Query 013006
Match_columns 451
No_of_seqs 425 out of 2091
Neff 9.4
Searched_HMMs 46136
Date Fri Mar 29 08:34:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013006.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/013006hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02824 hydrolase, alpha/beta 100.0 1.7E-33 3.7E-38 269.8 28.3 279 133-450 7-287 (294)
2 PLN02679 hydrolase, alpha/beta 100.0 1.1E-32 2.5E-37 270.9 27.1 280 136-450 63-350 (360)
3 PLN02578 hydrolase 100.0 4.8E-32 1E-36 266.1 27.2 274 137-450 69-348 (354)
4 PRK03592 haloalkane dehalogena 100.0 4.3E-31 9.2E-36 253.4 25.8 257 142-451 14-283 (295)
5 TIGR02240 PHA_depoly_arom poly 100.0 1.5E-31 3.2E-36 254.1 22.2 251 142-450 9-259 (276)
6 PLN03084 alpha/beta hydrolase 100.0 3.5E-30 7.7E-35 252.5 29.6 259 141-450 111-377 (383)
7 KOG4178 Soluble epoxide hydrol 100.0 6.5E-31 1.4E-35 242.0 22.3 270 134-451 22-314 (322)
8 PLN03087 BODYGUARD 1 domain co 100.0 7.5E-30 1.6E-34 254.9 30.8 276 138-450 179-472 (481)
9 PRK03204 haloalkane dehalogena 100.0 5.7E-30 1.2E-34 244.1 28.5 267 132-451 12-282 (286)
10 PRK00870 haloalkane dehalogena 100.0 2.2E-30 4.8E-35 249.2 24.9 253 145-450 34-294 (302)
11 PRK10349 carboxylesterase BioH 100.0 1.8E-30 3.9E-35 243.8 22.6 245 146-450 3-249 (256)
12 TIGR03343 biphenyl_bphD 2-hydr 100.0 1.4E-29 3E-34 241.0 24.8 253 144-450 19-276 (282)
13 TIGR03056 bchO_mg_che_rel puta 100.0 2.7E-29 5.8E-34 238.1 26.1 263 140-451 11-274 (278)
14 PLN02965 Probable pheophorbida 100.0 1.7E-29 3.6E-34 237.1 22.9 236 161-451 5-247 (255)
15 KOG4409 Predicted hydrolase/ac 100.0 2.7E-29 5.8E-34 231.7 23.0 270 143-451 74-358 (365)
16 PRK10673 acyl-CoA esterase; Pr 100.0 4.3E-29 9.2E-34 234.1 24.5 243 146-450 2-248 (255)
17 PRK06489 hypothetical protein; 100.0 3.2E-29 6.8E-34 246.8 24.6 275 142-450 47-350 (360)
18 TIGR03611 RutD pyrimidine util 100.0 3.5E-29 7.5E-34 233.9 20.7 250 147-450 1-251 (257)
19 PLN02385 hydrolase; alpha/beta 100.0 1.2E-28 2.6E-33 241.9 22.6 254 135-445 62-329 (349)
20 KOG1454 Predicted hydrolase/ac 100.0 3.4E-29 7.3E-34 240.4 17.1 253 157-450 56-317 (326)
21 TIGR02427 protocat_pcaD 3-oxoa 100.0 6.2E-28 1.3E-32 223.9 22.8 245 146-450 1-246 (251)
22 TIGR01738 bioH putative pimelo 100.0 5.7E-28 1.2E-32 223.5 22.3 235 160-450 5-241 (245)
23 PF12697 Abhydrolase_6: Alpha/ 100.0 3.1E-28 6.8E-33 222.1 19.7 228 162-449 1-228 (228)
24 TIGR01392 homoserO_Ac_trn homo 100.0 6.1E-28 1.3E-32 236.9 21.8 284 142-450 13-346 (351)
25 PRK08775 homoserine O-acetyltr 100.0 6.2E-28 1.3E-32 236.1 20.5 257 143-450 44-332 (343)
26 PRK07581 hypothetical protein; 100.0 5.1E-28 1.1E-32 236.6 19.5 279 142-450 23-329 (339)
27 PRK11126 2-succinyl-6-hydroxy- 100.0 1.8E-27 3.8E-32 221.4 21.4 231 159-450 2-235 (242)
28 PRK00175 metX homoserine O-ace 100.0 3.3E-27 7E-32 233.7 23.9 289 143-450 31-367 (379)
29 PLN02298 hydrolase, alpha/beta 100.0 1.9E-27 4.1E-32 231.7 21.5 258 133-448 31-304 (330)
30 PHA02857 monoglyceride lipase; 100.0 3.6E-27 7.7E-32 223.9 22.7 248 137-444 3-257 (276)
31 PRK10749 lysophospholipase L2; 100.0 5.3E-26 1.2E-30 221.2 28.6 129 137-291 33-166 (330)
32 TIGR01250 pro_imino_pep_2 prol 100.0 1.5E-26 3.3E-31 219.4 24.1 265 142-450 9-283 (288)
33 PLN02211 methyl indole-3-aceta 100.0 6.7E-27 1.5E-31 221.1 20.4 252 143-451 5-264 (273)
34 PLN02894 hydrolase, alpha/beta 99.9 9.7E-26 2.1E-30 224.2 26.0 274 138-451 83-379 (402)
35 PRK14875 acetoin dehydrogenase 99.9 9.3E-26 2E-30 223.4 25.1 247 143-450 117-364 (371)
36 TIGR01249 pro_imino_pep_1 prol 99.9 1E-25 2.2E-30 217.0 24.4 125 135-291 5-130 (306)
37 TIGR03695 menH_SHCHC 2-succiny 99.9 9.2E-26 2E-30 208.9 19.9 243 160-450 2-246 (251)
38 PLN02980 2-oxoglutarate decarb 99.9 4.5E-24 9.7E-29 242.8 26.3 257 147-450 1360-1632(1655)
39 PRK06765 homoserine O-acetyltr 99.9 7.8E-24 1.7E-28 208.2 24.3 296 143-450 39-381 (389)
40 PLN02652 hydrolase; alpha/beta 99.9 2.4E-23 5.3E-28 205.5 25.5 258 133-450 109-380 (395)
41 PRK05855 short chain dehydroge 99.9 9.1E-24 2E-28 221.6 23.2 268 137-450 5-285 (582)
42 COG2267 PldB Lysophospholipase 99.9 4.6E-23 1E-27 196.0 21.0 255 133-444 8-278 (298)
43 KOG2382 Predicted alpha/beta h 99.9 9.9E-23 2.1E-27 188.2 19.6 247 158-450 51-306 (315)
44 KOG1455 Lysophospholipase [Lip 99.9 1.1E-22 2.5E-27 184.6 18.7 257 133-448 26-299 (313)
45 PLN02511 hydrolase 99.9 6.2E-23 1.3E-27 203.3 17.5 251 136-445 73-347 (388)
46 KOG2984 Predicted hydrolase [G 99.9 1.2E-23 2.7E-28 178.2 9.8 239 142-450 28-269 (277)
47 PLN02872 triacylglycerol lipas 99.9 6.1E-22 1.3E-26 194.8 21.1 295 131-451 41-383 (395)
48 PF00561 Abhydrolase_1: alpha/ 99.9 1.1E-22 2.3E-27 186.9 11.3 218 186-450 1-228 (230)
49 TIGR01607 PST-A Plasmodium sub 99.9 1.5E-21 3.3E-26 189.5 20.0 257 140-450 3-326 (332)
50 PRK10985 putative hydrolase; P 99.9 2E-20 4.2E-25 181.6 21.6 253 137-442 34-300 (324)
51 PRK05077 frsA fermentation/res 99.9 8.5E-20 1.8E-24 181.8 24.6 232 134-450 168-405 (414)
52 COG1647 Esterase/lipase [Gener 99.9 4.5E-20 9.7E-25 159.8 18.8 213 160-450 16-237 (243)
53 PRK13604 luxD acyl transferase 99.9 8.6E-20 1.9E-24 170.7 21.9 225 136-439 11-246 (307)
54 TIGR01838 PHA_synth_I poly(R)- 99.8 5.1E-19 1.1E-23 178.9 25.7 252 158-444 187-462 (532)
55 TIGR03100 hydr1_PEP hydrolase, 99.8 1.1E-18 2.4E-23 165.2 25.2 240 143-450 10-268 (274)
56 PRK10566 esterase; Provisional 99.8 8.6E-19 1.9E-23 163.7 18.7 123 146-288 14-139 (249)
57 COG0596 MhpC Predicted hydrola 99.8 1.3E-18 2.9E-23 161.2 19.7 259 143-450 8-275 (282)
58 TIGR01836 PHA_synth_III_C poly 99.8 4.6E-18 1E-22 166.9 22.6 116 142-291 45-171 (350)
59 KOG1552 Predicted alpha/beta h 99.8 2.4E-18 5.1E-23 153.7 16.6 180 158-446 59-242 (258)
60 PRK07868 acyl-CoA synthetase; 99.8 1.2E-17 2.6E-22 184.4 22.6 250 158-440 66-341 (994)
61 PRK11071 esterase YqiA; Provis 99.8 2.5E-18 5.3E-23 153.3 13.9 86 160-290 2-92 (190)
62 COG2021 MET2 Homoserine acetyl 99.8 8.3E-17 1.8E-21 151.0 22.1 287 143-450 34-361 (368)
63 PF12695 Abhydrolase_5: Alpha/ 99.8 1.4E-17 3.1E-22 141.8 13.5 143 161-437 1-145 (145)
64 KOG2564 Predicted acetyltransf 99.7 6E-17 1.3E-21 144.7 13.4 114 146-290 61-181 (343)
65 TIGR03101 hydr2_PEP hydrolase, 99.7 4.6E-16 9.9E-21 144.9 14.9 101 159-290 25-133 (266)
66 PF06342 DUF1057: Alpha/beta h 99.7 5.8E-15 1.3E-19 133.7 20.9 239 145-450 21-292 (297)
67 KOG4391 Predicted alpha/beta h 99.7 8.9E-16 1.9E-20 132.2 13.6 198 137-438 57-264 (300)
68 PRK11460 putative hydrolase; P 99.7 1.8E-15 3.9E-20 139.4 16.6 182 157-448 14-203 (232)
69 KOG2624 Triglyceride lipase-ch 99.7 2E-15 4.2E-20 146.8 17.4 305 130-450 44-391 (403)
70 TIGR02821 fghA_ester_D S-formy 99.7 8.4E-15 1.8E-19 138.8 19.3 130 142-290 22-172 (275)
71 PF03096 Ndr: Ndr family; Int 99.6 4.1E-14 8.9E-19 129.9 20.3 251 145-450 9-272 (283)
72 KOG2931 Differentiation-relate 99.6 1.1E-13 2.4E-18 125.1 22.3 253 145-450 32-299 (326)
73 PLN02442 S-formylglutathione h 99.6 3.8E-14 8.2E-19 134.6 20.1 133 143-290 28-177 (283)
74 KOG4667 Predicted esterase [Li 99.6 2.3E-14 4.9E-19 123.6 14.1 204 158-442 32-244 (269)
75 COG0429 Predicted hydrolase of 99.6 4.6E-14 1E-18 130.5 15.6 52 390-441 267-319 (345)
76 COG3208 GrsT Predicted thioest 99.6 6.5E-14 1.4E-18 124.6 15.5 219 158-450 6-229 (244)
77 TIGR01839 PHA_synth_II poly(R) 99.6 5.3E-13 1.2E-17 133.8 21.6 257 143-440 199-484 (560)
78 COG1506 DAP2 Dipeptidyl aminop 99.5 1.3E-13 2.8E-18 144.6 17.3 220 134-440 365-598 (620)
79 KOG1838 Alpha/beta hydrolase [ 99.5 7.4E-13 1.6E-17 127.0 20.6 259 134-442 93-368 (409)
80 TIGR03230 lipo_lipase lipoprot 99.5 8.5E-14 1.8E-18 137.2 13.2 105 157-292 39-155 (442)
81 PLN00021 chlorophyllase 99.5 2.6E-13 5.6E-18 129.9 14.7 102 158-290 51-165 (313)
82 COG0400 Predicted esterase [Ge 99.5 4.6E-13 9.9E-18 119.3 13.6 183 153-448 12-200 (207)
83 TIGR01840 esterase_phb esteras 99.5 9.2E-13 2E-17 119.9 15.8 113 158-291 12-130 (212)
84 TIGR01849 PHB_depoly_PhaZ poly 99.5 3.7E-12 8E-17 124.4 19.8 274 134-441 75-387 (406)
85 PF10230 DUF2305: Uncharacteri 99.5 1.3E-11 2.8E-16 115.8 22.2 243 159-437 2-264 (266)
86 TIGR00976 /NonD putative hydro 99.5 1.5E-12 3.3E-17 135.2 17.4 120 140-291 2-132 (550)
87 PF02230 Abhydrolase_2: Phosph 99.4 1.3E-12 2.9E-17 119.2 12.8 186 156-447 11-209 (216)
88 COG4757 Predicted alpha/beta h 99.4 2.5E-12 5.4E-17 112.4 13.6 254 143-450 14-276 (281)
89 PF00326 Peptidase_S9: Prolyl 99.4 7.8E-13 1.7E-17 120.4 11.2 178 175-439 3-190 (213)
90 PF05448 AXE1: Acetyl xylan es 99.4 1.1E-11 2.5E-16 118.8 19.3 244 134-442 56-308 (320)
91 cd00707 Pancreat_lipase_like P 99.4 5.1E-13 1.1E-17 126.1 9.8 115 144-292 24-148 (275)
92 KOG2565 Predicted hydrolases o 99.4 1.3E-11 2.9E-16 114.8 18.0 119 142-290 131-263 (469)
93 PF06500 DUF1100: Alpha/beta h 99.4 1.7E-11 3.7E-16 118.6 17.7 221 134-435 165-390 (411)
94 PF06821 Ser_hydrolase: Serine 99.4 7.5E-12 1.6E-16 109.0 13.1 154 162-441 1-157 (171)
95 PF01738 DLH: Dienelactone hyd 99.4 5.6E-12 1.2E-16 115.2 12.2 173 158-444 13-196 (218)
96 PF00975 Thioesterase: Thioest 99.4 2.7E-11 5.7E-16 111.6 15.9 99 160-291 1-104 (229)
97 TIGR03502 lipase_Pla1_cef extr 99.3 4.2E-11 9.2E-16 125.3 18.7 131 138-276 421-575 (792)
98 PF12146 Hydrolase_4: Putative 99.3 1.1E-11 2.4E-16 93.1 8.3 78 144-251 1-79 (79)
99 PRK10162 acetyl esterase; Prov 99.3 1.7E-10 3.8E-15 111.5 17.5 99 158-290 80-194 (318)
100 PF08538 DUF1749: Protein of u 99.2 1.3E-10 2.8E-15 108.1 13.9 226 158-444 32-288 (303)
101 PF02273 Acyl_transf_2: Acyl t 99.2 5.2E-10 1.1E-14 98.9 16.7 229 137-444 5-243 (294)
102 PRK10115 protease 2; Provision 99.2 5.1E-10 1.1E-14 118.5 20.0 135 134-291 416-559 (686)
103 COG3458 Acetyl esterase (deace 99.2 2.7E-10 5.9E-15 102.1 14.5 231 136-439 58-302 (321)
104 COG0412 Dienelactone hydrolase 99.2 5.2E-10 1.1E-14 102.9 16.8 167 160-441 28-206 (236)
105 COG3243 PhaC Poly(3-hydroxyalk 99.2 3.7E-10 8.1E-15 107.8 14.8 253 158-442 106-375 (445)
106 COG2945 Predicted hydrolase of 99.2 7.6E-10 1.7E-14 94.5 14.9 161 157-442 26-193 (210)
107 PRK10252 entF enterobactin syn 99.2 2.3E-10 4.9E-15 131.4 14.7 100 158-290 1067-1170(1296)
108 PF05728 UPF0227: Uncharacteri 99.2 1.3E-09 2.9E-14 96.0 15.1 84 162-290 2-90 (187)
109 PTZ00472 serine carboxypeptida 99.1 3.9E-08 8.4E-13 99.4 23.3 127 135-290 48-215 (462)
110 PF02129 Peptidase_S15: X-Pro 99.1 3.8E-09 8.3E-14 99.9 14.9 117 143-291 1-136 (272)
111 PF10503 Esterase_phd: Esteras 99.0 1.4E-08 3.1E-13 91.6 16.3 112 159-292 16-133 (220)
112 PF03959 FSH1: Serine hydrolas 99.0 2.1E-09 4.5E-14 97.6 9.6 187 158-443 3-207 (212)
113 COG3545 Predicted esterase of 99.0 2.6E-08 5.7E-13 84.2 15.3 119 237-440 41-159 (181)
114 PF07819 PGAP1: PGAP1-like pro 98.9 7E-09 1.5E-13 94.7 11.1 103 158-290 3-122 (225)
115 KOG3975 Uncharacterized conser 98.9 8.1E-08 1.8E-12 85.3 17.0 257 158-450 28-296 (301)
116 PF07859 Abhydrolase_3: alpha/ 98.9 1.1E-08 2.4E-13 92.8 11.9 95 162-290 1-109 (211)
117 COG3571 Predicted hydrolase of 98.9 1.5E-07 3.4E-12 77.9 16.1 105 159-289 14-122 (213)
118 PF09752 DUF2048: Uncharacteri 98.9 9.5E-08 2.1E-12 90.5 15.9 238 158-450 91-342 (348)
119 PRK05371 x-prolyl-dipeptidyl a 98.9 5.2E-08 1.1E-12 104.1 16.0 78 182-291 276-373 (767)
120 PF12740 Chlorophyllase2: Chlo 98.8 5.7E-08 1.2E-12 88.9 13.6 102 158-290 16-130 (259)
121 KOG2551 Phospholipase/carboxyh 98.7 6.1E-07 1.3E-11 78.8 16.0 49 394-443 160-208 (230)
122 COG3319 Thioesterase domains o 98.7 1.1E-07 2.4E-12 87.6 11.9 100 160-292 1-104 (257)
123 PF06057 VirJ: Bacterial virul 98.7 9.6E-08 2.1E-12 82.7 9.4 96 160-291 3-107 (192)
124 KOG4627 Kynurenine formamidase 98.7 2E-07 4.4E-12 80.4 10.3 192 146-442 55-252 (270)
125 PF11339 DUF3141: Protein of u 98.7 3.7E-06 7.9E-11 82.8 20.0 98 157-290 66-174 (581)
126 PF03403 PAF-AH_p_II: Platelet 98.6 1.8E-07 3.9E-12 92.1 10.6 132 158-290 99-261 (379)
127 PLN02733 phosphatidylcholine-s 98.6 1.2E-07 2.6E-12 94.5 9.3 92 170-290 105-200 (440)
128 KOG1515 Arylacetamide deacetyl 98.6 2.7E-06 5.8E-11 81.6 17.4 120 137-290 64-206 (336)
129 COG0657 Aes Esterase/lipase [L 98.6 3.7E-06 8.1E-11 81.2 18.6 100 158-291 78-191 (312)
130 PF06028 DUF915: Alpha/beta hy 98.6 1.1E-06 2.4E-11 81.3 13.9 118 158-290 10-142 (255)
131 COG4188 Predicted dienelactone 98.6 1.5E-07 3.2E-12 89.5 8.0 221 158-445 70-302 (365)
132 COG4099 Predicted peptidase [G 98.6 9.4E-07 2E-11 80.6 12.3 132 136-290 163-303 (387)
133 KOG2100 Dipeptidyl aminopeptid 98.6 9.1E-07 2E-11 94.4 14.3 206 143-442 506-731 (755)
134 PF12715 Abhydrolase_7: Abhydr 98.5 2.9E-07 6.3E-12 88.1 9.1 137 141-290 95-259 (390)
135 KOG1553 Predicted alpha/beta h 98.5 5.1E-07 1.1E-11 83.8 9.4 99 160-290 244-344 (517)
136 KOG2112 Lysophospholipase [Lip 98.5 9.6E-07 2.1E-11 77.1 10.6 117 160-289 4-126 (206)
137 PF01674 Lipase_2: Lipase (cla 98.5 2.9E-07 6.2E-12 83.0 7.1 90 160-277 2-96 (219)
138 PF05677 DUF818: Chlamydia CHL 98.5 3E-05 6.5E-10 72.9 20.0 112 143-288 120-251 (365)
139 KOG3043 Predicted hydrolase re 98.5 1.1E-06 2.4E-11 77.2 10.0 160 160-439 40-211 (242)
140 PF00450 Peptidase_S10: Serine 98.5 1.5E-05 3.3E-10 80.2 19.8 130 134-291 11-181 (415)
141 PRK04940 hypothetical protein; 98.5 1.7E-05 3.6E-10 68.7 16.9 33 256-291 60-92 (180)
142 PF08840 BAAT_C: BAAT / Acyl-C 98.4 2.1E-07 4.6E-12 84.4 4.9 47 245-292 8-57 (213)
143 PF00151 Lipase: Lipase; Inte 98.4 1.9E-07 4.2E-12 90.0 4.9 106 156-292 68-188 (331)
144 KOG2281 Dipeptidyl aminopeptid 98.4 2.9E-06 6.3E-11 84.9 12.9 130 141-293 620-764 (867)
145 PF03583 LIP: Secretory lipase 98.4 6.5E-06 1.4E-10 78.3 13.1 44 396-439 218-266 (290)
146 smart00824 PKS_TE Thioesterase 98.3 5.9E-06 1.3E-10 74.2 11.6 95 164-291 2-102 (212)
147 PF05990 DUF900: Alpha/beta hy 98.3 5E-06 1.1E-10 76.4 11.0 107 158-290 17-136 (233)
148 PF07224 Chlorophyllase: Chlor 98.3 1.9E-06 4.1E-11 77.5 7.3 103 158-291 45-157 (307)
149 COG2936 Predicted acyl esteras 98.2 5.4E-06 1.2E-10 83.6 10.0 129 133-291 18-159 (563)
150 PF04301 DUF452: Protein of un 98.2 7.2E-05 1.6E-09 66.8 15.9 80 159-292 11-91 (213)
151 COG1075 LipA Predicted acetylt 98.1 9.3E-06 2E-10 78.9 8.7 99 159-290 59-163 (336)
152 COG3509 LpqC Poly(3-hydroxybut 98.0 7.5E-05 1.6E-09 68.8 11.2 129 143-291 43-179 (312)
153 KOG4840 Predicted hydrolases o 98.0 8.3E-05 1.8E-09 65.3 10.3 99 159-291 36-144 (299)
154 KOG3101 Esterase D [General fu 97.9 9.3E-05 2E-09 64.5 9.9 117 158-291 43-176 (283)
155 PF05057 DUF676: Putative seri 97.9 2.5E-05 5.5E-10 71.1 6.3 89 159-275 4-97 (217)
156 KOG3253 Predicted alpha/beta h 97.9 0.00016 3.5E-09 72.3 12.1 47 395-441 302-349 (784)
157 KOG3847 Phospholipase A2 (plat 97.8 0.00029 6.4E-09 65.1 12.2 124 158-289 117-273 (399)
158 COG4782 Uncharacterized protei 97.8 0.00014 2.9E-09 69.1 9.2 107 158-290 115-233 (377)
159 COG4814 Uncharacterized protei 97.8 0.00013 2.9E-09 65.5 8.5 114 159-290 45-175 (288)
160 PRK10439 enterobactin/ferric e 97.7 0.0009 2E-08 66.8 14.5 51 240-290 267-322 (411)
161 PF05577 Peptidase_S28: Serine 97.7 0.00042 9E-09 70.2 12.4 108 159-291 29-148 (434)
162 PF05705 DUF829: Eukaryotic pr 97.6 0.0077 1.7E-07 55.7 19.2 56 395-450 176-236 (240)
163 PLN03016 sinapoylglucose-malat 97.6 0.024 5.1E-07 57.1 23.1 132 134-290 37-209 (433)
164 PF00756 Esterase: Putative es 97.6 0.00018 3.9E-09 67.0 7.3 51 240-290 96-149 (251)
165 KOG3724 Negative regulator of 97.5 0.00075 1.6E-08 69.7 10.9 100 157-290 87-219 (973)
166 PLN02606 palmitoyl-protein thi 97.5 0.0026 5.7E-08 59.6 13.7 97 159-290 26-131 (306)
167 PLN02209 serine carboxypeptida 97.5 0.039 8.4E-07 55.6 22.8 132 134-290 39-211 (437)
168 COG3150 Predicted esterase [Ge 97.5 0.00046 1E-08 58.1 7.1 87 162-290 2-90 (191)
169 PF02450 LCAT: Lecithin:choles 97.4 0.00096 2.1E-08 66.3 10.6 51 240-290 100-159 (389)
170 PF02089 Palm_thioest: Palmito 97.4 0.0016 3.5E-08 60.5 10.3 103 158-290 4-115 (279)
171 KOG2541 Palmitoyl protein thio 97.3 0.0069 1.5E-07 55.2 13.5 95 160-290 24-127 (296)
172 cd00312 Esterase_lipase Estera 97.3 0.0016 3.4E-08 67.2 10.8 53 240-292 158-214 (493)
173 PF10142 PhoPQ_related: PhoPQ- 97.3 0.0033 7.1E-08 61.2 12.0 47 394-440 259-306 (367)
174 PF08386 Abhydrolase_4: TAP-li 97.2 0.00059 1.3E-08 54.1 5.2 44 397-440 34-77 (103)
175 COG1505 Serine proteases of th 97.2 0.0014 3E-08 66.0 8.6 136 131-290 391-534 (648)
176 KOG1282 Serine carboxypeptidas 97.2 0.18 3.9E-06 50.6 23.2 132 135-291 45-213 (454)
177 KOG1551 Uncharacterized conser 97.2 0.0052 1.1E-07 55.7 10.8 50 400-450 309-359 (371)
178 KOG2183 Prolylcarboxypeptidase 97.1 0.0019 4.1E-08 62.2 8.5 110 160-290 81-201 (492)
179 PF12048 DUF3530: Protein of u 97.1 0.14 3.1E-06 49.2 20.9 45 246-290 183-228 (310)
180 PLN02633 palmitoyl protein thi 96.9 0.023 5.1E-07 53.4 13.5 98 159-290 25-130 (314)
181 PF10340 DUF2424: Protein of u 96.9 0.0075 1.6E-07 58.6 9.9 104 158-291 121-235 (374)
182 PF11144 DUF2920: Protein of u 96.8 0.0079 1.7E-07 58.6 9.9 35 256-290 184-218 (403)
183 COG4553 DepA Poly-beta-hydroxy 96.7 0.1 2.2E-06 48.3 15.6 102 159-292 103-210 (415)
184 COG1073 Hydrolases of the alph 96.7 0.055 1.2E-06 51.0 14.6 50 394-443 228-280 (299)
185 COG2382 Fes Enterochelin ester 96.6 0.05 1.1E-06 50.9 12.7 36 256-291 177-212 (299)
186 PF04083 Abhydro_lipase: Parti 96.5 0.0048 1E-07 43.8 4.4 45 131-175 9-59 (63)
187 cd00741 Lipase Lipase. Lipase 96.5 0.0062 1.3E-07 52.0 6.0 52 239-290 7-66 (153)
188 COG2819 Predicted hydrolase of 96.5 0.051 1.1E-06 50.0 11.9 51 240-290 118-171 (264)
189 COG2272 PnbA Carboxylesterase 96.4 0.041 8.9E-07 54.8 11.9 129 143-291 78-217 (491)
190 KOG2237 Predicted serine prote 96.4 0.065 1.4E-06 54.8 13.3 128 133-290 440-583 (712)
191 COG0627 Predicted esterase [Ge 96.3 0.015 3.4E-07 55.6 8.2 35 257-291 153-187 (316)
192 PF06259 Abhydrolase_8: Alpha/ 96.3 0.094 2E-06 45.7 12.2 53 239-291 87-144 (177)
193 PLN02213 sinapoylglucose-malat 96.3 0.28 6.1E-06 47.4 16.6 53 397-450 233-310 (319)
194 COG1770 PtrB Protease II [Amin 96.2 0.09 2E-06 54.1 13.3 54 237-290 506-561 (682)
195 COG2939 Carboxypeptidase C (ca 96.2 0.038 8.3E-07 55.1 10.2 122 147-290 88-235 (498)
196 PF01764 Lipase_3: Lipase (cla 96.1 0.0098 2.1E-07 49.8 5.3 38 239-276 47-84 (140)
197 PLN02517 phosphatidylcholine-s 96.0 0.016 3.5E-07 59.1 6.8 51 240-290 193-262 (642)
198 PF05576 Peptidase_S37: PS-10 95.9 0.035 7.7E-07 54.0 8.3 102 158-289 62-167 (448)
199 PF06441 EHN: Epoxide hydrolas 95.7 0.018 3.9E-07 46.1 4.7 42 138-179 71-112 (112)
200 KOG1202 Animal-type fatty acid 95.7 0.15 3.2E-06 55.7 12.3 96 157-291 2121-2219(2376)
201 PF11187 DUF2974: Protein of u 95.6 0.031 6.7E-07 50.9 6.3 49 242-291 71-123 (224)
202 KOG3967 Uncharacterized conser 95.6 0.13 2.9E-06 45.3 9.7 43 248-290 182-226 (297)
203 PF00135 COesterase: Carboxyle 95.5 0.066 1.4E-06 55.6 9.4 121 143-291 107-245 (535)
204 KOG2182 Hydrolytic enzymes of 95.4 0.085 1.9E-06 52.5 8.9 109 158-290 85-206 (514)
205 COG3946 VirJ Type IV secretory 95.0 0.1 2.2E-06 50.6 7.9 84 160-279 261-349 (456)
206 KOG2369 Lecithin:cholesterol a 94.9 0.043 9.3E-07 54.2 5.4 50 240-289 162-223 (473)
207 cd00519 Lipase_3 Lipase (class 94.8 0.04 8.6E-07 50.5 4.7 27 250-276 122-148 (229)
208 PLN02162 triacylglycerol lipas 94.4 0.09 1.9E-06 52.3 6.2 38 238-275 260-297 (475)
209 PF07519 Tannase: Tannase and 94.3 0.25 5.4E-06 50.4 9.4 128 146-292 16-151 (474)
210 PLN00413 triacylglycerol lipas 93.9 0.13 2.9E-06 51.2 6.4 38 238-275 266-303 (479)
211 PLN02454 triacylglycerol lipas 93.9 0.082 1.8E-06 52.1 4.9 36 241-276 211-248 (414)
212 PLN02571 triacylglycerol lipas 93.9 0.076 1.6E-06 52.4 4.6 37 240-276 208-246 (413)
213 PF11288 DUF3089: Protein of u 93.6 0.13 2.9E-06 45.8 5.3 41 237-277 75-116 (207)
214 COG4287 PqaA PhoPQ-activated p 93.3 0.11 2.3E-06 49.7 4.3 46 394-439 326-372 (507)
215 PLN02408 phospholipase A1 93.1 0.13 2.8E-06 50.0 4.7 37 240-276 182-220 (365)
216 COG2830 Uncharacterized protei 93.0 1 2.2E-05 38.0 9.2 78 160-291 12-90 (214)
217 COG4947 Uncharacterized protei 92.9 0.13 2.9E-06 43.7 3.8 48 243-290 88-135 (227)
218 PLN02934 triacylglycerol lipas 92.4 0.18 4E-06 50.7 4.8 38 238-275 303-340 (515)
219 PF01083 Cutinase: Cutinase; 92.3 0.22 4.8E-06 43.7 4.7 53 238-290 59-121 (179)
220 PLN02324 triacylglycerol lipas 92.2 0.19 4.2E-06 49.5 4.6 37 240-276 197-235 (415)
221 PF07082 DUF1350: Protein of u 91.9 1.6 3.4E-05 40.0 9.8 34 257-290 91-124 (250)
222 PLN02802 triacylglycerol lipas 91.6 0.23 5.1E-06 50.0 4.5 37 240-276 312-350 (509)
223 PLN02310 triacylglycerol lipas 91.4 0.25 5.5E-06 48.6 4.5 37 240-276 189-229 (405)
224 KOG4372 Predicted alpha/beta h 91.2 0.32 6.9E-06 47.4 4.8 89 159-275 80-169 (405)
225 PF05277 DUF726: Protein of un 91.1 0.4 8.7E-06 46.4 5.4 37 254-290 218-259 (345)
226 PLN02753 triacylglycerol lipas 91.0 0.28 6.2E-06 49.6 4.5 36 240-275 291-331 (531)
227 PLN02719 triacylglycerol lipas 90.2 0.37 8.1E-06 48.6 4.4 37 240-276 277-318 (518)
228 PLN03037 lipase class 3 family 90.1 0.38 8.2E-06 48.6 4.4 37 240-276 298-338 (525)
229 PLN02761 lipase class 3 family 90.1 0.4 8.6E-06 48.5 4.5 36 240-275 272-313 (527)
230 KOG1516 Carboxylesterase and r 88.5 3 6.4E-05 43.6 10.0 56 237-292 171-233 (545)
231 PLN02847 triacylglycerol lipas 88.0 0.76 1.7E-05 47.2 4.9 27 250-276 245-271 (633)
232 KOG4569 Predicted lipase [Lipi 87.1 0.77 1.7E-05 44.7 4.3 37 240-276 155-191 (336)
233 KOG1283 Serine carboxypeptidas 75.8 12 0.00026 35.6 7.3 104 158-289 30-164 (414)
234 KOG4388 Hormone-sensitive lipa 75.5 26 0.00057 36.1 10.0 43 256-298 469-515 (880)
235 COG5153 CVT17 Putative lipase 73.6 7 0.00015 36.4 5.2 44 244-289 264-307 (425)
236 KOG4540 Putative lipase essent 73.6 7 0.00015 36.4 5.2 44 244-289 264-307 (425)
237 PRK12467 peptide synthase; Pro 64.2 44 0.00095 44.0 11.3 97 160-289 3693-3793(3956)
238 KOG2521 Uncharacterized conser 64.0 1E+02 0.0022 30.1 11.2 101 160-290 39-151 (350)
239 KOG2029 Uncharacterized conser 63.5 12 0.00026 38.6 4.9 53 238-290 505-571 (697)
240 PF08237 PE-PPE: PE-PPE domain 63.4 28 0.0006 31.7 7.0 40 238-277 28-69 (225)
241 KOG2385 Uncharacterized conser 62.0 18 0.0004 36.6 5.8 39 253-291 444-487 (633)
242 PF06850 PHB_depo_C: PHB de-po 58.7 16 0.00034 32.3 4.2 48 394-441 130-183 (202)
243 PF09949 DUF2183: Uncharacteri 54.6 50 0.0011 25.8 6.1 44 243-286 52-97 (100)
244 cd01714 ETF_beta The electron 53.6 42 0.0009 30.0 6.3 50 237-287 91-145 (202)
245 smart00827 PKS_AT Acyl transfe 53.3 14 0.0003 35.1 3.4 30 247-276 73-102 (298)
246 PF00698 Acyl_transf_1: Acyl t 52.6 8.5 0.00018 37.1 1.9 31 246-276 74-104 (318)
247 TIGR03131 malonate_mdcH malona 50.2 16 0.00036 34.6 3.4 31 246-276 66-96 (295)
248 PF07519 Tannase: Tannase and 49.1 18 0.0004 37.0 3.7 51 390-440 346-408 (474)
249 COG1448 TyrB Aspartate/tyrosin 47.8 84 0.0018 30.9 7.6 87 159-290 171-264 (396)
250 TIGR00128 fabD malonyl CoA-acy 46.0 20 0.00043 33.8 3.2 30 248-277 74-104 (290)
251 TIGR03712 acc_sec_asp2 accesso 42.4 4E+02 0.0086 27.4 16.7 107 148-291 280-390 (511)
252 cd07198 Patatin Patatin-like p 41.2 35 0.00076 29.4 3.8 33 246-278 16-48 (172)
253 cd07225 Pat_PNPLA6_PNPLA7 Pata 40.1 35 0.00075 32.7 3.8 33 245-277 32-64 (306)
254 PRK10279 hypothetical protein; 39.5 33 0.00071 32.8 3.5 33 246-278 23-55 (300)
255 COG3887 Predicted signaling pr 39.3 55 0.0012 34.0 5.1 49 239-290 323-377 (655)
256 PF11713 Peptidase_C80: Peptid 35.5 32 0.00069 29.4 2.5 32 237-268 77-116 (157)
257 cd07207 Pat_ExoU_VipD_like Exo 35.0 48 0.001 29.0 3.7 29 249-277 20-48 (194)
258 PRK02399 hypothetical protein; 33.7 2.4E+02 0.0053 28.1 8.5 120 160-287 4-128 (406)
259 cd07210 Pat_hypo_W_succinogene 33.7 56 0.0012 29.6 4.0 30 248-277 20-49 (221)
260 cd07227 Pat_Fungal_NTE1 Fungal 33.2 49 0.0011 31.0 3.6 32 246-277 28-59 (269)
261 COG1752 RssA Predicted esteras 32.6 49 0.0011 31.6 3.6 33 245-277 28-60 (306)
262 TIGR02816 pfaB_fam PfaB family 32.0 43 0.00093 34.8 3.2 31 247-277 255-286 (538)
263 PF00448 SRP54: SRP54-type pro 31.5 3.1E+02 0.0067 24.2 8.3 73 177-288 74-149 (196)
264 PF05576 Peptidase_S37: PS-10 30.9 32 0.00069 34.2 1.9 47 393-441 347-393 (448)
265 PF06792 UPF0261: Uncharacteri 30.8 2.5E+02 0.0055 28.0 8.1 117 160-287 2-126 (403)
266 COG1073 Hydrolases of the alph 30.5 4.7 0.0001 37.6 -3.9 16 159-174 49-64 (299)
267 COG1576 Uncharacterized conser 29.4 1.6E+02 0.0035 25.0 5.6 57 177-273 59-115 (155)
268 PRK14974 cell division protein 28.5 3.1E+02 0.0067 26.7 8.3 67 183-288 220-288 (336)
269 cd07209 Pat_hypo_Ecoli_Z1214_l 26.9 76 0.0017 28.5 3.7 32 247-278 17-48 (215)
270 PRK06731 flhF flagellar biosyn 26.7 5.4E+02 0.012 24.1 9.5 75 174-287 141-219 (270)
271 PF07380 Pneumo_M2: Pneumoviru 26.1 1.2E+02 0.0026 22.3 3.6 20 237-256 60-79 (89)
272 cd07228 Pat_NTE_like_bacteria 25.8 92 0.002 26.8 3.9 30 249-278 21-50 (175)
273 TIGR00064 ftsY signal recognit 23.9 4.9E+02 0.011 24.3 8.6 24 176-199 145-168 (272)
274 COG3657 Uncharacterized protei 23.2 1.1E+02 0.0023 23.6 3.1 35 130-169 46-80 (100)
275 PF08484 Methyltransf_14: C-me 23.0 2.4E+02 0.0051 24.1 5.7 53 238-290 49-103 (160)
276 cd07230 Pat_TGL4-5_like Triacy 22.7 50 0.0011 33.3 1.7 37 246-282 91-127 (421)
277 PF10605 3HBOH: 3HB-oligomer h 22.7 87 0.0019 32.8 3.4 35 258-292 287-322 (690)
278 cd07205 Pat_PNPLA6_PNPLA7_NTE1 22.4 1.2E+02 0.0026 26.0 3.9 29 249-277 21-49 (175)
279 COG3933 Transcriptional antite 22.3 4.5E+02 0.0097 26.6 8.0 75 160-275 110-184 (470)
280 KOG0781 Signal recognition par 22.3 2E+02 0.0044 29.3 5.7 87 163-288 442-539 (587)
281 PF03610 EIIA-man: PTS system 21.4 4.1E+02 0.0089 20.9 8.3 74 161-276 2-77 (116)
282 PF14253 AbiH: Bacteriophage a 21.3 94 0.002 28.8 3.3 23 248-270 226-249 (270)
283 PF10081 Abhydrolase_9: Alpha/ 20.7 1.4E+02 0.0031 28.1 4.1 51 241-291 91-147 (289)
284 cd07212 Pat_PNPLA9 Patatin-lik 20.6 1.4E+02 0.0031 28.6 4.4 19 259-277 35-53 (312)
285 PF02590 SPOUT_MTase: Predicte 20.4 1.8E+02 0.0039 24.8 4.4 69 177-290 59-127 (155)
286 PF09994 DUF2235: Uncharacteri 20.4 1.7E+02 0.0036 27.6 4.7 39 238-276 72-112 (277)
287 PF05577 Peptidase_S28: Serine 20.2 65 0.0014 32.5 2.0 40 398-440 377-416 (434)
288 cd07208 Pat_hypo_Ecoli_yjju_li 20.0 1.3E+02 0.0028 27.9 3.9 32 249-280 19-51 (266)
No 1
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=1.7e-33 Score=269.81 Aligned_cols=279 Identities=25% Similarity=0.481 Sum_probs=185.6
Q ss_pred CCccceeeecCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCC
Q 013006 133 PITSCFWEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEG 212 (451)
Q Consensus 133 ~~~~~~~~~~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~ 212 (451)
+++.+++++ +|.+++|...|+ ++++|||+||+++++..|..+++.|++.++|+++|+||||.|+.+....
T Consensus 7 ~~~~~~~~~-~~~~i~y~~~G~---~~~~vlllHG~~~~~~~w~~~~~~L~~~~~vi~~DlpG~G~S~~~~~~~------ 76 (294)
T PLN02824 7 QVETRTWRW-KGYNIRYQRAGT---SGPALVLVHGFGGNADHWRKNTPVLAKSHRVYAIDLLGYGYSDKPNPRS------ 76 (294)
T ss_pred CCCCceEEE-cCeEEEEEEcCC---CCCeEEEECCCCCChhHHHHHHHHHHhCCeEEEEcCCCCCCCCCCcccc------
Confidence 466677776 589999999985 3589999999999999999999999988999999999999997543110
Q ss_pred CchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCC
Q 013006 213 DSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPF 292 (451)
Q Consensus 213 ~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~ 292 (451)
......|+++++++|+.+++++++.++++||||||||++++.+|.++|++|+++|++++.+.
T Consensus 77 ------------------~~~~~~~~~~~~a~~l~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~ 138 (294)
T PLN02824 77 ------------------APPNSFYTFETWGEQLNDFCSDVVGDPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLR 138 (294)
T ss_pred ------------------ccccccCCHHHHHHHHHHHHHHhcCCCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCcc
Confidence 00001289999999999999999999999999999999999999999999999999998542
Q ss_pred CCCCCC-CCC-chHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHH
Q 013006 293 WGFSPN-PIR-SPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAA 370 (451)
Q Consensus 293 ~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (451)
...... +.. .+....+..+... ......++........+...+...+.......+.....+......+...
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (294)
T PLN02824 139 GLHIKKQPWLGRPFIKAFQNLLRE-------TAVGKAFFKSVATPETVKNILCQCYHDDSAVTDELVEAILRPGLEPGAV 211 (294)
T ss_pred cccccccchhhhHHHHHHHHHHhc-------hhHHHHHHHhhcCHHHHHHHHHHhccChhhccHHHHHHHHhccCCchHH
Confidence 110000 000 0000000000000 0000111111222222333333333332222223333332222222222
Q ss_pred HHHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 371 ASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
..+...+.. ... ......+.++++|+|+|+|++|.+++.+.++.+.+..+++++++++++||++++|+|++|++.|
T Consensus 212 ~~~~~~~~~-~~~---~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i 287 (294)
T PLN02824 212 DVFLDFISY-SGG---PLPEELLPAVKCPVLIAWGEKDPWEPVELGRAYANFDAVEDFIVLPGVGHCPQDEAPELVNPLI 287 (294)
T ss_pred HHHHHHhcc-ccc---cchHHHHhhcCCCeEEEEecCCCCCChHHHHHHHhcCCccceEEeCCCCCChhhhCHHHHHHHH
Confidence 222222211 111 1122446788999999999999999999999998888889999999999999999999999876
No 2
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=1.1e-32 Score=270.88 Aligned_cols=280 Identities=25% Similarity=0.501 Sum_probs=179.8
Q ss_pred cceeeecCCeEEEEeecCCC--CCCCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 013006 136 SCFWEWKPKFNVHYEKAGCE--NVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGD 213 (451)
Q Consensus 136 ~~~~~~~~g~~l~y~~~g~~--~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~ 213 (451)
..+|.+.+..+++|.+.|++ .+.+|+|||+||++.+...|..++..|+++|+|+++|+||||.|+.+...
T Consensus 63 ~~~~~~~g~~~i~Y~~~G~g~~~~~gp~lvllHG~~~~~~~w~~~~~~L~~~~~via~Dl~G~G~S~~~~~~-------- 134 (360)
T PLN02679 63 CKKWKWKGEYSINYLVKGSPEVTSSGPPVLLVHGFGASIPHWRRNIGVLAKNYTVYAIDLLGFGASDKPPGF-------- 134 (360)
T ss_pred CceEEECCceeEEEEEecCcccCCCCCeEEEECCCCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCCCCCc--------
Confidence 34566665559999999853 11358999999999999999999999998999999999999999754321
Q ss_pred chhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHh-CCCccceEEEeccCCC
Q 013006 214 STEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAAC-NPHLVKGVTLLNATPF 292 (451)
Q Consensus 214 ~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~-~P~~v~~lvl~~~~~~ 292 (451)
.|+++++++++.+++++++.++++||||||||.+++.+|.. +|++|+++|++++.+.
T Consensus 135 ----------------------~~~~~~~a~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~ 192 (360)
T PLN02679 135 ----------------------SYTMETWAELILDFLEEVVQKPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGG 192 (360)
T ss_pred ----------------------cccHHHHHHHHHHHHHHhcCCCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCccc
Confidence 17999999999999999999999999999999999998874 7999999999998642
Q ss_pred CCCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHH
Q 013006 293 WGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAAS 372 (451)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (451)
..... ................+..-.........++........+...+...+.......+.....+......+.....
T Consensus 193 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (360)
T PLN02679 193 MNNKA-VVDDWRIKLLLPLLWLIDFLLKQRGIASALFNRVKQRDNLKNILLSVYGNKEAVDDELVEIIRGPADDEGALDA 271 (360)
T ss_pred ccccc-ccchHHHhhhcchHHHHHHHhhchhhHHHHHHHhcCHHHHHHHHHHhccCcccCCHHHHHHHHhhccCCChHHH
Confidence 11100 00000000000000000000000000111111111222233333333332222222333332222222223333
Q ss_pred HHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHH-----HHHHHHHCCCCcEEEeCCCCCCccccChHHHH
Q 013006 373 FASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVW-----GLQVKRQVPEAPYYEISPAGHCPHDEVPEVCS 447 (451)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~-----~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~ 447 (451)
+........ . .+....+.++++|||+|+|++|+++|++. .+++.+.+|++++++++++||++++|+|++++
T Consensus 272 ~~~~~~~~~-~---~~~~~~l~~i~~PtLii~G~~D~~~p~~~~~~~~~~~l~~~ip~~~l~~i~~aGH~~~~E~Pe~~~ 347 (360)
T PLN02679 272 FVSIVTGPP-G---PNPIKLIPRISLPILVLWGDQDPFTPLDGPVGKYFSSLPSQLPNVTLYVLEGVGHCPHDDRPDLVH 347 (360)
T ss_pred HHHHHhcCC-C---CCHHHHhhhcCCCEEEEEeCCCCCcCchhhHHHHHHhhhccCCceEEEEcCCCCCCccccCHHHHH
Confidence 333322111 1 12234567789999999999999999863 34567778999999999999999999999999
Q ss_pred hhh
Q 013006 448 LCL 450 (451)
Q Consensus 448 ~~I 450 (451)
+.|
T Consensus 348 ~~I 350 (360)
T PLN02679 348 EKL 350 (360)
T ss_pred HHH
Confidence 876
No 3
>PLN02578 hydrolase
Probab=100.00 E-value=4.8e-32 Score=266.11 Aligned_cols=274 Identities=34% Similarity=0.623 Sum_probs=181.7
Q ss_pred ceeeecCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchh
Q 013006 137 CFWEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTE 216 (451)
Q Consensus 137 ~~~~~~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~ 216 (451)
.+|++. |.+++|...| ++++|||+||++++...|..+++.|+++|+|+++|+||||.|+.+..
T Consensus 69 ~~~~~~-~~~i~Y~~~g----~g~~vvliHG~~~~~~~w~~~~~~l~~~~~v~~~D~~G~G~S~~~~~------------ 131 (354)
T PLN02578 69 NFWTWR-GHKIHYVVQG----EGLPIVLIHGFGASAFHWRYNIPELAKKYKVYALDLLGFGWSDKALI------------ 131 (354)
T ss_pred eEEEEC-CEEEEEEEcC----CCCeEEEECCCCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCCccc------------
Confidence 455554 7999999988 46889999999999999999999999899999999999999975432
Q ss_pred hhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCC
Q 013006 217 EKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFS 296 (451)
Q Consensus 217 ~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~ 296 (451)
.|+.+.+++++.++++++..++++++||||||++++.+|.++|++|+++|++++.+.+...
T Consensus 132 -------------------~~~~~~~a~~l~~~i~~~~~~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~~~~~~ 192 (354)
T PLN02578 132 -------------------EYDAMVWRDQVADFVKEVVKEPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSAGQFGSE 192 (354)
T ss_pred -------------------ccCHHHHHHHHHHHHHHhccCCeEEEEECHHHHHHHHHHHhChHhcceEEEECCCcccccc
Confidence 2799999999999999999999999999999999999999999999999999987543322
Q ss_pred CCCCCchH--HhhhcCCCCCCCChHHHHHHHH-HHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHH
Q 013006 297 PNPIRSPK--LARILPWSGTFPLPASVRKLIE-FIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASF 373 (451)
Q Consensus 297 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (451)
........ ...........+.......... ........+..+.......+.......+.....+......+.....+
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (354)
T PLN02578 193 SREKEEAIVVEETVLTRFVVKPLKEWFQRVVLGFLFWQAKQPSRIESVLKSVYKDKSNVDDYLVESITEPAADPNAGEVY 272 (354)
T ss_pred ccccccccccccchhhHHHhHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHhcCCcccCCHHHHHHHHhcccCCchHHHH
Confidence 21100000 0000000000000001111100 01111122333333333333322222222222222222233222222
Q ss_pred HHHHhc---CCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 374 ASIMFA---PQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 374 ~~~~~~---~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
...+.. ..... +..+.+.++++|+++|+|++|.+++.+.++++++.+|+++++++ ++||++++|+|+++++.|
T Consensus 273 ~~~~~~~~~~~~~~---~~~~~l~~i~~PvLiI~G~~D~~v~~~~~~~l~~~~p~a~l~~i-~~GH~~~~e~p~~~~~~I 348 (354)
T PLN02578 273 YRLMSRFLFNQSRY---TLDSLLSKLSCPLLLLWGDLDPWVGPAKAEKIKAFYPDTTLVNL-QAGHCPHDEVPEQVNKAL 348 (354)
T ss_pred HHHHHHHhcCCCCC---CHHHHhhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCEEEEe-CCCCCccccCHHHHHHHH
Confidence 222111 11111 22344678999999999999999999999999999999999999 689999999999999886
No 4
>PRK03592 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=4.3e-31 Score=253.35 Aligned_cols=257 Identities=16% Similarity=0.149 Sum_probs=167.3
Q ss_pred cCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhcc
Q 013006 142 KPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFL 221 (451)
Q Consensus 142 ~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~ 221 (451)
.+|.+++|...| ++++|||+||++++...|..+++.|++.++|+++|+||||.|+.+...
T Consensus 14 ~~g~~i~y~~~G----~g~~vvllHG~~~~~~~w~~~~~~L~~~~~via~D~~G~G~S~~~~~~---------------- 73 (295)
T PRK03592 14 VLGSRMAYIETG----EGDPIVFLHGNPTSSYLWRNIIPHLAGLGRCLAPDLIGMGASDKPDID---------------- 73 (295)
T ss_pred ECCEEEEEEEeC----CCCEEEEECCCCCCHHHHHHHHHHHhhCCEEEEEcCCCCCCCCCCCCC----------------
Confidence 478999999998 368999999999999999999999988889999999999999765321
Q ss_pred ccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCC
Q 013006 222 WGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIR 301 (451)
Q Consensus 222 w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~ 301 (451)
|+++++++|+..++++++.++++++||||||.+++.+|.++|++|+++|++++..........
T Consensus 74 ---------------~~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~-- 136 (295)
T PRK03592 74 ---------------YTFADHARYLDAWFDALGLDDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRPMTWDDF-- 136 (295)
T ss_pred ---------------CCHHHHHHHHHHHHHHhCCCCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCCCCcchhhc--
Confidence 799999999999999999999999999999999999999999999999999974211000000
Q ss_pred chHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHH---HHHHHHHHhhcC--CCChHHHHHHHHhhccChhHHHHHHHH
Q 013006 302 SPKLARILPWSGTFPLPASVRKLIEFIWQKISDPES---IAEVLKQVYADH--ATNVDTVFTRILETTQHPAAAASFASI 376 (451)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (451)
..... .....+......... ...+....+... ....++....+......+........+
T Consensus 137 ~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (295)
T PRK03592 137 PPAVR----------------ELFQALRSPGEGEEMVLEENVFIERVLPGSILRPLSDEEMAVYRRPFPTPESRRPTLSW 200 (295)
T ss_pred chhHH----------------HHHHHHhCcccccccccchhhHHhhcccCcccccCCHHHHHHHHhhcCCchhhhhhhhh
Confidence 00000 000000000000000 000111111100 001112122222222222111111111
Q ss_pred HhcCC--CC-----CchhHHhhhccCCCCCEEEEeeCCCCCCChHHH-HHHHHHCCCCcEEEeCCCCCCccccChHHHHh
Q 013006 377 MFAPQ--GN-----LSFREALSRCQMNGVPICLIYGKEDPWVKPVWG-LQVKRQVPEAPYYEISPAGHCPHDEVPEVCSL 448 (451)
Q Consensus 377 ~~~~~--~~-----~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~-~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~ 448 (451)
..... .. ....+....+.++++|+|+|+|++|.++++... +.+.+..+++++.+++++||++++|+|+++++
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~v~~ 280 (295)
T PRK03592 201 PRELPIDGEPADVVALVEEYAQWLATSDVPKLLINAEPGAILTTGAIRDWCRSWPNQLEITVFGAGLHFAQEDSPEEIGA 280 (295)
T ss_pred hhhcCCCCcchhhHhhhhHhHHHhccCCCCeEEEeccCCcccCcHHHHHHHHHhhhhcceeeccCcchhhhhcCHHHHHH
Confidence 11100 00 001122345678999999999999999955444 44556678899999999999999999999998
Q ss_pred hhC
Q 013006 449 CLL 451 (451)
Q Consensus 449 ~Il 451 (451)
.|+
T Consensus 281 ~i~ 283 (295)
T PRK03592 281 AIA 283 (295)
T ss_pred HHH
Confidence 873
No 5
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=100.00 E-value=1.5e-31 Score=254.08 Aligned_cols=251 Identities=15% Similarity=0.132 Sum_probs=166.8
Q ss_pred cCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhcc
Q 013006 142 KPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFL 221 (451)
Q Consensus 142 ~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~ 221 (451)
.+|.+++|...+.+ +..++|||+||++++...|..+++.|+++|+|+++|+||||.|+.+..
T Consensus 9 ~~~~~~~~~~~~~~-~~~~plvllHG~~~~~~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~----------------- 70 (276)
T TIGR02240 9 LDGQSIRTAVRPGK-EGLTPLLIFNGIGANLELVFPFIEALDPDLEVIAFDVPGVGGSSTPRH----------------- 70 (276)
T ss_pred cCCcEEEEEEecCC-CCCCcEEEEeCCCcchHHHHHHHHHhccCceEEEECCCCCCCCCCCCC-----------------
Confidence 36889999875322 234799999999999999999999999899999999999999975422
Q ss_pred ccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCC
Q 013006 222 WGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIR 301 (451)
Q Consensus 222 w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~ 301 (451)
.++++++++++.++++++++++++||||||||.+++.+|.++|++|+++|++++.+.....+. .
T Consensus 71 --------------~~~~~~~~~~~~~~i~~l~~~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~--~ 134 (276)
T TIGR02240 71 --------------PYRFPGLAKLAARMLDYLDYGQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAVMVPG--K 134 (276)
T ss_pred --------------cCcHHHHHHHHHHHHHHhCcCceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCccccCCC--c
Confidence 179999999999999999999999999999999999999999999999999998753111110 0
Q ss_pred chHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCC
Q 013006 302 SPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQ 381 (451)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (451)
........... .... ..........++.......+..................+.......
T Consensus 135 ~~~~~~~~~~~------~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 195 (276)
T TIGR02240 135 PKVLMMMASPR------RYIQ------------PSHGIHIAPDIYGGAFRRDPELAMAHASKVRSGGKLGYYWQLFAGL- 195 (276)
T ss_pred hhHHHHhcCch------hhhc------------cccccchhhhhccceeeccchhhhhhhhhcccCCCchHHHHHHHHc-
Confidence 00000000000 0000 0000000000111000000011111111111100000011111000
Q ss_pred CCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 382 GNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 382 ~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
. ......+.++++|+|+|+|++|++++++..+++.+.+|+++++++++ ||++++|+|+++++.|
T Consensus 196 -~---~~~~~~l~~i~~P~lii~G~~D~~v~~~~~~~l~~~~~~~~~~~i~~-gH~~~~e~p~~~~~~i 259 (276)
T TIGR02240 196 -G---WTSIHWLHKIQQPTLVLAGDDDPIIPLINMRLLAWRIPNAELHIIDD-GHLFLITRAEAVAPII 259 (276)
T ss_pred -C---CchhhHhhcCCCCEEEEEeCCCCcCCHHHHHHHHHhCCCCEEEEEcC-CCchhhccHHHHHHHH
Confidence 0 11224467899999999999999999999999999999999999975 9999999999999876
No 6
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.98 E-value=3.5e-30 Score=252.50 Aligned_cols=259 Identities=20% Similarity=0.250 Sum_probs=169.2
Q ss_pred ecCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhc
Q 013006 141 WKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNF 220 (451)
Q Consensus 141 ~~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~ 220 (451)
..+|.+++|.+.|+. ++++|||+||++.+...|+.+++.|+++|+|+++|+||||.|+.+.....
T Consensus 111 ~~~~~~~~y~~~G~~--~~~~ivllHG~~~~~~~w~~~~~~L~~~~~Via~DlpG~G~S~~p~~~~~------------- 175 (383)
T PLN03084 111 SSDLFRWFCVESGSN--NNPPVLLIHGFPSQAYSYRKVLPVLSKNYHAIAFDWLGFGFSDKPQPGYG------------- 175 (383)
T ss_pred cCCceEEEEEecCCC--CCCeEEEECCCCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCCCccccc-------------
Confidence 468999999999964 46899999999999999999999999899999999999999976533110
Q ss_pred cccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCC
Q 013006 221 LWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPI 300 (451)
Q Consensus 221 ~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~ 300 (451)
..|+++++++++..+++++++++++|+|||+||++++.+|.++|++|+++|++++....... .
T Consensus 176 --------------~~ys~~~~a~~l~~~i~~l~~~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~~~~~---~ 238 (383)
T PLN03084 176 --------------FNYTLDEYVSSLESLIDELKSDKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLTKEHA---K 238 (383)
T ss_pred --------------ccCCHHHHHHHHHHHHHHhCCCCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCccccc---c
Confidence 12799999999999999999999999999999999999999999999999999985321000 0
Q ss_pred CchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhh--cCCCChHHHHHHHHhhccChhH----HHHHH
Q 013006 301 RSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYA--DHATNVDTVFTRILETTQHPAA----AASFA 374 (451)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 374 (451)
....+.. +...+........... .....+. ......++....+......+.. ...+.
T Consensus 239 ~p~~l~~----------------~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~ 301 (383)
T PLN03084 239 LPSTLSE----------------FSNFLLGEIFSQDPLR-ASDKALTSCGPYAMKEDDAMVYRRPYLTSGSSGFALNAIS 301 (383)
T ss_pred chHHHHH----------------HHHHHhhhhhhcchHH-HHhhhhcccCccCCCHHHHHHHhccccCCcchHHHHHHHH
Confidence 0000000 0000000000000000 0000000 0000111111111111111110 11111
Q ss_pred HHHhcCCCCCchhHHhhh--ccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 375 SIMFAPQGNLSFREALSR--CQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~--l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
..+....... ..+.... ..++++|||+|+|++|.+++.+..+++++. +++++.+++++||++++|+|++++++|
T Consensus 302 r~~~~~l~~~-~~~l~~~l~~~~i~vPvLiI~G~~D~~v~~~~~~~~a~~-~~a~l~vIp~aGH~~~~E~Pe~v~~~I 377 (383)
T PLN03084 302 RSMKKELKKY-IEEMRSILTDKNWKTPITVCWGLRDRWLNYDGVEDFCKS-SQHKLIELPMAGHHVQEDCGEELGGII 377 (383)
T ss_pred HHhhcccchh-hHHHHhhhccccCCCCEEEEeeCCCCCcCHHHHHHHHHh-cCCeEEEECCCCCCcchhCHHHHHHHH
Confidence 1111100000 0111111 145799999999999999999988888887 588999999999999999999999987
No 7
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.98 E-value=6.5e-31 Score=241.97 Aligned_cols=270 Identities=21% Similarity=0.304 Sum_probs=176.8
Q ss_pred CccceeeecCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcC-CceEEEEcCCCCCCCCCCCCCCCCCCCC
Q 013006 134 ITSCFWEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKEG 212 (451)
Q Consensus 134 ~~~~~~~~~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~~ 212 (451)
++..+++. +|++++|.+.|+. ++|.|||+||++..+.+|+.++..|+. +|+|+++|+||+|.|+.++.-.
T Consensus 22 ~~hk~~~~-~gI~~h~~e~g~~--~gP~illlHGfPe~wyswr~q~~~la~~~~rviA~DlrGyG~Sd~P~~~~------ 92 (322)
T KOG4178|consen 22 ISHKFVTY-KGIRLHYVEGGPG--DGPIVLLLHGFPESWYSWRHQIPGLASRGYRVIAPDLRGYGFSDAPPHIS------ 92 (322)
T ss_pred cceeeEEE-ccEEEEEEeecCC--CCCEEEEEccCCccchhhhhhhhhhhhcceEEEecCCCCCCCCCCCCCcc------
Confidence 44444444 5699999999874 689999999999999999999999976 4999999999999998776532
Q ss_pred CchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCC
Q 013006 213 DSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPF 292 (451)
Q Consensus 213 ~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~ 292 (451)
.||++.++.|+..+|++|+.++++++||+||+++|+.+|..+|++|+++|+++....
T Consensus 93 -----------------------~Yt~~~l~~di~~lld~Lg~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~ 149 (322)
T KOG4178|consen 93 -----------------------EYTIDELVGDIVALLDHLGLKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFP 149 (322)
T ss_pred -----------------------eeeHHHHHHHHHHHHHHhccceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCC
Confidence 299999999999999999999999999999999999999999999999999998653
Q ss_pred CCCCCCCCCchHH--hhhc--CC-CCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCC---------------C
Q 013006 293 WGFSPNPIRSPKL--ARIL--PW-SGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHAT---------------N 352 (451)
Q Consensus 293 ~~~~~~~~~~~~~--~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~ 352 (451)
++...+.. ...+ .+ .-.+.-+...+.... ...........+..... .
T Consensus 150 -----~p~~~~~~~~~~~f~~~~y~~~fQ~~~~~E~~~s--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~ 216 (322)
T KOG4178|consen 150 -----NPKLKPLDSSKAIFGKSYYICLFQEPGKPETELS--------KDDTEMLVKTFRTRKTPGPLIVPKQPNENPLWL 216 (322)
T ss_pred -----CcccchhhhhccccCccceeEeccccCcchhhhc--------cchhHHhHHhhhccccCCccccCCCCCCccchh
Confidence 11111111 0100 00 000111111110000 00000111111110000 0
Q ss_pred hHHHHHHHHhhccChhHHHHHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChH-HHHHHHHHCCCC-cEEE
Q 013006 353 VDTVFTRILETTQHPAAAASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPV-WGLQVKRQVPEA-PYYE 430 (451)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~-~~~~l~~~lp~~-~~~~ 430 (451)
.++..+.+........ ......+........ ....-.+.++++||++|+|+.|.+.+.. ....+.+.+|+. +.++
T Consensus 217 t~edi~~~~~~f~~~g-~~gplNyyrn~~r~w--~a~~~~~~~i~iPv~fi~G~~D~v~~~p~~~~~~rk~vp~l~~~vv 293 (322)
T KOG4178|consen 217 TEEDIAFYVSKFQIDG-FTGPLNYYRNFRRNW--EAAPWALAKITIPVLFIWGDLDPVLPYPIFGELYRKDVPRLTERVV 293 (322)
T ss_pred hHHHHHHHHhcccccc-ccccchhhHHHhhCc--hhccccccccccceEEEEecCcccccchhHHHHHHHhhccccceEE
Confidence 1122222222221111 111111111111011 0112345788999999999999998765 666777788886 7889
Q ss_pred eCCCCCCccccChHHHHhhhC
Q 013006 431 ISPAGHCPHDEVPEVCSLCLL 451 (451)
Q Consensus 431 i~~~gH~~~~e~p~~v~~~Il 451 (451)
++++||++++|+|++++++|+
T Consensus 294 ~~~~gH~vqqe~p~~v~~~i~ 314 (322)
T KOG4178|consen 294 IEGIGHFVQQEKPQEVNQAIL 314 (322)
T ss_pred ecCCcccccccCHHHHHHHHH
Confidence 999999999999999999874
No 8
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.98 E-value=7.5e-30 Score=254.87 Aligned_cols=276 Identities=20% Similarity=0.252 Sum_probs=170.2
Q ss_pred eeeecCCeEEEEeecCCCC-CCCCcEEEecCCCCChhcHHH-HHHhhc----CCceEEEEcCCCCCCCCCCCCCCCCCCC
Q 013006 138 FWEWKPKFNVHYEKAGCEN-VNSPPVLFLPGFGVGSFHYEK-QLKDLG----KDYRAWAIDFLGQGMSLPDEDPTPRSKE 211 (451)
Q Consensus 138 ~~~~~~g~~l~y~~~g~~~-~~~p~VlllHG~~~~~~~~~~-~~~~L~----~~~~Vi~~D~rG~G~S~~~~~~~~~~~~ 211 (451)
.|...+|.+++|...|+.+ +.+++|||+||++++...|.. +++.|+ ++|+|+++|+||||.|+.+...
T Consensus 179 ~~~~~~~~~l~~~~~gp~~~~~k~~VVLlHG~~~s~~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~~------ 252 (481)
T PLN03087 179 SWLSSSNESLFVHVQQPKDNKAKEDVLFIHGFISSSAFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPADS------ 252 (481)
T ss_pred eeEeeCCeEEEEEEecCCCCCCCCeEEEECCCCccHHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCCC------
Confidence 3444567999999999864 235899999999999999985 446664 5899999999999999754221
Q ss_pred CCchhhhhccccCCCCCCccccccccCHHHHHHHHH-HHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccC
Q 013006 212 GDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVC-YFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNAT 290 (451)
Q Consensus 212 ~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~-~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~ 290 (451)
.|+++++++++. .+++++++++++++||||||++++.+|.++|++|+++|++++.
T Consensus 253 ------------------------~ytl~~~a~~l~~~ll~~lg~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~ 308 (481)
T PLN03087 253 ------------------------LYTLREHLEMIERSVLERYKVKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPP 308 (481)
T ss_pred ------------------------cCCHHHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCC
Confidence 279999999994 8999999999999999999999999999999999999999975
Q ss_pred CCCCCCCCCCCc-hHH-hhhcCCC--CCCCChHHHHHHHHHHHHhc-----CChHHHHHHHHHHhhcCCCChHHHHHHHH
Q 013006 291 PFWGFSPNPIRS-PKL-ARILPWS--GTFPLPASVRKLIEFIWQKI-----SDPESIAEVLKQVYADHATNVDTVFTRIL 361 (451)
Q Consensus 291 ~~~~~~~~~~~~-~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (451)
.+. .+..... ... ....... .................... ..+ .....+........ ......+.+.
T Consensus 309 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~-~~~~l~~~~~ 384 (481)
T PLN03087 309 YYP--VPKGVQATQYVMRKVAPRRVWPPIAFGASVACWYEHISRTICLVICKNH-RLWEFLTRLLTRNR-MRTFLIEGFF 384 (481)
T ss_pred ccc--cccchhHHHHHHHHhcccccCCccccchhHHHHHHHHHhhhhcccccch-HHHHHHHHHhhhhh-hhHHHHHHHH
Confidence 431 1111000 000 0000000 00000011111100000000 000 01111111111100 0000111111
Q ss_pred hhccChhHHHHHHHHHhcCCCCCchhHHhh-hccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccc
Q 013006 362 ETTQHPAAAASFASIMFAPQGNLSFREALS-RCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHD 440 (451)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~ 440 (451)
... .......+..+..... ....+.+. ...++++|+|+|+|++|.++|++..+.+++.+|++++++++++||++++
T Consensus 385 ~~~-~~~~~~~l~~~i~~~~--~~l~~~l~~l~~~I~vPtLII~Ge~D~ivP~~~~~~la~~iP~a~l~vI~~aGH~~~v 461 (481)
T PLN03087 385 CHT-HNAAWHTLHNIICGSG--SKLDGYLDHVRDQLKCDVAIFHGGDDELIPVECSYAVKAKVPRARVKVIDDKDHITIV 461 (481)
T ss_pred hcc-chhhHHHHHHHHhchh--hhhhhHHHHHHHhCCCCEEEEEECCCCCCCHHHHHHHHHhCCCCEEEEeCCCCCcchh
Confidence 100 0111111111111100 00011122 2236899999999999999999999999999999999999999999885
Q ss_pred -cChHHHHhhh
Q 013006 441 -EVPEVCSLCL 450 (451)
Q Consensus 441 -e~p~~v~~~I 450 (451)
|+|+++++.|
T Consensus 462 ~e~p~~fa~~L 472 (481)
T PLN03087 462 VGRQKEFAREL 472 (481)
T ss_pred hcCHHHHHHHH
Confidence 9999999886
No 9
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.98 E-value=5.7e-30 Score=244.12 Aligned_cols=267 Identities=18% Similarity=0.297 Sum_probs=170.1
Q ss_pred CCCccceeeecCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCC
Q 013006 132 APITSCFWEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKE 211 (451)
Q Consensus 132 ~~~~~~~~~~~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~ 211 (451)
.++...+++. +|.+++|...| ++++|||+||++.+...|..+++.|.++|+|+++|+||||.|+.+...
T Consensus 12 ~~~~~~~~~~-~~~~i~y~~~G----~~~~iv~lHG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~------ 80 (286)
T PRK03204 12 YPFESRWFDS-SRGRIHYIDEG----TGPPILLCHGNPTWSFLYRDIIVALRDRFRCVAPDYLGFGLSERPSGF------ 80 (286)
T ss_pred ccccceEEEc-CCcEEEEEECC----CCCEEEEECCCCccHHHHHHHHHHHhCCcEEEEECCCCCCCCCCCCcc------
Confidence 3455556555 67899999998 368999999999999999999999998999999999999999754321
Q ss_pred CCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCC
Q 013006 212 GDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATP 291 (451)
Q Consensus 212 ~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~ 291 (451)
.++++++++++.+++++++.++++++||||||.+++.+|..+|++|+++|++++..
T Consensus 81 ------------------------~~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~ 136 (286)
T PRK03204 81 ------------------------GYQIDEHARVIGEFVDHLGLDRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWF 136 (286)
T ss_pred ------------------------ccCHHHHHHHHHHHHHHhCCCCEEEEEECccHHHHHHHHHhChhheeEEEEECccc
Confidence 17899999999999999999999999999999999999999999999999987642
Q ss_pred CCCCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHH
Q 013006 292 FWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAA 371 (451)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (451)
. .+............. .... ...+.. ........+.... .....+.....+......+....
T Consensus 137 ~---~~~~~~~~~~~~~~~---~~~~---~~~~~~-------~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 198 (286)
T PRK03204 137 W---PADTLAMKAFSRVMS---SPPV---QYAILR-------RNFFVERLIPAGT--EHRPSSAVMAHYRAVQPNAAARR 198 (286)
T ss_pred c---CCCchhHHHHHHHhc---cccc---hhhhhh-------hhHHHHHhccccc--cCCCCHHHHHHhcCCCCCHHHHH
Confidence 1 000000000000000 0000 000000 0000011110000 00111122222222222222222
Q ss_pred HHHHHHhcCCCCCc-hhHHhhhcc--CCCCCEEEEeeCCCCCCChH-HHHHHHHHCCCCcEEEeCCCCCCccccChHHHH
Q 013006 372 SFASIMFAPQGNLS-FREALSRCQ--MNGVPICLIYGKEDPWVKPV-WGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCS 447 (451)
Q Consensus 372 ~~~~~~~~~~~~~~-~~~~~~~l~--~i~~PvLii~G~~D~~v~~~-~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~ 447 (451)
.+............ ..+....+. .+++|||+|+|++|.++++. ..+.+++.+|++++++++++||++++|+|++++
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PtliI~G~~D~~~~~~~~~~~~~~~ip~~~~~~i~~aGH~~~~e~Pe~~~ 278 (286)
T PRK03204 199 GVAEMPKQILAARPLLARLAREVPATLGTKPTLLVWGMKDVAFRPKTILPRLRATFPDHVLVELPNAKHFIQEDAPDRIA 278 (286)
T ss_pred HHHHHHHhcchhhHHHHHhhhhhhhhcCCCCeEEEecCCCcccCcHHHHHHHHHhcCCCeEEEcCCCcccccccCHHHHH
Confidence 11111100000000 011111111 13899999999999988654 678899999999999999999999999999999
Q ss_pred hhhC
Q 013006 448 LCLL 451 (451)
Q Consensus 448 ~~Il 451 (451)
+.|.
T Consensus 279 ~~i~ 282 (286)
T PRK03204 279 AAII 282 (286)
T ss_pred HHHH
Confidence 9873
No 10
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.97 E-value=2.2e-30 Score=249.22 Aligned_cols=253 Identities=20% Similarity=0.218 Sum_probs=163.5
Q ss_pred eEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcC-CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhcccc
Q 013006 145 FNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWG 223 (451)
Q Consensus 145 ~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~ 223 (451)
.+|+|...|.+ ++|+|||+||++.+...|..+++.|++ +|+|+++|+||||.|+.+....
T Consensus 34 ~~i~y~~~G~~--~~~~lvliHG~~~~~~~w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~~~~~----------------- 94 (302)
T PRK00870 34 LRMHYVDEGPA--DGPPVLLLHGEPSWSYLYRKMIPILAAAGHRVIAPDLIGFGRSDKPTRRE----------------- 94 (302)
T ss_pred EEEEEEecCCC--CCCEEEEECCCCCchhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCCcc-----------------
Confidence 78999999853 478999999999999999999999974 7999999999999997543211
Q ss_pred CCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCch
Q 013006 224 FGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSP 303 (451)
Q Consensus 224 ~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~ 303 (451)
.|+++++++|+.++++++++++++++||||||.+++.+|.++|++|+++|++++........ ...
T Consensus 95 ------------~~~~~~~a~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~---~~~ 159 (302)
T PRK00870 95 ------------DYTYARHVEWMRSWFEQLDLTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGLPTGDGP---MPD 159 (302)
T ss_pred ------------cCCHHHHHHHHHHHHHHcCCCCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCCCCcccc---chH
Confidence 27999999999999999999999999999999999999999999999999998742111000 000
Q ss_pred HHhhhcCCCCCCCChHH-HHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCC-
Q 013006 304 KLARILPWSGTFPLPAS-VRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQ- 381 (451)
Q Consensus 304 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 381 (451)
.......... ..+.. ............... +.... +...... ...... ...+........
T Consensus 160 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~----~~~~~-~~~~~~~--~~~~~~---------~~~~~~~~~~~~~ 221 (302)
T PRK00870 160 AFWAWRAFSQ--YSPVLPVGRLVNGGTVRDLSD----AVRAA-YDAPFPD--ESYKAG---------ARAFPLLVPTSPD 221 (302)
T ss_pred HHhhhhcccc--cCchhhHHHHhhccccccCCH----HHHHH-hhcccCC--hhhhcc---------hhhhhhcCCCCCC
Confidence 1111000000 00000 000000000000000 00000 0000000 000000 000000000000
Q ss_pred --CCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCc---EEEeCCCCCCccccChHHHHhhh
Q 013006 382 --GNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAP---YYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 382 --~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~---~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
......+....+.++++|+++|+|++|+++|... +++.+.+|+++ +.+++++||++++|+|+++++.|
T Consensus 222 ~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~-~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l 294 (302)
T PRK00870 222 DPAVAANRAAWAVLERWDKPFLTAFSDSDPITGGGD-AILQKRIPGAAGQPHPTIKGAGHFLQEDSGEELAEAV 294 (302)
T ss_pred CcchHHHHHHHHhhhcCCCceEEEecCCCCcccCch-HHHHhhcccccccceeeecCCCccchhhChHHHHHHH
Confidence 0001112334567899999999999999999876 88999999876 88999999999999999999876
No 11
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.97 E-value=1.8e-30 Score=243.77 Aligned_cols=245 Identities=18% Similarity=0.233 Sum_probs=156.8
Q ss_pred EEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCC
Q 013006 146 NVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFG 225 (451)
Q Consensus 146 ~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~ 225 (451)
.++|...|. ..|+|||+||++.++..|..+++.|.++|+|+++|+||||.|....
T Consensus 3 ~~~y~~~G~---g~~~ivllHG~~~~~~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~---------------------- 57 (256)
T PRK10349 3 NIWWQTKGQ---GNVHLVLLHGWGLNAEVWRCIDEELSSHFTLHLVDLPGFGRSRGFG---------------------- 57 (256)
T ss_pred ccchhhcCC---CCCeEEEECCCCCChhHHHHHHHHHhcCCEEEEecCCCCCCCCCCC----------------------
Confidence 367888883 2246999999999999999999999989999999999999996421
Q ss_pred CCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCchHH
Q 013006 226 DKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKL 305 (451)
Q Consensus 226 ~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~ 305 (451)
.++++++++++.+ +..+++++|||||||.+++.+|.++|++|+++|++++.+.......
T Consensus 58 ----------~~~~~~~~~~l~~----~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~~------- 116 (256)
T PRK10349 58 ----------ALSLADMAEAVLQ----QAPDKAIWLGWSLGGLVASQIALTHPERVQALVTVASSPCFSARDE------- 116 (256)
T ss_pred ----------CCCHHHHHHHHHh----cCCCCeEEEEECHHHHHHHHHHHhChHhhheEEEecCccceecCCC-------
Confidence 1688888877653 5678999999999999999999999999999999998643211000
Q ss_pred hhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhc-cCh-hHHHHHHHHHhcCCCC
Q 013006 306 ARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETT-QHP-AAAASFASIMFAPQGN 383 (451)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~ 383 (451)
+... .......+...+.. ........++....... .........+.... ..+ .........+..
T Consensus 117 -----~~~~--~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 182 (256)
T PRK10349 117 -----WPGI--KPDVLAGFQQQLSD--DFQRTVERFLALQTMGT-ETARQDARALKKTVLALPMPEVDVLNGGLEI---- 182 (256)
T ss_pred -----CCcc--cHHHHHHHHHHHHh--chHHHHHHHHHHHHccC-chHHHHHHHHHHHhhccCCCcHHHHHHHHHH----
Confidence 0000 00011111110000 00011111111100000 00011111111100 000 000000000000
Q ss_pred CchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 384 LSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 384 ~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
....+....+.++++|||+|+|++|.++|.+.++.+++.+|++++.+++++||++++|+|++|++.|
T Consensus 183 ~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~i~~~~~~~i~~~gH~~~~e~p~~f~~~l 249 (256)
T PRK10349 183 LKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWPHSESYIFAKAAHAPFISHPAEFCHLL 249 (256)
T ss_pred HHhCccHHHHhhcCCCeEEEecCCCccCCHHHHHHHHHhCCCCeEEEeCCCCCCccccCHHHHHHHH
Confidence 0001233456789999999999999999999999999999999999999999999999999999876
No 12
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.97 E-value=1.4e-29 Score=241.05 Aligned_cols=253 Identities=20% Similarity=0.258 Sum_probs=159.6
Q ss_pred CeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHH---HHhh-cCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhh
Q 013006 144 KFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQ---LKDL-GKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKN 219 (451)
Q Consensus 144 g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~---~~~L-~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~ 219 (451)
|.+++|...| ++|+|||+||++.+...|..+ +..| .++|+|+++|+||||.|+......
T Consensus 19 ~~~~~y~~~g----~~~~ivllHG~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~------------- 81 (282)
T TIGR03343 19 NFRIHYNEAG----NGEAVIMLHGGGPGAGGWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDE------------- 81 (282)
T ss_pred ceeEEEEecC----CCCeEEEECCCCCchhhHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCcc-------------
Confidence 5779999887 357999999999888888643 3444 457999999999999997542110
Q ss_pred ccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCC
Q 013006 220 FLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNP 299 (451)
Q Consensus 220 ~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~ 299 (451)
..+. .+++++.+++++++.++++++||||||++++.+|.++|++|+++|++++.........+
T Consensus 82 ----------------~~~~-~~~~~l~~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~ 144 (282)
T TIGR03343 82 ----------------QRGL-VNARAVKGLMDALDIEKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPSLFAP 144 (282)
T ss_pred ----------------cccc-hhHHHHHHHHHHcCCCCeeEEEECchHHHHHHHHHhChHhhceEEEECCCCCCcccccc
Confidence 0122 56889999999999999999999999999999999999999999999975321000000
Q ss_pred CCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHh-hccChhHHHHHHHHHh
Q 013006 300 IRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILE-TTQHPAAAASFASIMF 378 (451)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 378 (451)
.... ......... ...........+...........+........ ....+.....+.....
T Consensus 145 ~~~~----------------~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (282)
T TIGR03343 145 MPME----------------GIKLLFKLY--AEPSYETLKQMLNVFLFDQSLITEELLQGRWENIQRQPEHLKNFLISSQ 206 (282)
T ss_pred CchH----------------HHHHHHHHh--cCCCHHHHHHHHhhCccCcccCcHHHHHhHHHHhhcCHHHHHHHHHhcc
Confidence 0000 000000000 00000111111111000000001111111110 0111111111111000
Q ss_pred cCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 379 APQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 379 ~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
.......+....++++++|+|+|+|++|.+++++.++++++.+|++++++++++||+++.|+|+++++.|
T Consensus 207 --~~~~~~~~~~~~l~~i~~Pvlli~G~~D~~v~~~~~~~~~~~~~~~~~~~i~~agH~~~~e~p~~~~~~i 276 (282)
T TIGR03343 207 --KAPLSTWDVTARLGEIKAKTLVTWGRDDRFVPLDHGLKLLWNMPDAQLHVFSRCGHWAQWEHADAFNRLV 276 (282)
T ss_pred --ccccccchHHHHHhhCCCCEEEEEccCCCcCCchhHHHHHHhCCCCEEEEeCCCCcCCcccCHHHHHHHH
Confidence 0011112334456789999999999999999999999999999999999999999999999999999876
No 13
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.97 E-value=2.7e-29 Score=238.13 Aligned_cols=263 Identities=21% Similarity=0.255 Sum_probs=172.3
Q ss_pred eecCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhh
Q 013006 140 EWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKN 219 (451)
Q Consensus 140 ~~~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~ 219 (451)
...+|.+++|...|+. ++|+|||+||++++...|..+++.|+++|+|+++|+||||.|+.+...
T Consensus 11 ~~~~~~~~~~~~~g~~--~~~~vv~~hG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~-------------- 74 (278)
T TIGR03056 11 VTVGPFHWHVQDMGPT--AGPLLLLLHGTGASTHSWRDLMPPLARSFRVVAPDLPGHGFTRAPFRF-------------- 74 (278)
T ss_pred eeECCEEEEEEecCCC--CCCeEEEEcCCCCCHHHHHHHHHHHhhCcEEEeecCCCCCCCCCcccc--------------
Confidence 3458999999999863 468999999999999999999999998999999999999999754321
Q ss_pred ccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCC
Q 013006 220 FLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNP 299 (451)
Q Consensus 220 ~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~ 299 (451)
.++++++++|+.++++++++++++|+||||||++++.+|.++|++++++|++++..........
T Consensus 75 ----------------~~~~~~~~~~l~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~ 138 (278)
T TIGR03056 75 ----------------RFTLPSMAEDLSALCAAEGLSPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPFEGMAG 138 (278)
T ss_pred ----------------CCCHHHHHHHHHHHHHHcCCCCceEEEECccHHHHHHHHHhCCcccceEEEEcCcccccccccc
Confidence 1799999999999999999999999999999999999999999999999999875321000000
Q ss_pred CCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChH-HHHHHHHhhccChhHHHHHHHHHh
Q 013006 300 IRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVD-TVFTRILETTQHPAAAASFASIMF 378 (451)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 378 (451)
...+....... .... ...+.. ........+..... ......+ .....+..................
