 305 NILGRGGFGKVYKGRLAD---------GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRN-LLRLYGFCTTVTEKLLV 374 (451)
Q Consensus 305 ~~lG~G~fg~Vy~~~~~~---------~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~n-iv~l~~~~~~~~~~~lv 374 (451)
+.++.|....+|+....+ ++.+.+|+...... .......|..++..+...+ +.++++.. . -+++
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~--~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~~v 112 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVD--ELYNTISEFEVYKTMSKYKIAPQLLNTF--N--GGRI 112 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGG--GTSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCcc--ceecHHHHHHHHHHHHhcCCCCceEEec--C--CcEE
Confidence 446778788999988754 26788887643211 1112356777776664333 33565543 2 3789
Q ss_pred EecCCCCC
Q 013004 375 YPYMTNGS 382 (451)
Q Consensus 375 ~ey~~~gs 382 (451)
|||++|..
T Consensus 113 ~e~i~G~~ 120 (369)
T 3c5i_A 113 EEWLYGDP 120 (369)
T ss_dssp EECCCSEE
T ss_pred EEEecCCc
Confidence 99998754
No 436
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=95.19 E-value=0.056 Score=54.08 Aligned_cols=73 Identities=15% Similarity=0.173 Sum_probs=45.4
Q ss_pred CccCccCCceEEEEEeCC-CCEEEEEEcccccccccHHHHHHHHHHHhcCCCCCc-cceeeEEecCCeeeEEEecCCCCC
Q 013004 305 NILGRGGFGKVYKGRLAD-GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNL-LRLYGFCTTVTEKLLVYPYMTNGS 382 (451)
Q Consensus 305 ~~lG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~~~~~~~~~~~lv~ey~~~gs 382 (451)
+.|+.|-...+|+....+ ++.+.+|+..... .....-.+|..++..+...++ .++++++. + .+|+||++|.+
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~--~~~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~ 187 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKT--DEIINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYA 187 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-C--CSCSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEE
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCCh--hhhcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCcc
Confidence 457778888999998865 4678888764321 111122578888877764444 46666652 2 35999998744
Q ss_pred h
Q 013004 383 V 383 (451)
Q Consensus 383 L 383 (451)
+
T Consensus 188 l 188 (458)
T 2qg7_A 188 L 188 (458)
T ss_dssp C
T ss_pred C
Confidence 3
No 437
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=94.78 E-value=0.068 Score=52.17 Aligned_cols=83 Identities=12% Similarity=0.163 Sum_probs=45.8
Q ss_pred ccCCCCCCEEeCcCCccCccCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeeccccccCCCChhhhhcCCCCC
Q 013004 91 LGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLN 170 (451)
Q Consensus 91 l~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~ 170 (451)
+..+..|+.+.+..+..+ .-...|.++..|+.+.+.. .++..-..+|.++.+|+.+++..+ ++..-..+|..+.+|+
T Consensus 261 F~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~~-~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~ 337 (394)
T 4gt6_A 261 FDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFSS-RITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLE 337 (394)
T ss_dssp TTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECCT-TCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCC
T ss_pred eeecccccEEecccccce-ecCcccccccccccccCCC-cccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCC
Confidence 456677777777554332 3344556666666666653 333222334566666666666543 3323344566666666
Q ss_pred eeccCC
Q 013004 171 ILDLSN 176 (451)
Q Consensus 171 ~l~ls~ 176 (451)
.+.+..
