Query 013008
Match_columns 451
No_of_seqs 348 out of 2562
Neff 9.1
Searched_HMMs 46136
Date Fri Mar 29 08:35:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013008.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/013008hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG4992 ArgD Ornithine/acetylo 100.0 8.1E-86 1.8E-90 626.9 39.9 379 61-447 5-400 (404)
2 COG0160 GabT 4-aminobutyrate a 100.0 1.8E-76 4E-81 579.8 40.2 377 60-446 16-446 (447)
3 KOG1402 Ornithine aminotransfe 100.0 5.9E-75 1.3E-79 527.6 29.0 382 61-444 22-426 (427)
4 COG0001 HemL Glutamate-1-semia 100.0 1.1E-71 2.4E-76 535.5 35.4 382 39-448 4-431 (432)
5 COG0161 BioA Adenosylmethionin 100.0 3.1E-71 6.7E-76 539.2 36.3 376 69-449 9-447 (449)
6 PRK05965 hypothetical protein; 100.0 2E-69 4.3E-74 548.5 40.6 368 80-451 28-453 (459)
7 PRK07482 hypothetical protein; 100.0 3.2E-69 7E-74 547.2 41.3 364 80-446 32-455 (461)
8 PRK07678 aminotransferase; Val 100.0 1.5E-68 3.2E-73 541.5 41.3 384 61-447 6-451 (451)
9 PRK11522 putrescine--2-oxoglut 100.0 3.1E-68 6.8E-73 538.1 39.2 366 77-448 60-454 (459)
10 PRK06943 adenosylmethionine--8 100.0 7.2E-68 1.6E-72 535.7 41.4 363 80-447 36-448 (453)
11 PRK08742 adenosylmethionine--8 100.0 1.4E-67 3.1E-72 534.5 41.5 361 81-446 47-468 (472)
12 KOG1404 Alanine-glyoxylate ami 100.0 1.7E-68 3.7E-73 496.9 31.0 354 77-439 29-432 (442)
13 TIGR03372 putres_am_tran putre 100.0 4.9E-68 1.1E-72 533.0 36.9 357 81-443 58-442 (442)
14 PRK06938 diaminobutyrate--2-ox 100.0 1.9E-67 4.1E-72 533.6 41.0 373 64-446 26-461 (464)
15 PRK07483 hypothetical protein; 100.0 1.5E-67 3.2E-72 532.5 39.9 370 76-448 8-440 (443)
16 PRK07481 hypothetical protein; 100.0 3.6E-67 7.7E-72 531.1 39.3 363 80-447 24-447 (449)
17 PRK06062 hypothetical protein; 100.0 5.8E-67 1.2E-71 529.3 40.4 371 66-448 17-448 (451)
18 PRK06105 aminotransferase; Pro 100.0 9.5E-67 2.1E-71 529.0 40.7 378 64-447 7-451 (460)
19 PRK07030 adenosylmethionine--8 100.0 1.3E-66 2.7E-71 527.8 40.7 361 81-446 30-447 (466)
20 PRK06058 4-aminobutyrate amino 100.0 1.9E-66 4.1E-71 526.3 41.1 359 79-446 37-443 (443)
21 PRK06916 adenosylmethionine--8 100.0 1.8E-66 3.8E-71 527.0 40.5 364 79-447 37-457 (460)
22 PRK04013 argD acetylornithine/ 100.0 2.2E-66 4.7E-71 509.6 39.2 354 78-447 4-362 (364)
23 PRK05639 4-aminobutyrate amino 100.0 3.4E-66 7.4E-71 523.5 41.8 359 79-447 34-445 (457)
24 PRK06931 diaminobutyrate--2-ox 100.0 3.1E-66 6.8E-71 524.6 41.6 375 62-446 19-455 (459)
25 PRK07495 4-aminobutyrate amino 100.0 6.7E-66 1.5E-70 518.2 42.3 367 73-448 14-424 (425)
26 PRK04612 argD acetylornithine 100.0 8.9E-66 1.9E-70 514.7 42.3 368 76-446 18-404 (408)
27 PRK07480 putative aminotransfe 100.0 4.3E-66 9.3E-71 523.2 40.3 363 80-447 32-450 (456)
28 PLN02760 4-aminobutyrate:pyruv 100.0 3.3E-66 7.1E-71 527.9 39.6 363 80-447 71-493 (504)
29 PRK08593 4-aminobutyrate amino 100.0 8E-66 1.7E-70 520.6 41.4 378 61-448 3-432 (445)
30 TIGR03246 arg_catab_astC succi 100.0 1.1E-65 2.5E-70 515.2 41.7 368 74-446 11-396 (397)
31 KOG1401 Acetylornithine aminot 100.0 1.8E-66 3.9E-71 487.2 33.2 388 48-447 15-432 (433)
32 PRK07036 hypothetical protein; 100.0 8.7E-66 1.9E-70 522.3 41.1 363 80-447 33-454 (466)
33 PLN00144 acetylornithine trans 100.0 8.1E-66 1.8E-70 512.3 39.3 363 84-446 1-381 (382)
34 PRK12403 putative aminotransfe 100.0 3.1E-65 6.7E-70 517.9 41.3 380 62-447 11-454 (460)
35 TIGR00709 dat 2,4-diaminobutyr 100.0 3.6E-65 7.7E-70 516.4 39.6 358 79-446 20-436 (442)
36 PRK06541 hypothetical protein; 100.0 9.2E-65 2E-69 514.0 41.6 381 64-447 11-457 (460)
37 PRK12389 glutamate-1-semialdeh 100.0 7E-65 1.5E-69 512.6 39.4 383 38-445 2-427 (428)
38 PRK06917 hypothetical protein; 100.0 8E-65 1.7E-69 513.1 39.7 367 79-449 13-441 (447)
39 PRK13360 omega amino acid--pyr 100.0 7.4E-65 1.6E-69 512.7 39.2 364 78-446 26-441 (442)
40 PRK06173 adenosylmethionine--8 100.0 7.1E-65 1.5E-69 510.4 38.5 362 82-448 28-428 (429)
41 PRK12381 bifunctional succinyl 100.0 2.6E-64 5.6E-69 506.8 41.8 367 77-448 18-402 (406)
42 PRK05630 adenosylmethionine--8 100.0 1.2E-64 2.6E-69 508.2 38.8 360 80-445 22-420 (422)
43 PLN02482 glutamate-1-semialdeh 100.0 1.4E-64 3E-69 511.7 39.0 382 38-446 49-474 (474)
44 PRK06082 4-aminobutyrate amino 100.0 2.8E-64 6.1E-69 510.3 41.1 358 79-449 53-455 (459)
45 PRK03715 argD acetylornithine 100.0 2.1E-64 4.5E-69 503.7 38.9 362 77-446 15-394 (395)
46 PRK09221 beta alanine--pyruvat 100.0 2.2E-64 4.8E-69 509.7 39.4 364 78-446 29-444 (445)
47 PRK07986 adenosylmethionine--8 100.0 2.1E-64 4.5E-69 506.4 38.8 359 81-445 26-423 (428)
48 PRK07046 aminotransferase; Val 100.0 2.3E-64 5E-69 509.6 38.9 381 38-447 26-452 (453)
49 PRK08117 4-aminobutyrate amino 100.0 7.7E-64 1.7E-68 507.2 40.7 359 81-448 26-432 (433)
50 PRK09792 4-aminobutyrate trans 100.0 1.2E-63 2.5E-68 502.7 40.9 362 74-444 15-420 (421)
51 PRK06777 4-aminobutyrate amino 100.0 1.6E-63 3.6E-68 501.6 41.6 355 81-444 23-420 (421)
52 PRK05769 4-aminobutyrate amino 100.0 2.2E-63 4.8E-68 502.3 42.0 371 64-446 19-440 (441)
53 PLN02624 ornithine-delta-amino 100.0 2.9E-63 6.2E-68 505.8 43.0 394 50-445 27-444 (474)
54 PRK08360 4-aminobutyrate amino 100.0 4.3E-63 9.3E-68 500.0 42.1 375 63-448 4-429 (443)
55 TIGR00700 GABAtrnsam 4-aminobu 100.0 2.3E-63 4.9E-68 501.5 39.3 358 78-444 13-419 (420)
56 PRK06918 4-aminobutyrate amino 100.0 6.3E-63 1.4E-67 502.0 42.6 381 61-450 16-448 (451)
57 TIGR02407 ectoine_ectB diamino 100.0 2.2E-63 4.9E-68 499.3 37.6 362 74-445 10-412 (412)
58 PRK05964 adenosylmethionine--8 100.0 5E-63 1.1E-67 499.7 39.9 363 79-446 23-423 (423)
59 PRK00615 glutamate-1-semialdeh 100.0 4.2E-63 9.1E-68 497.2 37.8 381 39-446 4-429 (433)
60 PRK09264 diaminobutyrate--2-ox 100.0 1.1E-62 2.5E-67 496.5 39.3 366 74-449 14-420 (425)
61 PRK04073 rocD ornithine--oxo-a 100.0 3.6E-62 7.9E-67 490.4 40.7 379 62-443 4-395 (396)
62 PRK01278 argD acetylornithine 100.0 5.7E-62 1.2E-66 488.4 41.2 364 77-445 10-388 (389)
63 PRK06148 hypothetical protein; 100.0 4.1E-62 9E-67 534.1 40.7 370 64-446 587-1011(1013)
64 TIGR00699 GABAtrns_euk 4-amino 100.0 1.4E-61 3.1E-66 486.6 39.1 375 61-443 21-464 (464)
65 PRK05093 argD bifunctional N-s 100.0 6E-60 1.3E-64 475.4 42.1 366 76-446 18-401 (403)
66 PRK08297 L-lysine aminotransfe 100.0 4.9E-60 1.1E-64 477.8 35.2 362 79-446 25-442 (443)
67 TIGR00508 bioA adenosylmethion 100.0 2E-59 4.3E-64 472.0 39.0 360 81-445 28-426 (427)
68 PRK06149 hypothetical protein; 100.0 1.8E-59 4E-64 513.4 40.9 373 61-445 545-970 (972)
69 TIGR00713 hemL glutamate-1-sem 100.0 1.8E-59 3.8E-64 475.1 36.0 380 42-446 2-423 (423)
70 PRK02936 argD acetylornithine 100.0 7.9E-59 1.7E-63 463.9 39.1 356 77-443 8-377 (377)
71 PLN02974 adenosylmethionine-8- 100.0 6E-59 1.3E-63 492.0 39.8 378 64-443 316-816 (817)
72 PRK03244 argD acetylornithine 100.0 2.5E-58 5.4E-63 463.5 41.2 364 72-447 17-396 (398)
73 TIGR01885 Orn_aminotrans ornit 100.0 5.3E-58 1.1E-62 461.2 40.0 378 64-443 3-400 (401)
74 PRK00062 glutamate-1-semialdeh 100.0 2.7E-58 5.9E-63 465.0 37.2 381 41-446 3-425 (426)
75 PF00202 Aminotran_3: Aminotra 100.0 2.9E-59 6.3E-64 457.7 26.9 308 83-393 1-338 (339)
76 TIGR03251 LAT_fam L-lysine 6-t 100.0 3.1E-58 6.8E-63 464.2 32.3 369 67-441 6-430 (431)
77 PRK02627 acetylornithine amino 100.0 6.8E-57 1.5E-61 453.1 41.8 373 68-446 9-395 (396)
78 PRK08088 4-aminobutyrate amino 100.0 5.5E-57 1.2E-61 456.0 40.2 358 80-446 23-424 (425)
79 PTZ00125 ornithine aminotransf 100.0 1.3E-56 2.9E-61 451.5 39.9 375 73-449 6-399 (400)
80 PRK00854 rocD ornithine--oxo-a 100.0 1.6E-56 3.4E-61 450.9 40.2 380 62-444 5-400 (401)
81 PRK04260 acetylornithine amino 100.0 5.4E-55 1.2E-59 435.6 39.8 354 77-443 8-375 (375)
82 PRK06209 glutamate-1-semialdeh 100.0 2.1E-54 4.4E-59 436.5 35.0 369 42-447 1-407 (431)
83 cd00610 OAT_like Acetyl ornith 100.0 1.6E-53 3.5E-58 431.0 39.5 355 79-443 17-413 (413)
84 KOG1403 Predicted alanine-glyo 100.0 4E-53 8.7E-58 380.5 21.1 357 77-446 26-438 (452)
85 TIGR00707 argD acetylornithine 100.0 1.2E-50 2.7E-55 405.3 39.4 362 76-443 5-379 (379)
86 KOG1405 4-aminobutyrate aminot 100.0 2.1E-42 4.5E-47 317.6 23.8 383 52-445 33-483 (484)
87 PRK07505 hypothetical protein; 100.0 2.7E-40 6E-45 332.7 30.0 358 61-445 7-399 (402)
88 PLN02822 serine palmitoyltrans 100.0 2.2E-37 4.7E-42 316.1 33.8 329 83-447 95-479 (481)
89 PRK13393 5-aminolevulinate syn 100.0 1.7E-34 3.7E-39 290.9 33.6 318 96-446 43-397 (406)
90 TIGR01821 5aminolev_synth 5-am 100.0 1E-33 2.2E-38 285.1 33.9 318 96-446 43-397 (402)
91 COG0156 BioF 7-keto-8-aminopel 100.0 4.3E-34 9.2E-39 278.5 29.4 321 86-442 28-387 (388)
92 PRK09064 5-aminolevulinate syn 100.0 5.5E-33 1.2E-37 280.3 31.8 317 97-446 45-398 (407)
93 PLN02955 8-amino-7-oxononanoat 100.0 3.3E-33 7.1E-38 278.2 28.9 333 96-446 100-462 (476)
94 PRK07179 hypothetical protein; 100.0 5E-31 1.1E-35 265.9 32.9 331 71-446 35-399 (407)
95 PLN03227 serine palmitoyltrans 100.0 3.5E-31 7.6E-36 264.6 31.4 314 101-446 1-383 (392)
96 PRK05958 8-amino-7-oxononanoat 100.0 1.6E-30 3.5E-35 260.5 34.3 330 77-443 20-385 (385)
97 TIGR01822 2am3keto_CoA 2-amino 100.0 4.6E-30 9.9E-35 258.0 33.4 335 78-446 18-390 (393)
98 PRK06939 2-amino-3-ketobutyrat 100.0 7.8E-30 1.7E-34 256.6 34.4 333 80-446 24-394 (397)
99 TIGR01825 gly_Cac_T_rel pyrido 100.0 6.8E-30 1.5E-34 256.1 33.6 332 79-446 15-382 (385)
100 PRK13392 5-aminolevulinate syn 100.0 2.8E-29 6.1E-34 253.5 33.7 318 96-446 44-398 (410)
101 KOG1359 Glycine C-acetyltransf 100.0 2.5E-29 5.3E-34 226.4 23.3 327 81-447 49-414 (417)
102 COG0436 Aspartate/tyrosine/aro 100.0 1.1E-28 2.5E-33 245.3 28.6 325 98-446 28-392 (393)
103 TIGR00858 bioF 8-amino-7-oxono 100.0 3.3E-28 7.2E-33 241.4 31.0 321 84-440 3-360 (360)
104 PRK05937 8-amino-7-oxononanoat 100.0 9.2E-28 2E-32 239.0 28.7 315 98-448 4-353 (370)
105 PLN02483 serine palmitoyltrans 100.0 3.8E-27 8.3E-32 241.3 33.3 317 95-446 97-467 (489)
106 COG1168 MalY Bifunctional PLP- 100.0 3E-27 6.6E-32 222.1 28.2 331 89-446 14-387 (388)
107 PRK03317 histidinol-phosphate 100.0 4.1E-27 8.8E-32 234.4 28.3 312 99-445 27-364 (368)
108 PRK06207 aspartate aminotransf 100.0 5E-26 1.1E-30 229.1 30.0 329 97-447 38-404 (405)
109 PRK06225 aspartate aminotransf 100.0 4.3E-26 9.4E-31 228.0 29.3 323 97-448 27-379 (380)
110 PRK07682 hypothetical protein; 99.9 1.5E-25 3.3E-30 224.0 28.4 321 99-447 21-378 (378)
111 PRK07324 transaminase; Validat 99.9 7E-26 1.5E-30 225.7 24.4 325 93-446 21-371 (373)
112 KOG1360 5-aminolevulinate synt 99.9 1.2E-25 2.5E-30 210.4 23.5 314 98-447 171-526 (570)
113 PRK03158 histidinol-phosphate 99.9 2.7E-25 5.9E-30 220.6 27.6 306 98-442 29-358 (359)
114 cd06454 KBL_like KBL_like; thi 99.9 6E-25 1.3E-29 217.2 28.9 310 98-442 1-348 (349)
115 PRK01533 histidinol-phosphate 99.9 3.8E-25 8.2E-30 219.5 26.0 311 96-448 27-358 (366)
116 PRK06108 aspartate aminotransf 99.9 2E-24 4.3E-29 216.3 31.2 320 99-444 25-381 (382)
117 PRK07681 aspartate aminotransf 99.9 8.4E-25 1.8E-29 220.1 28.3 317 97-441 31-384 (399)
118 PRK15481 transcriptional regul 99.9 6.8E-25 1.5E-29 222.9 27.4 337 82-444 59-430 (431)
119 PRK07366 succinyldiaminopimela 99.9 1.3E-24 2.9E-29 217.9 28.0 321 96-442 28-387 (388)
120 PLN00175 aminotransferase fami 99.9 1.7E-24 3.6E-29 218.4 28.7 319 98-444 54-412 (413)
121 PRK08960 hypothetical protein; 99.9 2.7E-24 5.7E-29 215.6 29.5 321 97-444 31-386 (387)
122 PRK09147 succinyldiaminopimela 99.9 3.9E-24 8.6E-29 215.0 29.0 322 96-444 27-395 (396)
123 PRK08153 histidinol-phosphate 99.9 4.4E-24 9.5E-29 212.5 27.9 308 99-447 33-367 (369)
124 PLN00143 tyrosine/nicotianamin 99.9 6.7E-24 1.5E-28 213.9 29.4 331 94-450 28-409 (409)
125 PRK09148 aminotransferase; Val 99.9 7.7E-24 1.7E-28 213.3 29.6 322 96-447 28-392 (405)
126 PLN02187 rooty/superroot1 99.9 6.5E-24 1.4E-28 216.5 29.3 328 96-447 64-440 (462)
127 COG1167 ARO8 Transcriptional r 99.9 7.2E-24 1.6E-28 215.5 29.4 326 96-447 87-457 (459)
128 PLN00145 tyrosine/nicotianamin 99.9 9.4E-24 2E-28 213.8 30.1 329 97-448 51-427 (430)
129 PRK06290 aspartate aminotransf 99.9 4.6E-24 1E-28 214.8 27.5 326 96-447 42-407 (410)
130 PRK00950 histidinol-phosphate 99.9 4.9E-24 1.1E-28 211.8 27.0 308 95-443 31-360 (361)
131 PRK06107 aspartate aminotransf 99.9 8.9E-24 1.9E-28 212.8 29.1 325 97-447 32-402 (402)
132 PRK08068 transaminase; Reviewe 99.9 6E-24 1.3E-28 213.2 27.7 318 97-441 31-385 (389)
133 PRK14809 histidinol-phosphate 99.9 5.4E-24 1.2E-28 211.1 27.0 311 96-444 28-356 (357)
134 PRK06348 aspartate aminotransf 99.9 9.8E-24 2.1E-28 211.2 28.6 318 99-442 30-382 (384)
135 PRK02731 histidinol-phosphate 99.9 1.1E-23 2.4E-28 209.7 28.6 310 96-444 30-365 (367)
136 PRK05764 aspartate aminotransf 99.9 1.3E-23 2.9E-28 211.1 29.0 324 97-446 30-392 (393)
137 PRK13355 bifunctional HTH-doma 99.9 9E-24 1.9E-28 219.0 27.7 328 95-447 143-516 (517)
138 PRK06855 aminotransferase; Val 99.9 1.2E-23 2.7E-28 213.3 27.6 328 97-446 31-430 (433)
139 PRK02610 histidinol-phosphate 99.9 1.4E-23 3.1E-28 209.2 27.3 316 98-446 28-372 (374)
140 PLN02656 tyrosine transaminase 99.9 3.2E-23 7E-28 209.1 29.9 328 96-446 29-404 (409)
141 COG0079 HisC Histidinol-phosph 99.9 2.3E-23 5E-28 203.9 27.5 305 99-445 23-354 (356)
142 TIGR03540 DapC_direct LL-diami 99.9 2.6E-23 5.5E-28 208.3 28.5 317 96-441 27-382 (383)
143 TIGR03576 pyridox_MJ0158 pyrid 99.9 1.7E-23 3.7E-28 205.4 26.2 290 112-443 30-345 (346)
144 PTZ00433 tyrosine aminotransfe 99.9 4.4E-23 9.5E-28 208.4 29.8 332 92-447 27-410 (412)
145 PRK09276 LL-diaminopimelate am 99.9 3.7E-23 8E-28 207.3 28.2 318 97-441 30-384 (385)
146 PRK05957 aspartate aminotransf 99.9 7.3E-23 1.6E-27 205.3 30.3 322 99-447 28-387 (389)
147 PRK08361 aspartate aminotransf 99.9 2.9E-23 6.2E-28 208.4 27.3 323 99-445 34-390 (391)
148 PRK07865 N-succinyldiaminopime 99.9 3.9E-23 8.4E-28 205.6 27.9 306 96-440 25-363 (364)
149 TIGR01264 tyr_amTase_E tyrosin 99.9 2.4E-23 5.2E-28 209.7 26.6 326 97-446 30-400 (401)
150 PRK08056 threonine-phosphate d 99.9 4E-23 8.8E-28 204.7 27.5 312 96-444 18-354 (356)
151 PRK06358 threonine-phosphate d 99.9 7.6E-23 1.6E-27 202.5 29.0 308 98-443 19-353 (354)
152 PRK12414 putative aminotransfe 99.9 4.7E-23 1E-27 206.3 27.7 317 98-441 29-383 (384)
153 PRK05664 threonine-phosphate d 99.9 3.5E-23 7.5E-28 202.9 25.8 297 98-445 20-328 (330)
154 PRK09105 putative aminotransfe 99.9 6.4E-23 1.4E-27 204.0 28.0 304 98-443 43-368 (370)
155 TIGR03538 DapC_gpp succinyldia 99.9 5.7E-23 1.2E-27 206.4 28.0 320 94-442 24-392 (393)
156 PRK08363 alanine aminotransfer 99.9 1.1E-22 2.5E-27 204.6 30.1 326 96-446 28-395 (398)
157 TIGR03539 DapC_actino succinyl 99.9 6.3E-23 1.4E-27 203.4 27.2 305 96-439 19-356 (357)
158 PLN03026 histidinol-phosphate 99.9 5.5E-23 1.2E-27 205.3 26.9 306 96-441 50-378 (380)
159 PRK08636 aspartate aminotransf 99.9 1E-22 2.2E-27 205.2 29.1 326 96-447 31-402 (403)
160 PRK07550 hypothetical protein; 99.9 6.7E-23 1.4E-27 205.5 27.6 322 96-442 27-384 (386)
161 TIGR03537 DapC succinyldiamino 99.9 9.3E-23 2E-27 201.7 28.1 316 99-441 1-349 (350)
162 PRK05942 aspartate aminotransf 99.9 9.8E-23 2.1E-27 204.7 28.6 319 97-442 34-389 (394)
163 PRK08912 hypothetical protein; 99.9 8.4E-23 1.8E-27 204.8 27.7 319 99-445 27-386 (387)
164 TIGR01141 hisC histidinol-phos 99.9 4.1E-23 8.9E-28 204.0 25.1 304 98-440 19-346 (346)
165 PRK05839 hypothetical protein; 99.9 6E-23 1.3E-27 204.7 26.1 318 96-444 22-373 (374)
166 PRK04870 histidinol-phosphate 99.9 6.9E-23 1.5E-27 203.1 26.2 312 97-443 25-356 (356)
167 PRK07683 aminotransferase A; V 99.9 1.7E-22 3.8E-27 202.4 29.0 319 98-445 28-383 (387)
168 PRK07337 aminotransferase; Val 99.9 1.6E-22 3.5E-27 202.8 28.7 321 97-443 29-387 (388)
169 PRK09082 methionine aminotrans 99.9 2.5E-22 5.3E-27 201.3 29.7 316 98-441 30-385 (386)
170 PRK07777 aminotransferase; Val 99.9 1.5E-22 3.2E-27 203.0 28.1 318 99-443 25-384 (387)
171 PRK14807 histidinol-phosphate 99.9 1.5E-22 3.2E-27 200.3 27.6 308 100-443 24-350 (351)
172 PRK05387 histidinol-phosphate 99.9 9.5E-23 2.1E-27 201.9 26.0 308 97-444 23-352 (353)
173 PRK08175 aminotransferase; Val 99.9 3.8E-22 8.2E-27 200.5 30.2 321 97-446 28-390 (395)
174 PRK07309 aromatic amino acid a 99.9 2.2E-22 4.9E-27 201.9 28.2 325 98-447 30-390 (391)
175 PLN02721 threonine aldolase 99.9 1.2E-22 2.7E-27 201.0 26.0 319 99-445 6-352 (353)
176 PRK06959 putative threonine-ph 99.9 1.4E-22 3E-27 199.2 25.6 295 98-448 24-336 (339)
177 KOG0257 Kynurenine aminotransf 99.9 2.7E-23 5.9E-28 197.5 18.9 308 116-440 46-414 (420)
178 PRK03321 putative aminotransfe 99.9 1E-22 2.2E-27 201.6 24.0 308 99-444 23-350 (352)
179 PRK07568 aspartate aminotransf 99.9 1.2E-21 2.6E-26 197.2 32.0 325 97-447 29-394 (397)
180 KOG0259 Tyrosine aminotransfer 99.9 1.3E-21 2.9E-26 182.8 28.1 325 98-447 61-435 (447)
181 PTZ00377 alanine aminotransfer 99.9 4E-22 8.6E-27 205.1 26.9 311 116-447 90-477 (481)
182 PRK05166 histidinol-phosphate 99.9 5E-22 1.1E-26 198.0 26.5 309 97-443 35-369 (371)
183 PRK08354 putative aminotransfe 99.9 9.1E-22 2E-26 191.3 27.6 293 96-442 6-309 (311)
184 PLN02672 methionine S-methyltr 99.9 5.1E-22 1.1E-26 214.1 28.3 325 91-444 690-1079(1082)
185 PF00155 Aminotran_1_2: Aminot 99.9 2.3E-22 4.9E-27 200.0 23.8 311 99-439 2-363 (363)
186 TIGR01265 tyr_nico_aTase tyros 99.9 1.5E-21 3.3E-26 196.6 30.1 325 96-445 29-401 (403)
187 PRK07590 L,L-diaminopimelate a 99.9 5.5E-22 1.2E-26 200.2 25.9 325 97-443 33-409 (409)
188 PRK09265 aminotransferase AlaT 99.9 1.5E-21 3.3E-26 196.8 28.5 329 96-447 31-403 (404)
189 PRK09440 avtA valine--pyruvate 99.9 8.7E-22 1.9E-26 199.4 26.3 333 99-449 31-415 (416)
190 cd00613 GDC-P Glycine cleavage 99.9 1.2E-21 2.6E-26 197.3 26.8 307 105-439 23-398 (398)
191 TIGR01140 L_thr_O3P_dcar L-thr 99.9 1E-21 2.2E-26 192.7 25.2 256 142-439 49-329 (330)
192 PRK06836 aspartate aminotransf 99.9 3.6E-21 7.8E-26 193.3 29.5 324 98-447 33-393 (394)
193 PRK14808 histidinol-phosphate 99.9 1.2E-21 2.7E-26 192.2 24.5 305 86-441 7-333 (335)
194 PRK07392 threonine-phosphate d 99.9 2.8E-21 6.1E-26 191.9 26.6 307 98-442 22-356 (360)
195 PRK06425 histidinol-phosphate 99.9 1.8E-21 4E-26 190.9 24.1 272 137-443 37-331 (332)
196 PRK01688 histidinol-phosphate 99.9 9.6E-22 2.1E-26 194.4 22.2 296 99-439 29-350 (351)
197 cd00609 AAT_like Aspartate ami 99.9 3E-21 6.4E-26 190.4 24.6 278 142-440 42-349 (350)
198 TIGR02539 SepCysS Sep-tRNA:Cys 99.9 7.6E-21 1.6E-25 189.4 26.6 292 119-445 20-368 (370)
199 TIGR03392 FeS_syn_CsdA cystein 99.9 2E-20 4.2E-25 188.4 29.8 318 97-446 16-396 (398)
200 PRK03967 histidinol-phosphate 99.9 6.2E-21 1.3E-25 187.6 25.1 302 96-445 16-334 (337)
201 TIGR03542 DAPAT_plant LL-diami 99.9 4.5E-21 9.7E-26 193.2 24.5 325 97-443 32-402 (402)
202 PLN02231 alanine transaminase 99.9 3.8E-21 8.2E-26 198.5 24.0 311 116-447 142-529 (534)
203 PRK09275 aspartate aminotransf 99.9 2.4E-21 5.2E-26 197.5 21.9 326 100-448 102-520 (527)
204 PLN02450 1-aminocyclopropane-1 99.9 7.8E-21 1.7E-25 194.2 25.6 285 141-447 91-432 (468)
205 cd06502 TA_like Low-specificit 99.9 6.1E-21 1.3E-25 187.8 23.3 306 102-441 1-337 (338)
206 PTZ00376 aspartate aminotransf 99.9 1.2E-20 2.5E-25 190.3 25.7 280 141-444 77-402 (404)
207 PLN02607 1-aminocyclopropane-1 99.9 1.2E-20 2.6E-25 191.5 25.7 281 141-447 100-439 (447)
208 PRK13520 L-tyrosine decarboxyl 99.9 2.7E-20 5.8E-25 185.6 27.4 300 114-444 31-370 (371)
209 PRK10534 L-threonine aldolase; 99.9 5.5E-21 1.2E-25 187.8 21.9 307 100-444 1-332 (333)
210 PLN02376 1-aminocyclopropane-1 99.9 2.6E-20 5.6E-25 191.1 26.7 281 141-447 99-440 (496)
211 TIGR03801 asp_4_decarbox aspar 99.9 1.2E-20 2.5E-25 192.2 23.1 329 100-448 96-519 (521)
212 PRK10874 cysteine sulfinate de 99.9 1.2E-19 2.7E-24 182.8 30.4 319 97-446 19-399 (401)
213 PRK04781 histidinol-phosphate 99.9 1.7E-20 3.8E-25 186.3 23.5 276 142-443 61-361 (364)
214 PRK09257 aromatic amino acid a 99.9 2.1E-20 4.6E-25 187.9 23.5 319 99-443 27-396 (396)
215 cd06453 SufS_like Cysteine des 99.9 1.9E-19 4.1E-24 179.7 28.4 297 112-439 8-373 (373)
216 PRK08637 hypothetical protein; 99.9 5.9E-20 1.3E-24 184.2 24.8 282 142-447 50-388 (388)
217 PRK07908 hypothetical protein; 99.9 1.9E-19 4.1E-24 178.0 26.8 300 97-444 21-346 (349)
218 PRK04635 histidinol-phosphate 99.9 4.5E-20 9.7E-25 182.8 22.1 267 142-441 62-351 (354)
219 PRK09331 Sep-tRNA:Cys-tRNA syn 99.9 5.6E-19 1.2E-23 176.9 29.5 307 109-447 26-383 (387)
220 TIGR03402 FeS_nifS cysteine de 99.8 5.7E-19 1.2E-23 176.6 28.1 315 100-448 2-375 (379)
221 PRK09295 bifunctional cysteine 99.8 2.1E-18 4.6E-23 174.0 30.7 314 97-444 23-403 (406)
222 TIGR01976 am_tr_V_VC1184 cyste 99.8 1.3E-18 2.9E-23 175.1 28.8 310 98-439 18-397 (397)
223 cd06451 AGAT_like Alanine-glyo 99.8 4.3E-19 9.4E-24 176.0 24.7 300 115-444 10-356 (356)
224 TIGR03301 PhnW-AepZ 2-aminoeth 99.8 7.7E-19 1.7E-23 173.9 24.7 299 115-443 10-355 (355)
225 TIGR01979 sufS cysteine desulf 99.8 4.4E-18 9.6E-23 171.6 30.3 316 99-446 20-402 (403)
226 cd06452 SepCysS Sep-tRNA:Cys-t 99.8 1.7E-18 3.8E-23 171.9 26.0 306 113-443 11-360 (361)
227 PRK13238 tnaA tryptophanase/L- 99.8 9.4E-18 2E-22 170.4 30.4 308 118-445 58-433 (460)
228 PRK13034 serine hydroxymethylt 99.8 5.8E-18 1.3E-22 170.7 28.4 306 115-445 40-392 (416)
229 KOG1358 Serine palmitoyltransf 99.8 1.2E-18 2.5E-23 163.7 21.3 328 83-445 80-465 (467)
230 TIGR03812 tyr_de_CO2_Arch tyro 99.8 1E-17 2.2E-22 167.2 29.2 302 115-441 32-372 (373)
231 cd00614 CGS_like CGS_like: Cys 99.8 1E-18 2.2E-23 173.8 21.6 197 134-361 34-235 (369)
232 PLN02368 alanine transaminase 99.8 4.3E-19 9.3E-24 177.9 18.9 202 140-360 111-340 (407)
233 KOG1357 Serine palmitoyltransf 99.8 2.4E-19 5.2E-24 171.1 15.5 277 137-444 179-501 (519)
234 PLN02397 aspartate transaminas 99.8 4E-18 8.7E-23 172.5 25.5 239 189-444 141-420 (423)
235 COG1104 NifS Cysteine sulfinat 99.8 8.6E-18 1.9E-22 161.7 26.2 323 99-449 3-381 (386)
236 PLN02855 Bifunctional selenocy 99.8 1.4E-17 3.1E-22 169.0 29.1 319 97-447 32-420 (424)
237 PRK02948 cysteine desulfurase; 99.8 1.5E-17 3.2E-22 166.5 27.6 316 99-447 2-376 (381)
238 TIGR01977 am_tr_V_EF2568 cyste 99.8 1.5E-17 3.3E-22 166.1 27.2 299 115-441 12-375 (376)
239 PLN02242 methionine gamma-lyas 99.8 6.6E-18 1.4E-22 169.8 23.6 179 133-339 69-249 (418)
240 TIGR02326 transamin_PhnW 2-ami 99.8 1.2E-17 2.6E-22 166.1 25.3 270 142-444 37-361 (363)
241 TIGR01437 selA_rel uncharacter 99.8 9.5E-17 2.1E-21 159.1 29.8 315 98-442 8-362 (363)
242 COG0520 csdA Selenocysteine ly 99.8 1.3E-16 2.9E-21 158.8 30.2 314 98-444 23-404 (405)
243 KOG1368 Threonine aldolase [Am 99.8 6.6E-18 1.4E-22 153.3 18.8 315 99-443 22-366 (384)
244 COG2008 GLY1 Threonine aldolas 99.8 1.7E-17 3.7E-22 156.3 20.7 309 101-443 2-341 (342)
245 PRK08249 cystathionine gamma-s 99.8 1.7E-17 3.7E-22 165.9 21.9 281 133-448 57-396 (398)
246 PRK08247 cystathionine gamma-s 99.8 2E-17 4.2E-22 164.3 22.1 277 133-446 45-365 (366)
247 TIGR03403 nifS_epsilon cystein 99.8 1.2E-16 2.6E-21 160.0 27.8 313 100-448 2-378 (382)
248 TIGR02006 IscS cysteine desulf 99.8 2.2E-16 4.8E-21 159.1 29.4 314 98-447 4-379 (402)
249 cd00617 Tnase_like Tryptophana 99.8 8.7E-17 1.9E-21 161.2 25.3 322 95-447 17-410 (431)
250 cd00378 SHMT Serine-glycine hy 99.8 8.3E-17 1.8E-21 162.3 25.1 316 98-445 19-385 (402)
251 TIGR01814 kynureninase kynuren 99.8 1.3E-16 2.8E-21 161.0 26.4 311 97-443 27-405 (406)
252 PRK13479 2-aminoethylphosphona 99.8 1.1E-16 2.4E-21 159.4 24.3 301 115-446 16-364 (368)
253 PRK00011 glyA serine hydroxyme 99.8 3.9E-16 8.6E-21 158.1 28.2 317 98-445 25-389 (416)
254 PRK08133 O-succinylhomoserine 99.8 1.1E-16 2.3E-21 160.1 23.5 196 134-360 55-254 (390)
255 TIGR01324 cysta_beta_ly_B cyst 99.8 6.2E-17 1.3E-21 160.7 21.3 277 134-445 44-376 (377)
256 TIGR01325 O_suc_HS_sulf O-succ 99.8 1.2E-16 2.6E-21 159.4 23.0 198 134-362 48-249 (380)
257 PRK06767 methionine gamma-lyas 99.8 4.3E-17 9.4E-22 162.9 19.7 277 134-445 55-385 (386)
258 PRK07049 methionine gamma-lyas 99.8 1.2E-16 2.6E-21 161.2 22.7 202 134-362 77-290 (427)
259 TIGR01328 met_gam_lyase methio 99.8 2E-16 4.4E-21 158.1 24.0 199 132-361 51-255 (391)
260 PRK08045 cystathionine gamma-s 99.8 2.8E-16 6.1E-21 156.6 24.6 230 133-393 45-305 (386)
261 PRK06234 methionine gamma-lyas 99.8 1.4E-16 3E-21 159.8 22.6 197 134-361 58-262 (400)
262 PRK08776 cystathionine gamma-s 99.8 3.6E-16 7.8E-21 156.7 25.5 198 134-362 54-256 (405)
263 PRK07810 O-succinylhomoserine 99.8 1.4E-16 3.1E-21 159.6 22.5 229 134-393 64-323 (403)
264 PRK08861 cystathionine gamma-s 99.7 2.4E-16 5.2E-21 156.7 23.7 282 132-448 45-386 (388)
265 PRK07504 O-succinylhomoserine 99.7 1.7E-16 3.7E-21 159.0 22.8 279 134-447 59-397 (398)
266 cd06450 DOPA_deC_like DOPA dec 99.7 1.7E-16 3.7E-21 156.6 22.6 267 140-441 38-344 (345)
267 PF00266 Aminotran_5: Aminotra 99.7 5.3E-16 1.1E-20 154.7 25.8 296 112-435 8-371 (371)
268 TIGR02080 O_succ_thio_ly O-suc 99.7 3.1E-16 6.7E-21 156.2 23.3 198 134-362 45-247 (382)
269 KOG0634 Aromatic amino acid am 99.7 4.6E-16 1E-20 148.4 23.1 266 157-447 126-468 (472)
270 PRK09028 cystathionine beta-ly 99.7 4.3E-16 9.4E-21 154.8 24.1 279 134-447 55-389 (394)
271 PRK06460 hypothetical protein; 99.7 4.7E-16 1E-20 154.8 24.4 278 134-446 39-375 (376)
272 PLN02409 serine--glyoxylate am 99.7 6.5E-16 1.4E-20 155.5 25.7 303 115-447 20-374 (401)
273 cd00616 AHBA_syn 3-amino-5-hyd 99.7 6.4E-16 1.4E-20 152.9 24.9 284 121-440 3-352 (352)
274 PRK07269 cystathionine gamma-s 99.7 2.8E-16 6.1E-21 155.3 20.5 274 133-444 47-363 (364)
275 TIGR01326 OAH_OAS_sulfhy OAH/O 99.7 4.1E-16 8.9E-21 157.4 22.0 166 134-330 51-219 (418)
276 KOG0256 1-aminocyclopropane-1- 99.7 1.2E-15 2.5E-20 144.6 22.6 258 155-446 146-462 (471)
277 PRK14012 cysteine desulfurase; 99.7 3.4E-15 7.3E-20 150.6 27.6 316 98-447 4-381 (404)
278 PRK07050 cystathionine beta-ly 99.7 5.4E-16 1.2E-20 155.1 21.5 194 132-356 57-255 (394)
279 PRK08574 cystathionine gamma-s 99.7 5E-16 1.1E-20 154.8 21.2 197 134-362 47-248 (385)
280 PRK07503 methionine gamma-lyas 99.7 1.2E-15 2.5E-20 153.3 23.9 198 134-362 59-262 (403)
281 PLN02651 cysteine desulfurase 99.7 7.8E-16 1.7E-20 153.1 22.2 291 113-433 9-364 (364)
282 PRK05968 hypothetical protein; 99.7 5.2E-16 1.1E-20 155.1 20.4 276 134-446 57-387 (389)
283 PRK06084 O-acetylhomoserine am 99.7 1E-15 2.2E-20 154.2 22.7 164 134-328 52-218 (425)
284 PRK07582 cystathionine gamma-l 99.7 1.7E-15 3.6E-20 150.3 22.9 270 134-444 45-364 (366)
285 PRK07811 cystathionine gamma-s 99.7 2.5E-15 5.4E-20 150.2 24.2 196 134-360 55-255 (388)
286 PRK00451 glycine dehydrogenase 99.7 6.4E-15 1.4E-19 150.6 27.3 268 143-443 115-446 (447)
287 PLN02509 cystathionine beta-ly 99.7 1.5E-15 3.2E-20 153.6 20.4 197 134-362 127-328 (464)
288 PRK05967 cystathionine beta-ly 99.7 5.4E-15 1.2E-19 146.7 23.7 197 133-360 57-257 (395)
289 TIGR02379 ECA_wecE TDP-4-keto- 99.7 1.4E-14 3.1E-19 144.1 26.3 293 117-443 11-375 (376)
290 TIGR01329 cysta_beta_ly_E cyst 99.7 3.5E-15 7.7E-20 148.6 21.1 276 134-445 41-375 (378)
291 PF01053 Cys_Met_Meta_PP: Cys/ 99.7 5.1E-15 1.1E-19 146.4 21.6 278 132-444 47-386 (386)
292 PRK08064 cystathionine beta-ly 99.7 1.1E-14 2.4E-19 145.6 23.5 190 135-356 49-243 (390)
293 PRK06176 cystathionine gamma-s 99.7 2.3E-15 5E-20 149.9 18.4 172 134-337 44-220 (380)
294 PLN03226 serine hydroxymethylt 99.7 3.5E-14 7.6E-19 144.7 26.9 303 114-445 45-419 (475)
295 PRK08114 cystathionine beta-ly 99.7 9.3E-15 2E-19 144.9 22.0 280 132-446 54-394 (395)
296 PRK04366 glycine dehydrogenase 99.7 6.2E-14 1.4E-18 143.9 27.5 316 114-451 81-454 (481)
297 PRK05994 O-acetylhomoserine am 99.7 2.2E-14 4.8E-19 144.9 23.1 162 135-327 58-222 (427)
298 PRK05939 hypothetical protein; 99.6 3.2E-14 7E-19 142.3 23.9 166 132-329 39-207 (397)
299 PRK08248 O-acetylhomoserine am 99.6 2.2E-14 4.8E-19 144.8 22.7 164 134-328 58-224 (431)
300 COG3977 Alanine-alpha-ketoisov 99.6 8.6E-14 1.9E-18 126.9 23.9 288 140-449 78-415 (417)
301 PRK06702 O-acetylhomoserine am 99.6 2.2E-14 4.8E-19 143.8 22.3 173 115-319 37-212 (432)
302 PTZ00094 serine hydroxymethylt 99.6 6E-14 1.3E-18 143.2 25.6 318 99-445 35-408 (452)
303 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.6 1E-13 2.2E-18 138.4 26.6 293 117-443 11-374 (375)
304 PRK11658 UDP-4-amino-4-deoxy-L 99.6 9.5E-14 2.1E-18 138.6 25.3 291 117-443 14-377 (379)
305 PRK07812 O-acetylhomoserine am 99.6 6.8E-14 1.5E-18 141.0 23.9 163 135-328 64-231 (436)
306 PRK08134 O-acetylhomoserine am 99.6 9.1E-14 2E-18 140.3 23.8 161 134-325 58-221 (433)
307 COG2873 MET17 O-acetylhomoseri 99.6 6.8E-15 1.5E-19 138.2 14.3 186 112-329 35-223 (426)
308 PRK07671 cystathionine beta-ly 99.6 8.2E-14 1.8E-18 138.7 22.6 194 134-359 44-242 (377)
309 TIGR03588 PseC UDP-4-keto-6-de 99.6 3.4E-13 7.4E-18 134.9 26.8 294 117-443 10-380 (380)
310 PRK13580 serine hydroxymethylt 99.6 2.1E-13 4.6E-18 136.9 23.3 204 234-446 208-446 (493)
311 COG0075 Serine-pyruvate aminot 99.6 2.4E-13 5.3E-18 132.0 22.0 301 115-447 16-365 (383)
312 TIGR03235 DNA_S_dndA cysteine 99.6 5.5E-13 1.2E-17 132.1 23.3 274 112-413 7-321 (353)
313 COG0626 MetC Cystathionine bet 99.6 2.8E-13 6.1E-18 132.6 20.5 280 133-446 56-395 (396)
314 PRK15407 lipopolysaccharide bi 99.6 1.3E-12 2.9E-17 132.2 26.2 278 141-444 64-435 (438)
315 PLN02414 glycine dehydrogenase 99.6 1.2E-12 2.7E-17 141.7 27.1 279 142-448 570-910 (993)
316 cd01494 AAT_I Aspartate aminot 99.5 1.2E-13 2.5E-18 121.4 14.3 165 142-329 2-170 (170)
317 KOG0633 Histidinol phosphate a 99.5 2E-13 4.3E-18 122.1 14.7 272 143-442 72-374 (375)
318 KOG1549 Cysteine desulfurase N 99.5 6.9E-13 1.5E-17 128.5 19.3 199 98-330 44-257 (428)
319 TIGR01788 Glu-decarb-GAD gluta 99.5 1.1E-11 2.3E-16 124.9 27.3 316 115-446 53-430 (431)
320 PRK04311 selenocysteine syntha 99.5 1.2E-11 2.6E-16 125.3 26.8 297 115-444 98-463 (464)
321 PLN03032 serine decarboxylase; 99.5 1.3E-11 2.8E-16 121.8 26.3 267 142-441 68-372 (374)
322 TIGR00461 gcvP glycine dehydro 99.5 2.5E-11 5.5E-16 130.1 29.6 281 142-448 532-870 (939)
323 PRK05613 O-acetylhomoserine am 99.5 3E-12 6.5E-17 129.2 21.2 164 134-328 63-231 (437)
324 PRK06434 cystathionine gamma-l 99.5 4.8E-12 1E-16 125.6 22.0 227 133-393 57-308 (384)
325 PRK02769 histidine decarboxyla 99.5 2.9E-11 6.4E-16 120.0 27.5 272 141-445 66-372 (380)
326 PRK12566 glycine dehydrogenase 99.5 1.3E-11 2.9E-16 131.5 26.2 279 142-447 545-878 (954)
327 KOG0053 Cystathionine beta-lya 99.5 2.5E-12 5.4E-17 124.4 18.1 196 134-360 71-271 (409)
328 TIGR00474 selA seryl-tRNA(sec) 99.5 2.8E-11 6.1E-16 122.3 26.4 194 115-338 93-310 (454)
329 PRK03080 phosphoserine aminotr 99.5 5.7E-12 1.2E-16 125.9 21.0 291 115-448 23-376 (378)
330 PF01041 DegT_DnrJ_EryC1: DegT 99.5 8.6E-12 1.9E-16 123.9 22.2 290 118-440 6-363 (363)
331 PRK05367 glycine dehydrogenase 99.5 2.7E-11 5.8E-16 132.0 27.4 286 142-448 544-878 (954)
332 COG0399 WecE Predicted pyridox 99.4 3.5E-11 7.5E-16 117.3 22.9 294 117-445 15-373 (374)
333 TIGR03531 selenium_SpcS O-phos 99.4 1.8E-11 3.9E-16 122.9 19.5 280 142-443 107-444 (444)
334 TIGR02618 tyr_phenol_ly tyrosi 99.4 2.6E-10 5.5E-15 113.2 26.0 322 97-446 37-427 (450)
335 COG1003 GcvP Glycine cleavage 99.4 3.8E-10 8.1E-15 108.5 25.5 283 142-450 111-452 (496)
336 PRK13237 tyrosine phenol-lyase 99.4 4.6E-10 1E-14 111.7 26.8 320 97-446 44-434 (460)
337 PLN02880 tyrosine decarboxylas 99.3 1.5E-10 3.3E-15 118.7 22.7 302 139-449 121-488 (490)
338 TIGR01366 serC_3 phosphoserine 99.3 5.6E-11 1.2E-15 117.8 18.8 294 115-446 14-361 (361)
339 PF01212 Beta_elim_lyase: Beta 99.3 6.6E-12 1.4E-16 119.8 11.0 198 115-335 7-214 (290)
340 TIGR01364 serC_1 phosphoserine 99.3 4.3E-10 9.3E-15 110.8 24.0 295 115-444 3-347 (349)
341 cd00615 Orn_deC_like Ornithine 99.3 1.1E-11 2.4E-16 119.6 12.5 203 138-362 57-270 (294)
342 KOG2862 Alanine-glyoxylate ami 99.3 1.6E-09 3.5E-14 99.8 24.4 263 155-445 68-382 (385)
343 PLN02724 Molybdenum cofactor s 99.3 1.4E-09 3E-14 118.5 27.5 320 98-444 35-487 (805)
344 COG1103 Archaea-specific pyrid 99.3 5.2E-10 1.1E-14 101.1 19.7 276 140-445 61-380 (382)
345 PLN02590 probable tyrosine dec 99.3 3.2E-09 7E-14 109.3 28.1 294 139-447 169-534 (539)
346 PLN02263 serine decarboxylase 99.3 4.4E-09 9.5E-14 105.7 27.3 272 142-445 135-443 (470)
347 PRK05355 3-phosphoserine/phosp 99.3 6.4E-10 1.4E-14 110.1 20.5 294 115-444 14-357 (360)
348 PF12897 Aminotran_MocR: Alani 99.2 2.5E-09 5.4E-14 102.1 20.7 289 140-444 69-414 (425)
349 cd00611 PSAT_like Phosphoserin 99.2 1.9E-09 4E-14 106.9 20.7 290 115-442 10-353 (355)
350 TIGR03799 NOD_PanD_pyr putativ 99.2 5.1E-09 1.1E-13 107.9 23.1 186 139-337 128-356 (522)
351 TIGR02617 tnaA_trp_ase tryptop 99.2 1.5E-08 3.3E-13 99.9 24.7 323 98-446 41-442 (467)
352 KOG0258 Alanine aminotransfera 99.1 3.7E-08 8.1E-13 93.5 22.8 168 142-327 119-310 (475)
353 PLN02271 serine hydroxymethylt 99.0 1.1E-07 2.3E-12 96.7 24.3 260 158-444 218-539 (586)
354 COG0112 GlyA Glycine/serine hy 99.0 2E-07 4.3E-12 89.3 22.5 306 114-445 37-390 (413)
355 COG3844 Kynureninase [Amino ac 99.0 3.4E-07 7.4E-12 85.3 22.7 318 94-447 28-404 (407)
356 COG1448 TyrB Aspartate/tyrosin 98.9 1.2E-07 2.7E-12 90.5 20.1 256 158-442 97-395 (396)
357 COG0076 GadB Glutamate decarbo 98.9 3.7E-07 7.9E-12 92.6 21.6 205 115-331 74-292 (460)
358 PF00464 SHMT: Serine hydroxym 98.8 1.3E-07 2.9E-12 93.3 16.8 266 148-438 74-398 (399)
359 PLN02414 glycine dehydrogenase 98.8 3.7E-06 8E-11 92.1 26.6 294 112-440 113-464 (993)
360 PLN02452 phosphoserine transam 98.7 1.9E-06 4.2E-11 85.2 21.8 297 115-445 18-363 (365)
361 PRK15029 arginine decarboxylas 98.7 1.8E-06 3.9E-11 91.9 22.7 159 142-319 207-390 (755)
362 COG1921 SelA Selenocysteine sy 98.7 7.4E-07 1.6E-11 86.5 17.0 227 111-365 33-272 (395)
363 PRK05367 glycine dehydrogenase 98.6 1E-05 2.2E-10 89.0 25.6 264 142-440 123-437 (954)
364 PRK13578 ornithine decarboxyla 98.6 5.5E-06 1.2E-10 87.5 21.8 160 140-319 174-359 (720)
365 TIGR01365 serC_2 phosphoserine 98.6 2.5E-06 5.5E-11 84.4 18.3 286 116-444 15-372 (374)
366 PF00282 Pyridoxal_deC: Pyrido 98.6 4.8E-07 1E-11 89.9 12.3 172 142-330 81-277 (373)
367 KOG2040 Glycine dehydrogenase 98.6 7E-06 1.5E-10 82.9 19.6 287 141-447 583-920 (1001)
368 PF03841 SelA: L-seryl-tRNA se 98.6 7E-08 1.5E-12 92.7 5.5 229 110-364 11-261 (367)
369 PF06838 Met_gamma_lyase: Meth 98.5 9E-06 1.9E-10 77.6 17.7 203 115-336 25-245 (403)
370 COG3033 TnaA Tryptophanase [Am 98.5 9.3E-05 2E-09 70.2 23.5 330 96-446 44-445 (471)
371 PRK12462 phosphoserine aminotr 98.4 0.0001 2.2E-09 72.5 22.8 295 115-444 15-361 (364)
372 PF01276 OKR_DC_1: Orn/Lys/Arg 98.4 6.3E-07 1.4E-11 89.0 6.9 160 139-319 65-244 (417)
373 PRK15399 lysine decarboxylase 98.3 0.00013 2.9E-09 77.1 23.0 276 141-444 196-558 (713)
374 PRK15400 lysine decarboxylase 98.3 0.00014 3E-09 77.0 23.1 278 140-444 195-558 (714)
375 COG0403 GcvP Glycine cleavage 98.3 0.00027 5.9E-09 68.8 22.8 269 144-442 124-447 (450)
376 TIGR00461 gcvP glycine dehydro 98.2 0.00073 1.6E-08 73.7 25.3 264 142-440 111-426 (939)
377 PF02347 GDC-P: Glycine cleava 98.1 0.00037 8E-09 69.5 19.3 164 142-336 112-283 (429)
378 TIGR03811 tyr_de_CO2_Ent tyros 97.8 0.00018 3.9E-09 75.4 12.3 40 139-178 122-163 (608)
379 KOG1383 Glutamate decarboxylas 97.8 0.0049 1.1E-07 60.8 20.5 318 116-450 93-451 (491)
380 COG1982 LdcC Arginine/lysine/o 97.8 0.0024 5.2E-08 65.3 19.0 158 141-319 71-236 (557)
381 KOG3846 L-kynurenine hydrolase 97.7 0.0089 1.9E-07 55.9 20.5 314 111-448 75-464 (465)
382 KOG1412 Aspartate aminotransfe 97.7 0.0018 4E-08 60.5 15.7 261 161-449 105-409 (410)
383 COG1932 SerC Phosphoserine ami 97.7 0.0066 1.4E-07 58.4 19.1 181 246-445 144-363 (365)
384 PF05889 SLA_LP_auto_ag: Solub 97.6 0.0046 9.9E-08 60.5 17.0 205 234-444 140-389 (389)
385 PRK12566 glycine dehydrogenase 97.6 0.04 8.7E-07 60.2 25.2 263 142-440 126-439 (954)
386 COG4100 Cystathionine beta-lya 97.3 0.0093 2E-07 55.7 14.1 201 115-336 36-256 (416)
387 PF04864 Alliinase_C: Allinase 97.2 0.00065 1.4E-08 64.7 6.3 265 142-442 45-362 (363)
388 KOG1411 Aspartate aminotransfe 97.0 0.034 7.3E-07 53.0 15.1 227 79-336 50-298 (427)
389 KOG0629 Glutamate decarboxylas 96.9 0.01 2.2E-07 57.9 11.2 178 142-335 143-342 (510)
390 PLN02994 1-aminocyclopropane-1 96.8 0.0056 1.2E-07 52.7 8.0 55 137-202 93-153 (153)
391 KOG2467 Glycine/serine hydroxy 96.5 0.11 2.5E-06 50.0 14.4 281 115-443 52-379 (477)
392 KOG0628 Aromatic-L-amino-acid/ 93.0 0.65 1.4E-05 46.3 9.3 55 234-291 218-276 (511)
393 PRK05782 bifunctional sirohydr 85.1 19 0.00041 35.2 12.6 50 305-361 279-332 (335)
394 smart00642 Aamy Alpha-amylase 69.4 12 0.00025 32.6 5.6 58 234-291 17-94 (166)
395 KOG2040 Glycine dehydrogenase 65.6 1.9E+02 0.0042 30.9 18.5 46 394-440 433-478 (1001)
396 PF13481 AAA_25: AAA domain; P 64.2 14 0.00029 32.7 5.1 52 234-285 128-184 (193)
397 COG2515 Acd 1-aminocyclopropan 62.2 1.5E+02 0.0033 28.5 12.7 46 248-296 244-289 (323)
398 COG1105 FruK Fructose-1-phosph 61.9 22 0.00048 34.2 6.3 37 248-288 131-167 (310)
399 KOG2433 Uncharacterized conser 61.4 24 0.00052 34.7 6.3 93 115-209 434-546 (577)
400 COG0352 ThiE Thiamine monophos 55.3 23 0.0005 32.2 4.9 88 235-331 24-115 (211)
401 KOG3843 Predicted serine hydro 52.8 42 0.00091 31.3 6.1 56 234-292 142-198 (432)
402 cd01121 Sms Sms (bacterial rad 51.5 25 0.00055 35.0 5.0 59 227-285 139-205 (372)
403 COG0108 RibB 3,4-dihydroxy-2-b 51.3 21 0.00047 31.8 3.9 37 244-285 154-190 (203)
404 PRK06264 cbiC precorrin-8X met 50.3 2E+02 0.0043 26.1 10.0 50 306-362 152-205 (210)
405 cd01393 recA_like RecA is a b 47.5 1.4E+02 0.0031 26.8 9.1 60 226-285 87-164 (226)
406 PLN02672 methionine S-methyltr 47.3 1.4E+02 0.003 34.2 10.3 114 155-288 449-565 (1082)
407 PRK08285 cobH precorrin-8X met 45.2 1.8E+02 0.0038 26.4 8.8 48 306-360 152-205 (208)
408 PRK05953 precorrin-8X methylmu 42.4 2.6E+02 0.0057 25.3 9.7 47 306-359 144-194 (208)
409 PRK08025 lipid A biosynthesis 40.8 1.1E+02 0.0023 29.5 7.4 21 190-210 123-143 (305)
410 PF06153 DUF970: Protein of un 38.0 48 0.001 26.6 3.7 55 388-445 5-66 (109)
411 cd00984 DnaB_C DnaB helicase C 37.7 67 0.0015 29.4 5.4 52 234-285 107-168 (242)
412 cd01020 TroA_b Metal binding p 37.6 92 0.002 29.2 6.3 43 234-284 194-236 (264)
413 PRK13601 putative L7Ae-like ri 36.5 59 0.0013 24.6 3.8 49 236-292 14-62 (82)
414 COG1435 Tdk Thymidine kinase [ 35.8 3E+02 0.0064 24.8 8.6 40 247-292 83-122 (201)
415 TIGR02237 recomb_radB DNA repa 35.8 2.2E+02 0.0049 25.2 8.4 53 238-290 89-151 (209)
416 PRK11823 DNA repair protein Ra 35.7 70 0.0015 32.8 5.5 57 229-285 139-203 (446)
417 PRK05954 precorrin-8X methylmu 35.3 3.4E+02 0.0073 24.5 10.1 48 306-360 146-197 (203)
418 PRK13602 putative ribosomal pr 34.9 1.2E+02 0.0026 22.8 5.4 49 236-292 17-65 (82)
419 TIGR00416 sms DNA repair prote 34.7 67 0.0015 33.0 5.2 57 228-284 152-216 (454)
420 cd01123 Rad51_DMC1_radA Rad51_ 34.7 51 0.0011 30.0 4.0 52 238-289 106-170 (235)
421 COG1066 Sms Predicted ATP-depe 34.7 82 0.0018 31.7 5.4 57 228-284 150-214 (456)
422 TIGR01305 GMP_reduct_1 guanosi 34.5 3.3E+02 0.0071 26.7 9.4 117 190-319 121-246 (343)
423 cd01422 MGS Methylglyoxal synt 34.3 97 0.0021 25.0 5.1 45 237-285 61-106 (115)
424 PF07505 Gp37_Gp68: Phage prot 34.2 1.1E+02 0.0024 28.8 6.1 39 247-286 189-227 (261)
425 PF00926 DHBP_synthase: 3,4-di 33.7 65 0.0014 28.8 4.3 37 244-285 150-186 (194)
426 PRK10785 maltodextrin glucosid 33.1 85 0.0018 33.5 5.8 57 234-290 177-249 (598)
427 PF12138 Spherulin4: Spherulat 32.9 98 0.0021 29.0 5.6 50 235-284 18-71 (253)
428 TIGR00789 flhB_rel flhB C-term 32.8 34 0.00075 25.9 2.0 23 268-290 28-50 (82)
429 COG2159 Predicted metal-depend 32.7 95 0.0021 29.8 5.6 53 235-293 115-167 (293)
430 cd01169 HMPP_kinase 4-amino-5- 32.4 74 0.0016 29.1 4.7 44 238-289 60-104 (242)
431 TIGR00506 ribB 3,4-dihydroxy-2 31.9 74 0.0016 28.6 4.3 36 245-285 156-191 (199)
432 TIGR03573 WbuX N-acetyl sugar 30.6 5.3E+02 0.011 25.3 10.6 22 265-286 145-166 (343)
433 PF10087 DUF2325: Uncharacteri 30.6 89 0.0019 24.2 4.2 42 236-286 40-81 (97)
434 PRK06683 hypothetical protein; 30.3 88 0.0019 23.6 3.9 50 236-293 17-66 (82)
435 COG0296 GlgB 1,4-alpha-glucan 30.3 61 0.0013 34.5 4.0 33 265-297 212-244 (628)
436 PF13872 AAA_34: P-loop contai 30.2 34 0.00073 32.8 2.0 25 266-290 158-183 (303)
437 COG3870 Uncharacterized protei 30.1 2.5E+02 0.0054 22.1 6.2 55 388-445 5-66 (109)
438 PF00408 PGM_PMM_IV: Phosphogl 29.8 1.1E+02 0.0024 22.2 4.3 34 410-444 40-73 (73)
439 TIGR02402 trehalose_TreZ malto 29.6 1.4E+02 0.003 31.5 6.6 51 245-295 123-188 (542)
440 PF02593 dTMP_synthase: Thymid 29.1 90 0.002 28.5 4.4 58 232-296 61-119 (217)
441 cd01821 Rhamnogalacturan_acety 28.8 98 0.0021 27.2 4.7 43 242-284 103-150 (198)
442 PRK05234 mgsA methylglyoxal sy 28.3 1.1E+02 0.0024 25.8 4.6 46 237-287 66-113 (142)
443 PRK08883 ribulose-phosphate 3- 28.2 4.6E+02 0.01 23.9 13.0 53 234-286 118-173 (220)
444 TIGR02403 trehalose_treC alpha 28.1 1.2E+02 0.0026 32.0 5.9 57 234-290 25-98 (543)
445 COG3155 ElbB Uncharacterized p 28.0 21 0.00045 30.6 0.1 66 277-346 84-154 (217)
446 TIGR03849 arch_ComA phosphosul 27.9 58 0.0013 30.1 3.0 50 234-286 10-60 (237)
447 PF03853 YjeF_N: YjeF-related 27.6 1.5E+02 0.0033 25.7 5.6 64 247-314 99-164 (169)
448 cd01394 radB RadB. The archaea 27.4 4.5E+02 0.0097 23.4 9.0 45 246-290 103-159 (218)
449 KOG1465 Translation initiation 27.2 5.7E+02 0.012 24.6 12.0 127 143-297 150-278 (353)
450 cd01822 Lysophospholipase_L1_l 27.0 85 0.0018 26.8 3.9 39 246-284 101-139 (177)
451 cd01017 AdcA Metal binding pro 26.7 1.8E+02 0.0039 27.5 6.4 120 143-285 127-248 (282)
452 PRK06427 bifunctional hydroxy- 26.5 1E+02 0.0022 28.8 4.6 45 237-289 64-109 (266)
453 PF00549 Ligase_CoA: CoA-ligas 26.4 61 0.0013 27.8 2.7 30 235-264 62-91 (153)
454 PF13167 GTP-bdg_N: GTP-bindin 26.2 2.1E+02 0.0045 22.3 5.4 54 234-288 9-66 (95)
455 COG1088 RfbB dTDP-D-glucose 4, 26.2 6.1E+02 0.013 24.6 10.2 64 231-296 59-137 (340)
456 PRK00910 ribB 3,4-dihydroxy-2- 26.0 1.1E+02 0.0023 28.0 4.3 36 245-285 167-202 (218)
457 PF02603 Hpr_kinase_N: HPr Ser 25.7 99 0.0022 25.4 3.8 39 237-286 73-111 (127)
458 COG4422 Bacteriophage protein 25.7 1.1E+02 0.0024 26.9 4.1 26 261-286 197-222 (250)
459 cd01840 SGNH_hydrolase_yrhL_li 25.6 1.3E+02 0.0029 25.2 4.8 46 234-284 68-114 (150)
460 PRK09505 malS alpha-amylase; R 25.4 1.6E+02 0.0035 31.9 6.3 58 233-290 227-315 (683)
461 cd04915 ACT_AK-Ectoine_2 ACT d 25.4 1.7E+02 0.0037 20.7 4.6 45 396-443 18-64 (66)
462 PRK10933 trehalose-6-phosphate 25.2 1.6E+02 0.0035 31.0 6.2 58 234-291 31-105 (551)
463 COG0742 N6-adenine-specific me 25.1 1.7E+02 0.0036 26.1 5.3 28 94-129 41-68 (187)
464 PF02677 DUF208: Uncharacteriz 25.1 1.4E+02 0.0029 26.3 4.6 44 238-287 15-62 (176)
465 PRK08286 cbiC cobalt-precorrin 25.1 5.3E+02 0.011 23.5 10.1 50 306-362 157-210 (214)
466 PF03652 UPF0081: Uncharacteri 24.8 2.4E+02 0.0051 23.5 6.0 56 234-290 39-98 (135)
467 PF08543 Phos_pyr_kin: Phospho 24.7 57 0.0012 30.2 2.5 28 263-290 69-96 (246)
468 PF01408 GFO_IDH_MocA: Oxidore 24.4 1.9E+02 0.0041 22.8 5.3 43 235-285 76-118 (120)
469 KOG3974 Predicted sugar kinase 24.3 1.3E+02 0.0028 28.2 4.5 48 234-286 91-138 (306)
470 PRK00014 ribB 3,4-dihydroxy-2- 24.3 1.2E+02 0.0025 27.9 4.2 35 246-285 172-206 (230)
471 PRK10886 DnaA initiator-associ 24.1 5E+02 0.011 23.2 8.3 41 236-285 101-141 (196)
472 PF02570 CbiC: Precorrin-8X me 23.9 84 0.0018 28.2 3.2 49 305-360 143-195 (198)
473 PRK01018 50S ribosomal protein 23.8 2.1E+02 0.0046 22.3 5.2 43 236-286 22-64 (99)
474 PF07905 PucR: Purine cataboli 23.7 1.6E+02 0.0034 24.0 4.6 45 234-285 57-104 (123)
475 PF00128 Alpha-amylase: Alpha 23.2 70 0.0015 30.2 2.9 26 265-290 50-75 (316)
476 COG0106 HisA Phosphoribosylfor 23.1 6.1E+02 0.013 23.5 12.1 49 234-285 148-196 (241)
477 PF00586 AIRS: AIR synthase re 23.0 1.6E+02 0.0034 22.6 4.3 21 265-285 73-93 (96)
478 PLN00125 Succinyl-CoA ligase [ 22.9 1.6E+02 0.0035 28.3 5.2 43 235-284 83-125 (300)
479 TIGR00097 HMP-P_kinase phospho 22.8 1.6E+02 0.0035 27.3 5.2 46 236-289 57-103 (254)
480 PRK04148 hypothetical protein; 22.8 4.5E+02 0.0098 21.9 8.9 24 262-285 84-107 (134)
481 PF04909 Amidohydro_2: Amidohy 22.7 1.4E+02 0.0031 27.4 4.8 51 234-286 86-136 (273)
482 PF07085 DRTGG: DRTGG domain; 22.5 3.5E+02 0.0076 21.0 6.4 48 228-286 44-91 (105)
483 TIGR00530 AGP_acyltrn 1-acyl-s 22.5 2.3E+02 0.005 22.5 5.6 47 235-284 79-125 (130)
484 PRK06860 lipid A biosynthesis 22.3 4.5E+02 0.0098 25.2 8.3 20 190-209 125-144 (309)
485 cd04920 ACT_AKiii-DAPDC_2 ACT 22.3 1.5E+02 0.0033 20.7 3.8 45 396-443 17-61 (63)
486 PRK01792 ribB 3,4-dihydroxy-2- 22.2 1.4E+02 0.003 27.2 4.2 35 246-285 167-201 (214)
487 cd01018 ZntC Metal binding pro 22.2 2.5E+02 0.0053 26.3 6.3 120 143-285 126-245 (266)
488 COG0648 Nfo Endonuclease IV [D 22.1 1.5E+02 0.0033 28.2 4.7 54 236-290 125-179 (280)
489 PRK08091 ribulose-phosphate 3- 22.0 2.5E+02 0.0054 25.9 6.0 54 233-286 129-185 (228)
490 COG1041 Predicted DNA modifica 22.0 3.3E+02 0.0072 26.8 7.1 111 142-280 182-304 (347)
491 PRK09361 radB DNA repair and r 21.9 4.8E+02 0.01 23.4 8.0 46 245-290 106-163 (225)
492 PLN02438 inositol-3-phosphate 21.9 4.9E+02 0.011 27.0 8.4 56 233-291 245-310 (510)
493 COG1625 Fe-S oxidoreductase, r 21.8 1.5E+02 0.0033 29.7 4.8 47 233-279 188-244 (414)
494 PF03796 DnaB_C: DnaB-like hel 21.7 1.4E+02 0.0031 27.7 4.6 52 234-285 113-175 (259)
495 COG0062 Uncharacterized conser 21.5 2.5E+02 0.0053 25.4 5.7 66 247-316 119-186 (203)
496 cd01122 GP4d_helicase GP4d_hel 21.4 1.2E+02 0.0026 28.3 4.1 47 239-285 133-186 (271)
497 cd01125 repA Hexameric Replica 21.4 1.8E+02 0.0039 26.7 5.1 51 235-285 100-154 (239)
498 TIGR03677 rpl7ae 50S ribosomal 21.2 1.4E+02 0.003 24.3 3.7 50 236-292 32-81 (117)
499 PRK11524 putative methyltransf 21.0 1.7E+02 0.0038 27.7 5.0 53 233-285 14-79 (284)
500 PRK05409 hypothetical protein; 20.8 1.2E+02 0.0026 28.9 3.7 32 257-288 66-97 (281)
No 1
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=8.1e-86 Score=626.89 Aligned_cols=379 Identities=52% Similarity=0.863 Sum_probs=358.3
Q ss_pred chHHHHHHHHhcccccCCCCceEEEeecccEEEecCCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCH
Q 013008 61 NNKEVMEAEKKLLVGTYNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSI 140 (451)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~G~~l~d~~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~ 140 (451)
.+...++...++..+.|.+.|+++++|+|+|+||.+|++||||.+|+++++|||+||++++|+.+|++++.+.++.++++
T Consensus 5 ~~~~~~~~~~~~~~~~Y~~~~~~~~~G~G~~v~D~~G~~YlDf~~Giav~~lGH~hP~iv~al~~Q~~kl~h~sn~~~~~ 84 (404)
T COG4992 5 LTAATIELFMKYLMPTYGRLPVVIVRGEGAYVWDQQGREYLDFAAGIAVNNLGHCHPALVEALKEQAEKLWHVSNLFYNE 84 (404)
T ss_pred cHHHHHHHHHHhhhcccCcCceeEEeccccEEECCCCCEeeeeccceeeeccCCCCHHHHHHHHHHHHHhhhcccccCCh
Confidence 45566777788899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccC-CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCC
Q 013008 141 PQIELAKRLVACSF-ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSP 219 (451)
Q Consensus 141 ~~~~l~~~l~~~~~-~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~ 219 (451)
+..+|+++|++..+ .++|+|+|||+||||+|+|+||+|++ + +.+.+||.|.++|||+|.+++++++.+.|+.+
T Consensus 85 ~~~~la~~L~~~s~~~d~vff~NSGaEA~EaAiKlARk~~~--~----~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~ 158 (404)
T COG4992 85 PQAELAEKLVELSPFADRVFFCNSGAEANEAALKLARKYTG--D----PEKSKIIAFENSFHGRTLGALSATGQPKYRKG 158 (404)
T ss_pred HHHHHHHHHHhhCccccEEEEcCCcHHHHHHHHHHHHHHcC--C----CCCcEEEEEcCCcCCccceeeeccCChhhccC
Confidence 99999999999997 99999999999999999999999986 1 14779999999999999999999999999999
Q ss_pred CcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccc
Q 013008 220 FEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLW 299 (451)
Q Consensus 220 ~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~ 299 (451)
|.|+.+++.++||||++++++++++ ++++||+||+||++|+++++++||+++++||++||++||+||||||+||||++|
T Consensus 159 F~Pl~~g~~~vpfnDi~al~~ai~~-~taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRTGk~f 237 (404)
T COG4992 159 FGPLLPGFRHVPFNDIEALEAAIDE-DTAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRTGKLF 237 (404)
T ss_pred CCCCCCCceecCCCCHHHHHHHhcc-CeEEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCccchHH
Confidence 9999999999999999999999987 899999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCcceeeecccccCCcccccccccHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH---------
Q 013008 300 AHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS--------- 370 (451)
Q Consensus 300 ~~~~~~~~pdi~t~sK~lg~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~--------- 370 (451)
+++++|+.|||+|++|+||||+|+|++++++++.+.+.++.|++||+|||++|+++.++|+++.+++++++
T Consensus 238 A~e~~gV~PDI~tlaK~LgGG~PigA~la~~~~~~~~~~G~HgSTfGGNpLacAv~~a~l~~l~~e~ll~~v~~~g~~~~ 317 (404)
T COG4992 238 AYEHYGVEPDILTLAKALGGGFPIGAMLATEEIASAFTPGDHGSTFGGNPLACAVALAVLEVLLEEGLLENVREKGEYLL 317 (404)
T ss_pred HHHHhCCCCCEEEeeccccCCccceeeEEchhhhhcCCCCcccCCCCcCHHHHHHHHHHHHHHcchhHHHHHHHHHHHHH
Confidence 99999999999999999999999999999988888899999999999999999999999999999888877
Q ss_pred -----HHhCCCCcceecccceeEEEEecCC--hHHHHHHHHHCCceeeecCCCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 013008 371 -----KLARNPHVKDVRGLGLIIGIEFDVS--ATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTL 443 (451)
Q Consensus 371 -----~~~~~~~~~~v~g~G~~~~~~~~~~--~~~~~~~l~~~Gv~~~~~~~~~~iri~~~~~~t~e~i~~~l~~l~~~l 443 (451)
+..++|.+..+||+|+|+++++..+ +.++.+.|.++||++.+.+. +++||.||+.+++|++++++++|++++
T Consensus 318 ~~L~~l~~~~~~v~~vRG~GLmiGiel~~~~~a~~~~~~~~~~gvL~~~a~~-~ViR~~PpL~i~~eei~~~~~~l~~~l 396 (404)
T COG4992 318 QRLRELKRRYPLVKEVRGRGLMIGIELKEPYRARDIVRALREEGVLVLPAGP-NVIRFLPPLVITEEEIDEALDALERAL 396 (404)
T ss_pred HHHHHHhhcCCceeeeecceeEEEEEecCcccHHHHHHHHHHCCeEEecCCC-CeEEecCCccCCHHHHHHHHHHHHHHH
Confidence 4456778899999999999999654 78999999999999999887 899999999999999999999999999
Q ss_pred HHHh
Q 013008 444 PVLD 447 (451)
Q Consensus 444 ~~~~ 447 (451)
+...
T Consensus 397 ~~~~ 400 (404)
T COG4992 397 AAAS 400 (404)
T ss_pred HHhh
Confidence 8754
No 2
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=100.00 E-value=1.8e-76 Score=579.83 Aligned_cols=377 Identities=44% Similarity=0.748 Sum_probs=337.1
Q ss_pred cchHHHHHHHHhcccccCCC--CceEEEeecccEEEecCCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccCCC
Q 013008 60 RNNKEVMEAEKKLLVGTYNR--APVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMY 137 (451)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~--~p~~~~~~~G~~l~d~~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~ 137 (451)
+...+++++..++..++|.. +|+++++++|+||||+|||+||||.++.++.++||+||+|++|+.+|++++.+....+
T Consensus 16 ~~~~~~~~r~~~~~~r~~~~~~~p~~~~ra~G~~l~DvdG~~ylDf~sgi~v~~~GH~hP~Vv~Av~~q~~~~~h~~~~~ 95 (447)
T COG0160 16 PKALELIERREEALARSYGRFRFPLVIVRAEGAYLYDVDGNEYLDFLSGIAVLNLGHNHPRVVEAVKRQLAKLNHTHTRD 95 (447)
T ss_pred cchHHHHHHHHHHhccccccccCcceEEecccCEEEeCCCCEEEEcccCcchhccCCCCHHHHHHHHHHHHHhhcccCCc
Confidence 35666777777777777766 7999999999999999999999999999999999999999999999999988664444
Q ss_pred -CCHHHHHHHHHHhhccC---CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCC
Q 013008 138 -YSIPQIELAKRLVACSF---ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK 213 (451)
Q Consensus 138 -~~~~~~~l~~~l~~~~~---~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~ 213 (451)
++++..+++++|.+..+ ..+++|++||+|||++|+|+||.+|+ +..||.|+++|||+|.+++++++.
T Consensus 96 ~~~e~~v~~ae~L~~~~p~~~~~~~~f~~sGaeA~E~AiKiAr~~Tg---------r~~viaf~~afHG~T~galslT~~ 166 (447)
T COG0160 96 LYYEPYVELAEKLTALAPGSGLKKVFFGNSGAEAVEAAIKIARAYTG---------RPGVIAFDGAFHGRTLGALSLTGS 166 (447)
T ss_pred ccchhHHHHHHHHHHhCCcccCCeEEecCCcHHHHHHHHHHHHHHhC---------CCcEEEECCcccccchhhHHhccC
Confidence 44889999999999886 57899999999999999999999995 889999999999999999999875
Q ss_pred CCc-CCCCcCCCCCeeEeeCCC-----------------HHHHHHhcC-----CCCeEEEEEccccCCCCccccCHHHHH
Q 013008 214 EHY-RSPFEPVMPGVNFVEYGN-----------------IEATRKLIQ-----PGKTAAVFVEPIQGEGGIYSATKEFLQ 270 (451)
Q Consensus 214 ~~~-~~~~~~~~~~~~~~~~~d-----------------~~~le~~l~-----~~~~aavi~ep~~~~~G~~~~~~~~l~ 270 (451)
... ...+.+..+++..+|+++ .+.+++.+. ..++|+||+||+||++|.+++|++||+
T Consensus 167 ~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~ 246 (447)
T COG0160 167 KPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDALEYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLK 246 (447)
T ss_pred ccccccCCCCCCCCeEEecCCccccCcccCchhhhhHHHHHHHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHH
Confidence 543 345667777788887653 344666443 457999999999999999999999999
Q ss_pred HHHHHHHHhCCEEEEeccccCCCcccccccccccCCCcceeeecccccCCcccccccccHHHHhhccCCCccCCCCCcHH
Q 013008 271 FLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINYGDHGSTFAGSPL 350 (451)
Q Consensus 271 ~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~t~sK~lg~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~ 350 (451)
+|+++|+|||+++|+||||+||||||++|+++++|+.|||+|+||++++|+|+|+|++++++++ +.++.+.+||+|||+
T Consensus 247 ~l~~~~~~~gillI~DEVQtG~GRTG~~fa~E~~gv~PDivt~aK~ig~G~Pl~avv~r~ei~~-~~~g~~~~Tf~GNpv 325 (447)
T COG0160 247 ALRKLCREHGILLIADEVQTGFGRTGKMFAFEHFGVEPDIVTLAKSLGGGLPLSAVVGRAEIMD-WPPGGHGGTFGGNPV 325 (447)
T ss_pred HHHHHHHHcCCEEEEeccccCCCccccchhhhhcCCCCCEEEecccccCCCceeEEeccHHhcc-cCCcccCCCCCcCHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999 777889999999999
Q ss_pred HHHHHHHHHHHhcChHHHHH--------------HHhCCCCcceecccceeEEEEec----------CChHHHHHHHHHC
Q 013008 351 VCNAAIAVLDKISNPAFLAS--------------KLARNPHVKDVRGLGLIIGIEFD----------VSATPVVDACRDS 406 (451)
Q Consensus 351 ~~aaa~aal~~~~~~~~~~~--------------~~~~~~~~~~v~g~G~~~~~~~~----------~~~~~~~~~l~~~ 406 (451)
+|+|++++|+.++++++.++ +.+++|.+.+|||.|+|+++++. ....+++.+|+++
T Consensus 326 a~Aaa~AvL~vie~e~L~~~a~~~G~~l~~~L~~l~~~~~~IgdVRG~Glm~giE~v~d~~t~~p~~~~~~~i~~~~~~~ 405 (447)
T COG0160 326 ACAAALAVLDVIEEENLLERAAELGEYLRDRLEELQEKHPLIGDVRGLGLMIGVELVKDRDTKEPDAELAAKIVARAFER 405 (447)
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHhhcCceecccccceEEEEEEecCCCCCCCCHHHHHHHHHHHHHc
Confidence 99999999999988888777 56889999999999999999993 1145788999999
Q ss_pred CceeeecCC-CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 013008 407 GLLVLTAGK-GNVVRLVPPLIISEQELDQAVEILCKTLPVL 446 (451)
Q Consensus 407 Gv~~~~~~~-~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~ 446 (451)
|+++..+|. ++++||.||+++++|++|+++++|+++++++
T Consensus 406 Glil~~~G~~~nviRi~PPL~is~e~~d~~l~il~~al~~~ 446 (447)
T COG0160 406 GLLLLTCGPHGNVLRILPPLTISDEELDEGLDILEEALKEA 446 (447)
T ss_pred CCEEeccCCCCcEEEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence 999998874 6999999999999999999999999999864
No 3
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=5.9e-75 Score=527.57 Aligned_cols=382 Identities=37% Similarity=0.592 Sum_probs=349.7
Q ss_pred chHHHHHHHHhcccccCCCCceEEEeecccEEEecCCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCH
Q 013008 61 NNKEVMEAEKKLLVGTYNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSI 140 (451)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~G~~l~d~~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~ 140 (451)
.++..++++.++..++|+|+|+++.+++|+++||.+|++|+||.+++++.+.|||||.|.+|+.+|+++++..+..++++
T Consensus 22 aS~~~~~~E~k~~ahnyhpLpvvf~ka~g~~vwD~eGk~ylDflsaysaVnqGhchpki~~aLqeq~~kLtlssrafYnd 101 (427)
T KOG1402|consen 22 ASQQIMERENKYGAHNYHPLPVVFSKAKGSRVWDPEGKEYLDFLSAYSAVNQGHCHPKIIKALQEQADKLTLSSRAFYND 101 (427)
T ss_pred chhhhhchhhhcccccCCcCceEEEecCCcEEECCCccchhhhhhhhhhcccCCCCHHHHHHHHHHHhHhhhhhHHHhhh
Confidence 44557888889999999999999999999999999999999999999999999999999999999999988777778888
Q ss_pred HHHHHHHHHhhccCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCC
Q 013008 141 PQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPF 220 (451)
Q Consensus 141 ~~~~l~~~l~~~~~~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~ 220 (451)
...++++.+.++++.+.|+.+|+|.||++.|++++|+|.......+ ..+.+|+...++|||.+.+++++++++.....|
T Consensus 102 ~~~~f~~~vt~lf~~~kvlpmnTGaEa~Eta~KLaR~wgy~~K~ip-~nka~il~~~~nFhGrT~~ais~s~d~ds~~~f 180 (427)
T KOG1402|consen 102 VLGEFAEYVTKLFGYDKVLPMNTGAEAVETACKLARKWGYRKKNIP-KNKAKILSAENNFHGRTLGAISLSTDPDSWDGF 180 (427)
T ss_pred hHHHHHHHHHHhcCcceeeecccchhHHHHHHHHHHHHHHhhccCC-ccceeEEEecccccCceeeeEEecCCcchhhcc
Confidence 8999999999999999999999999999999999997754333220 135678889999999999999999888766788
Q ss_pred cCCCCC-eeEeeCCCHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccc
Q 013008 221 EPVMPG-VNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLW 299 (451)
Q Consensus 221 ~~~~~~-~~~~~~~d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~ 299 (451)
.|..|+ +..+||+|+++|+.+++..+++++++||+||++|+++|+++||+++++||++|++++|.||||||+||+|+++
T Consensus 181 gp~~P~~~~~v~Y~d~eale~~l~~~~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl~RTGk~l 260 (427)
T KOG1402|consen 181 GPFLPGVVDKVPYGDAEALEVALKSPNVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQTGLARTGKLL 260 (427)
T ss_pred CCCCCCcceeeccCCHHHHHHHhcCCCeeEEEeeccccccceEeCCchhHHHHHHHHHhhcEEEEehhhhhcccccCcEE
Confidence 899999 7899999999999999988999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCcceeeecccccCC-cccccccccHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH--------
Q 013008 300 AHEHYGIFPDIMTLAKPLAGG-LPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS-------- 370 (451)
Q Consensus 300 ~~~~~~~~pdi~t~sK~lg~G-~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~-------- 370 (451)
++++.++.||++.|+|+|+|| +|++++++++++|..+.++.|++||++||++|+++.|+|+++.++++.++
T Consensus 261 a~d~env~PDivilgKalSGG~~Pvsavl~~~~im~~~~pgeHgsTyggNpLg~~vaiAalevi~eekL~era~~lG~~l 340 (427)
T KOG1402|consen 261 ACDYENVRPDIVILGKALSGGVYPVSAVLADDDIMLNIKPGEHGSTYGGNPLGCAVAIAALEVIVEEKLVERAAKLGEIL 340 (427)
T ss_pred EeehhhcCCCeEEEeccccCCeeeeEEEEecHHHHhccCCCccccccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999 99999999999999999999999999999999999999999999998888
Q ss_pred ------HHhCCC-CcceecccceeEEEEec------CChHHHHHHHHHCCceeeecCCCCEEEEeCCCCCCHHHHHHHHH
Q 013008 371 ------KLARNP-HVKDVRGLGLIIGIEFD------VSATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVE 437 (451)
Q Consensus 371 ------~~~~~~-~~~~v~g~G~~~~~~~~------~~~~~~~~~l~~~Gv~~~~~~~~~~iri~~~~~~t~e~i~~~l~ 437 (451)
+.+.+| .+..+||+|++.++.++ .+++++|-.|.++|++..|.+. +.+||.||++++++|+++.++
T Consensus 341 ~~~L~~l~~~~p~~v~~VRGrGl~~ai~i~~~~~~~~~aw~~cl~lk~~g~LAkptH~-~IiRfaPPL~I~e~dl~eg~e 419 (427)
T KOG1402|consen 341 RDQLNKLQKKFPHVVKEVRGRGLLNAIVINPSKTSGQDAWDVCLALKENGLLAKPTHG-NIIRFAPPLVISEEDLREGIE 419 (427)
T ss_pred HHHHHhccccccchhheeeccceEEEEEeccccccchhHHHHHHcccccccccCCCCC-CeEEecCCcccCHHHHHHHHH
Confidence 234455 46889999999999984 3467788888899999999875 899999999999999999999
Q ss_pred HHHHHHH
Q 013008 438 ILCKTLP 444 (451)
Q Consensus 438 ~l~~~l~ 444 (451)
+|.+++.
T Consensus 420 ~i~k~i~ 426 (427)
T KOG1402|consen 420 AIEKTIA 426 (427)
T ss_pred HHHHHhc
Confidence 9998874
No 4
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=100.00 E-value=1.1e-71 Score=535.54 Aligned_cols=382 Identities=26% Similarity=0.391 Sum_probs=327.3
Q ss_pred hhccccccchhhhccCCCCCCcchHHHHHHHHhcccccCCCCceEEEeecccEEEecCCCEEEeeccCcccccCCCCCHH
Q 013008 39 AAASVNVEVNDAARGSAGGLGRNNKEVMEAEKKLLVGTYNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDAD 118 (451)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~G~~l~d~~G~~~iD~~~~~~~~~lG~~~p~ 118 (451)
...|.++ |++|++++|||+++++|.+. .....|+++++++|+++||+|||+||||+.+|+++.|||+||.
T Consensus 4 ~~~S~~l-~~~A~~~~pGGvnspvra~~---------~v~~~P~fi~~g~Ga~l~DvDGn~YIDy~~~~Gp~ilGH~~p~ 73 (432)
T COG0001 4 FPKSEAL-FERAKKVIPGGVNSPVRAFK---------SVGGYPIFIERGKGAYLTDVDGNEYIDYVLGWGPLILGHAHPA 73 (432)
T ss_pred ccchHHH-HHHHhhhCCCCCCccccccC---------CCCCCCeeEEeccCCeEEeCCCCEeeehhccCcccccCCCCHH
Confidence 4577888 99999999999999998764 1224799999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccccCCCCCHHHHHHHHHHhhccC-CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEc
Q 013008 119 WIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSF-ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFT 197 (451)
Q Consensus 119 v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~ 197 (451)
|++|+++++++... ...+++...++++.++++++ .|+|.|+||||||++.|||+||.||+ |++||.|+
T Consensus 74 V~~Av~~~l~~G~~--fg~Pte~Ei~~Aell~~~~p~~e~vrfvnSGTEAtmsAiRlARa~Tg---------R~kIikF~ 142 (432)
T COG0001 74 VVEAVQEQLERGLS--FGAPTELEVELAELLIERVPSIEKVRFVNSGTEATMSAIRLARAYTG---------RDKIIKFE 142 (432)
T ss_pred HHHHHHHHHHhcCC--CCCCCHHHHHHHHHHHHhcCcccEEEEecchhHHHHHHHHHHHHhhC---------CCeEEEEc
Confidence 99999999998643 45678889999999999998 59999999999999999999999995 99999999
Q ss_pred CCccCChhhhhhccC--CCCcCCCCcCCCC--------CeeEeeCCCHHHHHHhcC--CCCeEEEEEccccCCCCccccC
Q 013008 198 NSFHGRTMGALALTS--KEHYRSPFEPVMP--------GVNFVEYGNIEATRKLIQ--PGKTAAVFVEPIQGEGGIYSAT 265 (451)
Q Consensus 198 ~~yhg~~~~~~~~~~--~~~~~~~~~~~~~--------~~~~~~~~d~~~le~~l~--~~~~aavi~ep~~~~~G~~~~~ 265 (451)
++|||+.+..+.-.+ ...... |..+ .+..+||||+++++++++ .+++|+||+||+.+|.|+++|.
T Consensus 143 G~YHG~~D~~lv~agsg~~t~g~---p~s~Gvp~~~a~~ti~~~yND~~al~~~~~~~g~~IAaVIvEPv~gn~g~i~p~ 219 (432)
T COG0001 143 GCYHGHSDSLLVKAGSGAATLGS---PSSPGVPADVAKHTLVLPYNDLEALEEAFEEYGDDIAAVIVEPVAGNMGVVPPE 219 (432)
T ss_pred CCCCCCccHHHhhcCcCcccCCC---CCCCCCChhhhccEEEecCCCHHHHHHHHHHcCCcEEEEEeccccCCCCCCCCC
Confidence 999999988876432 221111 2222 345889999999999998 4699999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCEEEEeccccCCCcccccccccccCCCcceeeecccccCCcccccccccHHHHhhccCC---Ccc
Q 013008 266 KEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINYG---DHG 342 (451)
Q Consensus 266 ~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~t~sK~lg~G~~iG~v~~~~~i~~~~~~~---~~~ 342 (451)
++||++|++||++||++||+|||+||| |.+.+++++++|++||++||||.+|||+|+|++.+++++|+.+.+. .+.
T Consensus 220 ~~Fl~~Lr~lt~e~G~lLI~DEViTGF-R~~~gGaq~~~gi~PDlttlGKiIGGGlP~ga~gGr~eiM~~~~p~g~vyqa 298 (432)
T COG0001 220 PGFLEGLRELTEEHGALLIFDEVITGF-RVALGGAQGYYGVEPDLTTLGKIIGGGLPIGAFGGRAEIMEQLAPLGPVYQA 298 (432)
T ss_pred HHHHHHHHHHHHHcCcEEEEecchhhc-ccCCcccccccCcCcchhhhhhhhcCCcceeeeccHHHHHhhhCCCCCcccc
Confidence 999999999999999999999999999 8877889999999999999999999999999999999999988653 688
Q ss_pred CCCCCcHHHHHHHHHHHHHhcC-hHHHHH--------------HHhCCCCcceecccceeEEEEecC-------------
Q 013008 343 STFAGSPLVCNAAIAVLDKISN-PAFLAS--------------KLARNPHVKDVRGLGLIIGIEFDV------------- 394 (451)
Q Consensus 343 ~t~~~~~~~~aaa~aal~~~~~-~~~~~~--------------~~~~~~~~~~v~g~G~~~~~~~~~------------- 394 (451)
+|+++||++++|++++|+.+.+ +..+++ ..+++..--.+...|.|+.+.|..
T Consensus 299 GT~sgnplamaAG~atl~~l~~~~~~y~~l~~~~~~L~~gl~~~~~~~g~~~~v~~~gsm~~i~F~~~~~~n~~da~~sd 378 (432)
T COG0001 299 GTLSGNPLAMAAGLATLEELMTEEGVYERLDALGERLAEGLRAAAERHGIPLTVNRVGSMFGIFFTEEGVRNYADAKRSD 378 (432)
T ss_pred CCCCCcHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeecceEEEEecCCCCCCHHHHHhhc
Confidence 9999999999999999999876 344444 223333223467788888888731
Q ss_pred --ChHHHHHHHHHCCceeeecCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHhh
Q 013008 395 --SATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTLPVLDS 448 (451)
Q Consensus 395 --~~~~~~~~l~~~Gv~~~~~~~~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~~~ 448 (451)
...++.+.|+++||++.|+.. -...++..||+|+||+++++++++++++..
T Consensus 379 ~~~~~~~~~~~l~~GV~l~ps~~---ea~flS~ahte~di~~~~~a~~~~~~~~~~ 431 (432)
T COG0001 379 VERFAKFFHHLLNRGVYLAPSQF---EAGFLSTAHTEEDIDRTLEAADEAFKELAG 431 (432)
T ss_pred hHHHHHHHHHHHhCCcccCCccc---cceeeecccCHHHHHHHHHHHHHHHHHhhc
Confidence 134567789999999999864 244558899999999999999999988764
No 5
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=100.00 E-value=3.1e-71 Score=539.17 Aligned_cols=376 Identities=38% Similarity=0.631 Sum_probs=329.0
Q ss_pred HHhcccccCCC------CceEEEeecccEEEecCCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccc-cCCCCCHH
Q 013008 69 EKKLLVGTYNR------APVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHV-SNMYYSIP 141 (451)
Q Consensus 69 ~~~~~~~~~~~------~p~~~~~~~G~~l~d~~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~-~~~~~~~~ 141 (451)
+.++.+++|.. .|+++++++|.|+||.||++|||..|++|++++||+||+|.+|+.+|++++.+. ...+.+.+
T Consensus 9 d~~~~whP~t~~~~~~~~~~~i~~aeG~yl~d~~G~r~lDg~sg~W~~~~Gh~~~~i~~Ai~~Q~~~l~~~~~~~~t~~P 88 (449)
T COG0161 9 DLSHLWHPFTQMRDPLAEPRVIVRAEGVYLTDIDGRRYLDGMSGLWCVNHGHGRPEIAEAIKKQLDKLPHVMFGGFTHEP 88 (449)
T ss_pred hhhheeccccccccccccceeeeecceeEEEeCCCCEEEecccHHHHhhcCcCCHHHHHHHHHHHHhCCchhhcccCCch
Confidence 55666765542 278999999999999999999999999999999999999999999999998876 34455666
Q ss_pred HHHHHHHHhhccC---CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcC-
Q 013008 142 QIELAKRLVACSF---ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYR- 217 (451)
Q Consensus 142 ~~~l~~~l~~~~~---~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~- 217 (451)
..+|+++|++..+ .++|+|++||+|||+.|+|+++.|++.++.+ .|.++|....+|||.+.+++++++....+
T Consensus 89 a~~LA~~L~~~aP~~~l~~vFf~~sGSeAvEtAlKma~qY~~~~G~p---~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~ 165 (449)
T COG0161 89 AIELAEKLAELAPEGGLDHVFFTDSGSEAVETALKMALQYWRARGQP---QRKKFISRRNGYHGDTLGAMSVGGPVALRH 165 (449)
T ss_pred HHHHHHHHHHhCCCCCccEEEEeCCchHHHHHHHHHHHHHHHhcCCC---cceEEEEeccCcCcccchheeccCchhhhh
Confidence 9999999999997 8899999999999999999999999988876 58889999999999999999999843333
Q ss_pred CCCcCCCCCeeEeeCC-----------------CHHHHHHhcC---CCCeEEEEEccccCC-CCccccCHHHHHHHHHHH
Q 013008 218 SPFEPVMPGVNFVEYG-----------------NIEATRKLIQ---PGKTAAVFVEPIQGE-GGIYSATKEFLQFLRDAC 276 (451)
Q Consensus 218 ~~~~~~~~~~~~~~~~-----------------d~~~le~~l~---~~~~aavi~ep~~~~-~G~~~~~~~~l~~l~~l~ 276 (451)
..+.++.+++.++|.+ ++++||++|. +++++|||+||+.+. +|+++|+++||+++++||
T Consensus 166 ~~~~~ll~~~~~~~~P~~y~~~~~~~~~~~~~~~a~~le~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC 245 (449)
T COG0161 166 AFYDPLLPEVLHLPAPYAYRRGFFGEGDEEFAEAADELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREIC 245 (449)
T ss_pred hhccccccCceecCCCcccccCCCCCChHHHHHHHHHHHHHHHhcCcccEEEEEecccccccCCcccCChHHHHHHHHHH
Confidence 4444555555444332 2567888886 378999999998777 999999999999999999
Q ss_pred HHhCCEEEEeccccCCCcccccccccccCCCcceeeecccccCC-cccccccccHHHHhhccCC-----CccCCCCCcHH
Q 013008 277 DDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAGG-LPIGAALVTEKVASAINYG-----DHGSTFAGSPL 350 (451)
Q Consensus 277 ~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~t~sK~lg~G-~~iG~v~~~~~i~~~~~~~-----~~~~t~~~~~~ 350 (451)
++||++||+|||.|||||||++|+++++|++|||+|++|+|++| +|+|+++++++|.+.+... .|++||++||+
T Consensus 246 ~ky~ILlI~DEV~tGFGRTG~~FA~e~~gi~PDi~~~aKGLT~GY~Pl~a~l~~~~I~~~~~~~~~~~f~HG~TYsghPl 325 (449)
T COG0161 246 DKYGILLIADEVATGFGRTGKMFACEHAGIVPDILCLAKGLTGGYLPLSAVLTSDRIYEAFSDGDAGAFMHGHTYSGNPL 325 (449)
T ss_pred HHcCcEEEeecceeCCCcCchhhhhhhcCCCCCeeeecccccccchhhHhHhhhHHHHHHHhcccCCeeccCCccccCHH
Confidence 99999999999999999999999999999999999999999999 8999999999999988653 68999999999
Q ss_pred HHHHHHHHHHHhcChHHHHH-----------H---HhCCCCcceecccceeEEEEec--CC---------hHHHHHHHHH
Q 013008 351 VCNAAIAVLDKISNPAFLAS-----------K---LARNPHVKDVRGLGLIIGIEFD--VS---------ATPVVDACRD 405 (451)
Q Consensus 351 ~~aaa~aal~~~~~~~~~~~-----------~---~~~~~~~~~v~g~G~~~~~~~~--~~---------~~~~~~~l~~ 405 (451)
+||||++.|++++++++.++ + +..+|.+.++|+.|++.++++. .. ...+.+.+++
T Consensus 326 acAaAla~L~i~e~e~l~~~~~~~~~~l~~~L~~~l~~~p~VgdVR~~Gli~~iElv~d~~t~~~f~~~~~~~~~~~~~e 405 (449)
T COG0161 326 ACAAALANLDILEEEDLLERVAEIGAYLQAGLQAALADHPLVGDVRGLGLIGAIELVADKATKTPFEARVGARVRAAALE 405 (449)
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcccCCcEEEeeccceEEEEEEecccccccchhhhHHHHHHHHHHH
Confidence 99999999999999998887 2 3456799999999999999992 22 4578888999
Q ss_pred CCceeeecCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHhhc
Q 013008 406 SGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTLPVLDSN 449 (451)
Q Consensus 406 ~Gv~~~~~~~~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~~~~ 449 (451)
+|++++|.+ +.+.++||+++|+|||+++++++.+++++....
T Consensus 406 ~Gl~iRp~g--~~i~~~PPliit~~eid~l~~~l~~al~~~~~~ 447 (449)
T COG0161 406 RGLLIRPLG--DVIYLMPPLIITREEIDELVDALREALDETLAD 447 (449)
T ss_pred CCeEEeecC--CEEEEcCCccCCHHHHHHHHHHHHHHHHHHHhc
Confidence 999999984 689999999999999999999999999876543
No 6
>PRK05965 hypothetical protein; Provisional
Probab=100.00 E-value=2e-69 Score=548.45 Aligned_cols=368 Identities=32% Similarity=0.523 Sum_probs=318.1
Q ss_pred CceEEEeecccEEEecCCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccC--CCCCHHHHHHHHHHhhccC--C
Q 013008 80 APVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSN--MYYSIPQIELAKRLVACSF--A 155 (451)
Q Consensus 80 ~p~~~~~~~G~~l~d~~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~--~~~~~~~~~l~~~l~~~~~--~ 155 (451)
.|+++++++|+|+||.||++||||.+++++.++||+||+|.+|+.+|++++.+... .+.+++..+|+++|++..+ .
T Consensus 28 ~~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~ 107 (459)
T PRK05965 28 GVTVLASAKGATLTDASGHQLLDAFAGLWCVNVGYGQESIVEAAAEQMRELPYATGYFHFGSEPAIRLAAKLAERAPGSL 107 (459)
T ss_pred CCceEEeeeEeEEEECCCCEEEECcccHHhccCCCCCHHHHHHHHHHHHhcCCcccccccCCHHHHHHHHHHHhhCCCCc
Confidence 37899999999999999999999999999999999999999999999998765433 3457778999999999885 6
Q ss_pred CeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeC---
Q 013008 156 DRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEY--- 232 (451)
Q Consensus 156 e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 232 (451)
++|+|++||+||++.|+|+||.|++.++.+ +|.+||.++++|||++.+++++++.+.++..+.+..+++..+++
T Consensus 108 ~~v~f~~sGSEAve~AlKlAr~~~~~~g~~---~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~~~ 184 (459)
T PRK05965 108 NHVYFTLGGSDAVDSAVRFIRHYWNATGRP---SKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPYP 184 (459)
T ss_pred CEEEEeCChhHHHHHHHHHHHHHHHhcCCC---CccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEcCCCcc
Confidence 899999999999999999999997654422 47899999999999999988888766555555554455444432
Q ss_pred ------CC--------HHHHHHhcC---CCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcc
Q 013008 233 ------GN--------IEATRKLIQ---PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRT 295 (451)
Q Consensus 233 ------~d--------~~~le~~l~---~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~ 295 (451)
+| +++++++++ .+++++||+||+++++|+++++++||++|+++|++||++||+|||+|||||+
T Consensus 185 ~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRt 264 (459)
T PRK05965 185 YRNPVGDDPQAIIAASVAALRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGRT 264 (459)
T ss_pred cccccCCChHHHHHHHHHHHHHHHHhcCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhccCccC
Confidence 23 257788885 3689999999999999999999999999999999999999999999999999
Q ss_pred cccccccccCCCcceeeecccccCC-cccccccccHHHHhhccC-------CCccCCCCCcHHHHHHHHHHHHHhcChHH
Q 013008 296 GYLWAHEHYGIFPDIMTLAKPLAGG-LPIGAALVTEKVASAINY-------GDHGSTFAGSPLVCNAAIAVLDKISNPAF 367 (451)
Q Consensus 296 G~~~~~~~~~~~pdi~t~sK~lg~G-~~iG~v~~~~~i~~~~~~-------~~~~~t~~~~~~~~aaa~aal~~~~~~~~ 367 (451)
|++|+++++|+.|||+|+||+|+|| +|+|++++++++++.+.. ..+++||++||++|+|++++|++++++++
T Consensus 265 G~~~a~~~~gv~PDiv~~gKgl~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~l~~~~l 344 (459)
T PRK05965 265 GPLFACEAEGVVPDLMTVAKGLTSGYVPMGAVLMSDHVYQGIADGAGAAAPVGHGYTYSAHPVSAAVGLEVLRLYHEGGL 344 (459)
T ss_pred chhhhHhhcCCCCCeEEechhhccCCcceeEEEEcHHHHHHHhccccccccccccCCCCCCHHHHHHHHHHHHHHHhccH
Confidence 9999999999999999999999999 599999999999988753 25789999999999999999999988877
Q ss_pred HHH-----------H--HhCCCCcceecccceeEEEEecC-------------ChHHHHHHHHHCCceeeecCCCCEEEE
Q 013008 368 LAS-----------K--LARNPHVKDVRGLGLIIGIEFDV-------------SATPVVDACRDSGLLVLTAGKGNVVRL 421 (451)
Q Consensus 368 ~~~-----------~--~~~~~~~~~v~g~G~~~~~~~~~-------------~~~~~~~~l~~~Gv~~~~~~~~~~iri 421 (451)
.++ + +.++|.+.++||.|+|+++++.. ....+.+.|+++||++.+.+. +++|+
T Consensus 345 ~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gll~~~~g~-~~i~~ 423 (459)
T PRK05965 345 LANGQKAGPRFAAGLDALRAHPLVGDVRGRGLLGALELVADKATKTPFDAALDPADRIFDRAYANGLVFRAFGD-GVLGF 423 (459)
T ss_pred HHHHHHHHHHHHHHHHhhccCCCEEEEeecceEEEEEEeccccccCCCCchhHHHHHHHHHHHhCCeEEEecCC-cEEEE
Confidence 766 1 13467888999999999999821 134577888999999988765 78999
Q ss_pred eCCCCCCHHHHHHHHHHHHHHHHHHhhcCC
Q 013008 422 VPPLIISEQELDQAVEILCKTLPVLDSNSN 451 (451)
Q Consensus 422 ~~~~~~t~e~i~~~l~~l~~~l~~~~~~~~ 451 (451)
.||+++|++||++++++|+++++++.++|+
T Consensus 424 ~PpL~it~~ei~~~~~~l~~~l~~~~~~~~ 453 (459)
T PRK05965 424 APALCCTEGEFDLIFERTRKTLDDVLADPD 453 (459)
T ss_pred ECCCcCCHHHHHHHHHHHHHHHHHHhcCcc
Confidence 999999999999999999999999877764
No 7
>PRK07482 hypothetical protein; Provisional
Probab=100.00 E-value=3.2e-69 Score=547.17 Aligned_cols=364 Identities=27% Similarity=0.478 Sum_probs=316.4
Q ss_pred CceEEEeecccEEEecCCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhccccc--CCCCCHHHHHHHHHHhhccC--C
Q 013008 80 APVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVS--NMYYSIPQIELAKRLVACSF--A 155 (451)
Q Consensus 80 ~p~~~~~~~G~~l~d~~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~--~~~~~~~~~~l~~~l~~~~~--~ 155 (451)
.|+++++++|+||||.|||+||||.+++++.++||+||+|.+|+.+|++++.+.. ..+.+++..+|+++|++..+ .