T Consensus 139 ~~~~~~~~~~~---~~~~---~~~~~~---~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (278)
T TIGR03056 139 TLFPYMARVLA---CNPF---TPPMMS---RGAADQQRVERLIR----DTGSLLDKAGMTYYGRLIRSPAHVDGALSMMA 205 (278)
T ss_pred cccchhhHhhh---hccc---chHHHH---hhcccCcchhHHhh----ccccccccchhhHHHHhhcCchhhhHHHHHhh
Confidence 00000000000 0000 000000 00000011111111 0000000 000101000111110111111110
Q ss_pred cCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhhC
Q 013006 379 APQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCLL 451 (451)
Q Consensus 379 ~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~Il 451 (451)
.+........+.++++|+++|+|++|.++|++..+.+.+.++++++.+++++||++++|+|+++++.|.
T Consensus 206 ----~~~~~~~~~~~~~i~~P~lii~g~~D~~vp~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~ 274 (278)
T TIGR03056 206 ----QWDLAPLNRDLPRITIPLHLIAGEEDKAVPPDESKRAATRVPTATLHVVPGGGHLVHEEQADGVVGLIL 274 (278)
T ss_pred ----cccccchhhhcccCCCCEEEEEeCCCcccCHHHHHHHHHhccCCeEEEECCCCCcccccCHHHHHHHHH
Confidence 111112334567889999999999999999999999999999999999999999999999999998873
No 14
>PLN02965 Probable pheophorbidase
Probab=99.97 E-value=1.7e-29 Score=237.09 Aligned_cols=236 Identities=19% Similarity=0.301 Sum_probs=153.2
Q ss_pred cEEEecCCCCChhcHHHHHHhh-cCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccccCH
Q 013006 161 PVLFLPGFGVGSFHYEKQLKDL-GKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSV 239 (451)
Q Consensus 161 ~VlllHG~~~~~~~~~~~~~~L-~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~ 239 (451)
.|||+||++.+...|+.+++.| .++|+|+++|+||||.|..+... .+++
T Consensus 5 ~vvllHG~~~~~~~w~~~~~~L~~~~~~via~Dl~G~G~S~~~~~~------------------------------~~~~ 54 (255)
T PLN02965 5 HFVFVHGASHGAWCWYKLATLLDAAGFKSTCVDLTGAGISLTDSNT------------------------------VSSS 54 (255)
T ss_pred EEEEECCCCCCcCcHHHHHHHHhhCCceEEEecCCcCCCCCCCccc------------------------------cCCH
Confidence 5999999999999999999999 66899999999999999643221 1789
Q ss_pred HHHHHHHHHHHHHhCC-CCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCchHHhhhcCCCCCCCCh
Q 013006 240 DLWQDQVCYFIKEVIR-EPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLP 318 (451)
Q Consensus 240 ~~~a~dv~~ll~~l~~-~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (451)
+++++|+.+++++++. +++++|||||||.+++.+|.++|++|+++|++++.+.... ...............
T Consensus 55 ~~~a~dl~~~l~~l~~~~~~~lvGhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~---~~~~~~~~~~~~~~~----- 126 (255)
T PLN02965 55 DQYNRPLFALLSDLPPDHKVILVGHSIGGGSVTEALCKFTDKISMAIYVAAAMVKPG---SIISPRLKNVMEGTE----- 126 (255)
T ss_pred HHHHHHHHHHHHhcCCCCCEEEEecCcchHHHHHHHHhCchheeEEEEEccccCCCC---CCccHHHHhhhhccc-----
Confidence 9999999999999987 5999999999999999999999999999999998632100 000111110000000
Q ss_pred HHHHHHHHHHH-HhcCChH---HH-HHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCCCCCchhHHhhhc
Q 013006 319 ASVRKLIEFIW-QKISDPE---SI-AEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSFREALSRC 393 (451)
Q Consensus 319 ~~~~~~~~~~~-~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 393 (451)
....... .....+. .. .......+... ...+. ........ .+.....+. ...+....+
T Consensus 127 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~-~~~~~~~~~----------~~~~~~~~~ 189 (255)
T PLN02965 127 ----KIWDYTFGEGPDKPPTGIMMKPEFVRHYYYNQ-SPLED-YTLSSKLL-RPAPVRAFQ----------DLDKLPPNP 189 (255)
T ss_pred ----cceeeeeccCCCCCcchhhcCHHHHHHHHhcC-CCHHH-HHHHHHhc-CCCCCcchh----------hhhhccchh
Confidence 0000000 0000000 00 00110111010 00000 00000000 000000000 001111234
Q ss_pred cCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhhC
Q 013006 394 QMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCLL 451 (451)
Q Consensus 394 ~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~Il 451 (451)
..+++|+++|+|++|.++|++.++.+++.+|++++++++++||++++|+|++|++.|+
T Consensus 190 ~~i~vP~lvi~g~~D~~~~~~~~~~~~~~~~~a~~~~i~~~GH~~~~e~p~~v~~~l~ 247 (255)
T PLN02965 190 EAEKVPRVYIKTAKDNLFDPVRQDVMVENWPPAQTYVLEDSDHSAFFSVPTTLFQYLL 247 (255)
T ss_pred hcCCCCEEEEEcCCCCCCCHHHHHHHHHhCCcceEEEecCCCCchhhcCHHHHHHHHH
Confidence 5689999999999999999999999999999999999999999999999999998763
No 15
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.97 E-value=2.7e-29 Score=231.68 Aligned_cols=270 Identities=21% Similarity=0.343 Sum_probs=178.0
Q ss_pred CCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccc
Q 013006 143 PKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLW 222 (451)
Q Consensus 143 ~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w 222 (451)
++..+......+++.+.+++||+||+|++...|...++.|++.++|+++|++|+|.|+++.-+....
T Consensus 74 ~~~~iw~~~~~~~~~~~~plVliHGyGAg~g~f~~Nf~~La~~~~vyaiDllG~G~SSRP~F~~d~~------------- 140 (365)
T KOG4409|consen 74 NGIEIWTITVSNESANKTPLVLIHGYGAGLGLFFRNFDDLAKIRNVYAIDLLGFGRSSRPKFSIDPT------------- 140 (365)
T ss_pred CCceeEEEeecccccCCCcEEEEeccchhHHHHHHhhhhhhhcCceEEecccCCCCCCCCCCCCCcc-------------
Confidence 5566666666666667899999999999999999999999999999999999999998875432111
Q ss_pred cCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCc
Q 013006 223 GFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRS 302 (451)
Q Consensus 223 ~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~ 302 (451)
-..+.+++-+.++....++++.+|||||+||+++..||.+||++|+.|||++|.++.. .+...
T Consensus 141 --------------~~e~~fvesiE~WR~~~~L~KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~---~~~~~ 203 (365)
T KOG4409|consen 141 --------------TAEKEFVESIEQWRKKMGLEKMILVGHSFGGYLAAKYALKYPERVEKLILVSPWGFPE---KPDSE 203 (365)
T ss_pred --------------cchHHHHHHHHHHHHHcCCcceeEeeccchHHHHHHHHHhChHhhceEEEeccccccc---CCCcc
Confidence 3455889999999999999999999999999999999999999999999999975432 22111
Q ss_pred hHH--------hhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChH-HH-HHHHHhhc-cChhHHH
Q 013006 303 PKL--------ARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVD-TV-FTRILETT-QHPAAAA 371 (451)
Q Consensus 303 ~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~-~~~~~~~ 371 (451)
+.. ..+..|...+.--..++. .....+..+..+....+.......+ +. .+.++... ..+....
T Consensus 204 ~~~~~~~~~w~~~~~~~~~~~nPl~~LR~------~Gp~Gp~Lv~~~~~d~~~k~~~~~~ed~l~~YiY~~n~~~psgE~ 277 (365)
T KOG4409|consen 204 PEFTKPPPEWYKALFLVATNFNPLALLRL------MGPLGPKLVSRLRPDRFRKFPSLIEEDFLHEYIYHCNAQNPSGET 277 (365)
T ss_pred hhhcCCChHHHhhhhhhhhcCCHHHHHHh------ccccchHHHhhhhHHHHHhccccchhHHHHHHHHHhcCCCCcHHH
Confidence 111 111122211111111111 1112233333333333332221111 22 23333322 3333333
Q ss_pred HHHHHHhcCCCCCchhHHhhhccCCC--CCEEEEeeCCCCCCChHHHHHHHHHC--CCCcEEEeCCCCCCccccChHHHH
Q 013006 372 SFASIMFAPQGNLSFREALSRCQMNG--VPICLIYGKEDPWVKPVWGLQVKRQV--PEAPYYEISPAGHCPHDEVPEVCS 447 (451)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~l~~i~--~PvLii~G~~D~~v~~~~~~~l~~~l--p~~~~~~i~~~gH~~~~e~p~~v~ 447 (451)
.+...+.. . .+.....+.++..++ ||+++|+|++| +++...+.++.+.+ ..++.+++|++||.+.+|+|+.|+
T Consensus 278 ~fk~l~~~-~-g~Ar~Pm~~r~~~l~~~~pv~fiyG~~d-WmD~~~g~~~~~~~~~~~~~~~~v~~aGHhvylDnp~~Fn 354 (365)
T KOG4409|consen 278 AFKNLFEP-G-GWARRPMIQRLRELKKDVPVTFIYGDRD-WMDKNAGLEVTKSLMKEYVEIIIVPGAGHHVYLDNPEFFN 354 (365)
T ss_pred HHHHHHhc-c-chhhhhHHHHHHhhccCCCEEEEecCcc-cccchhHHHHHHHhhcccceEEEecCCCceeecCCHHHHH
Confidence 33333322 1 233345666666665 99999999999 55666666666543 348999999999999999999999
Q ss_pred hhhC
Q 013006 448 LCLL 451 (451)
Q Consensus 448 ~~Il 451 (451)
+.|+
T Consensus 355 ~~v~ 358 (365)
T KOG4409|consen 355 QIVL 358 (365)
T ss_pred HHHH
Confidence 9874
No 16
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.97 E-value=4.3e-29 Score=234.06 Aligned_cols=243 Identities=16% Similarity=0.180 Sum_probs=161.6
Q ss_pred EEEEeecCCC-CCCCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccC
Q 013006 146 NVHYEKAGCE-NVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGF 224 (451)
Q Consensus 146 ~l~y~~~g~~-~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~ 224 (451)
+++|...++. ..++|+|||+||++++...|..++..|+++|+|+++|+||||.|.....
T Consensus 2 ~~~~~~~~~~~~~~~~~iv~lhG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~s~~~~~-------------------- 61 (255)
T PRK10673 2 KLNIRAQTAQNPHNNSPIVLVHGLFGSLDNLGVLARDLVNDHDIIQVDMRNHGLSPRDPV-------------------- 61 (255)
T ss_pred cceeeeccCCCCCCCCCEEEECCCCCchhHHHHHHHHHhhCCeEEEECCCCCCCCCCCCC--------------------
Confidence 4556664333 2467999999999999999999999999999999999999999975321
Q ss_pred CCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCchH
Q 013006 225 GDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPK 304 (451)
Q Consensus 225 ~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~ 304 (451)
++++++++|+.+++++++.++++|+||||||++++.+|.++|++|+++|++++.+..... ....
T Consensus 62 ------------~~~~~~~~d~~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~~---~~~~- 125 (255)
T PRK10673 62 ------------MNYPAMAQDLLDTLDALQIEKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHV---RRHD- 125 (255)
T ss_pred ------------CCHHHHHHHHHHHHHHcCCCceEEEEECHHHHHHHHHHHhCHhhcceEEEEecCCCCccc---hhhH-
Confidence 699999999999999999999999999999999999999999999999999875421100 0000
Q ss_pred HhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhH---HHHHHHHHhcCC
Q 013006 305 LARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAA---AASFASIMFAPQ 381 (451)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 381 (451)
.....+.................+...+. ................. ..........
T Consensus 126 --------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 184 (255)
T PRK10673 126 --------------EIFAAINAVSEAGATTRQQAAAIMRQHLN-----EEGVIQFLLKSFVDGEWRFNVPVLWDQYPH-- 184 (255)
T ss_pred --------------HHHHHHHHhhhcccccHHHHHHHHHHhcC-----CHHHHHHHHhcCCcceeEeeHHHHHHhHHH--
Confidence 00000000000000001111111111100 00000000001100000 0000000000
Q ss_pred CCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 382 GNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 382 ~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
......++.+++|+|+|+|++|.+++++..+.+++.+|++++.+++++||++++|+|+++++.|
T Consensus 185 -----~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~l 248 (255)
T PRK10673 185 -----IVGWEKIPAWPHPALFIRGGNSPYVTEAYRDDLLAQFPQARAHVIAGAGHWVHAEKPDAVLRAI 248 (255)
T ss_pred -----HhCCcccCCCCCCeEEEECCCCCCCCHHHHHHHHHhCCCcEEEEeCCCCCeeeccCHHHHHHHH
Confidence 0011235678999999999999999999999999999999999999999999999999998876
No 17
>PRK06489 hypothetical protein; Provisional
Probab=99.97 E-value=3.2e-29 Score=246.82 Aligned_cols=275 Identities=17% Similarity=0.228 Sum_probs=163.5
Q ss_pred cCCeEEEEeecCCCC-----CCCCcEEEecCCCCChhcHH--HHHHhh--------cCCceEEEEcCCCCCCCCCCCCCC
Q 013006 142 KPKFNVHYEKAGCEN-----VNSPPVLFLPGFGVGSFHYE--KQLKDL--------GKDYRAWAIDFLGQGMSLPDEDPT 206 (451)
Q Consensus 142 ~~g~~l~y~~~g~~~-----~~~p~VlllHG~~~~~~~~~--~~~~~L--------~~~~~Vi~~D~rG~G~S~~~~~~~ 206 (451)
.+|.+++|...|..+ ..+|+|||+||++++...|. .+.+.| +++|+||++|+||||.|+.+....
T Consensus 47 ~~g~~i~y~~~G~~~~~~~~~~gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~~ 126 (360)
T PRK06489 47 LPELRLHYTTLGTPHRNADGEIDNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDGL 126 (360)
T ss_pred cCCceEEEEecCCCCcccccCCCCeEEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcCC
Confidence 568999999999531 01689999999999988886 454444 678999999999999997543211
Q ss_pred CCCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHH-HHhCCCCEE-EEEeCcchHHHHHHHHhCCCccceE
Q 013006 207 PRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFI-KEVIREPVY-VVGNSLGGFVAVYFAACNPHLVKGV 284 (451)
Q Consensus 207 ~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll-~~l~~~~v~-lvGhS~GG~val~~A~~~P~~v~~l 284 (451)
... + ..|+++++++++..++ +++++++++ |+||||||++|+.+|.++|++|+++
T Consensus 127 ~~~--------------~----------~~~~~~~~a~~~~~~l~~~lgi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~L 182 (360)
T PRK06489 127 RAA--------------F----------PRYDYDDMVEAQYRLVTEGLGVKHLRLILGTSMGGMHAWMWGEKYPDFMDAL 182 (360)
T ss_pred CCC--------------C----------CcccHHHHHHHHHHHHHHhcCCCceeEEEEECHHHHHHHHHHHhCchhhhee
Confidence 000 0 0279999999988854 889999985 8999999999999999999999999
Q ss_pred EEeccCCCCCCCCCCCCchH-Hhhh---cCCC-CCCC-ChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHH
Q 013006 285 TLLNATPFWGFSPNPIRSPK-LARI---LPWS-GTFP-LPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFT 358 (451)
Q Consensus 285 vl~~~~~~~~~~~~~~~~~~-~~~~---~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (451)
|++++.+............. .... ..+. ..+. .+............ ....... ...............+.
T Consensus 183 VLi~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~ 258 (360)
T PRK06489 183 MPMASQPTEMSGRNWMWRRMLIESIRNDPAWNNGNYTTQPPSLKRANPMFAI-ATSGGTL---AYQAQAPTRAAADKLVD 258 (360)
T ss_pred eeeccCcccccHHHHHHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHHHH-HHhCCHH---HHHHhcCChHHHHHHHH
Confidence 99998642100000000000 0000 0010 0000 01111111100000 0000000 00000000000011111
Q ss_pred HHHhhccChhHHHHHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHH--HHHHHHCCCCcEEEeCCC--
Q 013006 359 RILETTQHPAAAASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWG--LQVKRQVPEAPYYEISPA-- 434 (451)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~--~~l~~~lp~~~~~~i~~~-- 434 (451)
........... ..+...... ... .+..+.+.+|++|||+|+|++|.++|++.+ +++++.+|++++++++++
T Consensus 259 ~~~~~~~~~~~-~~~~~~~~~-~~~---~d~~~~L~~I~~PvLvI~G~~D~~~p~~~~~~~~la~~ip~a~l~~i~~a~~ 333 (360)
T PRK06489 259 ERLAAPVTADA-NDFLYQWDS-SRD---YNPSPDLEKIKAPVLAINSADDERNPPETGVMEAALKRVKHGRLVLIPASPE 333 (360)
T ss_pred HHHHhhhhcCH-HHHHHHHHH-hhc---cChHHHHHhCCCCEEEEecCCCcccChhhHHHHHHHHhCcCCeEEEECCCCC
Confidence 11111111101 111111110 001 123456678999999999999999999875 789999999999999996
Q ss_pred --CCCccccChHHHHhhh
Q 013006 435 --GHCPHDEVPEVCSLCL 450 (451)
Q Consensus 435 --gH~~~~e~p~~v~~~I 450 (451)
||+++ |+|++|++.|
T Consensus 334 ~~GH~~~-e~P~~~~~~i 350 (360)
T PRK06489 334 TRGHGTT-GSAKFWKAYL 350 (360)
T ss_pred CCCcccc-cCHHHHHHHH
Confidence 99997 8999999876
No 18
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.97 E-value=3.5e-29 Score=233.87 Aligned_cols=250 Identities=20% Similarity=0.267 Sum_probs=163.9
Q ss_pred EEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCC
Q 013006 147 VHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGD 226 (451)
Q Consensus 147 l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~ 226 (451)
++|+..|+.++++|+|||+||+++++..|..++..|.++|+|+++|+||||.|......
T Consensus 1 ~~~~~~~~~~~~~~~iv~lhG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~--------------------- 59 (257)
T TIGR03611 1 MHYELHGPPDADAPVVVLSSGLGGSGSYWAPQLDVLTQRFHVVTYDHRGTGRSPGELPP--------------------- 59 (257)
T ss_pred CEEEEecCCCCCCCEEEEEcCCCcchhHHHHHHHHHHhccEEEEEcCCCCCCCCCCCcc---------------------
Confidence 47888887656789999999999999999999999998999999999999999753221
Q ss_pred CCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCchHHh
Q 013006 227 KAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLA 306 (451)
Q Consensus 227 ~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~ 306 (451)
.++++++++++.+++++++.++++++||||||++++.+|.++|++|+++|++++..... +.......
T Consensus 60 ---------~~~~~~~~~~~~~~i~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~----~~~~~~~~ 126 (257)
T TIGR03611 60 ---------GYSIAHMADDVLQLLDALNIERFHFVGHALGGLIGLQLALRYPERLLSLVLINAWSRPD----PHTRRCFD 126 (257)
T ss_pred ---------cCCHHHHHHHHHHHHHHhCCCcEEEEEechhHHHHHHHHHHChHHhHHheeecCCCCCC----hhHHHHHH
Confidence 27999999999999999999999999999999999999999999999999998753210 00000000
Q ss_pred hhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhcc-ChhHHHHHHHHHhcCCCCCc
Q 013006 307 RILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQ-HPAAAASFASIMFAPQGNLS 385 (451)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 385 (451)
....+................. ... .+.................... .......+.... ..
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~----~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~- 188 (257)
T TIGR03611 127 VRIALLQHAGPEAYVHAQALFL----YPA--------DWISENAARLAADEAHALAHFPGKANVLRRINALE-----AF- 188 (257)
T ss_pred HHHHHHhccCcchhhhhhhhhh----ccc--------cHhhccchhhhhhhhhcccccCccHHHHHHHHHHH-----cC-
Confidence 0000000000000000000000 000 0000000000000000000000 000000000000 11
Q ss_pred hhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 386 FREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 386 ~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
+....+.++++|+++++|++|.++|++.++++.+.+++++++.++++||++++++|+++++.|
T Consensus 189 --~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i 251 (257)
T TIGR03611 189 --DVSARLDRIQHPVLLIANRDDMLVPYTQSLRLAAALPNAQLKLLPYGGHASNVTDPETFNRAL 251 (257)
T ss_pred --CcHHHhcccCccEEEEecCcCcccCHHHHHHHHHhcCCceEEEECCCCCCccccCHHHHHHHH
Confidence 122456678999999999999999999999999999999999999999999999999999876
No 19
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.96 E-value=1.2e-28 Score=241.88 Aligned_cols=254 Identities=15% Similarity=0.192 Sum_probs=162.1
Q ss_pred ccceeeecCCeEEEEeecCCCC-CCCCcEEEecCCCCChhc-HHHHHHhhcC-CceEEEEcCCCCCCCCCCCCCCCCCCC
Q 013006 135 TSCFWEWKPKFNVHYEKAGCEN-VNSPPVLFLPGFGVGSFH-YEKQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKE 211 (451)
Q Consensus 135 ~~~~~~~~~g~~l~y~~~g~~~-~~~p~VlllHG~~~~~~~-~~~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~ 211 (451)
...+....+|.+|+|..+++.+ +.+++|||+||++.+... |..++..|++ +|+|+++|+||||.|+.....
T Consensus 62 ~~~~~~~~~g~~l~~~~~~p~~~~~~~~iv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~------ 135 (349)
T PLN02385 62 EESYEVNSRGVEIFSKSWLPENSRPKAAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDYPGFGLSEGLHGY------ 135 (349)
T ss_pred eeeeEEcCCCCEEEEEEEecCCCCCCeEEEEECCCCCccchHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCC------
Confidence 3445556799999999998753 345789999999888654 6888899965 899999999999999753211
Q ss_pred CCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCC------CEEEEEeCcchHHHHHHHHhCCCccceEE
Q 013006 212 GDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIRE------PVYVVGNSLGGFVAVYFAACNPHLVKGVT 285 (451)
Q Consensus 212 ~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~------~v~lvGhS~GG~val~~A~~~P~~v~~lv 285 (451)
..+++++++|+.++++.+..+ +++|+||||||++++.+|.++|++|+++|
T Consensus 136 ------------------------~~~~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glV 191 (349)
T PLN02385 136 ------------------------IPSFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAI 191 (349)
T ss_pred ------------------------cCCHHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhhee
Confidence 148899999999999887543 79999999999999999999999999999
Q ss_pred EeccCCCCCCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHH--HHHHHHHhhcCCCChHHHHHHHH-h
Q 013006 286 LLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESI--AEVLKQVYADHATNVDTVFTRIL-E 362 (451)
Q Consensus 286 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~ 362 (451)
++++...... ....... ...+...+.......... .......+... ......... .
T Consensus 192 Li~p~~~~~~--~~~~~~~----------------~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 250 (349)
T PLN02385 192 LVAPMCKIAD--DVVPPPL----------------VLQILILLANLLPKAKLVPQKDLAELAFRDL---KKRKMAEYNVI 250 (349)
T ss_pred Eecccccccc--cccCchH----------------HHHHHHHHHHHCCCceecCCCccccccccCH---HHHHHhhcCcc
Confidence 9998542110 0000000 000000000000000000 00000000000 000000000 0
Q ss_pred hccChhHHHHHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHC--CCCcEEEeCCCCCCccc
Q 013006 363 TTQHPAAAASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQV--PEAPYYEISPAGHCPHD 440 (451)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~l--p~~~~~~i~~~gH~~~~ 440 (451)
..............+. ...+....+.++++|+|+|+|++|.++|++.++.+.+.+ +++++++++++||+++.
T Consensus 251 ~~~~~~~~~~~~~~l~------~~~~~~~~l~~i~~P~Lii~G~~D~vv~~~~~~~l~~~~~~~~~~l~~i~~~gH~l~~ 324 (349)
T PLN02385 251 AYKDKPRLRTAVELLR------TTQEIEMQLEEVSLPLLILHGEADKVTDPSVSKFLYEKASSSDKKLKLYEDAYHSILE 324 (349)
T ss_pred eeCCCcchHHHHHHHH------HHHHHHHhcccCCCCEEEEEeCCCCccChHHHHHHHHHcCCCCceEEEeCCCeeeccc
Confidence 0000000001111110 012334456789999999999999999999999999887 56899999999999999
Q ss_pred cChHH
Q 013006 441 EVPEV 445 (451)
Q Consensus 441 e~p~~ 445 (451)
|+|++
T Consensus 325 e~p~~ 329 (349)
T PLN02385 325 GEPDE 329 (349)
T ss_pred CCChh
Confidence 99987
No 20
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.96 E-value=3.4e-29 Score=240.36 Aligned_cols=253 Identities=30% Similarity=0.452 Sum_probs=158.0
Q ss_pred CCCCcEEEecCCCCChhcHHHHHHhhcCC--ceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccc
Q 013006 157 VNSPPVLFLPGFGVGSFHYEKQLKDLGKD--YRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASE 234 (451)
Q Consensus 157 ~~~p~VlllHG~~~~~~~~~~~~~~L~~~--~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 234 (451)
.++++||++|||+++..+|+.++..|.+. ++|+++|++|+|.++..+...
T Consensus 56 ~~~~pvlllHGF~~~~~~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~~~~---------------------------- 107 (326)
T KOG1454|consen 56 KDKPPVLLLHGFGASSFSWRRVVPLLSKAKGLRVLAIDLPGHGYSSPLPRGP---------------------------- 107 (326)
T ss_pred CCCCcEEEeccccCCcccHhhhccccccccceEEEEEecCCCCcCCCCCCCC----------------------------
Confidence 46899999999999999999999999876 999999999999655433322
Q ss_pred cccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEec---cCCCCCCCCCCCCchHHhhhcC-
Q 013006 235 LAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLN---ATPFWGFSPNPIRSPKLARILP- 310 (451)
Q Consensus 235 ~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~---~~~~~~~~~~~~~~~~~~~~~~- 310 (451)
.|+..++++.+..+..+...+++++||||+||++|+.+|+.+|+.|+++|+++ +... .... ..........
T Consensus 108 -~y~~~~~v~~i~~~~~~~~~~~~~lvghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~---~~~~-~~~~~~~~~~~ 182 (326)
T KOG1454|consen 108 -LYTLRELVELIRRFVKEVFVEPVSLVGHSLGGIVALKAAAYYPETVDSLVLLDLLGPPVY---STPK-GIKGLRRLLDK 182 (326)
T ss_pred -ceehhHHHHHHHHHHHhhcCcceEEEEeCcHHHHHHHHHHhCcccccceeeecccccccc---cCCc-chhHHHHhhhh
Confidence 28999999999999999999999999999999999999999999999999554 4321 1110 0000000000
Q ss_pred CCCC--CCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCCCCCchhH
Q 013006 311 WSGT--FPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSFRE 388 (451)
Q Consensus 311 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (451)
.... ...+........ .....+...+...+.+.....+..................+..++...... ...
T Consensus 183 ~~~~~~~~~p~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 254 (326)
T KOG1454|consen 183 FLSALELLIPLSLTEPVR------LVSEGLLRCLKVVYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELLGF--DEN 254 (326)
T ss_pred hccHhhhcCccccccchh------heeHhhhcceeeeccccccchhhhhhheecccccchhhhheeeEEEeccCc--cch
Confidence 0000 000000000000 000000000000111111111111111111000111111111111111110 122
Q ss_pred HhhhccCCC-CCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 389 ALSRCQMNG-VPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 389 ~~~~l~~i~-~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
....++++. ||+|+++|++|+++|.+.++.+++.+|++++++++++||++|+|+|+++++.|
T Consensus 255 ~~~~~~~i~~~pvlii~G~~D~~~p~~~~~~~~~~~pn~~~~~I~~~gH~~h~e~Pe~~~~~i 317 (326)
T KOG1454|consen 255 LLSLIKKIWKCPVLIIWGDKDQIVPLELAEELKKKLPNAELVEIPGAGHLPHLERPEEVAALL 317 (326)
T ss_pred HHHhhccccCCceEEEEcCcCCccCHHHHHHHHhhCCCceEEEeCCCCcccccCCHHHHHHHH
Confidence 333455666 99999999999999999999999999999999999999999999999999887
No 21
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.96 E-value=6.2e-28 Score=223.87 Aligned_cols=245 Identities=25% Similarity=0.309 Sum_probs=163.2
Q ss_pred EEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCC
Q 013006 146 NVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFG 225 (451)
Q Consensus 146 ~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~ 225 (451)
+++|...|+. +..|+|||+||++.+...|..++..|.++|+|+++|+||||.|.....
T Consensus 1 ~~~~~~~g~~-~~~~~li~~hg~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~--------------------- 58 (251)
T TIGR02427 1 RLHYRLDGAA-DGAPVLVFINSLGTDLRMWDPVLPALTPDFRVLRYDKRGHGLSDAPEG--------------------- 58 (251)
T ss_pred CceEEeecCC-CCCCeEEEEcCcccchhhHHHHHHHhhcccEEEEecCCCCCCCCCCCC---------------------
Confidence 3678777753 246889999999999999999999999899999999999999964321
Q ss_pred CCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCchHH
Q 013006 226 DKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKL 305 (451)
Q Consensus 226 ~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~ 305 (451)
.++++++++++.++++.++.++++++||||||++++.+|.++|++|+++|++++....... ....
T Consensus 59 ----------~~~~~~~~~~~~~~i~~~~~~~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~-----~~~~ 123 (251)
T TIGR02427 59 ----------PYSIEDLADDVLALLDHLGIERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGTP-----ESWN 123 (251)
T ss_pred ----------CCCHHHHHHHHHHHHHHhCCCceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCccccCch-----hhHH
Confidence 1799999999999999999999999999999999999999999999999999875321100 0000
Q ss_pred hhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCC-ChHHHHHHHHhhccChhHHHHHHHHHhcCCCCC
Q 013006 306 ARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHAT-NVDTVFTRILETTQHPAAAASFASIMFAPQGNL 384 (451)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (451)
....... ... .... ....+..++..... ........+........ ...+...... .
T Consensus 124 ~~~~~~~-~~~----~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~----~ 180 (251)
T TIGR02427 124 ARIAAVR-AEG----LAAL-------------ADAVLERWFTPGFREAHPARLDLYRNMLVRQP-PDGYAGCCAA----I 180 (251)
T ss_pred HHHhhhh-hcc----HHHH-------------HHHHHHHHcccccccCChHHHHHHHHHHHhcC-HHHHHHHHHH----H
Confidence 0000000 000 0000 00011111110000 00011111111000000 0001100000 0
Q ss_pred chhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 385 SFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 385 ~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
...+....+.++++|+++++|++|.++|++..+.+.+.+++.++++++++||++++++|+++++.|
T Consensus 181 ~~~~~~~~~~~~~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i 246 (251)
T TIGR02427 181 RDADFRDRLGAIAVPTLCIAGDQDGSTPPELVREIADLVPGARFAEIRGAGHIPCVEQPEAFNAAL 246 (251)
T ss_pred hcccHHHHhhhcCCCeEEEEeccCCcCChHHHHHHHHhCCCceEEEECCCCCcccccChHHHHHHH
Confidence 011223445678999999999999999999999999999999999999999999999999998875
No 22
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.96 E-value=5.7e-28 Score=223.48 Aligned_cols=235 Identities=18% Similarity=0.249 Sum_probs=151.2
Q ss_pred CcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccccCH
Q 013006 160 PPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSV 239 (451)
Q Consensus 160 p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~ 239 (451)
|+|||+||++++...|..++..|+++|+|+++|+||||.|..... +++
T Consensus 5 ~~iv~~HG~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~~--------------------------------~~~ 52 (245)
T TIGR01738 5 VHLVLIHGWGMNAEVFRCLDEELSAHFTLHLVDLPGHGRSRGFGP--------------------------------LSL 52 (245)
T ss_pred ceEEEEcCCCCchhhHHHHHHhhccCeEEEEecCCcCccCCCCCC--------------------------------cCH
Confidence 789999999999999999999999899999999999999864321 578
Q ss_pred HHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCchHHhhhcCCCCCCCChH
Q 013006 240 DLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPA 319 (451)
Q Consensus 240 ~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (451)
+++++++..++ .++++++||||||.+++.+|.++|++++++|++++.+.+.... .|.... .+.
T Consensus 53 ~~~~~~~~~~~----~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~------------~~~~~~-~~~ 115 (245)
T TIGR01738 53 ADAAEAIAAQA----PDPAIWLGWSLGGLVALHIAATHPDRVRALVTVASSPCFSARE------------DWPEGI-KPD 115 (245)
T ss_pred HHHHHHHHHhC----CCCeEEEEEcHHHHHHHHHHHHCHHhhheeeEecCCcccccCC------------cccccC-CHH
Confidence 88888876543 3799999999999999999999999999999999865321110 000000 001
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHH-HHhhcCCCC-hHHHHHHHHhhccChhHHHHHHHHHhcCCCCCchhHHhhhccCCC
Q 013006 320 SVRKLIEFIWQKISDPESIAEVLK-QVYADHATN-VDTVFTRILETTQHPAAAASFASIMFAPQGNLSFREALSRCQMNG 397 (451)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 397 (451)
....+...+... .......+.. ..+...... ....+.........+.. ..+....... ...+....+.+++
T Consensus 116 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~----~~~~~~~~l~~i~ 188 (245)
T TIGR01738 116 VLTGFQQQLSDD--YQRTIERFLALQTLGTPTARQDARALKQTLLARPTPNV-QVLQAGLEIL----ATVDLRQPLQNIS 188 (245)
T ss_pred HHHHHHHHhhhh--HHHHHHHHHHHHHhcCCccchHHHHHHHHhhccCCCCH-HHHHHHHHHh----hcccHHHHHhcCC
Confidence 111111100000 0000111111 001111000 00111111111111100 1111111100 0112344567899
Q ss_pred CCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 398 VPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 398 ~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
+|+++|+|++|.+++++..+.+.+.+|++++.+++++||++++|+|+++++.|
T Consensus 189 ~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i 241 (245)
T TIGR01738 189 VPFLRLYGYLDGLVPAKVVPYLDKLAPHSELYIFAKAAHAPFLSHAEAFCALL 241 (245)
T ss_pred CCEEEEeecCCcccCHHHHHHHHHhCCCCeEEEeCCCCCCccccCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999886
No 23
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.96 E-value=3.1e-28 Score=222.06 Aligned_cols=228 Identities=25% Similarity=0.391 Sum_probs=155.6
Q ss_pred EEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccccCHHH
Q 013006 162 VLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDL 241 (451)
Q Consensus 162 VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~ 241 (451)
|||+||++++...|..+++.|+++|+|+++|+||+|.|....... .+++++
T Consensus 1 vv~~hG~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~-----------------------------~~~~~~ 51 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAEALARGYRVIAFDLPGHGRSDPPPDYS-----------------------------PYSIED 51 (228)
T ss_dssp EEEE-STTTTGGGGHHHHHHHHTTSEEEEEECTTSTTSSSHSSGS-----------------------------GGSHHH
T ss_pred eEEECCCCCCHHHHHHHHHHHhCCCEEEEEecCCccccccccccC-----------------------------Ccchhh
Confidence 799999999999999999999889999999999999997644211 279999
Q ss_pred HHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCchHHhhhcCCCCCCCChHHH
Q 013006 242 WQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASV 321 (451)
Q Consensus 242 ~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (451)
+++|+.+++++++.++++++|||+||.+++.++.++|++|+++|++++.... ..... ....+..+
T Consensus 52 ~~~~l~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~---------~~~~~------~~~~~~~~ 116 (228)
T PF12697_consen 52 YAEDLAELLDALGIKKVILVGHSMGGMIALRLAARYPDRVKGLVLLSPPPPL---------PDSPS------RSFGPSFI 116 (228)
T ss_dssp HHHHHHHHHHHTTTSSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESESSSH---------HHHHC------HHHHHHHH
T ss_pred hhhhhhhcccccccccccccccccccccccccccccccccccceeecccccc---------ccccc------ccccchhh
Confidence 9999999999999999999999999999999999999999999999986420 00000 00000111
Q ss_pred HHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCCCCCchhHHhhhccCCCCCEE
Q 013006 322 RKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSFREALSRCQMNGVPIC 401 (451)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvL 401 (451)
..+........ .......+.... ........... ....+....... ....+....++++++|++
T Consensus 117 ~~~~~~~~~~~--~~~~~~~~~~~~------~~~~~~~~~~~-----~~~~~~~~~~~~---~~~~~~~~~~~~~~~pvl 180 (228)
T PF12697_consen 117 RRLLAWRSRSL--RRLASRFFYRWF------DGDEPEDLIRS-----SRRALAEYLRSN---LWQADLSEALPRIKVPVL 180 (228)
T ss_dssp HHHHHHHHHHH--HHHHHHHHHHHH------THHHHHHHHHH-----HHHHHHHHHHHH---HHHHHHHHHHHGSSSEEE
T ss_pred hhhhhcccccc--cccccccccccc------ccccccccccc-----cccccccccccc---cccccccccccccCCCeE
Confidence 11111100000 000001111111 01111111111 111111111000 111344456677899999
Q ss_pred EEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhh
Q 013006 402 LIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLC 449 (451)
Q Consensus 402 ii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~ 449 (451)
+++|++|.+++.+..+++.+.++++++++++++||++++|+|++|+++
T Consensus 181 ~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~a 228 (228)
T PF12697_consen 181 VIHGEDDPIVPPESAEELADKLPNAELVVIPGAGHFLFLEQPDEVAEA 228 (228)
T ss_dssp EEEETTSSSSHHHHHHHHHHHSTTEEEEEETTSSSTHHHHSHHHHHHH
T ss_pred EeecCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCccHHHCHHHHhcC
Confidence 999999999999999999999999999999999999999999999874
No 24
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.96 E-value=6.1e-28 Score=236.93 Aligned_cols=284 Identities=15% Similarity=0.128 Sum_probs=168.3
Q ss_pred cCCeEEEEeecCCCC-CCCCcEEEecCCCCChh-----------cHHHHH----HhhcCCceEEEEcCCC--CCCCCCCC
Q 013006 142 KPKFNVHYEKAGCEN-VNSPPVLFLPGFGVGSF-----------HYEKQL----KDLGKDYRAWAIDFLG--QGMSLPDE 203 (451)
Q Consensus 142 ~~g~~l~y~~~g~~~-~~~p~VlllHG~~~~~~-----------~~~~~~----~~L~~~~~Vi~~D~rG--~G~S~~~~ 203 (451)
.+|++|+|..+|+.+ ..+++|||+||++++.. .|+.++ ..+.++|+|+++|+|| ||.|.+..
T Consensus 13 ~~~~~~~y~~~g~~~~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~~ 92 (351)
T TIGR01392 13 LSDVRVAYETYGTLNAERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPSS 92 (351)
T ss_pred cCCceEEEEeccccCCCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCCC
Confidence 468999999999643 23579999999999764 378876 3346789999999999 56654321
Q ss_pred CCCCCCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCC-EEEEEeCcchHHHHHHHHhCCCccc
Q 013006 204 DPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREP-VYVVGNSLGGFVAVYFAACNPHLVK 282 (451)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~-v~lvGhS~GG~val~~A~~~P~~v~ 282 (451)
..... ..|+- +...++++++++++..+++++++++ ++++||||||++++.+|.++|++|+
T Consensus 93 ~~~~~-----------~~~~~--------~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~G~S~Gg~ia~~~a~~~p~~v~ 153 (351)
T TIGR01392 93 INPGG-----------RPYGS--------DFPLITIRDDVKAQKLLLDHLGIEQIAAVVGGSMGGMQALEWAIDYPERVR 153 (351)
T ss_pred CCCCC-----------CcCCC--------CCCCCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhh
Confidence 11000 00100 0013799999999999999999999 9999999999999999999999999
Q ss_pred eEEEeccCCCCCCCCCCCCchHHh-hh---cCCCC-CCCC---hHHHHHHHHHH-HHhcCChHHHHHHHHHHhhcCCCC-
Q 013006 283 GVTLLNATPFWGFSPNPIRSPKLA-RI---LPWSG-TFPL---PASVRKLIEFI-WQKISDPESIAEVLKQVYADHATN- 352 (451)
Q Consensus 283 ~lvl~~~~~~~~~~~~~~~~~~~~-~~---~~~~~-~~~~---~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~- 352 (451)
++|++++.+........ ...... .+ ..|.. .+.. +.........+ ......... +...+......
T Consensus 154 ~lvl~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~----~~~~f~~~~~~~ 228 (351)
T TIGR01392 154 AIVVLATSARHSAWCIA-FNEVQRQAILADPNWNDGDYYEDGQPDRGLALARMLAHLTYRSEES----MAERFGRAPQSG 228 (351)
T ss_pred eEEEEccCCcCCHHHHH-HHHHHHHHHHhCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCHHH----HHHHhCcCcccc
Confidence 99999986532110000 000000 00 01110 0000 10000001110 000111111 11222111100
Q ss_pred ------------hHHHHH----HHHhhccChhHHHHHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHH
Q 013006 353 ------------VDTVFT----RILETTQHPAAAASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWG 416 (451)
Q Consensus 353 ------------~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~ 416 (451)
.+.... .+... ..+.........+..........+..+.+++|++|+|+|+|++|.++|++.+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~~~~~~~~~l~~~d~~~~~~~~~~~l~~I~~P~Lvi~G~~D~~~p~~~~ 307 (351)
T TIGR01392 229 ESPASGFDTRFQVESYLRYQGDKFVDR-FDANSYLYLTRALDTHDLGRGRGSLTEALSRIKAPFLVVSITSDWLFPPAES 307 (351)
T ss_pred cccccccCccchHHHHHHHHHHHHHhh-cCcchHHHHHHHHHhcCCcCCCCCHHHHHhhCCCCEEEEEeCCccccCHHHH
Confidence 001100 11111 1111111111111111000001234566788999999999999999999999
Q ss_pred HHHHHHCCCCcEE-----EeCCCCCCccccChHHHHhhh
Q 013006 417 LQVKRQVPEAPYY-----EISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 417 ~~l~~~lp~~~~~-----~i~~~gH~~~~e~p~~v~~~I 450 (451)
+.+++.+|++++. +++++||++++|+|++|++.|
T Consensus 308 ~~~a~~i~~~~~~v~~~~i~~~~GH~~~le~p~~~~~~l 346 (351)
T TIGR01392 308 RELAKALPAAGLRVTYVEIESPYGHDAFLVETDQVEELI 346 (351)
T ss_pred HHHHHHHhhcCCceEEEEeCCCCCcchhhcCHHHHHHHH
Confidence 9999999998765 567899999999999999876
No 25
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.96 E-value=6.2e-28 Score=236.13 Aligned_cols=257 Identities=16% Similarity=0.176 Sum_probs=157.0
Q ss_pred CCeEEEEeecCCCCCCCCcEEEecCCCCChh------------cHHHHHH---hh-cCCceEEEEcCCCCCCCCCCCCCC
Q 013006 143 PKFNVHYEKAGCENVNSPPVLFLPGFGVGSF------------HYEKQLK---DL-GKDYRAWAIDFLGQGMSLPDEDPT 206 (451)
Q Consensus 143 ~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~------------~~~~~~~---~L-~~~~~Vi~~D~rG~G~S~~~~~~~ 206 (451)
+|++|+|+..|+ .++|+||+||+..+.. .|..++. .| +++|+||++|+||||.|.. .+
T Consensus 44 ~~~~l~y~~~G~---~~~p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~~--~~- 117 (343)
T PRK08775 44 EDLRLRYELIGP---AGAPVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGADGSLD--VP- 117 (343)
T ss_pred CCceEEEEEecc---CCCCEEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCCCCCCC--CC-
Confidence 689999999985 2456777777666655 6888886 57 5789999999999998742 11
Q ss_pred CCCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCE-EEEEeCcchHHHHHHHHhCCCccceEE
Q 013006 207 PRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPV-YVVGNSLGGFVAVYFAACNPHLVKGVT 285 (451)
Q Consensus 207 ~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v-~lvGhS~GG~val~~A~~~P~~v~~lv 285 (451)
++++++++|+.+++++++++++ +||||||||++++.+|.++|++|+++|
T Consensus 118 ------------------------------~~~~~~a~dl~~ll~~l~l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~Lv 167 (343)
T PRK08775 118 ------------------------------IDTADQADAIALLLDALGIARLHAFVGYSYGALVGLQFASRHPARVRTLV 167 (343)
T ss_pred ------------------------------CCHHHHHHHHHHHHHHcCCCcceEEEEECHHHHHHHHHHHHChHhhheEE
Confidence 6889999999999999999775 799999999999999999999999999
Q ss_pred EeccCCCCCCCCCCCCchHHhhhcCC----CCCCCChHHHHHHHH-HHHHhcCChHHHHHHHHHHhhcCCCC----hHHH
Q 013006 286 LLNATPFWGFSPNPIRSPKLARILPW----SGTFPLPASVRKLIE-FIWQKISDPESIAEVLKQVYADHATN----VDTV 356 (451)
Q Consensus 286 l~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 356 (451)
++++.+... + ........... ............... ............. ..+...... ....
T Consensus 168 Li~s~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 238 (343)
T PRK08775 168 VVSGAHRAH----P-YAAAWRALQRRAVALGQLQCAEKHGLALARQLAMLSYRTPEEFE----ERFDAPPEVINGRVRVA 238 (343)
T ss_pred EECccccCC----H-HHHHHHHHHHHHHHcCCCCCCchhHHHHHHHHHHHHcCCHHHHH----HHhCCCccccCCCccch
Confidence 999864210 0 00000000000 000000000000000 0000011111111 111111000 0000
Q ss_pred HHHHHhh----ccChhHHHHHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHC-CCCcEEEe
Q 013006 357 FTRILET----TQHPAAAASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQV-PEAPYYEI 431 (451)
Q Consensus 357 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~l-p~~~~~~i 431 (451)
...++.. .........+....... ......+.++++|+|+|+|++|.++|++..+++.+.+ |+++++++
T Consensus 239 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~p~a~l~~i 312 (343)
T PRK08775 239 AEDYLDAAGAQYVARTPVNAYLRLSESI------DLHRVDPEAIRVPTVVVAVEGDRLVPLADLVELAEGLGPRGSLRVL 312 (343)
T ss_pred HHHHHHHHHHHHHHhcChhHHHHHHHHH------hhcCCChhcCCCCeEEEEeCCCEeeCHHHHHHHHHHcCCCCeEEEE
Confidence 0100000 00000000011110000 0001125679999999999999999999999998888 79999999
Q ss_pred CC-CCCCccccChHHHHhhh
Q 013006 432 SP-AGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 432 ~~-~gH~~~~e~p~~v~~~I 450 (451)
++ +||++++|+|++|++.|
T Consensus 313 ~~~aGH~~~lE~Pe~~~~~l 332 (343)
T PRK08775 313 RSPYGHDAFLKETDRIDAIL 332 (343)
T ss_pred eCCccHHHHhcCHHHHHHHH
Confidence 85 99999999999999886
No 26
>PRK07581 hypothetical protein; Validated
Probab=99.96 E-value=5.1e-28 Score=236.59 Aligned_cols=279 Identities=14% Similarity=0.130 Sum_probs=159.3
Q ss_pred cCCeEEEEeecCCCCCCC-CcEEEecCCCCChhcHHHHH---Hhhc-CCceEEEEcCCCCCCCCCCCCC-CCCCCCCCch
Q 013006 142 KPKFNVHYEKAGCENVNS-PPVLFLPGFGVGSFHYEKQL---KDLG-KDYRAWAIDFLGQGMSLPDEDP-TPRSKEGDST 215 (451)
Q Consensus 142 ~~g~~l~y~~~g~~~~~~-p~VlllHG~~~~~~~~~~~~---~~L~-~~~~Vi~~D~rG~G~S~~~~~~-~~~~~~~~~~ 215 (451)
.+|++|+|...|+.++.+ |+|||+||++.+...|..++ +.|. ++|+||++|+||||.|..+... .+.+
T Consensus 23 ~~~~~l~y~~~G~~~~~~~~~vll~~~~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~------ 96 (339)
T PRK07581 23 LPDARLAYKTYGTLNAAKDNAILYPTWYSGTHQDNEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFN------ 96 (339)
T ss_pred cCCceEEEEecCccCCCCCCEEEEeCCCCCCcccchhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCC------
Confidence 358999999999643333 55667777777777776654 4674 5799999999999999754321 0100
Q ss_pred hhhhccccCCCCCCccccccccCHHHHHHHHHH----HHHHhCCCC-EEEEEeCcchHHHHHHHHhCCCccceEEEeccC
Q 013006 216 EEKNFLWGFGDKAQPWASELAYSVDLWQDQVCY----FIKEVIREP-VYVVGNSLGGFVAVYFAACNPHLVKGVTLLNAT 290 (451)
Q Consensus 216 ~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~----ll~~l~~~~-v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~ 290 (451)
+.+ |....+++|+.. +++++++++ ++||||||||++|+.+|.+||++|+++|++++.
T Consensus 97 --------~~~----------~~~~~~~~~~~~~~~~l~~~lgi~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~ 158 (339)
T PRK07581 97 --------AAR----------FPHVTIYDNVRAQHRLLTEKFGIERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGT 158 (339)
T ss_pred --------CCC----------CCceeHHHHHHHHHHHHHHHhCCCceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecC
Confidence 000 111224444443 778899999 579999999999999999999999999999976
Q ss_pred CCCCCCCCCCC-chHHh----hhcCCCCCC-C-Ch-HHHHHHHHHHHHhcCChHHHHHHHHHH-hhcCC-CChHHHHHHH
Q 013006 291 PFWGFSPNPIR-SPKLA----RILPWSGTF-P-LP-ASVRKLIEFIWQKISDPESIAEVLKQV-YADHA-TNVDTVFTRI 360 (451)
Q Consensus 291 ~~~~~~~~~~~-~~~~~----~~~~~~~~~-~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~ 360 (451)
+.. .+.... ..... .-..|.... . .+ ................+ .++... +.... ...+......
T Consensus 159 ~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 232 (339)
T PRK07581 159 AKT--TPHNFVFLEGLKAALTADPAFNGGWYAEPPERGLRAHARVYAGWGFSQ----AFYRQELWRAMGYASLEDFLVGF 232 (339)
T ss_pred CCC--CHHHHHHHHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHHHHHHHHhHH----HHHHhhhccccChhhHHHHHHHH
Confidence 421 000000 00000 001111100 0 11 11111111110000001 111100 00000 0001111111
Q ss_pred Hhhc---cChhHHHHHH-HHHhcC-CCCCc-hhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCC-
Q 013006 361 LETT---QHPAAAASFA-SIMFAP-QGNLS-FREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISP- 433 (451)
Q Consensus 361 ~~~~---~~~~~~~~~~-~~~~~~-~~~~~-~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~- 433 (451)
.... ..+....... ...... ..... ..+....+.++++|||+|+|++|.++|+...+.+++.+|+++++++++
T Consensus 233 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~L~~I~~PtLvI~G~~D~~~p~~~~~~l~~~ip~a~l~~i~~~ 312 (339)
T PRK07581 233 WEGNFLPRDPNNLLAMLWTWQRGDISRNPAYGGDLAAALGSITAKTFVMPISTDLYFPPEDCEAEAALIPNAELRPIESI 312 (339)
T ss_pred HHHhhcccCcccHHHHHHHhhhcccccCcccCCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCeEEEeCCC
Confidence 1111 1111111111 111100 00000 013455677899999999999999999999999999999999999998
Q ss_pred CCCCccccChHHHHhhh
Q 013006 434 AGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 434 ~gH~~~~e~p~~v~~~I 450 (451)
+||++++|+|++++..|
T Consensus 313 ~GH~~~~~~~~~~~~~~ 329 (339)
T PRK07581 313 WGHLAGFGQNPADIAFI 329 (339)
T ss_pred CCccccccCcHHHHHHH
Confidence 89999999999999775
No 27
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.96 E-value=1.8e-27 Score=221.37 Aligned_cols=231 Identities=20% Similarity=0.258 Sum_probs=144.1
Q ss_pred CCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccccC
Q 013006 159 SPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYS 238 (451)
Q Consensus 159 ~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s 238 (451)
+|+|||+||+++++..|..+++.|+ +|+|+++|+||||.|..+.. .+
T Consensus 2 ~p~vvllHG~~~~~~~w~~~~~~l~-~~~vi~~D~~G~G~S~~~~~--------------------------------~~ 48 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDWQPVGEALP-DYPRLYIDLPGHGGSAAISV--------------------------------DG 48 (242)
T ss_pred CCEEEEECCCCCChHHHHHHHHHcC-CCCEEEecCCCCCCCCCccc--------------------------------cC
Confidence 4789999999999999999999995 79999999999999975321 48
Q ss_pred HHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCc-cceEEEeccCCCCCCCCCCCCchHHhhhcCCCCCCCC
Q 013006 239 VDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHL-VKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPL 317 (451)
Q Consensus 239 ~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (451)
++++++|+.+++++++.+++++|||||||.+++.+|.++|+. |++++++++.+. ..+ ..... ..+...
T Consensus 49 ~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg~va~~~a~~~~~~~v~~lvl~~~~~~--~~~-----~~~~~-~~~~~~--- 117 (242)
T PRK11126 49 FADVSRLLSQTLQSYNILPYWLVGYSLGGRIAMYYACQGLAGGLCGLIVEGGNPG--LQN-----AEERQ-ARWQND--- 117 (242)
T ss_pred HHHHHHHHHHHHHHcCCCCeEEEEECHHHHHHHHHHHhCCcccccEEEEeCCCCC--CCC-----HHHHH-HHHhhh---
Confidence 899999999999999999999999999999999999999764 999999986531 110 00000 000000
Q ss_pred hHHHHHHHHHHHHhcCChHHHHHHHHHHhhcC--CCChHHHHHHHHhhccChhHHHHHHHHHhcCCCCCchhHHhhhccC
Q 013006 318 PASVRKLIEFIWQKISDPESIAEVLKQVYADH--ATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSFREALSRCQM 395 (451)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 395 (451)
..... .. ........+..++... ..........+......... ........... .....+....+.+
T Consensus 118 ~~~~~--------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~l~~ 186 (242)
T PRK11126 118 RQWAQ--------RF-RQEPLEQVLADWYQQPVFASLNAEQRQQLVAKRSNNNG-AAVAAMLEATS-LAKQPDLRPALQA 186 (242)
T ss_pred HHHHH--------Hh-ccCcHHHHHHHHHhcchhhccCccHHHHHHHhcccCCH-HHHHHHHHhcC-cccCCcHHHHhhc
Confidence 00000 00 0000111111111000 00001111111111110000 11111111110 0011133456678
Q ss_pred CCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 396 NGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 396 i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
+++|+++|+|++|+.+. .+++. +++++.+++++||++++|+|+++++.|
T Consensus 187 i~~P~lii~G~~D~~~~-----~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i 235 (242)
T PRK11126 187 LTFPFYYLCGERDSKFQ-----ALAQQ-LALPLHVIPNAGHNAHRENPAAFAASL 235 (242)
T ss_pred cCCCeEEEEeCCcchHH-----HHHHH-hcCeEEEeCCCCCchhhhChHHHHHHH
Confidence 99999999999998552 23333 378999999999999999999999876
No 28
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.96 E-value=3.3e-27 Score=233.71 Aligned_cols=289 Identities=15% Similarity=0.173 Sum_probs=166.3
Q ss_pred CCeEEEEeecCCCCC-CCCcEEEecCCCCChhc-------------HHHHH----HhhcCCceEEEEcCCCC-CCCCCCC
Q 013006 143 PKFNVHYEKAGCENV-NSPPVLFLPGFGVGSFH-------------YEKQL----KDLGKDYRAWAIDFLGQ-GMSLPDE 203 (451)
Q Consensus 143 ~g~~l~y~~~g~~~~-~~p~VlllHG~~~~~~~-------------~~~~~----~~L~~~~~Vi~~D~rG~-G~S~~~~ 203 (451)
+|++|+|..+|..++ .+|+|||+||++++... |..++ ..+.++|+||++|++|+ |.|..+.
T Consensus 31 ~~~~~~y~~~G~~~~~~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~~~ 110 (379)
T PRK00175 31 PPVELAYETYGTLNADRSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTGPS 110 (379)
T ss_pred CCceEEEEeccccCCCCCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCCCC
Confidence 578999999996432 36899999999999874 67776 23377899999999993 5553322
Q ss_pred CCCCCCCCCCchhhhhccccCCCCCCccccc-cccCHHHHHHHHHHHHHHhCCCC-EEEEEeCcchHHHHHHHHhCCCcc
Q 013006 204 DPTPRSKEGDSTEEKNFLWGFGDKAQPWASE-LAYSVDLWQDQVCYFIKEVIREP-VYVVGNSLGGFVAVYFAACNPHLV 281 (451)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~-~~~s~~~~a~dv~~ll~~l~~~~-v~lvGhS~GG~val~~A~~~P~~v 281 (451)
...+.. ..++... ..|+++++++++.++++++++++ ++++||||||++++.+|.++|++|
T Consensus 111 ~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v 172 (379)
T PRK00175 111 SINPDT------------------GKPYGSDFPVITIRDWVRAQARLLDALGITRLAAVVGGSMGGMQALEWAIDYPDRV 172 (379)
T ss_pred CCCCCC------------------CCcccCCCCcCCHHHHHHHHHHHHHHhCCCCceEEEEECHHHHHHHHHHHhChHhh
Confidence 110000 0001000 12899999999999999999999 589999999999999999999999
Q ss_pred ceEEEeccCCCCCCCCCCCCchHHhhh---cCCCCC-C----CChHHHHHHHHHH-HHhcCChHHHHHHHHHHhhcCCC-
Q 013006 282 KGVTLLNATPFWGFSPNPIRSPKLARI---LPWSGT-F----PLPASVRKLIEFI-WQKISDPESIAEVLKQVYADHAT- 351 (451)
Q Consensus 282 ~~lvl~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-~----~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~- 351 (451)
+++|++++.+................+ ..|... + ..+..-....... .........+...+.........
T Consensus 173 ~~lvl~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~~~~~~~~ 252 (379)
T PRK00175 173 RSALVIASSARLSAQNIAFNEVARQAILADPDWHGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGRELQSGELP 252 (379)
T ss_pred hEEEEECCCcccCHHHHHHHHHHHHHHHhCCCCCCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCccccccccc
Confidence 999999986531110000000000011 011100 0 0000000000100 00011111111111100000000
Q ss_pred -------ChHHHHH----HHHhhccChhHHHHHHHHHhcCC-CCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHH
Q 013006 352 -------NVDTVFT----RILETTQHPAAAASFASIMFAPQ-GNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQV 419 (451)
Q Consensus 352 -------~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l 419 (451)
....... .+.... .+.............. ......+....+.+|++|+|+|+|++|.++|++..+++
T Consensus 253 ~~~~~~~~~~~~l~~~~~~~~~~~-d~~~~~~~~~~~~~~d~~~~~~~d~~~~l~~I~~PtLvI~G~~D~~~p~~~~~~l 331 (379)
T PRK00175 253 FGFDVEFQVESYLRYQGDKFVERF-DANSYLYLTRALDYFDPARGRGGDLAAALARIKARFLVVSFTSDWLFPPARSREI 331 (379)
T ss_pred cCCCccchHHHHHHHHHHHHhhcc-CchHHHHHHHHHHhccccCCCCCCHHHHHhcCCCCEEEEEECCccccCHHHHHHH
Confidence 0001000 011111 1111111111111100 00000124566788999999999999999999999999
Q ss_pred HHHCCCC----cEEEeC-CCCCCccccChHHHHhhh
Q 013006 420 KRQVPEA----PYYEIS-PAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 420 ~~~lp~~----~~~~i~-~~gH~~~~e~p~~v~~~I 450 (451)
++.++++ ++.+++ ++||++++|+|++|++.|
T Consensus 332 a~~i~~a~~~~~l~~i~~~~GH~~~le~p~~~~~~L 367 (379)
T PRK00175 332 VDALLAAGADVSYAEIDSPYGHDAFLLDDPRYGRLV 367 (379)
T ss_pred HHHHHhcCCCeEEEEeCCCCCchhHhcCHHHHHHHH
Confidence 9999987 677775 899999999999999876
No 29
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.96 E-value=1.9e-27 Score=231.73 Aligned_cols=258 Identities=13% Similarity=0.152 Sum_probs=160.9
Q ss_pred CCccceeeecCCeEEEEeecCCCC--CCCCcEEEecCCCCCh-hcHHHHHHhhcC-CceEEEEcCCCCCCCCCCCCCCCC
Q 013006 133 PITSCFWEWKPKFNVHYEKAGCEN--VNSPPVLFLPGFGVGS-FHYEKQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPR 208 (451)
Q Consensus 133 ~~~~~~~~~~~g~~l~y~~~g~~~--~~~p~VlllHG~~~~~-~~~~~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~ 208 (451)
..+..+++..||.+|+|+.+++.. +.+++|||+||++.+. ..|..+...|++ +|+|+++|+||||.|......
T Consensus 31 ~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~~~~--- 107 (330)
T PLN02298 31 KGSKSFFTSPRGLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQSTAIFLAQMGFACFALDLEGHGRSEGLRAY--- 107 (330)
T ss_pred ccccceEEcCCCCEEEEEEEecCCCCCCceEEEEEcCCCCCcceehhHHHHHHHhCCCEEEEecCCCCCCCCCcccc---
Confidence 345667888899999999887642 2356799999998664 356677777864 899999999999999642211
Q ss_pred CCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCC------CCEEEEEeCcchHHHHHHHHhCCCccc
Q 013006 209 SKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIR------EPVYVVGNSLGGFVAVYFAACNPHLVK 282 (451)
Q Consensus 209 ~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~------~~v~lvGhS~GG~val~~A~~~P~~v~ 282 (451)
..+++.+++|+..+++.+.. .+++|+||||||.+++.++.++|++|+
T Consensus 108 ---------------------------~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~ 160 (330)
T PLN02298 108 ---------------------------VPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFD 160 (330)
T ss_pred ---------------------------CCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccce
Confidence 15889999999999998853 379999999999999999999999999
Q ss_pred eEEEeccCCCCCCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHh
Q 013006 283 GVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILE 362 (451)
Q Consensus 283 ~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (451)
++|++++.........+ ..... . ...+............. . ..+ ....... ....+..
T Consensus 161 ~lvl~~~~~~~~~~~~~--~~~~~------------~-~~~~~~~~~~~~~~~~~-~----~~~-~~~~~~~-~~~~~~~ 218 (330)
T PLN02298 161 GAVLVAPMCKISDKIRP--PWPIP------------Q-ILTFVARFLPTLAIVPT-A----DLL-EKSVKVP-AKKIIAK 218 (330)
T ss_pred eEEEecccccCCcccCC--chHHH------------H-HHHHHHHHCCCCccccC-C----Ccc-cccccCH-HHHHHHH
Confidence 99999985321100000 00000 0 00000000000000000 0 000 0000000 0000000
Q ss_pred h----ccChhHHHHHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCC--CCcEEEeCCCCC
Q 013006 363 T----TQHPAAAASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVP--EAPYYEISPAGH 436 (451)
Q Consensus 363 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp--~~~~~~i~~~gH 436 (451)
. +........+..... ........+.++++|+|+|+|++|.++|++.++.+++.++ ++++++++++||
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~------~~~~~~~~l~~i~~PvLii~G~~D~ivp~~~~~~l~~~i~~~~~~l~~~~~a~H 292 (330)
T PLN02298 219 RNPMRYNGKPRLGTVVELLR------VTDYLGKKLKDVSIPFIVLHGSADVVTDPDVSRALYEEAKSEDKTIKIYDGMMH 292 (330)
T ss_pred hCccccCCCccHHHHHHHHH------HHHHHHHhhhhcCCCEEEEecCCCCCCCHHHHHHHHHHhccCCceEEEcCCcEe
Confidence 0 000000000000000 0012334567889999999999999999999999988874 689999999999
Q ss_pred CccccChHHHHh
Q 013006 437 CPHDEVPEVCSL 448 (451)
Q Consensus 437 ~~~~e~p~~v~~ 448 (451)
.+++++|+.+.+
T Consensus 293 ~~~~e~pd~~~~ 304 (330)
T PLN02298 293 SLLFGEPDENIE 304 (330)
T ss_pred eeecCCCHHHHH
Confidence 999999976544
No 30
>PHA02857 monoglyceride lipase; Provisional
Probab=99.96 E-value=3.6e-27 Score=223.91 Aligned_cols=248 Identities=15% Similarity=0.151 Sum_probs=155.6
Q ss_pred ceeeecCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcC-CceEEEEcCCCCCCCCCCCCCCCCCCCCCch
Q 013006 137 CFWEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKEGDST 215 (451)
Q Consensus 137 ~~~~~~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~ 215 (451)
.++..+||.+|+|..+-+.+...+.|+|+||++.++..|..+++.|++ +|+|+++|+||||.|......
T Consensus 3 ~~~~~~~g~~l~~~~~~~~~~~~~~v~llHG~~~~~~~~~~~~~~l~~~g~~via~D~~G~G~S~~~~~~---------- 72 (276)
T PHA02857 3 NCMFNLDNDYIYCKYWKPITYPKALVFISHGAGEHSGRYEELAENISSLGILVFSHDHIGHGRSNGEKMM---------- 72 (276)
T ss_pred ceeecCCCCEEEEEeccCCCCCCEEEEEeCCCccccchHHHHHHHHHhCCCEEEEccCCCCCCCCCccCC----------
Confidence 356667999999998877543456677779999999999999999965 799999999999999642110
Q ss_pred hhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHh----CCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCC
Q 013006 216 EEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEV----IREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATP 291 (451)
Q Consensus 216 ~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l----~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~ 291 (451)
..++.++++|+..+++.+ ..++++|+||||||++++.+|.++|++++++|++++..
T Consensus 73 --------------------~~~~~~~~~d~~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~ 132 (276)
T PHA02857 73 --------------------IDDFGVYVRDVVQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLV 132 (276)
T ss_pred --------------------cCCHHHHHHHHHHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhCccccceEEEecccc
Confidence 135666677777766654 34689999999999999999999999999999999853
Q ss_pred CCCCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhcc-ChhHH
Q 013006 292 FWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQ-HPAAA 370 (451)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 370 (451)
... . . .....+........ .............+. ............... .....
T Consensus 133 ~~~----~--~-------------~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 187 (276)
T PHA02857 133 NAE----A--V-------------PRLNLLAAKLMGIF---YPNKIVGKLCPESVS---RDMDEVYKYQYDPLVNHEKIK 187 (276)
T ss_pred ccc----c--c-------------cHHHHHHHHHHHHh---CCCCccCCCCHhhcc---CCHHHHHHHhcCCCccCCCcc
Confidence 210 0 0 00000000000000 000000000000000 000000000000000 00000
Q ss_pred HHHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHC-CCCcEEEeCCCCCCccccChH
Q 013006 371 ASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQV-PEAPYYEISPAGHCPHDEVPE 444 (451)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~l-p~~~~~~i~~~gH~~~~e~p~ 444 (451)
..+...... ...+....+.++++|||+|+|++|.++|++.++++.+.+ +++++.+++++||.++.|+++
T Consensus 188 ~~~~~~~~~-----~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~e~~~ 257 (276)
T PHA02857 188 AGFASQVLK-----ATNKVRKIIPKIKTPILILQGTNNEISDVSGAYYFMQHANCNREIKIYEGAKHHLHKETDE 257 (276)
T ss_pred HHHHHHHHH-----HHHHHHHhcccCCCCEEEEecCCCCcCChHHHHHHHHHccCCceEEEeCCCcccccCCchh
Confidence 000000000 012334567789999999999999999999999998887 468999999999999999874
No 31
>PRK10749 lysophospholipase L2; Provisional
Probab=99.95 E-value=5.3e-26 Score=221.22 Aligned_cols=129 Identities=19% Similarity=0.231 Sum_probs=106.7
Q ss_pred ceeeecCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhh-cCCceEEEEcCCCCCCCCCCCCCCCCCCCCCch
Q 013006 137 CFWEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDL-GKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDST 215 (451)
Q Consensus 137 ~~~~~~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L-~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~ 215 (451)
..+...+|.+++|..+++.+ .+++|||+||++.+...|..++..| ..+|+|+++|+||||.|+........
T Consensus 33 ~~~~~~~g~~l~~~~~~~~~-~~~~vll~HG~~~~~~~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~------- 104 (330)
T PRK10749 33 AEFTGVDDIPIRFVRFRAPH-HDRVVVICPGRIESYVKYAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPHR------- 104 (330)
T ss_pred eEEEcCCCCEEEEEEccCCC-CCcEEEEECCccchHHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCCc-------
Confidence 45556789999999998643 4578999999999998999999877 56899999999999999753221100
Q ss_pred hhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHh----CCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCC
Q 013006 216 EEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEV----IREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATP 291 (451)
Q Consensus 216 ~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l----~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~ 291 (451)
...++++++++|+..+++++ +..+++++||||||.+++.+|.++|++|+++|+++|..
T Consensus 105 ------------------~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~ 166 (330)
T PRK10749 105 ------------------GHVERFNDYVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMF 166 (330)
T ss_pred ------------------CccccHHHHHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchh
Confidence 00158999999999999987 66899999999999999999999999999999998753
No 32
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.95 E-value=1.5e-26 Score=219.42 Aligned_cols=265 Identities=19% Similarity=0.193 Sum_probs=160.5
Q ss_pred cCCeEEEEeecCCCCCCCCcEEEecCCCCChhc-HHHHHHhhcC-CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhh
Q 013006 142 KPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFH-YEKQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKN 219 (451)
Q Consensus 142 ~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~-~~~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~ 219 (451)
.+|.++.|...+... .+++|||+||++++... |..+...|.+ +|+|+++|+||||.|..+.....
T Consensus 9 ~~~~~~~~~~~~~~~-~~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~------------ 75 (288)
T TIGR01250 9 VDGGYHLFTKTGGEG-EKIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDE------------ 75 (288)
T ss_pred CCCCeEEEEeccCCC-CCCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccc------------
Confidence 346678888777532 36899999998665544 5555566665 79999999999999975432110
Q ss_pred ccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCC
Q 013006 220 FLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNP 299 (451)
Q Consensus 220 ~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~ 299 (451)
.++++++++++.+++++++.++++++||||||.+++.+|.++|++|+++|++++.... +
T Consensus 76 ----------------~~~~~~~~~~~~~~~~~~~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~-----~ 134 (288)
T TIGR01250 76 ----------------LWTIDYFVDELEEVREKLGLDKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLDSA-----P 134 (288)
T ss_pred ----------------cccHHHHHHHHHHHHHHcCCCcEEEEEeehHHHHHHHHHHhCccccceeeEecccccc-----h
Confidence 1689999999999999999999999999999999999999999999999999875310 0
Q ss_pred CCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhh---cCCCChHHHHHHHHhhccChhHHHHHHHH
Q 013006 300 IRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYA---DHATNVDTVFTRILETTQHPAAAASFASI 376 (451)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (451)
........... ... ......+.................+...+. ................. . ..+...
T Consensus 135 ~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~ 205 (288)
T TIGR01250 135 EYVKELNRLRK---ELP-PEVRAAIKRCEASGDYDNPEYQEAVEVFYHHLLCRTRKWPEALKHLKSGM-N----TNVYNI 205 (288)
T ss_pred HHHHHHHHHHh---hcC-hhHHHHHHHHHhccCcchHHHHHHHHHHHHHhhcccccchHHHHHHhhcc-C----HHHHhc
Confidence 00000000000 000 000000000000000001111111111110 00000001111110000 0 000000
Q ss_pred Hhc-----CCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 377 MFA-----PQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 377 ~~~-----~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
+.. ........+....+.++++|+++++|++|.+ +++..+.+++.++++++++++++||++++|+|+++++.|
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~-~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i 283 (288)
T TIGR01250 206 MQGPNEFTITGNLKDWDITDKLSEIKVPTLLTVGEFDTM-TPEAAREMQELIAGSRLVVFPDGSHMTMIEDPEVYFKLL 283 (288)
T ss_pred ccCCccccccccccccCHHHHhhccCCCEEEEecCCCcc-CHHHHHHHHHhccCCeEEEeCCCCCCcccCCHHHHHHHH
Confidence 000 0001111233456678999999999999985 677888899999999999999999999999999999886
No 33
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.95 E-value=6.7e-27 Score=221.13 Aligned_cols=252 Identities=18% Similarity=0.179 Sum_probs=157.1
Q ss_pred CCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhc-CCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhcc
Q 013006 143 PKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLG-KDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFL 221 (451)
Q Consensus 143 ~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~-~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~ 221 (451)
+|-+++|.+-+ .++|+|||+||++.+...|..++..|. ++|+|+++|+||||.|......
T Consensus 5 ~~~~~~~~~~~---~~~p~vvliHG~~~~~~~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~~---------------- 65 (273)
T PLN02211 5 NGEEVTDMKPN---RQPPHFVLIHGISGGSWCWYKIRCLMENSGYKVTCIDLKSAGIDQSDADS---------------- 65 (273)
T ss_pred ccccccccccc---CCCCeEEEECCCCCCcCcHHHHHHHHHhCCCEEEEecccCCCCCCCCccc----------------
Confidence 56777777732 357899999999999999999999996 4899999999999987532211
Q ss_pred ccCCCCCCccccccccCHHHHHHHHHHHHHHhC-CCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCC
Q 013006 222 WGFGDKAQPWASELAYSVDLWQDQVCYFIKEVI-REPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPI 300 (451)
Q Consensus 222 w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~-~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~ 300 (451)
.++++++++++.++++++. .++++||||||||++++.++.++|++|+++|++++.... ...
T Consensus 66 --------------~~~~~~~~~~l~~~i~~l~~~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~~~~----~g~ 127 (273)
T PLN02211 66 --------------VTTFDEYNKPLIDFLSSLPENEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAATMLK----LGF 127 (273)
T ss_pred --------------CCCHHHHHHHHHHHHHhcCCCCCEEEEEECchHHHHHHHHHhChhheeEEEEeccccCC----CCC
Confidence 1699999999999999985 589999999999999999999999999999999874320 000
Q ss_pred CchHHhhhcCCCCCCCChHHHHHHHHHHHH--hc---CChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHH
Q 013006 301 RSPKLARILPWSGTFPLPASVRKLIEFIWQ--KI---SDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFAS 375 (451)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (451)
... .. +...++............+. .. .......+.....+.... . +.... +......+...
T Consensus 128 ~~~--~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~-~~~~~~~~~~~----- 194 (273)
T PLN02211 128 QTD--ED---MKDGVPDLSEFGDVYELGFGLGPDQPPTSAIIKKEFRRKILYQMS-P-QEDST-LAAMLLRPGPI----- 194 (273)
T ss_pred CHH--HH---HhccccchhhhccceeeeeccCCCCCCceeeeCHHHHHHHHhcCC-C-HHHHH-HHHHhcCCcCc-----
Confidence 000 00 00000000000000000000 00 000000011111111110 0 00000 00000000000
Q ss_pred HHhcCCCCCchhHHhhhccCC-CCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhhC
Q 013006 376 IMFAPQGNLSFREALSRCQMN-GVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCLL 451 (451)
Q Consensus 376 ~~~~~~~~~~~~~~~~~l~~i-~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~Il 451 (451)
..+..........++ ++|+++|+|++|..+|++.++.+.+.+++++++.++ +||.+++++|+++++.|+
T Consensus 195 ------~~~~~~~~~~~~~~~~~vP~l~I~g~~D~~ip~~~~~~m~~~~~~~~~~~l~-~gH~p~ls~P~~~~~~i~ 264 (273)
T PLN02211 195 ------LALRSARFEEETGDIDKVPRVYIKTLHDHVVKPEQQEAMIKRWPPSQVYELE-SDHSPFFSTPFLLFGLLI 264 (273)
T ss_pred ------cccccccccccccccCccceEEEEeCCCCCCCHHHHHHHHHhCCccEEEEEC-CCCCccccCHHHHHHHHH
Confidence 000000111112334 789999999999999999999999999999999996 899999999999998763
No 34
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.95 E-value=9.7e-26 Score=224.19 Aligned_cols=274 Identities=17% Similarity=0.282 Sum_probs=162.3
Q ss_pred eeeecCCe--EEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCch
Q 013006 138 FWEWKPKF--NVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDST 215 (451)
Q Consensus 138 ~~~~~~g~--~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~ 215 (451)
++...+|. ++++....+. +++|+|||+||++.+...|...+..|+++|+|+++|+||||.|+.+.... .
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~-~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~vi~~D~rG~G~S~~~~~~~--~------ 153 (402)
T PLN02894 83 WFRSASNEPRFINTVTFDSK-EDAPTLVMVHGYGASQGFFFRNFDALASRFRVIAIDQLGWGGSSRPDFTC--K------ 153 (402)
T ss_pred ceecccCcCCeEEEEEecCC-CCCCEEEEECCCCcchhHHHHHHHHHHhCCEEEEECCCCCCCCCCCCccc--c------
Confidence 33334443 6666555432 36799999999999999999999999889999999999999997542110 0
Q ss_pred hhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCC
Q 013006 216 EEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGF 295 (451)
Q Consensus 216 ~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~ 295 (451)
......+.+++++.++++.++.++++|+||||||.+++.+|.++|++|+++|++++.++...
T Consensus 154 ------------------~~~~~~~~~~~~i~~~~~~l~~~~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~~~~~~ 215 (402)
T PLN02894 154 ------------------STEETEAWFIDSFEEWRKAKNLSNFILLGHSFGGYVAAKYALKHPEHVQHLILVGPAGFSSE 215 (402)
T ss_pred ------------------cHHHHHHHHHHHHHHHHHHcCCCCeEEEEECHHHHHHHHHHHhCchhhcEEEEECCccccCC
Confidence 00012345678888999999999999999999999999999999999999999998643221
Q ss_pred CCCCCCchHHhhhc-CCCCCCCChHHHHHHHHHHHHhcCC------------hHHHHHHHHHHhhcCC------CChHHH
Q 013006 296 SPNPIRSPKLARIL-PWSGTFPLPASVRKLIEFIWQKISD------------PESIAEVLKQVYADHA------TNVDTV 356 (451)
Q Consensus 296 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~------~~~~~~ 356 (451)
... ......... .|. ..+...++..... +..........+.... ......
T Consensus 216 ~~~--~~~~~~~~~~~~~---------~~~~~~~~~~~~~p~~~~~~~gp~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~ 284 (402)
T PLN02894 216 SDD--KSEWLTKFRATWK---------GAVLNHLWESNFTPQKIIRGLGPWGPNLVRRYTTARFGAHSTGDILSEEESKL 284 (402)
T ss_pred cch--hHHHHhhcchhHH---------HHHHHHHhhcCCCHHHHHHhccchhHHHHHHHHHHHhhhcccccccCcchhhH
Confidence 110 000010000 000 0000000000000 1111111111111110 000111
Q ss_pred H-HHHHhhccChhHHHHHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCC-CCcEEEeCCC
Q 013006 357 F-TRILETTQHPAAAASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVP-EAPYYEISPA 434 (451)
Q Consensus 357 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp-~~~~~~i~~~ 434 (451)
+ +.+................+.... .....+....+.++++|+++|+|++|.+.+ ....++.+..+ .+++++++++
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~I~vP~liI~G~~D~i~~-~~~~~~~~~~~~~~~~~~i~~a 362 (402)
T PLN02894 285 LTDYVYHTLAAKASGELCLKYIFSFG-AFARKPLLESASEWKVPTTFIYGRHDWMNY-EGAVEARKRMKVPCEIIRVPQG 362 (402)
T ss_pred HHHHHHHhhcCCCchHHHHHHhccCc-hhhcchHhhhcccCCCCEEEEEeCCCCCCc-HHHHHHHHHcCCCCcEEEeCCC
Confidence 1 111111111111111111111111 112234556678899999999999998765 55555555554 5889999999
Q ss_pred CCCccccChHHHHhhhC
Q 013006 435 GHCPHDEVPEVCSLCLL 451 (451)
Q Consensus 435 gH~~~~e~p~~v~~~Il 451 (451)
||++++|+|++|++.|+
T Consensus 363 GH~~~~E~P~~f~~~l~ 379 (402)
T PLN02894 363 GHFVFLDNPSGFHSAVL 379 (402)
T ss_pred CCeeeccCHHHHHHHHH
Confidence 99999999999998763
No 35
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.95 E-value=9.3e-26 Score=223.42 Aligned_cols=247 Identities=21% Similarity=0.258 Sum_probs=162.7
Q ss_pred CCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccc
Q 013006 143 PKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLW 222 (451)
Q Consensus 143 ~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w 222 (451)
++.+++|...|++ ++++|||+||++++...|..++..|.++|+|+++|+||||.|......
T Consensus 117 ~~~~i~~~~~g~~--~~~~vl~~HG~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~----------------- 177 (371)
T PRK14875 117 GGRTVRYLRLGEG--DGTPVVLIHGFGGDLNNWLFNHAALAAGRPVIALDLPGHGASSKAVGA----------------- 177 (371)
T ss_pred cCcEEEEecccCC--CCCeEEEECCCCCccchHHHHHHHHhcCCEEEEEcCCCCCCCCCCCCC-----------------
Confidence 5788999988863 468999999999999999999999988899999999999999643221
Q ss_pred cCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCc
Q 013006 223 GFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRS 302 (451)
Q Consensus 223 ~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~ 302 (451)
++++++++++..+++.++.++++++|||+||.+++.+|.++|++++++|++++...... ...
T Consensus 178 --------------~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~~----~~~ 239 (371)
T PRK14875 178 --------------GSLDELAAAVLAFLDALGIERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAGLGPE----ING 239 (371)
T ss_pred --------------CCHHHHHHHHHHHHHhcCCccEEEEeechHHHHHHHHHHhCchheeEEEEECcCCcCcc----cch
Confidence 68999999999999999999999999999999999999999999999999987532110 000
Q ss_pred hHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhc-CC
Q 013006 303 PKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFA-PQ 381 (451)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 381 (451)
.....+... ..... +...+...+..........................+...... ..
T Consensus 240 ~~~~~~~~~----~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (371)
T PRK14875 240 DYIDGFVAA----ESRRE-----------------LKPVLELLFADPALVTRQMVEDLLKYKRLDGVDDALRALADALFA 298 (371)
T ss_pred hHHHHhhcc----cchhH-----------------HHHHHHHHhcChhhCCHHHHHHHHHHhccccHHHHHHHHHHHhcc
Confidence 000000000 00000 111111111110000011111111111101111111111100 00
Q ss_pred CCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 382 GNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 382 ~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
......+....+.++++|+|+++|++|.++|++..+.+ .+++++.+++++||++++++|+++++.|
T Consensus 299 ~~~~~~~~~~~l~~i~~Pvlii~g~~D~~vp~~~~~~l---~~~~~~~~~~~~gH~~~~e~p~~~~~~i 364 (371)
T PRK14875 299 GGRQRVDLRDRLASLAIPVLVIWGEQDRIIPAAHAQGL---PDGVAVHVLPGAGHMPQMEAAADVNRLL 364 (371)
T ss_pred CcccchhHHHHHhcCCCCEEEEEECCCCccCHHHHhhc---cCCCeEEEeCCCCCChhhhCHHHHHHHH
Confidence 11111234445677899999999999999998776544 3468899999999999999999999876
No 36
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.95 E-value=1e-25 Score=217.04 Aligned_cols=125 Identities=21% Similarity=0.224 Sum_probs=102.6
Q ss_pred ccceeeecCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhh-cCCceEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 013006 135 TSCFWEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDL-GKDYRAWAIDFLGQGMSLPDEDPTPRSKEGD 213 (451)
Q Consensus 135 ~~~~~~~~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L-~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~ 213 (451)
...++...+|.+|+|...|++ ++++|||+||++++...+ .+...+ .++|+|+++|+||||.|.......
T Consensus 5 ~~~~~~~~~~~~l~y~~~g~~--~~~~lvllHG~~~~~~~~-~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~------- 74 (306)
T TIGR01249 5 VSGYLNVSDNHQLYYEQSGNP--DGKPVVFLHGGPGSGTDP-GCRRFFDPETYRIVLFDQRGCGKSTPHACLE------- 74 (306)
T ss_pred cCCeEEcCCCcEEEEEECcCC--CCCEEEEECCCCCCCCCH-HHHhccCccCCEEEEECCCCCCCCCCCCCcc-------
Confidence 345677778999999999853 467899999987765543 334444 457999999999999997432211
Q ss_pred chhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCC
Q 013006 214 STEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATP 291 (451)
Q Consensus 214 ~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~ 291 (451)
.++.+++++|+..+++++++++++++||||||.+++.++.++|++|+++|++++..
T Consensus 75 ----------------------~~~~~~~~~dl~~l~~~l~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~ 130 (306)
T TIGR01249 75 ----------------------ENTTWDLVADIEKLREKLGIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFL 130 (306)
T ss_pred ----------------------cCCHHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHHChHhhhhheeecccc
Confidence 15788999999999999999999999999999999999999999999999998753
No 37
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.94 E-value=9.2e-26 Score=208.87 Aligned_cols=243 Identities=21% Similarity=0.293 Sum_probs=151.8
Q ss_pred CcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccccCH
Q 013006 160 PPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSV 239 (451)
Q Consensus 160 p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~ 239 (451)
|+|||+||++++...|..++..|+++|+|+++|+||+|.|..+.... .+++
T Consensus 2 ~~vv~~hG~~~~~~~~~~~~~~L~~~~~v~~~d~~g~G~s~~~~~~~-----------------------------~~~~ 52 (251)
T TIGR03695 2 PVLVFLHGFLGSGADWQALIELLGPHFRCLAIDLPGHGSSQSPDEIE-----------------------------RYDF 52 (251)
T ss_pred CEEEEEcCCCCchhhHHHHHHHhcccCeEEEEcCCCCCCCCCCCccC-----------------------------hhhH
Confidence 78999999999999999999999988999999999999996543211 2688
Q ss_pred HHHHHH-HHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCchHHhhhcCCCCCCCCh
Q 013006 240 DLWQDQ-VCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLP 318 (451)
Q Consensus 240 ~~~a~d-v~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (451)
++++++ +..+++.++.++++++|||+||.+++.+|.++|++|++++++++.+..... ......+....