T Consensus 338 ~i~ip~ 343 (394)
T 4gt6_A 338 RIAIPS 343 (394)
T ss_dssp EEEECT
T ss_pred EEEECc
Confidence 666643
No 438
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=94.62 E-value=0.036 Score=54.21 Aligned_cols=82 Identities=11% Similarity=0.044 Sum_probs=37.7
Q ss_pred ccCCCCCCEEeCcCCccCccCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeeccccccCCCChhhhhcCCCCC
Q 013004 91 LGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLN 170 (451)
Q Consensus 91 l~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~ 170 (451)
+..+..|+.+....+.+. ...+..+.+|+.+.+..+ ++..-..+|.++++|+.+++.++ ++..-..+|.++.+|+
T Consensus 272 F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~ 346 (394)
T 4fs7_A 272 FYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLS 346 (394)
T ss_dssp TTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCC
T ss_pred cccccccceeccCceeec---cccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCC
Confidence 344455555554443321 123445555555555443 33122334555555555555433 3322234555555555
Q ss_pred eeccCCc
Q 013004 171 ILDLSNN 177 (451)
Q Consensus 171 ~l~ls~N 177 (451)
.+++..|
T Consensus 347 ~i~lp~~ 353 (394)
T 4fs7_A 347 NINFPLS 353 (394)
T ss_dssp EECCCTT
T ss_pred EEEECcc
Confidence 5555443
No 439
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=94.35 E-value=0.13 Score=49.23 Aligned_cols=27 Identities=19% Similarity=0.272 Sum_probs=23.4
Q ss_pred CCCeeecCCCCCceeeCCCCCccchhh
Q 013004 421 DPKIIHRDVKAANILLDEDADQSSKTI 447 (451)
Q Consensus 421 ~~~iiHrDlK~~NILld~~~~~~i~df 447 (451)
.+.++|+|+.+.||++++++.+.+.||
T Consensus 205 ~~~~~HgD~~~~N~l~~~~~~~~~iD~ 231 (339)
T 3i1a_A 205 KYVLCHSDIHAGNVLVGNEESIYIIDW 231 (339)
T ss_dssp GCEEECSCCCGGGEEECGGGCEEECCC
T ss_pred CceeEeCCCCcCCEEEeCCCeEEEEEC
Confidence 346899999999999998777888887
No 440
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=94.34 E-value=0.093 Score=50.77 Aligned_cols=85 Identities=18% Similarity=0.223 Sum_probs=49.3
Q ss_pred ccCCCCCCEEeCcCCccCccCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeeccccccCCCChhhhhcCCCCC
Q 013004 91 LGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLN 170 (451)
Q Consensus 91 l~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~ 170 (451)
+..+..|+.+.+..+ ++..-...+.++.+|+.+.+..+ +...-...|..+++|+.+++.++.++..-..+|.++.+|+
T Consensus 236 f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~ 313 (379)
T 4h09_A 236 FYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLS 313 (379)
T ss_dssp TTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCC
T ss_pred ccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCC
Confidence 445666777766554 44333445666666777666544 3312233466666777777766666544445666666777
Q ss_pred eeccCCc
Q 013004 171 ILDLSNN 177 (451)
Q Consensus 171 ~l~ls~N 177 (451)
.+++..+
T Consensus 314 ~i~lp~~ 320 (379)
T 4h09_A 314 SVTLPTA 320 (379)
T ss_dssp EEECCTT
T ss_pred EEEcCcc
Confidence 6666543
No 441
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=93.24 E-value=0.31 Score=46.95 Aligned_cols=87 Identities=15% Similarity=0.120 Sum_probs=52.7
Q ss_pred ccCCCCCCEEeCcCCccCccCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeeccccccCCCChhhhhcCCCCC
Q 013004 91 LGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLN 170 (451)
Q Consensus 91 l~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~ 170 (451)
+..+.+|+.+.+..+ +.......+.++..|+.+.+..+ ++..-...|.++.+|+.+.+..+ ++......|..+.+|+
T Consensus 213 f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~ 289 (379)
T 4h09_A 213 FSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLT 289 (379)
T ss_dssp TTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCC
T ss_pred cccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccc
Confidence 445666777777544 33234455667777777777665 44233445666777777777543 4333345677777777
Q ss_pred eeccCCcccc
Q 013004 171 ILDLSNNRLS 180 (451)
Q Consensus 171 ~l~ls~N~l~ 180 (451)
.+++.++.++
T Consensus 290 ~i~l~~~~i~ 299 (379)
T 4h09_A 290 KVVMDNSAIE 299 (379)
T ss_dssp EEEECCTTCC
T ss_pred cccccccccc
Confidence 7777666554
No 442
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=93.10 E-value=0.1 Score=50.95 Aligned_cols=88 Identities=19% Similarity=0.309 Sum_probs=68.4
Q ss_pred cccCCCCCCEEeCcCCccCccCCccccCCCCCcEEeCCCCcCCccCcccccCCcccceeeccccccCCCChhhhhcCCCC
Q 013004 90 ELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSL 169 (451)
Q Consensus 90 ~l~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L 169 (451)
.+.++.+|+.+.+. +.++..-...|.+|.+|+.+++..+ ++..-..+|.++.+|+.+.+..+ ++..-..+|.++.+|
T Consensus 283 aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L 359 (394)
T 4gt6_A 283 AFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTAL 359 (394)
T ss_dssp TTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTC
T ss_pred ccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCC
Confidence 35678999999995 5566455567899999999999876 55233567899999999999765 654446789999999
Q ss_pred CeeccCCcccc
Q 013004 170 NILDLSNNRLS 180 (451)
Q Consensus 170 ~~l~ls~N~l~ 180 (451)
+.+++.+|...