T Consensus 32 ~p~~i~~a~G~~l~D~dG~~ylD~~sg~~~~~lGh~~p~v~~Av~~q~~~~~~~~~~~~~~~~~~~~lAe~L~~~~p~~~ 111 (461)
T PRK07482 32 PGRIVEGGEGIRITDAQGRRYIDAFAGLYCVNVGYGRTEVAEAIAEQAKELAYYHTYVGHGTEASITLSKRIIDRAPAGM 111 (461)
T ss_pred CCeeEEeeeeeEEEECCCCEEEEcccchhhhcCCCCCHHHHHHHHHHHHhcCccccccccCCHHHHHHHHHHHHhCCCCc
Confidence 3789999999999999999999999999999999999999999999999875432 24567889999999999885 6
Q ss_pred CeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCC--
Q 013008 156 DRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYG-- 233 (451)
Q Consensus 156 e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 233 (451)
++|+|++||+||++.|+|+||.|+..++.. +|.+||.++++|||++.+++++++...++..+.|..+++..++++
T Consensus 112 ~~v~f~~sGSEAve~AlKlAr~~~~~~g~~---~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~~~~~p~~ 188 (461)
T PRK07482 112 SKVYYGLSGSDANETQIKLVWYYNNVLGRP---EKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVLHTEAPHY 188 (461)
T ss_pred CEEEEeCchHHHHHHHHHHHHHHHHhcCCC---CCceEEEecCccCCccHhhhhccCCchhhhccCCCCCCCEEcCCCcc
Confidence 899999999999999999999997544322 478999999999999999999888766666666666665544322
Q ss_pred ----------------CHHHHHHhcC---CCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCc
Q 013008 234 ----------------NIEATRKLIQ---PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGR 294 (451)
Q Consensus 234 ----------------d~~~le~~l~---~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr 294 (451)
++++|++++. ++++++||+||+++++|+++++++|+++|+++|++||++||+|||+|||||
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tGfGR 268 (461)
T PRK07482 189 YRRADAGMSEEQFSAYCADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTGFGR 268 (461)
T ss_pred ccccccCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCc
Confidence 3578888884 367999999999999999999999999999999999999999999999999
Q ss_pred ccccccccccCCCcceeeecccccCCc-ccccccccHHHHhhccC-------CCccCCCCCcHHHHHHHHHHHHHhcChH
Q 013008 295 TGYLWAHEHYGIFPDIMTLAKPLAGGL-PIGAALVTEKVASAINY-------GDHGSTFAGSPLVCNAAIAVLDKISNPA 366 (451)
Q Consensus 295 ~G~~~~~~~~~~~pdi~t~sK~lg~G~-~iG~v~~~~~i~~~~~~-------~~~~~t~~~~~~~~aaa~aal~~~~~~~ 366 (451)
+|++|+++++|+.||++|+||+++||+ |+|++++++++++.+.. ..|++||++||++|+|++++|+++++++
T Consensus 269 tG~~~a~~~~gv~PDiv~~gKgl~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~~~~~~ 348 (461)
T PRK07482 269 LGSMFGSDHYGIEPDLITVAKGLTSAYAPLSGSIVGEKVWDVLEQGSDEHGAIGHGWTYSGHPICAAAALANLDILEREN 348 (461)
T ss_pred CcchhhHHhcCCCCCEEEEccccccCccccceeeecHHHHHHHhcccccCCccccCCCCCcCHHHHHHHHHHHHHHHhCC
Confidence 999999999999999999999999995 99999999999987752 2478999999999999999999998877
Q ss_pred HHHH--------------HHhCCCCcceecccceeEEEEecC--C-----------hHHHHHHHHHCCceeeecCCCCEE
Q 013008 367 FLAS--------------KLARNPHVKDVRGLGLIIGIEFDV--S-----------ATPVVDACRDSGLLVLTAGKGNVV 419 (451)
Q Consensus 367 ~~~~--------------~~~~~~~~~~v~g~G~~~~~~~~~--~-----------~~~~~~~l~~~Gv~~~~~~~~~~i 419 (451)
+.++ +.+++|.+.++||.|+|+++++.. . ...++..|+++||++.+...++++
T Consensus 349 l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~~~~~~i 428 (461)
T PRK07482 349 LVGNAAEVGAYFRARLRAAFGDHPLVGEVRGVGMLAAVEFVADRDDRTPFDPALKIGPQVSAAALERGVIARAMPHGDIL 428 (461)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCEEEEeeceeEEEEEeccCCCcCCCCChhhHHHHHHHHHHHHCCcEEecCCCCCEE
Confidence 7666 345678889999999999999931 0 246788899999998654224789
Q ss_pred EEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 013008 420 RLVPPLIISEQELDQAVEILCKTLPVL 446 (451)
Q Consensus 420 ri~~~~~~t~e~i~~~l~~l~~~l~~~ 446 (451)
|+.||+++|++||++++++|+++++++
T Consensus 429 ~~~Ppl~it~~ei~~~~~~l~~~l~~~ 455 (461)
T PRK07482 429 GFAPPLVLTRAEADEIVAIAKDAVDEV 455 (461)
T ss_pred EEeCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999876
No 8
>PRK07678 aminotransferase; Validated
Probab=100.00 E-value=1.5e-68 Score=541.46 Aligned_cols=384 Identities=33% Similarity=0.582 Sum_probs=324.5
Q ss_pred chHHHHHHHHhccccc---CCC-CceEEEeecccEEEecCCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccCC
Q 013008 61 NNKEVMEAEKKLLVGT---YNR-APVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNM 136 (451)
Q Consensus 61 ~~~~~~~~~~~~~~~~---~~~-~p~~~~~~~G~~l~d~~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~ 136 (451)
++.++++++.++.++. +.+ .|+++++++|+|+||.|||+||||.+++++.+|||+||+|.+|+.+|++++.+....
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~ 85 (451)
T PRK07678 6 QTDELLAKDEQYVWHGMKPYNPNATMVVAKAEGAWVTDIQGNRYLDGMSGLWCVNVGYGRKELAEAAYEQLKTLSYFPLT 85 (451)
T ss_pred CHHHHHHHhhcccCCCccccccCCCeeEEeeeeeEEEeCCCCEEEEccccHHhhcCCCCCHHHHHHHHHHHHhcCccccc
Confidence 3444444444444333 222 389999999999999999999999999999999999999999999999987655444
Q ss_pred CCCHHHHHHHHHHhhccC-CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCC
Q 013008 137 YYSIPQIELAKRLVACSF-ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEH 215 (451)
Q Consensus 137 ~~~~~~~~l~~~l~~~~~-~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~ 215 (451)
+.++...+|+++|++..+ .++++|++||+||++.|+|+||.||+.++.+ +|.+||.++++|||++.+++++++...
T Consensus 86 ~~~~~~~~lae~l~~~~~~~~~v~f~~sGseA~e~AlklAr~~t~~~g~~---~r~~ii~~~~~yHG~t~~als~~~~~~ 162 (451)
T PRK07678 86 QSHEPAIKLAEKLNEWLGGEYVIFFSNSGSEANETAFKIARQYHAQKGEP---HRYKFISRYRAYHGNSMGALAATGQAQ 162 (451)
T ss_pred cCCHHHHHHHHHHHHhCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCC---CCcEEEEECCCcCCccHHHhhcCCCcc
Confidence 567789999999999886 5699999999999999999999998654432 478999999999999999999887766
Q ss_pred cCCCCcCCCCCeeEeeCCC-----------------HHHHHHhcC---CCCeEEEEEccccCCCCccccCHHHHHHHHHH
Q 013008 216 YRSPFEPVMPGVNFVEYGN-----------------IEATRKLIQ---PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDA 275 (451)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~d-----------------~~~le~~l~---~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l 275 (451)
++..+.|..+++..+|+++ ++.++++++ ++++++||+||+++++|+++|+++||++|+++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~l 242 (451)
T PRK07678 163 RKYKYEPLAPGFLHVPPPDCYRMPGIESEDIYDLECVKEIDRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEI 242 (451)
T ss_pred cccccCCCCCCCEEeCCCccccccccCChHHHHHHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHH
Confidence 6666667667776655432 233666774 46899999999999999999999999999999
Q ss_pred HHHhCCEEEEeccccCCCcccccccccccCCCcceeeecccccCC-cccccccccHHHHhhccCC------CccCCCCCc
Q 013008 276 CDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAGG-LPIGAALVTEKVASAINYG------DHGSTFAGS 348 (451)
Q Consensus 276 ~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~t~sK~lg~G-~~iG~v~~~~~i~~~~~~~------~~~~t~~~~ 348 (451)
|++||++||+|||+|||||+|++|+++++|+.||++|+||+++|| +|+|++++++++++.+... .|++||++|
T Consensus 243 c~~~g~llI~DEV~tGfGRtG~~~~~~~~gv~PDivt~gK~lggG~~Pi~av~~~~~i~~~~~~~~~~~~~~h~~T~~gn 322 (451)
T PRK07678 243 CQKHGALLISDEVICGFGRTGKAFGFMNYGVKPDIITMAKGITSAYLPLSATAVKKEIYEAFKGKGEYEHFRHVNTFGGN 322 (451)
T ss_pred HHHcCCEEEEeehhhcCCcCchhHHHHhcCCCCCEEEeecccccCCcceeEEEEcHHHHHHHhccCcccccccCCCCCcC
Confidence 999999999999999999999999999999999999999999999 7999999999999988532 478999999
Q ss_pred HHHHHHHHHHHHHhcChHHHHH--------------HHhCCCCcceecccceeEEEEecC-----------ChHHHHHHH
Q 013008 349 PLVCNAAIAVLDKISNPAFLAS--------------KLARNPHVKDVRGLGLIIGIEFDV-----------SATPVVDAC 403 (451)
Q Consensus 349 ~~~~aaa~aal~~~~~~~~~~~--------------~~~~~~~~~~v~g~G~~~~~~~~~-----------~~~~~~~~l 403 (451)
|++|+|++++|++++++++.++ ++++++.+..++|.|+|+++++.. ...++...|
T Consensus 323 p~~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~l~~~~~~~~~v~~vrg~Gl~~~i~~~~~~~~~~~~~~~~a~~i~~~l 402 (451)
T PRK07678 323 PAACALALKNLEIMENENLIERSAQLGELLLEQLKEELGEHPLVGDIRGKGLLVGIELVNDKETKEPADNDKVASVVAAC 402 (451)
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEeeceEEEEEEecCCcccCcCchHHHHHHHHHH
Confidence 9999999999999988776655 235577888999999999999821 135678889
Q ss_pred HHCCceeeecCC-----CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHh
Q 013008 404 RDSGLLVLTAGK-----GNVVRLVPPLIISEQELDQAVEILCKTLPVLD 447 (451)
Q Consensus 404 ~~~Gv~~~~~~~-----~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~~ 447 (451)
+++||++.+.+. ++++||+||+++|++|||+++++|++++++++
T Consensus 403 ~~~Gv~~~~~g~~v~~~~~~lrl~Ppl~it~~eid~~~~~l~~~l~~~~ 451 (451)
T PRK07678 403 KEKGLIIGKNGDTVAGYNNVLTLSPPLVISSEEIAFIVGTLKTALERIK 451 (451)
T ss_pred HHCCcEEeecCccccCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHhcC
Confidence 999999976531 37899999999999999999999999998764
No 9
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=100.00 E-value=3.1e-68 Score=538.05 Aligned_cols=366 Identities=35% Similarity=0.570 Sum_probs=327.7
Q ss_pred CCCCceEEEeecc-cEEEecCCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHhhccC-
Q 013008 77 YNRAPVVLASGKG-CKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSF- 154 (451)
Q Consensus 77 ~~~~p~~~~~~~G-~~l~d~~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~- 154 (451)
+.+.|+++.+++| +||||.||++||||.+++++.++||+||+|.+|+.+|++++.+.+..+.++...+|+++|++..+
T Consensus 60 ~~~~~~~~~~~~G~~~l~D~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~l~~~~~~~~~~~~~~lae~L~~~~p~ 139 (459)
T PRK11522 60 GGDYGAVEWQAGGLNTLVDTQGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPLHSQELLDPLRAMLAKTLAALTPG 139 (459)
T ss_pred cCCCCeeEEeccCeEEEEECCCCEEEECCcCHHhhhcCCCCHHHHHHHHHHHhhCcccccccCCHHHHHHHHHHHHhCCC
Confidence 3466889999999 99999999999999999999999999999999999999987665555668889999999999875
Q ss_pred -CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCC
Q 013008 155 -ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYG 233 (451)
Q Consensus 155 -~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (451)
.++++|++||+|||+.|+|+||.||+.+ +|.+||.++++|||++.++++.++...++.++.|..+++..+|+|
T Consensus 140 ~~~~v~f~~SGsEAve~AlklAr~~t~~~------gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~ 213 (459)
T PRK11522 140 KLKYSFFCNSGTESVEAALKLAKAYQSPR------GKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFG 213 (459)
T ss_pred CCCEEEEeCCchHHHHHHHHHHHHHhccC------CCcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcccCCC
Confidence 6799999999999999999999998532 266899999999999999999988777777777888889999999
Q ss_pred CHHHHHHhcC-----CCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccccccCCCc
Q 013008 234 NIEATRKLIQ-----PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFP 308 (451)
Q Consensus 234 d~~~le~~l~-----~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~p 308 (451)
|+++++++++ .+++++||+||+++++|+++|+++||++|+++|++||+++|+|||||||||+|.+|+++++|+.|
T Consensus 214 d~~~l~~~l~~~~~~~~~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv~P 293 (459)
T PRK11522 214 NIEAMRTALSECKKTGDDVAAVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRTGKMFACEHENVQP 293 (459)
T ss_pred CHHHHHHHHHHhhccCCcEEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceecCCccchhhhhhccCCCC
Confidence 9999999885 25799999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeecccccCC-cccccccccHHHHhhcc--CCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH--------------H
Q 013008 309 DIMTLAKPLAGG-LPIGAALVTEKVASAIN--YGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS--------------K 371 (451)
Q Consensus 309 di~t~sK~lg~G-~~iG~v~~~~~i~~~~~--~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~--------------~ 371 (451)
|++|+||++||| +|+|++++++++++.+. +..+++||++||++|+|++++|++++++++.++ +
T Consensus 294 Divt~gK~lggG~~Pigav~~~~~i~~~~~~~~~~~~~T~~gnp~~~Aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l 373 (459)
T PRK11522 294 DILCLAKALGGGVMPIGATIATEEVFSVLFDNPFLHTTTFGGNPLACAAALATINVLLEQNLPAQAEQKGDYLLDGFRQL 373 (459)
T ss_pred CEEEechhhhCCCccceeEEEcHHHHHHhccCCcccCCCCCCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHH
Confidence 999999999999 79999999999998874 346889999999999999999999988877766 3
Q ss_pred HhCCC-CcceecccceeEEEEecC--ChHHHHHHHHHCCceeeecCC-CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHh
Q 013008 372 LARNP-HVKDVRGLGLIIGIEFDV--SATPVVDACRDSGLLVLTAGK-GNVVRLVPPLIISEQELDQAVEILCKTLPVLD 447 (451)
Q Consensus 372 ~~~~~-~~~~v~g~G~~~~~~~~~--~~~~~~~~l~~~Gv~~~~~~~-~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~~ 447 (451)
.+++| .+.+++|.|+|+++++.. ....+.+.|+++||++.+.+. ++++||.||+++|++||++++++|+++++++.
T Consensus 374 ~~~~~~~i~~VrG~Gl~~giel~~~~~~~~i~~~l~~~Gvl~~~~~~~~~~lr~~Ppl~~t~~~id~~l~~l~~~l~~~~ 453 (459)
T PRK11522 374 AREYPDLVQEARGKGMLMAIEFVDNEIGYNFASEMFRQRVLVAGTLNNAKTIRIEPPLTLTIEQCEQVLKAARKALAAMR 453 (459)
T ss_pred HHhCCCceeeEEeceeEEEEEecCchHHHHHHHHHHHCCeEEEecCCCCCEEEEECCccCCHHHHHHHHHHHHHHHHHHH
Confidence 34677 678999999999999943 356788999999999987632 37899999999999999999999999998875
Q ss_pred h
Q 013008 448 S 448 (451)
Q Consensus 448 ~ 448 (451)
.
T Consensus 454 ~ 454 (459)
T PRK11522 454 V 454 (459)
T ss_pred H
Confidence 3
No 10
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=7.2e-68 Score=535.65 Aligned_cols=363 Identities=33% Similarity=0.548 Sum_probs=317.8
Q ss_pred CceEEEeecccEEEecCCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccC-CCCCHHHHHHHHHHhhccC--CC
Q 013008 80 APVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSN-MYYSIPQIELAKRLVACSF--AD 156 (451)
Q Consensus 80 ~p~~~~~~~G~~l~d~~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~~--~e 156 (451)
.|+++++++|++|||.||++||||.+++++.+|||+||+|.+|+.+|++++.+... .+.++...+|+++|++..+ .+
T Consensus 36 ~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~lAe~L~~~~p~~~~ 115 (453)
T PRK06943 36 PLLPVARGEGAWLYDRDGRRYLDAISSWWVNLFGHANPRINAALKDQLDTLEHAMLAGCTHEPAIELAERLAALTGGTLG 115 (453)
T ss_pred CCceEEecccCEEEeCCCCEEEEcchHHHHhcCCCCCHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHHhCCCCCC
Confidence 47899999999999999999999999999999999999999999999998765433 4567789999999999886 57
Q ss_pred eEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCC--
Q 013008 157 RVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGN-- 234 (451)
Q Consensus 157 ~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-- 234 (451)
+|+|++||+||++.|+|+|+.|+..++.. +|.+||.++++|||++.+++++++...++..|.|..+++.++++++
T Consensus 116 ~v~f~~sGseAve~AlKlA~~~~~~rg~~---~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~p~~~ 192 (453)
T PRK06943 116 HAFFASDGASAVEIALKMSFHAWRNRGRG---DKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPDAR 192 (453)
T ss_pred EEEEeCCCHHHHHHHHHHHHHHHHHhCCC---CCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEEECCCCcc
Confidence 99999999999999999999887544332 4789999999999999999999987766766767666665555433
Q ss_pred ---------------HHHHHHhcC--CCCeEEEEEcc-ccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCccc
Q 013008 235 ---------------IEATRKLIQ--PGKTAAVFVEP-IQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTG 296 (451)
Q Consensus 235 ---------------~~~le~~l~--~~~~aavi~ep-~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G 296 (451)
+++++++++ .+++++||+|| +++++|+++++++||++|+++|++||++||+|||+|||||+|
T Consensus 193 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~GRtG 272 (453)
T PRK06943 193 GARPGETAADVAARALADVRRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGCGRTG 272 (453)
T ss_pred ccccCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCCCc
Confidence 577888885 46899999999 599999999999999999999999999999999999999999
Q ss_pred ccccccccCCCcceeeecccccCC-cccccccccHHHHhhccCC------CccCCCCCcHHHHHHHHHHHHHhcChHHHH
Q 013008 297 YLWAHEHYGIFPDIMTLAKPLAGG-LPIGAALVTEKVASAINYG------DHGSTFAGSPLVCNAAIAVLDKISNPAFLA 369 (451)
Q Consensus 297 ~~~~~~~~~~~pdi~t~sK~lg~G-~~iG~v~~~~~i~~~~~~~------~~~~t~~~~~~~~aaa~aal~~~~~~~~~~ 369 (451)
++|+++++|+.||++|+||+++|| +|+|++++++++++.+... .+++||++||++|++++++|++++++++++
T Consensus 273 ~~fa~~~~gv~PDivt~gKgl~gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~i~~~~l~~ 352 (453)
T PRK06943 273 TFFACEQAGVWPDFLCLSKGISGGYLPLSLVLSRDAIFAAFYDDDVTRGFLHSHSYTGNPLACRAALATLDLFAEDDVLA 352 (453)
T ss_pred chhHHHhCCCCCCeEeeehhhccCcccceEEEEcHHHHHhhcccCccCCccCCCCCCCCHHHHHHHHHHHHHHHhcCHHH
Confidence 999999999999999999999999 6999999999999987531 478899999999999999999998887766
Q ss_pred H-----------H--HhCCCCcceecccceeEEEEecC--C-----hHHHHHHHHHCCceeeecCCCCEEEEeCCCCCCH
Q 013008 370 S-----------K--LARNPHVKDVRGLGLIIGIEFDV--S-----ATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISE 429 (451)
Q Consensus 370 ~-----------~--~~~~~~~~~v~g~G~~~~~~~~~--~-----~~~~~~~l~~~Gv~~~~~~~~~~iri~~~~~~t~ 429 (451)
+ + +.+++.+.++||.|+|+++++.. . ..++.+.|+++||++.+.+ +.+||+||+++|+
T Consensus 353 ~~~~~G~~l~~~L~~l~~~~~v~~vrG~Gl~~gvel~~~~~~~~~~~~~i~~~~~~~Gll~~~~g--~~l~~~Ppl~it~ 430 (453)
T PRK06943 353 RNARKSARLRAALAPLAAHPQVRHLRQRGTIFAFDVALDGDAARTFSRRFFEAALERELLLRPIG--TTVYLMPPYVLDD 430 (453)
T ss_pred HHHHHHHHHHHHHHHHhcCCCEEeEeccccEEEEEEccCCCcchHHHHHHHHHHHHCCcEEEecC--CEEEEeCCCcCCH
Confidence 6 1 13467788999999999999941 1 3467888999999998764 5799999999999
Q ss_pred HHHHHHHHHHHHHHHHHh
Q 013008 430 QELDQAVEILCKTLPVLD 447 (451)
Q Consensus 430 e~i~~~l~~l~~~l~~~~ 447 (451)
+|||+++++|+++++++-
T Consensus 431 ~eid~~~~~l~~al~~~~ 448 (453)
T PRK06943 431 DEIAWLAERTRATLDATL 448 (453)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999999998864
No 11
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=1.4e-67 Score=534.46 Aligned_cols=361 Identities=31% Similarity=0.558 Sum_probs=315.9
Q ss_pred ceEEEeecccEEEecCCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccC-CCCCHHHHHHHHHHhhccC-----
Q 013008 81 PVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSN-MYYSIPQIELAKRLVACSF----- 154 (451)
Q Consensus 81 p~~~~~~~G~~l~d~~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~~----- 154 (451)
|+.+++++|+||||.||++||||.+++++.++||+||+|.+|+.+|++++.+.+. .+.+++..+|+++|++..+
T Consensus 47 ~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~l~~~~~~~~~~~~~~~lae~L~~~~p~~~~~ 126 (472)
T PRK08742 47 LVPIARGEGAWLVGHDGRRYLDAVSSWWTNLFGHAEPRIGAAIAAQAGELEQVMLAGFTHEPAVQLAEQLLAIAPRQDGR 126 (472)
T ss_pred CeeEEecccCEEEeCCCCEEEEcCccHHhccCCCCCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCCCcccC
Confidence 4678999999999999999999999999999999999999999999988765433 3567789999999999875
Q ss_pred --CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeC
Q 013008 155 --ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEY 232 (451)
Q Consensus 155 --~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (451)
.++|+|++||+|||+.|+|+||.|+..++.. +|.+||.++++|||++.+++++++.+.++..+.|..+++.++|+
T Consensus 127 ~~~~~v~f~~sGSEAvE~AlKlAr~~~~~~g~~---~r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~~~~~~~~~ 203 (472)
T PRK08742 127 APLSKVFYADNGSAGVEVALKMAFHYFHNRGEH---RRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLFAPS 203 (472)
T ss_pred CCCCEEEEeCCchHHHHHHHHHHHHHHHhcCCC---CCcEEEEECCCcCCCchhhhhccCCcccccccCCCCCCCEEeCC
Confidence 3699999999999999999999997654432 47899999999999999999998876666667777677777766
Q ss_pred CC-----------------HHHHHHhcC--CCCeEEEEEcc-ccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCC
Q 013008 233 GN-----------------IEATRKLIQ--PGKTAAVFVEP-IQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGL 292 (451)
Q Consensus 233 ~d-----------------~~~le~~l~--~~~~aavi~ep-~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~ 292 (451)
++ ++.++++++ .+++++||+|| +++++|+++++++||++|+++|++||++||+|||+|||
T Consensus 204 p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~TGf 283 (472)
T PRK08742 204 PDAYLAEPGQSAEDYALQAADALQALFEQSPGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIATGF 283 (472)
T ss_pred CCccccccCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCC
Confidence 43 466777775 46899999999 69999999999999999999999999999999999999
Q ss_pred CcccccccccccCCCcceeeecccccCC-cccccccccHHHHhhccC------CCccCCCCCcHHHHHHHHHHHHHhcCh
Q 013008 293 GRTGYLWAHEHYGIFPDIMTLAKPLAGG-LPIGAALVTEKVASAINY------GDHGSTFAGSPLVCNAAIAVLDKISNP 365 (451)
Q Consensus 293 gr~G~~~~~~~~~~~pdi~t~sK~lg~G-~~iG~v~~~~~i~~~~~~------~~~~~t~~~~~~~~aaa~aal~~~~~~ 365 (451)
||+|++|+++++|+.||++|+||+++|| +|+|++++++++++.+.. ..|++||++||++|+|++++|++++++
T Consensus 284 GRtG~~~a~e~~gv~PDiv~~gKgl~gG~~Plaav~~~~ei~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~i~~~ 363 (472)
T PRK08742 284 GRTGTLFACEQAGVMPDLLCLSKGLTGGFLPLSAVLATQQLYDAFLDDSRERAFLHSHSYTGNPLACAAALATLDIFADD 363 (472)
T ss_pred CCCccchHHHhcCCCCCEEEEcccccCCCCCcceeeccHHHHHHhhccCccCccCcCCCCCccHHHHHHHHHHHHHHHHC
Confidence 9999999999999999999999999999 599999999999988742 247899999999999999999999888
Q ss_pred HHHHH-------------HHhCCCCcceecccceeEEEEecC--C-----------hHHHHHHHHHCCceeeecCCCCEE
Q 013008 366 AFLAS-------------KLARNPHVKDVRGLGLIIGIEFDV--S-----------ATPVVDACRDSGLLVLTAGKGNVV 419 (451)
Q Consensus 366 ~~~~~-------------~~~~~~~~~~v~g~G~~~~~~~~~--~-----------~~~~~~~l~~~Gv~~~~~~~~~~i 419 (451)
++.++ .++++|.+.++||.|+++++++.. . ...+.+.|+++||++.+.+ +++
T Consensus 364 ~l~~~~~~~g~~l~~~~~~~~~~~~i~dvRG~Gl~~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~g--~vi 441 (472)
T PRK08742 364 DVIARNQPTAARMTQLAAQIGEHPHVADVRQAGMVVAFELTRGGNKRTPFPPAARVGLHAYRAALARGVVLRPLG--DVL 441 (472)
T ss_pred CHHHHHHHHHHHHHHHHHHHhcCCCeeeEeccceEEEEEeccCccccccCCchhHHHHHHHHHHHHCCeEEEecC--CEE
Confidence 77665 234578889999999999999931 1 1457788899999998864 789
Q ss_pred EEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 013008 420 RLVPPLIISEQELDQAVEILCKTLPVL 446 (451)
Q Consensus 420 ri~~~~~~t~e~i~~~l~~l~~~l~~~ 446 (451)
||.||+++|++||++++++|+++++++
T Consensus 442 ~~~PpL~it~~ei~~~~~~l~~~l~~~ 468 (472)
T PRK08742 442 YWMPPYCVDEAQLALLADTTRHAIDEA 468 (472)
T ss_pred EEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999875
No 12
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=100.00 E-value=1.7e-68 Score=496.89 Aligned_cols=354 Identities=37% Similarity=0.646 Sum_probs=312.5
Q ss_pred CCCCceEEEeecccEEEecCCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHhhccC--
Q 013008 77 YNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSF-- 154 (451)
Q Consensus 77 ~~~~p~~~~~~~G~~l~d~~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-- 154 (451)
+...|+++++++|.||+|.+|++|+|+.+|..+..+|||||+|.+|+.+|+..+.|.+..+.+++..+|+++|.+.++
T Consensus 29 ~~~~Pl~Iv~~~~~ylyDe~G~ryLD~f~Gi~tvslGHchP~v~~a~~kQl~~l~H~t~~~~~~pi~~~Ae~L~s~~P~~ 108 (442)
T KOG1404|consen 29 YYKKPLVIVRGEGQYLYDEEGRRYLDAFGGIVTVSLGHCHPDVVAAAVKQLKKLYHTTSGYLNPPIHDLAEALVSKLPGD 108 (442)
T ss_pred cccCCceEEecceEEEEcCCCceeehhhCCeEEEEcCCCChHHHHHHHHhhhhhEEeeccccCCcHHHHHHHHHHhCCCC
Confidence 345699999999999999999999999999999999999999999999999988888778888899999999999986
Q ss_pred CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCee------
Q 013008 155 ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVN------ 228 (451)
Q Consensus 155 ~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~------ 228 (451)
...++|+|||+|||++|+++++.||+ .-+||.+..+|||.+..++++++...++..+....+++.
T Consensus 109 l~~vfF~nsGsEANelal~mar~Yt~---------~~diIa~r~~YHG~t~~t~glt~~~~~k~~~~~~~~~~~~~~~Pd 179 (442)
T KOG1404|consen 109 LKVVFFVNSGSEANELALKMARLYTG---------NLDIIARRNSYHGNTLYTLGLTGLSPWKQNFPGVASGVHHTMNPD 179 (442)
T ss_pred ceEEEEecCCchHHHHHHHHHHHhcC---------CceEEEeeccccCCchhhcccccCCcccccCCCCCCcccccCCCC
Confidence 77999999999999999999999996 678999999999999999999987766654432222332
Q ss_pred --EeeCCC----------HHHHHHhcC---CCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCC
Q 013008 229 --FVEYGN----------IEATRKLIQ---PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLG 293 (451)
Q Consensus 229 --~~~~~d----------~~~le~~l~---~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~g 293 (451)
.-++.+ .+.|++.+. ++++|++|+||++|.+|++.++++||+++.++|+++|.++|.||||||||
T Consensus 180 p~r~~~~~~~~~e~~d~~a~~l~d~i~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtGfG 259 (442)
T KOG1404|consen 180 PYRGIFGGSNEEEASDRYAKELEDLILYDGPETVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQTGFG 259 (442)
T ss_pred cccccCCCCchhhhHHHHHHHHHHHHHhcCCCceeEEEeehhccCCccccCCchHHHHHHHHHHHcCCEEEehhhhhccc
Confidence 222221 355666665 56799999999999999999999999999999999999999999999999
Q ss_pred cccccccccccCCCcceeeecccccCCcccccccccHHHHhhccCCC-ccCCCCCcHHHHHHHHHHHHHhcChHHHHH--
Q 013008 294 RTGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINYGD-HGSTFAGSPLVCNAAIAVLDKISNPAFLAS-- 370 (451)
Q Consensus 294 r~G~~~~~~~~~~~pdi~t~sK~lg~G~~iG~v~~~~~i~~~~~~~~-~~~t~~~~~~~~aaa~aal~~~~~~~~~~~-- 370 (451)
|+|.+|+++..++.|||+|++|++|+|+|+|+|+.++||++.+.+.. +..||++||++|++++++|++++++++.++
T Consensus 260 RtG~~wgfe~h~v~PDIvTmAKgiGnG~Pl~AVvtt~EIa~v~~~~~~~fnTyggnP~a~avg~aVL~Vikee~LqE~aa 339 (442)
T KOG1404|consen 260 RTGHMWGFESHGVVPDIVTMAKGIGNGFPLGAVVTTPEIADVLNQKSSHFNTYGGNPVACAVGLAVLKVIKEENLQENAA 339 (442)
T ss_pred cccccccccccCCCccHHHHHhhccCCCcceeeecCHHHHHHHHhccccccccCCCchhHHHHHHHHHHHHHHhHHHHHH
Confidence 99999999999999999999999999999999999999999997655 889999999999999999999999988877
Q ss_pred ------------HHhCCCCcceecccceeEEEEe-c-C---------ChHHHHHHHHHCCceeeecCC-CCEEEEeCCCC
Q 013008 371 ------------KLARNPHVKDVRGLGLIIGIEF-D-V---------SATPVVDACRDSGLLVLTAGK-GNVVRLVPPLI 426 (451)
Q Consensus 371 ------------~~~~~~~~~~v~g~G~~~~~~~-~-~---------~~~~~~~~l~~~Gv~~~~~~~-~~~iri~~~~~ 426 (451)
+.+++|.+.++||+|+|+++++ + . ....+.+.|.+.|+++.-++- |+++||.||++
T Consensus 340 ~vG~yl~~~l~~l~d~h~iIGdVRG~GLm~GvE~V~dk~~~~pp~~~~~~~i~~~cke~Gvlvg~g~i~G~vfriaPPlc 419 (442)
T KOG1404|consen 340 EVGSYLLEKLAALKDKHPIIGDVRGRGLMLGVELVSDKSEPKPPATAEGAVIGEQCKELGVLVGKGGIHGNVFRIAPPLC 419 (442)
T ss_pred HHHHHHHHHHHHHhhcCCceeecccceeEEEEEEecccCCCCCcchHHHHHHHHHHHHhCeeeecccccceEEEecCCee
Confidence 4578899999999999999998 2 1 124578899999999976653 78999999999
Q ss_pred CCHHHHHHHHHHH
Q 013008 427 ISEQELDQAVEIL 439 (451)
Q Consensus 427 ~t~e~i~~~l~~l 439 (451)
+|+||++.+++..
T Consensus 420 iT~edi~f~~~~~ 432 (442)
T KOG1404|consen 420 ITKEDIDFAVEYF 432 (442)
T ss_pred ccHHHHHHHHHHH
Confidence 9999998887766
No 13
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=100.00 E-value=4.9e-68 Score=533.00 Aligned_cols=357 Identities=36% Similarity=0.592 Sum_probs=316.9
Q ss_pred ceEEEeecccEEEecCCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHhhccC--CCeE
Q 013008 81 PVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSF--ADRV 158 (451)
Q Consensus 81 p~~~~~~~G~~l~d~~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~e~v 158 (451)
++++++++|+|+||.||++||||.+++++.++||+||+|.+|+.+|++++.+.+....++...+|+++|++..+ .+++
T Consensus 58 ~~~~~~~~g~~l~D~dG~~ylD~~~g~~~~~lGh~hp~v~~Av~~ql~~l~~~~~~~~~~~~~~lAe~L~~~~p~~~~~v 137 (442)
T TIGR03372 58 AVEWQAGGLNTLIDTQGNEFIDCLGGFGIFNVGHRNPNVIAAVENQLAKQPLHSQELLDPLRALLAKTLAALTPGKLKYS 137 (442)
T ss_pred eeEEEeCCeeEEEECCCCEEEECCccHHhhhcCCCCHHHHHHHHHHHHhCCCcccccCCHHHHHHHHHHHHhCCCCcCEE
Confidence 44556777799999999999999999999999999999999999999987665555667889999999999886 5789
Q ss_pred EecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHH
Q 013008 159 FFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEAT 238 (451)
Q Consensus 159 ~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l 238 (451)
+|++||+|||+.|+|+||.||..+ ++.+||.++++|||++.+++++++.+.++..+.|..+++..+|++|++.+
T Consensus 138 ~f~~SGsEA~e~AlklAr~~t~~~------gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~~d~~~~ 211 (442)
T TIGR03372 138 FFCNSGTESVEAALKLAKAYQSPR------GKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAFGDIEAM 211 (442)
T ss_pred EEeCCchHHHHHHHHHHHHHHhhc------CCcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeCCCCHHHH
Confidence 999999999999999999997421 37789999999999999999998876666677788889999999999998
Q ss_pred HHhcC-----CCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccccccCCCcceeee
Q 013008 239 RKLIQ-----PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTL 313 (451)
Q Consensus 239 e~~l~-----~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~t~ 313 (451)
++.++ .+++++||+||+++++|+++|+++||++|+++|++||+++|+|||||||||+|.+|+++++|+.||++|+
T Consensus 212 ~~~l~~~~~~~~~vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv~PDivt~ 291 (442)
T TIGR03372 212 LKALNECKKTGDDVAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRTGKMFACEHEGVQPDILCL 291 (442)
T ss_pred HHHHHHHhcCCCcEEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccCCCccccchhhhhcCCCCCeeee
Confidence 88774 3579999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCC-cccccccccHHHHhhcc--CCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH--------------HHhCCC
Q 013008 314 AKPLAGG-LPIGAALVTEKVASAIN--YGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS--------------KLARNP 376 (451)
Q Consensus 314 sK~lg~G-~~iG~v~~~~~i~~~~~--~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~--------------~~~~~~ 376 (451)
||++++| +|+|++++++++++.+. +..+++||++||++|+|++++|++++++++.++ +.+++|
T Consensus 292 gK~lg~G~~Pigavv~~~~i~~~~~~~~~~~~~T~~gnp~~~Aaa~a~L~~i~~~~l~~~~~~~G~~l~~~L~~l~~~~~ 371 (442)
T TIGR03372 292 AKALGGGVMPIGATIATEAVFSVLFDNPFLHTTTFGGNPLACAAALATINELLEKNLPAQAAIKGDFLLDGFQQLAAEYP 371 (442)
T ss_pred hhhhcCCcccceEEEecHHHHHhhhccCccccCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999 79999999999999883 346789999999999999999999987776654 335677
Q ss_pred -CcceecccceeEEEEecC--ChHHHHHHHHHCCceeeecCC-CCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 013008 377 -HVKDVRGLGLIIGIEFDV--SATPVVDACRDSGLLVLTAGK-GNVVRLVPPLIISEQELDQAVEILCKTL 443 (451)
Q Consensus 377 -~~~~v~g~G~~~~~~~~~--~~~~~~~~l~~~Gv~~~~~~~-~~~iri~~~~~~t~e~i~~~l~~l~~~l 443 (451)
.+.++||.|+|+++++.. ....+++.|+++||++.+.+. ++++||.||+++|++|+|+++++|++++
T Consensus 372 ~~i~~vRG~Gl~~giel~~~~~~~~i~~~l~~~Gvl~~~~~~~~~~lr~~Ppl~~t~~~id~~~~~l~~~~ 442 (442)
T TIGR03372 372 DLIIEARGKGLLMAIEFRDNEIGYAFAKELFQQNILVAGTLNNAKSIRIEPPLTITIEQCALVIKAAKDAL 442 (442)
T ss_pred CceEEEecceEEEEEEeCChHHHHHHHHHHHHCCcEEeecCCCCCEEEEECCcccCHHHHHHHHHHHHHhC
Confidence 678999999999999943 356789999999999986533 3789999999999999999999999864
No 14
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=100.00 E-value=1.9e-67 Score=533.59 Aligned_cols=373 Identities=32% Similarity=0.541 Sum_probs=317.5
Q ss_pred HHHHHHHhc--ccccCC-CCceEEEeecccEEEecCCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcc-cccCCCCC
Q 013008 64 EVMEAEKKL--LVGTYN-RAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLT-HVSNMYYS 139 (451)
Q Consensus 64 ~~~~~~~~~--~~~~~~-~~p~~~~~~~G~~l~d~~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~-~~~~~~~~ 139 (451)
+++++..++ ..+.|. +.|+++++++|+||||.||++||||.+++++.++||+||+|.+|+.+|+++.. +....+.+
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~ 105 (464)
T PRK06938 26 PLLERQSRRESNARSYPRRIPLALKRARGIYVEDVEGRQFIDCLAGAGTLALGHNHPVVIEAIQQVLADELPLHTLDLTT 105 (464)
T ss_pred HHHHHHHhhhhhccccccCCCceEEeccccEEEeCCCCEEEEccCCccccccCCCCHHHHHHHHHHHHhhhcccccccCC
Confidence 444443322 334442 57899999999999999999999999999999999999999999999997533 22224567
Q ss_pred HHHHHHHHHHhhccCC-----CeEEec-CCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCC
Q 013008 140 IPQIELAKRLVACSFA-----DRVFFS-NTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK 213 (451)
Q Consensus 140 ~~~~~l~~~l~~~~~~-----e~v~~~-~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~ 213 (451)
+...+|+++|.+..+. ++++|+ +||+||++.|+|+||.+|+ |.+||.++++|||++.+++++++.
T Consensus 106 ~~~~~la~~L~~~~p~~~~~~~~v~f~~~SGSEAve~AlklAr~~tg---------r~~ii~~~~~yHG~t~~als~t~~ 176 (464)
T PRK06938 106 PVKDQFVQDLFASLPEAFAREAKIQFCGPTGTDAVEAALKLVKTATG---------RSTVLSFQGGYHGMSQGALSLMGN 176 (464)
T ss_pred HHHHHHHHHHHHhCcccccccceEEEeCCCcHHHHHHHHHHHHHhhC---------CCeEEEECCccCCccHHHHhhcCC
Confidence 7789999999988752 367776 7999999999999999874 889999999999999999998876
Q ss_pred CCcCCCCcCCCCCeeEeeCC-----------------CHHHHHHhcCC-----CCeEEEEEccccCCCCccccCHHHHHH
Q 013008 214 EHYRSPFEPVMPGVNFVEYG-----------------NIEATRKLIQP-----GKTAAVFVEPIQGEGGIYSATKEFLQF 271 (451)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~-----------------d~~~le~~l~~-----~~~aavi~ep~~~~~G~~~~~~~~l~~ 271 (451)
..++..+.+..+++.++|++ +++.++++++. +++++||+||+++++|.++|+++||++
T Consensus 177 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~ 256 (464)
T PRK06938 177 LGPKKPLGALLPGVQFLPYPYDYRCPFGLGGEAGVRANLHYLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRG 256 (464)
T ss_pred ccccccCCCCCCCcEEeCCCccccccccCchhhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHH
Confidence 55555566666666666543 25778888862 369999999999999999999999999
Q ss_pred HHHHHHHhCCEEEEeccccCCCcccccccccccCCCcceeeecccccCCcccccccccHHHHhhccCCCccCCCCCcHHH
Q 013008 272 LRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLV 351 (451)
Q Consensus 272 l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~t~sK~lg~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~ 351 (451)
|+++|++||++||+|||+|||||+|++|+++++|+.||++|+||+++||+|+|++++++++ +.+....+++||++||++
T Consensus 257 lr~lc~~~giLlI~DEV~tGfGRtG~~~a~e~~gv~PDiv~~gKglggG~PlsAv~~~~~~-~~~~~~~~~~T~~gnpla 335 (464)
T PRK06938 257 LRRITEEAGIPLIVDEIQSGFGRTGKMFAFEHAGIIPDVVVLSKAIGGSLPLAVVVYREWL-DTWQPGAHAGTFRGNQMA 335 (464)
T ss_pred HHHHHHHcCCEEEEeccccCCCcCcHHHHHHhcCCCCCEEEeeccccCCCceEEEeehhHh-hccCCCCCCCCCCcCHHH
Confidence 9999999999999999999999999999999999999999999999999999999999885 777666789999999999
Q ss_pred HHHHHHHHHHhcChHHHHH--------------HHhCCCCcceecccceeEEEEecCC----------------hHHHHH
Q 013008 352 CNAAIAVLDKISNPAFLAS--------------KLARNPHVKDVRGLGLIIGIEFDVS----------------ATPVVD 401 (451)
Q Consensus 352 ~aaa~aal~~~~~~~~~~~--------------~~~~~~~~~~v~g~G~~~~~~~~~~----------------~~~~~~ 401 (451)
|+|++++|++++++++.++ +.+++|.+.++||.|+|++++|..+ ...+..
T Consensus 336 ~Aaa~a~L~~l~~~~l~~~~~~~G~~l~~~L~~l~~~~~~i~~VrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (464)
T PRK06938 336 MAAGSATLRYIKEHRLAEHAAAMGERLREHLRQLQRDYPQLGDVRGRGLMLGVEIVDPQGEPDALGHPPANGELASLIQR 415 (464)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEeccCcccccccccCCccHHHHHHHHH
Confidence 9999999999988877766 4456888999999999999999311 245778
Q ss_pred HHHHCCceeeecCC-CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 013008 402 ACRDSGLLVLTAGK-GNVVRLVPPLIISEQELDQAVEILCKTLPVL 446 (451)
Q Consensus 402 ~l~~~Gv~~~~~~~-~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~ 446 (451)
.|+++|+++.+.+. ++++||.||+++|++|++++++++++++.++
T Consensus 416 ~~~~~Gll~~~~g~~~~~l~~~Ppl~it~~eid~~~~~l~~~l~~~ 461 (464)
T PRK06938 416 ECLRRGLILELGGRHGSVVRFLPPLIITAEQIDEVAEIFAEAVAAA 461 (464)
T ss_pred HHHHCCeEEeecCCCCCEEEEECCCccCHHHHHHHHHHHHHHHHHH
Confidence 88999999987653 5899999999999999999999999999865
No 15
>PRK07483 hypothetical protein; Provisional
Probab=100.00 E-value=1.5e-67 Score=532.50 Aligned_cols=370 Identities=36% Similarity=0.609 Sum_probs=318.3
Q ss_pred cCCCCceEEEeecccEEEecCCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccC-CCCCHHHHHHHHHHhhccC
Q 013008 76 TYNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSN-MYYSIPQIELAKRLVACSF 154 (451)
Q Consensus 76 ~~~~~p~~~~~~~G~~l~d~~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~~ 154 (451)
.+...|+++++++|+||||.||++||||.+++++.++||+||+|.+|+++|++++.+... .+.++...+|+++|++..+
T Consensus 8 ~~~~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~av~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p 87 (443)
T PRK07483 8 SPRATLPVAVAGEGIYLIDATGKRYLDASGGAAVSCLGHSHPRVIAAIHAQIDRLAYAHTSFFTTEPAEALADRLVAAAP 87 (443)
T ss_pred cccCCCceEEeceEEEEEeCCCCEEEEcCccHhhhccCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCC
Confidence 344579999999999999999999999999999999999999999999999998654322 3567778999999999875
Q ss_pred --CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeC
Q 013008 155 --ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEY 232 (451)
Q Consensus 155 --~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (451)
.++++|++||+||++.|+|+||.|+..++.+ +|.+||.++++|||++.+++++++...++..+.|..+++..+++
T Consensus 88 ~~~~~v~f~~sGsEAve~AlklAr~~~~~~g~~---~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~ 164 (443)
T PRK07483 88 AGLEHVYFVSGGSEAVEAALKLARQYFVEIGQP---QRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSP 164 (443)
T ss_pred CCCCEEEEcCCcHHHHHHHHHHHHHHHHhcCCC---CCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEeCC
Confidence 6899999999999999999999996544322 47889999999999999999998776666566666666655542
Q ss_pred ----CC--------------HHHHHHhcC---CCCeEEEEEccccC-CCCccccCHHHHHHHHHHHHHhCCEEEEecccc
Q 013008 233 ----GN--------------IEATRKLIQ---PGKTAAVFVEPIQG-EGGIYSATKEFLQFLRDACDDAGALLVFDEVQC 290 (451)
Q Consensus 233 ----~d--------------~~~le~~l~---~~~~aavi~ep~~~-~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t 290 (451)
++ ++++++++. .+++++||+||+++ ++|.++++++||++|+++|++||++||+|||+|
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~t 244 (443)
T PRK07483 165 CYAYREQRAGESDEAYGQRLADELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMC 244 (443)
T ss_pred CccccccccCCCHHHHHHHHHHHHHHHHHhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEeccee
Confidence 33 256777664 46899999999998 579999999999999999999999999999999
Q ss_pred CCCcccccccccccCCCcceeeecccccCCc-ccccccccHHHHhhccCC----CccCCCCCcHHHHHHHHHHHHHhcCh
Q 013008 291 GLGRTGYLWAHEHYGIFPDIMTLAKPLAGGL-PIGAALVTEKVASAINYG----DHGSTFAGSPLVCNAAIAVLDKISNP 365 (451)
Q Consensus 291 g~gr~G~~~~~~~~~~~pdi~t~sK~lg~G~-~iG~v~~~~~i~~~~~~~----~~~~t~~~~~~~~aaa~aal~~~~~~ 365 (451)
||||+|++|+++++++.|||+|+||+++||+ |+|++++++++++.+... .|++||++||++|++++++|++++++
T Consensus 245 GfGRtG~~~a~~~~gv~PDiv~~gK~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~l~~i~~~ 324 (443)
T PRK07483 245 GMGRTGTLFACEEDGVAPDLVTIAKGLGAGYQPIGAVLASDRIYDAIADGSGFFQHGHTYLGHATACAAALAVQRVIAED 324 (443)
T ss_pred CcccCcHHHHHhhcCCCCCeeeehhhhccCccccEEEEEcHHHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999995 999999999999988542 47899999999999999999999887
Q ss_pred HHHHH--------------HHhCCCCcceecccceeEEEEecC-------------ChHHHHHHHHHCCceeeecCC---
Q 013008 366 AFLAS--------------KLARNPHVKDVRGLGLIIGIEFDV-------------SATPVVDACRDSGLLVLTAGK--- 415 (451)
Q Consensus 366 ~~~~~--------------~~~~~~~~~~v~g~G~~~~~~~~~-------------~~~~~~~~l~~~Gv~~~~~~~--- 415 (451)
++.++ +++++|.+.++||.|+|+++++.. ....+.+.|+++|+++.+.+.
T Consensus 325 ~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vRG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~~~~~~ 404 (443)
T PRK07483 325 GLLANVRARGEQLRARLRERLGQHPHVGDIRGRGLFVGVELVADRATKAPFDPALKLHARIKREAMARGLMVYPMGGTID 404 (443)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhcCCCeeeEeecccEEEEEEeecccccCCCCchhhHHHHHHHHHHHCCcEEEecCcccc
Confidence 77666 345678888999999999999831 124678889999999987531
Q ss_pred ---CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHhh
Q 013008 416 ---GNVVRLVPPLIISEQELDQAVEILCKTLPVLDS 448 (451)
Q Consensus 416 ---~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~~~ 448 (451)
++++||.||+++|++|||+++++|+++++++..
T Consensus 405 ~~~~~~l~~~PpL~it~~eid~~~~~l~~~l~~~~~ 440 (443)
T PRK07483 405 GVRGDHVLLAPPFIITAAQIDEIVERLGDAIDAALA 440 (443)
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 478999999999999999999999999987653
No 16
>PRK07481 hypothetical protein; Provisional
Probab=100.00 E-value=3.6e-67 Score=531.06 Aligned_cols=363 Identities=34% Similarity=0.609 Sum_probs=314.0
Q ss_pred CceEEEeecccEEEecCCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccC--CCCCHHHHHHHHHHhhccC---
Q 013008 80 APVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSN--MYYSIPQIELAKRLVACSF--- 154 (451)
Q Consensus 80 ~p~~~~~~~G~~l~d~~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~--~~~~~~~~~l~~~l~~~~~--- 154 (451)
.|+++++++|+||||.||++||||.+++++.+|||+||+|.+|+.+|++++.+.+. .+.++...+|+++|++..+
T Consensus 24 ~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~~lae~L~~~~~~~~ 103 (449)
T PRK07481 24 PPIIIVRGDGVYVYDIDGKKLLDGVGGLWNVNVGHNREEVKEAIVRQLDELEYYSTFDGTTHPRAIELSYELIDMFAPEG 103 (449)
T ss_pred CCceEEeccccEEEeCCCCEEEECchhHHhhcCCCCCHHHHHHHHHHHHhccceecccccCCHHHHHHHHHHHHhcCCCC
Confidence 58999999999999999999999999999999999999999999999998765432 3567889999999999873
Q ss_pred CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEee---
Q 013008 155 ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVE--- 231 (451)
Q Consensus 155 ~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 231 (451)
.++++|++||+||++.|+|+||.|++..+.+ +|.+||.++++|||++.+++++++...++..+.|..+++..++
T Consensus 104 ~~~v~f~~sGsEAve~AlklAr~~~~~~g~~---~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~~~g~~~~~~~~ 180 (449)
T PRK07481 104 MRRVFFSSGGSDSVETALKLARQYWKVRGQP---ERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPW 180 (449)
T ss_pred CCEEEEcCchHHHHHHHHHHHHHHHHhcCCC---CCcEEEEECCCcCCcchhhhccCCCcccccccCCCCCCCEEeCCCc
Confidence 6799999999999999999999998654432 4789999999999999999988876666655666666665543
Q ss_pred -----CC--CHHH--------HHHhcC---CCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCC
Q 013008 232 -----YG--NIEA--------TRKLIQ---PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLG 293 (451)
Q Consensus 232 -----~~--d~~~--------le~~l~---~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~g 293 (451)
+| |.+. +|+++. ++++++||+||+++++|.++++++||++|+++|++||++||+|||+||||
T Consensus 181 ~~~~~~~~~d~~~~~~~~~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfG 260 (449)
T PRK07481 181 LYRNPFTEQDPEELARICARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFG 260 (449)
T ss_pred ccccccCCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhhCcC
Confidence 34 5444 344443 46899999999999999999999999999999999999999999999999
Q ss_pred cccccccccccCCCcceeeecccccCC-cccccccccHHHHhhccC-------CCccCCCCCcHHHHHHHHHHHHHhcCh
Q 013008 294 RTGYLWAHEHYGIFPDIMTLAKPLAGG-LPIGAALVTEKVASAINY-------GDHGSTFAGSPLVCNAAIAVLDKISNP 365 (451)
Q Consensus 294 r~G~~~~~~~~~~~pdi~t~sK~lg~G-~~iG~v~~~~~i~~~~~~-------~~~~~t~~~~~~~~aaa~aal~~~~~~ 365 (451)
|+|++|+++++++.||++|+||+++|| +|+|++++++++++.+.. ..|++||++||++|+|++++|++++++
T Consensus 261 RtG~~~a~~~~gv~PDiv~~gKgl~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~l~~~ 340 (449)
T PRK07481 261 RTGSWFGSRGWGVKPDIMCLAKGITSGYVPLGATMVNARIADAFEANADFGGAIMHGYTYSGHPVACAAALATLDIVVRE 340 (449)
T ss_pred cCchhhHhhhcCCCCCEEEEeecccCCCcCceEEEEcHHHHHHHhccCccccccccCCCCCCCHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999 699999999999998853 257899999999999999999999888
Q ss_pred HHHHH--------------HHhCCCCcceecccceeEEEEecC-------------ChHHHHHHHHHCCceeeecCCCCE
Q 013008 366 AFLAS--------------KLARNPHVKDVRGLGLIIGIEFDV-------------SATPVVDACRDSGLLVLTAGKGNV 418 (451)
Q Consensus 366 ~~~~~--------------~~~~~~~~~~v~g~G~~~~~~~~~-------------~~~~~~~~l~~~Gv~~~~~~~~~~ 418 (451)
++.++ +.+++|.+.++||.|+|+++++.. ....+...|+++||++.+.+ +.
T Consensus 341 ~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Glm~gi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~g--~~ 418 (449)
T PRK07481 341 DLPANAAKRGAYLLEGLQPLKERFELVGDVRGKGLMLALDLVADKATREPIDPSKGYANAVADVARENGVLVRPSG--TK 418 (449)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhcCCCeEEEeecceEEEEEecccccccCCCCchhHHHHHHHHHHHhCCeEEEecC--CE
Confidence 77666 345678889999999999999831 12457788899999998875 56
Q ss_pred EEEeCCCCCCHHHHHHHHHHHHHHHHHHh
Q 013008 419 VRLVPPLIISEQELDQAVEILCKTLPVLD 447 (451)
Q Consensus 419 iri~~~~~~t~e~i~~~l~~l~~~l~~~~ 447 (451)
+|++||+++|++|||+++++|+++++++.
T Consensus 419 i~l~Ppl~it~~eid~~~~~l~~~l~~~~ 447 (449)
T PRK07481 419 IILSPPLVIQREDVDRIVDALDAGLSAVP 447 (449)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHHHhcc
Confidence 89999999999999999999999998753
No 17
>PRK06062 hypothetical protein; Provisional
Probab=100.00 E-value=5.8e-67 Score=529.32 Aligned_cols=371 Identities=31% Similarity=0.573 Sum_probs=315.6
Q ss_pred HHHHHhcccccCCC----CceEEEeecccEEEecCCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHH
Q 013008 66 MEAEKKLLVGTYNR----APVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIP 141 (451)
Q Consensus 66 ~~~~~~~~~~~~~~----~p~~~~~~~G~~l~d~~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~ 141 (451)
++...++.++.|.. .|+++++++|+||||.||++||||.+++++.+|||+||+|.+|+.+|++++.+....+.++.
T Consensus 17 ~~~~~~~~~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~ 96 (451)
T PRK06062 17 YALDRAHVFHSWSAQGKINPMVIAGAEGSYVWDYEGRRYLDFSSQLVNTNIGHQHPKVVAAIQEQAARLCTVAPAHANDA 96 (451)
T ss_pred HHhhhhhccccccccccCCCceEEeceeeEEEECCCCEEEEcccCHHhhcCCCCCHHHHHHHHHHHHhcCCcCCccCCHH
Confidence 33334444444433 58999999999999999999999999999999999999999999999998766555567888
Q ss_pred HHHHHHHHhhccC--CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCC
Q 013008 142 QIELAKRLVACSF--ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSP 219 (451)
Q Consensus 142 ~~~l~~~l~~~~~--~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~ 219 (451)
..+|+++|++..+ .++|+|++||+||++.|+|+||.||+ |.+||.++++|||++.+++++++.+....
T Consensus 97 ~~~lae~L~~~~p~~~~~v~f~~SGsEAve~AlklAr~~tg---------r~~ii~~~~~yHG~t~~als~~~~~~~~~- 166 (451)
T PRK06062 97 RSEAARLIAERAPGDLSKVFFTNGGADANEHAVRMARLHTG---------RPKVLSAYRSYHGGTGSAINLTGDPRRWP- 166 (451)
T ss_pred HHHHHHHHHHhCCCCCCEEEEcCChHHHHHHHHHHHHHhhC---------CceEEEEeCCCCCCCHHHHhhcCCccccc-
Confidence 9999999999885 68999999999999999999999974 78999999999999999999886543221
Q ss_pred CcCCCCCeeEe--------eC---CC-------HHHHHHhcC---CCCeEEEEEccccCCCCccccCHHHHHHHHHHHHH
Q 013008 220 FEPVMPGVNFV--------EY---GN-------IEATRKLIQ---PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDD 278 (451)
Q Consensus 220 ~~~~~~~~~~~--------~~---~d-------~~~le~~l~---~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~ 278 (451)
..|..+++..+ ++ +| +++|+++++ ++++++||+||+++++|+++|+++||++|+++|++
T Consensus 167 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~ 246 (451)
T PRK06062 167 NDTGRAGVVHFFGPFLYRSEFHATTEEEECERALAHLERVIELEGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDR 246 (451)
T ss_pred CCCCCCCCEEeCCCCccccccCCCChHHHHHHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHH
Confidence 12333444332 12 33 677888885 36799999999999999999999999999999999
Q ss_pred hCCEEEEeccccCCCcccccccccccCCCcceeeecccccCC-cccccccccHHHHhhccCC--CccCCCCCcHHHHHHH
Q 013008 279 AGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAGG-LPIGAALVTEKVASAINYG--DHGSTFAGSPLVCNAA 355 (451)
Q Consensus 279 ~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~t~sK~lg~G-~~iG~v~~~~~i~~~~~~~--~~~~t~~~~~~~~aaa 355 (451)
||++||+|||+|||||+|.+|+++++|+.||++||||++++| +|+|++++++++++.+... .+++||++||++|+++
T Consensus 247 ~g~lLI~DEV~tGfGRtG~~~a~~~~gv~PDi~t~gK~lggG~~Pigav~~~~~i~~~~~~~~~~~~~T~~gnpl~~Aaa 326 (451)
T PRK06062 247 HGIVLIADEVMAGFGRTGKWFAIEHFGVVPDLITFAKGVNSGYVPLGGVAISEAIAATFADRPYPGGLTYSGHPLACAAA 326 (451)
T ss_pred cCCEEEeeccccCCCcCcHHHHHHhcCCCCCeeeechhhhcCCcCcEEEEEcHHHHHHhccCCCCCCCCCCCCHHHHHHH
Confidence 999999999999999999999999999999999999999999 5999999999999988643 5778999999999999
Q ss_pred HHHHHHhcChHHHHH---------------HHhCCCCcceecccceeEEEEecC----------------ChHHHHHHHH
Q 013008 356 IAVLDKISNPAFLAS---------------KLARNPHVKDVRGLGLIIGIEFDV----------------SATPVVDACR 404 (451)
Q Consensus 356 ~aal~~~~~~~~~~~---------------~~~~~~~~~~v~g~G~~~~~~~~~----------------~~~~~~~~l~ 404 (451)
+++|++++++++.++ +.+++|.+..++|.|+|+++++.. ....+.+.|+
T Consensus 327 ~a~L~~l~~~~l~~~~~~~G~~~l~~~L~~l~~~~~~v~~vrG~Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 406 (451)
T PRK06062 327 VATINAMEEEGIVENAARIGAEVLGPGLRELAERHPSVGEVRGLGVFWALELVADRETREPLAPYGASSAAMAAVKAACK 406 (451)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCCcEEeEeccccEEEEEEcccccccCCCcccchhhHHHHHHHHHHH
Confidence 999999977665543 334577788999999999999831 1346888899
Q ss_pred HCCceeeecCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHhh
Q 013008 405 DSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTLPVLDS 448 (451)
Q Consensus 405 ~~Gv~~~~~~~~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~~~ 448 (451)
++||++.+. ++.+||+||+++|++|||+++++|++++++++.
T Consensus 407 ~~Gvl~~~~--~~~lrl~ppl~~t~~eid~~~~~l~~~l~~~~~ 448 (451)
T PRK06062 407 ERGLLPFVN--GNRIHVVPPCTVTEDEVREGLAILDAALAVADA 448 (451)
T ss_pred HCCcEEeec--CCEEEEECCccCCHHHHHHHHHHHHHHHHHhhh
Confidence 999998764 378999999999999999999999999988753
No 18
>PRK06105 aminotransferase; Provisional
Probab=100.00 E-value=9.5e-67 Score=529.00 Aligned_cols=378 Identities=28% Similarity=0.494 Sum_probs=323.0
Q ss_pred HHHHHHHhcccccCC-------CCceEEEeecccEEEecCCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccC-
Q 013008 64 EVMEAEKKLLVGTYN-------RAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSN- 135 (451)
Q Consensus 64 ~~~~~~~~~~~~~~~-------~~p~~~~~~~G~~l~d~~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~- 135 (451)
.+++++.++.++++. ..|+++++++|+|+||.||++||||.+++++.++||+||+|++|+.+|++++.+...
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~ 86 (460)
T PRK06105 7 SLEARDIAYHLHPYTNARRHEEEGPLVIERGEGIYVYDDAGKRYIEGMAGLWSVALGFSEQRLVEAAARQMKKLPFYHTF 86 (460)
T ss_pred HHHHhhhhhcccCCcccccccccCCceEEeeeEEEEEECCCCEEEEcchhHHhccCCCCCHHHHHHHHHHHHhCCCeecc
Confidence 345555555555443 248999999999999999999999999999999999999999999999998754322
Q ss_pred -CCCCHHHHHHHHHHhhccC--CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccC
Q 013008 136 -MYYSIPQIELAKRLVACSF--ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTS 212 (451)
Q Consensus 136 -~~~~~~~~~l~~~l~~~~~--~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~ 212 (451)
.+.++...+|+++|++..+ .++|+|++||+||++.|+|+++.+++.++.. +|.+||.++.+|||++.+++++++
T Consensus 87 ~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseAve~AlKlar~~~~~~g~t---~r~~il~~~~~yHG~t~~a~s~t~ 163 (460)
T PRK06105 87 SHKSHGPVIDLAEKLVAMAPVPMSKVFFTNSGSEANDTVVKLVWYYNNALGRP---EKKKIISRQRGYHGVTIASASLTG 163 (460)
T ss_pred cccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCC---CCcEEEEecCccCCcchhheeccC
Confidence 3567778999999999985 5799999999999999999999887544422 478999999999999999988887
Q ss_pred CCCcCCCCcCCCCCeeEeeCCC------------------HHHHHHhcC---CCCeEEEEEccccCCCCccccCHHHHHH
Q 013008 213 KEHYRSPFEPVMPGVNFVEYGN------------------IEATRKLIQ---PGKTAAVFVEPIQGEGGIYSATKEFLQF 271 (451)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~d------------------~~~le~~l~---~~~~aavi~ep~~~~~G~~~~~~~~l~~ 271 (451)
....+..+.+..+++..+++++ ++++++++. .+++++||+||+++++|+++++++||++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~ 243 (460)
T PRK06105 164 LPNNHRSFDLPLDRILHTGCPHYYRFGLPGESEEAFATRLANELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEK 243 (460)
T ss_pred CcccccccCCCCCCCEEcCCCcccccccCCCChHHHHHHHHHHHHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHH
Confidence 6555555666556666665542 366787774 4679999999999999999999999999
Q ss_pred HHHHHHHhCCEEEEeccccCCCcccccccccccCCCcceeeecccccCC-cccccccccHHHHhhccCC-------CccC
Q 013008 272 LRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAGG-LPIGAALVTEKVASAINYG-------DHGS 343 (451)
Q Consensus 272 l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~t~sK~lg~G-~~iG~v~~~~~i~~~~~~~-------~~~~ 343 (451)
|+++|++||+++|+|||+|||||+|++|+++++++.||++|+||+++|| +|+|++++++++++.+... .|++
T Consensus 244 lr~lc~~~~~llI~DEv~tG~GRtG~~f~~~~~~v~PDi~~~gK~lggG~~P~~av~~~~~i~~~~~~~~~~~~~~~h~~ 323 (460)
T PRK06105 244 IQAVLRKYDILLVADEVICGFGRTGNMFGCETFGIKPDILVMSKQLSSSYQPLSAVLMNEKVYDPIADESGKIGTFGHGF 323 (460)
T ss_pred HHHHHHHcCCeEEEeccccCCCcCchhhhHHhcCCCCCeeeeecccccCcccceEEEEcHHHHHHHhcccccCcccccCC
Confidence 9999999999999999999999999999999999999999999999998 7999999999999987531 3788
Q ss_pred CCCCcHHHHHHHHHHHHHhcChHHHHH--------------HHhCCCCcceecccceeEEEEecCC-------------h
Q 013008 344 TFAGSPLVCNAAIAVLDKISNPAFLAS--------------KLARNPHVKDVRGLGLIIGIEFDVS-------------A 396 (451)
Q Consensus 344 t~~~~~~~~aaa~aal~~~~~~~~~~~--------------~~~~~~~~~~v~g~G~~~~~~~~~~-------------~ 396 (451)
||++||++|++++++|++++++++.++ + +++|.+.++||.|+++++++..+ +
T Consensus 324 T~~gnpl~~aaa~a~L~~i~~~~l~~~v~~~g~~l~~~L~~l-~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~a 402 (460)
T PRK06105 324 TASGHPVAAAVALENLAIIEERDLVGNAAERGARLQARLRAL-ADHPLVGEVRGVGLIAAVELVADKATKTPFEPPGKVG 402 (460)
T ss_pred CCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHh-hcCCCeEEEEecceEEEEEEecCcccCCCCCchhHHH
Confidence 999999999999999999988777666 3 56788899999999999998310 2
Q ss_pred HHHHHHHHHCCceeeecCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHh
Q 013008 397 TPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTLPVLD 447 (451)
Q Consensus 397 ~~~~~~l~~~Gv~~~~~~~~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~~ 447 (451)
..+...|+++||++.+.+ +++|++||+++|++|||+++++|++++++++
T Consensus 403 ~~i~~~~~~~Gvl~~~~g--~~i~l~Ppl~it~~eid~~~~~l~~~l~~~~ 451 (460)
T PRK06105 403 ARANAAAHEHGVISRAMG--DTLAFCPPLIITAAQVDEMVDRFGRALDDVA 451 (460)
T ss_pred HHHHHHHHHCCeEEEecC--CEEEEECCCccCHHHHHHHHHHHHHHHHHHH
Confidence 467888899999998864 7899999999999999999999999998875
No 19
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=1.3e-66 Score=527.85 Aligned_cols=361 Identities=34% Similarity=0.573 Sum_probs=316.5
Q ss_pred ceEEEeecccEEEecCCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccC-CCCCHHHHHHHHHHhhccC--CCe
Q 013008 81 PVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSN-MYYSIPQIELAKRLVACSF--ADR 157 (451)
Q Consensus 81 p~~~~~~~G~~l~d~~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~~--~e~ 157 (451)
|+.+++++|+|+||.||++||||.+++++.++||+||+|.+|+.+|++++.+.+. .+.++...+|+++|++..+ .++
T Consensus 30 ~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~~~~~~~~~~~~~~lae~L~~~~p~~~~~ 109 (466)
T PRK07030 30 LIPIRRGEGVWLEDFEGKRYLDAVSSWWVNVFGHANPRINQRIKDQVDQLEHVILAGFSHEPVIELSERLVKITPPGLSR 109 (466)
T ss_pred CceEEeeeccEEEECCCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHHhCCCCcCE
Confidence 4689999999999999999999999999999999999999999999998765433 4567889999999999875 689
Q ss_pred EEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCC---
Q 013008 158 VFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGN--- 234 (451)
Q Consensus 158 v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d--- 234 (451)
|+|++||+||++.|+|+|+.|+..++.. +|.+||.++++|||++.+++++++...++..+.|..+++..+|+++
T Consensus 110 v~f~~sGsEAve~AlKlAr~~~~~~g~t---~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~~~~~~ 186 (466)
T PRK07030 110 CFYADNGSSAIEVALKMSFHYWRNRGKP---RKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKVPSPDCYL 186 (466)
T ss_pred EEEeCCcHHHHHHHHHHHHHHHHHhCCC---CCcEEEEECCCcCcccHHHHhccCCccccccCCccCCCCEEcCCCCccc
Confidence 9999999999999999999987544432 4788999999999999999998887666666666666666665443
Q ss_pred --------------HHHHHHhcC--CCCeEEEEEcc-ccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccc
Q 013008 235 --------------IEATRKLIQ--PGKTAAVFVEP-IQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGY 297 (451)
Q Consensus 235 --------------~~~le~~l~--~~~~aavi~ep-~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~ 297 (451)
++.+++++. .+++++||+|| +++++|.++++++|+++|+++|++||++||+|||+|||||+|+
T Consensus 187 ~~~~~~~~~~~~~~l~~le~~~~~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~TGfGRtG~ 266 (466)
T PRK07030 187 RPEGMSWEEHSRRMFAHMEQTLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTGT 266 (466)
T ss_pred cccCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcccc
Confidence 566788885 46899999999 7999999999999999999999999999999999999999999
Q ss_pred cccccccCCCcceeeecccccCC-cccccccccHHHHhhccC-------CCccCCCCCcHHHHHHHHHHHHHhcChHHHH
Q 013008 298 LWAHEHYGIFPDIMTLAKPLAGG-LPIGAALVTEKVASAINY-------GDHGSTFAGSPLVCNAAIAVLDKISNPAFLA 369 (451)
Q Consensus 298 ~~~~~~~~~~pdi~t~sK~lg~G-~~iG~v~~~~~i~~~~~~-------~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~ 369 (451)
+|+++++|+.||++|+||+++|| +|+|++++++++++.+.. ..+++||++||++|+|++++|++++++++.+
T Consensus 267 ~~a~~~~gv~PDiv~~gKgl~gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~h~~T~~gnpla~aaa~a~L~~i~~~~l~~ 346 (466)
T PRK07030 267 MFACEQAGIRPDFLCLSKALTGGYLPLAAVLTTDTVYQAFYDDYPTLRAFLHSHSYTGNPLACAAALATLDIFEQDNVIE 346 (466)
T ss_pred chHHHhcCCCCCEEeeehhccCCcccceEEEecHHHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHHhcCHHH
Confidence 99999999999999999999999 599999999999988742 2588999999999999999999998887776
Q ss_pred H-------------HHhCCCCcceecccceeEEEEecC--C-----------hHHHHHHHHHCCceeeecCCCCEEEEeC
Q 013008 370 S-------------KLARNPHVKDVRGLGLIIGIEFDV--S-----------ATPVVDACRDSGLLVLTAGKGNVVRLVP 423 (451)
Q Consensus 370 ~-------------~~~~~~~~~~v~g~G~~~~~~~~~--~-----------~~~~~~~l~~~Gv~~~~~~~~~~iri~~ 423 (451)
+ .+.++|.+.++||.|+++++++.. . ..++.+.|+++|+++.+.+ +++|+.|
T Consensus 347 ~~~~~G~~l~~~L~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g--~~i~~~P 424 (466)
T PRK07030 347 NNRALARRMAEATAHLADHPHVAEVRQTGMILAIEMVQDKASKTPYPWQERRGLKVYQHALERGALLRPLG--SVVYFLP 424 (466)
T ss_pred HHHHHHHHHHHHHHHHhcCCCEEEeEeceeEEEEEeccCccccccCcchhHHHHHHHHHHHHCCeEEEecC--CEEEEEC
Confidence 6 123577888999999999999831 0 2467888999999998864 6899999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHH
Q 013008 424 PLIISEQELDQAVEILCKTLPVL 446 (451)
Q Consensus 424 ~~~~t~e~i~~~l~~l~~~l~~~ 446 (451)
|+++|++||++++++|+++++++
T Consensus 425 pl~it~~eid~~~~~l~~al~~~ 447 (466)
T PRK07030 425 PYVITPEQIDFLAEVASEGIDIA 447 (466)
T ss_pred CccCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999887
No 20
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=1.9e-66 Score=526.26 Aligned_cols=359 Identities=36% Similarity=0.590 Sum_probs=308.3
Q ss_pred CCceEEEeecccEEEecCCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccC-CCCCHHHHHHHHHHhhccC---
Q 013008 79 RAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSN-MYYSIPQIELAKRLVACSF--- 154 (451)
Q Consensus 79 ~~p~~~~~~~G~~l~d~~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~~--- 154 (451)
+.|+++++++|+||||.||++||||.+++++.+|||+||+|.+|+.+|++++.+... .+.++...+|+++|++..+
T Consensus 37 ~~p~~i~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~ 116 (443)
T PRK06058 37 TLPVYVARAGGGIVEDVDGNRLIDLGSGIAVTSVGNSAPRVVEAVREQVARFTHTCFMVTPYEGYVAVAEQLNRLTPGDH 116 (443)
T ss_pred CCCceEEeeeeeEEEeCCCCEEEEcCcchhhhccCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCC
Confidence 358999999999999999999999999999999999999999999999998654332 2456778999999999885
Q ss_pred CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCC-CCcCCCCcCCCCCeeEee--
Q 013008 155 ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK-EHYRSPFEPVMPGVNFVE-- 231 (451)
Q Consensus 155 ~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-- 231 (451)
.++++|++||+||++.|+|+||.|++ +++||.++++|||++.+++++++. ..+...+.+..+++..+|
T Consensus 117 ~~~v~f~~sGseA~e~AlklAr~~tg---------r~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (443)
T PRK06058 117 EKRSALFNSGAEAVENAVKIARSYTG---------RQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPMS 187 (443)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHHhhC---------CCeEEEECCCcCcChHHHHhhcCCCcccccccCCCCCCceEcCCC
Confidence 36999999999999999999999974 788999999999999999988753 223444445445554333
Q ss_pred --CCC---------------HHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCc
Q 013008 232 --YGN---------------IEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGR 294 (451)
Q Consensus 232 --~~d---------------~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr 294 (451)
+++ ++.+++.+..+++++||+||+++++|.++|+++||++|+++|++||+++|+|||+|||||
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iAavi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfgR 267 (443)
T PRK06058 188 YPYRDPKGLATDGEEAAARAITVIEKQVGADNLAAVIIEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFAR 267 (443)
T ss_pred cccccccccccchHHHHHHHHHHHHHhhCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCc
Confidence 222 233445555568999999999999999999999999999999999999999999999999
Q ss_pred ccccccccccCCCcceeeecccccCCcccccccccHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH----
Q 013008 295 TGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS---- 370 (451)
Q Consensus 295 ~G~~~~~~~~~~~pdi~t~sK~lg~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~---- 370 (451)
+|.+|+++++|+.||++|+||++++|+|+|++++++++++.+....+.+||++||++|+|++++|+.++++++.++
T Consensus 268 tG~~fa~~~~gv~PDiv~~gK~l~~G~Pi~av~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~~~~~~l~~~~~~~ 347 (443)
T PRK06058 268 TGAWFACEHEGIVPDLITTAKGIAGGLPLSAVTGRAEIMDAPHPGGLGGTYGGNPVACAAALAAIETIEEDDLVARARQI 347 (443)
T ss_pred ChhhhHHHhcCCCCCEEEEcccccCCCccEEEEEcHHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHH
Confidence 9999999999999999999999999999999999999999997777889999999999999999999877766655
Q ss_pred ----------HHhCCCCcceecccceeEEEEecC---------ChHHHHHHHHHCCceeeecCC-CCEEEEeCCCCCCHH
Q 013008 371 ----------KLARNPHVKDVRGLGLIIGIEFDV---------SATPVVDACRDSGLLVLTAGK-GNVVRLVPPLIISEQ 430 (451)
Q Consensus 371 ----------~~~~~~~~~~v~g~G~~~~~~~~~---------~~~~~~~~l~~~Gv~~~~~~~-~~~iri~~~~~~t~e 430 (451)
+.++++.+.+++|.|+|+++++.. ....+.+.|+++||++.+.+. ++++|+.||+++|++
T Consensus 348 g~~l~~~L~~l~~~~~~i~~vrg~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~~~~~~~~~~~lr~~Ppl~~t~~ 427 (443)
T PRK06058 348 EALMTDRLRALAAEDDRIGDVRGRGAMIAIELVKPGTTEPDAELTKALAAAAHAAGVIVLTCGTYGNVIRLLPPLVIGDE 427 (443)
T ss_pred HHHHHHHHHHHHhhCCcEEeeeccceEEEEEEecCCCCCCcHHHHHHHHHHHHHCCeEEeccCCCCCEEEEECCCccCHH
Confidence 334567888899999999999831 134577888899999987643 579999999999999
Q ss_pred HHHHHHHHHHHHHHHH
Q 013008 431 ELDQAVEILCKTLPVL 446 (451)
Q Consensus 431 ~i~~~l~~l~~~l~~~ 446 (451)
+|++++++|+++++++
T Consensus 428 ~i~~~~~~l~~~l~~~ 443 (443)
T PRK06058 428 LLREGLDVLEAALADL 443 (443)
T ss_pred HHHHHHHHHHHHHHhC
Confidence 9999999999998753
No 21
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=1.8e-66 Score=527.02 Aligned_cols=364 Identities=33% Similarity=0.579 Sum_probs=316.1
Q ss_pred CCceEEEeecccEEEecCCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccC-CCCCHHHHHHHHHHhhccC--C
Q 013008 79 RAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSN-MYYSIPQIELAKRLVACSF--A 155 (451)
Q Consensus 79 ~~p~~~~~~~G~~l~d~~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~~--~ 155 (451)
+.|+++++++|+||||.||++||||.+++++.++||+||+|.+|+.+|++++.+.+. .+.++...+|+++|++..+ .
T Consensus 37 ~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~~~~~~~~~~~~~~lae~L~~~~p~~~ 116 (460)
T PRK06916 37 EDPLIIERGEGRKLYDVNGNEYYDGVSSIWLNVHGHQVPELDEAIREQLNKIAHSTLLGLANVPSILLAEKLIEVVPEGL 116 (460)
T ss_pred CCCeeEEeccccEEEeCCCCEEEEcchhHHHhhcCCCCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCCCCC
Confidence 358999999999999999999999999999999999999999999999998765533 3567889999999999986 5
Q ss_pred CeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCC--
Q 013008 156 DRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYG-- 233 (451)
Q Consensus 156 e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 233 (451)
++++|++||+||++.|+|+||.|+..++.+ +|.+||.++++|||++.+++++++...++..+.|..+++..+|++
T Consensus 117 ~~v~f~~SGseAve~AlklAr~~~~~~g~t---gr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~p~p~~ 193 (460)
T PRK06916 117 KKVFYSDSGATAVEIAIKMAFQYWQNKGKP---KKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPYT 193 (460)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHHHhcCCC---CCcEEEEECCcCCcccHHhHhccCCcccccccCCCCCCCEEeCCCcc
Confidence 799999999999999999999987544322 578999999999999999999988766666666666666555442
Q ss_pred ---------------CHHHHHHhcC--CCCeEEEEEcc-ccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcc
Q 013008 234 ---------------NIEATRKLIQ--PGKTAAVFVEP-IQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRT 295 (451)
Q Consensus 234 ---------------d~~~le~~l~--~~~~aavi~ep-~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~ 295 (451)
+++.++++++ .+++++||+|| +++++|+++++++||++|+++|++||++||+|||+|||||+
T Consensus 194 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~TG~GRt 273 (460)
T PRK06916 194 YRSPYGNDKAEIVKKHLEELEELLKEKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVATGFGRT 273 (460)
T ss_pred cccccCCChHHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCcC
Confidence 2566778775 46899999999 69999999999999999999999999999999999999999
Q ss_pred cccccccccCCCcceeeecccccCC-cccccccccHHHHhhccC-------CCccCCCCCcHHHHHHHHHHHHHhcChHH
Q 013008 296 GYLWAHEHYGIFPDIMTLAKPLAGG-LPIGAALVTEKVASAINY-------GDHGSTFAGSPLVCNAAIAVLDKISNPAF 367 (451)
Q Consensus 296 G~~~~~~~~~~~pdi~t~sK~lg~G-~~iG~v~~~~~i~~~~~~-------~~~~~t~~~~~~~~aaa~aal~~~~~~~~ 367 (451)
|++|+++++|+.||++|+||+++|| +|+|++++++++++.+.. ..+++||++||++|+|++++|+.++++++
T Consensus 274 G~~~a~~~~gv~PDiv~~gK~l~gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~~l 353 (460)
T PRK06916 274 GKMFACEHENVTPDIMTAGKGLTGGYLPIAITVTTDEIYNAFYGDYEEQKTFFHGHSYTGNPLGCAVALANLELYEKTNL 353 (460)
T ss_pred chhhHHHhcCCCCCeeeeehhhhcCccccceeeecHHHHHHhhccccccCccccCCCCCCCHHHHHHHHHHHHHHHhccH
Confidence 9999999999999999999999999 699999999999987642 24788999999999999999999988777
Q ss_pred HHH-----------H--HhCCCCcceecccceeEEEEecCC-------------hHHHHHHHHHCCceeeecCCCCEEEE
Q 013008 368 LAS-----------K--LARNPHVKDVRGLGLIIGIEFDVS-------------ATPVVDACRDSGLLVLTAGKGNVVRL 421 (451)
Q Consensus 368 ~~~-----------~--~~~~~~~~~v~g~G~~~~~~~~~~-------------~~~~~~~l~~~Gv~~~~~~~~~~iri 421 (451)
.++ + +.+++.+.+++|.|+|+++++..+ ...+...|+++||++.+.+ +.+||
T Consensus 354 ~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g--~~l~~ 431 (460)
T PRK06916 354 IEQVARKTEYVATQLEDLFALKHVGDIRQLGLMVGIELVKNKETKEPFEWTERVGVQVCKRSRELGMLTRPLG--NTIVF 431 (460)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCeEEeecCCceeeEEeecccccccCCCchhhHHHHHHHHHHHCCeEEEecC--CEEEE
Confidence 666 1 123677889999999999998311 2467888999999998864 68999
Q ss_pred eCCCCCCHHHHHHHHHHHHHHHHHHh
Q 013008 422 VPPLIISEQELDQAVEILCKTLPVLD 447 (451)
Q Consensus 422 ~~~~~~t~e~i~~~l~~l~~~l~~~~ 447 (451)
.||+++|++||++++++|+++++++-
T Consensus 432 ~Ppl~it~~~id~~~~~l~~~l~~~~ 457 (460)
T PRK06916 432 MPPLASTIDELDEMLRILYKAISDVT 457 (460)
T ss_pred eCCcccCHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999998753
No 22
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=100.00 E-value=2.2e-66 Score=509.62 Aligned_cols=354 Identities=41% Similarity=0.699 Sum_probs=321.5
Q ss_pred CCCceEEEeecccEEEecCCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHhhccCCCe
Q 013008 78 NRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADR 157 (451)
Q Consensus 78 ~~~p~~~~~~~G~~l~d~~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~e~ 157 (451)
...|+.+++++|+|+||.||++||||.+++++.++||+||+|.+|+.+|+++..+....+.++...+|+++|++..+.++
T Consensus 4 ~~~~~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~la~~l~~~~~~~~ 83 (364)
T PRK04013 4 YRKRLRLVRGEGIYVWDSQGRRYLDLIAGIGVNVLGHNHPEWVEEMSEQLEKLVVAGPMFEHEEKEEMLEELSKWVNYEY 83 (364)
T ss_pred cCCCccEEEeecCEEEECCCCEEEEcccChhhccCCCCCHHHHHHHHHHHHhcCCccCCcCCHHHHHHHHHHHhhcCCCE
Confidence 35688999999999999999999999999999999999999999999999987655445678889999999999888889
Q ss_pred EEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHH
Q 013008 158 VFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEA 237 (451)
Q Consensus 158 v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 237 (451)
++|++||+||++.|+++++.++ +|++||.++.+|||++.+++++++.+.++..+.|..+++..+|++|++.
T Consensus 84 v~~~~SGseA~e~Alklar~~~---------gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~~~~~d~~~ 154 (364)
T PRK04013 84 VYMGNSGTEAVEAALKFARLYT---------GRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKHIPFNDVEA 154 (364)
T ss_pred EEEeCchHHHHHHHHHHHHHHh---------CCCEEEEECCccccCchhhccCCCCcccccCCCCCCCCcEEecCCCHHH
Confidence 9999999999999999999986 3789999999999999999998887777777778888899999999999
Q ss_pred HHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccccccCCCcceeeecccc
Q 013008 238 TRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPL 317 (451)
Q Consensus 238 le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~t~sK~l 317 (451)
+++.+. +++++||+||+++++|.++++++|+++|+++|++||+++|+|||+||| |+|++|+++++++.||++|+||++
T Consensus 155 l~~~i~-~~~aAvivEpi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~-RtG~~~a~~~~gv~PDiv~~gK~l 232 (364)
T PRK04013 155 AKEAIT-KETAAVIFEPIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGL-RTGKFLAIEHYKVEPDIVTMGKGI 232 (364)
T ss_pred HHHHhc-CCcEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcC-CCCchhHHHhcCCCCCEEEecccc
Confidence 999996 479999999999999999999999999999999999999999999999 999999999999999999999999
Q ss_pred cCCcccccccccHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH---HHh--CCCCcceecccceeEEEEe
Q 013008 318 AGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS---KLA--RNPHVKDVRGLGLIIGIEF 392 (451)
Q Consensus 318 g~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~---~~~--~~~~~~~v~g~G~~~~~~~ 392 (451)
+||+|+|+++.++++. ...+++||++||++|+|++++|+.++++++.++ .++ ..+.+.++||.|+|+++++
T Consensus 233 ggG~P~~a~~~~~~~~----~~~~~~T~~gnp~~~aaa~a~l~~i~~~~l~~~~~~~l~~l~~~~v~~vRG~Gl~~gve~ 308 (364)
T PRK04013 233 GNGVPVSLTLTNFDVE----RGKHGSTFGGNPLACKAVAVTLRILRRERLVEKAGEKFIEIKGERVVTTRGRGLMIGIVL 308 (364)
T ss_pred cCCceeEEEEeccccc----CCCcCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHhccCcceeeeeCcEEEEEEe
Confidence 9999999999987762 346889999999999999999999999888877 211 2367889999999999999
Q ss_pred cCChHHHHHHHHHCCceeeecCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHh
Q 013008 393 DVSATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTLPVLD 447 (451)
Q Consensus 393 ~~~~~~~~~~l~~~Gv~~~~~~~~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~~ 447 (451)
......+.+.|+++|+++.+.+. +++||.||+++|++++++++++|+++++++.
T Consensus 309 ~~~~~~i~~~~~~~Gll~~~~g~-~vlr~~Ppl~it~~~i~~~~~~l~~~l~~~~ 362 (364)
T PRK04013 309 KKPVGKYVEELQNRGYLVHTAGQ-RVIRLLPPLIISKDTMEEAKSAIEGVINDIL 362 (364)
T ss_pred CCcHHHHHHHHHhCCcEEeeCCC-CEEEEeCCcccCHHHHHHHHHHHHHHHHHHh
Confidence 65567899999999999988765 8999999999999999999999999998754
No 23
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=3.4e-66 Score=523.49 Aligned_cols=359 Identities=30% Similarity=0.498 Sum_probs=311.5
Q ss_pred CCceEEEeecccEEEecCCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccCC-CCCHHHHHHHHHHhhccC--C
Q 013008 79 RAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNM-YYSIPQIELAKRLVACSF--A 155 (451)
Q Consensus 79 ~~p~~~~~~~G~~l~d~~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~-~~~~~~~~l~~~l~~~~~--~ 155 (451)
+.|+++++++|+||||.||++||||.+++++.++||+||+|.+|+.+|++++.+.... ..++...+|+++|++..+ .
T Consensus 34 ~~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~ 113 (457)
T PRK05639 34 LFPLVPKRGFGALIEDVDGNVFIDFLAGAAAASTGYSHPKLVKAVQEQVALIQHSMIGYTHSERAIRVAEKLAEISPIEN 113 (457)
T ss_pred CCCceEEeeecCEEEeCCCCEEEECCcCHHhhccCCCCHHHHHHHHHHHHhccccccCccCCHHHHHHHHHHHhhCCCCc
Confidence 4689999999999999999999999999999999999999999999999986554332 345678899999999886 4
Q ss_pred CeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCC-CCcCCCCcCCCCCeeEeeCCC
Q 013008 156 DRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK-EHYRSPFEPVMPGVNFVEYGN 234 (451)
Q Consensus 156 e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d 234 (451)
++|+|++||+||++.|+|+||.+|+ |.+||.++++|||++.+++++++. ..++..+.|..+++.++|+++
T Consensus 114 ~~v~f~~SGsEA~e~AlklAr~~tg---------r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~ 184 (457)
T PRK05639 114 PKVLFGLSGSDAVDMAIKVSKFSTR---------RPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPN 184 (457)
T ss_pred CEEEEeCchHHHHHHHHHHHHHhcC---------CCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEeCCCc
Confidence 7999999999999999999999874 788999999999999999887753 234455666667777777753
Q ss_pred -------------H--------HHHHHhc-----CCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEecc
Q 013008 235 -------------I--------EATRKLI-----QPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEV 288 (451)
Q Consensus 235 -------------~--------~~le~~l-----~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv 288 (451)
. +.|++.+ .++++++||+||+++++|.++|+++||++|+++|++||++||+|||
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv 264 (457)
T PRK05639 185 PYRNPWGINGYEEPDELINRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEV 264 (457)
T ss_pred cccccccccccCCHHHHHHHHHHHHHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEech
Confidence 2 2455554 2468999999999999999999999999999999999999999999
Q ss_pred ccCCCcccccccccccCCCcceeeecccccCCcccccccccHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHH
Q 013008 289 QCGLGRTGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFL 368 (451)
Q Consensus 289 ~tg~gr~G~~~~~~~~~~~pdi~t~sK~lg~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~ 368 (451)
+|||||+|.+|+++++|+.||+++|||+++||+|+|++++++++++.. ...+.+|+++||++|+|++++|+.++++++.
T Consensus 265 ~tG~GrtG~~~a~~~~gv~PDiv~~gK~l~gG~pi~av~~~~~i~~~~-~~~~~~T~~g~p~~~aaa~a~l~~l~~~~l~ 343 (457)
T PRK05639 265 QTGIGRTGKWFASEWFEVKPDLIIFGKGVASGMGLSGVIGRKELMDLT-SGSALLTPAANPVISAAAEATLEIIEEENLL 343 (457)
T ss_pred hhccCcCchHHHHHhcCCCCCEEEechhhcCCCcceeEEehHHHHhhc-CCCcccCCCcCHHHHHHHHHHHHHHHHccHH
Confidence 999999999999999999999999999999999999999999999843 3456789999999999999999999887766
Q ss_pred HH--------------HHhCCCCcceecccceeEEEEecC--------ChHHHHHHHHHCCceeeecCC-CCEEEEeCCC
Q 013008 369 AS--------------KLARNPHVKDVRGLGLIIGIEFDV--------SATPVVDACRDSGLLVLTAGK-GNVVRLVPPL 425 (451)
Q Consensus 369 ~~--------------~~~~~~~~~~v~g~G~~~~~~~~~--------~~~~~~~~l~~~Gv~~~~~~~-~~~iri~~~~ 425 (451)
++ +.++++.+.++||.|+|+++++.. ....+.+.|+++|+++.+.+. ++++||.||+
T Consensus 344 ~~~~~~g~~l~~~L~~l~~~~~~~~~VrG~Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~g~~~~~lr~~Ppl 423 (457)
T PRK05639 344 KNALKVGEFIKKRLLEMKESFEVIGDVRGKGLMIGVEIVKENGKPDPELTGKICWRAFELGLILPSYGMFGNVIRITPPL 423 (457)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCEEeeccceeEEEEEEecCCCCCCHHHHHHHHHHHHhCCeEEeecCCCCCEEEEeCCC
Confidence 55 335678888999999999999831 135688889999999987653 4799999999
Q ss_pred CCCHHHHHHHHHHHHHHHHHHh
Q 013008 426 IISEQELDQAVEILCKTLPVLD 447 (451)
Q Consensus 426 ~~t~e~i~~~l~~l~~~l~~~~ 447 (451)
++|++|+|+++++|+++++++.
T Consensus 424 ~it~~~id~~~~~l~~~l~~~~ 445 (457)
T PRK05639 424 VITKEIAEKGLEIMERAIKDAL 445 (457)
T ss_pred ccCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998764
No 24
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=100.00 E-value=3.1e-66 Score=524.56 Aligned_cols=375 Identities=33% Similarity=0.559 Sum_probs=315.0
Q ss_pred hHHHHHHHHhc--ccccCC-CCceEEEeecccEEEecCCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhccc-ccCCC
Q 013008 62 NKEVMEAEKKL--LVGTYN-RAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTH-VSNMY 137 (451)
Q Consensus 62 ~~~~~~~~~~~--~~~~~~-~~p~~~~~~~G~~l~d~~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~-~~~~~ 137 (451)
.+++.+.+.++ ..+.|. +.|+++++++|+|+||.||++||||.+++++.++||+||+|.+|+.+|+++..+ .+..+
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~q~~~~~~~~~~~~ 98 (459)
T PRK06931 19 NETYLARQAEFESNVRSYPRKLPLAIAKAQGVWVTDVEGNQYLDCLAGAGTLALGHNHPDVLQSIQDVLTSGLPLHTLDL 98 (459)
T ss_pred hHHHHHHHHhhhhhccccccCCCceEEeccccEEEeCCCCEEEEcccchhhccCCCCCHHHHHHHHHHHhhhcccccccc
Confidence 34455454322 344443 569999999999999999999999999999999999999999999999986332 22235
Q ss_pred CCHHHHHHHHHHhhccC-C----CeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccC
Q 013008 138 YSIPQIELAKRLVACSF-A----DRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTS 212 (451)
Q Consensus 138 ~~~~~~~l~~~l~~~~~-~----e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~ 212 (451)
.++...+|+++|++..+ . ..+++++||+||++.|+|+||.||+ |++||.++++|||++.+++++++
T Consensus 99 ~~~~~~~lAe~L~~~~p~~~~~~~~~f~~~SGsEAve~AlklAr~~tg---------r~~Ii~~~~~yHG~t~~als~t~ 169 (459)
T PRK06931 99 TTPLKDAFSEYLLSLLPGQGKEYCLQFTGPSGADAVEAAIKLAKTYTG---------RSNVISFSGGYHGMTHGALAVTG 169 (459)
T ss_pred CCHHHHHHHHHHHHhCCCccccceEEEeCCCcHHHHHHHHHHHHHhcC---------CCeEEEECCCcCCccHHHHhhcC
Confidence 67778999999999886 2 1346669999999999999999974 88999999999999999998887
Q ss_pred CCCcCCCCcCCCCCeeEeeCCC-------------HHHH----HHhcC-----CCCeEEEEEccccCCCCccccCHHHHH
Q 013008 213 KEHYRSPFEPVMPGVNFVEYGN-------------IEAT----RKLIQ-----PGKTAAVFVEPIQGEGGIYSATKEFLQ 270 (451)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~d-------------~~~l----e~~l~-----~~~~aavi~ep~~~~~G~~~~~~~~l~ 270 (451)
...++..+.|..+++.++|++| .+.+ ++.++ .+++++||+||+++++|+++++++||+
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~ 249 (459)
T PRK06931 170 NLSPKNAVNGLMPGVQFMPYPHEYRCPLGIGGEAGVKALTYYFENFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQ 249 (459)
T ss_pred CcccccCCCCCCCCcEEeCCCccccccccCCchhHHHHHHHHHHHHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHH
Confidence 6666666667777877777654 2332 33332 246999999999999999999999999
Q ss_pred HHHHHHHHhCCEEEEeccccCCCcccccccccccCCCcceeeecccccCCcccccccccHHHHhhccCCCccCCCCCcHH
Q 013008 271 FLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINYGDHGSTFAGSPL 350 (451)
Q Consensus 271 ~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~t~sK~lg~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~ 350 (451)
+|+++|++||++||+|||+|||||+|++|+++++|+.||++|+||+++||+|+|++++++++ +.+.+..+++||++||+
T Consensus 250 ~lr~lc~~~g~LlI~DEV~tGfGRtG~~~a~~~~gv~PDivt~gK~l~gG~Pi~av~~~~~~-~~~~~~~~~~T~~gnpl 328 (459)
T PRK06931 250 KIREVTQKHGILLIVDEVQAGFARTGKMFAFEHAGIEPDIIVMSKAVGGGLPLAVLGIKKEF-DAWQPGGHTGTFRGNQL 328 (459)
T ss_pred HHHHHHHHcCCEEEEecchhcCCcCchHHHhhhcCCCCCEEEecccccCCcceeeeeeHHHH-hhccCCCCCCCCCCCHH
Confidence 99999999999999999999999999999999999999999999999999999999888774 77766678999999999
Q ss_pred HHHHHHHHHHHhcChHHHHH--------------HHhCCCCcceecccceeEEEEecCC----------------hHHHH
Q 013008 351 VCNAAIAVLDKISNPAFLAS--------------KLARNPHVKDVRGLGLIIGIEFDVS----------------ATPVV 400 (451)
Q Consensus 351 ~~aaa~aal~~~~~~~~~~~--------------~~~~~~~~~~v~g~G~~~~~~~~~~----------------~~~~~ 400 (451)
+|++++++|+++++++++++ +.+++|.+.++||.|+|+++++..+ ...+.
T Consensus 329 a~aaala~L~~l~~~~l~~~~~~~G~~l~~~L~~l~~~~~~i~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~~~~~~ 408 (459)
T PRK06931 329 AMATGLTTLKILKEENLAQNAAERGEWLKAQLAELQKRYPCIGNVRGRGLMIGIEIVDERQPADAMGSYPADGELAAAIQ 408 (459)
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhCCCeEeEecCceEEEEEEccCcccccccccCCccHHHHHHHH
Confidence 99999999999988776665 4467888899999999999998311 23577
Q ss_pred HHHHHCCceeeecCC-CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 013008 401 DACRDSGLLVLTAGK-GNVVRLVPPLIISEQELDQAVEILCKTLPVL 446 (451)
Q Consensus 401 ~~l~~~Gv~~~~~~~-~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~ 446 (451)
..|+++|+++.+.+. ++++|+.||+++|++|+++++++|+++++++
T Consensus 409 ~~~~~~Gvl~~~~~~~~~~l~~~Ppl~it~~eid~~~~~l~~~l~~~ 455 (459)
T PRK06931 409 KACFENGLLLERGGRNGNVVRLLPPLLITQAECEEFIDRFEQALLAA 455 (459)
T ss_pred HHHHHCCcEEeecCCCCCEEEEECCCCcCHHHHHHHHHHHHHHHHHH
Confidence 788999999987643 5899999999999999999999999999764
No 25
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=6.7e-66 Score=518.24 Aligned_cols=367 Identities=36% Similarity=0.579 Sum_probs=319.9
Q ss_pred ccccCCCC-ceEEEeecccEEEecCCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccC-CCCCHHHHHHHHHHh
Q 013008 73 LVGTYNRA-PVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSN-MYYSIPQIELAKRLV 150 (451)
Q Consensus 73 ~~~~~~~~-p~~~~~~~G~~l~d~~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~-~~~~~~~~~l~~~l~ 150 (451)
..+.+.+. |+++++|+|+||||.||++||||.+++++.++||+||+|.+|+++|++++.+... .+.++...+|+++|+
T Consensus 14 ~~~~~~~~~p~~i~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~~~~~~~~~~~la~~l~ 93 (425)
T PRK07495 14 ISRGVGMTTQIYADRAENAEIWDKEGRRYIDFAAGIAVVNTGHRHPRVIAAVKAQLDRFTHTCHQVVPYENYVRLAERLN 93 (425)
T ss_pred hccccCcCCCeeEEeeeecEEEeCCCCEEEEccccHHhhccCCCCHHHHHHHHHHHhhccCcccCccCCHHHHHHHHHHH
Confidence 34445444 8999999999999999999999999999999999999999999999998765432 456777899999999
Q ss_pred hccC---CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCC-CCcCCCCcCCCCC
Q 013008 151 ACSF---ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK-EHYRSPFEPVMPG 226 (451)
Q Consensus 151 ~~~~---~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~-~~~~~~~~~~~~~ 226 (451)
+..+ .++|+|++||+||++.|+|+||.+++ |.+||.++++|||++.+++++++. ..++..+.|..++
T Consensus 94 ~~~p~~~~~~v~f~~SGseA~e~AlklAr~~tg---------r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~ 164 (425)
T PRK07495 94 ALVPGDFAKKTIFVTTGAEAVENAVKIARAATG---------RSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPD 164 (425)
T ss_pred HhCCCCCCCEEEECCchHHHHHHHHHHHHHhhC---------CCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCC
Confidence 9886 37999999999999999999999974 778999999999999998887764 3455566666678
Q ss_pred eeEeeCCC----------HHHHHHhcC----CCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCC
Q 013008 227 VNFVEYGN----------IEATRKLIQ----PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGL 292 (451)
Q Consensus 227 ~~~~~~~d----------~~~le~~l~----~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~ 292 (451)
+.++|+++ +++++++++ .+++++||+||+++++|.++++++|+++|+++|++||+++|+||||+||
T Consensus 165 ~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~ 244 (425)
T PRK07495 165 VYHVPFPVELHGVSVEQSLAALDKLFKADVDPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQTGF 244 (425)
T ss_pred eEEecCCcccccccHHHHHHHHHHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhcC
Confidence 88888764 556677764 3579999999999999988999999999999999999999999999999
Q ss_pred CcccccccccccCCCcceeeecccccCCcccccccccHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH--
Q 013008 293 GRTGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS-- 370 (451)
Q Consensus 293 gr~G~~~~~~~~~~~pdi~t~sK~lg~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~-- 370 (451)
||+|.+++++++++.||++||||++++|+|+|++++++++++.+....+.+||++||++|++++++|++++++++.++
T Consensus 245 gr~G~~~a~~~~gv~pDi~tlsK~l~~G~pigav~~~~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~~l~~~~~ 324 (425)
T PRK07495 245 ARTGKLFAMEHHEVAADLTTMAKGLAGGFPLAAVTGRAEIMDAPGPGGLGGTYGGNPLGIAAAHAVLDVIEEEDLCERAN 324 (425)
T ss_pred CcCCCceeecccCCCCCEEeehhhhcCCccceEEEEcHHHHhccCCCCcCCCCCCCHHHHHHHHHHHHHHHhchHHHHHH
Confidence 999998899999999999999999999999999999999999987777889999999999999999999987766655
Q ss_pred ------------HHhCCCCcceecccceeEEEEecCC---------hHHHHHHHHHCCceeeecCC-CCEEEEeCCCCCC
Q 013008 371 ------------KLARNPHVKDVRGLGLIIGIEFDVS---------ATPVVDACRDSGLLVLTAGK-GNVVRLVPPLIIS 428 (451)
Q Consensus 371 ------------~~~~~~~~~~v~g~G~~~~~~~~~~---------~~~~~~~l~~~Gv~~~~~~~-~~~iri~~~~~~t 428 (451)
+.+++|.+..+++.|+|+++++... ...+.+.|+++|+++.+.+. ++++||.||+++|
T Consensus 325 ~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~~iel~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~g~~~~~~r~~Ppl~it 404 (425)
T PRK07495 325 QLGNRLKQRLASLRETVPEIADIRGPGFMNAVEFNDADSGLPSAEFANRVRLKALEKGLILLTCGVHGNVIRFLAPITIQ 404 (425)
T ss_pred HHHHHHHHHHHHHHhhCCCeeeeecCceEEEEEEecCCCCCccHHHHHHHHHHHHHCCeEEeecCCCCCEEEEeCCCccC
Confidence 3455787888999999999999321 34678888999999977543 5899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhh
Q 013008 429 EQELDQAVEILCKTLPVLDS 448 (451)
Q Consensus 429 ~e~i~~~l~~l~~~l~~~~~ 448 (451)
++++|+++++|++++++++.
T Consensus 405 ~~~id~~~~~l~~~l~~~~~ 424 (425)
T PRK07495 405 DDVFAEALDILEASILEASA 424 (425)
T ss_pred HHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999988753
No 26
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=100.00 E-value=8.9e-66 Score=514.70 Aligned_cols=368 Identities=43% Similarity=0.740 Sum_probs=327.2
Q ss_pred cCCCCceEEEeecccEEEecCCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHhhccC-
Q 013008 76 TYNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSF- 154 (451)
Q Consensus 76 ~~~~~p~~~~~~~G~~l~d~~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~- 154 (451)
.+.+.|+++++++|+||||+||++||||.+++++.++||+||+|.+|+.+|+++..+.+..+.+++..+|+++|++..+
T Consensus 18 ~~~~~~~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~la~~L~~~~~~ 97 (408)
T PRK04612 18 VYRPRQVVLERGQGSRVWDDQGREYLDLAAGIAVCGLGHNDPDLVAALTEQAGKLWHTSNVFYSAPPLKLAEELVTASRF 97 (408)
T ss_pred ccCCCCceEEEeeeCEEEECCCCEEEEcCccHhhccCCCCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHhhCCC
Confidence 3557789999999999999999999999999999999999999999999999987665444567788999999999875
Q ss_pred CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCC
Q 013008 155 ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGN 234 (451)
Q Consensus 155 ~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 234 (451)
.++++|++||+||++.|+|+||.|++..+.. +++.+||.++++|||++.++++.++.+.++..+.+..+++..+|++|
T Consensus 98 ~~~v~f~~sGseA~e~AlklAr~~~~~~g~~--~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d 175 (408)
T PRK04612 98 AEKVFLCNSGTEANEAAIKLVRKWASSQGRP--ADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYVDFND 175 (408)
T ss_pred CCEEEEcCchHHHHHHHHHHHHHHHHhhCCC--CCCcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCceEcCCCC
Confidence 5899999999999999999999997543321 13668999999999999999998887766666767667788899999
Q ss_pred HHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccccccCCCcceeeec
Q 013008 235 IEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLA 314 (451)
Q Consensus 235 ~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~t~s 314 (451)
++.++++++++++++||+||+++++|+++++++|+++|+++|++||+++|+||||+||||+|.+++...+++.||++|||
T Consensus 176 ~~~l~~~~~~~~~aavi~eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~a~~~~~~~pdi~t~~ 255 (408)
T PRK04612 176 VEALEAAMAGGDVAAVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTGTLFAHWQEQVTPDIVTLA 255 (408)
T ss_pred HHHHHHhhCCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCchhhhhhcCCCCCEEEEc
Confidence 99999999867899999999999999999999999999999999999999999999999999988877889999999999
Q ss_pred ccccCCcccccccccHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH--------------HHhCCCCcce
Q 013008 315 KPLAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS--------------KLARNPHVKD 380 (451)
Q Consensus 315 K~lg~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~--------------~~~~~~~~~~ 380 (451)
|++++|+|+|++++++++++.+....+.+||++||++|+++.++|+.++++++.++ +.++++.+.+
T Consensus 256 K~l~~G~piga~~~~~~~~~~~~~~~~~~t~~~~p~~~aaa~a~L~~~~~~~l~~~~~~~g~~l~~~l~~l~~~~~~i~~ 335 (408)
T PRK04612 256 KALGGGFPIGAMLAGPKVAETMQFGAHGTTFGGNPLAAAVARVALRKLASPQIAANVARQSAALRAGLEALNAEFGVFAQ 335 (408)
T ss_pred chhcCCCceEEEEECHHHHhhhcCCCcCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhCCCeee
Confidence 99999999999999999999887767889999999999999999999987776655 3355677889
Q ss_pred ecccceeEEEEecC----ChHHHHHHHHHCCceeeecCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 013008 381 VRGLGLIIGIEFDV----SATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTLPVL 446 (451)
Q Consensus 381 v~g~G~~~~~~~~~----~~~~~~~~l~~~Gv~~~~~~~~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~ 446 (451)
++|.|+|+++++.. .+..+++.|+++|+++.+.+. +.+|+.|++.+|++||++++++|++++.++
T Consensus 336 vrg~Gl~~~i~~~~~~~~~a~~i~~~l~~~Gvlv~~~g~-~~lRl~Ppl~it~eeid~~l~~l~~~l~~~ 404 (408)
T PRK04612 336 VRGRGLMLGAVLAPAHAGQAGAILDLAAEHGLLLLQAGP-DVLRFVPALNLTDAELADGLARLRLALADY 404 (408)
T ss_pred eeccceEEEEEecCchhhHHHHHHHHHHHCCeEEeeCCC-CEEEEcCCccCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999842 256788899999999988765 899999999999999999999999999875
No 27
>PRK07480 putative aminotransferase; Validated
Probab=100.00 E-value=4.3e-66 Score=523.16 Aligned_cols=363 Identities=31% Similarity=0.516 Sum_probs=308.4
Q ss_pred CceEEEeecccEEEecCCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccC--CCCCHHHHHHHHHHhhccC--C
Q 013008 80 APVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSN--MYYSIPQIELAKRLVACSF--A 155 (451)
Q Consensus 80 ~p~~~~~~~G~~l~d~~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~--~~~~~~~~~l~~~l~~~~~--~ 155 (451)
.|+++++++|+|+||.||++||||.+++++.++||+||+|.+|+.+|++++.+.+. .+.++...+|+++|++..+ .