T Consensus 53 ~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia~~~a~~~~~~v~~lil~~~~~~~~~~--------~~~~~~~~~~~--- 121 (251)
T TIGR03695 53 EEAAQDILATLLDQLGIEPFFLVGYSMGGRIALYYALQYPERVQGLILESGSPGLATE--------EERAARRQNDE--- 121 (251)
T ss_pred HHHHHHHHHHHHHHcCCCeEEEEEeccHHHHHHHHHHhCchheeeeEEecCCCCcCch--------Hhhhhhhhcch---
Confidence 999999 888889998899999999999999999999999999999999976421100 00000000000
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHH-HhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCCCCCchhHHhhhccCCC
Q 013006 319 ASVRKLIEFIWQKISDPESIAEVLKQ-VYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSFREALSRCQMNG 397 (451)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 397 (451)
.....+. . ............. .+.............+......... ......+.... .....+....+.+++
T Consensus 122 ~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~ 194 (251)
T TIGR03695 122 QLAQRFE----Q-EGLEAFLDDWYQQPLFASQKNLPPEQRQALRAKRLANNP-EGLAKMLRATG-LGKQPSLWPKLQALT 194 (251)
T ss_pred hhhhHHH----h-cCccHHHHHHhcCceeeecccCChHHhHHHHHhcccccc-hHHHHHHHHhh-hhcccchHHHhhCCC
Confidence 0000000 0 0000000000000 0000000001111111111000000 00111110000 000112234456789
Q ss_pred CCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 398 VPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 398 ~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
+|+++++|++|..++ ...+.+.+..+++++.+++++||++++|+|+++++.|
T Consensus 195 ~P~l~i~g~~D~~~~-~~~~~~~~~~~~~~~~~~~~~gH~~~~e~~~~~~~~i 246 (251)
T TIGR03695 195 IPVLYLCGEKDEKFV-QIAKEMQKLLPNLTLVIIANAGHNIHLENPEAFAKIL 246 (251)
T ss_pred CceEEEeeCcchHHH-HHHHHHHhcCCCCcEEEEcCCCCCcCccChHHHHHHH
Confidence 999999999998764 5677788889999999999999999999999999876
No 38
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.93 E-value=4.5e-24 Score=242.82 Aligned_cols=257 Identities=21% Similarity=0.276 Sum_probs=161.3
Q ss_pred EEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCC
Q 013006 147 VHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGD 226 (451)
Q Consensus 147 l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~ 226 (451)
++|...|.. +.+++|||+||++++...|..++..|.++|+|+++|+||||.|.........
T Consensus 1360 i~~~~~G~~-~~~~~vVllHG~~~s~~~w~~~~~~L~~~~rVi~~Dl~G~G~S~~~~~~~~~------------------ 1420 (1655)
T PLN02980 1360 IKVHEVGQN-AEGSVVLFLHGFLGTGEDWIPIMKAISGSARCISIDLPGHGGSKIQNHAKET------------------ 1420 (1655)
T ss_pred EEEEecCCC-CCCCeEEEECCCCCCHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCccccccc------------------
Confidence 566677742 2468999999999999999999999988899999999999999753221000
Q ss_pred CCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCchHHh
Q 013006 227 KAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLA 306 (451)
Q Consensus 227 ~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~ 306 (451)
.....++++++++++..++++++.++++|+||||||.+++.+|.++|++|+++|++++.+... .....
T Consensus 1421 -----~~~~~~si~~~a~~l~~ll~~l~~~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~~~-------~~~~~ 1488 (1655)
T PLN02980 1421 -----QTEPTLSVELVADLLYKLIEHITPGKVTLVGYSMGARIALYMALRFSDKIEGAVIISGSPGLK-------DEVAR 1488 (1655)
T ss_pred -----cccccCCHHHHHHHHHHHHHHhCCCCEEEEEECHHHHHHHHHHHhChHhhCEEEEECCCCccC-------chHHH
Confidence 001127899999999999999999999999999999999999999999999999998754211 00000
Q ss_pred hhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcC---CCChHHHHHHHHh-hccChhHHHHHHHHHhcCCC
Q 013006 307 RILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADH---ATNVDTVFTRILE-TTQHPAAAASFASIMFAPQG 382 (451)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 382 (451)
...... .......+. ......++..++... .......+..... ...... ...+...+....
T Consensus 1489 ~~~~~~----~~~~~~~l~---------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~- 1553 (1655)
T PLN02980 1489 KIRSAK----DDSRARMLI---------DHGLEIFLENWYSGELWKSLRNHPHFNKIVASRLLHKD-VPSLAKLLSDLS- 1553 (1655)
T ss_pred HHHhhh----hhHHHHHHH---------hhhHHHHHHHhccHHHhhhhccCHHHHHHHHHHHhcCC-HHHHHHHHHHhh-
Confidence 000000 000000000 000111111111100 0000011111111 010100 011111111000
Q ss_pred CCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCC------------CcEEEeCCCCCCccccChHHHHhhh
Q 013006 383 NLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPE------------APYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 383 ~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~------------~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
.....+..+.+.++++|+|+|+|++|..++ ..++++.+.+++ +++++++++||++++|+|+++++.|
T Consensus 1554 ~~~~~dl~~~L~~I~~PtLlI~Ge~D~~~~-~~a~~~~~~i~~a~~~~~~~~~~~a~lvvI~~aGH~~~lE~Pe~f~~~I 1632 (1655)
T PLN02980 1554 IGRQPSLWEDLKQCDTPLLLVVGEKDVKFK-QIAQKMYREIGKSKESGNDKGKEIIEIVEIPNCGHAVHLENPLPVIRAL 1632 (1655)
T ss_pred hcccchHHHHHhhCCCCEEEEEECCCCccH-HHHHHHHHHccccccccccccccceEEEEECCCCCchHHHCHHHHHHHH
Confidence 001123345678899999999999999875 667778877776 4799999999999999999999876
No 39
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.93 E-value=7.8e-24 Score=208.20 Aligned_cols=296 Identities=15% Similarity=0.116 Sum_probs=173.8
Q ss_pred CCeEEEEeecCCCCCC-CCcEEEecCCCCChhc-------------HHHHHHh---h-cCCceEEEEcCCCCCCCCCCC-
Q 013006 143 PKFNVHYEKAGCENVN-SPPVLFLPGFGVGSFH-------------YEKQLKD---L-GKDYRAWAIDFLGQGMSLPDE- 203 (451)
Q Consensus 143 ~g~~l~y~~~g~~~~~-~p~VlllHG~~~~~~~-------------~~~~~~~---L-~~~~~Vi~~D~rG~G~S~~~~- 203 (451)
+.++|.|+.+|..|++ .+.||+.|++.+++.. |+.++-. | .+.|.||++|..|-|.|..+.
T Consensus 39 ~~~~~~Y~t~G~ln~~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~ 118 (389)
T PRK06765 39 PDVQMGYETYGTLNRAKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNV 118 (389)
T ss_pred CCceEEEEeccccCCCCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCC
Confidence 4689999999986654 4788888999886532 6666632 4 346999999999998754321
Q ss_pred -CCCCCCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEE-EEEeCcchHHHHHHHHhCCCcc
Q 013006 204 -DPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVY-VVGNSLGGFVAVYFAACNPHLV 281 (451)
Q Consensus 204 -~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~-lvGhS~GG~val~~A~~~P~~v 281 (451)
...|.+.. ++....|+- +...++++++++++..+++++++++++ +|||||||++++.+|.++|++|
T Consensus 119 g~tgp~s~~----p~tg~~~~~--------~fP~~t~~d~~~~~~~ll~~lgi~~~~~vvG~SmGG~ial~~a~~~P~~v 186 (389)
T PRK06765 119 ITTGPASIN----PKTGKPYGM--------DFPVVTILDFVRVQKELIKSLGIARLHAVMGPSMGGMQAQEWAVHYPHMV 186 (389)
T ss_pred CCCCCCCCC----cCCCCccCC--------CCCcCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhh
Confidence 10000000 000001110 111389999999999999999999987 9999999999999999999999
Q ss_pred ceEEEeccCCCCCCCCCCCCch----HHhhhcCCCCCCC----Ch-HHHHHHHHHHHHhcCChHHHHHHHHHHhhcCC--
Q 013006 282 KGVTLLNATPFWGFSPNPIRSP----KLARILPWSGTFP----LP-ASVRKLIEFIWQKISDPESIAEVLKQVYADHA-- 350 (451)
Q Consensus 282 ~~lvl~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 350 (451)
+++|++++.+............ .+.....|..... .| ..+.............++.+...+.+......
T Consensus 187 ~~lv~ia~~~~~~~~~~~~~~~~~~~ai~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~~~f~r~~~~~~~~ 266 (389)
T PRK06765 187 ERMIGVIGNPQNDAWTSVNVLQNWAEAIRLDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYETTFPRNASIEVDP 266 (389)
T ss_pred heEEEEecCCCCChhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHHHHcCcCccccccc
Confidence 9999999865311100000000 0111112221110 11 11222222222222233332221111000000
Q ss_pred -------CChHHHHHHHHhh---ccChhHHHHHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHH
Q 013006 351 -------TNVDTVFTRILET---TQHPAAAASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVK 420 (451)
Q Consensus 351 -------~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~ 420 (451)
...+......... ..++.....+...+..........+..+.+.++++|+|+|+|++|.++|++..++++
T Consensus 267 ~~~~~~~~~~e~yl~~~~~~~~~~~Dan~~l~l~~a~~~~d~g~~~~dl~~~L~~I~~PtLvI~G~~D~l~p~~~~~~la 346 (389)
T PRK06765 267 YEKVSTLTSFEKEINKATYRRAELVDANHWLYLAKAVQLFDAGHGFSSLEEALSNIEANVLMIPCKQDLLQPPRYNYKMV 346 (389)
T ss_pred cccccchhhHHHHHHHHHHHhhhccChhhHHHHHHHHHhcCCccccCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHH
Confidence 0111111111111 111222222222222111111112456677889999999999999999999999999
Q ss_pred HHCC----CCcEEEeCC-CCCCccccChHHHHhhh
Q 013006 421 RQVP----EAPYYEISP-AGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 421 ~~lp----~~~~~~i~~-~gH~~~~e~p~~v~~~I 450 (451)
+.+| +++++++++ +||++++|+|+++++.|
T Consensus 347 ~~lp~~~~~a~l~~I~s~~GH~~~le~p~~~~~~I 381 (389)
T PRK06765 347 DILQKQGKYAEVYEIESINGHMAGVFDIHLFEKKI 381 (389)
T ss_pred HHhhhcCCCeEEEEECCCCCcchhhcCHHHHHHHH
Confidence 9886 588999985 89999999999999876
No 40
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.92 E-value=2.4e-23 Score=205.49 Aligned_cols=258 Identities=14% Similarity=0.145 Sum_probs=161.5
Q ss_pred CCccceeeecCCeEEEEeecCCCC-CCCCcEEEecCCCCChhcHHHHHHhhc-CCceEEEEcCCCCCCCCCCCCCCCCCC
Q 013006 133 PITSCFWEWKPKFNVHYEKAGCEN-VNSPPVLFLPGFGVGSFHYEKQLKDLG-KDYRAWAIDFLGQGMSLPDEDPTPRSK 210 (451)
Q Consensus 133 ~~~~~~~~~~~g~~l~y~~~g~~~-~~~p~VlllHG~~~~~~~~~~~~~~L~-~~~~Vi~~D~rG~G~S~~~~~~~~~~~ 210 (451)
...+..+...++..++|..+.+.. +..++|||+||++++...|..++..|+ ++|+|+++|+||||.|+.....
T Consensus 109 ~~~~~~~~~~~~~~l~~~~~~p~~~~~~~~Vl~lHG~~~~~~~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~~~----- 183 (395)
T PLN02652 109 RWATSLFYGARRNALFCRSWAPAAGEMRGILIIIHGLNEHSGRYLHFAKQLTSCGFGVYAMDWIGHGGSDGLHGY----- 183 (395)
T ss_pred eEEEEEEECCCCCEEEEEEecCCCCCCceEEEEECCchHHHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCC-----
Confidence 455566667788999999998742 345789999999999999999999995 5899999999999999743211
Q ss_pred CCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCC----CCEEEEEeCcchHHHHHHHHhCCC---ccce
Q 013006 211 EGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIR----EPVYVVGNSLGGFVAVYFAACNPH---LVKG 283 (451)
Q Consensus 211 ~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~----~~v~lvGhS~GG~val~~A~~~P~---~v~~ 283 (451)
..+++.+++|+..+++.+.. .+++++||||||.+++.++. +|+ ++++
T Consensus 184 -------------------------~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~g 237 (395)
T PLN02652 184 -------------------------VPSLDYVVEDTEAFLEKIRSENPGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEG 237 (395)
T ss_pred -------------------------CcCHHHHHHHHHHHHHHHHHhCCCCCEEEEEECHHHHHHHHHHh-ccCcccccce
Confidence 15788899999999988753 47999999999999997764 664 8999
Q ss_pred EEEeccCCCCCCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhh
Q 013006 284 VTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILET 363 (451)
Q Consensus 284 lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (451)
+|+.+|... ..+. .+... ....+......... +....... .....+.......+...
T Consensus 238 lVL~sP~l~--~~~~---~~~~~-------------~~~~l~~~~~p~~~----~~~~~~~~-~~~s~~~~~~~~~~~dp 294 (395)
T PLN02652 238 IVLTSPALR--VKPA---HPIVG-------------AVAPIFSLVAPRFQ----FKGANKRG-IPVSRDPAALLAKYSDP 294 (395)
T ss_pred EEEECcccc--cccc---hHHHH-------------HHHHHHHHhCCCCc----ccCccccc-CCcCCCHHHHHHHhcCC
Confidence 999987521 1000 00000 00000000000000 00000000 00000000000000000
Q ss_pred ccChhH--HHHHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCC--CcEEEeCCCCCCcc
Q 013006 364 TQHPAA--AASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPE--APYYEISPAGHCPH 439 (451)
Q Consensus 364 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~--~~~~~i~~~gH~~~ 439 (451)
...... ......... ........+.++++|+|+++|++|.++|++.++++.+.+++ .+++++++++|.++
T Consensus 295 ~~~~g~i~~~~~~~~~~------~~~~l~~~L~~I~vPvLIi~G~~D~vvp~~~a~~l~~~~~~~~k~l~~~~ga~H~l~ 368 (395)
T PLN02652 295 LVYTGPIRVRTGHEILR------ISSYLTRNFKSVTVPFMVLHGTADRVTDPLASQDLYNEAASRHKDIKLYDGFLHDLL 368 (395)
T ss_pred CcccCCchHHHHHHHHH------HHHHHHhhcccCCCCEEEEEeCCCCCCCHHHHHHHHHhcCCCCceEEEECCCeEEec
Confidence 000000 000000000 00123445678999999999999999999999999888654 78999999999987
Q ss_pred cc-ChHHHHhhh
Q 013006 440 DE-VPEVCSLCL 450 (451)
Q Consensus 440 ~e-~p~~v~~~I 450 (451)
.| +++++.+.|
T Consensus 369 ~e~~~e~v~~~I 380 (395)
T PLN02652 369 FEPEREEVGRDI 380 (395)
T ss_pred cCCCHHHHHHHH
Confidence 77 788888765
No 41
>PRK05855 short chain dehydrogenase; Validated
Probab=99.92 E-value=9.1e-24 Score=221.58 Aligned_cols=268 Identities=18% Similarity=0.159 Sum_probs=158.3
Q ss_pred ceeeecCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchh
Q 013006 137 CFWEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTE 216 (451)
Q Consensus 137 ~~~~~~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~ 216 (451)
.++...+|.+|+|..+|+. ++|+|||+||++++...|..+++.|+++|+|+++|+||||.|..+....
T Consensus 5 ~~~~~~~g~~l~~~~~g~~--~~~~ivllHG~~~~~~~w~~~~~~L~~~~~Vi~~D~~G~G~S~~~~~~~---------- 72 (582)
T PRK05855 5 RTVVSSDGVRLAVYEWGDP--DRPTVVLVHGYPDNHEVWDGVAPLLADRFRVVAYDVRGAGRSSAPKRTA---------- 72 (582)
T ss_pred EEEEeeCCEEEEEEEcCCC--CCCeEEEEcCCCchHHHHHHHHHHhhcceEEEEecCCCCCCCCCCCccc----------
Confidence 4455678999999999863 5789999999999999999999999889999999999999997543221
Q ss_pred hhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCC-EEEEEeCcchHHHHHHHHh--CCCccceEEEeccCCCC
Q 013006 217 EKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREP-VYVVGNSLGGFVAVYFAAC--NPHLVKGVTLLNATPFW 293 (451)
Q Consensus 217 ~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~-v~lvGhS~GG~val~~A~~--~P~~v~~lvl~~~~~~~ 293 (451)
.++++++++|+..++++++..+ ++|+||||||++++.++.+ .|+++..++.+++....
T Consensus 73 -------------------~~~~~~~a~dl~~~i~~l~~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~~~~~ 133 (582)
T PRK05855 73 -------------------AYTLARLADDFAAVIDAVSPDRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSGPSLD 133 (582)
T ss_pred -------------------ccCHHHHHHHHHHHHHHhCCCCcEEEEecChHHHHHHHHHhCccchhhhhhheeccCCchH
Confidence 2799999999999999998765 9999999999999988776 24455555554432100
Q ss_pred CCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHH----HhcCChHH-----HHHHHHHHhhcCCCC-hHHHHHHHHhh
Q 013006 294 GFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIW----QKISDPES-----IAEVLKQVYADHATN-VDTVFTRILET 363 (451)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~-----~~~~~~~~~~~~~~~-~~~~~~~~~~~ 363 (451)
. .......................+..... .....+.. ....+...+...... ..........
T Consensus 134 ----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 206 (582)
T PRK05855 134 ----H--VGFWLRSGLRRPTPRRLARALGQLLRSWYIYLFHLPVLPELLWRLGLGRAWPRLLRRVEGTPVDPIPTQTTL- 206 (582)
T ss_pred ----H--HHHHHhhcccccchhhhhHHHHHHhhhHHHHHHhCCCCcHHHhccchhhHHHHhhhhccCCCcchhhhhhhh-
Confidence 0 00000000000000000000000000000 00000000 000000000000000 0000000000
Q ss_pred ccChhHHHHHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccCh
Q 013006 364 TQHPAAAASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVP 443 (451)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p 443 (451)
.........+.... ........+..+++|+++|+|++|.++|+...+.+++.+++.++++++ +||++++|+|
T Consensus 207 ---~~~~~~~~~~~~~~----~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~-~gH~~~~e~p 278 (582)
T PRK05855 207 ---SDGAHGVKLYRANM----IRSLSRPRERYTDVPVQLIVPTGDPYVRPALYDDLSRWVPRLWRREIK-AGHWLPMSHP 278 (582)
T ss_pred ---ccccchHHHHHhhh----hhhhccCccCCccCceEEEEeCCCcccCHHHhccccccCCcceEEEcc-CCCcchhhCh
Confidence 00000000000000 000111124458999999999999999999999999989988888885 6999999999
Q ss_pred HHHHhhh
Q 013006 444 EVCSLCL 450 (451)
Q Consensus 444 ~~v~~~I 450 (451)
+++++.|
T Consensus 279 ~~~~~~i 285 (582)
T PRK05855 279 QVLAAAV 285 (582)
T ss_pred hHHHHHH
Confidence 9998776
No 42
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.91 E-value=4.6e-23 Score=196.01 Aligned_cols=255 Identities=19% Similarity=0.244 Sum_probs=163.3
Q ss_pred CCccceeeecCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhh-cCCceEEEEcCCCCCCCCC-CCCCCCCCC
Q 013006 133 PITSCFWEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDL-GKDYRAWAIDFLGQGMSLP-DEDPTPRSK 210 (451)
Q Consensus 133 ~~~~~~~~~~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L-~~~~~Vi~~D~rG~G~S~~-~~~~~~~~~ 210 (451)
.....++...||..++|..+-+.++...+||++||++.+...|..++..| .+||.|+++|+||||.|.+ ....
T Consensus 8 ~~~~~~~~~~d~~~~~~~~~~~~~~~~g~Vvl~HG~~Eh~~ry~~la~~l~~~G~~V~~~D~RGhG~S~r~~rg~----- 82 (298)
T COG2267 8 TRTEGYFTGADGTRLRYRTWAAPEPPKGVVVLVHGLGEHSGRYEELADDLAARGFDVYALDLRGHGRSPRGQRGH----- 82 (298)
T ss_pred ccccceeecCCCceEEEEeecCCCCCCcEEEEecCchHHHHHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCcCC-----
Confidence 34566777889999999999887555579999999999999999999999 5589999999999999974 1111
Q ss_pred CCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhC----CCCEEEEEeCcchHHHHHHHHhCCCccceEEE
Q 013006 211 EGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVI----REPVYVVGNSLGGFVAVYFAACNPHLVKGVTL 286 (451)
Q Consensus 211 ~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~----~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl 286 (451)
.-+++++.+|+..+++... ..+++++||||||.|++.++.+++.+|+++||
T Consensus 83 -------------------------~~~f~~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vL 137 (298)
T COG2267 83 -------------------------VDSFADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVL 137 (298)
T ss_pred -------------------------chhHHHHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEE
Confidence 1468999999999999885 37899999999999999999999999999999
Q ss_pred eccCCCCCCCCCCCCchHHhhhcC----CCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHh
Q 013006 287 LNATPFWGFSPNPIRSPKLARILP----WSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILE 362 (451)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (451)
.+|.-.... ............. +...+.... . . ................+.+..
T Consensus 138 ssP~~~l~~--~~~~~~~~~~~~~~~~~~~p~~~~~~-----------------~-~--~~~~~~~~~sr~~~~~~~~~~ 195 (298)
T COG2267 138 SSPALGLGG--AILRLILARLALKLLGRIRPKLPVDS-----------------N-L--LEGVLTDDLSRDPAEVAAYEA 195 (298)
T ss_pred ECccccCCh--hHHHHHHHHHhcccccccccccccCc-----------------c-c--ccCcCcchhhcCHHHHHHHhc
Confidence 998532110 0000000000000 000000000 0 0 000000000001111111111
Q ss_pred hcc--C-hhHHHHHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCC-hHHHHHHHHHC--CCCcEEEeCCCCC
Q 013006 363 TTQ--H-PAAAASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVK-PVWGLQVKRQV--PEAPYYEISPAGH 436 (451)
Q Consensus 363 ~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~-~~~~~~l~~~l--p~~~~~~i~~~gH 436 (451)
.-. . ......+...+.... .........+++|+|+++|++|.+++ .+...++.+.. +++++++++|+.|
T Consensus 196 dP~~~~~~~~~~w~~~~~~a~~-----~~~~~~~~~~~~PvLll~g~~D~vv~~~~~~~~~~~~~~~~~~~~~~~~g~~H 270 (298)
T COG2267 196 DPLIGVGGPVSRWVDLALLAGR-----VPALRDAPAIALPVLLLQGGDDRVVDNVEGLARFFERAGSPDKELKVIPGAYH 270 (298)
T ss_pred CCccccCCccHHHHHHHHHhhc-----ccchhccccccCCEEEEecCCCccccCcHHHHHHHHhcCCCCceEEecCCcch
Confidence 110 0 000111111111111 12233345689999999999999999 67777776655 5678999999999
Q ss_pred CccccChH
Q 013006 437 CPHDEVPE 444 (451)
Q Consensus 437 ~~~~e~p~ 444 (451)
.++.|.+.
T Consensus 271 e~~~E~~~ 278 (298)
T COG2267 271 ELLNEPDR 278 (298)
T ss_pred hhhcCcch
Confidence 99988654
No 43
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.90 E-value=9.9e-23 Score=188.17 Aligned_cols=247 Identities=17% Similarity=0.201 Sum_probs=161.7
Q ss_pred CCCcEEEecCCCCChhcHHHHHHhhcC--CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCcccccc
Q 013006 158 NSPPVLFLPGFGVGSFHYEKQLKDLGK--DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASEL 235 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~~~~~~~~L~~--~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~ 235 (451)
..|+++++||+.++...|..+...|++ +..|+++|.|.||.|.....
T Consensus 51 ~~Pp~i~lHGl~GS~~Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~~------------------------------- 99 (315)
T KOG2382|consen 51 RAPPAIILHGLLGSKENWRSVAKNLSRKLGRDVYAVDVRNHGSSPKITV------------------------------- 99 (315)
T ss_pred CCCceEEecccccCCCCHHHHHHHhcccccCceEEEecccCCCCccccc-------------------------------
Confidence 579999999999999999999999976 58999999999999965432
Q ss_pred ccCHHHHHHHHHHHHHHhC----CCCEEEEEeCcch-HHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCchHHhhhcC
Q 013006 236 AYSVDLWQDQVCYFIKEVI----REPVYVVGNSLGG-FVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILP 310 (451)
Q Consensus 236 ~~s~~~~a~dv~~ll~~l~----~~~v~lvGhS~GG-~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 310 (451)
++...+++|+..|++..+ ..+++++|||||| .+++..+...|+.+..+|+++.+|........ ....+-..+.
T Consensus 100 -h~~~~ma~dv~~Fi~~v~~~~~~~~~~l~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~~~~-e~~e~i~~m~ 177 (315)
T KOG2382|consen 100 -HNYEAMAEDVKLFIDGVGGSTRLDPVVLLGHSMGGVKVAMAETLKKPDLIERLIVEDISPGGVGRSYG-EYRELIKAMI 177 (315)
T ss_pred -cCHHHHHHHHHHHHHHcccccccCCceecccCcchHHHHHHHHHhcCcccceeEEEecCCccCCcccc-hHHHHHHHHH
Confidence 689999999999999985 5789999999999 88888889999999999999988741111111 1111111111
Q ss_pred CCCCC-CChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHH-HHHHHHHhcCCCCCchhH
Q 013006 311 WSGTF-PLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAA-ASFASIMFAPQGNLSFRE 388 (451)
Q Consensus 311 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 388 (451)
..... ..-.....+...+.. ...+..+.+++...+...... . .+.+..+.... ..+..+. ...+..
T Consensus 178 ~~d~~~~~~~~rke~~~~l~~-~~~d~~~~~fi~~nl~~~~~~--~----s~~w~~nl~~i~~~~~~~~-----~~s~~~ 245 (315)
T KOG2382|consen 178 QLDLSIGVSRGRKEALKSLIE-VGFDNLVRQFILTNLKKSPSD--G----SFLWRVNLDSIASLLDEYE-----ILSYWA 245 (315)
T ss_pred hccccccccccHHHHHHHHHH-HhcchHHHHHHHHhcCcCCCC--C----ceEEEeCHHHHHHHHHHHH-----hhcccc
Confidence 11000 000111111111111 122233334444333310000 0 00000111111 1111111 111122
Q ss_pred HhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 389 ALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 389 ~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
.++. .....|||++.|.++..++.+.-.++.+.+|++++++++++|||+|.|+|+++.+.|
T Consensus 246 ~l~~-~~~~~pvlfi~g~~S~fv~~~~~~~~~~~fp~~e~~~ld~aGHwVh~E~P~~~~~~i 306 (315)
T KOG2382|consen 246 DLED-GPYTGPVLFIKGLQSKFVPDEHYPRMEKIFPNVEVHELDEAGHWVHLEKPEEFIESI 306 (315)
T ss_pred cccc-cccccceeEEecCCCCCcChhHHHHHHHhccchheeecccCCceeecCCHHHHHHHH
Confidence 2222 456899999999999999999999999999999999999999999999999999876
No 44
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.90 E-value=1.1e-22 Score=184.61 Aligned_cols=257 Identities=19% Similarity=0.233 Sum_probs=166.1
Q ss_pred CCccceeeecCCeEEEEeecCCCC--CCCCcEEEecCCCCCh-hcHHHHHHhhc-CCceEEEEcCCCCCCCCCCCCCCCC
Q 013006 133 PITSCFWEWKPKFNVHYEKAGCEN--VNSPPVLFLPGFGVGS-FHYEKQLKDLG-KDYRAWAIDFLGQGMSLPDEDPTPR 208 (451)
Q Consensus 133 ~~~~~~~~~~~g~~l~y~~~g~~~--~~~p~VlllHG~~~~~-~~~~~~~~~L~-~~~~Vi~~D~rG~G~S~~~~~~~~~ 208 (451)
..+..+++..+|.++++..|-|.+ +.+-.|+++||++... ..|..++..|+ .||.|+++|++|||.|+.....
T Consensus 26 ~~~~~~~~n~rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl~~y--- 102 (313)
T KOG1455|consen 26 TYSESFFTNPRGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRYQSTAKRLAKSGFAVYAIDYEGHGRSDGLHAY--- 102 (313)
T ss_pred ceeeeeEEcCCCCEeEEEecccCCCCCCceEEEEEcCCcccchhhHHHHHHHHHhCCCeEEEeeccCCCcCCCCccc---
Confidence 456788888999999999998754 3345799999998875 77888888885 4899999999999999854332
Q ss_pred CCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhC------CCCEEEEEeCcchHHHHHHHHhCCCccc
Q 013006 209 SKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVI------REPVYVVGNSLGGFVAVYFAACNPHLVK 282 (451)
Q Consensus 209 ~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~------~~~v~lvGhS~GG~val~~A~~~P~~v~ 282 (451)
.-+++..++|+..+.+... ..+..|+||||||+|++.++.++|+..+
T Consensus 103 ---------------------------i~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~ 155 (313)
T KOG1455|consen 103 ---------------------------VPSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWD 155 (313)
T ss_pred ---------------------------CCcHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccc
Confidence 2588999999998888642 3579999999999999999999999999
Q ss_pred eEEEeccCCCCC--CCCCCCCchHHhh---hcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHH
Q 013006 283 GVTLLNATPFWG--FSPNPIRSPKLAR---ILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVF 357 (451)
Q Consensus 283 ~lvl~~~~~~~~--~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (451)
++|+++|..... ..|++.....+.. +.+.....+....... ...++... .....+...
T Consensus 156 G~ilvaPmc~i~~~~kp~p~v~~~l~~l~~liP~wk~vp~~d~~~~-------~~kdp~~r-----~~~~~npl~----- 218 (313)
T KOG1455|consen 156 GAILVAPMCKISEDTKPHPPVISILTLLSKLIPTWKIVPTKDIIDV-------AFKDPEKR-----KILRSDPLC----- 218 (313)
T ss_pred cceeeecccccCCccCCCcHHHHHHHHHHHhCCceeecCCcccccc-------ccCCHHHH-----HHhhcCCce-----
Confidence 999999865311 1111111111111 1100000000000000 00001000 000000000
Q ss_pred HHHHhhccChhHHHHHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCC--CCcEEEeCCCC
Q 013006 358 TRILETTQHPAAAASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVP--EAPYYEISPAG 435 (451)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp--~~~~~~i~~~g 435 (451)
....+.. .....++. ...+...++.++++|.+++||+.|.++.+..++.+.+..+ +.++.++||.-
T Consensus 219 -----y~g~pRl-~T~~ElLr------~~~~le~~l~~vtvPflilHG~dD~VTDp~~Sk~Lye~A~S~DKTlKlYpGm~ 286 (313)
T KOG1455|consen 219 -----YTGKPRL-KTAYELLR------VTADLEKNLNEVTVPFLILHGTDDKVTDPKVSKELYEKASSSDKTLKLYPGMW 286 (313)
T ss_pred -----ecCCccH-HHHHHHHH------HHHHHHHhcccccccEEEEecCCCcccCcHHHHHHHHhccCCCCceeccccHH
Confidence 0000000 01111110 1135566778999999999999999999999999999875 47899999999
Q ss_pred CCccccChHHHHh
Q 013006 436 HCPHDEVPEVCSL 448 (451)
Q Consensus 436 H~~~~e~p~~v~~ 448 (451)
|.++.-.|++..+
T Consensus 287 H~Ll~gE~~en~e 299 (313)
T KOG1455|consen 287 HSLLSGEPDENVE 299 (313)
T ss_pred HHhhcCCCchhHH
Confidence 9999744444433
No 45
>PLN02511 hydrolase
Probab=99.90 E-value=6.2e-23 Score=203.34 Aligned_cols=251 Identities=15% Similarity=0.116 Sum_probs=144.3
Q ss_pred cceeeecCCeEEEEeecC----CCCCCCCcEEEecCCCCChhc-H-HHHHHh-hcCCceEEEEcCCCCCCCCCCCCCCCC
Q 013006 136 SCFWEWKPKFNVHYEKAG----CENVNSPPVLFLPGFGVGSFH-Y-EKQLKD-LGKDYRAWAIDFLGQGMSLPDEDPTPR 208 (451)
Q Consensus 136 ~~~~~~~~g~~l~y~~~g----~~~~~~p~VlllHG~~~~~~~-~-~~~~~~-L~~~~~Vi~~D~rG~G~S~~~~~~~~~ 208 (451)
...+...||..+.+.... ..+.++|+|||+||+++++.. | ..++.. +.++|+|+++|+||||.|......
T Consensus 73 re~l~~~DG~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~~~--- 149 (388)
T PLN02511 73 RECLRTPDGGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVTTPQ--- 149 (388)
T ss_pred EEEEECCCCCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCCCcC---
Confidence 345666788777763321 112356899999999776543 5 445554 467899999999999999643211
Q ss_pred CCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCC----CCEEEEEeCcchHHHHHHHHhCCCc--cc
Q 013006 209 SKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIR----EPVYVVGNSLGGFVAVYFAACNPHL--VK 282 (451)
Q Consensus 209 ~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~----~~v~lvGhS~GG~val~~A~~~P~~--v~ 282 (451)
+....+++|+.++++++.. .+++++||||||.+++.++.++|++ |.
T Consensus 150 ----------------------------~~~~~~~~Dl~~~i~~l~~~~~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~ 201 (388)
T PLN02511 150 ----------------------------FYSASFTGDLRQVVDHVAGRYPSANLYAAGWSLGANILVNYLGEEGENCPLS 201 (388)
T ss_pred ----------------------------EEcCCchHHHHHHHHHHHHHCCCCCEEEEEechhHHHHHHHHHhcCCCCCce
Confidence 1223556677777777654 6899999999999999999999987 88
Q ss_pred eEEEeccCCCCCCCCCCCCchHHhhhcCCCCCCCChHHH-HHHHHHHHHhcCChHHHHHHHHHHhhcCC--CChHHHHHH
Q 013006 283 GVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASV-RKLIEFIWQKISDPESIAEVLKQVYADHA--TNVDTVFTR 359 (451)
Q Consensus 283 ~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 359 (451)
++++++++.. . ......+... ..... ..+...+.. ........+.... ..... .
T Consensus 202 ~~v~is~p~~--l------~~~~~~~~~~-----~~~~y~~~~~~~l~~-------~~~~~~~~~~~~~~~~~~~~-~-- 258 (388)
T PLN02511 202 GAVSLCNPFD--L------VIADEDFHKG-----FNNVYDKALAKALRK-------IFAKHALLFEGLGGEYNIPL-V-- 258 (388)
T ss_pred EEEEECCCcC--H------HHHHHHHhcc-----HHHHHHHHHHHHHHH-------HHHHHHHHHhhCCCccCHHH-H--
Confidence 8888875321 0 0000000000 00000 000000000 0000000000000 00000 0
Q ss_pred HHhhccChhHHHHHHHHHhcCCCCC-c------hhHHhhhccCCCCCEEEEeeCCCCCCChHHH-HHHHHHCCCCcEEEe
Q 013006 360 ILETTQHPAAAASFASIMFAPQGNL-S------FREALSRCQMNGVPICLIYGKEDPWVKPVWG-LQVKRQVPEAPYYEI 431 (451)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~-~------~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~-~~l~~~lp~~~~~~i 431 (451)
... .....+...+......+ . ..+....+.+|++|+|+|+|++|+++|++.. ..+.+..|++++.++
T Consensus 259 -~~~----~~~~~fd~~~t~~~~gf~~~~~yy~~~s~~~~L~~I~vPtLiI~g~dDpi~p~~~~~~~~~~~~p~~~l~~~ 333 (388)
T PLN02511 259 -ANA----KTVRDFDDGLTRVSFGFKSVDAYYSNSSSSDSIKHVRVPLLCIQAANDPIAPARGIPREDIKANPNCLLIVT 333 (388)
T ss_pred -HhC----CCHHHHHHhhhhhcCCCCCHHHHHHHcCchhhhccCCCCeEEEEcCCCCcCCcccCcHhHHhcCCCEEEEEC
Confidence 000 00000111010000000 0 0123446788999999999999999998765 456777899999999
Q ss_pred CCCCCCccccChHH
Q 013006 432 SPAGHCPHDEVPEV 445 (451)
Q Consensus 432 ~~~gH~~~~e~p~~ 445 (451)
+++||+.++|+|+.
T Consensus 334 ~~gGH~~~~E~p~~ 347 (388)
T PLN02511 334 PSGGHLGWVAGPEA 347 (388)
T ss_pred CCcceeccccCCCC
Confidence 99999999999875
No 46
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.90 E-value=1.2e-23 Score=178.21 Aligned_cols=239 Identities=18% Similarity=0.115 Sum_probs=161.3
Q ss_pred cCCeEEEEeecCCCCCCCCcEEEecCCC-CChhcHHHHHHhhcC--CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhh
Q 013006 142 KPKFNVHYEKAGCENVNSPPVLFLPGFG-VGSFHYEKQLKDLGK--DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEK 218 (451)
Q Consensus 142 ~~g~~l~y~~~g~~~~~~p~VlllHG~~-~~~~~~~~~~~~L~~--~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~ 218 (451)
-+|.+|+|...|.+ ...||+++|.. .....|.+++..|.+ .+.|+++|.||+|.|.++....+.
T Consensus 28 vng~ql~y~~~G~G---~~~iLlipGalGs~~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP~Rkf~~---------- 94 (277)
T KOG2984|consen 28 VNGTQLGYCKYGHG---PNYILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPERKFEV---------- 94 (277)
T ss_pred ecCceeeeeecCCC---CceeEecccccccccccCCHHHHhcCCCCceEEEEECCCCCCCCCCCcccchH----------
Confidence 46999999999953 34799999975 446779999988844 499999999999999887664321
Q ss_pred hccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCC
Q 013006 219 NFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPN 298 (451)
Q Consensus 219 ~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~ 298 (451)
.-+..-+++...+++.|..+++.++|+|-||.+|+..|+++++.|.++|++++.++..-...
T Consensus 95 ------------------~ff~~Da~~avdLM~aLk~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~~~ 156 (277)
T KOG2984|consen 95 ------------------QFFMKDAEYAVDLMEALKLEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHLGA 156 (277)
T ss_pred ------------------HHHHHhHHHHHHHHHHhCCCCeeEeeecCCCeEEEEeeccChhhhhhheeecccceecchhH
Confidence 12233455666788999999999999999999999999999999999999998754211000
Q ss_pred CCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHh
Q 013006 299 PIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMF 378 (451)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (451)
......+....|..+ .++-+...|.. +.+.+... .+......+..
T Consensus 157 -ma~kgiRdv~kWs~r-----------------------~R~P~e~~Yg~------e~f~~~wa-----~wvD~v~qf~~ 201 (277)
T KOG2984|consen 157 -MAFKGIRDVNKWSAR-----------------------GRQPYEDHYGP------ETFRTQWA-----AWVDVVDQFHS 201 (277)
T ss_pred -HHHhchHHHhhhhhh-----------------------hcchHHHhcCH------HHHHHHHH-----HHHHHHHHHhh
Confidence 000000000001000 00000111110 11111000 01111122222
Q ss_pred cCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 379 APQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 379 ~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
...+.+ -...+.+++||+||++|+.|++++..+...+..+.+.++++++|.++|.+|+..+++|+..+
T Consensus 202 ~~dG~f----Cr~~lp~vkcPtli~hG~kDp~~~~~hv~fi~~~~~~a~~~~~peGkHn~hLrya~eFnklv 269 (277)
T KOG2984|consen 202 FCDGRF----CRLVLPQVKCPTLIMHGGKDPFCGDPHVCFIPVLKSLAKVEIHPEGKHNFHLRYAKEFNKLV 269 (277)
T ss_pred cCCCch----HhhhcccccCCeeEeeCCcCCCCCCCCccchhhhcccceEEEccCCCcceeeechHHHHHHH
Confidence 222222 12236789999999999999999999999999999999999999999999999999999875
No 47
>PLN02872 triacylglycerol lipase
Probab=99.89 E-value=6.1e-22 Score=194.80 Aligned_cols=295 Identities=14% Similarity=0.209 Sum_probs=177.1
Q ss_pred CCCCccceeeecCCeEEEEeecCCC-----CCCCCcEEEecCCCCChhcHH------HHHHhhcC-CceEEEEcCCCCCC
Q 013006 131 GAPITSCFWEWKPKFNVHYEKAGCE-----NVNSPPVLFLPGFGVGSFHYE------KQLKDLGK-DYRAWAIDFLGQGM 198 (451)
Q Consensus 131 ~~~~~~~~~~~~~g~~l~y~~~g~~-----~~~~p~VlllHG~~~~~~~~~------~~~~~L~~-~~~Vi~~D~rG~G~ 198 (451)
|.+.+...+++.||..|......+. ...+|+|||+||++.++..|. .+...|++ ||+||++|+||++.
T Consensus 41 gy~~e~h~v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG~~~ 120 (395)
T PLN02872 41 GYSCTEHTIQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVRGTRW 120 (395)
T ss_pred CCCceEEEEECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccceeecCcccchHHHHHhCCCCccccccccccc
Confidence 7778888899999999888775321 123689999999999998884 34445654 89999999999988
Q ss_pred CCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccccCHHHHH-HHHHHHHHHh---CCCCEEEEEeCcchHHHHHHH
Q 013006 199 SLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQ-DQVCYFIKEV---IREPVYVVGNSLGGFVAVYFA 274 (451)
Q Consensus 199 S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a-~dv~~ll~~l---~~~~v~lvGhS~GG~val~~A 274 (451)
|.......+ .+..+|.| ++++++ .|+.++++.+ ..+++++|||||||.+++.++
T Consensus 121 s~gh~~~~~---------~~~~fw~~-------------s~~e~a~~Dl~a~id~i~~~~~~~v~~VGhS~Gg~~~~~~~ 178 (395)
T PLN02872 121 SYGHVTLSE---------KDKEFWDW-------------SWQELALYDLAEMIHYVYSITNSKIFIVGHSQGTIMSLAAL 178 (395)
T ss_pred ccCCCCCCc---------cchhccCC-------------cHHHHHHHHHHHHHHHHHhccCCceEEEEECHHHHHHHHHh
Confidence 754322111 23345543 788888 7888888876 347999999999999998544
Q ss_pred HhCCC---ccceEEEeccCCCCCCCCCCCCch----HHhhh---cCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHH
Q 013006 275 ACNPH---LVKGVTLLNATPFWGFSPNPIRSP----KLARI---LPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQ 344 (451)
Q Consensus 275 ~~~P~---~v~~lvl~~~~~~~~~~~~~~~~~----~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (451)
.+|+ +|+++++++|.++..-...+.... ....+ +......+....+..+...++.. ...+...+..
T Consensus 179 -~~p~~~~~v~~~~~l~P~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~C~~---~~~c~~~~~~ 254 (395)
T PLN02872 179 -TQPNVVEMVEAAALLCPISYLDHVTAPLVLRMVFMHLDQMVVAMGIHQLNFRSDVLVKLLDSICEG---HMDCNDLLTS 254 (395)
T ss_pred -hChHHHHHHHHHHHhcchhhhccCCCHHHHHHHHHhHHHHHHHhcCceecCCcHHHHHHHHHHccC---chhHHHHHHH
Confidence 6786 689999999987654333322110 00011 11111112222333333333321 1113333333
Q ss_pred HhhcCCCChHHHHHHHHhhccChhHHHHHHHHHh----cCCCCCchh--HH----------hhhccCC--CCCEEEEeeC
Q 013006 345 VYADHATNVDTVFTRILETTQHPAAAASFASIMF----APQGNLSFR--EA----------LSRCQMN--GVPICLIYGK 406 (451)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~--~~----------~~~l~~i--~~PvLii~G~ 406 (451)
+...+.......+..++...........+..+.. .....+++. .. .-.+.++ ++|+++++|+
T Consensus 255 ~~g~~~~~n~~~~~~~~~~~pagtS~k~~~H~~Q~~~s~~f~~yDyg~~~n~~~Yg~~~pP~Y~l~~i~~~~Pv~i~~G~ 334 (395)
T PLN02872 255 ITGTNCCFNASRIDYYLEYEPHPSSVKNLRHLFQMIRKGTFAHYDYGIFKNLKLYGQVNPPAFDLSLIPKSLPLWMGYGG 334 (395)
T ss_pred HhCCCcccchhhhhHHHhcCCCcchHHHHHHHHHHHhcCCcccCCCCchhhHHHhCCCCCCCcCcccCCCCccEEEEEcC
Confidence 3332211111112222221111111111111111 111112211 11 1145667 5899999999
Q ss_pred CCCCCChHHHHHHHHHCCC-CcEEEeCCCCCC---ccccChHHHHhhhC
Q 013006 407 EDPWVKPVWGLQVKRQVPE-APYYEISPAGHC---PHDEVPEVCSLCLL 451 (451)
Q Consensus 407 ~D~~v~~~~~~~l~~~lp~-~~~~~i~~~gH~---~~~e~p~~v~~~Il 451 (451)
+|.+++++..+++.+.+++ .+++.++++||. ...+.|+++.+.|+
T Consensus 335 ~D~lv~~~dv~~l~~~Lp~~~~l~~l~~~gH~dfi~~~eape~V~~~Il 383 (395)
T PLN02872 335 TDGLADVTDVEHTLAELPSKPELLYLENYGHIDFLLSTSAKEDVYNHMI 383 (395)
T ss_pred CCCCCCHHHHHHHHHHCCCccEEEEcCCCCCHHHHhCcchHHHHHHHHH
Confidence 9999999999999999988 678889999995 45589999887763
No 48
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.88 E-value=1.1e-22 Score=186.94 Aligned_cols=218 Identities=22% Similarity=0.294 Sum_probs=133.9
Q ss_pred ceEEEEcCCCCCCCCC---CCCCCCCCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEE
Q 013006 186 YRAWAIDFLGQGMSLP---DEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVG 262 (451)
Q Consensus 186 ~~Vi~~D~rG~G~S~~---~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvG 262 (451)
|+|+++|+||+|.|++ .... .++.+++++++..++++++.++++++|
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~------------------------------~~~~~~~~~~~~~~~~~l~~~~~~~vG 50 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFP------------------------------DYTTDDLAADLEALREALGIKKINLVG 50 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSC------------------------------THCHHHHHHHHHHHHHHHTTSSEEEEE
T ss_pred CEEEEEeCCCCCCCCCCccCCcc------------------------------cccHHHHHHHHHHHHHHhCCCCeEEEE
Confidence 7899999999999984 2111 289999999999999999999999999
Q ss_pred eCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCC--hHHHHH
Q 013006 263 NSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISD--PESIAE 340 (451)
Q Consensus 263 hS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 340 (451)
|||||++++.+|+++|++|+++|++++.+. .........+.. ................. ......
T Consensus 51 ~S~Gg~~~~~~a~~~p~~v~~lvl~~~~~~---------~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (230)
T PF00561_consen 51 HSMGGMLALEYAAQYPERVKKLVLISPPPD---------LPDGLWNRIWPR----GNLQGQLLDNFFNFLSDPIKPLLGR 117 (230)
T ss_dssp ETHHHHHHHHHHHHSGGGEEEEEEESESSH---------HHHHHHHHCHHH----HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ECCChHHHHHHHHHCchhhcCcEEEeeecc---------chhhhhHHHHhh----hhhhhhHHHhhhccccccchhhhhh
Confidence 999999999999999999999999998520 000000000000 00000000000000000 000000
Q ss_pred HHHHHhhcCC---CChHHH--HHHHHhhccChhHHHHHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHH
Q 013006 341 VLKQVYADHA---TNVDTV--FTRILETTQHPAAAASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVW 415 (451)
Q Consensus 341 ~~~~~~~~~~---~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~ 415 (451)
.......... ...... ...+... ........... .........+....+..+++|+++++|++|+++|++.
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~ 193 (230)
T PF00561_consen 118 WPKQFFAYDREFVEDFLKQFQSQQYARF-AETDAFDNMFW---NALGYFSVWDPSPALSNIKVPTLIIWGEDDPLVPPES 193 (230)
T ss_dssp HHHHHHHHHHHHHHTHHHHHHHHHHHHT-CHHHHHHHHHH---HHHHHHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHH
T ss_pred hhhheeeccCccccchhhccchhhhhHH-HHHHHHhhhcc---ccccccccccccccccccCCCeEEEEeCCCCCCCHHH
Confidence 0000000000 000000 0011110 00000000000 0000112234455677899999999999999999999
Q ss_pred HHHHHHHCCCCcEEEeCCCCCCccccChHHHHhhh
Q 013006 416 GLQVKRQVPEAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 416 ~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
...+.+.+|+.++++++++||+.+++.|+++++.|
T Consensus 194 ~~~~~~~~~~~~~~~~~~~GH~~~~~~~~~~~~~i 228 (230)
T PF00561_consen 194 SEQLAKLIPNSQLVLIEGSGHFAFLEGPDEFNEII 228 (230)
T ss_dssp HHHHHHHSTTEEEEEETTCCSTHHHHSHHHHHHHH
T ss_pred HHHHHHhcCCCEEEECCCCChHHHhcCHHhhhhhh
Confidence 99999999999999999999999999999999887
No 49
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.88 E-value=1.5e-21 Score=189.54 Aligned_cols=257 Identities=14% Similarity=0.115 Sum_probs=149.3
Q ss_pred eecCCeEEEEeecCCCCCCCCcEEEecCCCCChh-cH-------------------------HHHHHhh-cCCceEEEEc
Q 013006 140 EWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSF-HY-------------------------EKQLKDL-GKDYRAWAID 192 (451)
Q Consensus 140 ~~~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~-~~-------------------------~~~~~~L-~~~~~Vi~~D 192 (451)
+..||.+|++..+.+.++ +.+|+++||++.+.. .| ..+++.| .+||+|+++|
T Consensus 3 ~~~~g~~l~~~~~~~~~~-kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~~~D 81 (332)
T TIGR01607 3 RNKDGLLLKTYSWIVKNA-IGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVYGLD 81 (332)
T ss_pred cCCCCCeEEEeeeeccCC-eEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEEEec
Confidence 456899999999876543 459999999998885 11 4678888 4589999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhC------------------
Q 013006 193 FLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVI------------------ 254 (451)
Q Consensus 193 ~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~------------------ 254 (451)
+||||.|........ ...+++++++|+..+++.+.
T Consensus 82 ~rGHG~S~~~~~~~g---------------------------~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~ 134 (332)
T TIGR01607 82 LQGHGESDGLQNLRG---------------------------HINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDI 134 (332)
T ss_pred ccccCCCcccccccc---------------------------chhhHHHHHHHHHHHHHHhhhhhccccccccccccccc
Confidence 999999974322110 01378999999999998642
Q ss_pred ------CCCEEEEEeCcchHHHHHHHHhCCC--------ccceEEEeccCCCCCCCCCCCCchHHhhhcCCCCCCCChHH
Q 013006 255 ------REPVYVVGNSLGGFVAVYFAACNPH--------LVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPAS 320 (451)
Q Consensus 255 ------~~~v~lvGhS~GG~val~~A~~~P~--------~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (451)
..|++|+||||||.+++.++.++++ .++++|++++.-.......+. ....+..
T Consensus 135 ~~~~~~~~p~~l~GhSmGg~i~~~~~~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~-------------~~~~~~~ 201 (332)
T TIGR01607 135 VNTKENRLPMYIIGLSMGGNIALRLLELLGKSNENNDKLNIKGCISLSGMISIKSVGSDD-------------SFKFKYF 201 (332)
T ss_pred cccccCCCceeEeeccCccHHHHHHHHHhccccccccccccceEEEeccceEEecccCCC-------------cchhhhh
Confidence 3479999999999999999877643 589999888752100000000 0000000
Q ss_pred HHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhh-c-cChh-HHHHHHHHHhcCCCCCchhHHhhhccCC-
Q 013006 321 VRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILET-T-QHPA-AAASFASIMFAPQGNLSFREALSRCQMN- 396 (451)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~i- 396 (451)
...+...+.. +........ ...+... +...+.+... . .... ....+..++... ......+..+
T Consensus 202 ~~~l~~~~~~-~~p~~~~~~--~~~~~~~----~~~~~~~~~Dp~~~~~~~s~~~~~~l~~~~------~~~~~~~~~i~ 268 (332)
T TIGR01607 202 YLPVMNFMSR-VFPTFRISK--KIRYEKS----PYVNDIIKFDKFRYDGGITFNLASELIKAT------DTLDCDIDYIP 268 (332)
T ss_pred HHHHHHHHHH-HCCcccccC--ccccccC----hhhhhHHhcCccccCCcccHHHHHHHHHHH------HHHHhhHhhCC
Confidence 0111110000 000000000 0000000 0000000000 0 0000 011111111000 0111123334
Q ss_pred -CCCEEEEeeCCCCCCChHHHHHHHHHC--CCCcEEEeCCCCCCccccC-hHHHHhhh
Q 013006 397 -GVPICLIYGKEDPWVKPVWGLQVKRQV--PEAPYYEISPAGHCPHDEV-PEVCSLCL 450 (451)
Q Consensus 397 -~~PvLii~G~~D~~v~~~~~~~l~~~l--p~~~~~~i~~~gH~~~~e~-p~~v~~~I 450 (451)
++|+|+|+|++|.+++++.++.+.+.. ++.++.++++++|.++.|. ++++.+.|
T Consensus 269 ~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~~~~~l~~~~g~~H~i~~E~~~~~v~~~i 326 (332)
T TIGR01607 269 KDIPILFIHSKGDCVCSYEGTVSFYNKLSISNKELHTLEDMDHVITIEPGNEEVLKKI 326 (332)
T ss_pred CCCCEEEEEeCCCCccCHHHHHHHHHhccCCCcEEEEECCCCCCCccCCCHHHHHHHH
Confidence 799999999999999999999887765 5688999999999999985 57776654
No 50
>PRK10985 putative hydrolase; Provisional
Probab=99.86 E-value=2e-20 Score=181.60 Aligned_cols=253 Identities=13% Similarity=0.080 Sum_probs=139.7
Q ss_pred ceeeecCCeEEEEeec--CCCCCCCCcEEEecCCCCChhc--HHHHHHhhc-CCceEEEEcCCCCCCCCCCCCCCCCCCC
Q 013006 137 CFWEWKPKFNVHYEKA--GCENVNSPPVLFLPGFGVGSFH--YEKQLKDLG-KDYRAWAIDFLGQGMSLPDEDPTPRSKE 211 (451)
Q Consensus 137 ~~~~~~~g~~l~y~~~--g~~~~~~p~VlllHG~~~~~~~--~~~~~~~L~-~~~~Vi~~D~rG~G~S~~~~~~~~~~~~ 211 (451)
..++..||..+.+... ....+++|+||++||++++... +..++..|. +||+|+++|+||||.+.... +....
T Consensus 34 ~~~~~~dg~~~~l~w~~~~~~~~~~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~-~~~~~-- 110 (324)
T PRK10985 34 QRLELPDGDFVDLAWSEDPAQARHKPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRL-HRIYH-- 110 (324)
T ss_pred eEEECCCCCEEEEecCCCCccCCCCCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCC-cceEC--
Confidence 3456677766544322 2222346899999999877443 456777774 58999999999999774211 10000
Q ss_pred CCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCc--cceEEEecc
Q 013006 212 GDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHL--VKGVTLLNA 289 (451)
Q Consensus 212 ~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~--v~~lvl~~~ 289 (451)
....+|+.+.+..+.++++..+++++||||||.+++.+++++++. +.++|++++
T Consensus 111 ------------------------~~~~~D~~~~i~~l~~~~~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~ 166 (324)
T PRK10985 111 ------------------------SGETEDARFFLRWLQREFGHVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSA 166 (324)
T ss_pred ------------------------CCchHHHHHHHHHHHHhCCCCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcC
Confidence 013455555555555566778999999999999998888887654 899999987
Q ss_pred CCCCCCCCCCCCchHHhhhcCCCCCCCChHHHHHHH-HHHHHhcCChHHHHHHHHHHhhcCCCChHHH-----HHHHHhh
Q 013006 290 TPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLI-EFIWQKISDPESIAEVLKQVYADHATNVDTV-----FTRILET 363 (451)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 363 (451)
.... ......+.. ....+. ..+...+. .........+......+.+.. ...+-+.
T Consensus 167 p~~~--------~~~~~~~~~---------~~~~~~~~~l~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~ 227 (324)
T PRK10985 167 PLML--------EACSYRMEQ---------GFSRVYQRYLLNLLK--ANAARKLAAYPGTLPINLAQLKSVRRLREFDDL 227 (324)
T ss_pred CCCH--------HHHHHHHhh---------hHHHHHHHHHHHHHH--HHHHHHHHhccccccCCHHHHhcCCcHHHHhhh
Confidence 4210 000000000 000000 00000000 000111111100000000000 0000000
Q ss_pred ccCh-hHHHHHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccC
Q 013006 364 TQHP-AAAASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEV 442 (451)
Q Consensus 364 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~ 442 (451)
...+ ........++. ..+....++++++|+++|+|++|++++++....+.+..+++++.+++++||+.++|-
T Consensus 228 ~~~~~~g~~~~~~~y~-------~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~GH~~~~~g 300 (324)
T PRK10985 228 ITARIHGFADAIDYYR-------QCSALPLLNQIRKPTLIIHAKDDPFMTHEVIPKPESLPPNVEYQLTEHGGHVGFVGG 300 (324)
T ss_pred heeccCCCCCHHHHHH-------HCChHHHHhCCCCCEEEEecCCCCCCChhhChHHHHhCCCeEEEECCCCCceeeCCC
Confidence 0000 00001111111 012335567899999999999999999988888888888999999999999999874
No 51
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.86 E-value=8.5e-20 Score=181.79 Aligned_cols=232 Identities=18% Similarity=0.115 Sum_probs=144.5
Q ss_pred CccceeeecCCeEEEEeecCCC-CCCCCcEEEecCCCCCh-hcHHHHHHhhc-CCceEEEEcCCCCCCCCCCCCCCCCCC
Q 013006 134 ITSCFWEWKPKFNVHYEKAGCE-NVNSPPVLFLPGFGVGS-FHYEKQLKDLG-KDYRAWAIDFLGQGMSLPDEDPTPRSK 210 (451)
Q Consensus 134 ~~~~~~~~~~g~~l~y~~~g~~-~~~~p~VlllHG~~~~~-~~~~~~~~~L~-~~~~Vi~~D~rG~G~S~~~~~~~~~~~ 210 (451)
+....+...+|.+|......|. +.+.|+||+.||+.+.. ..|..++..|+ +||.|+++|+||+|.|......
T Consensus 168 ~e~v~i~~~~g~~l~g~l~~P~~~~~~P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~~~----- 242 (414)
T PRK05077 168 LKELEFPIPGGGPITGFLHLPKGDGPFPTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSSKWKLT----- 242 (414)
T ss_pred eEEEEEEcCCCcEEEEEEEECCCCCCccEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCcc-----
Confidence 4444555667767776655442 23456676666766553 57888888885 4799999999999999642110
Q ss_pred CCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHh---CCCCEEEEEeCcchHHHHHHHHhCCCccceEEEe
Q 013006 211 EGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEV---IREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLL 287 (451)
Q Consensus 211 ~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l---~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~ 287 (451)
.+...+..++.+++... +.+++.++||||||.+++.+|..+|++|+++|++
T Consensus 243 --------------------------~d~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~ 296 (414)
T PRK05077 243 --------------------------QDSSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACL 296 (414)
T ss_pred --------------------------ccHHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEE
Confidence 23444445666666554 4578999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccCh
Q 013006 288 NATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHP 367 (451)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (451)
++.... .... ......+ +......+...+.......+. +...+..+
T Consensus 297 ~~~~~~-~~~~-------------------~~~~~~~----------p~~~~~~la~~lg~~~~~~~~-l~~~l~~~--- 342 (414)
T PRK05077 297 GPVVHT-LLTD-------------------PKRQQQV----------PEMYLDVLASRLGMHDASDEA-LRVELNRY--- 342 (414)
T ss_pred CCccch-hhcc-------------------hhhhhhc----------hHHHHHHHHHHhCCCCCChHH-HHHHhhhc---
Confidence 875310 0000 0000000 000011111111111111111 11000000
Q ss_pred hHHHHHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChHHHH
Q 013006 368 AAAASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPEVCS 447 (451)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~~v~ 447 (451)
.......+ .+++++|+|+|+|++|+++|++.++.+.+..|+.+++++|++ ++.+.+++++
T Consensus 343 ---------------sl~~~~~l--~~~i~~PvLiI~G~~D~ivP~~~a~~l~~~~~~~~l~~i~~~---~~~e~~~~~~ 402 (414)
T PRK05077 343 ---------------SLKVQGLL--GRRCPTPMLSGYWKNDPFSPEEDSRLIASSSADGKLLEIPFK---PVYRNFDKAL 402 (414)
T ss_pred ---------------cchhhhhh--ccCCCCcEEEEecCCCCCCCHHHHHHHHHhCCCCeEEEccCC---CccCCHHHHH
Confidence 00000111 146899999999999999999999999999999999999985 5668899888
Q ss_pred hhh
Q 013006 448 LCL 450 (451)
Q Consensus 448 ~~I 450 (451)
..|
T Consensus 403 ~~i 405 (414)
T PRK05077 403 QEI 405 (414)
T ss_pred HHH
Confidence 765
No 52
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.86 E-value=4.5e-20 Score=159.76 Aligned_cols=213 Identities=17% Similarity=0.214 Sum_probs=145.7
Q ss_pred CcEEEecCCCCChhcHHHHHHhhcC-CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccccC
Q 013006 160 PPVLFLPGFGVGSFHYEKQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYS 238 (451)
Q Consensus 160 p~VlllHG~~~~~~~~~~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s 238 (451)
..|||+|||.++....+.+.+.|.+ ||.|.+|.+||||-.... .+..+
T Consensus 16 ~AVLllHGFTGt~~Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~e~-------------------------------fl~t~ 64 (243)
T COG1647 16 RAVLLLHGFTGTPRDVRMLGRYLNENGYTVYAPRYPGHGTLPED-------------------------------FLKTT 64 (243)
T ss_pred EEEEEEeccCCCcHHHHHHHHHHHHCCceEecCCCCCCCCCHHH-------------------------------HhcCC
Confidence 6899999999999999999999965 799999999999987411 12368
Q ss_pred HHHHHHHHHHHHHHh---CCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCchHHhhhcCCCCCC
Q 013006 239 VDLWQDQVCYFIKEV---IREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTF 315 (451)
Q Consensus 239 ~~~~a~dv~~ll~~l---~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (451)
.++|.+++.+-.++| +.+.|.++|.||||.+++.+|..+| ++++|.++++... ..|
T Consensus 65 ~~DW~~~v~d~Y~~L~~~gy~eI~v~GlSmGGv~alkla~~~p--~K~iv~m~a~~~~---------------k~~---- 123 (243)
T COG1647 65 PRDWWEDVEDGYRDLKEAGYDEIAVVGLSMGGVFALKLAYHYP--PKKIVPMCAPVNV---------------KSW---- 123 (243)
T ss_pred HHHHHHHHHHHHHHHHHcCCCeEEEEeecchhHHHHHHHhhCC--ccceeeecCCccc---------------ccc----
Confidence 999999988777766 5689999999999999999999998 9999999985310 000
Q ss_pred CChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhcc--ChhHHHHHHHHHhcCCCCCchhHHhhhc
Q 013006 316 PLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQ--HPAAAASFASIMFAPQGNLSFREALSRC 393 (451)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l 393 (451)
+..+..+..++ ++ +..-.....+.....+..+. .......+...+ .+....+
T Consensus 124 --~~iie~~l~y~--------------~~-~kk~e~k~~e~~~~e~~~~~~~~~~~~~~~~~~i---------~~~~~~~ 177 (243)
T COG1647 124 --RIIIEGLLEYF--------------RN-AKKYEGKDQEQIDKEMKSYKDTPMTTTAQLKKLI---------KDARRSL 177 (243)
T ss_pred --hhhhHHHHHHH--------------HH-hhhccCCCHHHHHHHHHHhhcchHHHHHHHHHHH---------HHHHhhh
Confidence 01111111111 00 00000011122222222221 111122222222 3455567
Q ss_pred cCCCCCEEEEeeCCCCCCChHHHHHHHHHCC--CCcEEEeCCCCCCcccc-ChHHHHhhh
Q 013006 394 QMNGVPICLIYGKEDPWVKPVWGLQVKRQVP--EAPYYEISPAGHCPHDE-VPEVCSLCL 450 (451)
Q Consensus 394 ~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp--~~~~~~i~~~gH~~~~e-~p~~v~~~I 450 (451)
..|..|++++.|.+|+++|.+.+..+..++- ..++.+++++||.+-.+ .-|++.+.+
T Consensus 178 ~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~KeL~~~e~SgHVIt~D~Erd~v~e~V 237 (243)
T COG1647 178 DKIYSPTLVVQGRQDEMVPAESANFIYDHVESDDKELKWLEGSGHVITLDKERDQVEEDV 237 (243)
T ss_pred hhcccchhheecccCCCCCHHHHHHHHHhccCCcceeEEEccCCceeecchhHHHHHHHH
Confidence 7899999999999999999999999988874 36799999999987766 445555544
No 53
>PRK13604 luxD acyl transferase; Provisional
Probab=99.85 E-value=8.6e-20 Score=170.69 Aligned_cols=225 Identities=12% Similarity=0.122 Sum_probs=139.0
Q ss_pred cceeeecCCeEEEEeecCCC---CCCCCcEEEecCCCCChhcHHHHHHhhc-CCceEEEEcCCCC-CCCCCCCCCCCCCC
Q 013006 136 SCFWEWKPKFNVHYEKAGCE---NVNSPPVLFLPGFGVGSFHYEKQLKDLG-KDYRAWAIDFLGQ-GMSLPDEDPTPRSK 210 (451)
Q Consensus 136 ~~~~~~~~g~~l~y~~~g~~---~~~~p~VlllHG~~~~~~~~~~~~~~L~-~~~~Vi~~D~rG~-G~S~~~~~~~~~~~ 210 (451)
...+...||.+|+-...-|+ .++.++||+.||++.....+..++..|+ +||.|+.+|+||+ |.|+..-..
T Consensus 11 ~~~~~~~dG~~L~Gwl~~P~~~~~~~~~~vIi~HGf~~~~~~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~~~----- 85 (307)
T PRK13604 11 DHVICLENGQSIRVWETLPKENSPKKNNTILIASGFARRMDHFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTIDE----- 85 (307)
T ss_pred hheEEcCCCCEEEEEEEcCcccCCCCCCEEEEeCCCCCChHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCcccc-----
Confidence 45667789999998888774 2345789999999998877999999995 4899999999988 898532111
Q ss_pred CCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHh---CCCCEEEEEeCcchHHHHHHHHhCCCccceEEEe
Q 013006 211 EGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEV---IREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLL 287 (451)
Q Consensus 211 ~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l---~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~ 287 (451)
.++.....|+.++++.+ +.+++.|+||||||.+++..|+.. .++++|+.
T Consensus 86 --------------------------~t~s~g~~Dl~aaid~lk~~~~~~I~LiG~SmGgava~~~A~~~--~v~~lI~~ 137 (307)
T PRK13604 86 --------------------------FTMSIGKNSLLTVVDWLNTRGINNLGLIAASLSARIAYEVINEI--DLSFLITA 137 (307)
T ss_pred --------------------------CcccccHHHHHHHHHHHHhcCCCceEEEEECHHHHHHHHHhcCC--CCCEEEEc
Confidence 12222345554444443 567899999999999997777643 49999999
Q ss_pred ccCCCCCCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhc-CCCChHHHHHHHHhhccC
Q 013006 288 NATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYAD-HATNVDTVFTRILETTQH 366 (451)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 366 (451)
+|... ++..++. .+...+.. ......... .....
T Consensus 138 sp~~~------------------------l~d~l~~-----------------~~~~~~~~~p~~~lp~~~----d~~g~ 172 (307)
T PRK13604 138 VGVVN------------------------LRDTLER-----------------ALGYDYLSLPIDELPEDL----DFEGH 172 (307)
T ss_pred CCccc------------------------HHHHHHH-----------------hhhcccccCccccccccc----ccccc
Confidence 98642 0000000 00000000 000000000 00000
Q ss_pred hhHHHHHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCC--CCcEEEeCCCCCCcc
Q 013006 367 PAAAASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVP--EAPYYEISPAGHCPH 439 (451)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp--~~~~~~i~~~gH~~~ 439 (451)
......+....+... ........+.++++++|+|+|||++|.+||++.++++.+.++ +++++++||++|.+.
T Consensus 173 ~l~~~~f~~~~~~~~-~~~~~s~i~~~~~l~~PvLiIHG~~D~lVp~~~s~~l~e~~~s~~kkl~~i~Ga~H~l~ 246 (307)
T PRK13604 173 NLGSEVFVTDCFKHG-WDTLDSTINKMKGLDIPFIAFTANNDSWVKQSEVIDLLDSIRSEQCKLYSLIGSSHDLG 246 (307)
T ss_pred cccHHHHHHHHHhcC-ccccccHHHHHhhcCCCEEEEEcCCCCccCHHHHHHHHHHhccCCcEEEEeCCCccccC
Confidence 000000000000000 001122334455678999999999999999999999999885 688999999999865
No 54
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.84 E-value=5.1e-19 Score=178.86 Aligned_cols=252 Identities=14% Similarity=0.135 Sum_probs=153.1
Q ss_pred CCCcEEEecCCCCChhcHH-----HHHHhhc-CCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCcc
Q 013006 158 NSPPVLFLPGFGVGSFHYE-----KQLKDLG-KDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPW 231 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~~~-----~~~~~L~-~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~ 231 (451)
.++|||++||+......|+ .++..|. +||+|+++|++|+|.+...... +
T Consensus 187 ~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~~~-------------------d------ 241 (532)
T TIGR01838 187 HKTPLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADKTF-------------------D------ 241 (532)
T ss_pred CCCcEEEECcccccceeeecccchHHHHHHHHCCcEEEEEECCCCCcccccCCh-------------------h------
Confidence 5689999999988888885 6888885 5899999999999988532111 0
Q ss_pred ccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHH----HHHHhC-CCccceEEEeccCCCCCCCCCC---CC--
Q 013006 232 ASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAV----YFAACN-PHLVKGVTLLNATPFWGFSPNP---IR-- 301 (451)
Q Consensus 232 ~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val----~~A~~~-P~~v~~lvl~~~~~~~~~~~~~---~~-- 301 (451)
.|..+.+.+++..+++.++.++++++||||||.++. .+++.+ |++|++++++++...+...... ..
T Consensus 242 ----dY~~~~i~~al~~v~~~~g~~kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~~~G~l~~f~~~~ 317 (532)
T TIGR01838 242 ----DYIRDGVIAALEVVEAITGEKQVNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFSDPGELGVFVDEE 317 (532)
T ss_pred ----hhHHHHHHHHHHHHHHhcCCCCeEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCCCcchhhhhcCch
Confidence 266777888898999889999999999999999852 345555 7899999999986532211000 00
Q ss_pred -chHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHH-HHHHHHHhhcCCCChHHHHHHHHhh-ccChhH-HHHHHHHH
Q 013006 302 -SPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESI-AEVLKQVYADHATNVDTVFTRILET-TQHPAA-AASFASIM 377 (451)
Q Consensus 302 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~ 377 (451)
...+.......+.++ .. .....+..+.....+ ..++.+.+... .........+... ..-+.. ...+...+
T Consensus 318 ~~~~~e~~~~~~G~lp--g~---~m~~~F~~lrp~~l~w~~~v~~yl~g~-~~~~fdll~Wn~D~t~lP~~~~~~~lr~l 391 (532)
T TIGR01838 318 IVAGIERQNGGGGYLD--GR---QMAVTFSLLRENDLIWNYYVDNYLKGK-SPVPFDLLFWNSDSTNLPGKMHNFYLRNL 391 (532)
T ss_pred hHHHHHHHHHhcCCCC--HH---HHHHHHHhcChhhHHHHHHHHHHhcCC-CccchhHHHHhccCccchHHHHHHHHHHH
Confidence 001111111111111 11 011111111122222 22222222111 1111111111111 111111 11111111
Q ss_pred hc----CCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccChH
Q 013006 378 FA----PQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVPE 444 (451)
Q Consensus 378 ~~----~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p~ 444 (451)
+. ..+.+...+....+.+|++|+++|+|++|.++|++.++.+.+.+++.+..+++++||.+++++|.
T Consensus 392 y~~N~L~~G~~~v~g~~~dL~~I~vPvLvV~G~~D~IvP~~sa~~l~~~i~~~~~~vL~~sGHi~~ienPp 462 (532)
T TIGR01838 392 YLQNALTTGGLEVCGVRLDLSKVKVPVYIIATREDHIAPWQSAYRGAALLGGPKTFVLGESGHIAGVVNPP 462 (532)
T ss_pred HhcCCCcCCeeEECCEecchhhCCCCEEEEeeCCCCcCCHHHHHHHHHHCCCCEEEEECCCCCchHhhCCC
Confidence 11 12333344455678899999999999999999999999999999999999999999999999985
No 55
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.84 E-value=1.1e-18 Score=165.21 Aligned_cols=240 Identities=13% Similarity=0.076 Sum_probs=136.9
Q ss_pred CCeEEEEeecCCCCCCCCcEEEecCCCC----ChhcHHHHHHhhcC-CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhh
Q 013006 143 PKFNVHYEKAGCENVNSPPVLFLPGFGV----GSFHYEKQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEE 217 (451)
Q Consensus 143 ~g~~l~y~~~g~~~~~~p~VlllHG~~~----~~~~~~~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~ 217 (451)
+|.++.-...-|.++++++||++||++. +...|..+++.|++ +|+|+++|+||||.|....
T Consensus 10 ~~~~l~g~~~~p~~~~~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~-------------- 75 (274)
T TIGR03100 10 EGETLVGVLHIPGASHTTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGEN-------------- 75 (274)
T ss_pred CCcEEEEEEEcCCCCCCCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC--------------
Confidence 4555443333333334578888888653 33446677888864 7999999999999986321
Q ss_pred hhccccCCCCCCccccccccCHHHHHHHHHHHHHHh-----CCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCC
Q 013006 218 KNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEV-----IREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPF 292 (451)
Q Consensus 218 ~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l-----~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~ 292 (451)
.+++++.+|+.++++.+ +.++++++||||||.+++.+|.. +++|+++|++++...
T Consensus 76 -------------------~~~~~~~~d~~~~~~~l~~~~~g~~~i~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~~ 135 (274)
T TIGR03100 76 -------------------LGFEGIDADIAAAIDAFREAAPHLRRIVAWGLCDAASAALLYAPA-DLRVAGLVLLNPWVR 135 (274)
T ss_pred -------------------CCHHHHHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHhhh-CCCccEEEEECCccC
Confidence 35667777888777776 45789999999999999999765 468999999987411
Q ss_pred CCCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHH
Q 013006 293 WGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAAS 372 (451)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (451)
.. .. ....... ..+....... ..+...+. ...........+..... .
T Consensus 136 --~~-~~----------------~~~~~~~---~~~~~~~~~~----~~~~~~~~-g~~~~~~~~~~~~~~~~------~ 182 (274)
T TIGR03100 136 --TE-AA----------------QAASRIR---HYYLGQLLSA----DFWRKLLS-GEVNLGSSLRGLGDALL------K 182 (274)
T ss_pred --Cc-cc----------------chHHHHH---HHHHHHHhCh----HHHHHhcC-CCccHHHHHHHHHHHHH------h
Confidence 00 00 0000010 1111111111 11111111 11111111111111000 0
Q ss_pred HHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHH------HHHHHHC--CCCcEEEeCCCCCCccccC-h
Q 013006 373 FASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWG------LQVKRQV--PEAPYYEISPAGHCPHDEV-P 443 (451)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~------~~l~~~l--p~~~~~~i~~~gH~~~~e~-p 443 (451)
...............+....+.++++|+|+++|++|...+ ... .++.+.+ +++++..+++++|++..+. +
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~l~~~~~P~ll~~g~~D~~~~-~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~H~l~~e~~~ 261 (274)
T TIGR03100 183 ARQKGDEVAHGGLAERMKAGLERFQGPVLFILSGNDLTAQ-EFADSVLGEPAWRGALEDPGIERVEIDGADHTFSDRVWR 261 (274)
T ss_pred hhhcCCCcccchHHHHHHHHHHhcCCcEEEEEcCcchhHH-HHHHHhccChhhHHHhhcCCeEEEecCCCCcccccHHHH
Confidence 0000000000001134445566789999999999998864 322 4455545 7899999999999995554 4
Q ss_pred HHHHhhh
Q 013006 444 EVCSLCL 450 (451)
Q Consensus 444 ~~v~~~I 450 (451)
+++.+.|
T Consensus 262 ~~v~~~i 268 (274)
T TIGR03100 262 EWVAART 268 (274)
T ss_pred HHHHHHH
Confidence 8887765
No 56
>PRK10566 esterase; Provisional
Probab=99.81 E-value=8.6e-19 Score=163.72 Aligned_cols=123 Identities=21% Similarity=0.329 Sum_probs=80.5
Q ss_pred EEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcC-CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccC
Q 013006 146 NVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGF 224 (451)
Q Consensus 146 ~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~ 224 (451)
.++|...+..++..|+||++||++++...|..++..|++ ||+|+++|+||||.+....... ....+|
T Consensus 14 ~~~~~p~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~----------~~~~~~-- 81 (249)
T PRK10566 14 VLHAFPAGQRDTPLPTVFFYHGFTSSKLVYSYFAVALAQAGFRVIMPDAPMHGARFSGDEAR----------RLNHFW-- 81 (249)
T ss_pred eEEEcCCCCCCCCCCEEEEeCCCCcccchHHHHHHHHHhCCCEEEEecCCcccccCCCcccc----------chhhHH--
Confidence 355555544334568999999999999899999999965 7999999999999863211100 000111
Q ss_pred CCCCCccccccccCHHHHHHHHHHHHHH--hCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEec
Q 013006 225 GDKAQPWASELAYSVDLWQDQVCYFIKE--VIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLN 288 (451)
Q Consensus 225 ~~~~~~~~~~~~~s~~~~a~dv~~ll~~--l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~ 288 (451)
.....+++++.+.+..+.+. ++.++++++|||+||.+++.++.++|+....+++++
T Consensus 82 --------~~~~~~~~~~~~~~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~ 139 (249)
T PRK10566 82 --------QILLQNMQEFPTLRAAIREEGWLLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMG 139 (249)
T ss_pred --------HHHHHHHHHHHHHHHHHHhcCCcCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeC
Confidence 01112344444444343333 234789999999999999999999987444444544
No 57
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.81 E-value=1.3e-18 Score=161.23 Aligned_cols=259 Identities=25% Similarity=0.352 Sum_probs=150.4
Q ss_pred CCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcC---CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhh
Q 013006 143 PKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGK---DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKN 219 (451)
Q Consensus 143 ~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~---~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~ 219 (451)
.+..+.|...+.. +|+|+|+||++.+...|......+.. .|+|+++|+||||.|. .. .
T Consensus 8 ~~~~~~~~~~~~~---~~~i~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~g~s~-~~-~-------------- 68 (282)
T COG0596 8 DGVRLAYREAGGG---GPPLVLLHGFPGSSSVWRPVFKVLPALAARYRVIAPDLRGHGRSD-PA-G-------------- 68 (282)
T ss_pred CCeEEEEeecCCC---CCeEEEeCCCCCchhhhHHHHHHhhccccceEEEEecccCCCCCC-cc-c--------------
Confidence 4567777777753 56999999999999999884444322 2999999999999996 11 0
Q ss_pred ccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCC
Q 013006 220 FLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNP 299 (451)
Q Consensus 220 ~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~ 299 (451)
+....+++++..++++++..+++++||||||.+++.++.++|++++++|++++..........
T Consensus 69 -----------------~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~~~~~~~~~ 131 (282)
T COG0596 69 -----------------YSLSAYADDLAALLDALGLEKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAPPPGLLEAA 131 (282)
T ss_pred -----------------ccHHHHHHHHHHHHHHhCCCceEEEEecccHHHHHHHHHhcchhhheeeEecCCCCcccccCc
Confidence 355566999999999999999999999999999999999999999999999986431000000
Q ss_pred CCchHHhhhcCCCCCCCChHH-HHHHHHHHHHhcCChHHHHHHHHH----HhhcCCCChHHHHHHHHhhccChhHHHHHH
Q 013006 300 IRSPKLARILPWSGTFPLPAS-VRKLIEFIWQKISDPESIAEVLKQ----VYADHATNVDTVFTRILETTQHPAAAASFA 374 (451)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (451)
................. ... ........... . ........ ...................... ....
T Consensus 132 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 202 (282)
T COG0596 132 LRQPAGAAPLAALADLL-LGLDAAAFAALLAAL---G-LLAALAAAARAGLAEALRAPLLGAAAAAFARAAR----ADLA 202 (282)
T ss_pred cccCccccchhhhhhhh-hccchhhhhhhhhcc---c-ccccccccchhccccccccccchhHhhhhhhhcc----cccc
Confidence 00000000000000000 000 00000000000 0 00000000 0000000000000000000000 0000
Q ss_pred HHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCC-CcEEEeCCCCCCccccChHHHHhhh
Q 013006 375 SIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPE-APYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~-~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
..... ... .........+++|+++++|++|.+.+......+.+.+++ .++.+++++||++++++|+++++.+
T Consensus 203 ~~~~~---~~~-~~~~~~~~~~~~P~l~i~g~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i 275 (282)
T COG0596 203 AALLA---LLD-RDLRAALARITVPTLIIHGEDDPVVPAELARRLAAALPNDARLVVIPGAGHFPHLEAPEAFAAAL 275 (282)
T ss_pred hhhhc---ccc-cccchhhccCCCCeEEEecCCCCcCCHHHHHHHHhhCCCCceEEEeCCCCCcchhhcHHHHHHHH
Confidence 00000 000 022334567789999999999977777666777888885 8999999999999999999988765
No 58
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.81 E-value=4.6e-18 Score=166.85 Aligned_cols=116 Identities=15% Similarity=0.189 Sum_probs=86.4
Q ss_pred cCCeEEEEeecCCCCCCCCcEEEecCCCCChhcH-----HHHHHhhcC-CceEEEEcCCCCCCCCCCCCCCCCCCCCCch
Q 013006 142 KPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHY-----EKQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKEGDST 215 (451)
Q Consensus 142 ~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~-----~~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~ 215 (451)
.++.+++......+...++|||++||+..+...+ ..++..|.+ ||+|+++|++|+|.|...
T Consensus 45 ~~~~~l~~~~~~~~~~~~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~~------------- 111 (350)
T TIGR01836 45 EDKVVLYRYTPVKDNTHKTPLLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADRY------------- 111 (350)
T ss_pred cCcEEEEEecCCCCcCCCCcEEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHhc-------------
Confidence 3456666654321223456899999986655554 578888854 799999999999987421
Q ss_pred hhhhccccCCCCCCccccccccCHHHHH-----HHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccC
Q 013006 216 EEKNFLWGFGDKAQPWASELAYSVDLWQ-----DQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNAT 290 (451)
Q Consensus 216 ~~~~~~w~~~~~~~~~~~~~~~s~~~~a-----~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~ 290 (451)
.++++++ +.+..+++..+.++++++||||||++++.+++.+|++|+++|++++.
T Consensus 112 ---------------------~~~~d~~~~~~~~~v~~l~~~~~~~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p 170 (350)
T TIGR01836 112 ---------------------LTLDDYINGYIDKCVDYICRTSKLDQISLLGICQGGTFSLCYAALYPDKIKNLVTMVTP 170 (350)
T ss_pred ---------------------CCHHHHHHHHHHHHHHHHHHHhCCCcccEEEECHHHHHHHHHHHhCchheeeEEEeccc
Confidence 3555554 33445556667899999999999999999999999999999999875
Q ss_pred C
Q 013006 291 P 291 (451)
Q Consensus 291 ~ 291 (451)
.
T Consensus 171 ~ 171 (350)
T TIGR01836 171 V 171 (350)
T ss_pred c
Confidence 4
No 59
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.80 E-value=2.4e-18 Score=153.68 Aligned_cols=180 Identities=17% Similarity=0.188 Sum_probs=130.8
Q ss_pred CCCcEEEecCCCCChhcHHHHHHhhcC--CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCcccccc
Q 013006 158 NSPPVLFLPGFGVGSFHYEKQLKDLGK--DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASEL 235 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~~~~~~~~L~~--~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~ 235 (451)
..++||+.||...+......+...|+. +.+|+.+|++|+|.|...+...