T Consensus 360 ~~i~~~~~~~~ 370 (394)
T 4gt6_A 360 NNIEYSGSRSQ 370 (394)
T ss_dssp CEEEESSCHHH
T ss_pred CEEEECCceee
Confidence 99999887543
No 443
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=92.83 E-value=0.21 Score=48.95 Aligned_cols=26 Identities=27% Similarity=0.245 Sum_probs=22.0
Q ss_pred CCeeecCCCCCceeeCCC------CCccchhh
Q 013004 422 PKIIHRDVKAANILLDED------ADQSSKTI 447 (451)
Q Consensus 422 ~~iiHrDlK~~NILld~~------~~~~i~df 447 (451)
..++|+|+.+.||+++.+ +.+.+.||
T Consensus 244 ~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~ 275 (401)
T 3f2s_A 244 VVFCHNDCQEGNILLLEGRENSEKQKLMLIDF 275 (401)
T ss_dssp EEEECSCCCGGGEEEETTGGGCSSSCEEECCC
T ss_pred eeEEeccCCcccEEEcCCcccCcccceEEEee
Confidence 368999999999999887 67777776
No 444
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=92.33 E-value=0.63 Score=45.15 Aligned_cols=35 Identities=11% Similarity=0.109 Sum_probs=15.3
Q ss_pred CCCCCCEEeCcCCccCccCCccccCCCCCcEEeCCC
Q 013004 93 QLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYS 128 (451)
Q Consensus 93 ~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~ 128 (451)
+|++|+.+.+.. .++..-...|.+|++|+.+++.+
T Consensus 69 ~c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~ 103 (394)
T 4fs7_A 69 GCRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPD 103 (394)
T ss_dssp TCTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCT
T ss_pred CCCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCC
Confidence 344555555532 23322233344555555555543
No 445
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=90.20 E-value=0.045 Score=54.86 Aligned_cols=61 Identities=7% Similarity=0.009 Sum_probs=17.7
Q ss_pred CCccCccCCceEEEEEeCC-CCEEEE------EEccccccc-ccHHHHHHHHHHHhcCCCCCccceeeEEec
Q 013004 304 KNILGRGGFGKVYKGRLAD-GKLVAV------KRLKEERTS-GGELQFQTEVKIISMAVHRNLLRLYGFCTT 367 (451)
Q Consensus 304 ~~~lG~G~fg~Vy~~~~~~-~~~vAv------K~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~ 367 (451)
.+.+| ||.||+|.+.. ..+||| |..+..... +....|.+|..++...+|||+++.+++...
T Consensus 147 ~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~ 215 (463)
T 3cxl_A 147 YEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH 215 (463)
T ss_dssp TTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEEE
T ss_pred cccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEe
Confidence 45565 99999999854 367888 766543322 223468889999999999999999887643
No 446
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=89.95 E-value=0.46 Score=46.83 Aligned_cols=73 Identities=5% Similarity=0.052 Sum_probs=44.7
Q ss_pred CccCccCCceEEEEEeCC--------CCEEEEEEcccccccccHHHHHHHHHHHhcCCCCC-ccceeeEEecCCeeeEEE
Q 013004 305 NILGRGGFGKVYKGRLAD--------GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRN-LLRLYGFCTTVTEKLLVY 375 (451)
Q Consensus 305 ~~lG~G~fg~Vy~~~~~~--------~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~n-iv~l~~~~~~~~~~~lv~ 375 (451)
+.+..|-...+|+....+ ++.+.+|+..... .....-.+|.++++.+...+ ..++++.+. -++|+
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t--~~~idR~~E~~~l~~L~~~gi~P~l~~~~~----~~~I~ 149 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV--GKFYDSKVELDVFRYLSNINIAPNIIADFP----EGRIE 149 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC---CCCCHHHHHHHHHHHHHTTSSCCEEEEET----TEEEE
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc--chhcCHHHHHHHHHHHHhcCCCCCEEEEcC----CCEEE
Confidence 446667778899988753 5788888864321 11112356777776664222 345554332 37899
Q ss_pred ecCCCCCh
Q 013004 376 PYMTNGSV 383 (451)
Q Consensus 376 ey~~~gsL 383 (451)
||++|..+
T Consensus 150 efI~G~~l 157 (424)
T 3mes_A 150 EFIDGEPL 157 (424)
T ss_dssp ECCCSEEC
T ss_pred EEeCCccC
Confidence 99998653
No 447
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=88.26 E-value=0.51 Score=30.10 Aligned_cols=29 Identities=24% Similarity=0.219 Sum_probs=14.7
Q ss_pred cceehhhhhhHHhhhhhhhhhhhhhhcCC
Q 013004 238 AIPVGVALGAALLFAVPVIGFAYWRRTRP 266 (451)
Q Consensus 238 ~i~~~v~vg~~~~~~~~~i~~~~~rrrr~ 266 (451)
.+..+++.|.+.++++.+..++++||++.