T Consensus 32 ~~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~ 111 (456)
T PRK07480 32 GSRVITRAEGVYLWDSEGNKILDGMAGLWCVNVGYGRKELADAAARQMRELPYYNTFFKTTHPPAIELAAKLAEVAPPGF 111 (456)
T ss_pred CCceEEeceeeEEEeCCCCEEEEccchHHHhcCCCCCHHHHHHHHHHHHhcCCcccccccCCHHHHHHHHHHHHhCCCCc
Confidence 47899999999999999999999999999999999999999999999998765432 3567889999999999985 6
Q ss_pred CeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCC--
Q 013008 156 DRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYG-- 233 (451)
Q Consensus 156 e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 233 (451)
++|+|++||+||++.|+|+||.|+..++.. +|.+||.++++|||++.+++++++...++..+.+..+++..++++
T Consensus 112 ~~v~f~~SGseA~e~AlklAr~~~~~~g~~---~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~~~~p~~ 188 (456)
T PRK07480 112 NHVFFTNSGSEANDTVLRMVRHYWALKGKP---QKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQPYW 188 (456)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHHHhcCCC---CCcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCCCeecCCCcc
Confidence 799999999999999999999997544322 478899999999999999988887654444343434555544432
Q ss_pred -------------C--HHHHHHhcC---CCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcc
Q 013008 234 -------------N--IEATRKLIQ---PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRT 295 (451)
Q Consensus 234 -------------d--~~~le~~l~---~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~ 295 (451)
| +++|++.+. .+++++||+||+++++|+++++++||++|+++|++||++||+|||+|||||+
T Consensus 189 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRt 268 (456)
T PRK07480 189 FGEGGDMTPEEFGLAAARQLEAKILELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVICGFGRT 268 (456)
T ss_pred cccccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcC
Confidence 1 366765553 4689999999999999999999999999999999999999999999999999
Q ss_pred cccccccccCCCcceeeecccccCC-cccccccccHHHHhhcc--CC--CccCCCCCcHHHHHHHHHHHHHhcChHHHHH
Q 013008 296 GYLWAHEHYGIFPDIMTLAKPLAGG-LPIGAALVTEKVASAIN--YG--DHGSTFAGSPLVCNAAIAVLDKISNPAFLAS 370 (451)
Q Consensus 296 G~~~~~~~~~~~pdi~t~sK~lg~G-~~iG~v~~~~~i~~~~~--~~--~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~ 370 (451)
|++|+++++|+.||++||||+++|| +|+|++++++++++.+. .. .+++||++||++|+|++++|++++++++.++
T Consensus 269 G~~~a~~~~gv~PDiv~~gK~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~~~~l~~~ 348 (456)
T PRK07480 269 GEWFGSQHFGIKPDLMTIAKGLTSGYIPMGAVGVGDRVAEVLIEEGGEFNHGFTYSGHPVAAAVALANLRILRDEGIVER 348 (456)
T ss_pred cchhhhhhcCCCCCeeeeehhhccCCccceEEEEcHHHHHHHhcCCCCcccCCCCCcCHHHHHHHHHHHHHHHhCCHHHH
Confidence 9999999999999999999999999 59999999999999882 22 5789999999999999999999977655433
Q ss_pred ------------H--HhCCCCcceecccceeEEEEecCC-------------hHHHHHHHHHCCceeeecCCCCEEEEeC
Q 013008 371 ------------K--LARNPHVKDVRGLGLIIGIEFDVS-------------ATPVVDACRDSGLLVLTAGKGNVVRLVP 423 (451)
Q Consensus 371 ------------~--~~~~~~~~~v~g~G~~~~~~~~~~-------------~~~~~~~l~~~Gv~~~~~~~~~~iri~~ 423 (451)
+ ++++|.+.+++|.|+|+++++..+ ...+.+.|+++||++.+.+ +.+||.|
T Consensus 349 ~~~~~g~~l~~~l~~l~~~~~i~~vrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~~--~~l~~~P 426 (456)
T PRK07480 349 VRDDTGPYLQKRLRELADHPLVGEVRGVGLVGAIELVKDKATRERFEAGGGVGTICRDHCFANGLIMRAVG--DRMIISP 426 (456)
T ss_pred HHHHHHHHHHHHHHHhhcCCCeeeEEeecceEEEEEeccccccccCcchhhHHHHHHHHHHHCCcEEeecC--CEEEEEC
Confidence 1 135677889999999999999311 1356778899999998753 7899999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHh
Q 013008 424 PLIISEQELDQAVEILCKTLPVLD 447 (451)
Q Consensus 424 ~~~~t~e~i~~~l~~l~~~l~~~~ 447 (451)
|+++|++|||+++++|++++.+++
T Consensus 427 pl~it~~eid~~~~~l~~al~~~~ 450 (456)
T PRK07480 427 PLVITHAEIDELVEKARKALDATA 450 (456)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999998874
No 28
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=100.00 E-value=3.3e-66 Score=527.91 Aligned_cols=363 Identities=29% Similarity=0.554 Sum_probs=309.2
Q ss_pred CceEEEeecccEEEecCCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccC--CCCCHHHHHHHHHHhhccC---
Q 013008 80 APVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSN--MYYSIPQIELAKRLVACSF--- 154 (451)
Q Consensus 80 ~p~~~~~~~G~~l~d~~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~--~~~~~~~~~l~~~l~~~~~--- 154 (451)
.|+++++++|+|+||.|||+||||.+++++.+|||+||+|++|+.+|++++.+.+. .+.+++..+|+++|.+.+.
T Consensus 71 ~p~~i~~~~G~~l~D~dG~~ylD~~sg~~~~~lGh~hp~v~~Av~~ql~~~~~~~~~~~~~~~~~~~lae~L~~~~~~~~ 150 (504)
T PLN02760 71 EPLVIEKSEGSYVYDINGKKYLDALAGLWCTALGGSEPRLVAAATEQLNKLPFYHSFWNRTTKPSLDLAKELLEMFTARK 150 (504)
T ss_pred CCceEEeeeeeEEEECCCCEEEEcCcCHHhcccCCCCHHHHHHHHHHHhhccceecccccCcHHHHHHHHHHHhhcCCCC
Confidence 58999999999999999999999999999999999999999999999998765432 3467779999999999853
Q ss_pred CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCC
Q 013008 155 ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGN 234 (451)
Q Consensus 155 ~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 234 (451)
.++++|++||+|||+.|+|+|+.|++..+.+ ++.+||.++.+|||++.+++++++.+.+...+.+..+++..+++++
T Consensus 151 ~~~v~f~~SGsEA~e~AlKlAr~~~~~~g~~---~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~~~~p~ 227 (504)
T PLN02760 151 MGKVFFTNSGSEANDTQVKLVWYYNNALGRP---NKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCPH 227 (504)
T ss_pred CCEEEEeCChHHHHHHHHHHHHHHHHhcCCC---CCcEEEEECCCccCChHhhhhccCChhhccCCCCCCCCcEEeCCCc
Confidence 4689999999999999999999987544322 4789999999999999999988876554444444334444433211
Q ss_pred ------------------HHHHHHhcC---CCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCC
Q 013008 235 ------------------IEATRKLIQ---PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLG 293 (451)
Q Consensus 235 ------------------~~~le~~l~---~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~g 293 (451)
.++|++++. ++++++||+||+++++|+++|+++||++|+++|++||++||+|||+||||
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfG 307 (504)
T PLN02760 228 YWRFHLPGETEEEFSTRLADNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFG 307 (504)
T ss_pred ccccCCCCCcHHHHHHHHHHHHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCc
Confidence 245777663 45799999999999999999999999999999999999999999999999
Q ss_pred cccccccccccCCCcceeeecccccCC-cccccccccHHHHhhccC-------CCccCCCCCcHHHHHHHHHHHHHhcCh
Q 013008 294 RTGYLWAHEHYGIFPDIMTLAKPLAGG-LPIGAALVTEKVASAINY-------GDHGSTFAGSPLVCNAAIAVLDKISNP 365 (451)
Q Consensus 294 r~G~~~~~~~~~~~pdi~t~sK~lg~G-~~iG~v~~~~~i~~~~~~-------~~~~~t~~~~~~~~aaa~aal~~~~~~ 365 (451)
|+|++|+++++|+.||++||||+++|| +|+|++++++++++.+.. ..|++||++||++|+|++++|++++++
T Consensus 308 RtG~~~a~e~~gv~PDivtlgK~lggG~~PigAv~~~~~i~d~~~~~~~~~~~~~h~~T~~gnPl~~Aaala~Le~i~~~ 387 (504)
T PLN02760 308 RLGTMFGCDKYNIKPDLVSLAKALSSAYMPIGAVLVSPEISDVIHSQSNKLGSFAHGFTYSGHPVSCAVALEALKIYKER 387 (504)
T ss_pred ccchhhHHHhcCCCCcEEEecccccCCccccceEeecHHHHhhhhcccccccCcccCCCCCCCHHHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999 599999999999998853 257899999999999999999999887
Q ss_pred HHHHH-------------HHhCCCCcceecccceeEEEEecC--C-----------hHHHHHHHHHCCceeeecCCCCEE
Q 013008 366 AFLAS-------------KLARNPHVKDVRGLGLIIGIEFDV--S-----------ATPVVDACRDSGLLVLTAGKGNVV 419 (451)
Q Consensus 366 ~~~~~-------------~~~~~~~~~~v~g~G~~~~~~~~~--~-----------~~~~~~~l~~~Gv~~~~~~~~~~i 419 (451)
++.++ -++++|.+.++||.|+|+++++.. . ...+.+.|+++||++.+.+ +.+
T Consensus 388 ~l~~~~~~~g~~l~~~L~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g--~~l 465 (504)
T PLN02760 388 NIPEHVNKIAPRFQDGIKAFSGSPIIGEIRGTGLILGTEFVDNKSPNDPFPAEWGVGAYFGAECKKRGMLVRVAG--DNI 465 (504)
T ss_pred CHHHHHHHHHHHHHHHHHHHhcCCCeeeEEeCceEEEEEEecCCcccccccchhHHHHHHHHHHHhCCcEEEecC--CEE
Confidence 76666 114567888999999999999831 1 3457888999999998764 679
Q ss_pred EEeCCCCCCHHHHHHHHHHHHHHHHHHh
Q 013008 420 RLVPPLIISEQELDQAVEILCKTLPVLD 447 (451)
Q Consensus 420 ri~~~~~~t~e~i~~~l~~l~~~l~~~~ 447 (451)
||+||+++|++|||+++++|++++++++
T Consensus 466 rl~Ppl~it~eeid~~~~~l~~al~~~~ 493 (504)
T PLN02760 466 MMSPPLIITPEEVDELISIYGKALKATE 493 (504)
T ss_pred EEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999987763
No 29
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=8e-66 Score=520.61 Aligned_cols=378 Identities=29% Similarity=0.594 Sum_probs=323.3
Q ss_pred chHHHHHHHHhcccccC--CCCceEEEeecccEEEecCCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccC-CC
Q 013008 61 NNKEVMEAEKKLLVGTY--NRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSN-MY 137 (451)
Q Consensus 61 ~~~~~~~~~~~~~~~~~--~~~p~~~~~~~G~~l~d~~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~-~~ 137 (451)
.++.+.+...++..+.+ ...|+++++++|+|+||.|||+||||.+++++.++||+||+|.+|+.+|++++.+... .+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~~~~~~~~~~ 82 (445)
T PRK08593 3 KAHQLIQEDEHYFAKSGRIKYYPLVIDHGYGATLTDVDGKTYIDLLASASSQNVGHAPPRVVEAIKAQADKFIHYTPAYM 82 (445)
T ss_pred hHHHHHHHHHHhhccccccCCCCceEEeeeeCEEEeCCCCEEEECCccHHhhcCCCCCHHHHHHHHHHHHhccCcccccc
Confidence 34455555555555544 3368999999999999999999999999999999999999999999999998765433 35
Q ss_pred CCHHHHHHHHHHhhccC-C--CeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCC
Q 013008 138 YSIPQIELAKRLVACSF-A--DRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKE 214 (451)
Q Consensus 138 ~~~~~~~l~~~l~~~~~-~--e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~ 214 (451)
.++...+|+++|++..+ . ++|+|++||+||++.|+|+||.+|+ |.+||.++++|||++.+++++++..
T Consensus 83 ~~~~~~~lae~L~~~~p~~~~~~v~f~~SGseA~e~AiklAr~~tg---------r~~ii~~~~~YHG~t~~als~s~~~ 153 (445)
T PRK08593 83 YHEPLVRLAKKLCELAPGDFEKRVTFGLSGSDANDGIIKFARAYTG---------RPYIISFTNAYHGSTYGSLSMSGIS 153 (445)
T ss_pred CCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHHHhhC---------CCeEEEECCCcCCCcHHHHhhcCCC
Confidence 67789999999999985 2 6999999999999999999999974 7889999999999999999888643
Q ss_pred -CcCCCCcCCCCCeeEeeCCCH-----------------HHHHHhcC----CCCeEEEEEccccCCCCccccCHHHHHHH
Q 013008 215 -HYRSPFEPVMPGVNFVEYGNI-----------------EATRKLIQ----PGKTAAVFVEPIQGEGGIYSATKEFLQFL 272 (451)
Q Consensus 215 -~~~~~~~~~~~~~~~~~~~d~-----------------~~le~~l~----~~~~aavi~ep~~~~~G~~~~~~~~l~~l 272 (451)
.++..+.|..+++.++|++|. ++++++++ .+++++||+||+++++|.++++++||++|
T Consensus 154 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l 233 (445)
T PRK08593 154 LNMRRKYGPLLPGFVHIPFPDKYRGMYEEPDANFVEEYLAPLKEMFEKYLPADEVACIVIETIQGDGGLLEPVPGYFEAL 233 (445)
T ss_pred cccccCCCCCCCCcEEeCCCccccccccCCcHHHHHHHHHHHHHHHHhhcCCCceEEEEEccccCCCCCcCCCHHHHHHH
Confidence 234445666677777766532 44555553 36799999999999999999999999999
Q ss_pred HHHHHHhCCEEEEeccccCCCcccccccccccCCCcceeeecccccCCcccccccccHHHHhhccCCCccCCCCCcHHHH
Q 013008 273 RDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVC 352 (451)
Q Consensus 273 ~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~t~sK~lg~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~ 352 (451)
+++|++||++||+||||+||||+|.+++++++++.||++|+||++++|+|+|++++++++++.+....+.+|+++||++|
T Consensus 234 ~~lc~~~g~llI~DEv~tg~GrtG~~~a~~~~gv~pDi~t~gK~l~~G~p~gav~~~~~i~~~~~~~~~~~T~~~~pl~~ 313 (445)
T PRK08593 234 YKFCREHGILFAVDDIQQGLGRTGKWSSISHFNITPDLMSFGKSLAGGMPMSAIVGRKEIMESLEAPAHLFTTGANPVSC 313 (445)
T ss_pred HHHHHHcCCEEEEechhhCCCcCchHHHHHhcCCCCCEeeecccccCCcccEEEEEcHHHHhhhccCCCCCCCCCCHHHH
Confidence 99999999999999999999999999899999999999999999999999999999999999987666788999999999
Q ss_pred HHHHHHHHHhcChHHHHH--------------HHhCCCCcceecccceeEEEEecC----------ChHHHHHHHHHCCc
Q 013008 353 NAAIAVLDKISNPAFLAS--------------KLARNPHVKDVRGLGLIIGIEFDV----------SATPVVDACRDSGL 408 (451)
Q Consensus 353 aaa~aal~~~~~~~~~~~--------------~~~~~~~~~~v~g~G~~~~~~~~~----------~~~~~~~~l~~~Gv 408 (451)
+|++++|+.++++++.++ +.+++|.+.++||.|+++++++.. ....++..|+++||
T Consensus 314 aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Gl~~gi~l~~~~~~~~~~~~~~~~~~~~~~~~Gv 393 (445)
T PRK08593 314 AAALATIDMIEDESLLQRSAEKGEYARKRFDQWVSKYNFVGDVRGYGLSIGIDIVSDKKLKTRDNEAALKICNYCFEHGV 393 (445)
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCCcEEEEeccceEEEEEEecCCCcCCCcHHHHHHHHHHHHHCCe
Confidence 999999999988777655 335678889999999999998831 13468888999999
Q ss_pred eeeecCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHhh
Q 013008 409 LVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTLPVLDS 448 (451)
Q Consensus 409 ~~~~~~~~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~~~ 448 (451)
++.+.+. +++||.||+++|++||++++++++++++++..
T Consensus 394 ~~~~~~~-~~lr~~p~l~~t~~~id~~~~~l~~~l~~~~~ 432 (445)
T PRK08593 394 VIIAVAG-NVLRFQPPLVITYEQLDTALNTIEQAFTALEA 432 (445)
T ss_pred EEeccCC-CEEEEECCCccCHHHHHHHHHHHHHHHHHHhc
Confidence 9977543 78999999999999999999999999988754
No 30
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=100.00 E-value=1.1e-65 Score=515.16 Aligned_cols=368 Identities=44% Similarity=0.784 Sum_probs=325.0
Q ss_pred cccCCCCceEEEeecccEEEecCCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHhhcc
Q 013008 74 VGTYNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACS 153 (451)
Q Consensus 74 ~~~~~~~p~~~~~~~G~~l~d~~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 153 (451)
.+.|.+.|+++++++|+++||.||++||||.+++++.+|||+||+|.+|+.++++++.+....+.++...+|+++|++..
T Consensus 11 ~~~~~~~~~~~~~~~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~L~~~~ 90 (397)
T TIGR03246 11 VPNYAPAPFIPVRGEGSRVWDQQGKEYIDFAGGIAVNALGHAHPELVKALIEQADKLWHIGNGYTNEPVLRLAKKLVDAT 90 (397)
T ss_pred hcccCCCCceEEEeecCEEEeCCCCEEEECCcCHhhccCCCCCHHHHHHHHHHHHhcccccCccCCHHHHHHHHHHHhhC
Confidence 33456779999999999999999999999999999999999999999999999998544333456777999999999998
Q ss_pred CCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCC
Q 013008 154 FADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYG 233 (451)
Q Consensus 154 ~~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (451)
+.++++|++||+|||+.|++++|.||..+++. +|++||.++.+|||++..++++++.+.+...+.|..+++..+++|
T Consensus 91 ~~~~~~f~~SGseA~e~Alk~ar~~~~~~~~~---~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (397)
T TIGR03246 91 FADKVFFCNSGAEANEAALKLARRYALDKHGA---DKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAPYN 167 (397)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCC---CCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeCCC
Confidence 88999999999999999999999997543222 478999999999999999888887766666677777888899999
Q ss_pred CHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccccccCCCcceeee
Q 013008 234 NIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTL 313 (451)
Q Consensus 234 d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~t~ 313 (451)
|++++++++. +++++||+||+++++|.++++++||++|+++|++||+++|+||||+||||+|.+++++++++.||++|+
T Consensus 168 d~~~l~~~l~-~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~G~~~a~~~~gv~pDi~t~ 246 (397)
T TIGR03246 168 DLAAAKALIS-DKTCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDILTS 246 (397)
T ss_pred CHHHHHHHhc-cCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCccccchhhhhcCCCCCEEEe
Confidence 9999999996 479999999999999999999999999999999999999999999999999998888999999999999
Q ss_pred cccccCCcccccccccHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH--------------HHhCCCCcc
Q 013008 314 AKPLAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS--------------KLARNPHVK 379 (451)
Q Consensus 314 sK~lg~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~--------------~~~~~~~~~ 379 (451)
||++++|+|+|++++++++++.+....+.+||++||++|++++++|+.++++++.++ +..+++.+.
T Consensus 247 ~K~lggG~pigav~~~~~i~~~~~~~~~~~t~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~~~~l~~~L~~l~~~~~~~~ 326 (397)
T TIGR03246 247 AKALGGGFPIGAMLTTTEIAAHLKVGTHGTTYGGNPLACAVAGKVLDLVNTPELLAGVKQRHDLFVDGLEKINARYNVFS 326 (397)
T ss_pred ehhhhCCcceeEEEEcHHHHHhccCCCcCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhcCCCeE
Confidence 999998999999999999999997667788999999999999999998876666555 223355677
Q ss_pred eecccceeEEEEecC----ChHHHHHHHHHCCceeeecCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 013008 380 DVRGLGLIIGIEFDV----SATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTLPVL 446 (451)
Q Consensus 380 ~v~g~G~~~~~~~~~----~~~~~~~~l~~~Gv~~~~~~~~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~ 446 (451)
.+++.|+++++++.. ....+++.|+++|+++.+.+. +++|+.|++.+|+++|++++++|++++.++
T Consensus 327 ~vrg~G~~~~i~~~~~~~~~~~~~~~~l~~~Gv~~~~~g~-~~lR~~p~~~~t~~~i~~~~~~l~~~l~~~ 396 (397)
T TIGR03246 327 EIRGKGLLIGAVLTEAYQGKAKQFVNAAAEEGVIALIAGP-NVVRFAPSLVISDDDIDEGLARFERAIEQV 396 (397)
T ss_pred eeecCceEEEEEEcCchhhHHHHHHHHHHHCCeEEeecCC-CEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 889999999998832 356889999999999988765 789999999999999999999999998754
No 31
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.8e-66 Score=487.23 Aligned_cols=388 Identities=49% Similarity=0.827 Sum_probs=336.9
Q ss_pred hhhhccCCCCCCcchHHHHHHHHhcccccCCCCceEEEeecccEEEecCCCEEEeeccCcccccCCCCCHHHHHHHHHHH
Q 013008 48 NDAARGSAGGLGRNNKEVMEAEKKLLVGTYNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQA 127 (451)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~G~~l~d~~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~ 127 (451)
..++...+++..+.++ .+.+|.+.|+.+.+++|++++|.||++||||+++|++..+||+||+|.+|+.+++
T Consensus 15 ~~~~~~~~~i~~~~~~---------~~~t~a~~pv~~~~gkg~kl~D~~g~EyiD~~ssw~~~~~Ghanpev~ral~~q~ 85 (433)
T KOG1401|consen 15 NAASVSMPGIVEEKTR---------IVSTYARYPVVIESGKGSKLFDPDGKEYIDFTSSWAVTILGHANPEVARALAEQA 85 (433)
T ss_pred cchhhccccccccceE---------EeeecCCCceeeecceeeeeecCCcceeeeeccceeccccCCCCHHHHHHHHHHH
Confidence 3344555666544443 3446778999999999999999999999999999999999999999999999999
Q ss_pred hhcccccCCCCCHHHHHHHHHHhhcc---CCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCCh
Q 013008 128 NVLTHVSNMYYSIPQIELAKRLVACS---FADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRT 204 (451)
Q Consensus 128 ~~~~~~~~~~~~~~~~~l~~~l~~~~---~~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~ 204 (451)
.++.|.++.+++....++++.|.+.. ..++|+|+|||+|||+.||++||+++....+. .+.++|.|+++|||.+
T Consensus 86 ~k~~hs~~~~~t~eav~l~~~l~~~~~~~~~~rvff~nsGTeAne~ALK~Ark~~~~~~~~---~~t~~Iaf~nsyHG~t 162 (433)
T KOG1401|consen 86 KKLGHSSNGYFTLEAVELEEVLSAVLGKGSAERVFFCNSGTEANETALKFARKFTGKKHPE---KKTKFIAFENSYHGRT 162 (433)
T ss_pred hhheeccCccccHHHHHHHHHHHhcccCCCccEEEEecCCcHHHHHHHHHHHHhhcccCCc---cceeEEEEecCcCCcc
Confidence 99999888888877999999999988 49999999999999999999999999866554 3467999999999999
Q ss_pred hhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCC--CCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCE
Q 013008 205 MGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQP--GKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGAL 282 (451)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~--~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~l 282 (451)
+++++.++...++.++.|..|++...++||..+|++.++. ++++|||+||++|+||.++++++||..|+++|+++|++
T Consensus 163 lgals~~~~s~y~~~~~p~~p~v~~~~ynd~t~l~k~~~~h~~~IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl 242 (433)
T KOG1401|consen 163 LGALSVTGNSKYGLPFDPIAPDVVTAEYNDSTALEKLFESHKGEIAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVL 242 (433)
T ss_pred hhHHHhhcccccCCCCCCCCCceeecccCCHHHHHHHHHhCCCceEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCce
Confidence 9999999888888888899999999999999999999983 46999999999999999999999999999999999999
Q ss_pred EEEeccccCCCcccccccccccCCCcceeeecccccCCcccccccccHHHHhhccCCCc---cCCCCCcHHHHHHHHHHH
Q 013008 283 LVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINYGDH---GSTFAGSPLVCNAAIAVL 359 (451)
Q Consensus 283 lI~DEv~tg~gr~G~~~~~~~~~~~pdi~t~sK~lg~G~~iG~v~~~~~i~~~~~~~~~---~~t~~~~~~~~aaa~aal 359 (451)
||+|||+|||||+|..|++++++++|||.|++|.|+||+|+|++++++++++.+.+..+ ++||++||++|.++..+|
T Consensus 243 ~I~DEV~tG~gR~g~~~a~e~~~~~PDI~t~aK~L~gGlPigA~~v~~kV~~~i~~~~~l~hg~Tf~gnpLacsa~~~~l 322 (433)
T KOG1401|consen 243 LIFDEVQTGLGRLGYGWAQEYFGVTPDITTVAKPLGGGLPIGATGVRDKVAEMISPGDHLYHGGTFSGNPLACSAGIKVL 322 (433)
T ss_pred EEeehhhhCccccchHHHHHHhCcCCcceeehhhccCCceeEEEeehHHHHhhcCCCCccccCcccCCChhhhhHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999988755 999999999999999999
Q ss_pred HHhcChHHHHH--------------HHhCCC-CcceecccceeEEEEecCChHHHHHHHHHCCceeeecCCC---CEEEE
Q 013008 360 DKISNPAFLAS--------------KLARNP-HVKDVRGLGLIIGIEFDVSATPVVDACRDSGLLVLTAGKG---NVVRL 421 (451)
Q Consensus 360 ~~~~~~~~~~~--------------~~~~~~-~~~~v~g~G~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~---~~iri 421 (451)
+.+.+++++++ ...+.+ .+...+++|+++++.+......+.+...+.|.++.+.+.+ ..+|+
T Consensus 323 ~~l~~~e~~k~vs~~~k~L~~~l~e~~~~~~~~i~g~~grgl~ig~~~~~p~~~~~d~~~~~~ll~~~~~~~~~~~gv~i 402 (433)
T KOG1401|consen 323 DELKDPETLKNVSKIGKELRKLLDEYLKKTPNSICGGVGRGLVIGFEFEGPVYKFADAAREQGLLILTLGKGLLEEGVRI 402 (433)
T ss_pred HHHcCHHHHHHHHHHHHHHHHHHHHHhccCCCceeeeeeeEEEEEEEEeechhhhhhhhhhhhHHHHHHhcccccceEEE
Confidence 99999888877 223344 2333478999999988666666777777777766655431 34788
Q ss_pred eC--CCC--CCHHHHHHHHHHHHHHHHHHh
Q 013008 422 VP--PLI--ISEQELDQAVEILCKTLPVLD 447 (451)
Q Consensus 422 ~~--~~~--~t~e~i~~~l~~l~~~l~~~~ 447 (451)
.| .++ +++|.++++++++.+.+.++.
T Consensus 403 ~P~~~l~~~~~~E~i~~~l~i~~~~l~~~~ 432 (433)
T KOG1401|consen 403 APIYLLTVEHTPEVIQRLLTILEKVLSALN 432 (433)
T ss_pred eccccccccCcHHHHHHHHHHHHHHHHHhc
Confidence 87 343 449999999999999988763
No 32
>PRK07036 hypothetical protein; Provisional
Probab=100.00 E-value=8.7e-66 Score=522.28 Aligned_cols=363 Identities=29% Similarity=0.488 Sum_probs=311.7
Q ss_pred CceEEEeecccEEEecCCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccCC--CCCHHHHHHHHHHhhccC--C
Q 013008 80 APVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNM--YYSIPQIELAKRLVACSF--A 155 (451)
Q Consensus 80 ~p~~~~~~~G~~l~d~~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~--~~~~~~~~l~~~l~~~~~--~ 155 (451)
.|+++++++|+|+||.|||+||||.+++++.++||+||+|.+|+.+|++++.+.+.. ..++...+|+++|++..+ .
T Consensus 33 ~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~ 112 (466)
T PRK07036 33 GSLVIVEAEGIYVTDADGRRYLDGIGGMWCVNVGYGREEMADAIADQARRLPYYTPFGDMTNAPAAELAAKLAELAPGDL 112 (466)
T ss_pred CCceEEeCceeEEEECCCCEEEECcccHHhhcCCCCCHHHHHHHHHHHHhCcccccccccCCHHHHHHHHHHHHhCCCCc
Confidence 488999999999999999999999999999999999999999999999986554332 567789999999999885 6
Q ss_pred CeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCC-
Q 013008 156 DRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGN- 234 (451)
Q Consensus 156 e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d- 234 (451)
++|+|++||+||++.|+|+||.|+..++.. +|.+||.++++|||++.+++++++...++..|.+..+++.++++++
T Consensus 113 ~~v~f~~sGseAve~AlklAr~~~~~~g~t---~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~p~~ 189 (466)
T PRK07036 113 NHVFLTTGGSTAVDSALRFVHYYFNVRGRP---AKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPNP 189 (466)
T ss_pred CEEEEeCCchHHHHHHHHHHHHHHHhcCCC---CccEEEEEcCccCCccHhhhcccCCCcccccccCCCCCcEEecCCcc
Confidence 799999999999999999999997654432 4789999999999999999888877666656666555555554332
Q ss_pred ----------------HHHHHHhcC---CCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcc
Q 013008 235 ----------------IEATRKLIQ---PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRT 295 (451)
Q Consensus 235 ----------------~~~le~~l~---~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~ 295 (451)
++.+++.+. ++++++||+||+++++|+++|+++||++|+++|++||+++|+|||+|||||+
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGfGRt 269 (466)
T PRK07036 190 YRRPAGMSEAAFCDFLVDEFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGRL 269 (466)
T ss_pred cccccCCChHHHHHHHHHHHHHHHHHcCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcC
Confidence 244555553 4689999999999999999999999999999999999999999999999999
Q ss_pred ccccccc-ccCCCcceeeecccccCC-cccccccccHHHHhhccC-------CCccCCCCCcHHHHHHHHHHHHHhcChH
Q 013008 296 GYLWAHE-HYGIFPDIMTLAKPLAGG-LPIGAALVTEKVASAINY-------GDHGSTFAGSPLVCNAAIAVLDKISNPA 366 (451)
Q Consensus 296 G~~~~~~-~~~~~pdi~t~sK~lg~G-~~iG~v~~~~~i~~~~~~-------~~~~~t~~~~~~~~aaa~aal~~~~~~~ 366 (451)
|++|+++ ++|+.|||+|+||+++|| +|+|++++++++++.+.. ..+++||++||++|+|++++|+++++++
T Consensus 270 G~~~~~~~~~gv~PDivt~gK~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~Le~i~~~~ 349 (466)
T PRK07036 270 GHFFASEAVFGIQPDIITFAKGLTSGYQPLGAVIISERLLDVISGPNAKGNVFTHGFTYSGHPVACAAALKNIEIMEREG 349 (466)
T ss_pred chhhhhhhhcCCCCCEEEEccccccCccccEEEEEcHHHHHHHhcccCcCcccccCCCCCCCHHHHHHHHHHHHHHHhCC
Confidence 9988887 789999999999999999 599999999999998752 2467899999999999999999998777
Q ss_pred HHHH-------------HHhCCCCcceecccceeEEEEecC-------------ChHHHHHHHHHCCceeeecCCCCEEE
Q 013008 367 FLAS-------------KLARNPHVKDVRGLGLIIGIEFDV-------------SATPVVDACRDSGLLVLTAGKGNVVR 420 (451)
Q Consensus 367 ~~~~-------------~~~~~~~~~~v~g~G~~~~~~~~~-------------~~~~~~~~l~~~Gv~~~~~~~~~~ir 420 (451)
++++ .++++|.+.+++|.|+|++++|.. ....+.+.|+++||++.+.+ +.+|
T Consensus 350 l~~~~~~~g~~l~~~L~~l~~~~~v~~vrG~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~--~~~~ 427 (466)
T PRK07036 350 LCEHVREVGPYFEERLASLRELPLVGDVRGDHLMACVECVADKGSKALLPEDIAIGQRIDRHCQERGLLVRPLE--HLCV 427 (466)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCEEEEEeeceEEEEEEccCccccCCCCchhHHHHHHHHHHHHCCcEEeecC--CEEE
Confidence 6666 124578888999999999999931 02457888999999998764 6799
Q ss_pred EeCCCCCCHHHHHHHHHHHHHHHHHHh
Q 013008 421 LVPPLIISEQELDQAVEILCKTLPVLD 447 (451)
Q Consensus 421 i~~~~~~t~e~i~~~l~~l~~~l~~~~ 447 (451)
++||+++|++|||+++++|+++++++.
T Consensus 428 l~Ppl~it~~~id~~~~~l~~al~~~~ 454 (466)
T PRK07036 428 LSPPLIITRAQIDEIVAILRAAIEETA 454 (466)
T ss_pred EeCCCcCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999997763
No 33
>PLN00144 acetylornithine transaminase
Probab=100.00 E-value=8.1e-66 Score=512.34 Aligned_cols=363 Identities=80% Similarity=1.273 Sum_probs=325.1
Q ss_pred EEeecccEEEecCCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHhhccCCCeEEecCC
Q 013008 84 LASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNT 163 (451)
Q Consensus 84 ~~~~~G~~l~d~~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~e~v~~~~s 163 (451)
+++++|+|+||.||++||||.+++++.+|||+||+|.+|+.+|+++..+....+.++...+|+++|++..+.++|+|++|
T Consensus 1 ~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~v~f~~s 80 (382)
T PLN00144 1 FVSGKGCKLYDVEGKEYLDMAAGIAVNALGHGDPDWVKAVAEQAGTLAHVSNVYHTIPQVELAKRLVASSFADRVFFCNS 80 (382)
T ss_pred CeeeeccEEEeCCCCEEEECCcCHHhccCCCCCHHHHHHHHHHHHhcCCccccccCHHHHHHHHHHHhcCCCCeEEEeCC
Confidence 36899999999999999999999999999999999999999999987665555567789999999999888889999999
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCC----CCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHH
Q 013008 164 GTEANEAAIKFARKFQRHSNPDSK----EPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATR 239 (451)
Q Consensus 164 G~eA~~~al~~a~~~~~~~~~~~~----~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le 239 (451)
|+||++.|+|+||.+++.++.... ..+.+||.++++|||++.+++++++...++..+.|..+++.++|+||+++|+
T Consensus 81 GseA~e~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~ 160 (382)
T PLN00144 81 GTEANEAAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTFVEYGNLEAAR 160 (382)
T ss_pred cHHHHHHHHHHHHHHHhccCCCCccccccccceEEEECCCcccccHHHHhcCCCccccccCCCCCCCeEEeCCCCHHHHH
Confidence 999999999999999875432210 0157899999999999999999888776666777778889999999999999
Q ss_pred HhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccccccCCCcceeeecccccC
Q 013008 240 KLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAG 319 (451)
Q Consensus 240 ~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~t~sK~lg~ 319 (451)
+++..+++++||+||+++++|+.+++++|+++|+++|++||+++|+||||+||||+|.+++++++++.||++||||++++
T Consensus 161 ~~~~~~~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~PDi~t~sK~l~~ 240 (382)
T PLN00144 161 KLIQKGKTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRTGYLWAHEAYGVEPDIMTLAKPLAG 240 (382)
T ss_pred HhcCCCCeEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchHhhhhhcCCCCCEEEecccccC
Confidence 99986789999999999998998999999999999999999999999999999999998888889999999999999999
Q ss_pred CcccccccccHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH--------------HHhCCCCcceecccc
Q 013008 320 GLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS--------------KLARNPHVKDVRGLG 385 (451)
Q Consensus 320 G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~--------------~~~~~~~~~~v~g~G 385 (451)
|+|+|++++++++++.+....+.+||++||++|+++.++|+.++++++.++ +++++|.+..+++.|
T Consensus 241 G~pig~v~~~~~~~~~~~~~~~~~T~~~~pl~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~vrg~G 320 (382)
T PLN00144 241 GLPIGAVLVTEKVASAINPGDHGSTFAGGPLVCNAALAVLDKISKPGFLASVAKKGEYLRELLRRKLGGNPHVKEVRGVG 320 (382)
T ss_pred CcceEEEEEcHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhhCCCceeeecCc
Confidence 999999999999999997777889999999999999999999987766555 345567778899999
Q ss_pred eeEEEEecCChHHHHHHHHHCCceeeecCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 013008 386 LIIGIEFDVSATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTLPVL 446 (451)
Q Consensus 386 ~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~ 446 (451)
+++|++++.....+++.++++||++.|++.++.+|+.|+++++++++++++++|++++.++
T Consensus 321 ~~~~l~l~~~~~~~~~~~~~~Gv~i~~~~~~~~lrl~p~~~~~~~~i~~~~~~l~~~l~~~ 381 (382)
T PLN00144 321 LLVGIQLDVPAGPLVDACRDSGLLVLTAGKGDVVRLVPPLVISEAELEQAVEILADCLPAL 381 (382)
T ss_pred eEEEEEecCccHHHHHHHHHCCeEEeecCCCCEEEEeCCCccCHHHHHHHHHHHHHHHHhc
Confidence 9999999656778999999999999987645899999999999999999999999999764
No 34
>PRK12403 putative aminotransferase; Provisional
Probab=100.00 E-value=3.1e-65 Score=517.93 Aligned_cols=380 Identities=26% Similarity=0.436 Sum_probs=313.8
Q ss_pred hHHHHHHHHhcccccCC-------CCceEEEeecccEEEecCCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhccccc
Q 013008 62 NKEVMEAEKKLLVGTYN-------RAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVS 134 (451)
Q Consensus 62 ~~~~~~~~~~~~~~~~~-------~~p~~~~~~~G~~l~d~~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~ 134 (451)
.+++.+.+.++.++++. +.|+++++++|+|+||.||++||||.+++++.+|||+||+|++|+.+|++++.+.+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~hp~v~~A~~~q~~~~~~~~ 90 (460)
T PRK12403 11 TRDYQAADAAHHIHAFLDQKALNAEGPRVMVRGEGLHLWDNDGKRYLDGMSGLWCTNLGYGRKDLAAAAARQMEQLPYYN 90 (460)
T ss_pred hHHHHHhhhcccccccccccccccCCCceEEeceeeEEEeCCCCEEEECchhHHhhcCCCCCHHHHHHHHHHHHhCCCee
Confidence 44444444444444333 24899999999999999999999999999999999999999999999999876553
Q ss_pred CC--CCCHHHHHHHHHHhhccC--CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhc
Q 013008 135 NM--YYSIPQIELAKRLVACSF--ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALAL 210 (451)
Q Consensus 135 ~~--~~~~~~~~l~~~l~~~~~--~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~ 210 (451)
.. +.++...+|+++|++.++ .++++|++||+|||+.|+|++|.|+...+.+ .+..|+.+..+|||++.+++++
T Consensus 91 ~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e~AiklAr~~~~~~g~~---~r~~ii~~~~~yHG~t~~~~s~ 167 (460)
T PRK12403 91 MFFHTTHPAVIELSELLFSLLPGHYSHAIYTNSGSEANEVLIRTVRRYWQVLGKP---QKKIMIGRWNGYHGSTLAATAL 167 (460)
T ss_pred cccccCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhhCCC---CCcEEEEECCCcCcccHhhhhc
Confidence 32 356779999999999987 6899999999999999999999997543322 3567889999999999999998
Q ss_pred cCCCCcCCCCcCCCCCeeEeeCCC-----------------HHHHHHhcC---CCCeEEEEEccccCCCCccccCHHHHH
Q 013008 211 TSKEHYRSPFEPVMPGVNFVEYGN-----------------IEATRKLIQ---PGKTAAVFVEPIQGEGGIYSATKEFLQ 270 (451)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~d-----------------~~~le~~l~---~~~~aavi~ep~~~~~G~~~~~~~~l~ 270 (451)
++...++. +.+..+++..+|+++ +++|++.+. .+++++||+||+++++|+++++++||+
T Consensus 168 s~~~~~~~-~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~ 246 (460)
T PRK12403 168 GGMKFMHE-MGGLIPDVAHIDEPYWYANGGELTPAEFGRRAALQLEEKILELGAENVAGFVAEPFQGAGGMIFPPESYWP 246 (460)
T ss_pred CCCccccc-cCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHHhCCCceEEEEEccccCCCCCccCCHHHHH
Confidence 87554332 334445565554331 356766653 367999999999999999999999999
Q ss_pred HHHHHHHHhCCEEEEeccccCCCcccccccccccCCCcceeeecccccCC-cccccccccHHHHhhccC----CCccCCC
Q 013008 271 FLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAGG-LPIGAALVTEKVASAINY----GDHGSTF 345 (451)
Q Consensus 271 ~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~t~sK~lg~G-~~iG~v~~~~~i~~~~~~----~~~~~t~ 345 (451)
+|+++|++||++||+|||+|||||+|++|+++++|+.||++|+||+++|| +|+|++++++++++.+.. ..+++||
T Consensus 247 ~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~e~~gv~PDiv~~gK~lggG~~Piga~v~~~~i~~~~~~~~~~~~~~~T~ 326 (460)
T PRK12403 247 EIQRICRQYDVLLCADEVIGGFGRTGEWFAHEHFGFEPDTLSIAKGLTSGYVPMGGLVLSKRIAEALVEQGGVFAHGLTY 326 (460)
T ss_pred HHHHHHHHcCCEEEEeccccCCCcCchhhhhhhcCCCCCeEEEcccccccccceEEEEECHHHHHHHhcCCCccccCCCC
Confidence 99999999999999999999999999999999999999999999999999 599999999999998743 1378899
Q ss_pred CCcHHHHHHHHHHHHHhcChHHHHH---------------HHhCCCCcceecccceeEEEEecCC-------------hH
Q 013008 346 AGSPLVCNAAIAVLDKISNPAFLAS---------------KLARNPHVKDVRGLGLIIGIEFDVS-------------AT 397 (451)
Q Consensus 346 ~~~~~~~aaa~aal~~~~~~~~~~~---------------~~~~~~~~~~v~g~G~~~~~~~~~~-------------~~ 397 (451)
++||++|+|++++|++++++++.++ +.+++|.+.++||.|+|+++++..+ ..
T Consensus 327 ~gnPl~~Aaala~L~~i~~~~l~~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~ 406 (460)
T PRK12403 327 SGHPVAAAVAIANLKALRDEGVVTRVKDDTGPYLQRCLREVFGDHPLVGEVQGAGLVAALQFAEDKATRKRFANENDLAW 406 (460)
T ss_pred CCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhcCCCEEeEeecceEEEEEEccCccccccccchhHHHH
Confidence 9999999999999999977654433 3356788899999999999999311 12
Q ss_pred HHHHHHHHCCceeeecCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHh
Q 013008 398 PVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTLPVLD 447 (451)
Q Consensus 398 ~~~~~l~~~Gv~~~~~~~~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~~ 447 (451)
.+...|+++|+++.+.+ +.+|++||+++|++|+++++++|+++++++.
T Consensus 407 ~~~~~~~~~Gll~~~~~--~~~~l~Ppl~it~~eid~~~~~l~~al~~~~ 454 (460)
T PRK12403 407 RCRTIGFEEGVIIRSTL--GRMIMAPALVAGRAEIDELVDKTRIAVDRTA 454 (460)
T ss_pred HHHHHHHhCCEEEEecC--CEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 34566789999998654 5689999999999999999999999998874
No 35
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=100.00 E-value=3.6e-65 Score=516.36 Aligned_cols=358 Identities=32% Similarity=0.543 Sum_probs=306.6
Q ss_pred CCceEEEeecccEEEecCCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccC-CCCCHHHHHHHHHHhhccCC--
Q 013008 79 RAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSN-MYYSIPQIELAKRLVACSFA-- 155 (451)
Q Consensus 79 ~~p~~~~~~~G~~l~d~~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~~~-- 155 (451)
+.|+++++++|+|+||.||++||||.+++++.++||+||+|.+|+.+|+++..+.+. .+.++...+|+++|++..+.
T Consensus 20 ~~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~ 99 (442)
T TIGR00709 20 KLPTAFAKAQGCWVTDVEGKEYLDFLAGAGTLALGHNHPNMKQKILDYLQSGLPLHTLDLTTPLKDAFIEALLNIIPKRK 99 (442)
T ss_pred CCCceEEeccccEEEeCCCCEEEEccccHhhhcCCCCCHHHHHHHHHHHHhccCccccccCcHHHHHHHHHHHHhCCCcC
Confidence 468999999999999999999999999999999999999999999999988554322 35677799999999998852
Q ss_pred --Ce-EEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeC
Q 013008 156 --DR-VFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEY 232 (451)
Q Consensus 156 --e~-v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (451)
.+ +++++||+||++.|+|+||.||+ |.+||.++++|||++.+++++++...++.++.+..+++.++++
T Consensus 100 ~~~~~~f~~~sGsEA~e~AlklAr~~tg---------r~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~ 170 (442)
T TIGR00709 100 MDYKLQFPGPSGADAVEAAIKLAKTYTG---------RTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPY 170 (442)
T ss_pred CCccEEEeCCCHHHHHHHHHHHHHHhcC---------CCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCC
Confidence 24 55569999999999999999974 7889999999999999999988765555555566666666665
Q ss_pred CCH-----------------HHHHHhcC-----CCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEecccc
Q 013008 233 GNI-----------------EATRKLIQ-----PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQC 290 (451)
Q Consensus 233 ~d~-----------------~~le~~l~-----~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t 290 (451)
++. +.+++.++ .+++++||+||+++++|.++++++||++|+++|++||++||+|||+|
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~t 250 (442)
T TIGR00709 171 PHEYRCPFGIGGEAGSNASIEYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQA 250 (442)
T ss_pred CccccccccCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc
Confidence 431 22344442 25799999999999999999999999999999999999999999999
Q ss_pred CCCcccccccccccCCCcceeeecccccCCcccccccccHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH
Q 013008 291 GLGRTGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS 370 (451)
Q Consensus 291 g~gr~G~~~~~~~~~~~pdi~t~sK~lg~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~ 370 (451)
||||+|++|+++++++.||++|+||++++|+|+|+++++++ ++.+....+.+||++||++|+|++++|+.++++++.++
T Consensus 251 GfGRtG~~~a~~~~gv~PDiv~~gK~l~~G~Pigav~~~~~-~~~~~~~~~~~T~~gnpla~aaa~a~L~~i~~~~l~~~ 329 (442)
T TIGR00709 251 GFGRSGTMFAFEHAGIEPDFVVMSKAVGGGLPLAVLLIAPE-FDAWQPAGHTGTFRGNQLAMVTGTEALNYWKDDNLAQN 329 (442)
T ss_pred CCCCCCchhHHHHcCCCCcEEEEcccccCCcccEEEEEchH-HhccCCCcCCCCCCcCHHHHHHHHHHHHHHHhcCHHHH
Confidence 99999999999999999999999999999999999999988 56665556789999999999999999999887766655
Q ss_pred --------------HHhCCCCcceecccceeEEEEecCC----------------hHHHHHHHHHCCceeeecCC-CCEE
Q 013008 371 --------------KLARNPHVKDVRGLGLIIGIEFDVS----------------ATPVVDACRDSGLLVLTAGK-GNVV 419 (451)
Q Consensus 371 --------------~~~~~~~~~~v~g~G~~~~~~~~~~----------------~~~~~~~l~~~Gv~~~~~~~-~~~i 419 (451)
+.+++|.+.++||.|+|+++++..+ ...+...|+++|+++.+.+. ++++
T Consensus 330 ~~~~g~~l~~~L~~l~~~~~~v~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~~~l 409 (442)
T TIGR00709 330 AQERGERITSFLDDMIKEHPCIGNVRGRGLMQGIMIVDERQSKDATGAYPRDCELAAAIQGACFENGLLLETGGREGEVF 409 (442)
T ss_pred HHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEEccCcccccccccCCcchHHHHHHHHHHHHCCeEEeecCCCCCEE
Confidence 3457888899999999999999311 34577788999999987653 5899
Q ss_pred EEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 013008 420 RLVPPLIISEQELDQAVEILCKTLPVL 446 (451)
Q Consensus 420 ri~~~~~~t~e~i~~~l~~l~~~l~~~ 446 (451)
|+.||+++|++|++++++++++++.++
T Consensus 410 ~~~Ppl~it~~ei~~~~~~l~~~l~~~ 436 (442)
T TIGR00709 410 RLLCPITIDQEECEEGISRFKQAVEEA 436 (442)
T ss_pred EEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999876
No 36
>PRK06541 hypothetical protein; Provisional
Probab=100.00 E-value=9.2e-65 Score=513.96 Aligned_cols=381 Identities=35% Similarity=0.579 Sum_probs=320.7
Q ss_pred HHHHHHHhcccccCCC-------CceEEEeecccEEEecCCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccC-
Q 013008 64 EVMEAEKKLLVGTYNR-------APVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSN- 135 (451)
Q Consensus 64 ~~~~~~~~~~~~~~~~-------~p~~~~~~~G~~l~d~~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~- 135 (451)
.+.+.+.++.+++|.. .|+++++++|+||||.||++||||.+++++.+|||+||+|.+|+.+|++++.+...
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~q~~~~~~~~~~ 90 (460)
T PRK06541 11 DLQALAKRHLWMHFTRHGAYIDAPVPVIVRGEGCYIWDDRGKRYLDGLAGLFVVQVGHGRAELAEAAAKQAGTLAFFPLW 90 (460)
T ss_pred HHHHHhhcccccCccCccccccCCCceEEeCcccEEEeCCCCEEEECCccHHhccCCCCCHHHHHHHHHHHhhCcCcccc
Confidence 3444445566555433 26789999999999999999999999999999999999999999999998765432
Q ss_pred CCCCHHHHHHHHHHhhccC--CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCC
Q 013008 136 MYYSIPQIELAKRLVACSF--ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK 213 (451)
Q Consensus 136 ~~~~~~~~~l~~~l~~~~~--~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~ 213 (451)
.+.++...+|+++|++..+ .++|+|++||+||++.|+|+||.|++..+.+ +|.+||.++++|||++.+++++++.
T Consensus 91 ~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~---~r~~ii~~~~~yHG~t~~a~s~~~~ 167 (460)
T PRK06541 91 SYAHPPAIELAERLAALAPGDLNRVFFTTGGSEAVESAWKLAKQYFKLTGKP---GKHKVISRAIAYHGTTQGALAITGL 167 (460)
T ss_pred ccCCHHHHHHHHHHHHhCCCCcCEEEEcCCcHHHHHHHHHHHHHHHHhcCCC---CccEEEEEcCcccCcchhhhcCcCC
Confidence 4567789999999999875 6799999999999999999999997543322 4789999999999999999998877
Q ss_pred CCcCCCCcCCCCCeeEeeCCC------------------HHHHHHhcC---CCCeEEEEEccccCCCCccccCHHHHHHH
Q 013008 214 EHYRSPFEPVMPGVNFVEYGN------------------IEATRKLIQ---PGKTAAVFVEPIQGEGGIYSATKEFLQFL 272 (451)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~d------------------~~~le~~l~---~~~~aavi~ep~~~~~G~~~~~~~~l~~l 272 (451)
+.++..+.|..+++..+|+++ ++.++++++ ++++++||+||+++++|.++++++||++|
T Consensus 168 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l 247 (460)
T PRK06541 168 PAFKAPFEPLVPGGFRVPNTNFYRAPELGDDPEAFGRWAADRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERV 247 (460)
T ss_pred hhhccccCCCCCCcEEeCCCccccccccCCCHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHH
Confidence 666666667677776665332 367888875 46899999999999999999999999999
Q ss_pred HHHHHHhCCEEEEeccccCCCcccccccccccCCCcceeeecccccCCc-ccccccccHHHHhhccCC----CccCCCCC
Q 013008 273 RDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAGGL-PIGAALVTEKVASAINYG----DHGSTFAG 347 (451)
Q Consensus 273 ~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~t~sK~lg~G~-~iG~v~~~~~i~~~~~~~----~~~~t~~~ 347 (451)
+++|++||++||+|||||||||+|.+|+++++++.||++||||++++|+ |+|++++++++++.+... .+++||++
T Consensus 248 ~~lc~~~g~llI~DEV~tGfGR~G~~~a~~~~gv~PDivt~gK~l~~G~~pigav~~~~~i~~~~~~~~~~~~~~~T~~g 327 (460)
T PRK06541 248 REICDRYDVLLVSDEVICAFGRLGEMFGCERFGYVPDIITCAKGITSGYSPLGAMIASDRLFEPFLDGPTMFLHGYTFGG 327 (460)
T ss_pred HHHHHHcCCEEEEechhhCCCcCchhhhhhhcCCCCCEEEecccccCCccceeEEEEcHHHHHHhhcCCCccccCCCCCC
Confidence 9999999999999999999999999999999999999999999999996 999999999999887532 36789999
Q ss_pred cHHHHHHHHHHHHHhcChHHHHH-----------H--HhCCCCcceecccceeEEEEecCC---------------h-HH
Q 013008 348 SPLVCNAAIAVLDKISNPAFLAS-----------K--LARNPHVKDVRGLGLIIGIEFDVS---------------A-TP 398 (451)
Q Consensus 348 ~~~~~aaa~aal~~~~~~~~~~~-----------~--~~~~~~~~~v~g~G~~~~~~~~~~---------------~-~~ 398 (451)
||+++++++++|+.++++++.++ + +..+|.+..+++.|+|++++|..+ . ..
T Consensus 328 np~~~aaala~l~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~v~~vrg~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~ 407 (460)
T PRK06541 328 HPVSAAVALANLDIFEREGLLDHVRDNEPAFRATLEKLLDLPIVGDVRGDGYFYGIELVKDKATKETFTDDESERLLRGF 407 (460)
T ss_pred CHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecceEEEEEEecCcccccCCcchhhhhhHHHH
Confidence 99999999999999877766655 1 123677788999999999998211 0 24
Q ss_pred HHHHHHHCCceeeecCC-CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHh
Q 013008 399 VVDACRDSGLLVLTAGK-GNVVRLVPPLIISEQELDQAVEILCKTLPVLD 447 (451)
Q Consensus 399 ~~~~l~~~Gv~~~~~~~-~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~~ 447 (451)
+...|+++||++.+.+. .+++||+||+++|++|||+++++|++++.++.
T Consensus 408 ~~~~l~~~Gi~~~~~~~g~~~lrl~Ppl~~t~~~id~~~~~l~~~l~~~~ 457 (460)
T PRK06541 408 LSPALFEAGLYCRADDRGDPVVQLAPPLISGQEEFDEIEQILRSVLTEAW 457 (460)
T ss_pred HHHHHHhCCeEEEecCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 67888999999987532 27899999999999999999999999998764
No 37
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=100.00 E-value=7e-65 Score=512.59 Aligned_cols=383 Identities=25% Similarity=0.361 Sum_probs=324.3
Q ss_pred hhhccccccchhhhccCCCCCCcchHHHHHHHHhcccccCCCCceEEEeecccEEEecCCCEEEeeccCcccccCCCCCH
Q 013008 38 VAAASVNVEVNDAARGSAGGLGRNNKEVMEAEKKLLVGTYNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDA 117 (451)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~G~~l~d~~G~~~iD~~~~~~~~~lG~~~p 117 (451)
+...|.++ +++|.+++|||++++.+.+ .....+.|+++++++|+|+||.||++||||.+++++.++||+||
T Consensus 2 ~~~~s~~~-~~~a~~~~p~g~~~~~~~~--------~~~~~~~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p 72 (428)
T PRK12389 2 NFTKSEAL-HQEALEHIVGGVNSPSRSY--------KAVGGGAPVVMERGKGAYFYDVDGNKYIDYLAAYGPIITGHAHP 72 (428)
T ss_pred CChhhHHH-HHHHHhhCCCCCCCccccc--------cccCCCCCeEEEeccCCEEEeCCCCEEEEccccccccccCCCCH
Confidence 45678888 9999999999998766532 11122578999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcccccCCCCCHHHHHHHHHHhhccC-CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEE
Q 013008 118 DWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSF-ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSF 196 (451)
Q Consensus 118 ~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~ 196 (451)
+|.+|+.+|++++.+ ..+.++...+|+++|++..+ .++++|++||+||++.|+|+||.|++ |.+||.+
T Consensus 73 ~v~~ai~~q~~~~~~--~~~~~~~~~~la~~l~~~~p~~~~v~f~~sGseA~e~AlklAr~~tg---------r~~ii~~ 141 (428)
T PRK12389 73 HITKAITEAAENGVL--YGTPTELEIEFAKMLKEAIPSLEKVRFVNSGTEAVMTTIRVARAYTG---------RTKIIKF 141 (428)
T ss_pred HHHHHHHHHHHhCCc--cCCCCHHHHHHHHHHHHhCCCCcEEEEeCCHHHHHHHHHHHHHHhhC---------CCEEEEE
Confidence 999999999998654 23567779999999999875 78999999999999999999999974 8899999
Q ss_pred cCCccCChhhhhhccCCCCcC------CCCc-CCCCCeeEeeCCCHHHHHHhcC--CCCeEEEEEccccCCCCccccCHH
Q 013008 197 TNSFHGRTMGALALTSKEHYR------SPFE-PVMPGVNFVEYGNIEATRKLIQ--PGKTAAVFVEPIQGEGGIYSATKE 267 (451)
Q Consensus 197 ~~~yhg~~~~~~~~~~~~~~~------~~~~-~~~~~~~~~~~~d~~~le~~l~--~~~~aavi~ep~~~~~G~~~~~~~ 267 (451)
+++|||++.++++.++..... .++. +..+++..+|+||++.++++++ .+++++||+||+++++|.++|+++
T Consensus 142 ~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~vaavi~EPv~g~~G~~~p~~~ 221 (428)
T PRK12389 142 AGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVPFNDIEALKEALDKWGDEVAAVLVEPIVGNFGIVEPKPG 221 (428)
T ss_pred CCCcCCChHHHHHhcCCcccccCCCCCCCCCCcccCceEEcCCCCHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHH
Confidence 999999999998877543211 1111 2335778889999999999996 457999999999999999999999
Q ss_pred HHHHHHHHHHHhCCEEEEeccccCCCcccccccccccCCCcceeeecccccCCcccccccccHHHHhhccC---CCccCC
Q 013008 268 FLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINY---GDHGST 344 (451)
Q Consensus 268 ~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~t~sK~lg~G~~iG~v~~~~~i~~~~~~---~~~~~t 344 (451)
||++|+++|++||++||+|||+||| |+|.+++++++|+.||++|+||+++||+|+|++++++++++.+.+ ..+.+|
T Consensus 222 yl~~l~~lc~~~g~llI~DEV~tG~-Rt~~~~a~~~~gv~PDivt~gK~lggG~Pi~av~~~~~i~~~~~~~~~~~~~~T 300 (428)
T PRK12389 222 FLEAVNELAHEAGALVIYDEVITAF-RFMYGGAQDLLGVEPDLTALGKIIGGGLPIGAYGGRKDIMEQVAPLGPAYQAGT 300 (428)
T ss_pred HHHHHHHHHHHcCCEEEEEcccccc-ccCcchhhHHhCCCCCeeeechhhcCCCceeEEeEHHHHHhhhccCCCcccccC
Confidence 9999999999999999999999999 998888888999999999999999999999999999999998853 357889
Q ss_pred CCCcHHHHHHHHHHHHHhcChHHHHH--------------HHhCCCCccee-cccceeEEEEecC---------------
Q 013008 345 FAGSPLVCNAAIAVLDKISNPAFLAS--------------KLARNPHVKDV-RGLGLIIGIEFDV--------------- 394 (451)
Q Consensus 345 ~~~~~~~~aaa~aal~~~~~~~~~~~--------------~~~~~~~~~~v-~g~G~~~~~~~~~--------------- 394 (451)
|++||++|+|++++|+++++++++++ +.+++|.+..+ ++.| ++++++..
T Consensus 301 ~~gnpl~~Aaala~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~v~r~~g-~~gi~~~~~~~~~~~~~~~~~~~ 379 (428)
T PRK12389 301 MAGNPASMAAGIACLEVLQQEGVYEKLDRLGAMLEEGILEAAEKHGITITINRLKG-ALTVYFTDEKVTNYDQAERSDGE 379 (428)
T ss_pred CccCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCc-EEEEEEeCCCCCChhhhcccCHH
Confidence 99999999999999999988777666 23446755555 7777 66787721
Q ss_pred ChHHHHHHHHHCCceeeecCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 013008 395 SATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTLPV 445 (451)
Q Consensus 395 ~~~~~~~~l~~~Gv~~~~~~~~~~iri~~~~~~t~e~i~~~l~~l~~~l~~ 445 (451)
....+.+.|+++||++.+.+. +. +.|++++|+|||+++++++++++++
T Consensus 380 ~~~~~~~~l~~~Gv~~~~~~~-~~--~~~~l~~t~e~id~~~~~l~~~l~~ 427 (428)
T PRK12389 380 AFGKFFKLMLNQGINLAPSKY-EA--WFLTTAHTEEDIEETLEAVDRAFAQ 427 (428)
T ss_pred HHHHHHHHHHHCCcEeecCCC-CC--eeecCCCCHHHHHHHHHHHHHHHHh
Confidence 134678889999999988654 22 4579999999999999999999875
No 38
>PRK06917 hypothetical protein; Provisional
Probab=100.00 E-value=8e-65 Score=513.12 Aligned_cols=367 Identities=34% Similarity=0.553 Sum_probs=310.8
Q ss_pred CCceEEEeecccEEEecCCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccC-CCCCHHHHHHHHHHhhccC--C
Q 013008 79 RAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSN-MYYSIPQIELAKRLVACSF--A 155 (451)
Q Consensus 79 ~~p~~~~~~~G~~l~d~~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~~--~ 155 (451)
+.| ++++++|+|+||.||++||||.+++++.+|||+||+|.+|+.+|++++.+... .+.+++..+|+++|++.++ .
T Consensus 13 ~~p-~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~hp~v~~Ai~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~ 91 (447)
T PRK06917 13 PYP-VISHGKGVYLYDQNGNKYFDGSSGAVTAGIGHGVKEIADAIKEQAEEVSFVYRSQFTSEPAEKLAKKLSDLSPGDL 91 (447)
T ss_pred CCC-eEEeeeeeEEEeCCCCEEEECchhHHhccCCCCCHHHHHHHHHHHhhCcCccccccCCHHHHHHHHHHHHhCCCCC
Confidence 446 58999999999999999999999999999999999999999999998654432 3567778999999999986 5
Q ss_pred CeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEee----
Q 013008 156 DRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVE---- 231 (451)
Q Consensus 156 e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 231 (451)
++++|++||+||++.|+|+|+.|++.++.. +|.+||.++++|||++.+++++++....+..+.|..+++..++
T Consensus 92 ~~v~f~~sGsEAve~AlklAr~~~~~rg~t---~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~ 168 (447)
T PRK06917 92 NWSFFVNSGSEANETAMKIAIQHFQERGIQ---GKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYC 168 (447)
T ss_pred CEEEEeCChHHHHHHHHHHHHHHHHhcCCC---CCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCcc
Confidence 799999999999999999999987554433 5789999999999999999988776544444444433333222
Q ss_pred -------------CCCHHHHHHhcC---CCCeEEEEEccccCC-CCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCc
Q 013008 232 -------------YGNIEATRKLIQ---PGKTAAVFVEPIQGE-GGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGR 294 (451)
Q Consensus 232 -------------~~d~~~le~~l~---~~~~aavi~ep~~~~-~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr 294 (451)
++|++.++++++ .+++++||+||++++ +|+++|+++||++|+++|++||+++|+|||+|||||
T Consensus 169 ~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~tGfGR 248 (447)
T PRK06917 169 YRCPVQKVYPTCQLACATELETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGLGR 248 (447)
T ss_pred cccccCCChHHHHHHHHHHHHHHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhhCcCc
Confidence 123567788876 257999999999985 678899999999999999999999999999999999
Q ss_pred ccccccccccCCCcceeeecccccCCc-ccccccccHHHHhhccCC----CccCCCCCcHHHHHHHHHHHHHhcChHHHH
Q 013008 295 TGYLWAHEHYGIFPDIMTLAKPLAGGL-PIGAALVTEKVASAINYG----DHGSTFAGSPLVCNAAIAVLDKISNPAFLA 369 (451)
Q Consensus 295 ~G~~~~~~~~~~~pdi~t~sK~lg~G~-~iG~v~~~~~i~~~~~~~----~~~~t~~~~~~~~aaa~aal~~~~~~~~~~ 369 (451)
+|++|+++++++.||++|+||+++||+ |+|++++++++++.+... .+++||++||++|+|++++|++++++++.+
T Consensus 249 tG~~~a~~~~gv~PDi~~~gK~l~~G~~Pi~a~~~~~~i~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~~l~~ 328 (447)
T PRK06917 249 TGAMFAMEHWGVEPDIMTLGKGLGAGYTPIAATVVSDRVMEPILRGSRSIMSGHTLSANPLSAATALAVLEYMEKHNLPE 328 (447)
T ss_pred ccchhhHHhcCCCCCEEEeeehhccCCcceEEEEEcHHHHHHHhccCcccccccCCCCCHHHHHHHHHHHHHHHHCCHHH
Confidence 999999999999999999999999995 999999999999988542 367899999999999999999997776665
Q ss_pred H--------------HHhCCCCcceecccceeEEEEecC-------------ChHHHHHHHHHCCceeeecC------CC
Q 013008 370 S--------------KLARNPHVKDVRGLGLIIGIEFDV-------------SATPVVDACRDSGLLVLTAG------KG 416 (451)
Q Consensus 370 ~--------------~~~~~~~~~~v~g~G~~~~~~~~~-------------~~~~~~~~l~~~Gv~~~~~~------~~ 416 (451)
+ +.+++|.+.++||.|+|++++|.. ....+.+.|+++||++.+.+ .+
T Consensus 329 ~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~~g~~~ 408 (447)
T PRK06917 329 KAAEKGEYLIKGLQKVQQQSTIIGDVRGKGLLIGVEFVADKKTKQPFSKSQAVASELISVAAKNGLLLYPAVAGQDGKEG 408 (447)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCEEEEeecceEEEEEEeccCCcCCCCcchhHHHHHHHHHHHhCCcEEEecccccCCCCC
Confidence 5 345678889999999999999831 13467888999999998753 14
Q ss_pred CEEEEeCCCCCCHHHHHHHHHHHHHHHHHHhhc
Q 013008 417 NVVRLVPPLIISEQELDQAVEILCKTLPVLDSN 449 (451)
Q Consensus 417 ~~iri~~~~~~t~e~i~~~l~~l~~~l~~~~~~ 449 (451)
+.+|++||+++|++|||+++++|+++++++.++
T Consensus 409 ~~i~l~Ppl~it~~eid~~~~~l~~~l~~~~~~ 441 (447)
T PRK06917 409 DAVIIAPPMTITYSELDELLSIFAKSVEEMMQK 441 (447)
T ss_pred CEEEEECCCcCCHHHHHHHHHHHHHHHHHHHHh
Confidence 789999999999999999999999999887544
No 39
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=100.00 E-value=7.4e-65 Score=512.70 Aligned_cols=364 Identities=34% Similarity=0.587 Sum_probs=314.3
Q ss_pred CCCceEEEeecccEEEecCCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccC-CCCCHHHHHHHHHHhhccC--
Q 013008 78 NRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSN-MYYSIPQIELAKRLVACSF-- 154 (451)
Q Consensus 78 ~~~p~~~~~~~G~~l~d~~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~~-- 154 (451)
.+.|+++++++|+|+||.||++||||.+++++.+|||+||+|.+|+.+|++++.+.+. ...++...+|+++|++..+
T Consensus 26 ~~~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~~~~~~~~~~~la~~l~~~~p~~ 105 (442)
T PRK13360 26 KKAPRLLVAAKGMYYTTHDGRRVLDGTAGLWCVNAGHGRPEIVEAVRAQAGELDYAPAFQMGHPKAFELANRIAEIAPGG 105 (442)
T ss_pred cCCCceEEeeeeeEEEeCCCCEEEECchhHHHhccCCCCHHHHHHHHHHHHhCCCcccCCcCCHHHHHHHHHHHHhCCCC
Confidence 3568999999999999999999999999999999999999999999999998765433 3567778999999999885
Q ss_pred CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCC
Q 013008 155 ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGN 234 (451)
Q Consensus 155 ~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 234 (451)
.++|+|++||+||++.|+|+||.|++.++.. +|.+||.+.++|||++.+++++++....+..+.+..+++.++|+++
T Consensus 106 ~~~v~f~~sGseA~e~AlklAr~~~~~~g~~---~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~ 182 (442)
T PRK13360 106 LNHVFFTNSGSESVDTALKIALAYHRARGEG---SRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTL 182 (442)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHHHHHhcCCC---CCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCc
Confidence 6899999999999999999999997544322 4778999999999999999998887666666666666666665541
Q ss_pred ------------------HHHHHHhcC---CCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCC
Q 013008 235 ------------------IEATRKLIQ---PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLG 293 (451)
Q Consensus 235 ------------------~~~le~~l~---~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~g 293 (451)
+++|+++++ .+++++||+||+++++|.++++++||++|+++|++||++||+||||||||
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~G 262 (442)
T PRK13360 183 DLARNAFSKGQPEHGAELADELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFG 262 (442)
T ss_pred hhhccccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCC
Confidence 457888885 36799999999999999999999999999999999999999999999999
Q ss_pred cccccccccccCCCcceeeecccccCC-cccccccccHHHHhhccCC-------CccCCCCCcHHHHHHHHHHHHHhcCh
Q 013008 294 RTGYLWAHEHYGIFPDIMTLAKPLAGG-LPIGAALVTEKVASAINYG-------DHGSTFAGSPLVCNAAIAVLDKISNP 365 (451)
Q Consensus 294 r~G~~~~~~~~~~~pdi~t~sK~lg~G-~~iG~v~~~~~i~~~~~~~-------~~~~t~~~~~~~~aaa~aal~~~~~~ 365 (451)
|+|++|+++++++.||++||||+++|| +|+|++++++++++.+... .+++||++||++|++++++|++++++
T Consensus 263 rtG~~~a~~~~gv~PDivt~gK~l~gG~~P~gav~~~~~i~~~~~~~~~~~~~~~~~~T~~g~pl~~aaa~a~L~~l~~~ 342 (442)
T PRK13360 263 RLGAPFAAQYFGVTPDLLTCAKGLTNGAIPMGAVFVSSEIHDAFMQGPEAGIEFFHGYTYSGHPLACAAALATLDLYERE 342 (442)
T ss_pred CCccchhhhhcCCCCceeeeeeccccCccceEEEEEcHHHHHHhhcCCccccccccCCCCCCCHHHHHHHHHHHHHHHhC
Confidence 999999999999999999999999988 8999999999999887532 36789999999999999999999877
Q ss_pred HHHHH-----------HH--hCCCCcceecccceeEEEEecC-------ChHHHHHHHHHCCceeeecCCCCEEEEeCCC
Q 013008 366 AFLAS-----------KL--ARNPHVKDVRGLGLIIGIEFDV-------SATPVVDACRDSGLLVLTAGKGNVVRLVPPL 425 (451)
Q Consensus 366 ~~~~~-----------~~--~~~~~~~~v~g~G~~~~~~~~~-------~~~~~~~~l~~~Gv~~~~~~~~~~iri~~~~ 425 (451)
++.++ +. .+++.+.++||.|+++++++.. .+.++...|+++||++.+.+ +.+||+||+
T Consensus 343 ~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Gl~~~~~l~~~~~~~~~~~~~~~~~l~~~Gvl~~~~~--~~lr~~Ppl 420 (442)
T PRK13360 343 GLLTRAARLAPYWEDALHSLRDAPHVIDIRNLGLVGAVELAPRDGKPGKRAYEVFLKCFEKGLMIRYTG--DILALSPPL 420 (442)
T ss_pred CHHHHHHHHHHHHHHHHHHhhcCCCeeeeeccceEEEEEEecCCCCcchhHHHHHHHHHHCCcEEEecC--CEEEEeCCC
Confidence 66555 11 2366778899999999988831 23568888999999998764 689999999
Q ss_pred CCCHHHHHHHHHHHHHHHHHH
Q 013008 426 IISEQELDQAVEILCKTLPVL 446 (451)
Q Consensus 426 ~~t~e~i~~~l~~l~~~l~~~ 446 (451)
++|++|||+++++|+++++++
T Consensus 421 ~~t~~eid~~~~~l~~~l~~~ 441 (442)
T PRK13360 421 IIEEAQIDELFDILAQALKET 441 (442)
T ss_pred ccCHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999764
No 40
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=7.1e-65 Score=510.45 Aligned_cols=362 Identities=30% Similarity=0.479 Sum_probs=312.1
Q ss_pred eEEEeecccEEEecCCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccC-CCCCHHHHHHHHHHhhccC--CCeE
Q 013008 82 VVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSN-MYYSIPQIELAKRLVACSF--ADRV 158 (451)
Q Consensus 82 ~~~~~~~G~~l~d~~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~~--~e~v 158 (451)
+++++++|+|+||.||++||||.+++++.++||+||+|.+|+.+|++++.+... .+.++...+|+++|++..+ .++|
T Consensus 28 ~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v 107 (429)
T PRK06173 28 YPVERADGVMITLKDGRRLIDGMSSWWAALHGYNHPRLNAAATNQLAKMSHIMFGGFTHEPAVELAQKLLEILPPSLNKI 107 (429)
T ss_pred ceEEeceeeEEEcCCCCEEEEccchHHhccCCCCCHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHhhCCCCcCEE
Confidence 468999999999999999999999999999999999999999999998765433 3567889999999999885 7899
Q ss_pred EecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCC-CCcCCCCcCCCCCeeEeeCC----
Q 013008 159 FFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK-EHYRSPFEPVMPGVNFVEYG---- 233 (451)
Q Consensus 159 ~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~---- 233 (451)
+|++||+||++.|+|+||.|+..++.+ +|.+||.+.++|||.+.+++++++. ..++..+.+..+.+.++|++
T Consensus 108 ~f~~sGseAve~AlklAr~~~~~~g~~---~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 184 (429)
T PRK06173 108 FFADSGSVAVEVAMKMALQYQQAKGEV---QRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFLPQPSIKF 184 (429)
T ss_pred EEeCCchHHHHHHHHHHHHHHHHhCCC---CCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCCCeEeCCCCccc
Confidence 999999999999999999997654432 4789999999999999998887653 32444455555555555543
Q ss_pred -------CHHHHHHhcC--CCCeEEEEEccc-cCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccccc
Q 013008 234 -------NIEATRKLIQ--PGKTAAVFVEPI-QGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEH 303 (451)
Q Consensus 234 -------d~~~le~~l~--~~~~aavi~ep~-~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~ 303 (451)
+++.|++.++ .+++++||+||+ ++++|.++++++|+++|+++|++||++||+||||+||||+|++|++++
T Consensus 185 ~~~~~~~~l~~l~~~i~~~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a~~~ 264 (429)
T PRK06173 185 GEEWNDEAIEPLQDLLEQKGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIATGFGRTGKLFALEH 264 (429)
T ss_pred chhHHHHHHHHHHHHHHhCCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchhcCCCcCCcchHHHh
Confidence 4677888885 468999999997 999999999999999999999999999999999999999999999999
Q ss_pred cCCCcceeeecccccCC-cccccccccHHHHhhccC-----CCccCCCCCcHHHHHHHHHHHHHhcChHHHHH-------
Q 013008 304 YGIFPDIMTLAKPLAGG-LPIGAALVTEKVASAINY-----GDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS------- 370 (451)
Q Consensus 304 ~~~~pdi~t~sK~lg~G-~~iG~v~~~~~i~~~~~~-----~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~------- 370 (451)
+|+.||++||||+++|| +|++++++++++++.+.. ..+++||++||++|++++++|++++++++.++
T Consensus 265 ~gv~PDiv~~gK~l~gG~~p~~a~~~~~~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~i~~~~~~~~~~~~g~~ 344 (429)
T PRK06173 265 AGVVPDIMCIGKALTGGYLTLSATITTEAIAQTICSGEAKCFMHGPTFMANPLACAIAAESIRLLLESPWQQNIQRIEAQ 344 (429)
T ss_pred cCCCCCEEEeehhhhCCccccceEEecHHHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 99999999999999999 699999999999998753 24778999999999999999999977666555
Q ss_pred ----HH--hCCCCcceecccceeEEEEecC--ChHHHHHHHHHCCceeeecCCCCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 013008 371 ----KL--ARNPHVKDVRGLGLIIGIEFDV--SATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKT 442 (451)
Q Consensus 371 ----~~--~~~~~~~~v~g~G~~~~~~~~~--~~~~~~~~l~~~Gv~~~~~~~~~~iri~~~~~~t~e~i~~~l~~l~~~ 442 (451)
+. .+++.+..+|+.|+++++++.. ....+.+.|+++|+++.+.+ +++||.||+++|++|+++++++|+++
T Consensus 345 l~~~L~~~~~~~~v~~vRg~Gl~~~iel~~~~~~~~i~~~l~e~Gi~v~~~g--~~l~~~Ppl~it~~ei~~~~~~l~~~ 422 (429)
T PRK06173 345 LKQELAPAAEFDSVAEVRVLGAIGVVEMKEPVNMATLQPRFVEHGIWVRPFG--KLVYIMPPFIISPDELSQLTSGLLRV 422 (429)
T ss_pred HHHHHHHhhcCCCeeeeeccceEEEEEeCCcccHHHHHHHHHHCCeEEEecC--CEEEEeCCccCCHHHHHHHHHHHHHH
Confidence 21 2466777899999999999942 35688999999999998864 78999999999999999999999999
Q ss_pred HHHHhh
Q 013008 443 LPVLDS 448 (451)
Q Consensus 443 l~~~~~ 448 (451)
+.++.+
T Consensus 423 l~~~~~ 428 (429)
T PRK06173 423 LKQEYN 428 (429)
T ss_pred HHHHhc
Confidence 987653
No 41
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=100.00 E-value=2.6e-64 Score=506.78 Aligned_cols=367 Identities=44% Similarity=0.751 Sum_probs=324.4
Q ss_pred CCCCceEEEeecccEEEecCCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHhhccCCC
Q 013008 77 YNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFAD 156 (451)
Q Consensus 77 ~~~~p~~~~~~~G~~l~d~~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~e 156 (451)
+.+.|+++++++|+|+||.||++||||.+++++.+|||+||+|.+|+.++++++.+....+.++...+|+++|++..+.+
T Consensus 18 ~~~~~~~~~~~~G~~~~d~dG~~~lD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~ 97 (406)
T PRK12381 18 YAPAPFIPVRGEGSRLWDQQGKEYIDFAGGIAVNALGHAHPALREALNEQASKFWHTGNGYTNEPVLRLAKKLIDATFAD 97 (406)
T ss_pred cCCCCceEEEeecCEEEeCCCCEEEEcCcCHhhccCCCCCHHHHHHHHHHHhhcccccCccCCHHHHHHHHHHHhhCCCC
Confidence 45678999999999999999999999999999999999999999999999988644444456777899999999988889
Q ss_pred eEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHH
Q 013008 157 RVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIE 236 (451)
Q Consensus 157 ~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 236 (451)
+|+|++||+|||+.|+++++.++..++.. ++.+|+.++++|||++.+++++++.+.+...+.+..+++..+++||++
T Consensus 98 ~v~~~~sGseA~e~Alk~ar~~~~~~~~~---~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 174 (406)
T PRK12381 98 RVFFCNSGAEANEAALKLARKYAHDRYGS---HKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAYNDLN 174 (406)
T ss_pred eEEEcCCcHHHHHHHHHHHHHHHhhcCCC---CCCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeCCCCHH
Confidence 99999999999999999999997543322 478899999999999999988888776666677777788889999999
Q ss_pred HHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccccccCCCcceeeeccc
Q 013008 237 ATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKP 316 (451)
Q Consensus 237 ~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~t~sK~ 316 (451)
++++.+. +++++|++||+++++|+++++++|+++|+++|++||++||+||||+||||+|.+++++++++.||++||||+
T Consensus 175 ~l~~~l~-~~~aaviiEPv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G~~~~~~~~~v~pDi~t~sK~ 253 (406)
T PRK12381 175 SASALID-DQTCAVIVEPIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDVLTTAKA 253 (406)
T ss_pred HHHHhcc-CCeeEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCcchhhhHhhCCCCCEEEehhh
Confidence 9999996 479999999999999999899999999999999999999999999999999998888889999999999999
Q ss_pred ccCCcccccccccHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH--------------HHhCCCCcceec
Q 013008 317 LAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS--------------KLARNPHVKDVR 382 (451)
Q Consensus 317 lg~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~--------------~~~~~~~~~~v~ 382 (451)
+++|+|+|++++++++++.+....+.+||++||++|+++.++|+.++++++.++ +..+++.+..++
T Consensus 254 l~gG~~ig~~~~~~~~~~~~~~~~~~~t~~~~pl~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~vr 333 (406)
T PRK12381 254 LGGGFPIGAMLTTEKCASVMTVGTHGTTYGGNPLASAVAGKVLELINTPEMLNGVKQRHDWFVERLNTINARYGLFSEIR 333 (406)
T ss_pred hhCCCceEEEEEcHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCEEEEe
Confidence 999999999999999999998767889999999999999999999876655544 122355567789
Q ss_pred ccceeEEEEecC----ChHHHHHHHHHCCceeeecCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHhh
Q 013008 383 GLGLIIGIEFDV----SATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTLPVLDS 448 (451)
Q Consensus 383 g~G~~~~~~~~~----~~~~~~~~l~~~Gv~~~~~~~~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~~~ 448 (451)
+.|+++++++.. ....+.+.|+++||++.+.+. +.+||+|++++|+++|++++++|+++++++..
T Consensus 334 g~Gl~~~~~l~~~~~~~~~~~~~~l~~~Gv~v~~~g~-~~lRl~p~~~~t~~~i~~~~~~l~~~l~~~~~ 402 (406)
T PRK12381 334 GLGLLIGCVLNAEYAGKAKQISQEAAKAGVMVLIAGP-NVVRFAPALNISEEEITTGLDRFARACERFVS 402 (406)
T ss_pred cCeEEEEEEecCchhhHHHHHHHHHHHCCcEEeeCCC-CEEEEeCCccCCHHHHHHHHHHHHHHHHHHHh
Confidence 999999999843 346788999999999987664 78999999999999999999999999988753
No 42
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=1.2e-64 Score=508.20 Aligned_cols=360 Identities=30% Similarity=0.476 Sum_probs=308.2
Q ss_pred CceEEEeecccEEEecCCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccC-CCCCHHHHHHHHHHhhccC--CC
Q 013008 80 APVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSN-MYYSIPQIELAKRLVACSF--AD 156 (451)
Q Consensus 80 ~p~~~~~~~G~~l~d~~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~~--~e 156 (451)
.|+++++++|+|+||.||++||||.+++++.+|||+||+|.+|+.+|++++.+... .+.++...+|+++|++..+ .+
T Consensus 22 ~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~ 101 (422)
T PRK05630 22 RNRLVTSTDGVFLTLEDGSTVIDAMSSWWSAAHGHGHPRLKAAAHKQIDTMSHVMFGGLTHEPAIKLTRKLLNLTDNGLD 101 (422)
T ss_pred CCeeEEeceeeEEEECCCCEEEEcchhHHHhcCCCCCHHHHHHHHHHHHhCCCcccCCcCCHHHHHHHHHHHhhCCCCcC
Confidence 58999999999999999999999999999999999999999999999998765433 3467778999999999875 68
Q ss_pred eEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCC-CCcCCCCcCCCCCeeEeeCC--
Q 013008 157 RVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK-EHYRSPFEPVMPGVNFVEYG-- 233 (451)
Q Consensus 157 ~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-- 233 (451)
+++|++||+||++.|+|+|+.|++.++.+ +|.+||.++++|||.+.+++++++. ..++..+.|..+++.++|++
T Consensus 102 ~v~f~~SGseA~e~AlklAr~~~~~~g~~---~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~ 178 (422)
T PRK05630 102 HVFYSDSGSVSVEVAIKMALQYSKGQGHP---ERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPAPPV 178 (422)
T ss_pred EEEEeCCcHHHHHHHHHHHHHHHHhcCCC---CCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEcCCCcc
Confidence 99999999999999999999998644332 4789999999999999999988753 22334444444454444432
Q ss_pred ------C----HHHHHHhcCCCCeEEEEEccc-cCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCccccccccc
Q 013008 234 ------N----IEATRKLIQPGKTAAVFVEPI-QGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHE 302 (451)
Q Consensus 234 ------d----~~~le~~l~~~~~aavi~ep~-~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~ 302 (451)
| .+.+++++. +++++||+||+ ++.+|.++|+++|+++|+++|++||++||+|||+|||||+|.+|+++
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~-~~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~ 257 (422)
T PRK05630 179 RGSSPQEISEYLRSLELLID-ETVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIATGFGRTGELFATL 257 (422)
T ss_pred cCCChHHHHHHHHHHHHHHh-hceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecceeCCCcCchhhHHH
Confidence 2 245566554 58999999996 99999999999999999999999999999999999999999999999
Q ss_pred ccCCCcceeeecccccCC-cccccccccHHHHhhccCC------CccCCCCCcHHHHHHHHHHHHHhcChHHHHH-----
Q 013008 303 HYGIFPDIMTLAKPLAGG-LPIGAALVTEKVASAINYG------DHGSTFAGSPLVCNAAIAVLDKISNPAFLAS----- 370 (451)
Q Consensus 303 ~~~~~pdi~t~sK~lg~G-~~iG~v~~~~~i~~~~~~~------~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~----- 370 (451)
++++.||++|+||+++|| +|+|++++++++++.+... .|++||++||++|++++++|+.++++++.++
T Consensus 258 ~~gv~PDi~t~gK~l~gG~~p~~av~~~~~i~~~~~~~~~~~~~~h~~T~~g~Pla~aaa~aaL~~l~~~~~~~~~~~~g 337 (422)
T PRK05630 258 AAGVTPDIMCVGKALTGGFMSFAATLCTDKVAQLISTPNGGGALMHGPTFMANPLACAVAHASLEIIETGMWRKQVKRIE 337 (422)
T ss_pred hcCCCCCeeeeechhhcCccccceeeccHHHHHHHhccCCCCccccCCCCcCCHHHHHHHHHHHHHHHhCcHHHHHHHHH
Confidence 999999999999999999 5999999999999987421 4789999999999999999999987766555
Q ss_pred ------H--HhCCCCcceecccceeEEEEecC--ChHHHHHHHHHCCceeeecCCCCEEEEeCCCCCCHHHHHHHHHHHH
Q 013008 371 ------K--LARNPHVKDVRGLGLIIGIEFDV--SATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILC 440 (451)
Q Consensus 371 ------~--~~~~~~~~~v~g~G~~~~~~~~~--~~~~~~~~l~~~Gv~~~~~~~~~~iri~~~~~~t~e~i~~~l~~l~ 440 (451)
+ +.++|.+.++||.|+++++++.. .+..+.+.|+++|+++.+.+ +++||.||+++|++|+|+++++|+
T Consensus 338 ~~l~~~L~~l~~~~~v~~vRg~Gl~~~ie~~~~~~~~~~~~~~~~~Gl~~~~~g--~~l~~~PpL~it~~~i~~~~~~l~ 415 (422)
T PRK05630 338 AELIAGLSPLAHLPGVADVRVLGAIGVVEMEQPVDMEEATQAAVDHGVWLRPFG--RLVYVMPPYITTSEQIAQICAALA 415 (422)
T ss_pred HHHHHHHHHhhcCCCeeeeeccccEEEEEECCcccHHHHHHHHHHCCeEEEecC--CEEEEECCccCCHHHHHHHHHHHH
Confidence 1 12366788899999999999942 35688899999999998764 789999999999999999999999
Q ss_pred HHHHH
Q 013008 441 KTLPV 445 (451)
Q Consensus 441 ~~l~~ 445 (451)
++++.
T Consensus 416 ~al~~ 420 (422)
T PRK05630 416 AAVKA 420 (422)
T ss_pred HHHhc
Confidence 99864
No 43
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=100.00 E-value=1.4e-64 Score=511.74 Aligned_cols=382 Identities=25% Similarity=0.395 Sum_probs=315.8
Q ss_pred hhhccccccchhhhccCCCCCCcchHHHHHHHHhcccccCCCCceEEEeecccEEEecCCCEEEeeccCcccccCCCCCH
Q 013008 38 VAAASVNVEVNDAARGSAGGLGRNNKEVMEAEKKLLVGTYNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDA 117 (451)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~G~~l~d~~G~~~iD~~~~~~~~~lG~~~p 117 (451)
....|.++ |++|++++|||++++.+.+. .+.+.|+++++++|+|+||+||++||||.+++++.+|||+||
T Consensus 49 ~~~~S~~l-~~ra~~~~pgGv~~~~r~~~---------~~~~~p~~~~~a~G~~l~D~dG~~yiD~~~g~g~~~lGh~~p 118 (474)
T PLN02482 49 TTTKSEEI-FKAAKELMPGGVNSPVRAFK---------SVGGQPIVFDRVKGSYAWDVDGNEYIDYVGSWGPAIIGHADD 118 (474)
T ss_pred CChHHHHH-HHHHHhhCCCCCCCcchhhc---------ccCCCCeeEEEeeeCEEEECCCCEEEEecccccccccCCCCH
Confidence 35688889 99999999999998887541 234679999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcccccCCCCCHHHHHHHHHHhhccC-CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEE
Q 013008 118 DWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSF-ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSF 196 (451)
Q Consensus 118 ~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~ 196 (451)
+|.+|+.+|++++.+ ....++...+|+++|++..+ .++|+|++||+||++.|+|+||+||+ |++||.+
T Consensus 119 ~v~~av~~ql~~~~~--~~~~~~~~~~lAe~l~~~~p~~~~v~f~~SGsEA~e~AlklAR~~tg---------r~~Ii~~ 187 (474)
T PLN02482 119 EVLAALAETMKKGTS--FGAPCLLENVLAEMVIDAVPSVEMVRFVNSGTEACMGVLRLARAYTG---------REKIIKF 187 (474)
T ss_pred HHHHHHHHHHhhCCC--CCCCCHHHHHHHHHHHHhCCCCCEEEEeCChHHHHHHHHHHHHHhcC---------CCEEEEE
Confidence 999999999998654 33467778999999999986 89999999999999999999999984 8899999
Q ss_pred cCCccCChhhhhhc--cCCCCcCCCCcC-----CCCCeeEeeCCCHHHHHHhcC--CCCeEEEEEccccCCCCccccCHH
Q 013008 197 TNSFHGRTMGALAL--TSKEHYRSPFEP-----VMPGVNFVEYGNIEATRKLIQ--PGKTAAVFVEPIQGEGGIYSATKE 267 (451)
Q Consensus 197 ~~~yhg~~~~~~~~--~~~~~~~~~~~~-----~~~~~~~~~~~d~~~le~~l~--~~~~aavi~ep~~~~~G~~~~~~~ 267 (451)
+++|||++...... ++......+..+ ..+++..+||||+++|+++++ .+++++||+||+++++|+++|+++
T Consensus 188 ~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~nd~~~l~~~l~~~~~~iAavI~Epv~g~~G~i~p~~~ 267 (474)
T PLN02482 188 EGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAPYNDLEAVKKLFEANKGEIAAVILEPVVGNSGFIVPKKE 267 (474)
T ss_pred CCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEecCCChHHHHHHHHhCCCceEEEEECCCCCCCCCcCCCHH
Confidence 99999988554332 221111111111 123567789999999999996 457999999999999999999999
Q ss_pred HHHHHHHHHHHhCCEEEEeccccCCCcccccccccccCCCcceeeecccccCCcccccccccHHHHhhccC---CCccCC
Q 013008 268 FLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINY---GDHGST 344 (451)
Q Consensus 268 ~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~t~sK~lg~G~~iG~v~~~~~i~~~~~~---~~~~~t 344 (451)
||++|+++|++||++||+|||++|| |+|.+++++++|+.||++||||+++||+|+|++++++++++.+.+ ..+.+|
T Consensus 268 fl~~lr~lc~~~g~lLI~DEV~tGf-R~g~~ga~~~~gv~PDi~t~gK~lggG~Pigav~g~~ei~~~~~~~~~~~~~~T 346 (474)
T PLN02482 268 FLEGLREITKENGALLVFDEVMTGF-RIAYGGAQEYFGITPDLTTLGKVIGGGLPVGAYGGRREIMEMVAPAGPMYQAGT 346 (474)
T ss_pred HHHHHHHHHHHcCCEEEEeccccCe-ecCcchHhHHhCCCCCEEEecchhhCCCceEEEEEcHHHHHhhccCCCcccccC
Confidence 9999999999999999999999999 999989999999999999999999999999999999999998853 347889
Q ss_pred CCCcHHHHHHHHHHHHHhcChHHHHH--------------HHhC--CCCcceecccceeEEEEecC------------C-
Q 013008 345 FAGSPLVCNAAIAVLDKISNPAFLAS--------------KLAR--NPHVKDVRGLGLIIGIEFDV------------S- 395 (451)
Q Consensus 345 ~~~~~~~~aaa~aal~~~~~~~~~~~--------------~~~~--~~~~~~v~g~G~~~~~~~~~------------~- 395 (451)
|++||++|+|++++|+++++++++++ +..+ +|.+ +.+.+.+++++|.. +
T Consensus 347 ~~gnpl~~aAala~L~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~g~~~~--~~~v~g~~gi~f~~~~~~~~~~~~~~d~ 424 (474)
T PLN02482 347 LSGNPLAMTAGIHTLKRLQQPGTYEYLDKITKKLIQGILEAGKKAGHEMC--GGYISGMFGFFFTEGPVYNFADAKKSDT 424 (474)
T ss_pred cchhHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHhcCCCEE--EcccceEEEEEEecCCccChhhhccCCH
Confidence 99999999999999999987766665 2222 2322 12223366776621 1
Q ss_pred --hHHHHHHHHHCCceeeecCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 013008 396 --ATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTLPVL 446 (451)
Q Consensus 396 --~~~~~~~l~~~Gv~~~~~~~~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~ 446 (451)
...+.+.|+++||++.+.+.+. + .|+++||++|||+++++++++++++
T Consensus 425 ~~~~~~~~~l~~~Gv~~~~~~~~~--~-~psl~ht~~dId~~l~al~~~l~~~ 474 (474)
T PLN02482 425 AKFARFHRGMLEEGVYLAPSQFEA--G-FTSLAHTEEDIDFTIAAAERVLARI 474 (474)
T ss_pred HHHHHHHHHHHHCCeEEeccCCCC--C-cCCCCCCHHHHHHHHHHHHHHHHhC
Confidence 2367888999999998865422 2 4899999999999999999998753
No 44
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=2.8e-64 Score=510.32 Aligned_cols=358 Identities=32% Similarity=0.563 Sum_probs=310.2
Q ss_pred CCceEEEeecccEEEecCCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHhhccC--CC
Q 013008 79 RAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSF--AD 156 (451)
Q Consensus 79 ~~p~~~~~~~G~~l~d~~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~e 156 (451)
+.|+++++++|+++||.||++||||+++ ++.+|||+||+|.+|+.+|++++.+.+..+.++...+|+++|++..+ .+
T Consensus 53 ~~~~~i~~a~G~~l~D~dG~~ylD~~g~-~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~ 131 (459)
T PRK06082 53 PCLDVLASAEGIYIEDVDGKKYMDFHGN-NVHQLGYGHPHVIEKVKEQMAKLPFSPRRFTNETAIECAEKLTEIAGGELN 131 (459)
T ss_pred CCCceEEeeeeeEEEECCCCEEEEcccH-hhcccCCCCHHHHHHHHHHHHhCCCccCccCCHHHHHHHHHHHHhCCCCCC
Confidence 3478999999999999999999999855 88899999999999999999987665445678889999999999986 57
Q ss_pred eEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEee-----
Q 013008 157 RVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVE----- 231 (451)
Q Consensus 157 ~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 231 (451)
+++|++||+||++.|+++||.|++ |.+||.++++|||++.+++++++...++..+.|..+++..+|
T Consensus 132 ~v~f~~sGseAve~AlklAr~~tg---------r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (459)
T PRK06082 132 RVLFAPGGTSAIGMALKLARHITG---------NFKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSY 202 (459)
T ss_pred EEEECCCcHHHHHHHHHHHHHhcC---------CCEEEEEeCCCcCccHHHHhhcCCcccccCCCCCCCCCEEeCCCccc
Confidence 999999999999999999999974 789999999999999999988877666666666667766554
Q ss_pred ---CCC--------HHHHHHhcC-CCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccc
Q 013008 232 ---YGN--------IEATRKLIQ-PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLW 299 (451)
Q Consensus 232 ---~~d--------~~~le~~l~-~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~ 299 (451)
+++ +++|+++++ .+++++||+||+++++ .++++++||++|+++|++||++||+|||+|||||+|.+|
T Consensus 203 ~~~~~~~~~~~~~~~~~l~~~i~~~~~vAavIvEPv~g~g-~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~f 281 (459)
T PRK06082 203 RGAFPDADGSDVHYADYLEYVIEKEGGIGAFIAEAVRNTD-VQVPSKAYWKRVREICDKHNVLLIIDEIPNGMGRTGEWF 281 (459)
T ss_pred ccccCChhHHHHHHHHHHHHHHhcCCCEEEEEECCccCCC-CcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhh
Confidence 333 355788886 3579999999999985 678999999999999999999999999999999999999
Q ss_pred cccccCCCcceeeecccccCC-cccccccccHHHHhhccCC-CccCCCCCcHHHHHHHHHHHHHhcChHHHHH-------
Q 013008 300 AHEHYGIFPDIMTLAKPLAGG-LPIGAALVTEKVASAINYG-DHGSTFAGSPLVCNAAIAVLDKISNPAFLAS------- 370 (451)
Q Consensus 300 ~~~~~~~~pdi~t~sK~lg~G-~~iG~v~~~~~i~~~~~~~-~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~------- 370 (451)
+++++|+.||++|+||+++|| +|+|++++++++++.+... .+ +||++||++|+|++++|++++++++.++
T Consensus 282 a~e~~gv~PDiv~~gKgl~gG~~P~~av~~~~~i~~~~~~~~~~-~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~ 360 (459)
T PRK06082 282 THQAYGIEPDILCIGKGLGGGLVPIAAMITKDKYNTAAQISLGH-YTHEKSPLGCAAALATIEVIEQEGLLEKVKADSQF 360 (459)
T ss_pred HhHhhCCCCCEEEecccccCCCCcceEEEEcHHHHhhccCCCCC-CCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 999999999999999999999 6999999999988665322 34 7999999999999999999987766665
Q ss_pred -------HHhCCCCcceecccceeEEEEecCC----------hHHHHHHHHHCCceeeecCCCCEEEEeCCCCCCHHHHH
Q 013008 371 -------KLARNPHVKDVRGLGLIIGIEFDVS----------ATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELD 433 (451)
Q Consensus 371 -------~~~~~~~~~~v~g~G~~~~~~~~~~----------~~~~~~~l~~~Gv~~~~~~~~~~iri~~~~~~t~e~i~ 433 (451)
+.+++|.+.++||.|+|+++++..+ ...+...|+++||++.+.+. +++|++||+++|++||+
T Consensus 361 l~~~L~~l~~~~~~i~~vrG~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~-~~i~~~Ppl~it~~eid 439 (459)
T PRK06082 361 MRERLLEMKAKYPLIGDVRGIGLLWGVELVTDRHTKERAYDEAEAVLYRCLNNGLSFKVSQG-NVIQLSPPLIITREELT 439 (459)
T ss_pred HHHHHHHHHhhCCCeeeeeeccceeEEEEccCccccCccHHHHHHHHHHHHhCCCEEEecCC-CEEEEeCCCccCHHHHH
Confidence 3456788899999999999999311 34677888999999988654 89999999999999999
Q ss_pred HHHHHHHHHHHHHhhc
Q 013008 434 QAVEILCKTLPVLDSN 449 (451)
Q Consensus 434 ~~l~~l~~~l~~~~~~ 449 (451)
++++++++++.++.++
T Consensus 440 ~~~~~l~~~l~~~~~~ 455 (459)
T PRK06082 440 QALAILEEAIAKICQD 455 (459)
T ss_pred HHHHHHHHHHHHHhhh
Confidence 9999999999887654
No 45
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=100.00 E-value=2.1e-64 Score=503.66 Aligned_cols=362 Identities=41% Similarity=0.680 Sum_probs=315.8
Q ss_pred CCCCceEEEeecccEEEecCCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHhhccCCC
Q 013008 77 YNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFAD 156 (451)
Q Consensus 77 ~~~~p~~~~~~~G~~l~d~~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~e 156 (451)
+.+.|+++++++|+++||.||++||||++++++.+|||+||+|.+|+.+++++..+.+..+++++..+|+++|.+..+.+
T Consensus 15 ~~~~~~~~~~~~G~~~~d~dG~~~lD~~sg~~~~~lGh~~p~v~~a~~~q~~~~~~~~~~~~~~~~~~la~~l~~~~~~~ 94 (395)
T PRK03715 15 TNRPDIVFTHGKGSWLYDHNGKRYLDFIQGWAVNCLGHCNPGMVEALAAQAEKLINPSPAFYNEPMAKLAGLLTQHSCFD 94 (395)
T ss_pred cCCCCceEEeeecCEEEECCCCEEEECCcChhhccCCCCCHHHHHHHHHHHHhcccccccccCHHHHHHHHHHhhccCCC
Confidence 44568899999999999999999999999999999999999999999999998766555556778899999999877788
Q ss_pred eEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHH
Q 013008 157 RVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIE 236 (451)
Q Consensus 157 ~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 236 (451)
+++|++||+|||+.|+++++.+++...+ ++++||.++++|||++.+++++++...++..+.|..+++..++++|++
T Consensus 95 ~v~f~~SGseA~e~Aik~ar~~~~~~~~----~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~d~~ 170 (395)
T PRK03715 95 KVFFANSGAEANEGAIKLARKWGRKHKN----GAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVPGFPKAELNDIA 170 (395)
T ss_pred EEEEeCCcHHHHHHHHHHHHHHhhccCC----CCcEEEEECCCcCCChHHHHhhcCCcccccCCCCCCCCceeeCCchHH
Confidence 9999999999999999999988652211 467899999999999999999988766666666767777778899999
Q ss_pred HHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccccccCCCcceeeeccc
Q 013008 237 ATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKP 316 (451)
Q Consensus 237 ~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~t~sK~ 316 (451)
++++++. +++++||+||+++++|.++++++|+++|+++|++||+++|+||||+||||+|++|+++++++.||++|+||+
T Consensus 171 ~l~~~l~-~~~aavi~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRtG~~~a~~~~gv~PDi~t~gK~ 249 (395)
T PRK03715 171 SVEKLIT-DKTVAVMLEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTGTLFAYELSGIEPDIMTLGKG 249 (395)
T ss_pred HHHHHcC-CCceEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCcchhhHhhcCCCCceeeehhh
Confidence 9999996 479999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCcccccccccHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH--------------HHhCCCCcceec
Q 013008 317 LAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS--------------KLARNPHVKDVR 382 (451)
Q Consensus 317 lg~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~--------------~~~~~~~~~~v~ 382 (451)
+++|+|+|+++++++++. +.+..+.+||++||++|++++++|+++++++++++ +.++++ +..++
T Consensus 250 lg~G~p~~av~~~~~i~~-~~~~~~~~T~~g~pl~~aaala~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~-i~~vr 327 (395)
T PRK03715 250 IGGGVPLAALLAKAEVAV-FEAGDQGGTYNGNPLMTAVGVAVISQLLAPGFLEGVRARGEYLKEKLLELSEERG-LEGER 327 (395)
T ss_pred hhCCcceEEEEEcccccc-ccCCCcCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhcCC-cCeEE
Confidence 999999999999999873 44456789999999999999999999987776665 122344 66789
Q ss_pred ccceeEEEEecCC-hHHHHHHHHHC---CceeeecCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 013008 383 GLGLIIGIEFDVS-ATPVVDACRDS---GLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTLPVL 446 (451)
Q Consensus 383 g~G~~~~~~~~~~-~~~~~~~l~~~---Gv~~~~~~~~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~ 446 (451)
|.|+|+++++..+ ...+.+.+.+. |+++.+... +++||.|++.+|++||++++++|+++++++
T Consensus 328 G~Glm~~i~l~~~~~~~~~~~~~~~~~~Gi~~~~~~~-~~lR~~p~l~~t~~ei~~~~~~l~~~l~~~ 394 (395)
T PRK03715 328 GEGLLRALLLGKDIGPQIVEKARDMQPDGLLLNAPRP-NLLRFMPALNVTTEEIDQMIAMLRSVLDKL 394 (395)
T ss_pred cceeEEEEEecCchHHHHHHHHHhccCCCEEEeecCC-CEEEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence 9999999999533 34566666666 999876654 789999999999999999999999999865
No 46
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=100.00 E-value=2.2e-64 Score=509.65 Aligned_cols=364 Identities=34% Similarity=0.595 Sum_probs=314.7
Q ss_pred CCCceEEEeecccEEEecCCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccC-CCCCHHHHHHHHHHhhccC--
Q 013008 78 NRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSN-MYYSIPQIELAKRLVACSF-- 154 (451)
Q Consensus 78 ~~~p~~~~~~~G~~l~d~~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~~-- 154 (451)
.+.|+++++++|+|+||.||++||||.+++++.+|||+||+|.+|+.+|++++.+.+. .+.++...+|+++|++..+
T Consensus 29 ~~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~~~~~~~~~~~la~~L~~~~p~~ 108 (445)
T PRK09221 29 KAAPRLLVSAEGMYYTDADGRKILDGTAGLWCCNAGHGRPEIVEAVARQAATLDYAPAFQMGHPLAFELAERLAELAPGG 108 (445)
T ss_pred CCCCceEEeccccEEEeCCCCEEEEccccHhhccCCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCC
Confidence 3568999999999999999999999999999999999999999999999998765543 3567778999999999885
Q ss_pred CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCC
Q 013008 155 ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGN 234 (451)
Q Consensus 155 ~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 234 (451)
.++|+|++||+||++.|+|+|+.|++.++.+ +|.+||.++++|||++.+++++++...+...|.+..+++..+|+++
T Consensus 109 ~~~v~f~~sGseAve~AlklAr~~~~~~g~~---~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (445)
T PRK09221 109 LDHVFFTNSGSESVDTALKIALAYHRARGQG---TRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHLPHTL 185 (445)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHHHHHhcCCC---CCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeEeCCCc
Confidence 6899999999999999999999998644322 4778999999999999999998876655555666666666555432
Q ss_pred ------------------HHHHHHhcC---CCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCC
Q 013008 235 ------------------IEATRKLIQ---PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLG 293 (451)
Q Consensus 235 ------------------~~~le~~l~---~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~g 293 (451)
+++++++++ .+++++||+||+++++|.++++++||++|+++|++||++||+|||+||||
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~G 265 (445)
T PRK09221 186 DLPENAFSKGQPEHGAELADDLERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFG 265 (445)
T ss_pred cccccccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCC
Confidence 357788775 36899999999999999999999999999999999999999999999999
Q ss_pred cccccccccccCCCcceeeecccccCC-cccccccccHHHHhhccCC-------CccCCCCCcHHHHHHHHHHHHHhcCh
Q 013008 294 RTGYLWAHEHYGIFPDIMTLAKPLAGG-LPIGAALVTEKVASAINYG-------DHGSTFAGSPLVCNAAIAVLDKISNP 365 (451)
Q Consensus 294 r~G~~~~~~~~~~~pdi~t~sK~lg~G-~~iG~v~~~~~i~~~~~~~-------~~~~t~~~~~~~~aaa~aal~~~~~~ 365 (451)
|+|.+|+++++++.||++|+||++++| +|+|++++++++++.+... .+++||++||++|++++++|+.++++
T Consensus 266 RtG~~~~~~~~gv~PDi~~~gK~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~~~~T~~~~pl~~aaa~a~L~~i~~~ 345 (445)
T PRK09221 266 RLGAAFAAERFGVTPDIITFAKGLTNGAIPMGAVIASDEIYDAFMQGPEYAIEFFHGYTYSAHPVACAAGLATLDIYREE 345 (445)
T ss_pred cCchhhHHHhcCCCCCEEEeccccccCcccceeeEEcHHHHHhhccCcccccccccccCCCcCHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999998 8999999999999987431 36789999999999999999999877
Q ss_pred HHHHH----------HH---hCCCCcceecccceeEEEEecC-------ChHHHHHHHHHCCceeeecCCCCEEEEeCCC
Q 013008 366 AFLAS----------KL---ARNPHVKDVRGLGLIIGIEFDV-------SATPVVDACRDSGLLVLTAGKGNVVRLVPPL 425 (451)
Q Consensus 366 ~~~~~----------~~---~~~~~~~~v~g~G~~~~~~~~~-------~~~~~~~~l~~~Gv~~~~~~~~~~iri~~~~ 425 (451)
++.++ .+ .++|.+.++|+.|++.++++.. .+..+.+.|+++||++.+.+ +.+||+||+
T Consensus 346 ~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrg~Gl~~~v~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~~--~~lr~~Ppl 423 (445)
T PRK09221 346 DLFERAAELAPYFEDAVHSLKGLPHVIDIRNIGLVAGIELAPRPGAPGARGYEAFMKCFEKGLLVRYTG--DTIALSPPL 423 (445)
T ss_pred cHHHHHHHHHHHHHHHHHhhccCCCEEEEecCceEEEEEEecccccccchHHHHHHHHHHCCeEEeecC--CEEEEECCc
Confidence 77666 11 2457778899999999998831 13568899999999997754 789999999
Q ss_pred CCCHHHHHHHHHHHHHHHHHH
Q 013008 426 IISEQELDQAVEILCKTLPVL 446 (451)
Q Consensus 426 ~~t~e~i~~~l~~l~~~l~~~ 446 (451)
++|++||++++++|+++++++
T Consensus 424 ~~t~~eid~~~~~l~~~l~~~ 444 (445)
T PRK09221 424 IIEKAQIDELVDALGDALRAV 444 (445)
T ss_pred cCCHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999765
No 47
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=100.00 E-value=2.1e-64 Score=506.44 Aligned_cols=359 Identities=33% Similarity=0.526 Sum_probs=310.4
Q ss_pred ceEEEeecccEEEecCCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccC-CCCCHHHHHHHHHHhhccC--CCe
Q 013008 81 PVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSN-MYYSIPQIELAKRLVACSF--ADR 157 (451)
Q Consensus 81 p~~~~~~~G~~l~d~~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~~--~e~ 157 (451)
|+.+++++|+++||.|||+||||.+++++.++||+||+|.+|+.+|++++.+... .+.++...+|+++|++..+ .++
T Consensus 26 ~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~~ 105 (428)
T PRK07986 26 VYPVVSAEGCELILADGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVMFGGITHPPAIELCRKLVAMTPQPLEC 105 (428)
T ss_pred CeeEEeeeeeEEEeCCCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHhhcCCccccccCCHHHHHHHHHHHhhCCCCcCE
Confidence 4788999999999999999999999999999999999999999999998765433 3467789999999999886 589
Q ss_pred EEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCC-CCcCCCCcCCCCCeeEee-----
Q 013008 158 VFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK-EHYRSPFEPVMPGVNFVE----- 231 (451)
Q Consensus 158 v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~----- 231 (451)
++|++||+||++.|+|++|.|++.++. +|.+||.++++|||.+.+++++++. ..++..+.+..+++.+++
T Consensus 106 v~f~~SGsEAve~AlklAr~~~~~~g~----~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 181 (428)
T PRK07986 106 VFLADSGSVAVEVAMKMALQYWQAKGE----PRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQSR 181 (428)
T ss_pred EEEeCCcHHHHHHHHHHHHHHHHhcCC----CCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCCCcc
Confidence 999999999999999999998653321 4789999999999999999888653 223344555555554443
Q ss_pred ------CCCHHHHHHhcC--CCCeEEEEEccc-cCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCccccccccc
Q 013008 232 ------YGNIEATRKLIQ--PGKTAAVFVEPI-QGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHE 302 (451)
Q Consensus 232 ------~~d~~~le~~l~--~~~~aavi~ep~-~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~ 302 (451)
++|++++++.++ ++++++||+||+ ++.+|+++++++||++|+++|++||++||+|||++||||+|++|+++
T Consensus 182 ~~~~~~~~d~~~l~~~l~~~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~tG~GrtG~~fa~~ 261 (428)
T PRK07986 182 FDGEWDERDIAPFARLMAAHRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATGFGRTGKLFACE 261 (428)
T ss_pred cchhhHHHHHHHHHHHHHhCCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCCeeeec
Confidence 357788998886 457999999996 89999999999999999999999999999999999999999999999
Q ss_pred ccCCCcceeeecccccCC-cccccccccHHHHhhccCC-----CccCCCCCcHHHHHHHHHHHHHhcChHHHHH------
Q 013008 303 HYGIFPDIMTLAKPLAGG-LPIGAALVTEKVASAINYG-----DHGSTFAGSPLVCNAAIAVLDKISNPAFLAS------ 370 (451)
Q Consensus 303 ~~~~~pdi~t~sK~lg~G-~~iG~v~~~~~i~~~~~~~-----~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~------ 370 (451)
++|+.||++|+||+++|| +|+|++++++++++.+... .+++||++||++|+|++++|+.++++++.++
T Consensus 262 ~~gv~PDi~t~gK~l~gG~~p~~av~~~~~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~L~~i~~~~~~~~~~~~g~ 341 (428)
T PRK07986 262 HAGIAPDILCLGKALTGGTMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLACAVANASLSLLESGDWQQQVAAIEA 341 (428)
T ss_pred ccCCCCCEEEechhhhCCcccCcchhchHHHHHHhhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 999999999999999999 6999999999999998643 3789999999999999999999987766665
Q ss_pred -----H--HhCCCCcceecccceeEEEEec--CChHHHHHHHHHCCceeeecCCCCEEEEeCCCCCCHHHHHHHHHHHHH
Q 013008 371 -----K--LARNPHVKDVRGLGLIIGIEFD--VSATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCK 441 (451)
Q Consensus 371 -----~--~~~~~~~~~v~g~G~~~~~~~~--~~~~~~~~~l~~~Gv~~~~~~~~~~iri~~~~~~t~e~i~~~l~~l~~ 441 (451)
+ +.+++.+.++||.|+++++++. .....+.+.|+++|+++.+.+ +++||.||+++|+|||++++++|++
T Consensus 342 ~l~~~l~~l~~~~~i~~vRg~Gl~~~ve~~~~~~~~~~~~~l~~~Gl~~~~~g--~~i~~~Ppl~it~~ei~~~~~~l~~ 419 (428)
T PRK07986 342 QLREELAPLRDAPMVADVRVLGAIGVVETTRPVNMAALQRFFVEQGVWIRPFG--KLIYLMPPYIILPEQLQRLTAAVNR 419 (428)
T ss_pred HHHHHHHHHhcCCCEEeEeccceEEEEEeCCcccHHHHHHHHHHCCcEEEecC--CEEEEeCCCCCCHHHHHHHHHHHHH
Confidence 1 1246778899999999999984 235678999999999998864 7899999999999999999999999
Q ss_pred HHHH
Q 013008 442 TLPV 445 (451)
Q Consensus 442 ~l~~ 445 (451)
++++
T Consensus 420 ~l~~ 423 (428)
T PRK07986 420 AVQD 423 (428)
T ss_pred HHhh
Confidence 9853
No 48
>PRK07046 aminotransferase; Validated
Probab=100.00 E-value=2.3e-64 Score=509.61 Aligned_cols=381 Identities=22% Similarity=0.285 Sum_probs=317.3
Q ss_pred hhhccccccchhhhccCCCCCCc-chHHHHHHHHhcccccCCCCceEEEeecccEEEecCCCEEEeeccCcccccCCCCC
Q 013008 38 VAAASVNVEVNDAARGSAGGLGR-NNKEVMEAEKKLLVGTYNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGD 116 (451)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~p~~~~~~~G~~l~d~~G~~~iD~~~~~~~~~lG~~~ 116 (451)
+.+.|.++ +++|++++|||+.. ..+.+ ..++|+++++++|+++||+||++||||.+++++.+|||+|
T Consensus 26 ~~~~S~~l-~~ra~~~~p~g~~~~~~~~~-----------~~~~p~~~~~a~G~~v~D~DG~~yiD~~~g~g~~~lGh~~ 93 (453)
T PRK07046 26 AHPRSRAL-AARAAQHLLGGVPMHWMNDW-----------PTPFPLFVAEARGARFTDVDGHRYDDFCLGDTGAMFGHSP 93 (453)
T ss_pred cChhhHHH-HHHHHhhCCCCccccccccc-----------CCCCCCeEEeeeeCEEEeCCCCEEEEecccccccccCCCC
Confidence 34577788 99999999999832 22211 0257999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHhhccCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEE
Q 013008 117 ADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSF 196 (451)
Q Consensus 117 p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~ 196 (451)
|+|.+|+.+++++..+ ....++...+|+++|++..+.++|+|++||+||++.|+|+||+||+ |++||.|
T Consensus 94 p~i~~Av~~q~~~~~~--~~~~~~~~~~lAe~l~~~~~~~~v~F~nSGtEA~e~AlrlAR~~TG---------r~~ii~~ 162 (453)
T PRK07046 94 APVARALAEQARRGLT--TMLPSEDAAWVGEELARRFGLPYWQVATTATDANRFVLRWARAVTG---------RPKILVF 162 (453)
T ss_pred HHHHHHHHHHHHhCCC--CCCCCHHHHHHHHHHHHHhCCCEEEEECCHHHHHHHHHHHHHHhhC---------CCEEEEE
Confidence 9999999999998644 3456778999999999998899999999999999999999999984 8899999
Q ss_pred cCCccCChhhhhhc--cCCCCcCCCCc----CCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHH
Q 013008 197 TNSFHGRTMGALAL--TSKEHYRSPFE----PVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQ 270 (451)
Q Consensus 197 ~~~yhg~~~~~~~~--~~~~~~~~~~~----~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~ 270 (451)
+++|||+++..+.. ++.......+. .....+..+||||++++++++..+++++||+||+++++|+++|+++||+
T Consensus 163 ~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~nd~~~l~~~l~~~~vAavi~EPi~g~~G~~~p~~~fl~ 242 (453)
T PRK07046 163 NGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVEFNDLAALEAALADGDVAAVLAEPAMTNIGMVLPEPGFHE 242 (453)
T ss_pred CCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeCCCCHHHHHHHhCCCCeEEEEECCCCCCCCCcCCCHHHHH
Confidence 99999997666542 22221111111 1224567889999999999997678999999999999999999999999
Q ss_pred HHHHHHHHhCCEEEEeccccCCCcccccccccccCCCcceeeecccccCCcccccccccHHHHhhccC---------CCc
Q 013008 271 FLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINY---------GDH 341 (451)
Q Consensus 271 ~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~t~sK~lg~G~~iG~v~~~~~i~~~~~~---------~~~ 341 (451)
+|+++|++||++||+|||+| | |.|.+..++++|+.||++|+||+++||+|+|++++++++++.+.+ ..+
T Consensus 243 ~lr~lc~~~g~llI~DEV~t-f-r~g~Gg~~~~~gv~PDi~t~gK~lggG~Pi~av~g~~~i~~~~~~~~~~~~~~~~~~ 320 (453)
T PRK07046 243 ALRELTRRYGTLLVIDETHT-I-SSGPGGYTRAHGLEPDFLVVGKPIAGGVPCAVYGFSAELAERAQAAKASAPPGHSGI 320 (453)
T ss_pred HHHHHHHHhCCEEEEEcccc-C-ccCCcchhHHhCCCccceeehhhhcCCCcceeeeehHHHHHHHhhccccCCCCCcee
Confidence 99999999999999999999 5 466655677889999999999999999999999999999998752 136
Q ss_pred cCCCCCcHHHHHHHHHHHHHhcChHHHHH--------------HHhCCCCcceecccceeEEEEecC-------------
Q 013008 342 GSTFAGSPLVCNAAIAVLDKISNPAFLAS--------------KLARNPHVKDVRGLGLIIGIEFDV------------- 394 (451)
Q Consensus 342 ~~t~~~~~~~~aaa~aal~~~~~~~~~~~--------------~~~~~~~~~~v~g~G~~~~~~~~~------------- 394 (451)
++||++||++|+|++++|+++++++++++ +.++++....+++.|+++.+.+..