T Consensus 59 ~~~~lly~hGNa~Dlgq~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE~----------------------------- 109 (258)
T KOG1552|consen 59 AHPTLLYSHGNAADLGQMVELFKELSIFLNCNVVSYDYSGYGRSSGKPSER----------------------------- 109 (258)
T ss_pred cceEEEEcCCcccchHHHHHHHHHHhhcccceEEEEecccccccCCCcccc-----------------------------
Confidence 458999999998888877777788866 7999999999999997543211
Q ss_pred ccCHHHHHHHHHHHHHHhC-CCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCchHHhhhcCCCCC
Q 013006 236 AYSVDLWQDQVCYFIKEVI-REPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGT 314 (451)
Q Consensus 236 ~~s~~~~a~dv~~ll~~l~-~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (451)
-..+|.-+....+.+..| .++++|+|+|+|+..++.+|++.| ++++||.+|...
T Consensus 110 -n~y~Di~avye~Lr~~~g~~~~Iil~G~SiGt~~tv~Lasr~~--~~alVL~SPf~S---------------------- 164 (258)
T KOG1552|consen 110 -NLYADIKAVYEWLRNRYGSPERIILYGQSIGTVPTVDLASRYP--LAAVVLHSPFTS---------------------- 164 (258)
T ss_pred -cchhhHHHHHHHHHhhcCCCceEEEEEecCCchhhhhHhhcCC--cceEEEeccchh----------------------
Confidence 133333333333344443 588999999999999999999998 999999998420
Q ss_pred CCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCCCCCchhHHhhhcc
Q 013006 315 FPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSFREALSRCQ 394 (451)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 394 (451)
.++-++... ... ..++.....+.++
T Consensus 165 --------------------------~~rv~~~~~-~~~----------------------------~~~d~f~~i~kI~ 189 (258)
T KOG1552|consen 165 --------------------------GMRVAFPDT-KTT----------------------------YCFDAFPNIEKIS 189 (258)
T ss_pred --------------------------hhhhhccCc-ceE----------------------------EeeccccccCcce
Confidence 000000000 000 0111123356678
Q ss_pred CCCCCEEEEeeCCCCCCChHHHHHHHHHCCCC-cEEEeCCCCCCccccChHHH
Q 013006 395 MNGVPICLIYGKEDPWVKPVWGLQVKRQVPEA-PYYEISPAGHCPHDEVPEVC 446 (451)
Q Consensus 395 ~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~-~~~~i~~~gH~~~~e~p~~v 446 (451)
.++||+|++||++|.+++..++.++.+..++. +..++.|+||+-..-.|+-+
T Consensus 190 ~i~~PVLiiHgtdDevv~~sHg~~Lye~~k~~~epl~v~g~gH~~~~~~~~yi 242 (258)
T KOG1552|consen 190 KITCPVLIIHGTDDEVVDFSHGKALYERCKEKVEPLWVKGAGHNDIELYPEYI 242 (258)
T ss_pred eccCCEEEEecccCceecccccHHHHHhccccCCCcEEecCCCcccccCHHHH
Confidence 89999999999999999999999999999885 88899999999776666543
No 60
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.78 E-value=1.2e-17 Score=184.43 Aligned_cols=250 Identities=18% Similarity=0.198 Sum_probs=139.1
Q ss_pred CCCcEEEecCCCCChhcHHHH-----HHhh-cCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCcc
Q 013006 158 NSPPVLFLPGFGVGSFHYEKQ-----LKDL-GKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPW 231 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~~~~~-----~~~L-~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~ 231 (451)
.++||||+||++.+...|+.+ ++.| .++|+|+++|+ |.++.+....
T Consensus 66 ~~~plllvhg~~~~~~~~d~~~~~s~v~~L~~~g~~v~~~d~---G~~~~~~~~~------------------------- 117 (994)
T PRK07868 66 VGPPVLMVHPMMMSADMWDVTRDDGAVGILHRAGLDPWVIDF---GSPDKVEGGM------------------------- 117 (994)
T ss_pred CCCcEEEECCCCCCccceecCCcccHHHHHHHCCCEEEEEcC---CCCChhHcCc-------------------------
Confidence 568999999999999999875 7888 45799999994 6655332110
Q ss_pred ccccccCHHHHHHHHHHHHHH---hCCCCEEEEEeCcchHHHHHHHHhC-CCccceEEEeccCCCCCCCCCCCCch-HH-
Q 013006 232 ASELAYSVDLWQDQVCYFIKE---VIREPVYVVGNSLGGFVAVYFAACN-PHLVKGVTLLNATPFWGFSPNPIRSP-KL- 305 (451)
Q Consensus 232 ~~~~~~s~~~~a~dv~~ll~~---l~~~~v~lvGhS~GG~val~~A~~~-P~~v~~lvl~~~~~~~~~~~~~~~~~-~~- 305 (451)
.+++.+++..+.+.++. +..++++++||||||++++.+|+.+ |++|+++|++++...+... .+...+ ..
T Consensus 118 ----~~~l~~~i~~l~~~l~~v~~~~~~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d~~~~-~~~~~~~~~~ 192 (994)
T PRK07868 118 ----ERNLADHVVALSEAIDTVKDVTGRDVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVDTLAA-LPMGIPAGLA 192 (994)
T ss_pred ----cCCHHHHHHHHHHHHHHHHHhhCCceEEEEEChhHHHHHHHHHhcCCCccceEEEEecccccCCC-Ccccchhhhh
Confidence 14777777666666654 3457899999999999999998855 5689999998876432111 000000 00
Q ss_pred hhhcCC-----CCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhc---cChh-HHHHHHHH
Q 013006 306 ARILPW-----SGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETT---QHPA-AAASFASI 376 (451)
Q Consensus 306 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~ 376 (451)
.....+ .....+|.........+............++...........++....++... ..+. ....+...
T Consensus 193 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~p~~~~~~~~~~~~~l~~~~~~~~~e~~~~~~~~~~w~~~~g~~~~~~~~~ 272 (994)
T PRK07868 193 AAAADFMADHVFNRLDIPGWMARTGFQMLDPVKTAKARVDFLRQLHDREALLPREQQRRFLESEGWIAWSGPAISELLKQ 272 (994)
T ss_pred hcccccchhhhhhcCCCCHHHHHHHHHhcChhHHHHHHHHHHHhcCchhhhccchhhHhHHHHhhccccchHHHHHHHHH
Confidence 000000 01112222211111111000000011111122222111111111112222111 1111 11222222
Q ss_pred HhcC----CCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcE-EEeCCCCCCccc
Q 013006 377 MFAP----QGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPY-YEISPAGHCPHD 440 (451)
Q Consensus 377 ~~~~----~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~-~~i~~~gH~~~~ 440 (451)
+... .+.+........++++++|+|+|+|++|.++|++..+.+.+.+|++++ .+++++||+.++
T Consensus 273 ~~~~n~~~~g~~~~~~~~~~L~~i~~P~L~i~G~~D~ivp~~~~~~l~~~i~~a~~~~~~~~~GH~g~~ 341 (994)
T PRK07868 273 FIAHNRMMTGGFAINGQMVTLADITCPVLAFVGEVDDIGQPASVRGIRRAAPNAEVYESLIRAGHFGLV 341 (994)
T ss_pred HHHhCcccCceEEECCEEcchhhCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCeEEEEeCCCCCEeee
Confidence 2111 111111122234788999999999999999999999999999999987 678999999654
No 61
>PRK11071 esterase YqiA; Provisional
Probab=99.78 E-value=2.5e-18 Score=153.28 Aligned_cols=86 Identities=20% Similarity=0.272 Sum_probs=72.5
Q ss_pred CcEEEecCCCCChhcHHH--HHHhhcC---CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccc
Q 013006 160 PPVLFLPGFGVGSFHYEK--QLKDLGK---DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASE 234 (451)
Q Consensus 160 p~VlllHG~~~~~~~~~~--~~~~L~~---~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 234 (451)
|+|||+||++++...|.. +...|++ +|+|+++|+||++
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~------------------------------------- 44 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP------------------------------------- 44 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH-------------------------------------
Confidence 689999999999999984 3355543 7999999999873
Q ss_pred cccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccC
Q 013006 235 LAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNAT 290 (451)
Q Consensus 235 ~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~ 290 (451)
+++++++.+++++++.++++++||||||.+++.+|.++|. ++|+++|+
T Consensus 45 -----~~~~~~l~~l~~~~~~~~~~lvG~S~Gg~~a~~~a~~~~~---~~vl~~~~ 92 (190)
T PRK11071 45 -----ADAAELLESLVLEHGGDPLGLVGSSLGGYYATWLSQCFML---PAVVVNPA 92 (190)
T ss_pred -----HHHHHHHHHHHHHcCCCCeEEEEECHHHHHHHHHHHHcCC---CEEEECCC
Confidence 1457788899999999999999999999999999999983 46888875
No 62
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.77 E-value=8.3e-17 Score=151.01 Aligned_cols=287 Identities=15% Similarity=0.178 Sum_probs=174.8
Q ss_pred CCeEEEEeecCCCCCCC-CcEEEecCCCCChhc-----------HHHHHH---hh-cCCceEEEEcCCCCC-CCCCCCCC
Q 013006 143 PKFNVHYEKAGCENVNS-PPVLFLPGFGVGSFH-----------YEKQLK---DL-GKDYRAWAIDFLGQG-MSLPDEDP 205 (451)
Q Consensus 143 ~g~~l~y~~~g~~~~~~-p~VlllHG~~~~~~~-----------~~~~~~---~L-~~~~~Vi~~D~rG~G-~S~~~~~~ 205 (451)
++..|.|+.+|..+..+ ..||++|++.+++.. |+.++. .+ ...|.||+.|..|.+ .|..|...
T Consensus 34 ~~~~vay~T~Gtln~~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~ 113 (368)
T COG2021 34 SDARVAYETYGTLNAEKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSI 113 (368)
T ss_pred cCcEEEEEecccccccCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCc
Confidence 46899999999876543 578889999886543 444442 23 236999999999977 55544433
Q ss_pred CCCCCCCCchhhhhccccCCCCCCcccccc-ccCHHHHHHHHHHHHHHhCCCCEE-EEEeCcchHHHHHHHHhCCCccce
Q 013006 206 TPRSKEGDSTEEKNFLWGFGDKAQPWASEL-AYSVDLWQDQVCYFIKEVIREPVY-VVGNSLGGFVAVYFAACNPHLVKG 283 (451)
Q Consensus 206 ~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~-~~s~~~~a~dv~~ll~~l~~~~v~-lvGhS~GG~val~~A~~~P~~v~~ 283 (451)
.+. .++|..++ .+|+.|+++.-+.++++||++++. +||-|||||.+++++..||++|++
T Consensus 114 ~p~-------------------g~~yg~~FP~~ti~D~V~aq~~ll~~LGI~~l~avvGgSmGGMqaleWa~~yPd~V~~ 174 (368)
T COG2021 114 NPG-------------------GKPYGSDFPVITIRDMVRAQRLLLDALGIKKLAAVVGGSMGGMQALEWAIRYPDRVRR 174 (368)
T ss_pred CCC-------------------CCccccCCCcccHHHHHHHHHHHHHhcCcceEeeeeccChHHHHHHHHHHhChHHHhh
Confidence 221 12332222 489999999999999999999987 899999999999999999999999
Q ss_pred EEEeccCCCCCCCCCCCCch-----HHhhhcCCCCC-C---CChHHHHHHHHH-HHHhcCChHHHHHHHHHHhhcCCCC-
Q 013006 284 VTLLNATPFWGFSPNPIRSP-----KLARILPWSGT-F---PLPASVRKLIEF-IWQKISDPESIAEVLKQVYADHATN- 352 (451)
Q Consensus 284 lvl~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~-~---~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~- 352 (451)
++.+++++... +...... ....-..|.+. + ..|..--++.++ ..-....++.+.+.+.+........
T Consensus 175 ~i~ia~~~r~s--~~~ia~~~~~r~AI~~DP~~n~G~Y~~~~~P~~GL~~AR~l~~ltYrS~~~~~~rF~r~~~~~~~~~ 252 (368)
T COG2021 175 AIPIATAARLS--AQNIAFNEVQRQAIEADPDWNGGDYYEGTQPERGLRLARMLAHLTYRSEEELDERFGRRLQADPLRG 252 (368)
T ss_pred hheecccccCC--HHHHHHHHHHHHHHHhCCCccCCCccCCCCcchhHHHHHHHHHHHccCHHHHHHHhcccccccccCC
Confidence 99999864311 0000000 01111222211 0 112222222222 2222334444433332211111111
Q ss_pred --hHHHHHHHHhhcc-------ChhHHHHHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHC
Q 013006 353 --VDTVFTRILETTQ-------HPAAAASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQV 423 (451)
Q Consensus 353 --~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~l 423 (451)
.....+.++.... ++...-.+...+..........+....++++++|+|++.-+.|.+.|++..+++.+.+
T Consensus 253 ~~~~f~vESYL~~qg~kf~~rfDaNsYL~lt~ald~~D~s~~~~~l~~al~~i~~~~lv~gi~sD~lfp~~~~~~~~~~L 332 (368)
T COG2021 253 GGVRFAVESYLDYQGDKFVARFDANSYLYLTRALDYHDVSRGRGDLTAALARIKAPVLVVGITSDWLFPPELQRALAEAL 332 (368)
T ss_pred CchhHHHHHHHHHHHHHHHhccCcchHHHHHHHHHhcCCCCCcCcHHHHHhcCccCEEEEEecccccCCHHHHHHHHHhc
Confidence 1112222222211 1222222222222222223335666778899999999999999999999999999999
Q ss_pred CCCc-EEEeC-CCCCCccccChHHHHhhh
Q 013006 424 PEAP-YYEIS-PAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 424 p~~~-~~~i~-~~gH~~~~e~p~~v~~~I 450 (451)
+.+. +++|+ ..||.-++...+.+...|
T Consensus 333 ~~~~~~~~i~S~~GHDaFL~e~~~~~~~i 361 (368)
T COG2021 333 PAAGALREIDSPYGHDAFLVESEAVGPLI 361 (368)
T ss_pred cccCceEEecCCCCchhhhcchhhhhHHH
Confidence 9877 77765 469998888777765543
No 63
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.75 E-value=1.4e-17 Score=141.79 Aligned_cols=143 Identities=28% Similarity=0.404 Sum_probs=112.0
Q ss_pred cEEEecCCCCChhcHHHHHHhhcC-CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccccCH
Q 013006 161 PVLFLPGFGVGSFHYEKQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSV 239 (451)
Q Consensus 161 ~VlllHG~~~~~~~~~~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~ 239 (451)
+|||+||++.+...|..++..|++ +|.|+.+|+||+|.+... ...
T Consensus 1 ~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~----------------------------------~~~ 46 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQPLAEALAEQGYAVVAFDYPGHGDSDGA----------------------------------DAV 46 (145)
T ss_dssp EEEEECTTTTTTHHHHHHHHHHHHTTEEEEEESCTTSTTSHHS----------------------------------HHH
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEecCCCCccchh----------------------------------HHH
Confidence 589999999999999999999854 799999999999998311 233
Q ss_pred HHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCchHHhhhcCCCCCCCChH
Q 013006 240 DLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPA 319 (451)
Q Consensus 240 ~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (451)
+++.+++. .+..+.++++++|||+||.+++.++.++ .+++++|++++.+
T Consensus 47 ~~~~~~~~--~~~~~~~~i~l~G~S~Gg~~a~~~~~~~-~~v~~~v~~~~~~---------------------------- 95 (145)
T PF12695_consen 47 ERVLADIR--AGYPDPDRIILIGHSMGGAIAANLAARN-PRVKAVVLLSPYP---------------------------- 95 (145)
T ss_dssp HHHHHHHH--HHHCTCCEEEEEEETHHHHHHHHHHHHS-TTESEEEEESESS----------------------------
T ss_pred HHHHHHHH--hhcCCCCcEEEEEEccCcHHHHHHhhhc-cceeEEEEecCcc----------------------------
Confidence 33333333 1123668999999999999999999998 6899999999721
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCCCCCchhHHhhhccCCCCC
Q 013006 320 SVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSFREALSRCQMNGVP 399 (451)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P 399 (451)
+ ...+.+.++|
T Consensus 96 --------------------------------------------------------------------~-~~~~~~~~~p 106 (145)
T PF12695_consen 96 --------------------------------------------------------------------D-SEDLAKIRIP 106 (145)
T ss_dssp --------------------------------------------------------------------G-CHHHTTTTSE
T ss_pred --------------------------------------------------------------------c-hhhhhccCCc
Confidence 0 1112345779
Q ss_pred EEEEeeCCCCCCChHHHHHHHHHCC-CCcEEEeCCCCCC
Q 013006 400 ICLIYGKEDPWVKPVWGLQVKRQVP-EAPYYEISPAGHC 437 (451)
Q Consensus 400 vLii~G~~D~~v~~~~~~~l~~~lp-~~~~~~i~~~gH~ 437 (451)
+++++|++|..++++..+++.+.++ ..+++++++++|+
T Consensus 107 v~~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 107 VLFIHGENDPLVPPEQVRRLYEALPGPKELYIIPGAGHF 145 (145)
T ss_dssp EEEEEETT-SSSHHHHHHHHHHHHCSSEEEEEETTS-TT
T ss_pred EEEEEECCCCcCCHHHHHHHHHHcCCCcEEEEeCCCcCc
Confidence 9999999999999999999988887 4789999999996
No 64
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.72 E-value=6e-17 Score=144.74 Aligned_cols=114 Identities=23% Similarity=0.369 Sum_probs=94.3
Q ss_pred EEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcC--CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhcccc
Q 013006 146 NVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGK--DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWG 223 (451)
Q Consensus 146 ~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~--~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~ 223 (451)
++..+..++..+.+|.++++||.+.+.-.|..++..|.. ..+++++|+||||.+...+..
T Consensus 61 t~n~Y~t~~~~t~gpil~l~HG~G~S~LSfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e~------------------ 122 (343)
T KOG2564|consen 61 TFNVYLTLPSATEGPILLLLHGGGSSALSFAIFASELKSKIRCRCLALDLRGHGETKVENED------------------ 122 (343)
T ss_pred eEEEEEecCCCCCccEEEEeecCcccchhHHHHHHHHHhhcceeEEEeeccccCccccCChh------------------
Confidence 455555565556789999999999999999999999954 578899999999999654322
Q ss_pred CCCCCCccccccccCHHHHHHHHHHHHHHhC---CCCEEEEEeCcchHHHHHHHHh--CCCccceEEEeccC
Q 013006 224 FGDKAQPWASELAYSVDLWQDQVCYFIKEVI---REPVYVVGNSLGGFVAVYFAAC--NPHLVKGVTLLNAT 290 (451)
Q Consensus 224 ~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~---~~~v~lvGhS~GG~val~~A~~--~P~~v~~lvl~~~~ 290 (451)
..+.+.++.|+.++++.+= ..+++||||||||.||.+.|.. -|. +.++++++..
T Consensus 123 ------------dlS~eT~~KD~~~~i~~~fge~~~~iilVGHSmGGaIav~~a~~k~lps-l~Gl~viDVV 181 (343)
T KOG2564|consen 123 ------------DLSLETMSKDFGAVIKELFGELPPQIILVGHSMGGAIAVHTAASKTLPS-LAGLVVIDVV 181 (343)
T ss_pred ------------hcCHHHHHHHHHHHHHHHhccCCCceEEEeccccchhhhhhhhhhhchh-hhceEEEEEe
Confidence 2799999999999999883 4679999999999999888775 465 9999999864
No 65
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.69 E-value=4.6e-16 Score=144.89 Aligned_cols=101 Identities=23% Similarity=0.288 Sum_probs=82.9
Q ss_pred CCcEEEecCCCCC----hhcHHHHHHhhc-CCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCcccc
Q 013006 159 SPPVLFLPGFGVG----SFHYEKQLKDLG-KDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWAS 233 (451)
Q Consensus 159 ~p~VlllHG~~~~----~~~~~~~~~~L~-~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~ 233 (451)
.++|||+||++.. ...|..+++.|+ .+|+|+++|+||||.|......
T Consensus 25 ~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~~---------------------------- 76 (266)
T TIGR03101 25 RGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFAA---------------------------- 76 (266)
T ss_pred ceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCcccc----------------------------
Confidence 5789999999864 345777888886 5899999999999999643211
Q ss_pred ccccCHHHHHHHHHHHHH---HhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccC
Q 013006 234 ELAYSVDLWQDQVCYFIK---EVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNAT 290 (451)
Q Consensus 234 ~~~~s~~~~a~dv~~ll~---~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~ 290 (451)
.+++.+++|+..+++ +.+.++++|+||||||.+++.+|.++|++++++|+++|.
T Consensus 77 ---~~~~~~~~Dv~~ai~~L~~~~~~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~ 133 (266)
T TIGR03101 77 ---ARWDVWKEDVAAAYRWLIEQGHPPVTLWGLRLGALLALDAANPLAAKCNRLVLWQPV 133 (266)
T ss_pred ---CCHHHHHHHHHHHHHHHHhcCCCCEEEEEECHHHHHHHHHHHhCccccceEEEeccc
Confidence 467788888777554 446789999999999999999999999999999999985
No 66
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.68 E-value=5.8e-15 Score=133.69 Aligned_cols=239 Identities=15% Similarity=0.211 Sum_probs=153.4
Q ss_pred eEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcC-CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhcccc
Q 013006 145 FNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWG 223 (451)
Q Consensus 145 ~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~ 223 (451)
++--|.+..+......+||=+||-+++...|..+.+.|.+ +.|+|.+++||+|.+...+..
T Consensus 21 ~~a~y~D~~~~gs~~gTVv~~hGsPGSH~DFkYi~~~l~~~~iR~I~iN~PGf~~t~~~~~~------------------ 82 (297)
T PF06342_consen 21 VQAVYEDSLPSGSPLGTVVAFHGSPGSHNDFKYIRPPLDEAGIRFIGINYPGFGFTPGYPDQ------------------ 82 (297)
T ss_pred EEEEEEecCCCCCCceeEEEecCCCCCccchhhhhhHHHHcCeEEEEeCCCCCCCCCCCccc------------------
Confidence 3445666654322334899999999999999999999954 899999999999999765443
Q ss_pred CCCCCCccccccccCHHHHHHHHHHHHHHhCC-CCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCc
Q 013006 224 FGDKAQPWASELAYSVDLWQDQVCYFIKEVIR-EPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRS 302 (451)
Q Consensus 224 ~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~-~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~ 302 (451)
.|+-.+-..-+.++++.+++ ++++++|||.|+-.|+.+|..+| +.++++++|.. +.+.-...
T Consensus 83 ------------~~~n~er~~~~~~ll~~l~i~~~~i~~gHSrGcenal~la~~~~--~~g~~lin~~G---~r~HkgIr 145 (297)
T PF06342_consen 83 ------------QYTNEERQNFVNALLDELGIKGKLIFLGHSRGCENALQLAVTHP--LHGLVLINPPG---LRPHKGIR 145 (297)
T ss_pred ------------ccChHHHHHHHHHHHHHcCCCCceEEEEeccchHHHHHHHhcCc--cceEEEecCCc---cccccCcC
Confidence 28999999999999999998 56889999999999999999996 67999999974 23222211
Q ss_pred hHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHH----HHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHh
Q 013006 303 PKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEV----LKQVYADHATNVDTVFTRILETTQHPAAAASFASIMF 378 (451)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (451)
+ ...-....+++..+ +..+... +.+++.-+-..-++.. .++.....
T Consensus 146 p---------------~~r~~~i~~l~~~l--p~~~~~~i~~~~y~~iG~KV~~GeeA~-------------na~r~m~~ 195 (297)
T PF06342_consen 146 P---------------LSRMETINYLYDLL--PRFIINAIMYFYYRMIGFKVSDGEEAI-------------NAMRSMQN 195 (297)
T ss_pred H---------------HHHHHHHHHHHHHh--hHHHHHHHHHHHHHHhCeeecChHHHH-------------HHHHHHHh
Confidence 1 01111111111111 1111111 1111221111111111 11111110
Q ss_pred cCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCC---------------------------CcEEEe
Q 013006 379 APQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPE---------------------------APYYEI 431 (451)
Q Consensus 379 ~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~---------------------------~~~~~i 431 (451)
.. .....+.++.+.+.++|+++++|.+|.++..+...+++..+.+ ..-+.+
T Consensus 196 ~d--f~~q~~~I~~ln~~~ikvli~ygg~DhLIEeeI~~E~a~~f~~l~Hf~~~~~~seee~~kI~~~f~~~~~~~sv~f 273 (297)
T PF06342_consen 196 CD--FEEQKEYIDKLNKKPIKVLIAYGGKDHLIEEEISFEFAMKFKGLDHFNIEKEISEEEKPKILKSFASGQKGASVFF 273 (297)
T ss_pred cC--HHHHHHHHHHhccCCCcEEEEEcCcchhhHHHHHHHHHHHhCCccceeeecCCChhHHHHHHHHHhcCCceeEEEE
Confidence 00 0111344556777789999999999999887766665444321 113456
Q ss_pred CCCCCCccccChHHHHhhh
Q 013006 432 SPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 432 ~~~gH~~~~e~p~~v~~~I 450 (451)
.+.||+.+-.+++-+++.+
T Consensus 274 ~~dgHf~qK~~A~lIA~~i 292 (297)
T PF06342_consen 274 AKDGHFQQKFRADLIAEAI 292 (297)
T ss_pred ecCChHHhHHHHHHHHHHH
Confidence 7789999999999888765
No 67
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.67 E-value=8.9e-16 Score=132.16 Aligned_cols=198 Identities=17% Similarity=0.175 Sum_probs=136.6
Q ss_pred ceeeecCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhh--cCCceEEEEcCCCCCCCCCCCCCCCCCCCCCc
Q 013006 137 CFWEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDL--GKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDS 214 (451)
Q Consensus 137 ~~~~~~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L--~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~ 214 (451)
....++|.++++-..--.++ ++|++|++|+..++..+.-+++.-+ .-+.+|+.+++||+|.|+..+..
T Consensus 57 i~l~T~D~vtL~a~~~~~E~-S~pTlLyfh~NAGNmGhr~~i~~~fy~~l~mnv~ivsYRGYG~S~GspsE--------- 126 (300)
T KOG4391|consen 57 IELRTRDKVTLDAYLMLSES-SRPTLLYFHANAGNMGHRLPIARVFYVNLKMNVLIVSYRGYGKSEGSPSE--------- 126 (300)
T ss_pred EEEEcCcceeEeeeeecccC-CCceEEEEccCCCcccchhhHHHHHHHHcCceEEEEEeeccccCCCCccc---------
Confidence 34456789999877666554 7899999999999988887777665 33689999999999999854322
Q ss_pred hhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHh------CCCCEEEEEeCcchHHHHHHHHhCCCccceEEEec
Q 013006 215 TEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEV------IREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLN 288 (451)
Q Consensus 215 ~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l------~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~ 288 (451)
+.+.-|-+++++.+ ...++++.|.|+||++|+.+|+++.+++.++|+-+
T Consensus 127 -------------------------~GL~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~ivEN 181 (300)
T KOG4391|consen 127 -------------------------EGLKLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVEN 181 (300)
T ss_pred -------------------------cceeccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhheeeeeeec
Confidence 22333444555554 34679999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChh
Q 013006 289 ATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPA 368 (451)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (451)
+.... +. ...... ++. ..+.+..+...+ .
T Consensus 182 TF~SI---------p~--~~i~~v--~p~--------------------~~k~i~~lc~kn----------~-------- 210 (300)
T KOG4391|consen 182 TFLSI---------PH--MAIPLV--FPF--------------------PMKYIPLLCYKN----------K-------- 210 (300)
T ss_pred hhccc---------hh--hhhhee--ccc--------------------hhhHHHHHHHHh----------h--------
Confidence 74210 00 000000 000 000000000000 0
Q ss_pred HHHHHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCC--CcEEEeCCCCCCc
Q 013006 369 AAASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPE--APYYEISPAGHCP 438 (451)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~--~~~~~i~~~gH~~ 438 (451)
+ .....+++.+.|.|+|.|..|.+|||.+.+++.+.+|. .++.++|++.|.-
T Consensus 211 --------------~----~S~~ki~~~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~~Krl~eFP~gtHND 264 (300)
T KOG4391|consen 211 --------------W----LSYRKIGQCRMPFLFISGLKDELVPPVMMRQLYELCPSRTKRLAEFPDGTHND 264 (300)
T ss_pred --------------h----cchhhhccccCceEEeecCccccCCcHHHHHHHHhCchhhhhheeCCCCccCc
Confidence 0 01112345689999999999999999999999999985 5789999999964
No 68
>PRK11460 putative hydrolase; Provisional
Probab=99.67 E-value=1.8e-15 Score=139.39 Aligned_cols=182 Identities=15% Similarity=0.152 Sum_probs=115.6
Q ss_pred CCCCcEEEecCCCCChhcHHHHHHhhcC-CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCc-cccc
Q 013006 157 VNSPPVLFLPGFGVGSFHYEKQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQP-WASE 234 (451)
Q Consensus 157 ~~~p~VlllHG~~~~~~~~~~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~-~~~~ 234 (451)
+..++|||+||++++...|..+++.|.+ .+.+..++.+|...+.... ...++........ ....
T Consensus 14 ~~~~~vIlLHG~G~~~~~~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~--------------g~~W~~~~~~~~~~~~~~ 79 (232)
T PRK11460 14 PAQQLLLLFHGVGDNPVAMGEIGSWFAPAFPDALVVSVGGPEPSGNGA--------------GRQWFSVQGITEDNRQAR 79 (232)
T ss_pred CCCcEEEEEeCCCCChHHHHHHHHHHHHHCCCCEEECCCCCCCcCCCC--------------CcccccCCCCCccchHHH
Confidence 3568999999999999999999999965 3455666666654331110 0111111000000 0000
Q ss_pred cccCHHHHHHHHHHHHHHhCC--CCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCchHHhhhcCCC
Q 013006 235 LAYSVDLWQDQVCYFIKEVIR--EPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWS 312 (451)
Q Consensus 235 ~~~s~~~~a~dv~~ll~~l~~--~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (451)
.....+.+.+.+..+.+.+++ ++++++|||+||.+++.++.++|+.+.+++.+++...
T Consensus 80 ~~~~~~~l~~~i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~-------------------- 139 (232)
T PRK11460 80 VAAIMPTFIETVRYWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYA-------------------- 139 (232)
T ss_pred HHHHHHHHHHHHHHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEeccccc--------------------
Confidence 011122233333344444444 5799999999999999999999988888887764200
Q ss_pred CCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCCCCCchhHHhhh
Q 013006 313 GTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSFREALSR 392 (451)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (451)
.. + .
T Consensus 140 -~~-------------------~----------------------------------------------------~---- 143 (232)
T PRK11460 140 -SL-------------------P----------------------------------------------------E---- 143 (232)
T ss_pred -cc-------------------c----------------------------------------------------c----
Confidence 00 0 0
Q ss_pred ccCCCCCEEEEeeCCCCCCChHHHHHHHHHCC----CCcEEEeCCCCCCccccChHHHHh
Q 013006 393 CQMNGVPICLIYGKEDPWVKPVWGLQVKRQVP----EAPYYEISPAGHCPHDEVPEVCSL 448 (451)
Q Consensus 393 l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp----~~~~~~i~~~gH~~~~e~p~~v~~ 448 (451)
....+.|++++||++|+++|.+.++++.+.+. ++++++++++||.+..+.-+.+.+
T Consensus 144 ~~~~~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~~gH~i~~~~~~~~~~ 203 (232)
T PRK11460 144 TAPTATTIHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIVEDLGHAIDPRLMQFALD 203 (232)
T ss_pred cccCCCcEEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCHHHHHHHHH
Confidence 00136799999999999999999988877664 357888999999987555554443
No 69
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=99.67 E-value=2e-15 Score=146.78 Aligned_cols=305 Identities=15% Similarity=0.143 Sum_probs=180.2
Q ss_pred CCCCCccceeeecCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHH------HHHhhcC-CceEEEEcCCCCCCCCCC
Q 013006 130 SGAPITSCFWEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEK------QLKDLGK-DYRAWAIDFLGQGMSLPD 202 (451)
Q Consensus 130 ~~~~~~~~~~~~~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~------~~~~L~~-~~~Vi~~D~rG~G~S~~~ 202 (451)
.|.+++....++.||.-+..........++|+|+|.||+..++..|-. +.-.|++ ||+||.-+.||...|...
T Consensus 44 ~gy~~E~h~V~T~DgYiL~lhRIp~~~~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr~h 123 (403)
T KOG2624|consen 44 YGYPVEEHEVTTEDGYILTLHRIPRGKKKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSRKH 123 (403)
T ss_pred cCCceEEEEEEccCCeEEEEeeecCCCCCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcCcccchhh
Confidence 367788888888998755544333222478999999999999999954 3344554 899999999999999766
Q ss_pred CCCCCCCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCC---
Q 013006 203 EDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPH--- 279 (451)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~--- 279 (451)
....+ ....+||.| .|++...|++..+++.| ++..+.++++.||||.|+.+.+.++...|+
T Consensus 124 ~~l~~--------~~~~~FW~F-----S~~Em~~yDLPA~IdyI---L~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~ 187 (403)
T KOG2624|consen 124 KKLSP--------SSDKEFWDF-----SWHEMGTYDLPAMIDYI---LEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNK 187 (403)
T ss_pred cccCC--------cCCcceeec-----chhhhhhcCHHHHHHHH---HHhccccceEEEEEEccchhheehhcccchhhh
Confidence 54432 125679999 67776667776666555 677788999999999999999999998876
Q ss_pred ccceEEEeccCCCCCCCCCCCCch---------HHhhhcCCCCCCCChHHHHHHHHHHHHhc-CChHHHHHHHHHHhhcC
Q 013006 280 LVKGVTLLNATPFWGFSPNPIRSP---------KLARILPWSGTFPLPASVRKLIEFIWQKI-SDPESIAEVLKQVYADH 349 (451)
Q Consensus 280 ~v~~lvl~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 349 (451)
+|+.+++++|+.+......+.... ....++.....++.....+.+...++... .....+...+......+
T Consensus 188 kI~~~~aLAP~~~~k~~~~~~~~~~~~~~~~~~~~~~~fg~~~f~p~~~~~~~~~~~~C~~~~~~~~lC~~~~~~~~G~~ 267 (403)
T KOG2624|consen 188 KIKSFIALAPAAFPKHIKSLLNKFLDPFLGAFSLLPLLFGRKEFLPSNLFIKKFARKICSGSKIFADLCSNFLFLLVGWN 267 (403)
T ss_pred hhheeeeecchhhhcccccHHHHhhhhhhhhhhHHHHhcCCccccchhhHHHHHHHHHhcchhHHHHHHHHHHHHHcCcc
Confidence 799999999987543111110000 11222222223333333333444333311 11122222333232222
Q ss_pred CCChHHHHH-HHHhhccChhHHHHHHHHHhc----CCCCCch------------hHHhhhccCCCCCEEEEeeCCCCCCC
Q 013006 350 ATNVDTVFT-RILETTQHPAAAASFASIMFA----PQGNLSF------------REALSRCQMNGVPICLIYGKEDPWVK 412 (451)
Q Consensus 350 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~----~~~~~~~------------~~~~~~l~~i~~PvLii~G~~D~~v~ 412 (451)
......... .++..............+... ....+++ ......+.++++||.+.+|++|.++.
T Consensus 268 ~~~~n~~~~~~~~~h~pagtSvk~~~H~~Q~~~s~~f~~yD~G~~~N~~~Y~q~~pP~Y~l~~i~~P~~l~~g~~D~l~~ 347 (403)
T KOG2624|consen 268 SNNWNTTLLPVYLAHLPAGTSVKNIVHWAQIVRSGKFRKYDYGSKRNLKHYGQSTPPEYDLTNIKVPTALYYGDNDWLAD 347 (403)
T ss_pred hHhhhhcccchhhccCCCCccHHHHHHHHHHhcCCCccccCCCccccHhhcCCCCCCCCCccccccCEEEEecCCcccCC
Confidence 221111110 011111111111111111110 0001111 11222567789999999999999999
Q ss_pred hHHHHHHHHHCCCCcEEE---eCCCCCCcc---ccChHHHHhhh
Q 013006 413 PVWGLQVKRQVPEAPYYE---ISPAGHCPH---DEVPEVCSLCL 450 (451)
Q Consensus 413 ~~~~~~l~~~lp~~~~~~---i~~~gH~~~---~e~p~~v~~~I 450 (451)
++....+....+++.... +++-.|.-+ .+.++++.+.|
T Consensus 348 ~~DV~~~~~~~~~~~~~~~~~~~~ynHlDFi~g~da~~~vy~~v 391 (403)
T KOG2624|consen 348 PEDVLILLLVLPNSVIKYIVPIPEYNHLDFIWGLDAKEEVYDPV 391 (403)
T ss_pred HHHHHHHHHhcccccccccccCCCccceeeeeccCcHHHHHHHH
Confidence 999998888888765432 677777533 34577776654
No 70
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.65 E-value=8.4e-15 Score=138.75 Aligned_cols=130 Identities=19% Similarity=0.281 Sum_probs=88.4
Q ss_pred cCCeEEEEeecCCC---CCCCCcEEEecCCCCChhcHHH--HHHhhcC--CceEEEEcC--CCCCCCCCCCCCCCCCCCC
Q 013006 142 KPKFNVHYEKAGCE---NVNSPPVLFLPGFGVGSFHYEK--QLKDLGK--DYRAWAIDF--LGQGMSLPDEDPTPRSKEG 212 (451)
Q Consensus 142 ~~g~~l~y~~~g~~---~~~~p~VlllHG~~~~~~~~~~--~~~~L~~--~~~Vi~~D~--rG~G~S~~~~~~~~~~~~~ 212 (451)
.-+..+.|..+.|+ ..+.|+|+|+||++.+...|.. .+..|+. ++.|+++|. +|+|.+...
T Consensus 22 ~~~~~~~~~v~~P~~~~~~~~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~---------- 91 (275)
T TIGR02821 22 TCGVPMTFGVFLPPQAAAGPVPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGED---------- 91 (275)
T ss_pred ccCCceEEEEEcCCCccCCCCCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCc----------
Confidence 34666667666653 2346899999999999888854 3345533 799999998 555544211
Q ss_pred CchhhhhccccCCCC--------CCccccccccCHH-HHHHHHHHHHHH---hCCCCEEEEEeCcchHHHHHHHHhCCCc
Q 013006 213 DSTEEKNFLWGFGDK--------AQPWASELAYSVD-LWQDQVCYFIKE---VIREPVYVVGNSLGGFVAVYFAACNPHL 280 (451)
Q Consensus 213 ~~~~~~~~~w~~~~~--------~~~~~~~~~~s~~-~~a~dv~~ll~~---l~~~~v~lvGhS~GG~val~~A~~~P~~ 280 (451)
..|.++.. ..++. ..++.. .+++++..++++ ++.++++++||||||++++.++.++|+.
T Consensus 92 -------~~w~~g~~~~~~~d~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~ 162 (275)
T TIGR02821 92 -------DAWDFGKGAGFYVDATEEPWS--QHYRMYSYIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDR 162 (275)
T ss_pred -------ccccccCCccccccCCcCccc--ccchHHHHHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCccc
Confidence 11221110 00111 113433 446788888887 3557899999999999999999999999
Q ss_pred cceEEEeccC
Q 013006 281 VKGVTLLNAT 290 (451)
Q Consensus 281 v~~lvl~~~~ 290 (451)
+++++++++.
T Consensus 163 ~~~~~~~~~~ 172 (275)
T TIGR02821 163 FKSVSAFAPI 172 (275)
T ss_pred ceEEEEECCc
Confidence 9999999875
No 71
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=99.63 E-value=4.1e-14 Score=129.95 Aligned_cols=251 Identities=17% Similarity=0.214 Sum_probs=138.4
Q ss_pred eEEEEeecCCCCCCCCcEEEecCCCCChhc-HHHHH-----HhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhh
Q 013006 145 FNVHYEKAGCENVNSPPVLFLPGFGVGSFH-YEKQL-----KDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEK 218 (451)
Q Consensus 145 ~~l~y~~~g~~~~~~p~VlllHG~~~~~~~-~~~~~-----~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~ 218 (451)
-.|++...|..+.++|+||-.|-+|.+... |..++ ..+.+++.|+=+|.||+..-... -+..+
T Consensus 9 G~v~V~v~G~~~~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~~f~i~Hi~aPGqe~ga~~-~p~~y---------- 77 (283)
T PF03096_consen 9 GSVHVTVQGDPKGNKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQNFCIYHIDAPGQEEGAAT-LPEGY---------- 77 (283)
T ss_dssp EEEEEEEESS--TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHHTTSEEEEEE-TTTSTT------TT-----------
T ss_pred eEEEEEEEecCCCCCceEEEeccccccchHHHHHHhcchhHHHHhhceEEEEEeCCCCCCCccc-ccccc----------
Confidence 378888888766568999999999988766 66654 45677899999999999764321 11110
Q ss_pred hccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCC
Q 013006 219 NFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPN 298 (451)
Q Consensus 219 ~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~ 298 (451)
..-|++++++++..++++++++.++.+|--.|+.|..++|..||++|.++||+++.+..
T Consensus 78 ----------------~yPsmd~LAe~l~~Vl~~f~lk~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~----- 136 (283)
T PF03096_consen 78 ----------------QYPSMDQLAEMLPEVLDHFGLKSVIGFGVGAGANILARFALKHPERVLGLILVNPTCTA----- 136 (283)
T ss_dssp --------------------HHHHHCTHHHHHHHHT---EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S------
T ss_pred ----------------cccCHHHHHHHHHHHHHhCCccEEEEEeeccchhhhhhccccCccceeEEEEEecCCCC-----
Confidence 02599999999999999999999999999999999999999999999999999986420
Q ss_pred CCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHH-HHHHhhc----CCCChHHHHHHHHhhccChhHHHHH
Q 013006 299 PIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEV-LKQVYAD----HATNVDTVFTRILETTQHPAAAASF 373 (451)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (451)
..+... ...++..+.+..........++ +...+.. ...+.-+.+.+.+.....+.....|
T Consensus 137 ---~gw~Ew------------~~~K~~~~~L~~~gmt~~~~d~Ll~h~Fg~~~~~~n~Dlv~~yr~~l~~~~Np~Nl~~f 201 (283)
T PF03096_consen 137 ---AGWMEW------------FYQKLSSWLLYSYGMTSSVKDYLLWHYFGKEEEENNSDLVQTYRQHLDERINPKNLALF 201 (283)
T ss_dssp -----HHHH------------HHHHHH-------CTTS-HHHHHHHHHS-HHHHHCT-HHHHHHHHHHHT-TTHHHHHHH
T ss_pred ---ccHHHH------------HHHHHhcccccccccccchHHhhhhcccccccccccHHHHHHHHHHHhcCCCHHHHHHH
Confidence 000000 0111111111111111112121 1222211 1111223333333333333333333
Q ss_pred HHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCC--CCcEEEeCCCCCCccccChHHHHhhh
Q 013006 374 ASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVP--EAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp--~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
...+.. ..+.........||+|++.|++.+.+. .+.++..++. ...+..++++|=.++.|+|+.+++.+
T Consensus 202 ~~sy~~------R~DL~~~~~~~~c~vLlvvG~~Sp~~~--~vv~~ns~Ldp~~ttllkv~dcGglV~eEqP~klaea~ 272 (283)
T PF03096_consen 202 LNSYNS------RTDLSIERPSLGCPVLLVVGDNSPHVD--DVVEMNSKLDPTKTTLLKVADCGGLVLEEQPGKLAEAF 272 (283)
T ss_dssp HHHHHT-----------SECTTCCS-EEEEEETTSTTHH--HHHHHHHHS-CCCEEEEEETT-TT-HHHH-HHHHHHHH
T ss_pred HHHHhc------cccchhhcCCCCCCeEEEEecCCcchh--hHHHHHhhcCcccceEEEecccCCcccccCcHHHHHHH
Confidence 222211 134444456677999999999987664 4456666663 35788999999999999999999875
No 72
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=99.63 E-value=1.1e-13 Score=125.08 Aligned_cols=253 Identities=16% Similarity=0.235 Sum_probs=160.3
Q ss_pred eEEEEeecCCCCCCCCcEEEecCCCCChhc-HHHHH-----HhhcCCceEEEEcCCCCCCCCCC-CCCCCCCCCCCchhh
Q 013006 145 FNVHYEKAGCENVNSPPVLFLPGFGVGSFH-YEKQL-----KDLGKDYRAWAIDFLGQGMSLPD-EDPTPRSKEGDSTEE 217 (451)
Q Consensus 145 ~~l~y~~~g~~~~~~p~VlllHG~~~~~~~-~~~~~-----~~L~~~~~Vi~~D~rG~G~S~~~-~~~~~~~~~~~~~~~ 217 (451)
-.+++...|.++.++|.+|-.|.++.+... |..++ ..+..++.|+-+|.|||-.-.+. +...+
T Consensus 32 G~v~V~V~Gd~~~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~fcv~HV~~PGqe~gAp~~p~~y~---------- 101 (326)
T KOG2931|consen 32 GVVHVTVYGDPKGNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEHFCVYHVDAPGQEDGAPSFPEGYP---------- 101 (326)
T ss_pred ccEEEEEecCCCCCCceEEEecccccchHhHhHHhhcCHhHHHHHhheEEEecCCCccccCCccCCCCCC----------
Confidence 467788888776668888889999988766 65554 44556799999999998654221 11111
Q ss_pred hhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCC
Q 013006 218 KNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSP 297 (451)
Q Consensus 218 ~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~ 297 (451)
.-|++++++++..++++++.+.++-+|.-.|+.|..++|..||++|.++||+++.+.-
T Consensus 102 ------------------yPsmd~LAd~l~~VL~~f~lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a---- 159 (326)
T KOG2931|consen 102 ------------------YPSMDDLADMLPEVLDHFGLKSVIGMGVGAGAYILARFALNHPERVLGLVLINCDPCA---- 159 (326)
T ss_pred ------------------CCCHHHHHHHHHHHHHhcCcceEEEecccccHHHHHHHHhcChhheeEEEEEecCCCC----
Confidence 1599999999999999999999999999999999999999999999999999986420
Q ss_pred CCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHH-HHHHhhcCCCC----hHHHHHHHHhhccChhHHHH
Q 013006 298 NPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEV-LKQVYADHATN----VDTVFTRILETTQHPAAAAS 372 (451)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 372 (451)
. .+.. ....++...++.....-..+.++ +...|...... .-+.+.+.+.....+.....
T Consensus 160 ----~----gwie--------w~~~K~~s~~l~~~Gmt~~~~d~ll~H~Fg~e~~~~~~diVq~Yr~~l~~~~N~~Nl~~ 223 (326)
T KOG2931|consen 160 ----K----GWIE--------WAYNKVSSNLLYYYGMTQGVKDYLLAHHFGKEELGNNSDIVQEYRQHLGERLNPKNLAL 223 (326)
T ss_pred ----c----hHHH--------HHHHHHHHHHHHhhchhhhHHHHHHHHHhccccccccHHHHHHHHHHHHhcCChhHHHH
Confidence 0 0011 11122222222222222222222 22333322221 12334444444444333333
Q ss_pred HHHHHhcCCCCCchhHHhhhcc-CCCCCEEEEeeCCCCCCChHHHHHHHHHCC--CCcEEEeCCCCCCccccChHHHHhh
Q 013006 373 FASIMFAPQGNLSFREALSRCQ-MNGVPICLIYGKEDPWVKPVWGLQVKRQVP--EAPYYEISPAGHCPHDEVPEVCSLC 449 (451)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~l~-~i~~PvLii~G~~D~~v~~~~~~~l~~~lp--~~~~~~i~~~gH~~~~e~p~~v~~~ 449 (451)
|...+ ....+.......+. .++||+|++.|++.+.+. ...++...+. +..+..+.++|-.++.++|..+++.
T Consensus 224 fl~ay---n~R~DL~~~r~~~~~tlkc~vllvvGd~Sp~~~--~vv~~n~~Ldp~~ttllk~~d~g~l~~e~qP~kl~ea 298 (326)
T KOG2931|consen 224 FLNAY---NGRRDLSIERPKLGTTLKCPVLLVVGDNSPHVS--AVVECNSKLDPTYTTLLKMADCGGLVQEEQPGKLAEA 298 (326)
T ss_pred HHHHh---cCCCCccccCCCcCccccccEEEEecCCCchhh--hhhhhhcccCcccceEEEEcccCCcccccCchHHHHH
Confidence 33222 22222211111111 567999999999987764 3444555443 4678889999999999999999876
Q ss_pred h
Q 013006 450 L 450 (451)
Q Consensus 450 I 450 (451)
+
T Consensus 299 ~ 299 (326)
T KOG2931|consen 299 F 299 (326)
T ss_pred H
Confidence 5
No 73
>PLN02442 S-formylglutathione hydrolase
Probab=99.62 E-value=3.8e-14 Score=134.63 Aligned_cols=133 Identities=16% Similarity=0.237 Sum_probs=87.0
Q ss_pred CCeEEEEeecCCC---CCCCCcEEEecCCCCChhcHHHH---HHhhc-CCceEEEEcCCCCCCCCCCCCCCCCCCCCCch
Q 013006 143 PKFNVHYEKAGCE---NVNSPPVLFLPGFGVGSFHYEKQ---LKDLG-KDYRAWAIDFLGQGMSLPDEDPTPRSKEGDST 215 (451)
Q Consensus 143 ~g~~l~y~~~g~~---~~~~p~VlllHG~~~~~~~~~~~---~~~L~-~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~ 215 (451)
-|..+.|..+-|+ +...|+|+|+||++++...|... ...++ .++.|+.+|..++|.-...
T Consensus 28 l~~~~~~~vy~P~~~~~~~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~------------- 94 (283)
T PLN02442 28 LGCSMTFSVYFPPASDSGKVPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEG------------- 94 (283)
T ss_pred cCCceEEEEEcCCcccCCCCCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCC-------------
Confidence 3556666555332 23468999999999888777443 23444 3799999999887732111
Q ss_pred hhhhccccCCCC--------CCccc--cccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEE
Q 013006 216 EEKNFLWGFGDK--------AQPWA--SELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVT 285 (451)
Q Consensus 216 ~~~~~~w~~~~~--------~~~~~--~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lv 285 (451)
....|.++.. ...|. +...+-.+++.+.+..+.+.++.++++|+||||||..++.++.++|+++++++
T Consensus 95 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~ 172 (283)
T PLN02442 95 --EADSWDFGVGAGFYLNATQEKWKNWRMYDYVVKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVS 172 (283)
T ss_pred --CccccccCCCcceeeccccCCCcccchhhhHHHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCchhEEEEE
Confidence 1111211100 00000 01123455666666666666778899999999999999999999999999999
Q ss_pred EeccC
Q 013006 286 LLNAT 290 (451)
Q Consensus 286 l~~~~ 290 (451)
.+++.
T Consensus 173 ~~~~~ 177 (283)
T PLN02442 173 AFAPI 177 (283)
T ss_pred EECCc
Confidence 99975
No 74
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.60 E-value=2.3e-14 Score=123.56 Aligned_cols=204 Identities=20% Similarity=0.191 Sum_probs=125.9
Q ss_pred CCCcEEEecCCCCChh--cHHHHHHhhcC-CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccc
Q 013006 158 NSPPVLFLPGFGVGSF--HYEKQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASE 234 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~--~~~~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 234 (451)
+...+|++||+-.+.. ....++..|.+ ++.++.+|++|.|.|+..-.+ |
T Consensus 32 s~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~-----------------G----------- 83 (269)
T KOG4667|consen 32 STEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFYY-----------------G----------- 83 (269)
T ss_pred CceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCcccc-----------------C-----------
Confidence 4568999999976643 34556677765 799999999999999643221 1
Q ss_pred cccCHHHHHHHHHHHHHHhCCC-C--EEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCchHHhhhcCC
Q 013006 235 LAYSVDLWQDQVCYFIKEVIRE-P--VYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPW 311 (451)
Q Consensus 235 ~~~s~~~~a~dv~~ll~~l~~~-~--v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (451)
.....++|+..+++++... + -+++|||-||-+++.+|.++++ ++-+|-++.--.
T Consensus 84 ---n~~~eadDL~sV~q~~s~~nr~v~vi~gHSkGg~Vvl~ya~K~~d-~~~viNcsGRyd------------------- 140 (269)
T KOG4667|consen 84 ---NYNTEADDLHSVIQYFSNSNRVVPVILGHSKGGDVVLLYASKYHD-IRNVINCSGRYD------------------- 140 (269)
T ss_pred ---cccchHHHHHHHHHHhccCceEEEEEEeecCccHHHHHHHHhhcC-chheEEcccccc-------------------
Confidence 2233459999999998543 2 3589999999999999999987 777777775311
Q ss_pred CCCCCChHHH-HHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCCCCCchhHHh
Q 013006 312 SGTFPLPASV-RKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSFREAL 390 (451)
Q Consensus 312 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (451)
+...+ .++.+ ..+.....+-+-+........-.+ ..-...+... . .+.-
T Consensus 141 -----l~~~I~eRlg~---------~~l~~ike~Gfid~~~rkG~y~~r-----------vt~eSlmdrL--n---td~h 190 (269)
T KOG4667|consen 141 -----LKNGINERLGE---------DYLERIKEQGFIDVGPRKGKYGYR-----------VTEESLMDRL--N---TDIH 190 (269)
T ss_pred -----hhcchhhhhcc---------cHHHHHHhCCceecCcccCCcCce-----------ecHHHHHHHH--h---chhh
Confidence 11111 01111 111111111111111100000000 0000000000 0 1112
Q ss_pred hhccC--CCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccC
Q 013006 391 SRCQM--NGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEV 442 (451)
Q Consensus 391 ~~l~~--i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~ 442 (451)
+.+.+ .+||||-+||..|.+||.+.+.++++.+|+-++.++||+.|..-..+
T Consensus 191 ~aclkId~~C~VLTvhGs~D~IVPve~AkefAk~i~nH~L~iIEgADHnyt~~q 244 (269)
T KOG4667|consen 191 EACLKIDKQCRVLTVHGSEDEIVPVEDAKEFAKIIPNHKLEIIEGADHNYTGHQ 244 (269)
T ss_pred hhhcCcCccCceEEEeccCCceeechhHHHHHHhccCCceEEecCCCcCccchh
Confidence 22222 48999999999999999999999999999999999999999865443
No 75
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.58 E-value=4.6e-14 Score=130.49 Aligned_cols=52 Identities=19% Similarity=0.209 Sum_probs=44.8
Q ss_pred hhhccCCCCCEEEEeeCCCCCCChHHHHHHHH-HCCCCcEEEeCCCCCCcccc
Q 013006 390 LSRCQMNGVPICLIYGKEDPWVKPVWGLQVKR-QVPEAPYYEISPAGHCPHDE 441 (451)
Q Consensus 390 ~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~-~lp~~~~~~i~~~gH~~~~e 441 (451)
...+.+|.+|+|||+..+|++++++..-.... ..|++.+.+.+.+||.-++.
T Consensus 267 ~~~L~~Ir~PtLii~A~DDP~~~~~~iP~~~~~~np~v~l~~t~~GGHvGfl~ 319 (345)
T COG0429 267 LPLLPKIRKPTLIINAKDDPFMPPEVIPKLQEMLNPNVLLQLTEHGGHVGFLG 319 (345)
T ss_pred cccccccccceEEEecCCCCCCChhhCCcchhcCCCceEEEeecCCceEEecc
Confidence 44678999999999999999999987766665 67888999999999998877
No 76
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.58 E-value=6.5e-14 Score=124.58 Aligned_cols=219 Identities=12% Similarity=0.097 Sum_probs=141.0
Q ss_pred CCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCcccccccc
Q 013006 158 NSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAY 237 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 237 (451)
.++.++++|-.|+++..|+.+...|.....++++.+||+|..-..+. ..
T Consensus 6 ~~~~L~cfP~AGGsa~~fr~W~~~lp~~iel~avqlPGR~~r~~ep~-------------------------------~~ 54 (244)
T COG3208 6 ARLRLFCFPHAGGSASLFRSWSRRLPADIELLAVQLPGRGDRFGEPL-------------------------------LT 54 (244)
T ss_pred CCceEEEecCCCCCHHHHHHHHhhCCchhheeeecCCCcccccCCcc-------------------------------cc
Confidence 45789999999999999999999998889999999999997643221 26
Q ss_pred CHHHHHHHHHHHHH-HhCCCCEEEEEeCcchHHHHHHHHhCC---CccceEEEeccCCCCCCCCCCCCchHHhhhcCCCC
Q 013006 238 SVDLWQDQVCYFIK-EVIREPVYVVGNSLGGFVAVYFAACNP---HLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSG 313 (451)
Q Consensus 238 s~~~~a~dv~~ll~-~l~~~~v~lvGhS~GG~val~~A~~~P---~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (451)
+++.+++.+..-+. -+.-+++.++||||||++|.++|.+.. ..+.++.+.+..++ .... .
T Consensus 55 di~~Lad~la~el~~~~~d~P~alfGHSmGa~lAfEvArrl~~~g~~p~~lfisg~~aP-~~~~----~----------- 118 (244)
T COG3208 55 DIESLADELANELLPPLLDAPFALFGHSMGAMLAFEVARRLERAGLPPRALFISGCRAP-HYDR----G----------- 118 (244)
T ss_pred cHHHHHHHHHHHhccccCCCCeeecccchhHHHHHHHHHHHHHcCCCcceEEEecCCCC-CCcc----c-----------
Confidence 89999999988877 355578999999999999999998742 23677777776542 0000 0
Q ss_pred CCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCCCCCchhHHhhhc
Q 013006 314 TFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSFREALSRC 393 (451)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 393 (451)
.......-..+.+.+...-..+..+. ..++.++-++... +.+ ......+ .+.. -
T Consensus 119 ~~i~~~~D~~~l~~l~~lgG~p~e~l------------ed~El~~l~LPil-RAD-~~~~e~Y--------~~~~----~ 172 (244)
T COG3208 119 KQIHHLDDADFLADLVDLGGTPPELL------------EDPELMALFLPIL-RAD-FRALESY--------RYPP----P 172 (244)
T ss_pred CCccCCCHHHHHHHHHHhCCCChHHh------------cCHHHHHHHHHHH-HHH-HHHhccc--------ccCC----C
Confidence 00000111111111111111111110 0011111111111 000 0000111 1111 1
Q ss_pred cCCCCCEEEEeeCCCCCCChHHHHHHHHHCC-CCcEEEeCCCCCCccccChHHHHhhh
Q 013006 394 QMNGVPICLIYGKEDPWVKPVWGLQVKRQVP-EAPYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 394 ~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp-~~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
..++||+.++.|++|..+..+....+.++.. ..++.+++ +||+...++.+++...|
T Consensus 173 ~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~~~f~l~~fd-GgHFfl~~~~~~v~~~i 229 (244)
T COG3208 173 APLACPIHAFGGEKDHEVSRDELGAWREHTKGDFTLRVFD-GGHFFLNQQREEVLARL 229 (244)
T ss_pred CCcCcceEEeccCcchhccHHHHHHHHHhhcCCceEEEec-CcceehhhhHHHHHHHH
Confidence 3579999999999999999999998988887 57899996 59999999999888765
No 77
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.55 E-value=5.3e-13 Score=133.85 Aligned_cols=257 Identities=11% Similarity=0.071 Sum_probs=144.0
Q ss_pred CCeEEEEeecCCCCCCCCcEEEecCCCCChhcH-----HHHHHhh-cCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchh
Q 013006 143 PKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHY-----EKQLKDL-GKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTE 216 (451)
Q Consensus 143 ~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~-----~~~~~~L-~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~ 216 (451)
+..+|..+..-.+...++|||+++.+-.....| +.+++.| .+|++|+++|+++-+...+.
T Consensus 199 ~l~eLiqY~P~te~v~~~PLLIVPp~INK~YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~r~-------------- 264 (560)
T TIGR01839 199 EVLELIQYKPITEQQHARPLLVVPPQINKFYIFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAHRE-------------- 264 (560)
T ss_pred CceEEEEeCCCCCCcCCCcEEEechhhhhhheeecCCcchHHHHHHHcCCeEEEEeCCCCChhhcC--------------
Confidence 344554443222234568999999998777777 4678887 66899999999986655321
Q ss_pred hhhccccCCCCCCccccccccCHHHHHHHHHHHHHHh----CCCCEEEEEeCcchHHHHH----HHHhCCC-ccceEEEe
Q 013006 217 EKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEV----IREPVYVVGNSLGGFVAVY----FAACNPH-LVKGVTLL 287 (451)
Q Consensus 217 ~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l----~~~~v~lvGhS~GG~val~----~A~~~P~-~v~~lvl~ 287 (451)
.+++++++.+.+.++.+ +.++++++|+||||.+++. +++++++ +|++++++
T Consensus 265 --------------------~~ldDYv~~i~~Ald~V~~~tG~~~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltll 324 (560)
T TIGR01839 265 --------------------WGLSTYVDALKEAVDAVRAITGSRDLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYL 324 (560)
T ss_pred --------------------CCHHHHHHHHHHHHHHHHHhcCCCCeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEee
Confidence 57777777666666555 6789999999999999987 8888886 89999999
Q ss_pred ccCCCCCCCCCC---CCchHH---hhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhh-cCCCChHHHHHHH
Q 013006 288 NATPFWGFSPNP---IRSPKL---ARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYA-DHATNVDTVFTRI 360 (451)
Q Consensus 288 ~~~~~~~~~~~~---~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 360 (451)
.+...+...... ...... .......+..+- ..+ ...+..+.....+..++...+. .+...... +..+
T Consensus 325 atplDf~~~g~l~~f~~e~~~~~~e~~~~~~G~lpg-~~m----a~~F~~LrP~dliw~y~v~~yllg~~p~~fd-ll~W 398 (560)
T TIGR01839 325 VSLLDSTMESPAALFADEQTLEAAKRRSYQAGVLDG-SEM----AKVFAWMRPNDLIWNYWVNNYLLGNEPPAFD-ILYW 398 (560)
T ss_pred ecccccCCCCcchhccChHHHHHHHHHHHhcCCcCH-HHH----HHHHHhcCchhhhHHHHHHHhhcCCCcchhh-HHHH
Confidence 875432110000 000000 111111111111 111 1111111222222222222221 11111111 1122
Q ss_pred Hhh-ccChhHH-HHHHHHHhcC---C-CCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCC-CcEEEeCC
Q 013006 361 LET-TQHPAAA-ASFASIMFAP---Q-GNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPE-APYYEISP 433 (451)
Q Consensus 361 ~~~-~~~~~~~-~~~~~~~~~~---~-~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~-~~~~~i~~ 433 (451)
... ..-+... ..+..++... . +.+......-.+++|+||++++.|++|.++|++.+..+.+.+.. .+++.. +
T Consensus 399 n~D~t~lPg~~~~e~l~ly~~N~L~~pG~l~v~G~~idL~~I~~Pvl~va~~~DHIvPw~s~~~~~~l~gs~~~fvl~-~ 477 (560)
T TIGR01839 399 NNDTTRLPAAFHGDLLDMFKSNPLTRPDALEVCGTPIDLKKVKCDSFSVAGTNDHITPWDAVYRSALLLGGKRRFVLS-N 477 (560)
T ss_pred hCcCccchHHHHHHHHHHHhcCCCCCCCCEEECCEEechhcCCCCeEEEecCcCCcCCHHHHHHHHHHcCCCeEEEec-C
Confidence 211 1112221 1122211111 1 23333344446889999999999999999999999999999875 444445 6
Q ss_pred CCCCccc
Q 013006 434 AGHCPHD 440 (451)
Q Consensus 434 ~gH~~~~ 440 (451)
+||.-=+
T Consensus 478 gGHIggi 484 (560)
T TIGR01839 478 SGHIQSI 484 (560)
T ss_pred CCccccc
Confidence 7997443
No 78
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.54 E-value=1.3e-13 Score=144.65 Aligned_cols=220 Identities=14% Similarity=0.127 Sum_probs=137.9
Q ss_pred CccceeeecCCeEEEEeecCCCCCCC----CcEEEecCCCCChhc--HHHHHHhh-cCCceEEEEcCCCCCCCCCCCCCC
Q 013006 134 ITSCFWEWKPKFNVHYEKAGCENVNS----PPVLFLPGFGVGSFH--YEKQLKDL-GKDYRAWAIDFLGQGMSLPDEDPT 206 (451)
Q Consensus 134 ~~~~~~~~~~g~~l~y~~~g~~~~~~----p~VlllHG~~~~~~~--~~~~~~~L-~~~~~Vi~~D~rG~G~S~~~~~~~ 206 (451)
.+...+...||.+|+.....|.+.+. |+||++||.+..... |...+..| .+||.|+.+|.||-+.-...-.
T Consensus 365 ~e~~~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~F~-- 442 (620)
T COG1506 365 PEPVTYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTGYGREFA-- 442 (620)
T ss_pred ceEEEEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCccHHHHH--
Confidence 34455556689999999888765442 899999999755544 55566666 5689999999997654211000
Q ss_pred CCCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCC---CCEEEEEeCcchHHHHHHHHhCCCccce
Q 013006 207 PRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIR---EPVYVVGNSLGGFVAVYFAACNPHLVKG 283 (451)
Q Consensus 207 ~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~---~~v~lvGhS~GG~val~~A~~~P~~v~~ 283 (451)
......||- ..++|+.+.+. ++++.+. +++.|.|||+||++++..+.+.| ++++
T Consensus 443 ---------~~~~~~~g~------------~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f~a 499 (620)
T COG1506 443 ---------DAIRGDWGG------------VDLEDLIAAVD-ALVKLPLVDPERIGITGGSYGGYMTLLAATKTP-RFKA 499 (620)
T ss_pred ---------HhhhhccCC------------ccHHHHHHHHH-HHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-hhhe
Confidence 011111211 57888888888 6666643 58999999999999999999988 6777
Q ss_pred EEEeccCCCCCCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhh
Q 013006 284 VTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILET 363 (451)
Q Consensus 284 lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (451)
.+...+...|.... .. ..................+ .+.+.
T Consensus 500 ~~~~~~~~~~~~~~-----------~~-----------------------~~~~~~~~~~~~~~~~~~~-~~~~~----- 539 (620)
T COG1506 500 AVAVAGGVDWLLYF-----------GE-----------------------STEGLRFDPEENGGGPPED-REKYE----- 539 (620)
T ss_pred EEeccCcchhhhhc-----------cc-----------------------cchhhcCCHHHhCCCcccC-hHHHH-----
Confidence 77766643211000 00 0000000000000000000 00000
Q ss_pred ccChhHHHHHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCC----CCcEEEeCCCCCCcc
Q 013006 364 TQHPAAAASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVP----EAPYYEISPAGHCPH 439 (451)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp----~~~~~~i~~~gH~~~ 439 (451)
.........++++|+|+|||++|..||.+.+.++.+.+. +++++++|+.+|.+-
T Consensus 540 ----------------------~~sp~~~~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~ 597 (620)
T COG1506 540 ----------------------DRSPIFYADNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFS 597 (620)
T ss_pred ----------------------hcChhhhhcccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCC
Confidence 012233346789999999999999999999888777654 468999999999877
Q ss_pred c
Q 013006 440 D 440 (451)
Q Consensus 440 ~ 440 (451)
.
T Consensus 598 ~ 598 (620)
T COG1506 598 R 598 (620)
T ss_pred C
Confidence 6
No 79
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.54 E-value=7.4e-13 Score=127.04 Aligned_cols=259 Identities=18% Similarity=0.167 Sum_probs=142.8
Q ss_pred CccceeeecCCeEEEEeecCCCC-------CCCCcEEEecCCCCCh-hcH-HHHHHhh-cCCceEEEEcCCCCCCCCCCC
Q 013006 134 ITSCFWEWKPKFNVHYEKAGCEN-------VNSPPVLFLPGFGVGS-FHY-EKQLKDL-GKDYRAWAIDFLGQGMSLPDE 203 (451)
Q Consensus 134 ~~~~~~~~~~g~~l~y~~~g~~~-------~~~p~VlllHG~~~~~-~~~-~~~~~~L-~~~~~Vi~~D~rG~G~S~~~~ 203 (451)
.+..+++.+||-.+.+-..-+++ ...|.||++||+.+++ +.| +.++..+ .+||+|++++.||+|.|.-..
T Consensus 93 y~Reii~~~DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g~~LtT 172 (409)
T KOG1838|consen 93 YTREIIKTSDGGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGGSKLTT 172 (409)
T ss_pred ceeEEEEeCCCCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCCCCccCC
Confidence 45677888888888776553222 2469999999996554 444 4444444 458999999999999986432
Q ss_pred CCCCCCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCC---Cc
Q 013006 204 DPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNP---HL 280 (451)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P---~~ 280 (451)
.. -+. ....+|+.+.+..+.+.....++..+|.||||.+.+.|..+.. ..
T Consensus 173 pr-~f~--------------------------ag~t~Dl~~~v~~i~~~~P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l 225 (409)
T KOG1838|consen 173 PR-LFT--------------------------AGWTEDLREVVNHIKKRYPQAPLFAVGFSMGGNILTNYLGEEGDNTPL 225 (409)
T ss_pred Cc-eee--------------------------cCCHHHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHhhhccCCCCc
Confidence 21 111 1244555555555555556678999999999999999988753 35
Q ss_pred cceEEEeccCCCCCCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHH
Q 013006 281 VKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRI 360 (451)
Q Consensus 281 v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (451)
+.++++++|--. . .......+. ........+...-... +...-+..+..+..+ +...
T Consensus 226 ~~a~~v~~Pwd~---~-------~~~~~~~~~---~~~~~y~~~l~~~l~~------~~~~~r~~~~~~~vd----~d~~ 282 (409)
T KOG1838|consen 226 IAAVAVCNPWDL---L-------AASRSIETP---LYRRFYNRALTLNLKR------IVLRHRHTLFEDPVD----FDVI 282 (409)
T ss_pred eeEEEEeccchh---h-------hhhhHHhcc---cchHHHHHHHHHhHHH------HHhhhhhhhhhccch----hhhh
Confidence 677777776310 0 011111110 0111111111100000 000000000011111 1111
Q ss_pred HhhccChhHHHHHHHHHhcCCCCC---chhHHhhhccCCCCCEEEEeeCCCCCCChHH-HHHHHHHCCCCcEEEeCCCCC
Q 013006 361 LETTQHPAAAASFASIMFAPQGNL---SFREALSRCQMNGVPICLIYGKEDPWVKPVW-GLQVKRQVPEAPYYEISPAGH 436 (451)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~-~~~l~~~lp~~~~~~i~~~gH 436 (451)
.+...-......+..-++...... ........+.+|++|+|+|...+|+++|+.. -....+..|++-+.+-..+||
T Consensus 283 ~~~~SvreFD~~~t~~~~gf~~~deYY~~aSs~~~v~~I~VP~L~ina~DDPv~p~~~ip~~~~~~np~v~l~~T~~GGH 362 (409)
T KOG1838|consen 283 LKSRSVREFDEALTRPMFGFKSVDEYYKKASSSNYVDKIKVPLLCINAADDPVVPEEAIPIDDIKSNPNVLLVITSHGGH 362 (409)
T ss_pred hhcCcHHHHHhhhhhhhcCCCcHHHHHhhcchhhhcccccccEEEEecCCCCCCCcccCCHHHHhcCCcEEEEEeCCCce
Confidence 111111111111222222211111 1123455678999999999999999999853 345566678888888888999
Q ss_pred CccccC
Q 013006 437 CPHDEV 442 (451)
Q Consensus 437 ~~~~e~ 442 (451)
..++|.
T Consensus 363 lgfleg 368 (409)
T KOG1838|consen 363 LGFLEG 368 (409)
T ss_pred eeeecc
Confidence 999886
No 80
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.53 E-value=8.5e-14 Score=137.22 Aligned_cols=105 Identities=18% Similarity=0.193 Sum_probs=81.9
Q ss_pred CCCCcEEEecCCCCCh--hcHHH-HHHhhc---CCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCc
Q 013006 157 VNSPPVLFLPGFGVGS--FHYEK-QLKDLG---KDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQP 230 (451)
Q Consensus 157 ~~~p~VlllHG~~~~~--~~~~~-~~~~L~---~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~ 230 (451)
+++|++|++||++.+. ..|.. +...|. .+++||++|++|+|.|..+...
T Consensus 39 ~~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~------------------------- 93 (442)
T TIGR03230 39 HETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTSA------------------------- 93 (442)
T ss_pred CCCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCcccc-------------------------
Confidence 3679999999998653 45775 455552 2699999999999988543211
Q ss_pred cccccccCHHHHHHHHHHHHHHh------CCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCC
Q 013006 231 WASELAYSVDLWQDQVCYFIKEV------IREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPF 292 (451)
Q Consensus 231 ~~~~~~~s~~~~a~dv~~ll~~l------~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~ 292 (451)
.....+++++.++++.| +.++++||||||||.+|..++.++|++|.++++++|+.+
T Consensus 94 ------~~t~~vg~~la~lI~~L~~~~gl~l~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAgP 155 (442)
T TIGR03230 94 ------AYTKLVGKDVAKFVNWMQEEFNYPWDNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAGP 155 (442)
T ss_pred ------ccHHHHHHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCCC
Confidence 23356667777777755 368999999999999999999999999999999999753
No 81
>PLN00021 chlorophyllase
Probab=99.51 E-value=2.6e-13 Score=129.88 Aligned_cols=102 Identities=15% Similarity=0.136 Sum_probs=74.3
Q ss_pred CCCcEEEecCCCCChhcHHHHHHhhcC-CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccc
Q 013006 158 NSPPVLFLPGFGVGSFHYEKQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELA 236 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~~~~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 236 (451)
..|+|||+||++.+...|..+++.|++ ||.|+++|++|++.+..... .
T Consensus 51 ~~PvVv~lHG~~~~~~~y~~l~~~Las~G~~VvapD~~g~~~~~~~~~-------------------------------i 99 (313)
T PLN00021 51 TYPVLLFLHGYLLYNSFYSQLLQHIASHGFIVVAPQLYTLAGPDGTDE-------------------------------I 99 (313)
T ss_pred CCCEEEEECCCCCCcccHHHHHHHHHhCCCEEEEecCCCcCCCCchhh-------------------------------H
Confidence 468999999999999999999999975 79999999999653211000 0
Q ss_pred cCHHHHHHHHHHHHHH-------hCCCCEEEEEeCcchHHHHHHHHhCCC-----ccceEEEeccC
Q 013006 237 YSVDLWQDQVCYFIKE-------VIREPVYVVGNSLGGFVAVYFAACNPH-----LVKGVTLLNAT 290 (451)
Q Consensus 237 ~s~~~~a~dv~~ll~~-------l~~~~v~lvGhS~GG~val~~A~~~P~-----~v~~lvl~~~~ 290 (451)
.+..++.+.+.+.++. .+.++++++||||||.+++.+|..+++ +++++|++++.
T Consensus 100 ~d~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv 165 (313)
T PLN00021 100 KDAAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPV 165 (313)
T ss_pred HHHHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeeccc
Confidence 1122223333322222 234789999999999999999999874 68999999885
No 82
>COG0400 Predicted esterase [General function prediction only]
Probab=99.49 E-value=4.6e-13 Score=119.33 Aligned_cols=183 Identities=17% Similarity=0.143 Sum_probs=127.3
Q ss_pred CCCCCCCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccc
Q 013006 153 GCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWA 232 (451)
Q Consensus 153 g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~ 232 (451)
.++++..|+||++||+|++...+.+....+..+..++.+. | ..... +..-+|...++..--.
T Consensus 12 ~~~~p~~~~iilLHG~Ggde~~~~~~~~~~~P~~~~is~r--G--~v~~~--------------g~~~~f~~~~~~~~d~ 73 (207)
T COG0400 12 KPGDPAAPLLILLHGLGGDELDLVPLPELILPNATLVSPR--G--PVAEN--------------GGPRFFRRYDEGSFDQ 73 (207)
T ss_pred CCCCCCCcEEEEEecCCCChhhhhhhhhhcCCCCeEEcCC--C--Ccccc--------------CcccceeecCCCccch
Confidence 3445677889999999999988888666666666666553 2 11111 1222222222222224
Q ss_pred cccccCHHHHHHHHHHHHHHhCC--CCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCchHHhhhcC
Q 013006 233 SELAYSVDLWQDQVCYFIKEVIR--EPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILP 310 (451)
Q Consensus 233 ~~~~~s~~~~a~dv~~ll~~l~~--~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 310 (451)
+++......+++.+..+.++.++ ++++++|+|.|+++++.+..++|+.+++++++++......
T Consensus 74 edl~~~~~~~~~~l~~~~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~--------------- 138 (207)
T COG0400 74 EDLDLETEKLAEFLEELAEEYGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEP--------------- 138 (207)
T ss_pred hhHHHHHHHHHHHHHHHHHHhCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCC---------------
Confidence 44556667777777777788777 7899999999999999999999999999999998531000
Q ss_pred CCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCCCCCchhHHh
Q 013006 311 WSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSFREAL 390 (451)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (451)
...
T Consensus 139 -----------------------------------------------------------------------------~~~ 141 (207)
T COG0400 139 -----------------------------------------------------------------------------ELL 141 (207)
T ss_pred -----------------------------------------------------------------------------ccc
Confidence 000
Q ss_pred hhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCC----CCcEEEeCCCCCCccccChHHHHh
Q 013006 391 SRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVP----EAPYYEISPAGHCPHDEVPEVCSL 448 (451)
Q Consensus 391 ~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp----~~~~~~i~~~gH~~~~e~p~~v~~ 448 (451)
. ..-..|+++++|+.|+++|...+.++.+.+. +++..+++ +||-+..+.-+.+.+
T Consensus 142 ~--~~~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~~~~~-~GH~i~~e~~~~~~~ 200 (207)
T COG0400 142 P--DLAGTPILLSHGTEDPVVPLALAEALAEYLTASGADVEVRWHE-GGHEIPPEELEAARS 200 (207)
T ss_pred c--ccCCCeEEEeccCcCCccCHHHHHHHHHHHHHcCCCEEEEEec-CCCcCCHHHHHHHHH
Confidence 0 1136899999999999999998888777653 46778887 899987766555443
No 83
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.49 E-value=9.2e-13 Score=119.87 Aligned_cols=113 Identities=18% Similarity=0.066 Sum_probs=74.4
Q ss_pred CCCcEEEecCCCCChhcHH---HHHHhhc-CCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCcccc
Q 013006 158 NSPPVLFLPGFGVGSFHYE---KQLKDLG-KDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWAS 233 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~~~---~~~~~L~-~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~ 233 (451)
+.|.||++||.+.+...|. .+...+. .++.|+++|++|++.+...- .+|.-....
T Consensus 12 ~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~----------------~~~~~~~~~----- 70 (212)
T TIGR01840 12 PRALVLALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCW----------------DWFFTHHRA----- 70 (212)
T ss_pred CCCEEEEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCC----------------CCCCccccC-----
Confidence 4689999999998877765 2333333 47999999999998653210 011110000
Q ss_pred ccccCHHHHHHHHHHHHHHhCC--CCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCC
Q 013006 234 ELAYSVDLWQDQVCYFIKEVIR--EPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATP 291 (451)
Q Consensus 234 ~~~~s~~~~a~dv~~ll~~l~~--~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~ 291 (451)
.......++.+.+..+.+...+ ++++|+|||+||.+++.++.++|+++++++.+++.+
T Consensus 71 ~~~~~~~~~~~~i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~ 130 (212)
T TIGR01840 71 RGTGEVESLHQLIDAVKANYSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLP 130 (212)
T ss_pred CCCccHHHHHHHHHHHHHhcCcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCc
Confidence 0001223333333333444444 589999999999999999999999999999998754
No 84
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=99.47 E-value=3.7e-12 Score=124.36 Aligned_cols=274 Identities=14% Similarity=0.099 Sum_probs=152.6
Q ss_pred CccceeeecCCeEEEEeecCCCC-CC-CCcEEEecCCCCChhcH-HHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCC
Q 013006 134 ITSCFWEWKPKFNVHYEKAGCEN-VN-SPPVLFLPGFGVGSFHY-EKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSK 210 (451)
Q Consensus 134 ~~~~~~~~~~g~~l~y~~~g~~~-~~-~p~VlllHG~~~~~~~~-~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~ 210 (451)
+++..+-.++-.+|.......+. .. .|+||++..+.+..... +.+++.|-.+++|+..|+..-+.......
T Consensus 75 v~e~vV~~~~~~~L~~y~~~~~~~~~~~~pvLiV~Pl~g~~~~L~RS~V~~Ll~g~dVYl~DW~~p~~vp~~~~------ 148 (406)
T TIGR01849 75 IRERVVWDKPFCRLIHFKRQGFRAELPGPAVLIVAPMSGHYATLLRSTVEALLPDHDVYITDWVNARMVPLSAG------ 148 (406)
T ss_pred eEEEEEEECCCeEEEEECCCCcccccCCCcEEEEcCCchHHHHHHHHHHHHHhCCCcEEEEeCCCCCCCchhcC------
Confidence 44444444454554444332111 11 37999999987655443 56777775599999999988775421111
Q ss_pred CCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhC-----CCccceEE
Q 013006 211 EGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACN-----PHLVKGVT 285 (451)
Q Consensus 211 ~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~-----P~~v~~lv 285 (451)
.++++++++-+.+++++++.+ ++++|+|+||..++.+++.+ |.++++++
T Consensus 149 -------------------------~f~ldDYi~~l~~~i~~~G~~-v~l~GvCqgG~~~laa~Al~a~~~~p~~~~slt 202 (406)
T TIGR01849 149 -------------------------KFDLEDYIDYLIEFIRFLGPD-IHVIAVCQPAVPVLAAVALMAENEPPAQPRSMT 202 (406)
T ss_pred -------------------------CCCHHHHHHHHHHHHHHhCCC-CcEEEEchhhHHHHHHHHHHHhcCCCCCcceEE
Confidence 279999999999999999877 99999999999988777665 67899999
Q ss_pred EeccCCCCCCCCCCCCchHH---------hhhc----CC----CCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhc
Q 013006 286 LLNATPFWGFSPNPIRSPKL---------ARIL----PW----SGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYAD 348 (451)
Q Consensus 286 l~~~~~~~~~~~~~~~~~~~---------~~~~----~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (451)
++.++..+... +.....+ .+.. .+ .++...|..+....-.............+++.++...
T Consensus 203 lm~~PID~~~~--p~~v~~~a~~~~i~~~~~~~i~~vp~~~~g~gr~v~PG~~~~~~F~~mnp~r~~~~~~~~~~~l~~g 280 (406)
T TIGR01849 203 LMGGPIDARAS--PTVVNELAREKPIEWFQHNVIMRVPFPYPGAGRLVYPGFLQLAGFISMNLDRHTKAHSDFFLHLVKG 280 (406)
T ss_pred EEecCccCCCC--CchHHHHhhcccHHHHHHHhhhccCccccCCCCcccCHHHHHHHHHHcCcchHHHHHHHHHHHHhcC
Confidence 99986543221 1111111 1100 00 1111233322222111111111111222233222211
Q ss_pred CCCChHH---HHHHHHhhccChhH-H-HHHHHHHh---cCCCCCchhHHhhhccCCC-CCEEEEeeCCCCCCChHHHHHH
Q 013006 349 HATNVDT---VFTRILETTQHPAA-A-ASFASIMF---APQGNLSFREALSRCQMNG-VPICLIYGKEDPWVKPVWGLQV 419 (451)
Q Consensus 349 ~~~~~~~---~~~~~~~~~~~~~~-~-~~~~~~~~---~~~~~~~~~~~~~~l~~i~-~PvLii~G~~D~~v~~~~~~~l 419 (451)
+...... .+..+.....-+.. . ..+...+. ...+.+......-++++|+ +|+|.|.|++|.++++...+.+
T Consensus 281 d~~~~~~~~~f~~~y~d~~dlpge~y~~~v~~vf~~n~L~~G~l~v~G~~Vdl~~I~~~pll~V~ge~D~I~p~~qt~aa 360 (406)
T TIGR01849 281 DGQEADKHRIFYDEYLAVMDMTAEFYLQTIDVVFQQFLLPQGKFIVEGKRVDPGAITRVALLTVEGENDDISGLGQTKAA 360 (406)
T ss_pred CcchHHHHHHHHHHhhhccCCcHHHHHHHHHHHHHhCCccCCcEEECCEEecHHHCcccceEEEeccCCCcCCHHHhHHH
Confidence 1111111 11111111111111 1 11112211 1223343444445678899 9999999999999999999999
Q ss_pred HHHC---CC--CcEEEeCCCCCCcccc
Q 013006 420 KRQV---PE--APYYEISPAGHCPHDE 441 (451)
Q Consensus 420 ~~~l---p~--~~~~~i~~~gH~~~~e 441 (451)
.+.+ +. .+.++.+++||+-.+-
T Consensus 361 ~~l~~~~~s~~k~~~~~~~~GH~Gvf~ 387 (406)
T TIGR01849 361 LRLCTGIPEDMKRHHLQPGVGHYGVFS 387 (406)
T ss_pred HHHhhcCChhhceEeecCCCCeEEEee
Confidence 8875 43 3466777899986654
No 85
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=99.47 E-value=1.3e-11 Score=115.78 Aligned_cols=243 Identities=19% Similarity=0.196 Sum_probs=145.0
Q ss_pred CCcEEEecCCCCChhcHHHHHHhhc----CCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccc
Q 013006 159 SPPVLFLPGFGVGSFHYEKQLKDLG----KDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASE 234 (451)
Q Consensus 159 ~p~VlllHG~~~~~~~~~~~~~~L~----~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 234 (451)
+..|||++|.++-.+.|..++..|. .++.|+++.+.||-.+....... .+.