T Consensus 12 ~IA~gVVgGv~~~~ii~~~~~~~~RRr~~ 40 (44)
T 2ks1_B 12 SIATGMVGALLLLLVVALGIGLFMRRRHI 40 (44)
T ss_dssp SSTHHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred eEEeehhHHHHHHHHHHHHHHHHhhhhHh
Confidence 34444444444444444555566666554
No 448
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=84.78 E-value=0.76 Score=29.25 Aligned_cols=30 Identities=30% Similarity=0.283 Sum_probs=14.9
Q ss_pred cceehhhhhhHHhhhhhhhhhhhhhhcCCC
Q 013004 238 AIPVGVALGAALLFAVPVIGFAYWRRTRPH 267 (451)
Q Consensus 238 ~i~~~v~vg~~~~~~~~~i~~~~~rrrr~~ 267 (451)
.+..+++.|.++++++.+..++++||++.+
T Consensus 11 aIA~gVVgGv~~v~ii~~~~~~~~RRRr~~ 40 (44)
T 2l2t_A 11 LIAAGVIGGLFILVIVGLTFAVYVRRKSIK 40 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCSS
T ss_pred eEEEeehHHHHHHHHHHHHHHHHhhhhhhh
Confidence 344444444444444445555666665543
No 449
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=80.40 E-value=3.4 Score=36.32 Aligned_cols=81 Identities=7% Similarity=0.012 Sum_probs=57.0
Q ss_pred CCCCCccceeeEEecCCeeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHHhHhcCCCCCeeecCCCCC
Q 013004 353 AVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAA 432 (451)
Q Consensus 353 l~H~niv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlK~~ 432 (451)
..||+.+.. ..-.+.+...+.|+.-+.+.=+..++. .+...+++++..++....++++. +|--+.|+
T Consensus 42 ~~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~ik~-------~~~~eKlr~l~ni~~l~~~~~~r-----~tf~L~P~ 108 (215)
T 4ann_A 42 QHSPYFIDA-ELTELRDSFQIHYDINDNHTPFDNIKS-------FTKNEKLRYLLNIKNLEEVNRTR-----YTFVLAPD 108 (215)
T ss_dssp SCCTTBCCE-EEEECSSEEEEEECCCTTSEEGGGGGG-------SCHHHHHHHHHHGGGGGGGGGSS-----EECCCSGG
T ss_pred ccCCcccce-EEEEcccEEEEEEEcCcccCCHHHHHh-------cCHHHHHHHHHHHHHHHHHhcCc-----eEEEEecc
Confidence 458888866 455566666666665443332333332 57788999999998887777754 67788899
Q ss_pred ceeeCCCCCccchh
Q 013004 433 NILLDEDADQSSKT 446 (451)
Q Consensus 433 NILld~~~~~~i~d 446 (451)
|+++|.++.+++..
T Consensus 109 NL~f~~~~~p~i~~ 122 (215)
T 4ann_A 109 ELFFTRDGLPIAKT 122 (215)
T ss_dssp GEEECTTSCEEESC
T ss_pred eEEEcCCCCEEEEE
Confidence 99999999988753
No 450
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=78.43 E-value=6.4 Score=34.70 Aligned_cols=78 Identities=10% Similarity=0.017 Sum_probs=55.1
Q ss_pred CCCCccceeeEEecCCeeeEEEecCCCCChhHHhhccCCCCCCCCHHHHHHHHHHHHHHHH-hHhcCCCCCeeecCCCCC
Q 013004 354 VHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLS-YLHEHCDPKIIHRDVKAA 432 (451)
Q Consensus 354 ~H~niv~l~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~-yLH~~~~~~iiHrDlK~~ 432 (451)
.||.. -...-.+.+...+.++--+++.-+..++. ++...+++++..++.-.. +++.. +|--+.|+
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~~-------~~~~eKlrll~nl~~L~~~~~~~r-----~tf~l~P~ 113 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIRK-------TTLLSRIRAAIHLVSKVKHHSARR-----LIFIVCPE 113 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHHT-------SCHHHHHHHHHHHHHHHSSCCSSS-----EECCCCGG
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHHh-------cCHHHHHHHHHHHHHHHHHhhhCc-----eeEEEeCc
Confidence 57777 33334566777777776545444444432 677889999998888777 66654 67788899
Q ss_pred ceeeCCCCCccch
Q 013004 433 NILLDEDADQSSK 445 (451)
Q Consensus 433 NILld~~~~~~i~ 445 (451)
||++|.++.+++.