T Consensus 321 ~~T~~gnpl~~aa~~a~L~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~v~g~G~~~~i~~~~~~~~~~~~~~~~~ 400 (453)
T PRK07046 321 GTTLSANALAMAAMRATLAEVMTEAAYAHMLALAARLAAGLRAVIARHGLPWHVTRVGARVEFQFAPTPPRNGAEAAAAL 400 (453)
T ss_pred CCCCcccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCcEEEEEEeCCCCCCHHHHhccc
Confidence 78999999999999999999987776665 234566666799999998888721
Q ss_pred C---hHHHHHHHHHCCceeeecCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHh
Q 013008 395 S---ATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTLPVLD 447 (451)
Q Consensus 395 ~---~~~~~~~l~~~Gv~~~~~~~~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~~ 447 (451)
+ ...+...|+++||++.|.+ +.++++|+ ||++|||+++++++++++++.
T Consensus 401 ~~~~~~~~~~~~~~~Gv~~~~~~--~~~~~~p~--~t~~did~~~~~~~~~l~~~~ 452 (453)
T PRK07046 401 DPELEAALHLYLLNRGVLITPFH--NMMLVCPA--TTAADVDRLVAAFDACLGELL 452 (453)
T ss_pred CHHHHHHHHHHHHHCCCEEeccc--CcEEEeCC--CCHHHHHHHHHHHHHHHHHHh
Confidence 0 1346778889999998743 56788764 899999999999999998764
No 49
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=7.7e-64 Score=507.18 Aligned_cols=359 Identities=40% Similarity=0.747 Sum_probs=311.0
Q ss_pred ceEEEeecccEEEecCCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhccccc-CCCCCHHHHHHHHHHhhccC--CCe
Q 013008 81 PVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVS-NMYYSIPQIELAKRLVACSF--ADR 157 (451)
Q Consensus 81 p~~~~~~~G~~l~d~~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~-~~~~~~~~~~l~~~l~~~~~--~e~ 157 (451)
|+++++++|+++||.||++||||.+|+++.+|||+||+|.+|+.+|++++.+.+ ..+.++...+|+++|++..+ .++
T Consensus 26 ~~~~~~~~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~q~~~~~~~~~~~~~~~~~~~la~~L~~~~~~~~~~ 105 (433)
T PRK08117 26 NLPVVKGEGCYYYGVDGKEYLDFTSGIAVANVGHRHPKVVQAIKEQADKLMHGPSGVIYYESILKLAEELAEITPGGLDC 105 (433)
T ss_pred CceEEeeeeeEEEeCCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCCE
Confidence 489999999999999999999999999999999999999999999999876654 33567779999999999984 689
Q ss_pred EEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCC-CCcCCCCcCCCCCeeEeeCC---
Q 013008 158 VFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK-EHYRSPFEPVMPGVNFVEYG--- 233 (451)
Q Consensus 158 v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--- 233 (451)
++|++||+|||+.|+++|+.+++ +.+||.++++|||++.+++++++. ..++..+.+..+++.++|++
T Consensus 106 v~f~~SGseA~e~AlklAr~~tg---------r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (433)
T PRK08117 106 FFFSNSGAEAIEGALKLAKHVTK---------RPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCD 176 (433)
T ss_pred EEEeCcHHHHHHHHHHHHHHhcC---------CCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCccc
Confidence 99999999999999999999874 788999999999999999877653 33444455656666666554
Q ss_pred --------------CHHHHHHhcC----CCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcc
Q 013008 234 --------------NIEATRKLIQ----PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRT 295 (451)
Q Consensus 234 --------------d~~~le~~l~----~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~ 295 (451)
|+++|+++++ .+++++||+||+++++|+++++++||++|+++|++||++||+||||+||||+
T Consensus 177 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~gr~ 256 (433)
T PRK08117 177 RCPKGEDPEVCFLECLRDLESLFKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQTGFGRT 256 (433)
T ss_pred cccccCchhHHHHHHHHHHHHHHHhccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhccCcc
Confidence 5667777764 3579999999999999999999999999999999999999999999999999
Q ss_pred cccccccccCCCcceeeecccccCCcccccccccHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH-----
Q 013008 296 GYLWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS----- 370 (451)
Q Consensus 296 G~~~~~~~~~~~pdi~t~sK~lg~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~----- 370 (451)
|.+++++++++.||++|+||++++|+|+|++++++++++.+....+.+||++||++|+|++++|+.++++++.++
T Consensus 257 G~~~~~~~~gv~pDi~t~sK~lg~G~pigav~~~~~i~~~~~~~~~~~T~~~np~~~aaa~a~L~~l~~~~l~~~~~~~g 336 (433)
T PRK08117 257 GEWFAAQTFGVVPDIMTIAKGIASGLPLSAVVASKELMEQWPLGSHGTTFGGNPVACAAALATLEVIKEEKLLDNANEMG 336 (433)
T ss_pred ccchhHhhcCCCCCEeehhhhccCCCcceeEEEcHHHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 998888889999999999999999999999999999999887667889999999999999999999876655544
Q ss_pred ---------HHhCCCCcceecccceeEEEEecC--------ChHHHHHHHHHCCceeeecCC-CCEEEEeCCCCCCHHHH
Q 013008 371 ---------KLARNPHVKDVRGLGLIIGIEFDV--------SATPVVDACRDSGLLVLTAGK-GNVVRLVPPLIISEQEL 432 (451)
Q Consensus 371 ---------~~~~~~~~~~v~g~G~~~~~~~~~--------~~~~~~~~l~~~Gv~~~~~~~-~~~iri~~~~~~t~e~i 432 (451)
+.++++.+.++++.|+++++++.. ....+.+.|+++||++.+.+. ++++|+.||+++|+++|
T Consensus 337 ~~l~~~L~~l~~~~~~~~~vrg~Gl~~gi~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g~~~~~lRl~p~~~~t~~~i 416 (433)
T PRK08117 337 AYALERLEVLKEKHPVIGDVRGIGLMIGIEIVDPDGEPDGDAVEKILDKCLEKGLLFYLCGNAGNVLRMIPPLTVTKEEI 416 (433)
T ss_pred HHHHHHHHHHHhcCCceeeeecCCcEEEEEEecCCCCcchHHHHHHHHHHHHCCCEEeecCCCCCEEEEeCCccCCHHHH
Confidence 234567677899999999999831 135678889999999877543 47899999999999999
Q ss_pred HHHHHHHHHHHHHHhh
Q 013008 433 DQAVEILCKTLPVLDS 448 (451)
Q Consensus 433 ~~~l~~l~~~l~~~~~ 448 (451)
++++++|+++++++..
T Consensus 417 ~~~~~~l~~~l~~~~~ 432 (433)
T PRK08117 417 DEGLDILDEALTEYEA 432 (433)
T ss_pred HHHHHHHHHHHHHHhc
Confidence 9999999999987653
No 50
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=100.00 E-value=1.2e-63 Score=502.70 Aligned_cols=362 Identities=36% Similarity=0.581 Sum_probs=314.5
Q ss_pred cccCCC-CceEEEeecccEEEecCCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccC-CCCCHHHHHHHHHHhh
Q 013008 74 VGTYNR-APVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSN-MYYSIPQIELAKRLVA 151 (451)
Q Consensus 74 ~~~~~~-~p~~~~~~~G~~l~d~~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~ 151 (451)
.+.+.+ .|+++++++|++|||.||++||||.+++++.++||+||+|.+|+.+|++++.+... .+.+++..+|+++|++
T Consensus 15 ~~~~~~~~~~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~la~~l~~ 94 (421)
T PRK09792 15 PRGVGVMCNFFAQSAENATLKDVEGNEYIDFAAGIAVLNTGHRHPDLVAAVEQQLQQFTHTAYQIVPYESYVTLAEKINA 94 (421)
T ss_pred ccccccCCCeeEEeccccEEEeCCCCEEEEccCchhhhcCCCCCHHHHHHHHHHHHhccCcccCccCCHHHHHHHHHHHH
Confidence 334433 37899999999999999999999999999999999999999999999998665422 3467778999999999
Q ss_pred ccC---CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCC-CCcCCCCcCCCCCe
Q 013008 152 CSF---ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK-EHYRSPFEPVMPGV 227 (451)
Q Consensus 152 ~~~---~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~-~~~~~~~~~~~~~~ 227 (451)
..+ .++++|++||+||++.|+|+||.+|+ +.+||.++++|||++.+++++++. ..++.++.+..+++
T Consensus 95 ~~p~~~~~~~~f~~sGseA~e~AlklAr~~tg---------r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~ 165 (421)
T PRK09792 95 LAPVSGQAKTAFFTTGAEAVENAVKIARAHTG---------RPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSV 165 (421)
T ss_pred hCCCCCCceEEEeCChHHHHHHHHHHHHHhcC---------CCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCc
Confidence 875 37999999999999999999999874 778999999999999999988764 23455565665667
Q ss_pred eEeeCC----------CHHHHHHhcC----CCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCC
Q 013008 228 NFVEYG----------NIEATRKLIQ----PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLG 293 (451)
Q Consensus 228 ~~~~~~----------d~~~le~~l~----~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~g 293 (451)
..+|++ +++.++++++ .+++++||+||+++++|..+++++|+++|+++|++||++||+|||++|||
T Consensus 166 ~~v~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~g 245 (421)
T PRK09792 166 YHVPYPSDLHGISTQDSLDAIERLFKSDIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFA 245 (421)
T ss_pred EEcCCCcccccccHHHHHHHHHHHHHhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCC
Confidence 666663 4578888886 35799999999999999988999999999999999999999999999999
Q ss_pred cccccccccccCCCcceeeecccccCCcccccccccHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH---
Q 013008 294 RTGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS--- 370 (451)
Q Consensus 294 r~G~~~~~~~~~~~pdi~t~sK~lg~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~--- 370 (451)
|+|.+++++++++.||++||||++++|+|+|++++++++++.+....+.+||++||++|+|++++++.+++++++++
T Consensus 246 r~G~~~a~~~~~~~pDi~t~gK~l~~G~pigav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~~~~~~~~~ 325 (421)
T PRK09792 246 RTGKLFAMDHYADKPDLMTMAKSLAGGMPLSGVVGNANIMDAPAPGGLGGTYAGNPLAVAAAHAVLNIIDKESLCERANQ 325 (421)
T ss_pred CCCchhHHHhcCCCCcEEEeehhhcCCCceEEEEEcHHHHhccCCCCcCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 99999999999999999999999999999999999999999987777889999999999999999999987766655
Q ss_pred -----------HHhCCCCcceecccceeEEEEecC---------ChHHHHHHHHHCCceeeecCC-CCEEEEeCCCCCCH
Q 013008 371 -----------KLARNPHVKDVRGLGLIIGIEFDV---------SATPVVDACRDSGLLVLTAGK-GNVVRLVPPLIISE 429 (451)
Q Consensus 371 -----------~~~~~~~~~~v~g~G~~~~~~~~~---------~~~~~~~~l~~~Gv~~~~~~~-~~~iri~~~~~~t~ 429 (451)
+.+++|.+..++|.|+++++++.. ....+++.|+++||++.+.+. ++.+||.||+++++
T Consensus 326 ~g~~l~~~l~~l~~~~p~v~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~~~g~~~~~irl~P~l~i~~ 405 (421)
T PRK09792 326 LGQRLKNTLIDAKESVPAIAAVRGLGSMIAAEFNDPQTGEPSAAIAQKIQQRALAQGLLLLTCGAYGNVIRFLYPLTIPD 405 (421)
T ss_pred HHHHHHHHHHHHHHhCCCcceecccceEEEEEecCCccCCcchHHHHHHHHHHHHCCcEEeecCCCCCEEEEeCCCcCCH
Confidence 345678788899999999999942 135688899999999976443 58999999999999
Q ss_pred HHHHHHHHHHHHHHH
Q 013008 430 QELDQAVEILCKTLP 444 (451)
Q Consensus 430 e~i~~~l~~l~~~l~ 444 (451)
+++++++++|++++.
T Consensus 406 ~ei~~~~~~l~~~l~ 420 (421)
T PRK09792 406 AQFDAAMKILQDALS 420 (421)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999999874
No 51
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=1.6e-63 Score=501.59 Aligned_cols=355 Identities=37% Similarity=0.619 Sum_probs=309.3
Q ss_pred ceEEEeecccEEEecCCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccC-CCCCHHHHHHHHHHhhccC---CC
Q 013008 81 PVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSN-MYYSIPQIELAKRLVACSF---AD 156 (451)
Q Consensus 81 p~~~~~~~G~~l~d~~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~~---~e 156 (451)
|+++++++|+|+||.||++||||.+++++.+|||+||+|.+|+.+|++++.+... .+.++...+|+++|++..+ .+
T Consensus 23 p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~ 102 (421)
T PRK06777 23 DFYAERAENATLWDVEGREYIDFAAGIAVLNTGHRHPKVVAAVRQQLDQFTHTAYQIVPYASYVTLAERINALAPIDGPA 102 (421)
T ss_pred CeeEEeeecCEEEeCCCCEEEEcccCHHhhccCCCCHHHHHHHHHHHhhcccccccccCChHHHHHHHHHHHhCCCCCCc
Confidence 7899999999999999999999999999999999999999999999998765422 2456778999999999875 57
Q ss_pred eEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCC-CCcCCCCcCCCCCeeEeeCCC-
Q 013008 157 RVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK-EHYRSPFEPVMPGVNFVEYGN- 234 (451)
Q Consensus 157 ~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d- 234 (451)
+++|++||+||++.|+|+||.+|+ |.+||.++++|||++.+++++++. ..++..+.|..+++..++++|
T Consensus 103 ~~~f~~sGseA~e~AlklAr~~tg---------r~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~p~~ 173 (421)
T PRK06777 103 KTAFFTTGAEAVENAVKIARAYTG---------RPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALYPNE 173 (421)
T ss_pred eEEEeCCcHHHHHHHHHHHHHhhC---------CCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCcc
Confidence 999999999999999999999974 788999999999999999988764 234445556666666666654
Q ss_pred ---------HHHHHHhcC----CCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccc
Q 013008 235 ---------IEATRKLIQ----PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAH 301 (451)
Q Consensus 235 ---------~~~le~~l~----~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~ 301 (451)
++.++++++ ++++++||+||+++++|..+++++||++|+++|++||++||+||||+||||+|.++++
T Consensus 174 ~~~~~~~~~~~~l~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~g~~~~~ 253 (421)
T PRK06777 174 LHGVSVEEALSSVERLFKADIAPDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFARTGKLFAM 253 (421)
T ss_pred ccCcCHHHHHHHHHHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCccCCchhhh
Confidence 667888874 3679999999999999998999999999999999999999999999999999998888
Q ss_pred cccCCCcceeeecccccCCcccccccccHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH-----------
Q 013008 302 EHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS----------- 370 (451)
Q Consensus 302 ~~~~~~pdi~t~sK~lg~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~----------- 370 (451)
+++++.||++++||++++|+|+|++++++++++.+....+.+||++||++|+|++++|+.++++++.++
T Consensus 254 ~~~~~~pDiv~~sK~l~~G~pigav~~~~~i~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~~~l~~~~~~~g~~l~~~ 333 (421)
T PRK06777 254 EYYDVKPDLITMAKSLGGGMPISAVVGRAEVMDAPAPGGLGGTYAGNPLAVAAALAVLDVIAEEKLCQRALILGAHLVEV 333 (421)
T ss_pred hhcCCCCCEEeeehhhcCCCceEEEEEcHHHHhccCCCCCCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999987777889999999999999999999877766655
Q ss_pred ---HHhCCCCcceecccceeEEEEecCC---------hHHHHHHHHHCCceeeecCC-CCEEEEeCCCCCCHHHHHHHHH
Q 013008 371 ---KLARNPHVKDVRGLGLIIGIEFDVS---------ATPVVDACRDSGLLVLTAGK-GNVVRLVPPLIISEQELDQAVE 437 (451)
Q Consensus 371 ---~~~~~~~~~~v~g~G~~~~~~~~~~---------~~~~~~~l~~~Gv~~~~~~~-~~~iri~~~~~~t~e~i~~~l~ 437 (451)
+..++|.+..+++.|+|+++++..+ ...+.+.|+++||++.|++. ++++||.||+++++++++++++
T Consensus 334 L~~l~~~~~~i~~vrg~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~~~~~~g~~lr~~ppl~i~~~~i~~~~~ 413 (421)
T PRK06777 334 LEKAKASCPAIVDIRARGSMVAVEFNDPQTGKPSPEFTRQYQRQALEEGLLLLSCGVHGNVIRFLYPLTIPDAQFSKALN 413 (421)
T ss_pred HHHHHHhCCCeEEecCceEEEEEEEecCccCCccHHHHHHHHHHHHhCCeEEeecCCCCCEEEEeCCCCCCHHHHHHHHH
Confidence 2345677888999999999988321 24466667899999998753 5799999999999999999999
Q ss_pred HHHHHHH
Q 013008 438 ILCKTLP 444 (451)
Q Consensus 438 ~l~~~l~ 444 (451)
+|++++.
T Consensus 414 ~l~~~l~ 420 (421)
T PRK06777 414 ILTRLLA 420 (421)
T ss_pred HHHHHHh
Confidence 9999874
No 52
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=2.2e-63 Score=502.27 Aligned_cols=371 Identities=43% Similarity=0.709 Sum_probs=315.0
Q ss_pred HHHHHHHhcccccCC-CCceEEEeecccEEEecCCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccC-CCCCHH
Q 013008 64 EVMEAEKKLLVGTYN-RAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSN-MYYSIP 141 (451)
Q Consensus 64 ~~~~~~~~~~~~~~~-~~p~~~~~~~G~~l~d~~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~-~~~~~~ 141 (451)
++.+...++..+.+. +.|+++++++|+|+||.||++||||.+++++.++||+||+|.+|+.+|++++.+.+. .+.++.
T Consensus 19 ~l~~~~~~~~~~~~~~~~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~ 98 (441)
T PRK05769 19 EIIERDEKYLAQSTRRWYPLVIERGEGVWVEDVDGNVYLDFNAGIAVTNVGHAHPKVVKAVKEQAEKFLHYSLTDFYYEP 98 (441)
T ss_pred HHHHHHHHhhCcccccCCCeeEEecceEEEEeCCCCEEEECCCchhhcccCCCCHHHHHHHHHHHHhccCccCcccCCHH
Confidence 333333344444442 468999999999999999999999999999999999999999999999998765433 345777
Q ss_pred HHHHHHHHhhccC---CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCC-CCcC
Q 013008 142 QIELAKRLVACSF---ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK-EHYR 217 (451)
Q Consensus 142 ~~~l~~~l~~~~~---~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~-~~~~ 217 (451)
..+|+++|++..+ .++|+|++||+||++.|+|+||.||+ |++||.++++|||++.+++++++. ...+
T Consensus 99 ~~~lAe~L~~~~p~~~~~~v~f~~SGsEA~e~AlklAr~~tg---------r~~Ii~~~~~yHG~t~~~ls~t~~~~~~~ 169 (441)
T PRK05769 99 AVELAERLVEIAPGGFEKKVFFTNSGTESNEAAIKIARYHTG---------RKYIIAFLGAFHGRTYGSLSLTASKPVQR 169 (441)
T ss_pred HHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHHHHhC---------CCeEEEECCCcCCccHHHHHhcCCCcccc
Confidence 8999999999885 57999999999999999999999974 789999999999999999887653 3344
Q ss_pred CCCcCCCCCeeEeeCCC------------------HHHHHH-hcC----CCCeEEEEEccccCCCCccccCHHHHHHHHH
Q 013008 218 SPFEPVMPGVNFVEYGN------------------IEATRK-LIQ----PGKTAAVFVEPIQGEGGIYSATKEFLQFLRD 274 (451)
Q Consensus 218 ~~~~~~~~~~~~~~~~d------------------~~~le~-~l~----~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~ 274 (451)
..+.|..+++..+++++ ++.+++ +++ .+++++||+||+++++|+++++++||++|++
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~ 249 (441)
T PRK05769 170 KGFFPLMPGVIHVPYPNPYRNPWGIENPEECGNAVLDFIEDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRK 249 (441)
T ss_pred cCCCCCCCCeEEeCCCccccccccCCchHHHHHHHHHHHHHHHHhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHH
Confidence 55666667777666532 244666 332 4689999999999999999999999999999
Q ss_pred HHHHhCCEEEEeccccCCCcccccccccccCCCcceeeecccccCCcccccccccHHHHhhccCCCccCCCCCcHHHHHH
Q 013008 275 ACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNA 354 (451)
Q Consensus 275 l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~t~sK~lg~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~aa 354 (451)
+|++||+++|+|||++||||+|.+++++++++.||+++|||++++|+|+|++++++++++.+ ...+++||++||++|++
T Consensus 250 l~~~~g~lli~DEv~tG~gr~G~~~a~~~~gv~pDivt~~K~l~~G~p~gav~~~~~i~~~~-~~~~~~T~~g~p~~~aa 328 (441)
T PRK05769 250 LADKYGILLIDDEVQTGMGRTGKMFAIEHFGVEPDIITLAKAIAGGLPLGAVIGRAELMFLP-PGSHANTFGGNPVAAAA 328 (441)
T ss_pred HHHHcCCEEEEechhhCCCcccceehhhccCCCCCEEEEcccccCCcccEEEEEehhhhhcC-CCCCCCCCCcCHHHHHH
Confidence 99999999999999999999999989999999999999999999999999999999998654 35688999999999999
Q ss_pred HHHHHHHhcChHHHHH--------------HHhCCCCcceecccceeEEEEecCC--------hHHHHHHHHHCCceeee
Q 013008 355 AIAVLDKISNPAFLAS--------------KLARNPHVKDVRGLGLIIGIEFDVS--------ATPVVDACRDSGLLVLT 412 (451)
Q Consensus 355 a~aal~~~~~~~~~~~--------------~~~~~~~~~~v~g~G~~~~~~~~~~--------~~~~~~~l~~~Gv~~~~ 412 (451)
++++|+++++ ++.++ +.++++.+..++|.|+++++++..+ ...+.+.|+++|+++.+
T Consensus 329 a~a~L~~l~~-~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~Gil~~~ 407 (441)
T PRK05769 329 ALATLEELEE-GLLENAQKLGEYLRKELKELKEKYEFIGDVRGLGLMIGVELVKDRKEPDPKLRDKVLYEAFKRGLLLLG 407 (441)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhCCCeeeeecceEEEEEEeccCCccccHHHHHHHHHHHHhCCcEEec
Confidence 9999999977 76665 3345777888999999999999321 34678889999999988
Q ss_pred cCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 013008 413 AGKGNVVRLVPPLIISEQELDQAVEILCKTLPVL 446 (451)
Q Consensus 413 ~~~~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~ 446 (451)
.+. +.+||+|++++|++|||+++++|+++++++
T Consensus 408 ~~~-~~lr~~p~l~~t~~~id~~~~~l~~~l~~~ 440 (441)
T PRK05769 408 AGK-SAIRIIPPLIITEEEADIGLEILEEAIKEL 440 (441)
T ss_pred CCC-CEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 765 789999999999999999999999999764
No 53
>PLN02624 ornithine-delta-aminotransferase
Probab=100.00 E-value=2.9e-63 Score=505.84 Aligned_cols=394 Identities=34% Similarity=0.556 Sum_probs=342.9
Q ss_pred hhccCCCCCCcchHHHHHHHHhcccccCCCCceEEEeecccEEEecCCCEEEeeccCcccccCCCCCHHHHHHHHHHHhh
Q 013008 50 AARGSAGGLGRNNKEVMEAEKKLLVGTYNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANV 129 (451)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~G~~l~d~~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~ 129 (451)
..++...++++.++.+++...++..+.|.+.|+++++++|+|+||.||++||||++++++.++||+||+|++|+.+++++
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~G~~l~d~dG~~ylD~~sg~~~~~~Gh~~p~v~~ai~~ql~~ 106 (474)
T PLN02624 27 LPEGSAPSLSDSSAHLIELEEKYSAHNYHPIPVVFSRAKGSRIWDPEGKKYLDFLSAYSAVNQGHCHPKIIKALTEQAEK 106 (474)
T ss_pred CCCCCCCCCCcchHHHHHHHHHhhccccCCCCceEEeeeeCEEEECCCCEEEEcccchhcccCCCCCHHHHHHHHHHHHh
Confidence 34455566778888999888888888888889999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCHHHHHHHHHHhhccCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhh
Q 013008 130 LTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALA 209 (451)
Q Consensus 130 ~~~~~~~~~~~~~~~l~~~l~~~~~~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~ 209 (451)
+.+.+..+.++...+|+++|++.++.++++|++||+||++.|+++++.++....+. ..++.+||.+.++|||++.++++
T Consensus 107 ~~~~~~~~~~~~~~~la~~L~~~~~~~~~~f~~SGseA~e~AlklAr~~~~~~~g~-~~~~~~ii~~~~~yHG~t~~~~s 185 (474)
T PLN02624 107 LTLSSRAFYNDKFPEFAEYLTSMFGYDMVLPMNTGAEGVETAIKLARKWGYEKKGI-PKNEAIIVSCCGCFHGRTLAAIS 185 (474)
T ss_pred cCCcccccCCHHHHHHHHHHHhhcCCCeEEEeCChHHHHHHHHHHHHHHHHhhcCC-CCCCcEEEEECCCcCCCCHHHhh
Confidence 77665556778899999999999988999999999999999999999976322110 00245799999999999999999
Q ss_pred ccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcC--CCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEec
Q 013008 210 LTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQ--PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDE 287 (451)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~--~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DE 287 (451)
+++.+.....|.|..+++.+++++|++.++++++ .+++++|++||+++++|.++++++||++|+++|++||++||+||
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DE 265 (474)
T PLN02624 186 MSCDNEATRGFGPLLPGHLKVDFGDLDALEKIFEEDGDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADE 265 (474)
T ss_pred cCCCccccccCCCCCCCceEeCCCCHHHHHHHHHhCCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEec
Confidence 8887766666778888889999999999999996 35799999999999999999999999999999999999999999
Q ss_pred cccCCCcccccccccccCCCcceeeecccccCC-cccccccccHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChH
Q 013008 288 VQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAGG-LPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPA 366 (451)
Q Consensus 288 v~tg~gr~G~~~~~~~~~~~pdi~t~sK~lg~G-~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~ 366 (451)
||+||||+|.+++++++++.||+++|||++++| +|+|++++++++++.+.+..+++||++||++++++.++|+.+++++
T Consensus 266 v~tG~GrtG~~~a~~~~~i~pDiv~lsK~lggG~~pigav~~~~~i~~~~~~~~~~~T~~g~pl~~aaa~aaLe~l~~~~ 345 (474)
T PLN02624 266 IQTGLARTGKMLACDWEEVRPDVVILGKALGGGVIPVSAVLADKDVMLCIKPGEHGSTFGGNPLASAVAMAALQVVQDEK 345 (474)
T ss_pred cccCcCcCcchhhHHhcCCCCCEEEecccccCCCCcceeeeecHHHHhHhccCCcCCCCCCCHHHHHHHHHHHHHHHhch
Confidence 999999999988888889999999999999987 8999999999999988777788999999999999999999887655
Q ss_pred HHHH--------------HHhCCC-CcceecccceeEEEEecC------ChHHHHHHHHHCCceeeecCCCCEEEEeCCC
Q 013008 367 FLAS--------------KLARNP-HVKDVRGLGLIIGIEFDV------SATPVVDACRDSGLLVLTAGKGNVVRLVPPL 425 (451)
Q Consensus 367 ~~~~--------------~~~~~~-~~~~v~g~G~~~~~~~~~------~~~~~~~~l~~~Gv~~~~~~~~~~iri~~~~ 425 (451)
+.++ +.++++ .+..+++.|+++.++++. .+.++++.|+++||++.|.+. +.+||+|++
T Consensus 346 l~~~~~~~~~~l~~~L~~l~~~~~~~i~~vrg~G~~~~i~l~~~~~~~~~a~~~~~~L~e~GV~v~p~~~-~~lR~~p~l 424 (474)
T PLN02624 346 LAERSAKLGQELRDQLQKIQKQFPKLIKEVRGRGLLNAVVLNSPKLGPVSAYDVCLKLKERGLLAKPTHD-TIIRLAPPL 424 (474)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCceEEEEeeEEEEEEEecCCCcChHHHHHHHHHHHhCCeEEecCCC-CEEEEECCc
Confidence 4433 223455 466789999999998842 145788899999999998765 889999999
Q ss_pred CCCHHHHHHHHHHHHHHHHH
Q 013008 426 IISEQELDQAVEILCKTLPV 445 (451)
Q Consensus 426 ~~t~e~i~~~l~~l~~~l~~ 445 (451)
.+|+++|++++++|+++++.
T Consensus 425 ~~t~e~id~~l~~L~~~l~~ 444 (474)
T PLN02624 425 SISEDELQECSKALSDVLEH 444 (474)
T ss_pred cCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999998865
No 54
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=4.3e-63 Score=499.97 Aligned_cols=375 Identities=34% Similarity=0.600 Sum_probs=318.4
Q ss_pred HHHHHHHHhcccccCC--CCceEEEeecccEEEecCCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccCC-CCC
Q 013008 63 KEVMEAEKKLLVGTYN--RAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNM-YYS 139 (451)
Q Consensus 63 ~~~~~~~~~~~~~~~~--~~p~~~~~~~G~~l~d~~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~-~~~ 139 (451)
.++++++.++..+.|. ..|+++++++|+||||.||++||||.+|+++.+|||+||+|.+|+.+|++++.+.... +.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~ 83 (443)
T PRK08360 4 LEIIERYSKVISPANRVTYYPLVPVKAENAKVWDIEGNEYIDFLSDAAVQNVGHNNPRVVKAIKEQTDKLIHYTPIYGFP 83 (443)
T ss_pred HHHHHHHHHhcccccccccCCceEEecceeEEEECCCCEEEEccccHhhcccCCCCHHHHHHHHHHHHhccCccccccCc
Confidence 3444455555555553 5689999999999999999999999999999999999999999999999987655332 346
Q ss_pred HHHHHHHHHHhhccC--CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCC-Cc
Q 013008 140 IPQIELAKRLVACSF--ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKE-HY 216 (451)
Q Consensus 140 ~~~~~l~~~l~~~~~--~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~-~~ 216 (451)
+...+|+++|++..+ .++|+|++||+||++.|+|+||.||+ |.+|+.+.++|||++.+++++++.. .+
T Consensus 84 ~~~~~la~~L~~~~p~~~~~v~f~~sGsEAve~AlklAr~~tg---------r~~ii~~~~~yHG~t~~a~s~~~~~~~~ 154 (443)
T PRK08360 84 VEPLLLAEKLIEIAPGDNPKVSFGLSGSDANDGAIKFARAYTK---------RRKILSYLRSYYGSTYGAMSLTGLDFPV 154 (443)
T ss_pred HHHHHHHHHHHHhCCCCCCEEEEcCCHHHHHHHHHHHHHHhcC---------CCeEEEEeCCcCCcCHHHHHhcCCCccc
Confidence 778999999999986 47999999999999999999999974 7899999999999999998877632 23
Q ss_pred CCCCcCCCCCeeEeeCCC-----------------HHHHHHhcC----CCCeEEEEEccccCCCCccccCHHHHHHHHHH
Q 013008 217 RSPFEPVMPGVNFVEYGN-----------------IEATRKLIQ----PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDA 275 (451)
Q Consensus 217 ~~~~~~~~~~~~~~~~~d-----------------~~~le~~l~----~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l 275 (451)
+..+.+ .+++.++|+++ ++.++++++ .+++++||+||+++++|.++++++|+++|+++
T Consensus 155 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l 233 (443)
T PRK08360 155 RALVGE-LSDVHYIPYPDCYRCPFGKEPGSCKMECVEYIKEKFEGEVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKI 233 (443)
T ss_pred ccCCCC-CCCcEEEeCCccccccccCchhhhHHHHHHHHHHHHHhccCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHH
Confidence 334444 45566666543 455667664 36799999999999999999999999999999
Q ss_pred HHHhCCEEEEeccccCCCcccccccccccCCCcceeeecccccCCcccccccccHHHHhhccCCCccCCCCCcHHHHHHH
Q 013008 276 CDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAA 355 (451)
Q Consensus 276 ~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~t~sK~lg~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~aaa 355 (451)
|++||++||+||||+||||+|.+++++++++.||++++||++++|+|+|++++++++++.+....+.+|+++||++|+++
T Consensus 234 ~~~~g~llI~DEv~~g~gr~G~~~a~~~~~~~pDiitlsK~l~~G~pigav~~~~~i~~~~~~~~~~~T~~~~p~~~aaa 313 (443)
T PRK08360 234 LDEHGILLVVDEVQSGLGRTGKWFAIEHFGVEPDIITLGKPLGGGLPISATIGRAEIMDSLPPLAHAFTLSGNPVASAAA 313 (443)
T ss_pred HHHcCCEEEEeccccCCCcCccchhhhhcCCCCCEEEecccccCCceeEEEEEcHHHHhhhcCCCCCCCCCcCHHHHHHH
Confidence 99999999999999999999998888888999999999999999999999999999999987666888999999999999
Q ss_pred HHHHHHhcChHHHHH--------------HHhCCCCcceecccceeEEEEecC----------ChHHHHHHHHHCCceee
Q 013008 356 IAVLDKISNPAFLAS--------------KLARNPHVKDVRGLGLIIGIEFDV----------SATPVVDACRDSGLLVL 411 (451)
Q Consensus 356 ~aal~~~~~~~~~~~--------------~~~~~~~~~~v~g~G~~~~~~~~~----------~~~~~~~~l~~~Gv~~~ 411 (451)
+++|+.++++++.++ +.+++|.+.+++|.|+|++++|.. .+..+...|+++|+++.
T Consensus 314 ~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrg~Gl~~gie~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~ 393 (443)
T PRK08360 314 LAVIEEIEEKNLLKRAEKLGNYTKKRLEEMKKKHELIGDVRGIGLMIGVDLVKDRETKERAYEEAAKVVWRAWELGLIVT 393 (443)
T ss_pred HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEEecCCcccCccHHHHHHHHHHHHHCCeEEe
Confidence 999999877666655 234577788999999999999831 13468888999999987
Q ss_pred ecCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHhh
Q 013008 412 TAGKGNVVRLVPPLIISEQELDQAVEILCKTLPVLDS 448 (451)
Q Consensus 412 ~~~~~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~~~ 448 (451)
+.+. +.+|+.||+++|++||++++++|++++++++.
T Consensus 394 ~~~~-~~lr~~P~l~~t~~~id~~~~~l~~~l~~~~~ 429 (443)
T PRK08360 394 FFSG-NVLRIQPPLTIEKEVLDEGLDILEEAIEDVEE 429 (443)
T ss_pred ecCC-CEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 6544 88999999999999999999999999988753
No 55
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=100.00 E-value=2.3e-63 Score=501.49 Aligned_cols=358 Identities=37% Similarity=0.606 Sum_probs=309.8
Q ss_pred CCCceEEEeecccEEEecCCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccC-CCCCHHHHHHHHHHhhccC--
Q 013008 78 NRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSN-MYYSIPQIELAKRLVACSF-- 154 (451)
Q Consensus 78 ~~~p~~~~~~~G~~l~d~~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~~-- 154 (451)
.++|+++++++|++|||.||++||||.+++++.++||+||+|.+|+.+|++++.+... ...++...+|+++|++..+
T Consensus 13 ~~~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~ql~~~~~~~~~~~~~~~~~~la~~l~~~~p~~ 92 (420)
T TIGR00700 13 VTLPVFAARAEGAILEDVDGNRLIDFASGIAVLNIGHSHPRVVDAVRTQVAEFTHTCFMVTPYEGYVALAEKLNRIAPGS 92 (420)
T ss_pred CCCCeeEEeeeeeEEEeCCCCEEEECccCHHhccCCCCCHHHHHHHHHHHHhccCccccccCChHHHHHHHHHHHhCCCC
Confidence 4579999999999999999999999999999999999999999999999998765433 2456678999999999875
Q ss_pred -CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCC-CcCCCCcCCCCCeeEeeC
Q 013008 155 -ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKE-HYRSPFEPVMPGVNFVEY 232 (451)
Q Consensus 155 -~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 232 (451)
.++++|++||+||++.|+|+||.||+ |.+||.++++|||++.+++++++.. .+..++.|..+++..+++
T Consensus 93 ~~~~v~f~~sGseA~e~AlklAr~~tg---------r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (420)
T TIGR00700 93 GPKKSVFFNSGAEAVENAVKIARSYTG---------RPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPL 163 (420)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHhcC---------CCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCC
Confidence 47999999999999999999999974 7789999999999999999887642 344455565666665554
Q ss_pred C----------------CHHHHHHhcC----CCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCC
Q 013008 233 G----------------NIEATRKLIQ----PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGL 292 (451)
Q Consensus 233 ~----------------d~~~le~~l~----~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~ 292 (451)
+ +++.+++++. ++++++||+||+++++|.++++++|+++|+++|++||++||+||||+||
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~ 243 (420)
T TIGR00700 164 PYPYRDGLLDKQLSTDGELAAARAIFVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGF 243 (420)
T ss_pred CccccccccccchhHHHHHHHHHHHHHhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCC
Confidence 3 2567777763 4689999999999999999999999999999999999999999999999
Q ss_pred CcccccccccccCCCcceeeecccccCCcccccccccHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH--
Q 013008 293 GRTGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS-- 370 (451)
Q Consensus 293 gr~G~~~~~~~~~~~pdi~t~sK~lg~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~-- 370 (451)
||+|.+++++++++.||+++|||++++|+|+|++++++++++.+....+.+||++||++|++++++|+.++++++.++
T Consensus 244 gr~g~~~a~~~~~~~pDi~~lsK~l~~G~pig~v~~~~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~~~~~~~~ 323 (420)
T TIGR00700 244 ARTGAMFACEHEGPEPDLITTAKSLADGLPLSGVTGRAEIMDAPAPGGLGGTYAGNPLACAAALAVLAIIESEGLIERAR 323 (420)
T ss_pred cccchhHHHhhcCCCCCEEEeeccccCCcceEEEEecHHHHhhcCCCCcCCCCCcCHHHHHHHHHHHHHHHhccHHHHHH
Confidence 999998888999999999999999999999999999999999987777889999999999999999999877666555
Q ss_pred ------------HHhCCCCcceecccceeEEEEec-C--------ChHHHHHHHHHCCceeeecCC-CCEEEEeCCCCCC
Q 013008 371 ------------KLARNPHVKDVRGLGLIIGIEFD-V--------SATPVVDACRDSGLLVLTAGK-GNVVRLVPPLIIS 428 (451)
Q Consensus 371 ------------~~~~~~~~~~v~g~G~~~~~~~~-~--------~~~~~~~~l~~~Gv~~~~~~~-~~~iri~~~~~~t 428 (451)
+.+++|.+..+++.|+++++++. . ....+.+.|+++||++.|++. ++++||.|+++++
T Consensus 324 ~~g~~l~~~L~~l~~~~~~~~~vrg~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~p~~~f~~~lRl~p~l~~~ 403 (420)
T TIGR00700 324 QIGRLVTDRLTTLKAVDPRIGDVRGLGAMIAVELVDPGTTEPDAGLAERIATAAHAAGLLLLTCGMFGNIIRFLPPLTIG 403 (420)
T ss_pred HHHHHHHHHHHHHHhhCCCEEEeeccceEEEEEEecCCCCCccHHHHHHHHHHHHHCCeEEeccCCCCCEEEEECCCCcC
Confidence 33456777889999999999882 1 134567777899999998653 5799999999999
Q ss_pred HHHHHHHHHHHHHHHH
Q 013008 429 EQELDQAVEILCKTLP 444 (451)
Q Consensus 429 ~e~i~~~l~~l~~~l~ 444 (451)
+++|++++++|+++++
T Consensus 404 ~~~l~~~~~~l~~~l~ 419 (420)
T TIGR00700 404 DELLSEGLDILCAILA 419 (420)
T ss_pred HHHHHHHHHHHHHHhh
Confidence 9999999999999874
No 56
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=100.00 E-value=6.3e-63 Score=502.01 Aligned_cols=381 Identities=33% Similarity=0.598 Sum_probs=317.7
Q ss_pred chHHHHHHHHhcccccCC-CCceEEEeecccEEEecCCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhccccc-CCCC
Q 013008 61 NNKEVMEAEKKLLVGTYN-RAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVS-NMYY 138 (451)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~-~~p~~~~~~~G~~l~d~~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~-~~~~ 138 (451)
.++++.++..++....+. ..|+++++++|+||||.|||+||||.+++++.++||+||+|.+|+.+|++++.+.. ..+.
T Consensus 16 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~ 95 (451)
T PRK06918 16 KAASLLERRQNIVPKGVSNGIPTFAQSANGALVTDVDGNQYIDFAGAIGTINVGHSHPKVKEALHKQVDQYIHTGFNVMM 95 (451)
T ss_pred CHHHHHHHHHHhhccccccCCCceEEeccccEEEeCCCCEEEEcCCchhhcCCCCCCHHHHHHHHHHHHhccCccccccc
Confidence 334444444444444332 34789999999999999999999999999999999999999999999999876543 2345
Q ss_pred CHHHHHHHHHHhhccC--C-CeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCC-C
Q 013008 139 SIPQIELAKRLVACSF--A-DRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK-E 214 (451)
Q Consensus 139 ~~~~~~l~~~l~~~~~--~-e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~-~ 214 (451)
++...+|+++|++..+ . ++|+|++||+||++.|+|+||.||+ |.+||.++++|||++.+++++++. .
T Consensus 96 ~~~~~~la~~L~~~~p~~~~~~v~f~~sGseA~e~AlklAr~~tg---------r~~ii~~~~~yHG~t~~~ls~~~~~~ 166 (451)
T PRK06918 96 YEPYIELAEKLAALAPGSFDKKVLFLNSGAEAVENAVKIARKYTK---------RQGIISFSRGFHGRTLMTMTMTSKVK 166 (451)
T ss_pred cHHHHHHHHHHHHhCCCCCCCEEEEcCCcHHHHHHHHHHHHHHhC---------CCcEEEECCCcCccchhhhhhcCCCc
Confidence 7779999999999986 2 6999999999999999999999984 788999999999999999988764 3
Q ss_pred CcCCCCcCCCCCeeEeeCCC-----------------HHHHHHhc----CCCCeEEEEEccccCCCCccccCHHHHHHHH
Q 013008 215 HYRSPFEPVMPGVNFVEYGN-----------------IEATRKLI----QPGKTAAVFVEPIQGEGGIYSATKEFLQFLR 273 (451)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~d-----------------~~~le~~l----~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~ 273 (451)
.++..+.|..+++..+|+++ ++.+++.+ .++++++||+||+++++|.++++++|+++|+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~ 246 (451)
T PRK06918 167 PYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIEEFKNFFISEVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVR 246 (451)
T ss_pred cccccCCCCCCCcEEcCCCccccccccCchHHHHHHHHHHHHHHHHhhcCCCceEEEEECcccCCCCCccCCHHHHHHHH
Confidence 34444556666666665542 22344443 3468999999999999999999999999999
Q ss_pred HHHHHhCCEEEEeccccCCCcccccccccccCCCcceeeecccccCCcccccccccHHHHhhccCCCccCCCCCcHHHHH
Q 013008 274 DACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCN 353 (451)
Q Consensus 274 ~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~t~sK~lg~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~a 353 (451)
++|++||++||+||||+||||+|.+++++++++.||+++|||++++|+|+|++++++++++.+....+.+||++||++|+
T Consensus 247 ~l~~~~gillI~DEV~tg~gr~g~~~a~~~~~v~pDi~t~sK~l~~G~pig~v~~~~~i~~~~~~~~~~~T~~g~~l~~a 326 (451)
T PRK06918 247 NICSEHGILFVADEIQTGFARTGKYFAIEHFDVVPDLITVSKSLGAGVPISGVIGRKEIMDESAPGELGGTYAGSPLGCA 326 (451)
T ss_pred HHHHHcCCEEEEeccccCcCccCceehhHhcCCCCCEEeeehhhcCCCccEEEEEcHHHHhccCCCCcCcCCCcCHHHHH
Confidence 99999999999999999999999988888999999999999999999999999999999999877778899999999999
Q ss_pred HHHHHHHHhcChHHHHH--------------HHhCCCCcceecccceeEEEEec------C----ChHHHHHHHHHCCce
Q 013008 354 AAIAVLDKISNPAFLAS--------------KLARNPHVKDVRGLGLIIGIEFD------V----SATPVVDACRDSGLL 409 (451)
Q Consensus 354 aa~aal~~~~~~~~~~~--------------~~~~~~~~~~v~g~G~~~~~~~~------~----~~~~~~~~l~~~Gv~ 409 (451)
++.++|+.++++++.++ +.++++.+..+++.|+++++++. . ....+.+.|+++||+
T Consensus 327 aa~a~l~~i~~~~~~~~~~~~g~~l~~~l~~l~~~~~~~~~vrg~G~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gvl 406 (451)
T PRK06918 327 AALAVLDIIEKENLNDRAIELGKVVMNRFEEMKNKYNCIGDVRGLGAMCAFELVQDRKTKEPDKTLTANICKEANKRGLL 406 (451)
T ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhCCCceeeccceeEEEEEEccCCCcCCCcHHHHHHHHHHHHHCCeE
Confidence 99999999876655544 23456777789999999998872 1 134577778899999
Q ss_pred eeecCC-CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHhhcC
Q 013008 410 VLTAGK-GNVVRLVPPLIISEQELDQAVEILCKTLPVLDSNS 450 (451)
Q Consensus 410 ~~~~~~-~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~~~~~ 450 (451)
+.|++. ++++||.||+++++++|++++++|+++++++.+..
T Consensus 407 v~~~~~~~~~lrl~p~l~~t~~~id~~l~~l~~~l~~~~~~~ 448 (451)
T PRK06918 407 LLSAGTYGNVIRVLMPLVITDEQLEEGLTIIEESLQACYEKA 448 (451)
T ss_pred EeecCCCCCEEEEECCCccCHHHHHHHHHHHHHHHHHHHHhh
Confidence 988643 57899999999999999999999999998876553
No 57
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=100.00 E-value=2.2e-63 Score=499.25 Aligned_cols=362 Identities=35% Similarity=0.556 Sum_probs=310.9
Q ss_pred cccCC-CCceEEEeecccEEEecCCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccC-CCCCHHHHHHHHHHhh
Q 013008 74 VGTYN-RAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSN-MYYSIPQIELAKRLVA 151 (451)
Q Consensus 74 ~~~~~-~~p~~~~~~~G~~l~d~~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~ 151 (451)
...|. +.|+++++++|+|+||.||++||||.+++++.++||+||+|.+|+++|+++..+... .+.++...+|+++|++
T Consensus 10 ~~~~~~~~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~lae~l~~ 89 (412)
T TIGR02407 10 VRSYCRSFPTVFEKAKGSTLWDEDGKEYIDFFAGAGALNYGHNNPKLKQALIDYLADDGIIHSLDMATEAKREFLETFNE 89 (412)
T ss_pred HhccCCCCCceEEecccCEEEeCCCCEEEEcccchhhccCCCCCHHHHHHHHHHHhhccceeccccCcHHHHHHHHHHHH
Confidence 33443 468999999999999999999999999999999999999999999999987544322 2456778999999998
Q ss_pred cc--C--C-CeEEe-cCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCC
Q 013008 152 CS--F--A-DRVFF-SNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMP 225 (451)
Q Consensus 152 ~~--~--~-e~v~~-~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~ 225 (451)
.. + . ++++| ++||+||++.|+|+||.+++ |.+||.++++|||++.+++++++...++..+.+..+
T Consensus 90 ~~~~~~~~~~~~~f~~~sGseA~e~AlklAr~~tg---------r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~ 160 (412)
T TIGR02407 90 IILKPRGLDYKVQFPGPTGTNAVESALKLARKVTG---------RSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLS 160 (412)
T ss_pred hccCccCCCceEEEeCCCchHHHHHHHHHHhhhcC---------CCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCC
Confidence 74 2 2 35666 59999999999999999874 789999999999999999998876666666666666
Q ss_pred CeeEeeCC--------CHHHHHHhcCC-----CCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCC
Q 013008 226 GVNFVEYG--------NIEATRKLIQP-----GKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGL 292 (451)
Q Consensus 226 ~~~~~~~~--------d~~~le~~l~~-----~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~ 292 (451)
++.++|++ +++.++++++. +++++||+||+++++|.++++++||++|+++|++||++||+|||+|||
T Consensus 161 ~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~ 240 (412)
T TIGR02407 161 NVSRMPYDGYLGGDVDTIAYFEKLLEDSSSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGC 240 (412)
T ss_pred CeEECCCCCccccchhHHHHHHHHHHhccCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCC
Confidence 77778874 47788888862 468999999999999999999999999999999999999999999999
Q ss_pred CcccccccccccCCCcceeeecccccC-CcccccccccHHHHhhccCCCccCCCCCcHHHHHHHHHHHHH-hcChHHHHH
Q 013008 293 GRTGYLWAHEHYGIFPDIMTLAKPLAG-GLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDK-ISNPAFLAS 370 (451)
Q Consensus 293 gr~G~~~~~~~~~~~pdi~t~sK~lg~-G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~-~~~~~~~~~ 370 (451)
||+|++|+++++++.||++++||++++ |+|+|++++++++ +.+....+.+||++||++|+++.++|+. ++++++.++
T Consensus 241 GRtG~~~a~~~~~v~PDi~~~~K~lg~~G~pigav~~~~~~-~~~~~~~~~~T~~gnpl~~aaa~a~l~~~i~~~~l~~~ 319 (412)
T TIGR02407 241 GRTGTFFSFEPAGIEPDIVCLSKSISGYGLPLALTLIKPEL-DVWKPGEHNGTFRGNNLAFVTATAALEYYWSDDAFEKA 319 (412)
T ss_pred CccchhHHhcccCCCCCEEEechhccCCccceeEEEEchhh-hccCCCccCCCCCccHHHHHHHHHHHHHHhcccHHHHH
Confidence 999999999999999999999999998 8999999999887 6666567889999999999999999995 777666555
Q ss_pred --------------HHhCCC-CcceecccceeEEEEecC--ChHHHHHHHHHCCceeeecCC-CCEEEEeCCCCCCHHHH
Q 013008 371 --------------KLARNP-HVKDVRGLGLIIGIEFDV--SATPVVDACRDSGLLVLTAGK-GNVVRLVPPLIISEQEL 432 (451)
Q Consensus 371 --------------~~~~~~-~~~~v~g~G~~~~~~~~~--~~~~~~~~l~~~Gv~~~~~~~-~~~iri~~~~~~t~e~i 432 (451)
+.++++ .+..+++.|+++++++.. ....+.+.|+++||++.+.+. ++.+||.||+++|++|+
T Consensus 320 ~~~~g~~l~~~l~~l~~~~~~~~~~vrg~Gl~~~l~l~~~~~~~~~~~~~~~~Gv~v~~~~~~~~~lr~~p~l~~t~~~i 399 (412)
T TIGR02407 320 VQRKSEIIQERLDRIVAEYPELIKQVRGRGLMQGIECGDGDLAGKIAKAAFENGLIIETSGPNDEVIKLLPPLTIDEETL 399 (412)
T ss_pred HHHHHHHHHHHHHHHHhhCCCceEeeecceeEEEEEecChHHHHHHHHHHHHCCCEEeccCCCCCEEEEECCCCCCHHHH
Confidence 234566 467899999999999943 356788999999999987653 47899999999999999
Q ss_pred HHHHHHHHHHHHH
Q 013008 433 DQAVEILCKTLPV 445 (451)
Q Consensus 433 ~~~l~~l~~~l~~ 445 (451)
++++++|++++++
T Consensus 400 ~~~~~~l~~~l~~ 412 (412)
T TIGR02407 400 QQGLDILEQAVEE 412 (412)
T ss_pred HHHHHHHHHHHhC
Confidence 9999999999863
No 58
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=5e-63 Score=499.74 Aligned_cols=363 Identities=34% Similarity=0.562 Sum_probs=314.2
Q ss_pred CCceEEEeecccEEEecCCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccC-CCCCHHHHHHHHHHhhccC--C
Q 013008 79 RAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSN-MYYSIPQIELAKRLVACSF--A 155 (451)
Q Consensus 79 ~~p~~~~~~~G~~l~d~~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~~--~ 155 (451)
+.|+++++++|+||||.||++||||.+++++.+|||+||+|.+|+++|++++.+... .+.++...+|+++|++..+ .
T Consensus 23 ~~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~ 102 (423)
T PRK05964 23 PPPIPIVRAEGAYLYLADGRELIDAISSWWVATHGHNHPYIDQAIREQLDRLDHVIFAGFTHEPAERLAQRLVALTPGGL 102 (423)
T ss_pred CCCeeEEeccccEEEeCCCCEEEEcchhHHhccCCCCCHHHHHHHHHHHhhCCCccccccCCHHHHHHHHHHHHhCCCCC
Confidence 358999999999999999999999999999999999999999999999998765433 3567778999999999885 6
Q ss_pred CeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeC--C
Q 013008 156 DRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEY--G 233 (451)
Q Consensus 156 e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 233 (451)
++++|++||+||++.|+|++|.|+..++.. +|.+||.++++|||++.+++++++...+...+.+..+++.++++ +
T Consensus 103 ~~v~f~~sGseA~e~A~klar~~~~~~~~~---~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (423)
T PRK05964 103 DHVFFSDSGSVAVEVALKMALQYWRNRGEP---GRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPPD 179 (423)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHHHhcCCC---CCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCCCcc
Confidence 899999999999999999999997554432 58899999999999999999888765555555555555555554 4
Q ss_pred C-----HHHHHHhcC--CCCeEEEEEcc-ccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccccccC
Q 013008 234 N-----IEATRKLIQ--PGKTAAVFVEP-IQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYG 305 (451)
Q Consensus 234 d-----~~~le~~l~--~~~~aavi~ep-~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~ 305 (451)
| +++++++++ .+++++||+|| +++++|+++++++||++|+++|++||++||+||||+||||+|.++++++++
T Consensus 180 d~~~~~~~~l~~~l~~~~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a~~~~~ 259 (423)
T PRK05964 180 GYEQATLDALEALLEKHAGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGRTGTLFACEQAG 259 (423)
T ss_pred hhHHHHHHHHHHHHHhCCCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchhHHHhcC
Confidence 5 888898885 46899999999 699999999999999999999999999999999999999999988889999
Q ss_pred CCcceeeecccccCC-cccccccccHHHHhhccCC------CccCCCCCcHHHHHHHHHHHHHhcChHHHHH--------
Q 013008 306 IFPDIMTLAKPLAGG-LPIGAALVTEKVASAINYG------DHGSTFAGSPLVCNAAIAVLDKISNPAFLAS-------- 370 (451)
Q Consensus 306 ~~pdi~t~sK~lg~G-~~iG~v~~~~~i~~~~~~~------~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~-------- 370 (451)
+.||++++||+++|| +|+|++++++++++.+... .+++||++||++++|++++|+.++++++.++
T Consensus 260 v~pDi~~~~K~l~gG~~p~~av~~~~~i~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~l~~~~~~~~~~~~g~~l 339 (423)
T PRK05964 260 VSPDIMCLSKGLTGGYLPLAATLCTAEIFEAFYSDDRAKAFMHSPSYTANPLACAAANASLDLFEDEPVLERVAALSAGL 339 (423)
T ss_pred CCCCeeeeehhhhcCcccceEEEEcHHHHHhhhcCCcccccccCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 999999999999988 8999999999999987431 4678999999999999999999887777666
Q ss_pred ---HH--hCCCCcceecccceeEEEEecC-----ChHHHHHHHHHCCceeeecCCCCEEEEeCCCCCCHHHHHHHHHHHH
Q 013008 371 ---KL--ARNPHVKDVRGLGLIIGIEFDV-----SATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILC 440 (451)
Q Consensus 371 ---~~--~~~~~~~~v~g~G~~~~~~~~~-----~~~~~~~~l~~~Gv~~~~~~~~~~iri~~~~~~t~e~i~~~l~~l~ 440 (451)
+. .++|.+..+++.|+++++++.. ....+.+.|+++||++.+.+ +.+||+|++.+|++|||+++++|+
T Consensus 340 ~~~l~~l~~~~~i~~vrg~Gl~~~i~l~~~~~~~~~~~l~~~l~~~Gv~v~~~~--~~lR~~p~l~~t~edId~~v~~l~ 417 (423)
T PRK05964 340 AEGLEPFRDLPGVADVRVLGAIGAVELDRPVLERDGPALRAFALERGVLLRPLG--NTIYLMPPYIITAEELDRITDAIV 417 (423)
T ss_pred HHHHHhhccCCCeEEeecccEEEEEEeccCcchhHHHHHHHHHHHCCeEEEecC--CEEEEeCCcccCHHHHHHHHHHHH
Confidence 11 2356677789999999999942 25678899999999998864 689999999999999999999999
Q ss_pred HHHHHH
Q 013008 441 KTLPVL 446 (451)
Q Consensus 441 ~~l~~~ 446 (451)
++++++
T Consensus 418 ~al~~~ 423 (423)
T PRK05964 418 EVADEL 423 (423)
T ss_pred HHHhhC
Confidence 999764
No 59
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=100.00 E-value=4.2e-63 Score=497.16 Aligned_cols=381 Identities=20% Similarity=0.310 Sum_probs=318.8
Q ss_pred hhccccccchhhhccCCCCCCcchHHHHHHHHhcccccCCCCceEEEeecccEEEecCCCEEEeeccCcccccCCCCCHH
Q 013008 39 AAASVNVEVNDAARGSAGGLGRNNKEVMEAEKKLLVGTYNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDAD 118 (451)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~G~~l~d~~G~~~iD~~~~~~~~~lG~~~p~ 118 (451)
.++|.++ +++|.+.+|+|+.+..+.+ ....++|+++++++|++|||.||++||||.+++++.+|||+||+
T Consensus 4 ~~~s~~l-~~~a~~~~p~g~~~~~~~~---------~~~~~~p~~i~~a~G~~l~D~dG~~yiD~~~g~~~~~lGh~~p~ 73 (433)
T PRK00615 4 IQEMTHT-FSEACQYFPGGVNSPVRAC---------RSVGITPPIVSSASGDIFIDSLGKTFIDFCGSWGSLIHGHSHPK 73 (433)
T ss_pred cHHHHHH-HHHHHhhCCCCcCCCcccc---------cccCCCCceEEEeeeCEEEECCCCEEEEcccchhccccCCCCHH
Confidence 4577788 9999999999998887742 12236799999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccccCCCCCHHHHHHHHHHhhccC--CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEE
Q 013008 119 WIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSF--ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSF 196 (451)
Q Consensus 119 v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~ 196 (451)
|.+|+.+++++... ....++...+|+++|.+..+ .++|+|++||+||++.|+|+||.||+ |.+||.+
T Consensus 74 v~~ai~~q~~~~~~--~~~~~~~~~~la~~L~~~~~~~~~~v~f~~SGsEA~e~AiklAr~~tg---------r~~ii~~ 142 (433)
T PRK00615 74 ICDAIQQGAERGTS--YGLTSEQEILFAEELFSYLGLEDHKIRFVSSGTEATMTAVRLARGITG---------RSIIIKF 142 (433)
T ss_pred HHHHHHHHHHhCCC--CCCCCHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHHHHHHHHHHhhC---------CCEEEEE
Confidence 99999999988543 33567779999999999886 46999999999999999999999974 7899999
Q ss_pred cCCccCCh---hhhhhccCCCCcC--CCC--cCCCCCeeEeeCCCHHHHHHhcC--CCCeEEEEEccccCCCCccccCHH
Q 013008 197 TNSFHGRT---MGALALTSKEHYR--SPF--EPVMPGVNFVEYGNIEATRKLIQ--PGKTAAVFVEPIQGEGGIYSATKE 267 (451)
Q Consensus 197 ~~~yhg~~---~~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~d~~~le~~l~--~~~~aavi~ep~~~~~G~~~~~~~ 267 (451)
+++|||++ ..+++.++..... ..+ .+..+....+++||+++++++++ .+++++||+||+++++|.++|+++
T Consensus 143 ~~~yHG~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~aavI~Epv~~~~G~~~p~~~ 222 (433)
T PRK00615 143 LGCYHGHADTLLQGISFSETSLDTLTHLVDTDLAHPLTLSLPYNDFQIFQTVMNSLGHRVAGVIFEPICANMGVVLPKPG 222 (433)
T ss_pred cCccCCCCcccCcccccCCCCcCcCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhcCCceEEEEECCCCCCCCcccCCHH
Confidence 99999998 4555554322111 111 12223445678999999999986 357999999999999999999999
Q ss_pred HHHHHHHHHHHhCCEEEEeccccCCCcccccccccccCCCcceeeecccccCCcccccccccHHHHhhccCC---CccCC
Q 013008 268 FLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINYG---DHGST 344 (451)
Q Consensus 268 ~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~t~sK~lg~G~~iG~v~~~~~i~~~~~~~---~~~~t 344 (451)
||++|+++|++||++||+|||++|| |+|.+++++++++.||++||||++|||+|+|++++++++++.+... .+.+|
T Consensus 223 yl~~l~~lc~~~g~llI~DEv~tG~-R~G~~ga~~~~gv~PDi~~~gK~lggG~p~~av~~~~~i~~~~~~~~~~~~~~T 301 (433)
T PRK00615 223 FIEGIIQTCRRTGSLSIMDEVVTGF-RVAQGGAAAIYHVKPDITVYGKILGGGLPAAAVVAHKSIMDHLAPEGTIFQAGT 301 (433)
T ss_pred HHHHHHHHHHHcCCEEEEEcccccc-cccHhHHHHhcCCCCCeEEEcccccCCcceeeeeecHHHHhhhcCCCCcccCCC
Confidence 9999999999999999999999999 9999999999999999999999999999999999999999988532 36789
Q ss_pred CCCcHHHHHHHHHHHHHhcChHHHHH--------------HHhC--CCCcceecccceeEEEEecCC-------------
Q 013008 345 FAGSPLVCNAAIAVLDKISNPAFLAS--------------KLAR--NPHVKDVRGLGLIIGIEFDVS------------- 395 (451)
Q Consensus 345 ~~~~~~~~aaa~aal~~~~~~~~~~~--------------~~~~--~~~~~~v~g~G~~~~~~~~~~------------- 395 (451)
|++||++|+|++++|+++++++++++ +.++ ++ +..++ .|+|++++|...
T Consensus 302 ~~g~p~~~aa~la~L~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~g~~-v~~~r-~G~~~~i~~~~~~~~~~~~~~~~~~ 379 (433)
T PRK00615 302 LSGNPLAMAAGKASINLCREQGFYTQLSTLEQNFLSPIEEMIRSQGFP-VSLVR-YGSMFSFFFNENRPNNLAEAQLSDI 379 (433)
T ss_pred CcccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHcCCC-eEEEe-eceEEEEEEeCCCCCChHHHhhCCH
Confidence 99999999999999999987766655 1122 44 55667 899999999311
Q ss_pred --hHHHHHHHHHCCceeeecCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 013008 396 --ATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTLPVL 446 (451)
Q Consensus 396 --~~~~~~~l~~~Gv~~~~~~~~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~ 446 (451)
...+...|+++||++.+...+. ..++..||++|||+++++++++++++
T Consensus 380 ~~~~~~~~~l~~~Gv~~~~~~~~~---~~ls~~ht~~did~~~~a~~~~~~~~ 429 (433)
T PRK00615 380 EAFQTFYQSAFSKGVYLSPSPFEA---SFLSSAHSMENLDYAQNVLIDSLEKV 429 (433)
T ss_pred HHHHHHHHHHHHCCeeecCccccc---cceecCCCHHHHHHHHHHHHHHHHHH
Confidence 2368888999999998765422 24588999999999999999999875
No 60
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=100.00 E-value=1.1e-62 Score=496.47 Aligned_cols=366 Identities=36% Similarity=0.567 Sum_probs=311.1
Q ss_pred cccCC-CCceEEEeecccEEEecCCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccC-CCCCHHHHHHHHHHhh
Q 013008 74 VGTYN-RAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSN-MYYSIPQIELAKRLVA 151 (451)
Q Consensus 74 ~~~~~-~~p~~~~~~~G~~l~d~~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~ 151 (451)
.+.|. +.|+++++|+|+||||.||++||||.+++++.+|||+||+|.+|+++|+++..+... .+.++...+|+++|++
T Consensus 14 ~~~~~~~~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~lae~l~~ 93 (425)
T PRK09264 14 VRSYCRSFPVVFDKAKGSWLYDEDGKEYIDFFAGAGALNYGHNNPVLKQALIDYLQRDGITHGLDMHTTAKREFLETFEE 93 (425)
T ss_pred HhccCCCCCccEEeeecCEEEeCCCCEeeecccchhhccCCCCCHHHHHHHHHHHHhcccccccccCcHHHHHHHHHHHH
Confidence 44443 468999999999999999999999999999999999999999999999987544323 2456778999999998
Q ss_pred cc--C--CC-eEEe-cCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCC
Q 013008 152 CS--F--AD-RVFF-SNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMP 225 (451)
Q Consensus 152 ~~--~--~e-~v~~-~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~ 225 (451)
.. + .+ +++| ++||+||++.|+|+||.|++ |.+||.++++|||++.+++++++...++..+.+..+
T Consensus 94 ~~~~~~~~~~~~~f~~~sGseA~e~AlklAr~~tg---------r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~ 164 (425)
T PRK09264 94 TILKPRGLDYKVQFTGPTGTNAVEAALKLARKVTG---------RTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLN 164 (425)
T ss_pred hhcCCcCCCceEEEeCCCHHHHHHHHHHHHHHhcC---------CCeEEEECCccCCccHHHHHhcCCcccccCCCCCCC
Confidence 74 2 33 6766 48999999999999999974 788999999999999999998876655555666566
Q ss_pred CeeEeeCC--------CHHHHHHhcCC-----CCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCC
Q 013008 226 GVNFVEYG--------NIEATRKLIQP-----GKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGL 292 (451)
Q Consensus 226 ~~~~~~~~--------d~~~le~~l~~-----~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~ 292 (451)
++.++|++ |+++|+++++. +++++||+||+++++|+++++++||++|+++|++||++||+|||||||
T Consensus 165 ~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~ 244 (425)
T PRK09264 165 NVTRMPYDGYFGGDVDTLAYLEKLLEDSSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGC 244 (425)
T ss_pred CeEEeCCCCccccchhHHHHHHHHHHhccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCC
Confidence 77778774 78889998852 469999999999999999999999999999999999999999999999
Q ss_pred CcccccccccccCCCcceeeecccccC-CcccccccccHHHHhhccCCCccCCCCCcHHHHHHHHHHH-HHhcChHHHHH
Q 013008 293 GRTGYLWAHEHYGIFPDIMTLAKPLAG-GLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVL-DKISNPAFLAS 370 (451)
Q Consensus 293 gr~G~~~~~~~~~~~pdi~t~sK~lg~-G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal-~~~~~~~~~~~ 370 (451)
||+|.+++++++++.||++|+||++++ |+|+|++++++++. .+....+.+||++||+++++++++| +.++++++.++
T Consensus 245 GrtG~~~~~~~~~v~PDi~t~~K~l~~~G~pigav~~~~~i~-~~~~~~~~~T~~gnp~~~aaa~a~l~~~~~~~~l~~~ 323 (425)
T PRK09264 245 GRTGTFFSFERAGITPDIVTLSKSISGYGLPMALVLIKPELD-VWKPGEHNGTFRGNNLAFVTATAALEEYWSDDAFEKE 323 (425)
T ss_pred ccccHHHHHhhcCCCCCEEEeccccCCCccceEEEEEchhhh-ccCCCccCCCCCCCHHHHHHHHHHHHHHHhhhHHHHH
Confidence 999999899999999999999999998 89999999999874 5655567889999999999999999 66666555554
Q ss_pred --------------HHhCCCC-cceecccceeEEEEecC--ChHHHHHHHHHCCceeeecCC-CCEEEEeCCCCCCHHHH
Q 013008 371 --------------KLARNPH-VKDVRGLGLIIGIEFDV--SATPVVDACRDSGLLVLTAGK-GNVVRLVPPLIISEQEL 432 (451)
Q Consensus 371 --------------~~~~~~~-~~~v~g~G~~~~~~~~~--~~~~~~~~l~~~Gv~~~~~~~-~~~iri~~~~~~t~e~i 432 (451)
+.+++|. +..+++.|+++++++.. ....+.+.|+++||++.+.+. ++.+||.|++++|+++|
T Consensus 324 ~~~~g~~l~~~l~~l~~~~~~~~~~vrg~Gl~~~i~l~~~~~~~~l~~~~~~~Gv~~~~~~~~~~~lr~~p~l~~t~~ei 403 (425)
T PRK09264 324 VKAKGELVRERLEEIAAKYPGLGAEVRGRGMMQGIDFGDGELAGKIAAEAFENGLIIETSGPEDEVVKLLPPLTIDEEEL 403 (425)
T ss_pred HHHHHHHHHHHHHHHHHhCCCceecceecccEEEEEecChHHHHHHHHHHHHCCCEEeccCCCCCEEEEeCCCCCCHHHH
Confidence 2234663 36789999999999942 356788999999999987653 47899999999999999
Q ss_pred HHHHHHHHHHHHHHhhc
Q 013008 433 DQAVEILCKTLPVLDSN 449 (451)
Q Consensus 433 ~~~l~~l~~~l~~~~~~ 449 (451)
++++++|+++++++.+.
T Consensus 404 ~~~~~~l~~~l~~~~~~ 420 (425)
T PRK09264 404 EEGLDILEEAVAEVLAE 420 (425)
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 99999999999886543
No 61
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=100.00 E-value=3.6e-62 Score=490.37 Aligned_cols=379 Identities=36% Similarity=0.621 Sum_probs=327.0
Q ss_pred hHHHHHHHHhcccccCCCCceEEEeecccEEEecCCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHH
Q 013008 62 NKEVMEAEKKLLVGTYNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIP 141 (451)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~p~~~~~~~G~~l~d~~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~ 141 (451)
++++.+...++....|.+.|+++++++|+|+||.||++||||.+++++.+|||+||+|.+|+.++++++.+.+....++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~p~~~~~~~G~~l~d~~G~~~lD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~~~~~~~~~~~ 83 (396)
T PRK04073 4 SEKIIELTNHYGAHNYHPLPIVISEAEGVWVKDPEGNRYMDMLSAYSAVNQGHRHPKIIQALKDQADKVTLTSRAFHSDQ 83 (396)
T ss_pred HHHHHHHHHHhcccccCCCCceEEeeeecEEEECCCCEEEEcCCCHHhccCCCCCHHHHHHHHHHHhhccccccccCCHH
Confidence 44555566666666677789999999999999999999999999999999999999999999999998776554556777
Q ss_pred HHHHHHHHhhccCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCc
Q 013008 142 QIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFE 221 (451)
Q Consensus 142 ~~~l~~~l~~~~~~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~ 221 (451)
..+|+++|++..+.++++|++||+||++.|+++++.|+....+. ..++++||.++.+|||++..++++++.+.+...+.
T Consensus 84 ~~~l~~~l~~~~~~~~~~~~~SGseA~e~Alk~a~~~~~~~~g~-~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~ 162 (396)
T PRK04073 84 LGPWYEKVAKLTGKDMVLPMNTGAEAVETAIKAARRWAYDVKGV-EPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFG 162 (396)
T ss_pred HHHHHHHHHhcCCCCeEEEcCChHHHHHHHHHHHHHHhhhccCC-CCCCCEEEEECCCcCCCCHHHHhhcCCcccccCCC
Confidence 89999999998888999999999999999999999885321110 01468899999999999999998887665565666
Q ss_pred CCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccc
Q 013008 222 PVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAH 301 (451)
Q Consensus 222 ~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~ 301 (451)
+..+++..++++|++++++.+.+ ++++|++||+++++|.+.++++||++|+++|++||+++|+||+|+|||++|.++++
T Consensus 163 ~~~~~~~~~~~~d~~~l~~~i~~-~~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~ 241 (396)
T PRK04073 163 PMLPGIKKIPYGDLEALKAAITP-NTAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRTGKLFAC 241 (396)
T ss_pred CCCCCceEeCCCCHHHHHHhccc-CeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhCCCcCcHHHHh
Confidence 77788888999999999999964 68999999999999999999999999999999999999999999999999987777
Q ss_pred cccCCCcceeeecccccCC-cccccccccHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH----------
Q 013008 302 EHYGIFPDIMTLAKPLAGG-LPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS---------- 370 (451)
Q Consensus 302 ~~~~~~pdi~t~sK~lg~G-~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~---------- 370 (451)
+.+++.||+++|||++++| +|+|++++++++++.+....+..||++||++|++++++|+.++++++.++
T Consensus 242 ~~~~~~pdi~~~sK~lg~gg~~ig~~~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aaL~~~~~~~l~~~~~~~~~~l~~ 321 (396)
T PRK04073 242 DWDNVTPDMYILGKALGGGVFPISCVAANRDILGVFTPGSHGSTFGGNPLACAVSIAALEVLEEEKLPERSLELGEYFKE 321 (396)
T ss_pred hhcCCCCCEEEecccccCCCCcceEEEEcHHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 8889999999999999976 99999999999999987667888999999999999999998866555444
Q ss_pred HHhC--CCCcceecccceeEEEEecCChHHHHHHHHHCCceeeecCCCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 013008 371 KLAR--NPHVKDVRGLGLIIGIEFDVSATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTL 443 (451)
Q Consensus 371 ~~~~--~~~~~~v~g~G~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~iri~~~~~~t~e~i~~~l~~l~~~l 443 (451)
.++. .+.+..+++.|+|+++++...+..+++.|+++||++.+.+. +++||+||+.+|+|++++++++|++++
T Consensus 322 ~L~~l~~~~i~~~~~~g~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~-~~iRi~p~l~~t~e~i~~~~~~l~~~l 395 (396)
T PRK04073 322 QLKEIDNPMIKEVRGRGLFIGVELNEPARPYCEALKEEGLLCKETHE-TVIRFAPPLVITKEELDWAFEKIKAVL 395 (396)
T ss_pred HHHhhcCCcccceecceEEEEEEecchHHHHHHHHHHCCeEEecCCC-CEEEEECCcccCHHHHHHHHHHHHHHh
Confidence 1222 24566788999999998865677899999999999987654 789999999999999999999999875
No 62
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=100.00 E-value=5.7e-62 Score=488.38 Aligned_cols=364 Identities=49% Similarity=0.819 Sum_probs=320.0
Q ss_pred CCCCceEEEeecccEEEecCCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHhhccCCC
Q 013008 77 YNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFAD 156 (451)
Q Consensus 77 ~~~~p~~~~~~~G~~l~d~~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~e 156 (451)
|.+.|+++++++|+++||.||++||||.+++++.+|||+||+|.+|+.++++++.+.+..+.++...+++++|++..+.+
T Consensus 10 ~~~~~~~~~~~~G~~~~d~dG~~~lD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~ 89 (389)
T PRK01278 10 YNRADLAFERGEGVWLIDEDGERYLDFASGIAVNSLGHAHPHLVEALKEQAEKLWHVSNLYRIPEQERLAERLVENSFAD 89 (389)
T ss_pred cCCCCceEEeeecCEEEECCCCEEEECCccHhhccCCCCCHHHHHHHHHHHHhcCccccccCChHHHHHHHHHHhhCCCC
Confidence 44678999999999999999999999999999999999999999999999988655444456777999999999988888
Q ss_pred eEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHH
Q 013008 157 RVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIE 236 (451)
Q Consensus 157 ~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 236 (451)
+|+|++||+||++.|+++++.++...+.. ++++||+++++|||++..++..++.+.+...+.+..+++..++++|++
T Consensus 90 ~v~~~~sGseA~~~al~~ar~~~~~~G~~---~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 166 (389)
T PRK01278 90 KVFFTNSGAEAVECAIKTARRYHYGKGHP---ERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLVPGFDQVPFGDIE 166 (389)
T ss_pred EEEEcCCcHHHHHHHHHHHHHHHHhcCCC---CCCEEEEECCCcCCCcHHHHhccCChhhcccCCCCCCCceEeCCCCHH
Confidence 99999999999999999999886432211 367999999999999999988887666555555656777788999999
Q ss_pred HHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccccccCCCcceeeeccc
Q 013008 237 ATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKP 316 (451)
Q Consensus 237 ~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~t~sK~ 316 (451)
++++++++ ++++|++||+++++|..+++++++++|+++|++||++||+||||+||||+|.+++++++++.||+++|||+
T Consensus 167 ~l~~~l~~-~~~avivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pdi~t~sK~ 245 (389)
T PRK01278 167 ALKAAITP-NTAAILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGKLFAHEWAGVTPDIMAVAKG 245 (389)
T ss_pred HHHHhhCC-CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCcceeecccCCCCCEEEEehh
Confidence 99999965 79999999999999988999999999999999999999999999999999988887888999999999999
Q ss_pred ccCCcccccccccHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH--------------HHhCCC-Cccee
Q 013008 317 LAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS--------------KLARNP-HVKDV 381 (451)
Q Consensus 317 lg~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~--------------~~~~~~-~~~~v 381 (451)
+++|+|+|++++++++++.+....+.+||++||++|++++++|+.++++++.++ +.+.++ .+..+
T Consensus 246 l~~G~~ig~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~v 325 (389)
T PRK01278 246 IGGGFPLGACLATEEAAKGMTPGTHGSTYGGNPLAMAVGNAVLDVILAPGFLDNVQRMGLYLKQKLEGLVDRFPDVIEEV 325 (389)
T ss_pred ccCCcceEEEEEcHHHHhccCCCCCCCCCCccHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHhhCCCceeeE
Confidence 999999999999999999987777889999999999999999998866554333 223455 56778
Q ss_pred cccceeEEEEecCChHHHHHHHHHCCceeeecCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 013008 382 RGLGLIIGIEFDVSATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTLPV 445 (451)
Q Consensus 382 ~g~G~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~iri~~~~~~t~e~i~~~l~~l~~~l~~ 445 (451)
++.|+++++++..+..++++.|+++||++.|++. +.+||+|++++++++|++++++|++++++
T Consensus 326 ~g~G~~~~i~~~~~~~~~~~~l~~~GV~~~p~~~-~~lR~~p~~~~~~~~i~~~l~~l~~~l~~ 388 (389)
T PRK01278 326 RGKGLLLGLKCVVPNRDLVQALRDEGLLTVGAGD-NVVRLLPPLIITEEEIDEALERLERAAES 388 (389)
T ss_pred ecccEEEEEEEecCHHHHHHHHHHCCeEEeecCC-CEEEEeCCcccCHHHHHHHHHHHHHHHHh
Confidence 9999999998865678899999999999998865 78999999999999999999999999865
No 63
>PRK06148 hypothetical protein; Provisional
Probab=100.00 E-value=4.1e-62 Score=534.15 Aligned_cols=370 Identities=30% Similarity=0.483 Sum_probs=312.6
Q ss_pred HHHHHHHhcccccCC---CCceEEEeecccEEEecCCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCH
Q 013008 64 EVMEAEKKLLVGTYN---RAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSI 140 (451)
Q Consensus 64 ~~~~~~~~~~~~~~~---~~p~~~~~~~G~~l~d~~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~ 140 (451)
.+.+...++..+++. +.|+++++|+|+||||.||++||||.++. .++||+||+|.+|+.+|++++... ..+.++
T Consensus 587 ~~~~~~~~~~~~~~~~~~~~p~~i~~g~G~~l~D~dG~~ylD~~~g~--~~lGH~hp~v~~Ai~~q~~~l~~~-~~~~~~ 663 (1013)
T PRK06148 587 EILRERKEHLLPNLSISYSDPIKFVRGWGVWLIDNRGRAYLDCFNNV--CHVGHAHPRVVAAAARQAARLNTN-TRYLHD 663 (1013)
T ss_pred HHHHHHHHhcCcccccccCCCceEEEeeecEEEECCCCEEEEcccCh--hhcCCCCHHHHHHHHHHHhhcCCc-CCcCCH
Confidence 344444555555544 67999999999999999999999999985 679999999999999999986332 346678
Q ss_pred HHHHHHHHHhhccC--CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCC
Q 013008 141 PQIELAKRLVACSF--ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRS 218 (451)
Q Consensus 141 ~~~~l~~~l~~~~~--~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~ 218 (451)
...+|+++|++.++ .++|+|+|||+|||+.|||+||.+|+ |.+||.++++|||++.+++++++.. +..
T Consensus 664 ~~~~lAe~L~~~~p~~~~~v~f~nSGsEA~e~AlklAr~~tG---------r~~ii~~~~~YHG~t~~a~s~s~~~-~~~ 733 (1013)
T PRK06148 664 AIVAYAERLTATLPDGLTVAFFVNSGSEANSLALRLARAHTG---------QRDAIVLDHAYHGTTTELIDLSPYK-FNR 733 (1013)
T ss_pred HHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHhcC---------CCeEEEEcCCccCCCcchhhcCchh-hcc
Confidence 89999999999886 58999999999999999999999984 7889999999999999998887632 222
Q ss_pred CCcCC-CCCe--------eEeeCC--C-------HHHHHHhcC-----CCCeEEEEEccccCCCCccccCHHHHHHHHHH
Q 013008 219 PFEPV-MPGV--------NFVEYG--N-------IEATRKLIQ-----PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDA 275 (451)
Q Consensus 219 ~~~~~-~~~~--------~~~~~~--d-------~~~le~~l~-----~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l 275 (451)
++.+. .+++ ...|++ | .+.+++.++ .+++++||+||+++++|.++++++||++|+++
T Consensus 734 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~l 813 (1013)
T PRK06148 734 KGGKGRPDHVEVAEVPDSYRGPERWPDAEHGRRFAESVAEQIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAM 813 (1013)
T ss_pred cCCCCCCCCceEcCCCCccccCCCCChhhhHHHHHHHHHHHHHhhhccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHH
Confidence 22211 1222 233454 2 134665553 35799999999999999999999999999999
Q ss_pred HHHhCCEEEEeccccCCCcccc-cccccccCCCcceeeecccccCCcccccccccHHHHhhccCC-CccCCCCCcHHHHH
Q 013008 276 CDDAGALLVFDEVQCGLGRTGY-LWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINYG-DHGSTFAGSPLVCN 353 (451)
Q Consensus 276 ~~~~g~llI~DEv~tg~gr~G~-~~~~~~~~~~pdi~t~sK~lg~G~~iG~v~~~~~i~~~~~~~-~~~~t~~~~~~~~a 353 (451)
|++||+++|+|||+|||||+|. +|+++++|+.|||+|+||++|||+|+|++++++++++.+..+ .+.+||++||++|+
T Consensus 814 c~~~g~llI~DEVqtGfGRtG~~~~a~e~~gv~PDivt~gK~lggG~Plgav~~~~ei~~~~~~g~~~~~Tf~gnpla~a 893 (1013)
T PRK06148 814 VRAAGGVCIADEVQVGFGRVGSHWWAFETQGVVPDIVTMGKPIGNGHPMGAVVTTREIADSFDNGMEYFNTFGGNPVSCA 893 (1013)
T ss_pred HHHhCCEEEEEecccCCCCCCCcchhhhhcCCCcceeeecccccCCcceEEEEEcHHHHhhccCCCccccCCCCCHHHHH
Confidence 9999999999999999999997 899999999999999999999999999999999999998765 47899999999999
Q ss_pred HHHHHHHHhcChHHHHH--------------HHhCCCCcceecccceeEEEEecC------C----hHHHHHHHHHCCce
Q 013008 354 AAIAVLDKISNPAFLAS--------------KLARNPHVKDVRGLGLIIGIEFDV------S----ATPVVDACRDSGLL 409 (451)
Q Consensus 354 aa~aal~~~~~~~~~~~--------------~~~~~~~~~~v~g~G~~~~~~~~~------~----~~~~~~~l~~~Gv~ 409 (451)
|++++|++++++++.++ +.+++|.+.+++|.|+|+++++.. . ...+.+.|+++||+
T Consensus 894 aa~a~L~~i~~e~l~~~~~~~G~~l~~~L~~l~~~~~~i~~VrG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~~~~~Gvl 973 (1013)
T PRK06148 894 IGLAVLDIIEDEDLQRNALEIGNYLLAGLRELQDRFDIIGDVRGMGLFLGIELVTDRKTKAPATAIARYVKNGARERGIL 973 (1013)
T ss_pred HHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCceEEeeeceEEEEEecCCccccCccHHHHHHHHHHHHhCCeE
Confidence 99999999988877766 446788889999999999999931 1 34578889999999
Q ss_pred eeecCC-CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 013008 410 VLTAGK-GNVVRLVPPLIISEQELDQAVEILCKTLPVL 446 (451)
Q Consensus 410 ~~~~~~-~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~ 446 (451)
+.+.+. ++++||.||+++|+++||+++++|+++++++
T Consensus 974 ~~~~g~~~~vlr~~Ppl~it~~~id~~l~~l~~~l~~~ 1011 (1013)
T PRK06148 974 IGTEGPHDNVLKIRPPLIFSRADADHLLEVLDDVLAAA 1011 (1013)
T ss_pred EeccCCCCCEEEEeCCccCCHHHHHHHHHHHHHHHHHH
Confidence 987653 5899999999999999999999999999875
No 64
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=100.00 E-value=1.4e-61 Score=486.62 Aligned_cols=375 Identities=26% Similarity=0.389 Sum_probs=295.6
Q ss_pred chHHHHHHHHhcccccCCCCceEEEeecccEEEecCCCEEEeeccCcccccCCCCCHHHHHHHHHH--HhhcccccCCCC
Q 013008 61 NNKEVMEAEKKLLVGTYNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQ--ANVLTHVSNMYY 138 (451)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~G~~l~d~~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~--~~~~~~~~~~~~ 138 (451)
.++.+.++..++......++|+.+++++|+||||.||++||||++++++.++||+||+|++|+.++ ...+.+.+ .+.
T Consensus 21 ~s~~l~~~~~~~~~~~~~~~p~~~~~a~G~~l~D~dG~~ylD~~sg~~~~~lGh~~p~i~~Ai~~q~~~~~l~~~~-~~~ 99 (464)
T TIGR00699 21 KSKAAMKQLNEVFDARAVHFLADYEKSRGNYLVDVDGNRLLDLYSQISSIPIGYNNPALLKAAQSPEMATTLINRP-ALG 99 (464)
T ss_pred cHHHHHHHHHhhhcccCcccceEEEecccCEEEeCCCCEEEEccCCHhhhcCCCCCHHHHHHHHHHHHHHhhcccc-cCC
Confidence 444555555554322222679999999999999999999999999999999999999999999985 33433333 255
Q ss_pred CHHHHHHHHHHhh----ccC--CCeEEecCCHHHHHHHHHHHHHHHhhhcCCC------------------CCCCCceEE
Q 013008 139 SIPQIELAKRLVA----CSF--ADRVFFSNTGTEANEAAIKFARKFQRHSNPD------------------SKEPATEFV 194 (451)
Q Consensus 139 ~~~~~~l~~~l~~----~~~--~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~------------------~~~~~~~ii 194 (451)
++...+|+++|.+ ..+ .++|+|++||+|||+.|+|+|+.|++..++. ...++.+||
T Consensus 100 ~~~~~~la~~l~~~l~~~~p~~~~~v~f~~SGsEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii 179 (464)
T TIGR00699 100 NFPSKDWAKILKEGILKVAPKGQDQVWTGMSGSDANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSIL 179 (464)
T ss_pred cHHHHHHHHHHHHhHHhhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCEEE
Confidence 6678889999865 443 5899999999999999999999987532110 001134899
Q ss_pred EEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeC-------------------CCHHHHHHhcC--CCCeEEEEEc
Q 013008 195 SFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEY-------------------GNIEATRKLIQ--PGKTAAVFVE 253 (451)
Q Consensus 195 ~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~d~~~le~~l~--~~~~aavi~e 253 (451)
.++++|||++.+++++++.+...... +..+++.++|+ +++++++++++ .+++++||+|
T Consensus 180 ~~~~syHG~t~~als~t~~~~~~~~~-~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~iAAvI~E 258 (464)
T TIGR00699 180 SFKGAFHGRLFGSLSTTRSKPIHKLD-IPAFDWPQAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKWHKPVAAIIVE 258 (464)
T ss_pred EECCCcCCccHHHHHhcCCccccccC-CCCCCceecCCCCcccccccccccchhHHHHHHHHHHHHHHhcCCcEEEEEEe
Confidence 99999999999999987654322211 11122222222 24677888885 3579999999
Q ss_pred cccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccccccCCC--cceeeeccccc-CCcccccccccH
Q 013008 254 PIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIF--PDIMTLAKPLA-GGLPIGAALVTE 330 (451)
Q Consensus 254 p~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~--pdi~t~sK~lg-~G~~iG~v~~~~ 330 (451)
|+++++|.++++++||++|+++|++||++||+|||+|||||+|.+|+++++|+. ||++|+||+++ +|+. +.++
T Consensus 259 Pv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGrtG~~fa~e~~gv~~~PDi~t~gK~lg~gG~~----~~~~ 334 (464)
T TIGR00699 259 PIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDEVQTGVGATGKFWAHEHWNLDDPPDMVTFSKKFQTAGYF----FHDP 334 (464)
T ss_pred CCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeeeeeCCCCCcchhHHHhcCCCCCCCEEEehhhhccCCcc----ccch
Confidence 999999999999999999999999999999999999999999999999999997 99999999996 5653 2333
Q ss_pred HHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH--------------HHhCCC-Ccceec--ccceeEEEEec
Q 013008 331 KVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS--------------KLARNP-HVKDVR--GLGLIIGIEFD 393 (451)
Q Consensus 331 ~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~--------------~~~~~~-~~~~v~--g~G~~~~~~~~ 393 (451)
.+.......+++||++||++|+|++++|+.++++++.++ +.+++| .+..+| |.|+|+++++.
T Consensus 335 -~~~~~~~~~~~~T~~gnp~~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vRg~G~Glm~gie~~ 413 (464)
T TIGR00699 335 -AFRPNKPYRQFNTWMGDPSRALILREIIQEIKRKDLLENVAHVGDYLYTGLEDLQKKYPEFIQNLRGKGRGTFIAWDTP 413 (464)
T ss_pred -hccCCCCcccccCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCceeeecccCeEEEEEEecC
Confidence 222222346889999999999999999999988776665 335578 688899 99999999984
Q ss_pred C--ChHHHHHHHHHCCceeeecCCCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 013008 394 V--SATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTL 443 (451)
Q Consensus 394 ~--~~~~~~~~l~~~Gv~~~~~~~~~~iri~~~~~~t~e~i~~~l~~l~~~l 443 (451)
. ....+.+.|+++|+++.+.+. +++||.||+++|++||++++++|++++
T Consensus 414 ~~~~~~~i~~~~~~~Gvl~~~~g~-~~ir~~Ppl~it~~eid~~~~~l~~~~ 464 (464)
T TIGR00699 414 DEAKRDKLLKKARNNGVNIGGCGV-KAIRLRPMLVFQKHHADIFLEIISKII 464 (464)
T ss_pred CHHHHHHHHHHHHHCCcEEecCCC-CeEEEeCCCCCCHHHHHHHHHHHHHhC
Confidence 2 256788999999999988764 789999999999999999999998864
No 65
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=100.00 E-value=6e-60 Score=475.40 Aligned_cols=366 Identities=43% Similarity=0.771 Sum_probs=316.2
Q ss_pred cCCCCceEEEeecccEEEecCCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHhhccCC
Q 013008 76 TYNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFA 155 (451)
Q Consensus 76 ~~~~~p~~~~~~~G~~l~d~~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 155 (451)
.|.+.|+++++++|+++||.||++||||++|+++.+|||+||+|.+|+.+++++..+....+.++...+|+++|++..+.
T Consensus 18 ~~~~~~~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 97 (403)
T PRK05093 18 NYAPAEFIPVRGEGSRVWDQQGKEYIDFAGGIAVTALGHCHPALVKALKEQGEKLWHISNVFTNEPALRLAKKLIDATFA 97 (403)
T ss_pred hcCCCCeeEEEeecCEEEeCCCCEEEEcCcCHHhccCCCCCHHHHHHHHHHHHhcCcccCccCCHHHHHHHHHHHhhCCC
Confidence 35678999999999999999999999999999999999999999999999998754433334567788999999998888
Q ss_pred CeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCH
Q 013008 156 DRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNI 235 (451)
Q Consensus 156 e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 235 (451)
++++|++||+|||+.|+++++.++..+... ++++||.++.+|||++..++++++.+.+..++.+...++..+++||+
T Consensus 98 ~~~~~~~sGseA~e~a~klar~~~~~~~~~---~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 174 (403)
T PRK05093 98 ERVFFANSGAEANEAAFKLARRYACDRHGP---EKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVPFNDL 174 (403)
T ss_pred CEEEEeCchHHHHHHHHHHHHHHHhhcCCC---CCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEeCCCCH
Confidence 899999999999999999999987533222 47889999999999999888877665555555565667888999999
Q ss_pred HHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccccccCCCcceeeecc
Q 013008 236 EATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAK 315 (451)
Q Consensus 236 ~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~t~sK 315 (451)
+++++.+. +++++|++||+++++|.++++++|+++|+++|++||+++|+||||+|||++|.+++.+++++.||+.+|||
T Consensus 175 ~~l~~~l~-~~~aaiiiep~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pdi~s~sK 253 (403)
T PRK05093 175 AAVKAVID-DHTCAVVVEPIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTGDLFAYMHYGVTPDILTSAK 253 (403)
T ss_pred HHHHHHhc-CCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCCCCCEEEecc
Confidence 99999996 46999999999999999889999999999999999999999999999999998777778899999999999
Q ss_pred cccCCcccccccccHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH----------HHh----CCCCccee
Q 013008 316 PLAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS----------KLA----RNPHVKDV 381 (451)
Q Consensus 316 ~lg~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~----------~~~----~~~~~~~v 381 (451)
++++|+|+|++++++++++.+....+..|++++|+.|+++.++|+.+..+++.++ .++ +++.+..+
T Consensus 254 ~l~~G~rig~vv~~~~i~~~l~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~ 333 (403)
T PRK05093 254 ALGGGFPIGAMLTTAEIASHFKVGTHGSTYGGNPLACAVAEAVFDIINTPEVLEGVKARRQRFVDGLQKINQKYGVFSEI 333 (403)
T ss_pred cccCCcceEEEEEcHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCeEeE
Confidence 9999999999999999999987666778999999999999999998866555544 111 23444567
Q ss_pred cccceeEEEEecC----ChHHHHHHHHHCCceeeecCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 013008 382 RGLGLIIGIEFDV----SATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTLPVL 446 (451)
Q Consensus 382 ~g~G~~~~~~~~~----~~~~~~~~l~~~Gv~~~~~~~~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~ 446 (451)
++.|+++++.+.. ...+++..|+++||++.+.+. +.+|++|++.+++++|++++++|+++++++
T Consensus 334 ~~~G~~~~~~l~~~~~~~~~~~~~~l~~~Gv~v~~~g~-~~lRl~~~~~~~~~~i~~~~~~l~~~l~~~ 401 (403)
T PRK05093 334 RGMGLLIGAELKPQYKGRARDFLNAAAEEGVMVLVAGP-DVLRFAPSLVIEEADIDEGLARFEKAVAKV 401 (403)
T ss_pred eeCceEEEEEecCcchhHHHHHHHHHHHCCeEEecCCC-CEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 8889999998842 356899999999999998765 789999999999999999999999998764
No 66
>PRK08297 L-lysine aminotransferase; Provisional
Probab=100.00 E-value=4.9e-60 Score=477.75 Aligned_cols=362 Identities=28% Similarity=0.456 Sum_probs=291.1
Q ss_pred CCceEEEeecccEEEec-CCCEEEeeccCcccccCCCCCHHHHH--HHHHHHhhccc--cc-CCCCCHHHHHHHHHHhhc
Q 013008 79 RAPVVLASGKGCKLYDA-EGREYLDLSSGIAVNALGHGDADWIK--AVVDQANVLTH--VS-NMYYSIPQIELAKRLVAC 152 (451)
Q Consensus 79 ~~p~~~~~~~G~~l~d~-~G~~~iD~~~~~~~~~lG~~~p~v~~--a~~~~~~~~~~--~~-~~~~~~~~~~l~~~l~~~ 152 (451)
+.++.+++++|+|+||. ||++||||.+++++.+|||+||+|.+ |+.+|+++..+ .+ ..+.++...+|+++|++.