T Consensus 2 ~~li~~IPGNPGlv~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~-------------------------~~~ 56 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFS-------------------------PNG 56 (266)
T ss_pred cEEEEEECCCCChHHHHHHHHHHHHHhCCCCCeeEEecCCCCcCCccccccc-------------------------CCC
Confidence 3579999999999999999988873 36999999999998775431100 001
Q ss_pred cccCHHHHHHHHHHHHHHhCC------CCEEEEEeCcchHHHHHHHHhCC---CccceEEEeccCCCCCCCCCCCCchHH
Q 013006 235 LAYSVDLWQDQVCYFIKEVIR------EPVYVVGNSLGGFVAVYFAACNP---HLVKGVTLLNATPFWGFSPNPIRSPKL 305 (451)
Q Consensus 235 ~~~s~~~~a~dv~~ll~~l~~------~~v~lvGhS~GG~val~~A~~~P---~~v~~lvl~~~~~~~~~~~~~~~~~~~ 305 (451)
..|+++++++...++++++.. .+++|+|||+|++++++++.+++ .+|.+++++-|+.. ..........+
T Consensus 57 ~~~sL~~QI~hk~~~i~~~~~~~~~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~--~ia~Sp~G~~l 134 (266)
T PF10230_consen 57 RLFSLQDQIEHKIDFIKELIPQKNKPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIE--DIAKSPNGRRL 134 (266)
T ss_pred CccCHHHHHHHHHHHHHHHhhhhcCCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCccc--cccCCchhHHH
Confidence 138999999988888887633 56999999999999999999999 78999999998632 11111111122
Q ss_pred hhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHH----HhcCC
Q 013006 306 ARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASI----MFAPQ 381 (451)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 381 (451)
..+..+ .+........ ...-...-|..+..++.+.+.... +............+........+ |....
T Consensus 135 ~~~~~~---~~~~~~~~~~--~~~l~~~lP~~~~~~lv~~~~~~~---~~~~~~t~~~l~~~~~v~qaL~Ma~~Em~~I~ 206 (266)
T PF10230_consen 135 TPLLFS---PPPLVWLASF--LSFLLSLLPESVLRWLVRWVMGFP---PPAVEATTKFLLSPRVVRQALYMARDEMREIR 206 (266)
T ss_pred HHHHhh---ccHHHHHHHH--HHHHHHHCCHHHHHHHHHHHcCCC---hHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcc
Confidence 221111 1111111111 111112345555555554444433 12333333333343332222111 11111
Q ss_pred CCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCC--cEEE-eCCCCCC
Q 013006 382 GNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEA--PYYE-ISPAGHC 437 (451)
Q Consensus 382 ~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~--~~~~-i~~~gH~ 437 (451)
..+..+.......-..++.+.+|.+|.|+|.+..+++.+..|+. ++.+ .++..|.
T Consensus 207 -~~d~~~~~~~~~~~~~kl~f~fg~~D~Wvp~~~~~~l~~~~~~~~~~~~v~~~~i~Ha 264 (266)
T PF10230_consen 207 -EDDNDELIKHHNENGDKLWFYFGQNDHWVPNETRDELIERYPGHEPDVVVDEEGIPHA 264 (266)
T ss_pred -CcchHHHHHHhccCCCEEEEEEeCCCCCCCHHHHHHHHHHcCCCCCeEEEecCCCCCC
Confidence 11112333333333678999999999999999999999999943 3322 2445554
No 86
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.46 E-value=1.5e-12 Score=135.22 Aligned_cols=120 Identities=12% Similarity=0.046 Sum_probs=88.9
Q ss_pred eecCCeEEEEeecCCCC-CCCCcEEEecCCCCChh---cHH-HHHHhh-cCCceEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 013006 140 EWKPKFNVHYEKAGCEN-VNSPPVLFLPGFGVGSF---HYE-KQLKDL-GKDYRAWAIDFLGQGMSLPDEDPTPRSKEGD 213 (451)
Q Consensus 140 ~~~~g~~l~y~~~g~~~-~~~p~VlllHG~~~~~~---~~~-~~~~~L-~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~ 213 (451)
+..||++|++..+.|.+ .+.|+||++||++.+.. .+. .....| .+||.|+++|+||+|.|+.....
T Consensus 2 ~~~DG~~L~~~~~~P~~~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~~-------- 73 (550)
T TIGR00976 2 PMRDGTRLAIDVYRPAGGGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFDL-------- 73 (550)
T ss_pred cCCCCCEEEEEEEecCCCCCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCceEe--------
Confidence 35689999977665532 35689999999987653 222 233444 56899999999999999743211
Q ss_pred chhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhC-----CCCEEEEEeCcchHHHHHHHHhCCCccceEEEec
Q 013006 214 STEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVI-----REPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLN 288 (451)
Q Consensus 214 ~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~-----~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~ 288 (451)
++ ...++|+.++++.+. ..++.++|||+||.+++.+|..+|++++++|..+
T Consensus 74 -----------------------~~-~~~~~D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~ 129 (550)
T TIGR00976 74 -----------------------LG-SDEAADGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQE 129 (550)
T ss_pred -----------------------cC-cccchHHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCCceeEEeecC
Confidence 12 345667777776653 2589999999999999999999999999999988
Q ss_pred cCC
Q 013006 289 ATP 291 (451)
Q Consensus 289 ~~~ 291 (451)
+..
T Consensus 130 ~~~ 132 (550)
T TIGR00976 130 GVW 132 (550)
T ss_pred ccc
Confidence 753
No 87
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.43 E-value=1.3e-12 Score=119.17 Aligned_cols=186 Identities=18% Similarity=0.184 Sum_probs=102.8
Q ss_pred CCCCCcEEEecCCCCChhcHHHHHHh-h-cCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhh--hccccCCCCCCcc
Q 013006 156 NVNSPPVLFLPGFGVGSFHYEKQLKD-L-GKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEK--NFLWGFGDKAQPW 231 (451)
Q Consensus 156 ~~~~p~VlllHG~~~~~~~~~~~~~~-L-~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~--~~~w~~~~~~~~~ 231 (451)
.+..++|||+||+|.+...|..+... + ..+.+++.++-|-.-... .. +. ..||.........
T Consensus 11 ~~~~~lvi~LHG~G~~~~~~~~~~~~~~~~~~~~~i~p~ap~~~~~~--~~------------g~~~~~Wf~~~~~~~~~ 76 (216)
T PF02230_consen 11 GKAKPLVILLHGYGDSEDLFALLAELNLALPNTRFISPRAPSRPVTV--PG------------GYRMPAWFDIYDFDPEG 76 (216)
T ss_dssp ST-SEEEEEE--TTS-HHHHHHHHHHHTCSTTEEEEEE---EEE-GG--GT------------T-EEE-SS-BSCSSSSS
T ss_pred CCCceEEEEECCCCCCcchhHHHHhhcccCCceEEEeccCCCCCccc--cc------------ccCCCceeeccCCCcch
Confidence 34678999999999999777766652 2 235778877655310000 00 00 0111111111000
Q ss_pred ccccccCHHHHHHHHHHHHHHh-----CCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCchHHh
Q 013006 232 ASELAYSVDLWQDQVCYFIKEV-----IREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLA 306 (451)
Q Consensus 232 ~~~~~~s~~~~a~dv~~ll~~l-----~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~ 306 (451)
..-.-.++..++.+.++++.. ..++++|.|+|.||++++.++.++|+.+.++|.+++....
T Consensus 77 -~~~~~~i~~s~~~l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~------------- 142 (216)
T PF02230_consen 77 -PEDEAGIEESAERLDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPP------------- 142 (216)
T ss_dssp -EB-HHHHHHHHHHHHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TT-------------
T ss_pred -hhhHHHHHHHHHHHHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeeccccc-------------
Confidence 000123344444555555542 3368999999999999999999999999999999974210
Q ss_pred hhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCCCCCch
Q 013006 307 RILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSF 386 (451)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (451)
.. . .
T Consensus 143 -----------------------------------------~~---------------------------------~--~ 146 (216)
T PF02230_consen 143 -----------------------------------------ES---------------------------------E--L 146 (216)
T ss_dssp -----------------------------------------GC---------------------------------C--C
T ss_pred -----------------------------------------cc---------------------------------c--c
Confidence 00 0 0
Q ss_pred hHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCC----CCcEEEeCCCCCCccccChHHHH
Q 013006 387 REALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVP----EAPYYEISPAGHCPHDEVPEVCS 447 (451)
Q Consensus 387 ~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp----~~~~~~i~~~gH~~~~e~p~~v~ 447 (451)
.+..... -++|++++||++|+++|.+.++...+.+. +++++.+++.||.+..+.-+.+.
T Consensus 147 ~~~~~~~--~~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~i~~~~~~~~~ 209 (216)
T PF02230_consen 147 EDRPEAL--AKTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHEISPEELRDLR 209 (216)
T ss_dssp HCCHCCC--CTS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS--HHHHHHHH
T ss_pred ccccccc--CCCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCCCCHHHHHHHH
Confidence 0001111 17899999999999999988877766653 46789999999988754444433
No 88
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.43 E-value=2.5e-12 Score=112.37 Aligned_cols=254 Identities=18% Similarity=0.254 Sum_probs=140.2
Q ss_pred CCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcC-CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhcc
Q 013006 143 PKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFL 221 (451)
Q Consensus 143 ~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~ 221 (451)
||..+....+...++....|++-.+++.....|+.++..+++ +|.|+.+|+||.|+|.+.... ...
T Consensus 14 DG~~l~~~~~pA~~~~~g~~~va~a~Gv~~~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~-------------~~~ 80 (281)
T COG4757 14 DGYSLPGQRFPADGKASGRLVVAGATGVGQYFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLS-------------GSQ 80 (281)
T ss_pred CCccCccccccCCCCCCCcEEecccCCcchhHhHHHHHHhhccCceEEEEecccccCCCccccc-------------cCc
Confidence 444444444433333334677777788888889999999855 899999999999999764321 112
Q ss_pred ccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCC
Q 013006 222 WGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIR 301 (451)
Q Consensus 222 w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~ 301 (451)
|+|.| ....|+...|..+-+.+...+.+.||||+||.+.- ++.++| ++.+....+..+.|.-. ...
T Consensus 81 ~~~~D----------wA~~D~~aal~~~~~~~~~~P~y~vgHS~GGqa~g-L~~~~~-k~~a~~vfG~gagwsg~--m~~ 146 (281)
T COG4757 81 WRYLD----------WARLDFPAALAALKKALPGHPLYFVGHSFGGQALG-LLGQHP-KYAAFAVFGSGAGWSGW--MGL 146 (281)
T ss_pred cchhh----------hhhcchHHHHHHHHhhCCCCceEEeeccccceeec-ccccCc-ccceeeEeccccccccc--hhh
Confidence 32221 22333344444444455667899999999998644 445566 67777777765532110 000
Q ss_pred chHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHH-HHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcC
Q 013006 302 SPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVL-KQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAP 380 (451)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (451)
...+....-|.-..+.-.. ....+ +.++...+...-..+..+....+.+... +.
T Consensus 147 ~~~l~~~~l~~lv~p~lt~-----------------w~g~~p~~l~G~G~d~p~~v~RdW~RwcR~p~y~-------fd- 201 (281)
T COG4757 147 RERLGAVLLWNLVGPPLTF-----------------WKGYMPKDLLGLGSDLPGTVMRDWARWCRHPRYY-------FD- 201 (281)
T ss_pred hhcccceeeccccccchhh-----------------ccccCcHhhcCCCccCcchHHHHHHHHhcCcccc-------cc-
Confidence 0000000001000000000 00111 1112222222223333333333332110 00
Q ss_pred CCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEE--EeCC----CCCCccccCh-HHHHhhh
Q 013006 381 QGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYY--EISP----AGHCPHDEVP-EVCSLCL 450 (451)
Q Consensus 381 ~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~--~i~~----~gH~~~~e~p-~~v~~~I 450 (451)
.-......+..+.+.+|++++...+|+++|+...+.+.+..+++.+. .++. -||+-..-+| |.+.+++
T Consensus 202 --dp~~~~~~q~yaaVrtPi~~~~~~DD~w~P~As~d~f~~~y~nApl~~~~~~~~~~~lGH~gyfR~~~Ealwk~~ 276 (281)
T COG4757 202 --DPAMRNYRQVYAAVRTPITFSRALDDPWAPPASRDAFASFYRNAPLEMRDLPRAEGPLGHMGYFREPFEALWKEM 276 (281)
T ss_pred --ChhHhHHHHHHHHhcCceeeeccCCCCcCCHHHHHHHHHhhhcCcccceecCcccCcccchhhhccchHHHHHHH
Confidence 00112233445678999999999999999999999999999987544 4443 4999888887 6665554
No 89
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.43 E-value=7.8e-13 Score=120.44 Aligned_cols=178 Identities=19% Similarity=0.219 Sum_probs=101.9
Q ss_pred HHHHHHhh-cCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHh
Q 013006 175 YEKQLKDL-GKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEV 253 (451)
Q Consensus 175 ~~~~~~~L-~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l 253 (451)
|......| .+||.|+.+|+||.+.....-.. .....| ....++|..+.+..+++.-
T Consensus 3 f~~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~-----------~~~~~~------------~~~~~~D~~~~i~~l~~~~ 59 (213)
T PF00326_consen 3 FNWNAQLLASQGYAVLVPNYRGSGGYGKDFHE-----------AGRGDW------------GQADVDDVVAAIEYLIKQY 59 (213)
T ss_dssp -SHHHHHHHTTT-EEEEEE-TTSSSSHHHHHH-----------TTTTGT------------THHHHHHHHHHHHHHHHTT
T ss_pred eeHHHHHHHhCCEEEEEEcCCCCCccchhHHH-----------hhhccc------------cccchhhHHHHHHHHhccc
Confidence 34556677 56899999999998754211000 000000 0134555555555555543
Q ss_pred --CCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHh
Q 013006 254 --IREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQK 331 (451)
Q Consensus 254 --~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (451)
..+++.++|+|+||.+++.++.++|+++++++..++...+.... ..
T Consensus 60 ~iD~~ri~i~G~S~GG~~a~~~~~~~~~~f~a~v~~~g~~d~~~~~---------------------~~----------- 107 (213)
T PF00326_consen 60 YIDPDRIGIMGHSYGGYLALLAATQHPDRFKAAVAGAGVSDLFSYY---------------------GT----------- 107 (213)
T ss_dssp SEEEEEEEEEEETHHHHHHHHHHHHTCCGSSEEEEESE-SSTTCSB---------------------HH-----------
T ss_pred cccceeEEEEcccccccccchhhcccceeeeeeeccceecchhccc---------------------cc-----------
Confidence 34789999999999999999999999999999999853211000 00
Q ss_pred cCChHHHHH-HHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCCCCCchhHHhhhccC--CCCCEEEEeeCCC
Q 013006 332 ISDPESIAE-VLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSFREALSRCQM--NGVPICLIYGKED 408 (451)
Q Consensus 332 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--i~~PvLii~G~~D 408 (451)
... ... .... +.... .....+.. ......+.+ +++|+|+++|++|
T Consensus 108 -~~~--~~~~~~~~-~~~~~-~~~~~~~~---------------------------~s~~~~~~~~~~~~P~li~hG~~D 155 (213)
T PF00326_consen 108 -TDI--YTKAEYLE-YGDPW-DNPEFYRE---------------------------LSPISPADNVQIKPPVLIIHGEND 155 (213)
T ss_dssp -TCC--HHHGHHHH-HSSTT-TSHHHHHH---------------------------HHHGGGGGGCGGGSEEEEEEETTB
T ss_pred -ccc--cccccccc-cCccc-hhhhhhhh---------------------------hccccccccccCCCCEEEEccCCC
Confidence 000 000 0000 00000 01111111 111222233 6899999999999
Q ss_pred CCCChHHHHHHHHHCC----CCcEEEeCCCCCCcc
Q 013006 409 PWVKPVWGLQVKRQVP----EAPYYEISPAGHCPH 439 (451)
Q Consensus 409 ~~v~~~~~~~l~~~lp----~~~~~~i~~~gH~~~ 439 (451)
..||+..+.++.+.+. .++++++|++||.+.
T Consensus 156 ~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~ 190 (213)
T PF00326_consen 156 PRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFG 190 (213)
T ss_dssp SSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTT
T ss_pred CccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCC
Confidence 9999998887766653 378999999999544
No 90
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.43 E-value=1.1e-11 Score=118.77 Aligned_cols=244 Identities=20% Similarity=0.153 Sum_probs=129.5
Q ss_pred CccceeeecCCeEEEEeecCCC--CCCCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCC
Q 013006 134 ITSCFWEWKPKFNVHYEKAGCE--NVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKE 211 (451)
Q Consensus 134 ~~~~~~~~~~g~~l~y~~~g~~--~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~ 211 (451)
+-.-.++..+|..|+-...-|. +.+-|.||.+||.++....|...+.....|+-|+.+|.||+|.............
T Consensus 56 vy~v~f~s~~g~~V~g~l~~P~~~~~~~Pavv~~hGyg~~~~~~~~~~~~a~~G~~vl~~d~rGqg~~~~d~~~~~~~~- 134 (320)
T PF05448_consen 56 VYDVSFESFDGSRVYGWLYRPKNAKGKLPAVVQFHGYGGRSGDPFDLLPWAAAGYAVLAMDVRGQGGRSPDYRGSSGGT- 134 (320)
T ss_dssp EEEEEEEEGGGEEEEEEEEEES-SSSSEEEEEEE--TT--GGGHHHHHHHHHTT-EEEEE--TTTSSSS-B-SSBSSS--
T ss_pred EEEEEEEccCCCEEEEEEEecCCCCCCcCEEEEecCCCCCCCCcccccccccCCeEEEEecCCCCCCCCCCccccCCCC-
Confidence 3345555668888887766654 2345889999999999888887777667899999999999994332211100000
Q ss_pred CCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHh------CCCCEEEEEeCcchHHHHHHHHhCCCccceEE
Q 013006 212 GDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEV------IREPVYVVGNSLGGFVAVYFAACNPHLVKGVT 285 (451)
Q Consensus 212 ~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l------~~~~v~lvGhS~GG~val~~A~~~P~~v~~lv 285 (451)
.......|..+.. + .+-+..+..|....++.+ +.+++.+.|.|+||.+++.+|+..| +|++++
T Consensus 135 ----~~g~~~~g~~~~~----e--~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~-rv~~~~ 203 (320)
T PF05448_consen 135 ----LKGHITRGIDDNP----E--DYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP-RVKAAA 203 (320)
T ss_dssp ----SSSSTTTTTTS-T----T--T-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS-T-SEEE
T ss_pred ----CccHHhcCccCch----H--HHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc-cccEEE
Confidence 0111112222201 1 123334445555555544 2367999999999999999999986 699999
Q ss_pred EeccCCCCCCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhcc
Q 013006 286 LLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQ 365 (451)
Q Consensus 286 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (451)
...|..- ........... ...-..+..+++. ........++.++.
T Consensus 204 ~~vP~l~---------------------------d~~~~~~~~~~-~~~y~~~~~~~~~-~d~~~~~~~~v~~~------ 248 (320)
T PF05448_consen 204 ADVPFLC---------------------------DFRRALELRAD-EGPYPEIRRYFRW-RDPHHEREPEVFET------ 248 (320)
T ss_dssp EESESSS---------------------------SHHHHHHHT---STTTHHHHHHHHH-HSCTHCHHHHHHHH------
T ss_pred ecCCCcc---------------------------chhhhhhcCCc-cccHHHHHHHHhc-cCCCcccHHHHHHH------
Confidence 9887420 01111000000 0000111111110 00111111111111
Q ss_pred ChhHHHHHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCC-CcEEEeCCCCCCccccC
Q 013006 366 HPAAAASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPE-APYYEISPAGHCPHDEV 442 (451)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~-~~~~~i~~~gH~~~~e~ 442 (451)
+.+.|...-.++|+||+++-.|-.|+++||.....+.+.++. .++.++|..||....+.
T Consensus 249 ------------------L~Y~D~~nfA~ri~~pvl~~~gl~D~~cPP~t~fA~yN~i~~~K~l~vyp~~~He~~~~~ 308 (320)
T PF05448_consen 249 ------------------LSYFDAVNFARRIKCPVLFSVGLQDPVCPPSTQFAAYNAIPGPKELVVYPEYGHEYGPEF 308 (320)
T ss_dssp ------------------HHTT-HHHHGGG--SEEEEEEETT-SSS-HHHHHHHHCC--SSEEEEEETT--SSTTHHH
T ss_pred ------------------HhhhhHHHHHHHcCCCEEEEEecCCCCCCchhHHHHHhccCCCeeEEeccCcCCCchhhH
Confidence 112355555577999999999999999999999999998874 67899999999866554
No 91
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.43 E-value=5.1e-13 Score=126.05 Aligned_cols=115 Identities=17% Similarity=0.185 Sum_probs=83.6
Q ss_pred CeEEEEeecCCCCCCCCcEEEecCCCCCh-hcHHHHH-Hh-hc-CCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhh
Q 013006 144 KFNVHYEKAGCENVNSPPVLFLPGFGVGS-FHYEKQL-KD-LG-KDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKN 219 (451)
Q Consensus 144 g~~l~y~~~g~~~~~~p~VlllHG~~~~~-~~~~~~~-~~-L~-~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~ 219 (451)
+..+.+..+.+ ++|++|++||++++. ..|...+ .. |. .+++|+++|+++++.+..+.
T Consensus 24 ~~~~~~~~f~~---~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~~---------------- 84 (275)
T cd00707 24 PSSLKNSNFNP---SRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYPQ---------------- 84 (275)
T ss_pred hhhhhhcCCCC---CCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccChHH----------------
Confidence 34444444443 578999999999887 6776554 33 44 46999999999984332110
Q ss_pred ccccCCCCCCccccccccCHHHHHHHHHHHHHHh------CCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCC
Q 013006 220 FLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEV------IREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPF 292 (451)
Q Consensus 220 ~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l------~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~ 292 (451)
...+++.+.+++..+++.+ ..++++||||||||.+|..++.++|++|+++++++|+.+
T Consensus 85 ---------------a~~~~~~v~~~la~~l~~L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p 148 (275)
T cd00707 85 ---------------AVNNTRVVGAELAKFLDFLVDNTGLSLENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGP 148 (275)
T ss_pred ---------------HHHhHHHHHHHHHHHHHHHHHhcCCChHHEEEEEecHHHHHHHHHHHHhcCccceeEEecCCcc
Confidence 0135555666666666654 347899999999999999999999999999999998753
No 92
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.42 E-value=1.3e-11 Score=114.79 Aligned_cols=119 Identities=15% Similarity=0.206 Sum_probs=101.7
Q ss_pred cCCeEEEEeecCCCCC----CCCcEEEecCCCCChhcHHHHHHhhcC----------CceEEEEcCCCCCCCCCCCCCCC
Q 013006 142 KPKFNVHYEKAGCENV----NSPPVLFLPGFGVGSFHYEKQLKDLGK----------DYRAWAIDFLGQGMSLPDEDPTP 207 (451)
Q Consensus 142 ~~g~~l~y~~~g~~~~----~~p~VlllHG~~~~~~~~~~~~~~L~~----------~~~Vi~~D~rG~G~S~~~~~~~~ 207 (451)
-.|++|||....++.. .-.|||++||++++-..+..+++.|.+ .|.||++.+||+|.|+.+...-
T Consensus 131 IeGL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv~EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~sk~G- 209 (469)
T KOG2565|consen 131 IEGLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSVREFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAPSKTG- 209 (469)
T ss_pred hcceeEEEEEecCCccccCCcccceEEecCCCchHHHHHhhhhhhcCccccCCccceeEEEeccCCCCcccCcCCccCC-
Confidence 3699999998876421 125899999999999999999998843 2789999999999998766542
Q ss_pred CCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEe
Q 013006 208 RSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLL 287 (451)
Q Consensus 208 ~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~ 287 (451)
++..+.|.-++.++=.||..++.|-|-.||+.|+..+|..+|++|.|+-+-
T Consensus 210 -----------------------------Fn~~a~ArvmrkLMlRLg~nkffiqGgDwGSiI~snlasLyPenV~GlHln 260 (469)
T KOG2565|consen 210 -----------------------------FNAAATARVMRKLMLRLGYNKFFIQGGDWGSIIGSNLASLYPENVLGLHLN 260 (469)
T ss_pred -----------------------------ccHHHHHHHHHHHHHHhCcceeEeecCchHHHHHHHHHhhcchhhhHhhhc
Confidence 688889999999999999999999999999999999999999999998765
Q ss_pred ccC
Q 013006 288 NAT 290 (451)
Q Consensus 288 ~~~ 290 (451)
.+.
T Consensus 261 m~~ 263 (469)
T KOG2565|consen 261 MCF 263 (469)
T ss_pred ccc
Confidence 543
No 93
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.39 E-value=1.7e-11 Score=118.60 Aligned_cols=221 Identities=18% Similarity=0.133 Sum_probs=115.5
Q ss_pred CccceeeecCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHH-HHhh-cCCceEEEEcCCCCCCCCCCCCCCCCCCC
Q 013006 134 ITSCFWEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQ-LKDL-GKDYRAWAIDFLGQGMSLPDEDPTPRSKE 211 (451)
Q Consensus 134 ~~~~~~~~~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~-~~~L-~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~ 211 (451)
++...+.+.++.-..|....+.+...|+||++-|+-+-...+..+ .+.| .+|+.++++|.||.|.|...+-.
T Consensus 165 i~~v~iP~eg~~I~g~LhlP~~~~p~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l~------ 238 (411)
T PF06500_consen 165 IEEVEIPFEGKTIPGYLHLPSGEKPYPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPLT------ 238 (411)
T ss_dssp EEEEEEEETTCEEEEEEEESSSSS-EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S-------
T ss_pred cEEEEEeeCCcEEEEEEEcCCCCCCCCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCcccccCCCC------
Confidence 444444444432223333333333457777777777766665444 4556 57999999999999998532211
Q ss_pred CCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhC---CCCEEEEEeCcchHHHHHHHHhCCCccceEEEec
Q 013006 212 GDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVI---REPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLN 288 (451)
Q Consensus 212 ~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~---~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~ 288 (451)
.+.+.+...|.+.+.... ..+|.++|.|+||.+|.++|..+++|++++|.++
T Consensus 239 -------------------------~D~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~G 293 (411)
T PF06500_consen 239 -------------------------QDSSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALG 293 (411)
T ss_dssp -------------------------S-CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES
T ss_pred -------------------------cCHHHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceeeEeeeC
Confidence 122334455555555543 3689999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChh
Q 013006 289 ATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPA 368 (451)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (451)
+.... + +... . .....|......+...+.......+....+.....
T Consensus 294 a~vh~-~-------------------------ft~~---~-~~~~~P~my~d~LA~rlG~~~~~~~~l~~el~~~S---- 339 (411)
T PF06500_consen 294 APVHH-F-------------------------FTDP---E-WQQRVPDMYLDVLASRLGMAAVSDESLRGELNKFS---- 339 (411)
T ss_dssp ---SC-G-------------------------GH-H---H-HHTTS-HHHHHHHHHHCT-SCE-HHHHHHHGGGGS----
T ss_pred chHhh-h-------------------------hccH---H-HHhcCCHHHHHHHHHHhCCccCCHHHHHHHHHhcC----
Confidence 85310 0 0000 0 00011222233333333322222222111111110
Q ss_pred HHHHHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCC
Q 013006 369 AAASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAG 435 (451)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~g 435 (451)
+.....+. -++..+|+|.+.|++|+++|.+..+-++..-.+.+...++...
T Consensus 340 ---------------Lk~qGlL~-~rr~~~plL~i~~~~D~v~P~eD~~lia~~s~~gk~~~~~~~~ 390 (411)
T PF06500_consen 340 ---------------LKTQGLLS-GRRCPTPLLAINGEDDPVSPIEDSRLIAESSTDGKALRIPSKP 390 (411)
T ss_dssp ---------------TTTTTTTT-SS-BSS-EEEEEETT-SSS-HHHHHHHHHTBTT-EEEEE-SSS
T ss_pred ---------------cchhcccc-CCCCCcceEEeecCCCCCCCHHHHHHHHhcCCCCceeecCCCc
Confidence 00011111 1567899999999999999999999999988777888887544
No 94
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.38 E-value=7.5e-12 Score=109.00 Aligned_cols=154 Identities=21% Similarity=0.263 Sum_probs=102.5
Q ss_pred EEEecCCCCC-hhcHHHHHHh-hcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccccCH
Q 013006 162 VLFLPGFGVG-SFHYEKQLKD-LGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSV 239 (451)
Q Consensus 162 VlllHG~~~~-~~~~~~~~~~-L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~ 239 (451)
|+++||++++ ..+|....+. |...++|-.+|+ . . -+.
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~~~V~~~~~------~---~--------------------------------P~~ 39 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENSVRVEQPDW------D---N--------------------------------PDL 39 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTSEEEEEC--------T---S----------------------------------H
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCCeEEecccc------C---C--------------------------------CCH
Confidence 6899999777 5678876654 655577877776 1 1 378
Q ss_pred HHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHH-HhCCCccceEEEeccCCCCCCCCCCCCchHHhhhcCCCCCCCCh
Q 013006 240 DLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFA-ACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLP 318 (451)
Q Consensus 240 ~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A-~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (451)
++|.+.+..-+..+. +++++||||+|+..++.++ .....+|++++|+++.-.. ..........
T Consensus 40 ~~W~~~l~~~i~~~~-~~~ilVaHSLGc~~~l~~l~~~~~~~v~g~lLVAp~~~~----------~~~~~~~~~~----- 103 (171)
T PF06821_consen 40 DEWVQALDQAIDAID-EPTILVAHSLGCLTALRWLAEQSQKKVAGALLVAPFDPD----------DPEPFPPELD----- 103 (171)
T ss_dssp HHHHHHHHHCCHC-T-TTEEEEEETHHHHHHHHHHHHTCCSSEEEEEEES--SCG----------CHHCCTCGGC-----
T ss_pred HHHHHHHHHHHhhcC-CCeEEEEeCHHHHHHHHHHhhcccccccEEEEEcCCCcc----------cccchhhhcc-----
Confidence 888888887777653 5699999999999999999 7778899999999985210 0000000000
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCCCCCchhHHhhhccCCCC
Q 013006 319 ASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSFREALSRCQMNGV 398 (451)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 398 (451)
.+ .. . ......+
T Consensus 104 ----------------------------------------------------------------~f--~~-~-p~~~l~~ 115 (171)
T PF06821_consen 104 ----------------------------------------------------------------GF--TP-L-PRDPLPF 115 (171)
T ss_dssp ----------------------------------------------------------------CC--TT-S-HCCHHHC
T ss_pred ----------------------------------------------------------------cc--cc-C-cccccCC
Confidence 00 00 0 0112356
Q ss_pred CEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCcccc
Q 013006 399 PICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDE 441 (451)
Q Consensus 399 PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e 441 (451)
|.++|.+++|+++|.+.++++++.+ +++++.++++||+.-.+
T Consensus 116 ~~~viaS~nDp~vp~~~a~~~A~~l-~a~~~~~~~~GHf~~~~ 157 (171)
T PF06821_consen 116 PSIVIASDNDPYVPFERAQRLAQRL-GAELIILGGGGHFNAAS 157 (171)
T ss_dssp CEEEEEETTBSSS-HHHHHHHHHHH-T-EEEEETS-TTSSGGG
T ss_pred CeEEEEcCCCCccCHHHHHHHHHHc-CCCeEECCCCCCccccc
Confidence 7799999999999999999999999 88999999999997654
No 95
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.37 E-value=5.6e-12 Score=115.24 Aligned_cols=173 Identities=17% Similarity=0.169 Sum_probs=106.9
Q ss_pred CCCcEEEecCCCCChhcHHHHHHhhc-CCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccc
Q 013006 158 NSPPVLFLPGFGVGSFHYEKQLKDLG-KDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELA 236 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~~~~~~~~L~-~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 236 (451)
+.|.||++|++.+-....+.+++.|+ +||.|+++|+-+-..... .... .....|. ....
T Consensus 13 ~~~~Vvv~~d~~G~~~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~-~~~~----------~~~~~~~---------~~~~ 72 (218)
T PF01738_consen 13 PRPAVVVIHDIFGLNPNIRDLADRLAEEGYVVLAPDLFGGRGAPP-SDPE----------EAFAAMR---------ELFA 72 (218)
T ss_dssp SEEEEEEE-BTTBS-HHHHHHHHHHHHTT-EEEEE-CCCCTS--C-CCHH----------CHHHHHH---------HCHH
T ss_pred CCCEEEEEcCCCCCchHHHHHHHHHHhcCCCEEecccccCCCCCc-cchh----------hHHHHHH---------HHHh
Confidence 46899999998877777777888885 489999999865444111 1100 0011110 0000
Q ss_pred cCHHHHHHHHHHHHHHhC------CCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCchHHhhhcC
Q 013006 237 YSVDLWQDQVCYFIKEVI------REPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILP 310 (451)
Q Consensus 237 ~s~~~~a~dv~~ll~~l~------~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 310 (451)
-..+...+++...++.+. .+++.++|+|+||.+++.+|.+. ..+++++..-+...
T Consensus 73 ~~~~~~~~~~~aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg~~~------------------ 133 (218)
T PF01738_consen 73 PRPEQVAADLQAAVDYLRAQPEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYGGSP------------------ 133 (218)
T ss_dssp HSHHHHHHHHHHHHHHHHCTTTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-SSS------------------
T ss_pred hhHHHHHHHHHHHHHHHHhccccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcCCCC------------------
Confidence 124566677766666662 35899999999999999999887 57999988775100
Q ss_pred CCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCCCCCchhHHh
Q 013006 311 WSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSFREAL 390 (451)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (451)
.....
T Consensus 134 ---------------------------------------------------------------------------~~~~~ 138 (218)
T PF01738_consen 134 ---------------------------------------------------------------------------PPPPL 138 (218)
T ss_dssp ---------------------------------------------------------------------------GGGHH
T ss_pred ---------------------------------------------------------------------------CCcch
Confidence 01112
Q ss_pred hhccCCCCCEEEEeeCCCCCCChHHHHHHHHHC----CCCcEEEeCCCCCCccccChH
Q 013006 391 SRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQV----PEAPYYEISPAGHCPHDEVPE 444 (451)
Q Consensus 391 ~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~l----p~~~~~~i~~~gH~~~~e~p~ 444 (451)
....++++|+++++|++|+.++.+..+.+.+.+ ...++++++|++|.+......
T Consensus 139 ~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~y~ga~HgF~~~~~~ 196 (218)
T PF01738_consen 139 EDAPKIKAPVLILFGENDPFFPPEEVEALEEALKAAGVDVEVHVYPGAGHGFANPSRP 196 (218)
T ss_dssp HHGGG--S-EEEEEETT-TTS-HHHHHHHHHHHHCTTTTEEEEEETT--TTTTSTTST
T ss_pred hhhcccCCCEeecCccCCCCCChHHHHHHHHHHHhcCCcEEEEECCCCcccccCCCCc
Confidence 223457899999999999999999777666655 457899999999987765433
No 96
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.35 E-value=2.7e-11 Score=111.55 Aligned_cols=99 Identities=23% Similarity=0.373 Sum_probs=84.3
Q ss_pred CcEEEecCCCCChhcHHHHHHhhcCC-ceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccccC
Q 013006 160 PPVLFLPGFGVGSFHYEKQLKDLGKD-YRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYS 238 (451)
Q Consensus 160 p~VlllHG~~~~~~~~~~~~~~L~~~-~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s 238 (451)
++|+++|+.+++...|..+++.|... +.|+.++.+|.+..... ..+
T Consensus 1 ~~lf~~p~~gG~~~~y~~la~~l~~~~~~v~~i~~~~~~~~~~~---------------------------------~~s 47 (229)
T PF00975_consen 1 RPLFCFPPAGGSASSYRPLARALPDDVIGVYGIEYPGRGDDEPP---------------------------------PDS 47 (229)
T ss_dssp -EEEEESSTTCSGGGGHHHHHHHTTTEEEEEEECSTTSCTTSHE---------------------------------ESS
T ss_pred CeEEEEcCCccCHHHHHHHHHhCCCCeEEEEEEecCCCCCCCCC---------------------------------CCC
Confidence 47999999999999999999999997 99999999999833221 159
Q ss_pred HHHHHHHHHHHHHHhCCC-CEEEEEeCcchHHHHHHHHhC---CCccceEEEeccCC
Q 013006 239 VDLWQDQVCYFIKEVIRE-PVYVVGNSLGGFVAVYFAACN---PHLVKGVTLLNATP 291 (451)
Q Consensus 239 ~~~~a~dv~~ll~~l~~~-~v~lvGhS~GG~val~~A~~~---P~~v~~lvl~~~~~ 291 (451)
++++++...+.|.....+ +++|+|||+||.+|+++|.+. ...|..++++++.+
T Consensus 48 i~~la~~y~~~I~~~~~~gp~~L~G~S~Gg~lA~E~A~~Le~~G~~v~~l~liD~~~ 104 (229)
T PF00975_consen 48 IEELASRYAEAIRARQPEGPYVLAGWSFGGILAFEMARQLEEAGEEVSRLILIDSPP 104 (229)
T ss_dssp HHHHHHHHHHHHHHHTSSSSEEEEEETHHHHHHHHHHHHHHHTT-SESEEEEESCSS
T ss_pred HHHHHHHHHHHhhhhCCCCCeeehccCccHHHHHHHHHHHHHhhhccCceEEecCCC
Confidence 999999998888887665 999999999999999999863 45699999999754
No 97
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.35 E-value=4.2e-11 Score=125.28 Aligned_cols=131 Identities=16% Similarity=0.064 Sum_probs=91.6
Q ss_pred eeeecCCeEEEEeecCCCC-------CCCCcEEEecCCCCChhcHHHHHHhhc-CCceEEEEcCCCCCCCCCCCCCCCCC
Q 013006 138 FWEWKPKFNVHYEKAGCEN-------VNSPPVLFLPGFGVGSFHYEKQLKDLG-KDYRAWAIDFLGQGMSLPDEDPTPRS 209 (451)
Q Consensus 138 ~~~~~~g~~l~y~~~g~~~-------~~~p~VlllHG~~~~~~~~~~~~~~L~-~~~~Vi~~D~rG~G~S~~~~~~~~~~ 209 (451)
.+...++.++.|...|.+. ...|+|||+||++++...|..++..|+ ++|+|+++|+||||.|.........+
T Consensus 421 ~~~~p~~~~i~~~~~~~g~~~~~~p~~g~P~VVllHG~~g~~~~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~ 500 (792)
T TIGR03502 421 LLTTPNGPVIAAFRAGTGLETFAAPTDGWPVVIYQHGITGAKENALAFAGTLAAAGVATIAIDHPLHGARSFDANASGVN 500 (792)
T ss_pred EEEecCcchhhhhhcccccccccCCCCCCcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEeCCCCCCcccccccccccc
Confidence 5566778888888765431 123689999999999999999999996 58999999999999995431111000
Q ss_pred CCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhC----------------CCCEEEEEeCcchHHHHHH
Q 013006 210 KEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVI----------------REPVYVVGNSLGGFVAVYF 273 (451)
Q Consensus 210 ~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~----------------~~~v~lvGhS~GG~val~~ 273 (451)
-.....++|.+..... -....+++.+.|+..+...+. ..+++++||||||.++..+
T Consensus 501 ------a~~~~~~~y~Nl~~l~--~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~ 572 (792)
T TIGR03502 501 ------ATNANVLAYMNLASLL--VARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSF 572 (792)
T ss_pred ------ccccCccceecccccc--ccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHH
Confidence 0011112222210000 012478999999999988886 2489999999999999999
Q ss_pred HHh
Q 013006 274 AAC 276 (451)
Q Consensus 274 A~~ 276 (451)
+..
T Consensus 573 ~~~ 575 (792)
T TIGR03502 573 IAY 575 (792)
T ss_pred HHh
Confidence 975
No 98
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=99.30 E-value=1.1e-11 Score=93.08 Aligned_cols=78 Identities=27% Similarity=0.341 Sum_probs=66.2
Q ss_pred CeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHHHhhcC-CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccc
Q 013006 144 KFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLW 222 (451)
Q Consensus 144 g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w 222 (451)
|.+|+|+.+.|+++.+.+|+++||++..+..|..++..|++ +|.|+++|+||||.|+.....
T Consensus 1 G~~L~~~~w~p~~~~k~~v~i~HG~~eh~~ry~~~a~~L~~~G~~V~~~D~rGhG~S~g~rg~----------------- 63 (79)
T PF12146_consen 1 GTKLFYRRWKPENPPKAVVVIVHGFGEHSGRYAHLAEFLAEQGYAVFAYDHRGHGRSEGKRGH----------------- 63 (79)
T ss_pred CcEEEEEEecCCCCCCEEEEEeCCcHHHHHHHHHHHHHHHhCCCEEEEECCCcCCCCCCcccc-----------------
Confidence 67899999998766577999999999999999999999965 799999999999999743221
Q ss_pred cCCCCCCccccccccCHHHHHHHHHHHHH
Q 013006 223 GFGDKAQPWASELAYSVDLWQDQVCYFIK 251 (451)
Q Consensus 223 ~~~~~~~~~~~~~~~s~~~~a~dv~~ll~ 251 (451)
.-+++++++|+..+++
T Consensus 64 -------------~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 64 -------------IDSFDDYVDDLHQFIQ 79 (79)
T ss_pred -------------cCCHHHHHHHHHHHhC
Confidence 1488999999998874
No 99
>PRK10162 acetyl esterase; Provisional
Probab=99.28 E-value=1.7e-10 Score=111.48 Aligned_cols=99 Identities=16% Similarity=0.127 Sum_probs=71.3
Q ss_pred CCCcEEEecCCC---CChhcHHHHHHhhcC--CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccc
Q 013006 158 NSPPVLFLPGFG---VGSFHYEKQLKDLGK--DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWA 232 (451)
Q Consensus 158 ~~p~VlllHG~~---~~~~~~~~~~~~L~~--~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~ 232 (451)
..|+||++||.+ ++...|+.+...|++ ++.|+.+|+|...... .+
T Consensus 80 ~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrlape~~-----~p------------------------- 129 (318)
T PRK10162 80 SQATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLSPEAR-----FP------------------------- 129 (318)
T ss_pred CCCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCCCCCC-----CC-------------------------
Confidence 468999999976 556678888888864 7999999999643321 11
Q ss_pred cccccCHHHHHHH---HHHHHHHhCC--CCEEEEEeCcchHHHHHHHHhC------CCccceEEEeccC
Q 013006 233 SELAYSVDLWQDQ---VCYFIKEVIR--EPVYVVGNSLGGFVAVYFAACN------PHLVKGVTLLNAT 290 (451)
Q Consensus 233 ~~~~~s~~~~a~d---v~~ll~~l~~--~~v~lvGhS~GG~val~~A~~~------P~~v~~lvl~~~~ 290 (451)
..+++..+. +.+..+.+++ ++++|+|+|+||.+++.++.+. +.++++++++.+.
T Consensus 130 ----~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~ 194 (318)
T PRK10162 130 ----QAIEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGL 194 (318)
T ss_pred ----CcHHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCc
Confidence 234444333 3333445655 5899999999999999988753 3579999999875
No 100
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=99.24 E-value=1.3e-10 Score=108.12 Aligned_cols=226 Identities=15% Similarity=0.179 Sum_probs=88.3
Q ss_pred CCCcEEEecCCCCChhc---HHHHHHhhcC-CceEEEEcCC----CCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCC
Q 013006 158 NSPPVLFLPGFGVGSFH---YEKQLKDLGK-DYRAWAIDFL----GQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQ 229 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~---~~~~~~~L~~-~~~Vi~~D~r----G~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~ 229 (451)
....||||.|++.+... ...++..|.. +|.|+-+-++ |+|.+
T Consensus 32 ~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~~------------------------------ 81 (303)
T PF08538_consen 32 APNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGTS------------------------------ 81 (303)
T ss_dssp SSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S-------------------------------
T ss_pred CCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCcc------------------------------
Confidence 34579999999876543 5667788854 7999888765 44433
Q ss_pred ccccccccCHHHHHHHHHHHHHHh--------CCCCEEEEEeCcchHHHHHHHHhCC-----CccceEEEeccCCCCCCC
Q 013006 230 PWASELAYSVDLWQDQVCYFIKEV--------IREPVYVVGNSLGGFVAVYFAACNP-----HLVKGVTLLNATPFWGFS 296 (451)
Q Consensus 230 ~~~~~~~~s~~~~a~dv~~ll~~l--------~~~~v~lvGhS~GG~val~~A~~~P-----~~v~~lvl~~~~~~~~~~ 296 (451)
+++.-++||.++++.+ +.++|+|+|||.|+.-+++|+.... ..|+++||-+|...-...
T Consensus 82 --------SL~~D~~eI~~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa~ 153 (303)
T PF08538_consen 82 --------SLDRDVEEIAQLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREAI 153 (303)
T ss_dssp ---------HHHHHHHHHHHHHHHHHHS------S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTST
T ss_pred --------hhhhHHHHHHHHHHHHHHhhccccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhHh
Confidence 6666666776666654 3468999999999999999998752 579999999997421111
Q ss_pred CCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCC-ChHHHHHHHHhhccChhHHHHHHH
Q 013006 297 PNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHAT-NVDTVFTRILETTQHPAAAASFAS 375 (451)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 375 (451)
.... .. .....++.+.....+... .-.+.+...+..... ..+-...+++...........|..
T Consensus 154 ~~~~--~~-------------~~~~~~~v~~A~~~i~~g-~~~~~lp~~~~~~~~~~~PiTA~Rf~SL~s~~gdDD~FSS 217 (303)
T PF08538_consen 154 LNFL--GE-------------REAYEELVALAKELIAEG-KGDEILPREFTPLVFYDTPITAYRFLSLASPGGDDDYFSS 217 (303)
T ss_dssp TTSH--HH----------------HHHHHHHHHHHHHCT--TT-GG----GGTTT-SS---HHHHHT-S-SSHHHHTHHH
T ss_pred hhcc--cc-------------hHHHHHHHHHHHHHHHcC-CCCceeeccccccccCCCcccHHHHHhccCCCCcccccCC
Confidence 0000 00 011222222111110000 000011110110000 222334444444444444444444
Q ss_pred HHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHH-HHHHHHCCC--------CcEEEeCCCCCCccccChH
Q 013006 376 IMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWG-LQVKRQVPE--------APYYEISPAGHCPHDEVPE 444 (451)
Q Consensus 376 ~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~-~~l~~~lp~--------~~~~~i~~~gH~~~~e~p~ 444 (451)
.+.. ......+.++++|+|++++++|..+|+..- +.+.+++.. ..-.+||||+|.+-.+..+
T Consensus 218 DL~d-------e~l~~tfG~v~~plLvl~Sg~DEyvP~~vdk~~Ll~rw~~a~~~~~~s~~S~iI~GA~H~~~~~~~~ 288 (303)
T PF08538_consen 218 DLSD-------ERLKKTFGKVSKPLLVLYSGKDEYVPPWVDKEALLERWKAATNPKIWSPLSGIIPGASHNVSGPSQA 288 (303)
T ss_dssp HHTT--------HHHHTGGG--S-EEEEEE--TT--------------------------------------------
T ss_pred CCCH-------HHHHHHhccCCCceEEEecCCCceecccccccccccccccccccccccccccccccccccccccccc
Confidence 3321 344556788999999999999999997543 223333322 1245899999998755433
No 101
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=99.24 E-value=5.2e-10 Score=98.92 Aligned_cols=229 Identities=15% Similarity=0.178 Sum_probs=120.4
Q ss_pred ceeeecCCeEEEEeecCCCC---CCCCcEEEecCCCCChhcHHHHHHhhc-CCceEEEEcCCCC-CCCCCCCCCCCCCCC
Q 013006 137 CFWEWKPKFNVHYEKAGCEN---VNSPPVLFLPGFGVGSFHYEKQLKDLG-KDYRAWAIDFLGQ-GMSLPDEDPTPRSKE 211 (451)
Q Consensus 137 ~~~~~~~g~~l~y~~~g~~~---~~~p~VlllHG~~~~~~~~~~~~~~L~-~~~~Vi~~D~rG~-G~S~~~~~~~~~~~~ 211 (451)
..+...+|.+|+..+.-|.+ ...++||+.+||+....+|..++.+|+ .||+|+.||...| |.|+..-.
T Consensus 5 hvi~~~~~~~I~vwet~P~~~~~~~~~tiliA~Gf~rrmdh~agLA~YL~~NGFhViRyDsl~HvGlSsG~I~------- 77 (294)
T PF02273_consen 5 HVIRLEDGRQIRVWETRPKNNEPKRNNTILIAPGFARRMDHFAGLAEYLSANGFHVIRYDSLNHVGLSSGDIN------- 77 (294)
T ss_dssp EEEEETTTEEEEEEEE---TTS---S-EEEEE-TT-GGGGGGHHHHHHHHTTT--EEEE---B-----------------
T ss_pred ceeEcCCCCEEEEeccCCCCCCcccCCeEEEecchhHHHHHHHHHHHHHhhCCeEEEeccccccccCCCCChh-------
Confidence 45667889999999887753 234899999999999999999999995 5799999998876 77764322
Q ss_pred CCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHh---CCCCEEEEEeCcchHHHHHHHHhCCCccceEEEec
Q 013006 212 GDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEV---IREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLN 288 (451)
Q Consensus 212 ~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l---~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~ 288 (451)
.+++....+++..+++.+ ++.++-||.-|+.|-+|+..|++- .+.-+|..-
T Consensus 78 ------------------------eftms~g~~sL~~V~dwl~~~g~~~~GLIAaSLSaRIAy~Va~~i--~lsfLitaV 131 (294)
T PF02273_consen 78 ------------------------EFTMSIGKASLLTVIDWLATRGIRRIGLIAASLSARIAYEVAADI--NLSFLITAV 131 (294)
T ss_dssp ---------------------------HHHHHHHHHHHHHHHHHTT---EEEEEETTHHHHHHHHTTTS----SEEEEES
T ss_pred ------------------------hcchHHhHHHHHHHHHHHHhcCCCcchhhhhhhhHHHHHHHhhcc--CcceEEEEe
Confidence 278988888888777665 678899999999999999999854 366666665
Q ss_pred cCCCCCCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChh
Q 013006 289 ATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPA 368 (451)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (451)
+... +...+.+.... .++......-+... .......
T Consensus 132 GVVn------------------------lr~TLe~al~~------------Dyl~~~i~~lp~dl--------dfeGh~l 167 (294)
T PF02273_consen 132 GVVN------------------------LRDTLEKALGY------------DYLQLPIEQLPEDL--------DFEGHNL 167 (294)
T ss_dssp --S-------------------------HHHHHHHHHSS-------------GGGS-GGG--SEE--------EETTEEE
T ss_pred eeee------------------------HHHHHHHHhcc------------chhhcchhhCCCcc--------ccccccc
Confidence 4321 00111111000 00000000000000 0000000
Q ss_pred HHHHHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCC--CCcEEEeCCCCCCccccChH
Q 013006 369 AAASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVP--EAPYYEISPAGHCPHDEVPE 444 (451)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp--~~~~~~i~~~gH~~~~e~p~ 444 (451)
....|..--+ ..++.+.......++.+.+|++.+++++|.||......++..... ..+++.++|++|... |+|-
T Consensus 168 ~~~vFv~dc~-e~~w~~l~ST~~~~k~l~iP~iaF~A~~D~WV~q~eV~~~~~~~~s~~~klysl~Gs~HdL~-enl~ 243 (294)
T PF02273_consen 168 GAEVFVTDCF-EHGWDDLDSTINDMKRLSIPFIAFTANDDDWVKQSEVEELLDNINSNKCKLYSLPGSSHDLG-ENLV 243 (294)
T ss_dssp EHHHHHHHHH-HTT-SSHHHHHHHHTT--S-EEEEEETT-TTS-HHHHHHHHTT-TT--EEEEEETT-SS-TT-SSHH
T ss_pred chHHHHHHHH-HcCCccchhHHHHHhhCCCCEEEEEeCCCccccHHHHHHHHHhcCCCceeEEEecCccchhh-hChH
Confidence 0111111110 112334456677788899999999999999999998888887654 467889999999864 4443
No 102
>PRK10115 protease 2; Provisional
Probab=99.24 E-value=5.1e-10 Score=118.51 Aligned_cols=135 Identities=13% Similarity=0.039 Sum_probs=93.6
Q ss_pred CccceeeecCCeEEEE-eecCC---CCCCCCcEEEecCCCCChh--cHHHHHHhh-cCCceEEEEcCCCCCCCCCCCCCC
Q 013006 134 ITSCFWEWKPKFNVHY-EKAGC---ENVNSPPVLFLPGFGVGSF--HYEKQLKDL-GKDYRAWAIDFLGQGMSLPDEDPT 206 (451)
Q Consensus 134 ~~~~~~~~~~g~~l~y-~~~g~---~~~~~p~VlllHG~~~~~~--~~~~~~~~L-~~~~~Vi~~D~rG~G~S~~~~~~~ 206 (451)
....+++..||.+|.+ ....+ .+.+.|.||++||..+... .|......| .+||.|+.++.||-|.=...=.
T Consensus 416 ~e~v~~~s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~w~-- 493 (686)
T PRK10115 416 SEHLWITARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQWY-- 493 (686)
T ss_pred EEEEEEECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCCccCHHHH--
Confidence 4455566789999887 33322 1234699999999766653 354444444 7799999999999765431100
Q ss_pred CCCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHh--CCCCEEEEEeCcchHHHHHHHHhCCCccceE
Q 013006 207 PRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEV--IREPVYVVGNSLGGFVAVYFAACNPHLVKGV 284 (451)
Q Consensus 207 ~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l--~~~~v~lvGhS~GG~val~~A~~~P~~v~~l 284 (451)
+...+.. ...+++|+++.+..+++.- ..+++.+.|.|.||+++..++.++|++++++
T Consensus 494 -----------~~g~~~~----------k~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~ 552 (686)
T PRK10115 494 -----------EDGKFLK----------KKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGV 552 (686)
T ss_pred -----------Hhhhhhc----------CCCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChhheeEE
Confidence 0000000 1157888888888777652 2368999999999999999999999999999
Q ss_pred EEeccCC
Q 013006 285 TLLNATP 291 (451)
Q Consensus 285 vl~~~~~ 291 (451)
|...+..
T Consensus 553 v~~vp~~ 559 (686)
T PRK10115 553 IAQVPFV 559 (686)
T ss_pred EecCCch
Confidence 9998753
No 103
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.23 E-value=2.7e-10 Score=102.14 Aligned_cols=231 Identities=19% Similarity=0.134 Sum_probs=137.1
Q ss_pred cceeeecCCeEEEEeecCCCC--CCCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 013006 136 SCFWEWKPKFNVHYEKAGCEN--VNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGD 213 (451)
Q Consensus 136 ~~~~~~~~g~~l~y~~~g~~~--~~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~ 213 (451)
.-.++..+|.+|+-+..-|.. ...|.||-.||++++...|..++..-..+|.|+.+|.||+|.|.......+.+
T Consensus 58 dvTf~g~~g~rI~gwlvlP~~~~~~~P~vV~fhGY~g~~g~~~~~l~wa~~Gyavf~MdvRGQg~~~~dt~~~p~~---- 133 (321)
T COG3458 58 DVTFTGYGGARIKGWLVLPRHEKGKLPAVVQFHGYGGRGGEWHDMLHWAVAGYAVFVMDVRGQGSSSQDTADPPGG---- 133 (321)
T ss_pred EEEEeccCCceEEEEEEeecccCCccceEEEEeeccCCCCCccccccccccceeEEEEecccCCCccccCCCCCCC----
Confidence 344555577888776655532 24588999999999998998888777889999999999999985421111111
Q ss_pred chhhhhccccC-----CCCCCccccccccCHHHHHHHHHHHHHH------hCCCCEEEEEeCcchHHHHHHHHhCCCccc
Q 013006 214 STEEKNFLWGF-----GDKAQPWASELAYSVDLWQDQVCYFIKE------VIREPVYVVGNSLGGFVAVYFAACNPHLVK 282 (451)
Q Consensus 214 ~~~~~~~~w~~-----~~~~~~~~~~~~~s~~~~a~dv~~ll~~------l~~~~v~lvGhS~GG~val~~A~~~P~~v~ 282 (451)
+..=|| -|.... |-+.....|+..+++. ..-+++.+-|.|.||.+++..++..| +++
T Consensus 134 -----~s~pG~mtrGilD~kd~------yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~-rik 201 (321)
T COG3458 134 -----PSDPGFMTRGILDRKDT------YYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP-RIK 201 (321)
T ss_pred -----CcCCceeEeecccCCCc------eEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcCh-hhh
Confidence 011111 110111 1122223333333333 34478999999999999999999887 799
Q ss_pred eEEEeccCCCCCCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHh
Q 013006 283 GVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILE 362 (451)
Q Consensus 283 ~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (451)
+++..-|.- .- +..+... ........ +..+++ .+.....+.++
T Consensus 202 ~~~~~~Pfl--~d------------f~r~i~~-~~~~~yde--------------i~~y~k----~h~~~e~~v~~---- 244 (321)
T COG3458 202 AVVADYPFL--SD------------FPRAIEL-ATEGPYDE--------------IQTYFK----RHDPKEAEVFE---- 244 (321)
T ss_pred ccccccccc--cc------------chhheee-cccCcHHH--------------HHHHHH----hcCchHHHHHH----
Confidence 998877631 00 0001000 00000111 111111 11111111111
Q ss_pred hccChhHHHHHHHHHhcCCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCC-CcEEEeCCCCCCcc
Q 013006 363 TTQHPAAAASFASIMFAPQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPE-APYYEISPAGHCPH 439 (451)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~-~~~~~i~~~gH~~~ 439 (451)
. +.+.+......++++|+|+..|--|+++||...-...+.++. .++.+++.-+|.-.
T Consensus 245 ------------T--------L~yfD~~n~A~RiK~pvL~svgL~D~vcpPstqFA~yN~l~~~K~i~iy~~~aHe~~ 302 (321)
T COG3458 245 ------------T--------LSYFDIVNLAARIKVPVLMSVGLMDPVCPPSTQFAAYNALTTSKTIEIYPYFAHEGG 302 (321)
T ss_pred ------------H--------HhhhhhhhHHHhhccceEEeecccCCCCCChhhHHHhhcccCCceEEEeeccccccC
Confidence 1 112233344456899999999999999999999999999986 45667776667643
No 104
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.22 E-value=5.2e-10 Score=102.91 Aligned_cols=167 Identities=19% Similarity=0.138 Sum_probs=119.7
Q ss_pred CcEEEecCCCCChhcHHHHHHhhcC-CceEEEEcCCCCC-CCCCCCCCCCCCCCCCchhhhhccccCCCCCCcccccccc
Q 013006 160 PPVLFLPGFGVGSFHYEKQLKDLGK-DYRAWAIDFLGQG-MSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAY 237 (451)
Q Consensus 160 p~VlllHG~~~~~~~~~~~~~~L~~-~~~Vi~~D~rG~G-~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 237 (451)
|.||++|+..+-....+...+.|+. ||.|+++|+-+.. .+...... ......+ .....
T Consensus 28 P~VIv~hei~Gl~~~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~-------------~~~~~~~-------~~~~~ 87 (236)
T COG0412 28 PGVIVLHEIFGLNPHIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDE-------------PAELETG-------LVERV 87 (236)
T ss_pred CEEEEEecccCCchHHHHHHHHHHhCCcEEEechhhccCCCCCccccc-------------HHHHhhh-------hhccC
Confidence 8999999998888899999999965 8999999998743 33221100 0000000 00012
Q ss_pred CHHHHHHHHHHHHHHhC------CCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCchHHhhhcCC
Q 013006 238 SVDLWQDQVCYFIKEVI------REPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPW 311 (451)
Q Consensus 238 s~~~~a~dv~~ll~~l~------~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (451)
+......|+.+.++.|. .++|.++|+||||.+++.++.+.| .|++.+..-+....
T Consensus 88 ~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg~~~~------------------ 148 (236)
T COG0412 88 DPAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYGGLIA------------------ 148 (236)
T ss_pred CHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecCCCCC------------------
Confidence 34677778888877773 467999999999999999999988 78888888764210
Q ss_pred CCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCCCCCchhHHhh
Q 013006 312 SGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSFREALS 391 (451)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (451)
....
T Consensus 149 ----------------------------------------------------------------------------~~~~ 152 (236)
T COG0412 149 ----------------------------------------------------------------------------DDTA 152 (236)
T ss_pred ----------------------------------------------------------------------------Cccc
Confidence 0000
Q ss_pred hccCCCCCEEEEeeCCCCCCChHHHHHHHHHCC----CCcEEEeCCCCCCcccc
Q 013006 392 RCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVP----EAPYYEISPAGHCPHDE 441 (451)
Q Consensus 392 ~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp----~~~~~~i~~~gH~~~~e 441 (451)
...++++|+|+++|+.|+.+|......+.+.+. ..++.+++++.|.++-+
T Consensus 153 ~~~~~~~pvl~~~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~y~ga~H~F~~~ 206 (236)
T COG0412 153 DAPKIKVPVLLHLAGEDPYIPAADVDALAAALEDAGVKVDLEIYPGAGHGFAND 206 (236)
T ss_pred ccccccCcEEEEecccCCCCChhHHHHHHHHHHhcCCCeeEEEeCCCccccccC
Confidence 024579999999999999999987777766553 45688999999988755
No 105
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=99.20 E-value=3.7e-10 Score=107.85 Aligned_cols=253 Identities=13% Similarity=0.127 Sum_probs=142.3
Q ss_pred CCCcEEEecCCCCChhcHH-----HHHHhh-cCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCcc
Q 013006 158 NSPPVLFLPGFGVGSFHYE-----KQLKDL-GKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPW 231 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~~~-----~~~~~L-~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~ 231 (451)
-.+|+|++|-+-.....|+ .++..| .+|+.|+.+|+++-..+.. .|++++
T Consensus 106 ~~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~-------------------~~~~ed----- 161 (445)
T COG3243 106 LKRPLLIVPPWINKFYILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLA-------------------AKNLED----- 161 (445)
T ss_pred CCCceEeeccccCceeEEeCCCCccHHHHHHHcCCceEEEeccCchHhhh-------------------hccHHH-----
Confidence 4689999999887776664 456665 5689999999998766542 122211
Q ss_pred ccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCc-cceEEEeccCCCCCCC---CCCCCchHHhh
Q 013006 232 ASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHL-VKGVTLLNATPFWGFS---PNPIRSPKLAR 307 (451)
Q Consensus 232 ~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~-v~~lvl~~~~~~~~~~---~~~~~~~~~~~ 307 (451)
|-.+.+.+.+..+.+..+.++|.++|+|.||+++..+++.++.+ |++++++.+...+... ........+..
T Consensus 162 -----Yi~e~l~~aid~v~~itg~~~InliGyCvGGtl~~~ala~~~~k~I~S~T~lts~~DF~~~g~l~if~n~~~~~~ 236 (445)
T COG3243 162 -----YILEGLSEAIDTVKDITGQKDINLIGYCVGGTLLAAALALMAAKRIKSLTLLTSPVDFSHAGDLGIFANEATIEA 236 (445)
T ss_pred -----HHHHHHHHHHHHHHHHhCccccceeeEecchHHHHHHHHhhhhcccccceeeecchhhccccccccccCHHHHHH
Confidence 45556667777777778889999999999999999999999887 9999998875322110 00011111111
Q ss_pred hcCCCCCC-CChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHH-hhccChhH-HHHHH-HHHh---cC
Q 013006 308 ILPWSGTF-PLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRIL-ETTQHPAA-AASFA-SIMF---AP 380 (451)
Q Consensus 308 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~-~~~~---~~ 380 (451)
+..-.... .++.. .....+..+.....+..+.-..|........-....+. ....-+.. ...+. .++. ..
T Consensus 237 ~~~~i~~~g~lpg~---~ma~~F~mLrpndliw~~fV~nyl~ge~pl~fdllyWn~dst~~~~~~~~~~Lrn~y~~N~l~ 313 (445)
T COG3243 237 LDADIVQKGILPGW---YMAIVFFLLRPNDLIWNYFVNNYLDGEQPLPFDLLYWNADSTRLPGAAHSEYLRNFYLENRLI 313 (445)
T ss_pred HHhhhhhccCCChH---HHHHHHHhcCccccchHHHHHHhcCCCCCCchhHHHhhCCCccCchHHHHHHHHHHHHhChhh
Confidence 11000000 11111 11111111222222222322223222222221111111 11111111 11111 1111 01
Q ss_pred CCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccC
Q 013006 381 QGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEV 442 (451)
Q Consensus 381 ~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~ 442 (451)
.+.+......-.+.+|+||++++.|++|.++|+.......+.+++-...+.-++||.-..-.
T Consensus 314 ~g~~~v~G~~VdL~~It~pvy~~a~~~DhI~P~~Sv~~g~~l~~g~~~f~l~~sGHIa~vVN 375 (445)
T COG3243 314 RGGLEVSGTMVDLGDITCPVYNLAAEEDHIAPWSSVYLGARLLGGEVTFVLSRSGHIAGVVN 375 (445)
T ss_pred ccceEECCEEechhhcccceEEEeecccccCCHHHHHHHHHhcCCceEEEEecCceEEEEeC
Confidence 13333334444678999999999999999999999999999999833344447899865544
No 106
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.19 E-value=7.6e-10 Score=94.52 Aligned_cols=161 Identities=16% Similarity=0.130 Sum_probs=104.9
Q ss_pred CCCCcEEEecCCCCCh-----hcHHHHHHhhc-CCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCc
Q 013006 157 VNSPPVLFLPGFGVGS-----FHYEKQLKDLG-KDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQP 230 (451)
Q Consensus 157 ~~~p~VlllHG~~~~~-----~~~~~~~~~L~-~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~ 230 (451)
+..|..|++|--+... ..-..++..|. +||.++.+|+||.|+|...-+.- .
T Consensus 26 ~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~fD~G-----------------i------ 82 (210)
T COG2945 26 PAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEFDNG-----------------I------ 82 (210)
T ss_pred CCCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCcccCC-----------------c------
Confidence 3567788887653222 22344555564 48999999999999997543211 1
Q ss_pred cccccccCHHHHHHHHHHHHHHhCCCC-EEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCchHHhhhc
Q 013006 231 WASELAYSVDLWQDQVCYFIKEVIREP-VYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARIL 309 (451)
Q Consensus 231 ~~~~~~~s~~~~a~dv~~ll~~l~~~~-v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 309 (451)
--.+|....+.-+.......+ ..+.|+|+|+.|++.+|.+.|+ ....+.+.+.+.
T Consensus 83 ------GE~~Da~aaldW~~~~hp~s~~~~l~GfSFGa~Ia~~la~r~~e-~~~~is~~p~~~----------------- 138 (210)
T COG2945 83 ------GELEDAAAALDWLQARHPDSASCWLAGFSFGAYIAMQLAMRRPE-ILVFISILPPIN----------------- 138 (210)
T ss_pred ------chHHHHHHHHHHHHhhCCCchhhhhcccchHHHHHHHHHHhccc-ccceeeccCCCC-----------------
Confidence 133443333332222222233 4689999999999999999886 444444444210
Q ss_pred CCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCCCCCchhHH
Q 013006 310 PWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSFREA 389 (451)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (451)
. ..
T Consensus 139 -------------------------------------------------------------------------~----~d 141 (210)
T COG2945 139 -------------------------------------------------------------------------A----YD 141 (210)
T ss_pred -------------------------------------------------------------------------c----hh
Confidence 0 00
Q ss_pred hhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccC
Q 013006 390 LSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEV 442 (451)
Q Consensus 390 ~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~ 442 (451)
...+....+|.++|+|+.|.+++++...++++. ...+++++++++||++-..
T Consensus 142 fs~l~P~P~~~lvi~g~~Ddvv~l~~~l~~~~~-~~~~~i~i~~a~HFF~gKl 193 (210)
T COG2945 142 FSFLAPCPSPGLVIQGDADDVVDLVAVLKWQES-IKITVITIPGADHFFHGKL 193 (210)
T ss_pred hhhccCCCCCceeEecChhhhhcHHHHHHhhcC-CCCceEEecCCCceecccH
Confidence 011233578999999999999999988888887 4578899999999988543
No 107
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=99.17 E-value=2.3e-10 Score=131.35 Aligned_cols=100 Identities=19% Similarity=0.162 Sum_probs=87.8
Q ss_pred CCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCcccccccc
Q 013006 158 NSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAY 237 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 237 (451)
++++++++||++++...|..+...|..+++|+++|.+|+|.+... .+
T Consensus 1067 ~~~~l~~lh~~~g~~~~~~~l~~~l~~~~~v~~~~~~g~~~~~~~---------------------------------~~ 1113 (1296)
T PRK10252 1067 DGPTLFCFHPASGFAWQFSVLSRYLDPQWSIYGIQSPRPDGPMQT---------------------------------AT 1113 (1296)
T ss_pred CCCCeEEecCCCCchHHHHHHHHhcCCCCcEEEEECCCCCCCCCC---------------------------------CC
Confidence 357899999999999999999999998999999999999865311 17
Q ss_pred CHHHHHHHHHHHHHHhCC-CCEEEEEeCcchHHHHHHHHh---CCCccceEEEeccC
Q 013006 238 SVDLWQDQVCYFIKEVIR-EPVYVVGNSLGGFVAVYFAAC---NPHLVKGVTLLNAT 290 (451)
Q Consensus 238 s~~~~a~dv~~ll~~l~~-~~v~lvGhS~GG~val~~A~~---~P~~v~~lvl~~~~ 290 (451)
+++++++++.+.++.+.. .+++++||||||.+|+++|.+ .++++..++++++.
T Consensus 1114 ~l~~la~~~~~~i~~~~~~~p~~l~G~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~~ 1170 (1296)
T PRK10252 1114 SLDEVCEAHLATLLEQQPHGPYHLLGYSLGGTLAQGIAARLRARGEEVAFLGLLDTW 1170 (1296)
T ss_pred CHHHHHHHHHHHHHhhCCCCCEEEEEechhhHHHHHHHHHHHHcCCceeEEEEecCC
Confidence 999999999999988764 589999999999999999986 57899999999874
No 108
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.15 E-value=1.3e-09 Score=95.97 Aligned_cols=84 Identities=26% Similarity=0.368 Sum_probs=64.8
Q ss_pred EEEecCCCCChhcHHH--HHHhhcC---CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccc
Q 013006 162 VLFLPGFGVGSFHYEK--QLKDLGK---DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELA 236 (451)
Q Consensus 162 VlllHG~~~~~~~~~~--~~~~L~~---~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 236 (451)
||++|||..+...... +.+.+++ ...++++|++
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~------------------------------------------ 39 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLP------------------------------------------ 39 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCC------------------------------------------
Confidence 8999999988876543 3344543 3566666654
Q ss_pred cCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccC
Q 013006 237 YSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNAT 290 (451)
Q Consensus 237 ~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~ 290 (451)
...+...+.+..+++....+.+.|||.||||+.|..+|.+++ +++ ||++|+
T Consensus 40 ~~p~~a~~~l~~~i~~~~~~~~~liGSSlGG~~A~~La~~~~--~~a-vLiNPa 90 (187)
T PF05728_consen 40 PFPEEAIAQLEQLIEELKPENVVLIGSSLGGFYATYLAERYG--LPA-VLINPA 90 (187)
T ss_pred cCHHHHHHHHHHHHHhCCCCCeEEEEEChHHHHHHHHHHHhC--CCE-EEEcCC
Confidence 356677788888999988878999999999999999999985 444 999986
No 109
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=99.06 E-value=3.9e-08 Score=99.42 Aligned_cols=127 Identities=20% Similarity=0.203 Sum_probs=87.1
Q ss_pred ccceeeecC---CeEEEEeecCCC--CCCCCcEEEecCCCCChhcHHHHHH-----------h-------hcCCceEEEE
Q 013006 135 TSCFWEWKP---KFNVHYEKAGCE--NVNSPPVLFLPGFGVGSFHYEKQLK-----------D-------LGKDYRAWAI 191 (451)
Q Consensus 135 ~~~~~~~~~---g~~l~y~~~g~~--~~~~p~VlllHG~~~~~~~~~~~~~-----------~-------L~~~~~Vi~~ 191 (451)
.+.++...+ +..++|..+... ..+.|.||.++|.++.+..+-.+.+ . +.+...|+.+
T Consensus 48 ~sGy~~v~~~~~~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~~~~~~l~i 127 (462)
T PTZ00472 48 WSGYFDIPGNQTDKHYFYWAFGPRNGNPEAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWNNEAYVIYV 127 (462)
T ss_pred eeEEEEeCCCCCCceEEEEEEEcCCCCCCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCcccccccCeEEE
Confidence 355666643 677888766532 2356999999999988877533221 1 2234789999
Q ss_pred cCC-CCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHh-------CCCCEEEEEe
Q 013006 192 DFL-GQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEV-------IREPVYVVGN 263 (451)
Q Consensus 192 D~r-G~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l-------~~~~v~lvGh 263 (451)
|.| |+|.|....... ..+.++.++|+..+++.. ...+++|+||
T Consensus 128 DqP~G~G~S~~~~~~~-----------------------------~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~Ge 178 (462)
T PTZ00472 128 DQPAGVGFSYADKADY-----------------------------DHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGE 178 (462)
T ss_pred eCCCCcCcccCCCCCC-----------------------------CCChHHHHHHHHHHHHHHHHhCccccCCCEEEEee
Confidence 975 888886422110 145677888888888743 4578999999
Q ss_pred CcchHHHHHHHHhC----------CCccceEEEeccC
Q 013006 264 SLGGFVAVYFAACN----------PHLVKGVTLLNAT 290 (451)
Q Consensus 264 S~GG~val~~A~~~----------P~~v~~lvl~~~~ 290 (451)
|+||.++..+|.+. +=.++++++-++.
T Consensus 179 SygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg~ 215 (462)
T PTZ00472 179 SYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNGL 215 (462)
T ss_pred cchhhhHHHHHHHHHhhccccCCceeeeEEEEEeccc
Confidence 99999998887752 1147888888874
No 110
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.06 E-value=3.8e-09 Score=99.92 Aligned_cols=117 Identities=19% Similarity=0.101 Sum_probs=75.5
Q ss_pred CCeEEEEeecCC--C-CCCCCcEEEecCCCCCh-hcHHHH--HH--------hhcCCceEEEEcCCCCCCCCCCCCCCCC
Q 013006 143 PKFNVHYEKAGC--E-NVNSPPVLFLPGFGVGS-FHYEKQ--LK--------DLGKDYRAWAIDFLGQGMSLPDEDPTPR 208 (451)
Q Consensus 143 ~g~~l~y~~~g~--~-~~~~p~VlllHG~~~~~-~~~~~~--~~--------~L~~~~~Vi~~D~rG~G~S~~~~~~~~~ 208 (451)
||++|....+-| . ..+-|+||..|+++... ...... .. ...+||.|+..|.||.|.|+..-.+
T Consensus 1 DGv~L~adv~~P~~~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~--- 77 (272)
T PF02129_consen 1 DGVRLAADVYRPGADGGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDP--- 77 (272)
T ss_dssp TS-EEEEEEEEE--TTSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-T---
T ss_pred CCCEEEEEEEecCCCCCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCcccc---
Confidence 677787776665 2 23448888889998653 222111 11 3366899999999999999754322
Q ss_pred CCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHh---CC--CCEEEEEeCcchHHHHHHHHhCCCccce
Q 013006 209 SKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEV---IR--EPVYVVGNSLGGFVAVYFAACNPHLVKG 283 (451)
Q Consensus 209 ~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l---~~--~~v~lvGhS~GG~val~~A~~~P~~v~~ 283 (451)
....-++|..++|+-+ .. .+|.++|.|++|++++.+|+..|..+++
T Consensus 78 -----------------------------~~~~e~~D~~d~I~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~~~p~LkA 128 (272)
T PF02129_consen 78 -----------------------------MSPNEAQDGYDTIEWIAAQPWSNGKVGMYGISYGGFTQWAAAARRPPHLKA 128 (272)
T ss_dssp -----------------------------TSHHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTTT-TTEEE
T ss_pred -----------------------------CChhHHHHHHHHHHHHHhCCCCCCeEEeeccCHHHHHHHHHHhcCCCCceE
Confidence 1233344444444443 33 4799999999999999999988889999
Q ss_pred EEEeccCC
Q 013006 284 VTLLNATP 291 (451)
Q Consensus 284 lvl~~~~~ 291 (451)
++...+..
T Consensus 129 i~p~~~~~ 136 (272)
T PF02129_consen 129 IVPQSGWS 136 (272)
T ss_dssp EEEESE-S
T ss_pred EEecccCC
Confidence 99987753
No 111
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=99.02 E-value=1.4e-08 Score=91.55 Aligned_cols=112 Identities=21% Similarity=0.302 Sum_probs=72.2
Q ss_pred CCcEEEecCCCCChhcHHHH--HHhhcC--CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccc
Q 013006 159 SPPVLFLPGFGVGSFHYEKQ--LKDLGK--DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASE 234 (451)
Q Consensus 159 ~p~VlllHG~~~~~~~~~~~--~~~L~~--~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 234 (451)
.|.||++||.+.+...+... +..|++ +|-|+.++....... .++ |.+.......
T Consensus 16 ~PLVv~LHG~~~~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~-----------------~~c--w~w~~~~~~~--- 73 (220)
T PF10503_consen 16 VPLVVVLHGCGQSAEDFAAGSGWNALADREGFIVVYPEQSRRANP-----------------QGC--WNWFSDDQQR--- 73 (220)
T ss_pred CCEEEEeCCCCCCHHHHHhhcCHHHHhhcCCeEEEcccccccCCC-----------------CCc--cccccccccc---
Confidence 58899999999998877553 344654 577888875422111 111 2111110000
Q ss_pred cccCHHHHHHHHHHHHHHhCC--CCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCC
Q 013006 235 LAYSVDLWQDQVCYFIKEVIR--EPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPF 292 (451)
Q Consensus 235 ~~~s~~~~a~dv~~ll~~l~~--~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~ 292 (451)
..-+...+++-+..+.++..+ .+|++.|+|.||+++..++..+|+++.++.+++..++
T Consensus 74 g~~d~~~i~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~~ 133 (220)
T PF10503_consen 74 GGGDVAFIAALVDYVAARYNIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVPY 133 (220)
T ss_pred CccchhhHHHHHHhHhhhcccCCCceeeEEECHHHHHHHHHHHhCCccceEEEeeccccc
Confidence 001233344445555566555 5799999999999999999999999999999988653
No 112
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=98.99 E-value=2.1e-09 Score=97.61 Aligned_cols=187 Identities=21% Similarity=0.188 Sum_probs=93.9
Q ss_pred CCCcEEEecCCCCChhcHHHHHHh----hcC-CceEEEEcCCCCCCCCCCCCCCCCCC----CCCchhhhhccccCCCCC
Q 013006 158 NSPPVLFLPGFGVGSFHYEKQLKD----LGK-DYRAWAIDFLGQGMSLPDEDPTPRSK----EGDSTEEKNFLWGFGDKA 228 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~~~~~~~~----L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~----~~~~~~~~~~~w~~~~~~ 228 (451)
.++.||+|||++.++..+..+... |.+ ++.++.+|-|---... ..-..... .....+.-+.||...+.
T Consensus 3 ~k~riLcLHG~~~na~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~--~~~~~~~~~~~~~~~~~~~~~~W~~~~~~- 79 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAEIFRQQTSALRKALKKLDFEFVFVDGPHEVPPG--PGIEPFSSEAESAFGDPGPFYSWWDPDDD- 79 (212)
T ss_dssp ---EEEEE--TT--HHHHHHHTHHHHHHHHHTT-EEEEE--SEE---G--GG-SS---HHHHHHHHTT--EESS---S--
T ss_pred CCceEEEeCCCCcCHHHHHHHHHHHHHHHhhCcEEEEEecCCcccCCc--ccccccccccccccCCCCcceeeeecCCC-
Confidence 357899999999999999876654 455 7999999876422000 00000000 00001133445544332
Q ss_pred CccccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhC--------CCccceEEEeccCCCCCCCCCCC
Q 013006 229 QPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACN--------PHLVKGVTLLNATPFWGFSPNPI 300 (451)
Q Consensus 229 ~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~--------P~~v~~lvl~~~~~~~~~~~~~~ 300 (451)
......+++..+.+.+++++.+. =.-|+|+|.||.+|..++... ...++-+|++++....
T Consensus 80 ----~~~~~~~~~sl~~l~~~i~~~GP-fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~------- 147 (212)
T PF03959_consen 80 ----DHEYEGLDESLDYLRDYIEENGP-FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPP------- 147 (212)
T ss_dssp ----SGGG---HHHHHHHHHHHHHH----SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----E-------
T ss_pred ----cccccCHHHHHHHHHHHHHhcCC-eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCC-------
Confidence 11124566777777777777653 345999999999999888642 1247888888874210
Q ss_pred CchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcC
Q 013006 301 RSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAP 380 (451)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (451)
.+.
T Consensus 148 ---------------------------------~~~-------------------------------------------- 150 (212)
T PF03959_consen 148 ---------------------------------DPD-------------------------------------------- 150 (212)
T ss_dssp ---------------------------------EE---------------------------------------------
T ss_pred ---------------------------------chh--------------------------------------------
Confidence 000
Q ss_pred CCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCC-CcEEEeCCCCCCccccCh
Q 013006 381 QGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPE-APYYEISPAGHCPHDEVP 443 (451)
Q Consensus 381 ~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~-~~~~~i~~~gH~~~~e~p 443 (451)
+.+.. .-.++++|+|-|+|++|.+++++..+.+.+.+.+ .+++..+ +||.+....+
T Consensus 151 -----~~~~~-~~~~i~iPtlHv~G~~D~~~~~~~s~~L~~~~~~~~~v~~h~-gGH~vP~~~~ 207 (212)
T PF03959_consen 151 -----YQELY-DEPKISIPTLHVIGENDPVVPPERSEALAEMFDPDARVIEHD-GGHHVPRKKE 207 (212)
T ss_dssp -----GTTTT---TT---EEEEEEETT-SSS-HHHHHHHHHHHHHHEEEEEES-SSSS----HH
T ss_pred -----hhhhh-ccccCCCCeEEEEeCCCCCcchHHHHHHHHhccCCcEEEEEC-CCCcCcCChh
Confidence 00000 1245799999999999999999999999998877 7888885 5898876543
No 113
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=98.99 E-value=2.6e-08 Score=84.24 Aligned_cols=119 Identities=18% Similarity=0.242 Sum_probs=86.6
Q ss_pred cCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCchHHhhhcCCCCCCC
Q 013006 237 YSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFP 316 (451)
Q Consensus 237 ~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (451)
-..++|++.+.+-+... .++++||+||+|+.+++.++.+....|+|++|+++.-. .
T Consensus 41 P~~~dWi~~l~~~v~a~-~~~~vlVAHSLGc~~v~h~~~~~~~~V~GalLVAppd~-~---------------------- 96 (181)
T COG3545 41 PVLDDWIARLEKEVNAA-EGPVVLVAHSLGCATVAHWAEHIQRQVAGALLVAPPDV-S---------------------- 96 (181)
T ss_pred CCHHHHHHHHHHHHhcc-CCCeEEEEecccHHHHHHHHHhhhhccceEEEecCCCc-c----------------------
Confidence 48899999998888877 46799999999999999999987779999999998521 0
Q ss_pred ChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCCCCCchhHHhhhccCC
Q 013006 317 LPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSFREALSRCQMN 396 (451)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i 396 (451)
.++...... . .++... ....
T Consensus 97 -----------------~~~~~~~~~-------------------~--------------------tf~~~p----~~~l 116 (181)
T COG3545 97 -----------------RPEIRPKHL-------------------M--------------------TFDPIP----REPL 116 (181)
T ss_pred -----------------ccccchhhc-------------------c--------------------ccCCCc----cccC
Confidence 000000000 0 000000 1234
Q ss_pred CCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccc
Q 013006 397 GVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHD 440 (451)
Q Consensus 397 ~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~ 440 (451)
.-|.+++..++|++++++.++.+++.+ ++.++.+..+||+.-.