T Consensus 114 NL~f~~~~~p~i~ 126 (219)
T 4ano_A 114 NLMFNRALEPFFL 126 (219)
T ss_dssp GEEECTTCCEEES
T ss_pred eEEEeCCCcEEEE
Confidence 9999999998875
No 451
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=59.76 E-value=5.1 Score=25.40 Aligned_cols=25 Identities=16% Similarity=0.248 Sum_probs=9.9
Q ss_pred ehhhhhhHHhhhhhhhhhhhhhhcC
Q 013004 241 VGVALGAALLFAVPVIGFAYWRRTR 265 (451)
Q Consensus 241 ~~v~vg~~~~~~~~~i~~~~~rrrr 265 (451)
++.++|..+++.+.+..++++|||+
T Consensus 15 a~~vVGvll~vi~~l~~~~~~RRR~ 39 (44)
T 2jwa_A 15 ISAVVGILLVVVLGVVFGILIKRRQ 39 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHhheehhh
Confidence 3334443333333333344445444
No 452
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=56.43 E-value=8.6 Score=23.77 Aligned_cols=8 Identities=50% Similarity=0.928 Sum_probs=3.4
Q ss_pred hhhhhhhh
Q 013004 256 IGFAYWRR 263 (451)
Q Consensus 256 i~~~~~rr 263 (451)
..+++|||
T Consensus 32 ~~~~~~rR 39 (41)
T 2k9y_A 32 VGFFIHRR 39 (41)
T ss_dssp HHHSSSSS
T ss_pred HheeEeee
Confidence 33444444
No 453
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=42.50 E-value=7.9 Score=37.48 Aligned_cols=24 Identities=29% Similarity=0.320 Sum_probs=18.3
Q ss_pred eeecCCCCCceeeC------CCCCccchhh
Q 013004 424 IIHRDVKAANILLD------EDADQSSKTI 447 (451)
Q Consensus 424 iiHrDlK~~NILld------~~~~~~i~df 447 (451)
++|.|+.+.|||+. ++....+.||
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDw 275 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDF 275 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCC
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEech
Confidence 57999999999994 3445666665
No 454
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=42.37 E-value=17 Score=22.19 Aligned_cols=23 Identities=35% Similarity=0.151 Sum_probs=9.3
Q ss_pred ehhhhhhHHhhh-hhhhhhhhhhh
Q 013004 241 VGVALGAALLFA-VPVIGFAYWRR 263 (451)
Q Consensus 241 ~~v~vg~~~~~~-~~~i~~~~~rr 263 (451)
++++++.++.++ +..+.+++|||
T Consensus 14 AGiVvG~v~gv~li~~l~~~~~rr 37 (38)
T 2k1k_A 14 VAVIFGLLLGAALLLGILVFRSRR 37 (38)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred eeeehHHHHHHHHHHHHHHHHeec
Confidence 444444443332 22333444544
No 455
>2l9u_A Receptor tyrosine-protein kinase ERBB-3; transmenbrane dimer, membrane protein, EGFR; NMR {Homo sapiens}
Probab=21.02 E-value=26 Score=20.62 Aligned_cols=24 Identities=33% Similarity=0.599 Sum_probs=12.8
Q ss_pred hhhhhhHHhhhhhhhhhhhhhhcC
Q 013004 242 GVALGAALLFAVPVIGFAYWRRTR 265 (451)
Q Consensus 242 ~v~vg~~~~~~~~~i~~~~~rrrr 265 (451)
.+++|.++.+......+.+||-|+
T Consensus 11 t~i~gl~vif~~lg~tflywrgrr 34 (40)
T 2l9u_A 11 TVIAGLVVIFMMLGGTFLYWRGRR 34 (40)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCceeEEEcccc
Confidence 344455555544445566777554
Done!