T Consensus 25 p~~~~i~~a~G~~l~D~~dG~~ylD~~~g~~~~~lGh~~p~v~~~~ai~~ql~~l~~~~~~~~~~~~~~~~~la~~l~~~ 104 (443)
T PRK08297 25 DLVLDLERSQGSYLVDARTGRRYLDMFTFFASSALGMNHPALADDPEFRAELGRAALNKPSNSDVYTVEMARFVDTFARV 104 (443)
T ss_pred CcceEEEeccCCEEEECCCCCEeeecccCHhhhcCCCCChHHhhHHHHHHHHHHhhhhccccCCcCCHHHHHHHHHHHhh
Confidence 34445899999999995 99999999999999999999999999 99999987542 22 235677789999999998
Q ss_pred c-C--CCeEEecCCHHHHHHHHHHHHHHHhhh----cCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCC-
Q 013008 153 S-F--ADRVFFSNTGTEANEAAIKFARKFQRH----SNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVM- 224 (451)
Q Consensus 153 ~-~--~e~v~~~~sG~eA~~~al~~a~~~~~~----~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~- 224 (451)
. + .++|+|++||+||++.|+|+|+.|+.. ++.+ .++|.+||.+.++|||++.+++++++.......+.+..
T Consensus 105 ~~p~~~~~v~f~~SGsEAve~AlKlAr~~~~~~~~~~g~~-~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~ 183 (443)
T PRK08297 105 LGDPELPHLFFVDGGALAVENALKVAFDWKSRKNEARGID-PALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFD 183 (443)
T ss_pred cCCCCCCEEEEeCchHHHHHHHHHHHHHHhhccccccCCC-CCCCceEEEECCCcCCcchhhhhhcCCcccccccCCCCC
Confidence 7 3 679999999999999999999998642 1210 01368899999999999999998876422211111110
Q ss_pred ------CCee------------EeeCCCHHHHHHhcC--CCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEE
Q 013008 225 ------PGVN------------FVEYGNIEATRKLIQ--PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLV 284 (451)
Q Consensus 225 ------~~~~------------~~~~~d~~~le~~l~--~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI 284 (451)
+.+. ..+++|++++++++. ++++++||+||+++++|+++|+++||++|+++|++||++||
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI 263 (443)
T PRK08297 184 WPRIDNPKLRFPLPGEDLEEVEALEAEALAQARAAFERHPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLI 263 (443)
T ss_pred ccccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEE
Confidence 1110 011224566777775 46899999999999999999999999999999999999999
Q ss_pred EeccccCCCcccccccccccCCCcceeeecccccCCcccccccccHHHHhh----cc-CCCccCCCCCcHHHHHHHHHHH
Q 013008 285 FDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASA----IN-YGDHGSTFAGSPLVCNAAIAVL 359 (451)
Q Consensus 285 ~DEv~tg~gr~G~~~~~~~~~~~pdi~t~sK~lg~G~~iG~v~~~~~i~~~----~~-~~~~~~t~~~~~~~~aaa~aal 359 (451)
+|||+|||||+|.+|+++++++.||++||||+++ +|++++.+++.+. +. ...+.+||++||++|++++++|
T Consensus 264 ~DEV~tGfGRtG~~~a~~~~gv~PDiv~~gK~l~----~~a~l~~~~i~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L 339 (443)
T PRK08297 264 FDEVQTGVGLTGTAWAYQQLGVRPDIVAFGKKTQ----VCGIMAGRRVDEVEDNVFAVSSRINSTWGGNLVDMVRARRIL 339 (443)
T ss_pred EechhhccCccchHHHHHhcCCCCCEEEeccccc----ccceecchHHHHhhhhhccCccccCCCCCccHHHHHHHHHHH
Confidence 9999999999999999999999999999999983 4555555554332 21 2357899999999999999999
Q ss_pred HHhcChHHHHH--------------HHhCCCCcc-eecccceeEEEEecC--ChHHHHHHHHHCCceeeecCCCCEEEEe
Q 013008 360 DKISNPAFLAS--------------KLARNPHVK-DVRGLGLIIGIEFDV--SATPVVDACRDSGLLVLTAGKGNVVRLV 422 (451)
Q Consensus 360 ~~~~~~~~~~~--------------~~~~~~~~~-~v~g~G~~~~~~~~~--~~~~~~~~l~~~Gv~~~~~~~~~~iri~ 422 (451)
++++++++.++ +.+++|.+. +++|.|+|+++++.. ....+++.|+++||++.|.+. +.+||+
T Consensus 340 ~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~~vrg~G~~~~i~~~~~~~~~~~~~~l~~~Gvl~~~~~~-~~lr~~ 418 (443)
T PRK08297 340 EVIEEDGLVENAARQGEYLLARLEELAAEFPAVVSNVRGRGLMCAFDLPTTADRDEVIRRLWEEGVLVLPCGE-RSIRFR 418 (443)
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHHHHHHHCCCcceeeeccceEEEEEecCHHHHHHHHHHHHHCCEEEecCCC-CeEEEE
Confidence 99987776665 334567554 899999999999942 245788999999999988765 789999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHH
Q 013008 423 PPLIISEQELDQAVEILCKTLPVL 446 (451)
Q Consensus 423 ~~~~~t~e~i~~~l~~l~~~l~~~ 446 (451)
||+++|++|||+++++|+++++++
T Consensus 419 P~l~~t~~eid~~l~~l~~~l~~~ 442 (443)
T PRK08297 419 PALTVTTEEIDAAIDALRRALPEV 442 (443)
T ss_pred CCccCCHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999865
No 67
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=100.00 E-value=2e-59 Score=472.04 Aligned_cols=360 Identities=31% Similarity=0.514 Sum_probs=304.1
Q ss_pred ceEEEeecccEEEecCCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccC-CCCCHHHHHHHHHHhhccC--CCe
Q 013008 81 PVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSN-MYYSIPQIELAKRLVACSF--ADR 157 (451)
Q Consensus 81 p~~~~~~~G~~l~d~~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~~--~e~ 157 (451)
++.+++++|.++||.||++||||++++++.+|||+||+|.+|+.++++++.+... ...++...+++++|++..+ .++
T Consensus 28 ~~~~~~a~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~ 107 (427)
T TIGR00508 28 VYPVESADGVELTLDDGRRLIDGMSSWWAAIHGYNHPRLNAAAQKQIDKMSHVMFGGFTHKPAIELCQKLVKMTPNALDC 107 (427)
T ss_pred CceEEeeeeeEEEeCCCCEEEEccchHHHhcCCCCCHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHhhCCCCCCE
Confidence 4668999999999999999999999999999999999999999999998765433 3456778999999999875 589
Q ss_pred EEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCC-CcCCCCcCCCCCeeEee-----
Q 013008 158 VFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKE-HYRSPFEPVMPGVNFVE----- 231 (451)
Q Consensus 158 v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~----- 231 (451)
|+|++||+||++.|+++++.++..++.+ ++.+||.++.+|||.+.+++++++.. .++..+.+..+++..++
T Consensus 108 v~f~~sGseA~e~AlklAr~~~~~~~~~---~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 184 (427)
T TIGR00508 108 VFLADSGSVAVEVALKMALQYWQAKGEK---NRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPAPQNR 184 (427)
T ss_pred EEEeCCcHHHHHHHHHHHHHHHHhhCCC---CccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEcCCCCcc
Confidence 9999999999999999999998644332 47899999999999999998887632 22223333333332221
Q ss_pred ----C--CCHHHHHHhcC--CCCeEEEEEccc-cCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCccccccccc
Q 013008 232 ----Y--GNIEATRKLIQ--PGKTAAVFVEPI-QGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHE 302 (451)
Q Consensus 232 ----~--~d~~~le~~l~--~~~~aavi~ep~-~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~ 302 (451)
+ +|+++++++++ .+++++||+||+ ++++|..+++.+||++|+++|++||++||+||||+||||+|.+|+++
T Consensus 185 ~~~~~~~~~~~~l~~~l~~~~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~Gr~G~~~~~~ 264 (427)
T TIGR00508 185 FDEEWNEEAITPLAKLMELHSDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIATGFGRTGKLFACE 264 (427)
T ss_pred ccchhHHHHHHHHHHHHHhcCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCccchhh
Confidence 1 25778888886 457999999997 99999999999999999999999999999999999999999999999
Q ss_pred ccCCCcceeeecccccCC-cccccccccHHHHhhccCC-----CccCCCCCcHHHHHHHHHHHHHhcChHHHHH------
Q 013008 303 HYGIFPDIMTLAKPLAGG-LPIGAALVTEKVASAINYG-----DHGSTFAGSPLVCNAAIAVLDKISNPAFLAS------ 370 (451)
Q Consensus 303 ~~~~~pdi~t~sK~lg~G-~~iG~v~~~~~i~~~~~~~-----~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~------ 370 (451)
++++.||++++||+++|| +|++++++++++++.+... .+.+||++||+++++++++|++++++++.++
T Consensus 265 ~~~v~pDi~~~gK~l~gG~~p~~a~~~~~~~~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~l~~~~~~~~~~~~~~ 344 (427)
T TIGR00508 265 HAGVVPDILCVGKALTGGYMTLSATVTTDKVAQTISSGEAGCFMHGPTFMGNPLACAVAEASLAILLEGEWQKQVSAIEN 344 (427)
T ss_pred hcCCCCCEEEechhhhcCcccceEEEEcHHHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 999999999999999999 5999999999999988642 3678999999999999999999887776655
Q ss_pred -----H--HhCCCCcceecccceeEEEEec--CChHHHHHHHHHCCceeeecCCCCEEEEeCCCCCCHHHHHHHHHHHHH
Q 013008 371 -----K--LARNPHVKDVRGLGLIIGIEFD--VSATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCK 441 (451)
Q Consensus 371 -----~--~~~~~~~~~v~g~G~~~~~~~~--~~~~~~~~~l~~~Gv~~~~~~~~~~iri~~~~~~t~e~i~~~l~~l~~ 441 (451)
+ +..++.+..+++.|+++.+++. .....+.+.|+++||++.+.+ +.+|++||+++|++|||++++++++
T Consensus 345 ~l~~~L~~l~~~~~i~~vrg~G~~~~i~~~~~~~~~~~~~~l~~~Gv~~~~~~--~~l~~~ppl~~t~~~id~~~~~l~~ 422 (427)
T TIGR00508 345 QLKRELSPLRKNPVVKDVRVLGAIGVVEMYKPVNVEELQKKFVEQGVWIRPFG--KLIYVMPPYIITTEQLQKLTAALIE 422 (427)
T ss_pred HHHHHHHHhhcCCCEEeEeccccEEEEEECCccCHHHHHHHHHHCCeEEEecC--CEEEEECCCCCCHHHHHHHHHHHHH
Confidence 1 1234556789999999999983 346789999999999998764 6799999999999999999999999
Q ss_pred HHHH
Q 013008 442 TLPV 445 (451)
Q Consensus 442 ~l~~ 445 (451)
++++
T Consensus 423 ~l~~ 426 (427)
T TIGR00508 423 ALHE 426 (427)
T ss_pred HHhc
Confidence 9864
No 68
>PRK06149 hypothetical protein; Provisional
Probab=100.00 E-value=1.8e-59 Score=513.43 Aligned_cols=373 Identities=27% Similarity=0.466 Sum_probs=307.5
Q ss_pred chHHHHHHHHhcccc---cCCCCceEEEeecccEEEecCCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccCCC
Q 013008 61 NNKEVMEAEKKLLVG---TYNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMY 137 (451)
Q Consensus 61 ~~~~~~~~~~~~~~~---~~~~~p~~~~~~~G~~l~d~~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~ 137 (451)
...++.++..++... .+.+.|+++++++|.|+||.||++||||.+++. ++||+||+|.+|+.+|++++.+.+ .+
T Consensus 545 ~~~~l~~~~~~~~~~~~~~~~~~p~~i~~g~G~~l~D~dG~~ylD~~~~~~--~lGh~hp~v~~Ai~~q~~~l~~~~-~~ 621 (972)
T PRK06149 545 DAAALLARRDASFARVQKHYYADPPQIERGWRHHLFDMAGRSYLDMVNNVT--VLGHGHPRLAAAAARQWSLLNTNS-RF 621 (972)
T ss_pred CHHHHHHHHHHhhccchhhcccCCCeEEEeeeeEEEeCCCCEEEECCCCcc--ccCCCCHHHHHHHHHHHHhccccc-cc
Confidence 455666666555544 234568899999999999999999999998864 799999999999999999865433 34
Q ss_pred CCHHHHHHHHHHhhccC--CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCC
Q 013008 138 YSIPQIELAKRLVACSF--ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEH 215 (451)
Q Consensus 138 ~~~~~~~l~~~l~~~~~--~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~ 215 (451)
.++...+|+++|++.++ .++++|++||+|||+.|+|+||++++ +.+||.++.+|||++.++.++++...
T Consensus 622 ~~~~~~elae~L~~~~p~~~~~v~f~~SGsEA~e~AlklAr~~tg---------r~~ii~~~~~yHG~t~ga~~~s~~~~ 692 (972)
T PRK06149 622 HYAAVAEFSERLAALAPDGLDTVFLVNSGSEANDLAIRLAWAASG---------RRDVVSVLEAYHGWTVATDAVSTSIA 692 (972)
T ss_pred cCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHHHHHHHHhcC---------CCeEEEEeCCCCCcChhHhhhcCCcc
Confidence 56778999999999984 78999999999999999999999974 78899999999999998877654211
Q ss_pred cCCCC-cCCCCCee--------EeeCC--C-----HHHHHHhcC-----CCCeEEEEEccccCCCCccccCHHHHHHHHH
Q 013008 216 YRSPF-EPVMPGVN--------FVEYG--N-----IEATRKLIQ-----PGKTAAVFVEPIQGEGGIYSATKEFLQFLRD 274 (451)
Q Consensus 216 ~~~~~-~~~~~~~~--------~~~~~--d-----~~~le~~l~-----~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~ 274 (451)
..... .+...++. ..+++ | .+++++.++ .+++++||+||+++++|+++++++||++|++
T Consensus 693 ~~~~~~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~ 772 (972)
T PRK06149 693 DNPQALETRPDWVHPVESPNTYRGRFRGADSAADYVRDVVAQLEELDASGRGLAGFICEPVYGNAGGIALPPGYLQQVYA 772 (972)
T ss_pred ccccccCCCCCCeEEeCCCcccCCcCCCcccHHHHHHHHHHHHHHHhhcCCceEEEEEcccccCCCcccCCHHHHHHHHH
Confidence 11111 11111121 12222 2 244444432 4679999999999999999999999999999
Q ss_pred HHHHhCCEEEEeccccCCCcccc-cccccccCCCcceeeecccccCCcccccccccHHHHhhccC-CCccCCCCCcHHHH
Q 013008 275 ACDDAGALLVFDEVQCGLGRTGY-LWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINY-GDHGSTFAGSPLVC 352 (451)
Q Consensus 275 l~~~~g~llI~DEv~tg~gr~G~-~~~~~~~~~~pdi~t~sK~lg~G~~iG~v~~~~~i~~~~~~-~~~~~t~~~~~~~~ 352 (451)
+|++||+++|+|||+|||||+|+ +|+++++|+.|||+|+||++|||+|+|++++++++++.+.. ..+.+|+++||++|
T Consensus 773 lc~~~g~llI~DEV~tGfGRtG~~~~a~e~~gv~PDivt~gK~lg~G~Pl~av~~~~~i~~~~~~~~~~~sT~~gnP~~~ 852 (972)
T PRK06149 773 AVRARGGVCIADEVQVGYGRLGHYFWGFEQQGVVPDIITMAKGMGNGHPLGAVITRREIAEALEAEGYFFSSTGGSPVSC 852 (972)
T ss_pred HHHHcCCEEEEEeehhcCCccCccchhhhhcCCCCCEEEecccccCCeeeEEEEEcHHHHhhhccCCcccCCCCCCHHHH
Confidence 99999999999999999999997 67999999999999999999999999999999999998864 34567899999999
Q ss_pred HHHHHHHHHhcChHHHHH--------------HHhCCCCcceecccceeEEEEecC----------ChHHHHHHHHHCCc
Q 013008 353 NAAIAVLDKISNPAFLAS--------------KLARNPHVKDVRGLGLIIGIEFDV----------SATPVVDACRDSGL 408 (451)
Q Consensus 353 aaa~aal~~~~~~~~~~~--------------~~~~~~~~~~v~g~G~~~~~~~~~----------~~~~~~~~l~~~Gv 408 (451)
+|++++|++++++++.++ +.+++|.+..+||.|+|+++++.. ....+++.|+++||
T Consensus 853 aaala~L~~i~~e~l~~~~~~~G~~l~~~L~~l~~~~~~i~~vrG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~l~~~Gv 932 (972)
T PRK06149 853 RIGMAVLDVLREEKLQENARRVGDHLKARLEALADRHPLIGAVHGMGLYLGVELVRDRQTLEPATEETAAICDRLLELGV 932 (972)
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEeecceEEEEEEecCcccCCCChHHHHHHHHHHHhCCe
Confidence 999999999988777666 345688899999999999999821 13568889999999
Q ss_pred eeeecCC-CCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 013008 409 LVLTAGK-GNVVRLVPPLIISEQELDQAVEILCKTLPV 445 (451)
Q Consensus 409 ~~~~~~~-~~~iri~~~~~~t~e~i~~~l~~l~~~l~~ 445 (451)
++.+.+. ++++||.||+++|++++++++++|++++.+
T Consensus 933 l~~~~g~~~~vl~~~Ppl~it~~~id~~~~~l~~~l~~ 970 (972)
T PRK06149 933 IMQPTGDHLNILKIKPPLCLDRESADFFVDMLDRVLTE 970 (972)
T ss_pred EEeecCCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHh
Confidence 9998764 478999999999999999999999999975
No 69
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=100.00 E-value=1.8e-59 Score=475.11 Aligned_cols=380 Identities=26% Similarity=0.399 Sum_probs=314.5
Q ss_pred cccccchhhhccCCCCCCcchHHHHHHHHhcccccCCCCceEEEeecccEEEecCCCEEEeeccCcccccCCCCCHHHHH
Q 013008 42 SVNVEVNDAARGSAGGLGRNNKEVMEAEKKLLVGTYNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIK 121 (451)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~G~~l~d~~G~~~iD~~~~~~~~~lG~~~p~v~~ 121 (451)
|.++ +++|.+.+|||+..+.+.+ ..-.+.|+++++++|++|||.||++||||.+|+++.++||+||+|++
T Consensus 2 s~~~-~~~~~~~~~~g~~~~~~~~---------~~~~~~p~~~~~~~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~ 71 (423)
T TIGR00713 2 SENL-FEEAKQVFPGGVNSPVRAF---------KSVGPTPFFVARGKGAYLYDVDGNEYIDYVLSWGPLILGHAHPRVVE 71 (423)
T ss_pred cHHH-HHHHHhhCCCCCCCccccc---------ccCCCCCeeEEeccCCEEEeCCCCEEEEccccccccccCCCCHHHHH
Confidence 6677 9999999999986544321 01125689999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcccccCCCCCHHHHHHHHHHhhccC-CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCc
Q 013008 122 AVVDQANVLTHVSNMYYSIPQIELAKRLVACSF-ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSF 200 (451)
Q Consensus 122 a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~y 200 (451)
|+++++++..+ ..++++...+|+++|++.++ .++|+|++||+||++.|+++++.|++ +++||.++++|
T Consensus 72 ai~~q~~~~~~--~~~~~~~~~~lae~l~~~~~~~~~v~~~~sGseA~e~Alk~ar~~~g---------r~~ii~~~~~y 140 (423)
T TIGR00713 72 AVKEALERGTS--YGAPTEAEILLAKEIISRVPSVEMVRFVNSGTEATMSAVRLARGYTG---------RDKIIKFEGCY 140 (423)
T ss_pred HHHHHHHhCCc--CCCCCHHHHHHHHHHHHhCCcccEEEEeCCHHHHHHHHHHHHHHhhC---------CCEEEEEcCCC
Confidence 99999988543 23456678999999999886 67999999999999999999999974 78999999999
Q ss_pred cCChhhhhhccCC--CCcCCCCcCC-----CCCeeEeeCCCHHHHHHhcC--CCCeEEEEEccccCCCCccccCHHHHHH
Q 013008 201 HGRTMGALALTSK--EHYRSPFEPV-----MPGVNFVEYGNIEATRKLIQ--PGKTAAVFVEPIQGEGGIYSATKEFLQF 271 (451)
Q Consensus 201 hg~~~~~~~~~~~--~~~~~~~~~~-----~~~~~~~~~~d~~~le~~l~--~~~~aavi~ep~~~~~G~~~~~~~~l~~ 271 (451)
||++.....+++. .....++.+. .+....+|++|+++|+++++ .+++++||+||+++++|.++++++|+++
T Consensus 141 hG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~aavi~ep~~~~~G~~~~~~~~l~~ 220 (423)
T TIGR00713 141 HGHHDALLVKAGSGAATLGLPTSPGVPEDFAKLTLVLPYNDLEALEEVFEEYGEEIAGVIVEPVAGNMGVVPPKPEFLAG 220 (423)
T ss_pred CCChhhhhccccCcccccCCCCCCCCCcccccceEEeCCCCHHHHHHHHHHcCCcEEEEEEeCCCCCCCCcCCCHHHHHH
Confidence 9998776664432 2122122221 23456788899999999996 2579999999999999988888999999
Q ss_pred HHHHHHHhCCEEEEeccccCCCcccccccccccCCCcceeeecccccCCcccccccccHHHHhhccC---CCccCCCCCc
Q 013008 272 LRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINY---GDHGSTFAGS 348 (451)
Q Consensus 272 l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~t~sK~lg~G~~iG~v~~~~~i~~~~~~---~~~~~t~~~~ 348 (451)
|+++|++||++||+||||+|| |+|.+++++++++.||++||||++++|+|+|++++++++++.+.. ..+.+||++|
T Consensus 221 l~~l~~~~~~llI~DEv~~g~-r~g~~~~~~~~~~~pDi~t~sK~l~~G~pig~v~~~~~i~~~~~~~~~~~~~~T~~~~ 299 (423)
T TIGR00713 221 LRALTEEYGSLLIFDEVMTGF-RVALGGAQEYFGVEPDLTTLGKIIGGGLPVGAFGGRREIMERLAPEGPVYQAGTLSGN 299 (423)
T ss_pred HHHHHHHhCCEEEEEcccccc-ccCcchhHHHhCCCcchhhhhhhhcCCCceeeeeEHHHHHHhhCcCCCeeeccCCCCC
Confidence 999999999999999999999 888877788889999999999999999999999999999998863 2467899999
Q ss_pred HHHHHHHHHHHHHhcChHHHHH--------------HHhCCCCcceecccceeEEEEecCC---------------hHHH
Q 013008 349 PLVCNAAIAVLDKISNPAFLAS--------------KLARNPHVKDVRGLGLIIGIEFDVS---------------ATPV 399 (451)
Q Consensus 349 ~~~~aaa~aal~~~~~~~~~~~--------------~~~~~~~~~~v~g~G~~~~~~~~~~---------------~~~~ 399 (451)
|++|++++++|+.++++++.++ ++++++.+..+++.|+++++++..+ ...+
T Consensus 300 ~~~~aaa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 379 (423)
T TIGR00713 300 PLAMAAGLATLKLLDEEGVYTELDELAKRLAEGLSEVLEDTGIPHTVNRVGSMFSLFFTEEEVTNYADAKKSDTELFAKF 379 (423)
T ss_pred HHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEeeccEEEEEEecCCCCChhhhhcccHHHHHHH
Confidence 9999999999999877655544 2344566666789999999887311 2257
Q ss_pred HHHHHHCCceeeecCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 013008 400 VDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTLPVL 446 (451)
Q Consensus 400 ~~~l~~~Gv~~~~~~~~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~ 446 (451)
++.|+++||++.+.+. +.+|++|+ +|+++|++++++|+++++++
T Consensus 380 ~~~l~~~Gv~v~~~~~-~~~~l~~~--~t~~~i~~~~~~l~~~l~~~ 423 (423)
T TIGR00713 380 FHEMLDKGVFLPPSQF-EACFLSAA--HTEEDIENTIEAAEEVFAEL 423 (423)
T ss_pred HHHHHHCCeEEecCCc-cceeeECC--CCHHHHHHHHHHHHHHHhhC
Confidence 8889999999877654 56788765 79999999999999998753
No 70
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=7.9e-59 Score=463.93 Aligned_cols=356 Identities=46% Similarity=0.768 Sum_probs=312.0
Q ss_pred CCCCceEEEeecccEEEecCCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHhhccCCC
Q 013008 77 YNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFAD 156 (451)
Q Consensus 77 ~~~~p~~~~~~~G~~l~d~~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~e 156 (451)
+.+.|+.+++++|.++||.||++||||.+|+++.+|||+||+|++|+.+++++..+.+..+.++...+|++++.+..+.+
T Consensus 8 ~~~~~~~~~~~~G~~~~d~~G~~~lD~~s~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~ 87 (377)
T PRK02936 8 YGRFPIDIVKGKGTKVTDNNGKTYLDFTSGIAVCNLGHCHPTVTKAVQEQLDDIWHVSNLFTNSLQEEVASLLAENSAGD 87 (377)
T ss_pred ccCCCceEEEeecCEEEeCCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHhcCCCC
Confidence 34678999999999999999999999999999999999999999999999988644444455677889999999887778
Q ss_pred eEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHH
Q 013008 157 RVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIE 236 (451)
Q Consensus 157 ~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 236 (451)
+++|++||++|++.|+++++.++ ++++||+++++|||++..++.+++...+...+.+..+++..++++|++
T Consensus 88 ~~~~~~sG~~a~~~A~~~a~~~~---------g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 158 (377)
T PRK02936 88 LVFFCNSGAEANEAALKLARKHT---------GKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFTHVPFNDIK 158 (377)
T ss_pred EEEEeCCcHHHHHHHHHHHHHhc---------CCCeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCceEeCCCCHH
Confidence 99999999999999999998875 377899999999999999988877655555566777788889999999
Q ss_pred HHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccccccCCCcceeeeccc
Q 013008 237 ATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKP 316 (451)
Q Consensus 237 ~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~t~sK~ 316 (451)
++++.+.+ ++++|++||+++++|..+++++|+++|+++|++||+++|+||||+|||++|.+++++++++.||+++|||+
T Consensus 159 ~l~~~~~~-~~~~ii~e~i~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~~~~~~~~~~di~t~sK~ 237 (377)
T PRK02936 159 ALKEVMNE-EVAAVMLEVVQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTGTLFAYEQFGLDPDIVTVAKG 237 (377)
T ss_pred HHHHhccC-CeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhHHHhhCCCCcEEEEccc
Confidence 99999964 68999999999999998899999999999999999999999999999999987777788999999999999
Q ss_pred ccCCcccccccccHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH-----------H---HhCCCCcceec
Q 013008 317 LAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS-----------K---LARNPHVKDVR 382 (451)
Q Consensus 317 lg~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~-----------~---~~~~~~~~~v~ 382 (451)
+++|+|+|++++++++++.+....+.+|+++||++|+|+.++|+.+..++++++ + ..+++.+..++
T Consensus 238 l~~G~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~ 317 (377)
T PRK02936 238 LGNGIPVGAMIGKKELGTAFGPGSHGSTFGGNPLAMAAAKEVLQVIKQPSFLEEVQEKGEYFLQKLQEELEHLECVKNIR 317 (377)
T ss_pred ccCCCccEEEEEcHHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhCCcEEeEe
Confidence 999999999999999999997666778999999999999999998755444444 2 22356666678
Q ss_pred ccceeEEEEecCChHHHHHHHHHCCceeeecCCCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 013008 383 GLGLIIGIEFDVSATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTL 443 (451)
Q Consensus 383 g~G~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~iri~~~~~~t~e~i~~~l~~l~~~l 443 (451)
+.|+++++++......+.+.|.++||++.|.+. +.+||+|++.++++++++++++|++++
T Consensus 318 ~~g~~~~i~~~~~~~~~~~~l~~~gv~v~~~g~-~~lRi~p~~~~~~~~i~~~i~~l~~~~ 377 (377)
T PRK02936 318 GKGLMIGIECTEEVAPVIEQLREEGLLVLSAGP-NVIRLLPPLVVTKEELDQAVYLLKKVL 377 (377)
T ss_pred ecceEEEEEecchHHHHHHHHHHCCeEEecCCC-CEEEEECCcccCHHHHHHHHHHHHHhC
Confidence 899999999865577889999999999998765 789999999999999999999998764
No 71
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=100.00 E-value=6e-59 Score=492.01 Aligned_cols=378 Identities=27% Similarity=0.373 Sum_probs=307.6
Q ss_pred HHHHHHHhcccccCCC-------CceEEEeeccc----EEEecCCC----EEEeeccCcccccCC-CCCHHHHHHHHHHH
Q 013008 64 EVMEAEKKLLVGTYNR-------APVVLASGKGC----KLYDAEGR----EYLDLSSGIAVNALG-HGDADWIKAVVDQA 127 (451)
Q Consensus 64 ~~~~~~~~~~~~~~~~-------~p~~~~~~~G~----~l~d~~G~----~~iD~~~~~~~~~lG-~~~p~v~~a~~~~~ 127 (451)
++.++..++.+++|.. .|.++++++|. |++|.+|+ +|||+++++++.++| |+||+|.+|+.+|+
T Consensus 316 ~~~~~a~~~iw~Pftq~~~~~~~~~~vi~~a~G~~~~~~~~d~~G~~~~~~ylD~~sg~w~~~lG~h~~p~I~~Ai~~Qa 395 (817)
T PLN02974 316 SMPKEAGEVLWWPFTQHALVPRDSVTVIDSRCGEDFSVYKPKTNSTCSIVQQFDACASWWTQGPDPTLQPELARAVAYAA 395 (817)
T ss_pred HHHHHHhhhccCCcccccccCCCCceEEEeeecCceeEEEECCCCCcccceEEEcchhHHHhCCCcCCCHHHHHHHHHHH
Confidence 3344455666665543 36788999998 99999998 999999999999999 58999999999999
Q ss_pred hhcccccC-CCCCHHHHHHHHHHhhccC---CCeEEecCCHHHHHHHHHHHHH-HHhhhcCCCCC---------CCCceE
Q 013008 128 NVLTHVSN-MYYSIPQIELAKRLVACSF---ADRVFFSNTGTEANEAAIKFAR-KFQRHSNPDSK---------EPATEF 193 (451)
Q Consensus 128 ~~~~~~~~-~~~~~~~~~l~~~l~~~~~---~e~v~~~~sG~eA~~~al~~a~-~~~~~~~~~~~---------~~~~~i 193 (451)
+++.|..+ .+.+++..+|+++|.+..+ .++|+|++||+||++.|||+|+ .|+...+.+.. .+|.+|
T Consensus 396 ~rl~hv~~~~~~hepa~~LAe~L~~~~~~~~l~rVffs~sGSeAvE~AlKmA~r~y~~~~G~~~~~~~~~~~~~~~r~kI 475 (817)
T PLN02974 396 GRYGHVMFPENVHEPALRAAELLLGGPGKGWASRVFFSDNGSTAIEVALKMAFRKFIVDHGFLENSGNEKRGGDLIELKV 475 (817)
T ss_pred hhCCccccCccCCHHHHHHHHHHHhccCCCCCCEEEECCchHHHHHHHHHHHHHHHHHhcCCCcccccccccccCCCCEE
Confidence 99887654 3567889999999999664 4799999999999999999996 47654432100 137789
Q ss_pred EEEcCCccCChhhhhhccCCCCcCCCC-cCC-C--------CCe------e--EeeCC--C-------------------
Q 013008 194 VSFTNSFHGRTMGALALTSKEHYRSPF-EPV-M--------PGV------N--FVEYG--N------------------- 234 (451)
Q Consensus 194 i~~~~~yhg~~~~~~~~~~~~~~~~~~-~~~-~--------~~~------~--~~~~~--d------------------- 234 (451)
|.+.++|||.+.+++++++...++..+ .+. . |.+ . .+|++ +
T Consensus 476 Ia~~gsYHG~T~GAms~sg~~~~~~~~~~p~~~~~~~~~~~P~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~f~~~ 555 (817)
T PLN02974 476 LALDGSYHGDTLGAMEAQAPSVFTGFLQQPWYSGRGLFLDPPTVGMRNGRWNISLPEGFSSGLEGEETTWESRDEVFDKT 555 (817)
T ss_pred EEECCCcCCCCHHHHhhCCchhhhcccccccccCCCcccCCCccccccccccccCCcccccccccccccccccccccccc
Confidence 999999999999999998754333222 110 0 110 0 01111 0
Q ss_pred ----------HHHHHHhcC-------CCCeEEEEEccc-cCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCccc
Q 013008 235 ----------IEATRKLIQ-------PGKTAAVFVEPI-QGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTG 296 (451)
Q Consensus 235 ----------~~~le~~l~-------~~~~aavi~ep~-~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G 296 (451)
.+.+++.|+ .+++++||+||+ +|.+|+++++++|+++|+++|++||++||+|||+|||||+|
T Consensus 556 r~~~~~~~~~~~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~DEV~TGfGRtG 635 (817)
T PLN02974 556 RDSTPLAKAYRSYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVFTGLWRLG 635 (817)
T ss_pred ccchhhhHHHHHHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeecccCCCccc
Confidence 245666664 357999999995 89999999999999999999999999999999999999999
Q ss_pred ccccccccCCCcceeeecccccCC-cccccccccHHHHhhccC------CCccCCCCCcHHHHHHHHHHHHHhcChH---
Q 013008 297 YLWAHEHYGIFPDIMTLAKPLAGG-LPIGAALVTEKVASAINY------GDHGSTFAGSPLVCNAAIAVLDKISNPA--- 366 (451)
Q Consensus 297 ~~~~~~~~~~~pdi~t~sK~lg~G-~~iG~v~~~~~i~~~~~~------~~~~~t~~~~~~~~aaa~aal~~~~~~~--- 366 (451)
++|+++++|+.|||+|+||+|+|| +|+|++++++++++.+.. ..|++||++||++|+|++++|+++++++
T Consensus 636 ~~fa~e~~gv~PDIi~~gKgLtgG~~Plaa~l~~~~I~~~f~~~~~~~~~~hg~Ty~gnpl~cAaala~L~~~~~~~~~~ 715 (817)
T PLN02974 636 VESAWELLGCKPDIACYAKLLTGGLVPLAATLATEEVFEAFRGPSKLDALLHGHSYTAHPMGCAAAAKALQWYKDPSTNP 715 (817)
T ss_pred chhhHHhcCCCCCEEeecccccCCCCccEEEEEcHHHHHhhccccccCCcccCCCCCcCHHHHHHHHHHHHHHHcccHHH
Confidence 999999999999999999999999 699999999999998852 2488999999999999999999998763
Q ss_pred -HHHH-----------H---HhCCCCcceecccceeEEEEecCC----------hHHHHHHHH-HCCceeeecCCCCEEE
Q 013008 367 -FLAS-----------K---LARNPHVKDVRGLGLIIGIEFDVS----------ATPVVDACR-DSGLLVLTAGKGNVVR 420 (451)
Q Consensus 367 -~~~~-----------~---~~~~~~~~~v~g~G~~~~~~~~~~----------~~~~~~~l~-~~Gv~~~~~~~~~~ir 420 (451)
+.++ + ++++|.+.++|+.|+|+++++..+ +..+.+.|+ ++|+++.+.+ ++++
T Consensus 716 ~l~~~~~~l~~~l~~~l~~~l~~~p~V~~VRg~Gl~~~iel~~~~~~~~~~~~~a~~v~~~~~~~~Gl~~r~~G--nvi~ 793 (817)
T PLN02974 716 NLIPPGSRLRELWDEELVRAISSLPNVERVVSLGTVLALELDAEGSGSGYSSLYARSVVRRLRREDGIYARPLG--NVVY 793 (817)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCeeEEEeeeeEEEEEEecCCcccccchHHHHHHHHHHHHhCCEEEEecC--CEEE
Confidence 2222 2 245788999999999999999321 246788888 9999999864 7899
Q ss_pred EeCCCCCCHHHHHHHHHHHHHHH
Q 013008 421 LVPPLIISEQELDQAVEILCKTL 443 (451)
Q Consensus 421 i~~~~~~t~e~i~~~l~~l~~~l 443 (451)
+.||+.+++|++++++++|.+.|
T Consensus 794 l~pP~~i~~e~l~~~~~~l~~~~ 816 (817)
T PLN02974 794 LMCGPTTSPETCTRLLRKVYRRL 816 (817)
T ss_pred EeCCCCCCHHHHHHHHHHHHHHh
Confidence 99999999999999999999876
No 72
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=2.5e-58 Score=463.51 Aligned_cols=364 Identities=47% Similarity=0.761 Sum_probs=316.9
Q ss_pred cccccCCCCceEEEeecccEEEecCCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHhh
Q 013008 72 LLVGTYNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVA 151 (451)
Q Consensus 72 ~~~~~~~~~p~~~~~~~G~~l~d~~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 151 (451)
+....|...|+++.+++|.++||.||++||||.+++++++|||+||+|.+++.+++++..+.+..+.+....+|+++|++
T Consensus 17 ~~~~~~~~~~~~~~~~~G~~~~d~dg~~~lD~~s~~~~~~lG~~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~la~~l~~ 96 (398)
T PRK03244 17 VMMNNYGTPPLALVRGEGAVVWDVDGKEYLDLLGGIAVNALGHAHPAVVEAVTRQLATLGHVSNLFATEPQIALAERLVE 96 (398)
T ss_pred HhhhhccCCCceEEEeeecEEEECCCCEEEECCcCHhhccCCCCCHHHHHHHHHHHHhccCccCccCCHHHHHHHHHHHH
Confidence 34444556789999999999999999999999999999999999999999999999986554445666778899999999
Q ss_pred ccC---CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCee
Q 013008 152 CSF---ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVN 228 (451)
Q Consensus 152 ~~~---~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (451)
.++ .++++|++||+||++.|+++++.+ ++++||.++++|||++..++.+++.......+.+..+++.
T Consensus 97 ~~~~~~~~~v~~~~sgsea~~~al~~~~~~----------g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (398)
T PRK03244 97 LLGAPEGGRVFFCNSGAEANEAAFKLARLT----------GRTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVE 166 (398)
T ss_pred hCCCCCCCEEEEeCchHHHHHHHHHHHHHH----------CCCeEEEECCCcCCccHHHHhccCCcccccCCCCCCCCce
Confidence 876 369999999999999999998863 3678999999999999998888765544445556666788
Q ss_pred EeeCCCHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccccccCCCc
Q 013008 229 FVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFP 308 (451)
Q Consensus 229 ~~~~~d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~p 308 (451)
.+|++|++++++++. +++++|++||+++++|.++++++|+++|+++|++||++||+||+|+||||+|.+++++++++.|
T Consensus 167 ~~~~~d~~~l~~~~~-~~~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~~p 245 (398)
T PRK03244 167 HVPYGDVDALAAAVD-DDTAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTGAWFAHQHDGVTP 245 (398)
T ss_pred EeCCCCHHHHHHhhc-CCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCcccchHHhhhhhCCCC
Confidence 889999999999985 4799999999999999999999999999999999999999999999999999887888889999
Q ss_pred ceeeecccccCCcccccccccHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH----------HHhC--CC
Q 013008 309 DIMTLAKPLAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS----------KLAR--NP 376 (451)
Q Consensus 309 di~t~sK~lg~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~----------~~~~--~~ 376 (451)
|++||||++++|+|+|++++++++++.+....+.+||++||++|+++.++|+.++++++.++ .++. +|
T Consensus 246 Di~t~sK~l~~G~~ig~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 325 (398)
T PRK03244 246 DVVTLAKGLGGGLPIGACLAFGPAADLLTPGLHGSTFGGNPVACAAALAVLDTIASEGLLENAERLGEQLRAGIEALGHP 325 (398)
T ss_pred CEEEEchhhhCCcccEEEEEcHHHHhhccCCCCcCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999999999999987667888999999999999999998876665555 2222 45
Q ss_pred CcceecccceeEEEEec-CChHHHHHHHHHCCceeeecCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHh
Q 013008 377 HVKDVRGLGLIIGIEFD-VSATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTLPVLD 447 (451)
Q Consensus 377 ~~~~v~g~G~~~~~~~~-~~~~~~~~~l~~~Gv~~~~~~~~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~~ 447 (451)
.+..+++.|++++++++ ..+..+.+.|+++||++.+.+. +.+|++|++.++++||++++++|++++.+++
T Consensus 326 ~~~~v~g~g~~~~i~~~~~~~~~~~~~l~~~Gv~~~~~~~-~~iR~~p~~~~t~~~i~~~~~~l~~~l~~~~ 396 (398)
T PRK03244 326 LVDHVRGRGLLLGIVLTAPVAKAVEAAAREAGFLVNAVAP-DVIRLAPPLIITDAQVDAFVAALPAILDAAA 396 (398)
T ss_pred ceeeEeeccEEEEEEEeccHHHHHHHHHHHCCeEEeecCC-CEEEEECCCcCCHHHHHHHHHHHHHHHHhcc
Confidence 55678899999999984 3466799999999999988654 8899999999999999999999999998765
No 73
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=100.00 E-value=5.3e-58 Score=461.15 Aligned_cols=378 Identities=36% Similarity=0.604 Sum_probs=320.9
Q ss_pred HHHHHHHhcccccCCCCceEEEeecccEEEecCCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHH
Q 013008 64 EVMEAEKKLLVGTYNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQI 143 (451)
Q Consensus 64 ~~~~~~~~~~~~~~~~~p~~~~~~~G~~l~d~~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~ 143 (451)
.+.++..++....+.+.|+++.+++|+++||.||++||||.+++++.++||+||+|.+|+.++++++.+.+..+.++.+.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~lD~~s~~~~~~~Gh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~ 82 (401)
T TIGR01885 3 EAIERENKYGAHNYHPLPVVFSKAEGVHVWDVEGKRYLDFLSAYSAVNQGHCHPKIVKALTEQAQKLTLSSRAFYNDVFG 82 (401)
T ss_pred hHHHHHHHhhhcccCCCCceEEeeecCEEEeCCCCEEEEcccCHhhccCCCCCHHHHHHHHHHHHhccccccccCCHHHH
Confidence 34455555555566677899999999999999999999999999999999999999999999998876654444677799
Q ss_pred HHHHHHhhccCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCC
Q 013008 144 ELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPV 223 (451)
Q Consensus 144 ~l~~~l~~~~~~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~ 223 (451)
+|+++|++.++.++++|++||++||+.|+++++.++....+. ..++++|+.++.+|||++.+++++++.......+.+.
T Consensus 83 ~l~~~l~~~~~~~~~~~~~SGs~A~e~ai~~a~~~~~~~~~~-~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~~~~ 161 (401)
T TIGR01885 83 EFAEYVTKLFGYDKVLPMNTGAEAVETAIKLARKWGYKVKGI-PENQAIIVSAKGNFHGRTLGAISMSTDPDSRTNFGPY 161 (401)
T ss_pred HHHHHHHhhcCCCEEEEeCccHHHHHHHHHHHHHHhhhhcCC-CCCCCEEEEECCCcCcccHHHHhCcCCcccccccCCC
Confidence 999999999998999999999999999999999886322100 0147789999999999999999888765444445555
Q ss_pred CCCeeEeeCCCHHHHHHhcC--CCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccc
Q 013008 224 MPGVNFVEYGNIEATRKLIQ--PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAH 301 (451)
Q Consensus 224 ~~~~~~~~~~d~~~le~~l~--~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~ 301 (451)
.+++..++++|+++|+++++ .+++++|++||+++++|.+.++++||++|+++|++||+++|+||||+|||++|.+++.
T Consensus 162 ~~~~~~~~~~d~~~le~~l~~~~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~g~~G~~~~~ 241 (401)
T TIGR01885 162 VPGFKKIPYNNLEALEEALEDHGPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTGLGRTGKLLCV 241 (401)
T ss_pred CCCceEeCCCCHHHHHHHHHhcCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhhHH
Confidence 56778899999999999986 3578999999999999999999999999999999999999999999999999988777
Q ss_pred cccCCCcceeeecccccCC-cccccccccHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH----------
Q 013008 302 EHYGIFPDIMTLAKPLAGG-LPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS---------- 370 (451)
Q Consensus 302 ~~~~~~pdi~t~sK~lg~G-~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~---------- 370 (451)
+++++.||++++||++++| +|+|++++++++++.+....+..|++++|++++++.++|+.++++++.++
T Consensus 242 ~~~~~~~di~~~gK~l~~g~~~ig~v~~~~~i~~~~~~~~~~~t~~~~p~~~~aa~a~L~~i~~~~l~~~~~~~~~~~~~ 321 (401)
T TIGR01885 242 DHENVKPDIVLLGKALSGGVYPVSAVLADDDVMLTIKPGEHGSTYGGNPLACAVAVAALEVLEEEKLAENAEKLGEIFRD 321 (401)
T ss_pred hhcCCCCCEEEeeccccCCCCCcEEEEEcHHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 7789999999999999976 89999999999999887656778999999999999999999876555444
Q ss_pred HHhCC--CCcceecccceeEEEEecC-----ChHHHHHHHHHCCceeeecCCCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 013008 371 KLARN--PHVKDVRGLGLIIGIEFDV-----SATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTL 443 (451)
Q Consensus 371 ~~~~~--~~~~~v~g~G~~~~~~~~~-----~~~~~~~~l~~~Gv~~~~~~~~~~iri~~~~~~t~e~i~~~l~~l~~~l 443 (451)
.++.+ +.+..+++.|+++.+.++. .+.++++.|.++||++.|.+. +.+||.|++.+++++|++++++|++++
T Consensus 322 ~L~~l~~~~~~~~~g~g~~~~i~~~~~~~~~~~~~l~~~l~~~Gv~v~~~~~-~~lRi~p~l~~t~~~i~~~l~~l~~~l 400 (401)
T TIGR01885 322 QLKKLPKPIITEVRGRGLLNAIVIDESKTGRTAWDLCLKLKEKGLLAKPTHG-NIIRLAPPLVITEEQLDEGLEIIKKVI 400 (401)
T ss_pred HHHhccCCceeEEeecCeeEEEEeccCcchhHHHHHHHHHHhCCEEEEecCC-CEEEEeCCccCCHHHHHHHHHHHHHHh
Confidence 22333 4556678999999988842 356799999999999988765 789999999999999999999999876
No 74
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=100.00 E-value=2.7e-58 Score=465.04 Aligned_cols=381 Identities=26% Similarity=0.418 Sum_probs=318.1
Q ss_pred ccccccchhhhccCCCCCCcchHHHHHHHHhcccccCCCCceEEEeecccEEEecCCCEEEeeccCcccccCCCCCHHHH
Q 013008 41 ASVNVEVNDAARGSAGGLGRNNKEVMEAEKKLLVGTYNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWI 120 (451)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~G~~l~d~~G~~~iD~~~~~~~~~lG~~~p~v~ 120 (451)
+|.+| ++.|++.+|||...+...+ .++.+.|+++++++|.++||.||++||||.+++++.+|||+||+|.
T Consensus 3 ~~~~~-~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~a~G~~l~d~dG~~~lD~~~g~~~~~lGh~~p~i~ 72 (426)
T PRK00062 3 KSEEL-FERAKKLIPGGVNSPVRAF---------KSVGGTPRFIERAKGAYLYDVDGNEYIDYVGSWGPMILGHAHPEVV 72 (426)
T ss_pred hhHHH-HHHHHHhCCCCcCCccccc---------CCCCCCCeEEEeCcCCEEEeCCCCEEEEcccchhhhhcCCCCHHHH
Confidence 57788 9999999999976554432 3344568999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcccccCCCCCHHHHHHHHHHhhccC-CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCC
Q 013008 121 KAVVDQANVLTHVSNMYYSIPQIELAKRLVACSF-ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNS 199 (451)
Q Consensus 121 ~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~ 199 (451)
+++.+++++... ..+.++...+|+++|++..+ .++|+|++||+||++.|+++++.+++ +++||.++++
T Consensus 73 ~a~~~~~~~~~~--~~~~~~~~~~la~~L~~~~~~~~~v~~~~sGseA~e~Aik~a~~~~g---------~~~ii~~~~~ 141 (426)
T PRK00062 73 EAVIEAAEKGLS--FGAPTELEVELAELVIELVPSIEMVRMVNSGTEATMSAIRLARGYTG---------RDKIIKFEGC 141 (426)
T ss_pred HHHHHHHHhCCc--CCCCCHHHHHHHHHHHHhCCCCCEEEEecCHHHHHHHHHHHHHHHhC---------CCeEEEEcCc
Confidence 999999988432 33456778899999999874 78999999999999999999998864 7899999999
Q ss_pred ccCChhhhhhccCCCC--cCCCCcC-----CCCCeeEeeCCCHHHHHHhcC--CCCeEEEEEccccCCCCccccCHHHHH
Q 013008 200 FHGRTMGALALTSKEH--YRSPFEP-----VMPGVNFVEYGNIEATRKLIQ--PGKTAAVFVEPIQGEGGIYSATKEFLQ 270 (451)
Q Consensus 200 yhg~~~~~~~~~~~~~--~~~~~~~-----~~~~~~~~~~~d~~~le~~l~--~~~~aavi~ep~~~~~G~~~~~~~~l~ 270 (451)
|||++.++...++... ....+.+ ..++...++++|++++++.++ .+++++||+||+++++|.++++++||+
T Consensus 142 yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~aaiivEpv~~~~G~~~~~~~~l~ 221 (426)
T PRK00062 142 YHGHADSLLVKAGSGAATLGLPDSPGVPEDFAKHTLTAPYNDLEAVEELFEEYGDEIAAVIVEPVAGNMGVVPPKPGFLE 221 (426)
T ss_pred cCCchhhhhhccCccccccCCCCCCCCCcccccceEEcCCCCHHHHHHHHHhCCCcEEEEEEeCCcCCCCCcCCCHHHHH
Confidence 9999977766543211 1111111 113456678899999999885 358999999999999999999999999
Q ss_pred HHHHHHHHhCCEEEEeccccCCCcccccccccccCCCcceeeecccccCCcccccccccHHHHhhccC---CCccCCCCC
Q 013008 271 FLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINY---GDHGSTFAG 347 (451)
Q Consensus 271 ~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~t~sK~lg~G~~iG~v~~~~~i~~~~~~---~~~~~t~~~ 347 (451)
+|+++|++||+++|+||||+|| |+|.+++.+++++.||++++||++++|+|+|++++++++++.+.. ..+.+|+++
T Consensus 222 ~l~~l~~~~~~llI~DEv~~G~-r~g~~~~~~~~~~~pDi~~~gK~l~~G~p~ga~~~~~~i~~~~~~~~~~~~~~T~~~ 300 (426)
T PRK00062 222 GLRELCDEHGALLIFDEVMTGF-RVALGGAQGYYGVTPDLTTLGKIIGGGLPVGAFGGRREIMEQLAPLGPVYQAGTLSG 300 (426)
T ss_pred HHHHHHHHcCCEEEEeechhcc-ccCCccHHHHhCCCcchHhhhhHhhCCCcceeeeEHHHHHHhhccCCCceecccCcC
Confidence 9999999999999999999999 888888888899999999999999999999999999999998853 246678999
Q ss_pred cHHHHHHHHHHHHHhcChHHHHH--------------HHhCCCCcceecccceeEEEEecCC---------------hHH
Q 013008 348 SPLVCNAAIAVLDKISNPAFLAS--------------KLARNPHVKDVRGLGLIIGIEFDVS---------------ATP 398 (451)
Q Consensus 348 ~~~~~aaa~aal~~~~~~~~~~~--------------~~~~~~~~~~v~g~G~~~~~~~~~~---------------~~~ 398 (451)
||++|++++++|+.++++++.++ +.++++.+..+++.|+|+.+++..+ +..
T Consensus 301 ~p~~~aaa~a~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~vrg~G~~~~i~l~~~~~~~~~~~~~~~~~~~~~ 380 (426)
T PRK00062 301 NPLAMAAGLATLKLLKEPGFYEELEALTKRLAEGLKEAAKKAGIPLTVNRVGSMFGLFFTDEPVTNYADAKKSDTERFAR 380 (426)
T ss_pred CHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecceEEEEEecCCCcchhhhccccHHHHHH
Confidence 99999999999999987666555 2234676777899999999998421 257
Q ss_pred HHHHHHHCCceeeecCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 013008 399 VVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTLPVL 446 (451)
Q Consensus 399 ~~~~l~~~Gv~~~~~~~~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~ 446 (451)
+...|+++||++.+.+. +.+++ ++++|++||++++++|+++++++
T Consensus 381 i~~~l~~~Gv~v~~~~~-~~~~~--~~~~t~~ei~~~~~~l~~~l~~~ 425 (426)
T PRK00062 381 FFHAMLDEGVYLAPSQF-EAGFV--SAAHTDEDIEKTLEAARKAFAAL 425 (426)
T ss_pred HHHHHHHCCeEeecCCc-Cceee--eccCCHHHHHHHHHHHHHHHHhh
Confidence 88899999999988764 45665 68999999999999999999764
No 75
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=100.00 E-value=2.9e-59 Score=457.68 Aligned_cols=308 Identities=45% Similarity=0.758 Sum_probs=270.3
Q ss_pred EEEeecccEEEecCCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhccccc-CCCCCHHHHHHHHHHhhcc--CCCeEE
Q 013008 83 VLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVS-NMYYSIPQIELAKRLVACS--FADRVF 159 (451)
Q Consensus 83 ~~~~~~G~~l~d~~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~-~~~~~~~~~~l~~~l~~~~--~~e~v~ 159 (451)
++++++|+|+||.||++||||++++++.+|||+||+|.+++.+++++..+.. ..+.++...+|+++|.+.. +.++++
T Consensus 1 ~i~~a~G~~l~d~dG~~~lD~~~~~~~~~lGh~~p~i~~ai~~~~~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~~v~ 80 (339)
T PF00202_consen 1 FIERAEGAYLWDVDGREYLDFMSGYGSVNLGHNHPEIAEAIAEQANKLNYVSFSGFTHPEAAELAEKLAELFPGGLDRVF 80 (339)
T ss_dssp EEEEEEBTEEEETTSEEEEESSHHHHTTTT-BT-HHHHHHHHHHHHHCSSCSTTTSEEHHHHHHHHHHHHHSSTTEEEEE
T ss_pred CeEEeecCEEEECCCCEEEECCCCccceecCCCccccchhHHHHhhhcccccccceeccchhhhhhhhhhccccccceee
Confidence 5789999999999999999999999999999999999999999999876654 4456777999999999999 488999
Q ss_pred ecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHH--
Q 013008 160 FSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEA-- 237 (451)
Q Consensus 160 ~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-- 237 (451)
|++||+||++.|+|+++.+...+..+ +|.+||.++++|||++.+++++++.+.++..+.+..+++..+|++|+..
T Consensus 81 f~~sGseAve~Alkla~~~~~~~~~~---~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 157 (339)
T PF00202_consen 81 FANSGSEAVEAALKLARQYHNKRAYT---GRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFPDPAADE 157 (339)
T ss_dssp EESSHHHHHHHHHHHHHHHHHHTHHH---TTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETTCHHHHH
T ss_pred eccCchHHHHHHHHHhhccccccccc---CCceEEEeeeeeeccCcccccccCCccccccccccccccccccCCccchhh
Confidence 99999999999999999443322211 4889999999999999999999888777777888888889999998766
Q ss_pred --------HHHhcC---CCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccccccCC
Q 013008 238 --------TRKLIQ---PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGI 306 (451)
Q Consensus 238 --------le~~l~---~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~ 306 (451)
+++.+. .+++++||+||+++++|.++++++||++|+++|++||++||+|||+|||||+|++|+++++++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG~~~a~~~~gv 237 (339)
T PF00202_consen 158 EEQACLNALEELIAALNADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTGKFFASEHYGV 237 (339)
T ss_dssp HHHHHHHHHHHHHHHHHGGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTSSSSGHHHHTS
T ss_pred hHHHHHHHHHHHHHhhcCCcEEEEEEeccccccCccccccchhhehcccccccccceecccccccccccCCccceecccc
Confidence 333332 568999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcceeeecccccCCcccccccccHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH--------------HH
Q 013008 307 FPDIMTLAKPLAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS--------------KL 372 (451)
Q Consensus 307 ~pdi~t~sK~lg~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~--------------~~ 372 (451)
.||++|+||++++|+|+|++++++++++.+.+..+++||++||++|++++++|+.++++++.++ +.
T Consensus 238 ~PDiv~~gK~l~gG~p~sav~~~~~i~~~~~~~~~~~T~~g~p~~~aaa~~~l~~~~~~~~~~~~~~~g~~l~~~L~~l~ 317 (339)
T PF00202_consen 238 DPDIVTFGKGLGGGLPISAVLGSEEIMEAFQPGSHGSTFGGNPLSCAAALATLEILEEEDLLERVRELGERLREGLRELA 317 (339)
T ss_dssp SSSEEEEEGGGGTTSSEEEEEEEHHHHTTSCTTSSTCTTTT-HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH
T ss_pred cCcccccccchhhhhhcccccccchhhccccccccccccccchHhhhhhhhHHHhhccHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999998878999999999999999999999988877666 45
Q ss_pred hCCCCcceecccceeEEEEec
Q 013008 373 ARNPHVKDVRGLGLIIGIEFD 393 (451)
Q Consensus 373 ~~~~~~~~v~g~G~~~~~~~~ 393 (451)
++++.+..++|.|+|+++++.
T Consensus 318 ~~~~~i~~vrg~Gl~~~ie~~ 338 (339)
T PF00202_consen 318 ARYPLIGEVRGIGLMIGIELV 338 (339)
T ss_dssp HHTTTEEEEEEETTEEEEEES
T ss_pred HhCCCeEEEeeeCeEEEEEEE
Confidence 667889999999999999873
No 76
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=100.00 E-value=3.1e-58 Score=464.25 Aligned_cols=369 Identities=27% Similarity=0.428 Sum_probs=289.2
Q ss_pred HHHHhcccccCCCCceEEEeecccEEEec-CCCEEEeeccCcccccCCCCCHHHH--HHHHHHHhhccc---ccCCCCCH
Q 013008 67 EAEKKLLVGTYNRAPVVLASGKGCKLYDA-EGREYLDLSSGIAVNALGHGDADWI--KAVVDQANVLTH---VSNMYYSI 140 (451)
Q Consensus 67 ~~~~~~~~~~~~~~p~~~~~~~G~~l~d~-~G~~~iD~~~~~~~~~lG~~~p~v~--~a~~~~~~~~~~---~~~~~~~~ 140 (451)
+...++....-.|.++.+++++|+||||. ||++||||.+++++.+|||+||+|. +|+.+|+++..+ ......++
T Consensus 6 ~~~~~~~~~~~~p~~~~~~~a~G~~l~D~~dG~~ylD~~~g~~~~~lGh~~p~v~~~~ai~~q~~~~~~~~~~~~~~~~~ 85 (431)
T TIGR03251 6 EVLSRHMLTDGFDLVLDLDRSRGSVLVDARDGRRYLDMFSFFASMALGMNHPALVDDLAFRARLGAAAVNKPSNSDVYTV 85 (431)
T ss_pred HHHHHHhhccCCceeeEEEeccCCEEEECCCCCChhhcccChhhcCCCCCChhhhHHHHHHHHHHHhhhcccccCCCCCH
Confidence 33444444321234444699999999996 9999999999999999999999999 999999987632 12234566
Q ss_pred HHHHHHHHHhhcc-C--CCeEEecCCHHHHHHHHHHHHHHHhhhc----CCCCCCCCceEEEEcCCccCChhhhhhccCC
Q 013008 141 PQIELAKRLVACS-F--ADRVFFSNTGTEANEAAIKFARKFQRHS----NPDSKEPATEFVSFTNSFHGRTMGALALTSK 213 (451)
Q Consensus 141 ~~~~l~~~l~~~~-~--~e~v~~~~sG~eA~~~al~~a~~~~~~~----~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~ 213 (451)
...+++++|++.. + .++++|++||+||++.|+|+||+||+.+ +.+ .++|.+||.++++|||++.+++++++.
T Consensus 86 ~~~~l~~~l~~~~~~~~~~~v~f~~sGsEAve~AlklAr~~t~~~~~~~g~~-~~~~~~ii~~~~~yHG~t~~als~~~~ 164 (431)
T TIGR03251 86 AMARFVDTFARVLGDPALPHLFFIEGGALAVENALKTAFDWKSRHNQARGIP-AALGTQVLHLRQAFHGRSGYTLSLTNT 164 (431)
T ss_pred HHHHHHHHHHHhcCCCCcCEEEEeCCcHHHHHHHHHHHHHHhhcchhhcCCC-CCCCceEEEECCccCCcchhhhhccCC
Confidence 7889999998875 2 6899999999999999999999997531 211 012578999999999999999998775
Q ss_pred CCcCCCCcCCC-------CCe------------eEeeCCCHHHHHHhcC--CCCeEEEEEccccCCCCccccCHHHHHHH
Q 013008 214 EHYRSPFEPVM-------PGV------------NFVEYGNIEATRKLIQ--PGKTAAVFVEPIQGEGGIYSATKEFLQFL 272 (451)
Q Consensus 214 ~~~~~~~~~~~-------~~~------------~~~~~~d~~~le~~l~--~~~~aavi~ep~~~~~G~~~~~~~~l~~l 272 (451)
..+...+.|.. +.. .....++++++++.++ ++++++||+||+++++|+++++++||++|
T Consensus 165 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iAavivEPv~g~~G~~~~~~~~l~~l 244 (431)
T TIGR03251 165 DPRKTARFPKFDWPRIDNPKLTFPLDAPNLDQVIALEEEALRQARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLRAM 244 (431)
T ss_pred ccccccCCCCCCCccCCCCcccCCccccccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcCCCHHHHHHH
Confidence 43332222211 100 0001134566677775 56899999999999999999999999999
Q ss_pred HHHHHHhCCEEEEeccccCCCcccccccccccCCCcceeeecccccCCcccccccccHHH---Hhh-cc-CCCccCCCCC
Q 013008 273 RDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKV---ASA-IN-YGDHGSTFAG 347 (451)
Q Consensus 273 ~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~t~sK~lg~G~~iG~v~~~~~i---~~~-~~-~~~~~~t~~~ 347 (451)
+++|++||++||+|||+|||||+|.+|+++++++.||++++||++ ++++++..+++ ++. +. ...+.+||++
T Consensus 245 ~~lc~~~g~llI~DEV~tG~GrtG~~~a~~~~gv~PDi~~~gK~~----~~~g~~~~~~i~~~~~~~~~~~~~~~~T~~g 320 (431)
T TIGR03251 245 RALCDEHDALLIFDEVQTGVGLTGTAWAYQQLGVQPDIVAFGKKT----QVCGIMAGRRVDEVADNVFAVPSRLNSTWGG 320 (431)
T ss_pred HHHHHHcCCEEEEecchhccCccchHHHHHhcCCCCCEEEecccC----ccceEEecchHHHhhhhcccCccccCCCCCC
Confidence 999999999999999999999999999999999999999999997 44444454443 321 21 2347889999
Q ss_pred cHHHHHHHHHHHHHhcChHHHHH--------------HHhCCC-CcceecccceeEEEEecC--ChHHHHHHHHHCCcee
Q 013008 348 SPLVCNAAIAVLDKISNPAFLAS--------------KLARNP-HVKDVRGLGLIIGIEFDV--SATPVVDACRDSGLLV 410 (451)
Q Consensus 348 ~~~~~aaa~aal~~~~~~~~~~~--------------~~~~~~-~~~~v~g~G~~~~~~~~~--~~~~~~~~l~~~Gv~~ 410 (451)
||++|+|++++|+.++++++.++ +.++++ .+.++++.|+|+++++.. ....+.+.|+++||++
T Consensus 321 npl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vrg~G~~~~i~~~~~~~~~~~~~~l~~~Gvl~ 400 (431)
T TIGR03251 321 NLVDMVRATRILEIIEEERLVDNARVQGAHLLARLHELAAEFPHLVSNPRGRGLMCAFDLPSTADRDEVIRQLYREGVLL 400 (431)
T ss_pred CHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCccceecccccceeEEEEeCCHHHHHHHHHHHHhCCeEE
Confidence 99999999999999877666544 334567 778899999999999842 2456889999999999
Q ss_pred eecCCCCEEEEeCCCCCCHHHHHHHHHHHHH
Q 013008 411 LTAGKGNVVRLVPPLIISEQELDQAVEILCK 441 (451)
Q Consensus 411 ~~~~~~~~iri~~~~~~t~e~i~~~l~~l~~ 441 (451)
.+.+. +.+||+||+.+|++||++++++|++
T Consensus 401 ~~~g~-~~lr~~P~l~~t~~eid~~l~~l~~ 430 (431)
T TIGR03251 401 LGCGE-RSIRFRPPLTVTREEIDAAIDAIRR 430 (431)
T ss_pred ecCCC-CeEEEECCccCCHHHHHHHHHHHHh
Confidence 88765 7899999999999999999999976
No 77
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=6.8e-57 Score=453.11 Aligned_cols=373 Identities=52% Similarity=0.862 Sum_probs=322.1
Q ss_pred HHHhcccccCCCCceEEEeecccEEEecCCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHH
Q 013008 68 AEKKLLVGTYNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAK 147 (451)
Q Consensus 68 ~~~~~~~~~~~~~p~~~~~~~G~~l~d~~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~ 147 (451)
...++..+.|.+.|+++++++|+++||.||++||||.+++++.+|||+||+|.+++.+++++..+.+..+.++.+.+|++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~G~~~~d~dg~~~iD~~~g~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~ 88 (396)
T PRK02627 9 LEKKYLMNTYGRLPIAFVRGEGARLWDDDGKEYLDFLAGIAVNNLGHCHPKLVEAIQEQAAKLIHTSNLYYIEPQEELAE 88 (396)
T ss_pred HHHHhhcccccCCCceEEeeeeCEEEeCCCCEEEECCccHHhccCCCCCHHHHHHHHHHHhhccccccccCCHHHHHHHH
Confidence 33445556677789999999999999999999999999999999999999999999999987655444566777999999
Q ss_pred HHhhccCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCe
Q 013008 148 RLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGV 227 (451)
Q Consensus 148 ~l~~~~~~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (451)
+|++..+.+++++++||+||++.|+++++.+++..+. ++++|++++++|||++..++..++...+...+.+...++
T Consensus 89 ~l~~~~~~~~v~~~~gg~eA~~~al~~a~~~~~~~~~----~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (396)
T PRK02627 89 KLVELSGMDKVFFCNSGAEANEAAIKLARKYGHKKGI----EKPEIITAENSFHGRTLATLSATGQPKYQEGFEPLVEGF 164 (396)
T ss_pred HHHhhcCCCEEEECCCcHHHHHHHHHHHHHHhcccCC----CCCeEEEECCCcCcccHHHHHhcCCccccccCCCCCCCc
Confidence 9999988999999999999999999999988753221 237899999999999999888876655444555656677
Q ss_pred eEeeCCCHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccccccCCC
Q 013008 228 NFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIF 307 (451)
Q Consensus 228 ~~~~~~d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~ 307 (451)
..++++|++++++++. +++++|++||+++++|+.+++++++++|+++|++||++||+||+|+|||++|.+++++.+++.
T Consensus 165 ~~~~~~d~~~l~~~i~-~~~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~g~~~~~~~~~~~ 243 (396)
T PRK02627 165 IYVPFNDIEALKAAIT-DKTAAVMLEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGRTGKLFAYQHYGIE 243 (396)
T ss_pred eEeCCCCHHHHHHhcC-CCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcCCCccCceeeehhcCCC
Confidence 7889999999999995 479999999999999988899999999999999999999999999999999987777788999
Q ss_pred cceeeecccccCCcccccccccHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH--------------HHh
Q 013008 308 PDIMTLAKPLAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS--------------KLA 373 (451)
Q Consensus 308 pdi~t~sK~lg~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~--------------~~~ 373 (451)
||+++|||++++|+|+|++++++++++.+....+..|+++||++|+++.++|+.++++++.++ +..
T Consensus 244 pdi~t~sK~~~~G~rig~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 323 (396)
T PRK02627 244 PDIMTLAKGLGGGVPIGAVLAKEKVADVFTPGDHGSTFGGNPLACAAALAVIEIIEEEGLLENAAEVGEYLRAKLRELLE 323 (396)
T ss_pred CCEEEEcchhhCCcccEEEEEcHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999987666788999999999999999998766555443 223
Q ss_pred CCCCcceecccceeEEEEecCChHHHHHHHHHCCceeeecCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 013008 374 RNPHVKDVRGLGLIIGIEFDVSATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTLPVL 446 (451)
Q Consensus 374 ~~~~~~~v~g~G~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~ 446 (451)
+++.+..+++.|+++++++.....++++.|+++||++.|++. +.+|++|++.++++++++++++|+++++++
T Consensus 324 ~~~~~~~~~~~g~~~~i~~~~~~~~~~~~l~~~Gv~v~~~~~-~~lRi~~~~~~~~~~i~~~~~~l~~~l~~~ 395 (396)
T PRK02627 324 KYPGIKEVRGLGLMIGIELDRPAAEIVKKALEKGLLINVTGD-NVLRLLPPLIISKEEIDEAVDRLEEVLKEL 395 (396)
T ss_pred hCCCeeeeccCcEEEEEEecCcHHHHHHHHHHCCeEEeecCC-CEEEEECCcccCHHHHHHHHHHHHHHHHhh
Confidence 345556678889999998865678899999999999998765 789999999999999999999999998764
No 78
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=100.00 E-value=5.5e-57 Score=456.02 Aligned_cols=358 Identities=37% Similarity=0.623 Sum_probs=305.4
Q ss_pred CceEEEeecccEEEecCCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccCC-CCCHHHHHHHHHHhhccC---C
Q 013008 80 APVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNM-YYSIPQIELAKRLVACSF---A 155 (451)
Q Consensus 80 ~p~~~~~~~G~~l~d~~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~-~~~~~~~~l~~~l~~~~~---~ 155 (451)
.|+++++++|+++||+||++||||.+++++.++||+||+|.+++.++++++.+.... ..++...+|+++|++..+ .
T Consensus 23 ~p~~~~~~~G~~l~d~dG~~~lD~~~g~~~~~lGh~~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~ 102 (425)
T PRK08088 23 HPIFADRAENCRVWDVEGREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLSHTCFQVLAYEPYLELCEKMNQKVPGDFA 102 (425)
T ss_pred CCceEEeeeeCEEEeCCCCEEEEcCCchhhcCCCCCCHHHHHHHHHHHhhCCCccccccCCHHHHHHHHHHHHhCCCCCC
Confidence 489999999999999999999999999999999999999999999999987654322 346678899999999875 3
Q ss_pred CeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCC-CcCCCCcCCCCCeeEeeC--
Q 013008 156 DRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKE-HYRSPFEPVMPGVNFVEY-- 232 (451)
Q Consensus 156 e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-- 232 (451)
++++|++||+||++.|+++++.+++ +.+||.++++|||++.++.++++.. .+..++.+..+++..+++
T Consensus 103 ~~~~f~~sGsea~e~Alklar~~~~---------r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 173 (425)
T PRK08088 103 KKTLLVTTGSEAVENAVKIARAATK---------RSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPC 173 (425)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHhC---------CCeEEEECCccCCccHHHHHhhCCCCccccCCCCCCCCcEEcCCCc
Confidence 6999999999999999999999874 6789999999999999998887542 233344444444433322
Q ss_pred --CC------HHHHHHhcC----CCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCccccccc
Q 013008 233 --GN------IEATRKLIQ----PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWA 300 (451)
Q Consensus 233 --~d------~~~le~~l~----~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~ 300 (451)
++ ++.|+++++ ++++++||+||+++++|.++++++++++|+++|++||+++|+||+|+|+|++|.+++
T Consensus 174 ~~~~~~~~~~~~~l~~~l~~~~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~g~g~~g~~~~ 253 (425)
T PRK08088 174 PLHGVSEDDAIASIERIFKNDAAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQTGAGRTGTLFA 253 (425)
T ss_pred cccCccHHHHHHHHHHHHHhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchhH
Confidence 21 567888885 468999999999999999999999999999999999999999999999999998878
Q ss_pred ccccCCCcceeeecccccCCcccccccccHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH----------
Q 013008 301 HEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS---------- 370 (451)
Q Consensus 301 ~~~~~~~pdi~t~sK~lg~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~---------- 370 (451)
++.+++.||+.+|||++++|+|+||+++++++++.+....+..|+++||+.|+++.++|+.++.++++++
T Consensus 254 ~~~~~~~pdi~s~sK~l~~G~rig~v~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~ 333 (425)
T PRK08088 254 MEQMGVAADLTTFAKSIAGGFPLAGVTGRAEVMDAIAPGGLGGTYAGNPIACAAALAVLKVFEQENLLQKANALGEKLKD 333 (425)
T ss_pred HhhcCCCCCEEEEeccccCCCcceeeEecHHHHhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 8888999999999999999999999999999999998777889999999999999999998866555544
Q ss_pred ----HHhCCCCcceecccceeEEEEec--C--------ChHHHHHHHHHCCceeeecCC-CCEEEEeCCCCCCHHHHHHH
Q 013008 371 ----KLARNPHVKDVRGLGLIIGIEFD--V--------SATPVVDACRDSGLLVLTAGK-GNVVRLVPPLIISEQELDQA 435 (451)
Q Consensus 371 ----~~~~~~~~~~v~g~G~~~~~~~~--~--------~~~~~~~~l~~~Gv~~~~~~~-~~~iri~~~~~~t~e~i~~~ 435 (451)
+.+++|.+..+++.|+++|+.+. . ....+.+.|+++||++.+.+. ++.+|++|++.+++++|+++
T Consensus 334 ~l~~l~~~~~~~~~v~g~G~~~~l~l~~~~~~~~p~~~~~~~l~~~~~~~Gv~~~~~~~~~~~iRl~~~~~~t~~ei~~~ 413 (425)
T PRK08088 334 GLLAIAEKHPEIGDVRGLGAMIAIELFEDGDHSKPNAKLTAQIVARARDKGLILLSCGPYYNVLRILVPLTIEDAQIRQG 413 (425)
T ss_pred HHHHHHHhCCCeEEEeccceEEEEEEecCCCCCCCCHHHHHHHHHHHHhCCCEEecCCCCCCEEEEECCCCcCHHHHHHH
Confidence 34556777788999999999982 1 156788999999998877543 58899999999999999999
Q ss_pred HHHHHHHHHHH
Q 013008 436 VEILCKTLPVL 446 (451)
Q Consensus 436 l~~l~~~l~~~ 446 (451)
+++|.+++.++
T Consensus 414 i~~l~~~l~~~ 424 (425)
T PRK08088 414 LEIIAQCFDEA 424 (425)
T ss_pred HHHHHHHHHhh
Confidence 99999999764
No 79
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=100.00 E-value=1.3e-56 Score=451.50 Aligned_cols=375 Identities=37% Similarity=0.624 Sum_probs=316.7
Q ss_pred ccccCCCCceEEEeecccEEEecCCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHhhc
Q 013008 73 LVGTYNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVAC 152 (451)
Q Consensus 73 ~~~~~~~~p~~~~~~~G~~l~d~~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 152 (451)
..+.+.+.|+++++++|+|+||.||++||||++++++.++||+||+|.+|+.++++++.+.+..+.++...++++.+++.
T Consensus 6 ~~~~~~~~~~~~~~~~G~~~~d~dg~~~lD~~~~~~~~~~Gh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 85 (400)
T PTZ00125 6 GAHNYHPLPVVLKRGKGVFVWDVEGKKYYDFLSAYSAVNQGHCHPKILAALINQAQKLTLTSRAFYNDVLGLAEKYITDL 85 (400)
T ss_pred cccccCCCCccEEeeecCEEEeCCCCEEEEcccCHhhccCCcCCHHHHHHHHHHHHhcccccccccCHHHHHHHHHHHhC
Confidence 34456678899999999999999999999999999999999999999999999998876655444566788888889888
Q ss_pred cCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeC
Q 013008 153 SFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEY 232 (451)
Q Consensus 153 ~~~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (451)
.+.++++|++||++|++.|+++++.++..+.+.+ .++++||.++.+|||++...+..++.......+.+..+++..+++
T Consensus 86 ~~~~~~~~~~SGs~A~e~al~~~~~~~~~~~~~~-~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (400)
T PTZ00125 86 FGYDKVLPMNSGAEAGETALKFARKWGYEVKGIP-ENQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVDY 164 (400)
T ss_pred CCCCEEEEeCCcHHHHHHHHHHHHHHHHhccCCC-CCCCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeCC
Confidence 8889999999999999999999986642111000 136789999999999999988877654433344555567778899
Q ss_pred CCHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccccccCCCcceee
Q 013008 233 GNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMT 312 (451)
Q Consensus 233 ~d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~t 312 (451)
+|+++|+++++.+++++|++||+++++|.+.++++|+++|+++|++||+++|+||||+|+|++|.++..+.+++.||+++
T Consensus 165 ~d~~~le~~l~~~~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G~~~~~~~~~~~pd~~~ 244 (400)
T PTZ00125 165 NDVEALEKLLQDPNVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTGKLLAHDHEGVKPDIVL 244 (400)
T ss_pred CCHHHHHHHhCCCCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhHHHhcCCCCCEEE
Confidence 99999999997557999999999999999999999999999999999999999999999999998777777899999999
Q ss_pred ecccccCC-cccccccccHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH--------------HHhCCCC
Q 013008 313 LAKPLAGG-LPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS--------------KLARNPH 377 (451)
Q Consensus 313 ~sK~lg~G-~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~--------------~~~~~~~ 377 (451)
+||++++| +|+|++++++++++.+....+..|++++|+.++++.++|+.++++++.++ +...++.
T Consensus 245 ~sK~l~~g~~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~i~~~~~~~~~~~~~~~l~~~l~~l~~~~~~ 324 (400)
T PTZ00125 245 LGKALSGGLYPISAVLANDDVMLVIKPGEHGSTYGGNPLACAVAVEALEVLKEEKLAENAQRLGEVFRDGLKELLKKSPW 324 (400)
T ss_pred EcccccCCCcCcEEEEEcHHHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 99999988 59999999999999987666778999999999999999998865554433 1123355
Q ss_pred cceecccceeEEEEecC----ChHHHHHHHHHCCceeeecCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHhhc
Q 013008 378 VKDVRGLGLIIGIEFDV----SATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTLPVLDSN 449 (451)
Q Consensus 378 ~~~v~g~G~~~~~~~~~----~~~~~~~~l~~~Gv~~~~~~~~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~~~~ 449 (451)
+..+++.|+++++.++. ...++++.|+++||++.|.+. +.+||+|++.++++++++++++|+++++++..|
T Consensus 325 ~~~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~-~~lRi~~~~~~~~~~i~~~l~~l~~~l~~~~~~ 399 (400)
T PTZ00125 325 VKEIRGKGLLNAIVFDHSDGVNAWDLCLKLKENGLLAKPTHD-NIIRFAPPLVITKEQLDQALEIIKKVLKSFDSN 399 (400)
T ss_pred eEEEecccEEEEEEEccCcchHHHHHHHHHHHCCeEEeecCC-CEEEEECCccCCHHHHHHHHHHHHHHHHHHhcC
Confidence 55678899999998842 356789999999999998765 789999999999999999999999999987654
No 80
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=100.00 E-value=1.6e-56 Score=450.91 Aligned_cols=380 Identities=34% Similarity=0.578 Sum_probs=319.6
Q ss_pred hHHHHHHHHhcccccCCCCceEEEeecccEEEecCCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHH
Q 013008 62 NKEVMEAEKKLLVGTYNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIP 141 (451)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~p~~~~~~~G~~l~d~~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~ 141 (451)
.+++.+....+....+.+.|+.+++++|+|+||.||++||||.+++++.++||+||+|.+|+.++++++.+.+..+.++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~d~~g~~~lD~~~~~~~~~~Gh~~~~i~~a~~~~~~~~~~~~~~~~~~~ 84 (401)
T PRK00854 5 SEDLIATEQRLGAHNYKPLDVVLTRGEGVWVWDTDGNRYLDCLSAYSAVNQGHCHPKILAAMVEQAGRLTLTSRAFRNDQ 84 (401)
T ss_pred CHHHHHHHhhhhhcccCCCCceEEeeeeCEEEECCCCEEEEcCcchhhccCCCCCHHHHHHHHHHHhhccccccccCCHH
Confidence 34455444444555566788999999999999999999999999999999999999999999999998776555556777
Q ss_pred HHHHHHHHhhccCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCc
Q 013008 142 QIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFE 221 (451)
Q Consensus 142 ~~~l~~~l~~~~~~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~ 221 (451)
..+|+++|++..+.+++++++||++|++.|+++++.++....+. ..++++||+++.+|||++..++.+++.+..+..+.
T Consensus 85 ~~~l~~~l~~~~~~~~~~~~~SGs~A~e~al~~a~~~~~~~~g~-~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~~ 163 (401)
T PRK00854 85 LAPLYEELAALTGSHKVLPMNSGAEAVETAIKAVRKWGYEVKGV-PEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGFG 163 (401)
T ss_pred HHHHHHHHHhhCCCCEEEEeCCcHHHHHHHHHHHHHHHHhccCC-CCCCceEEEECCCcCCccHHHHhccCCccccccCC
Confidence 89999999999988899999999999999999999875221110 01367899999999999988887776655544556
Q ss_pred CCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccc
Q 013008 222 PVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAH 301 (451)
Q Consensus 222 ~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~ 301 (451)
+..+++.+++++|++++++.+.+ ++++|++||+++++|.+.++++||++|+++|++||++||+||+|+|||++|.+++.
T Consensus 164 ~~~~~~~~~~~~d~~~le~~i~~-~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~g~g~~g~~~~~ 242 (401)
T PRK00854 164 PFTPGFRVVPFGDAEALEAAITP-NTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQTGLGRTGKLLAE 242 (401)
T ss_pred CCCCCeEEeCCCCHHHHHHHhCC-CeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCchHhHH
Confidence 66778889999999999999964 68999999999999999989999999999999999999999999999999987777
Q ss_pred cccCCCcceeeecccccCC-cccccccccHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH----------
Q 013008 302 EHYGIFPDIMTLAKPLAGG-LPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS---------- 370 (451)
Q Consensus 302 ~~~~~~pdi~t~sK~lg~G-~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~---------- 370 (451)
+++++.||++++||++++| +|+|++++++++++.+....+..||+++|+.++++.++|+.+++++..++
T Consensus 243 ~~~g~~~D~~~~~K~l~gg~~~ig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aa~~a~L~~l~~~~~~~~~~~~~~~l~~ 322 (401)
T PRK00854 243 EHEGIEADVTLIGKALSGGFYPVSAVLSNSEVLGVLKPGQHGSTFGGNPLACAVARAALKVLTEEGMIENAAEMGAYFLE 322 (401)
T ss_pred hhcCCCCCEEEecccccCCccCeEEEEEcHHHHhcccCCCCCCCCCcCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 7789999999999999988 79999999999999887666788999999999999999998765444433
Q ss_pred HHhCC--CCcceecccceeEEEEec---CChHHHHHHHHHCCceeeecCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q 013008 371 KLARN--PHVKDVRGLGLIIGIEFD---VSATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTLP 444 (451)
Q Consensus 371 ~~~~~--~~~~~v~g~G~~~~~~~~---~~~~~~~~~l~~~Gv~~~~~~~~~~iri~~~~~~t~e~i~~~l~~l~~~l~ 444 (451)
.++.+ +.+..+++.|.++.+.+. ....++++.|+++||++.+.+. +.+|++|++.+++++|++++++|++++.
T Consensus 323 ~L~~~~~~~~~~~~g~g~~~~i~~~~~~~~~~~~~~~L~~~GV~v~~~~~-~~lR~~p~~~~t~e~i~~~i~~l~~~l~ 400 (401)
T PRK00854 323 GLRSIRSNIVREVRGRGLMLAVELEPEAGGARQYCEALKERGLLAKDTHD-HTIRLAPPLVITREQVDWALEQIAKVLA 400 (401)
T ss_pred HHHhhccCceEEEeccceEEEEEEecCchhHHHHHHHHHHCCeEEecCCC-CEEEEeCCcccCHHHHHHHHHHHHHHhh
Confidence 12222 224456888999998773 2357899999999999987654 7899999999999999999999998864
No 81
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=5.4e-55 Score=435.63 Aligned_cols=354 Identities=44% Similarity=0.742 Sum_probs=301.3
Q ss_pred CCCCceEEEeecccEEEecCCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHhhccCCC
Q 013008 77 YNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFAD 156 (451)
Q Consensus 77 ~~~~p~~~~~~~G~~l~d~~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~e 156 (451)
|.+.|+++++++|+||||.||++||||.+++++.+||| ||+|++|+.++++++.............++++++... ...
T Consensus 8 ~~~~~~~~~~~~G~~l~d~dg~~~lD~~s~~~~~~lG~-~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~-~~~ 85 (375)
T PRK04260 8 YKRAAIEFVKAEGNYLIDTDGKKYLDFSSGIGVTNLGF-HPQVQQALQKQAGLIWHSPNLYLNSLQEEVAQKLIGD-KDY 85 (375)
T ss_pred cCCCCceEEEeeeCEEEeCCCCEEEECCCCcccccCCC-CHHHHHHHHHHHHhcCcccCccCCHHHHHHHHHHhcC-cCC
Confidence 44568899999999999999999999999999999999 9999999999998754433334455567777766542 133
Q ss_pred eEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHH
Q 013008 157 RVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIE 236 (451)
Q Consensus 157 ~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 236 (451)
.++|++||+||++.|+++++.++ ++++||+++++|||++..+++.++.......+.+..+.+...+++|++
T Consensus 86 ~~~~~~SGseA~~~Al~~ar~~~---------~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~ 156 (375)
T PRK04260 86 LAFFCNSGAEANEAAIKIARKAT---------GKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYAIFNDLN 156 (375)
T ss_pred EEEEcCccHHHHHHHHHHHHHhc---------CCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEeCCCCHH
Confidence 67999999999999999999875 477899999999999999888776554444444444445556788999
Q ss_pred HHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccccccCCCcceeeeccc
Q 013008 237 ATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKP 316 (451)
Q Consensus 237 ~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~t~sK~ 316 (451)
++++++. +++++|++||+++++|.++++.+||++|+++|++||+++|+||+|+|||++|.++.++.+++.||++||||+
T Consensus 157 ~l~~~l~-~~~a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g~~~~~~~~~~~pdi~t~sK~ 235 (375)
T PRK04260 157 SVKALVN-KNTAAVMLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTGKLYAFEHYGIEPDIFTLAKG 235 (375)
T ss_pred HHHHhcC-CCeEEEEECCeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhHhhCCCCCEEEeccc
Confidence 9999885 468999999999999999999999999999999999999999999999999987777788999999999999
Q ss_pred ccCCcccccccccHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH--------------HHhCCCCcceec
Q 013008 317 LAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS--------------KLARNPHVKDVR 382 (451)
Q Consensus 317 lg~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~--------------~~~~~~~~~~v~ 382 (451)
+++|+|+|++++++++++.+....+.+||++||++++++.++|+.++.+++.++ ++.+++.+..++
T Consensus 236 l~~G~~ig~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 315 (375)
T PRK04260 236 LANGVPVGAMLAKSSLGGAFGYGSHGSTFGGNKLSMAAASATLDIMLTAGFLEQALENGNYLQEQLQKALQDKETVTTVR 315 (375)
T ss_pred ccCCcceEEEEEcHHHHhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEe
Confidence 999999999999999999987666788999999999999999998876666555 233455566788
Q ss_pred ccceeEEEEecCChHHHHHHHHHCCceeeecCCCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 013008 383 GLGLIIGIEFDVSATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTL 443 (451)
Q Consensus 383 g~G~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~iri~~~~~~t~e~i~~~l~~l~~~l 443 (451)
+.|+++++++......+.++|+++||++.|.+. +.+|+.|++.++++++++++++|++++
T Consensus 316 ~~g~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~-~~lR~~~~~~~t~~~i~~~l~~l~~~~ 375 (375)
T PRK04260 316 GLGYMIGIETTADLSQLVEAARDKGLIVLTAGT-NVIRLLPPLTLTKEEIEQGIAILSEVF 375 (375)
T ss_pred ccceEEEEEecCcHHHHHHHHHhCCCEEecCCC-CEEEEcCCCccCHHHHHHHHHHHHHhC
Confidence 899999999866678899999999999988765 789999999999999999999998753
No 82
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=100.00 E-value=2.1e-54 Score=436.49 Aligned_cols=369 Identities=21% Similarity=0.310 Sum_probs=290.8
Q ss_pred cccccchhhhccCCCCCCcchHHHHHHHHhcccccCC-CCceEEEeecccEEEecCCCEEEeeccCcccccCCCCCHHHH
Q 013008 42 SVNVEVNDAARGSAGGLGRNNKEVMEAEKKLLVGTYN-RAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWI 120 (451)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~G~~l~d~~G~~~iD~~~~~~~~~lG~~~p~v~ 120 (451)
|.+| +++|.+++|+|+++..+.+ ..|. +.|+++++++|+|+||.||++||||.+++++.+|||+||+|.
T Consensus 1 s~~l-~~~a~~~~p~g~~~~~~~~---------~~~~~~~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~ 70 (431)
T PRK06209 1 SQLL-QSRLHALIPGGAHTYAKGD---------DQYPELAPGFIQRGSGAHVWDVDGNEYIEYGMGLRAVGLGHAYPPVV 70 (431)
T ss_pred CHHH-HHHHHhhCCCCCCCCcccc---------ccCCCCCCeEEEeccCCEEEeCCCCEEEEccccccchhcCCCCHHHH
Confidence 4567 8999999999998777632 1122 468999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcccccCCCCCHHHHHHHHHHhhccC-CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEE-cC
Q 013008 121 KAVVDQANVLTHVSNMYYSIPQIELAKRLVACSF-ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSF-TN 198 (451)
Q Consensus 121 ~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~-~~ 198 (451)
+|+.+|+++... ....+....+|+++|++..+ .++|+|++||+||++.|+|+||.||+ |.+|+.+ ..
T Consensus 71 ~Ai~~q~~~~~~--~~~~~~~~~~la~~l~~~~p~~~~v~f~~sGseA~e~AlklAr~~tg---------r~~i~~~~~~ 139 (431)
T PRK06209 71 EAVREALQDGCN--FTRPSAIELDAAESFLELIDGADMVKFCKNGSDATSAAVRLARAYTG---------RDLVARCADH 139 (431)
T ss_pred HHHHHHHHhCcC--CCCCCHHHHHHHHHHHHhCCccceEEEecCHHHHHHHHHHHHHHHhC---------CCeEEEeccC
Confidence 999999998643 22344446689999999886 68999999999999999999999984 7789888 67
Q ss_pred CccCChhhhhhccCCCCcCCCC-cCCCCCeeEeeCCCHHHHHHhcC--CCCeEEEEEccccCCCCccccCHHHHHHHHHH
Q 013008 199 SFHGRTMGALALTSKEHYRSPF-EPVMPGVNFVEYGNIEATRKLIQ--PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDA 275 (451)
Q Consensus 199 ~yhg~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~d~~~le~~l~--~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l 275 (451)
+|||+.......+. ..... .........+++||+++|+++++ .+++++||+||++++ .++++||++|+++
T Consensus 140 ~~h~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~aavi~Epv~g~----~~~~~~l~~l~~l 212 (431)
T PRK06209 140 PFFSTDDWFIGTTP---MSAGIPASVSALTVTFRYNDIASLEALFEDHPGRIACVILEPATAD----EPQDGFLHEVRRL 212 (431)
T ss_pred ccccccccccccCC---CCCCCChhHhccccccCCCCHHHHHHHHHhCCCCEEEEEEccccCC----CCCHHHHHHHHHH
Confidence 77764322111000 00000 01112345678899999999986 357999999999876 6789999999999
Q ss_pred HHHhCCEEEEeccccCCCcccccccccccCCCcceeeecccccCCcccccccccHHHHhh--cc----C--CCccCCCCC
Q 013008 276 CDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASA--IN----Y--GDHGSTFAG 347 (451)
Q Consensus 276 ~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~t~sK~lg~G~~iG~v~~~~~i~~~--~~----~--~~~~~t~~~ 347 (451)
|++||++||+|||++||++.+ ++..+++++.||++|+||++|+|+|+|++++++++++. +. . ..+++|+++
T Consensus 213 c~~~g~lLI~DEv~tG~~~~~-~g~~~~~gv~PDi~t~gK~lggG~p~~av~~~~~i~~~~~~~~~~~~~~~~~~~T~~~ 291 (431)
T PRK06209 213 CHENGALFILDEMITGFRWHM-RGAQKLYGIVPDLSCFGKALGNGFAVSALAGKREYMELGGLEHTDRERVFLLSTTHGA 291 (431)
T ss_pred HHHcCCEEEEEcccccCCcCc-chhhHHhCCCcceeeehhhhcCCcccEEEEEHHHHHhhhcccccCCCCceeeccCCCC
Confidence 999999999999999997653 33455689999999999999999999999999999987 31 1 136789999
Q ss_pred cHHHHHHHHHHHHHhcChHHHHH--------------HHhCCCCcceecccceeEEEEec------CC----hHHHHHHH
Q 013008 348 SPLVCNAAIAVLDKISNPAFLAS--------------KLARNPHVKDVRGLGLIIGIEFD------VS----ATPVVDAC 403 (451)
Q Consensus 348 ~~~~~aaa~aal~~~~~~~~~~~--------------~~~~~~~~~~v~g~G~~~~~~~~------~~----~~~~~~~l 403 (451)
||++|+|++++|++++++++.++ +..+++....+++.|.+..+.+- .. ...+.+.|
T Consensus 292 np~~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~L~~~~~~~~~~~~vr~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~l 371 (431)
T PRK06209 292 ETHALAAAIATMAIYRDEDVIERLHEQGAKLAAGVNEAAAEHGLQDHVRVSGRPCCLTYSTLDGNGQPSQAFRTLFLQET 371 (431)
T ss_pred CHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeecceEEEEEecCCcccCCcHHHHHHHHHHH
Confidence 99999999999999987766555 22346666668888887777651 11 12567888
Q ss_pred HHCCceeeecCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHh
Q 013008 404 RDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTLPVLD 447 (451)
Q Consensus 404 ~~~Gv~~~~~~~~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~~ 447 (451)
+++|+++.| + +++..||++||++++++|++++++++
T Consensus 372 ~~~Gi~~p~------l--~is~~ht~~dId~~l~~l~~~l~~~~ 407 (431)
T PRK06209 372 IRRGVLMPS------L--VVSYAHGDADIERTIDAVHGALGVYR 407 (431)
T ss_pred HHCCccccc------c--cccccCCHHHHHHHHHHHHHHHHHHH
Confidence 999998732 3 44678999999999999999998874
No 83
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=100.00 E-value=1.6e-53 Score=431.02 Aligned_cols=355 Identities=46% Similarity=0.789 Sum_probs=304.5
Q ss_pred CCceEEEeecccEEEecCCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccCC-CCCHHHHHHHHHHhhccC--C
Q 013008 79 RAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNM-YYSIPQIELAKRLVACSF--A 155 (451)
Q Consensus 79 ~~p~~~~~~~G~~l~d~~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~-~~~~~~~~l~~~l~~~~~--~ 155 (451)
+.|+++++++|.++||.||++||||.+|+++.++||+||+|.+++.+++++..+.... +.++...+++++|++.++ .
T Consensus 17 ~~~~~~~~~~g~~~~d~dG~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 96 (413)
T cd00610 17 PYPLVIVRAEGAYLYDVDGNRYLDFLSGIGVLNLGHNHPEVVEALKEQLAKLTHFSLGFFYNEPAVELAELLLALTPEGL 96 (413)
T ss_pred CCCceEEeeecCEEEeCCCCEEEEcCccHHhhccCCCCHHHHHHHHHHHHhCcCccCcccCCHHHHHHHHHHHHhCCCCC
Confidence 5789999999999999999999999999999999999999999999999775443222 246679999999999998 8
Q ss_pred CeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCC--
Q 013008 156 DRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYG-- 233 (451)
Q Consensus 156 e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 233 (451)
++++|++||++|++.|+++++.++ ++++||+++++|||++...+..++...+...+.+...++..+|++
T Consensus 97 ~~v~~~~sgsea~~~al~~~~~~~---------~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (413)
T cd00610 97 DKVFFVNSGTEAVEAALKLARAYT---------GRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYR 167 (413)
T ss_pred CEEEEcCcHHHHHHHHHHHHHHHc---------CCCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCcc
Confidence 999999999999999999998776 488999999999999999888776544444444555667788888
Q ss_pred ---------CHHHHHHhcCC--CCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCccccccccc
Q 013008 234 ---------NIEATRKLIQP--GKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHE 302 (451)
Q Consensus 234 ---------d~~~le~~l~~--~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~ 302 (451)
|+++|+++++. +++++|++||+++++|.+.++++|+++|+++|++||+++|+||+|+|||++|.++.++
T Consensus 168 ~~~~~~~~~d~~~l~~~l~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~~g~~~~~~ 247 (413)
T cd00610 168 YRPPAELADDLEALEEALEEHPEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRTGKMFAFE 247 (413)
T ss_pred ccchhhHHHHHHHHHHHHhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchhhHh
Confidence 89999999874 5799999999999999988999999999999999999999999999999999877788
Q ss_pred ccCCCcceeeecccccCCcccccccccHHHHhhc--cCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH----------
Q 013008 303 HYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAI--NYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS---------- 370 (451)
Q Consensus 303 ~~~~~pdi~t~sK~lg~G~~iG~v~~~~~i~~~~--~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~---------- 370 (451)
++++.||++++||++++|+|+|++++++++++.+ ....+.+|+++||++++++.++|+.++++++.++
T Consensus 248 ~~~~~~d~~t~sK~l~~g~~~g~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~a~l~~l~~~~~~~~~~~~~~~l~~ 327 (413)
T cd00610 248 HFGVEPDIVTLGKGLGGGLPLGAVLGREEIMDAFPAGPGLHGGTFGGNPLACAAALAVLEVLEEEGLLENAAELGEYLRE 327 (413)
T ss_pred hcCCCCCeEEEcccccCccccEEEEEcHHHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 8899999999999999999999999999999986 4455678999999999999999998866555444
Q ss_pred ----HHhCCCCcceecccceeEEEEecC----------ChHHHHHHHHHCCceeeecCCCCEEEEeCCCCCCHHHHHHHH
Q 013008 371 ----KLARNPHVKDVRGLGLIIGIEFDV----------SATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAV 436 (451)
Q Consensus 371 ----~~~~~~~~~~v~g~G~~~~~~~~~----------~~~~~~~~l~~~Gv~~~~~~~~~~iri~~~~~~t~e~i~~~l 436 (451)
+...++.+..+++.|.++++.+.. ....+++.|+++||++.|++. +.+|++|++.+|++++++++
T Consensus 328 ~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~~~~~-~~lR~~~~~~~t~~~i~~~~ 406 (413)
T cd00610 328 RLRELAEKHPLVGDVRGRGLMIGIELVKDRATKPPDKELAAKIIKAALERGLLLRPSGG-NVIRLLPPLIITEEEIDEGL 406 (413)
T ss_pred HHHHHHhhCCcEEEeecCceEEEEEEecCCCcCCcchHHHHHHHHHHHHCCeEEeecCC-CEEEEECCCcCCHHHHHHHH
Confidence 111124455567889999998842 346788999999999998763 78999999999999999999
Q ss_pred HHHHHHH
Q 013008 437 EILCKTL 443 (451)
Q Consensus 437 ~~l~~~l 443 (451)
++|++++
T Consensus 407 ~~l~~~l 413 (413)
T cd00610 407 DALDEAL 413 (413)
T ss_pred HHHHHhC
Confidence 9998763
No 84
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=100.00 E-value=4e-53 Score=380.46 Aligned_cols=357 Identities=27% Similarity=0.504 Sum_probs=294.3
Q ss_pred CCCCceEEEeecccEEEecCCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHhhccC-C
Q 013008 77 YNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSF-A 155 (451)
Q Consensus 77 ~~~~p~~~~~~~G~~l~d~~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~ 155 (451)
|..-|+.++|++|.|++|.+|++|||+.++.. ..|||||+|++|..+|+...... ..+.++...+.++.|...++ .
T Consensus 26 y~sDP~kivRaq~QYmfDE~g~~yLDCInNVa--Hvghchp~VV~A~~kQmat~~tN-~RFlhd~lv~cA~~l~stlPeL 102 (452)
T KOG1403|consen 26 YRSDPLKIVRAQGQYMFDEEGTRYLDCINNVA--HVGHCHPEVVRAGAKQMATISTN-NRFLHDELVQCARTLTSTLPEL 102 (452)
T ss_pred ecCCchhhehhccceeeccCcccHHHHhhhhh--hcccCCHHHHHHHHHHHhHhccc-chhhHHHHHHHHHHHhhcCCCc
Confidence 45679999999999999999999999999855 78999999999999999875432 34555567788888888776 8
Q ss_pred CeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEe-eCC-
Q 013008 156 DRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFV-EYG- 233 (451)
Q Consensus 156 e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~- 233 (451)
+-++|+|||+|||.+|+|+||.||+ ..++|+.+.+|||+....+.++....-.. -....|+.+.+ |.+
T Consensus 103 svc~F~NSGSEANDLALRLAR~ftk---------hqDvItldHAYHGHl~s~mE~SPYKF~~g-~~v~kpd~VHVAPcPD 172 (452)
T KOG1403|consen 103 SVCFFVNSGSEANDLALRLARNFTK---------HQDVITLDHAYHGHLQSVMEVSPYKFNQG-GGVAKPDYVHVAPCPD 172 (452)
T ss_pred eEEEEecCCchhhHHHHHHHHhhcc---------cCceEEEechhccceeeeeeccceeccCC-CCcCCCceeEecCCcc
Confidence 8999999999999999999999985 67899999999999877776663221110 00111222111 111
Q ss_pred --------------C-----HHHHHHhcC-----CCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccc
Q 013008 234 --------------N-----IEATRKLIQ-----PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQ 289 (451)
Q Consensus 234 --------------d-----~~~le~~l~-----~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~ 289 (451)
| .+.++++++ ...++++|.|..++.||-+.||.+|++.+.+..+.+|.+.|.|||+
T Consensus 173 vyrGK~r~~~~~~a~~~~~Yad~vk~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQ 252 (452)
T KOG1403|consen 173 VYRGKFRDKMYPDADMGALYADPVKEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQ 252 (452)
T ss_pred ccccccccccCCcccchhhhhhHHHHHHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhh
Confidence 1 345556554 3468999999999999999999999999999999999999999999
Q ss_pred cCCCcccc-cccccccCCCcceeeecccccCCcccccccccHHHHhhccC--CCccCCCCCcHHHHHHHHHHHHHhcChH
Q 013008 290 CGLGRTGY-LWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINY--GDHGSTFAGSPLVCNAAIAVLDKISNPA 366 (451)
Q Consensus 290 tg~gr~G~-~~~~~~~~~~pdi~t~sK~lg~G~~iG~v~~~~~i~~~~~~--~~~~~t~~~~~~~~aaa~aal~~~~~~~ 366 (451)
.||||.|+ .|+++.+++.|||+|++|.+|+|.|+++|+..++|.+.|.. .....||+|||++||+++++++++++++
T Consensus 253 vGFGRvG~hyWafq~y~fiPDIVtmgKpmGNGhPVa~VattkeIA~Af~atgv~YFNTyGGnPVsCAv~laVm~v~e~E~ 332 (452)
T KOG1403|consen 253 VGFGRVGSHYWAFQTYNFIPDIVTMGKPMGNGHPVAAVATTKEIAQAFHATGVEYFNTYGGNPVSCAVGLAVMRVCEDEN 332 (452)
T ss_pred hcccccchhhhhhhhhccccchheecccCCCCCeeeEEeccHHHHHHhccccceehhccCCCchhHHHHHHHHHHHhhhh
Confidence 99999997 78999999999999999999999999999999999999964 2456899999999999999999999888
Q ss_pred HHHH--------------HHhCCCCcceecccceeEEEEe--c----C----ChHHHHHHHHH-CCceeeecCC-CCEEE
Q 013008 367 FLAS--------------KLARNPHVKDVRGLGLIIGIEF--D----V----SATPVVDACRD-SGLLVLTAGK-GNVVR 420 (451)
Q Consensus 367 ~~~~--------------~~~~~~~~~~v~g~G~~~~~~~--~----~----~~~~~~~~l~~-~Gv~~~~~~~-~~~ir 420 (451)
+.++ +..+++++.++||.|+|+++++ + . .+..+..+|.+ +||++...|+ .+.+.
T Consensus 333 Lq~ha~~vG~~L~~lL~~~k~kh~~IGDvRGvGLFiGIdLVkD~~tRtP~tk~A~~~v~rlke~y~VLlsaDGPh~NilK 412 (452)
T KOG1403|consen 333 LQEHAQQVGEKLEVLLRRLKQKHECIGDVRGVGLFIGIDLVKDRKTRTPDTKEAHWVVNRLKELYRVLLSADGPHRNILK 412 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhccceeccccceEEEeeeeecccccCCCcHHHHHHHHHHHHHhhhEEEecCCCCCceee
Confidence 8776 4467889999999999999998 2 1 13345566665 4799887665 47899
Q ss_pred EeCCCCCCHHHHHHHHHHHHHHHHHH
Q 013008 421 LVPPLIISEQELDQAVEILCKTLPVL 446 (451)
Q Consensus 421 i~~~~~~t~e~i~~~l~~l~~~l~~~ 446 (451)
|-||.+.++|+.++.+..|+++|.-+
T Consensus 413 iKPPmCFneena~e~v~~ld~iLT~m 438 (452)
T KOG1403|consen 413 IKPPMCFNEENADEFVLGLDEILTVM 438 (452)
T ss_pred cCCCcccChhhHHHHHHHHHHHHHHH
Confidence 99999999999999999999988644
No 85
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=100.00 E-value=1.2e-50 Score=405.31 Aligned_cols=362 Identities=52% Similarity=0.868 Sum_probs=303.3
Q ss_pred cCCCCceEEEeecccEEEecCCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHhhccCC
Q 013008 76 TYNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFA 155 (451)
Q Consensus 76 ~~~~~p~~~~~~~G~~l~d~~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 155 (451)
++.+.|+++++++|.++||.||++||||.+++++++|||+||.|.+++.+++++..+.+..+.++...+|+++|+++++.