T Consensus 117 pfps~vvaSrnDp~~~~~~a~~~a~~w-gs~lv~~g~~GHiN~~ 159 (181)
T COG3545 117 PFPSVVVASRNDPYVSYEHAEDLANAW-GSALVDVGEGGHINAE 159 (181)
T ss_pred CCceeEEEecCCCCCCHHHHHHHHHhc-cHhheecccccccchh
Confidence 669999999999999999999999998 4567777788998543
No 114
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=98.94 E-value=7e-09 Score=94.69 Aligned_cols=103 Identities=20% Similarity=0.311 Sum_probs=71.3
Q ss_pred CCCcEEEecCCCCChhcHHHHHHhhc---------CCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCC
Q 013006 158 NSPPVLFLPGFGVGSFHYEKQLKDLG---------KDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKA 228 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~~~~~~~~L~---------~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~ 228 (451)
++.||||+||.+++...|+.+...+. ..++++++|+......-....
T Consensus 3 ~g~pVlFIhG~~Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~g~~------------------------ 58 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYKQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFHGRT------------------------ 58 (225)
T ss_pred CCCEEEEECcCCCCHhHHHHHHHHHhhhhhhccCccceeEEEeccCcccccccccc------------------------
Confidence 56899999999999988887765551 148899999876532211000
Q ss_pred CccccccccCHHHHHHHHHHHHHHh-----CCCCEEEEEeCcchHHHHHHHHhCC---CccceEEEeccC
Q 013006 229 QPWASELAYSVDLWQDQVCYFIKEV-----IREPVYVVGNSLGGFVAVYFAACNP---HLVKGVTLLNAT 290 (451)
Q Consensus 229 ~~~~~~~~~s~~~~a~dv~~ll~~l-----~~~~v~lvGhS~GG~val~~A~~~P---~~v~~lvl~~~~ 290 (451)
+....+.+.+.+..+++.+ +.++++||||||||.++..++...+ +.|+.+|.++++
T Consensus 59 ------l~~q~~~~~~~i~~i~~~~~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tP 122 (225)
T PF07819_consen 59 ------LQRQAEFLAEAIKYILELYKSNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTP 122 (225)
T ss_pred ------HHHHHHHHHHHHHHHHHhhhhccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCC
Confidence 0012233444555555655 4578999999999999988876543 579999999975
No 115
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.93 E-value=8.1e-08 Score=85.30 Aligned_cols=257 Identities=20% Similarity=0.278 Sum_probs=142.8
Q ss_pred CCCcEEEecCCCCChhcHHHHHHhhc----CCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCcccc
Q 013006 158 NSPPVLFLPGFGVGSFHYEKQLKDLG----KDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWAS 233 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~~~~~~~~L~----~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~ 233 (451)
+++.|+.++|.++....|.++...|- +.+.||.+-..||-.-...-... .....
T Consensus 28 ~~~li~~IpGNPG~~gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~----------------------~s~~~ 85 (301)
T KOG3975|consen 28 DKPLIVWIPGNPGLLGFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLRED----------------------HSHTN 85 (301)
T ss_pred CceEEEEecCCCCchhHHHHHHHHHHHhcccccceeEEeccccccCCcccccc----------------------ccccc
Confidence 56889999999999999999888763 34679999988886543110000 00011
Q ss_pred ccccCHHHHHHHHHHHHHHhCC--CCEEEEEeCcchHHHHHHHHhC--CCccceEEEeccCCC-CCCCCCCCCchHHhhh
Q 013006 234 ELAYSVDLWQDQVCYFIKEVIR--EPVYVVGNSLGGFVAVYFAACN--PHLVKGVTLLNATPF-WGFSPNPIRSPKLARI 308 (451)
Q Consensus 234 ~~~~s~~~~a~dv~~ll~~l~~--~~v~lvGhS~GG~val~~A~~~--P~~v~~lvl~~~~~~-~~~~~~~~~~~~~~~~ 308 (451)
+-.++++++++.=.+|++..-. .+++++|||.|+++.+.+.... --.|.+++++-|+.- +.-.+++.. +...
T Consensus 86 ~eifsL~~QV~HKlaFik~~~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTIerM~eSpnG~~---~t~~ 162 (301)
T KOG3975|consen 86 EEIFSLQDQVDHKLAFIKEYVPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTIERMHESPNGIR---LTKV 162 (301)
T ss_pred ccccchhhHHHHHHHHHHHhCCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchHHHHhcCCCceE---eeee
Confidence 1238999999999999987743 6899999999999999988743 236888888877521 111111111 1111
Q ss_pred cCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCCCCCc--h
Q 013006 309 LPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLS--F 386 (451)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 386 (451)
..|... ...+.... -....|..++.++.+.+........+.....+.. .++...+..... ....+. .
T Consensus 163 l~~~~h------v~~lt~yi-~~~~lp~~ir~~Li~~~l~~~n~p~e~l~tal~l-~h~~v~rn~v~l---a~qEm~eV~ 231 (301)
T KOG3975|consen 163 LRYLPH------VVSLTSYI-YWILLPGFIRFILIKFMLCGSNGPQEFLSTALFL-THPQVVRNSVGL---AAQEMEEVT 231 (301)
T ss_pred eeeehh------hhheeeee-eeecChHHHHHHHHHHhcccCCCcHHHHhhHHHh-hcHHHHHHHhhh---chHHHHHHH
Confidence 111100 00000000 0011233333333333333332222222111111 111111110000 000000 0
Q ss_pred hHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEE-eCCCCCCccccChHHHHhhh
Q 013006 387 REALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYE-ISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 387 ~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~-i~~~gH~~~~e~p~~v~~~I 450 (451)
....+-+.+..+-+-+.+|.+|.|+|.+....+++.+|...+.. .++..|.+-..+.+..+..+
T Consensus 232 ~~d~e~~een~d~l~Fyygt~DgW~p~~~~d~~kdd~~eed~~Ldedki~HAFV~~~~q~ma~~v 296 (301)
T KOG3975|consen 232 TRDIEYCEENLDSLWFYYGTNDGWVPSHYYDYYKDDVPEEDLKLDEDKIPHAFVVKHAQYMANAV 296 (301)
T ss_pred HhHHHHHHhcCcEEEEEccCCCCCcchHHHHHHhhhcchhceeeccccCCcceeecccHHHHHHH
Confidence 11122234456788899999999999999999999999754332 26788988888777766654
No 116
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=98.92 E-value=1.1e-08 Score=92.81 Aligned_cols=95 Identities=20% Similarity=0.297 Sum_probs=61.5
Q ss_pred EEEecCCCC---ChhcHHHHHHhhc--CCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccc
Q 013006 162 VLFLPGFGV---GSFHYEKQLKDLG--KDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELA 236 (451)
Q Consensus 162 VlllHG~~~---~~~~~~~~~~~L~--~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 236 (451)
||++||.+- +......+...|+ .++.|+.+|+|=.... +.+
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~p~~-----~~p----------------------------- 46 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLAPEA-----PFP----------------------------- 46 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---TTTS-----STT-----------------------------
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeeccccccc-----ccc-----------------------------
Confidence 799999753 3344455566654 4899999999943221 110
Q ss_pred cCHHHHHHHHHHHHHH-----hCCCCEEEEEeCcchHHHHHHHHhCCC----ccceEEEeccC
Q 013006 237 YSVDLWQDQVCYFIKE-----VIREPVYVVGNSLGGFVAVYFAACNPH----LVKGVTLLNAT 290 (451)
Q Consensus 237 ~s~~~~a~dv~~ll~~-----l~~~~v~lvGhS~GG~val~~A~~~P~----~v~~lvl~~~~ 290 (451)
-.++|..+.+..+++. .+.++++|+|+|-||.+++.++.+..+ .++++++++|.
T Consensus 47 ~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~ 109 (211)
T PF07859_consen 47 AALEDVKAAYRWLLKNADKLGIDPERIVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPW 109 (211)
T ss_dssp HHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCH
T ss_pred ccccccccceeeeccccccccccccceEEeecccccchhhhhhhhhhhhcccchhhhhccccc
Confidence 3455555555555655 345789999999999999999885433 48999999984
No 117
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=98.89 E-value=1.5e-07 Score=77.87 Aligned_cols=105 Identities=17% Similarity=0.194 Sum_probs=74.3
Q ss_pred CCcEEEecCCCCChh--cHHHHHHhhc-CCceEEEEcCCCCCCCCCC-CCCCCCCCCCCchhhhhccccCCCCCCccccc
Q 013006 159 SPPVLFLPGFGVGSF--HYEKQLKDLG-KDYRAWAIDFLGQGMSLPD-EDPTPRSKEGDSTEEKNFLWGFGDKAQPWASE 234 (451)
Q Consensus 159 ~p~VlllHG~~~~~~--~~~~~~~~L~-~~~~Vi~~D~rG~G~S~~~-~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 234 (451)
.-+||+-||.+.+.+ ........|+ +++.|..++++-.-...-. ..|.+.+.
T Consensus 14 ~~tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~------------------------ 69 (213)
T COG3571 14 PVTILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGSG------------------------ 69 (213)
T ss_pred CEEEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCccc------------------------
Confidence 347888899987654 4677778885 5799999998865332211 11111110
Q ss_pred cccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEecc
Q 013006 235 LAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNA 289 (451)
Q Consensus 235 ~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~ 289 (451)
--...+...+.++.+.+...+.++-|+||||-++-..|....-.|.++++++-
T Consensus 70 --t~~~~~~~~~aql~~~l~~gpLi~GGkSmGGR~aSmvade~~A~i~~L~clgY 122 (213)
T COG3571 70 --TLNPEYIVAIAQLRAGLAEGPLIIGGKSMGGRVASMVADELQAPIDGLVCLGY 122 (213)
T ss_pred --cCCHHHHHHHHHHHhcccCCceeeccccccchHHHHHHHhhcCCcceEEEecC
Confidence 23356777777888888778999999999999998888765555999999974
No 118
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=98.86 E-value=9.5e-08 Score=90.45 Aligned_cols=238 Identities=16% Similarity=0.161 Sum_probs=124.6
Q ss_pred CCCcEEEecCCCCChhcHHH-H-HHhh-cCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccc
Q 013006 158 NSPPVLFLPGFGVGSFHYEK-Q-LKDL-GKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASE 234 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~~~~-~-~~~L-~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 234 (451)
.+|.+|.++|.|...+..+. + +..| .+|+.-+.+..|-||...+...... .
T Consensus 91 ~rp~~IhLagTGDh~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s--------------------------~ 144 (348)
T PF09752_consen 91 YRPVCIHLAGTGDHGFWRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRS--------------------------S 144 (348)
T ss_pred CCceEEEecCCCccchhhhhhhhhhHHHHcCcceEEEecccccccChhHhhcc--------------------------c
Confidence 57889999998875544433 3 3444 5689999999999998764432110 0
Q ss_pred cccCHHHH-------HH---HHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCchH
Q 013006 235 LAYSVDLW-------QD---QVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPK 304 (451)
Q Consensus 235 ~~~s~~~~-------a~---dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~ 304 (451)
..++.|+ +. .+..++++.+..++.+.|.||||.+|...|+.+|..|..+-++++..--..+.. ..
T Consensus 145 -l~~VsDl~~~g~~~i~E~~~Ll~Wl~~~G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~sAs~vFt~----Gv 219 (348)
T PF09752_consen 145 -LRNVSDLFVMGRATILESRALLHWLEREGYGPLGLTGISMGGHMAALAASNWPRPVALVPCLSWSSASVVFTE----GV 219 (348)
T ss_pred -ccchhHHHHHHhHHHHHHHHHHHHHHhcCCCceEEEEechhHhhHHhhhhcCCCceeEEEeecccCCCcchhh----hh
Confidence 0122222 22 233344445788999999999999999999999988887777776421111111 11
Q ss_pred HhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCCCCC
Q 013006 305 LARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNL 384 (451)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (451)
+.....|. .+...+ .+. ...+..... ...... ......-...............+.... ..
T Consensus 220 ls~~i~W~----------~L~~q~----~~~-~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~Ea~~~m~~~md~~T-~l 280 (348)
T PF09752_consen 220 LSNSINWD----------ALEKQF----EDT-VYEEEISDI-PAQNKS--LPLDSMEERRRDREALRFMRGVMDSFT-HL 280 (348)
T ss_pred hhcCCCHH----------HHHHHh----ccc-chhhhhccc-ccCccc--ccchhhccccchHHHHHHHHHHHHhhc-cc
Confidence 11111111 010000 000 000000000 000000 000000000000111111111110000 00
Q ss_pred chhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCC-ccccChHHHHhhh
Q 013006 385 SFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHC-PHDEVPEVCSLCL 450 (451)
Q Consensus 385 ~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~-~~~e~p~~v~~~I 450 (451)
.... ...-.-.+.++.+++|.+||......+.+..|++++.++++ ||. .++-+.+.|.++|
T Consensus 281 --~nf~--~P~dp~~ii~V~A~~DaYVPr~~v~~Lq~~WPGsEvR~l~g-GHVsA~L~~q~~fR~AI 342 (348)
T PF09752_consen 281 --TNFP--VPVDPSAIIFVAAKNDAYVPRHGVLSLQEIWPGSEVRYLPG-GHVSAYLLHQEAFRQAI 342 (348)
T ss_pred --cccC--CCCCCCcEEEEEecCceEechhhcchHHHhCCCCeEEEecC-CcEEEeeechHHHHHHH
Confidence 0000 01123457899999999999998899999999999999976 996 5566677777766
No 119
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=98.86 E-value=5.2e-08 Score=104.09 Aligned_cols=78 Identities=13% Similarity=-0.026 Sum_probs=58.5
Q ss_pred hcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhC-------
Q 013006 182 LGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVI------- 254 (451)
Q Consensus 182 L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~------- 254 (451)
+.+||.|+..|.||.|.|+..... +. .+-.+|..++|+-+.
T Consensus 276 ~~rGYaVV~~D~RGtg~SeG~~~~-------------------------------~~-~~E~~D~~~vIeWl~~~~~~~~ 323 (767)
T PRK05371 276 LPRGFAVVYVSGIGTRGSDGCPTT-------------------------------GD-YQEIESMKAVIDWLNGRATAYT 323 (767)
T ss_pred HhCCeEEEEEcCCCCCCCCCcCcc-------------------------------CC-HHHHHHHHHHHHHHhhCCcccc
Confidence 366999999999999999753221 11 223344444444443
Q ss_pred -------------CCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCC
Q 013006 255 -------------REPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATP 291 (451)
Q Consensus 255 -------------~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~ 291 (451)
-.+|.++|.|+||++++.+|...|..++++|..++..
T Consensus 324 d~~~~~~~kq~WsnGkVGm~G~SY~G~~~~~aAa~~pp~LkAIVp~a~is 373 (767)
T PRK05371 324 DRTRGKEVKADWSNGKVAMTGKSYLGTLPNAVATTGVEGLETIIPEAAIS 373 (767)
T ss_pred ccccccccccCCCCCeeEEEEEcHHHHHHHHHHhhCCCcceEEEeeCCCC
Confidence 3589999999999999999999999999999988754
No 120
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.85 E-value=5.7e-08 Score=88.95 Aligned_cols=102 Identities=25% Similarity=0.258 Sum_probs=71.2
Q ss_pred CCCcEEEecCCCCChhcHHHHHHhhcC-CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccc
Q 013006 158 NSPPVLFLPGFGVGSFHYEKQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELA 236 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~~~~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 236 (451)
.=|+|||+||+......|..++.+++. ||-|+++|+...+....... .
T Consensus 16 ~yPVv~f~~G~~~~~s~Ys~ll~hvAShGyIVV~~d~~~~~~~~~~~~-------------------------------~ 64 (259)
T PF12740_consen 16 TYPVVLFLHGFLLINSWYSQLLEHVASHGYIVVAPDLYSIGGPDDTDE-------------------------------V 64 (259)
T ss_pred CcCEEEEeCCcCCCHHHHHHHHHHHHhCceEEEEecccccCCCCcchh-------------------------------H
Confidence 358999999999888889999999976 79999999766433210000 0
Q ss_pred cCHHHHHHHHHH-HHHHh------CCCCEEEEEeCcchHHHHHHHHhC-----CCccceEEEeccC
Q 013006 237 YSVDLWQDQVCY-FIKEV------IREPVYVVGNSLGGFVAVYFAACN-----PHLVKGVTLLNAT 290 (451)
Q Consensus 237 ~s~~~~a~dv~~-ll~~l------~~~~v~lvGhS~GG~val~~A~~~-----P~~v~~lvl~~~~ 290 (451)
....++++.+.+ +-..+ +..++.|.|||-||-+|+.++..+ +.+++++++++|.
T Consensus 65 ~~~~~vi~Wl~~~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPV 130 (259)
T PF12740_consen 65 ASAAEVIDWLAKGLESKLPLGVKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPV 130 (259)
T ss_pred HHHHHHHHHHHhcchhhccccccccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEeccc
Confidence 112222222111 11111 346899999999999999999987 5689999999996
No 121
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=98.75 E-value=6.1e-07 Score=78.85 Aligned_cols=49 Identities=20% Similarity=0.261 Sum_probs=42.6
Q ss_pred cCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccCh
Q 013006 394 QMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEVP 443 (451)
Q Consensus 394 ~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~p 443 (451)
+.+++|.|-|.|+.|.+++...+..|++.++++.++..+ +||++.-..+
T Consensus 160 ~~i~~PSLHi~G~~D~iv~~~~s~~L~~~~~~a~vl~Hp-ggH~VP~~~~ 208 (230)
T KOG2551|consen 160 RPLSTPSLHIFGETDTIVPSERSEQLAESFKDATVLEHP-GGHIVPNKAK 208 (230)
T ss_pred cCCCCCeeEEecccceeecchHHHHHHHhcCCCeEEecC-CCccCCCchH
Confidence 457999999999999999999999999999999766665 6999876654
No 122
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.74 E-value=1.1e-07 Score=87.57 Aligned_cols=100 Identities=27% Similarity=0.269 Sum_probs=86.5
Q ss_pred CcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccccCH
Q 013006 160 PPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSV 239 (451)
Q Consensus 160 p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~ 239 (451)
|||+++|+.++....|..+...|.....|+..+.||.|.-.... .++
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~l~~~~~v~~l~a~g~~~~~~~~---------------------------------~~l 47 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAALGPLLPVYGLQAPGYGAGEQPF---------------------------------ASL 47 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHhccCceeeccccCccccccccc---------------------------------CCH
Confidence 58999999999999999999999988999999999998643221 589
Q ss_pred HHHHHHHHHHHHHhCC-CCEEEEEeCcchHHHHHHHHhC---CCccceEEEeccCCC
Q 013006 240 DLWQDQVCYFIKEVIR-EPVYVVGNSLGGFVAVYFAACN---PHLVKGVTLLNATPF 292 (451)
Q Consensus 240 ~~~a~dv~~ll~~l~~-~~v~lvGhS~GG~val~~A~~~---P~~v~~lvl~~~~~~ 292 (451)
+++++...+-|..+.. .+++|+|||+||.+|+..|.+. .+-|..++++++.+.
T Consensus 48 ~~~a~~yv~~Ir~~QP~GPy~L~G~S~GG~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 48 DDMAAAYVAAIRRVQPEGPYVLLGWSLGGAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEeeccccHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 9999998888887754 6999999999999999999863 457999999998753
No 123
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=98.70 E-value=9.6e-08 Score=82.73 Aligned_cols=96 Identities=20% Similarity=0.161 Sum_probs=73.1
Q ss_pred CcEEEecCCCCChhcHHHHHHhhc-CCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccccC
Q 013006 160 PPVLFLPGFGVGSFHYEKQLKDLG-KDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYS 238 (451)
Q Consensus 160 p~VlllHG~~~~~~~~~~~~~~L~-~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s 238 (451)
..+||+-|=++-...=..+...|+ +|+.|+.+|-+-|=.+. .|
T Consensus 3 t~~v~~SGDgGw~~~d~~~a~~l~~~G~~VvGvdsl~Yfw~~------------------------------------rt 46 (192)
T PF06057_consen 3 TLAVFFSGDGGWRDLDKQIAEALAKQGVPVVGVDSLRYFWSE------------------------------------RT 46 (192)
T ss_pred EEEEEEeCCCCchhhhHHHHHHHHHCCCeEEEechHHHHhhh------------------------------------CC
Confidence 357777886665433345667785 58999999987665553 46
Q ss_pred HHHHHHHHHHHHHHh----CCCCEEEEEeCcchHHHHHHHHhCC----CccceEEEeccCC
Q 013006 239 VDLWQDQVCYFIKEV----IREPVYVVGNSLGGFVAVYFAACNP----HLVKGVTLLNATP 291 (451)
Q Consensus 239 ~~~~a~dv~~ll~~l----~~~~v~lvGhS~GG~val~~A~~~P----~~v~~lvl~~~~~ 291 (451)
.++.+.|+..++++. +.++++|||+|+|+-+.-....+.| ++|+.++|+++..
T Consensus 47 P~~~a~Dl~~~i~~y~~~w~~~~vvLiGYSFGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~ 107 (192)
T PF06057_consen 47 PEQTAADLARIIRHYRARWGRKRVVLIGYSFGADVLPFIYNRLPAALRARVAQVVLLSPST 107 (192)
T ss_pred HHHHHHHHHHHHHHHHHHhCCceEEEEeecCCchhHHHHHhhCCHHHHhheeEEEEeccCC
Confidence 777777777777665 6789999999999988888887776 4799999999864
No 124
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=98.66 E-value=2e-07 Score=80.42 Aligned_cols=192 Identities=14% Similarity=0.071 Sum_probs=114.0
Q ss_pred EEEEeecCCCCCCCCcEEEecCCC---CC-hhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhcc
Q 013006 146 NVHYEKAGCENVNSPPVLFLPGFG---VG-SFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFL 221 (451)
Q Consensus 146 ~l~y~~~g~~~~~~p~VlllHG~~---~~-~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~ 221 (451)
+-....||+.+ ..+..+|+||.- ++ .......-..+.++|+|..++ ++.+.....
T Consensus 55 ~q~VDIwg~~~-~~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasvg---Y~l~~q~ht----------------- 113 (270)
T KOG4627|consen 55 RQLVDIWGSTN-QAKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASVG---YNLCPQVHT----------------- 113 (270)
T ss_pred ceEEEEecCCC-CccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEec---cCcCccccc-----------------
Confidence 33445566643 568999999952 22 222233334556789998875 455532110
Q ss_pred ccCCCCCCccccccccCHHHHHHHHHHHHHHhCC-CCEEEEEeCcchHHHHHHHHh-CCCccceEEEeccCCCCCCCCCC
Q 013006 222 WGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIR-EPVYVVGNSLGGFVAVYFAAC-NPHLVKGVTLLNATPFWGFSPNP 299 (451)
Q Consensus 222 w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~-~~v~lvGhS~GG~val~~A~~-~P~~v~~lvl~~~~~~~~~~~~~ 299 (451)
+..++.+...-+.-+++...- +.+.+-|||.|+.+|+.+..+ +..+|.++++.++.-
T Consensus 114 -------------L~qt~~~~~~gv~filk~~~n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY-------- 172 (270)
T KOG4627|consen 114 -------------LEQTMTQFTHGVNFILKYTENTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVY-------- 172 (270)
T ss_pred -------------HHHHHHHHHHHHHHHHHhcccceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHh--------
Confidence 012444444445555555543 557778999999999887765 444899999888641
Q ss_pred CCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhc
Q 013006 300 IRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFA 379 (451)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (451)
.++.+.. .-+...-....+.
T Consensus 173 --------------------~l~EL~~-----------------te~g~dlgLt~~~----------------------- 192 (270)
T KOG4627|consen 173 --------------------DLRELSN-----------------TESGNDLGLTERN----------------------- 192 (270)
T ss_pred --------------------hHHHHhC-----------------CccccccCcccch-----------------------
Confidence 0111100 0000000000000
Q ss_pred CCCCCchhHHhhhccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccccC
Q 013006 380 PQGNLSFREALSRCQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDEV 442 (451)
Q Consensus 380 ~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e~ 442 (451)
.......+..+..+++|+|++.|++|.---.+..+.++.++..+.+..+++.+|+-.++.
T Consensus 193 ---ae~~Scdl~~~~~v~~~ilVv~~~~espklieQnrdf~~q~~~a~~~~f~n~~hy~I~~~ 252 (270)
T KOG4627|consen 193 ---AESVSCDLWEYTDVTVWILVVAAEHESPKLIEQNRDFADQLRKASFTLFKNYDHYDIIEE 252 (270)
T ss_pred ---hhhcCccHHHhcCceeeeeEeeecccCcHHHHhhhhHHHHhhhcceeecCCcchhhHHHH
Confidence 000112233456789999999999997666678888899888899999999999866653
No 125
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=98.65 E-value=3.7e-06 Score=82.80 Aligned_cols=98 Identities=23% Similarity=0.397 Sum_probs=69.5
Q ss_pred CCCCcEEEe-----cCCCCChhcHHHH-HHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCc
Q 013006 157 VNSPPVLFL-----PGFGVGSFHYEKQ-LKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQP 230 (451)
Q Consensus 157 ~~~p~Vlll-----HG~~~~~~~~~~~-~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~ 230 (451)
+.++|+|.+ ||-|-..+.-+.. --.|..|+.|+.+.+.= . +.+
T Consensus 66 ~~krP~vViDPRAGHGpGIGGFK~dSevG~AL~~GHPvYFV~F~p----~--P~p------------------------- 114 (581)
T PF11339_consen 66 PTKRPFVVIDPRAGHGPGIGGFKPDSEVGVALRAGHPVYFVGFFP----E--PEP------------------------- 114 (581)
T ss_pred CCCCCeEEeCCCCCCCCCccCCCcccHHHHHHHcCCCeEEEEecC----C--CCC-------------------------
Confidence 345666666 5544333333433 35577788888877641 1 111
Q ss_pred cccccccCHHHHHHHHHHHHHHhC-----CCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccC
Q 013006 231 WASELAYSVDLWQDQVCYFIKEVI-----REPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNAT 290 (451)
Q Consensus 231 ~~~~~~~s~~~~a~dv~~ll~~l~-----~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~ 290 (451)
..|+++.+.....|++++. ..+.+|||.+.||..++.+|+.+|+++.-+|+-+++
T Consensus 115 -----gQTl~DV~~ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~Pd~~gplvlaGaP 174 (581)
T PF11339_consen 115 -----GQTLEDVMRAEAAFVEEVAERHPDAPKPNLIGNCQGGWAAMMLAALRPDLVGPLVLAGAP 174 (581)
T ss_pred -----CCcHHHHHHHHHHHHHHHHHhCCCCCCceEEeccHHHHHHHHHHhcCcCccCceeecCCC
Confidence 1588988888888887762 248999999999999999999999999888887764
No 126
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=98.63 E-value=1.8e-07 Score=92.08 Aligned_cols=132 Identities=17% Similarity=0.136 Sum_probs=60.3
Q ss_pred CCCcEEEecCCCCChhcHHHHHHhhc-CCceEEEEcCCCCCCCC-CC-CCCCCCCCCCCchhhhhcccc-CCCCCC-ccc
Q 013006 158 NSPPVLFLPGFGVGSFHYEKQLKDLG-KDYRAWAIDFLGQGMSL-PD-EDPTPRSKEGDSTEEKNFLWG-FGDKAQ-PWA 232 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~~~~~~~~L~-~~~~Vi~~D~rG~G~S~-~~-~~~~~~~~~~~~~~~~~~~w~-~~~~~~-~~~ 232 (451)
+-|+|||.||++++...|..+...|+ .||-|+++|.|..-.+. .. .+...........+..+..|- +.+... ...
T Consensus 99 ~~PvvIFSHGlgg~R~~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (379)
T PF03403_consen 99 KFPVVIFSHGLGGSRTSYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPEEEF 178 (379)
T ss_dssp -EEEEEEE--TT--TTTTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GGGHH
T ss_pred CCCEEEEeCCCCcchhhHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccchhHH
Confidence 35899999999999999999999995 57999999999542221 00 000000000000000000010 110000 000
Q ss_pred cccccCHHHHHHHHHHHHHHh--------------------------CCCCEEEEEeCcchHHHHHHHHhCCCccceEEE
Q 013006 233 SELAYSVDLWQDQVCYFIKEV--------------------------IREPVYVVGNSLGGFVAVYFAACNPHLVKGVTL 286 (451)
Q Consensus 233 ~~~~~s~~~~a~dv~~ll~~l--------------------------~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl 286 (451)
+.....++.-++++..+++.+ +.+++.++|||+||.+++..+.+. .++++.|+
T Consensus 179 ~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d-~r~~~~I~ 257 (379)
T PF03403_consen 179 ELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD-TRFKAGIL 257 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH--TT--EEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc-cCcceEEE
Confidence 000011222223333333222 234699999999999999888876 58999999
Q ss_pred eccC
Q 013006 287 LNAT 290 (451)
Q Consensus 287 ~~~~ 290 (451)
+++.
T Consensus 258 LD~W 261 (379)
T PF03403_consen 258 LDPW 261 (379)
T ss_dssp ES--
T ss_pred eCCc
Confidence 9973
No 127
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.63 E-value=1.2e-07 Score=94.52 Aligned_cols=92 Identities=15% Similarity=0.205 Sum_probs=69.6
Q ss_pred CChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHH
Q 013006 170 VGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYF 249 (451)
Q Consensus 170 ~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~l 249 (451)
.....|..+++.|.+...+...|++|+|.+-+.... ....++++.+.+.++
T Consensus 105 ~~~~~~~~li~~L~~~GY~~~~dL~g~gYDwR~~~~-----------------------------~~~~~~~Lk~lIe~~ 155 (440)
T PLN02733 105 DEVYYFHDMIEQLIKWGYKEGKTLFGFGYDFRQSNR-----------------------------LPETMDGLKKKLETV 155 (440)
T ss_pred chHHHHHHHHHHHHHcCCccCCCcccCCCCcccccc-----------------------------HHHHHHHHHHHHHHH
Confidence 456889999999976444558999999998653210 012345566666666
Q ss_pred HHHhCCCCEEEEEeCcchHHHHHHHHhCCC----ccceEEEeccC
Q 013006 250 IKEVIREPVYVVGNSLGGFVAVYFAACNPH----LVKGVTLLNAT 290 (451)
Q Consensus 250 l~~l~~~~v~lvGhS~GG~val~~A~~~P~----~v~~lvl~~~~ 290 (451)
.++.+.++++||||||||.+++.++..+|+ .|+++|.++++
T Consensus 156 ~~~~g~~kV~LVGHSMGGlva~~fl~~~p~~~~k~I~~~I~la~P 200 (440)
T PLN02733 156 YKASGGKKVNIISHSMGGLLVKCFMSLHSDVFEKYVNSWIAIAAP 200 (440)
T ss_pred HHHcCCCCEEEEEECHhHHHHHHHHHHCCHhHHhHhccEEEECCC
Confidence 666778999999999999999999999886 47899999763
No 128
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=98.60 E-value=2.7e-06 Score=81.64 Aligned_cols=120 Identities=20% Similarity=0.218 Sum_probs=82.8
Q ss_pred ceeeecCCeEEEEeecCCC--C--CCCCcEEEecCCCC-----ChhcHHHHHHhhcC--CceEEEEcCCCCCCCCCCCCC
Q 013006 137 CFWEWKPKFNVHYEKAGCE--N--VNSPPVLFLPGFGV-----GSFHYEKQLKDLGK--DYRAWAIDFLGQGMSLPDEDP 205 (451)
Q Consensus 137 ~~~~~~~g~~l~y~~~g~~--~--~~~p~VlllHG~~~-----~~~~~~~~~~~L~~--~~~Vi~~D~rG~G~S~~~~~~ 205 (451)
..++..+...+..+.+-|. . ...|.|||+||.|. ....|+.+...++. +.-|+.+|+|= .|+.+
T Consensus 64 ~dv~~~~~~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRL-----APEh~ 138 (336)
T KOG1515|consen 64 KDVTIDPFTNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRL-----APEHP 138 (336)
T ss_pred eeeEecCCCCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCccc-----CCCCC
Confidence 3334444444444444432 1 35689999999763 24568888888854 68889999983 33444
Q ss_pred CCCCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHH------hCCCCEEEEEeCcchHHHHHHHHhC--
Q 013006 206 TPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKE------VIREPVYVVGNSLGGFVAVYFAACN-- 277 (451)
Q Consensus 206 ~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~------l~~~~v~lvGhS~GG~val~~A~~~-- 277 (451)
.| ..++|-.+.+..++++ .+.+++.|+|=|-||.+|..+|.+.
T Consensus 139 ~P-----------------------------a~y~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~ 189 (336)
T KOG1515|consen 139 FP-----------------------------AAYDDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAAD 189 (336)
T ss_pred CC-----------------------------ccchHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhh
Confidence 33 4667777777777765 2457899999999999999888752
Q ss_pred ----CCccceEEEeccC
Q 013006 278 ----PHLVKGVTLLNAT 290 (451)
Q Consensus 278 ----P~~v~~lvl~~~~ 290 (451)
+-++++.|++-|.
T Consensus 190 ~~~~~~ki~g~ili~P~ 206 (336)
T KOG1515|consen 190 EKLSKPKIKGQILIYPF 206 (336)
T ss_pred ccCCCcceEEEEEEecc
Confidence 3579999999985
No 129
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=98.60 E-value=3.7e-06 Score=81.19 Aligned_cols=100 Identities=19% Similarity=0.219 Sum_probs=69.8
Q ss_pred CCCcEEEecCCC---CChhcHHHHHHhh--cCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccc
Q 013006 158 NSPPVLFLPGFG---VGSFHYEKQLKDL--GKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWA 232 (451)
Q Consensus 158 ~~p~VlllHG~~---~~~~~~~~~~~~L--~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~ 232 (451)
..|+||++||.+ ++....+.++..+ ..++.|+.+|+|=.-+- +.+
T Consensus 78 ~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~-----~~p------------------------- 127 (312)
T COG0657 78 TAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPEH-----PFP------------------------- 127 (312)
T ss_pred CCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCCC-----CCC-------------------------
Confidence 479999999975 3344444555554 45899999999854332 111
Q ss_pred cccccCHHHHHHHHHHHHHH---hC--CCCEEEEEeCcchHHHHHHHHhCCC----ccceEEEeccCC
Q 013006 233 SELAYSVDLWQDQVCYFIKE---VI--REPVYVVGNSLGGFVAVYFAACNPH----LVKGVTLLNATP 291 (451)
Q Consensus 233 ~~~~~s~~~~a~dv~~ll~~---l~--~~~v~lvGhS~GG~val~~A~~~P~----~v~~lvl~~~~~ 291 (451)
..+++..+.+..+.++ ++ .+++.++|+|-||.+++.++..-.+ ...+.+++.|..
T Consensus 128 ----~~~~d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~ 191 (312)
T COG0657 128 ----AALEDAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLL 191 (312)
T ss_pred ----chHHHHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEeccc
Confidence 3566655556555554 33 4789999999999999998876443 578888988853
No 130
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=98.59 E-value=1.1e-06 Score=81.26 Aligned_cols=118 Identities=15% Similarity=0.264 Sum_probs=68.8
Q ss_pred CCCcEEEecCCCCChhcHHHHHHhhc-C-C--ceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhh--ccccCCCCCCcc
Q 013006 158 NSPPVLFLPGFGVGSFHYEKQLKDLG-K-D--YRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKN--FLWGFGDKAQPW 231 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~~~~~~~~L~-~-~--~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~--~~w~~~~~~~~~ 231 (451)
...|.||+||++++...+..++..+. + + ..++.++---.|.-.-...... ...+ ..-.|++...
T Consensus 10 ~~tPTifihG~~gt~~s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~--------~~~nPiIqV~F~~n~~-- 79 (255)
T PF06028_consen 10 STTPTIFIHGYGGTANSFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSK--------NAKNPIIQVNFEDNRN-- 79 (255)
T ss_dssp S-EEEEEE--TTGGCCCCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---T--------T-SS-EEEEEESSTT---
T ss_pred CCCcEEEECCCCCChhHHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCC--------CCCCCEEEEEecCCCc--
Confidence 35689999999999999999999996 4 2 4454443322222110000000 0000 1122222110
Q ss_pred ccccccCHHHHHHHHHHHHHHh----CCCCEEEEEeCcchHHHHHHHHhCCC-----ccceEEEeccC
Q 013006 232 ASELAYSVDLWQDQVCYFIKEV----IREPVYVVGNSLGGFVAVYFAACNPH-----LVKGVTLLNAT 290 (451)
Q Consensus 232 ~~~~~~s~~~~a~dv~~ll~~l----~~~~v~lvGhS~GG~val~~A~~~P~-----~v~~lvl~~~~ 290 (451)
-+....+..+..++..| +++++.+|||||||..++.++..+.. .+.++|.++++
T Consensus 80 -----~~~~~qa~wl~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~p 142 (255)
T PF06028_consen 80 -----ANYKKQAKWLKKVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGP 142 (255)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--
T ss_pred -----CCHHHHHHHHHHHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccc
Confidence 25666777777777665 67899999999999999999887532 58999999973
No 131
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=98.58 E-value=1.5e-07 Score=89.48 Aligned_cols=221 Identities=18% Similarity=0.150 Sum_probs=118.6
Q ss_pred CCCcEEEecCCCCChhcHHHHHHhhcC-CceEEEEcCCC--CCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccc
Q 013006 158 NSPPVLFLPGFGVGSFHYEKQLKDLGK-DYRAWAIDFLG--QGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASE 234 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~~~~~~~~L~~-~~~Vi~~D~rG--~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 234 (451)
.-|.|||.||.+.....+..+.+.|+. +|-|.++|.+| .|........... -....+|+-
T Consensus 70 ~~PlvvlshG~Gs~~~~f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~-------~~p~~~~er---------- 132 (365)
T COG4188 70 LLPLVVLSHGSGSYVTGFAWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGS-------YAPAEWWER---------- 132 (365)
T ss_pred cCCeEEecCCCCCCccchhhhHHHHhhCceEEEeccCCCcccccCChhhcCCcc-------cchhhhhcc----------
Confidence 458899999999999999999999966 79999999999 3443322111000 011123322
Q ss_pred cccCHHHHHHHHHHH------HHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCchHHhhh
Q 013006 235 LAYSVDLWQDQVCYF------IKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARI 308 (451)
Q Consensus 235 ~~~s~~~~a~dv~~l------l~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 308 (451)
..++..+.+.+.+. -.++...+|.++|||+||..++.++..+.+......-|.... ......+....+....
T Consensus 133 -p~dis~lLd~L~~~~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~~~~~~~~C~~~~-~~~~~~~~~~~~~l~q 210 (365)
T COG4188 133 -PLDISALLDALLQLTASPALAGRLDPQRVGVLGHSFGGYTAMELAGAELDAEALLQHCESAS-RICLDPPGLNGRLLNQ 210 (365)
T ss_pred -cccHHHHHHHHHHhhcCcccccccCccceEEEecccccHHHHHhccccccHHHHHHHhhhhh-hcccCCCCcChhhhcc
Confidence 13444444444433 122345689999999999999999887655322222222100 0000000000000000
Q ss_pred cCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCCCCCchhH
Q 013006 309 LPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSFRE 388 (451)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (451)
. ....++ .. ....+++.....+. ..+.....+.
T Consensus 211 ~---~av~~~------------------------~~----------------~~~~rDpriravvA---~~p~~~~~Fg- 243 (365)
T COG4188 211 C---AAVWLP------------------------RQ----------------AYDLRDPRIRAVVA---INPALGMIFG- 243 (365)
T ss_pred c---cccccc------------------------hh----------------hhccccccceeeee---ccCCcccccc-
Confidence 0 000000 00 00000000000000 0000011111
Q ss_pred HhhhccCCCCCEEEEeeCCCCCCChH-HHHHHHHHCCCC--cEEEeCCCCCCccccChHH
Q 013006 389 ALSRCQMNGVPICLIYGKEDPWVKPV-WGLQVKRQVPEA--PYYEISPAGHCPHDEVPEV 445 (451)
Q Consensus 389 ~~~~l~~i~~PvLii~G~~D~~v~~~-~~~~l~~~lp~~--~~~~i~~~gH~~~~e~p~~ 445 (451)
...+.++++|++++.|..|...|+. ........+++. -+.+++++.|+-++|-+++
T Consensus 244 -~tgl~~v~~P~~~~a~s~D~~aP~~~~~~~~f~~l~g~~k~~~~vp~a~h~sfl~~~~~ 302 (365)
T COG4188 244 -TTGLVKVTDPVLLAAGSADGFAPPVTEQIRPFGYLPGALKYLRLVPGATHFSFLELCKE 302 (365)
T ss_pred -cccceeeecceeeecccccccCCcccccccccccCCcchhheeecCCCccccccccCcc
Confidence 3446788999999999999987765 334566677876 5778999999999887766
No 132
>COG4099 Predicted peptidase [General function prediction only]
Probab=98.57 E-value=9.4e-07 Score=80.61 Aligned_cols=132 Identities=20% Similarity=0.182 Sum_probs=78.9
Q ss_pred cceeeecCCeEEEEeecCCC----CCCC-CcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCC-CCCCCCCCCCCC
Q 013006 136 SCFWEWKPKFNVHYEKAGCE----NVNS-PPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQG-MSLPDEDPTPRS 209 (451)
Q Consensus 136 ~~~~~~~~g~~l~y~~~g~~----~~~~-p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G-~S~~~~~~~~~~ 209 (451)
..+|..+-|.+|.|+.+-|. +++- |.|||+||.+.....-+.. |..+.--++.+.+-.+ .--. +..
T Consensus 163 ~~f~d~~tgneLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~dn~~~---l~sg~gaiawa~pedqcfVlA-PQy---- 234 (387)
T COG4099 163 VEFYDESTGNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSDNDKV---LSSGIGAIAWAGPEDQCFVLA-PQY---- 234 (387)
T ss_pred eEeeccccCceeeEEEecccccCCCCccccEEEEEecCCCCCchhhhh---hhcCccceeeecccCceEEEc-ccc----
Confidence 45666788999999988873 2334 8999999998776554332 2233333444444333 0000 000
Q ss_pred CCCCchhhhhccccCCCCCCccccccccCHHHHHHHHH-HHHHHhCC--CCEEEEEeCcchHHHHHHHHhCCCccceEEE
Q 013006 210 KEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVC-YFIKEVIR--EPVYVVGNSLGGFVAVYFAACNPHLVKGVTL 286 (451)
Q Consensus 210 ~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~-~ll~~l~~--~~v~lvGhS~GG~val~~A~~~P~~v~~lvl 286 (451)
+..|-.++..+ ..-....++.+. .+.++.++ .+++++|.|+||+-++.++.++|+.+++.++
T Consensus 235 --------~~if~d~e~~t-------~~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~ 299 (387)
T COG4099 235 --------NPIFADSEEKT-------LLYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVP 299 (387)
T ss_pred --------ccccccccccc-------chhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeee
Confidence 00000000000 012233334444 33445555 5799999999999999999999999999999
Q ss_pred eccC
Q 013006 287 LNAT 290 (451)
Q Consensus 287 ~~~~ 290 (451)
+++.
T Consensus 300 iaG~ 303 (387)
T COG4099 300 IAGG 303 (387)
T ss_pred ecCC
Confidence 9974
No 133
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=98.56 E-value=9.1e-07 Score=94.43 Aligned_cols=206 Identities=14% Similarity=0.029 Sum_probs=128.8
Q ss_pred CCeEEEEeecCCCC----CCCCcEEEecCCCCChh-------cHHHHHHhh-cCCceEEEEcCCCCCCCCCCCCCCCCCC
Q 013006 143 PKFNVHYEKAGCEN----VNSPPVLFLPGFGVGSF-------HYEKQLKDL-GKDYRAWAIDFLGQGMSLPDEDPTPRSK 210 (451)
Q Consensus 143 ~g~~l~y~~~g~~~----~~~p~VlllHG~~~~~~-------~~~~~~~~L-~~~~~Vi~~D~rG~G~S~~~~~~~~~~~ 210 (451)
+|...+|...-|++ ++=|.||.+||.+++.. .|..+ .. ..++-|+.+|.||-|.....-..
T Consensus 506 ~~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~--~~s~~g~~v~~vd~RGs~~~G~~~~~----- 578 (755)
T KOG2100|consen 506 DGITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEV--VVSSRGFAVLQVDGRGSGGYGWDFRS----- 578 (755)
T ss_pred ccEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeEEecHHHH--hhccCCeEEEEEcCCCcCCcchhHHH-----
Confidence 78899888877642 22367777899886322 24333 22 45799999999998876432110
Q ss_pred CCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCC--CCEEEEEeCcchHHHHHHHHhCCCccceE-EEe
Q 013006 211 EGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIR--EPVYVVGNSLGGFVAVYFAACNPHLVKGV-TLL 287 (451)
Q Consensus 211 ~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~--~~v~lvGhS~GG~val~~A~~~P~~v~~l-vl~ 287 (451)
.-...| ....++|+...++.+++..-+ +++.|.|+|.||++++.++...|+.+.+. +.+
T Consensus 579 ------~~~~~l------------G~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvav 640 (755)
T KOG2100|consen 579 ------ALPRNL------------GDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAV 640 (755)
T ss_pred ------Hhhhhc------------CCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEe
Confidence 111112 226788888888888887643 67999999999999999999998555544 999
Q ss_pred ccCCCCCCCCCCCCchHHhhhcCCCCCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccCh
Q 013006 288 NATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHP 367 (451)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (451)
+|...|. ........ ++ +......... + .+
T Consensus 641 aPVtd~~-~yds~~te------------------------------------ry----mg~p~~~~~~-y---~e----- 670 (755)
T KOG2100|consen 641 APVTDWL-YYDSTYTE------------------------------------RY----MGLPSENDKG-Y---EE----- 670 (755)
T ss_pred cceeeee-eecccccH------------------------------------hh----cCCCccccch-h---hh-----
Confidence 9875433 11100000 00 0000000000 0 00
Q ss_pred hHHHHHHHHHhcCCCCCchhHHhhhccCCCCCE-EEEeeCCCCCCChHHHHHHHHHCCC----CcEEEeCCCCCCccccC
Q 013006 368 AAAASFASIMFAPQGNLSFREALSRCQMNGVPI-CLIYGKEDPWVKPVWGLQVKRQVPE----APYYEISPAGHCPHDEV 442 (451)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pv-Lii~G~~D~~v~~~~~~~l~~~lp~----~~~~~i~~~gH~~~~e~ 442 (451)
......+..++.|. |+|||+.|..|+.+.+.++.+.+.. .++.++|+..|.+-.-.
T Consensus 671 -------------------~~~~~~~~~~~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv~~~~~vypde~H~is~~~ 731 (755)
T KOG2100|consen 671 -------------------SSVSSPANNIKTPKLLLIHGTEDDNVHFQQSAILIKALQNAGVPFRLLVYPDENHGISYVE 731 (755)
T ss_pred -------------------ccccchhhhhccCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCCceEEEEeCCCCccccccc
Confidence 11122233455555 9999999999999988887766532 57889999999876533
No 134
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=98.55 E-value=2.9e-07 Score=88.09 Aligned_cols=137 Identities=21% Similarity=0.101 Sum_probs=67.2
Q ss_pred ecCCeEEEEeecCCCC--CCCCcEEEecCCCCChhcH------------------HHHHHhhcC-CceEEEEcCCCCCCC
Q 013006 141 WKPKFNVHYEKAGCEN--VNSPPVLFLPGFGVGSFHY------------------EKQLKDLGK-DYRAWAIDFLGQGMS 199 (451)
Q Consensus 141 ~~~g~~l~y~~~g~~~--~~~p~VlllHG~~~~~~~~------------------~~~~~~L~~-~~~Vi~~D~rG~G~S 199 (451)
..++.++.....-|++ ...|.||++||-+++.+.. ......|++ ||-|+++|.+|+|..
T Consensus 95 ~~p~~~vpaylLvPd~~~~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYVvla~D~~g~GER 174 (390)
T PF12715_consen 95 TTPGSRVPAYLLVPDGAKGPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYVVLAPDALGFGER 174 (390)
T ss_dssp -STTB-EEEEEEEETT--S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSEEEEE--TTSGGG
T ss_pred ccCCeeEEEEEEecCCCCCCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCCEEEEEcccccccc
Confidence 3455555555443332 3458899999987665331 113455654 799999999999997
Q ss_pred CCCCCCCCCCCCCCchhhhhccccCCCCCCccccccccCHHHH-HHHHHHHHHHh------CCCCEEEEEeCcchHHHHH
Q 013006 200 LPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLW-QDQVCYFIKEV------IREPVYVVGNSLGGFVAVY 272 (451)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~-a~dv~~ll~~l------~~~~v~lvGhS~GG~val~ 272 (451)
........... .++..+ ..+...+..|+..+ +-|....++.| ..++|.++|+||||..++.
T Consensus 175 ~~~e~~~~~~~------~~~~~l------a~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~ 242 (390)
T PF12715_consen 175 GDMEGAAQGSN------YDCQAL------ARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWW 242 (390)
T ss_dssp -SSCCCTTTTS--------HHHH------HHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHH
T ss_pred ccccccccccc------hhHHHH------HHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHH
Confidence 65432211000 000000 00000111122111 11222344444 3468999999999999999
Q ss_pred HHHhCCCccceEEEeccC
Q 013006 273 FAACNPHLVKGVTLLNAT 290 (451)
Q Consensus 273 ~A~~~P~~v~~lvl~~~~ 290 (451)
+|+..+ +|++.|..+..
T Consensus 243 LaALDd-RIka~v~~~~l 259 (390)
T PF12715_consen 243 LAALDD-RIKATVANGYL 259 (390)
T ss_dssp HHHH-T-T--EEEEES-B
T ss_pred HHHcch-hhHhHhhhhhh
Confidence 999874 89888887653
No 135
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=98.52 E-value=5.1e-07 Score=83.80 Aligned_cols=99 Identities=20% Similarity=0.129 Sum_probs=68.2
Q ss_pred CcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccccCH
Q 013006 160 PPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSV 239 (451)
Q Consensus 160 p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~ 239 (451)
..|++.-|..+-.+. --....+.-+|.|+.+++||++.|...+.+. .+.
T Consensus 244 ~LvIC~EGNAGFYEv-G~m~tP~~lgYsvLGwNhPGFagSTG~P~p~------------------------------n~~ 292 (517)
T KOG1553|consen 244 DLVICFEGNAGFYEV-GVMNTPAQLGYSVLGWNHPGFAGSTGLPYPV------------------------------NTL 292 (517)
T ss_pred eEEEEecCCccceEe-eeecChHHhCceeeccCCCCccccCCCCCcc------------------------------cch
Confidence 356666775543221 0112234558999999999999998665442 233
Q ss_pred HHHHHHHHHHHHHhCC--CCEEEEEeCcchHHHHHHHHhCCCccceEEEeccC
Q 013006 240 DLWQDQVCYFIKEVIR--EPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNAT 290 (451)
Q Consensus 240 ~~~a~dv~~ll~~l~~--~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~ 290 (451)
..+-.-+...|+.|+. +.++|.|+|.||+.++.+|..||+ |+++||-++.
T Consensus 293 nA~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YPd-VkavvLDAtF 344 (517)
T KOG1553|consen 293 NAADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPD-VKAVVLDATF 344 (517)
T ss_pred HHHHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcCCC-ceEEEeecch
Confidence 3333333344666764 679999999999999999999996 9999998763
No 136
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=98.52 E-value=9.6e-07 Score=77.11 Aligned_cols=117 Identities=19% Similarity=0.200 Sum_probs=74.9
Q ss_pred CcEEEecCCCCChhcHHHHHHhhc-CCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccccC
Q 013006 160 PPVLFLPGFGVGSFHYEKQLKDLG-KDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYS 238 (451)
Q Consensus 160 p~VlllHG~~~~~~~~~~~~~~L~-~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s 238 (451)
.+||++||++.+...|..++..|. ++..-|++..|-.-.+.-...... .-.+..++..+. .+-.-.
T Consensus 4 atIi~LHglGDsg~~~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~---------aWfd~~~~~~~~----~~d~~~ 70 (206)
T KOG2112|consen 4 ATIIFLHGLGDSGSGWAQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMN---------AWFDIMELSSDA----PEDEEG 70 (206)
T ss_pred EEEEEEecCCCCCccHHHHHHcCCCCCeeEEcCCCCCCcccccCCCccc---------ceecceeeCccc----chhhhH
Confidence 589999999999999998888874 467778876553322211000000 000000111110 011235
Q ss_pred HHHHHHHHHHHHHHh---CC--CCEEEEEeCcchHHHHHHHHhCCCccceEEEecc
Q 013006 239 VDLWQDQVCYFIKEV---IR--EPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNA 289 (451)
Q Consensus 239 ~~~~a~dv~~ll~~l---~~--~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~ 289 (451)
+...++.+..++++. ++ .++.+-|.|+||+++++.+..+|..+.+++-..+
T Consensus 71 ~~~aa~~i~~Li~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~ 126 (206)
T KOG2112|consen 71 LHRAADNIANLIDNEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSG 126 (206)
T ss_pred HHHHHHHHHHHHHHHHHcCCCccceeEcccCchHHHHHHHHhccccccceeecccc
Confidence 566667777777664 33 5789999999999999999999888888877765
No 137
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=98.49 E-value=2.9e-07 Score=83.04 Aligned_cols=90 Identities=20% Similarity=0.247 Sum_probs=53.7
Q ss_pred CcEEEecCCCC-ChhcHHHHHHhh-cCCce---EEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccc
Q 013006 160 PPVLFLPGFGV-GSFHYEKQLKDL-GKDYR---AWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASE 234 (451)
Q Consensus 160 p~VlllHG~~~-~~~~~~~~~~~L-~~~~~---Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 234 (451)
.||||+||.++ ....|..+.+.| ++||. |+++++-.......... ...
T Consensus 2 ~PVVlVHG~~~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~---------------------------~~~ 54 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGSPSVQN---------------------------AHM 54 (219)
T ss_dssp --EEEE--TTTTTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHHTHHHH---------------------------HHB
T ss_pred CCEEEECCCCcchhhCHHHHHHHHHHcCCCcceeEeccCCCCCCCCcccc---------------------------ccc
Confidence 48999999998 668899999998 55788 89999844433211000 000
Q ss_pred cccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhC
Q 013006 235 LAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACN 277 (451)
Q Consensus 235 ~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~ 277 (451)
..-+..++.+.|..++++.+. +|.||||||||+++-.+....
T Consensus 55 ~~~~~~~l~~fI~~Vl~~TGa-kVDIVgHS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 55 SCESAKQLRAFIDAVLAYTGA-KVDIVGHSMGGTIARYYIKGG 96 (219)
T ss_dssp -HHHHHHHHHHHHHHHHHHT---EEEEEETCHHHHHHHHHHHC
T ss_pred chhhHHHHHHHHHHHHHhhCC-EEEEEEcCCcCHHHHHHHHHc
Confidence 011234566666666777788 999999999999998887643
No 138
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=98.47 E-value=3e-05 Score=72.93 Aligned_cols=112 Identities=13% Similarity=0.057 Sum_probs=75.7
Q ss_pred CCeEEEEeecC-CCCCCCCcEEEecCCCCChhcH------HHHHHhhcC--CceEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 013006 143 PKFNVHYEKAG-CENVNSPPVLFLPGFGVGSFHY------EKQLKDLGK--DYRAWAIDFLGQGMSLPDEDPTPRSKEGD 213 (451)
Q Consensus 143 ~g~~l~y~~~g-~~~~~~p~VlllHG~~~~~~~~------~~~~~~L~~--~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~ 213 (451)
|++.|--..-. +...+...||+.-|.++.-+.. +..+..+++ +.+|+.+++||.|.|...
T Consensus 120 D~~~IDt~~I~~~~a~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G~----------- 188 (365)
T PF05677_consen 120 DGVKIDTMAIHQPEAKPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTGP----------- 188 (365)
T ss_pred CCEEEEEEEeeCCCCCCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCCC-----------
Confidence 56655554443 2223567999999988776651 123444433 689999999999999643
Q ss_pred chhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhC-----C--CCEEEEEeCcchHHHHHHHHhCCC----ccc
Q 013006 214 STEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVI-----R--EPVYVVGNSLGGFVAVYFAACNPH----LVK 282 (451)
Q Consensus 214 ~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~-----~--~~v~lvGhS~GG~val~~A~~~P~----~v~ 282 (451)
.+.++++.|-.+.++.|. + +.+++.|||+||.++..++.++.. -|+
T Consensus 189 -----------------------~s~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~~~~~~dgi~ 245 (365)
T PF05677_consen 189 -----------------------PSRKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKEVLKGSDGIR 245 (365)
T ss_pred -----------------------CCHHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhcccccCCCee
Confidence 356777777777776662 2 679999999999999886666532 344
Q ss_pred eEEEec
Q 013006 283 GVTLLN 288 (451)
Q Consensus 283 ~lvl~~ 288 (451)
=+++-+
T Consensus 246 ~~~ikD 251 (365)
T PF05677_consen 246 WFLIKD 251 (365)
T ss_pred EEEEec
Confidence 444444
No 139
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=98.47 E-value=1.1e-06 Score=77.22 Aligned_cols=160 Identities=15% Similarity=0.096 Sum_probs=105.0
Q ss_pred CcEEEecCCCC-ChhcHHHHHHhhcC-CceEEEEcCCCC-CCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccc
Q 013006 160 PPVLFLPGFGV-GSFHYEKQLKDLGK-DYRAWAIDFLGQ-GMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELA 236 (451)
Q Consensus 160 p~VlllHG~~~-~~~~~~~~~~~L~~-~~~Vi~~D~rG~-G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 236 (451)
..||++--..+ ....-+..++.++. ||.|+.+|+..= -.|.. ... .....| ++.
T Consensus 40 ~~li~i~DvfG~~~~n~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~-~~~-----------~~~~~w---------~~~-- 96 (242)
T KOG3043|consen 40 KVLIVIQDVFGFQFPNTREGADKVALNGYTVLVPDFFRGDPWSPS-LQK-----------SERPEW---------MKG-- 96 (242)
T ss_pred eEEEEEEeeeccccHHHHHHHHHHhcCCcEEEcchhhcCCCCCCC-CCh-----------hhhHHH---------Hhc--
Confidence 35666655433 33346677777754 799999997532 11110 000 111112 211
Q ss_pred cCHHHHHHHHHHHHHHh---C-CCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCCCCCCCCCCCchHHhhhcCCC
Q 013006 237 YSVDLWQDQVCYFIKEV---I-REPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPIRSPKLARILPWS 312 (451)
Q Consensus 237 ~s~~~~a~dv~~ll~~l---~-~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (451)
.+.+....++..+++.+ + .+++-++|++|||.++..+....| .+.+.+++-|+..
T Consensus 97 ~~~~~~~~~i~~v~k~lk~~g~~kkIGv~GfCwGak~vv~~~~~~~-~f~a~v~~hps~~-------------------- 155 (242)
T KOG3043|consen 97 HSPPKIWKDITAVVKWLKNHGDSKKIGVVGFCWGAKVVVTLSAKDP-EFDAGVSFHPSFV-------------------- 155 (242)
T ss_pred CCcccchhHHHHHHHHHHHcCCcceeeEEEEeecceEEEEeeccch-hheeeeEecCCcC--------------------
Confidence 34444455555555554 3 578999999999999999988887 6777777766420
Q ss_pred CCCCChHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCChHHHHHHHHhhccChhHHHHHHHHHhcCCCCCchhHHhhh
Q 013006 313 GTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRILETTQHPAAAASFASIMFAPQGNLSFREALSR 392 (451)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (451)
+ .+.
T Consensus 156 ---------------------------------------------------------------------------d-~~D 159 (242)
T KOG3043|consen 156 ---------------------------------------------------------------------------D-SAD 159 (242)
T ss_pred ---------------------------------------------------------------------------C-hhH
Confidence 0 122
Q ss_pred ccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCC-----CcEEEeCCCCCCcc
Q 013006 393 CQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPE-----APYYEISPAGHCPH 439 (451)
Q Consensus 393 l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~-----~~~~~i~~~gH~~~ 439 (451)
..++++|||++.|+.|.++|+....++.+.+.+ .++.++++-+|-.+
T Consensus 160 ~~~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~f~g~~HGf~ 211 (242)
T KOG3043|consen 160 IANVKAPILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQVKTFSGVGHGFV 211 (242)
T ss_pred HhcCCCCEEEEeecccccCCHHHHHHHHHHHhcCcccceeEEEcCCccchhh
Confidence 345789999999999999999988887777643 25889999999766
No 140
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=98.47 E-value=1.5e-05 Score=80.16 Aligned_cols=130 Identities=21% Similarity=0.253 Sum_probs=84.5
Q ss_pred Cccceeeec--CCeEEEEeecCCCC--CCCCcEEEecCCCCChhcHHHHHHh-------------------hcCCceEEE
Q 013006 134 ITSCFWEWK--PKFNVHYEKAGCEN--VNSPPVLFLPGFGVGSFHYEKQLKD-------------------LGKDYRAWA 190 (451)
Q Consensus 134 ~~~~~~~~~--~g~~l~y~~~g~~~--~~~p~VlllHG~~~~~~~~~~~~~~-------------------L~~~~~Vi~ 190 (451)
..+.++... .+..|+|......+ .++|.||.+.|.++++..|-.+.+. +.+..+|+.
T Consensus 11 ~~sGyl~~~~~~~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~~an~l~ 90 (415)
T PF00450_consen 11 QYSGYLPVNDNENAHLFYWFFESRNDPEDDPLILWLNGGPGCSSMWGLFGENGPFRINPDGPYTLEDNPYSWNKFANLLF 90 (415)
T ss_dssp EEEEEEEECTTTTEEEEEEEEE-SSGGCSS-EEEEEE-TTTB-THHHHHCTTSSEEEETTSTSEEEE-TT-GGGTSEEEE
T ss_pred EEEEEEecCCCCCcEEEEEEEEeCCCCCCccEEEEecCCceeccccccccccCceEEeecccccccccccccccccceEE
Confidence 345666666 67899987665432 4679999999999999888443211 123468999
Q ss_pred EcCC-CCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHh-------CCCCEEEEE
Q 013006 191 IDFL-GQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEV-------IREPVYVVG 262 (451)
Q Consensus 191 ~D~r-G~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l-------~~~~v~lvG 262 (451)
+|.| |.|.|...... ....+.++.++++..+|+.. ...+++|.|
T Consensus 91 iD~PvGtGfS~~~~~~----------------------------~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~G 142 (415)
T PF00450_consen 91 IDQPVGTGFSYGNDPS----------------------------DYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAG 142 (415)
T ss_dssp E--STTSTT-EESSGG----------------------------GGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEE
T ss_pred EeecCceEEeeccccc----------------------------cccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEc
Confidence 9955 99999643221 01247788888888777664 345899999
Q ss_pred eCcchHHHHHHHHh----C------CCccceEEEeccCC
Q 013006 263 NSLGGFVAVYFAAC----N------PHLVKGVTLLNATP 291 (451)
Q Consensus 263 hS~GG~val~~A~~----~------P~~v~~lvl~~~~~ 291 (451)
-|+||..+-.+|.. . +-.++++++.++..
T Consensus 143 ESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi~IGng~~ 181 (415)
T PF00450_consen 143 ESYGGHYVPALASYILQQNKKGDQPKINLKGIAIGNGWI 181 (415)
T ss_dssp ETTHHHHHHHHHHHHHHHTCC--STTSEEEEEEEESE-S
T ss_pred cccccccchhhHHhhhhccccccccccccccceecCccc
Confidence 99999887666653 2 33589999999853
No 141
>PRK04940 hypothetical protein; Provisional
Probab=98.46 E-value=1.7e-05 Score=68.75 Aligned_cols=33 Identities=21% Similarity=0.296 Sum_probs=28.7
Q ss_pred CCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCC
Q 013006 256 EPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATP 291 (451)
Q Consensus 256 ~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~ 291 (451)
+++.|||.|+||+.|..+|.++. + +.||+||+.
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~g--~-~aVLiNPAv 92 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLCG--I-RQVIFNPNL 92 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHHC--C-CEEEECCCC
Confidence 57999999999999999999985 3 778889863
No 142
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=98.44 E-value=2.1e-07 Score=84.40 Aligned_cols=47 Identities=17% Similarity=0.290 Sum_probs=35.9
Q ss_pred HHHHHHHHh-C--CCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCC
Q 013006 245 QVCYFIKEV-I--REPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPF 292 (451)
Q Consensus 245 dv~~ll~~l-~--~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~ 292 (451)
...++|... . .++|.|+|.|.||.+|+.+|+.+| .|+++|.+++...
T Consensus 8 ~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~~ 57 (213)
T PF08840_consen 8 EAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSSV 57 (213)
T ss_dssp HHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--SB
T ss_pred HHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCcee
Confidence 344444443 2 368999999999999999999999 7999999998753
No 143
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=98.44 E-value=1.9e-07 Score=89.97 Aligned_cols=106 Identities=21% Similarity=0.276 Sum_probs=65.0
Q ss_pred CCCCCcEEEecCCCCCh--hcHHH-HHHh-hcC---CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCC
Q 013006 156 NVNSPPVLFLPGFGVGS--FHYEK-QLKD-LGK---DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKA 228 (451)
Q Consensus 156 ~~~~p~VlllHG~~~~~--~~~~~-~~~~-L~~---~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~ 228 (451)
+++.|++|++|||..+. ..|.. +.+. |.+ ++.||++||...-... .
T Consensus 68 n~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~~-----Y---------------------- 120 (331)
T PF00151_consen 68 NPSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASNN-----Y---------------------- 120 (331)
T ss_dssp -TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS------H----------------------
T ss_pred CCCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhcccc-----c----------------------
Confidence 35689999999998777 45654 4443 443 6999999996432110 0
Q ss_pred CccccccccCHHHHHHHHHHHHHHh------CCCCEEEEEeCcchHHHHHHHHhCCC--ccceEEEeccCCC
Q 013006 229 QPWASELAYSVDLWQDQVCYFIKEV------IREPVYVVGNSLGGFVAVYFAACNPH--LVKGVTLLNATPF 292 (451)
Q Consensus 229 ~~~~~~~~~s~~~~a~dv~~ll~~l------~~~~v~lvGhS~GG~val~~A~~~P~--~v~~lvl~~~~~~ 292 (451)
...........+.|..+|+.| ..++++|||||+||.+|-.++..... +|..++-++|+.+
T Consensus 121 ----~~a~~n~~~vg~~la~~l~~L~~~~g~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP 188 (331)
T PF00151_consen 121 ----PQAVANTRLVGRQLAKFLSFLINNFGVPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGP 188 (331)
T ss_dssp ----HHHHHHHHHHHHHHHHHHHHHHHHH---GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-T
T ss_pred ----cchhhhHHHHHHHHHHHHHHHHhhcCCChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCcccc
Confidence 000122334444444444443 34789999999999999999988877 8999999999754
No 144
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=98.43 E-value=2.9e-06 Score=84.85 Aligned_cols=130 Identities=18% Similarity=0.054 Sum_probs=90.1
Q ss_pred ecCCeEEEEeecCCCC----CCCCcEEEecCCCCCh-----hcHHHHH--Hhh-cCCceEEEEcCCCCCCCCCCCCCCCC
Q 013006 141 WKPKFNVHYEKAGCEN----VNSPPVLFLPGFGVGS-----FHYEKQL--KDL-GKDYRAWAIDFLGQGMSLPDEDPTPR 208 (451)
Q Consensus 141 ~~~g~~l~y~~~g~~~----~~~p~VlllHG~~~~~-----~~~~~~~--~~L-~~~~~Vi~~D~rG~G~S~~~~~~~~~ 208 (451)
.+.|.+++-....|.+ ++-|+++++-|.++-. +.|...+ ..| +.||-||.+|-||.......-..
T Consensus 620 s~tg~~lYgmiyKPhn~~pgkkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hRGlkFE~--- 696 (867)
T KOG2281|consen 620 SKTGLTLYGMIYKPHNFQPGKKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHRGLKFES--- 696 (867)
T ss_pred cCCCcEEEEEEEccccCCCCCCCceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCccccchhhHH---
Confidence 3567777766665432 3468999999987543 3333322 235 45899999999997554311000
Q ss_pred CCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhC---CCCEEEEEeCcchHHHHHHHHhCCCccceEE
Q 013006 209 SKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVI---REPVYVVGNSLGGFVAVYFAACNPHLVKGVT 285 (451)
Q Consensus 209 ~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~---~~~v~lvGhS~GG~val~~A~~~P~~v~~lv 285 (451)
. =..+.....++|+++-++-+.++.+ .++|.+-|+|+||++++....++|+.++..|
T Consensus 697 --------~------------ik~kmGqVE~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAI 756 (867)
T KOG2281|consen 697 --------H------------IKKKMGQVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAI 756 (867)
T ss_pred --------H------------HhhccCeeeehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhhcCcceeeEEe
Confidence 0 0011223688999999999999985 4789999999999999999999999888777
Q ss_pred EeccCCCC
Q 013006 286 LLNATPFW 293 (451)
Q Consensus 286 l~~~~~~~ 293 (451)
.=+|...|
T Consensus 757 AGapVT~W 764 (867)
T KOG2281|consen 757 AGAPVTDW 764 (867)
T ss_pred ccCcceee
Confidence 76665433
No 145
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=98.36 E-value=6.5e-06 Score=78.29 Aligned_cols=44 Identities=20% Similarity=0.265 Sum_probs=35.0
Q ss_pred CCCCEEEEeeCCCCCCChHHHHHHHHHC-----CCCcEEEeCCCCCCcc
Q 013006 396 NGVPICLIYGKEDPWVKPVWGLQVKRQV-----PEAPYYEISPAGHCPH 439 (451)
Q Consensus 396 i~~PvLii~G~~D~~v~~~~~~~l~~~l-----p~~~~~~i~~~gH~~~ 439 (451)
-++|++|.+|..|.++|+...+.+.+.+ .+++++.+++.+|...
T Consensus 218 P~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~V~~~~~~~~~H~~~ 266 (290)
T PF03583_consen 218 PTVPVLIYQGTADEVVPPADTDALVAKWCAAGGADVEYVRYPGGGHLGA 266 (290)
T ss_pred CCCCEEEEecCCCCCCChHHHHHHHHHHHHcCCCCEEEEecCCCChhhh
Confidence 3799999999999999998887765543 3467788888999753
No 146
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=98.33 E-value=5.9e-06 Score=74.24 Aligned_cols=95 Identities=24% Similarity=0.263 Sum_probs=72.5
Q ss_pred EecCCC--CChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccccCHHH
Q 013006 164 FLPGFG--VGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDL 241 (451)
Q Consensus 164 llHG~~--~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~ 241 (451)
++|..+ ++...|..+...|...+.|+++|.+|++.+.... .+++.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~~~~g~~~~~~~~---------------------------------~~~~~ 48 (212)
T smart00824 2 CFPSTAAPSGPHEYARLAAALRGRRDVSALPLPGFGPGEPLP---------------------------------ASADA 48 (212)
T ss_pred ccCCCCCCCcHHHHHHHHHhcCCCccEEEecCCCCCCCCCCC---------------------------------CCHHH
Confidence 344433 6678899999999888999999999998764321 36677
Q ss_pred HHHHHHHHHHH-hCCCCEEEEEeCcchHHHHHHHHh---CCCccceEEEeccCC
Q 013006 242 WQDQVCYFIKE-VIREPVYVVGNSLGGFVAVYFAAC---NPHLVKGVTLLNATP 291 (451)
Q Consensus 242 ~a~dv~~ll~~-l~~~~v~lvGhS~GG~val~~A~~---~P~~v~~lvl~~~~~ 291 (451)
+++.+...+.. ....+++++|||+||.++..++.+ .++.+.+++++++.+
T Consensus 49 ~~~~~~~~l~~~~~~~~~~l~g~s~Gg~~a~~~a~~l~~~~~~~~~l~~~~~~~ 102 (212)
T smart00824 49 LVEAQAEAVLRAAGGRPFVLVGHSSGGLLAHAVAARLEARGIPPAAVVLLDTYP 102 (212)
T ss_pred HHHHHHHHHHHhcCCCCeEEEEECHHHHHHHHHHHHHHhCCCCCcEEEEEccCC
Confidence 77665554443 446789999999999999998886 456799999998753
No 147
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.32 E-value=5e-06 Score=76.43 Aligned_cols=107 Identities=12% Similarity=0.084 Sum_probs=66.3
Q ss_pred CCCcEEEecCCCCChhcHHH----HHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCcccc
Q 013006 158 NSPPVLFLPGFGVGSFHYEK----QLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWAS 233 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~~~~----~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~ 233 (451)
++..+||+||+..+...-.. +...+.-...++.+.||..|.-.. .. ... +
T Consensus 17 ~~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~---Y~-----------------~d~------~ 70 (233)
T PF05990_consen 17 DKEVLVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLG---YF-----------------YDR------E 70 (233)
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhh---hh-----------------hhh------h
Confidence 56799999999987554322 222333234899999998876211 00 000 0
Q ss_pred ccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHh----CC-----CccceEEEeccC
Q 013006 234 ELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAAC----NP-----HLVKGVTLLNAT 290 (451)
Q Consensus 234 ~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~----~P-----~~v~~lvl~~~~ 290 (451)
....+-+.+++-+..+.+..+.++|+|++||||+.+.+..... .+ .++..++|++|-
T Consensus 71 ~a~~s~~~l~~~L~~L~~~~~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApD 136 (233)
T PF05990_consen 71 SARFSGPALARFLRDLARAPGIKRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPD 136 (233)
T ss_pred hHHHHHHHHHHHHHHHHhccCCceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCC
Confidence 0012334444444444444467899999999999999877654 22 368899999874
No 148
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.30 E-value=1.9e-06 Score=77.55 Aligned_cols=103 Identities=17% Similarity=0.143 Sum_probs=72.1
Q ss_pred CCCcEEEecCCCCChhcHHHHHHhhcC-CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccc
Q 013006 158 NSPPVLFLPGFGVGSFHYEKQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELA 236 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~~~~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 236 (451)
.=|.|+|+||+......|..++.+++. ||-|+++++-.--. +....+ .
T Consensus 45 ~yPVilF~HG~~l~ns~Ys~lL~HIASHGfIVVAPQl~~~~~---p~~~~E----------------------------i 93 (307)
T PF07224_consen 45 TYPVILFLHGFNLYNSFYSQLLAHIASHGFIVVAPQLYTLFP---PDGQDE----------------------------I 93 (307)
T ss_pred CccEEEEeechhhhhHHHHHHHHHHhhcCeEEEechhhcccC---CCchHH----------------------------H
Confidence 358999999999999999999999966 79999999875311 111100 0
Q ss_pred cCHHHHHHHHHHHHHHh-------CCCCEEEEEeCcchHHHHHHHHhCC--CccceEEEeccCC
Q 013006 237 YSVDLWQDQVCYFIKEV-------IREPVYVVGNSLGGFVAVYFAACNP--HLVKGVTLLNATP 291 (451)
Q Consensus 237 ~s~~~~a~dv~~ll~~l-------~~~~v~lvGhS~GG~val~~A~~~P--~~v~~lvl~~~~~ 291 (451)
-+....++.+..-+.++ ++.++.++|||.||-+|..+|..+- -.+.++|.++|..
T Consensus 94 ~~aa~V~~WL~~gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~ 157 (307)
T PF07224_consen 94 KSAASVINWLPEGLQHVLPENVEANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVA 157 (307)
T ss_pred HHHHHHHHHHHhhhhhhCCCCcccccceEEEeecCCccHHHHHHHhcccccCchhheecccccC
Confidence 12222223333223332 3468999999999999999999773 2589999999875
No 149
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=98.24 E-value=5.4e-06 Score=83.64 Aligned_cols=129 Identities=16% Similarity=0.032 Sum_probs=88.2
Q ss_pred CCccceeeecCCeEEEEeecCCCCC-CCCcEEEecCCCCChh---cH--HHHHH---hh-cCCceEEEEcCCCCCCCCCC
Q 013006 133 PITSCFWEWKPKFNVHYEKAGCENV-NSPPVLFLPGFGVGSF---HY--EKQLK---DL-GKDYRAWAIDFLGQGMSLPD 202 (451)
Q Consensus 133 ~~~~~~~~~~~g~~l~y~~~g~~~~-~~p~VlllHG~~~~~~---~~--~~~~~---~L-~~~~~Vi~~D~rG~G~S~~~ 202 (451)
..++..++.+||++|+...+-|.+. +.|+++..+-++-... .+ ....+ .+ ++||.|+..|.||.|.|+..
T Consensus 18 ~~~~v~V~MRDGvrL~~dIy~Pa~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~SeG~ 97 (563)
T COG2936 18 IERDVMVPMRDGVRLAADIYRPAGAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGGSEGV 97 (563)
T ss_pred eeeeeeEEecCCeEEEEEEEccCCCCCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccccCCcc
Confidence 4556788899999999998877533 3477777772222221 11 11222 33 66899999999999999754
Q ss_pred CCCCCCCCCCCchhhhhccccCCCCCCccccccccC-HHHHHHHHHHHHHHhCC--CCEEEEEeCcchHHHHHHHHhCCC
Q 013006 203 EDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYS-VDLWQDQVCYFIKEVIR--EPVYVVGNSLGGFVAVYFAACNPH 279 (451)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s-~~~~a~dv~~ll~~l~~--~~v~lvGhS~GG~val~~A~~~P~ 279 (451)
-.+. ++ -.+-.-|+.++|.+... .+|..+|.|++|+..+.+|+..|.
T Consensus 98 ~~~~------------------------------~~~E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pP 147 (563)
T COG2936 98 FDPE------------------------------SSREAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPP 147 (563)
T ss_pred ccee------------------------------ccccccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCc
Confidence 3331 12 11112255555555543 689999999999999999999988
Q ss_pred ccceEEEeccCC
Q 013006 280 LVKGVTLLNATP 291 (451)
Q Consensus 280 ~v~~lvl~~~~~ 291 (451)
-+++++.+.+..
T Consensus 148 aLkai~p~~~~~ 159 (563)
T COG2936 148 ALKAIAPTEGLV 159 (563)
T ss_pred hheeeccccccc
Confidence 899999888753
No 150
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=98.23 E-value=7.2e-05 Score=66.82 Aligned_cols=80 Identities=21% Similarity=0.393 Sum_probs=55.4
Q ss_pred CCcEEEecCCCCChhcHHHHHHhhcCCceE-EEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCcccccccc
Q 013006 159 SPPVLFLPGFGVGSFHYEKQLKDLGKDYRA-WAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAY 237 (451)
Q Consensus 159 ~p~VlllHG~~~~~~~~~~~~~~L~~~~~V-i~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 237 (451)
...|||..|+|.+...+..+. +..+++| +++|+|..-.
T Consensus 11 ~~LilfF~GWg~d~~~f~hL~--~~~~~D~l~~yDYr~l~~--------------------------------------- 49 (213)
T PF04301_consen 11 KELILFFAGWGMDPSPFSHLI--LPENYDVLICYDYRDLDF--------------------------------------- 49 (213)
T ss_pred CeEEEEEecCCCChHHhhhcc--CCCCccEEEEecCccccc---------------------------------------
Confidence 368999999999988776553 2345554 6788874311
Q ss_pred CHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCC
Q 013006 238 SVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPF 292 (451)
Q Consensus 238 s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~ 292 (451)
+. | --+.+.++|||+|||-.+|..+....| ++..|.++++++
T Consensus 50 d~-----~------~~~y~~i~lvAWSmGVw~A~~~l~~~~--~~~aiAINGT~~ 91 (213)
T PF04301_consen 50 DF-----D------LSGYREIYLVAWSMGVWAANRVLQGIP--FKRAIAINGTPY 91 (213)
T ss_pred cc-----c------cccCceEEEEEEeHHHHHHHHHhccCC--cceeEEEECCCC
Confidence 10 1 124588999999999999988765543 677777887754
No 151
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.12 E-value=9.3e-06 Score=78.89 Aligned_cols=99 Identities=18% Similarity=0.258 Sum_probs=79.5
Q ss_pred CCcEEEecCCCCChhcHHHHHHhhcC-Cce---EEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccc
Q 013006 159 SPPVLFLPGFGVGSFHYEKQLKDLGK-DYR---AWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASE 234 (451)
Q Consensus 159 ~p~VlllHG~~~~~~~~~~~~~~L~~-~~~---Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 234 (451)
.-+++++||++.+...|..+...+.. ++. ++.+++++..... ..
T Consensus 59 ~~pivlVhG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~---~~----------------------------- 106 (336)
T COG1075 59 KEPIVLVHGLGGGYGNFLPLDYRLAILGWLTNGVYAFELSGGDGTY---SL----------------------------- 106 (336)
T ss_pred CceEEEEccCcCCcchhhhhhhhhcchHHHhcccccccccccCCCc---cc-----------------------------
Confidence 35899999998888888888777754 454 8888888762211 10
Q ss_pred cccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCC--CccceEEEeccC
Q 013006 235 LAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNP--HLVKGVTLLNAT 290 (451)
Q Consensus 235 ~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P--~~v~~lvl~~~~ 290 (451)
....+.+...+.+++...+.+++.|+||||||.+...++..++ .+|+.++.++++
T Consensus 107 -~~~~~ql~~~V~~~l~~~ga~~v~LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp 163 (336)
T COG1075 107 -AVRGEQLFAYVDEVLAKTGAKKVNLIGHSMGGLDSRYYLGVLGGANRVASVVTLGTP 163 (336)
T ss_pred -cccHHHHHHHHHHHHhhcCCCceEEEeecccchhhHHHHhhcCccceEEEEEEeccC
Confidence 1466777788888888889999999999999999999999988 899999999985
No 152
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.99 E-value=7.5e-05 Score=68.83 Aligned_cols=129 Identities=17% Similarity=0.100 Sum_probs=82.8
Q ss_pred CCeEEEEeecCCCC--CCCCcEEEecCCCCChhcHHHHH--HhhcC--CceEEEEcCCCCCCCCCCCCCCCCCCCCCchh
Q 013006 143 PKFNVHYEKAGCEN--VNSPPVLFLPGFGVGSFHYEKQL--KDLGK--DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTE 216 (451)
Q Consensus 143 ~g~~l~y~~~g~~~--~~~p~VlllHG~~~~~~~~~~~~--~~L~~--~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~ 216 (451)
+|.+..|+.+-|.. ...|.||++||-.++...++... ..|++ +|-|+.+|- +..+-....
T Consensus 43 ~g~~r~y~l~vP~g~~~~apLvv~LHG~~~sgag~~~~sg~d~lAd~~gFlV~yPdg--~~~~wn~~~------------ 108 (312)
T COG3509 43 NGLKRSYRLYVPPGLPSGAPLVVVLHGSGGSGAGQLHGTGWDALADREGFLVAYPDG--YDRAWNANG------------ 108 (312)
T ss_pred CCCccceEEEcCCCCCCCCCEEEEEecCCCChHHhhcccchhhhhcccCcEEECcCc--cccccCCCc------------
Confidence 45666666555432 23478999999998887766554 55644 688888852 222210000
Q ss_pred hhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCC--CEEEEEeCcchHHHHHHHHhCCCccceEEEeccCC
Q 013006 217 EKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIRE--PVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATP 291 (451)
Q Consensus 217 ~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~--~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~ 291 (451)
...|.-..+ .....-++..+.+-+..++.+.+++ +|++.|.|-||.++..++..+|+.+.++..++...
T Consensus 109 --~~~~~~p~~----~~~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 109 --CGNWFGPAD----RRRGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred --ccccCCccc----ccCCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 000000000 0001135556666666777777776 79999999999999999999999999999998764
No 153
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=97.95 E-value=8.3e-05 Score=65.29 Aligned_cols=99 Identities=16% Similarity=0.212 Sum_probs=72.2
Q ss_pred CCcEEEecCCCCChhc---HHHHHHhhcC-CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccc
Q 013006 159 SPPVLFLPGFGVGSFH---YEKQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASE 234 (451)
Q Consensus 159 ~p~VlllHG~~~~~~~---~~~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 234 (451)
+..|||+-|++...-. -..+...|.+ ++.++-+-++.+- .-||.
T Consensus 36 ~~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy----------------------~G~Gt---------- 83 (299)
T KOG4840|consen 36 SVKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSY----------------------NGYGT---------- 83 (299)
T ss_pred EEEEEEEcccCCCccccccHHHHHHHHhhccceeeeeeccccc----------------------ccccc----------
Confidence 4679999999877543 3455666644 6888887765320 01111
Q ss_pred cccCHHHHHHHHHHHHHHhCC----CCEEEEEeCcchHHHHHHHHh--CCCccceEEEeccCC
Q 013006 235 LAYSVDLWQDQVCYFIKEVIR----EPVYVVGNSLGGFVAVYFAAC--NPHLVKGVTLLNATP 291 (451)
Q Consensus 235 ~~~s~~~~a~dv~~ll~~l~~----~~v~lvGhS~GG~val~~A~~--~P~~v~~lvl~~~~~ 291 (451)
.++++-++|+++++++++. .+|+|+|||.|+.=.+++... .|..+++.|+.+|..
T Consensus 84 --~slk~D~edl~~l~~Hi~~~~fSt~vVL~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVS 144 (299)
T KOG4840|consen 84 --FSLKDDVEDLKCLLEHIQLCGFSTDVVLVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVS 144 (299)
T ss_pred --ccccccHHHHHHHHHHhhccCcccceEEEecCccchHHHHHHHhccchHHHHHHHHhCccc
Confidence 5788889999999998864 479999999999988888732 467899999988864
No 154
>KOG3101 consensus Esterase D [General function prediction only]
Probab=97.91 E-value=9.3e-05 Score=64.51 Aligned_cols=117 Identities=21% Similarity=0.368 Sum_probs=78.5
Q ss_pred CCCcEEEecCCCCChhcHHH--HHHhhc--CCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCC-----
Q 013006 158 NSPPVLFLPGFGVGSFHYEK--QLKDLG--KDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKA----- 228 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~~~~--~~~~L~--~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~----- 228 (451)
.-|++.++-|+....+.+-. ..+..+ .++.|+++|..=.|-.- ++.++.|.||.-+
T Consensus 43 ~~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v---------------~g~~eswDFG~GAGFYvn 107 (283)
T KOG3101|consen 43 RCPVLFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEV---------------AGDDESWDFGQGAGFYVN 107 (283)
T ss_pred cCceEEEecCCcccchhhHhhhhHHHhHhhcCeEEECCCCCCCcccc---------------CCCcccccccCCceeEEe
Confidence 35889999999877766532 222222 26889999965444321 1556689888754
Q ss_pred ---CccccccccCHHHH-HHHHHHHHHH----hCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCC
Q 013006 229 ---QPWASELAYSVDLW-QDQVCYFIKE----VIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATP 291 (451)
Q Consensus 229 ---~~~~~~~~~s~~~~-a~dv~~ll~~----l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~ 291 (451)
++|... |.+.++ ++.+-+++.. +...++.|.||||||.=|+..+.+.|.+.+++-..+|..
T Consensus 108 At~epw~~~--yrMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~ 176 (283)
T KOG3101|consen 108 ATQEPWAKH--YRMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPIC 176 (283)
T ss_pred cccchHhhh--hhHHHHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceecccccc
Confidence 666553 333333 3444444442 233578999999999999999999999999988877753
No 155
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=97.88 E-value=2.5e-05 Score=71.05 Aligned_cols=89 Identities=20% Similarity=0.223 Sum_probs=50.2
Q ss_pred CCcEEEecCCCCChhcHHHHHHhhcC---CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCcccccc
Q 013006 159 SPPVLFLPGFGVGSFHYEKQLKDLGK---DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASEL 235 (451)
Q Consensus 159 ~p~VlllHG~~~~~~~~~~~~~~L~~---~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~ 235 (451)
.-.|||+||+.++...|..+...|.. ++.--.+...++.... .... +..
T Consensus 4 ~hLvV~vHGL~G~~~d~~~~~~~l~~~~~~~~~~~i~~~~~~~n~--~~T~--------------------------~gI 55 (217)
T PF05057_consen 4 VHLVVFVHGLWGNPADMRYLKNHLEKIPEDLPNARIVVLGYSNNE--FKTF--------------------------DGI 55 (217)
T ss_pred CEEEEEeCCCCCCHHHHHHHHHHHHHhhhhcchhhhhhhcccccc--cccc--------------------------hhh
Confidence 45799999999999999877766643 2211122222221110 0000 000
Q ss_pred ccCHHHHHHHHHHHHHHhCC--CCEEEEEeCcchHHHHHHHH
Q 013006 236 AYSVDLWQDQVCYFIKEVIR--EPVYVVGNSLGGFVAVYFAA 275 (451)
Q Consensus 236 ~~s~~~~a~dv~~ll~~l~~--~~v~lvGhS~GG~val~~A~ 275 (451)
....+.+++.|.+.++.... .++.+|||||||.++-.+..
T Consensus 56 ~~~g~rL~~eI~~~~~~~~~~~~~IsfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 56 DVCGERLAEEILEHIKDYESKIRKISFIGHSLGGLIARYALG 97 (217)
T ss_pred HHHHHHHHHHHHHhccccccccccceEEEecccHHHHHHHHH
Confidence 12233445555555554444 48999999999999865544
No 156
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=97.88 E-value=0.00016 Score=72.28 Aligned_cols=47 Identities=17% Similarity=0.161 Sum_probs=41.0
Q ss_pred CCCCCEEEEeeCCCCCCChHHHHHHHHHCCC-CcEEEeCCCCCCcccc
Q 013006 395 MNGVPICLIYGKEDPWVKPVWGLQVKRQVPE-APYYEISPAGHCPHDE 441 (451)
Q Consensus 395 ~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~-~~~~~i~~~gH~~~~e 441 (451)
.++.|+|||-|.+|..++++..+.+.++... .+++++.+++|.+-.-
T Consensus 302 dmk~PVLFV~Gsnd~mcspn~ME~vreKMqA~~elhVI~~adhsmaip 349 (784)
T KOG3253|consen 302 DMKQPVLFVIGSNDHMCSPNSMEEVREKMQAEVELHVIGGADHSMAIP 349 (784)
T ss_pred hcCCceEEEecCCcccCCHHHHHHHHHHhhccceEEEecCCCccccCC
Confidence 4689999999999999999999999888754 6899999999987543
No 157
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=97.83 E-value=0.00029 Score=65.14 Aligned_cols=124 Identities=15% Similarity=0.182 Sum_probs=72.6
Q ss_pred CCCcEEEecCCCCChhcHHHHHHhhcC-CceEEEEcCCCCCCCCCC-CCCCCCCCCCCchhhhhccccCCCCCCcccccc
Q 013006 158 NSPPVLFLPGFGVGSFHYEKQLKDLGK-DYRAWAIDFLGQGMSLPD-EDPTPRSKEGDSTEEKNFLWGFGDKAQPWASEL 235 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~~~~~~~~L~~-~~~Vi~~D~rG~G~S~~~-~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~ 235 (451)
+-|.|||.||++++...|..+.-.|+. ||-|.++..|-+-.+--- -.+.+ . .|.-.+.|-.-...+.-.++.
T Consensus 117 k~PvvvFSHGLggsRt~YSa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~-~-----n~~lveq~~~ir~v~~~ekef 190 (399)
T KOG3847|consen 117 KYPVVVFSHGLGGSRTLYSAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKH-E-----NEPLVEQWIKIRLVEANEKEF 190 (399)
T ss_pred CccEEEEecccccchhhHHHHhhhHhhCceEEEEeecccCcceeEEEecccc-c-----CCcccccceEeeeeccCceeE
Confidence 458999999999999999999999965 799999999876544100 00000 0 001122222111111111111
Q ss_pred -------ccCHHHHHHHHHHHHHHh------------------------CCCCEEEEEeCcchHHHHHHHHhCCCccceE
Q 013006 236 -------AYSVDLWQDQVCYFIKEV------------------------IREPVYVVGNSLGGFVAVYFAACNPHLVKGV 284 (451)
Q Consensus 236 -------~~s~~~~a~dv~~ll~~l------------------------~~~~v~lvGhS~GG~val~~A~~~P~~v~~l 284 (451)
.....+....+ .+|+.+ .-.++.++|||+||++++...+.+. .++..
T Consensus 191 ~irNeqv~~R~~Ec~~aL-~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~t-~Frca 268 (399)
T KOG3847|consen 191 HIRNEQVGQRAQECQKAL-KILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSHT-DFRCA 268 (399)
T ss_pred EeeCHHHHHHHHHHHHHH-HHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhcccc-ceeee
Confidence 11122222222 222222 1246899999999999998877764 68888
Q ss_pred EEecc
Q 013006 285 TLLNA 289 (451)
Q Consensus 285 vl~~~ 289 (451)
|++++
T Consensus 269 I~lD~ 273 (399)
T KOG3847|consen 269 IALDA 273 (399)
T ss_pred eeeee
Confidence 88886
No 158
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.76 E-value=0.00014 Score=69.05 Aligned_cols=107 Identities=17% Similarity=0.266 Sum_probs=71.5
Q ss_pred CCCcEEEecCCCCChhc-HH---HHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCcccc
Q 013006 158 NSPPVLFLPGFGVGSFH-YE---KQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWAS 233 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~-~~---~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~ 233 (451)
.+..+||+||++.+-+. -. .+...+......+.+-||-.|.--. +.++. +
T Consensus 115 ~k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~--------------------Yn~Dr------e 168 (377)
T COG4782 115 AKTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLG--------------------YNYDR------E 168 (377)
T ss_pred CCeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeee--------------------cccch------h
Confidence 46789999999866432 22 2333344457788999997765310 00000 1
Q ss_pred ccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHh--------CCCccceEEEeccC
Q 013006 234 ELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAAC--------NPHLVKGVTLLNAT 290 (451)
Q Consensus 234 ~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~--------~P~~v~~lvl~~~~ 290 (451)
...|+-+++..-+..+.+....++|+|++||||..++++...+ .+.+++-+||.+|-
T Consensus 169 S~~~Sr~aLe~~lr~La~~~~~~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPD 233 (377)
T COG4782 169 STNYSRPALERLLRYLATDKPVKRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPD 233 (377)
T ss_pred hhhhhHHHHHHHHHHHHhCCCCceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCC
Confidence 1136777777777777777778999999999999999877654 24468888888774
No 159
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=97.76 E-value=0.00013 Score=65.46 Aligned_cols=114 Identities=23% Similarity=0.264 Sum_probs=75.2
Q ss_pred CCcEEEecCCCCChhcHHHHHHhhcCCc------eEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhh--ccccCCCCCCc
Q 013006 159 SPPVLFLPGFGVGSFHYEKQLKDLGKDY------RAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKN--FLWGFGDKAQP 230 (451)
Q Consensus 159 ~p~VlllHG~~~~~~~~~~~~~~L~~~~------~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~--~~w~~~~~~~~ 230 (451)
.-|.+|+||.+++.......+..|.+.+ -++.+|--| |-.....- ++ ...+ .-.+|++..
T Consensus 45 ~iPTIfIhGsgG~asS~~~Mv~ql~~~~~~~~e~Lt~~V~~dg---slk~tGk~--~K-----d~~nP~I~~gfe~n~-- 112 (288)
T COG4814 45 AIPTIFIHGSGGTASSLNGMVNQLLPDYKAGTESLTMTVDVDG---SLKVTGKI--SK-----DAKNPIIEFGFEDNT-- 112 (288)
T ss_pred ccceEEEecCCCChhHHHHHHHHhhhcccccccceEEEEcCCC---cEEEeeee--cc-----cCCCCeEEEEEecCc--
Confidence 4589999999999999999998886544 356666655 21110000 00 0111 113444433
Q ss_pred cccccccCHHHHHHHHHHHHHHh----CCCCEEEEEeCcchHHHHHHHHhCCC-----ccceEEEeccC
Q 013006 231 WASELAYSVDLWQDQVCYFIKEV----IREPVYVVGNSLGGFVAVYFAACNPH-----LVKGVTLLNAT 290 (451)
Q Consensus 231 ~~~~~~~s~~~~a~dv~~ll~~l----~~~~v~lvGhS~GG~val~~A~~~P~-----~v~~lvl~~~~ 290 (451)
-+..++...++.++..| +++++.+|||||||.-...++..+.. .++++|.+++.
T Consensus 113 ------~s~~~~s~wlk~~msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gp 175 (288)
T COG4814 113 ------ASGLDQSKWLKKAMSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGP 175 (288)
T ss_pred ------CchhhHHHHHHHHHHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccc
Confidence 35666666666666555 68999999999999999988886532 48999999874
No 160
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=97.70 E-value=0.0009 Score=66.83 Aligned_cols=51 Identities=20% Similarity=0.236 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHHHh-----CCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccC
Q 013006 240 DLWQDQVCYFIKEV-----IREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNAT 290 (451)
Q Consensus 240 ~~~a~dv~~ll~~l-----~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~ 290 (451)
+.+++++.-++++. +.++.+|+|+||||..|+.++.++|+++.+++.+++.
T Consensus 267 ~~l~~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs 322 (411)
T PRK10439 267 LAVQQELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGS 322 (411)
T ss_pred HHHHHHHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEeccc
Confidence 44566776666654 2356899999999999999999999999999999975
No 161
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=97.70 E-value=0.00042 Score=70.20 Aligned_cols=108 Identities=25% Similarity=0.289 Sum_probs=69.2
Q ss_pred CCcEEEecCCCCChhc-H--HHHHHhhcC--CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCcccc
Q 013006 159 SPPVLFLPGFGVGSFH-Y--EKQLKDLGK--DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWAS 233 (451)
Q Consensus 159 ~p~VlllHG~~~~~~~-~--~~~~~~L~~--~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~ 233 (451)
+|.+|++ |.-+.... | ..++..|++ +--|+++.+|-+|.|.+....+. ..
T Consensus 29 gpifl~~-ggE~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~------------------------~n 83 (434)
T PF05577_consen 29 GPIFLYI-GGEGPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLST------------------------EN 83 (434)
T ss_dssp SEEEEEE---SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGG------------------------ST
T ss_pred CCEEEEE-CCCCccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccch------------------------hh
Confidence 5555555 44444432 2 335566765 57899999999999976543211 01
Q ss_pred ccccCHHHHHHHHHHHHHHhC-------CCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCC
Q 013006 234 ELAYSVDLWQDQVCYFIKEVI-------REPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATP 291 (451)
Q Consensus 234 ~~~~s~~~~a~dv~~ll~~l~-------~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~ 291 (451)
....|.++..+|+..|++++. ..|++++|-|+||++|..+-.+||+.|.+.+.-+++.
T Consensus 84 L~yLt~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv 148 (434)
T PF05577_consen 84 LRYLTSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPV 148 (434)
T ss_dssp TTC-SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--C
T ss_pred HHhcCHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEecccee
Confidence 123799999999999998764 1479999999999999999999999999998887753
No 162
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=97.65 E-value=0.0077 Score=55.71 Aligned_cols=56 Identities=14% Similarity=0.129 Sum_probs=44.0
Q ss_pred CCCCCEEEEeeCCCCCCChHHHHHHHHHCC----CCcEEEeCCCCCCcccc-ChHHHHhhh
Q 013006 395 MNGVPICLIYGKEDPWVKPVWGLQVKRQVP----EAPYYEISPAGHCPHDE-VPEVCSLCL 450 (451)
Q Consensus 395 ~i~~PvLii~G~~D~~v~~~~~~~l~~~lp----~~~~~~i~~~gH~~~~e-~p~~v~~~I 450 (451)
...+|-|+++++.|.+++.+..++.++... +++...++++.|+.|+. +|++..+++
T Consensus 176 ~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~~p~~Y~~~v 236 (240)
T PF05705_consen 176 PSRCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAHLRKHPDRYWRAV 236 (240)
T ss_pred CCCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhhcccCHHHHHHHH
Confidence 356899999999999999987776655432 25677788999997765 888887765
No 163
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=97.61 E-value=0.024 Score=57.06 Aligned_cols=132 Identities=19% Similarity=0.238 Sum_probs=79.2
Q ss_pred CccceeeecC--CeEEEEeecCCC--CCCCCcEEEecCCCCChhcHHHHH---H-------------hh-------cCCc
Q 013006 134 ITSCFWEWKP--KFNVHYEKAGCE--NVNSPPVLFLPGFGVGSFHYEKQL---K-------------DL-------GKDY 186 (451)
Q Consensus 134 ~~~~~~~~~~--g~~l~y~~~g~~--~~~~p~VlllHG~~~~~~~~~~~~---~-------------~L-------~~~~ 186 (451)
..+.+++..+ +..++|...... ..+.|.||.+.|.++.+..+-.+. + .| .+..
T Consensus 37 ~~sGy~~v~~~~~~~lfy~f~es~~~~~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~a 116 (433)
T PLN03016 37 LETGYIGIGEDENVQFFYYFIKSENNPKEDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTKMA 116 (433)
T ss_pred EEEEEEEecCCCCeEEEEEEEecCCCcccCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccCCCCCceeeCCCchhhcC
Confidence 4456666644 577888765432 235699999999988887542211 0 11 1247
Q ss_pred eEEEEc-CCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHh---CCCCEEEEE
Q 013006 187 RAWAID-FLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEV---IREPVYVVG 262 (451)
Q Consensus 187 ~Vi~~D-~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l---~~~~v~lvG 262 (451)
+|+.+| .-|.|.|....... .. .+ ..+.+++.+.+..+++.. ...+++|.|
T Consensus 117 nllfiDqPvGtGfSy~~~~~~-~~-----------------------~d-~~~a~~~~~fl~~f~~~~p~~~~~~~yi~G 171 (433)
T PLN03016 117 NIIFLDQPVGSGFSYSKTPID-KT-----------------------GD-ISEVKRTHEFLQKWLSRHPQYFSNPLYVVG 171 (433)
T ss_pred cEEEecCCCCCCccCCCCCCC-cc-----------------------CC-HHHHHHHHHHHHHHHHhChhhcCCCEEEEc
Confidence 899999 55899985322110 00 00 012234445555555443 346899999
Q ss_pred eCcchHHHHHHHHh----C------CCccceEEEeccC
Q 013006 263 NSLGGFVAVYFAAC----N------PHLVKGVTLLNAT 290 (451)
Q Consensus 263 hS~GG~val~~A~~----~------P~~v~~lvl~~~~ 290 (451)
.|+||..+-.+|.. . +=.++++++-++.
T Consensus 172 ESYaG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~ 209 (433)
T PLN03016 172 DSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNPV 209 (433)
T ss_pred cCccceehHHHHHHHHhhcccccCCcccceeeEecCCC
Confidence 99999877666653 1 1257899988874
No 164
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=97.59 E-value=0.00018 Score=67.00 Aligned_cols=51 Identities=22% Similarity=0.450 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHHHh-CC--CCEEEEEeCcchHHHHHHHHhCCCccceEEEeccC
Q 013006 240 DLWQDQVCYFIKEV-IR--EPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNAT 290 (451)
Q Consensus 240 ~~~a~dv~~ll~~l-~~--~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~ 290 (451)
+.+.++|..+|++. .. ++..|+|+||||..|+.++.+||+.+.+++.+++.
T Consensus 96 ~~l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~ 149 (251)
T PF00756_consen 96 TFLTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGA 149 (251)
T ss_dssp HHHHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEE
T ss_pred eehhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCcc
Confidence 44556777776654 32 23799999999999999999999999999999975
No 165
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.51 E-value=0.00075 Score=69.70 Aligned_cols=100 Identities=22% Similarity=0.206 Sum_probs=59.0
Q ss_pred CCCCcEEEecCCCCChhcHHHHHHhhc-----------------CCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhh
Q 013006 157 VNSPPVLFLPGFGVGSFHYEKQLKDLG-----------------KDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKN 219 (451)
Q Consensus 157 ~~~p~VlllHG~~~~~~~~~~~~~~L~-----------------~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~ 219 (451)
.++-||||++|..++...-+.++..-. .+++..++|+=+
T Consensus 87 lsGIPVLFIPGNAGSyKQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnE------------------------ 142 (973)
T KOG3724|consen 87 LSGIPVLFIPGNAGSYKQVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNE------------------------ 142 (973)
T ss_pred CCCceEEEecCCCCchHHHHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccc------------------------
Confidence 457899999999998877665543322 124455555432
Q ss_pred ccccCCCCCCccccccccCHHHHHHHHHHHHH----HhCC---------CCEEEEEeCcchHHHHHHHHh---CCCccce
Q 013006 220 FLWGFGDKAQPWASELAYSVDLWQDQVCYFIK----EVIR---------EPVYVVGNSLGGFVAVYFAAC---NPHLVKG 283 (451)
Q Consensus 220 ~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~----~l~~---------~~v~lvGhS~GG~val~~A~~---~P~~v~~ 283 (451)
........++.++++-+.+.|+ .... ..|++|||||||.+|..++.. .+..|.-
T Consensus 143 ----------e~tAm~G~~l~dQtEYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVnt 212 (973)
T KOG3724|consen 143 ----------EFTAMHGHILLDQTEYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNT 212 (973)
T ss_pred ----------hhhhhccHhHHHHHHHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhh
Confidence 1111112455555554444443 2222 249999999999999876643 2445666
Q ss_pred EEEeccC
Q 013006 284 VTLLNAT 290 (451)
Q Consensus 284 lvl~~~~ 290 (451)
++..+++
T Consensus 213 IITlssP 219 (973)
T KOG3724|consen 213 IITLSSP 219 (973)
T ss_pred hhhhcCc
Confidence 6666654
No 166
>PLN02606 palmitoyl-protein thioesterase
Probab=97.51 E-value=0.0026 Score=59.60 Aligned_cols=97 Identities=22% Similarity=0.269 Sum_probs=63.7
Q ss_pred CCcEEEecCCC--CChhcHHHHHHhhc--CCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccc
Q 013006 159 SPPVLFLPGFG--VGSFHYEKQLKDLG--KDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASE 234 (451)
Q Consensus 159 ~p~VlllHG~~--~~~~~~~~~~~~L~--~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 234 (451)
..|||+.||++ .+...+..+.+.+. .++.+..+- .|-+... . +
T Consensus 26 ~~PvViwHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~-ig~~~~~---s----------------~------------- 72 (306)
T PLN02606 26 SVPFVLFHGFGGECSNGKVSNLTQFLINHSGYPGTCVE-IGNGVQD---S----------------L------------- 72 (306)
T ss_pred CCCEEEECCCCcccCCchHHHHHHHHHhCCCCCeEEEE-ECCCccc---c----------------c-------------
Confidence 46999999999 44556777777664 255444443 2322100 0 0
Q ss_pred cccCHHHHHHHHHHHHHH---hCCCCEEEEEeCcchHHHHHHHHhCCC--ccceEEEeccC
Q 013006 235 LAYSVDLWQDQVCYFIKE---VIREPVYVVGNSLGGFVAVYFAACNPH--LVKGVTLLNAT 290 (451)
Q Consensus 235 ~~~s~~~~a~dv~~ll~~---l~~~~v~lvGhS~GG~val~~A~~~P~--~v~~lvl~~~~ 290 (451)
...+.++++.+.+-+.. +. +=+++||+|.||.++-.++.+.|+ .|+.+|.+++.
T Consensus 73 -~~~~~~Qv~~vce~l~~~~~L~-~G~naIGfSQGglflRa~ierc~~~p~V~nlISlggp 131 (306)
T PLN02606 73 -FMPLRQQASIACEKIKQMKELS-EGYNIVAESQGNLVARGLIEFCDNAPPVINYVSLGGP 131 (306)
T ss_pred -ccCHHHHHHHHHHHHhcchhhc-CceEEEEEcchhHHHHHHHHHCCCCCCcceEEEecCC
Confidence 13455555555444433 22 349999999999999999999876 59999999975
No 167
>PLN02209 serine carboxypeptidase
Probab=97.48 E-value=0.039 Score=55.56 Aligned_cols=132 Identities=20% Similarity=0.268 Sum_probs=77.6
Q ss_pred CccceeeecC--CeEEEEeecCCC--CCCCCcEEEecCCCCChhcHHHHHH----------------hh-------cCCc
Q 013006 134 ITSCFWEWKP--KFNVHYEKAGCE--NVNSPPVLFLPGFGVGSFHYEKQLK----------------DL-------GKDY 186 (451)
Q Consensus 134 ~~~~~~~~~~--g~~l~y~~~g~~--~~~~p~VlllHG~~~~~~~~~~~~~----------------~L-------~~~~ 186 (451)
....+++..+ +..++|...... ..+.|.|+.+.|.++.+..+-.+.+ .| .+..
T Consensus 39 ~~sGy~~v~~~~~~~lf~~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~a 118 (437)
T PLN02209 39 LETGYIGIGEEENVQFFYYFIKSDKNPQEDPLIIWLNGGPGCSCLSGLFFENGPLALKNKVYNGSVPSLVSTTYSWTKTA 118 (437)
T ss_pred EEEEEEEecCCCCeEEEEEEEecCCCCCCCCEEEEECCCCcHHHhhhHHHhcCCceeccCCCCCCcccceeCCCchhhcC
Confidence 3455666643 567777665432 2346999999999988877533221 11 1236
Q ss_pred eEEEEc-CCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHh---CCCCEEEEE
Q 013006 187 RAWAID-FLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEV---IREPVYVVG 262 (451)
Q Consensus 187 ~Vi~~D-~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l---~~~~v~lvG 262 (451)
+++.+| ..|.|.|....... .. .+ .-+.+++.+.+..|++.. ...+++|.|
T Consensus 119 nllfiDqPvGtGfSy~~~~~~-~~-----------------------~~-~~~a~~~~~fl~~f~~~~p~~~~~~~yi~G 173 (437)
T PLN02209 119 NIIFLDQPVGSGFSYSKTPIE-RT-----------------------SD-TSEVKKIHEFLQKWLIKHPQFLSNPFYVVG 173 (437)
T ss_pred cEEEecCCCCCCccCCCCCCC-cc-----------------------CC-HHHHHHHHHHHHHHHHhCccccCCCEEEEe
Confidence 799999 55889885322110 00 00 012233344444444433 235899999
Q ss_pred eCcchHHHHHHHHh----C------CCccceEEEeccC
Q 013006 263 NSLGGFVAVYFAAC----N------PHLVKGVTLLNAT 290 (451)
Q Consensus 263 hS~GG~val~~A~~----~------P~~v~~lvl~~~~ 290 (451)
.|+||..+-.+|.. . +=.++++++.++.
T Consensus 174 ESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng~ 211 (437)
T PLN02209 174 DSYSGMIVPALVHEISKGNYICCNPPINLQGYVLGNPI 211 (437)
T ss_pred cCcCceehHHHHHHHHhhcccccCCceeeeeEEecCcc
Confidence 99999877666653 1 1257888888874
No 168
>COG3150 Predicted esterase [General function prediction only]
Probab=97.45 E-value=0.00046 Score=58.08 Aligned_cols=87 Identities=21% Similarity=0.306 Sum_probs=64.5
Q ss_pred EEEecCCCCChhcHHHHH--HhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccccCH
Q 013006 162 VLFLPGFGVGSFHYEKQL--KDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSV 239 (451)
Q Consensus 162 VlllHG~~~~~~~~~~~~--~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~ 239 (451)
||++|||..+......++ +.+.. |.|-.+.+.+... .++
T Consensus 2 ilYlHGFnSSP~shka~l~~q~~~~-------~~~~i~y~~p~l~--------------------------------h~p 42 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVLLLQFIDE-------DVRDIEYSTPHLP--------------------------------HDP 42 (191)
T ss_pred eEEEecCCCCcccHHHHHHHHHHhc-------cccceeeecCCCC--------------------------------CCH
Confidence 899999999887776543 33443 3333444443222 478
Q ss_pred HHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccC
Q 013006 240 DLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNAT 290 (451)
Q Consensus 240 ~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~ 290 (451)
...++.+..++..++.+...|+|-|+||+.|..++.++. +++ |++||+
T Consensus 43 ~~a~~ele~~i~~~~~~~p~ivGssLGGY~At~l~~~~G--ira-v~~NPa 90 (191)
T COG3150 43 QQALKELEKAVQELGDESPLIVGSSLGGYYATWLGFLCG--IRA-VVFNPA 90 (191)
T ss_pred HHHHHHHHHHHHHcCCCCceEEeecchHHHHHHHHHHhC--Chh-hhcCCC
Confidence 889999999999999888999999999999999999874 544 455664
No 169
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=97.44 E-value=0.00096 Score=66.32 Aligned_cols=51 Identities=25% Similarity=0.448 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHHHh---CCCCEEEEEeCcchHHHHHHHHhCCC------ccceEEEeccC
Q 013006 240 DLWQDQVCYFIKEV---IREPVYVVGNSLGGFVAVYFAACNPH------LVKGVTLLNAT 290 (451)
Q Consensus 240 ~~~a~dv~~ll~~l---~~~~v~lvGhS~GG~val~~A~~~P~------~v~~lvl~~~~ 290 (451)
+++...++.+++.. ..+||+||||||||.++..+....+. .|+++|.++++
T Consensus 100 ~~~~~~lk~~ie~~~~~~~~kv~li~HSmGgl~~~~fl~~~~~~~W~~~~i~~~i~i~~p 159 (389)
T PF02450_consen 100 DEYFTKLKQLIEEAYKKNGKKVVLIAHSMGGLVARYFLQWMPQEEWKDKYIKRFISIGTP 159 (389)
T ss_pred HHHHHHHHHHHHHHHHhcCCcEEEEEeCCCchHHHHHHHhccchhhHHhhhhEEEEeCCC
Confidence 35555566666544 35899999999999999999988753 59999999974
No 170
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=97.36 E-value=0.0016 Score=60.51 Aligned_cols=103 Identities=17% Similarity=0.197 Sum_probs=57.6
Q ss_pred CCCcEEEecCCCCCh---hcHHHHHHhh---cCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCcc
Q 013006 158 NSPPVLFLPGFGVGS---FHYEKQLKDL---GKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPW 231 (451)
Q Consensus 158 ~~p~VlllHG~~~~~---~~~~~~~~~L---~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~ 231 (451)
+-.|||+.||+|.+. ..+..+...+ -.|..|.+++. |-+.++ ...+.+|
T Consensus 4 ~~~PvViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~i-g~~~~~---------------D~~~s~f--------- 58 (279)
T PF02089_consen 4 SPLPVVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEI-GNDPSE---------------DVENSFF--------- 58 (279)
T ss_dssp SS--EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--S-SSSHHH---------------HHHHHHH---------
T ss_pred CCCcEEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEE-CCCcch---------------hhhhhHH---------
Confidence 346899999999753 3455444433 34677888876 222210 0112222
Q ss_pred ccccccCHHHHHHHHHHHHHHhCC--CCEEEEEeCcchHHHHHHHHhCCC-ccceEEEeccC
Q 013006 232 ASELAYSVDLWQDQVCYFIKEVIR--EPVYVVGNSLGGFVAVYFAACNPH-LVKGVTLLNAT 290 (451)
Q Consensus 232 ~~~~~~s~~~~a~dv~~ll~~l~~--~~v~lvGhS~GG~val~~A~~~P~-~v~~lvl~~~~ 290 (451)
..+.+.++.+.+.+..... +=+++||+|.||.++-.++.+.|+ .|+.+|.+++.
T Consensus 59 -----~~v~~Qv~~vc~~l~~~p~L~~G~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggp 115 (279)
T PF02089_consen 59 -----GNVNDQVEQVCEQLANDPELANGFNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGP 115 (279)
T ss_dssp -----SHHHHHHHHHHHHHHH-GGGTT-EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES--
T ss_pred -----HHHHHHHHHHHHHHhhChhhhcceeeeeeccccHHHHHHHHHCCCCCceeEEEecCc
Confidence 4567777777776665321 459999999999999999999864 69999999974
No 171
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=97.32 E-value=0.0069 Score=55.18 Aligned_cols=95 Identities=22% Similarity=0.266 Sum_probs=64.7
Q ss_pred CcEEEecCCCCChhc--HHHHHHhhcC--CceEEEEcCCCCC--CCCCCCCCCCCCCCCCchhhhhccccCCCCCCcccc
Q 013006 160 PPVLFLPGFGVGSFH--YEKQLKDLGK--DYRAWAIDFLGQG--MSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWAS 233 (451)
Q Consensus 160 p~VlllHG~~~~~~~--~~~~~~~L~~--~~~Vi~~D~rG~G--~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~ 233 (451)
.|+|++||++.+... ...+.+.+.+ +..|.+.|. |-| .|.
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~lei-g~g~~~s~--------------------------------- 69 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEI-GDGIKDSS--------------------------------- 69 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEe-cCCcchhh---------------------------------
Confidence 689999999988766 6666666654 678888885 444 111
Q ss_pred ccccCHHHHHHHHHHHHHHhC--CCCEEEEEeCcchHHHHHHHHhCCC-ccceEEEeccC
Q 013006 234 ELAYSVDLWQDQVCYFIKEVI--REPVYVVGNSLGGFVAVYFAACNPH-LVKGVTLLNAT 290 (451)
Q Consensus 234 ~~~~s~~~~a~dv~~ll~~l~--~~~v~lvGhS~GG~val~~A~~~P~-~v~~lvl~~~~ 290 (451)
...+.++++.+.+.+.... .+=+++||.|.||.++-.++..-++ .|+.+|.+++.
T Consensus 70 --l~pl~~Qv~~~ce~v~~m~~lsqGynivg~SQGglv~Raliq~cd~ppV~n~ISL~gP 127 (296)
T KOG2541|consen 70 --LMPLWEQVDVACEKVKQMPELSQGYNIVGYSQGGLVARALIQFCDNPPVKNFISLGGP 127 (296)
T ss_pred --hccHHHHHHHHHHHHhcchhccCceEEEEEccccHHHHHHHHhCCCCCcceeEeccCC
Confidence 1244455554444443221 1348999999999999888876543 69999999874
No 172
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=97.31 E-value=0.0016 Score=67.23 Aligned_cols=53 Identities=17% Similarity=0.117 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHHhCC--CCEEEEEeCcchHHHHHHHHh--CCCccceEEEeccCCC
Q 013006 240 DLWQDQVCYFIKEVIR--EPVYVVGNSLGGFVAVYFAAC--NPHLVKGVTLLNATPF 292 (451)
Q Consensus 240 ~~~a~dv~~ll~~l~~--~~v~lvGhS~GG~val~~A~~--~P~~v~~lvl~~~~~~ 292 (451)
....+.|++-++..+. ++|+|+|+|.||..+..++.. .+.+++++|++++...
T Consensus 158 ~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~ 214 (493)
T cd00312 158 RLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSAL 214 (493)
T ss_pred HHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCcc
Confidence 3333444444555554 579999999999998887775 3457999999987643
No 173
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=97.29 E-value=0.0033 Score=61.19 Aligned_cols=47 Identities=17% Similarity=0.152 Sum_probs=41.6
Q ss_pred cCCCCCEEEEeeCCCCCCChHHHHHHHHHCCC-CcEEEeCCCCCCccc
Q 013006 394 QMNGVPICLIYGKEDPWVKPVWGLQVKRQVPE-APYYEISPAGHCPHD 440 (451)
Q Consensus 394 ~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~-~~~~~i~~~gH~~~~ 440 (451)
.++++|.++|.|..|++..+.....+...+|+ ..+..+|+++|..-.
T Consensus 259 ~rL~~PK~ii~atgDeFf~pD~~~~y~d~L~G~K~lr~vPN~~H~~~~ 306 (367)
T PF10142_consen 259 DRLTMPKYIINATGDEFFVPDSSNFYYDKLPGEKYLRYVPNAGHSLIG 306 (367)
T ss_pred HhcCccEEEEecCCCceeccCchHHHHhhCCCCeeEEeCCCCCcccch
Confidence 45699999999999999999999999999997 457799999998765
No 174
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=97.23 E-value=0.00059 Score=54.07 Aligned_cols=44 Identities=20% Similarity=0.267 Sum_probs=42.1
Q ss_pred CCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccc
Q 013006 397 GVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHD 440 (451)
Q Consensus 397 ~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~ 440 (451)
..|+|+|.++.|+.+|.+.++.+++.+++++++.+++.||..+.
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~~s~lvt~~g~gHg~~~ 77 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLPGSRLVTVDGAGHGVYA 77 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCCCceEEEEeccCcceec
Confidence 58999999999999999999999999999999999999999885
No 175
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=97.20 E-value=0.0014 Score=66.02 Aligned_cols=136 Identities=15% Similarity=0.046 Sum_probs=83.9
Q ss_pred CCCCccceeeecCCeEEEEeecCC---CCCCCCcEEEecCCCCCh--hcHHHHH-HhhcCCceEEEEcCCCCCCCCCCCC
Q 013006 131 GAPITSCFWEWKPKFNVHYEKAGC---ENVNSPPVLFLPGFGVGS--FHYEKQL-KDLGKDYRAWAIDFLGQGMSLPDED 204 (451)
Q Consensus 131 ~~~~~~~~~~~~~g~~l~y~~~g~---~~~~~p~VlllHG~~~~~--~~~~~~~-~~L~~~~~Vi~~D~rG~G~S~~~~~ 204 (451)
+..+...+.+.+||.+|+|...+. .+ +.|++|+--|...-+ -.|.... ..|.+|...+..+.||=|.=.+.=+
T Consensus 391 ~~~veQ~~atSkDGT~IPYFiv~K~~~~d-~~pTll~aYGGF~vsltP~fs~~~~~WLerGg~~v~ANIRGGGEfGp~WH 469 (648)
T COG1505 391 NYEVEQFFATSKDGTRIPYFIVRKGAKKD-ENPTLLYAYGGFNISLTPRFSGSRKLWLERGGVFVLANIRGGGEFGPEWH 469 (648)
T ss_pred CceEEEEEEEcCCCccccEEEEecCCcCC-CCceEEEeccccccccCCccchhhHHHHhcCCeEEEEecccCCccCHHHH
Confidence 334455556668999999998851 23 467776665432222 2355544 3357888888899999776532100
Q ss_pred CCCCCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHh--CCCCEEEEEeCcchHHHHHHHHhCCCccc
Q 013006 205 PTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEV--IREPVYVVGNSLGGFVAVYFAACNPHLVK 282 (451)
Q Consensus 205 ~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l--~~~~v~lvGhS~GG~val~~A~~~P~~v~ 282 (451)
.. .......-.++|+++....++++- ..+++.+.|-|-||.++-....++|+.+.
T Consensus 470 ~A-----------------------a~k~nrq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQrPelfg 526 (648)
T COG1505 470 QA-----------------------GMKENKQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPELFG 526 (648)
T ss_pred HH-----------------------HhhhcchhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccChhhhC
Confidence 00 000001124455555444444432 12578999999999999888899999998
Q ss_pred eEEEeccC
Q 013006 283 GVTLLNAT 290 (451)
Q Consensus 283 ~lvl~~~~ 290 (451)
++|+--|.
T Consensus 527 A~v~evPl 534 (648)
T COG1505 527 AAVCEVPL 534 (648)
T ss_pred ceeeccch
Confidence 88877664
No 176
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=97.18 E-value=0.18 Score=50.63 Aligned_cols=132 Identities=21% Similarity=0.200 Sum_probs=80.7
Q ss_pred ccceeeec--CCeEEEEeecCCC-C-CCCCcEEEecCCCCChhcHHHHHHhhc-------------------CCceEEEE
Q 013006 135 TSCFWEWK--PKFNVHYEKAGCE-N-VNSPPVLFLPGFGVGSFHYEKQLKDLG-------------------KDYRAWAI 191 (451)
Q Consensus 135 ~~~~~~~~--~g~~l~y~~~g~~-~-~~~p~VlllHG~~~~~~~~~~~~~~L~-------------------~~~~Vi~~ 191 (451)
.+.+++.. .+..|+|...... + ...|.||.+.|.++.+..- .++.++. +-..++.+
T Consensus 45 ysGYv~v~~~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl~-G~~~E~GPf~v~~~G~tL~~N~ySWnk~aNiLfL 123 (454)
T KOG1282|consen 45 YSGYVTVNESEGRQLFYWFFESENNPETDPLVLWLNGGPGCSSLG-GLFEENGPFRVKYNGKTLYLNPYSWNKEANILFL 123 (454)
T ss_pred ccceEECCCCCCceEEEEEEEccCCCCCCCEEEEeCCCCCccchh-hhhhhcCCeEEcCCCCcceeCCccccccccEEEE
Confidence 34566655 6899999866542 2 2468999999998888665 4444331 12468889
Q ss_pred cCC-CCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHh---CCCCEEEEEeCcch
Q 013006 192 DFL-GQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEV---IREPVYVVGNSLGG 267 (451)
Q Consensus 192 D~r-G~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l---~~~~v~lvGhS~GG 267 (451)
|.| |.|.|-........ -+| ..+..+.-+.+..++++. ...+++|.|-|++|
T Consensus 124 d~PvGvGFSYs~~~~~~~---------------~~D---------~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG 179 (454)
T KOG1282|consen 124 DQPVGVGFSYSNTSSDYK---------------TGD---------DGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAG 179 (454)
T ss_pred ecCCcCCccccCCCCcCc---------------CCc---------HHHHHHHHHHHHHHHHhChhhcCCCeEEecccccc
Confidence 988 77777432211000 000 023344444455555543 34789999999999
Q ss_pred HHHHHHHHh----C-----C-CccceEEEeccCC
Q 013006 268 FVAVYFAAC----N-----P-HLVKGVTLLNATP 291 (451)
Q Consensus 268 ~val~~A~~----~-----P-~~v~~lvl~~~~~ 291 (451)
...-.+|.. + | -.++|+++=++..
T Consensus 180 ~YVP~La~~I~~~N~~~~~~~iNLkG~~IGNg~t 213 (454)
T KOG1282|consen 180 HYVPALAQEILKGNKKCCKPNINLKGYAIGNGLT 213 (454)
T ss_pred eehHHHHHHHHhccccccCCcccceEEEecCccc
Confidence 777766653 2 1 2578888887753
No 177
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.15 E-value=0.0052 Score=55.70 Aligned_cols=50 Identities=14% Similarity=0.163 Sum_probs=40.0
Q ss_pred EEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCC-ccccChHHHHhhh
Q 013006 400 ICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHC-PHDEVPEVCSLCL 450 (451)
Q Consensus 400 vLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~-~~~e~p~~v~~~I 450 (451)
+.++.+++|..+|......+.+..|++++..++ +||. ..+-+-+++...|
T Consensus 309 ~ivv~A~~D~Yipr~gv~~lQ~~WPg~eVr~~e-gGHVsayl~k~dlfRR~I 359 (371)
T KOG1551|consen 309 IIVVQAKEDAYIPRTGVRSLQEIWPGCEVRYLE-GGHVSAYLFKQDLFRRAI 359 (371)
T ss_pred EEEEEecCCccccccCcHHHHHhCCCCEEEEee-cCceeeeehhchHHHHHH
Confidence 567789999999998889999999999999998 6896 4445556655544
No 178
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.15 E-value=0.0019 Score=62.20 Aligned_cols=110 Identities=21% Similarity=0.230 Sum_probs=78.4
Q ss_pred CcEEEecCCCCChhcHHH---HHHhhcC--CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccc
Q 013006 160 PPVLFLPGFGVGSFHYEK---QLKDLGK--DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASE 234 (451)
Q Consensus 160 p~VlllHG~~~~~~~~~~---~~~~L~~--~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 234 (451)
-||+|--|.-++.+.+.. ++-+++. +--+|....|-+|+|.+-...+- .+.. ..
T Consensus 81 gPIffYtGNEGdie~Fa~ntGFm~D~Ap~~~AllVFaEHRyYGeS~PFG~~s~---------k~~~------------hl 139 (492)
T KOG2183|consen 81 GPIFFYTGNEGDIEWFANNTGFMWDLAPELKALLVFAEHRYYGESLPFGSQSY---------KDAR------------HL 139 (492)
T ss_pred CceEEEeCCcccHHHHHhccchHHhhhHhhCceEEEeehhccccCCCCcchhc---------cChh------------hh
Confidence 589999999888776643 4445543 45689999999999976533210 0001 11
Q ss_pred cccCHHHHHHHHHHHHHHhCC------CCEEEEEeCcchHHHHHHHHhCCCccceEEEeccC
Q 013006 235 LAYSVDLWQDQVCYFIKEVIR------EPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNAT 290 (451)
Q Consensus 235 ~~~s~~~~a~dv~~ll~~l~~------~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~ 290 (451)
...+.++..+|...++.++.- .+|+.+|-|+|||++..+=.+||+.|.|...-+++
T Consensus 140 gyLtseQALADfA~ll~~lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSAP 201 (492)
T KOG2183|consen 140 GYLTSEQALADFAELLTFLKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASAP 201 (492)
T ss_pred ccccHHHHHHHHHHHHHHHhhccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccCc
Confidence 125677777777777777642 47999999999999999999999988887766553
No 179
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=97.09 E-value=0.14 Score=49.16 Aligned_cols=45 Identities=20% Similarity=0.289 Sum_probs=36.0
Q ss_pred HHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCC-ccceEEEeccC
Q 013006 246 VCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPH-LVKGVTLLNAT 290 (451)
Q Consensus 246 v~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~-~v~~lvl~~~~ 290 (451)
+..++...+.++++||||+.|+..++.+.+..+. .++++|++++-
T Consensus 183 a~~~~~~~~~~~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I~a~ 228 (310)
T PF12048_consen 183 AIAFAQQQGGKNIVLIGHGTGAGWAARYLAEKPPPMPDALVLINAY 228 (310)
T ss_pred HHHHHHhcCCceEEEEEeChhHHHHHHHHhcCCCcccCeEEEEeCC
Confidence 3344444566779999999999999999998764 59999999984
No 180
>PLN02633 palmitoyl protein thioesterase family protein
Probab=96.94 E-value=0.023 Score=53.43 Aligned_cols=98 Identities=18% Similarity=0.234 Sum_probs=62.7
Q ss_pred CCcEEEecCCCCChhc--HHHHHHhhc--CCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccc
Q 013006 159 SPPVLFLPGFGVGSFH--YEKQLKDLG--KDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASE 234 (451)
Q Consensus 159 ~p~VlllHG~~~~~~~--~~~~~~~L~--~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 234 (451)
..|+|+.||+|.+... ...+.+.+. .|..|.++.. |.+. ...
T Consensus 25 ~~P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i---g~~~--~~s----------------------------- 70 (314)
T PLN02633 25 SVPFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI---GNGV--GDS----------------------------- 70 (314)
T ss_pred CCCeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEE---CCCc--ccc-----------------------------
Confidence 4689999999877543 333444442 2455555543 2221 110
Q ss_pred cccCHHHHHHHHHHHHHHhCC--CCEEEEEeCcchHHHHHHHHhCCC--ccceEEEeccC
Q 013006 235 LAYSVDLWQDQVCYFIKEVIR--EPVYVVGNSLGGFVAVYFAACNPH--LVKGVTLLNAT 290 (451)
Q Consensus 235 ~~~s~~~~a~dv~~ll~~l~~--~~v~lvGhS~GG~val~~A~~~P~--~v~~lvl~~~~ 290 (451)
+...+.++++.+.+-+..... +=+++||+|.||.++-.++.+.|+ .|+.+|.+++.
T Consensus 71 ~~~~~~~Qve~vce~l~~~~~l~~G~naIGfSQGGlflRa~ierc~~~p~V~nlISlggp 130 (314)
T PLN02633 71 WLMPLTQQAEIACEKVKQMKELSQGYNIVGRSQGNLVARGLIEFCDGGPPVYNYISLAGP 130 (314)
T ss_pred ceeCHHHHHHHHHHHHhhchhhhCcEEEEEEccchHHHHHHHHHCCCCCCcceEEEecCC
Confidence 113555555555544443211 349999999999999999999886 59999999975
No 181
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=96.85 E-value=0.0075 Score=58.57 Aligned_cols=104 Identities=16% Similarity=0.193 Sum_probs=69.5
Q ss_pred CCCcEEEecCCCCChhcHHHHHHh------hcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCcc
Q 013006 158 NSPPVLFLPGFGVGSFHYEKQLKD------LGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPW 231 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~~~~~~~~------L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~ 231 (451)
+.|.|+++||.|-.......++.. +-+...+++.|+.-...-. .....
T Consensus 121 ~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~~~SILvLDYsLt~~~~-~~~~y------------------------- 174 (374)
T PF10340_consen 121 SDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLPEVSILVLDYSLTSSDE-HGHKY------------------------- 174 (374)
T ss_pred CCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcCCCeEEEEecccccccc-CCCcC-------------------------
Confidence 469999999987544433322222 2225688888886543100 01111
Q ss_pred ccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHh--CC---CccceEEEeccCC
Q 013006 232 ASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAAC--NP---HLVKGVTLLNATP 291 (451)
Q Consensus 232 ~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~--~P---~~v~~lvl~~~~~ 291 (451)
...+.+.++-...+++..+.+.++|+|-|.||.+++.+... ++ ..-+++||++|-.
T Consensus 175 ----PtQL~qlv~~Y~~Lv~~~G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv 235 (374)
T PF10340_consen 175 ----PTQLRQLVATYDYLVESEGNKNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWV 235 (374)
T ss_pred ----chHHHHHHHHHHHHHhccCCCeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCc
Confidence 15777888888888877888999999999999999877653 21 1358999999843
No 182
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=96.84 E-value=0.0079 Score=58.60 Aligned_cols=35 Identities=31% Similarity=0.443 Sum_probs=31.3
Q ss_pred CCEEEEEeCcchHHHHHHHHhCCCccceEEEeccC
Q 013006 256 EPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNAT 290 (451)
Q Consensus 256 ~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~ 290 (451)
-|++++|+|.||++|...|.-.|..+.+++=-++.
T Consensus 184 lp~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~ 218 (403)
T PF11144_consen 184 LPKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSY 218 (403)
T ss_pred CcEEEEecCcHHHHHHHHHhhCccceeEEEecCcc
Confidence 38999999999999999999999999998877664
No 183
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=96.75 E-value=0.1 Score=48.25 Aligned_cols=102 Identities=14% Similarity=0.133 Sum_probs=74.2
Q ss_pred CCcEEEecCCCCC-hhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCcccccccc
Q 013006 159 SPPVLFLPGFGVG-SFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAY 237 (451)
Q Consensus 159 ~p~VlllHG~~~~-~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 237 (451)
.|.||++-.+.++ +...+..++.|-....|+..||-....-..... .+
T Consensus 103 dPkvLivapmsGH~aTLLR~TV~alLp~~~vyitDW~dAr~Vp~~~G-------------------------------~F 151 (415)
T COG4553 103 DPKVLIVAPMSGHYATLLRGTVEALLPYHDVYITDWVDARMVPLEAG-------------------------------HF 151 (415)
T ss_pred CCeEEEEecccccHHHHHHHHHHHhccccceeEeeccccceeecccC-------------------------------Cc
Confidence 4677777776555 444567777887788999999876544322221 27
Q ss_pred CHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHH-----HHhCCCccceEEEeccCCC
Q 013006 238 SVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYF-----AACNPHLVKGVTLLNATPF 292 (451)
Q Consensus 238 s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~-----A~~~P~~v~~lvl~~~~~~ 292 (451)
+++++++-+.++++.+|.+ +++++.+.-+.-.+.. +...|..-..+++++++..
T Consensus 152 dldDYIdyvie~~~~~Gp~-~hv~aVCQP~vPvLAAisLM~~~~~p~~PssMtlmGgPID 210 (415)
T COG4553 152 DLDDYIDYVIEMINFLGPD-AHVMAVCQPTVPVLAAISLMEEDGDPNVPSSMTLMGGPID 210 (415)
T ss_pred cHHHHHHHHHHHHHHhCCC-CcEEEEecCCchHHHHHHHHHhcCCCCCCceeeeecCccc
Confidence 9999999999999999966 8899988877554443 3346778899999987643
No 184
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=96.67 E-value=0.055 Score=51.00 Aligned_cols=50 Identities=18% Similarity=0.176 Sum_probs=40.4
Q ss_pred cCCC-CCEEEEeeCCCCCCChHHHHHHHHHCCC--CcEEEeCCCCCCccccCh
Q 013006 394 QMNG-VPICLIYGKEDPWVKPVWGLQVKRQVPE--APYYEISPAGHCPHDEVP 443 (451)
Q Consensus 394 ~~i~-~PvLii~G~~D~~v~~~~~~~l~~~lp~--~~~~~i~~~gH~~~~e~p 443 (451)
.++. +|+|+++|.+|..+|...+..+...... .+...+++++|......+
T Consensus 228 ~~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~ 280 (299)
T COG1073 228 EKISPRPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDNP 280 (299)
T ss_pred hhcCCcceEEEecCCCcccchhhhHHHHhhhccCCceEEEecCCccccccCcc
Confidence 3444 8999999999999999999888887766 467788899998776443
No 185
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=96.57 E-value=0.05 Score=50.85 Aligned_cols=36 Identities=25% Similarity=0.382 Sum_probs=33.0
Q ss_pred CCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCC
Q 013006 256 EPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATP 291 (451)
Q Consensus 256 ~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~ 291 (451)
+.-+|+|-|+||.+++..+..||+++-.++..++..
T Consensus 177 ~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~ 212 (299)
T COG2382 177 DGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSF 212 (299)
T ss_pred CCcEEeccccccHHHHHHHhcCchhhceeeccCCcc
Confidence 457899999999999999999999999999999864
No 186
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=96.49 E-value=0.0048 Score=43.75 Aligned_cols=45 Identities=20% Similarity=0.223 Sum_probs=25.8
Q ss_pred CCCCccceeeecCCeEEEEeecCCC------CCCCCcEEEecCCCCChhcH
Q 013006 131 GAPITSCFWEWKPKFNVHYEKAGCE------NVNSPPVLFLPGFGVGSFHY 175 (451)
Q Consensus 131 ~~~~~~~~~~~~~g~~l~y~~~g~~------~~~~p~VlllHG~~~~~~~~ 175 (451)
|.+.....+++.||.-|....-... .+.+|+|+|.||+..++..|
T Consensus 9 GY~~E~h~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~~w 59 (63)
T PF04083_consen 9 GYPCEEHEVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSDDW 59 (63)
T ss_dssp T---EEEEEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GGGG
T ss_pred CCCcEEEEEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccChHHH
Confidence 5667788888999977766544332 34678999999999999988
No 187
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.49 E-value=0.0062 Score=52.02 Aligned_cols=52 Identities=19% Similarity=0.110 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHHHh----CCCCEEEEEeCcchHHHHHHHHhCCC----ccceEEEeccC
Q 013006 239 VDLWQDQVCYFIKEV----IREPVYVVGNSLGGFVAVYFAACNPH----LVKGVTLLNAT 290 (451)
Q Consensus 239 ~~~~a~dv~~ll~~l----~~~~v~lvGhS~GG~val~~A~~~P~----~v~~lvl~~~~ 290 (451)
...+...+...++.. ...+++++|||+||.+|..++...+. .+..++.++++
T Consensus 7 ~~~~~~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p 66 (153)
T cd00741 7 ARSLANLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPP 66 (153)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCC
Confidence 344455555555443 56889999999999999999887654 56777777765
No 188
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=96.46 E-value=0.051 Score=50.01 Aligned_cols=51 Identities=22% Similarity=0.404 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHH-h--CCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccC
Q 013006 240 DLWQDQVCYFIKE-V--IREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNAT 290 (451)
Q Consensus 240 ~~~a~dv~~ll~~-l--~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~ 290 (451)
+.+.++++-++++ + ..++..|+|||+||.+++.....+|+.+...++++|.
T Consensus 118 ~fL~~~lkP~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPS 171 (264)
T COG2819 118 EFLTEQLKPFIEARYRTNSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPS 171 (264)
T ss_pred HHHHHhhHHHHhcccccCcccceeeeecchhHHHHHHHhcCcchhceeeeecch
Confidence 4455666666766 2 3467899999999999999999999999999999986
No 189
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=96.43 E-value=0.041 Score=54.81 Aligned_cols=129 Identities=12% Similarity=0.001 Sum_probs=71.4
Q ss_pred CCeEEEEeecCCCCCCCCcEEEecCCC---CChhcHHHHHHhhc-CC-ceEEEEcCCC--CCCCCCCCCCCCCCCCCCch
Q 013006 143 PKFNVHYEKAGCENVNSPPVLFLPGFG---VGSFHYEKQLKDLG-KD-YRAWAIDFLG--QGMSLPDEDPTPRSKEGDST 215 (451)
Q Consensus 143 ~g~~l~y~~~g~~~~~~p~VlllHG~~---~~~~~~~~~~~~L~-~~-~~Vi~~D~rG--~G~S~~~~~~~~~~~~~~~~ 215 (451)
|.+.|....--....+.|++|+|||.+ ++......--..|+ ++ .-|+.+++|= .|.=..+.-....
T Consensus 78 DCL~LNIwaP~~~a~~~PVmV~IHGG~y~~Gs~s~~~ydgs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~------- 150 (491)
T COG2272 78 DCLYLNIWAPEVPAEKLPVMVYIHGGGYIMGSGSEPLYDGSALAARGDVVVVSVNYRLGALGFLDLSSLDTED------- 150 (491)
T ss_pred cceeEEeeccCCCCCCCcEEEEEeccccccCCCcccccChHHHHhcCCEEEEEeCcccccceeeehhhccccc-------
Confidence 455666554441122459999999963 33333222234554 34 7778888771 2221111000000
Q ss_pred hhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCC--CEEEEEeCcchHHHHHHHHh--CCCccceEEEeccCC
Q 013006 216 EEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIRE--PVYVVGNSLGGFVAVYFAAC--NPHLVKGVTLLNATP 291 (451)
Q Consensus 216 ~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~--~v~lvGhS~GG~val~~A~~--~P~~v~~lvl~~~~~ 291 (451)
+. ..+....+.-.-.+.+++-|++.|.+ .|.|+|+|-|++.++.+.+. ....++++|+.++..
T Consensus 151 -~~------------~~n~Gl~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~P~AkGLF~rAi~~Sg~~ 217 (491)
T COG2272 151 -AF------------ASNLGLLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAVPSAKGLFHRAIALSGAA 217 (491)
T ss_pred -cc------------cccccHHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcCccchHHHHHHHHhCCCC
Confidence 00 00001123333445666778888774 59999999999988877654 234788888888753
No 190
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=96.41 E-value=0.065 Score=54.77 Aligned_cols=128 Identities=16% Similarity=0.152 Sum_probs=80.5
Q ss_pred CCccceeeecCCeEEE----EeecCCCCCCCCcEEEecCCCCChhcHHHHH----Hhh-cCCceEEEEcCCCCCCCCCCC
Q 013006 133 PITSCFWEWKPKFNVH----YEKAGCENVNSPPVLFLPGFGVGSFHYEKQL----KDL-GKDYRAWAIDFLGQGMSLPDE 203 (451)
Q Consensus 133 ~~~~~~~~~~~g~~l~----y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~----~~L-~~~~~Vi~~D~rG~G~S~~~~ 203 (451)
++...++..+||..+. |...-..+.+.|.+|..+| +-..+..+.+ ..| .+|+-....|.||=|.=..
T Consensus 440 ~~~r~~~~SkDGt~VPM~Iv~kk~~k~dg~~P~LLygYG--ay~isl~p~f~~srl~lld~G~Vla~a~VRGGGe~G~-- 515 (712)
T KOG2237|consen 440 VVERIEVSSKDGTKVPMFIVYKKDIKLDGSKPLLLYGYG--AYGISLDPSFRASRLSLLDRGWVLAYANVRGGGEYGE-- 515 (712)
T ss_pred EEEEEEEecCCCCccceEEEEechhhhcCCCceEEEEec--ccceeeccccccceeEEEecceEEEEEeeccCccccc--
Confidence 3444555567886543 3222222224565555555 3333322221 122 4567777779999775431
Q ss_pred CCCCCCCCCCchhhhhccccCCCCCCccccc-----cccCHHHHHHHHHHHHHHh--CCCCEEEEEeCcchHHHHHHHHh
Q 013006 204 DPTPRSKEGDSTEEKNFLWGFGDKAQPWASE-----LAYSVDLWQDQVCYFIKEV--IREPVYVVGNSLGGFVAVYFAAC 276 (451)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~-----~~~s~~~~a~dv~~ll~~l--~~~~v~lvGhS~GG~val~~A~~ 276 (451)
.|++. ..-+++|++..++.+++.- ..++..+.|.|.||.++..++.+
T Consensus 516 --------------------------~WHk~G~lakKqN~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~ 569 (712)
T KOG2237|consen 516 --------------------------QWHKDGRLAKKQNSFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQ 569 (712)
T ss_pred --------------------------chhhccchhhhcccHHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhcc
Confidence 11111 1257888888888887653 34689999999999999999999
Q ss_pred CCCccceEEEeccC
Q 013006 277 NPHLVKGVTLLNAT 290 (451)
Q Consensus 277 ~P~~v~~lvl~~~~ 290 (451)
+|+++.++|+--|.
T Consensus 570 rPdLF~avia~Vpf 583 (712)
T KOG2237|consen 570 RPDLFGAVIAKVPF 583 (712)
T ss_pred CchHhhhhhhcCcc
Confidence 99999999987664
No 191
>COG0627 Predicted esterase [General function prediction only]
Probab=96.33 E-value=0.015 Score=55.61 Aligned_cols=35 Identities=23% Similarity=0.367 Sum_probs=32.6
Q ss_pred CEEEEEeCcchHHHHHHHHhCCCccceEEEeccCC
Q 013006 257 PVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATP 291 (451)
Q Consensus 257 ~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~ 291 (451)
...++||||||.=|+.+|++||++++.+..+++..
T Consensus 153 ~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~ 187 (316)
T COG0627 153 GRAIAGHSMGGYGALKLALKHPDRFKSASSFSGIL 187 (316)
T ss_pred CceeEEEeccchhhhhhhhhCcchhceeccccccc
Confidence 68899999999999999999999999999998753
No 192
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=96.30 E-value=0.094 Score=45.71 Aligned_cols=53 Identities=21% Similarity=0.192 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHHHHhC-----CCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCC
Q 013006 239 VDLWQDQVCYFIKEVI-----REPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATP 291 (451)
Q Consensus 239 ~~~~a~dv~~ll~~l~-----~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~ 291 (451)
-+.-+.++..|++.|. ...+.++|||+|+.++-..+...+..+..+|+++++.
T Consensus 87 A~~ga~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG 144 (177)
T PF06259_consen 87 ARAGAPRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPG 144 (177)
T ss_pred HHHHHHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCC
Confidence 3455667777776663 2468999999999999988877677899999999764
No 193
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=96.25 E-value=0.28 Score=47.41 Aligned_cols=53 Identities=17% Similarity=0.167 Sum_probs=39.5
Q ss_pred CCCEEEEeeCCCCCCChHHHHHHHHHCC------------------------C-CcEEEeCCCCCCccccChHHHHhhh
Q 013006 397 GVPICLIYGKEDPWVKPVWGLQVKRQVP------------------------E-APYYEISPAGHCPHDEVPEVCSLCL 450 (451)
Q Consensus 397 ~~PvLii~G~~D~~v~~~~~~~l~~~lp------------------------~-~~~~~i~~~gH~~~~e~p~~v~~~I 450 (451)
.++||+..|+.|.+++....+++.+.+. + ..+.++.+|||.++ .+|+...+.|
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~qP~~al~m~ 310 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMF 310 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-cCHHHHHHHH
Confidence 5899999999999999766666554432 1 45566779999997 5898876543
No 194
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=96.23 E-value=0.09 Score=54.08 Aligned_cols=54 Identities=19% Similarity=0.251 Sum_probs=47.0
Q ss_pred cCHHHHHHHHHHHHHHhC--CCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccC
Q 013006 237 YSVDLWQDQVCYFIKEVI--REPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNAT 290 (451)
Q Consensus 237 ~s~~~~a~dv~~ll~~l~--~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~ 290 (451)
-|+.|+++....+++.-- .+.++++|-|.||+++-..+.+.|++++++|+--|.
T Consensus 506 NTf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPF 561 (682)
T COG1770 506 NTFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPF 561 (682)
T ss_pred ccHHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhChhhhhheeecCCc
Confidence 589999999988887642 357999999999999999999999999999988764
No 195
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=96.19 E-value=0.038 Score=55.14 Aligned_cols=122 Identities=22% Similarity=0.162 Sum_probs=78.9
Q ss_pred EEEeecCCC-CCCCCcEEEecCCCCChhcHHHHHHh----h---------------cCCceEEEEc-CCCCCCCCCCCCC
Q 013006 147 VHYEKAGCE-NVNSPPVLFLPGFGVGSFHYEKQLKD----L---------------GKDYRAWAID-FLGQGMSLPDEDP 205 (451)
Q Consensus 147 l~y~~~g~~-~~~~p~VlllHG~~~~~~~~~~~~~~----L---------------~~~~~Vi~~D-~rG~G~S~~~~~~ 205 (451)
.+|...++. ..++|.|+.+.|.++++..|-.+... + -..-.++.+| .-|.|.|....+
T Consensus 88 ffy~fe~~ndp~~rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~adLvFiDqPvGTGfS~a~~~- 166 (498)
T COG2939 88 FFYTFESPNDPANRPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWLDFADLVFIDQPVGTGFSRALGD- 166 (498)
T ss_pred EEEEecCCCCCCCCceEEEecCCCChHhhhhhhhhcCCeeeeCCCCCCCCCCccccccCCceEEEecCcccCccccccc-
Confidence 344444432 23578999999999999888665321 1 1124799999 669999974221
Q ss_pred CCCCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCC--CCEEEEEeCcchHHHHHHHHhCCC---c
Q 013006 206 TPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIR--EPVYVVGNSLGGFVAVYFAACNPH---L 280 (451)
Q Consensus 206 ~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~--~~v~lvGhS~GG~val~~A~~~P~---~ 280 (451)
|..-.+|+++. +++.+.+-+.+.+.++.. .+.+|+|-|+||.-+-.+|...-+ .
T Consensus 167 ----------e~~~d~~~~~~-----------D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~ 225 (498)
T COG2939 167 ----------EKKKDFEGAGK-----------DVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIA 225 (498)
T ss_pred ----------ccccchhccch-----------hHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccc
Confidence 23444555543 445555555555555544 499999999999998888875433 3
Q ss_pred cceEEEeccC
Q 013006 281 VKGVTLLNAT 290 (451)
Q Consensus 281 v~~lvl~~~~ 290 (451)
.++++++.+.
T Consensus 226 ~~~~~nlssv 235 (498)
T COG2939 226 LNGNVNLSSV 235 (498)
T ss_pred cCCceEeeee
Confidence 6777777764
No 196
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=96.15 E-value=0.0098 Score=49.76 Aligned_cols=38 Identities=26% Similarity=0.292 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHh
Q 013006 239 VDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAAC 276 (451)
Q Consensus 239 ~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~ 276 (451)
.+.+.+.+..+++.....++++.|||+||.+|..++..
T Consensus 47 ~~~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~ 84 (140)
T PF01764_consen 47 YDQILDALKELVEKYPDYSIVITGHSLGGALASLAAAD 84 (140)
T ss_dssp HHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcccCccchhhccchHHHHHHHHHHh
Confidence 34556677776666666789999999999999988875
No 197
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=96.01 E-value=0.016 Score=59.07 Aligned_cols=51 Identities=20% Similarity=0.130 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHHh----CCCCEEEEEeCcchHHHHHHHHhCC---------------CccceEEEeccC
Q 013006 240 DLWQDQVCYFIKEV----IREPVYVVGNSLGGFVAVYFAACNP---------------HLVKGVTLLNAT 290 (451)
Q Consensus 240 ~~~a~dv~~ll~~l----~~~~v~lvGhS~GG~val~~A~~~P---------------~~v~~lvl~~~~ 290 (451)
+.+-..++.+|+.. +.+||+||||||||.+++.+..... ..|+++|.++++
T Consensus 193 d~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp 262 (642)
T PLN02517 193 DQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFMKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGP 262 (642)
T ss_pred hHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHHHhccccccccCCcchHHHHHHHHHheecccc
Confidence 45555566666543 3589999999999999999876321 258999999874
No 198
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=95.91 E-value=0.035 Score=53.96 Aligned_cols=102 Identities=22% Similarity=0.323 Sum_probs=79.2
Q ss_pred CCCcEEEecCCCCChhcHH-HHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccc
Q 013006 158 NSPPVLFLPGFGVGSFHYE-KQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELA 236 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~~~-~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 236 (451)
++|+|+..-|++....-.+ .....| +-+-+.+.+|-+|.|.+.+. .|..
T Consensus 62 drPtV~~T~GY~~~~~p~r~Ept~Ll--d~NQl~vEhRfF~~SrP~p~----------------DW~~------------ 111 (448)
T PF05576_consen 62 DRPTVLYTEGYNVSTSPRRSEPTQLL--DGNQLSVEHRFFGPSRPEPA----------------DWSY------------ 111 (448)
T ss_pred CCCeEEEecCcccccCccccchhHhh--ccceEEEEEeeccCCCCCCC----------------Cccc------------
Confidence 6799999999988654332 223333 35578899999999975432 2433
Q ss_pred cCHHHHHHHHHHHHHHhC---CCCEEEEEeCcchHHHHHHHHhCCCccceEEEecc
Q 013006 237 YSVDLWQDQVCYFIKEVI---REPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNA 289 (451)
Q Consensus 237 ~s~~~~a~dv~~ll~~l~---~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~ 289 (451)
.|+.+-++|.+.+++.+. ..+.+--|-|=||++++.+=.-||+.|.+.|---+
T Consensus 112 Lti~QAA~D~Hri~~A~K~iY~~kWISTG~SKGGmTa~y~rrFyP~DVD~tVaYVA 167 (448)
T PF05576_consen 112 LTIWQAASDQHRIVQAFKPIYPGKWISTGGSKGGMTAVYYRRFYPDDVDGTVAYVA 167 (448)
T ss_pred ccHhHhhHHHHHHHHHHHhhccCCceecCcCCCceeEEEEeeeCCCCCCeeeeeec
Confidence 799999999999998874 36788899999999999988889999999887654
No 199
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=95.72 E-value=0.018 Score=46.14 Aligned_cols=42 Identities=19% Similarity=0.344 Sum_probs=27.1
Q ss_pred eeeecCCeEEEEeecCCCCCCCCcEEEecCCCCChhcHHHHH
Q 013006 138 FWEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQL 179 (451)
Q Consensus 138 ~~~~~~g~~l~y~~~g~~~~~~p~VlllHG~~~~~~~~~~~~ 179 (451)
|.+.-+|+.||+....+.+++..||||+||++++-..|..++
T Consensus 71 f~t~I~g~~iHFih~rs~~~~aiPLll~HGWPgSf~Ef~~vI 112 (112)
T PF06441_consen 71 FKTEIDGLDIHFIHVRSKRPNAIPLLLLHGWPGSFLEFLKVI 112 (112)
T ss_dssp EEEEETTEEEEEEEE--S-TT-EEEEEE--SS--GGGGHHHH
T ss_pred eeEEEeeEEEEEEEeeCCCCCCeEEEEECCCCccHHhHHhhC
Confidence 444457999999988877778899999999999887776653
No 200
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=95.66 E-value=0.15 Score=55.66 Aligned_cols=96 Identities=20% Similarity=0.245 Sum_probs=67.8
Q ss_pred CCCCcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccc
Q 013006 157 VNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELA 236 (451)
Q Consensus 157 ~~~p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 236 (451)
.+.|+++|+|.+-+.......++..|. .|.||.-.-...|.
T Consensus 2121 se~~~~Ffv~pIEG~tt~l~~la~rle---------~PaYglQ~T~~vP~------------------------------ 2161 (2376)
T KOG1202|consen 2121 SEEPPLFFVHPIEGFTTALESLASRLE---------IPAYGLQCTEAVPL------------------------------ 2161 (2376)
T ss_pred ccCCceEEEeccccchHHHHHHHhhcC---------CcchhhhccccCCc------------------------------
Confidence 357899999999887777777776653 34455322111111
Q ss_pred cCHHHHHHHHHHHHHHhCC-CCEEEEEeCcchHHHHHHHHhC--CCccceEEEeccCC
Q 013006 237 YSVDLWQDQVCYFIKEVIR-EPVYVVGNSLGGFVAVYFAACN--PHLVKGVTLLNATP 291 (451)
Q Consensus 237 ~s~~~~a~dv~~ll~~l~~-~~v~lvGhS~GG~val~~A~~~--P~~v~~lvl~~~~~ 291 (451)
-++++.+.....-++.+.. .|..++|+|+|+.++..+|... .+....+|+++..|
T Consensus 2162 dSies~A~~yirqirkvQP~GPYrl~GYSyG~~l~f~ma~~Lqe~~~~~~lillDGsp 2219 (2376)
T KOG1202|consen 2162 DSIESLAAYYIRQIRKVQPEGPYRLAGYSYGACLAFEMASQLQEQQSPAPLILLDGSP 2219 (2376)
T ss_pred chHHHHHHHHHHHHHhcCCCCCeeeeccchhHHHHHHHHHHHHhhcCCCcEEEecCch
Confidence 4777777777666666654 6899999999999999999764 33466799999875
No 201
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=95.58 E-value=0.031 Score=50.91 Aligned_cols=49 Identities=24% Similarity=0.230 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhC----CCccceEEEeccCC
Q 013006 242 WQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACN----PHLVKGVTLLNATP 291 (451)
Q Consensus 242 ~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~----P~~v~~lvl~~~~~ 291 (451)
.++-+..+++... +++++.|||.||.+|...|... .++|.++...+++.
T Consensus 71 A~~yl~~~~~~~~-~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPG 123 (224)
T PF11187_consen 71 ALAYLKKIAKKYP-GKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPG 123 (224)
T ss_pred HHHHHHHHHHhCC-CCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCC
Confidence 3344444455444 3599999999999999999874 35899999999864
No 202
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.56 E-value=0.13 Score=45.27 Aligned_cols=43 Identities=23% Similarity=0.359 Sum_probs=34.7
Q ss_pred HHHHHhCCCCEEEEEeCcchHHHHHHHHhCCC--ccceEEEeccC
Q 013006 248 YFIKEVIREPVYVVGNSLGGFVAVYFAACNPH--LVKGVTLLNAT 290 (451)
Q Consensus 248 ~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~--~v~~lvl~~~~ 290 (451)
.++.-...+.+.+|.||+||...+.+..++|+ +|-++.+.+++
T Consensus 182 ~~v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~ 226 (297)
T KOG3967|consen 182 NIVLPAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSA 226 (297)
T ss_pred HHhcccCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeeccc
Confidence 34444456889999999999999999999985 67788887765
No 203
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=95.50 E-value=0.066 Score=55.64 Aligned_cols=121 Identities=14% Similarity=0.088 Sum_probs=63.1
Q ss_pred CCeEEEEeecCCCCC--CCCcEEEecCCCC---Ch--hcHHHHHHhhcCCceEEEEcCC----CCCCCCCCCCCCCCCCC
Q 013006 143 PKFNVHYEKAGCENV--NSPPVLFLPGFGV---GS--FHYEKQLKDLGKDYRAWAIDFL----GQGMSLPDEDPTPRSKE 211 (451)
Q Consensus 143 ~g~~l~y~~~g~~~~--~~p~VlllHG~~~---~~--~~~~~~~~~L~~~~~Vi~~D~r----G~G~S~~~~~~~~~~~~ 211 (451)
|=+.|....-..... +.|++|+|||.+. +. ..+....-...++.=|+.+++| |+-.+.....+
T Consensus 107 DCL~LnI~~P~~~~~~~~lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~------ 180 (535)
T PF00135_consen 107 DCLYLNIYTPSNASSNSKLPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGAFGFLSLGDLDAP------ 180 (535)
T ss_dssp ---EEEEEEETSSSSTTSEEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HHHHH-BSSSTTSH------
T ss_pred hHHHHhhhhccccccccccceEEEeecccccCCCcccccccccccccCCCEEEEEecccccccccccccccccC------
Confidence 335555554433222 3599999999642 22 2233222222457889999988 44333211110
Q ss_pred CCchhhhhccccCCCCCCccccccccCHHHHHHHH---HHHHHHhCC--CCEEEEEeCcchHHHHHHHHhC--CCccceE
Q 013006 212 GDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQV---CYFIKEVIR--EPVYVVGNSLGGFVAVYFAACN--PHLVKGV 284 (451)
Q Consensus 212 ~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv---~~ll~~l~~--~~v~lvGhS~GG~val~~A~~~--P~~v~~l 284 (451)
...+-+.|+...+ ++-|...|. ++|.|+|||-||..+..+...- ..+++++
T Consensus 181 ----------------------~gN~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~ra 238 (535)
T PF00135_consen 181 ----------------------SGNYGLLDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRA 238 (535)
T ss_dssp ----------------------BSTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEE
T ss_pred ----------------------chhhhhhhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeeccccccccccc
Confidence 0014455555444 444445555 5799999999998887666652 3589999
Q ss_pred EEeccCC
Q 013006 285 TLLNATP 291 (451)
Q Consensus 285 vl~~~~~ 291 (451)
|+.++.+
T Consensus 239 I~~SGs~ 245 (535)
T PF00135_consen 239 ILQSGSA 245 (535)
T ss_dssp EEES--T
T ss_pred ccccccc
Confidence 9999864
No 204
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=95.38 E-value=0.085 Score=52.48 Aligned_cols=109 Identities=20% Similarity=0.195 Sum_probs=79.3
Q ss_pred CCCcEEEecCCCCChhcHHH----HHHhhcC--CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCcc
Q 013006 158 NSPPVLFLPGFGVGSFHYEK----QLKDLGK--DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPW 231 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~~~~----~~~~L~~--~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~ 231 (451)
.+|..|+|-|=+.-...|.. ....+++ +-.|+...+|-+|.|.+......
T Consensus 85 ~gPiFLmIGGEgp~~~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st------------------------ 140 (514)
T KOG2182|consen 85 GGPIFLMIGGEGPESDKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLST------------------------ 140 (514)
T ss_pred CCceEEEEcCCCCCCCCccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcc------------------------
Confidence 56777777775544444522 2223333 57899999999999965544321
Q ss_pred ccccccCHHHHHHHHHHHHHHhCC-------CCEEEEEeCcchHHHHHHHHhCCCccceEEEeccC
Q 013006 232 ASELAYSVDLWQDQVCYFIKEVIR-------EPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNAT 290 (451)
Q Consensus 232 ~~~~~~s~~~~a~dv~~ll~~l~~-------~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~ 290 (451)
......+..+...|+..+|+++.. .|.+.+|.|+-|.++.-+=.++|+.+.+-|.-+++
T Consensus 141 ~nlk~LSs~QALaDla~fI~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSap 206 (514)
T KOG2182|consen 141 SNLKYLSSLQALADLAEFIKAMNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAP 206 (514)
T ss_pred cchhhhhHHHHHHHHHHHHHHHHhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeecccccc
Confidence 112236889999999999998743 28999999999999999999999999998877764
No 205
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=95.00 E-value=0.1 Score=50.56 Aligned_cols=84 Identities=18% Similarity=0.085 Sum_probs=60.3
Q ss_pred CcEEEecCCCCChhcHHHHHHhhcC-CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccccC
Q 013006 160 PPVLFLPGFGVGSFHYEKQLKDLGK-DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYS 238 (451)
Q Consensus 160 p~VlllHG~~~~~~~~~~~~~~L~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s 238 (451)
..-||..|=|+-.+.=..+...|++ |+.|+.+|-.=|=.|. .+
T Consensus 261 ~~av~~SGDGGWr~lDk~v~~~l~~~gvpVvGvdsLRYfW~~------------------------------------rt 304 (456)
T COG3946 261 TVAVFYSGDGGWRDLDKEVAEALQKQGVPVVGVDSLRYFWSE------------------------------------RT 304 (456)
T ss_pred eEEEEEecCCchhhhhHHHHHHHHHCCCceeeeehhhhhhcc------------------------------------CC
Confidence 3456666655533333455667754 7999999977665654 47
Q ss_pred HHHHHHHHHHHHHHh----CCCCEEEEEeCcchHHHHHHHHhCCC
Q 013006 239 VDLWQDQVCYFIKEV----IREPVYVVGNSLGGFVAVYFAACNPH 279 (451)
Q Consensus 239 ~~~~a~dv~~ll~~l----~~~~v~lvGhS~GG~val~~A~~~P~ 279 (451)
.+..++|+..+++.. +..++.|+|+|+|+=+.-....+.|.
T Consensus 305 Pe~~a~Dl~r~i~~y~~~w~~~~~~liGySfGADvlP~~~n~L~~ 349 (456)
T COG3946 305 PEQIAADLSRLIRFYARRWGAKRVLLIGYSFGADVLPFAYNRLPP 349 (456)
T ss_pred HHHHHHHHHHHHHHHHHhhCcceEEEEeecccchhhHHHHHhCCH
Confidence 788888888888776 56789999999999887766666553
No 206
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=94.92 E-value=0.043 Score=54.24 Aligned_cols=50 Identities=20% Similarity=0.297 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHH----HhCCCCEEEEEeCcchHHHHHHHHhCCC--------ccceEEEecc
Q 013006 240 DLWQDQVCYFIK----EVIREPVYVVGNSLGGFVAVYFAACNPH--------LVKGVTLLNA 289 (451)
Q Consensus 240 ~~~a~dv~~ll~----~l~~~~v~lvGhS~GG~val~~A~~~P~--------~v~~lvl~~~ 289 (451)
+++...++..+| .-+.+|++||+||||+.+.+++...+++ .+++++-+++
T Consensus 162 d~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~lyFl~w~~~~~~~W~~k~I~sfvnig~ 223 (473)
T KOG2369|consen 162 DQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVLYFLKWVEAEGPAWCDKYIKSFVNIGA 223 (473)
T ss_pred HHHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHHHHHhcccccchhHHHHHHHHHHccCc
Confidence 344444554444 4466999999999999999999998876 4677776665
No 207
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=94.81 E-value=0.04 Score=50.50 Aligned_cols=27 Identities=33% Similarity=0.424 Sum_probs=21.4
Q ss_pred HHHhCCCCEEEEEeCcchHHHHHHHHh
Q 013006 250 IKEVIREPVYVVGNSLGGFVAVYFAAC 276 (451)
Q Consensus 250 l~~l~~~~v~lvGhS~GG~val~~A~~ 276 (451)
+++....++++.|||+||.+|..++..
T Consensus 122 ~~~~p~~~i~vtGHSLGGaiA~l~a~~ 148 (229)
T cd00519 122 LKQYPDYKIIVTGHSLGGALASLLALD 148 (229)
T ss_pred HhhCCCceEEEEccCHHHHHHHHHHHH
Confidence 333345689999999999999988875
No 208
>PLN02162 triacylglycerol lipase
Probab=94.40 E-value=0.09 Score=52.33 Aligned_cols=38 Identities=21% Similarity=0.206 Sum_probs=30.0
Q ss_pred CHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHH
Q 013006 238 SVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAA 275 (451)
Q Consensus 238 s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~ 275 (451)
....+.+.+..++++....++++.|||+||.+|..+|+
T Consensus 260 ay~~I~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 260 AYYTIRQMLRDKLARNKNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred hHHHHHHHHHHHHHhCCCceEEEEecChHHHHHHHHHH
Confidence 34556667777777766678999999999999998765
No 209
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=94.27 E-value=0.25 Score=50.44 Aligned_cols=128 Identities=18% Similarity=0.169 Sum_probs=79.9
Q ss_pred EEEEeecCCCCCCCCcEEEecCCCCCh-hcHHH----HHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhc
Q 013006 146 NVHYEKAGCENVNSPPVLFLPGFGVGS-FHYEK----QLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNF 220 (451)
Q Consensus 146 ~l~y~~~g~~~~~~p~VlllHG~~~~~-~~~~~----~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~ 220 (451)
.|.++.+=|.+=++ -++.+-|.+... -.+.. +...|++||.++.-|- ||..+.... ..
T Consensus 16 ~i~fev~LP~~WNg-R~~~~GgGG~~G~i~~~~~~~~~~~~~~~G~A~~~TD~-Gh~~~~~~~---------------~~ 78 (474)
T PF07519_consen 16 NIRFEVWLPDNWNG-RFLQVGGGGFAGGINYADGKASMATALARGYATASTDS-GHQGSAGSD---------------DA 78 (474)
T ss_pred eEEEEEECChhhcc-CeEEECCCeeeCcccccccccccchhhhcCeEEEEecC-CCCCCcccc---------------cc
Confidence 56666665542223 355554433222 22333 4566888999999995 665543210 01
Q ss_pred cccCCCCCCccccccccCHHHHHHHHHHHHHHh---CCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCCC
Q 013006 221 LWGFGDKAQPWASELAYSVDLWQDQVCYFIKEV---IREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPF 292 (451)
Q Consensus 221 ~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l---~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~~ 292 (451)
.|+ .+.+.+.+....++.+++..-+++++.. ..+.-+..|.|.||.-++..|.+||+.+.+++.-+|+..
T Consensus 79 ~~~--~n~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~~AQryP~dfDGIlAgaPA~~ 151 (474)
T PF07519_consen 79 SFG--NNPEALLDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGLMAAQRYPEDFDGILAGAPAIN 151 (474)
T ss_pred ccc--CCHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHHHHHHhChhhcCeEEeCCchHH
Confidence 122 1222222222256666777777777765 335688999999999999999999999999999998743
No 210
>PLN00413 triacylglycerol lipase
Probab=93.93 E-value=0.13 Score=51.25 Aligned_cols=38 Identities=21% Similarity=0.273 Sum_probs=31.5
Q ss_pred CHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHH
Q 013006 238 SVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAA 275 (451)
Q Consensus 238 s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~ 275 (451)
....+.+.+..+++.....++++.|||+||++|..+|.
T Consensus 266 ayy~i~~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 266 AYYTILRHLKEIFDQNPTSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred hHHHHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHH
Confidence 34466778888888877788999999999999998875
No 211
>PLN02454 triacylglycerol lipase
Probab=93.92 E-value=0.082 Score=52.10 Aligned_cols=36 Identities=19% Similarity=0.203 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHhCCCC--EEEEEeCcchHHHHHHHHh
Q 013006 241 LWQDQVCYFIKEVIREP--VYVVGNSLGGFVAVYFAAC 276 (451)
Q Consensus 241 ~~a~dv~~ll~~l~~~~--v~lvGhS~GG~val~~A~~ 276 (451)
++...|..+++.....+ +++.|||+||.+|+.+|..
T Consensus 211 qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 211 QLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 34445555555554444 9999999999999988854
No 212
>PLN02571 triacylglycerol lipase
Probab=93.90 E-value=0.076 Score=52.36 Aligned_cols=37 Identities=24% Similarity=0.307 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHHHhCCC--CEEEEEeCcchHHHHHHHHh
Q 013006 240 DLWQDQVCYFIKEVIRE--PVYVVGNSLGGFVAVYFAAC 276 (451)
Q Consensus 240 ~~~a~dv~~ll~~l~~~--~v~lvGhS~GG~val~~A~~ 276 (451)
+++.++|..+++....+ ++++.||||||.+|+..|..