T Consensus 5 ~~~~~~~~~~~~~g~~~~~~~g~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~ 84 (379)
T TIGR00707 5 TYGRLPVKIVRGKGAYVYDVNGKEYLDFVAGIAVNSLGHAHPKLVEALKEQLEKLVHVSNLYYTEPQEELAEKLVEHSGA 84 (379)
T ss_pred ccCCCCccEEEeecCEEEeCCCCEEEEcCcchhhccCCCCCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhhCCC
Confidence 34578999999999999999999999999999999999999999999999998865444445677799999999999998
Q ss_pred CeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCH
Q 013008 156 DRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNI 235 (451)
Q Consensus 156 e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 235 (451)
+++++++||++|++.++++++.+++.+++ ++++|++++++|||+...+...++...+...+.+..+++.+++++|+
T Consensus 85 ~~~~~~~sg~~a~~~a~~~~~~~~~~~~~----~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 160 (379)
T TIGR00707 85 DRVFFCNSGAEANEAALKLARKYTGDKGK----EKKKIIAFENSFHGRTMGALSATGQPKYQKGFEPLVPGFSYAPYNDI 160 (379)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHhhccCC----CCCeEEEECCCcCCccHHHHHhcCChhhhccCCCCCCCceeeCCCCH
Confidence 89999999999999999999877642211 36899999999999998888776654433334455566778888999
Q ss_pred HHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccccccCCCcceeeecc
Q 013008 236 EATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAK 315 (451)
Q Consensus 236 ~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~t~sK 315 (451)
+++++.+.+ ++++|+++|+++++|..+++.+++++|.++|++||+++|+||+|++||+.|.++.....++.||+++|||
T Consensus 161 ~~l~~~~~~-~~~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~g~~~~~~~~~~~~d~~t~sK 239 (379)
T TIGR00707 161 ESLKKAIDD-ETAAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTGKFFAYEHYGIEPDIITLAK 239 (379)
T ss_pred HHHHHHhhh-CeeEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhhHHhcCCCCCEEEEcc
Confidence 999999864 5789999999999988778999999999999999999999999999998887555566788999999999
Q ss_pred cccCCcccccccccHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH-------HH---hCC--C-Ccceec
Q 013008 316 PLAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS-------KL---ARN--P-HVKDVR 382 (451)
Q Consensus 316 ~lg~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~-------~~---~~~--~-~~~~v~ 382 (451)
++++|+|+|++++++++++.+....+..+++.|+++++++.++|+.++..++.++ +. ++. . ....++
T Consensus 240 ~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~aaL~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 319 (379)
T TIGR00707 240 GLGGGVPIGATLAKEEVAEAFTPGDHGSTFGGNPLACAAALAVLEVIEKERLLENVKEKGDYFKERLEELGKNYPNKEVR 319 (379)
T ss_pred cccCCcccEEEEEcHHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhCCCCccc
Confidence 9998999999999999999987666677889999999999999997765444333 11 111 0 123345
Q ss_pred ccceeEEEEecCChHHHHHHHHHCCceeeecCCCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 013008 383 GLGLIIGIEFDVSATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTL 443 (451)
Q Consensus 383 g~G~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~iri~~~~~~t~e~i~~~l~~l~~~l 443 (451)
+.|.++++.+.....++.+.|.++||++.|.+. +.+|++|++.+++|++++++++|++++
T Consensus 320 ~~g~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~-~~lRi~~~~~~t~~~i~~~~~~l~~~~ 379 (379)
T TIGR00707 320 GKGLMLGIELEAPCKDIVKKALEKGLLVNCAGP-KVLRFLPPLIITKEEIDEAVSALEEAI 379 (379)
T ss_pred cCceEEEEEecCcHHHHHHHHHHCCcEEeeCCC-CEEEEECCCcCCHHHHHHHHHHHHHhC
Confidence 678899998855577899999999999998765 789999999999999999999998763
No 86
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=2.1e-42 Score=317.62 Aligned_cols=383 Identities=27% Similarity=0.379 Sum_probs=286.4
Q ss_pred ccCCCCCCcchHHHHHHHHhcccccCCCCceEEEeecccEEEecCCCEEEeeccCcccccCCCCCHHHHHHHHH-HHhh-
Q 013008 52 RGSAGGLGRNNKEVMEAEKKLLVGTYNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVD-QANV- 129 (451)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~G~~l~d~~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~-~~~~- 129 (451)
+++||. ..+++.+...++....--.+++-.+++.|+|++|+|||.+||..+.....++|++||.+++++.+ +..+
T Consensus 33 esIPGP---ks~~l~kel~~v~~t~~v~F~~dYEkS~GNYlvDvDGN~lLDvYsQIsSvplGYn~P~LvK~a~~p~~~~~ 109 (484)
T KOG1405|consen 33 ESIPGP---KSQELKKELDKVQDTEAVHFFVDYEKSIGNYLVDVDGNRLLDVYSQISSVPLGYNNPALVKAAQQPQNATM 109 (484)
T ss_pred ccCCCc---hhHHHHHHHhHhhcccceEEehhhhhhcCceEEecCCCeeehhhhhhcccccCCCCHHHHHHhcChHHHHH
Confidence 456665 66776665544333222234566789999999999999999999999999999999999988764 2222
Q ss_pred cccccCCCCCHHHHHHHHHHhh----ccC--CCeEEecCCHHHHHHHHHHHHHHHhh--hcCCC---------------C
Q 013008 130 LTHVSNMYYSIPQIELAKRLVA----CSF--ADRVFFSNTGTEANEAAIKFARKFQR--HSNPD---------------S 186 (451)
Q Consensus 130 ~~~~~~~~~~~~~~~l~~~l~~----~~~--~e~v~~~~sG~eA~~~al~~a~~~~~--~~~~~---------------~ 186 (451)
+...+ ....-+..++++.|.+ ..+ ...|...-+|+.||+.|++++.-|.+ .++.. +
T Consensus 110 lvnRP-ALg~fP~kd~~~~l~~~ll~~APKG~~~v~tm~cGs~aNEnA~K~afiwy~~k~rg~~~~s~~e~eScm~n~aP 188 (484)
T KOG1405|consen 110 LVNRP-ALGNFPPKDFAEKLRQSLLSIAPKGQKQVITMLCGSCANENAYKTAFIWYRAKERGQAGFSAEELESCMINQAP 188 (484)
T ss_pred Hhccc-cccCCChhhHHHHHHHHHHhhCcchHHHHHHHhccccccHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHhcCCC
Confidence 21111 1122224455555544 333 67899999999999999999886653 22211 1
Q ss_pred CCCCceEEEEcCCccCChhhhhhccCCCCcCC-C---C-cCCCCCee--------EeeCC------CHHHHHHhcC----
Q 013008 187 KEPATEFVSFTNSFHGRTMGALALTSKEHYRS-P---F-EPVMPGVN--------FVEYG------NIEATRKLIQ---- 243 (451)
Q Consensus 187 ~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~-~---~-~~~~~~~~--------~~~~~------d~~~le~~l~---- 243 (451)
+.|.-.|+.|.++|||++.++++.+....++. + | +|. ..+. .+.+| .++++|++|.
T Consensus 189 g~P~lsvlsF~gaFHGR~~g~lstT~SKpIHKldiPaFdWPi-A~fP~ykYPLdenv~~N~ked~~Cl~~Ve~li~~~~~ 267 (484)
T KOG1405|consen 189 GAPDLSVLSFKGAFHGRTFGSLSTTHSKPIHKLDIPAFDWPI-APFPRYKYPLDENVAENKKEDQGCLAEVEDLIVKYRK 267 (484)
T ss_pred CCCceeeeeeccccccccccccccccCccccccCCCCCCCCC-CCCccccCChhhhhhhhhhhhhhHHHHHHHHHHHHhh
Confidence 24566799999999999999988763322221 1 1 111 1111 11122 3788888886
Q ss_pred -CCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccccccCC--CcceeeecccccCC
Q 013008 244 -PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGI--FPDIMTLAKPLAGG 320 (451)
Q Consensus 244 -~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~--~pdi~t~sK~lg~G 320 (451)
+..++++|+||++++||....+++|++.|+++|+|||+.+|+||||||-|.||+.|+++++++ .||++||||-+-.|
T Consensus 268 k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~~PpD~vTFSKK~q~g 347 (484)
T KOG1405|consen 268 KKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLDSPPDVVTFSKKFQTG 347 (484)
T ss_pred cCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCceeeehhcCCCCCccceehhhhhhcC
Confidence 246999999999999999999999999999999999999999999999999999999999988 58999999988532
Q ss_pred cccccccccHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH--------------HHhCCC-Ccceecccc
Q 013008 321 LPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS--------------KLARNP-HVKDVRGLG 385 (451)
Q Consensus 321 ~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~--------------~~~~~~-~~~~v~g~G 385 (451)
|+. -.++++.. .+..+..||.|.|.-.....++++.+.+++++++ +.+++| .+..+||+|
T Consensus 348 ---Gff-h~~~frpn-~pYrifNTWmGdP~k~lll~~vv~~I~~~~Ll~n~~~vG~~l~~gL~~Lq~~~p~~~~~~RGrG 422 (484)
T KOG1405|consen 348 ---GFF-HDEEFRPN-EPYRIFNTWMGDPSKNLLLEEVVQEIKREDLLNNVAHVGKALLKGLLELQAKYPGKINNLRGRG 422 (484)
T ss_pred ---ccc-cCcccCCC-chHHHhhhhcCChHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhcccccc
Confidence 332 22232211 1224568999999988888899999999888877 557788 577899999
Q ss_pred eeEEEEec--CChHHHHHHHHHCCceeeecCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 013008 386 LIIGIEFD--VSATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTLPV 445 (451)
Q Consensus 386 ~~~~~~~~--~~~~~~~~~l~~~Gv~~~~~~~~~~iri~~~~~~t~e~i~~~l~~l~~~l~~ 445 (451)
.|+.+++. ...+.++..+.-+|+.+..+|. ..+||+|+++.++.+.+-+++++++.++.
T Consensus 423 TF~a~d~ps~~~Rdk~i~~~~~nGv~~GGCg~-~siRfRPsLvf~~~Ha~i~l~~~~k~l~~ 483 (484)
T KOG1405|consen 423 TFIAWDCPSGSIRDKLILIARLNGVNLGGCGD-KSIRFRPSLVFRKHHADIFLDIFDKILAG 483 (484)
T ss_pred eEEEEeCCChHHHHHHHHHHHHcCceeccccc-ceeeeccceeehhhhHHHHHHHHHHHhcc
Confidence 99999994 2345688888899999999887 78999999999999999999999998864
No 87
>PRK07505 hypothetical protein; Provisional
Probab=100.00 E-value=2.7e-40 Score=332.67 Aligned_cols=358 Identities=16% Similarity=0.125 Sum_probs=260.4
Q ss_pred chHHHHHHHHhcccccC--CCCceEEEeecccEEEecCCCEEEeeccCcccccCC-CCCHHHHHHHHHHHhhcc---ccc
Q 013008 61 NNKEVMEAEKKLLVGTY--NRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALG-HGDADWIKAVVDQANVLT---HVS 134 (451)
Q Consensus 61 ~~~~~~~~~~~~~~~~~--~~~p~~~~~~~G~~l~d~~G~~~iD~~~~~~~~~lG-~~~p~v~~a~~~~~~~~~---~~~ 134 (451)
+.+.+..+.++...+.| ++.++.+++++|+++||.||++||||.++ ..+| |+||+|++|+.+++++++ +.+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~d~~g~~~ld~~s~---~~lgl~~~p~v~~A~~~~l~~~g~~~~~~ 83 (402)
T PRK07505 7 NNKKRINRAEKFWDAAYDEGLNGLTVGEREGILITLADGHTFVNFVSC---SYLGLDTHPAIIEGAVDALKRTGSLHLSS 83 (402)
T ss_pred HHHHHHHhhHHHHHHHHhcccccceeeccCCccEEecCCceEEEeecC---CccCCCCCHHHHHHHHHHHHHhCCCCCCc
Confidence 34444444433333333 35578899999999999999999999984 4688 999999999999998754 111
Q ss_pred C--CCCCHHHHHHHHHHhhccCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccC
Q 013008 135 N--MYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTS 212 (451)
Q Consensus 135 ~--~~~~~~~~~l~~~l~~~~~~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~ 212 (451)
. ...++...+++++|++.++. ++++++||++|++.++++++.... + .++.++|+++++|||.......
T Consensus 84 ~~~~~~~~~~~~l~~~la~~~~~-~~~~~~sG~~a~~~ai~~~~~~~~---~---~~~~~vi~~~~~~H~s~~~~~~--- 153 (402)
T PRK07505 84 SRTRVRSQILKDLEEALSELFGA-SVLTFTSCSAAHLGILPLLASGHL---T---GGVPPHMVFDKNAHASLNILKG--- 153 (402)
T ss_pred cchhhhhHHHHHHHHHHHHHhCC-CEEEECChHHHHHHHHHHHHhccc---C---CCCCCEEEEchhhhHhHHhhhh---
Confidence 1 13455689999999999887 778888999999999998764210 0 0245699999999985421110
Q ss_pred CCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccc--c
Q 013008 213 KEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQ--C 290 (451)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~--t 290 (451)
... ...++..+|++|+++|+++++++..++|++||++++|+ +.+ +++|+++|++||++||+||+| +
T Consensus 154 ---~~~----~~~~v~~~~~~d~~~l~~~~~~~~~~~vl~~p~~~~G~-~~~----~~~i~~l~~~~~~~li~DEa~~~~ 221 (402)
T PRK07505 154 ---ICA----DETEVETIDHNDLDALEDICKTNKTVAYVADGVYSMGG-IAP----VKELLRLQEKYGLFLYIDDAHGLS 221 (402)
T ss_pred ---hhh----cCCeEEEeCCCCHHHHHHHHhcCCCEEEEEecccccCC-cCC----HHHHHHHHHHcCCEEEEECccccc
Confidence 010 12467788999999999999766688999999998855 455 899999999999999999998 5
Q ss_pred CCCcccccccccccCC-Cccee----eecccccCCccccccc-ccHHHHhhccCCCccCCCCCc--HHHHHHHHHHHHHh
Q 013008 291 GLGRTGYLWAHEHYGI-FPDIM----TLAKPLAGGLPIGAAL-VTEKVASAINYGDHGSTFAGS--PLVCNAAIAVLDKI 362 (451)
Q Consensus 291 g~gr~G~~~~~~~~~~-~pdi~----t~sK~lg~G~~iG~v~-~~~~i~~~~~~~~~~~t~~~~--~~~~aaa~aal~~~ 362 (451)
++|++|.+++.++++. .||.+ |+||+++++ .|+++ .++++++.+....+..||+++ +++++++.++++.+
T Consensus 222 ~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~~--Gg~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~aa~~a~l~~~ 299 (402)
T PRK07505 222 IYGKNGEGYVRSELDYRLNERTIIAASLGKAFGAS--GGVIMLGDAEQIELILRYAGPLAFSQSLNVAALGAILASAEIH 299 (402)
T ss_pred CcCCCCCchHHHHcCCCCCCCeEEEEechhhhhcc--CeEEEeCCHHHHHHHHHhCCCceeCCCCCHHHHHHHHHHHHHH
Confidence 6888888767677786 67744 799999853 36665 478888888765666777654 58999999999865
Q ss_pred cChHHH---HHHH---hCCCC--cceecccceeE-EEEecC--ChHHHHHHHHHCCceeeecCC------CCEEEEeCCC
Q 013008 363 SNPAFL---ASKL---ARNPH--VKDVRGLGLII-GIEFDV--SATPVVDACRDSGLLVLTAGK------GNVVRLVPPL 425 (451)
Q Consensus 363 ~~~~~~---~~~~---~~~~~--~~~v~g~G~~~-~~~~~~--~~~~~~~~l~~~Gv~~~~~~~------~~~iri~~~~ 425 (451)
.++.+. +.+. +.++. ...+++.++++ ++.+.. ...++.+.|+++||++.+... .+.+||+|++
T Consensus 300 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~lRi~~~~ 379 (402)
T PRK07505 300 LSEELDQLQQKLQNNIALFDSLIPTEQSGSFLPIRLIYIGDEDTAIKAAKQLLDRGFYTSPVFFPVVAKGRAGLRIMFRA 379 (402)
T ss_pred hccCcHHHHHHHHHHHHHHHHHHHhcCCCCCCCEEEEEeCCHHHHHHHHHHHHHCCCeEeeecCCCCCCCCceEEEecCc
Confidence 443322 1111 11111 12235556554 333332 356799999999999987521 1589999999
Q ss_pred CCCHHHHHHHHHHHHHHHHH
Q 013008 426 IISEQELDQAVEILCKTLPV 445 (451)
Q Consensus 426 ~~t~e~i~~~l~~l~~~l~~ 445 (451)
.+|+||+++++++|++++++
T Consensus 380 ~~t~eei~~~~~~l~~~l~~ 399 (402)
T PRK07505 380 SHTNDEIKRLCSLLKEILDE 399 (402)
T ss_pred cCCHHHHHHHHHHHHHHHHh
Confidence 99999999999999998864
No 88
>PLN02822 serine palmitoyltransferase
Probab=100.00 E-value=2.2e-37 Score=316.06 Aligned_cols=329 Identities=20% Similarity=0.257 Sum_probs=250.7
Q ss_pred EEEeecccEEEecCCCEEEeeccCcccccCCC-CCHHHHHHHHHHHhhcccccC-----CCCCHHHHHHHHHHhhccC-C
Q 013008 83 VLASGKGCKLYDAEGREYLDLSSGIAVNALGH-GDADWIKAVVDQANVLTHVSN-----MYYSIPQIELAKRLVACSF-A 155 (451)
Q Consensus 83 ~~~~~~G~~l~d~~G~~~iD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~~~~-----~~~~~~~~~l~~~l~~~~~-~ 155 (451)
++.+++|.+++ .+|++||||.++++ +|. .||+|++|+.+++++++.++. +++++.+.+|+++|+++++ .
T Consensus 95 ~~~~~~G~~i~-~~G~~~id~~s~~~---lgl~~~~~i~ea~~~al~~~G~g~~g~r~~yg~~~~~~~Lee~La~~~~~~ 170 (481)
T PLN02822 95 VLESAAGPHTI-INGKDVVNFASANY---LGLIGNEKIKESCTSALEKYGVGSCGPRGFYGTIDVHLDCETKIAKFLGTP 170 (481)
T ss_pred ceecCCCCeEE-ECCceEEEeECCCc---CCCCCCHHHHHHHHHHHHHhCCCCcccCccccCHHHHHHHHHHHHHHhCCC
Confidence 67889999999 79999999999877 444 699999999999999765322 2355669999999999998 5
Q ss_pred CeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCH
Q 013008 156 DRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNI 235 (451)
Q Consensus 156 e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 235 (451)
+.++|++ |..++.+++++. ++ +.++|++++.||+....++.+++ ..+.++++||.
T Consensus 171 ~~i~~s~-G~~a~~sai~a~---~~---------~gd~Ii~d~~~H~s~~~~~~ls~------------~~~~~~~~nd~ 225 (481)
T PLN02822 171 DSILYSY-GLSTIFSVIPAF---CK---------KGDIIVADEGVHWGIQNGLYLSR------------STIVYFKHNDM 225 (481)
T ss_pred CEEEECC-HHHHHHHHHHHh---CC---------CCCEEEEeCCccHHHHHHHHHcC------------CeEEEECCCCH
Confidence 5666665 555788888844 32 44566688999988766655543 34567888999
Q ss_pred HHHHHhcC---C-----CCe-EEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEecccc--CCCccccccccccc
Q 013008 236 EATRKLIQ---P-----GKT-AAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQC--GLGRTGYLWAHEHY 304 (451)
Q Consensus 236 ~~le~~l~---~-----~~~-aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t--g~gr~G~~~~~~~~ 304 (451)
++++..++ . .++ ++|++|++++++|.+.+ |++|+++|++||++||+||+|+ .+|++|.+ ..+++
T Consensus 226 ~~l~~~l~~~~~~~~~~~~~~~~Ivve~i~~~~G~i~~----L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G-~~e~~ 300 (481)
T PLN02822 226 ESLRNTLEKLTAENKRKKKLRRYIVVEAIYQNSGQIAP----LDEIVRLKEKYRFRVLLDESNSFGVLGKSGRG-LSEHF 300 (481)
T ss_pred HHHHHHHHHHhhhhcccCCCcEEEEEecCCCCCCCccC----HHHHHHHHHHcCCEEEEECCccccccCCCCCC-hHHHc
Confidence 88887775 1 224 89999999999999887 9999999999999999999997 35666665 56888
Q ss_pred CC---Ccceee--ecccccCCcccccccccHHHHhhccCCCccCCCCCc--HHHHHHHHHHHHHhcC-hHHHHH------
Q 013008 305 GI---FPDIMT--LAKPLAGGLPIGAALVTEKVASAINYGDHGSTFAGS--PLVCNAAIAVLDKISN-PAFLAS------ 370 (451)
Q Consensus 305 ~~---~pdi~t--~sK~lg~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~--~~~~aaa~aal~~~~~-~~~~~~------ 370 (451)
++ .+|+++ |||++|. ..|++++++++++.++...++++|+++ |..++|++++|+.++. ++..++
T Consensus 301 ~v~~~~~dii~~s~sKalg~--~GG~i~g~~~ii~~~~~~~~~~~fsa~lPp~~~~Aa~~aL~~l~~~~~~~~~l~~~~~ 378 (481)
T PLN02822 301 GVPIEKIDIITAAMGHALAT--EGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEDNPSVLAKLKENIA 378 (481)
T ss_pred CCCCCCCeEEEecchhhhhh--CCeEEEcCHHHHHHHHhcCCceeeccccCHHHHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence 87 688876 8899973 228889999999998766777888876 8889999999988754 444433
Q ss_pred ----HHhCCCCccee-cccceeEEEEecCC----------hHHHHHHHH-HCCceeeecCC--------CCEEEEeCCCC
Q 013008 371 ----KLARNPHVKDV-RGLGLIIGIEFDVS----------ATPVVDACR-DSGLLVLTAGK--------GNVVRLVPPLI 426 (451)
Q Consensus 371 ----~~~~~~~~~~v-~g~G~~~~~~~~~~----------~~~~~~~l~-~~Gv~~~~~~~--------~~~iri~~~~~ 426 (451)
.+++.+.+... .+.+.++.+.++.. ..+++++|+ ++||++.+... +..+|++++..
T Consensus 379 ~l~~~L~~~~g~~~~~~~~spi~~l~l~~~~~~~~~~~~~~~~~~~~Ll~e~GV~v~~~~~~~~~~~~~~~~lRi~is~~ 458 (481)
T PLN02822 379 LLHKGLSDIPGLSIGSNTLSPIVFLHLEKSTGSAKEDLSLLEHIADRMLKEDSVLVVVSKRSTLDKCRLPVGIRLFVSAG 458 (481)
T ss_pred HHHHHHHhcCCcccCCCCCCCEEEEEeCCCcccccchHHHHHHHHHHHHhcCCEEEEeeCCCCcCCCCCCCcEEEEECCC
Confidence 12222222212 24566777777321 256899998 78999986521 23699999999
Q ss_pred CCHHHHHHHHHHHHHHHHHHh
Q 013008 427 ISEQELDQAVEILCKTLPVLD 447 (451)
Q Consensus 427 ~t~e~i~~~l~~l~~~l~~~~ 447 (451)
+|++||++++++|++++.++.
T Consensus 459 ~t~edI~~~~~~l~~~~~~~~ 479 (481)
T PLN02822 459 HTESDILKASESLKRVAASVL 479 (481)
T ss_pred CCHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999988764
No 89
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=100.00 E-value=1.7e-34 Score=290.94 Aligned_cols=318 Identities=17% Similarity=0.160 Sum_probs=243.0
Q ss_pred CCCEEEeeccCcccccCCC-CCHHHHHHHHHHHhhcccccC-----CCCCHHHHHHHHHHhhccCCCeEEecCCHHHHHH
Q 013008 96 EGREYLDLSSGIAVNALGH-GDADWIKAVVDQANVLTHVSN-----MYYSIPQIELAKRLVACSFADRVFFSNTGTEANE 169 (451)
Q Consensus 96 ~G~~~iD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~~~~-----~~~~~~~~~l~~~l~~~~~~e~v~~~~sG~eA~~ 169 (451)
+|+++|+|+++.| ||. +||+|++|+.++++++++++. .+.++.+.+|+++|+++++.+++++++||++||+
T Consensus 43 ~~~~~~~~~sn~y---lgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g~~~~~~~~SG~~An~ 119 (406)
T PRK13393 43 GPREVTVWCSNDY---LGMGQHPAVLAAMHEALDTCGAGAGGTRNISGTNHYHVLLEAELADLHGKEAALLFTSGYVSNW 119 (406)
T ss_pred CCccEEEeecccc---cCCCCCHHHHHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHhCCCcEEEeCCcHHHHH
Confidence 4689999999888 998 799999999999998765321 1234468999999999999899999999999999
Q ss_pred HHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcC---CCC
Q 013008 170 AAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQ---PGK 246 (451)
Q Consensus 170 ~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~---~~~ 246 (451)
.|++++... .++++|+++..||+++..++..++. .+..++++|++++++.++ +.+
T Consensus 120 ~ai~~l~~~----------~~g~~I~~~~~~H~s~~~~~~~~g~------------~~~~~~~~d~~~l~~~l~~~~~~~ 177 (406)
T PRK13393 120 AALSTLGSR----------LPGCVILSDELNHASMIEGIRHSRA------------EKRIFRHNDPADLERKLSDLDPHR 177 (406)
T ss_pred HHHHHhhcC----------CCCCEEEEccchhHHHHHHHHHcCC------------eEEEeCCCCHHHHHHHHHhccCCC
Confidence 999954321 1345889999999998776654321 234567789999998886 236
Q ss_pred eEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEecccc-CC-CcccccccccccCCC--ccee--eecccccCC
Q 013008 247 TAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQC-GL-GRTGYLWAHEHYGIF--PDIM--TLAKPLAGG 320 (451)
Q Consensus 247 ~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-g~-gr~G~~~~~~~~~~~--pdi~--t~sK~lg~G 320 (451)
+++|++|++++++|.+.+ +++|.++|++||+++|+||+|+ |+ |+.|.++ .++.++. +|++ +|||+++.
T Consensus 178 ~~~v~~~~v~~~~G~~~~----l~~i~~l~~~~~~~livDea~~~g~~g~~G~g~-~~~~~~~~~~~i~~~tlsKa~g~- 251 (406)
T PRK13393 178 PKLVAFESVYSMDGDIAP----IAEICDVAEKHGAMTYLDEVHAVGLYGPRGGGI-AEREGLADRLTIIEGTLAKAFGV- 251 (406)
T ss_pred CEEEEEcCCCCCCCchhC----HHHHHHHHHHcCCEEEEECCccccccCCCCCch-hhhcCCCCCCeEEEEeCchhhcc-
Confidence 789999999999999888 9999999999999999999996 65 7777654 3566654 5776 99999974
Q ss_pred cccccccccHHHHhhccCCCcc--CCCCCcHHHHHHHHHHHHHhcChHHH-HH-------H---HhCCCCcceeccccee
Q 013008 321 LPIGAALVTEKVASAINYGDHG--STFAGSPLVCNAAIAVLDKISNPAFL-AS-------K---LARNPHVKDVRGLGLI 387 (451)
Q Consensus 321 ~~iG~v~~~~~i~~~~~~~~~~--~t~~~~~~~~aaa~aal~~~~~~~~~-~~-------~---~~~~~~~~~v~g~G~~ 387 (451)
+.||+++++++++.+...... .+.+.+|.+++++.++|+.+++.... ++ + ++.. ....+++.|.+
T Consensus 252 -~GG~~~~~~~~~~~l~~~~~~~~~t~~~~p~~~aa~~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~i 329 (406)
T PRK13393 252 -MGGYITGSAALCDFIRSFASGFIFTTSLPPAVAAGALASVRHLKASSAERERHQDRVARLRARLDKA-GIPHLPNPSHI 329 (406)
T ss_pred -cCceeeCCHHHHHHHHHhCcCceecCccCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHc-CCCcCCCCCCe
Confidence 227888899998887654332 46677899999999999987543221 11 1 1222 22335677888
Q ss_pred EEEEecC--ChHHHHHHHHH-CCceeeecCC------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 013008 388 IGIEFDV--SATPVVDACRD-SGLLVLTAGK------GNVVRLVPPLIISEQELDQAVEILCKTLPVL 446 (451)
Q Consensus 388 ~~~~~~~--~~~~~~~~l~~-~Gv~~~~~~~------~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~ 446 (451)
+.+.+.. .+.++.+.|++ +||++.+... .+.+|++|++.+|++|+++++++|+++++++
T Consensus 330 ~~v~~~~~~~~~~l~~~L~~~~Gi~v~~~~~p~~p~g~~~iRis~~~~~t~edid~l~~~l~~~~~~~ 397 (406)
T PRK13393 330 VPVMVGDPVLCKQISDELLDRYGIYVQPINYPTVPRGTERLRITPSPLHTDADIEHLVQALSEIWARL 397 (406)
T ss_pred EEEEeCCHHHHHHHHHHHHHhCCEEEEeECCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHhc
Confidence 8776632 35678888987 5999875321 1679999999999999999999999988764
No 90
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=100.00 E-value=1e-33 Score=285.14 Aligned_cols=318 Identities=20% Similarity=0.206 Sum_probs=239.0
Q ss_pred CCCEEEeeccCcccccCCC-CCHHHHHHHHHHHhhcccccC-----CCCCHHHHHHHHHHhhccCCCeEEecCCHHHHHH
Q 013008 96 EGREYLDLSSGIAVNALGH-GDADWIKAVVDQANVLTHVSN-----MYYSIPQIELAKRLVACSFADRVFFSNTGTEANE 169 (451)
Q Consensus 96 ~G~~~iD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~~~~-----~~~~~~~~~l~~~l~~~~~~e~v~~~~sG~eA~~ 169 (451)
+|+++++|+|+.| ||. +||+|++|+.+++++++.++. .++++.+.+|+++|+++++.+.+++++||++||+
T Consensus 43 ~~~~~~~~~sn~y---lgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~Le~~la~~~g~~~~l~~~sG~~an~ 119 (402)
T TIGR01821 43 GAKDVTVWCSNDY---LGMGQHPEVLQAMHETLDKYGAGAGGTRNISGTNIPHVELEAELADLHGKESALVFTSGYVAND 119 (402)
T ss_pred CCeeEEEeEccCc---CCCCCCHHHHHHHHHHHHHcCCCCcchhhhhCCcHHHHHHHHHHHHHhCCCeEEEECchHHHHH
Confidence 4699999999988 887 699999999999998765322 1245668999999999999888999999999999
Q ss_pred HHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcC---CCC
Q 013008 170 AAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQ---PGK 246 (451)
Q Consensus 170 ~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~---~~~ 246 (451)
.+++++... .++.+++.+..||+.....+...+.+ +..++++|+++++++++ +++
T Consensus 120 ~ai~~l~~~----------~~~~~v~~~~~~h~s~~~~~~~~g~~------------~~~~~~~d~~~l~~~l~~~~~~~ 177 (402)
T TIGR01821 120 ATLATLAKI----------IPGCVIFSDELNHASMIEGIRHSGAE------------KFIFRHNDVAHLEKLLQSVDPNR 177 (402)
T ss_pred HHHHHhhCC----------CCCCEEEEcchHhHHHHHHHHHcCCe------------EEEECCCCHHHHHHHHHhccCCC
Confidence 999987632 13457788888998877665543321 22356678999998886 235
Q ss_pred eEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEecccc-C-CCcccccccccccCC--Cccee--eecccccCC
Q 013008 247 TAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQC-G-LGRTGYLWAHEHYGI--FPDIM--TLAKPLAGG 320 (451)
Q Consensus 247 ~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-g-~gr~G~~~~~~~~~~--~pdi~--t~sK~lg~G 320 (451)
+++|++|++++++|.+.+ +++|+++|++||++||+||+|+ | +|..|.+. .+++++ .+|++ ||||++++
T Consensus 178 ~~~v~~e~~~~~~G~~~~----l~~i~~l~~~~~~~livDea~~~G~~g~~g~g~-~~~~~~~~~~div~~t~sKa~g~- 251 (402)
T TIGR01821 178 PKIIAFESVYSMDGDIAP----IEEICDLADKYGALTYLDEVHAVGLYGPRGGGI-AERDGLMHRIDIIEGTLAKAFGV- 251 (402)
T ss_pred CeEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEeCcccccccCCCCCcc-chhccCCCCCeEEEEechhhhcc-
Confidence 789999999999998887 9999999999999999999997 4 34444432 345555 46776 99999974
Q ss_pred cccccccccHHHHhhccCCC--ccCCCCCcHHHHHHHHHHHHHhcChHHHH-H----------HHhCCCCcceeccccee
Q 013008 321 LPIGAALVTEKVASAINYGD--HGSTFAGSPLVCNAAIAVLDKISNPAFLA-S----------KLARNPHVKDVRGLGLI 387 (451)
Q Consensus 321 ~~iG~v~~~~~i~~~~~~~~--~~~t~~~~~~~~aaa~aal~~~~~~~~~~-~----------~~~~~~~~~~v~g~G~~ 387 (451)
..||+++++++++.+.... ...+.+.+|+++++++++|+.+++.+... + .++.+. +..+.+.|.+
T Consensus 252 -~GG~i~~~~~~~~~l~~~~~~~~~t~~~~~~~~aaa~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~i 329 (402)
T TIGR01821 252 -VGGYIAASRKLIDAIRSYAPGFIFTTSLPPAIAAGATASIRHLKESQDLRRAHQENVKRLKNLLEALG-IPVIPNPSHI 329 (402)
T ss_pred -CCceeecCHHHHHHHHHhCcCceecCcCCHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHcC-CCcCCCCCCE
Confidence 2278889999998875322 23456789999999999999876543222 1 122221 2223456777
Q ss_pred EEEEecC--ChHHHHHHHHH-CCceeeecCC------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 013008 388 IGIEFDV--SATPVVDACRD-SGLLVLTAGK------GNVVRLVPPLIISEQELDQAVEILCKTLPVL 446 (451)
Q Consensus 388 ~~~~~~~--~~~~~~~~l~~-~Gv~~~~~~~------~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~ 446 (451)
+.+.+.. .+.++.+.|++ +||++.+... .+.+|++|++.+|++|+++++++|+++++++
T Consensus 330 ~~i~~~~~~~a~~~~~~L~~~~Gi~v~~~~~p~~~~g~~~lRis~~~~~t~edi~~~~~~l~~~~~~~ 397 (402)
T TIGR01821 330 VPVIIGDAALCKKVSDLLLNKHGIYVQPINYPTVPRGTERLRITPTPAHTDKMIDDLVEALLLVWDRL 397 (402)
T ss_pred EEEEeCCHHHHHHHHHHHHhcCCEEEEeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHc
Confidence 7776632 35678888875 5999876421 2579999999999999999999999998765
No 91
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=100.00 E-value=4.3e-34 Score=278.45 Aligned_cols=321 Identities=20% Similarity=0.205 Sum_probs=248.3
Q ss_pred eecccEEEecCCCEEEeeccCcccccCCC-CCHHHHHHHHHHHhhcccccC-----CCCCHHHHHHHHHHhhccCCCeEE
Q 013008 86 SGKGCKLYDAEGREYLDLSSGIAVNALGH-GDADWIKAVVDQANVLTHVSN-----MYYSIPQIELAKRLVACSFADRVF 159 (451)
Q Consensus 86 ~~~G~~l~d~~G~~~iD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~~~~-----~~~~~~~~~l~~~l~~~~~~e~v~ 159 (451)
+..+..++ .+|++++||+||.| ||. +||++++++.+++++++.+.+ .++.+.+.+|+++|+++++.|.++
T Consensus 28 ~~~~~~~~-~~~~~~~nf~SNdY---LGLa~~~~~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~lA~f~g~e~al 103 (388)
T COG0156 28 RRQGLAIR-ADGRKVLNFCSNDY---LGLASHPELIEAAKAAIRRYGVGAGGSRLISGTSDLHVELEEELADFLGAEAAL 103 (388)
T ss_pred ccCCccee-cCCceeEeeeccCc---ccccCCHHHHHHHHHHHHHhCCCCCCcCcccCCcHHHHHHHHHHHHHhCCCcEE
Confidence 34455544 46999999999998 998 699999999999999654422 235667999999999999999999
Q ss_pred ecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHH
Q 013008 160 FSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATR 239 (451)
Q Consensus 160 ~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le 239 (451)
+++||..||.+++.++. .++.+|+.|-..|.+...+..++.. .+..+.|||+++||
T Consensus 104 ~f~SGy~AN~~~i~~l~------------~~~dli~~D~lnHASiidG~rls~a------------~~~~f~HnD~~~Le 159 (388)
T COG0156 104 LFSSGFVANLGLLSALL------------KKGDLIFSDELNHASIIDGIRLSRA------------EVRRFKHNDLDHLE 159 (388)
T ss_pred EEcccchhHHHHHHHhc------------CCCcEEEEechhhhhHHHHHHhCCC------------cEEEecCCCHHHHH
Confidence 99999999999999777 4678999999999998887776643 34557789999999
Q ss_pred HhcCC---C--CeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccc--cccccccCCCcc---
Q 013008 240 KLIQP---G--KTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGY--LWAHEHYGIFPD--- 309 (451)
Q Consensus 240 ~~l~~---~--~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~--~~~~~~~~~~pd--- 309 (451)
+.+++ . +...|++|.+++|.|.+.| |++|.+||++|+++|++||+|+ +|..|+ .+..+++|+.++
T Consensus 160 ~~l~~~~~~~~~~~~IvtegVfSMdGdiAp----L~~l~~L~~ky~a~L~VDEAHa-~Gv~G~~GrG~~e~~g~~~~~vd 234 (388)
T COG0156 160 ALLEEARENGARRKLIVTEGVFSMDGDIAP----LPELVELAEKYGALLYVDEAHA-VGVLGPNGRGLAEHFGLEPEEVD 234 (388)
T ss_pred HHHHhhhccCCCceEEEEeccccCCCCcCC----HHHHHHHHHHhCcEEEEEcccc-ccccCCCCccHHHHhCCCCccce
Confidence 99973 1 3689999999999999999 9999999999999999999994 544443 234667787643
Q ss_pred e--eeecccccC-CcccccccccHHHHhhccCC--CccCCCCCcHHHHHHHHHHHHHhcChHHHHH-HHhC---------
Q 013008 310 I--MTLAKPLAG-GLPIGAALVTEKVASAINYG--DHGSTFAGSPLVCNAAIAVLDKISNPAFLAS-KLAR--------- 374 (451)
Q Consensus 310 i--~t~sK~lg~-G~~iG~v~~~~~i~~~~~~~--~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~-~~~~--------- 374 (451)
| .||||+||+ | |++.+++.+.+.+... ...++.+.+|..++++.++|+.+++...... +.+.
T Consensus 235 i~~gTlsKAlGs~G---g~v~g~~~~~d~L~~~ar~~ifStalpP~~aaa~~~al~~l~~~~~~r~~L~~~~~~~~~~~~ 311 (388)
T COG0156 235 IIVGTLGKALGSSG---GYIAGSAALIDYLRNRARPFIFSTALPPAVAAAALAALRILEEGPERRERLQELAAFFRSLLK 311 (388)
T ss_pred EEEEEchhhhcccC---ceeeCcHHHHHHHHHhCCceeccCCCCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 3 389999984 5 8999999999998654 3345556789999999999999876544333 1111
Q ss_pred CCCcceecccceeEEEEec--CChHHHHHHHHHCCceeeecCC------CCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 013008 375 NPHVKDVRGLGLIIGIEFD--VSATPVVDACRDSGLLVLTAGK------GNVVRLVPPLIISEQELDQAVEILCKT 442 (451)
Q Consensus 375 ~~~~~~v~g~G~~~~~~~~--~~~~~~~~~l~~~Gv~~~~~~~------~~~iri~~~~~~t~e~i~~~l~~l~~~ 442 (451)
...+........+..+.+. ..+..+...|+++||++.+... -..+|+++++.||++||+.+++.|.++
T Consensus 312 ~~~~~~~~s~s~I~pv~~gd~~~a~~~s~~l~~~Gi~v~~i~~PTVp~gtarlRi~lta~ht~~~I~~l~~~l~~~ 387 (388)
T COG0156 312 ALGLVLLPSESPIIPVILGDEERALEASRALLEEGIYVSAIRPPTVPKGTARLRITLTAAHTEEDIDRLAEALSEV 387 (388)
T ss_pred hcCCccCCCCCCeeeeEeCCHHHHHHHHHHHHHCCeeEeeecCCCCCCCcceEEEEecCCCCHHHHHHHHHHHHhh
Confidence 1011112333445555552 3467788999999999875432 157999999999999999999998864
No 92
>PRK09064 5-aminolevulinate synthase; Validated
Probab=100.00 E-value=5.5e-33 Score=280.32 Aligned_cols=317 Identities=18% Similarity=0.192 Sum_probs=237.5
Q ss_pred CCEEEeeccCcccccCCCC-CHHHHHHHHHHHhhcccccC----C-CCCHHHHHHHHHHhhccCCCeEEecCCHHHHHHH
Q 013008 97 GREYLDLSSGIAVNALGHG-DADWIKAVVDQANVLTHVSN----M-YYSIPQIELAKRLVACSFADRVFFSNTGTEANEA 170 (451)
Q Consensus 97 G~~~iD~~~~~~~~~lG~~-~p~v~~a~~~~~~~~~~~~~----~-~~~~~~~~l~~~l~~~~~~e~v~~~~sG~eA~~~ 170 (451)
|++++||+|+.+ ||+. ||+|++|+.++++++++++. . ++++.+.+|+++|+++++.+..++++||++||+.
T Consensus 45 ~~~~~~~~s~dy---lgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~la~~~g~~~~~~~~sG~~an~~ 121 (407)
T PRK09064 45 EREVTVWCSNDY---LGMGQHPKVIEAMIEALDRCGAGAGGTRNISGTNHYHVELERELADLHGKEAALVFTSGYVSNDA 121 (407)
T ss_pred CceEEEEECCCC---cCCCCCHHHHHHHHHHHHHcCCCCCCcCcCccCHHHHHHHHHHHHHHhCCCcEEEECcHHHHHHH
Confidence 599999999887 9985 99999999999988654321 1 2456699999999999987888888999999999
Q ss_pred HHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcC---CCCe
Q 013008 171 AIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQ---PGKT 247 (451)
Q Consensus 171 al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~---~~~~ 247 (451)
+++++..+ .++.+++.+..+|+.....+...+. ....++++|+++|+++++ ++++
T Consensus 122 ai~~l~~~----------~~~~~i~~~~~~h~s~~~~~~~~~~------------~~~~~~~~d~~~le~~l~~~~~~~~ 179 (407)
T PRK09064 122 TLSTLAKL----------IPDCVIFSDELNHASMIEGIRRSRC------------EKHIFRHNDVAHLEELLAAADPDRP 179 (407)
T ss_pred HHHHHhCC----------CCCCEEEEeCcchHHHHHHHHHcCC------------cEEEECCCCHHHHHHHHHhccCCCC
Confidence 99987632 1345777776677766555443321 123456789999999886 2467
Q ss_pred EEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEecccc-C-CCcccccccccccCC--Cccee--eecccccCCc
Q 013008 248 AAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQC-G-LGRTGYLWAHEHYGI--FPDIM--TLAKPLAGGL 321 (451)
Q Consensus 248 aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-g-~gr~G~~~~~~~~~~--~pdi~--t~sK~lg~G~ 321 (451)
++|++|++++++|.+.+ +++|+++|++||++||+||+|+ | +|+.|.++ .++.++ .+|++ ||||++|.
T Consensus 180 ~~v~~~~v~s~~G~~~~----l~~i~~l~~~~~~~livDEa~~~G~~g~~g~g~-~~~~~~~~~~div~~t~sKa~g~-- 252 (407)
T PRK09064 180 KLIAFESVYSMDGDIAP----IAEICDLADKYNALTYLDEVHAVGMYGPRGGGI-AERDGLMDRIDIIEGTLAKAFGV-- 252 (407)
T ss_pred eEEEEeCCCCCCccccC----HHHHHHHHHHcCCEEEEECCCcccccCCCCCCh-HHhcCCCCCCeEEEEecchhhhc--
Confidence 89999999999998887 9999999999999999999997 6 57777654 455565 56877 99999973
Q ss_pred ccccccccHHHHhhccCCC--ccCCCCCcHHHHHHHHHHHHHhcChHHH-HH----------HHhCCCCcceecccceeE
Q 013008 322 PIGAALVTEKVASAINYGD--HGSTFAGSPLVCNAAIAVLDKISNPAFL-AS----------KLARNPHVKDVRGLGLII 388 (451)
Q Consensus 322 ~iG~v~~~~~i~~~~~~~~--~~~t~~~~~~~~aaa~aal~~~~~~~~~-~~----------~~~~~~~~~~v~g~G~~~ 388 (451)
..|++++++++++.+.... +..+.+.+|.++++++++++.++..+.. ++ .+++.. +..+.+.+.++
T Consensus 253 ~GG~~~~~~~~~~~l~~~~~~~~~t~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~iv 331 (407)
T PRK09064 253 MGGYIAGSAALVDAVRSYAPGFIFTTSLPPAIAAAALASIRHLKESNEERERHQERAAKLKAALDAAG-IPVMPNESHIV 331 (407)
T ss_pred cCceEecCHHHHHHHHHhCccccccCcCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcC-CCCCCCCCCEE
Confidence 2388889999888775322 2335677899999999999988654322 22 122222 22233456677
Q ss_pred EEEecC--ChHHHHHHHHH-CCceeeecCC------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 013008 389 GIEFDV--SATPVVDACRD-SGLLVLTAGK------GNVVRLVPPLIISEQELDQAVEILCKTLPVL 446 (451)
Q Consensus 389 ~~~~~~--~~~~~~~~l~~-~Gv~~~~~~~------~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~ 446 (451)
.+.+.. .+.++.+.|++ +||++.+... .+.+|++|++.+|++|+++++++|+++++++
T Consensus 332 ~i~~~~~~~~~~l~~~L~~~~gi~v~~~~~p~~~~~~~~lRis~~~~~t~edi~~l~~~l~~~~~~~ 398 (407)
T PRK09064 332 PVMVGDPEKCKKASDMLLEEHGIYVQPINYPTVPRGTERLRITPTPFHTDEMIDHLVEALVEVWARL 398 (407)
T ss_pred EEEeCCHHHHHHHHHHHHHhCCEEEeeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHc
Confidence 776632 35678888875 5999976421 1579999999999999999999999998765
No 93
>PLN02955 8-amino-7-oxononanoate synthase
Probab=100.00 E-value=3.3e-33 Score=278.21 Aligned_cols=333 Identities=16% Similarity=0.093 Sum_probs=243.3
Q ss_pred CCCEEEeeccCcccccCCC-CCHHHHHHHHHHHhhcccccC-----CCCCHHHHHHHHHHhhccCCCeEEecCCHHHHHH
Q 013008 96 EGREYLDLSSGIAVNALGH-GDADWIKAVVDQANVLTHVSN-----MYYSIPQIELAKRLVACSFADRVFFSNTGTEANE 169 (451)
Q Consensus 96 ~G~~~iD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~~~~-----~~~~~~~~~l~~~l~~~~~~e~v~~~~sG~eA~~ 169 (451)
.++++++|+|+.| ||. .||++++++.+++++++.++. .+++..+.+|+++|+++++.|.+++++||+.||.
T Consensus 100 ~~r~~l~FsSndY---LGL~~~p~v~~a~~~ai~~yG~g~~gSrl~~G~~~~h~~LE~~LA~f~g~e~all~sSGy~AN~ 176 (476)
T PLN02955 100 RFKKLLLFSGNDY---LGLSSHPTISNAAANAAKEYGMGPKGSALICGYTTYHRLLESSLADLKKKEDCLVCPTGFAANM 176 (476)
T ss_pred CCceEEEeeccCc---cCCCCCHHHHHHHHHHHHHcCCCCCCcCccccChHHHHHHHHHHHHHHCCCcEEEECChHHHHH
Confidence 4579999999888 887 699999999999999765422 2345668999999999999999999999999999
Q ss_pred HHHHHHHHHhhhc--CCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcC--CC
Q 013008 170 AAIKFARKFQRHS--NPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQ--PG 245 (451)
Q Consensus 170 ~al~~a~~~~~~~--~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~--~~ 245 (451)
+++.++....... .+....+++.+|+.|...|.+...++.++.... ...+..++|||+++|+++++ .+
T Consensus 177 ~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~~~~--------~a~~~~f~HND~~~Le~~L~~~~~ 248 (476)
T PLN02955 177 AAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVRLAERQG--------NVEVFVYRHCDMYHLNSLLSSCKM 248 (476)
T ss_pred HHHHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHHhccccC--------CceEEEeCCCCHHHHHHHHHhCCC
Confidence 9999763111000 000001355688999999999888776652210 12355678999999999996 34
Q ss_pred CeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccc--cccccccCCCcce----eeecccccC
Q 013008 246 KTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGY--LWAHEHYGIFPDI----MTLAKPLAG 319 (451)
Q Consensus 246 ~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~--~~~~~~~~~~pdi----~t~sK~lg~ 319 (451)
+.++|++|+++++.|.+.| |++|.++|++||++||+||+|+ +|+.|+ .+..+++++.+|+ .||||++|.
T Consensus 249 ~~~~Vv~EgV~SmdGdiap----L~eL~~L~~~~ga~LiVDEAH~-~Gv~G~~G~G~~e~~g~~~di~ii~~TLsKA~G~ 323 (476)
T PLN02955 249 KRKVVVTDSLFSMDGDFAP----MEELSQLRKKYGFLLVIDDAHG-TFVCGENGGGVAEEFNCEADVDLCVGTLSKAAGC 323 (476)
T ss_pred CceEEEEeCCCCCCCCcCC----HHHHHHHHHHcCcEEEEccccc-CceecCCCCcHHHHhCCCCCCcEEEEeCccchhc
Confidence 5689999999999999888 9999999999999999999996 444444 3456788887765 689999963
Q ss_pred CcccccccccHHHHhhccCCCccCCC--CCcHHHHHHHHHHHHHhcChHHH-HHHHhCCCCcce---ecccceeEEEEec
Q 013008 320 GLPIGAALVTEKVASAINYGDHGSTF--AGSPLVCNAAIAVLDKISNPAFL-ASKLARNPHVKD---VRGLGLIIGIEFD 393 (451)
Q Consensus 320 G~~iG~v~~~~~i~~~~~~~~~~~t~--~~~~~~~aaa~aal~~~~~~~~~-~~~~~~~~~~~~---v~g~G~~~~~~~~ 393 (451)
..|++++++++++.++.......| +.+|..+++++++++.+..+... ++++++...... ..-...++.+.+.
T Consensus 324 --~GGfi~gs~~~~~~l~~~~~~~ifStalpp~~aaa~laal~l~~~~~~~r~~L~~n~~~fr~~~G~~~~sPI~pI~ig 401 (476)
T PLN02955 324 --HGGFIACSKKWKQLIQSRGRSFIFSTAIPVPMAAAAYAAVVVARKEKWRRKAIWERVKEFKALSGVDISSPIISLVVG 401 (476)
T ss_pred --cCceeecHHHHHHHHHHhCCCCeecccccHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCCCCCCEEEEEeC
Confidence 347899999999988654333333 44567778888999988654433 223322111100 1112344555553
Q ss_pred --CChHHHHHHHHHCCceeeecCC------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 013008 394 --VSATPVVDACRDSGLLVLTAGK------GNVVRLVPPLIISEQELDQAVEILCKTLPVL 446 (451)
Q Consensus 394 --~~~~~~~~~l~~~Gv~~~~~~~------~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~ 446 (451)
..+..+.+.|+++|+++.+... ...+||+++..||+|||++++++|.++.+.+
T Consensus 402 ~~~~a~~~~~~L~~~Gi~v~~i~yPtVP~g~~rLRi~lsA~Ht~edId~lv~~L~~~~~~~ 462 (476)
T PLN02955 402 NQEKALKASRYLLKSGFHVMAIRPPTVPPNSCRLRVTLSAAHTTEDVKKLITALSSCLDFD 462 (476)
T ss_pred CHHHHHHHHHHHHHCCCEEEEECCCCCCCCCceEEEeeCCCCCHHHHHHHHHHHHHHHhhh
Confidence 3456789999999999885432 1469999999999999999999999887653
No 94
>PRK07179 hypothetical protein; Provisional
Probab=100.00 E-value=5e-31 Score=265.92 Aligned_cols=331 Identities=20% Similarity=0.243 Sum_probs=237.8
Q ss_pred hcccccCCCCceEEEeecccEEEecCCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccc---cCCC--CCHHHHHH
Q 013008 71 KLLVGTYNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHV---SNMY--YSIPQIEL 145 (451)
Q Consensus 71 ~~~~~~~~~~p~~~~~~~G~~l~d~~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~---~~~~--~~~~~~~l 145 (451)
......|.+.+++..+++|.+++|.+|+.||||. +||+|++++.+++++++.. +..+ ......+|
T Consensus 35 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~YL~l~----------~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~l 104 (407)
T PRK07179 35 ERVNKNWNGKHLVLGKTPGPDAIILQSNDYLNLS----------GHPDIIKAQIAALQEEGDSLVMSAVFLHDDSPKPQF 104 (407)
T ss_pred HhhccCcCCceEEeecCCCCcEEEeecCCccCCC----------CCHHHHHHHHHHHHHhCCCCCccccccCCchHHHHH
Confidence 3344557788999999999999999999999976 7899999999999875322 2222 23468899
Q ss_pred HHHHhhccCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCC
Q 013008 146 AKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMP 225 (451)
Q Consensus 146 ~~~l~~~~~~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~ 225 (451)
+++|+++++.+.+++++||++||+.+++++.. +++.|++. ...|..........+ .
T Consensus 105 e~~la~~~g~~~~~~~~sG~~An~~~l~~l~~-----------~g~~v~~~-~~~h~s~~~~~~~~g------------~ 160 (407)
T PRK07179 105 EKKLAAFTGFESCLLCQSGWAANVGLLQTIAD-----------PNTPVYID-FFAHMSLWEGVRAAG------------A 160 (407)
T ss_pred HHHHHHHhCCCcEEEECCHHHHHHHHHHHhCC-----------CCCEEEEE-CCcCHHHHHHHHHCC------------C
Confidence 99999999988899999999999999997652 46666664 444444332222211 1
Q ss_pred CeeEeeCCCHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccC--CCcccccccccc
Q 013008 226 GVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCG--LGRTGYLWAHEH 303 (451)
Q Consensus 226 ~~~~~~~~d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg--~gr~G~~~~~~~ 303 (451)
.+..++++|+++|++++++.++++|+++++++++|.+.+ +++|+++|++||++||+||+|+. +|++|.++ ...
T Consensus 161 ~~~~~~~~d~~~l~~~l~~~~~~lV~v~~v~n~tG~i~p----l~~I~~l~~~~~~~livDea~~~g~~g~~g~g~-~~~ 235 (407)
T PRK07179 161 QAHPFRHNDVDHLRRQIERHGPGIIVVDSVYSTTGTIAP----LADIVDIAEEFGCVLVVDESHSLGTHGPQGAGL-VAE 235 (407)
T ss_pred eEEEecCCCHHHHHHHHHhcCCeEEEECCCCCCCCcccc----HHHHHHHHHHcCCEEEEECcccccCcCCCCCch-HHh
Confidence 233455689999999997545789999999999998887 99999999999999999999973 34444432 345
Q ss_pred cCCC--ccee--eecccccCCcccccccccHHHHhhccCC----CccCCCCCcHHHHHHHHHHHHHhcChH-HHHH----
Q 013008 304 YGIF--PDIM--TLAKPLAGGLPIGAALVTEKVASAINYG----DHGSTFAGSPLVCNAAIAVLDKISNPA-FLAS---- 370 (451)
Q Consensus 304 ~~~~--pdi~--t~sK~lg~G~~iG~v~~~~~i~~~~~~~----~~~~t~~~~~~~~aaa~aal~~~~~~~-~~~~---- 370 (451)
+++. +|++ +++|++++ ++|++++++++++.+... .+++|+ ++..++++.++++.+...+ ..++
T Consensus 236 ~~~~~~vdi~~~S~sK~~g~--~~G~l~~~~~~~~~~~~~~~~~~~~~t~--~~~~~aa~~aal~~~~~~~~~~~~l~~~ 311 (407)
T PRK07179 236 LGLTSRVHFITASLAKAFAG--RAGIITCPRELAEYVPFVSYPAIFSSTL--LPHEIAGLEATLEVIESADDRRARLHAN 311 (407)
T ss_pred cCCCCCCCEEEeechHhhhc--cCeEEEeCHHHHHHHHHhCcCeeeCCCC--CHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 6653 4775 57899964 689999999988776422 222333 3555566667787765432 3222
Q ss_pred ------HHhCCCCcceecccceeEEEEecC--ChHHHHHHHHHCCceee----ecCC--CCEEEEeCCCCCCHHHHHHHH
Q 013008 371 ------KLARNPHVKDVRGLGLIIGIEFDV--SATPVVDACRDSGLLVL----TAGK--GNVVRLVPPLIISEQELDQAV 436 (451)
Q Consensus 371 ------~~~~~~~~~~v~g~G~~~~~~~~~--~~~~~~~~l~~~Gv~~~----~~~~--~~~iri~~~~~~t~e~i~~~l 436 (451)
.++.+. + .+.+.+.++++.+.. ....+.+.|.++||++. |... .+.+||+++..+|+||+++++
T Consensus 312 ~~~l~~~L~~~g-~-~v~~~~~i~~l~~~~~~~~~~~~~~L~~~GI~~~~~~~p~~~~~~~~lRis~~~~~t~edi~~~~ 389 (407)
T PRK07179 312 ARFLREGLSELG-Y-NIRSESQIIALETGSERNTEVLRDALEERNVFGAVFCAPATPKNRNLIRLSLNADLTASDLDRVL 389 (407)
T ss_pred HHHHHHHHHHcC-C-CCCCCCCEEEEEeCCHHHHHHHHHHHHHCCceEeeecCCCCCCCCceEEEEECCCCCHHHHHHHH
Confidence 122222 2 244667888887742 34668888999999743 3211 268999999999999999999
Q ss_pred HHHHHHHHHH
Q 013008 437 EILCKTLPVL 446 (451)
Q Consensus 437 ~~l~~~l~~~ 446 (451)
++|++++++.
T Consensus 390 ~~l~~~~~~~ 399 (407)
T PRK07179 390 EVCREARDEV 399 (407)
T ss_pred HHHHHHHHhh
Confidence 9999998764
No 95
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=100.00 E-value=3.5e-31 Score=264.64 Aligned_cols=314 Identities=16% Similarity=0.242 Sum_probs=231.8
Q ss_pred EeeccCcccccCCC-CCHHHHHHHHHHHhhcccccC-----CCCCHHHHHHHHHHhhccCCCeEEecCCHHHHHHHHHHH
Q 013008 101 LDLSSGIAVNALGH-GDADWIKAVVDQANVLTHVSN-----MYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKF 174 (451)
Q Consensus 101 iD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~~~~-----~~~~~~~~~l~~~l~~~~~~e~v~~~~sG~eA~~~al~~ 174 (451)
|||.++.+ ||. .||++++++.+++++++.++. ++....+.+|+++++++++.+..++++||+.|+..++..
T Consensus 1 ~~f~s~dy---Lgl~~~~~~~~~~~~a~~~~g~~~~~sr~~yg~~~~~~~LE~~lA~~~g~e~al~~~sG~~a~~~~i~~ 77 (392)
T PLN03227 1 LNFATHDF---LSTSSSPTLRQTALESLSHYGCGSCGPRGFYGTIDAHLELEQCMAEFLGTESAILYSDGASTTSSTVAA 77 (392)
T ss_pred CCCcCcCc---cCCCCCHHHHHHHHHHHHHhCCCCcccccccCChHHHHHHHHHHHHHhCCCcEEEecCcHHHHHHHHHH
Confidence 57888777 887 699999999999988653321 122445899999999999988899999999999988886
Q ss_pred HHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcC---C-------
Q 013008 175 ARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQ---P------- 244 (451)
Q Consensus 175 a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~---~------- 244 (451)
+. .++|.||+.++.|.. ....+.++. ..+..++++|++++++.++ .
T Consensus 78 l~-----------~~GD~Vl~~~~~h~s-~~~~~~l~~------------~~~~~~~~~d~~~l~~~~~~i~~~~~a~~~ 133 (392)
T PLN03227 78 FA-----------KRGDLLVVDRGVNEA-LLVGVSLSR------------ANVRWFRHNDMKDLRRVLEQVRAQDVALKR 133 (392)
T ss_pred hC-----------CCCCEEEEeccccHH-HHHHHHHcC------------CeEEEeCCCCHHHHHHHHHHhhhhcccccc
Confidence 43 168888888877644 333322221 2345567788777776542 1
Q ss_pred ---CCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEecccc--CCCcccccccccccCCCc----ceeeecc
Q 013008 245 ---GKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQC--GLGRTGYLWAHEHYGIFP----DIMTLAK 315 (451)
Q Consensus 245 ---~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t--g~gr~G~~~~~~~~~~~p----di~t~sK 315 (451)
.++.+|++||+++++|.+++ +++|+++|++||+++|+||+|+ .+|++|. ++.+++|+.| |++++|+
T Consensus 134 ~~~~~t~~vi~E~v~~~~G~i~~----l~~i~~l~~~~g~~livDe~~~~g~~g~~G~-g~~~~~g~~p~~~~Div~~sl 208 (392)
T PLN03227 134 KPTDQRRFLVVEGLYKNTGTLAP----LKELVALKEEFHYRLILDESFSFGTLGKSGR-GSLEHAGLKPMVHAEIVTFSL 208 (392)
T ss_pred ccCCCcEEEEEcCCcCCCCcccC----HHHHHHHHHHcCCEEEEECcccccccCCCCC-cHHHHcCCCCCCCceEEEeec
Confidence 24788999999999998887 9999999999999999999997 2344455 5788999988 9988764
Q ss_pred cccCCcccccccccHHHHhhccCCCccCCCCCc--HHHHHHHHHHHHH-hcChHHHHH-----------HH-hCCCCcce
Q 013008 316 PLAGGLPIGAALVTEKVASAINYGDHGSTFAGS--PLVCNAAIAVLDK-ISNPAFLAS-----------KL-ARNPHVKD 380 (451)
Q Consensus 316 ~lg~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~--~~~~aaa~aal~~-~~~~~~~~~-----------~~-~~~~~~~~ 380 (451)
+-+.|...|++++++++++.++...+..+|+++ |+.++|++++++. ++.++..++ +. ..+|.+.+
T Consensus 209 sk~~g~~gg~v~~~~~~~~~~~~~~~~~~~~~~~~p~~~~aa~~al~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~ 288 (392)
T PLN03227 209 ENAFGSVGGMTVGSEEVVDHQRLSGSGYCFSASAPPFLAKADATATAGELAGPQLLNRLHDSIANLYSTLTNSSHPYALK 288 (392)
T ss_pred hhhhhccCcEEecCHHHHHHHHHhCcCccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCccccc
Confidence 433345667888999998877655667788876 8788888877754 445555444 22 23455556
Q ss_pred ecc--------cceeEEEEecCC-----------hHHHHHHHHHCCceeeecC----------CCCEEEEeCCCCCCHHH
Q 013008 381 VRG--------LGLIIGIEFDVS-----------ATPVVDACRDSGLLVLTAG----------KGNVVRLVPPLIISEQE 431 (451)
Q Consensus 381 v~g--------~G~~~~~~~~~~-----------~~~~~~~l~~~Gv~~~~~~----------~~~~iri~~~~~~t~e~ 431 (451)
+|+ .|.++.+++... ...+++.|+++|+++.+.+ ++..+|++++..||+||
T Consensus 289 ~rg~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~~~~~~~~~~~~~~~P~~~iR~~~~~~~t~ee 368 (392)
T PLN03227 289 LRNRLVITSDPISPIIYLRLSDQEATRRTDETLILDQIAHHSLSEGVAVVSTGGHVKKFLQLVPPPCLRVVANASHTRED 368 (392)
T ss_pred cccccccCCCCCCCEEEEEeCCHHHhhhhhhhhHHHHHHHHHHHCCCEEEecccccCCcCCCCCCceEEEEecCCCCHHH
Confidence 665 355788888321 2478899999999886422 13568999999999999
Q ss_pred HHHHHHHHHHHHHHH
Q 013008 432 LDQAVEILCKTLPVL 446 (451)
Q Consensus 432 i~~~l~~l~~~l~~~ 446 (451)
|++++++|+++++++
T Consensus 369 i~~~~~~l~~~~~~~ 383 (392)
T PLN03227 369 IDKLLTVLGEAVEAI 383 (392)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999998775
No 96
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=100.00 E-value=1.6e-30 Score=260.46 Aligned_cols=330 Identities=22% Similarity=0.176 Sum_probs=236.9
Q ss_pred CCCCceEEEeecccEEEecCCCEEEeeccCcccccCCC-CCHHHHHHHHHHHhhcccccC-----CCCCHHHHHHHHHHh
Q 013008 77 YNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGH-GDADWIKAVVDQANVLTHVSN-----MYYSIPQIELAKRLV 150 (451)
Q Consensus 77 ~~~~p~~~~~~~G~~l~d~~G~~~iD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~~~~-----~~~~~~~~~l~~~l~ 150 (451)
|...| ++.+++|.++|+ +|++||||.++. ++|| ++|+|++++.++++++..... .+......+++++++
T Consensus 20 ~~~~~-~~~~~~g~~~~~-~g~~~id~~~~~---~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la 94 (385)
T PRK05958 20 YRSLR-PREGGAGRWLVV-DGRRMLNFASND---YLGLARHPRLIAAAQQAARRYGAGSGGSRLVTGNSPAHEALEEELA 94 (385)
T ss_pred Ccccc-ccccCCCceeEe-CCceEEEeeCCC---cccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHH
Confidence 33444 567999999997 999999999975 3887 789999999999987542211 123556889999999
Q ss_pred hccCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEe
Q 013008 151 ACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFV 230 (451)
Q Consensus 151 ~~~~~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (451)
++++.+.++++++|++++..+++.+. + +++.|++.++. |+.......+.+. .+..+
T Consensus 95 ~~~~~~~~i~~~~g~~~~~~~l~~~~---~--------~gd~V~~~~~~-~~~~~~~~~~~g~------------~~~~~ 150 (385)
T PRK05958 95 EWFGAERALLFSSGYAANLAVLTALA---G--------KGDLIVSDKLN-HASLIDGARLSRA------------RVRRY 150 (385)
T ss_pred HHhCCCcEEEECcHHHHHHHHHHHhC---C--------CCCEEEEeCcc-CHHHHHHHHhcCC------------ceEEe
Confidence 99987777888899999988777442 2 57888877665 5554444333321 23345
Q ss_pred eCCCHHHHHHhcCCC--CeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEecccc-C-CCccccccccccc--
Q 013008 231 EYGNIEATRKLIQPG--KTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQC-G-LGRTGYLWAHEHY-- 304 (451)
Q Consensus 231 ~~~d~~~le~~l~~~--~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-g-~gr~G~~~~~~~~-- 304 (451)
+.+|+++++++++.. ++++++++++++++|...+ +++|+++|++||++||+||+|+ | +++.|..+ ....
T Consensus 151 ~~~d~~~l~~~i~~~~~~~~lvi~~~~~~~~G~~~~----l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~-~~~~~~ 225 (385)
T PRK05958 151 PHNDVDALEALLAKWRAGRALIVTESVFSMDGDLAP----LAELVALARRHGAWLLVDEAHGTGVLGPQGRGL-AAEAGL 225 (385)
T ss_pred CCCCHHHHHHHHHhccCCCeEEEEEecccCCCCcCC----HHHHHHHHHHhCCEEEEECcccccccCCCCCch-HHhhCC
Confidence 567899999999742 5788999999888887666 9999999999999999999995 3 34444332 2212
Q ss_pred CCCcc---eeeecccccCCcccccccccHHHHhhccCC--CccCCCCCcHHHHHHHHHHHHHhcCh-HHHHH--------
Q 013008 305 GIFPD---IMTLAKPLAGGLPIGAALVTEKVASAINYG--DHGSTFAGSPLVCNAAIAVLDKISNP-AFLAS-------- 370 (451)
Q Consensus 305 ~~~pd---i~t~sK~lg~G~~iG~v~~~~~i~~~~~~~--~~~~t~~~~~~~~aaa~aal~~~~~~-~~~~~-------- 370 (451)
...+| +.++||++++ +.|++++++++++.+... .+..+.+.+++.++++.++|+.+++. ...++
T Consensus 226 ~~~~~~i~~~s~sK~~~~--~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~l 303 (385)
T PRK05958 226 AGEPDVILVGTLGKALGS--SGAAVLGSETLIDYLINRARPFIFTTALPPAQAAAARAALRILRREPERRERLAALIARL 303 (385)
T ss_pred CCCCceEEEEechhhccc--CCcEEEcCHHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 22455 5689999974 348888999988876432 23334557888888888999876543 33333
Q ss_pred --HHhCCCCcceecccceeEEEEecC--ChHHHHHHHHHCCceeeecCC------CCEEEEeCCCCCCHHHHHHHHHHHH
Q 013008 371 --KLARNPHVKDVRGLGLIIGIEFDV--SATPVVDACRDSGLLVLTAGK------GNVVRLVPPLIISEQELDQAVEILC 440 (451)
Q Consensus 371 --~~~~~~~~~~v~g~G~~~~~~~~~--~~~~~~~~l~~~Gv~~~~~~~------~~~iri~~~~~~t~e~i~~~l~~l~ 440 (451)
.++..+ +..+.+.|.++++.++. ...++.+.|.++||.+.+... .+++|++++..++++++++++++|+
T Consensus 304 ~~~L~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gI~v~~~~~~~~~~~~~~lRis~~~~~~~~~i~~~l~~l~ 382 (385)
T PRK05958 304 RAGLRALG-FQLMDSQSAIQPLIVGDNERALALAAALQEQGFWVGAIRPPTVPAGTSRLRITLTAAHTEADIDRLLEALA 382 (385)
T ss_pred HHHHHHcC-CCcCCCCCCEEEEEeCCHHHHHHHHHHHHHCCceEecccCCCCCCCCceEEEEecCCCCHHHHHHHHHHHH
Confidence 112222 22345678888888742 456799999999999976321 2689999999999999999999998
Q ss_pred HHH
Q 013008 441 KTL 443 (451)
Q Consensus 441 ~~l 443 (451)
+++
T Consensus 383 ~~~ 385 (385)
T PRK05958 383 EAL 385 (385)
T ss_pred hcC
Confidence 753
No 97
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=100.00 E-value=4.6e-30 Score=258.02 Aligned_cols=335 Identities=20% Similarity=0.213 Sum_probs=237.6
Q ss_pred CCCceEEEeecccEEEecCCCEEEeeccCcccccCCCC-CHHHHHHHHHHHhhcccc--cCC---CCCHHHHHHHHHHhh
Q 013008 78 NRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHG-DADWIKAVVDQANVLTHV--SNM---YYSIPQIELAKRLVA 151 (451)
Q Consensus 78 ~~~p~~~~~~~G~~l~d~~G~~~iD~~~~~~~~~lG~~-~p~v~~a~~~~~~~~~~~--~~~---~~~~~~~~l~~~l~~ 151 (451)
.+.|..+.+++|.++++.+|++||||.++.+ ||++ +|++++++.+++++.+.+ +.. +..+.+.+|++.+++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~~---lg~~~~~~v~~~~~~~~~~~~~~~~~s~~~~G~~~~~~~le~~ia~ 94 (393)
T TIGR01822 18 FKSERIITSPQGADIRVADGREVLNFCANNY---LGLSSHPDLIQAAKDALDEHGFGMSSVRFICGTQDIHKELEAKIAA 94 (393)
T ss_pred CCcccccccCCCceEEecCCceEEEeeCCCc---cccCCCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHH
Confidence 3567788899999999989999999999965 7885 899999999999875322 111 124457899999999
Q ss_pred ccCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEee
Q 013008 152 CSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVE 231 (451)
Q Consensus 152 ~~~~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (451)
+++.+.+++++||++|+..++.++. .++|.|++.++.|+..... +.+.+.. ...++
T Consensus 95 ~~g~~~~ii~~~~~~a~~~~~~~l~-----------~~gd~vi~~~~~~~s~~~~-~~~~~~~------------~~~~~ 150 (393)
T TIGR01822 95 FLGTEDTILYASCFDANGGLFETLL-----------GAEDAIISDALNHASIIDG-VRLCKAK------------RYRYA 150 (393)
T ss_pred HhCCCcEEEECchHHHHHHHHHHhC-----------CCCCEEEEeccccHHHHHH-HHhcCCc------------eEEeC
Confidence 9998888888999999998887653 1688899988877654332 2222111 12234
Q ss_pred CCCHHHHHHhcCC---C--CeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEecccc-CC-Cccccccccccc
Q 013008 232 YGNIEATRKLIQP---G--KTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQC-GL-GRTGYLWAHEHY 304 (451)
Q Consensus 232 ~~d~~~le~~l~~---~--~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-g~-gr~G~~~~~~~~ 304 (451)
++|+++|++.+.+ . ++++|+++++++++|.+.+ +++|+++|++||++||+||+|. |+ +..|.. ..+..
T Consensus 151 ~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~tG~~~~----l~~i~~la~~~~~~li~De~~~~g~~~~~~~~-~~~~~ 225 (393)
T TIGR01822 151 NNDMADLEAQLKEARAAGARHRLIATDGVFSMDGVIAP----LDEICDLADKYDALVMVDECHATGFLGPTGRG-SHELC 225 (393)
T ss_pred CCCHHHHHHHHHhhhhcCCCceEEEEeCCccCCCCcCC----HHHHHHHHHHcCCEEEEECCccccCcCCCCCc-hHHhc
Confidence 5799999998863 2 6788999999999898776 9999999999999999999994 32 223322 22233
Q ss_pred CC--Cccee--eecccccCCcccccccccHHHHhhccCCCccCCCC--CcHHHHHHHHHHHHHhcC-hHHHHH-------
Q 013008 305 GI--FPDIM--TLAKPLAGGLPIGAALVTEKVASAINYGDHGSTFA--GSPLVCNAAIAVLDKISN-PAFLAS------- 370 (451)
Q Consensus 305 ~~--~pdi~--t~sK~lg~G~~iG~v~~~~~i~~~~~~~~~~~t~~--~~~~~~aaa~aal~~~~~-~~~~~~------- 370 (451)
++ .+|++ ++||+++| +++||+++++++++.+........++ .++..++++.++++.++. ++..++
T Consensus 226 ~~~~~~di~~~s~sK~l~g-~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~ 304 (393)
T TIGR01822 226 GVMGRVDIITGTLGKALGG-ASGGFTTARKEVVELLRQRSRPYLFSNSLPPAVVGASIKVLEMLEASNELRDRLWANTRY 304 (393)
T ss_pred CCCCCCeEEEEEChHHhhC-CCcEEEEeCHHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 43 35666 78999874 68999999999998875432222333 356667778888877643 222222
Q ss_pred H---HhCCCCcceecccceeEEEEec--CChHHHHHHHHHCCceeeecC-----C-CCEEEEeCCCCCCHHHHHHHHHHH
Q 013008 371 K---LARNPHVKDVRGLGLIIGIEFD--VSATPVVDACRDSGLLVLTAG-----K-GNVVRLVPPLIISEQELDQAVEIL 439 (451)
Q Consensus 371 ~---~~~~~~~~~v~g~G~~~~~~~~--~~~~~~~~~l~~~Gv~~~~~~-----~-~~~iri~~~~~~t~e~i~~~l~~l 439 (451)
+ ++.. .+....+.+.++.+.+. ....++++.|+++||++.... . ...+|+++++.+|++||++++++|
T Consensus 305 l~~~L~~~-g~~~~~~~~~~~~i~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~iRis~~~~~t~edi~~~~~~l 383 (393)
T TIGR01822 305 FRERMEAA-GFDIKPADHPIIPVMLYDAVLAQRFARRLLEEGIYVTGFFYPVVPKGQARIRVQISAAHTEEQLDRAVEAF 383 (393)
T ss_pred HHHHHHHc-CCCCCCCCCCEEEEEeCCHHHHHHHHHHHHHCCeeEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHH
Confidence 1 1222 12212234555555552 235779999999999886321 1 146899999999999999999999
Q ss_pred HHHHHHH
Q 013008 440 CKTLPVL 446 (451)
Q Consensus 440 ~~~l~~~ 446 (451)
.++++++
T Consensus 384 ~~~~~~~ 390 (393)
T TIGR01822 384 TRIGREL 390 (393)
T ss_pred HHHHHHh
Confidence 9988764
No 98
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=100.00 E-value=7.8e-30 Score=256.63 Aligned_cols=333 Identities=18% Similarity=0.200 Sum_probs=234.6
Q ss_pred CceEEEeecccEEEecCCCEEEeeccCcccccCCC-CCHHHHHHHHHHHhhcccccC-----CCCCHHHHHHHHHHhhcc
Q 013008 80 APVVLASGKGCKLYDAEGREYLDLSSGIAVNALGH-GDADWIKAVVDQANVLTHVSN-----MYYSIPQIELAKRLVACS 153 (451)
Q Consensus 80 ~p~~~~~~~G~~l~d~~G~~~iD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~~~~-----~~~~~~~~~l~~~l~~~~ 153 (451)
.+..+++++|.++||.+|++||||+++.+ +|+ .+|++.+++.+++++..+.+. .+..+.+.++++++++++
T Consensus 24 ~~~~~~~~~~~~~~~~~g~~~i~l~~~~~---~~~~~~~~i~~a~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~la~~~ 100 (397)
T PRK06939 24 EERVITSPQGADITVADGKEVINFCANNY---LGLANHPELIAAAKAALDSHGFGMASVRFICGTQDLHKELEEKLAKFL 100 (397)
T ss_pred ccccccCCCCceEEecCCCeEEEeeccCc---cccCCCHHHHHHHHHHHHHcCCCCcccccccCCcHHHHHHHHHHHHHh
Confidence 34577899999999999999999998754 788 689999999999877543221 123455789999999998
Q ss_pred CCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCC
Q 013008 154 FADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYG 233 (451)
Q Consensus 154 ~~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (451)
+.++.+++++|++|+..+++++. +++|.||+.+|.|++..... ...+ ..+..++++
T Consensus 101 g~~~~i~~tsG~~a~~~~~~~l~-----------~~gd~vi~~~~~~~~~~~~~-~~~~------------~~~~~~~~~ 156 (397)
T PRK06939 101 GTEDAILYSSCFDANGGLFETLL-----------GKEDAIISDALNHASIIDGV-RLCK------------AKRYRYANN 156 (397)
T ss_pred CCCcEEEEcChHHHHHHHHHHhC-----------CCCCEEEEEhhhhHHHHHHH-HhcC------------CceEEeCCC
Confidence 85555566667999999887654 26899999999887654332 2211 122334556
Q ss_pred CHHHHHHhcCC---C--CeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEecccc-CC-CcccccccccccCC
Q 013008 234 NIEATRKLIQP---G--KTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQC-GL-GRTGYLWAHEHYGI 306 (451)
Q Consensus 234 d~~~le~~l~~---~--~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-g~-gr~G~~~~~~~~~~ 306 (451)
|++++++.++. . ++++|++++++++.|...+ +++|.++|++||++||+||+|. |+ +..|.. ....+++
T Consensus 157 d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~~G~~~~----~~~l~~la~~~~~~li~De~~~~g~~~~~~~~-~~~~~~~ 231 (397)
T PRK06939 157 DMADLEAQLKEAKEAGARHKLIATDGVFSMDGDIAP----LPEICDLADKYDALVMVDDSHAVGFVGENGRG-TVEHFGV 231 (397)
T ss_pred CHHHHHHHHHhhhccCCCCeEEEEecCcCCCCCcCC----HHHHHHHHHHhCCEEEEECcccccCcCCCCCC-HHHHcCC
Confidence 89999888852 2 5788888889888887555 9999999999999999999995 32 333321 2233444
Q ss_pred --Cccee--eecccccCCcccccccccHHHHhhccCCCccCCC--CCcHHHHHHHHHHHHHhcC-hHHHHH---------
Q 013008 307 --FPDIM--TLAKPLAGGLPIGAALVTEKVASAINYGDHGSTF--AGSPLVCNAAIAVLDKISN-PAFLAS--------- 370 (451)
Q Consensus 307 --~pdi~--t~sK~lg~G~~iG~v~~~~~i~~~~~~~~~~~t~--~~~~~~~aaa~aal~~~~~-~~~~~~--------- 370 (451)
.+|++ ++||+++| +++||+++++++++.+........+ +.++..++++.++++.+.. ++..++
T Consensus 232 ~~~~~i~~~S~sK~~~g-~r~G~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~ 310 (397)
T PRK06939 232 MDRVDIITGTLGKALGG-ASGGYTAGRKEVIDWLRQRSRPYLFSNSLAPAIVAASIKVLELLEESDELRDRLWENARYFR 310 (397)
T ss_pred CCCCcEEEEECHHHhCc-cCceEEEeCHHHHHHHHHhCccccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 35666 89999964 5899999999999887643222222 2356667778888877643 222222
Q ss_pred -HHhCCCCcceecccceeEEEEec--CChHHHHHHHHHCCceeeecC-----C-CCEEEEeCCCCCCHHHHHHHHHHHHH
Q 013008 371 -KLARNPHVKDVRGLGLIIGIEFD--VSATPVVDACRDSGLLVLTAG-----K-GNVVRLVPPLIISEQELDQAVEILCK 441 (451)
Q Consensus 371 -~~~~~~~~~~v~g~G~~~~~~~~--~~~~~~~~~l~~~Gv~~~~~~-----~-~~~iri~~~~~~t~e~i~~~l~~l~~ 441 (451)
.++.+. +....+.+.++.+.+. .+..++++.|+++||.+.+.. . .+.+|+++++.++++++++++++|.+
T Consensus 311 ~~L~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~l~~L~~ 389 (397)
T PRK06939 311 EGMTAAG-FTLGPGEHPIIPVMLGDAKLAQEFADRLLEEGVYVIGFSFPVVPKGQARIRTQMSAAHTKEQLDRAIDAFEK 389 (397)
T ss_pred HHHHHcC-CCcCCCCCCEEEEEECCHHHHHHHHHHHHHCCceEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHH
Confidence 122222 2223355666655553 245779999999999887531 1 25799999998999999999999999
Q ss_pred HHHHH
Q 013008 442 TLPVL 446 (451)
Q Consensus 442 ~l~~~ 446 (451)
+++++
T Consensus 390 ~~~~~ 394 (397)
T PRK06939 390 VGKEL 394 (397)
T ss_pred HHHHh
Confidence 88764
No 99
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.98 E-value=6.8e-30 Score=256.08 Aligned_cols=332 Identities=17% Similarity=0.177 Sum_probs=232.8
Q ss_pred CCceEEEeecccEEEecCCCEEEeeccCcccccCCC-CCHHHHHHHHHHHhhccccc-----CCCCCHHHHHHHHHHhhc
Q 013008 79 RAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGH-GDADWIKAVVDQANVLTHVS-----NMYYSIPQIELAKRLVAC 152 (451)
Q Consensus 79 ~~p~~~~~~~G~~l~d~~G~~~iD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~~~-----~~~~~~~~~~l~~~l~~~ 152 (451)
..|.++.+++|.+|| .+|++||||.++.+ +|| ++|.+++++.+++++..... ..+..+.+.++++++++.
T Consensus 15 ~~~~~~~~~~g~~~~-~~g~~~id~~~~~~---~g~~~~~~~~~a~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~~ 90 (385)
T TIGR01825 15 ISIRVLESAQGPRVR-VNGKEVINLSSNNY---LGFADHPRLKEAAAQAIQQYGVGAGAVRTIAGTLRLHEELEEKLAKF 90 (385)
T ss_pred ccccccccCCCceEE-ECCceEEEeeccCc---cCCCCCHHHHHHHHHHHHHcCCCCCccCcccCCcHHHHHHHHHHHHH
Confidence 468899999999999 99999999988633 799 89999999999988643321 122345688999999998
Q ss_pred cCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeC
Q 013008 153 SFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEY 232 (451)
Q Consensus 153 ~~~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (451)
++.+..+++++|++|+..+++++. .+++.|++.++.| +.....+...+.. ...++.
T Consensus 91 ~g~~~~i~~~sG~~a~~~a~~~~~-----------~~gd~vi~~~~~~-~~~~~~~~~~g~~------------~~~~~~ 146 (385)
T TIGR01825 91 KKTEAALVFQSGFNTNQGVLSALL-----------RKGDIVLSDELNH-ASIIDGLRLTKAT------------KKIYKH 146 (385)
T ss_pred hCCCcEEEECcHHHHHHHHHHHhC-----------CCCCEEEEEcccc-HHHHHHHHhcCCc------------eEEeCC
Confidence 886666777788999998888654 1577777666654 4444333332211 122344
Q ss_pred CCHHHHHHhcCC---CCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccC--CCcccccccccccCCC
Q 013008 233 GNIEATRKLIQP---GKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCG--LGRTGYLWAHEHYGIF 307 (451)
Q Consensus 233 ~d~~~le~~l~~---~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg--~gr~G~~~~~~~~~~~ 307 (451)
.|++++++.+.. .++++|+++++++++|.+.+ +++|.++|++||+++|+||+|+. +++.|.. ...++++.
T Consensus 147 ~d~~~l~~~l~~~~~~~~~~v~~~~v~~~tG~~~~----~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~-~~~~~~~~ 221 (385)
T TIGR01825 147 ADMDDLDRVLRENPSYGKKLIVTDGVFSMDGDVAP----LPEIVELAERYGAVTYVDDAHGSGVMGEAGRG-TVHHFGLE 221 (385)
T ss_pred CCHHHHHHHHHhhccCCCeEEEEecCCcCCCCccC----HHHHHHHHHHhCCEEEEECcccccCcCCCCCc-cHhhcCCC
Confidence 588888887762 35789999999998888776 89999999999999999999963 3444432 22334443
Q ss_pred cc----eeeecccccCCcccccccccHHHHhhccCCCccC--CCCCcHHHHHHHHHHHHHhcC-hHHHHH-------H--
Q 013008 308 PD----IMTLAKPLAGGLPIGAALVTEKVASAINYGDHGS--TFAGSPLVCNAAIAVLDKISN-PAFLAS-------K-- 371 (451)
Q Consensus 308 pd----i~t~sK~lg~G~~iG~v~~~~~i~~~~~~~~~~~--t~~~~~~~~aaa~aal~~~~~-~~~~~~-------~-- 371 (451)
+| +.+|||++++ +.||+++++++++.+....... +...+|+.++++.++++.+.+ .+..++ +
T Consensus 222 ~~~~i~~~s~sK~~~~--~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~ 299 (385)
T TIGR01825 222 DKVDIQVGTLSKAIGV--VGGYAAGHKELIEYLKNRARPFLFSTAQPPAVVAALAAAVDELQRSPELMERLWDNTRFFKA 299 (385)
T ss_pred cCCcEEEEeccHHhhc--CCCEEecCHHHHHHHHHhCccccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 43 4689999963 4588889999988875432211 223567888888888886643 233333 1
Q ss_pred -HhCCCCcceecccceeEEEEecC--ChHHHHHHHHHCCceeeecCC------CCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 013008 372 -LARNPHVKDVRGLGLIIGIEFDV--SATPVVDACRDSGLLVLTAGK------GNVVRLVPPLIISEQELDQAVEILCKT 442 (451)
Q Consensus 372 -~~~~~~~~~v~g~G~~~~~~~~~--~~~~~~~~l~~~Gv~~~~~~~------~~~iri~~~~~~t~e~i~~~l~~l~~~ 442 (451)
++.. .+....+.+.++++.+.. ...++++.|+++||++.+... ...+|++|++.+++|++++++++|+++
T Consensus 300 ~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~e~i~~~~~~l~~~ 378 (385)
T TIGR01825 300 GLGKL-GYDTGGSETPITPVVIGDEKAAQEFSRRLFDEGIFAQSIVFPTVPRGTARIRNIPTAEHTKDDLDQALDAYEKV 378 (385)
T ss_pred HHHHc-CCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCcEEcccCCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 1122 122223444555555532 356799999999998853211 157999999999999999999999999
Q ss_pred HHHH
Q 013008 443 LPVL 446 (451)
Q Consensus 443 l~~~ 446 (451)
++++
T Consensus 379 ~~~~ 382 (385)
T TIGR01825 379 GKEL 382 (385)
T ss_pred HHHh
Confidence 8764
No 100
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.97 E-value=2.8e-29 Score=253.46 Aligned_cols=318 Identities=19% Similarity=0.205 Sum_probs=227.8
Q ss_pred CCCEEEeeccCcccccCCC-CCHHHHHHHHHHHhhccccc----CCC-CCHHHHHHHHHHhhccCCCeEEecCCHHHHHH
Q 013008 96 EGREYLDLSSGIAVNALGH-GDADWIKAVVDQANVLTHVS----NMY-YSIPQIELAKRLVACSFADRVFFSNTGTEANE 169 (451)
Q Consensus 96 ~G~~~iD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~~~----~~~-~~~~~~~l~~~l~~~~~~e~v~~~~sG~eA~~ 169 (451)
+|+++++|.++.+ +|. +||++++|+.+++++++.++ ..+ ..+.+.+|+++|+++++.+..++++||++|+.
T Consensus 44 ~~~~~~~~~sn~y---l~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~Le~~la~~~g~~~~i~~~sG~~a~~ 120 (410)
T PRK13392 44 GPRRVTIWCSNDY---LGMGQHPDVIGAMVDALDRYGAGAGGTRNISGTSHPHVLLERELADLHGKESALLFTSGYVSND 120 (410)
T ss_pred CCceEEEEECCCc---cCCCCCHHHHHHHHHHHHHcCCCCchhhhcccChHHHHHHHHHHHHHhCCCCEEEECcHHHHHH
Confidence 5789999999877 666 69999999999998865431 112 33458899999999999778888889999999
Q ss_pred HHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcC---CCC
Q 013008 170 AAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQ---PGK 246 (451)
Q Consensus 170 ~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~---~~~ 246 (451)
.+++.+.... +++ +|+.+..+|+.....+...+. .+..++++|.+.+++.++ .++
T Consensus 121 ~~i~~l~~~~---------~g~-~vi~~~~~h~s~~~~~~~~g~------------~~~~~~~~d~~~l~~~l~~~~~~~ 178 (410)
T PRK13392 121 AALSTLGKLL---------PGC-VILSDALNHASMIEGIRRSGA------------EKQVFRHNDLADLEEQLASVDPDR 178 (410)
T ss_pred HHHHHHhcCC---------CCC-EEEEehhhhHHHHHHHHHcCC------------eEEEEeCCCHHHHHHHHHhccCCC
Confidence 9998554210 344 566677788877555444332 123345678888887775 346
Q ss_pred eEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEecccc-C-CCcccccccccccCC--Cccee--eecccccCC
Q 013008 247 TAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQC-G-LGRTGYLWAHEHYGI--FPDIM--TLAKPLAGG 320 (451)
Q Consensus 247 ~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-g-~gr~G~~~~~~~~~~--~pdi~--t~sK~lg~G 320 (451)
+++|+++++++++|.+.+ +++|.++|++||+++|+||+|+ | +|..|.+. .++.++ .+|++ +|||++|.
T Consensus 179 t~~v~i~~~~n~tG~~~~----l~~i~~l~~~~~~~livDea~~~g~~g~~g~g~-~~~~~~~~~~div~~tlsK~~g~- 252 (410)
T PRK13392 179 PKLIAFESVYSMDGDIAP----IEAICDLADRYNALTYVDEVHAVGLYGARGGGI-AERDGLMDRIDMIQGTLAKAFGC- 252 (410)
T ss_pred CEEEEEeCCCCCCccccc----HHHHHHHHHHcCCEEEEECCccccCcCCCCCch-hhhccCCCCCcEEEEEChHhhhc-
Confidence 789999999999998877 9999999999999999999997 4 35555443 344444 45766 89999974
Q ss_pred cccccccccHHHHhhccCCCc--cCCCCCcHHHHHHHHHHHHHhcChHHHHH--------H---HhCCCCcceeccccee
Q 013008 321 LPIGAALVTEKVASAINYGDH--GSTFAGSPLVCNAAIAVLDKISNPAFLAS--------K---LARNPHVKDVRGLGLI 387 (451)
Q Consensus 321 ~~iG~v~~~~~i~~~~~~~~~--~~t~~~~~~~~aaa~aal~~~~~~~~~~~--------~---~~~~~~~~~v~g~G~~ 387 (451)
+.||+++++++++.++.... ..+.+.+|+.++++.++|+.++......+ + ++.. .+...++.+.+
T Consensus 253 -~GG~~~~~~~~~~~l~~~~~~~~~s~~~~~~~~~a~~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~ 330 (410)
T PRK13392 253 -LGGYIAASADLIDFVRSFAPGFIFTTALPPAVAAGATAAIRHLKTSQTERDAHQDRVAALKAKLNAN-GIPVMPSPSHI 330 (410)
T ss_pred -ccchhhcCHHHHHHHHHhCcchhccCcCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-CCCCCCCCCCE
Confidence 33888889999887654322 23555678889999999987654322111 1 1222 22223455666
Q ss_pred EEEEecC--ChHHHHHHHH-HCCceeeecCC------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 013008 388 IGIEFDV--SATPVVDACR-DSGLLVLTAGK------GNVVRLVPPLIISEQELDQAVEILCKTLPVL 446 (451)
Q Consensus 388 ~~~~~~~--~~~~~~~~l~-~~Gv~~~~~~~------~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~ 446 (451)
+.+.+.. ...++++.|+ ++||++.+... ...+|+++++.+|++|+++++++|+++++++
T Consensus 331 ~~i~~~~~~~~~~~~~~L~~~~GI~v~~~~~p~~~~~~~~lRis~~~~~t~edid~l~~aL~~~~~~~ 398 (410)
T PRK13392 331 VPVMVGDPTLCKAISDRLMSEHGIYIQPINYPTVPRGTERLRITPTPLHDDEDIDALVAALVAIWDRL 398 (410)
T ss_pred EEEEeCCHHHHHHHHHHHHHhCCEEEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHc
Confidence 6555532 3457888887 57999986421 1579999999999999999999999988754
No 101
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.97 E-value=2.5e-29 Score=226.44 Aligned_cols=327 Identities=19% Similarity=0.227 Sum_probs=238.6
Q ss_pred ceEEEeecccEEEecCC--CEEEeeccCcccccCCC-CCHHHHHHHHHHHhhcccccC-----CCCCHHHHHHHHHHhhc
Q 013008 81 PVVLASGKGCKLYDAEG--REYLDLSSGIAVNALGH-GDADWIKAVVDQANVLTHVSN-----MYYSIPQIELAKRLVAC 152 (451)
Q Consensus 81 p~~~~~~~G~~l~d~~G--~~~iD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~~~~-----~~~~~~~~~l~~~l~~~ 152 (451)
..++++.+|..+. ++| +.+|.|+.|.| ||. +||+|.+|-.+++++++.+.. .++...+..|+.+|+++
T Consensus 49 erVi~s~q~p~i~-v~G~~k~ilnFcaNnY---LGLsshPeii~a~~~aleeyGaGlssvrfIcGtq~iHk~LE~kiAqf 124 (417)
T KOG1359|consen 49 ERVITSRQGPTIQ-VKGSDKKILNFCANNY---LGLSSHPEIINAGQKALEEYGAGLSSVRFICGTQDIHKLLESKIAQF 124 (417)
T ss_pred eeEEeecccceEE-Eeccccceeeeccccc---ccccCChHHHHHHHHHHHHhCCCccceeEEecchHHHHHHHHHHHHH
Confidence 4567788998876 455 68999999888 998 799999999999999765522 13556699999999999
Q ss_pred cCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeC
Q 013008 153 SFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEY 232 (451)
Q Consensus 153 ~~~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (451)
.+.|+.++++|+..||..++.++.. ...-|+.|...|.+.+..+.+... ++ +
T Consensus 125 h~rED~ilypscfdANag~feail~------------pedAvfSDeLNhASIIdGirLckr--y~--------------h 176 (417)
T KOG1359|consen 125 HGREDTILYPSCFDANAGAFEAILT------------PEDAVFSDELNHASIIDGIRLCKR--YR--------------H 176 (417)
T ss_pred hCCCceEEeccccccchHHHHHhcC------------hhhhhhccccccchhhhhhHHHhh--hc--------------c
Confidence 9999999999999999999997762 334566677889988877766531 11 1
Q ss_pred CCHHHHHHhcC---CCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccc-cC-CCcccccccccccCC-
Q 013008 233 GNIEATRKLIQ---PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQ-CG-LGRTGYLWAHEHYGI- 306 (451)
Q Consensus 233 ~d~~~le~~l~---~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~-tg-~gr~G~~~~~~~~~~- 306 (451)
-|+..++..+. +.+...|..+.++++.|.+.| |++|.+|++|||+++.+||.| || ||.+|.+ .-+.+|+
T Consensus 177 ~dv~~l~~~l~~a~k~r~klv~TDg~FSMDGdiaP----l~ei~~La~kYgaLlfiDecHaTgf~G~tGrG-t~E~~~vm 251 (417)
T KOG1359|consen 177 VDVFDLEHCLISACKMRLKLVVTDGVFSMDGDIAP----LEEISQLAKKYGALLFIDECHATGFFGETGRG-TAEEFGVM 251 (417)
T ss_pred chhHHHHHHHHHhhhheEEEEEecceeccCCCccc----HHHHHHHHHhcCcEEEEeecccceeecCCCCC-hHHHhCCC
Confidence 15666665554 457889999999999999999 999999999999999999998 55 4666654 4567776
Q ss_pred -Cccee--eecccccCCcccccccccHHHHhhccCCCccCCCC--CcHHHHHHHHHHHHHhc-ChHHHHH---HHhCCC-
Q 013008 307 -FPDIM--TLAKPLAGGLPIGAALVTEKVASAINYGDHGSTFA--GSPLVCNAAIAVLDKIS-NPAFLAS---KLARNP- 376 (451)
Q Consensus 307 -~pdi~--t~sK~lg~G~~iG~v~~~~~i~~~~~~~~~~~t~~--~~~~~~aaa~aal~~~~-~~~~~~~---~~~~~~- 376 (451)
.+|++ |+||++|| ...||..+++++++.+++....+-|+ .+|.....+.++++.+- ......+ ..+++.
T Consensus 252 ~~vdiinsTLgKAlGg-a~GGyttgp~~li~llrqr~RpylFSnslppavV~~a~ka~dllm~s~~~i~~~~a~~qrfr~ 330 (417)
T KOG1359|consen 252 GDVDIINSTLGKALGG-ASGGYTTGPKPLISLLRQRSRPYLFSNSLPPAVVGMAAKAYDLLMVSSKEIQSRQANTQRFRE 330 (417)
T ss_pred CcceehhhhhhhhhcC-CCCCCccCChhHHHHHHhcCCceeecCCCChhhhhhhHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 56665 89999985 24489999999999988765555554 34555556666676542 2222222 111111
Q ss_pred -----Ccceeccc-ceeEEEEe-c-CChHHHHHHHHHCCceeeec-------CCCCEEEEeCCCCCCHHHHHHHHHHHHH
Q 013008 377 -----HVKDVRGL-GLIIGIEF-D-VSATPVVDACRDSGLLVLTA-------GKGNVVRLVPPLIISEQELDQAVEILCK 441 (451)
Q Consensus 377 -----~~~~v~g~-G~~~~~~~-~-~~~~~~~~~l~~~Gv~~~~~-------~~~~~iri~~~~~~t~e~i~~~l~~l~~ 441 (451)
.+. +.+. -.+..+.+ + ..+.++.+.|+++|+++... +. ..+|+.++.+||+||||++++++.+
T Consensus 331 ~me~aGft-Isg~~hPI~pv~lGda~lA~~~ad~lLk~Gi~Vigfs~PvVP~gk-ariRVqiSAaHt~edid~~i~Af~~ 408 (417)
T KOG1359|consen 331 FMEAAGFT-ISGASHPICPVMLGDARLASKMADELLKRGIYVIGFSYPVVPKGK-ARIRVQISAAHTEEDIDRLIEAFSE 408 (417)
T ss_pred HHHhcCce-ecCCCCCccceecccHHHHHHHHHHHHhcCceEEeecCCcCCCCc-eEEEEEEehhcCHHHHHHHHHHHHH
Confidence 110 1111 12233333 1 34678899999999998633 33 5799999999999999999999999
Q ss_pred HHHHHh
Q 013008 442 TLPVLD 447 (451)
Q Consensus 442 ~l~~~~ 447 (451)
+.+...
T Consensus 409 vgr~~~ 414 (417)
T KOG1359|consen 409 VGRFLN 414 (417)
T ss_pred HHHhhc
Confidence 887543
No 102
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.97 E-value=1.1e-28 Score=245.28 Aligned_cols=325 Identities=19% Similarity=0.162 Sum_probs=229.5
Q ss_pred CEEEeeccCcccccCCCCCHHHHHHHHHHHhhcc-cc-cCCCCCHHHHHHHHHHhhccC----CCe-EEecCCHHHHHHH
Q 013008 98 REYLDLSSGIAVNALGHGDADWIKAVVDQANVLT-HV-SNMYYSIPQIELAKRLVACSF----ADR-VFFSNTGTEANEA 170 (451)
Q Consensus 98 ~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~-~~-~~~~~~~~~~~l~~~l~~~~~----~e~-v~~~~sG~eA~~~ 170 (451)
.++||+..|.+. + ..++.+.+++.+++.... ++ ...+..+.++.+++++.+.++ .+. |++|+|+++|+..
T Consensus 28 ~~vi~l~iG~Pd--~-~~p~~i~~a~~~a~~~~~~~Y~~~~G~~~LReaia~~~~~~~~~~~~~~~eiivt~Ga~~al~~ 104 (393)
T COG0436 28 EDVIDLSIGEPD--F-PTPEHIIEAAIEALEEGGTHYTPSAGIPELREAIAEKYKRRYGLDVDPEEEIIVTAGAKEALFL 104 (393)
T ss_pred CCEEEeCCCCCC--C-CCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCCHHHHHHH
Confidence 468888877662 2 367889999999988753 22 222333446777777777755 444 9999999999999
Q ss_pred HHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCC-eeEeeCCCHHHHHHhcCCCCeEE
Q 013008 171 AIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPG-VNFVEYGNIEATRKLIQPGKTAA 249 (451)
Q Consensus 171 al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~le~~l~~~~~aa 249 (451)
++.+.. +++|.||+++|.|..+.......++..... ++... ..+. .|+++|++.+.+ ++++
T Consensus 105 ~~~a~~-----------~pGDeVlip~P~Y~~y~~~~~~~gg~~v~v----~l~~~~~~f~--~d~~~l~~~i~~-ktk~ 166 (393)
T COG0436 105 AFLALL-----------NPGDEVLIPDPGYPSYEAAVKLAGGKPVPV----PLDEEENGFK--PDLEDLEAAITP-KTKA 166 (393)
T ss_pred HHHHhc-----------CCCCEEEEeCCCCcCHHHHHHhcCCEEEEE----eCCcCccCCc--CCHHHHHhhcCc-cceE
Confidence 999777 379999999999988876665555543321 11111 0111 289999999987 5666
Q ss_pred EEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccc-ccc-ccccC---CCcceeeecccccC-Cccc
Q 013008 250 VFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGY-LWA-HEHYG---IFPDIMTLAKPLAG-GLPI 323 (451)
Q Consensus 250 vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~-~~~-~~~~~---~~pdi~t~sK~lg~-G~~i 323 (451)
|+++..++++|. ++++++|++|+++|++||++||+||+|.+|.+.|. ... .+..+ ....+-+|||.++. |||+
T Consensus 167 i~ln~P~NPTGa-v~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~~mtGwRv 245 (393)
T COG0436 167 IILNSPNNPTGA-VYSKEELKAIVELAREHDIIIISDEIYEELVYDGAEHPSILELAGARDRTITINSFSKTYGMTGWRI 245 (393)
T ss_pred EEEeCCCCCcCc-CCCHHHHHHHHHHHHHcCeEEEEehhhhhcccCCCCcCCHhhcCCCcceEEEEecccccccccccce
Confidence 666554445554 67999999999999999999999999999977773 221 22222 12334479999995 9999
Q ss_pred cccccc-HHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHH--------HHH------HHhCCCCcceec-ccce-
Q 013008 324 GAALVT-EKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAF--------LAS------KLARNPHVKDVR-GLGL- 386 (451)
Q Consensus 324 G~v~~~-~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~--------~~~------~~~~~~~~~~v~-g~G~- 386 (451)
||++++ +++++.+.......+++.+.++|.|+.++|+.-...++ .++ .+.+.+.+.... +.|.
T Consensus 246 G~~v~~~~~l~~~~~~~~~~~~~~~~~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~rrd~l~~~l~~~~g~~~~~~p~Ga~ 325 (393)
T COG0436 246 GWVVGPPEELIAALRKLKSYLTSCAPTPAQYAAIAALNGPQSDEVVEEMREEYRERRDLLVEALNEIGGLSVVKPPEGAF 325 (393)
T ss_pred eEeecChHHHHHHHHHHHHhcccCCCHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccCCCeeE
Confidence 999999 88888876555566778999999999999985322112 222 233444344444 4454
Q ss_pred eEEEEec--CChHHHHHHHHHC-CceeeecCC-C-----CEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 013008 387 IIGIEFD--VSATPVVDACRDS-GLLVLTAGK-G-----NVVRLVPPLIISEQELDQAVEILCKTLPVL 446 (451)
Q Consensus 387 ~~~~~~~--~~~~~~~~~l~~~-Gv~~~~~~~-~-----~~iri~~~~~~t~e~i~~~l~~l~~~l~~~ 446 (451)
+++..+. .+..+|+.+|+++ ||.+.|+.. + +++|+ +++.+++++++++++|.+.++..
T Consensus 326 Y~~~~i~~~~d~~~f~~~Ll~~~gV~v~PG~~Fg~~~g~~~vRi--s~~~~~~~l~~a~~rl~~~~~~~ 392 (393)
T COG0436 326 YLFPKIPELLDSEEFAKKLLEEAGVAVVPGSGFGEPPGEGYVRL--SLATSEETLEEALRRLARFLAEY 392 (393)
T ss_pred EEEeecCCCCCHHHHHHHHHHhCCEEEecccccCCCCCCCeEEE--EEecCHHHHHHHHHHHHHHHHhc
Confidence 4555554 4678999999865 899998732 1 46777 67778899999999999988754
No 103
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.97 E-value=3.3e-28 Score=241.39 Aligned_cols=321 Identities=20% Similarity=0.177 Sum_probs=225.4
Q ss_pred EEeecccEEEecCCCEEEeeccCcccccCCC-CCHHHHHHHHHHHhhcccccC-----CCCCHHHHHHHHHHhhccCCCe
Q 013008 84 LASGKGCKLYDAEGREYLDLSSGIAVNALGH-GDADWIKAVVDQANVLTHVSN-----MYYSIPQIELAKRLVACSFADR 157 (451)
Q Consensus 84 ~~~~~G~~l~d~~G~~~iD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~~~~-----~~~~~~~~~l~~~l~~~~~~e~ 157 (451)
+.++.|.++. .+|++||||.+|. ++|+ .||++++++.++++++..... ....+...++++.++++++.+.
T Consensus 3 ~~~~~~~~~~-~~g~~~id~~~~~---~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~~~ 78 (360)
T TIGR00858 3 LDRGPGPEVV-RDGRRLLNFSSND---YLGLASHPEVIQAAQQGAEQYGAGSTASRLVSGNSPLHEELEEELAEWKGTEA 78 (360)
T ss_pred cccCCCCeEE-ECCceEEecccCC---cccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhCCCC
Confidence 3578999997 7999999999983 5896 789999999999987443211 1223557889999999988666
Q ss_pred EEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHH
Q 013008 158 VFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEA 237 (451)
Q Consensus 158 v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 237 (451)
.+++++|++++..+++++. + +++.|++.++.|.... ......+ ..+..++..|+++
T Consensus 79 ~i~~~~G~~~~~~~l~~~~---~--------~gd~v~~~~~~~~~~~-~~~~~~g------------~~~~~~~~~d~~~ 134 (360)
T TIGR00858 79 ALLFSSGYLANVGVISALV---G--------KGDLILSDALNHASLI-DGCRLSG------------ARVRRYRHNDVEH 134 (360)
T ss_pred EEEECchHHHHHHHHHHhC---C--------CCCEEEEEccccHHHH-HHHHhcC------------CceEEecCCCHHH
Confidence 6666778899888777543 1 5788888887765443 3322222 1233445568999
Q ss_pred HHHhcCC---CCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccc--cccccccCCCcc---
Q 013008 238 TRKLIQP---GKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGY--LWAHEHYGIFPD--- 309 (451)
Q Consensus 238 le~~l~~---~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~--~~~~~~~~~~pd--- 309 (451)
|++.++. .++++|+++++++++|...+ +++|.++|++||+++|+||+|+ +|..+. ......+++.++
T Consensus 135 l~~~~~~~~~~~~~~v~~~~~~~~~G~~~~----~~~i~~l~~~~~~~li~De~~~-~~~~~~~~~~~~~~~~~~~~~~~ 209 (360)
T TIGR00858 135 LERLLEKNRGERRKLIVTDGVFSMDGDIAP----LPQLVALAERYGAWLMVDDAHG-TGVLGEDGRGTLEHFGLKPEPVD 209 (360)
T ss_pred HHHHHHHcccCCCeEEEEeCCccCCCCCcC----HHHHHHHHHHcCcEEEEECccc-ccCcCCCCCchHHhcCCCccCCc
Confidence 9999863 24788899998888887666 9999999999999999999996 333321 112333445444
Q ss_pred --eeeecccccCCcccccccccHHHHhhccCCC--ccCCCCCcHHHHHHHHHHHHHhcCh-HHHHH----------HHhC
Q 013008 310 --IMTLAKPLAGGLPIGAALVTEKVASAINYGD--HGSTFAGSPLVCNAAIAVLDKISNP-AFLAS----------KLAR 374 (451)
Q Consensus 310 --i~t~sK~lg~G~~iG~v~~~~~i~~~~~~~~--~~~t~~~~~~~~aaa~aal~~~~~~-~~~~~----------~~~~ 374 (451)
+.++||++++ +.||+++++++++.+.... +..+.+.++..++++.++++.++.. ...++ .+++
T Consensus 210 i~i~s~sK~~~~--~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~ 287 (360)
T TIGR00858 210 IQVGTLSKALGS--YGAYVAGSQALIDYLINRARTLIFSTALPPAVAAAALAALELIQEEPWRREKLLALIARLRAGLEA 287 (360)
T ss_pred EEEEechhhhhc--cCcEEEcCHHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHH
Confidence 5689999975 3489999999888775322 2223345677788888888866432 22222 2233
Q ss_pred CCCcceecccceeEEEEecC--ChHHHHHHHHHCCceeeecC------CCCEEEEeCCCCCCHHHHHHHHHHHH
Q 013008 375 NPHVKDVRGLGLIIGIEFDV--SATPVVDACRDSGLLVLTAG------KGNVVRLVPPLIISEQELDQAVEILC 440 (451)
Q Consensus 375 ~~~~~~v~g~G~~~~~~~~~--~~~~~~~~l~~~Gv~~~~~~------~~~~iri~~~~~~t~e~i~~~l~~l~ 440 (451)
++ +......|.++++.+.. +..++.+.|.++||++.+.. .++.+|++++..++++++++++++|+
T Consensus 288 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gI~v~~~~~~~~~~~~~~iRis~~~~~~~~~i~~~l~~l~ 360 (360)
T TIGR00858 288 LG-FTLMPSCTPIVPVIIGDNASALALAEELQQQGIFVGAIRPPTVPAGTSRLRLTLSAAHTPGDIDRLAEALK 360 (360)
T ss_pred cC-CccCCCCCCEEEEEeCCHHHHHHHHHHHHHCCeeEeeeCCCCCCCCCceEEEEEcCCCCHHHHHHHHHhhC
Confidence 33 22234567788888742 35689999999999997531 12589999999999999999999874
No 104
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.96 E-value=9.2e-28 Score=239.01 Aligned_cols=315 Identities=17% Similarity=0.165 Sum_probs=220.3
Q ss_pred CEEEeeccCcccccCCC-CCHHHHHHHHHHHhhcc-------cccCC-----CCCHHHHHHHHHHhhccCCCeEEecCCH
Q 013008 98 REYLDLSSGIAVNALGH-GDADWIKAVVDQANVLT-------HVSNM-----YYSIPQIELAKRLVACSFADRVFFSNTG 164 (451)
Q Consensus 98 ~~~iD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~-------~~~~~-----~~~~~~~~l~~~l~~~~~~e~v~~~~sG 164 (451)
.+++||.|+.| ||+ .+|++.+++.+++.++. .+..+ ..+..+.+++++|+++++.+.+++++||
T Consensus 4 ~~~~~~~s~~Y---L~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~~~~~l~~~sG 80 (370)
T PRK05937 4 SLSIDFVTNDF---LGFSRSDTLVHEVEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHGAPEAFIVPSG 80 (370)
T ss_pred CceEEeECCCc---cCCCCCHHHHHHHHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhCCCeEEEECCh
Confidence 46899999888 998 58999999999988752 22111 1345689999999999998888999999
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCC
Q 013008 165 TEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQP 244 (451)
Q Consensus 165 ~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~ 244 (451)
+.|+...+.... +++++|+.++.+|++...++..... ....++++|+++|+++++.