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 56677788888776543 68999999999999988864
No 213
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=93.63 E-value=0.13 Score=45.81 Aligned_cols=41 Identities=12% Similarity=0.211 Sum_probs=35.3
Q ss_pred cCHHHHHHHHHHHHHHhCC-CCEEEEEeCcchHHHHHHHHhC
Q 013006 237 YSVDLWQDQVCYFIKEVIR-EPVYVVGNSLGGFVAVYFAACN 277 (451)
Q Consensus 237 ~s~~~~a~dv~~ll~~l~~-~~v~lvGhS~GG~val~~A~~~ 277 (451)
....|..+....+|++.+. ++++|+|||.|+.+.+++...+
T Consensus 75 ~ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 75 LAYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred hhHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 5678888888889988854 6999999999999999998764
No 214
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=93.35 E-value=0.11 Score=49.73 Aligned_cols=46 Identities=11% Similarity=0.079 Sum_probs=39.8
Q ss_pred cCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCc-EEEeCCCCCCcc
Q 013006 394 QMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAP-YYEISPAGHCPH 439 (451)
Q Consensus 394 ~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~-~~~i~~~gH~~~ 439 (451)
.++..|-.++.+..|.+.++..+......+|+.+ +..+|+..|...
T Consensus 326 ~RLalpKyivnaSgDdff~pDsa~lYyd~LPG~kaLrmvPN~~H~~~ 372 (507)
T COG4287 326 LRLALPKYIVNASGDDFFVPDSANLYYDDLPGEKALRMVPNDPHNLI 372 (507)
T ss_pred hhccccceeecccCCcccCCCccceeeccCCCceeeeeCCCCcchhh
Confidence 3568899999999999999999999999999854 778999999754
No 215
>PLN02408 phospholipase A1
Probab=93.13 E-value=0.13 Score=50.02 Aligned_cols=37 Identities=19% Similarity=0.326 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHHHhCCC--CEEEEEeCcchHHHHHHHHh
Q 013006 240 DLWQDQVCYFIKEVIRE--PVYVVGNSLGGFVAVYFAAC 276 (451)
Q Consensus 240 ~~~a~dv~~ll~~l~~~--~v~lvGhS~GG~val~~A~~ 276 (451)
+++.+.|..+++....+ ++++.|||+||.+|..+|..
T Consensus 182 ~qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~d 220 (365)
T PLN02408 182 EMVREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYD 220 (365)
T ss_pred HHHHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHH
Confidence 34556677777776544 58999999999999988765
No 216
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=93.04 E-value=1 Score=38.02 Aligned_cols=78 Identities=17% Similarity=0.260 Sum_probs=54.0
Q ss_pred CcEEEecCCCCChhcHHHHHHhhcCCceE-EEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccccC
Q 013006 160 PPVLFLPGFGVGSFHYEKQLKDLGKDYRA-WAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYS 238 (451)
Q Consensus 160 p~VlllHG~~~~~~~~~~~~~~L~~~~~V-i~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s 238 (451)
..||+.-|++..+.....++ |.+++++ +++|+...... ++
T Consensus 12 ~LIvyFaGwgtpps~v~HLi--lpeN~dl~lcYDY~dl~ld-------------------------------------fD 52 (214)
T COG2830 12 HLIVYFAGWGTPPSAVNHLI--LPENHDLLLCYDYQDLNLD-------------------------------------FD 52 (214)
T ss_pred EEEEEEecCCCCHHHHhhcc--CCCCCcEEEEeehhhcCcc-------------------------------------cc
Confidence 38899999999887765543 2455654 78898754322 22
Q ss_pred HHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCC
Q 013006 239 VDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATP 291 (451)
Q Consensus 239 ~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~ 291 (451)
+.. .+.+-+|++|||-.+|-++..-. ++++.+.++++.
T Consensus 53 fsA-------------y~hirlvAwSMGVwvAeR~lqg~--~lksatAiNGTg 90 (214)
T COG2830 53 FSA-------------YRHIRLVAWSMGVWVAERVLQGI--RLKSATAINGTG 90 (214)
T ss_pred hhh-------------hhhhhhhhhhHHHHHHHHHHhhc--cccceeeecCCC
Confidence 211 14567999999999999887766 478888888764
No 217
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=92.86 E-value=0.13 Score=43.69 Aligned_cols=48 Identities=29% Similarity=0.445 Sum_probs=39.1
Q ss_pred HHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccC
Q 013006 243 QDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNAT 290 (451)
Q Consensus 243 a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~ 290 (451)
.+--+.++++.-....++-|.||||..|..+.-+||+.+.++|.++..
T Consensus 88 ~AyerYv~eEalpgs~~~sgcsmGayhA~nfvfrhP~lftkvialSGv 135 (227)
T COG4947 88 RAYERYVIEEALPGSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGV 135 (227)
T ss_pred HHHHHHHHHhhcCCCccccccchhhhhhhhhheeChhHhhhheeecce
Confidence 334445566655566778899999999999999999999999999974
No 218
>PLN02934 triacylglycerol lipase
Probab=92.44 E-value=0.18 Score=50.72 Aligned_cols=38 Identities=26% Similarity=0.384 Sum_probs=31.5
Q ss_pred CHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHH
Q 013006 238 SVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAA 275 (451)
Q Consensus 238 s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~ 275 (451)
..+.+...+..+++.....++++.|||+||.+|..+|.
T Consensus 303 Ay~~v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 303 AYYAVRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHH
Confidence 44567777888888877789999999999999998875
No 219
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=92.27 E-value=0.22 Score=43.72 Aligned_cols=53 Identities=19% Similarity=0.169 Sum_probs=37.2
Q ss_pred CHHHHHHHHHHHHHH----hCCCCEEEEEeCcchHHHHHHHHh--C----CCccceEEEeccC
Q 013006 238 SVDLWQDQVCYFIKE----VIREPVYVVGNSLGGFVAVYFAAC--N----PHLVKGVTLLNAT 290 (451)
Q Consensus 238 s~~~~a~dv~~ll~~----l~~~~v~lvGhS~GG~val~~A~~--~----P~~v~~lvl~~~~ 290 (451)
+...=++++..+++. -.-.+++|+|+|.|+.++..++.. . .++|.++++++-+
T Consensus 59 S~~~G~~~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGdP 121 (179)
T PF01083_consen 59 SVAAGVANLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGDP 121 (179)
T ss_dssp HHHHHHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-T
T ss_pred cHHHHHHHHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEEecCC
Confidence 344444444444443 345689999999999999998877 2 3579999999864
No 220
>PLN02324 triacylglycerol lipase
Probab=92.18 E-value=0.19 Score=49.50 Aligned_cols=37 Identities=24% Similarity=0.289 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHHhCCC--CEEEEEeCcchHHHHHHHHh
Q 013006 240 DLWQDQVCYFIKEVIRE--PVYVVGNSLGGFVAVYFAAC 276 (451)
Q Consensus 240 ~~~a~dv~~ll~~l~~~--~v~lvGhS~GG~val~~A~~ 276 (451)
+++.+.|..+++....+ +|++.|||+||.+|+..|..
T Consensus 197 eqVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 197 EQVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 34555677777766543 59999999999999988864
No 221
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=91.92 E-value=1.6 Score=39.98 Aligned_cols=34 Identities=29% Similarity=0.362 Sum_probs=27.5
Q ss_pred CEEEEEeCcchHHHHHHHHhCCCccceEEEeccC
Q 013006 257 PVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNAT 290 (451)
Q Consensus 257 ~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~ 290 (451)
|++-||||||+-+-+.+...++..-++-++++-.
T Consensus 91 P~~~vGHSlGcklhlLi~s~~~~~r~gniliSFN 124 (250)
T PF07082_consen 91 PVYGVGHSLGCKLHLLIGSLFDVERAGNILISFN 124 (250)
T ss_pred CeeeeecccchHHHHHHhhhccCcccceEEEecC
Confidence 6788999999999888888776555777888754
No 222
>PLN02802 triacylglycerol lipase
Probab=91.62 E-value=0.23 Score=49.98 Aligned_cols=37 Identities=24% Similarity=0.299 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHHhCCC--CEEEEEeCcchHHHHHHHHh
Q 013006 240 DLWQDQVCYFIKEVIRE--PVYVVGNSLGGFVAVYFAAC 276 (451)
Q Consensus 240 ~~~a~dv~~ll~~l~~~--~v~lvGhS~GG~val~~A~~ 276 (451)
+++.+.|..+++....+ +|++.|||+||.+|+..|..
T Consensus 312 eqVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~d 350 (509)
T PLN02802 312 ESVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADE 350 (509)
T ss_pred HHHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHH
Confidence 34556677777766543 68999999999999987764
No 223
>PLN02310 triacylglycerol lipase
Probab=91.40 E-value=0.25 Score=48.62 Aligned_cols=37 Identities=24% Similarity=0.223 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHHhC----CCCEEEEEeCcchHHHHHHHHh
Q 013006 240 DLWQDQVCYFIKEVI----REPVYVVGNSLGGFVAVYFAAC 276 (451)
Q Consensus 240 ~~~a~dv~~ll~~l~----~~~v~lvGhS~GG~val~~A~~ 276 (451)
+++.+.|..+++.+. ..++++.|||+||.+|+..|..
T Consensus 189 ~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 189 EQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred HHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHH
Confidence 456667777777663 1369999999999999988753
No 224
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=91.21 E-value=0.32 Score=47.41 Aligned_cols=89 Identities=18% Similarity=0.154 Sum_probs=50.1
Q ss_pred CCcEEEecCCCC-ChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCcccccccc
Q 013006 159 SPPVLFLPGFGV-GSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAY 237 (451)
Q Consensus 159 ~p~VlllHG~~~-~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 237 (451)
.-.||+.||+-+ +...|...+....+.+.=..+..+|+-..-.... .... +
T Consensus 80 ~HLvVlthGi~~~~~~~~~~~~~~~~kk~p~~~iv~~g~~~~~~~T~------------~Gv~----------------~ 131 (405)
T KOG4372|consen 80 KHLVVLTHGLHGADMEYWKEKIEQMTKKMPDKLIVVRGKMNNMCQTF------------DGVD----------------V 131 (405)
T ss_pred ceEEEeccccccccHHHHHHHHHhhhcCCCcceEeeeccccchhhcc------------ccce----------------e
Confidence 457999999976 6677777776665432221333344322211110 0000 1
Q ss_pred CHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHH
Q 013006 238 SVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAA 275 (451)
Q Consensus 238 s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~ 275 (451)
-=..+++++.+.+....++++..||||+||.++-.+..
T Consensus 132 lG~Rla~~~~e~~~~~si~kISfvghSLGGLvar~AIg 169 (405)
T KOG4372|consen 132 LGERLAEEVKETLYDYSIEKISFVGHSLGGLVARYAIG 169 (405)
T ss_pred eecccHHHHhhhhhccccceeeeeeeecCCeeeeEEEE
Confidence 11233445555555556789999999999998765443
No 225
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=91.05 E-value=0.4 Score=46.44 Aligned_cols=37 Identities=38% Similarity=0.464 Sum_probs=29.5
Q ss_pred CCCCEEEEEeCcchHHHHHHHHhCCC-----ccceEEEeccC
Q 013006 254 IREPVYVVGNSLGGFVAVYFAACNPH-----LVKGVTLLNAT 290 (451)
Q Consensus 254 ~~~~v~lvGhS~GG~val~~A~~~P~-----~v~~lvl~~~~ 290 (451)
+.+|+.|||||+|+.+.........+ .|+.+++++++
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gap 259 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAP 259 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCC
Confidence 56789999999999998876654433 48999999874
No 226
>PLN02753 triacylglycerol lipase
Probab=91.04 E-value=0.28 Score=49.58 Aligned_cols=36 Identities=28% Similarity=0.308 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHHhCC-----CCEEEEEeCcchHHHHHHHH
Q 013006 240 DLWQDQVCYFIKEVIR-----EPVYVVGNSLGGFVAVYFAA 275 (451)
Q Consensus 240 ~~~a~dv~~ll~~l~~-----~~v~lvGhS~GG~val~~A~ 275 (451)
+++.+.|..+++.... -+|++.|||+||.+|+..|.
T Consensus 291 eQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~ 331 (531)
T PLN02753 291 EQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAY 331 (531)
T ss_pred HHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHH
Confidence 4455666677766543 47999999999999998875
No 227
>PLN02719 triacylglycerol lipase
Probab=90.16 E-value=0.37 Score=48.61 Aligned_cols=37 Identities=27% Similarity=0.246 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHHhCC-----CCEEEEEeCcchHHHHHHHHh
Q 013006 240 DLWQDQVCYFIKEVIR-----EPVYVVGNSLGGFVAVYFAAC 276 (451)
Q Consensus 240 ~~~a~dv~~ll~~l~~-----~~v~lvGhS~GG~val~~A~~ 276 (451)
+++.+.|..+++.... .++++.|||+||.+|+..|..
T Consensus 277 eQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 277 EQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred HHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHH
Confidence 3455666666666542 369999999999999988753
No 228
>PLN03037 lipase class 3 family protein; Provisional
Probab=90.08 E-value=0.38 Score=48.64 Aligned_cols=37 Identities=22% Similarity=0.244 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHHhCC----CCEEEEEeCcchHHHHHHHHh
Q 013006 240 DLWQDQVCYFIKEVIR----EPVYVVGNSLGGFVAVYFAAC 276 (451)
Q Consensus 240 ~~~a~dv~~ll~~l~~----~~v~lvGhS~GG~val~~A~~ 276 (451)
+++.++|..+++.+.. .++++.|||+||.+|+..|..
T Consensus 298 eQVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 298 EQVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHH
Confidence 4456777777776642 369999999999999988753
No 229
>PLN02761 lipase class 3 family protein
Probab=90.06 E-value=0.4 Score=48.54 Aligned_cols=36 Identities=22% Similarity=0.172 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHhC------CCCEEEEEeCcchHHHHHHHH
Q 013006 240 DLWQDQVCYFIKEVI------REPVYVVGNSLGGFVAVYFAA 275 (451)
Q Consensus 240 ~~~a~dv~~ll~~l~------~~~v~lvGhS~GG~val~~A~ 275 (451)
+++.+.|..+++... .-++++.|||+||.+|+..|.
T Consensus 272 ~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 272 EQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAY 313 (527)
T ss_pred HHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHH
Confidence 445566777777662 136999999999999998875
No 230
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=88.45 E-value=3 Score=43.60 Aligned_cols=56 Identities=11% Similarity=0.006 Sum_probs=37.4
Q ss_pred cCHHHHHHHHH---HHHHHhCC--CCEEEEEeCcchHHHHHHHHh--CCCccceEEEeccCCC
Q 013006 237 YSVDLWQDQVC---YFIKEVIR--EPVYVVGNSLGGFVAVYFAAC--NPHLVKGVTLLNATPF 292 (451)
Q Consensus 237 ~s~~~~a~dv~---~ll~~l~~--~~v~lvGhS~GG~val~~A~~--~P~~v~~lvl~~~~~~ 292 (451)
+.+.|+...+. .-|...+. ++|.|+|||.||..+..+... ...++.++|.+++...
T Consensus 171 ~gl~Dq~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~~~ 233 (545)
T KOG1516|consen 171 LGLFDQLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGNAL 233 (545)
T ss_pred ccHHHHHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhccccc
Confidence 34445554444 44444554 679999999999998776653 2257888888887654
No 231
>PLN02847 triacylglycerol lipase
Probab=87.95 E-value=0.76 Score=47.23 Aligned_cols=27 Identities=30% Similarity=0.368 Sum_probs=21.0
Q ss_pred HHHhCCCCEEEEEeCcchHHHHHHHHh
Q 013006 250 IKEVIREPVYVVGNSLGGFVAVYFAAC 276 (451)
Q Consensus 250 l~~l~~~~v~lvGhS~GG~val~~A~~ 276 (451)
++....-+++++|||+||.+|..++..
T Consensus 245 l~~~PdYkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 245 LDEYPDFKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred HHHCCCCeEEEeccChHHHHHHHHHHH
Confidence 333344589999999999999888765
No 232
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=87.09 E-value=0.77 Score=44.67 Aligned_cols=37 Identities=24% Similarity=0.259 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHh
Q 013006 240 DLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAAC 276 (451)
Q Consensus 240 ~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~ 276 (451)
..+.+++..+++....-++.+-|||+||.+|..+|..
T Consensus 155 ~~~~~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 155 SGLDAELRRLIELYPNYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHHhcCCcEEEEecCChHHHHHHHHHHH
Confidence 5777888888888887789999999999999988764
No 233
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=75.78 E-value=12 Score=35.62 Aligned_cols=104 Identities=24% Similarity=0.219 Sum_probs=66.9
Q ss_pred CCCcEEEecCCCCChhc----HHHHHHh---hc-------CCceEEEEcCC-CCCCCCCCCCCCCCCCCCCchhhhhccc
Q 013006 158 NSPPVLFLPGFGVGSFH----YEKQLKD---LG-------KDYRAWAIDFL-GQGMSLPDEDPTPRSKEGDSTEEKNFLW 222 (451)
Q Consensus 158 ~~p~VlllHG~~~~~~~----~~~~~~~---L~-------~~~~Vi~~D~r-G~G~S~~~~~~~~~~~~~~~~~~~~~~w 222 (451)
.+|..+.+.|.++.+.. |+++-+. +. +...++.+|-| |.|.|--.....
T Consensus 30 ~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWlk~adllfvDnPVGaGfSyVdg~~~---------------- 93 (414)
T KOG1283|consen 30 ERPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWLKDADLLFVDNPVGAGFSYVDGSSA---------------- 93 (414)
T ss_pred CCCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhhhhccEEEecCCCcCceeeecCccc----------------
Confidence 46778888887655543 3322211 11 13568888877 788774322210
Q ss_pred cCCCCCCccccccccCHHHHHHHHHHHHHHh-------CCCCEEEEEeCcchHHHHHHHHhCC---------CccceEEE
Q 013006 223 GFGDKAQPWASELAYSVDLWQDQVCYFIKEV-------IREPVYVVGNSLGGFVAVYFAACNP---------HLVKGVTL 286 (451)
Q Consensus 223 ~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l-------~~~~v~lvGhS~GG~val~~A~~~P---------~~v~~lvl 286 (451)
..-+.++.+.|+.++++.+ .-.|++|+--|+||-+|..++...- -.+.+++|
T Consensus 94 ------------Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaL 161 (414)
T KOG1283|consen 94 ------------YTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVAL 161 (414)
T ss_pred ------------ccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEc
Confidence 1136788889999998875 3468999999999999988876432 24667777
Q ss_pred ecc
Q 013006 287 LNA 289 (451)
Q Consensus 287 ~~~ 289 (451)
=++
T Consensus 162 GDS 164 (414)
T KOG1283|consen 162 GDS 164 (414)
T ss_pred cCc
Confidence 665
No 234
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=75.54 E-value=26 Score=36.15 Aligned_cols=43 Identities=23% Similarity=0.365 Sum_probs=28.4
Q ss_pred CCEEEEEeCcchHHHHHHH----HhCCCccceEEEeccCCCCCCCCC
Q 013006 256 EPVYVVGNSLGGFVAVYFA----ACNPHLVKGVTLLNATPFWGFSPN 298 (451)
Q Consensus 256 ~~v~lvGhS~GG~val~~A----~~~P~~v~~lvl~~~~~~~~~~~~ 298 (451)
++|+++|-|.||.+.+-.| +..=..-+++++.-++....+.+.
T Consensus 469 Eriv~aGDSAGgNL~~~VaLr~i~~gvRvPDGl~laY~ptl~q~~pS 515 (880)
T KOG4388|consen 469 ERIVLAGDSAGGNLCFTVALRAIAYGVRVPDGLMLAYPPTLLQPAPS 515 (880)
T ss_pred ceEEEeccCCCcceeehhHHHHHHhCCCCCCceEEecChhhcccCCC
Confidence 8999999999997654444 332223468888877654444443
No 235
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=73.64 E-value=7 Score=36.38 Aligned_cols=44 Identities=18% Similarity=0.219 Sum_probs=30.0
Q ss_pred HHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEecc
Q 013006 244 DQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNA 289 (451)
Q Consensus 244 ~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~ 289 (451)
+-+..+.+...-.++.+-|||+||.+|..+-.++. +-.+..-+|
T Consensus 264 dI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg--lP~VaFesP 307 (425)
T COG5153 264 DILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFG--LPVVAFESP 307 (425)
T ss_pred HHHHHHHHhCCCceEEEeccccchHHHHHhccccC--CceEEecCc
Confidence 33444444455578999999999999998887763 334444444
No 236
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=73.64 E-value=7 Score=36.38 Aligned_cols=44 Identities=18% Similarity=0.219 Sum_probs=30.0
Q ss_pred HHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEecc
Q 013006 244 DQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNA 289 (451)
Q Consensus 244 ~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~ 289 (451)
+-+..+.+...-.++.+-|||+||.+|..+-.++. +-.+..-+|
T Consensus 264 dI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg--lP~VaFesP 307 (425)
T KOG4540|consen 264 DILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFG--LPVVAFESP 307 (425)
T ss_pred HHHHHHHHhCCCceEEEeccccchHHHHHhccccC--CceEEecCc
Confidence 33444444455578999999999999998887763 334444444
No 237
>PRK12467 peptide synthase; Provisional
Probab=64.23 E-value=44 Score=44.01 Aligned_cols=97 Identities=19% Similarity=0.053 Sum_probs=70.0
Q ss_pred CcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccccCH
Q 013006 160 PPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSV 239 (451)
Q Consensus 160 p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~ 239 (451)
+.|++.|........+..+...|..+..|+.+..++.-..... ..++
T Consensus 3693 ~~l~~~h~~~r~~~~~~~l~~~l~~~~~~~~l~~~~~~~d~~~---------------------------------~~~~ 3739 (3956)
T PRK12467 3693 PALFCRHEGLGTVFDYEPLAVILEGDRHVLGLTCRHLLDDGWQ---------------------------------DTSL 3739 (3956)
T ss_pred cceeeechhhcchhhhHHHHHHhCCCCcEEEEeccccccccCC---------------------------------ccch
Confidence 4599999998888888888888877788888887765332211 1366
Q ss_pred HHHHHHHHHHHHHhC-CCCEEEEEeCcchHHHHHHHHh---CCCccceEEEecc
Q 013006 240 DLWQDQVCYFIKEVI-REPVYVVGNSLGGFVAVYFAAC---NPHLVKGVTLLNA 289 (451)
Q Consensus 240 ~~~a~dv~~ll~~l~-~~~v~lvGhS~GG~val~~A~~---~P~~v~~lvl~~~ 289 (451)
+.++......+.... ..+..+.|+|+||.++..++.. ..+.+.-+.+++.
T Consensus 3740 ~~~~~~y~~~~~~~~~~~p~~l~g~s~g~~~a~~~~~~l~~~g~~~~~~~~~~~ 3793 (3956)
T PRK12467 3740 QAMAVQYADYILWQQAKGPYGLLGWSLGGTLARLVAELLEREGESEAFLGLFDN 3793 (3956)
T ss_pred HHHHHHHHHHHHHhccCCCeeeeeeecchHHHHHHHHHHHHcCCceeEEEEEec
Confidence 777777766666553 3678999999999999888764 3456666666654
No 238
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=63.98 E-value=1e+02 Score=30.09 Aligned_cols=101 Identities=18% Similarity=0.146 Sum_probs=62.2
Q ss_pred CcEEEecCCCCChhcHHH-HHHhh-cCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCcccccccc
Q 013006 160 PPVLFLPGFGVGSFHYEK-QLKDL-GKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAY 237 (451)
Q Consensus 160 p~VlllHG~~~~~~~~~~-~~~~L-~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 237 (451)
.+||++=|+.+..+.|.. .+... .+|+.++.+-.|-+-..-....+ ..
T Consensus 39 k~Iv~~~gWag~~~r~l~ky~~~Yq~~g~~~~~~tap~~~~~~~~s~~------------------------------~~ 88 (350)
T KOG2521|consen 39 KPIVVLLGWAGAIDRNLMKYSKIYQDKGYIVVRITAPCPSVFLSASRR------------------------------IL 88 (350)
T ss_pred ccEEEEeeeccccchhHHHHHHHHhcCCceEEEecCcccccccccccc------------------------------cc
Confidence 477777777776666543 33333 55799998888866443221111 14
Q ss_pred CHHHHHHHHHHHHHHhC--CCCEEEEEeCcchHHHHHHH---H-hC-C---CccceEEEeccC
Q 013006 238 SVDLWQDQVCYFIKEVI--REPVYVVGNSLGGFVAVYFA---A-CN-P---HLVKGVTLLNAT 290 (451)
Q Consensus 238 s~~~~a~dv~~ll~~l~--~~~v~lvGhS~GG~val~~A---~-~~-P---~~v~~lvl~~~~ 290 (451)
++.....-+..++.... ..++++--+|+||.+.+... . ++ | +.+.+++..+.+
T Consensus 89 sl~~~~~~l~~L~~~~~~~~~pi~fh~FS~ng~~~~~si~~~~~~~~~~~~~~~~~~~fdS~p 151 (350)
T KOG2521|consen 89 SLSLASTRLSELLSDYNSDPCPIIFHVFSGNGVRLMYSISLQLIKHEPKAAQLSGGIIFDSAP 151 (350)
T ss_pred hhhHHHHHHHHHhhhccCCcCceEEEEecCCceeehHHHHHHHhhcCchhHhhcCCceEeccc
Confidence 55666667777777766 45788889999997765443 1 22 2 345667776654
No 239
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=63.46 E-value=12 Score=38.60 Aligned_cols=53 Identities=19% Similarity=0.397 Sum_probs=31.6
Q ss_pred CHHHHHHHHHHHHHHhC---CCCEEEEEeCcchHHHHHHHH-----hCCC------ccceEEEeccC
Q 013006 238 SVDLWQDQVCYFIKEVI---REPVYVVGNSLGGFVAVYFAA-----CNPH------LVKGVTLLNAT 290 (451)
Q Consensus 238 s~~~~a~dv~~ll~~l~---~~~v~lvGhS~GG~val~~A~-----~~P~------~v~~lvl~~~~ 290 (451)
++..-...+...+.+.+ ..+++.|||||||.++=.+.. ..|+ ..+++|+++.+
T Consensus 505 sl~~Rs~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~P 571 (697)
T KOG2029|consen 505 SLAARSNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVP 571 (697)
T ss_pred HHHHHHHHHHHHHHHhccCCCCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecC
Confidence 33333334433444433 368999999999988754433 2343 36778877753
No 240
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=63.42 E-value=28 Score=31.74 Aligned_cols=40 Identities=28% Similarity=0.157 Sum_probs=28.0
Q ss_pred CHHHHHHHHHHHHHHh--CCCCEEEEEeCcchHHHHHHHHhC
Q 013006 238 SVDLWQDQVCYFIKEV--IREPVYVVGNSLGGFVAVYFAACN 277 (451)
Q Consensus 238 s~~~~a~dv~~ll~~l--~~~~v~lvGhS~GG~val~~A~~~ 277 (451)
++.+=++.+.+.++.. ..++++++|+|+|+.++...+.+.
T Consensus 28 Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~l 69 (225)
T PF08237_consen 28 SVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRRL 69 (225)
T ss_pred HHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHHH
Confidence 5555555555555542 347899999999999998776653
No 241
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=61.97 E-value=18 Score=36.60 Aligned_cols=39 Identities=28% Similarity=0.271 Sum_probs=30.7
Q ss_pred hCCCCEEEEEeCcchHHHHHHHHh-----CCCccceEEEeccCC
Q 013006 253 VIREPVYVVGNSLGGFVAVYFAAC-----NPHLVKGVTLLNATP 291 (451)
Q Consensus 253 l~~~~v~lvGhS~GG~val~~A~~-----~P~~v~~lvl~~~~~ 291 (451)
+|.+||.|||+|+|+-+.+..... .-..|..++|++++.
T Consensus 444 qG~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv 487 (633)
T KOG2385|consen 444 QGNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPV 487 (633)
T ss_pred cCCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCc
Confidence 477899999999999998865542 234789999999753
No 242
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=58.74 E-value=16 Score=32.27 Aligned_cols=48 Identities=10% Similarity=-0.037 Sum_probs=35.0
Q ss_pred cCC-CCCEEEEeeCCCCCCChHHHHHHHHHCCC-----CcEEEeCCCCCCcccc
Q 013006 394 QMN-GVPICLIYGKEDPWVKPVWGLQVKRQVPE-----APYYEISPAGHCPHDE 441 (451)
Q Consensus 394 ~~i-~~PvLii~G~~D~~v~~~~~~~l~~~lp~-----~~~~~i~~~gH~~~~e 441 (451)
+.| +++.|-|-|+.|.+..+.........+.+ ...++.+++||+-.+.
T Consensus 130 ~aI~~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~ 183 (202)
T PF06850_consen 130 AAIRRTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFN 183 (202)
T ss_pred HHcccceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeeccc
Confidence 344 45677799999999998777666555443 3467888999997654
No 243
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=54.56 E-value=50 Score=25.79 Aligned_cols=44 Identities=11% Similarity=0.169 Sum_probs=35.4
Q ss_pred HHHHHHHHHHhCCCCEEEEEeCcch--HHHHHHHHhCCCccceEEE
Q 013006 243 QDQVCYFIKEVIREPVYVVGNSLGG--FVAVYFAACNPHLVKGVTL 286 (451)
Q Consensus 243 a~dv~~ll~~l~~~~v~lvGhS~GG--~val~~A~~~P~~v~~lvl 286 (451)
.+.+..+++.....++++||=|--. -+-..+|.++|++|.++.+
T Consensus 52 ~~~i~~i~~~fP~~kfiLIGDsgq~DpeiY~~ia~~~P~~i~ai~I 97 (100)
T PF09949_consen 52 RDNIERILRDFPERKFILIGDSGQHDPEIYAEIARRFPGRILAIYI 97 (100)
T ss_pred HHHHHHHHHHCCCCcEEEEeeCCCcCHHHHHHHHHHCCCCEEEEEE
Confidence 4567788888888999999988665 3445678899999999865
No 244
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=53.56 E-value=42 Score=29.97 Aligned_cols=50 Identities=14% Similarity=0.040 Sum_probs=39.8
Q ss_pred cCHHHHHHHHHHHHHHhCCCCEEEEEeCc----chHHHHHHHHhCC-CccceEEEe
Q 013006 237 YSVDLWQDQVCYFIKEVIREPVYVVGNSL----GGFVAVYFAACNP-HLVKGVTLL 287 (451)
Q Consensus 237 ~s~~~~a~dv~~ll~~l~~~~v~lvGhS~----GG~val~~A~~~P-~~v~~lvl~ 287 (451)
|+.+.+++.+.+++++.+ ..++|+|+|. |..++-.+|++.. ..+..++-+
T Consensus 91 ~~~e~~a~al~~~i~~~~-p~lVL~~~t~~~~~grdlaprlAarLga~lvsdv~~l 145 (202)
T cd01714 91 ADTLATAKALAAAIKKIG-VDLILTGKQSIDGDTGQVGPLLAELLGWPQITYVSKI 145 (202)
T ss_pred CChHHHHHHHHHHHHHhC-CCEEEEcCCcccCCcCcHHHHHHHHhCCCccceEEEE
Confidence 688999999999998877 6799999999 8899999888752 245555554
No 245
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=53.28 E-value=14 Score=35.06 Aligned_cols=30 Identities=33% Similarity=0.408 Sum_probs=24.6
Q ss_pred HHHHHHhCCCCEEEEEeCcchHHHHHHHHh
Q 013006 247 CYFIKEVIREPVYVVGNSLGGFVAVYFAAC 276 (451)
Q Consensus 247 ~~ll~~l~~~~v~lvGhS~GG~val~~A~~ 276 (451)
..+++..++++-.++|||+|-..|+.++..
T Consensus 73 ~~~l~~~Gi~p~~~~GhSlGE~aA~~~ag~ 102 (298)
T smart00827 73 ARLWRSWGVRPDAVVGHSLGEIAAAYVAGV 102 (298)
T ss_pred HHHHHHcCCcccEEEecCHHHHHHHHHhCC
Confidence 345677889999999999999999877653
No 246
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=52.64 E-value=8.5 Score=37.07 Aligned_cols=31 Identities=26% Similarity=0.411 Sum_probs=25.0
Q ss_pred HHHHHHHhCCCCEEEEEeCcchHHHHHHHHh
Q 013006 246 VCYFIKEVIREPVYVVGNSLGGFVAVYFAAC 276 (451)
Q Consensus 246 v~~ll~~l~~~~v~lvGhS~GG~val~~A~~ 276 (451)
+..+++..|+++-.++|||+|=+.|+.+|..
T Consensus 74 l~~~l~~~Gi~P~~v~GhSlGE~aA~~aaG~ 104 (318)
T PF00698_consen 74 LARLLRSWGIKPDAVIGHSLGEYAALVAAGA 104 (318)
T ss_dssp HHHHHHHTTHCESEEEESTTHHHHHHHHTTS
T ss_pred hhhhhcccccccceeeccchhhHHHHHHCCc
Confidence 4456677889999999999999988877643
No 247
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=50.19 E-value=16 Score=34.60 Aligned_cols=31 Identities=23% Similarity=0.349 Sum_probs=24.8
Q ss_pred HHHHHHHhCCCCEEEEEeCcchHHHHHHHHh
Q 013006 246 VCYFIKEVIREPVYVVGNSLGGFVAVYFAAC 276 (451)
Q Consensus 246 v~~ll~~l~~~~v~lvGhS~GG~val~~A~~ 276 (451)
+..+++..++++..++|||+|=..|+.++..
T Consensus 66 l~~~l~~~g~~P~~v~GhS~GE~aAa~~aG~ 96 (295)
T TIGR03131 66 AWRALLALLPRPSAVAGYSVGEYAAAVVAGV 96 (295)
T ss_pred HHHHHHhcCCCCcEEeecCHHHHHHHHHhCC
Confidence 3445667788999999999999998887653
No 248
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=49.08 E-value=18 Score=37.00 Aligned_cols=51 Identities=22% Similarity=0.352 Sum_probs=36.9
Q ss_pred hhhccCCCCCEEEEeeCCCCCCChHHHHHHHH----HCCC--------CcEEEeCCCCCCccc
Q 013006 390 LSRCQMNGVPICLIYGKEDPWVKPVWGLQVKR----QVPE--------APYYEISPAGHCPHD 440 (451)
Q Consensus 390 ~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~----~lp~--------~~~~~i~~~gH~~~~ 440 (451)
+...++-.-.+++.||..|+++++.....+.+ ...+ .++..+||.+||.--
T Consensus 346 LsaF~~~GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG 408 (474)
T PF07519_consen 346 LSAFRARGGKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGG 408 (474)
T ss_pred HHHHHhcCCeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCC
Confidence 34445557899999999999999876654433 3321 368899999999643
No 249
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=47.84 E-value=84 Score=30.87 Aligned_cols=87 Identities=13% Similarity=0.099 Sum_probs=59.7
Q ss_pred CCcEEEecCCCCCh-------hcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCcc
Q 013006 159 SPPVLFLPGFGVGS-------FHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPW 231 (451)
Q Consensus 159 ~p~VlllHG~~~~~-------~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~ 231 (451)
...||++||-+.+. +.|..+++.+.+.-.+-.+|.--+|.-+
T Consensus 171 ~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~------------------------------- 219 (396)
T COG1448 171 EGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFAD------------------------------- 219 (396)
T ss_pred CCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhcc-------------------------------
Confidence 34699999876554 5699999988776667777877666543
Q ss_pred ccccccCHHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccC
Q 013006 232 ASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNAT 290 (451)
Q Consensus 232 ~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~ 290 (451)
.+++-+..++.+++. .+-.+|..|+-=..++ |.+||-++++++..
T Consensus 220 ------GleeDa~~lR~~a~~---~~~~lva~S~SKnfgL-----YgERVGa~~vva~~ 264 (396)
T COG1448 220 ------GLEEDAYALRLFAEV---GPELLVASSFSKNFGL-----YGERVGALSVVAED 264 (396)
T ss_pred ------chHHHHHHHHHHHHh---CCcEEEEehhhhhhhh-----hhhccceeEEEeCC
Confidence 233334445545444 3338888887766544 67999999999864
No 250
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=46.04 E-value=20 Score=33.82 Aligned_cols=30 Identities=30% Similarity=0.383 Sum_probs=23.9
Q ss_pred HHHHHhC-CCCEEEEEeCcchHHHHHHHHhC
Q 013006 248 YFIKEVI-REPVYVVGNSLGGFVAVYFAACN 277 (451)
Q Consensus 248 ~ll~~l~-~~~v~lvGhS~GG~val~~A~~~ 277 (451)
.++++.+ +.+..++|||+|=+.|+.++...
T Consensus 74 ~~l~~~g~i~p~~v~GhS~GE~aAa~~aG~l 104 (290)
T TIGR00128 74 LKLKEQGGLKPDFAAGHSLGEYSALVAAGAL 104 (290)
T ss_pred HHHHHcCCCCCCEEeecCHHHHHHHHHhCCC
Confidence 4455666 89999999999999988877543
No 251
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=42.41 E-value=4e+02 Score=27.35 Aligned_cols=107 Identities=17% Similarity=0.176 Sum_probs=66.5
Q ss_pred EEeecCCCCCCCCcEEEecCCCCChhcHHH--HHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCC
Q 013006 148 HYEKAGCENVNSPPVLFLPGFGVGSFHYEK--QLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFG 225 (451)
Q Consensus 148 ~y~~~g~~~~~~p~VlllHG~~~~~~~~~~--~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~ 225 (451)
+|...| +-+.|..|..-|+-. ++-++. .++.|.. --.+.-|.|=.|.+=.....
T Consensus 280 yYFnPG--D~KPPL~VYFSGyR~-aEGFEgy~MMk~Lg~-PfLL~~DpRleGGaFYlGs~-------------------- 335 (511)
T TIGR03712 280 YYFNPG--DFKPPLNVYFSGYRP-AEGFEGYFMMKRLGA-PFLLIGDPRLEGGAFYLGSD-------------------- 335 (511)
T ss_pred EecCCc--CCCCCeEEeeccCcc-cCcchhHHHHHhcCC-CeEEeeccccccceeeeCcH--------------------
Confidence 334444 345678899999854 444443 3455532 23556687777766211110
Q ss_pred CCCCccccccccCHHHHHHHHHHHHHHhCC--CCEEEEEeCcchHHHHHHHHhCCCccceEEEeccCC
Q 013006 226 DKAQPWASELAYSVDLWQDQVCYFIKEVIR--EPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATP 291 (451)
Q Consensus 226 ~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~--~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~~ 291 (451)
.| -..+.+-|..-|+.|+. +.++|-|-|||..-|+.++++.- -.++|+--|..
T Consensus 336 ----------ey-E~~I~~~I~~~L~~LgF~~~qLILSGlSMGTfgAlYYga~l~--P~AIiVgKPL~ 390 (511)
T TIGR03712 336 ----------EY-EQGIINVIQEKLDYLGFDHDQLILSGLSMGTFGALYYGAKLS--PHAIIVGKPLV 390 (511)
T ss_pred ----------HH-HHHHHHHHHHHHHHhCCCHHHeeeccccccchhhhhhcccCC--CceEEEcCccc
Confidence 01 33455666677788886 46999999999999999999852 34666666543
No 252
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=41.16 E-value=35 Score=29.38 Aligned_cols=33 Identities=24% Similarity=0.210 Sum_probs=25.7
Q ss_pred HHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCC
Q 013006 246 VCYFIKEVIREPVYVVGNSLGGFVAVYFAACNP 278 (451)
Q Consensus 246 v~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P 278 (451)
+.+.+++.++..-.+.|-|.|+.++..++...+
T Consensus 16 vl~aL~e~gi~~d~v~GtSaGAi~aa~~a~g~~ 48 (172)
T cd07198 16 VAKALRERGPLIDIIAGTSAGAIVAALLASGRD 48 (172)
T ss_pred HHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCC
Confidence 334445557788889999999999999988654
No 253
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=40.09 E-value=35 Score=32.74 Aligned_cols=33 Identities=24% Similarity=0.275 Sum_probs=26.6
Q ss_pred HHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhC
Q 013006 245 QVCYFIKEVIREPVYVVGNSLGGFVAVYFAACN 277 (451)
Q Consensus 245 dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~ 277 (451)
-+.+.+++.++..-.++|-|+|+.++..+|+.+
T Consensus 32 GvL~aLee~gi~~d~v~GtSaGAi~ga~ya~g~ 64 (306)
T cd07225 32 GVIKALEEAGIPVDMVGGTSIGAFIGALYAEER 64 (306)
T ss_pred HHHHHHHHcCCCCCEEEEECHHHHHHHHHHcCC
Confidence 344556666888888999999999999999874
No 254
>PRK10279 hypothetical protein; Provisional
Probab=39.54 E-value=33 Score=32.81 Aligned_cols=33 Identities=30% Similarity=0.270 Sum_probs=26.8
Q ss_pred HHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCC
Q 013006 246 VCYFIKEVIREPVYVVGNSLGGFVAVYFAACNP 278 (451)
Q Consensus 246 v~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P 278 (451)
+.+.+++.++..-.++|-|+|+.++..+|....
T Consensus 23 VL~aL~E~gi~~d~i~GtS~GAlvga~yA~g~~ 55 (300)
T PRK10279 23 VINALKKVGIEIDIVAGCSIGSLVGAAYACDRL 55 (300)
T ss_pred HHHHHHHcCCCcCEEEEEcHHHHHHHHHHcCCh
Confidence 444556678888899999999999999997654
No 255
>COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [Signal transduction mechanisms]
Probab=39.33 E-value=55 Score=34.02 Aligned_cols=49 Identities=18% Similarity=0.342 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHHHhCCCCEEEEEe------CcchHHHHHHHHhCCCccceEEEeccC
Q 013006 239 VDLWQDQVCYFIKEVIREPVYVVGN------SLGGFVAVYFAACNPHLVKGVTLLNAT 290 (451)
Q Consensus 239 ~~~~a~dv~~ll~~l~~~~v~lvGh------S~GG~val~~A~~~P~~v~~lvl~~~~ 290 (451)
...+...+.+++.. .++|+++|| ++|+.+++..-+..-.+ .+.++++|.
T Consensus 323 aRvis~al~d~i~e--~d~VfImGHk~pDmDalGsAig~~~~A~~~~~-~a~~v~dp~ 377 (655)
T COG3887 323 ARVISTALSDIIKE--SDNVFIMGHKFPDMDALGSAIGMQKFASMNNK-EAFAVLDPE 377 (655)
T ss_pred HHHHHHHHHHHHhh--cCcEEEEccCCCChHHHHHHHHHHHHHHhccc-ccEEEECcc
Confidence 34444555555544 689999999 78999998776665444 778888864
No 256
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=35.54 E-value=32 Score=29.38 Aligned_cols=32 Identities=22% Similarity=0.253 Sum_probs=23.6
Q ss_pred cCHHHHHHHH----HHHHHHhC----CCCEEEEEeCcchH
Q 013006 237 YSVDLWQDQV----CYFIKEVI----REPVYVVGNSLGGF 268 (451)
Q Consensus 237 ~s~~~~a~dv----~~ll~~l~----~~~v~lvGhS~GG~ 268 (451)
++.+.++.-+ ..|.+... ++++.|+|+|++..
T Consensus 77 ~~a~~La~~l~~~~~~l~~~~~~~~~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 77 YSADELANKLIKFKQQLKQKYGINISPKKISLVGCSLADN 116 (157)
T ss_dssp EEHHHHHHHHHHHHHHHHHHHTTT--ESEEEEESSS-S-T
T ss_pred CCHHHHHHHHHHHHHHHHHhccCCCCCCEEEEEEecccCC
Confidence 7899999998 55555553 46899999999987
No 257
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=34.99 E-value=48 Score=29.04 Aligned_cols=29 Identities=24% Similarity=0.158 Sum_probs=23.3
Q ss_pred HHHHhCCCCEEEEEeCcchHHHHHHHHhC
Q 013006 249 FIKEVIREPVYVVGNSLGGFVAVYFAACN 277 (451)
Q Consensus 249 ll~~l~~~~v~lvGhS~GG~val~~A~~~ 277 (451)
.+++.++..=.++|-|.|+.++..++...
T Consensus 20 ~L~e~~~~~d~i~GtSaGai~aa~~a~g~ 48 (194)
T cd07207 20 ALEEAGILKKRVAGTSAGAITAALLALGY 48 (194)
T ss_pred HHHHcCCCcceEEEECHHHHHHHHHHcCC
Confidence 34455777788999999999999998754
No 258
>PRK02399 hypothetical protein; Provisional
Probab=33.75 E-value=2.4e+02 Score=28.08 Aligned_cols=120 Identities=13% Similarity=0.073 Sum_probs=63.7
Q ss_pred CcEEEecCCCCChhcHHHHHHhh-cCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccccC
Q 013006 160 PPVLFLPGFGVGSFHYEKQLKDL-GKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYS 238 (451)
Q Consensus 160 p~VlllHG~~~~~~~~~~~~~~L-~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s 238 (451)
+.|+++--+-.-...+..+-..+ ..+..|+.+|.-..|......+-....-......+....+.-.+ ....
T Consensus 4 ~~I~iigT~DTK~~E~~yl~~~i~~~g~~v~~iDv~~~~~p~~~~dis~~~Va~~~g~~~~~~~~~~d--------Rg~a 75 (406)
T PRK02399 4 KRIYIAGTLDTKGEELAYVKDLIEAAGLEVVTVDVSGLGEPPFEPDISAEEVAEAAGDGIEAVFCGGD--------RGSA 75 (406)
T ss_pred CEEEEEeccCCcHHHHHHHHHHHHHCCCceEEEecCCCCCCCCCCCCCHHHHHHHcCCCHHHhhcCcc--------HHHH
Confidence 44555544444445555555555 44799999998444422111100000000000000011111111 1234
Q ss_pred HHHHHHHHHHHHHHh----CCCCEEEEEeCcchHHHHHHHHhCCCccceEEEe
Q 013006 239 VDLWQDQVCYFIKEV----IREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLL 287 (451)
Q Consensus 239 ~~~~a~dv~~ll~~l----~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~ 287 (451)
++.+++.+..+++.| .+.=++-+|-|.|..++.......|=-+-++++-
T Consensus 76 i~~M~~ga~~~v~~L~~~g~i~gviglGGs~GT~lat~aMr~LPiG~PKlmVS 128 (406)
T PRK02399 76 MAAMAEGAAAFVRELYERGDVAGVIGLGGSGGTALATPAMRALPIGVPKLMVS 128 (406)
T ss_pred HHHHHHHHHHHHHHHHhcCCccEEEEecCcchHHHHHHHHHhCCCCCCeEEEE
Confidence 566777777777654 2455788999999999999988888666666543
No 259
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=33.74 E-value=56 Score=29.62 Aligned_cols=30 Identities=30% Similarity=0.316 Sum_probs=23.7
Q ss_pred HHHHHhCCCCEEEEEeCcchHHHHHHHHhC
Q 013006 248 YFIKEVIREPVYVVGNSLGGFVAVYFAACN 277 (451)
Q Consensus 248 ~ll~~l~~~~v~lvGhS~GG~val~~A~~~ 277 (451)
+.+++.+++.-.++|-|.|+.++..+|...
T Consensus 20 ~aL~e~gi~~~~i~GtSaGAi~aa~~a~g~ 49 (221)
T cd07210 20 AALLEMGLEPSAISGTSAGALVGGLFASGI 49 (221)
T ss_pred HHHHHcCCCceEEEEeCHHHHHHHHHHcCC
Confidence 334455777778999999999999998754
No 260
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=33.23 E-value=49 Score=31.04 Aligned_cols=32 Identities=22% Similarity=0.213 Sum_probs=25.8
Q ss_pred HHHHHHHhCCCCEEEEEeCcchHHHHHHHHhC
Q 013006 246 VCYFIKEVIREPVYVVGNSLGGFVAVYFAACN 277 (451)
Q Consensus 246 v~~ll~~l~~~~v~lvGhS~GG~val~~A~~~ 277 (451)
+.+.+++.++..=.++|-|+|+.++..+|...
T Consensus 28 VL~aLeE~gi~~d~v~GtSaGAiiga~ya~g~ 59 (269)
T cd07227 28 ILQALEEAGIPIDAIGGTSIGSFVGGLYAREA 59 (269)
T ss_pred HHHHHHHcCCCccEEEEECHHHHHHHHHHcCC
Confidence 44445677888778999999999999999764
No 261
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=32.61 E-value=49 Score=31.64 Aligned_cols=33 Identities=27% Similarity=0.216 Sum_probs=27.9
Q ss_pred HHHHHHHHhCCCCEEEEEeCcchHHHHHHHHhC
Q 013006 245 QVCYFIKEVIREPVYVVGNSLGGFVAVYFAACN 277 (451)
Q Consensus 245 dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~~ 277 (451)
-+.+.|++.++++-.+.|-|+|+.++..+|..+
T Consensus 28 GVl~aL~e~gi~~~~iaGtS~GAiva~l~A~g~ 60 (306)
T COG1752 28 GVLKALEEAGIPIDVIAGTSAGAIVAALYAAGM 60 (306)
T ss_pred HHHHHHHHcCCCccEEEecCHHHHHHHHHHcCC
Confidence 455667777899999999999999999999864
No 262
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=32.00 E-value=43 Score=34.84 Aligned_cols=31 Identities=16% Similarity=0.128 Sum_probs=25.8
Q ss_pred HHHH-HHhCCCCEEEEEeCcchHHHHHHHHhC
Q 013006 247 CYFI-KEVIREPVYVVGNSLGGFVAVYFAACN 277 (451)
Q Consensus 247 ~~ll-~~l~~~~v~lvGhS~GG~val~~A~~~ 277 (451)
.+++ +..|++|-.++|||+|=+.|+..|.-.
T Consensus 255 a~ll~~~~GI~Pdav~GHSlGE~aAa~aAGvl 286 (538)
T TIGR02816 255 TQLLCDEFAIKPDFALGYSKGEASMWASLGVW 286 (538)
T ss_pred HHHHHHhcCCCCCEEeecCHHHHHHHHHhCCC
Confidence 3445 578999999999999999999888765
No 263
>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the GTPase domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. The GTPase domain is evolutionary related to P-loop NTPase domains found in a variety of other proteins []. These proteins include Escherichia coli and Bacillus subtilis ffh protein (P48), which seems to be the prokaryotic counterpart of SRP54; signal recognition particle receptor alpha subunit (docking protein), an integral membrane GTP-binding protein which ensures, in conjunction with SRP, the correct targeting of nascent secretory proteins to the endoplasmic reticulum membrane; bacterial FtsY protein, which is believed to play a similar role to that of the docking protein in eukaryotes; the pilA protein from Neisseria gonorrhoeae, the homologue of ftsY; and bacterial flagellar biosynthesis protein flhF.; GO: 0005525 GTP binding, 0006614 SRP-dependent cotranslational protein targeting to membrane; PDB: 2OG2_A 3B9Q_A 3DM9_B 3DMD_B 3E70_C 3DM5_B 2XXA_C 2J28_9 1ZU5_B 1ZU4_A ....
Probab=31.54 E-value=3.1e+02 Score=24.21 Aligned_cols=73 Identities=16% Similarity=0.156 Sum_probs=48.1
Q ss_pred HHHHhh-cCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCC
Q 013006 177 KQLKDL-GKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIR 255 (451)
Q Consensus 177 ~~~~~L-~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~ 255 (451)
..++.+ .++++++.+|.+|... .-....+.+..+++....
T Consensus 74 ~~l~~~~~~~~D~vlIDT~Gr~~---------------------------------------~d~~~~~el~~~~~~~~~ 114 (196)
T PF00448_consen 74 EALEKFRKKGYDLVLIDTAGRSP---------------------------------------RDEELLEELKKLLEALNP 114 (196)
T ss_dssp HHHHHHHHTTSSEEEEEE-SSSS---------------------------------------THHHHHHHHHHHHHHHSS
T ss_pred HHHHHHhhcCCCEEEEecCCcch---------------------------------------hhHHHHHHHHHHhhhcCC
Confidence 334444 3469999999998753 234567788888888877
Q ss_pred CCEEEEEeCcchHHHHHHHHhC--CCccceEEEec
Q 013006 256 EPVYVVGNSLGGFVAVYFAACN--PHLVKGVTLLN 288 (451)
Q Consensus 256 ~~v~lvGhS~GG~val~~A~~~--P~~v~~lvl~~ 288 (451)
..+++|=-+..+.-.+..+..+ .-.+.++|+.-
T Consensus 115 ~~~~LVlsa~~~~~~~~~~~~~~~~~~~~~lIlTK 149 (196)
T PF00448_consen 115 DEVHLVLSATMGQEDLEQALAFYEAFGIDGLILTK 149 (196)
T ss_dssp SEEEEEEEGGGGGHHHHHHHHHHHHSSTCEEEEES
T ss_pred ccceEEEecccChHHHHHHHHHhhcccCceEEEEe
Confidence 7788776666666666544443 22478888754
No 264
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=30.87 E-value=32 Score=34.16 Aligned_cols=47 Identities=17% Similarity=0.440 Sum_probs=31.1
Q ss_pred ccCCCCCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCcccc
Q 013006 393 CQMNGVPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHDE 441 (451)
Q Consensus 393 l~~i~~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~e 441 (451)
+++-.-.+|+|+|++|+|.-... .+.+--.+..+.+.||++|...+.
T Consensus 347 vr~~~~rmlFVYG~nDPW~A~~f--~l~~g~~ds~v~~~PggnHga~I~ 393 (448)
T PF05576_consen 347 VRNNGPRMLFVYGENDPWSAEPF--RLGKGKRDSYVFTAPGGNHGARIA 393 (448)
T ss_pred HHhCCCeEEEEeCCCCCcccCcc--ccCCCCcceEEEEcCCCccccccc
Confidence 44556789999999999874321 122222356677889999975543
No 265
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=30.84 E-value=2.5e+02 Score=27.98 Aligned_cols=117 Identities=11% Similarity=0.072 Sum_probs=67.7
Q ss_pred CcEEEecCCCCChhcHHHHHHhh-cCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccC-CCCCCcc--cccc
Q 013006 160 PPVLFLPGFGVGSFHYEKQLKDL-GKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGF-GDKAQPW--ASEL 235 (451)
Q Consensus 160 p~VlllHG~~~~~~~~~~~~~~L-~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~-~~~~~~~--~~~~ 235 (451)
++|+++--+-.-...+..+-..+ +.+..|+.+|.-=.|......+-. ..+.-.. +...+.. ..+.
T Consensus 2 ~tI~iigT~DTK~~E~~yl~~~i~~~G~~v~~iDvg~~~~~~~~~di~-----------~~eVa~~~g~~~~~~~~~~dR 70 (403)
T PF06792_consen 2 KTIAIIGTLDTKGEELLYLRDQIEAQGVEVLLIDVGTLGEPSFPPDIS-----------REEVARAAGDSIEAVRSSGDR 70 (403)
T ss_pred CEEEEEEccCCCHHHHHHHHHHHHHCCCcEEEEEcCCCCCCCCCCCcC-----------HHHHHHhcCCChHHhhccCCH
Confidence 35555555555456666666666 458999999975555443221110 0000000 0000000 0011
Q ss_pred ccCHHHHHHHHHHHHHHhC----CCCEEEEEeCcchHHHHHHHHhCCCccceEEEe
Q 013006 236 AYSVDLWQDQVCYFIKEVI----REPVYVVGNSLGGFVAVYFAACNPHLVKGVTLL 287 (451)
Q Consensus 236 ~~s~~~~a~dv~~ll~~l~----~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~ 287 (451)
...++.+++.+..++..+- +.=++-+|-|.|..++.......|=-+-++++-
T Consensus 71 g~ai~~M~~ga~~~v~~l~~~g~i~Gvi~~GGs~GT~lat~aMr~LPiG~PKlmVS 126 (403)
T PF06792_consen 71 GEAIEAMARGAARFVSDLYDEGKIDGVIGIGGSGGTALATAAMRALPIGFPKLMVS 126 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCccEEEEecCCccHHHHHHHHHhCCCCCCeEEEE
Confidence 2456677777777777763 345788999999999999998888767676654
No 266
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=30.47 E-value=4.7 Score=37.64 Aligned_cols=16 Identities=44% Similarity=0.789 Sum_probs=8.9
Q ss_pred CCcEEEecCCCCChhc
Q 013006 159 SPPVLFLPGFGVGSFH 174 (451)
Q Consensus 159 ~p~VlllHG~~~~~~~ 174 (451)
-|.+++.||++.....
T Consensus 49 ~p~v~~~h~~~~~~~~ 64 (299)
T COG1073 49 LPAVVFLHGFGSSKEQ 64 (299)
T ss_pred CceEEeccCccccccC
Confidence 4556666666555544
No 267
>COG1576 Uncharacterized conserved protein [Function unknown]
Probab=29.39 E-value=1.6e+02 Score=25.00 Aligned_cols=57 Identities=19% Similarity=0.171 Sum_probs=37.3
Q ss_pred HHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCC
Q 013006 177 KQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIRE 256 (451)
Q Consensus 177 ~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~ 256 (451)
.+.+.+.++-.|++.|.+|--. +-+++++.+..+-+ .|.+
T Consensus 59 ~il~~i~~~~~vi~Ld~~Gk~~---------------------------------------sSe~fA~~l~~~~~-~G~~ 98 (155)
T COG1576 59 AILAAIPKGSYVVLLDIRGKAL---------------------------------------SSEEFADFLERLRD-DGRD 98 (155)
T ss_pred HHHHhcCCCCeEEEEecCCCcC---------------------------------------ChHHHHHHHHHHHh-cCCe
Confidence 4556677788999999998543 45566666654433 3423
Q ss_pred CEEEEEeCcchHHHHHH
Q 013006 257 PVYVVGNSLGGFVAVYF 273 (451)
Q Consensus 257 ~v~lvGhS~GG~val~~ 273 (451)
=.++||-|.|=--++.-
T Consensus 99 i~f~IGG~~Gl~~~~~~ 115 (155)
T COG1576 99 ISFLIGGADGLSEAVKA 115 (155)
T ss_pred EEEEEeCcccCCHHHHH
Confidence 35688999996555544
No 268
>PRK14974 cell division protein FtsY; Provisional
Probab=28.48 E-value=3.1e+02 Score=26.70 Aligned_cols=67 Identities=22% Similarity=0.161 Sum_probs=46.6
Q ss_pred cCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCCCEEEEE
Q 013006 183 GKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVG 262 (451)
Q Consensus 183 ~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~~v~lvG 262 (451)
.++++++.+|..|..... ..+.+.+..+.+.+....+++|.
T Consensus 220 ~~~~DvVLIDTaGr~~~~---------------------------------------~~lm~eL~~i~~~~~pd~~iLVl 260 (336)
T PRK14974 220 ARGIDVVLIDTAGRMHTD---------------------------------------ANLMDELKKIVRVTKPDLVIFVG 260 (336)
T ss_pred hCCCCEEEEECCCccCCc---------------------------------------HHHHHHHHHHHHhhCCceEEEee
Confidence 457999999999875532 34456667777777777778888
Q ss_pred eCcchHHHHHHHHhCC--CccceEEEec
Q 013006 263 NSLGGFVAVYFAACNP--HLVKGVTLLN 288 (451)
Q Consensus 263 hS~GG~val~~A~~~P--~~v~~lvl~~ 288 (451)
-+.-|.-++.-+..+. -.+.++|+.-
T Consensus 261 ~a~~g~d~~~~a~~f~~~~~~~giIlTK 288 (336)
T PRK14974 261 DALAGNDAVEQAREFNEAVGIDGVILTK 288 (336)
T ss_pred ccccchhHHHHHHHHHhcCCCCEEEEee
Confidence 7777777776665542 3577777754
No 269
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=26.92 E-value=76 Score=28.50 Aligned_cols=32 Identities=25% Similarity=0.348 Sum_probs=25.2
Q ss_pred HHHHHHhCCCCEEEEEeCcchHHHHHHHHhCC
Q 013006 247 CYFIKEVIREPVYVVGNSLGGFVAVYFAACNP 278 (451)
Q Consensus 247 ~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P 278 (451)
.+.+++.++..-.+.|.|.|+.++..+|...+
T Consensus 17 l~aL~e~g~~~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 17 LKALAEAGIEPDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred HHHHHHcCCCCCEEEEECHHHHHHHHHHcCCc
Confidence 33445557777789999999999999998765
No 270
>PRK06731 flhF flagellar biosynthesis regulator FlhF; Validated
Probab=26.67 E-value=5.4e+02 Score=24.13 Aligned_cols=75 Identities=9% Similarity=0.038 Sum_probs=47.6
Q ss_pred cHHHHHHhhcC--CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHH
Q 013006 174 HYEKQLKDLGK--DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIK 251 (451)
Q Consensus 174 ~~~~~~~~L~~--~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~ 251 (451)
.....+..+.+ +++++.+|.+|....+ ....+.+..+++
T Consensus 141 ~l~~~l~~l~~~~~~D~ViIDt~Gr~~~~---------------------------------------~~~l~el~~~~~ 181 (270)
T PRK06731 141 AMTRALTYFKEEARVDYILIDTAGKNYRA---------------------------------------SETVEEMIETMG 181 (270)
T ss_pred HHHHHHHHHHhcCCCCEEEEECCCCCcCC---------------------------------------HHHHHHHHHHHh
Confidence 34455566643 6999999999985431 223444555666
Q ss_pred HhCCCCEEEEE-eCcchHHHHHHHHhC-CCccceEEEe
Q 013006 252 EVIREPVYVVG-NSLGGFVAVYFAACN-PHLVKGVTLL 287 (451)
Q Consensus 252 ~l~~~~v~lvG-hS~GG~val~~A~~~-P~~v~~lvl~ 287 (451)
......++||- -++++.-+...+.++ +-.+.++|+.
T Consensus 182 ~~~~~~~~LVl~a~~~~~d~~~~~~~f~~~~~~~~I~T 219 (270)
T PRK06731 182 QVEPDYICLTLSASMKSKDMIEIITNFKDIHIDGIVFT 219 (270)
T ss_pred hhCCCeEEEEEcCccCHHHHHHHHHHhCCCCCCEEEEE
Confidence 55555566654 467787777777765 3457777775
No 271
>PF07380 Pneumo_M2: Pneumovirus M2 protein; InterPro: IPR009969 This family consists of several Pneumovirus M2 proteins. The M2-1 protein of respiratory syncytial virus (RSV) is a transcription processivity factor that is essential for virus replication [].
Probab=26.15 E-value=1.2e+02 Score=22.30 Aligned_cols=20 Identities=10% Similarity=0.109 Sum_probs=18.1
Q ss_pred cCHHHHHHHHHHHHHHhCCC
Q 013006 237 YSVDLWQDQVCYFIKEVIRE 256 (451)
Q Consensus 237 ~s~~~~a~dv~~ll~~l~~~ 256 (451)
.+..++.+++..++.++|+.
T Consensus 60 WTsq~Lid~~q~fLqhlgis 79 (89)
T PF07380_consen 60 WTSQDLIDATQNFLQHLGIS 79 (89)
T ss_pred cchHHHHHHHHHHHHHcCCC
Confidence 48899999999999999973
No 272
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=25.81 E-value=92 Score=26.83 Aligned_cols=30 Identities=27% Similarity=0.329 Sum_probs=23.5
Q ss_pred HHHHhCCCCEEEEEeCcchHHHHHHHHhCC
Q 013006 249 FIKEVIREPVYVVGNSLGGFVAVYFAACNP 278 (451)
Q Consensus 249 ll~~l~~~~v~lvGhS~GG~val~~A~~~P 278 (451)
.+++.++..=.++|-|.|+.++..++...+
T Consensus 21 ~L~e~g~~~d~i~GtSaGAi~aa~~a~g~~ 50 (175)
T cd07228 21 ALEEEGIEIDIIAGSSIGALVGALYAAGHL 50 (175)
T ss_pred HHHHCCCCeeEEEEeCHHHHHHHHHHcCCC
Confidence 334556766778999999999999987654
No 273
>TIGR00064 ftsY signal recognition particle-docking protein FtsY. There is a weak division between FtsY and SRP54; both are GTPases. In E.coli, ftsY is an essential gene located in an operon with cell division genes ftsE and ftsX, but its apparent function is as the signal recognition particle docking protein.
Probab=23.90 E-value=4.9e+02 Score=24.34 Aligned_cols=24 Identities=17% Similarity=0.130 Sum_probs=17.1
Q ss_pred HHHHHhhcCCceEEEEcCCCCCCC
Q 013006 176 EKQLKDLGKDYRAWAIDFLGQGMS 199 (451)
Q Consensus 176 ~~~~~~L~~~~~Vi~~D~rG~G~S 199 (451)
..+.....++|+++.+|.+|....
T Consensus 145 ~~l~~~~~~~~D~ViIDT~G~~~~ 168 (272)
T TIGR00064 145 DAIQKAKARNIDVVLIDTAGRLQN 168 (272)
T ss_pred HHHHHHHHCCCCEEEEeCCCCCcc
Confidence 333333456899999999998654
No 274
>COG3657 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=23.23 E-value=1.1e+02 Score=23.58 Aligned_cols=35 Identities=20% Similarity=0.348 Sum_probs=25.3
Q ss_pred CCCCCccceeeecCCeEEEEeecCCCCCCCCcEEEecCCC
Q 013006 130 SGAPITSCFWEWKPKFNVHYEKAGCENVNSPPVLFLPGFG 169 (451)
Q Consensus 130 ~~~~~~~~~~~~~~g~~l~y~~~g~~~~~~p~VlllHG~~ 169 (451)
.+..+.+-.+..-+|.+++|...|. -.||++.|.-
T Consensus 46 vgeGV~ELRId~GpGyRvY~~~~g~-----v~i~lLCgGd 80 (100)
T COG3657 46 VGEGVSELRIDHGPGYRVYFQQRGL-----VLILLLCGGD 80 (100)
T ss_pred cccchhhheeccCCceEEEEEecCc-----EEEEEeccCc
Confidence 3556777777778999999999883 4566666643
No 275
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=23.02 E-value=2.4e+02 Score=24.13 Aligned_cols=53 Identities=13% Similarity=0.130 Sum_probs=31.7
Q ss_pred CHHHHHHHHHHHHHHh--CCCCEEEEEeCcchHHHHHHHHhCCCccceEEEeccC
Q 013006 238 SVDLWQDQVCYFIKEV--IREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNAT 290 (451)
Q Consensus 238 s~~~~a~dv~~ll~~l--~~~~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~ 290 (451)
..+.+.+.+.++++.+ ..++|.++|-|..|.+.+.++...++.+..++=.++.
T Consensus 49 ~~~~~~~~l~~~L~~~~~~gk~I~~yGA~~kg~tlln~~g~~~~~I~~vvD~np~ 103 (160)
T PF08484_consen 49 RVEQSKAELREFLEKLKAEGKRIAGYGAGAKGNTLLNYFGLDNDLIDYVVDDNPL 103 (160)
T ss_dssp HHHHHHHHHHHHHHHHHHTT--EEEE---SHHHHHHHHHT--TTTS--EEES-GG
T ss_pred HHHHHHHHHHHHHHHHHHcCCEEEEECcchHHHHHHHHhCCCcceeEEEEeCChh
Confidence 4455556666666555 3478999999999999999988877778888777763
No 276
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=22.73 E-value=50 Score=33.27 Aligned_cols=37 Identities=22% Similarity=0.212 Sum_probs=27.0
Q ss_pred HHHHHHHhCCCCEEEEEeCcchHHHHHHHHhCCCccc
Q 013006 246 VCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVK 282 (451)
Q Consensus 246 v~~ll~~l~~~~v~lvGhS~GG~val~~A~~~P~~v~ 282 (451)
+...+.+.++.+=++.|-|.|+.+|..+|...++.+.
T Consensus 91 VLkaL~E~gl~p~vIsGTSaGAivAal~as~~~eel~ 127 (421)
T cd07230 91 VLKALFEANLLPRIISGSSAGSIVAAILCTHTDEEIP 127 (421)
T ss_pred HHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCHHHHH
Confidence 3333444467777899999999999999987665543
No 277
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=22.73 E-value=87 Score=32.75 Aligned_cols=35 Identities=26% Similarity=0.209 Sum_probs=27.9
Q ss_pred EEEEEeCcchHHHHHHHHhC-CCccceEEEeccCCC
Q 013006 258 VYVVGNSLGGFVAVYFAACN-PHLVKGVTLLNATPF 292 (451)
Q Consensus 258 v~lvGhS~GG~val~~A~~~-P~~v~~lvl~~~~~~ 292 (451)
++--+.|-||..++..|.+. ...|.+++.-.|...
T Consensus 287 VIAssvSNGGgAal~AAEqD~~glIdgVvv~EP~v~ 322 (690)
T PF10605_consen 287 VIASSVSNGGGAALAAAEQDTQGLIDGVVVSEPNVN 322 (690)
T ss_pred EEEEeecCccHHHHhHhhcccCCceeeEEecCCccC
Confidence 45568999999999998875 357999999887643
No 278
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=22.44 E-value=1.2e+02 Score=26.04 Aligned_cols=29 Identities=28% Similarity=0.242 Sum_probs=22.5
Q ss_pred HHHHhCCCCEEEEEeCcchHHHHHHHHhC
Q 013006 249 FIKEVIREPVYVVGNSLGGFVAVYFAACN 277 (451)
Q Consensus 249 ll~~l~~~~v~lvGhS~GG~val~~A~~~ 277 (451)
.|++.+...-.++|-|.|+.++..++...
T Consensus 21 ~L~~~~~~~d~i~GtSaGal~a~~~a~g~ 49 (175)
T cd07205 21 ALEEAGIPIDIVSGTSAGAIVGALYAAGY 49 (175)
T ss_pred HHHHcCCCeeEEEEECHHHHHHHHHHcCC
Confidence 34445666668999999999999998654
No 279
>COG3933 Transcriptional antiterminator [Transcription]
Probab=22.34 E-value=4.5e+02 Score=26.62 Aligned_cols=75 Identities=12% Similarity=0.037 Sum_probs=56.8
Q ss_pred CcEEEecCCCCChhcHHHHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccccCH
Q 013006 160 PPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSV 239 (451)
Q Consensus 160 p~VlllHG~~~~~~~~~~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~ 239 (451)
..||+.||... +.+....+..|-..--+.++|.|= ..++
T Consensus 110 ~vIiiAHG~sT-ASSmaevanrLL~~~~~~aiDMPL----------------------------------------dvsp 148 (470)
T COG3933 110 KVIIIAHGYST-ASSMAEVANRLLGEEIFIAIDMPL----------------------------------------DVSP 148 (470)
T ss_pred eEEEEecCcch-HHHHHHHHHHHhhccceeeecCCC----------------------------------------cCCH
Confidence 47888899875 555666777765455678888862 1588
Q ss_pred HHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHH
Q 013006 240 DLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAA 275 (451)
Q Consensus 240 ~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~ 275 (451)
.+..+.+.+-+++....+=.++=.+||....+.=..
T Consensus 149 ~~vle~l~e~~k~~~~~~GlllLVDMGSL~~f~~~i 184 (470)
T COG3933 149 SDVLEKLKEYLKERDYRSGLLLLVDMGSLTSFGSII 184 (470)
T ss_pred HHHHHHHHHHHHhcCccCceEEEEecchHHHHHHHH
Confidence 899999999999988888677788999988775443
No 280
>KOG0781 consensus Signal recognition particle receptor, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=22.30 E-value=2e+02 Score=29.34 Aligned_cols=87 Identities=22% Similarity=0.262 Sum_probs=57.0
Q ss_pred EEecCCCCChhcHHHHHHhh--cCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccccCHH
Q 013006 163 LFLPGFGVGSFHYEKQLKDL--GKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVD 240 (451)
Q Consensus 163 lllHG~~~~~~~~~~~~~~L--~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~ 240 (451)
||=-|++.+...-...+-.. .++|+|+.+|.-|.-... +
T Consensus 442 lfekGYgkd~a~vak~AI~~a~~~gfDVvLiDTAGR~~~~---------------------------------------~ 482 (587)
T KOG0781|consen 442 LFEKGYGKDAAGVAKEAIQEARNQGFDVVLIDTAGRMHNN---------------------------------------A 482 (587)
T ss_pred HHhhhcCCChHHHHHHHHHHHHhcCCCEEEEeccccccCC---------------------------------------h
Confidence 44567766654444333233 347999999998865542 2
Q ss_pred HHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHh---------CCCccceEEEec
Q 013006 241 LWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAAC---------NPHLVKGVTLLN 288 (451)
Q Consensus 241 ~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~---------~P~~v~~lvl~~ 288 (451)
.+...+..+++.-..+.|+.||--+=|.=++.-+.. .|..+.++++.-
T Consensus 483 ~lm~~l~k~~~~~~pd~i~~vgealvg~dsv~q~~~fn~al~~~~~~r~id~~~ltk 539 (587)
T KOG0781|consen 483 PLMTSLAKLIKVNKPDLILFVGEALVGNDSVDQLKKFNRALADHSTPRLIDGILLTK 539 (587)
T ss_pred hHHHHHHHHHhcCCCceEEEehhhhhCcHHHHHHHHHHHHHhcCCCccccceEEEEe
Confidence 345567777777778889999998888766654432 245678877754
No 281
>PF03610 EIIA-man: PTS system fructose IIA component; InterPro: IPR004701 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) [, ] is a major carbohydrate transport system in bacteria. The PTS catalyses the phosphorylation of incoming sugar substrates and coupled with translocation across the cell membrane, makes the PTS a link between the uptake and metabolism of sugars. The general mechanism of the PTS is the following: a phosphoryl group from phosphoenolpyruvate (PEP) is transferred via a signal transduction pathway, to enzyme I (EI) which in turn transfers it to a phosphoryl carrier, the histidine protein (HPr). Phospho-HPr then transfers the phosphoryl group to a sugar-specific permease, a membrane-bound complex known as enzyme 2 (EII), which transports the sugar to the cell. EII consists of at least three structurally distinct domains IIA, IIB and IIC []. These can either be fused together in a single polypeptide chain or exist as two or three interactive chains, formerly called enzymes II (EII) and III (EIII). The first domain (IIA or EIIA) carries the first permease-specific phosphorylation site, a histidine which is phosphorylated by phospho-HPr. The second domain (IIB or EIIB) is phosphorylated by phospho-IIA on a cysteinyl or histidyl residue, depending on the sugar transported. Finally, the phosphoryl group is transferred from the IIB domain to the sugar substrate concomitantly with the sugar uptake processed by the IIC domain. This third domain (IIC or EIIC) forms the translocation channel and the specific substrate-binding site. An additional transmembrane domain IID, homologous to IIC, can be found in some PTSs, e.g. for mannose [, , , ]. The Man family is unique in several respects among PTS permease families. It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of Escherichia coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine, N-acetylglucosamine, and other sugars. Other members of this can transport sorbose, fructose and N-acetylglucosamine. This family is specific for IIA and IIB components.; GO: 0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system, 0016021 integral to membrane; PDB: 3GDW_B 2JZN_A 1VSQ_A 2JZO_B 1VRC_A 1PDO_A 3GX1_A 3B48_B 3BED_B 3IPR_C ....
Probab=21.43 E-value=4.1e+02 Score=20.90 Aligned_cols=74 Identities=16% Similarity=0.101 Sum_probs=46.6
Q ss_pred cEEEecCCCCChhcHHHHHHhh-cC-CceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccccC
Q 013006 161 PVLFLPGFGVGSFHYEKQLKDL-GK-DYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYS 238 (451)
Q Consensus 161 ~VlllHG~~~~~~~~~~~~~~L-~~-~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s 238 (451)
.||..|| .-+......+..+ .. .-.+.++++.-. .+
T Consensus 2 iii~sHG--~~A~g~~~~~~~i~G~~~~~i~~~~~~~~----------------------------------------~~ 39 (116)
T PF03610_consen 2 IIIASHG--SLAEGLLESAEMILGEDQDNIEAVDLYPD----------------------------------------ES 39 (116)
T ss_dssp EEEEEET--THHHHHHHHHHHHHTSTCSSEEEEEETTT----------------------------------------SC
T ss_pred EEEEECc--HHHHHHHHHHHHHcCCCcccEEEEECcCC----------------------------------------CC
Confidence 4677899 3455555556555 44 346777775311 37
Q ss_pred HHHHHHHHHHHHHHhCCCCEEEEEeCcchHHHHHHHHh
Q 013006 239 VDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAAC 276 (451)
Q Consensus 239 ~~~~a~dv~~ll~~l~~~~v~lvGhS~GG~val~~A~~ 276 (451)
.+++.+.+.+.++.+....-++|=.+++|......+.+
T Consensus 40 ~~~~~~~l~~~i~~~~~~~~vlil~Dl~ggsp~n~a~~ 77 (116)
T PF03610_consen 40 IEDFEEKLEEAIEELDEGDGVLILTDLGGGSPFNEAAR 77 (116)
T ss_dssp HHHHHHHHHHHHHHCCTTSEEEEEESSTTSHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCCCcEEEEeeCCCCccchHHHH
Confidence 88999999999988875555555555555554444443
No 282
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=21.31 E-value=94 Score=28.82 Aligned_cols=23 Identities=22% Similarity=0.356 Sum_probs=15.8
Q ss_pred HHHHHh-CCCCEEEEEeCcchHHH
Q 013006 248 YFIKEV-IREPVYVVGNSLGGFVA 270 (451)
Q Consensus 248 ~ll~~l-~~~~v~lvGhS~GG~va 270 (451)
.+++.+ .+..|+++|||+|..=.
T Consensus 226 ~~~~~l~~i~~I~i~GhSl~~~D~ 249 (270)
T PF14253_consen 226 SFFESLSDIDEIIIYGHSLGEVDY 249 (270)
T ss_pred HHHhhhcCCCEEEEEeCCCchhhH
Confidence 334444 35789999999997533
No 283
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=20.70 E-value=1.4e+02 Score=28.06 Aligned_cols=51 Identities=16% Similarity=0.101 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHhCC---CCEEEEEeCcchHHHHHHHH---hCCCccceEEEeccCC
Q 013006 241 LWQDQVCYFIKEVIR---EPVYVVGNSLGGFVAVYFAA---CNPHLVKGVTLLNATP 291 (451)
Q Consensus 241 ~~a~dv~~ll~~l~~---~~v~lvGhS~GG~val~~A~---~~P~~v~~lvl~~~~~ 291 (451)
.+.+.|..-++.+.. .+++|.|.|+|++-+..... ..-+++.+.++.+++.
T Consensus 91 aL~~aV~~~~~~lP~~~RPkL~l~GeSLGa~g~~~af~~~~~~~~~vdGalw~GpP~ 147 (289)
T PF10081_consen 91 ALFEAVYARWSTLPEDRRPKLYLYGESLGAYGGEAAFDGLDDLRDRVDGALWVGPPF 147 (289)
T ss_pred HHHHHHHHHHHhCCcccCCeEEEeccCccccchhhhhccHHHhhhhcceEEEeCCCC
Confidence 344444444455532 46999999999886654332 2335799999999853
No 284
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=20.58 E-value=1.4e+02 Score=28.58 Aligned_cols=19 Identities=26% Similarity=0.564 Sum_probs=16.2
Q ss_pred EEEEeCcchHHHHHHHHhC
Q 013006 259 YVVGNSLGGFVAVYFAACN 277 (451)
Q Consensus 259 ~lvGhS~GG~val~~A~~~ 277 (451)
.+.|-|+||.+|+.++..+
T Consensus 35 ~i~GTStGgiIA~~la~g~ 53 (312)
T cd07212 35 WIAGTSTGGILALALLHGK 53 (312)
T ss_pred EEEeeChHHHHHHHHHcCC
Confidence 4779999999999998754
No 285
>PF02590 SPOUT_MTase: Predicted SPOUT methyltransferase; InterPro: IPR003742 This family of proteins are predicted to be SPOUT methyltransferases []. ; GO: 0008168 methyltransferase activity, 0006364 rRNA processing, 0005737 cytoplasm; PDB: 1VH0_E 4FAK_A 1TO0_G 1O6D_A 1NS5_B.
Probab=20.42 E-value=1.8e+02 Score=24.76 Aligned_cols=69 Identities=14% Similarity=0.146 Sum_probs=38.2
Q ss_pred HHHHhhcCCceEEEEcCCCCCCCCCCCCCCCCCCCCCchhhhhccccCCCCCCccccccccCHHHHHHHHHHHHHHhCCC
Q 013006 177 KQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVIRE 256 (451)
Q Consensus 177 ~~~~~L~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~s~~~~a~dv~~ll~~l~~~ 256 (451)
.+...+.++-.+++.|-.|.- ++-+++++.+..+...-..+
T Consensus 59 ~il~~i~~~~~~i~Ld~~Gk~---------------------------------------~sS~~fA~~l~~~~~~g~~~ 99 (155)
T PF02590_consen 59 RILKKIPPNDYVILLDERGKQ---------------------------------------LSSEEFAKKLERWMNQGKSD 99 (155)
T ss_dssp HHHCTSHTTSEEEEE-TTSEE-----------------------------------------HHHHHHHHHHHHHTTS-E
T ss_pred HHHhhccCCCEEEEEcCCCcc---------------------------------------CChHHHHHHHHHHHhcCCce
Confidence 344555567889999988753 46677777777666552224
Q ss_pred CEEEEEeCcchHHHHHHHHhCCCccceEEEeccC
Q 013006 257 PVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNAT 290 (451)
Q Consensus 257 ~v~lvGhS~GG~val~~A~~~P~~v~~lvl~~~~ 290 (451)
=+.+||-+.|=.-.+.- +....+.+++.
T Consensus 100 i~F~IGG~~G~~~~~~~------~a~~~lSLS~m 127 (155)
T PF02590_consen 100 IVFIIGGADGLSEEVRK------RADEKLSLSKM 127 (155)
T ss_dssp EEEEE-BTTB--HHHHH------H-SEEEES-SS
T ss_pred EEEEEecCCCCCHHHHh------hcCceEEEecC
Confidence 46789999993332221 23456666654
No 286
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=20.36 E-value=1.7e+02 Score=27.59 Aligned_cols=39 Identities=21% Similarity=0.344 Sum_probs=25.9
Q ss_pred CHHHHHHH-HHHHHHHhC-CCCEEEEEeCcchHHHHHHHHh
Q 013006 238 SVDLWQDQ-VCYFIKEVI-REPVYVVGNSLGGFVAVYFAAC 276 (451)
Q Consensus 238 s~~~~a~d-v~~ll~~l~-~~~v~lvGhS~GG~val~~A~~ 276 (451)
.+++-+.+ ...+.+... .+++.++|+|-|+++|-.+|..
T Consensus 72 g~~~~I~~ay~~l~~~~~~gd~I~lfGFSRGA~~AR~~a~~ 112 (277)
T PF09994_consen 72 GIEARIRDAYRFLSKNYEPGDRIYLFGFSRGAYTARAFANM 112 (277)
T ss_pred chHHHHHHHHHHHHhccCCcceEEEEecCccHHHHHHHHHH
Confidence 33333333 333335443 4679999999999999988865
No 287
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=20.16 E-value=65 Score=32.46 Aligned_cols=40 Identities=20% Similarity=0.330 Sum_probs=24.1
Q ss_pred CCEEEEeeCCCCCCChHHHHHHHHHCCCCcEEEeCCCCCCccc
Q 013006 398 VPICLIYGKEDPWVKPVWGLQVKRQVPEAPYYEISPAGHCPHD 440 (451)
Q Consensus 398 ~PvLii~G~~D~~v~~~~~~~l~~~lp~~~~~~i~~~gH~~~~ 440 (451)
-.|+++.|+.|||........ .-+.....+||+++||.-+
T Consensus 377 tnviFtNG~~DPW~~lgv~~~---~~~~~~~~~I~g~~Hc~Dl 416 (434)
T PF05577_consen 377 TNVIFTNGELDPWRALGVTSD---SSDSVPAIVIPGGAHCSDL 416 (434)
T ss_dssp -SEEEEEETT-CCGGGS--S----SSSSEEEEEETT--TTGGG
T ss_pred CeEEeeCCCCCCcccccCCCC---CCCCcccEEECCCeeeccc
Confidence 489999999999987652221 1233456789999998544
No 288
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=20.02 E-value=1.3e+02 Score=27.92 Aligned_cols=32 Identities=19% Similarity=0.062 Sum_probs=23.7
Q ss_pred HHHHhCCC-CEEEEEeCcchHHHHHHHHhCCCc
Q 013006 249 FIKEVIRE-PVYVVGNSLGGFVAVYFAACNPHL 280 (451)
Q Consensus 249 ll~~l~~~-~v~lvGhS~GG~val~~A~~~P~~ 280 (451)
.+.+.++. .=.++|.|.|+.++..++...+.+
T Consensus 19 al~e~~~~~fd~i~GtSaGAi~a~~~~~g~~~~ 51 (266)
T cd07208 19 AFLEAGIRPFDLVIGVSAGALNAASYLSGQRGR 51 (266)
T ss_pred HHHHcCCCCCCEEEEECHHHHhHHHHHhCCcch
Confidence 33444555 457899999999999998876543
Done!