T Consensus 81 ~~a~~~~~~~~~------------~~~d~ii~d~~~H~sv~~~~~~~~~------------~~~~~~~~d~~~l~~~l~~ 136 (370)
T PRK05937 81 YMANLGLCAHLS------------SVTDYVLWDEQVHISVVYSLSVISG------------WHQSFRHNDLDHLESLLES 136 (370)
T ss_pred HHHHHHHHHHhC------------CCCCEEEEEhhhhHHHHHHHHHcCC------------ceEEecCCCHHHHHHHHHh
Confidence 999875444321 2557999999999998777654211 1123467899999999862
Q ss_pred -----CCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEecccc-C-CCcccccccccccC---CCcceeeec
Q 013008 245 -----GKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQC-G-LGRTGYLWAHEHYG---IFPDIMTLA 314 (451)
Q Consensus 245 -----~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-g-~gr~G~~~~~~~~~---~~pdi~t~s 314 (451)
++..+|+++++++++|.+.| +++|.++|+++|+++|+||+|+ | +|..|.++. ..++ ..+|+.|||
T Consensus 137 ~~~~~~~~~~v~v~~v~s~~G~i~p----l~eI~~l~~~~~~~livDea~~~G~~g~~g~g~~-~~~~~~~~~~~~~tls 211 (370)
T PRK05937 137 CRQRSFGRIFIFVCSVYSFKGTLAP----LEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFC-HSLGYENFYAVLVTYS 211 (370)
T ss_pred hhccCCCcEEEEEecCCCCCCCccC----HHHHHHHHHHcCCEEEEECCccccccCCCCCchH-HhhCCCCCcEEEEech
Confidence 34567889999999999888 9999999999999999999997 4 556654322 1222 236788999
Q ss_pred ccccC-CcccccccccHHHHhhccC--CCccCCCCCcHHHHHHHHHHHHHhcChH--HHHH---HHhCCC-Ccceecccc
Q 013008 315 KPLAG-GLPIGAALVTEKVASAINY--GDHGSTFAGSPLVCNAAIAVLDKISNPA--FLAS---KLARNP-HVKDVRGLG 385 (451)
Q Consensus 315 K~lg~-G~~iG~v~~~~~i~~~~~~--~~~~~t~~~~~~~~aaa~aal~~~~~~~--~~~~---~~~~~~-~~~~v~g~G 385 (451)
|++|+ | +.+++.+++.+.+.. .....+.+.+|+.++++.++++.+.+.. ..++ +.+.+. .+. ..+.+
T Consensus 212 K~~g~~G---~~vl~~~~~~~~~~~~~~~~~~s~~~~~~~~~a~~aal~~l~~~~~~~~~~l~~l~~~l~~~l~-~~~~~ 287 (370)
T PRK05937 212 KALGSMG---AALLSSSEVKQDLMLNSPPLRYSTGLPPHLLISIQVAYDFLSQEGELARKQLFRLKEYFAQKFS-SAAPG 287 (370)
T ss_pred hhhhcCc---eEEEcCHHHHHHHHHhCCCCeecCCCCHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcC-CCCCC
Confidence 99975 4 445566665554431 2233444568888888888998875432 2222 111111 011 11223
Q ss_pred eeEEEEec-CChHHHHHHHHHCCceeeecC--CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHhh
Q 013008 386 LIIGIEFD-VSATPVVDACRDSGLLVLTAG--KGNVVRLVPPLIISEQELDQAVEILCKTLPVLDS 448 (451)
Q Consensus 386 ~~~~~~~~-~~~~~~~~~l~~~Gv~~~~~~--~~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~~~ 448 (451)
....+.+. .....+.+.|.++||++.... ....+|++++..+|+||++++++.|+++++++..
T Consensus 288 ~~~~i~~~~~~~~~~~~~L~~~gi~v~~~~~~~~~~iRis~~~~~t~edid~l~~~L~~~~~~~~~ 353 (370)
T PRK05937 288 CVQPIFLPGISEQELYSKLVETGIRVGVVCFPTGPFLRVNLHAFNTEDEVDILVSVLATYLEKYQK 353 (370)
T ss_pred CEEEEEeCChhHHHHHHHHHHCCeeEEeeCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHhCC
Confidence 33334443 345678888889999887432 1357999999999999999999999999987653
No 105
>PLN02483 serine palmitoyltransferase
Probab=99.96 E-value=3.8e-27 Score=241.27 Aligned_cols=317 Identities=17% Similarity=0.164 Sum_probs=223.9
Q ss_pred cCCCEEEeeccCcccccCCCC--CHHHHHHHHHHHhhcccc--cC---CCCCHHHHHHHHHHhhccCCCeEEecCCHHHH
Q 013008 95 AEGREYLDLSSGIAVNALGHG--DADWIKAVVDQANVLTHV--SN---MYYSIPQIELAKRLVACSFADRVFFSNTGTEA 167 (451)
Q Consensus 95 ~~G~~~iD~~~~~~~~~lG~~--~p~v~~a~~~~~~~~~~~--~~---~~~~~~~~~l~~~l~~~~~~e~v~~~~sG~eA 167 (451)
.+++++|+|.|+.+ ||.. +|.+.+++.+++++++.+ +. .+.+..+.+|+++++++++.+..+++++|+.+
T Consensus 97 ~~~~~~~n~~s~~Y---Lgl~~~~~~~~~~~~~ai~~~g~~~~~sr~~~g~~~~~~ele~~lA~~~g~~~ai~~~~G~~a 173 (489)
T PLN02483 97 TKTRRCLNLGSYNY---LGFAAADEYCTPRVIESLKKYSASTCSSRVDGGTTKLHRELEELVARFVGKPAAIVFGMGYAT 173 (489)
T ss_pred CCCceEEEeecCCc---cCcCCCCHHHHHHHHHHHHHhCCCCCccccccCCcHHHHHHHHHHHHHhCCCcEEEECCHHHH
Confidence 35789999999887 8874 677888888888876542 11 23466799999999999997777777889999
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCC---
Q 013008 168 NEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQP--- 244 (451)
Q Consensus 168 ~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~--- 244 (451)
+..++.++. .++|.||+.+++|+... ......+ ..+..++++|+++|+++++.
T Consensus 174 n~~~i~al~-----------~~Gd~Vi~d~~~h~s~~-~~~~~~G------------a~v~~~~~~d~~~le~~l~~~i~ 229 (489)
T PLN02483 174 NSTIIPALI-----------GKGGLIISDSLNHNSIV-NGARGSG------------ATIRVFQHNTPSHLEEVLREQIA 229 (489)
T ss_pred HHHHHHHhC-----------CCCCEEEEcchhhHHHH-HHHHHcC------------CeEEEEeCCCHHHHHHHHHhhhh
Confidence 998887654 16888887777776543 3322222 33556778888888877641
Q ss_pred ---C------CeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccC--CCcccccccccccCCCc---ce
Q 013008 245 ---G------KTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCG--LGRTGYLWAHEHYGIFP---DI 310 (451)
Q Consensus 245 ---~------~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg--~gr~G~~~~~~~~~~~p---di 310 (451)
. ...+|++|++.++.|.+.+ +++|+++|++||++||+||+|+- +|++|.+ ..+++++.| |+
T Consensus 230 ~~~p~t~~p~~k~livve~v~s~~G~~~~----l~~I~~la~~~~~~livDEa~s~g~~G~~G~g-~~~~~~v~~~~~dI 304 (489)
T PLN02483 230 EGQPRTHRPWKKIIVIVEGIYSMEGELCK----LPEIVAVCKKYKAYVYLDEAHSIGAVGKTGRG-VCELLGVDPADVDI 304 (489)
T ss_pred ccccccccCCceEEEEECCCCCCCCcccC----HHHHHHHHHHcCCEEEEECcCccCccCCCCCc-hHHhcCCCcccCcE
Confidence 1 1358889999999998887 99999999999999999999962 3445543 345556543 55
Q ss_pred e--eecccccCCcccccccccHHHHhhccCCCccCCCC--CcHHHHHHHHHHHHHhcCh-------HHHHH---------
Q 013008 311 M--TLAKPLAGGLPIGAALVTEKVASAINYGDHGSTFA--GSPLVCNAAIAVLDKISNP-------AFLAS--------- 370 (451)
Q Consensus 311 ~--t~sK~lg~G~~iG~v~~~~~i~~~~~~~~~~~t~~--~~~~~~aaa~aal~~~~~~-------~~~~~--------- 370 (451)
+ ||||++|+ +.||+++++++++.++......+++ .+|..++++.++|+.+..+ +..++
T Consensus 305 ~~~SfSKs~g~--~GG~i~~~~~li~~l~~~~~~~~~~~~~~p~~~~~~~aaL~~l~~~~g~~~~~~~~~~l~~~~~~l~ 382 (489)
T PLN02483 305 MMGTFTKSFGS--CGGYIAGSKELIQYLKRTCPAHLYATSMSPPAVQQVISAIKVILGEDGTNRGAQKLAQIRENSNFFR 382 (489)
T ss_pred EEEecchhccc--CceEEEcCHHHHHHHHHhCccccccCCcCHHHHHHHHHHHHHHHhCccccchHHHHHHHHHHHHHHH
Confidence 5 89999974 3489999999999987544433343 4667777788888765321 11111
Q ss_pred -HHhCCCCccee-cccceeEEEEec--CChHHHHHHHHHCCceeeecCC------CCEEEEeCCCCCCHHHHHHHHHHHH
Q 013008 371 -KLARNPHVKDV-RGLGLIIGIEFD--VSATPVVDACRDSGLLVLTAGK------GNVVRLVPPLIISEQELDQAVEILC 440 (451)
Q Consensus 371 -~~~~~~~~~~v-~g~G~~~~~~~~--~~~~~~~~~l~~~Gv~~~~~~~------~~~iri~~~~~~t~e~i~~~l~~l~ 440 (451)
.++++. +... ...+.+.++.+. ....++++.|+++||.+.+.+. .+.+|+++++.+|+|+|++++++|+
T Consensus 383 ~~L~~~G-~~v~~~~~sp~~~l~l~~~~~~~~~~~~Ll~~GI~v~~~~fp~~p~~~~~vRi~isa~~t~edId~~l~~L~ 461 (489)
T PLN02483 383 SELQKMG-FEVLGDNDSPVMPIMLYNPAKIPAFSRECLKQNVAVVVVGFPATPLLLARARICISASHSREDLIKALEVIS 461 (489)
T ss_pred HHHHHCC-CcccCCCCCCEEEEEECCHHHHHHHHHHHHHCCcEEeeeCCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHH
Confidence 222222 1111 122345555542 2345799999999999985432 1578999999999999999999999
Q ss_pred HHHHHH
Q 013008 441 KTLPVL 446 (451)
Q Consensus 441 ~~l~~~ 446 (451)
++++.+
T Consensus 462 ~~~~~~ 467 (489)
T PLN02483 462 EVGDLV 467 (489)
T ss_pred HHHHHh
Confidence 988765
No 106
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=99.96 E-value=3e-27 Score=222.12 Aligned_cols=331 Identities=15% Similarity=0.145 Sum_probs=233.1
Q ss_pred ccEEEecCC--CEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHhhccC----CCeEEecC
Q 013008 89 GCKLYDAEG--REYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSF----ADRVFFSN 162 (451)
Q Consensus 89 G~~l~d~~G--~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~----~e~v~~~~ 162 (451)
.+.=||..+ ..+|-+.-... -| -.+|+|++|++++++++.+++.....+...++..+.+++++ .|+++|++
T Consensus 14 ~s~KWd~~~g~~DvlPmWVADM--Df-~~pp~i~~Al~~rvdhGvfGY~~~~~~~~~ai~~w~~~r~~~~i~~e~i~~~p 90 (388)
T COG1168 14 NSLKWDAHPGNEDVLPMWVADM--DF-PTPPEIIEALRERVDHGVFGYPYGSDELYAAIAHWFKQRHQWEIKPEWIVFVP 90 (388)
T ss_pred CceeccccCCCCCcceeeeecc--cC-CCCHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhcCCCCCcceEEEcC
Confidence 333455544 44444433322 13 27899999999999987776664444457888888888875 78999999
Q ss_pred CHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhc
Q 013008 163 TGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLI 242 (451)
Q Consensus 163 sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l 242 (451)
+..-++..+|+.. |. ++|.|++..|.||... .+....+......++.-....... |+++||+.+
T Consensus 91 ~VVpgi~~~I~~~---T~--------~gd~Vvi~tPvY~PF~-~~i~~n~R~~i~~pL~~~~~~y~i----D~~~LE~~~ 154 (388)
T COG1168 91 GVVPGISLAIRAL---TK--------PGDGVVIQTPVYPPFY-NAIKLNGRKVIENPLVEDDGRYEI----DFDALEKAF 154 (388)
T ss_pred cchHhHHHHHHHh---Cc--------CCCeeEecCCCchHHH-HHHhhcCcEEEeccccccCCcEEe----cHHHHHHHH
Confidence 9999999999954 43 7999999999998875 444455544444333221112222 899999999
Q ss_pred CCCC-eEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccc-cccccccCCCcc-------eeee
Q 013008 243 QPGK-TAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGY-LWAHEHYGIFPD-------IMTL 313 (451)
Q Consensus 243 ~~~~-~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~-~~~~~~~~~~pd-------i~t~ 313 (451)
.+.+ ...|+|+|.|+.| .++++++|++|.+||.+||+++|+||+|+.+-..|. ...+. .+.++ +++-
T Consensus 155 ~~~~vkl~iLCnPHNP~G--rvwt~eeL~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a--~ls~~~a~~~it~~sa 230 (388)
T COG1168 155 VDERVKLFILCNPHNPTG--RVWTKEELRKIAELCLRHGVRVISDEIHADLVLGGHKHIPFA--SLSERFADNSITLTSA 230 (388)
T ss_pred hcCCccEEEEeCCCCCCC--ccccHHHHHHHHHHHHHcCCEEEeecccccccccCCCccchh--hcChhhhcceEEEeec
Confidence 8665 4566677766654 689999999999999999999999999999866673 22221 22222 2344
Q ss_pred ccccc-CCcccccccc-cHHHHhhccC-CCccCCCCCcHHHHHHHHHHHHHhcChHHHHH---------------HHhCC
Q 013008 314 AKPLA-GGLPIGAALV-TEKVASAINY-GDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS---------------KLARN 375 (451)
Q Consensus 314 sK~lg-~G~~iG~v~~-~~~i~~~~~~-~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~---------------~~~~~ 375 (451)
||+++ +|+.+++++. ++++.+++.. .......+.|.+++.|..++++ +.+.|++. +-+..
T Consensus 231 SKtFNlaGL~~a~~Ii~n~~lr~~~~~~l~~~~~~~~n~lg~~A~~aAY~--~G~~WLd~L~~yl~~N~~~~~~~l~~~~ 308 (388)
T COG1168 231 SKTFNLAGLKCAYIIISNRELRAKFLKRLKRNGLHGPSALGIIATEAAYN--QGEPWLDELLEYLKDNRDYVADFLNKHL 308 (388)
T ss_pred cccccchhhhheeEEecCHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHH--hchHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 79998 6899998776 5666555432 2334455678999999999998 46677666 44667
Q ss_pred CCcceecccceeE-EEEec---CChHHHHHHHHHC-CceeeecC---C--CCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 013008 376 PHVKDVRGLGLII-GIEFD---VSATPVVDACRDS-GLLVLTAG---K--GNVVRLVPPLIISEQELDQAVEILCKTLPV 445 (451)
Q Consensus 376 ~~~~~v~g~G~~~-~~~~~---~~~~~~~~~l~~~-Gv~~~~~~---~--~~~iri~~~~~~t~e~i~~~l~~l~~~l~~ 445 (451)
|.+....+.|+++ |+++. .+..++.+.|+++ +|.+.++. . .+++|+ +++++++-+++++++|..+++.
T Consensus 309 P~v~v~~p~gTYL~WLD~r~l~l~d~~l~~~ll~~akVal~~G~~FG~~g~gf~Rl--N~acpr~~L~eal~ri~~al~~ 386 (388)
T COG1168 309 PGVKVTEPQGTYLAWLDCRELGLDDSELAEFLLEEAKVALSPGSTFGEEGSGFVRL--NFACPRAILEEALERLKRALKK 386 (388)
T ss_pred CCcEEecCCCceeeeeeccccCCChHHHHHHHHHhhcEeccCCCccCcCCCceEEE--ecCCCHHHHHHHHHHHHHHHhc
Confidence 8888788888764 56773 3445777888754 66666542 1 156777 8999999999999999999875
Q ss_pred H
Q 013008 446 L 446 (451)
Q Consensus 446 ~ 446 (451)
+
T Consensus 387 ~ 387 (388)
T COG1168 387 R 387 (388)
T ss_pred c
Confidence 4
No 107
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.96 E-value=4.1e-27 Score=234.45 Aligned_cols=312 Identities=19% Similarity=0.191 Sum_probs=207.6
Q ss_pred EEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCH----HHHHHHHHHhhccC----CCeEEecCCHHHHHHH
Q 013008 99 EYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSI----PQIELAKRLVACSF----ADRVFFSNTGTEANEA 170 (451)
Q Consensus 99 ~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~----~~~~l~~~l~~~~~----~e~v~~~~sG~eA~~~ 170 (451)
..+|+..|.. +++ .+|.+++++.+++.+.......|+.. .+..+++++.+.++ .++|++|+|+++++..
T Consensus 27 ~~i~l~~~~~--~~~-~~~~~~~al~~~l~~~~~~~~~Y~~~g~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~~l~~ 103 (368)
T PRK03317 27 VPVRLNTNEN--PYP-PSPALVADIAEAVAEAAAGLNRYPDRDAVALRADLAAYLTAQTGVGLTVENVWAANGSNEILQQ 103 (368)
T ss_pred ceeEecCCCC--CCC-CCHHHHHHHHHHHhhhhhhhccCCCCchHHHHHHHHHHhhhhccCCCChhhEEECCCHHHHHHH
Confidence 4688887755 454 78899999998875421111222222 24445555544333 6799999999999999
Q ss_pred HHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEE
Q 013008 171 AIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAV 250 (451)
Q Consensus 171 al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aav 250 (451)
+++++. ++++.|++.+|+|+++.......+ ..... .+...+.. -|++++++++..+++++|
T Consensus 104 ~~~~~~-----------~~gd~v~v~~P~y~~~~~~~~~~g-~~~~~---~~~~~~~~----~d~~~l~~~~~~~~~~~i 164 (368)
T PRK03317 104 LLQAFG-----------GPGRTALGFVPSYSMHPIIARGTH-TEWVE---GPRAADFT----LDVDAAVAAIAEHRPDVV 164 (368)
T ss_pred HHHHhc-----------CCCCEEEEeCCChHHHHHHHHhcC-CeeEE---cccCCCCC----CCHHHHHHHHhccCCCEE
Confidence 999765 268999999999998765443222 11111 01111111 278999999874445555
Q ss_pred EEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccccccCCCccee---eeccccc-CCcccccc
Q 013008 251 FVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIM---TLAKPLA-GGLPIGAA 326 (451)
Q Consensus 251 i~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~---t~sK~lg-~G~~iG~v 326 (451)
+++..++++|.+. + ++++.++|+.++++||+||+|++|++.|........+..|+++ +|||++| +|+|+||+
T Consensus 165 ~l~~p~NPtG~~~-~---~~~l~~l~~~~~~~lI~DE~y~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~ 240 (368)
T PRK03317 165 FLTSPNNPTGTAL-P---LDDVEAILDAAPGIVVVDEAYAEFRRSGTPSALTLLPEYPRLVVSRTMSKAFAFAGGRLGYL 240 (368)
T ss_pred EEeCCCCCCCCCC-C---HHHHHHHHHHCCceEEEeCCchhhcccCCcCHHHHHHhCCCEEEEEechhhhccchhhhhhh
Confidence 5555566667655 4 4555555555589999999999987666443344444456666 8999998 69999999
Q ss_pred cccHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH-------------HHhCCCCcceecccceeEEE-Ee
Q 013008 327 LVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS-------------KLARNPHVKDVRGLGLIIGI-EF 392 (451)
Q Consensus 327 ~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~-------------~~~~~~~~~~v~g~G~~~~~-~~ 392 (451)
++++++++.+.... .+++.++++++++.++|+.. +.+.+. .++.+. +....+.|.++.+ .+
T Consensus 241 ~~~~~~~~~l~~~~--~~~~~s~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~ 315 (368)
T PRK03317 241 AAAPAVVDALRLVR--LPYHLSAVTQAAARAALRHA--DELLASVAALRAERDRVVAWLRELG-LRVAPSDANFVLFGRF 315 (368)
T ss_pred hCCHHHHHHHHhcC--CCCCCCHHHHHHHHHHhhCH--HHHHHHHHHHHHHHHHHHHHHHHCC-CEeCCCCCcEEEEecc
Confidence 99999999886433 46788999999999988742 222211 222222 2223444555444 33
Q ss_pred cCChHHHHHHHHHCCceeeecCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 013008 393 DVSATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTLPV 445 (451)
Q Consensus 393 ~~~~~~~~~~l~~~Gv~~~~~~~~~~iri~~~~~~t~e~i~~~l~~l~~~l~~ 445 (451)
.+...+.+.|.++||++.+.+..+++|+++. +.+++++++++|+++++.
T Consensus 316 -~~~~~~~~~l~~~Gv~v~~~~~~~~iRi~~~---~~~~~~~~~~~l~~~~~~ 364 (368)
T PRK03317 316 -ADRHAVWQGLLDRGVLIRDVGIPGWLRVTIG---TPEENDAFLAALAEVLAT 364 (368)
T ss_pred -CCHHHHHHHHHHCCEEEEeCCCCCeEEEecC---CHHHHHHHHHHHHHHHHH
Confidence 3567899999999999988765578999743 788999999999988753
No 108
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.95 E-value=5e-26 Score=229.11 Aligned_cols=329 Identities=13% Similarity=0.070 Sum_probs=218.6
Q ss_pred CCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcc-ccc--CCCCCHHHHHHHHHHhhccC----C-CeEEecCCHHHHH
Q 013008 97 GREYLDLSSGIAVNALGHGDADWIKAVVDQANVLT-HVS--NMYYSIPQIELAKRLVACSF----A-DRVFFSNTGTEAN 168 (451)
Q Consensus 97 G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~-~~~--~~~~~~~~~~l~~~l~~~~~----~-e~v~~~~sG~eA~ 168 (451)
.+..+||..|... .+ ..+|.+.+++.+.+.... ..+ ..+..+.+..+++++.+.++ . ++|++|+|+++|+
T Consensus 38 ~~~~i~l~~g~~~-~~-~p~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~l~~~~g~~~~~~~~I~it~Ga~~al 115 (405)
T PRK06207 38 PGRPVDFSHGDVD-AH-EPTPGAFELFSAGVERGGVQAYTEYRGDADIRELLAARLAAFTGAPVDAADELIITPGTQGAL 115 (405)
T ss_pred CCCceecCCcCCC-CC-CCCHHHHHHHHHHHhcCCCccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHH
Confidence 3566788776553 23 256788898888776531 111 12233347778888877655 4 7899999999999
Q ss_pred HHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeE
Q 013008 169 EAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTA 248 (451)
Q Consensus 169 ~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a 248 (451)
..+++++. +++|.|++.+|+|+++.......+.. ....+.....+...+ --|+++|+++++++...
T Consensus 116 ~~~~~~l~-----------~~Gd~Vlv~~P~y~~~~~~~~~~g~~-v~~v~~~~~~~~~~~--~~d~~~l~~~~~~~~k~ 181 (405)
T PRK06207 116 FLAVAATV-----------ARGDKVAIVQPDYFANRKLVEFFEGE-MVPVQLDYLSADKRA--GLDLDQLEEAFKAGVRV 181 (405)
T ss_pred HHHHHHhc-----------CCCCEEEEeCCCchhHHHHHHHcCCE-EEEEeccccCcccCC--CcCHHHHHHhhhhcCeE
Confidence 99998665 26899999999998876444333221 111000000000000 02789999988754344
Q ss_pred EEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccc-cccccCC----Ccceeeeccccc-CCcc
Q 013008 249 AVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLW-AHEHYGI----FPDIMTLAKPLA-GGLP 322 (451)
Q Consensus 249 avi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~-~~~~~~~----~pdi~t~sK~lg-~G~~ 322 (451)
++++.|. +++| .+.+.+.+++|.++|++||++||+||+|..|...|... ....+.. ..-+.+|||+++ +|+|
T Consensus 182 v~l~~P~-NPTG-~~~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~lpGlR 259 (405)
T PRK06207 182 FLFSNPN-NPAG-VVYSAEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTHLRALPIDPENVITIMGPSKTESLSGYR 259 (405)
T ss_pred EEECCCC-CCCC-cCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCchhcCCCCcCcEEEEecchhhccCcccc
Confidence 5566664 4444 46789999999999999999999999999875444321 1111111 223447899999 7999
Q ss_pred cccccccHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH--------------HHhCCCCcceecc-ccee
Q 013008 323 IGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS--------------KLARNPHVKDVRG-LGLI 387 (451)
Q Consensus 323 iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~--------------~~~~~~~~~~v~g-~G~~ 387 (451)
+||+++++++++.+.........+.+.+++.++.++|+. ..+++++ .+++++.+....+ .|++
T Consensus 260 iG~ii~~~~l~~~~~~~~~~~~~~~~~~~q~a~~~~l~~--~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~gg~f 337 (405)
T PRK06207 260 LGVAFGSPAIIDRMEKLQAIVSLRAAGYSQAVLRTWFSE--PDGWMKDRIARHQAIRDDLLRVLRGVEGVFVRAPQAGSY 337 (405)
T ss_pred eEEEEcCHHHHHHHHHHHhHhccCCCHHHHHHHHHHHhC--cHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCeeEE
Confidence 999999999998886443334455677888888877752 1222211 2234443433333 4788
Q ss_pred EEEEec---CChHHHHHHHH-HCCceeeecCC-----CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHh
Q 013008 388 IGIEFD---VSATPVVDACR-DSGLLVLTAGK-----GNVVRLVPPLIISEQELDQAVEILCKTLPVLD 447 (451)
Q Consensus 388 ~~~~~~---~~~~~~~~~l~-~~Gv~~~~~~~-----~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~~ 447 (451)
+|+.+. .+..++++.|+ ++||.+.|+.. ++++|++.. .+++++++++++|.+++++.+
T Consensus 338 l~~~l~~~~~~~~~~~~~l~~~~gV~v~pG~~F~~~~~~~~Ris~~--~~~~~l~~al~rl~~~l~~~~ 404 (405)
T PRK06207 338 LFPRLPRLAVSLHDFVKILRLQAGVIVTPGTEFSPHTADSIRLNFS--QDHAAAVAAAERIAQLIERYR 404 (405)
T ss_pred EEEeCcccCCCHHHHHHHHHHhcCEEEeCchHhCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHhh
Confidence 998884 24678999997 67999998641 367888655 479999999999999998765
No 109
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.95 E-value=4.3e-26 Score=228.03 Aligned_cols=323 Identities=15% Similarity=0.112 Sum_probs=218.6
Q ss_pred CCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHhhccC--CCeEEecCCHHHHHHHHHHH
Q 013008 97 GREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSF--ADRVFFSNTGTEANEAAIKF 174 (451)
Q Consensus 97 G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~e~v~~~~sG~eA~~~al~~ 174 (451)
+..+|++..+.. .++ .+|.+.+++.+++..... ..+.......++.++++++++ .+++++++|+++|+..+++.
T Consensus 27 ~~~~i~l~~~~~--~~~-~~~~~~~a~~~~~~~~~~-~~y~~~~g~~~lr~~ia~~l~~~~~~v~~~~g~t~al~~~~~~ 102 (380)
T PRK06225 27 DKEMIWMGQNTN--HLG-PHEEVREAMIRCIEEGEY-CKYPPPEGFPELRELILKDLGLDDDEALITAGATESLYLVMRA 102 (380)
T ss_pred cCCeEEccCCCC--CCC-CCHHHHHHHHHHHhcCCC-CCCCCCcchHHHHHHHHHhcCCCCCcEEEeCCHHHHHHHHHHH
Confidence 456888887644 454 789999999998865321 111222236778888888876 67899999999999999987
Q ss_pred HHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEE-EEc
Q 013008 175 ARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAV-FVE 253 (451)
Q Consensus 175 a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aav-i~e 253 (451)
+.. +++.|++.+|+|+.+..... ..+......+......+. .-|++++++.+.++ +++| +++
T Consensus 103 ~~~-----------~gd~vl~~~p~y~~~~~~~~-~~g~~~~~v~~~~~~~~~----~~d~~~l~~~~~~~-~~~v~l~~ 165 (380)
T PRK06225 103 FLS-----------PGDNAVTPDPGYLIIDNFAS-RFGAEVIEVPIYSEECNY----KLTPELVKENMDEN-TRLIYLID 165 (380)
T ss_pred hcC-----------CCCEEEEcCCCCcchHHHHH-HhCceEEeeccccccCCc----cCCHHHHHhhcCCC-ceEEEEeC
Confidence 641 57889999999986543222 222111100000000011 12789999988754 5555 455
Q ss_pred cccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccccc-cCCCcceeeeccccc-CCcccccccccHH
Q 013008 254 PIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEH-YGIFPDIMTLAKPLA-GGLPIGAALVTEK 331 (451)
Q Consensus 254 p~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~-~~~~pdi~t~sK~lg-~G~~iG~v~~~~~ 331 (451)
|.+ ++|. .++.+.+++|.++|++||+++|+||+|.+|.. +....... .....++.+|||.+| +|+|+||++++++
T Consensus 166 p~N-ptG~-~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~-~~~~~~~~~~~~~i~~~s~SK~~g~~G~RiG~i~~~~~ 242 (380)
T PRK06225 166 PLN-PLGS-SYTEEEIKEFAEIARDNDAFLLHDCTYRDFAR-EHTLAAEYAPEHTVTSYSFSKIFGMAGLRIGAVVATPD 242 (380)
T ss_pred CCC-CCCc-CCCHHHHHHHHHHHHHCCcEEEEehhHHHHhc-cCCchhhcCCCCEEEEeechhhcCCccceeEEEecCHH
Confidence 644 4454 56889999999999999999999999987632 22111111 122345668999998 6899999999999
Q ss_pred HHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH--------------HHhCCCCc--ceecccceeEEEEec--
Q 013008 332 VASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS--------------KLARNPHV--KDVRGLGLIIGIEFD-- 393 (451)
Q Consensus 332 i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~--------------~~~~~~~~--~~v~g~G~~~~~~~~-- 393 (451)
+++.+... ...+++.|.++++++.++|+.. .++.++ .++.++.+ ...+..|.++++.+.
T Consensus 243 l~~~~~~~-~~~~~~~~~~~~~~a~~~l~~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~ 319 (380)
T PRK06225 243 LIEVVKSI-VINDLGTNVIAQEAAIAGLKVK--DEWIDRIRRTTFKNQKLIKEAVDEIEGVFLPVYPSHGNMMVIDISEA 319 (380)
T ss_pred HHHHHHHH-HhcccCCCHHHHHHHHHHHhcc--hHHHHHHHHHHHHHHHHHHHHHHhCcCCccccCCCCCeEEEEEcccc
Confidence 99887643 2346777888888888777632 222211 33444322 224556888888873
Q ss_pred -CChHHHHHHHHHCCceeeecC------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHhh
Q 013008 394 -VSATPVVDACRDSGLLVLTAG------KGNVVRLVPPLIISEQELDQAVEILCKTLPVLDS 448 (451)
Q Consensus 394 -~~~~~~~~~l~~~Gv~~~~~~------~~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~~~ 448 (451)
.+..++.+.|.++||.+.|+. ..+.+|+++ ..++|++++++++|+++++++|+
T Consensus 320 ~~~~~~l~~~l~~~gi~v~~g~~~~~~~~~~~iR~s~--~~~~e~l~~~~~~l~~~~~~~~~ 379 (380)
T PRK06225 320 GIDPEDLVEYLLERKIFVRQGTYTSKRFGDRYIRVSF--SIPREQVEVFCEEFPDVVETLRT 379 (380)
T ss_pred cCCHHHHHHHHHHCCEEEcCCcccCcCCCCceEEEEe--CCCHHHHHHHHHHHHHHHHHhhc
Confidence 357789999999999998752 124688864 55899999999999999998875
No 110
>PRK07682 hypothetical protein; Validated
Probab=99.95 E-value=1.5e-25 Score=224.02 Aligned_cols=321 Identities=13% Similarity=0.053 Sum_probs=212.2
Q ss_pred EEEeeccCcccccCCCCCHHHHHHHHHHHhhccccc--CCCCCHHHHHHHHHHhhccC----CC-eEEecCCHHHHHHHH
Q 013008 99 EYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVS--NMYYSIPQIELAKRLVACSF----AD-RVFFSNTGTEANEAA 171 (451)
Q Consensus 99 ~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~--~~~~~~~~~~l~~~l~~~~~----~e-~v~~~~sG~eA~~~a 171 (451)
..|+|..+... ++ .++.+.+++.+.++.....+ ..+....+.++++++.+.++ .+ +|++|+|+++|+..+
T Consensus 21 ~~i~l~~~~~~--~~-~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~ 97 (378)
T PRK07682 21 GVISLGVGEPD--FV-TPWNVREASIRSLEQGYTSYTANAGLLELRQEIAKYLKKRFAVSYDPNDEIIVTVGASQALDVA 97 (378)
T ss_pred CeEEeCCCCCC--CC-CCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHH
Confidence 46888887663 44 46678888888776421111 22233446677777766544 33 799999999999999
Q ss_pred HHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEE-
Q 013008 172 IKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAV- 250 (451)
Q Consensus 172 l~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aav- 250 (451)
++.+. ++++.|++.+|+|+++.......+.... . .+...+-.+ .-|+++|++++.+ +++++
T Consensus 98 ~~~l~-----------~~gd~vl~~~p~y~~~~~~~~~~g~~~~-~---~~~~~~~~~--~~d~~~l~~~~~~-~~~~v~ 159 (378)
T PRK07682 98 MRAII-----------NPGDEVLIVEPSFVSYAPLVTLAGGVPV-P---VATTLENEF--KVQPAQIEAAITA-KTKAIL 159 (378)
T ss_pred HHHhC-----------CCCCEEEEeCCCchhhHHHHHHcCCEEE-E---eecCCccCC--CCCHHHHHhhcCc-ccEEEE
Confidence 88664 2689999999999977544433322111 1 011100000 1278999998865 45555
Q ss_pred EEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccc-cccCC---Ccceeeeccccc-CCccccc
Q 013008 251 FVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAH-EHYGI---FPDIMTLAKPLA-GGLPIGA 325 (451)
Q Consensus 251 i~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~-~~~~~---~pdi~t~sK~lg-~G~~iG~ 325 (451)
++.| ++++|. +++.+.+++|.++|++||+++|+||+|.+|.+.+..... ...+. ...+.+|||.++ .|+|+||
T Consensus 160 ~~~p-~NPtG~-~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~ 237 (378)
T PRK07682 160 LCSP-NNPTGA-VLNKSELEEIAVIVEKHDLIVLSDEIYAELTYDEAYTSFASIKGMRERTILISGFSKGFAMTGWRLGF 237 (378)
T ss_pred EECC-CCCcCc-CcCHHHHHHHHHHHHHcCcEEEEehhhhhcccCCCCCChhhcccccCCEEEEecCcccccChhhhhhh
Confidence 5555 455554 678999999999999999999999999988654432111 11122 223458999998 7999999
Q ss_pred ccccHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH--------------HHhCCCCcceeccc-ceeEEE
Q 013008 326 ALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS--------------KLARNPHVKDVRGL-GLIIGI 390 (451)
Q Consensus 326 v~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~--------------~~~~~~~~~~v~g~-G~~~~~ 390 (451)
+++++++++.+.......+++.+++++.++.++|+.. +.+.++ .++++. +....+. |+++|+
T Consensus 238 ~~~~~~~i~~l~~~~~~~~~~~~~~~q~a~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~L~~~~-~~~~~p~g~~~~~~ 314 (378)
T PRK07682 238 IAAPVYFSEAMLKIHQYSMMCAPTMAQFAALEALRAG--NDDVIRMRDSYRKRRNFFVTSFNEIG-LTCHVPGGAFYAFP 314 (378)
T ss_pred hhcCHHHHHHHHHHHHhhccCCCHHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHHHCC-CccCCCCeeEEEEE
Confidence 9999999998764333345667889999988888632 112111 223332 2223343 456666
Q ss_pred Eec---CChHHHHHHHH-HCCceeeecC---C--CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHh
Q 013008 391 EFD---VSATPVVDACR-DSGLLVLTAG---K--GNVVRLVPPLIISEQELDQAVEILCKTLPVLD 447 (451)
Q Consensus 391 ~~~---~~~~~~~~~l~-~~Gv~~~~~~---~--~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~~ 447 (451)
.+. .+..++++.|+ ++||.+.|+. . .+++|++.. .+++++++++++|.+++++++
T Consensus 315 ~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~iRis~~--~~~~~l~~~l~~l~~~l~~~~ 378 (378)
T PRK07682 315 SISSTGLSSEEFAEQLLLEEKVAVVPGSVFGESGEGFIRCSYA--TSLEQLQEAMKRMKRFVENKK 378 (378)
T ss_pred eccCCCCCHHHHHHHHHHhCCEEEcCchhhCcCCCCeEEEEeC--CCHHHHHHHHHHHHHHHhhcC
Confidence 652 35678988887 6799998863 1 367888655 579999999999999987653
No 111
>PRK07324 transaminase; Validated
Probab=99.95 E-value=7e-26 Score=225.68 Aligned_cols=325 Identities=14% Similarity=0.162 Sum_probs=216.0
Q ss_pred EecCCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHhhccC---CCeEEecCCHHHHHH
Q 013008 93 YDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSF---ADRVFFSNTGTEANE 169 (451)
Q Consensus 93 ~d~~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~---~e~v~~~~sG~eA~~ 169 (451)
++..|..++++..+... + ..++.+ +++.+++......+ .......+|.+.++++++ .++|++|+|+++|+.
T Consensus 21 ~~~~~~~~~~~~~~e~~--~-~~~~~~-~~~~~~~~~~~~~Y--~~~~G~~~lr~~ia~~~~~~~~~~vi~t~G~~~al~ 94 (373)
T PRK07324 21 YDIAESCIDSLTLEELL--A-LAGKNP-EAFYQELGQKKLTY--GWIEGSPEFKEAVASLYQNVKPENILQTNGATGANF 94 (373)
T ss_pred cccccCCCCCCcHHHHH--h-ccCcch-HHHHHHHhcCCccC--CCCCCCHHHHHHHHHHhcCCChhhEEEcCChHHHHH
Confidence 45566667777665441 2 255667 88887776532222 112224466677777653 689999999999999
Q ss_pred HHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEE
Q 013008 170 AAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAA 249 (451)
Q Consensus 170 ~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aa 249 (451)
.++..+. +++|+|++..|+|..+.......+.... ..+..++..+. .|++++++.+.+ ++++
T Consensus 95 ~~~~~l~-----------~~gd~Vl~~~P~y~~~~~~~~~~g~~v~----~v~~~~~~~~~--~d~~~l~~~~~~-~~kl 156 (373)
T PRK07324 95 LVLYALV-----------EPGDHVISVYPTYQQLYDIPESLGAEVD----YWQLKEENGWL--PDLDELRRLVRP-NTKL 156 (373)
T ss_pred HHHHHhC-----------CCCCEEEEcCCCchhHHHHHHHcCCEEE----EEecccccCCC--CCHHHHHHhCCC-CCcE
Confidence 9998664 2689999999999876543322222111 01111110000 278999988865 4556
Q ss_pred EEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCccccccc-ccccCCCcceeeeccccc-CCccccccc
Q 013008 250 VFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWA-HEHYGIFPDIMTLAKPLA-GGLPIGAAL 327 (451)
Q Consensus 250 vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~-~~~~~~~pdi~t~sK~lg-~G~~iG~v~ 327 (451)
|++...++++|. +.+++.+++|.++|++||+++|+||+|.++...+.... .+.++....+.+|||.++ .|+|+||++
T Consensus 157 i~i~~p~NPtG~-~~~~~~l~~i~~~a~~~~~~ii~De~y~~l~~~~~~~s~~~~~~~~I~~~s~SK~~~~~G~RiG~i~ 235 (373)
T PRK07324 157 ICINNANNPTGA-LMDRAYLEEIVEIARSVDAYVLSDEVYRPLDEDGSTPSIADLYEKGISTNSMSKTYSLPGIRVGWIA 235 (373)
T ss_pred EEEeCCCCCCCC-CCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCCChhhccCCEEEEecchhhcCCccceeEEEe
Confidence 666555555554 57899999999999999999999999998755442111 112222233458999998 699999999
Q ss_pred ccHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH--------------HHhCCCCcceecccc-eeEEEEe
Q 013008 328 VTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS--------------KLARNPHVKDVRGLG-LIIGIEF 392 (451)
Q Consensus 328 ~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~--------------~~~~~~~~~~v~g~G-~~~~~~~ 392 (451)
+++++++.+.......+++.+++++.++..+|+. .+.++++ .+++++.+..+.+.| .++++.+
T Consensus 236 ~~~~li~~~~~~~~~~~~~~~~~~q~~a~~~l~~--~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~p~gg~~~~i~~ 313 (373)
T PRK07324 236 ANEEVIDILRKYRDYTMICAGVFDDMLASLALEH--RDAILERNRKIVRTNLAILDEWVAKEPRVSYVKPKAVSTSFVKL 313 (373)
T ss_pred cCHHHHHHHHHHhCcEEecCChHHHHHHHHHHcC--HHHHHHHHHHHHHHHHHHHHHHHhcCCCceEECCCceEEEEEEe
Confidence 9999999887655555677888998888887752 1222221 233445454455554 4555555
Q ss_pred c--CChHHHHHHHH-HCCceeeecCC---CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 013008 393 D--VSATPVVDACR-DSGLLVLTAGK---GNVVRLVPPLIISEQELDQAVEILCKTLPVL 446 (451)
Q Consensus 393 ~--~~~~~~~~~l~-~~Gv~~~~~~~---~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~ 446 (451)
+ ....+++++|+ +.||.+.|+.. .+++|++ +..+++.+++++++|.+++++.
T Consensus 314 ~~~~~~~~~~~~ll~~~gv~v~pg~~F~~~~~iRis--~~~~~~~l~~~l~rl~~~l~~~ 371 (373)
T PRK07324 314 DVDMPSEDFCLKLLKETGVLLVPGNRFDLEGHVRIG--YCCDTETLKKGLKKLSEFLREF 371 (373)
T ss_pred CCCCCHHHHHHHHHHhcCEEEECccccCCCCeEEEE--ecCCHHHHHHHHHHHHHHHHhc
Confidence 3 45678999876 67999998742 3678885 4567999999999999998753
No 112
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.95 E-value=1.2e-25 Score=210.37 Aligned_cols=314 Identities=18% Similarity=0.159 Sum_probs=239.3
Q ss_pred CEEEeeccCcccccCCC-CCHHHHHHHHHHHhhcccccCC-----CCCHHHHHHHHHHhhccCCCeEEecCCHHHHHHHH
Q 013008 98 REYLDLSSGIAVNALGH-GDADWIKAVVDQANVLTHVSNM-----YYSIPQIELAKRLVACSFADRVFFSNTGTEANEAA 171 (451)
Q Consensus 98 ~~~iD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~~~~~-----~~~~~~~~l~~~l~~~~~~e~v~~~~sG~eA~~~a 171 (451)
+++-=||||.| ||. .||+|.+|+.+.+++.+.+.++ +.+..+.+|++.|+++.+.|..++++|..-||...
T Consensus 171 k~VtVWCSNDY---Lgms~Hp~V~~A~~~tl~~hG~GAGGTRNIsG~s~~hv~LE~eLA~LHqK~aALlFsSCfVANDst 247 (570)
T KOG1360|consen 171 KKVTVWCSNDY---LGMSRHPEVLDAMHDTLDRHGAGAGGTRNISGHSKHHVRLEAELADLHQKEAALLFSSCFVANDST 247 (570)
T ss_pred CceEEEecCcc---ccccCChHHHHHHHHHHHHcCCCcCCccccCCCCchhhhHHHHHHHHhcCcceeeeeeeeeccchH
Confidence 56777899988 777 6999999999999986654322 34556899999999999999999999999999998
Q ss_pred HHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcC---CCCeE
Q 013008 172 IKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQ---PGKTA 248 (451)
Q Consensus 172 l~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~---~~~~a 248 (451)
+..+-+. =.+.+|..|.+.|.+.+..+..++.+. .++.+||+++|+++|+ +.-++
T Consensus 248 LftLak~----------lpgcei~SD~gNHASMI~GIrns~v~K------------~IFrHND~~hL~~lL~~~~~svPK 305 (570)
T KOG1360|consen 248 LFTLAKK----------LPGCEIFSDEGNHASMIQGIRNSRVPK------------HIFRHNDLDHLEQLLQSSPKSVPK 305 (570)
T ss_pred HHHHHHH----------CCCcEEeccccchHHHHHHhhhcCCcc------------eeeccCCHHHHHHHHHhCCCCCCc
Confidence 8765432 256788889999998877666554332 2467899999999998 34578
Q ss_pred EEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCccccc--ccccccCC--Cccee--eecccccCCcc
Q 013008 249 AVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYL--WAHEHYGI--FPDIM--TLAKPLAGGLP 322 (451)
Q Consensus 249 avi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~--~~~~~~~~--~pdi~--t~sK~lg~G~~ 322 (451)
.|-+|.++++.|.+.| |++|.++++|||++-.+||||. .|-+|.. +.-++.|+ +.||+ |++|++|. -
T Consensus 306 ivAFEtVhSM~Gavcp----leelcDvah~yGAiTFlDEVHA-VGlYG~rGaGvgerdGvm~kvDiIsGTLgKafGc--V 378 (570)
T KOG1360|consen 306 IVAFETVHSMDGAVCP----LEELCDVAHKYGAITFLDEVHA-VGLYGPRGAGVGERDGVMHKVDIISGTLGKAFGC--V 378 (570)
T ss_pred eEEEeeeeccCCCcCC----HHHHHHHHHHhCceeeeehhhh-hccccCCCCCccccCCcchhhhhcccchhhhccc--c
Confidence 8999999999999999 9999999999999999999996 4445542 23456676 56776 79999974 2
Q ss_pred cccccccHHHHhhccCC--CccCCCCCcHHHHHHHHHHHHHhcCh--HHHHH-----------HH--hCCCCcceecccc
Q 013008 323 IGAALVTEKVASAINYG--DHGSTFAGSPLVCNAAIAVLDKISNP--AFLAS-----------KL--ARNPHVKDVRGLG 385 (451)
Q Consensus 323 iG~v~~~~~i~~~~~~~--~~~~t~~~~~~~~aaa~aal~~~~~~--~~~~~-----------~~--~~~~~~~~v~g~G 385 (451)
.|||.+...++|.++.. .+..|.+.+|..++.|+++.+++..+ ..+++ ++ ..+|.+ ....
T Consensus 379 GGYIAat~~LvDmiRSyAaGFIFTTSLPP~vl~GAleaVr~lk~~eg~~lR~~hqrnv~~~kq~l~~~GiPVi---~~pS 455 (570)
T KOG1360|consen 379 GGYIAATRKLVDMIRSYAAGFIFTTSLPPMVLAGALEAVRILKSEEGRVLRRQHQRNVKYVKQLLMELGIPVI---PNPS 455 (570)
T ss_pred cceehhhhhHHHHHHHhcCceEEecCCChHHHHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHcCCccc---CCCc
Confidence 28999999999998764 34567778999999999999998654 22222 22 223322 2223
Q ss_pred eeEEEEec--CChHHHHHHHH-HCCceeeec-------CCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHh
Q 013008 386 LIIGIEFD--VSATPVVDACR-DSGLLVLTA-------GKGNVVRLVPPLIISEQELDQAVEILCKTLPVLD 447 (451)
Q Consensus 386 ~~~~~~~~--~~~~~~~~~l~-~~Gv~~~~~-------~~~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~~ 447 (451)
.++.+.+. ..+..+++.|+ ++|+++... |. ..+||.|...||.+-++.+++.+..+++++.
T Consensus 456 HIiPv~vgda~l~~~~sd~Li~~h~iYvQaINyPTV~rG~-E~LRiaPTP~HT~~mm~~lv~~l~~vw~~v~ 526 (570)
T KOG1360|consen 456 HIIPVRVGDAALAKQASDILISKHNIYVQAINYPTVARGT-ERLRIAPTPHHTPQMMNILVNALLDVWNEVG 526 (570)
T ss_pred ceeeeeccCHHHHHHHHHHHHHhcCeEEEeccCCcccccc-eeeecCCCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 34444442 23456777777 569998743 33 5799999999999999999999999988753
No 113
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=2.7e-25 Score=220.63 Aligned_cols=306 Identities=19% Similarity=0.189 Sum_probs=210.4
Q ss_pred CEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHhhccC--CCeEEecCCHHHHHHHHHHHH
Q 013008 98 REYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSF--ADRVFFSNTGTEANEAAIKFA 175 (451)
Q Consensus 98 ~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~e~v~~~~sG~eA~~~al~~a 175 (451)
.+++||.+|.+ ++| .+|.+.+++.+.++...+ ++.....++.+.++++++ .+++++++|+++++..++++.
T Consensus 29 ~~~i~l~~n~~--~~~-~~~~v~~a~~~~~~~~~~----~p~~g~~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~~ 101 (359)
T PRK03158 29 EKIVKLASNEN--PYG-PSPKVKEAIAAHLDELAL----YPDGYAPELRTKVAKHLGVDEEQLLFGAGLDEVIQMISRAL 101 (359)
T ss_pred CceEEecCCCC--CCC-CCHHHHHHHHHHHHHhhc----CCCCcHHHHHHHHHHHhCCCHHHEEECCCHHHHHHHHHHHH
Confidence 36899998876 466 588999999988776432 223335677777877776 678999999999999888765
Q ss_pred HHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEccc
Q 013008 176 RKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPI 255 (451)
Q Consensus 176 ~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~ 255 (451)
. .+++.|++.+|+|+++...+...+ ..... .+.. +. ..|++++++.+.+ ++++++++.+
T Consensus 102 ~-----------~~gd~v~~~~p~y~~~~~~~~~~g-~~~~~---~~~~-~~----~~d~~~l~~~~~~-~~~~v~i~~p 160 (359)
T PRK03158 102 L-----------NPGTNTVMAEPTFSQYRHNAIIEG-AEVRE---VPLK-DG----GHDLEAMLKAIDE-QTKIVWICNP 160 (359)
T ss_pred h-----------CCCCEEEEcCCCHHHHHHHHHHcC-CeEEE---EecC-CC----CcCHHHHHHhcCC-CCCEEEEeCC
Confidence 4 168899999999998654432222 11111 1111 00 1278999888865 4555555544
Q ss_pred cCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccc-ccc---ccccCCCcceeeeccccc-CCcccccccccH
Q 013008 256 QGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGY-LWA---HEHYGIFPDIMTLAKPLA-GGLPIGAALVTE 330 (451)
Q Consensus 256 ~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~-~~~---~~~~~~~pdi~t~sK~lg-~G~~iG~v~~~~ 330 (451)
++++|.+ ++.+.+.++++.|+ +|+++|+||+|..|-..+. ... .+.++...-+.+|||.+| .|+|+||+++++
T Consensus 161 ~NPtG~~-~~~~~l~~~~~~~~-~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~ 238 (359)
T PRK03158 161 NNPTGTY-VNHEELLSFLESVP-SHVLVVLDEAYYEYVTAEDYPDTLPLLEKYENLIVLRTFSKAYGLAALRVGYGIASE 238 (359)
T ss_pred CCCCCCC-CCHHHHHHHHHhCC-CCcEEEEECchHhhcCCcccccHHHHHHhcCCEEEEEechHhhcCcchhhehhcCCH
Confidence 6666664 56666777776664 6999999999987633221 111 112222223448999998 699999999999
Q ss_pred HHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH--------------HHhCCCCcceecccceeEEEEecCCh
Q 013008 331 KVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS--------------KLARNPHVKDVRGLGLIIGIEFDVSA 396 (451)
Q Consensus 331 ~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~--------------~~~~~~~~~~v~g~G~~~~~~~~~~~ 396 (451)
++++.+.... .+++.|++++.++.++|+ +.++.++ .++++ .+..+++.|.++|+.+....
T Consensus 239 ~~~~~~~~~~--~~~~~~~~~q~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~g~~i~~~~~~~~ 312 (359)
T PRK03158 239 ELIEKLNIAR--PPFNTTRIAQYAAIAALE---DQAFLKECVEKNAEGLEQYYAFCKEY-GLFYYPSQTNFIFVDTGRDA 312 (359)
T ss_pred HHHHHHHHhc--CCCCCCHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHHHHC-CCeeCCCcCcEEEEECCCCH
Confidence 9998886432 357789999999998885 2333222 22233 23345667889888875567
Q ss_pred HHHHHHHHHCCceeeecC---CCCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 013008 397 TPVVDACRDSGLLVLTAG---KGNVVRLVPPLIISEQELDQAVEILCKT 442 (451)
Q Consensus 397 ~~~~~~l~~~Gv~~~~~~---~~~~iri~~~~~~t~e~i~~~l~~l~~~ 442 (451)
.++++.|+++||.+.|+. .++++||++. +.+++++++++|+++
T Consensus 313 ~~~~~~l~~~gv~v~~g~~f~~~~~iRi~~~---~~~~~~~l~~al~~~ 358 (359)
T PRK03158 313 NELFEALLKKGYIVRSGAALGFPTGVRITIG---LKEQNDKIIELLKEL 358 (359)
T ss_pred HHHHHHHHHCCeEEeeCCCCCCCCeEEEecC---CHHHHHHHHHHHHHh
Confidence 889999999999999863 2467899644 889999999999875
No 114
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.94 E-value=6e-25 Score=217.23 Aligned_cols=310 Identities=18% Similarity=0.164 Sum_probs=211.7
Q ss_pred CEEEeeccCcccccCCCC-CHHHHHHHHHHHhhcccccC-----CCCCHHHHHHHHHHhhccCCCeEEecCCHHHHHHHH
Q 013008 98 REYLDLSSGIAVNALGHG-DADWIKAVVDQANVLTHVSN-----MYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAA 171 (451)
Q Consensus 98 ~~~iD~~~~~~~~~lG~~-~p~v~~a~~~~~~~~~~~~~-----~~~~~~~~~l~~~l~~~~~~e~v~~~~sG~eA~~~a 171 (451)
++|+.|+++.+ ||+. ||+|.++++++++++.+... ....+...++++.++++++.+..+++++|++++..+
T Consensus 1 ~~~~~~~~~~~---~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~iv~~sg~~a~~~~ 77 (349)
T cd06454 1 KKVLNFCSNDY---LGLANHPEVIEAAKEALDKYGVGAGGSRLISGTSDLHEELEEELAEFHGKEAALVFSSGYAANDGV 77 (349)
T ss_pred CCceecccCCc---cccCCCHHHHHHHHHHHHHhCCCCCCcCeecCCchHHHHHHHHHHHHhCCCCEEEeccHHHHHHHH
Confidence 46899999887 9996 99999999999987543211 134556889999999999877778888999999988
Q ss_pred HHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCC----CCe
Q 013008 172 IKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQP----GKT 247 (451)
Q Consensus 172 l~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~----~~~ 247 (451)
++.+.. +++.||+.++.|.. ........+. .+..++..|.+.++++++. .++
T Consensus 78 ~~~~~~-----------~gd~Vl~~~~~~~~-~~~~~~~~g~------------~~~~~~~~~~~~le~~i~~~~~~~~~ 133 (349)
T cd06454 78 LSTLAG-----------KGDLIISDSLNHAS-IIDGIRLSGA------------KKRIFKHNDMEDLEKLLREARRPYGK 133 (349)
T ss_pred HHHhcC-----------CCCEEEEehhhhHH-HHHHHHHcCC------------ceEEecCCCHHHHHHHHHHhhccCCC
Confidence 876541 57889988876543 3222222221 1223344578889888863 457
Q ss_pred EEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCccccc-cccccc---CCCccee--eecccccCCc
Q 013008 248 AAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYL-WAHEHY---GIFPDIM--TLAKPLAGGL 321 (451)
Q Consensus 248 aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~-~~~~~~---~~~pdi~--t~sK~lg~G~ 321 (451)
++|+++++++++|...+ +++|.++|++||+++|+||+|. +|..+.. ...... ....|++ +++|.+++
T Consensus 134 ~~v~~~~~~~~tG~~~~----~~~i~~~~~~~~~~livD~a~~-~g~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~-- 206 (349)
T cd06454 134 KLIVTEGVYSMDGDIAP----LPELVDLAKKYGAILFVDEAHS-VGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAFGA-- 206 (349)
T ss_pred eEEEEeccccCCCCccC----HHHHHHHHHHcCCEEEEEcccc-ccccCCCCCChhhhccccccCcEEEeechhhhcc--
Confidence 88899988888887766 8999999999999999999995 3322211 011111 1234554 78999975
Q ss_pred ccccccccHHHHhhccCCC--ccCCCCCcHHHHHHHHHHHHHhcC-hHHHHH-------H---HhCCCCcceecc-ccee
Q 013008 322 PIGAALVTEKVASAINYGD--HGSTFAGSPLVCNAAIAVLDKISN-PAFLAS-------K---LARNPHVKDVRG-LGLI 387 (451)
Q Consensus 322 ~iG~v~~~~~i~~~~~~~~--~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~-------~---~~~~~~~~~v~g-~G~~ 387 (451)
+.|++++++++++.+.... ...+.+.++..++++.++|+.+.+ +...++ + ++.+. +..+.. .+.+
T Consensus 207 ~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~g-~~~~~~~~~~~ 285 (349)
T cd06454 207 VGGYIAGSKELIDYLRSYARGFIFSTSLPPAVAAAALAALEVLQGGPERRERLQENVRYLRRGLKELG-FPVGGSPSHII 285 (349)
T ss_pred cCCEEECCHHHHHHHHHhchhhhccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcC-CcccCCCCCcE
Confidence 5588888999887765432 222335678888888999987654 222222 1 22222 111222 2333
Q ss_pred EEEEec--CChHHHHHHHHHCCceeeecCC------CCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 013008 388 IGIEFD--VSATPVVDACRDSGLLVLTAGK------GNVVRLVPPLIISEQELDQAVEILCKT 442 (451)
Q Consensus 388 ~~~~~~--~~~~~~~~~l~~~Gv~~~~~~~------~~~iri~~~~~~t~e~i~~~l~~l~~~ 442 (451)
.++.+. ....++.+.|.++||.+.+.+. ++.+|++++...+++++++++++|+++
T Consensus 286 ~~~~~~~~~~~~~~~~~L~~~gI~~~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 348 (349)
T cd06454 286 PPLIGDDPAKAVAFSDALLERGIYVQAIRYPTVPRGTARLRISLSAAHTKEDIDRLLEALKEV 348 (349)
T ss_pred EEEeCCChHHHHHHHHHHHhCCceEEEecCCccCCCCCeEEEEEeCCCCHHHHHHHHHHHHHh
Confidence 333332 3457899999999999876421 268999999889999999999999864
No 115
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.94 E-value=3.8e-25 Score=219.55 Aligned_cols=311 Identities=13% Similarity=0.146 Sum_probs=217.1
Q ss_pred CCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHhhccC--CCeEEecCCHHHHHHHHHH
Q 013008 96 EGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSF--ADRVFFSNTGTEANEAAIK 173 (451)
Q Consensus 96 ~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~e~v~~~~sG~eA~~~al~ 173 (451)
+++.+||+..|.. ++| .+|.+++++.+.+.... .++.....+|.+.++++++ .++|++++|+++++..+++
T Consensus 27 ~~~~~i~l~~nen--~~~-~~~~v~~a~~~~~~~~~----~Yp~~g~~~Lr~aia~~~~~~~~~I~vt~Gs~e~i~~~~~ 99 (366)
T PRK01533 27 GDHSFVKLASNEN--PFG-CSPRVLDELQKSWLDHA----LYPDGGATTLRQTIANKLHVKMEQVLCGSGLDEVIQIISR 99 (366)
T ss_pred CCCceEEeCCCCC--CCC-CCHHHHHHHHHHHHhcC----cCCCCCHHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHH
Confidence 3567899988765 566 67889999988765532 2333335678888888876 7899999999999999998
Q ss_pred HHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEc
Q 013008 174 FARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVE 253 (451)
Q Consensus 174 ~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~e 253 (451)
++. ++++.|++.+|+|.++...+...+ ..... .+...+ .-|+++|++.++++...++++.
T Consensus 100 ~l~-----------~~gd~vlv~~P~y~~~~~~~~~~g-~~v~~---v~~~~~-----~~d~~~l~~~~~~~~~~v~i~~ 159 (366)
T PRK01533 100 AVL-----------KAGDNIVTAGATFPQYRHHAIIEG-CEVKE---VALNNG-----VYDLDEISSVVDNDTKIVWICN 159 (366)
T ss_pred Hhc-----------CCCCEEEEcCCcHHHHHHHHHHcC-CEEEE---eecCCC-----CcCHHHHHHHhCcCCcEEEEeC
Confidence 764 168899999999988765543322 11111 111111 1278999998865444455555
Q ss_pred cccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCccccc-ccccc---cCCCcceeeeccccc-CCcccccccc
Q 013008 254 PIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYL-WAHEH---YGIFPDIMTLAKPLA-GGLPIGAALV 328 (451)
Q Consensus 254 p~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~-~~~~~---~~~~pdi~t~sK~lg-~G~~iG~v~~ 328 (451)
| ++++|. ..+.+.+++|.++|++++ ++|+||+|.+|-..+.. ..... .+...-+.+|||.+| +|+|+||+++
T Consensus 160 P-~NPTG~-~~~~~~l~~l~~~~~~~~-~~iiDe~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~i~ 236 (366)
T PRK01533 160 P-NNPTGT-YVNDRKLTQFIEGISENT-LIVIDEAYYEYVTAKDFPETLPLLEKHKNILVLRTFSKAYGLASFRVGYAVG 236 (366)
T ss_pred C-CCCCCC-CcCHHHHHHHHHhCCCCC-EEEEEccHHHhhccccCcchhHHhccCCCEEEEeCchHHhcChHHHHhHHhC
Confidence 5 444554 568899999999998877 56779999876432211 11111 111223347999999 7999999999
Q ss_pred cHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH--------------HHhCCCCcceecccceeEEEEecC
Q 013008 329 TEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS--------------KLARNPHVKDVRGLGLIIGIEFDV 394 (451)
Q Consensus 329 ~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~--------------~~~~~~~~~~v~g~G~~~~~~~~~ 394 (451)
++++++.+.... .+++.|++++.++.++|+ +.++.++ .++.+ .+....+.|.|+++.+.
T Consensus 237 ~~~~~~~l~~~~--~~~~~~~~~q~aa~~~l~---~~~~~~~~~~~~~~~r~~~~~~l~~~-g~~~~~~~~nf~~~~~~- 309 (366)
T PRK01533 237 HEELIEKLNVVR--LPFNVSSLAQKAATIAFG---DDEFIEEIVRVNTEGLRQYESFCKEN-EIPFYQSQTNFIFLPVE- 309 (366)
T ss_pred CHHHHHHHHHhc--CCCCcCHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHHHhC-CCccCCCcCcEEEEeCC-
Confidence 999999886432 457889999999998885 3333322 22222 23345677899999874
Q ss_pred ChHHHHHHHHHCCceeeecCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHhh
Q 013008 395 SATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTLPVLDS 448 (451)
Q Consensus 395 ~~~~~~~~l~~~Gv~~~~~~~~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~~~ 448 (451)
....+.+.|+++||.+.+. ++.+||+ ..+.++.++++++|+++++..+.
T Consensus 310 ~~~~~~~~l~~~GI~Vr~~--~~~iRis---~~~~~~~~~l~~al~~~~~~~~~ 358 (366)
T PRK01533 310 NGGEIYEACAHAGFIIRPF--PNGVRIT---VGTREQNEGVISVLQQHFENKKR 358 (366)
T ss_pred CHHHHHHHHHHCCcEEccC--CCceEEe---CCCHHHHHHHHHHHHHHHHhccc
Confidence 5678999999999999985 3678996 34889999999999999876543
No 116
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.94 E-value=2e-24 Score=216.27 Aligned_cols=320 Identities=19% Similarity=0.145 Sum_probs=212.7
Q ss_pred EEEeeccCcccccCCCCCHHHHHHHHHHHhhccccc--CCCCCHHHHHHHHHHhhccC----CCeEEecCCHHHHHHHHH
Q 013008 99 EYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVS--NMYYSIPQIELAKRLVACSF----ADRVFFSNTGTEANEAAI 172 (451)
Q Consensus 99 ~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~--~~~~~~~~~~l~~~l~~~~~----~e~v~~~~sG~eA~~~al 172 (451)
.+++|..|... ++ .++.+.+++.+.+.+....+ ..+..+.+..+++++.+.++ .+++++++|+++|+..++
T Consensus 25 ~~i~l~~g~~~--~~-~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~al~~~~ 101 (382)
T PRK06108 25 GVLPLWFGESD--LP-TPDFIRDAAAAALADGETFYTHNLGIPELREALARYVSRLHGVATPPERIAVTSSGVQALMLAA 101 (382)
T ss_pred CeEEecCCCCC--CC-CCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcCcceEEEeCChHHHHHHHH
Confidence 46888888763 43 47889999998876532211 12233446777777766554 689999999999999999
Q ss_pred HHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCC-CeeEeeCCCHHHHHHhcCCCCeEEEE
Q 013008 173 KFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMP-GVNFVEYGNIEATRKLIQPGKTAAVF 251 (451)
Q Consensus 173 ~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~le~~l~~~~~aavi 251 (451)
+.+.. +++.|++.+|+|..+.......+. .... .+... +..+ ..|+++|++.+.+ ++++|+
T Consensus 102 ~~l~~-----------~gd~vl~~~p~y~~~~~~~~~~g~-~~~~---v~~~~~~~~~--~~d~~~l~~~~~~-~~~~i~ 163 (382)
T PRK06108 102 QALVG-----------PGDEVVAVTPLWPNLVAAPKILGA-RVVC---VPLDFGGGGW--TLDLDRLLAAITP-RTRALF 163 (382)
T ss_pred HHhcC-----------CCCEEEEeCCCccchHHHHHHCCC-EEEE---eeCCCCCCCc--cCCHHHHHHhcCc-cceEEE
Confidence 86641 588999999999876543322221 1111 11111 0000 0278999998865 455555
Q ss_pred EccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcc-cccc-c-ccccCCCcc---eeeeccccc-CCcccc
Q 013008 252 VEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRT-GYLW-A-HEHYGIFPD---IMTLAKPLA-GGLPIG 324 (451)
Q Consensus 252 ~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~-G~~~-~-~~~~~~~pd---i~t~sK~lg-~G~~iG 324 (451)
++..++++|. .++.+.+++|.++|++||+++|+||+|.++... +... . .......+. +.+|||.++ +|+|+|
T Consensus 164 l~~p~NPtG~-~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG 242 (382)
T PRK06108 164 INSPNNPTGW-TASRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWRLG 242 (382)
T ss_pred EECCCCCCCc-ccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCCCcCCEEEEeechhhccCccccee
Confidence 5444555564 568999999999999999999999999887443 2111 1 111111122 348999997 589999
Q ss_pred cccccHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH--------------HHhCCCCcceeccc-ceeEE
Q 013008 325 AALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS--------------KLARNPHVKDVRGL-GLIIG 389 (451)
Q Consensus 325 ~v~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~--------------~~~~~~~~~~v~g~-G~~~~ 389 (451)
|+++++++++.+.......+.+.+++.+.++.++|+.. ++++++ .++.++.+....+. |+++|
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~g~~~~ 320 (382)
T PRK06108 243 WLVAPPALGQVLEKLIEYNTSCVAQFVQRAAVAALDEG--EDFVAELVARLRRSRDHLVDALRALPGVEVAKPDGAMYAF 320 (382)
T ss_pred eeeCCHHHHHHHHHHHHhcccCCChHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCeeEEEE
Confidence 99999999888764333345667889998888888632 222211 22344444434444 56667
Q ss_pred EEec--CChHHHHHHHH-HCCceeeecC-----CCCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q 013008 390 IEFD--VSATPVVDACR-DSGLLVLTAG-----KGNVVRLVPPLIISEQELDQAVEILCKTLP 444 (451)
Q Consensus 390 ~~~~--~~~~~~~~~l~-~~Gv~~~~~~-----~~~~iri~~~~~~t~e~i~~~l~~l~~~l~ 444 (451)
+.+. .+..++++.|+ ++||.+.|+. ..+++|+++.. +++++++++++|.++++
T Consensus 321 ~~l~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ris~~~--~~~~l~~~l~~l~~~l~ 381 (382)
T PRK06108 321 FRIPGVTDSLALAKRLVDEAGLGLAPGTAFGPGGEGFLRWCFAR--DPARLDEAVERLRRFLA 381 (382)
T ss_pred EeCCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC--CHHHHHHHHHHHHHHHh
Confidence 7774 34678888886 5799998753 13679997776 89999999999998874
No 117
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.94 E-value=8.4e-25 Score=220.07 Aligned_cols=317 Identities=15% Similarity=0.096 Sum_probs=212.2
Q ss_pred CCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcc-cccC-CCCCHHHHHHHHHHhhccC----C-CeEEecCCHHHHHH
Q 013008 97 GREYLDLSSGIAVNALGHGDADWIKAVVDQANVLT-HVSN-MYYSIPQIELAKRLVACSF----A-DRVFFSNTGTEANE 169 (451)
Q Consensus 97 G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~-~~~~-~~~~~~~~~l~~~l~~~~~----~-e~v~~~~sG~eA~~ 169 (451)
|.+++||..|... ++ .++.+.+++.+.+.+.. +.+. .+....+..+++++.+..+ . ++|++|+|+++|+.
T Consensus 31 ~~~~i~l~~g~p~--~~-~~~~~~~~~~~~~~~~~~~~y~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al~ 107 (399)
T PRK07681 31 GHKMIDLSIGNPD--MP-PADFVREEMVHTANQKESYGYTLSGIQEFHEAVTEYYNNTHNVILNADKEVLLLMGSQDGLV 107 (399)
T ss_pred CCCeEEeCCCCCC--CC-CCHHHHHHHHHHHhccccCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCeEEECCCcHHHHH
Confidence 5678999888652 43 56888899888775422 1111 2223336667777765533 5 68999999999999
Q ss_pred HHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEE
Q 013008 170 AAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAA 249 (451)
Q Consensus 170 ~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aa 249 (451)
.++++.. .++|.|++.+|+|.++.......+.... . .+..++..+. .|++++++.+.+ ++++
T Consensus 108 ~~~~~~~-----------~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~-~---v~~~~~~~~~--~d~~~l~~~~~~-~~k~ 169 (399)
T PRK07681 108 HLPMVYA-----------NPGDIILVPDPGYTAYETGIQMAGATSY-Y---MPLKKENDFL--PDLELIPEEIAD-KAKM 169 (399)
T ss_pred HHHHHhC-----------CCCCEEEECCCCccchHHHHHhcCCEEE-E---EecCCCCCCc--CCHHHHHHhccc-cceE
Confidence 9888654 2689999999999888755443332211 1 1111111010 278889888754 4555
Q ss_pred EEEc-cccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccc-c-ccc---cCCCcceeeeccccc-CCcc
Q 013008 250 VFVE-PIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLW-A-HEH---YGIFPDIMTLAKPLA-GGLP 322 (451)
Q Consensus 250 vi~e-p~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~-~-~~~---~~~~pdi~t~sK~lg-~G~~ 322 (451)
|++. |.| ++| .+.+++.+++|.++|++||++||+||+|.+|-..+... . ... .+....+.+|||.++ .|+|
T Consensus 170 v~l~~P~N-PTG-~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR 247 (399)
T PRK07681 170 MILNFPGN-PVP-AMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPGAKEVGVEINSLSKSYSLAGSR 247 (399)
T ss_pred EEEeCCCC-CcC-cCCCHHHHHHHHHHHHHcCeEEEEeccchhheeCCCCCCChhhCCCCcccEEEEeecccccCCccce
Confidence 5555 644 445 46799999999999999999999999998874333211 1 111 112233558999998 7999
Q ss_pred cccccccHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH--------------HHhCCCCccee-ccccee
Q 013008 323 IGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS--------------KLARNPHVKDV-RGLGLI 387 (451)
Q Consensus 323 iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~--------------~~~~~~~~~~v-~g~G~~ 387 (451)
+||+++++++++.+........++.+.+.+.++.++|+. .+.++++ .++.++ +... ...|++
T Consensus 248 iG~~i~~~~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~p~~g~f 324 (399)
T PRK07681 248 IGYMIGNEEIVRALTQFKSNTDYGVFLPIQKAACAALRN--GAAFCEKNRGIYQERRDTLVDGFRTFG-WNVDKPAGSMF 324 (399)
T ss_pred eEEEecCHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhC--cHHHHHHHHHHHHHHHHHHHHHHHHCC-CcccCCCeeeE
Confidence 999999999998886443344567788888888888863 1223222 223332 2222 334788
Q ss_pred EEEEec--CChHHHHHHHHH-CCceeeecCC-----CCEEEEeCCCCCCHHHHHHHHHHHHH
Q 013008 388 IGIEFD--VSATPVVDACRD-SGLLVLTAGK-----GNVVRLVPPLIISEQELDQAVEILCK 441 (451)
Q Consensus 388 ~~~~~~--~~~~~~~~~l~~-~Gv~~~~~~~-----~~~iri~~~~~~t~e~i~~~l~~l~~ 441 (451)
+|+.+. ....++++.|++ +||.+.|+.. .+++|++.. .+++++++++++|++
T Consensus 325 ~~~~l~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~--~~~~~~~~~l~~l~~ 384 (399)
T PRK07681 325 VWAEIPKGWTSLSFAYALMDRANVVVTPGHAFGPHGEGFVRIALV--QDEEVLQQAVENIRN 384 (399)
T ss_pred EEEECCCCCCHHHHHHHHHHhCCEEEeCChhhCcCCCCeEEEEec--CCHHHHHHHHHHHHH
Confidence 888874 356789999887 8999988631 257888654 688999999999998
No 118
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.94 E-value=6.8e-25 Score=222.91 Aligned_cols=337 Identities=15% Similarity=0.061 Sum_probs=214.3
Q ss_pred eEEEeecccEEEecC----------CCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccc-cCCCCCHHHHHHHHHHh
Q 013008 82 VVLASGKGCKLYDAE----------GREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHV-SNMYYSIPQIELAKRLV 150 (451)
Q Consensus 82 ~~~~~~~G~~l~d~~----------G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~-~~~~~~~~~~~l~~~l~ 150 (451)
+....++|.+|...+ +...+||..|.. .....|.+.+++.+.......+ ...+..+.+..+++++.
T Consensus 59 i~~~~~~G~~v~~~~~~~~~~~~~~~~~~i~L~~g~p---~~~~~p~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~ 135 (431)
T PRK15481 59 AQSQGRNGTVIRGSPSPVALEGGDPGTPLHDLAGGNP---DPQRLPDLSRYFARLSRTPRLYGDAPVSPELHAWAARWLR 135 (431)
T ss_pred EEEeCCCceEEccCcchhhhcccCCcchhhhhhcCCC---ChhHhHHHHHHHHHhhhhhhhcCCcCCCHHHHHHHHHHHh
Confidence 344556777664321 223566655533 1112356777777655432211 11111222334444433
Q ss_pred hccC-CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeE
Q 013008 151 ACSF-ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNF 229 (451)
Q Consensus 151 ~~~~-~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (451)
...+ .++|++|+|+++|+..+++++. +++|.|++.+|+|.++...+...+.... . .+...+.
T Consensus 136 ~~~~~~~~Iiit~G~~~al~~~~~~l~-----------~pgd~Vlv~~P~y~~~~~~~~~~g~~~~-~---v~~~~~g-- 198 (431)
T PRK15481 136 DDCPVAFEIDLTSGAIDAIERLLCAHL-----------LPGDSVAVEDPCFLSSINMLRYAGFSAS-P---VSVDAEG-- 198 (431)
T ss_pred hccCCcCeEEEecCcHHHHHHHHHHhC-----------CCCCEEEEeCCCcHHHHHHHHHcCCeEE-e---eccCCCC--
Confidence 3223 4589999999999999999665 2689999999999888655544332211 1 1111110
Q ss_pred eeCCCHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHh-CCEEEEeccccCCCccccccccc-ccCCC
Q 013008 230 VEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDA-GALLVFDEVQCGLGRTGYLWAHE-HYGIF 307 (451)
Q Consensus 230 ~~~~d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~-g~llI~DEv~tg~gr~G~~~~~~-~~~~~ 307 (451)
-|+++|+++++. +++++++.|..+|+.+..++.+.+++|.++|++| +++||+||+|..|...+...... .....
T Consensus 199 ---~~~~~l~~~~~~-~~k~i~~~p~p~NPTG~~~s~~~~~~l~~la~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~v 274 (431)
T PRK15481 199 ---MQPEKLERALAQ-GARAVILTPRAHNPTGCSLSARRAAALRNLLARYPQVLVIIDDHFALLSSSPYHSVIPQTTQRW 274 (431)
T ss_pred ---CCHHHHHHHHhc-CCCEEEECCCCCCCCCccCCHHHHHHHHHHHHhcCCceEEecCchhhhccCCCCCCCcCCCCCE
Confidence 278999998865 4666666654333333567999999999999999 99999999998874322111111 11112
Q ss_pred cceeeecccccCCcccccccccHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH--------------HHh
Q 013008 308 PDIMTLAKPLAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS--------------KLA 373 (451)
Q Consensus 308 pdi~t~sK~lg~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~--------------~~~ 373 (451)
.-+.+|||.++.|+|+||+++++++++.+.......+++.+.+++.++.++|+.-.-..++++ .++
T Consensus 275 i~~~SfSK~~~~GlRiG~~i~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~l~~~~~~~~~~r~~~~~~L~ 354 (431)
T PRK15481 275 ALIRSVSKALGPDLRLAFVASDSATSARLRLRLNSGTQWVSHLLQDLVYACLTDPEYQARLAQARLFYAQRRQKLARALQ 354 (431)
T ss_pred EEEeeeccccCCCceeEEEeCCHHHHHHHHHHHhccccCCCHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 234489999999999999999999988885433334456788999999988873211122222 122
Q ss_pred CCCCcce-ecccceeEEEEecCChHHHHHHHHHCCceeeecCC------CCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q 013008 374 RNPHVKD-VRGLGLIIGIEFDVSATPVVDACRDSGLLVLTAGK------GNVVRLVPPLIISEQELDQAVEILCKTLP 444 (451)
Q Consensus 374 ~~~~~~~-v~g~G~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~------~~~iri~~~~~~t~e~i~~~l~~l~~~l~ 444 (451)
.+. +.. .+..|+++|+.+.....++++.|.++||.+.|+.. ++.+|+++.. .+++++++++++|.+++.
T Consensus 355 ~~~-~~~~~p~gg~f~~~~l~~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~iRis~~~-~~~~~i~~~~~~l~~~~~ 430 (431)
T PRK15481 355 QYG-IAIPSPGDGLNLWLPLDTDSQATALTLAKSGWLVREGEAFGVSAPSHGLRITLST-LNDAEINRLAADLHQALN 430 (431)
T ss_pred HcC-CccccCCCeEEEEEECCCCHHHHHHHHHHCCcEEecCCccccCCCCCeEEEEcCC-CChHHHHHHHHHHHHHhc
Confidence 222 222 34568899998855567899999999999998531 2478997664 478999999999998874
No 119
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.94 E-value=1.3e-24 Score=217.88 Aligned_cols=321 Identities=16% Similarity=0.098 Sum_probs=204.4
Q ss_pred CCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhccc-cc--CCCCCHHHHHHHHHHhhccC----CC-eEEecCCHHHH
Q 013008 96 EGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTH-VS--NMYYSIPQIELAKRLVACSF----AD-RVFFSNTGTEA 167 (451)
Q Consensus 96 ~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~-~~--~~~~~~~~~~l~~~l~~~~~----~e-~v~~~~sG~eA 167 (451)
+|+.++||..|.. .++ .+|.+.+++.+.+..... .+ ..+....+..+++++.+..+ .+ .|++|+|+++|
T Consensus 28 ~~~~~i~l~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~Gs~~a 104 (388)
T PRK07366 28 AGKELIDLSLGSS--DLP-APAHALEAIAQSLHDPSTHGYLLFHGTLDFREAAAQWYEQRFGLAVDPETEVLPLIGSQEG 104 (388)
T ss_pred cCCCeEEeCCCCC--CCC-CCHHHHHHHHHHHhCcccCCCCCCCCCHHHHHHHHHHHHHhhCCcCCCcCeEEECCCcHHH
Confidence 4667889888765 344 478899999887754211 11 11122335566666655433 55 69999999999
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCe
Q 013008 168 NEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKT 247 (451)
Q Consensus 168 ~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~ 247 (451)
+..+++++. +++|.|++.+|+|.++...+...+.... . .+..+...+. .|++++++.+.+ ++
T Consensus 105 l~~~~~~l~-----------~~gd~Vlv~~P~y~~~~~~~~~~g~~~~-~---v~~~~~~~~~--~d~~~l~~~~~~-~~ 166 (388)
T PRK07366 105 TAHLPLAVL-----------NPGDFALLLDPGYPSHAGGVYLAGGQIY-P---MPLRAENDFL--PVFADIPTEVLA-QA 166 (388)
T ss_pred HHHHHHHhC-----------CCCCEEEEcCCCCcchHHHHHhcCCEEE-E---EECCCccCCC--CCHHHHHHhhcc-cc
Confidence 999988655 2689999999999988655444332211 1 1111111111 267788776654 34
Q ss_pred EEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCccccc--ccccccC----CCcceeeeccccc-CC
Q 013008 248 AAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYL--WAHEHYG----IFPDIMTLAKPLA-GG 320 (451)
Q Consensus 248 aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~--~~~~~~~----~~pdi~t~sK~lg-~G 320 (451)
++|++.+.++++|. +.+.+.+++|.++|++||++||+||+|..|...+.. ....... ....+.+|||.+| .|
T Consensus 167 k~i~l~~p~NPTG~-~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~~G 245 (388)
T PRK07366 167 RLMVLSYPHNPTTA-IAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADPEKSVSIEFFTLSKSYNMGG 245 (388)
T ss_pred eEEEEeCCCCCCCc-cCCHHHHHHHHHHHHHcCeEEEEecchhhcccCCCCCCCChhhCCCCcccEEEEeecccccCCcc
Confidence 55555555555554 679999999999999999999999999887443321 1111111 1223348999997 79
Q ss_pred cccccccccHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH--------------HHhCCCCcceecccce
Q 013008 321 LPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS--------------KLARNPHVKDVRGLGL 386 (451)
Q Consensus 321 ~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~--------------~~~~~~~~~~v~g~G~ 386 (451)
+|+||+++++++++.+........++..+..+.++.+++. ..++++++ .++++......+..|+
T Consensus 246 lRiG~~v~~~~li~~l~~~~~~~~~~~~~~~~~~a~~~l~--~~~~~l~~~~~~~~~~r~~l~~~L~~~~~~~~~p~~g~ 323 (388)
T PRK07366 246 FRIGFAIGNAQLIQALRQVKAVVDFNQYRGILNGAIAALT--GPQATVQQTVQIFRQRRDAFINALHQIGWPVPLPEATM 323 (388)
T ss_pred hhheehcCCHHHHHHHHHHHhhcccCCCHHHHHHHHHHHh--CcHHHHHHHHHHHHHHHHHHHHHHHHCCCcccCCCeeE
Confidence 9999999999999887643333333333333445555553 22333332 2233332112345688
Q ss_pred eEEEEecC----ChHHHHHHHH-HCCceeeecC---C--CCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 013008 387 IIGIEFDV----SATPVVDACR-DSGLLVLTAG---K--GNVVRLVPPLIISEQELDQAVEILCKT 442 (451)
Q Consensus 387 ~~~~~~~~----~~~~~~~~l~-~~Gv~~~~~~---~--~~~iri~~~~~~t~e~i~~~l~~l~~~ 442 (451)
++|+.+.. +..++++.|+ ++||.+.|+. . .+++|++.. .+++++++++++|.++
T Consensus 324 f~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~--~~~~~l~~~l~rl~~~ 387 (388)
T PRK07366 324 YVWAKLPEPWQGNSVEFCTQLVAQTGVAASPGSGFGKSGEGYVRFALV--HDPDILEEAVERIAAF 387 (388)
T ss_pred EEEEECCcccCCCHHHHHHHHHHhCCEEEeCchHhCcCCCCeEEEEec--CCHHHHHHHHHHHHHh
Confidence 88888742 3577888775 6799999862 1 257888654 5799999999999875
No 120
>PLN00175 aminotransferase family protein; Provisional
Probab=99.94 E-value=1.7e-24 Score=218.41 Aligned_cols=319 Identities=18% Similarity=0.175 Sum_probs=212.6
Q ss_pred CEEEeeccCcccccCCCCCHHHHHHHHHHHhhccccc--CCCCCHHHHHHHHHHhhccC----CC-eEEecCCHHHHHHH
Q 013008 98 REYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVS--NMYYSIPQIELAKRLVACSF----AD-RVFFSNTGTEANEA 170 (451)
Q Consensus 98 ~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~--~~~~~~~~~~l~~~l~~~~~----~e-~v~~~~sG~eA~~~ 170 (451)
...|||..|.+. +. .++.+.+++.+.+++....+ ..+..+.+..+++++.+..+ .+ +|++|+|+++|+..
T Consensus 54 ~~~i~l~~G~P~--~~-~~~~~~~~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~~I~vt~G~~~al~~ 130 (413)
T PLN00175 54 HGAINLGQGFPN--FD-GPDFVKEAAIQAIRDGKNQYARGFGVPELNSAIAERFKKDTGLVVDPEKEVTVTSGCTEAIAA 130 (413)
T ss_pred CCeEecCCCCCC--CC-CCHHHHHHHHHHHhcCCCCcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCHHHHHHH
Confidence 357899888763 32 47889999998887521111 11222335666666665544 44 69999999999999
Q ss_pred HHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEE
Q 013008 171 AIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAV 250 (451)
Q Consensus 171 al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aav 250 (451)
+++... +++|.|++.+|+|..+.......+.... . .+..+.. + .-|++.|++.+.+ ++++|
T Consensus 131 ~~~~l~-----------~~gd~Vlv~~P~y~~~~~~~~~~g~~~~-~---v~~~~~~-~--~~~~~~l~~~~~~-~~k~i 191 (413)
T PLN00175 131 TILGLI-----------NPGDEVILFAPFYDSYEATLSMAGAKIK-T---VTLRPPD-F--AVPEDELKAAFTS-KTRAI 191 (413)
T ss_pred HHHHhC-----------CCCCEEEEeCCCchhHHHHHHHcCCEEE-E---EECCccc-C--CCCHHHHHHhcCc-CceEE
Confidence 888654 2689999999999877544333222111 1 1111110 0 1278999999875 45666
Q ss_pred EEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCccccccc-ccccCC---Ccceeeeccccc-CCccccc
Q 013008 251 FVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWA-HEHYGI---FPDIMTLAKPLA-GGLPIGA 325 (451)
Q Consensus 251 i~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~-~~~~~~---~pdi~t~sK~lg-~G~~iG~ 325 (451)
++.+.++++|. +++.+.+++|.++|++||+++|+||+|..+.+.+.... .+..+. ...+.+|||.++ .|+|+||
T Consensus 192 ~i~~p~NPtG~-~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~s~~~~~~~~~~vi~i~SfSK~~~~~G~RiG~ 270 (413)
T PLN00175 192 LINTPHNPTGK-MFTREELELIASLCKENDVLAFTDEVYDKLAFEGDHISMASLPGMYERTVTMNSLGKTFSLTGWKIGW 270 (413)
T ss_pred EecCCCCCCCc-CCCHHHHHHHHHHHHHcCcEEEEecccCccccCCcccChhhCCCCcCcEEEEecchhhccCcchheee
Confidence 66555555564 67899999999999999999999999988744332111 111121 223447999998 7999999
Q ss_pred ccccHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH--------------HHhCCCCcceeccc-ceeEEE
Q 013008 326 ALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS--------------KLARNPHVKDVRGL-GLIIGI 390 (451)
Q Consensus 326 v~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~--------------~~~~~~~~~~v~g~-G~~~~~ 390 (451)
+++++++++.+.......+++.+++.+.++.++|+. .+.++++ .++.++ +....+. |+++|+
T Consensus 271 ~v~~~~l~~~l~~~~~~~~~~~s~~~Q~a~~~~l~~--~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~p~g~~f~~~ 347 (413)
T PLN00175 271 AIAPPHLTWGVRQAHSFLTFATATPMQWAAVAALRA--PESYYEELKRDYSAKKDILVEGLKEVG-FKVYPSSGTYFVMV 347 (413)
T ss_pred eEeCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhC--CHHHHHHHHHHHHHHHHHHHHHHHHCC-CeecCCCeeEEEEE
Confidence 999999998876544445678889999999888863 2233222 222232 3323343 556777
Q ss_pred Eec---C-ChHHHHHHHH-HCCceeeecC-------C-CCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q 013008 391 EFD---V-SATPVVDACR-DSGLLVLTAG-------K-GNVVRLVPPLIISEQELDQAVEILCKTLP 444 (451)
Q Consensus 391 ~~~---~-~~~~~~~~l~-~~Gv~~~~~~-------~-~~~iri~~~~~~t~e~i~~~l~~l~~~l~ 444 (451)
.+. . ...++++.|+ ++||.+.|+. . .+.+||+.. .++|++++++++|.++++
T Consensus 348 ~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~~~iRls~~--~~~e~l~~~~~rL~~~~~ 412 (413)
T PLN00175 348 DHTPFGFENDIAFCEYLIEEVGVAAIPPSVFYLNPEDGKNLVRFAFC--KDEETLRAAVERMKTKLK 412 (413)
T ss_pred eccccCCCCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCCEEEEEEc--CCHHHHHHHHHHHHHHHh
Confidence 762 2 3568999887 4699998862 1 257888655 589999999999998875
No 121
>PRK08960 hypothetical protein; Provisional
Probab=99.94 E-value=2.7e-24 Score=215.63 Aligned_cols=321 Identities=15% Similarity=0.098 Sum_probs=213.2
Q ss_pred CCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccc--cCCCCCHHHHHHHHHHhhcc----CCCeEEecCCHHHHHHH
Q 013008 97 GREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHV--SNMYYSIPQIELAKRLVACS----FADRVFFSNTGTEANEA 170 (451)
Q Consensus 97 G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~--~~~~~~~~~~~l~~~l~~~~----~~e~v~~~~sG~eA~~~ 170 (451)
|..++++..|... ++ .++.+.+++.+.+...... ...+..+.+..+++.+.+.+ ..++|++|+|+++|+..
T Consensus 31 ~~~~i~l~~g~~~--~~-~~~~v~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~ 107 (387)
T PRK08960 31 GHDVIHLEIGEPD--FT-TAEPIVAAGQAALAAGHTRYTAARGLPALREAIAGFYAQRYGVDVDPERILVTPGGSGALLL 107 (387)
T ss_pred CCCeEEeCCCCCC--CC-CCHHHHHHHHHHHhcCCCccCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccCcHHHHHH
Confidence 4567888887663 33 4788999999887642111 11122233556666665443 37899999999999999
Q ss_pred HHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEE
Q 013008 171 AIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAV 250 (451)
Q Consensus 171 al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aav 250 (451)
++++.. +++|.|++.+|+|.++.......+. .... .+...+..+ .-|++.+++.++++...++
T Consensus 108 ~~~~~~-----------~~gd~vlv~~p~y~~~~~~~~~~g~-~~~~---v~~~~~~~~--~~d~~~l~~~~~~~~~~i~ 170 (387)
T PRK08960 108 ASSLLV-----------DPGKHWLLADPGYPCNRHFLRLVEG-AAQL---VPVGPDSRY--QLTPALVERHWNADTVGAL 170 (387)
T ss_pred HHHHhc-----------CCCCEEEEcCCCCcchHHHHHhcCC-eEEE---EecCcccCC--CCCHHHHHHHhCccceEEE
Confidence 988654 2689999999999887654433221 1111 111111000 0278999998876556667
Q ss_pred EEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccccccCCCccee---eeccccc-CCcccccc
Q 013008 251 FVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIM---TLAKPLA-GGLPIGAA 326 (451)
Q Consensus 251 i~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~---t~sK~lg-~G~~iG~v 326 (451)
++.|.|+ +| ..++.+.+++|+++|++||+++|+||+|.++...+... ......++++ +|||.+| .|+|+||+
T Consensus 171 i~~p~NP-tG-~~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~~~~--~~~~~~~~vi~~~S~SK~~g~~GlRiG~~ 246 (387)
T PRK08960 171 VASPANP-TG-TLLSRDELAALSQALRARGGHLVVDEIYHGLTYGVDAA--SVLEVDDDAFVLNSFSKYFGMTGWRLGWL 246 (387)
T ss_pred EECCCCC-CC-cCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCC--ChhhccCCEEEEeecccccCCcccEEEEE
Confidence 7777554 44 45789999999999999999999999998874332211 1123334544 6899997 79999999
Q ss_pred cccHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH--------------HHhCCCCcc-eecccceeEEEE
Q 013008 327 LVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS--------------KLARNPHVK-DVRGLGLIIGIE 391 (451)
Q Consensus 327 ~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~--------------~~~~~~~~~-~v~g~G~~~~~~ 391 (451)
++++++++.+.......+.+.+.+.+.++.++++. ...+++++ .++.++... ..+..|+++|++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~-~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~g~~f~~~~ 325 (387)
T PRK08960 247 VAPPAAVPELEKLAQNLYISASTPAQHAALACFEP-ETLAILEARRAEFARRRDFLLPALRELGFGIAVEPQGAFYLYAD 325 (387)
T ss_pred EcCHHHHHHHHHHHhhhccCCCHHHHHHHHHHhhc-CcHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCcCCCeeEEEEEe
Confidence 99999998876544445566788998888888752 11222222 223333211 124457788888
Q ss_pred ec---CChHHHHHHHH-HCCceeeecC---C---CCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q 013008 392 FD---VSATPVVDACR-DSGLLVLTAG---K---GNVVRLVPPLIISEQELDQAVEILCKTLP 444 (451)
Q Consensus 392 ~~---~~~~~~~~~l~-~~Gv~~~~~~---~---~~~iri~~~~~~t~e~i~~~l~~l~~~l~ 444 (451)
+. .+..++++.|+ ++||.+.|+. . ++++|+++.. +.+++.+++++|.++++
T Consensus 326 ~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~iRi~~~~--~~~~l~~al~~l~~~~~ 386 (387)
T PRK08960 326 ISAFGGDAFAFCRHFLETEHVAFTPGLDFGRHQAGQHVRFAYTQ--SLPRLQEAVERIARGLR 386 (387)
T ss_pred ccccCCCHHHHHHHHHHhCCEEEcCchHhCCCCCCCeEEEEecC--CHHHHHHHHHHHHHHHh
Confidence 73 35677888876 5799999862 1 2578987663 78899999999988764
No 122
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=99.94 E-value=3.9e-24 Score=215.04 Aligned_cols=322 Identities=16% Similarity=0.039 Sum_probs=208.2
Q ss_pred CCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhccccc-CCCCCHHHHHHHHHHhhccC-----CC-eEEecCCHHHHH
Q 013008 96 EGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVS-NMYYSIPQIELAKRLVACSF-----AD-RVFFSNTGTEAN 168 (451)
Q Consensus 96 ~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~-~~~~~~~~~~l~~~l~~~~~-----~e-~v~~~~sG~eA~ 168 (451)
.|+++|||..|... ++ .++.+.+++.+.+.....+. ..+....+..+++++.+.++ .+ +|++|+|+++|+
T Consensus 27 ~~~~~i~l~~~~p~--~~-~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al 103 (396)
T PRK09147 27 ADLPPISLSIGEPK--HP-TPAFIKDALAANLDGLASYPTTAGLPALREAIAAWLERRYGLPALDPATQVLPVNGSREAL 103 (396)
T ss_pred cCCCeEecCCCCCC--CC-CCHHHHHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHHHHhCCCcCCccceEEECCChHHHH
Confidence 47889999888763 43 46788888887665432211 11223346677777765544 24 899999999999
Q ss_pred HHHHHHHHHHhhhcCCCCCCC---CceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCC
Q 013008 169 EAAIKFARKFQRHSNPDSKEP---ATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPG 245 (451)
Q Consensus 169 ~~al~~a~~~~~~~~~~~~~~---~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~ 245 (451)
..+++++.. + ++.|++.+|+|.++.......+.. ... .|..++..+. -|++++++.+.+
T Consensus 104 ~~~~~~l~~-----------~~~~gd~vlv~~P~y~~~~~~~~~~g~~-~~~---vp~~~~~~~~--~d~~~l~~~~~~- 165 (396)
T PRK09147 104 FAFAQTVID-----------RDGPGPLVVCPNPFYQIYEGAALLAGAE-PYF---LNCDPANNFA--PDFDAVPAEVWA- 165 (396)
T ss_pred HHHHHHHcC-----------CCCCCCEEEEcCCCccchHHHHHhcCCE-EEE---eccCccccCc--cCHHHHHHHHhh-
Confidence 999996652 4 788999999998876544333221 111 1221111010 278889877754
Q ss_pred CeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccc--ccc-c---ccc-----CCCcceeeec
Q 013008 246 KTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGY--LWA-H---EHY-----GIFPDIMTLA 314 (451)
Q Consensus 246 ~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~--~~~-~---~~~-----~~~pdi~t~s 314 (451)
+++++++...++++| .+++++.+++|.++|++|+++||+||+|..|...+. ... . ... +...-+.+||
T Consensus 166 ~~k~i~l~nP~NPTG-~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~S 244 (396)
T PRK09147 166 RTQLLFVCSPGNPTG-AVLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKRLVVFHSLS 244 (396)
T ss_pred ccEEEEEcCCCCCcC-ccCCHHHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhccccCccccccEEEEeccc
Confidence 445555443344444 467999999999999999999999999987743331 111 1 011 1122244799
Q ss_pred cccc-CCcccccccccHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH-----------HHhCCC-Ccce-
Q 013008 315 KPLA-GGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS-----------KLARNP-HVKD- 380 (451)
Q Consensus 315 K~lg-~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~-----------~~~~~~-~~~~- 380 (451)
|.++ .|+|+||+++++++++.+.......+++.+++.+.++.+++. .++++++ +.+.+. .+..
T Consensus 245 K~~~~~GlRiG~~~~~~~l~~~~~~~~~~~~~~~~~~~q~a~~~~~~---~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~ 321 (396)
T PRK09147 245 KRSNVPGLRSGFVAGDAALLKKFLLYRTYHGCAMPPAVQAASIAAWN---DEAHVRENRALYREKFDAVTPILAPVLDVQ 321 (396)
T ss_pred cccCCccceeeeecCCHHHHHHHHHHhhhcccCCCHHHHHHHHHHhc---chhHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 9986 589999999999999887643333456678888888777763 2222221 111111 1221
Q ss_pred ecccceeEEEEecCChHHHHHHHH-HCCceeeecCC-----------CCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q 013008 381 VRGLGLIIGIEFDVSATPVVDACR-DSGLLVLTAGK-----------GNVVRLVPPLIISEQELDQAVEILCKTLP 444 (451)
Q Consensus 381 v~g~G~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~~~-----------~~~iri~~~~~~t~e~i~~~l~~l~~~l~ 444 (451)
....|+++|+++.....++++.|+ ++||.+.|+.. .+.+|+++ +.+++++++++++|.++++
T Consensus 322 ~p~~g~f~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~~~~~iRi~~--~~~~~~l~~~l~rl~~~~~ 395 (396)
T PRK09147 322 LPDAGFYLWAKVPGDDTEFARRLYADYNVTVLPGSYLAREAHGVNPGAGRVRIAL--VAPLAECVEAAERIVDFCR 395 (396)
T ss_pred CCCeeEEEEEECCCCHHHHHHHHHHhCCEEEeCCccccccccCCCCCCCeEEEEe--cCCHHHHHHHHHHHHHHhc
Confidence 245688899888645677888886 67999987631 25677754 4578999999999998763
No 123
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.93 E-value=4.4e-24 Score=212.51 Aligned_cols=308 Identities=17% Similarity=0.183 Sum_probs=210.5
Q ss_pred EEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHhhccC--CCeEEecCCHHHHHHHHHHHHH
Q 013008 99 EYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSF--ADRVFFSNTGTEANEAAIKFAR 176 (451)
Q Consensus 99 ~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~e~v~~~~sG~eA~~~al~~a~ 176 (451)
.++++..|.. .+| .+|++.+++.+.+..... |+.....+|.+.++++++ .++|++++|+++++..+++++.
T Consensus 33 ~~~~l~~~~~--~~~-~~~~~~~a~~~~~~~~~~----Y~~~~~~~Lr~~ia~~~~~~~~~I~it~G~~~~l~~~~~~~~ 105 (369)
T PRK08153 33 FRARIGANES--GFG-PSPSVIAAMREAAAEIWK----YGDPENHDLRHALAAHHGVAPENIMVGEGIDGLLGLIVRLYV 105 (369)
T ss_pred ceeEecCCCC--CCC-CCHHHHHHHHHHHHHhhc----CCCCccHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhc
Confidence 4578887754 455 678899999887654221 222225678888888876 6799999999999999888654
Q ss_pred HHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEE-EEccc
Q 013008 177 KFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAV-FVEPI 255 (451)
Q Consensus 177 ~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aav-i~ep~ 255 (451)
++++.|++.+|+|+++.......+.. ... .|...+ ..|++++++.+...++++| +++|.
T Consensus 106 -----------~~gd~vlv~~p~y~~~~~~~~~~g~~-~~~---vp~~~~-----~~~~~~l~~~~~~~~~~~i~l~~P~ 165 (369)
T PRK08153 106 -----------EPGDPVVTSLGAYPTFNYHVAGFGGR-LVT---VPYRDD-----REDLDALLDAARRENAPLVYLANPD 165 (369)
T ss_pred -----------CCCCEEEECCCcchHHHHHHHHcCCe-EEE---eeCCCC-----CCCHHHHHHHhcccCCcEEEEeCCC
Confidence 26899999999998776433222211 111 011111 1267888776654445555 44665
Q ss_pred cCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccccccCCCcc---eeeeccccc-CCcccccccccHH
Q 013008 256 QGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPD---IMTLAKPLA-GGLPIGAALVTEK 331 (451)
Q Consensus 256 ~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pd---i~t~sK~lg-~G~~iG~v~~~~~ 331 (451)
|++ |. +.+.+.+++|.++|++ +++||+||+|..|++.|...... ...++ +.+|||.+| +|+|+||++++++
T Consensus 166 NPt-G~-~~~~~~l~~l~~~~~~-~~~lI~DE~y~~~~~~~~~~~~~--~~~~~~i~~~SfSK~~g~~GlRiG~~v~~~~ 240 (369)
T PRK08153 166 NPM-GS-WHPAADIVAFIEALPE-TTLLVLDEAYCETAPAGAAPPID--TDDPNVIRMRTFSKAYGLAGARVGYAIGAPG 240 (369)
T ss_pred CCC-CC-CCCHHHHHHHHHhCCC-CcEEEEeCchhhhcCcccchhhh--hcCCCEEEEecchHhccCcchheeeeecCHH
Confidence 555 54 5688889999998874 99999999998886544321111 12234 348999998 7999999999999
Q ss_pred HHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH--------------HHhCCCCcceecccceeEEEEec---C
Q 013008 332 VASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS--------------KLARNPHVKDVRGLGLIIGIEFD---V 394 (451)
Q Consensus 332 i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~--------------~~~~~~~~~~v~g~G~~~~~~~~---~ 394 (451)
+++.+.... .+++.|+++++++.++|+ +++++++ .++..+ +...+..|.++++++. .
T Consensus 241 ~~~~l~~~~--~~~~~s~~~q~~~~~~l~---~~~~~~~~~~~~~~~r~~~~~~L~~~g-~~~~p~~~~f~~~~~~~~~~ 314 (369)
T PRK08153 241 TIKAFDKVR--NHFGMNRIAQAAALAALK---DQAYLAEVVGKIAAARDRIAAIARANG-LTPLPSATNFVAIDCGRDGA 314 (369)
T ss_pred HHHHHHHhh--cCCCCCHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHHHHCC-CccCCCcCcEEEEECCCCcc
Confidence 998876432 357789999999998885 3333332 223333 2234556778887763 2
Q ss_pred ChHHHHHHHHHCCceee-ecCC--CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHh
Q 013008 395 SATPVVDACRDSGLLVL-TAGK--GNVVRLVPPLIISEQELDQAVEILCKTLPVLD 447 (451)
Q Consensus 395 ~~~~~~~~l~~~Gv~~~-~~~~--~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~~ 447 (451)
.+..+.++|.++||.+. |+.. .+.+|++.. ++++++.++++|++++..++
T Consensus 315 ~a~~l~~~l~~~Gi~v~~p~~~~~~~~iRis~~---~~~~~~~~~~al~~~~~~~~ 367 (369)
T PRK08153 315 FARAVLDGLIARDIFVRMPGVAPLDRCIRVSCG---PDEELDLFAEALPEALEAAR 367 (369)
T ss_pred cHHHHHHHHHHCCeEEeeCCCCCCCCeEEEecC---CHHHHHHHHHHHHHHHHHhh
Confidence 46788999999999995 4321 257888644 79999999999999987654
No 124
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.93 E-value=6.7e-24 Score=213.93 Aligned_cols=331 Identities=14% Similarity=0.141 Sum_probs=213.3
Q ss_pred ecCCCEEEeeccCcccccCC--CCCHHHHHHHHHHHhhcc---cccCCCCCHHHHHHHHHHhhccC----CCeEEecCCH
Q 013008 94 DAEGREYLDLSSGIAVNALG--HGDADWIKAVVDQANVLT---HVSNMYYSIPQIELAKRLVACSF----ADRVFFSNTG 164 (451)
Q Consensus 94 d~~G~~~iD~~~~~~~~~lG--~~~p~v~~a~~~~~~~~~---~~~~~~~~~~~~~l~~~l~~~~~----~e~v~~~~sG 164 (451)
..+|+..|+|..|.+.. +| -.+|.+.+++.+.+++.. +.+..+....+..+++++.+.++ .++|++|+|+
T Consensus 28 ~~~~~~~i~l~~G~p~~-~~~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~I~it~G~ 106 (409)
T PLN00143 28 EDDHRLAISFGFGDPSC-FECFRTTNIAEDAIVEAVRSAKFNSYAPTGGILPARRAIADYLSNDLPYQLSPDDVYLTLGC 106 (409)
T ss_pred cCCCCceeeCCCCCCCC-CCCCCCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCHhhEEEecCh
Confidence 34678899999887641 12 267888899998887531 11122233346666666655433 6799999999
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCC--CCeeEeeCCCHHHHHHhc
Q 013008 165 TEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVM--PGVNFVEYGNIEATRKLI 242 (451)
Q Consensus 165 ~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~le~~l 242 (451)
++|+..+++++. ++++.|++.+|+|+++.......+.... . .+.. .+.. -|+++|++++
T Consensus 107 ~~al~~~~~~l~-----------~~gd~v~v~~P~y~~~~~~~~~~g~~~~-~---~~~~~~~~~~----~d~~~l~~~~ 167 (409)
T PLN00143 107 KHAAEIIIKVLA-----------RPEANILLPRPGFPDVETYAIFHHLEIR-H---FDLLPEKGWE----VDLDAVEAIA 167 (409)
T ss_pred HHHHHHHHHHHc-----------CCCCEEEEcCCCCcCHHHHHHHcCCEEE-E---EeccCCCCCc----CCHHHHHHhc
Confidence 999999999665 2689999999999887644433221111 0 1111 1111 2789999988
Q ss_pred CCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccc-cccccC---CCcceeeeccccc
Q 013008 243 QPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLW-AHEHYG---IFPDIMTLAKPLA 318 (451)
Q Consensus 243 ~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~-~~~~~~---~~pdi~t~sK~lg 318 (451)
+.+..++++++|.| ++| .+++.+.+++|.++|++|+++||+||+|.+|...+..+ ....+. ...-+.+|||.++
T Consensus 168 ~~~~~~~~~~nP~N-PTG-~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~ 245 (409)
T PLN00143 168 DENTIAMVIINPGN-PCG-SVYSYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVPMGLFASIVPVITLGSISKRWM 245 (409)
T ss_pred ccCCEEEEEECCCC-CCC-CccCHHHHHHHHHHHHHcCCeEEEEccccccccCCCCCcchhhhcccCcEEEEccchhhcC
Confidence 76567778888854 444 46799999999999999999999999999875444321 111121 1222347999976
Q ss_pred -CCcccccccc--cHHHH------hhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH--------------HHhCC
Q 013008 319 -GGLPIGAALV--TEKVA------SAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS--------------KLARN 375 (451)
Q Consensus 319 -~G~~iG~v~~--~~~i~------~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~--------------~~~~~ 375 (451)
+|+|+||+++ ++.+. +.+........+ .+.++++++.++|+.. ..+++++ .++.+
T Consensus 246 ~pGlRvG~~v~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~q~a~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~L~~~ 323 (409)
T PLN00143 246 IPGWGLGWLVTCDPSGLLQICEIADSIKKALNPAPF-PPTFIQAAIPEILEKT-TEDFFSKTINILRAALAFCYDKLKEI 323 (409)
T ss_pred CCccceEEEEeeCchhhhhhHHHHHHHHHHHhccCC-CCchHHHHHHHHHhcC-hHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 6999999998 33332 222211112223 4678888888777521 1223222 22334
Q ss_pred CCcce--ecccceeEEEEecC-------ChHHHHHHH-HHCCceeeecCC---CCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 013008 376 PHVKD--VRGLGLIIGIEFDV-------SATPVVDAC-RDSGLLVLTAGK---GNVVRLVPPLIISEQELDQAVEILCKT 442 (451)
Q Consensus 376 ~~~~~--v~g~G~~~~~~~~~-------~~~~~~~~l-~~~Gv~~~~~~~---~~~iri~~~~~~t~e~i~~~l~~l~~~ 442 (451)
+.... .+..|+++|+.+.. ...+++..+ .++||.+.|+.. .+++|+++. .+++++++++++|.++
T Consensus 324 ~~~~~~~~p~gg~f~w~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRi~~~--~~~~~l~~al~rl~~~ 401 (409)
T PLN00143 324 PCIMCPQKAEGAFFALVKLNLLLLEDIEDDMEFCLKLAKEESLIILPGVTVGLKNWLRITFA--VEQSSLEDGLGRLKSF 401 (409)
T ss_pred CCCCCCCCCCeeEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEEc--CCHHHHHHHHHHHHHH
Confidence 32211 22347888888741 355666555 678999998742 467888654 5799999999999999
Q ss_pred HHHHhhcC
Q 013008 443 LPVLDSNS 450 (451)
Q Consensus 443 l~~~~~~~ 450 (451)
+++....|
T Consensus 402 l~~~~~~~ 409 (409)
T PLN00143 402 CGRHAKKP 409 (409)
T ss_pred HHHhccCC
Confidence 98765443
No 125
>PRK09148 aminotransferase; Validated
Probab=99.93 E-value=7.7e-24 Score=213.32 Aligned_cols=322 Identities=14% Similarity=0.109 Sum_probs=207.7
Q ss_pred CCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcc-ccc--CCCCCHHHHHHHHHHhhccC----CC-eEEecCCHHHH
Q 013008 96 EGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLT-HVS--NMYYSIPQIELAKRLVACSF----AD-RVFFSNTGTEA 167 (451)
Q Consensus 96 ~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~-~~~--~~~~~~~~~~l~~~l~~~~~----~e-~v~~~~sG~eA 167 (451)
.|+.+|||..|.. .++ .++.+.+++.+.++... ..+ ..+..+.+..+++.+.+.++ .+ +|++|+|+++|
T Consensus 28 ~~~~~i~l~~~~p--~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~a 104 (405)
T PRK09148 28 AGADIIDLGMGNP--DLP-TPQHIVDKLCETAQDPRTHRYSASKGIPGLRRAQAAYYARRFGVKLNPDTQVVATLGSKEG 104 (405)
T ss_pred cCCCeEEcCCCCC--CCC-CCHHHHHHHHHHHcCcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHH
Confidence 4677899987754 344 36788888887764311 111 11222346666666655434 45 79999999999
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcC---C
Q 013008 168 NEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQ---P 244 (451)
Q Consensus 168 ~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~---~ 244 (451)
+..++++.. +++|.|++.+|+|.++.......+. .... .+...+.. +++.++++++ +
T Consensus 105 l~~~~~~l~-----------~~gd~Vl~~~P~y~~~~~~~~~~g~-~v~~---v~~~~~~~-----~~~~l~~~~~~~~~ 164 (405)
T PRK09148 105 FANMAQAIT-----------APGDVILCPNPSYPIHAFGFIMAGG-VIRS---VPAEPDEE-----FFPALERAVRHSIP 164 (405)
T ss_pred HHHHHHHhc-----------CCCCEEEEcCCCCcccHHHHHhcCC-EEEE---EeCCCCCC-----CccCHHHHHhhccc
Confidence 999988665 2689999999999987644433221 1100 11111111 2233444443 3
Q ss_pred CCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccc-ccccc----CCCcceeeeccccc-
Q 013008 245 GKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLW-AHEHY----GIFPDIMTLAKPLA- 318 (451)
Q Consensus 245 ~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~-~~~~~----~~~pdi~t~sK~lg- 318 (451)
+...++++.|.| ++| ..++.+.+++|.++|++||+++|+||+|..|...+... ..... +....+.+|||.++
T Consensus 165 ~~~~v~l~~P~N-PtG-~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~~~~~~~~~i~~~SfSK~~~~ 242 (405)
T PRK09148 165 KPIALIVNYPSN-PTA-YVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQVPGAKDVTVEFTSMSKTFSM 242 (405)
T ss_pred cceEEEEeCCCC-CCC-cCCCHHHHHHHHHHHHHcCeEEEEeccchhhhcCCCCCCChhhCCCccCcEEEEeccccccCC
Confidence 233444444544 445 46799999999999999999999999998764333211 11111 12223458999998
Q ss_pred CCcccccccccHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH--------------HHhCCCCccee-cc
Q 013008 319 GGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS--------------KLARNPHVKDV-RG 383 (451)
Q Consensus 319 ~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~--------------~~~~~~~~~~v-~g 383 (451)
.|+|+||+++++++++.+.......+++.+++++.++.++|+. .+.+.++ .++++. +... ..
T Consensus 243 pGlR~G~~v~~~~~i~~l~~~~~~~~~~~~~~~q~~~~~~L~~--~~~~~~~~~~~~~~~r~~l~~~L~~~~-~~~~~p~ 319 (405)
T PRK09148 243 AGWRMGFAVGNERLIAALTRVKSYLDYGAFTPIQVAATAALNG--PQDCIAEMRELYKKRRDVLVESFGRAG-WDIPPPA 319 (405)
T ss_pred cchheeeeeCCHHHHHHHHHHHHHhccCCChHHHHHHHHHHhC--cHHHHHHHHHHHHHHHHHHHHHHHHcC-CccCCCC
Confidence 7999999999999998886443334566778888888888862 2233322 222332 2222 34
Q ss_pred cceeEEEEecC-----ChHHHHHHHH-HCCceeeecCC-----CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHh
Q 013008 384 LGLIIGIEFDV-----SATPVVDACR-DSGLLVLTAGK-----GNVVRLVPPLIISEQELDQAVEILCKTLPVLD 447 (451)
Q Consensus 384 ~G~~~~~~~~~-----~~~~~~~~l~-~~Gv~~~~~~~-----~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~~ 447 (451)
.|+++|+.+.. ...++++.|+ ++||.+.|+.. .+++||+.. .+.+++++++++|.+++++..
T Consensus 320 ~g~f~~~~l~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ri~~~--~~~~~l~~al~~l~~~l~~~~ 392 (405)
T PRK09148 320 ASMFAWAPIPEAFRHLGSLEFSKLLVEKADVAVAPGVGFGEHGDGYVRIALV--ENEQRIRQAARNIKRFLSSAD 392 (405)
T ss_pred eeEEEEEECCCccCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHHH
Confidence 57788888732 2467888877 68999998631 367898654 689999999999999987654
No 126
>PLN02187 rooty/superroot1
Probab=99.93 E-value=6.5e-24 Score=216.48 Aligned_cols=328 Identities=15% Similarity=0.137 Sum_probs=208.7
Q ss_pred CCCEEEeeccCcccccCC--CCCHHHHHHHHHHHhhcccccCCCCC----HHHHHHHHHHhhcc----CCCeEEecCCHH
Q 013008 96 EGREYLDLSSGIAVNALG--HGDADWIKAVVDQANVLTHVSNMYYS----IPQIELAKRLVACS----FADRVFFSNTGT 165 (451)
Q Consensus 96 ~G~~~iD~~~~~~~~~lG--~~~p~v~~a~~~~~~~~~~~~~~~~~----~~~~~l~~~l~~~~----~~e~v~~~~sG~ 165 (451)
+++.+|++..|.... +. -.++++.+++.+.++.... ..+.+. ..+..+++++.+.+ ..++|++|+|++
T Consensus 64 ~~~~vi~l~~Gdp~~-~p~~~~~~~~~~~~~~~~~~~~~-~~Y~~~~G~~~lR~aiA~~~~~~~~~~~~~~~I~it~G~~ 141 (462)
T PLN02187 64 VNKTILPLGHGDPSV-YPCFRTCIEAEDAVVDVLRSGKG-NSYGPGAGILPARRAVADYMNRDLPHKLTPEDIFLTAGCN 141 (462)
T ss_pred CCCCeEECCCCCCCC-CCCCCCCHHHHHHHHHHHhCCCC-CCCCCCCChHHHHHHHHHHHHHhcCCCCCcccEEEeCCHH
Confidence 467899988875421 11 1457888999988765321 111122 23455555554433 278999999999
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCC
Q 013008 166 EANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPG 245 (451)
Q Consensus 166 eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~ 245 (451)
+|+..+++++. +++|.|++.+|+|.++...+...+. .... .+..+.-.+ --|+++|++++.+.
T Consensus 142 ~al~~~~~~l~-----------~pGd~Vlv~~P~y~~y~~~~~~~g~-~~~~---~~l~~~~~~--~~d~~~l~~~~~~~ 204 (462)
T PLN02187 142 QGIEIVFESLA-----------RPNANILLPRPGFPHYDARAAYSGL-EVRK---FDLLPEKEW--EIDLEGIEAIADEN 204 (462)
T ss_pred HHHHHHHHHhc-----------CCCCEEEEeCCCCccHHHHHHHcCC-EEEE---EeCccccCC--ccCHHHHHHhcCCC
Confidence 99999999665 2689999999999987544332221 1111 011110000 02789999988765
Q ss_pred CeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccc-ccccc-CC--Ccceeeeccccc-CC
Q 013008 246 KTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLW-AHEHY-GI--FPDIMTLAKPLA-GG 320 (451)
Q Consensus 246 ~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~-~~~~~-~~--~pdi~t~sK~lg-~G 320 (451)
..+++++.|.|++ | .+++.+.+++|.++|++||++||+||+|..|-+.+..+ ....+ +. ..-+.+|||.++ +|
T Consensus 205 ~~~v~i~nP~NPT-G-~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~~~~~~~~~vi~l~SfSK~f~~pG 282 (462)
T PLN02187 205 TVAMVVINPNNPC-G-NVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFASIVPVLTLAGISKGWVVPG 282 (462)
T ss_pred cEEEEEeCCCCCC-C-CccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCceeHHHhccCCcEEEEecchhhcCCcc
Confidence 6677888886544 4 46799999999999999999999999998864444321 11112 11 122347899977 69
Q ss_pred ccccccccc--HHH---HhhccCCCccCCC--CCcHHHHHHHHHHHHHhcChHHHHH--------------HHhCCCCcc
Q 013008 321 LPIGAALVT--EKV---ASAINYGDHGSTF--AGSPLVCNAAIAVLDKISNPAFLAS--------------KLARNPHVK 379 (451)
Q Consensus 321 ~~iG~v~~~--~~i---~~~~~~~~~~~t~--~~~~~~~aaa~aal~~~~~~~~~~~--------------~~~~~~~~~ 379 (451)
+|+||++++ +.+ ++.+........+ +.+.+.++++.++|+. ..++++++ .++.++...
T Consensus 283 lRiG~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~~~~L~~-~~~~~l~~~~~~l~~~r~~l~~~L~~~~~~~ 361 (462)
T PLN02187 283 WKIGWIALNDPEGVFETTKVLQSIKQNLDVTPDPATIIQAALPAILEK-ADKNFFAKKNKILKHNVDLVCDRLKDIPCVV 361 (462)
T ss_pred ceeEEEEecCchhHHHHHHHHHHHHHhccccCCCCHHHHHHHHHHHhc-CcHHHHHHHHHHHHHHHHHHHHHHhhCCCCc
Confidence 999999973 322 2333222112222 4478899999888863 12333332 334455332
Q ss_pred e--ecccceeEEEEecC-------ChHHHHHHH-HHCCceeeecC---CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 013008 380 D--VRGLGLIIGIEFDV-------SATPVVDAC-RDSGLLVLTAG---KGNVVRLVPPLIISEQELDQAVEILCKTLPVL 446 (451)
Q Consensus 380 ~--v~g~G~~~~~~~~~-------~~~~~~~~l-~~~Gv~~~~~~---~~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~ 446 (451)
. .+..|+++++.++. +..+++..+ .++||.+.|+. ..+++||++ ..+++.+++++++|.+++++.
T Consensus 362 ~~~~P~gg~fl~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~iRis~--~~~~e~l~~al~rL~~~l~~~ 439 (462)
T PLN02187 362 CPKKPESCTYLLTKLELSLMDNIKDDIDFCVKLAREENLVFLPGDALGLKNWMRITI--GVEAHMLEDALERLKGFCTRH 439 (462)
T ss_pred CCCCCCEeEEEEeecChhhCCCCCCHHHHHHHHHhhCCEEEECccccCCCCeEEEEe--CCCHHHHHHHHHHHHHHHHHh
Confidence 1 23346888886631 344565554 68899999874 246788854 557999999999999999765
Q ss_pred h
Q 013008 447 D 447 (451)
Q Consensus 447 ~ 447 (451)
.
T Consensus 440 ~ 440 (462)
T PLN02187 440 A 440 (462)
T ss_pred h
Confidence 4
No 127
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=99.93 E-value=7.2e-24 Score=215.50 Aligned_cols=326 Identities=18% Similarity=0.156 Sum_probs=233.9
Q ss_pred CCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccc------cCCCCCHHHHHHHHHHhhccC----CCeEEecCCHH
Q 013008 96 EGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHV------SNMYYSIPQIELAKRLVACSF----ADRVFFSNTGT 165 (451)
Q Consensus 96 ~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~------~~~~~~~~~~~l~~~l~~~~~----~e~v~~~~sG~ 165 (451)
+....+||..++....+ .....+.+++.+.++..... ...+..+.+..+++++....+ .++|++|+|..
T Consensus 87 ~~~~~i~f~~g~p~~~~-fp~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~~IiiT~G~q 165 (459)
T COG1167 87 DDPSVIDFAGGLPDPSL-FPLEALRRALARVLRNYGASLALQYGPTAGLPELREAIAAYLLARRGISCEPEQIVITSGAQ 165 (459)
T ss_pred CCCceecCCCCCCCccc-CCHHHHHHHHHHHHhhcchhhhhcCCCCCCcHHHHHHHHHHHHHhcCCccCcCeEEEeCCHH
Confidence 44788999888753322 24456666666665432211 112223336666666663333 67999999999
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCC----CHHHHHHh
Q 013008 166 EANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYG----NIEATRKL 241 (451)
Q Consensus 166 eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----d~~~le~~ 241 (451)
+|+..++++.. +++|.|++-+|+|++........+ ..+..+|.+ |+++|++.
T Consensus 166 ~al~l~~~~l~-----------~pGd~v~vE~PtY~~~~~~~~~~g-------------~~~~~vp~d~~G~~~e~le~~ 221 (459)
T COG1167 166 QALDLLLRLLL-----------DPGDTVLVEDPTYPGALQALEALG-------------ARVIPVPVDEDGIDPEALEEA 221 (459)
T ss_pred HHHHHHHHHhC-----------CCCCEEEEcCCCcHHHHHHHHHcC-------------CcEEecCCCCCCCCHHHHHHH
Confidence 99999998766 279999999999998764443322 112222222 79999999
Q ss_pred cCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccc-c---ccccccCCCcceeeecccc
Q 013008 242 IQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGY-L---WAHEHYGIFPDIMTLAKPL 317 (451)
Q Consensus 242 l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~-~---~~~~~~~~~pdi~t~sK~l 317 (451)
++..+++++++.|.+.|+.+..++.+-.++|.++|++||+++|.||+|..|-+.+. . .+.+..+.+..+.+|||.+
T Consensus 222 ~~~~~~k~~y~~P~~qNPtG~tms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~~l~~ld~~~rViy~gSFSK~l 301 (459)
T COG1167 222 LAQWKPKAVYVTPTFQNPTGVTMSLERRKALLALAEKYDVLIIEDDYYGELRYDGPPPPPLKALDAPGRVIYLGSFSKTL 301 (459)
T ss_pred HhhcCCcEEEECCCCCCCCCCccCHHHHHHHHHHHHHcCCeEEeeCcchhhhcCCCCCCChHhhCCCCCEEEEeeehhhc
Confidence 98778999999997666655678999999999999999999999999988855543 2 2333445566788999999
Q ss_pred cCCcccccccccHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH---------------HHhCCC-Cccee
Q 013008 318 AGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS---------------KLARNP-HVKDV 381 (451)
Q Consensus 318 g~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~---------------~~~~~~-~~~~v 381 (451)
+.|+|+||+++++++++.+....+..+.+.+.+.|.+...-+..-.-+.++++ +.+..+ .+...
T Consensus 302 ~PglRlG~vv~p~~~~~~~~~~k~~~~~~~s~~~Q~~la~~l~~G~~~~hl~~lR~~y~~rr~~l~~~L~~~~~~~~~~~ 381 (459)
T COG1167 302 APGLRLGYVVAPPELIEKLLRLKQAADLGPSSLSQAALAAFLLSGHYDRHLRRLRREYARRRDALLEALAEYLPELATWT 381 (459)
T ss_pred ccccceeeeeCCHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeee
Confidence 99999999999999999987666777888888988777766651111222222 223334 23222
Q ss_pred -cccceeEEEEec--CChHHHHHHHHHCCceeeecCC--------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHh
Q 013008 382 -RGLGLIIGIEFD--VSATPVVDACRDSGLLVLTAGK--------GNVVRLVPPLIISEQELDQAVEILCKTLPVLD 447 (451)
Q Consensus 382 -~g~G~~~~~~~~--~~~~~~~~~l~~~Gv~~~~~~~--------~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~~ 447 (451)
+..|+++|+.+. .+..++.+.++++|+.+.|.+. .+.+|++++.. ++|++++++++|.+++.+..
T Consensus 382 ~p~gG~flwl~l~~~~~~~~l~~~a~~~gv~i~~~g~~f~~~~~~~~~~Rl~~s~~-~~e~i~~gi~~l~~~~~~~~ 457 (459)
T COG1167 382 RPEGGLFLWLELPEGIDARELLAAALEKGVVVTPLGSAFSADGDPRNGLRLSFSSP-SEEEIEEGIKRLAALLREAA 457 (459)
T ss_pred cCCceEEEEEEcCCCCCHHHHHHHHHHCCCEEEcCCccccCCCCCCCeEEEEcCCC-CHHHHHHHHHHHHHHHHHHh
Confidence 334899999995 3678899999999999988321 24799987755 68999999999999998754
No 128
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.93 E-value=9.4e-24 Score=213.81 Aligned_cols=329 Identities=14% Similarity=0.122 Sum_probs=210.8
Q ss_pred CCEEEeeccCcccccCCC-CCHHHHHHHHHHHhhccc-ccC--CCCCHHHHHHHHHHhhccC----CCeEEecCCHHHHH
Q 013008 97 GREYLDLSSGIAVNALGH-GDADWIKAVVDQANVLTH-VSN--MYYSIPQIELAKRLVACSF----ADRVFFSNTGTEAN 168 (451)
Q Consensus 97 G~~~iD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~-~~~--~~~~~~~~~l~~~l~~~~~----~e~v~~~~sG~eA~ 168 (451)
|+.+|++..|.....-.. .+|++.+++.++++.... .+. .+..+.+..+++++...++ .++|++|+|+++|+
T Consensus 51 ~~~~i~l~~G~P~~~~~~~~~~~~~~a~~~al~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~v~it~G~~~al 130 (430)
T PLN00145 51 PRPVLPLGHGDPSAFPCFRTAPEAEDAVAAALRSGKYNSYSTCVGLLPARRAIAEYLSRDLPYELSTDDIYLTAGCAQAI 130 (430)
T ss_pred CCCeeeCCCCCCCCCCCCCCCHHHHHHHHHHHHcCcCCCCCCCccCHHHHHHHHHHHhhccCCCCChhhEEEeCCHHHHH
Confidence 788999988865331112 468899999988875321 111 1222335556666654433 57899999999999
Q ss_pred HHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeE
Q 013008 169 EAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTA 248 (451)
Q Consensus 169 ~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a 248 (451)
..+++.+. +++|.|++.+|+|+.+.......+..... .+..+...+. -|+++|++++.++..+
T Consensus 131 ~l~~~~l~-----------~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~----~~~~~~~~~~--~d~~~l~~~~~~~~~~ 193 (430)
T PLN00145 131 EIIMSVLA-----------QPGANILLPRPGYPLYEARAVFSGLEVRH----FDLLPERGWE--VDLEGVEALADENTVA 193 (430)
T ss_pred HHHHHHhc-----------CCCCEEEEcCCCCccHHHHHHHcCCEEEE----eeCCcccCCc--CCHHHHHHHhCcCceE
Confidence 99999664 26899999999998875443332221111 0111110000 2889999988766677
Q ss_pred EEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccc-cccccC---CCcceeeeccccc-CCccc
Q 013008 249 AVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLW-AHEHYG---IFPDIMTLAKPLA-GGLPI 323 (451)
Q Consensus 249 avi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~-~~~~~~---~~pdi~t~sK~lg-~G~~i 323 (451)
++++.|.| ++| .+.+.+.+++|.++|++||+++|+||+|..|.+.+..+ ....++ ...-+.+|||.++ .|||+
T Consensus 194 i~i~~P~N-PtG-~v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pG~Rl 271 (430)
T PLN00145 194 MVIINPNN-PCG-SVYSYEHLAKIAETARKLGILVIADEVYDHLTFGSKPFVPMGVFGEVAPVLTLGSISKRWVVPGWRL 271 (430)
T ss_pred EEEeCCCC-CCC-CCCCHHHHHHHHHHHHHcCCEEEEeccchhhccCCCCccchhhhcccCcEEEEeccccccCCCCeeE
Confidence 77777754 444 46799999999999999999999999998874433211 111111 1222347899976 69999
Q ss_pred ccccc--cHHHHh------hccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH--------------HHhCCCCcce-
Q 013008 324 GAALV--TEKVAS------AINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS--------------KLARNPHVKD- 380 (451)
Q Consensus 324 G~v~~--~~~i~~------~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~--------------~~~~~~~~~~- 380 (451)
||+++ ++.+++ .+... ...+.+.+.+.|+|+..+|+.- .+++.++ .++.++.+..
T Consensus 272 G~iv~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Q~a~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~ 349 (430)
T PLN00145 272 GWIATCDPNGILKETKVVDSIRNY-LNISTDPATFVQGAIPQIIANT-KEEFFTKTLGLLKETADICYEKIKEIKCITCP 349 (430)
T ss_pred EEEEEecchhhhhhhHHHHHHHHH-hcccCCCCHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 99986 444433 22211 1122345678888888887631 1233322 2344554432
Q ss_pred -ecccceeEEEEecC-------ChHHHHHHHH-HCCceeeecC---CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHhh
Q 013008 381 -VRGLGLIIGIEFDV-------SATPVVDACR-DSGLLVLTAG---KGNVVRLVPPLIISEQELDQAVEILCKTLPVLDS 448 (451)
Q Consensus 381 -v~g~G~~~~~~~~~-------~~~~~~~~l~-~~Gv~~~~~~---~~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~~~ 448 (451)
.+..|+++++.++. +..+++..|+ ++||++.|+. ..+++||+.. .+.+++++++++|.+++.+.+.
T Consensus 350 ~~P~ga~y~~v~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~lRis~~--~~~~~l~~al~rl~~~~~~~~~ 427 (430)
T PLN00145 350 HKPEGSMFVMVKLDLSCLSGIKDDMDFCCKLAKEESVVVLPGSALGMKNWLRITFA--IDPPSLEDGLERLKSFCLRHAK 427 (430)
T ss_pred cCCCeeeEEEeccChhhcCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEeC--CCHHHHHHHHHHHHHHHHHhcc
Confidence 24456677776631 3456776666 5699999863 2478999655 5899999999999999987654
No 129
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.93 E-value=4.6e-24 Score=214.75 Aligned_cols=326 Identities=16% Similarity=0.114 Sum_probs=209.8
Q ss_pred CCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcc-cccC-CCCCHHHHHHHHHHhhccC-----CC-eEEecCCHHHH
Q 013008 96 EGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLT-HVSN-MYYSIPQIELAKRLVACSF-----AD-RVFFSNTGTEA 167 (451)
Q Consensus 96 ~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~-~~~~-~~~~~~~~~l~~~l~~~~~-----~e-~v~~~~sG~eA 167 (451)
.|++++|+.+|.. .++ .+|.+.+++.+.+.... ..+. .+....+..+++++.+.++ .+ +|++|+|+++|
T Consensus 42 ~~~~~i~L~~g~p--~~~-~~~~~~~~l~~~~~~~~~~~Y~~~G~~~lr~aia~~~~~~~g~~~~~~~~~I~it~Gs~~a 118 (410)
T PRK06290 42 PDMELIDMGVGEP--DEM-ADESVVEVLCEEAKKPENRGYADNGIQEFKEAAARYMEKVFGVKDIDPVTEVIHSIGSKPA 118 (410)
T ss_pred CCCCeEEcCCCCC--CCC-CCHHHHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHHHHHHcCCCcCCCcceEEEccCHHHH
Confidence 4677899998875 454 56778888887664321 1111 1222335666666655433 34 79999999999
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCe
Q 013008 168 NEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKT 247 (451)
Q Consensus 168 ~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~ 247 (451)
+..++++.. ++++.|++.+|+|.++...+...+. .... .+...+..+. .|++++++.+.+ ++
T Consensus 119 l~~~~~~~~-----------~~gd~Vlv~~P~y~~~~~~~~~~g~-~v~~---v~~~~~~~~~--~d~~~l~~~~~~-~~ 180 (410)
T PRK06290 119 LAMLPSCFI-----------NPGDVTLMTVPGYPVTGTHTKYYGG-EVYN---LPLLEENNFL--PDLDSIPKDIKE-KA 180 (410)
T ss_pred HHHHHHHhC-----------CCCCEEEEeCCCCccHHHHHHHcCC-EEEE---EecCCCcCCc--CCHHHHHHhhcc-cc
Confidence 999888654 2689999999999887554433222 1111 1111111111 278899888864 45
Q ss_pred EEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccc-cc---cCCCcceeeeccccc-CCcc
Q 013008 248 AAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAH-EH---YGIFPDIMTLAKPLA-GGLP 322 (451)
Q Consensus 248 aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~-~~---~~~~pdi~t~sK~lg-~G~~ 322 (451)
++|++...++++| .+++.+.+++|.++|++||++||+||+|..+...+....+ .. .+...-+.+|||.++ .|+|
T Consensus 181 k~i~l~nP~NPTG-~v~s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~~~s~~~~~~~~~~~I~i~SfSK~~g~~GlR 259 (410)
T PRK06290 181 KLLYLNYPNNPTG-AVATKEFYEEVVDFAKENNIIVVQDAAYAALTFDGKPLSFLSVPGAKEVGVEIHSLSKAYNMTGWR 259 (410)
T ss_pred eEEEEECCCCCCC-cCCCHHHHHHHHHHHHHcCeEEEEecchhhceeCCCCcChhcCCCccccEEEEeechhhcCCchhh
Confidence 5666553344445 4679999999999999999999999999876433321111 11 122233458999997 6999
Q ss_pred cccccccHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH--------------HHhCCCCcceeccc-cee
Q 013008 323 IGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS--------------KLARNPHVKDVRGL-GLI 387 (451)
Q Consensus 323 iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~--------------~~~~~~~~~~v~g~-G~~ 387 (451)
+||+++++++++.+.........+.+.+++.++.++|+. .++.++ .++.++ +...++. |++
T Consensus 260 iG~ii~~~~l~~~l~~~~~~~~~~~~~~~q~aa~~~l~~---~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~p~g~f~ 335 (410)
T PRK06290 260 LAFVVGNELIVKAFATVKDNNDSGQFIAIQKAGIYALDH---PEITEKIREKYSRRLDKLVKILNEVG-FKAEMPGGTFY 335 (410)
T ss_pred eEeEEeCHHHHHHHHHHHhccccCCcHHHHHHHHHHhhC---cHHHHHHHHHHHHHHHHHHHHHHhCC-CeecCCCeeeE
Confidence 999999999998876433333444556788888777752 222222 223332 2223333 566
Q ss_pred EEEEec---------CChHHHHHHHHHCCc-eeeecCC-CCEEEEeCC-CCCCHHHHHHHHHHHHHHHHHHh
Q 013008 388 IGIEFD---------VSATPVVDACRDSGL-LVLTAGK-GNVVRLVPP-LIISEQELDQAVEILCKTLPVLD 447 (451)
Q Consensus 388 ~~~~~~---------~~~~~~~~~l~~~Gv-~~~~~~~-~~~iri~~~-~~~t~e~i~~~l~~l~~~l~~~~ 447 (451)
+|+.+. .+..++++.|+++|+ .+.|+.. ++++||+++ ...++|+.++++++|++.|.++.
T Consensus 336 l~v~lp~~~~~~~~~~~~~~~~~~Ll~~~~v~~~p~~~~~~~lRi~~~~~~~~~~~~~~~~~~l~~~~~~~~ 407 (410)
T PRK06290 336 LYVKAPKGTKSGIKFENAEEFSQYLIKEKLISTVPWDDAGHFLRFSVTFEAKDEEEEDRILEEIKRRLSDVE 407 (410)
T ss_pred EEEECCCccccCCCCCCHHHHHHHHHHhCCEEEECCccccCeEEEEEEcccccccchhHHHHHHHHHHhhcc
Confidence 677773 146789999998865 4445432 467898654 24588999999999999887653
No 130
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.93 E-value=4.9e-24 Score=211.80 Aligned_cols=308 Identities=17% Similarity=0.178 Sum_probs=205.9
Q ss_pred cCCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHhhccC--CCeEEe-cCCHHHHHHHH
Q 013008 95 AEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSF--ADRVFF-SNTGTEANEAA 171 (451)
Q Consensus 95 ~~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~e~v~~-~~sG~eA~~~a 171 (451)
.+++++|||.+|.. .+| .+|.+.+++.+.+..... ++.....++.+.++++++ .+++++ ++|.++++..+
T Consensus 31 ~~~~~~i~l~~~~~--~~~-~~~~~~~~~~~~~~~~~~----y~~~~~~~lr~~ia~~~~~~~~~i~~~~~Ga~~~i~~~ 103 (361)
T PRK00950 31 IDPESIIKLGSNEN--PLG-PSPKAVEAIEKELSKIHR----YPEPDAPELREALSKYTGVPVENIIVGGDGMDEVIDTL 103 (361)
T ss_pred CCccceEEccCCCC--CCC-CCHHHHHHHHHHHHhhcC----CCCCCHHHHHHHHHHHhCCCHHHEEEeCCCHHHHHHHH
Confidence 35679999998854 466 678899998887765321 222234778888888887 568888 67778888888
Q ss_pred HHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEE
Q 013008 172 IKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVF 251 (451)
Q Consensus 172 l~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi 251 (451)
++++. ++++.|++.+|+|..+....... |..... .+...+. ..|++++++.+.+ ++++++
T Consensus 104 ~~~~~-----------~~gd~vlv~~p~y~~~~~~~~~~-g~~~~~---~~~~~~~----~~~~~~l~~~~~~-~~~~v~ 163 (361)
T PRK00950 104 MRTFI-----------DPGDEVIIPTPTFSYYEISAKAH-GAKPVY---AKREEDF----SLDVDSVLNAITE-KTKVIF 163 (361)
T ss_pred HHHhc-----------CCCCEEEEcCCChHHHHHHHHHc-CCEEEE---eecCCCC----CcCHHHHHHHhcc-CCCEEE
Confidence 87653 15789999999997664433222 211110 0111110 1278999988864 444555
Q ss_pred EccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCccccccc-ccccCCCcceeeeccccc-CCccccccccc
Q 013008 252 VEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWA-HEHYGIFPDIMTLAKPLA-GGLPIGAALVT 329 (451)
Q Consensus 252 ~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~-~~~~~~~pdi~t~sK~lg-~G~~iG~v~~~ 329 (451)
++.+++++|.+.+ .+++.++|+++|+++|+||+|.+|. .+.... ....+....+.+|||.+| .|+|+||++++
T Consensus 164 ~~~p~nptG~~~~----~~~l~~l~~~~~~~li~De~y~~~~-~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~~~~ 238 (361)
T PRK00950 164 LCTPNNPTGNLIP----EEDIRKILESTDALVFVDEAYVEFA-EYDYTPLALEYDNLIIGRTFSKVFGLAGLRIGYGFVP 238 (361)
T ss_pred EeCCCCCCCCCcC----HHHHHHHHHHCCcEEEEECchhhhC-ccchHHHHHhcCCEEEEEeehHhhcCchhhcchhcCC
Confidence 4444566676666 6678888999999999999998773 221111 111121223458999998 69999999999
Q ss_pred HHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH-----------HHhCCCCcceecccceeEEEEec-CChH
Q 013008 330 EKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS-----------KLARNPHVKDVRGLGLIIGIEFD-VSAT 397 (451)
Q Consensus 330 ~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~-----------~~~~~~~~~~v~g~G~~~~~~~~-~~~~ 397 (451)
+++++.+... ...++.++++++++.++++ ..+++++ +.+.+. +...+..|.++++.++ .+..
T Consensus 239 ~~~~~~~~~~--~~~~~~~~~~~~~a~~~l~---~~~~~~~~~~~~~~~r~~l~~~l~-~~~~~~~~~~i~~~~~~~~~~ 312 (361)
T PRK00950 239 EWLIDYYMRA--KTPFSLTRLSQAAAIAALS---DKEYIEKSIEHGIKSREYLYNELP-FKVYPSEANFVLVDVTPMTAK 312 (361)
T ss_pred HHHHHHHHHh--cCCCCCCHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHhhcC-eeECCCcceEEEEECCCCCHH
Confidence 9998877643 2345577888888887775 3333322 223332 2223456778888773 3578
Q ss_pred HHHHHHHHCCceeeecCC-----CCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 013008 398 PVVDACRDSGLLVLTAGK-----GNVVRLVPPLIISEQELDQAVEILCKTL 443 (451)
Q Consensus 398 ~~~~~l~~~Gv~~~~~~~-----~~~iri~~~~~~t~e~i~~~l~~l~~~l 443 (451)
++++.|.++||.+.++.. .+.+|+++. +.+++++++++|++++
T Consensus 313 ~~~~~l~~~gv~v~~~~~f~~~~~~~lRis~~---~~~~~~~l~~~L~~il 360 (361)
T PRK00950 313 EFCEELLKRGVIVRDCTSFRGLGDYYIRVSIG---TFEENERFLEILKEIV 360 (361)
T ss_pred HHHHHHHHCCEEEeeCCccCCCCCCeEEEECC---CHHHHHHHHHHHHHHh
Confidence 899999999999987521 257898754 7889999999998875
No 131
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.93 E-value=8.9e-24 Score=212.79 Aligned_cols=325 Identities=17% Similarity=0.085 Sum_probs=214.2
Q ss_pred CCEEEeeccCcccccCCCCCHHHHHHHHHHHhhccccc--CCCCCHHHHHHHHHHhhccC----CCeEEecCCHHHHHHH
Q 013008 97 GREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVS--NMYYSIPQIELAKRLVACSF----ADRVFFSNTGTEANEA 170 (451)
Q Consensus 97 G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~--~~~~~~~~~~l~~~l~~~~~----~e~v~~~~sG~eA~~~ 170 (451)
|.+++|+..|... ++ .+|.+.+++.+.+++....+ ..+..+.+.++++++.+.++ .++|++|+|+++|+..
T Consensus 32 ~~~~i~l~~g~p~--~~-~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~ 108 (402)
T PRK06107 32 GRSIVDLTVGEPD--FD-TPDHIKQAAVAAIERGETKYTLVNGTPALRKAIIAKLERRNGLHYADNEITVGGGAKQAIFL 108 (402)
T ss_pred cCCEEEcCCCCCC--CC-CCHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHH
Confidence 4567888887653 33 47889999998886432211 11223446778888876654 6789999999999999
Q ss_pred HHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEE
Q 013008 171 AIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAV 250 (451)
Q Consensus 171 al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aav 250 (451)
+++... .+++.|++.+|+|.++........+... . .+...+..+ . -|++++++.+.++..+++
T Consensus 109 ~~~~~~-----------~~gd~vl~~~p~y~~y~~~~~~~~~~~~-~---v~~~~~~~~-~-~~~~~l~~~~~~~~~~v~ 171 (402)
T PRK06107 109 ALMATL-----------EAGDEVIIPAPYWVSYPDMVLANDGTPV-I---VACPEEQGF-K-LTPEALEAAITPRTRWLI 171 (402)
T ss_pred HHHHhc-----------CCCCEEEEecCCCcCHHHHHHHcCCEEE-E---ecCCcccCC-C-CCHHHHHhhcCcCceEEE
Confidence 987543 1689999999998877544332222111 1 111100000 0 267899998875444455
Q ss_pred EEccccCCCCccccCHHHHHHHHHHHHHh-CCEEEEeccccCCCcccccc-cccc--cCCCcc---eeeeccccc-CCcc
Q 013008 251 FVEPIQGEGGIYSATKEFLQFLRDACDDA-GALLVFDEVQCGLGRTGYLW-AHEH--YGIFPD---IMTLAKPLA-GGLP 322 (451)
Q Consensus 251 i~ep~~~~~G~~~~~~~~l~~l~~l~~~~-g~llI~DEv~tg~gr~G~~~-~~~~--~~~~pd---i~t~sK~lg-~G~~ 322 (451)
++.|. +++| ..++.+.+++|+++|++| ++++|+||+|..+...+..+ .... .+.... +.+|||.++ .|+|
T Consensus 172 l~~p~-NPtG-~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlR 249 (402)
T PRK06107 172 LNAPS-NPTG-AVYSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELRDRVLVTNGVSKTYAMTGWR 249 (402)
T ss_pred EECCC-CCCC-cCcCHHHHHHHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcCccCCEEEEeccchhhcCcccc
Confidence 55564 4445 467999999999999998 99999999998764444211 1111 111122 336799998 7999
Q ss_pred cccccccHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH--------------HHhCCCCcceecc-ccee
Q 013008 323 IGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS--------------KLARNPHVKDVRG-LGLI 387 (451)
Q Consensus 323 iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~--------------~~~~~~~~~~v~g-~G~~ 387 (451)
+||+++++++++.+.......+++.+.++++++..+|+. .+.++++ .+++++.+....+ .|++
T Consensus 250 iG~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~p~gg~~ 327 (402)
T PRK06107 250 IGYAAGPADLIAAINKLQSQSSSCPSSISQAAAAAALNG--DQSFVTESVAVYKQRRDYALALLNAIPGLSCLVPDGAFY 327 (402)
T ss_pred eeeeecCHHHHHHHHHHHHhcccCCChHHHHHHHHHhcC--ChHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCcceE
Confidence 999999999999886544445667888999999888852 2223222 2334443333333 4666
Q ss_pred EEEEec-------------CChHHHHHHHH-HCCceeeecCC---CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHh
Q 013008 388 IGIEFD-------------VSATPVVDACR-DSGLLVLTAGK---GNVVRLVPPLIISEQELDQAVEILCKTLPVLD 447 (451)
Q Consensus 388 ~~~~~~-------------~~~~~~~~~l~-~~Gv~~~~~~~---~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~~ 447 (451)
+|+.+. .+..+++..|+ ++||.+.|+.. .+++|++.. .++|++++++++|.+++++++
T Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~Fg~~~~iRis~~--~~~e~l~~~l~~l~~~l~~~~ 402 (402)
T PRK06107 328 LYVNCAGLIGKTTPEGKVLETDQDVVLYLLDSAGVAVVQGTAYGLSPYFRLSIA--TSLETLEEACARIERAVAALR 402 (402)
T ss_pred EeeecccccccccccccCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEeC--CCHHHHHHHHHHHHHHHHhcC
Confidence 777652 13456776665 67999998732 367888655 589999999999999987753
No 132
>PRK08068 transaminase; Reviewed
Probab=99.93 E-value=6e-24 Score=213.24 Aligned_cols=318 Identities=16% Similarity=0.111 Sum_probs=202.0
Q ss_pred CCEEEeeccCcccccCCCCCHHHHHHHHHHHhhccc-cc--CCCCCHHHHHHHHHHhhccC----CC-eEEecCCHHHHH
Q 013008 97 GREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTH-VS--NMYYSIPQIELAKRLVACSF----AD-RVFFSNTGTEAN 168 (451)
Q Consensus 97 G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~-~~--~~~~~~~~~~l~~~l~~~~~----~e-~v~~~~sG~eA~ 168 (451)
|..+|||..+.. -...+|.+.+++.+.+..... .+ ..+....+.++++++.+.++ .+ +|++|+|+++++
T Consensus 31 ~~~~i~l~~~~p---~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~~g~~~~~~~~i~it~G~~~~l 107 (389)
T PRK08068 31 GHDVINLGQGNP---DQPTPEHIVEALQEAAENPANHKYSPFRGYPFLKEAAADFYKREYGVTLDPETEVAILFGGKAGL 107 (389)
T ss_pred CCCeEEecCCCC---CCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHH
Confidence 456789888754 234678899999988764211 11 12223335566666554434 45 799999999999
Q ss_pred HHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeE
Q 013008 169 EAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTA 248 (451)
Q Consensus 169 ~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a 248 (451)
..++++.. .+++.|++.+|+|..+...+...+. .... .+..++..+. .|++++++.+......
T Consensus 108 ~~~~~~~~-----------~~gd~vlv~~P~y~~~~~~~~~~g~-~~~~---i~~~~~~~~~--~d~~~l~~~~~~~~~~ 170 (389)
T PRK08068 108 VELPQCLM-----------NPGDTILVPDPGYPDYLSGVALARA-QFET---MPLIAENNFL--PDYTKIPEEVAEKAKL 170 (389)
T ss_pred HHHHHHhC-----------CCCCEEEEcCCCCcchHHHHHhcCC-EEEE---eecccccCCC--CCHHHHHHhccccceE
Confidence 98877554 1688999999999877654433222 1111 1211111010 2788998888643334
Q ss_pred EEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccc-ccc-ccccC---CCcceeeeccccc-CCcc
Q 013008 249 AVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGY-LWA-HEHYG---IFPDIMTLAKPLA-GGLP 322 (451)
Q Consensus 249 avi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~-~~~-~~~~~---~~pdi~t~sK~lg-~G~~ 322 (451)
+++++|. +++| ..++.+.+++|.++|++||+++|+||+|..|...+. ... ....+ ....+.+|||.+| .|+|
T Consensus 171 v~l~~P~-NPTG-~~~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~g~~GlR 248 (389)
T PRK08068 171 MYLNYPN-NPTG-AVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGAKDVGIELYTLSKTFNMAGWR 248 (389)
T ss_pred EEEECCC-CCCC-CcCCHHHHHHHHHHHHHcCeEEEEehhhhhhccCCCCCcChhhCCCccCCEEEEecchhccCCccce
Confidence 4444464 4445 467999999999999999999999999987755442 111 11122 2233458999997 7999
Q ss_pred cccccccHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH--------------HHhCCCCcceecccc-ee
Q 013008 323 IGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS--------------KLARNPHVKDVRGLG-LI 387 (451)
Q Consensus 323 iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~--------------~~~~~~~~~~v~g~G-~~ 387 (451)
+||+++++++++.+.........+.+++.+.++.+++. ....++++ .++.+. +...++.| ++
T Consensus 249 iG~~~~~~~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~--~~~~~~~~~~~~~~~~r~~~~~~L~~~g-~~~~~~~g~~~ 325 (389)
T PRK08068 249 VAFAVGNESVIEAINLLQDHLFVSLFGAIQDAAIEALL--SDQSCVAELVARYESRRNAFISACREIG-WEVDAPKGSFF 325 (389)
T ss_pred eEeEecCHHHHHHHHHHHhhccCCCChHHHHHHHHHHh--CcHHHHHHHHHHHHHHHHHHHHHHHHCC-CcccCCCeeEE
Confidence 99999999999887643322334445556666666664 22232222 223332 22234444 56
Q ss_pred EEEEec--CChHHHHHHHHH-CCceeeecC---C--CCEEEEeCCCCCCHHHHHHHHHHHHH
Q 013008 388 IGIEFD--VSATPVVDACRD-SGLLVLTAG---K--GNVVRLVPPLIISEQELDQAVEILCK 441 (451)
Q Consensus 388 ~~~~~~--~~~~~~~~~l~~-~Gv~~~~~~---~--~~~iri~~~~~~t~e~i~~~l~~l~~ 441 (451)
+|+.+. .+..++++.|++ +||.+.|+. . .+++||+.. .+++.+.+++++|.+
T Consensus 326 ~~v~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~--~~~~~l~~al~~l~~ 385 (389)
T PRK08068 326 AWMPVPKGYTSEQFADLLLEKAHVAVAPGNGFGEHGEGYVRVGLL--TDEERLREAVERIGK 385 (389)
T ss_pred EEEECCCCCCHHHHHHHHHHhCCEEEecchHhCccCCCeEEEEEc--CCHHHHHHHHHHHHH
Confidence 788874 357789999986 699998852 1 257888664 577888888888875
No 133
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=99.93 E-value=5.4e-24 Score=211.11 Aligned_cols=311 Identities=21% Similarity=0.257 Sum_probs=208.2
Q ss_pred CCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHhhccC--CCeEEecCCHHHHHHHHHH
Q 013008 96 EGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSF--ADRVFFSNTGTEANEAAIK 173 (451)
Q Consensus 96 ~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~e~v~~~~sG~eA~~~al~ 173 (451)
+|.+++||..|.. .++ .+|.+.+++.+.++.... |+.....+|.+.++++++ .++|++|+|+++|+..+++
T Consensus 28 ~~~~~i~l~~~~~--~~~-~~~~~~~~~~~~~~~~~~----Y~~~~~~~lr~~ia~~~~~~~~~I~it~G~~~al~~~~~ 100 (357)
T PRK14809 28 DPDDLVKLSSNEN--PHG-PSPAAVEAIREAAERVHS----YPKASHADLTAALADRWDVSPEQVWLANGGDGALDYLAR 100 (357)
T ss_pred CccceeEecCCCC--CCC-CCHHHHHHHHHHHhhhhc----CCCCCHHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHH
Confidence 4567999988755 454 578889999887764221 222235577788888776 7899999999999999988
Q ss_pred HHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEc
Q 013008 174 FARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVE 253 (451)
Q Consensus 174 ~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~e 253 (451)
++. ++++.|++.+|+|..+.......+. .... .++.....+ . .|.+++++... ++++|++.
T Consensus 101 ~~~-----------~~gd~V~v~~P~y~~~~~~~~~~g~-~~~~---~~l~~~~~~-~-~~~~~~~~~~~--~~k~i~l~ 161 (357)
T PRK14809 101 AML-----------DPGDTVLVPDPGFAYYGMSARYHHG-EVRE---YPVSKADDF-E-QTADTVLDAYD--GERIVYLT 161 (357)
T ss_pred Hhc-----------CCCCEEEEeCCChHHHHHHHHHcCC-eEEE---EecccCcCC-C-cCHHHHHHhhc--CCcEEEEe
Confidence 654 2689999999998755433222211 1100 011110000 0 25677766553 23444444
Q ss_pred cccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccc-cccccCCCcceeeeccccc-CCcccccccccHH
Q 013008 254 PIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLW-AHEHYGIFPDIMTLAKPLA-GGLPIGAALVTEK 331 (451)
Q Consensus 254 p~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~-~~~~~~~~pdi~t~sK~lg-~G~~iG~v~~~~~ 331 (451)
+.++++|. +++.+.+++|+++|++ +++||+||+|..|...+... ..+..+....+.+|||.++ .|+|+||++++++
T Consensus 162 ~p~NPTG~-~~s~~~~~~l~~~~~~-~~~iI~De~y~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~~ 239 (357)
T PRK14809 162 SPHNPTGS-EIPLDEVEALAERTDE-ETLVVVDEAYGEFAERPSAVALVEERDDVAVLRTFSKAYGLAGLRLGYAVVPEE 239 (357)
T ss_pred CCCCCCCc-CCCHHHHHHHHHhCcc-CcEEEEechhhhccCCchhHHHHhhCCCEEEEecchhHhcCcchhheeeecCHH
Confidence 44555554 5688889999999875 78999999998885433211 1122222344558999998 7999999999999
Q ss_pred HHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH-----------HHhCCCCcceecccceeEEEEecCChHHHH
Q 013008 332 VASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS-----------KLARNPHVKDVRGLGLIIGIEFDVSATPVV 400 (451)
Q Consensus 332 i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~-----------~~~~~~~~~~v~g~G~~~~~~~~~~~~~~~ 400 (451)
+++.+... ..+++.+++++.++.++|+ +++++++ +.+.+... ..+..|+++|+.+. +..+++
T Consensus 240 ~~~~~~~~--~~~~~~~~~~~~~a~~~l~---~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~~~g~f~~~~~~-~~~~~~ 312 (357)
T PRK14809 240 WADAYARV--NTPFAASELACRAGLAALD---DDEHVERTVETARWAREYIREELDAP-TWESAGNFVLAEVG-DASAVA 312 (357)
T ss_pred HHHHHHHh--CCCCCCCHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHhcCc-cCCCCCCEEEEECC-CHHHHH
Confidence 99888643 2467778888888888774 3444433 11222111 23567889998874 467899
Q ss_pred HHHHHCCceeeecCC---CCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q 013008 401 DACRDSGLLVLTAGK---GNVVRLVPPLIISEQELDQAVEILCKTLP 444 (451)
Q Consensus 401 ~~l~~~Gv~~~~~~~---~~~iri~~~~~~t~e~i~~~l~~l~~~l~ 444 (451)
+.|.++||.+.++.. ++++|+++. +++++++++++|.++++
T Consensus 313 ~~l~~~gv~v~~g~~f~~~~~iRls~~---~~~~~~~~l~~L~~~l~ 356 (357)
T PRK14809 313 EAAQERGVIVRDCTSFGLPECIRITCG---TREETERAVEVLNEVLA 356 (357)
T ss_pred HHHHHCCEEEEECccCCCCCeEEEecC---CHHHHHHHHHHHHHHhc
Confidence 999999999998742 367898643 57899999999998764
No 134
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.93 E-value=9.8e-24 Score=211.24 Aligned_cols=318 Identities=16% Similarity=0.146 Sum_probs=206.3
Q ss_pred EEEeeccCcccccCCCCCHHHHHHHHHHHhhccc-cc-CCCCCHHHHHHHHHHhhccC----CCeEEecCCHHHHHHHHH
Q 013008 99 EYLDLSSGIAVNALGHGDADWIKAVVDQANVLTH-VS-NMYYSIPQIELAKRLVACSF----ADRVFFSNTGTEANEAAI 172 (451)
Q Consensus 99 ~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~-~~-~~~~~~~~~~l~~~l~~~~~----~e~v~~~~sG~eA~~~al 172 (451)
.++||..|.. .++ .+|++.+++.+.+..... +. ..+....+..+++++.+..+ .+++++|+|+++|+..++
T Consensus 30 ~~i~l~~g~p--~~~-~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~it~G~~~al~~~~ 106 (384)
T PRK06348 30 DIIDLSLGDP--DLI-TDESIINAAFEDAKKGHTRYTDSGGDVELIEEIIKYYSKNYDLSFKRNEIMATVGACHGMYLAL 106 (384)
T ss_pred CcEEcCCCCC--CCC-CCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCChhhEEEcCChHHHHHHHH
Confidence 4688887765 243 467777766554432111 11 11122335666666655432 789999999999999999
Q ss_pred HHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEE
Q 013008 173 KFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFV 252 (451)
Q Consensus 173 ~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ 252 (451)
+++. ++++.|++.+|+|.++.......+.... . .+..++..+ .-|+++|++.++++ +++|++
T Consensus 107 ~~~~-----------~~gd~vlv~~p~y~~~~~~~~~~g~~~~-~---~~~~~~~~~--~~d~~~l~~~~~~~-~~~v~l 168 (384)
T PRK06348 107 QSIL-----------DPGDEVIIHEPYFTPYKDQIEMVGGKPI-I---LETYEEDGF--QINVKKLEALITSK-TKAIIL 168 (384)
T ss_pred HHhc-----------CCCCEEEEeCCCCcchHHHHHHcCCEEE-E---ecCCcCcCC--cCCHHHHHHhhCcC-ccEEEE
Confidence 9765 2688999999999887655544332111 1 011000000 02789999988653 444444
Q ss_pred ccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCccccccccccc-CC---Ccceeeeccccc-CCccccccc
Q 013008 253 EPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHY-GI---FPDIMTLAKPLA-GGLPIGAAL 327 (451)
Q Consensus 253 ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~-~~---~pdi~t~sK~lg-~G~~iG~v~ 327 (451)
...++++| .+++.+.+++|.++|++||++||+||+|.+|...+.......+ +. ..-+.+|||.++ .|+|+||++
T Consensus 169 ~~p~NPtG-~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~v 247 (384)
T PRK06348 169 NSPNNPTG-AVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYEDFVPMATLAGMPERTITFGSFSKDFAMTGWRIGYVI 247 (384)
T ss_pred eCCCCCCC-cCCCHHHHHHHHHHHHHCCeEEEEecccccceeCCCccchhhcCCCcCcEEEEecchhccCCccccceeee
Confidence 43344445 4679999999999999999999999999887433321111111 11 222448999999 799999999
Q ss_pred ccHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH--------------HHhCCCCcceecc-cceeEEEEe
Q 013008 328 VTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS--------------KLARNPHVKDVRG-LGLIIGIEF 392 (451)
Q Consensus 328 ~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~--------------~~~~~~~~~~v~g-~G~~~~~~~ 392 (451)
+++++++.+.......+++.+++++.++..+|+. .+.+.++ .++.++.+....+ .|+++|+.+
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~~p~gg~~~~~~~ 325 (384)
T PRK06348 248 APDYIIETAKIINEGICFSAPTISQRAAIYALKH--RDTIVPLIKEEFQKRLEYAYKRIESIPNLSLHPPKGSIYAFINI 325 (384)
T ss_pred cCHHHHHHHHHHHHhccCCCCHHHHHHHHHHHhC--cHHHHHHHHHHHHHHHHHHHHHHhcCCCceeccCCeeEEEEEec
Confidence 9999988876444445677899999999888863 2222221 2233343332334 366778877
Q ss_pred c---CChHHHHHHHH-HCCceeeecCC-----CCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 013008 393 D---VSATPVVDACR-DSGLLVLTAGK-----GNVVRLVPPLIISEQELDQAVEILCKT 442 (451)
Q Consensus 393 ~---~~~~~~~~~l~-~~Gv~~~~~~~-----~~~iri~~~~~~t~e~i~~~l~~l~~~ 442 (451)
. .+..++++.|+ +.||.+.|+.. .+.+|++. ..+++++++++++|.+.
T Consensus 326 ~~~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~--~~~~~~l~~al~~l~~~ 382 (384)
T PRK06348 326 KKTGLSSVEFCEKLLKEAHVLVIPGKAFGESGEGYIRLAC--TVGIEVLEEAFNRIEKM 382 (384)
T ss_pred ccCCCCHHHHHHHHHHhCCEEEcCchhhccCCCCeEEEEe--cCCHHHHHHHHHHHHhh
Confidence 4 35678898887 46999987632 25788875 46899999999998753
No 135
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.93 E-value=1.1e-23 Score=209.73 Aligned_cols=310 Identities=22% Similarity=0.271 Sum_probs=210.9
Q ss_pred CCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHhhccC--CCeEEecCCHHHHHHHHHH
Q 013008 96 EGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSF--ADRVFFSNTGTEANEAAIK 173 (451)
Q Consensus 96 ~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~e~v~~~~sG~eA~~~al~ 173 (451)
++++++||.++.. .+| .+|.+.+++.+.+..... ++.....+|.+.++++++ .++|++++|+++++..+++
T Consensus 30 ~~~~~i~l~~~~~--~~~-~~~~~~~a~~~~~~~~~~----y~~~~~~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~ 102 (367)
T PRK02731 30 GIADIIKLASNEN--PLG-PSPKAIEAIRAAADELHR----YPDGSGFELKAALAEKFGVDPERIILGNGSDEILELLAR 102 (367)
T ss_pred CCCceEEecCCCC--CCC-CCHHHHHHHHHHHHhhcC----CCCCcHHHHHHHHHHHhCcCHHHEEEcCCHHHHHHHHHH
Confidence 5778999999854 466 578899999988765322 222224578888888876 5789999999999888777
Q ss_pred HHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEc
Q 013008 174 FARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVE 253 (451)
Q Consensus 174 ~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~e 253 (451)
.+. ++++.|++.+|+|+.+....... +..... .+. .+. ..|++++++.+++ ++++|+++
T Consensus 103 ~l~-----------~~gd~vl~~~p~y~~~~~~~~~~-g~~~~~---~~~-~~~----~~~~~~l~~~~~~-~~~~v~l~ 161 (367)
T PRK02731 103 AYL-----------GPGDEVIYSEHGFAVYPIAAQAV-GAKPVE---VPA-KDY----GHDLDAMLAAVTP-RTRLVFIA 161 (367)
T ss_pred Hhc-----------CCCCEEEEecCCHHHHHHHHHHc-CCeEEE---ecc-cCC----CCCHHHHHHHhCC-CCcEEEEe
Confidence 553 15889999999997665433222 211111 011 000 1278999998864 45666665
Q ss_pred cccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccc-cccccccCCCccee---eeccccc-CCcccccccc
Q 013008 254 PIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGY-LWAHEHYGIFPDIM---TLAKPLA-GGLPIGAALV 328 (451)
Q Consensus 254 p~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~-~~~~~~~~~~pdi~---t~sK~lg-~G~~iG~v~~ 328 (451)
.+++++|. ..+.+.++++.+.|+ +|+++|+||+|..+.+.+. .......+..++++ +|||.+| +|+|+||+++
T Consensus 162 ~p~nptG~-~~~~~~l~~l~~~~~-~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~ 239 (367)
T PRK02731 162 NPNNPTGT-YLPAEEVERFLAGVP-PDVLVVLDEAYAEYVRRKDYEDGLELVAKFPNVVVTRTFSKAYGLAGLRVGYGIA 239 (367)
T ss_pred CCCCCCCc-CCCHHHHHHHHHhCC-CCcEEEEECcHHHhccCcCcccHHHHHhhcCCEEEEeeehHhhcCcccceeeeeC
Confidence 55566665 456666777776664 5999999999987644332 11222222234444 8999997 6899999999
Q ss_pred cHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH--------------HHhCCCCcceecccceeEEEEec-
Q 013008 329 TEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS--------------KLARNPHVKDVRGLGLIIGIEFD- 393 (451)
Q Consensus 329 ~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~--------------~~~~~~~~~~v~g~G~~~~~~~~- 393 (451)
++++++.+.... .+++.+++++.++.++|+ ..++.++ .+++++ +...++.|.++++.+.
T Consensus 240 ~~~~~~~l~~~~--~~~~~~~~~~~~a~~~l~---~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~g~~~~i~~~~ 313 (367)
T PRK02731 240 PPEIIDALNRVR--QPFNVNSLALAAAVAALD---DDAFVEKSRALNAEGMAWLTEFLAELG-LEYIPSVGNFILVDFDD 313 (367)
T ss_pred CHHHHHHHHHcc--CCCCCCHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHHHHCC-CccCCCCceEEEEECCC
Confidence 999998886432 356678888888887775 2333222 223332 2234456889999883
Q ss_pred -CChHHHHHHHHHCCceeeecCC---CCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q 013008 394 -VSATPVVDACRDSGLLVLTAGK---GNVVRLVPPLIISEQELDQAVEILCKTLP 444 (451)
Q Consensus 394 -~~~~~~~~~l~~~Gv~~~~~~~---~~~iri~~~~~~t~e~i~~~l~~l~~~l~ 444 (451)
.++.++++.|.++||.+.++.. .+.+|++++ +.++++++++.|+++++
T Consensus 314 ~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~e~~~l~~aL~~~~~ 365 (367)
T PRK02731 314 GKDAAEAYQALLKRGVIVRPVAGYGLPNALRITIG---TEEENRRFLAALKEFLA 365 (367)
T ss_pred CCCHHHHHHHHHHCCEEEEeCCCCCCCCeEEEecC---CHHHHHHHHHHHHHHHh
Confidence 4678899999999999998642 257899754 78899999999998774
No 136
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.93 E-value=1.3e-23 Score=211.12 Aligned_cols=324 Identities=16% Similarity=0.119 Sum_probs=209.1
Q ss_pred CCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccCC--CCCHHHHHHHHHHhhccC----CCeEEecCCHHHHHHH
Q 013008 97 GREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNM--YYSIPQIELAKRLVACSF----ADRVFFSNTGTEANEA 170 (451)
Q Consensus 97 G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~--~~~~~~~~l~~~l~~~~~----~e~v~~~~sG~eA~~~ 170 (451)
+..++||..+... ++ .+|++.+++.+.+......+.. +....+..+++++.+.++ .+++++++|+++|+..
T Consensus 30 ~~~~~~l~~~~~~--~~-~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~ 106 (393)
T PRK05764 30 GRDVISLGAGEPD--FD-TPEHIKEAAIEALDDGKTKYTPAAGIPELREAIAAKLKRDNGLDYDPSQVIVTTGAKQALYN 106 (393)
T ss_pred cCCEEEeCCCCCC--CC-CCHHHHHHHHHHHhcCCCCcCCCCChHHHHHHHHHHHHHHhCCCCCHHHEEEeCCcHHHHHH
Confidence 4467888888763 32 5789999998887643221111 112224555555544333 5789999999999999
Q ss_pred HHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEE
Q 013008 171 AIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAV 250 (451)
Q Consensus 171 al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aav 250 (451)
+++.+.. +++.|++.+|+|.++...+... |..... .+..++..+ .-|++.+++.+++....++
T Consensus 107 ~~~~~~~-----------~gd~vl~~~p~y~~~~~~~~~~-g~~~~~---~~~~~~~~~--~~d~~~l~~~l~~~~~~v~ 169 (393)
T PRK05764 107 AFMALLD-----------PGDEVIIPAPYWVSYPEMVKLA-GGVPVF---VPTGEENGF--KLTVEQLEAAITPKTKALI 169 (393)
T ss_pred HHHHhcC-----------CCCEEEecCCCCcchHHHHHHc-CCEEEE---EecCcccCC--cCCHHHHHHhhCccceEEE
Confidence 8886541 5889999999998765443322 211111 011110000 0268999998865333444
Q ss_pred EEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCccccc-ccccc-----cCCCcceeeeccccc-CCccc
Q 013008 251 FVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYL-WAHEH-----YGIFPDIMTLAKPLA-GGLPI 323 (451)
Q Consensus 251 i~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~-~~~~~-----~~~~pdi~t~sK~lg-~G~~i 323 (451)
++.| ++++|. +++.+.+++|.++|++||+++|+||+|..+...+.. ..... .+....+.+|||.++ .|+|+
T Consensus 170 ~~~p-~NPtG~-~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~Ri 247 (393)
T PRK05764 170 LNSP-SNPTGA-VYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASLSPELRDRTITVNGFSKAYAMTGWRL 247 (393)
T ss_pred EECC-CCCCCc-ccCHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHcCCCCcCCEEEEecCcccccCcccee
Confidence 4545 444554 578889999999999999999999999876433321 11111 112223347999998 79999
Q ss_pred ccccccHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH--------------HHhCCCCcceecccc-eeE
Q 013008 324 GAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS--------------KLARNPHVKDVRGLG-LII 388 (451)
Q Consensus 324 G~v~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~--------------~~~~~~~~~~v~g~G-~~~ 388 (451)
||+++++++++.+.......+.+.+++++.++.++|+. .+++.++ .++.++.+...++.| .++
T Consensus 248 G~i~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~g~~~~ 325 (393)
T PRK05764 248 GYAAGPKELIKAMSKLQSHSTSNPTSIAQYAAVAALNG--PQDEVEEMRQAFEERRDLMVDGLNEIPGLECPKPEGAFYV 325 (393)
T ss_pred EEEecCHHHHHHHHHHHhhcccCCChHHHHHHHHHHcC--ChHHHHHHHHHHHHHHHHHHHHHhhCCCCcccCCCcceEE
Confidence 99999999998876443334556788888888888752 1222211 334454343344544 566
Q ss_pred EEEecC-------ChHHHHHHHHH-CCceeeecCC---CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 013008 389 GIEFDV-------SATPVVDACRD-SGLLVLTAGK---GNVVRLVPPLIISEQELDQAVEILCKTLPVL 446 (451)
Q Consensus 389 ~~~~~~-------~~~~~~~~l~~-~Gv~~~~~~~---~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~ 446 (451)
|+.+.. ...++.+.|++ +||.+.++.. .+++|++ +.++++++++++++|.+++++.
T Consensus 326 ~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~vRis--~~~~~~~~~~~i~~l~~~~~~~ 392 (393)
T PRK05764 326 FPNVSKLLGKSITDSLEFAEALLEEAGVAVVPGIAFGAPGYVRLS--YATSLEDLEEGLERIERFLESL 392 (393)
T ss_pred EEecccccccccCCHHHHHHHHHHhCCEEEccccccCCCCEEEEE--ecCCHHHHHHHHHHHHHHHHhh
Confidence 776632 13778888764 7999988642 3678885 5568999999999999998764
No 137
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.93 E-value=9e-24 Score=219.02 Aligned_cols=328 Identities=16% Similarity=0.164 Sum_probs=209.4
Q ss_pred cCCCEEEeeccCcccccCCC-CCHHHHHHHHHHHhhccccc-CCCCCHHHHHHHHHHhhcc--C--CCeEEecCCHHHHH
Q 013008 95 AEGREYLDLSSGIAVNALGH-GDADWIKAVVDQANVLTHVS-NMYYSIPQIELAKRLVACS--F--ADRVFFSNTGTEAN 168 (451)
Q Consensus 95 ~~G~~~iD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~~~-~~~~~~~~~~l~~~l~~~~--~--~e~v~~~~sG~eA~ 168 (451)
..|+.+|+|..|... ++|. .++++.+++.+++.....++ ..+..+.++++++++.+.. + .++|++++|+++|+
T Consensus 143 ~~g~~~i~l~~G~p~-~~~~~~p~~~~~~~~~~~~~~~~Y~~~~G~~~lReaia~~~~~~~~~~~~~~~I~it~G~~eal 221 (517)
T PRK13355 143 AAGTHILKLNIGNPA-PFGFRTPDEVVYDMAQQLTDTEGYSDSKGLFSARKAIMQYAQLKGLPNVDVDDIYTGNGVSELI 221 (517)
T ss_pred HcCCCeEEecCcCCC-cCCCCCCHHHHHHHHHHhhcCCCCCCCcChHHHHHHHHHHHHhcCCCCCChhHEEEeCcHHHHH
Confidence 357889999987653 4565 47789999888776432211 1112223555555554432 2 67999999999999
Q ss_pred HHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeE
Q 013008 169 EAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTA 248 (451)
Q Consensus 169 ~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a 248 (451)
..+++++. +++|.|++.+|+|..+...+...++..... +..++..+. .|++++++.+.++..+
T Consensus 222 ~~~~~~l~-----------~~Gd~Vli~~P~y~~y~~~~~~~g~~~v~~----~~~~~~~~~--~d~~~l~~~~~~~~k~ 284 (517)
T PRK13355 222 NLSMSALL-----------DDGDEVLIPSPDYPLWTACVNLAGGTAVHY----RCDEQSEWY--PDIDDIRSKITSRTKA 284 (517)
T ss_pred HHHHHHhC-----------CCCCEEEEcCCCCcCHHHHHHHCCCEEEEe----ecCcccCCC--CCHHHHHHhcCcCceE
Confidence 99998664 268999999999998875544333322111 111111111 2889999998764455
Q ss_pred EEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccc-cccccCCCcc-----eeeeccccc-CCc
Q 013008 249 AVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLW-AHEHYGIFPD-----IMTLAKPLA-GGL 321 (451)
Q Consensus 249 avi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~-~~~~~~~~pd-----i~t~sK~lg-~G~ 321 (451)
++++.|.| ++|. +.+.+.+++|.++|++||++||+||+|..|-+.|..+ .... ..++ +-+|||.++ .|+
T Consensus 285 i~i~nP~N-PTG~-v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~~s~~~--~~~~~~vi~~~S~SK~~~~~G~ 360 (517)
T PRK13355 285 IVIINPNN-PTGA-LYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHTSIAS--LAPDLFCVTFSGLSKSHMIAGY 360 (517)
T ss_pred EEEECCCC-CCCc-CcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCcccHHH--hCCCCeEEEEecchhhccCccc
Confidence 66777754 4454 5789999999999999999999999998875444311 1111 1233 236899987 599
Q ss_pred ccccccc--cHHH----HhhccCCCccCCCCCcHHHHHHHHHHHHHhcC-hHHH-------HH------HHhCCCCccee
Q 013008 322 PIGAALV--TEKV----ASAINYGDHGSTFAGSPLVCNAAIAVLDKISN-PAFL-------AS------KLARNPHVKDV 381 (451)
Q Consensus 322 ~iG~v~~--~~~i----~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~-------~~------~~~~~~~~~~v 381 (451)
|+||+++ ++++ ++.+... ....++.|.+++.++.++|+.... .++. ++ .++.++.+...
T Consensus 361 RiG~~i~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~q~a~~~aL~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~ 439 (517)
T PRK13355 361 RIGWMILSGNKRIAKDYIEGLNML-ANMRLCSNVPAQSIVQTALGGHQSVKDYLVPGGRVYEQRELVYNALNAIPGISAV 439 (517)
T ss_pred ceEEEEeeCchhhHHHHHHHHHHH-hcCcCCcChHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHhcCCCcccC
Confidence 9999984 4443 3333211 122345678888888888852110 1111 11 33455555555
Q ss_pred ccccee-EEEEecC------ChHHHHH-HHHHCCceeeecC-----CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHh
Q 013008 382 RGLGLI-IGIEFDV------SATPVVD-ACRDSGLLVLTAG-----KGNVVRLVPPLIISEQELDQAVEILCKTLPVLD 447 (451)
Q Consensus 382 ~g~G~~-~~~~~~~------~~~~~~~-~l~~~Gv~~~~~~-----~~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~~ 447 (451)
.+.|.| +|+.++. +...++. .|.++||.+.|+. ..+++|++. ..++++|++++++|.++++..+
T Consensus 440 ~p~g~fy~~~~l~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~Ris~--~~~~~~l~~a~~rl~~~~~~~~ 516 (517)
T PRK13355 440 KPKAAFYIFPKIDVKKFNIHDDEQFALDLLHDKKVLIVQGTGFNWDKPDHFRVVY--LPRLEDLEDAMDRLADFFSYYR 516 (517)
T ss_pred CCCeeeEEEeecCcccCCCCCHHHHHHHHHHhCCEEEeCcchhCCCCcCEEEEEe--CCCHHHHHHHHHHHHHHHHHhh
Confidence 566655 4446642 2445554 4567899998863 136788865 5789999999999999987653
No 138
>PRK06855 aminotransferase; Validated
Probab=99.93 E-value=1.2e-23 Score=213.35 Aligned_cols=328 Identities=15% Similarity=0.090 Sum_probs=201.9
Q ss_pred CCEEEeeccCcccccCCC-CCHHHHHHHHHHHhhcc---cccCCCCCHHHHHHHHHHhhccC----CCeEEecCCHHHHH
Q 013008 97 GREYLDLSSGIAVNALGH-GDADWIKAVVDQANVLT---HVSNMYYSIPQIELAKRLVACSF----ADRVFFSNTGTEAN 168 (451)
Q Consensus 97 G~~~iD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~---~~~~~~~~~~~~~l~~~l~~~~~----~e~v~~~~sG~eA~ 168 (451)
|+.++++..|.... .+. .++.+.+++.+.+.+.. +....+....++.+++++.+..+ .++|++|+|+++|+
T Consensus 31 g~~~~~~~~G~p~~-~~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~I~it~G~~~al 109 (433)
T PRK06855 31 GVKITWENIGDPIA-KGEKIPDWMKEIVAELVMDDKSYGYCPTKGVLETREFLAELNNKRGGAQITPDDIIFFNGLGDAI 109 (433)
T ss_pred cccccccccCCCcc-cCCCCCHHHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHhccCCCCCHhHEEEcCcHHHHH
Confidence 45566665554311 233 46678888888765421 11112233446677777766543 77899999999999
Q ss_pred HHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCC-CC-
Q 013008 169 EAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQP-GK- 246 (451)
Q Consensus 169 ~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~-~~- 246 (451)
..++.+ . .++|.|++.+|+|+++........+..... .+..+...+ ..|+++|++.+.. .+
T Consensus 110 ~~~~~l-~-----------~~Gd~Vlv~~P~Y~~~~~~~~~~~g~~~v~---v~~~~~~~~--~~d~~~l~~~~~~~~~~ 172 (433)
T PRK06855 110 AKIYGL-L-----------RREARVIGPSPAYSTHSSAEAAHAGYPPVT---YRLDPENNW--YPDLDDLENKVKYNPSI 172 (433)
T ss_pred HHHHHh-c-----------CCCCeEEEeCCCCchHHHHHHHhcCCeEEE---EecccccCC--CCCHHHHHHHHhcCCCc
Confidence 888752 2 168999999999998653322221211100 111111000 0278999999863 23
Q ss_pred eEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccc-cc-ccc-C-CCcceeeeccccc-CCc
Q 013008 247 TAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLW-AH-EHY-G-IFPDIMTLAKPLA-GGL 321 (451)
Q Consensus 247 ~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~-~~-~~~-~-~~pdi~t~sK~lg-~G~ 321 (451)
.+++++.|.|++ | .+++.+.+++|.++|++||++||+||+|..+-+.+..+ .. ... + ...-+.+|||.++ .|+
T Consensus 173 ~~i~l~~P~NPT-G-~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~sl~~~~~~~~~I~~~S~SK~~~~pGl 250 (433)
T PRK06855 173 AGILLINPDNPT-G-AVYPKEILREIVDIAREYDLFIICDEIYNNIVYNGKKTVPLSEVIGDVPGIALKGISKELPWPGS 250 (433)
T ss_pred eEEEEECCCCCC-C-cCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCCHHHHcCcCCeEEEecCccccCCCcc
Confidence 445566665444 4 46899999999999999999999999999875444311 11 111 1 1233458999997 799
Q ss_pred cccccccc-----H---HHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH--------------HHhCCCCcc
Q 013008 322 PIGAALVT-----E---KVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS--------------KLARNPHVK 379 (451)
Q Consensus 322 ~iG~v~~~-----~---~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~--------------~~~~~~~~~ 379 (451)
|+||++++ + .+++.+..... ...+.+.++|.++.++|+.-.-++++++ .++.++.+.
T Consensus 251 RiG~ii~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~ 329 (433)
T PRK06855 251 RCGWIEVYNADKDEVFKKYINSILNAKM-IEVCSTTLPQMAIPRIMSHPEYKNYLKERNKRYEKRSNIAYEKLKDVPGLK 329 (433)
T ss_pred eEEEEEEeCCchhhHHHHHHHHHHHhhc-cccCCChHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCee
Confidence 99999972 2 33343322211 2345678889888888752111233322 234444333
Q ss_pred eecc-cceeEEEEecC-----------------------------ChHHHHHH-HHHCCceeeecCC----CCEEEEeCC
Q 013008 380 DVRG-LGLIIGIEFDV-----------------------------SATPVVDA-CRDSGLLVLTAGK----GNVVRLVPP 424 (451)
Q Consensus 380 ~v~g-~G~~~~~~~~~-----------------------------~~~~~~~~-l~~~Gv~~~~~~~----~~~iri~~~ 424 (451)
..++ .|+++|+.+.. +..+++.. +.++||.+.|+.. ++.+|++..
T Consensus 330 ~~~p~gg~~~w~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~PG~~F~~~~~~~Rls~~ 409 (433)
T PRK06855 330 VNRTNGAFYMTVVFEDGVLNNKQSLPIENPEVKEYVEGLVKGPVSPDKRFVYYLLASTGICVVPLSSFCTELNGFRVTLL 409 (433)
T ss_pred ccCCCeeEEEeeccccccccccccCCcchhhhHHHHHHHHhcCCCchHHHHHHHHHHcCEEEecCCcCCCCCCceEEEEC
Confidence 3334 35788887742 13455544 4577999998732 235788665
Q ss_pred CCCCHHHHHHHHHHHHHHHHHH
Q 013008 425 LIISEQELDQAVEILCKTLPVL 446 (451)
Q Consensus 425 ~~~t~e~i~~~l~~l~~~l~~~ 446 (451)
. .++|+|++++++|.+++++.
T Consensus 410 ~-~~~~~i~~~~~~l~~~~~~~ 430 (433)
T PRK06855 410 E-RDEEKFEWIYQTLAEKIEEY 430 (433)
T ss_pred C-CcHHHHHHHHHHHHHHHHHH
Confidence 4 48999999999999999764
No 139
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.93 E-value=1.4e-23 Score=209.24 Aligned_cols=316 Identities=15% Similarity=0.089 Sum_probs=205.6
Q ss_pred CEEEeeccCcccccCCCCCHHHHHHHHHHHhhcc---cccCCCCCHHHHHHHHHHhhc------cCCCeEEecCCHHHHH
Q 013008 98 REYLDLSSGIAVNALGHGDADWIKAVVDQANVLT---HVSNMYYSIPQIELAKRLVAC------SFADRVFFSNTGTEAN 168 (451)
Q Consensus 98 ~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~---~~~~~~~~~~~~~l~~~l~~~------~~~e~v~~~~sG~eA~ 168 (451)
..++|+.+|.. +++ .+|.+.+++.+.+.... .++..+....+..+++++.+. ...++|++|+|+++|+
T Consensus 28 ~~~~~l~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~Y~~~G~~~Lr~aia~~~~~~~~~~~~v~~~~I~it~Ga~~al 104 (374)
T PRK02610 28 IQLDRLDTNEF--PYD-LPPDLKQKLAWLYQQGIESNRYPDGGHEALKQAIAEYVNESAAGSSQITPANISVGNGSDELI 104 (374)
T ss_pred cceeEecCCCC--CCC-CCHHHHHHHHHHHhhcccccCCCCCchHHHHHHHHHHhCccccccCCCCHHHEEEcCChHHHH
Confidence 45888888865 344 67889999998776521 111111122244555555433 2257899999999999
Q ss_pred HHHHHHHHHHhhhcCCCCCCCC-ceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCC---
Q 013008 169 EAAIKFARKFQRHSNPDSKEPA-TEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQP--- 244 (451)
Q Consensus 169 ~~al~~a~~~~~~~~~~~~~~~-~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~--- 244 (451)
..++.+... ++ ++|++.+|+|.++...+...+.... . .+..++... -|+++|+++++.
T Consensus 105 ~~~~~~~~~-----------~g~~~Vlv~~P~y~~~~~~~~~~g~~~~-~---~~~~~~~~~---~d~~~l~~~~~~~~~ 166 (374)
T PRK02610 105 RSLLIATCL-----------GGEGSILVAEPTFSMYGILAQTLGIPVV-R---VGRDPETFE---IDLAAAQSAIEQTQN 166 (374)
T ss_pred HHHHHHHcC-----------CCCCeEEEcCCChHHHHHHHHHcCCEEE-E---ecCCcccCC---CCHHHHHHHHHhhcC
Confidence 877764431 34 4799999999887655433332111 1 111111000 278999988863
Q ss_pred CCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccccccCCCcceeeeccccc-CCccc
Q 013008 245 GKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLA-GGLPI 323 (451)
Q Consensus 245 ~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~t~sK~lg-~G~~i 323 (451)
.++++|++.+.++++|. ..+.+.+++|.++| ++++||+||+|..|.............-..-+-+|||.+| .|+|+
T Consensus 167 ~~~k~i~l~~P~NPTG~-~~s~~~l~~l~~~~--~~~~iI~De~Y~~~~~~~~~~~~~~~~~~ivi~SfSK~~g~~GlRi 243 (374)
T PRK02610 167 PPVRVVFVVHPNSPTGN-PLTAAELEWLRSLP--EDILVVIDEAYFEFSQTTLVGELAQHPNWVILRTFSKAFRLAAHRV 243 (374)
T ss_pred CCceEEEEeCCCCCCCC-CCCHHHHHHHHhcc--CCcEEEEeccccccCccchHHHHhcCCCEEEEEecchhccCcccce
Confidence 46677766555666665 56888899999987 4999999999988732111111111111112448999997 69999
Q ss_pred ccccccHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH-------------HHhCCCCcceecccceeEEE
Q 013008 324 GAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS-------------KLARNPHVKDVRGLGLIIGI 390 (451)
Q Consensus 324 G~v~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~-------------~~~~~~~~~~v~g~G~~~~~ 390 (451)
||+++++++++.+.... ..++.+.+++.++.++++.. +.+.+. .++.++.+...+..|.++|+
T Consensus 244 G~~v~~~~l~~~l~~~~--~~~~~~~~~q~a~~~~l~~~--~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p~~g~f~~~ 319 (374)
T PRK02610 244 GYAIGHPELIAVLEKVR--LPYNLPSFSQLAAQLALEHR--QELLAAIPEILQERDRLYQALQELPQLRVWPSAANFLYL 319 (374)
T ss_pred eeeecCHHHHHHHHHhc--CCCCCCHHHHHHHHHHhcCH--HHHHHHHHHHHHHHHHHHHHHHhCCCcEeCCCcceEEEE
Confidence 99999999998876432 34566888888888877521 222221 22444444334566888888
Q ss_pred Eec--CChHHHHHHHHHCCceeeecCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 013008 391 EFD--VSATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTLPVL 446 (451)
Q Consensus 391 ~~~--~~~~~~~~~l~~~Gv~~~~~~~~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~ 446 (451)
.+. .+..++++.|.++||.+.+.. +.+|++.. +.+++++++++|+++++.+
T Consensus 320 ~l~~~~~~~~~~~~l~~~gi~v~~~~--~~lRls~~---~~~~~~~~l~~l~~~l~~~ 372 (374)
T PRK02610 320 RLSQDAALAALHQALKAQGTLVRHTG--GGLRITIG---TPEENQRTLERLQAALTQL 372 (374)
T ss_pred eCCCCCCHHHHHHHHHHCCEEEEeCC--CeEEEeCC---CHHHHHHHHHHHHHHHhhc
Confidence 874 356789999999999998642 67899644 4677999999999988754
No 140
>PLN02656 tyrosine transaminase
Probab=99.93 E-value=3.2e-23 Score=209.07 Aligned_cols=328 Identities=16% Similarity=0.177 Sum_probs=211.2
Q ss_pred CCCEEEeeccCcccccC-CCCCHHHHHHHHHHHhhcc-ccc--CCCCCHHHHHHHHHHhhccC----CCeEEecCCHHHH
Q 013008 96 EGREYLDLSSGIAVNAL-GHGDADWIKAVVDQANVLT-HVS--NMYYSIPQIELAKRLVACSF----ADRVFFSNTGTEA 167 (451)
Q Consensus 96 ~G~~~iD~~~~~~~~~l-G~~~p~v~~a~~~~~~~~~-~~~--~~~~~~~~~~l~~~l~~~~~----~e~v~~~~sG~eA 167 (451)
.|+.+|+|..|...... -..++.+++++.+.+.... ..+ ..+....+..+++++.+..+ .++|++|+|+++|
T Consensus 29 ~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~a 108 (409)
T PLN02656 29 NGKRVISLGMGDPTAYSCFHTTHVAQEAVVDALQSNKFNGYAPTVGLPQARRAIAEYLSRDLPYKLSLDDVFITSGCTQA 108 (409)
T ss_pred cCCeeeecCCCCCCcCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCcccEEEeCChHHH
Confidence 67889999888764322 2367889999988876521 111 11222335566666655433 6799999999999
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCe
Q 013008 168 NEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKT 247 (451)
Q Consensus 168 ~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~ 247 (451)
+..++.++. +++|.|++.+|+|..+.......+..... .+..+...+ .-|++++++++.++..
T Consensus 109 l~~~~~~l~-----------~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~----i~~~~~~~~--~~d~~~l~~~~~~~~~ 171 (409)
T PLN02656 109 IDVALSMLA-----------RPGANILLPRPGFPIYELCAAFRHLEVRY----VDLLPEKGW--EVDLDAVEALADQNTV 171 (409)
T ss_pred HHHHHHHHh-----------CCCCeEEEeCCCCCcHHHHHHHcCCEEEE----EeCCCcCCC--CCCHHHHHHHhccCce
Confidence 999998764 16899999999997664333222211110 111110000 0278999998876566
Q ss_pred EEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccc-cccccC---CCcceeeeccccc-CCcc
Q 013008 248 AAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLW-AHEHYG---IFPDIMTLAKPLA-GGLP 322 (451)
Q Consensus 248 aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~-~~~~~~---~~pdi~t~sK~lg-~G~~ 322 (451)
+++++.|.| ++|. +++.+.+++|.++|++||++||+||+|.+|-..+..+ ....++ ....+.+|||.++ .|+|
T Consensus 172 ~v~l~~P~N-PtG~-~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlR 249 (409)
T PLN02656 172 ALVIINPGN-PCGN-VYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGVFGSIVPVLTLGSLSKRWIVPGWR 249 (409)
T ss_pred EEEEECCCC-CCCC-CCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCcccHHHhcccCcEEEEcccchhccCccee
Confidence 677777754 4443 5789999999999999999999999998875444321 111111 1223447999966 6999
Q ss_pred ccccccc--------HHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH--------------HHhCCCCcc-
Q 013008 323 IGAALVT--------EKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS--------------KLARNPHVK- 379 (451)
Q Consensus 323 iG~v~~~--------~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~--------------~~~~~~~~~- 379 (451)
+||++++ +++++.+..... ...+.+++++.++.++|+.. .+.++++ .++.++...
T Consensus 250 iG~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~q~a~~~~l~~~-~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~ 327 (409)
T PLN02656 250 LGWFVTTDPSGSFRDPKIVERIKKYFD-ILGGPATFIQAAVPTILEQT-DESFFKKTINILKQSSDICCDRIKEIPCITC 327 (409)
T ss_pred EEEEEEeCcccccccHHHHHHHHHHHh-hhcCCCHHHHHHHHHHHhcC-cHHHHHHHHHHHHHHHHHHHHHHhhCCCCcC
Confidence 9999983 577777653211 12346788999998888631 1233322 233344322
Q ss_pred eecc-cceeEEEEecC-------ChHHH-HHHHHHCCceeeecC---CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 013008 380 DVRG-LGLIIGIEFDV-------SATPV-VDACRDSGLLVLTAG---KGNVVRLVPPLIISEQELDQAVEILCKTLPVL 446 (451)
Q Consensus 380 ~v~g-~G~~~~~~~~~-------~~~~~-~~~l~~~Gv~~~~~~---~~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~ 446 (451)
..++ .|+++|+.++. ...++ .+.|.++||.+.|+. ..+++|+++. .+++++++++++|.+++...
T Consensus 328 ~~~p~gg~~~w~~l~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~fg~~~~iRi~~~--~~~e~l~eal~rl~~~~~~~ 404 (409)
T PLN02656 328 PHKPEGSMAVMVKLNLSLLEDISDDIDFCFKLAREESVIILPGTAVGLKNWLRITFA--ADPSSLEEALGRIKSFYLRH 404 (409)
T ss_pred CcCCCeEEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEecchhcCCCCeEEEEeC--CCHHHHHHHHHHHHHHHHHh
Confidence 1233 46778887731 23344 456678899999873 2467888655 48999999999999988754
No 141
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.93 E-value=2.3e-23 Score=203.85 Aligned_cols=305 Identities=20% Similarity=0.218 Sum_probs=220.6
Q ss_pred EEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHhhccC---CCeEEecCCHHHHHHHHHHHH
Q 013008 99 EYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSF---ADRVFFSNTGTEANEAAIKFA 175 (451)
Q Consensus 99 ~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~---~e~v~~~~sG~eA~~~al~~a 175 (451)
.++|+.+|-. ++| .+|.+.+++.+.++.+ ..|+.....+|.+.+++.++ .+.|+.++|..|.+...+++.
T Consensus 23 ~~i~LssNen--P~g-p~~~~~~~~~~~~~~~----~rYPd~~~~~l~~a~a~~~~~~~~~~V~~gnGsde~i~~l~~~~ 95 (356)
T COG0079 23 GIIKLSSNEN--PYG-PPPKVIEAIRAALDKL----NRYPDPDYRELRAALAEYYGVVDPENVLVGNGSDELIELLVRAF 95 (356)
T ss_pred cceeecCCCC--CCC-CCHHHHHHHHHHHHhh----ccCCCCcHHHHHHHHHHHhCCCCcceEEEcCChHHHHHHHHHHh
Confidence 6899999865 676 5588999998888753 33555567888899988887 579999999999999999977
Q ss_pred HHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEccc
Q 013008 176 RKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPI 255 (451)
Q Consensus 176 ~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~ 255 (451)
+. ++|+|++..|+|.-+...+...+.... . .+..+ +. .|++.+.+.+.++...+++|+|+
T Consensus 96 ~~-----------~gd~vl~~~Ptf~~Y~~~a~~~g~~~~-~---v~~~~-~~----~d~~~~~~~~~~~~~lv~i~nPN 155 (356)
T COG0079 96 VE-----------PGDTVLIPEPTFSMYEIAAQLAGAEVV-K---VPLKE-FR----LDLDAILAAIRDKTKLVFLCNPN 155 (356)
T ss_pred hc-----------CCCEEEEcCCChHHHHHHHHhcCCeEE-E---ecccc-cc----cCHHHHHHhhhcCCCEEEEeCCC
Confidence 72 678999999999877655544332211 1 11111 11 37888888886634455666676
Q ss_pred cCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccccccCCCccee---eeccccc-CCcccccccccHH
Q 013008 256 QGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIM---TLAKPLA-GGLPIGAALVTEK 331 (451)
Q Consensus 256 ~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~---t~sK~lg-~G~~iG~v~~~~~ 331 (451)
|++| . ..+.+.++++.+.|.+ +++||+||+|.+|.. . .......-.++++ ||||++| +|+|+||++++++
T Consensus 156 NPTG-~-~~~~~~l~~l~~~~~~-~~~vVvDEAY~eF~~--~-~~~~l~~~~~nlivlRTfSKa~gLAGlRlGy~ia~~~ 229 (356)
T COG0079 156 NPTG-T-LLPREELRALLEALPE-GGLVVIDEAYIEFSP--E-SSLELLKYPPNLIVLRTFSKAFGLAGLRVGYAIANPE 229 (356)
T ss_pred CCCC-C-CCCHHHHHHHHHhCCC-CcEEEEeCchhhcCC--c-hhhhhccCCCCEEEEEecHHhhhcchhceeeccCCHH
Confidence 6665 3 4688889999999888 999999999999854 1 1122212123243 8999999 6999999999999
Q ss_pred HHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH--------------HHhCCCCcc-eecccceeEEEEecC-C
Q 013008 332 VASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS--------------KLARNPHVK-DVRGLGLIIGIEFDV-S 395 (451)
Q Consensus 332 i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~--------------~~~~~~~~~-~v~g~G~~~~~~~~~-~ 395 (451)
+++.++.. ...|+.|.++++++.++|+.- ++.+. .++.++ +. ..+..+.|+.+.+.. .
T Consensus 230 ~i~~l~~v--r~p~~v~~~a~~aa~aal~~~---~~~~~~~~~~~~~r~rl~~~l~~~~-~~~v~pS~aNFvlv~~~~~~ 303 (356)
T COG0079 230 LIAALNKV--RPPFNVSSPALAAAIAALRDA---DYLEESVERIREERERLYAALKALG-LFGVFPSQANFVLVRVPDAE 303 (356)
T ss_pred HHHHHHHh--cCCCCCCHHHHHHHHHHcccH---HHHHHHHHHHHHHHHHHHHHHHhCC-CCeecCCCCcEEEEECCCcc
Confidence 99999743 567888999999999988632 33222 334444 22 355668888888732 2
Q ss_pred hHHHHHHHHHCCceeeecCC----CCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 013008 396 ATPVVDACRDSGLLVLTAGK----GNVVRLVPPLIISEQELDQAVEILCKTLPV 445 (451)
Q Consensus 396 ~~~~~~~l~~~Gv~~~~~~~----~~~iri~~~~~~t~e~i~~~l~~l~~~l~~ 445 (451)
+..+.+.|+++||+++.+.. .+++|+++ -|+|+.++++++|.++++.
T Consensus 304 ~~~l~~~L~~~giivR~~~~~~~~~~~lRitv---gt~een~~ll~AL~~~~~~ 354 (356)
T COG0079 304 AAALAEALLKKGILVRDCSSVGLLPGYLRITV---GTPEENDRLLAALREVLKG 354 (356)
T ss_pred HHHHHHHHHHCCEEEEeCCCCCCCCCeEEEEe---CCHHHHHHHHHHHHHHHhc
Confidence 55799999999999998742 35899964 4888889999999988754
No 142
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.93 E-value=2.6e-23 Score=208.30 Aligned_cols=317 Identities=15% Similarity=0.134 Sum_probs=205.7
Q ss_pred CCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcc-cccC--CCCCHHHHHHHHHHhhccC----CC-eEEecCCHHHH
Q 013008 96 EGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLT-HVSN--MYYSIPQIELAKRLVACSF----AD-RVFFSNTGTEA 167 (451)
Q Consensus 96 ~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~-~~~~--~~~~~~~~~l~~~l~~~~~----~e-~v~~~~sG~eA 167 (451)
.|..++||..|.. .++ .++.+.+++.+.+.... +.+. .+..+.+.++++++.+.++ .+ .|++|+|+++|
T Consensus 27 ~~~~~~~l~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~vi~t~G~~~~ 103 (383)
T TIGR03540 27 EGVDVISLGIGDP--DLP-TPKHIVEALCKAAENPENHRYPSYEGMLAYRQAVADWYKRRFGVELDPETEVLSLIGSKEG 103 (383)
T ss_pred cCCCeEEeCCCCC--CCC-CCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCeEEECCCcHHH
Confidence 3567788888865 344 46788999888765321 1111 1122335666666665433 34 68999999999
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCC--CeeEeeCCCHHHHHHhcCCC
Q 013008 168 NEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMP--GVNFVEYGNIEATRKLIQPG 245 (451)
Q Consensus 168 ~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~d~~~le~~l~~~ 245 (451)
+..++++.. .++|.|++.+|+|.++.......+.... . .+... +.. -|++++++.+.+
T Consensus 104 l~~~~~~~~-----------~~gd~vlv~~P~y~~~~~~~~~~G~~v~-~---v~~~~~~g~~----~d~~~l~~~~~~- 163 (383)
T TIGR03540 104 IAHIPLAFV-----------NPGDIVLVPDPGYPVYRIGTLFAGGEPY-E---MPLKEENGFL----PDFDAIPEDIAK- 163 (383)
T ss_pred HHHHHHHhC-----------CCCCEEEEeCCCCcchHHHHHhcCCEEE-E---EecCcccCCc----cCHHHHHhhccc-
Confidence 999988654 2689999999999887655433332111 1 11111 111 278899888864
Q ss_pred CeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCccccc-ccc-cc---cCCCcceeeeccccc-C
Q 013008 246 KTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYL-WAH-EH---YGIFPDIMTLAKPLA-G 319 (451)
Q Consensus 246 ~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~-~~~-~~---~~~~pdi~t~sK~lg-~ 319 (451)
++++|++...++++| ..++.+.+++|.++|++||+++|+||+|..+...+.. ... .. .+....+.+|||.+| .
T Consensus 164 ~~~~v~i~~P~NPtG-~~~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~ 242 (383)
T TIGR03540 164 KAKLMFINYPNNPTG-AVAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLEVDGAKDVGIEFHSLSKTYNMT 242 (383)
T ss_pred cceEEEEeCCCCCcC-ccCCHHHHHHHHHHHHHcCEEEEEecchhhhccCCCCCcCcccCCCcccCEEEEEecccccCCc
Confidence 455666553344455 4679999999999999999999999999876443321 111 11 122344568999997 6
Q ss_pred CcccccccccHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH--------------HHhCCCCcceecc-c
Q 013008 320 GLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS--------------KLARNPHVKDVRG-L 384 (451)
Q Consensus 320 G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~--------------~~~~~~~~~~v~g-~ 384 (451)
|+|+||+++++++++.+.........+.+.+.+.++.++|+. .+++.++ .++++. +....+ .
T Consensus 243 GlRiG~~i~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~L~~~~-~~~~~~~~ 319 (383)
T TIGR03540 243 GWRIGMAVGNADLIAGLGKVKTNVDSGVFQAIQYAAIAALNG--PQDVVKEIRKIYQRRRDLLLEALKKIG-IDVEKPKA 319 (383)
T ss_pred cceeeEEeCCHHHHHHHHHHHHhcccCCChHHHHHHHHHHhC--CHHHHHHHHHHHHHHHHHHHHHHHhCC-CEecCCCc
Confidence 999999999999988875432223345566778888777753 2333322 223332 322333 3
Q ss_pred ceeEEEEec--CChHHHHHHHH-HCCceeeecCC-----CCEEEEeCCCCCCHHHHHHHHHHHHH
Q 013008 385 GLIIGIEFD--VSATPVVDACR-DSGLLVLTAGK-----GNVVRLVPPLIISEQELDQAVEILCK 441 (451)
Q Consensus 385 G~~~~~~~~--~~~~~~~~~l~-~~Gv~~~~~~~-----~~~iri~~~~~~t~e~i~~~l~~l~~ 441 (451)
|+++|+.++ .+..++++.|+ ++||.+.|+.. .+++|++.+ .+++++++++++|.+
T Consensus 320 ~~~~~~~l~~~~~~~~~~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~--~~~~~l~~~l~~l~~ 382 (383)
T TIGR03540 320 TFYVWVPVPEGYTSAEFAARLLEETGVVVTPGVGFGEYGEGYIRISLT--VPDERLEEAVARIKK 382 (383)
T ss_pred ceEEEEECCCCCCHHHHHHHHHHHCCEEEecchhhCccCCCeEEEEec--CCHHHHHHHHHHHhh
Confidence 666788874 35678898886 57999998621 257888654 678888888888764
No 143
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.92 E-value=1.7e-23 Score=205.42 Aligned_cols=290 Identities=13% Similarity=0.083 Sum_probs=194.8
Q ss_pred CCC-CCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHhhccCC--CeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCC
Q 013008 112 LGH-GDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFA--DRVFFSNTGTEANEAAIKFARKFQRHSNPDSKE 188 (451)
Q Consensus 112 lG~-~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~--e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~ 188 (451)
||. .||+|+++..+++++++ ++.+.+.+|+++|+++++. +.+++++||++||..++.++. .
T Consensus 30 lgl~~~~~~~~~~~~~~~~~~-----g~~~~~~~Le~~lA~~~g~~~e~ilv~~gg~~a~~~~~~al~-----------~ 93 (346)
T TIGR03576 30 TGLAGGFKIDEEDLELLETYV-----GPAIFEEKVQELGREHLGGPEEKILVFNRTSSAILATILALE-----------P 93 (346)
T ss_pred ccCCCChhHHHHHHHHHHHhc-----CCHHHHHHHHHHHHHHcCCCcceEEEECCHHHHHHHHHHHhC-----------C
Confidence 555 69999999999998863 3457799999999999985 899999999999999998665 2
Q ss_pred CCceEEEEcC--CccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEccccCCCCccccCH
Q 013008 189 PATEFVSFTN--SFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATK 266 (451)
Q Consensus 189 ~~~~ii~~~~--~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~ 266 (451)
+++.|+++.| .+|.+......+.+.. ++.++|+++++. . .+..+|++++ .+++|.+ .+.
T Consensus 94 ~gd~Vli~~~d~p~~~s~~~~~~l~ga~--------------~~~~~~l~~l~~-~--~~~~lIiitg-~s~~G~v-~~~ 154 (346)
T TIGR03576 94 PGRKVVHYLPEKPAHPSIPRSCKLAGAE--------------YFESDELSELKK-I--DGTSLVVITG-STMDLKV-VSE 154 (346)
T ss_pred CCCEEEECCCCCCCchhHHHHHHHcCCE--------------EeccCCHHHHhh-C--cCceEEEEEC-CCCCCcc-cCH
Confidence 6888887533 3555554444444321 122356766543 2 2356777776 4667764 467
Q ss_pred HHHHHHHHHHHHhCCEEEEeccccCC--CcccccccccccCCCcceeeecccccCCcccccccccHHHHhhccCCCccCC
Q 013008 267 EFLQFLRDACDDAGALLVFDEVQCGL--GRTGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINYGDHGST 344 (451)
Q Consensus 267 ~~l~~l~~l~~~~g~llI~DEv~tg~--gr~G~~~~~~~~~~~pdi~t~sK~lg~G~~iG~v~~~~~i~~~~~~~~~~~t 344 (451)
+.|++|.++|++||+++|+||+|..+ +..|.. ....++...-+.||||+++ |+++||+++++++++.+........
T Consensus 155 ~~L~~i~~la~~~~~~livDEAy~~~~~~~~~~~-~~~~~~~divv~s~SKala-G~r~G~v~~~~~li~~l~~~~~~~~ 232 (346)
T TIGR03576 155 EDLKRVIKQAKSKEAIVLVDDASGARVRRLYGQP-PALDLGADLVVTSTDKLMD-GPRGGLLAGRKELVDKIKSVGEQFG 232 (346)
T ss_pred HHHHHHHHHHHHcCCEEEEECCccccccccCCCC-CHHHcCCcEEEeccchhcc-ccceEEEEeCHHHHHHHHHhhcCcc
Confidence 88999999999999999999999642 112322 1223332222347899764 5789999999999999876544455
Q ss_pred CCCcHHHHHHHHHHHHHhcChHHHHH----------HHhCCCCcceecccceeEEEEecC-ChHHHHHH-HHHCCceeee
Q 013008 345 FAGSPLVCNAAIAVLDKISNPAFLAS----------KLARNPHVKDVRGLGLIIGIEFDV-SATPVVDA-CRDSGLLVLT 412 (451)
Q Consensus 345 ~~~~~~~~aaa~aal~~~~~~~~~~~----------~~~~~~~~~~v~g~G~~~~~~~~~-~~~~~~~~-l~~~Gv~~~~ 412 (451)
++.+++.++++.++|+.+..+...+. +++.+ ...+..+.|+++.+.. +..+++.. |.++||++.|
T Consensus 233 ~s~~~~~~~aa~~aL~~~~~~~~~~~l~~r~~~~~~~l~~~---~~~~~~~~f~~~~~~~~~~~~~~~~ll~~~gV~v~~ 309 (346)
T TIGR03576 233 LEAQAPLLAAVVRALEEFELSRIRDAFKRKEEVYLRLFDKL---NVERTPTGFVIKGVEEEKLIEIGLDLLRNYGIITIT 309 (346)
T ss_pred cCccHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhC---CCCcCCCeEEEEeCCCCCHHHHHHHHHHhCCEEEeC
Confidence 56788899999999986533222222 12222 1122234467777643 23344444 5568999998
Q ss_pred cC----CCCEEEEeCCCCCCHH---HHHHHHHHHHHHH
Q 013008 413 AG----KGNVVRLVPPLIISEQ---ELDQAVEILCKTL 443 (451)
Q Consensus 413 ~~----~~~~iri~~~~~~t~e---~i~~~l~~l~~~l 443 (451)
+. .++++||++. .+++ +++.++++|++.+
T Consensus 310 ~~~f~~~~~~vRis~~--~~~~~~~~~~~~~~al~~~~ 345 (346)
T TIGR03576 310 AVGMPGASKTLRFDLA--AKDAERIGDDYLVEAVKDSL 345 (346)
T ss_pred CcccCCCCCeEEEEEe--cChHHhcCHHHHHHHHHhcc
Confidence 53 1368888544 4444 7999999988754
No 144
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.92 E-value=4.4e-23 Score=208.36 Aligned_cols=332 Identities=14% Similarity=0.089 Sum_probs=213.7
Q ss_pred EEecCCCEEEeeccCccccc--CCCCCHHHHHHHHHHHhhcc-cccC--CCCCHHHHHHHHHHhhc----------cCCC
Q 013008 92 LYDAEGREYLDLSSGIAVNA--LGHGDADWIKAVVDQANVLT-HVSN--MYYSIPQIELAKRLVAC----------SFAD 156 (451)
Q Consensus 92 l~d~~G~~~iD~~~~~~~~~--lG~~~p~v~~a~~~~~~~~~-~~~~--~~~~~~~~~l~~~l~~~----------~~~e 156 (451)
+.+..|+.+|||..|..... + ..++.+.+++.+.+.... ..+. .+..+.+..+++++.+. ...+
T Consensus 27 ~~~~~~~~~i~l~~g~p~~~~~~-~p~~~~~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~~~~~~~~ 105 (412)
T PTZ00433 27 KPSPSPKSIIKLSVGDPTLDGNL-LTPAIQTKALVEAVDSQECNGYPPTVGSPEAREAVATYWRNSFVHKESLKSTIKKD 105 (412)
T ss_pred ccCCCCCCeeecCCcCCCCcCCC-CCCHHHHHHHHHHhhcCCCCCCCCCCCcHHHHHHHHHHHHhhccccccccCCCChh
Confidence 34567889999999876421 2 257889999988776421 1111 12233355666666543 2367
Q ss_pred eEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHH
Q 013008 157 RVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIE 236 (451)
Q Consensus 157 ~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 236 (451)
++++|+|+++|+..++++.. .+++.|++.+|+|+.+.......+.... . .+..++..+ --|++
T Consensus 106 ~i~it~G~~~al~~~~~~~~-----------~~gd~vlv~~P~y~~~~~~~~~~g~~~~-~---i~~~~~~~~--~~d~~ 168 (412)
T PTZ00433 106 NVVLCSGVSHAILMALTALC-----------DEGDNILVPAPGFPHYETVCKAYGIEMR-F---YNCRPEKDW--EADLD 168 (412)
T ss_pred hEEEeCChHHHHHHHHHHhc-----------CCCCEEEEccCCcccHHHHHHHcCCEEE-E---EecCccccC--cCCHH
Confidence 99999999999999999665 2689999999999887654433322111 0 111111000 02788
Q ss_pred HHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccc-cccccC-C--Ccceee
Q 013008 237 ATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLW-AHEHYG-I--FPDIMT 312 (451)
Q Consensus 237 ~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~-~~~~~~-~--~pdi~t 312 (451)
+|++.+.++ +++|++...++++| ...+.+.+++|.++|++||++||+||+|.+|-+.+..+ ....+. - ..-+.+
T Consensus 169 ~l~~~~~~~-~~~i~~~~p~NPtG-~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S 246 (412)
T PTZ00433 169 EIRRLVDDR-TKALIMTNPSNPCG-SNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNGATFTSVADFDTTVPRVILGG 246 (412)
T ss_pred HHHHHhccC-ceEEEEeCCCCCCC-cccCHHHHHHHHHHHHHcCCeEEEeccccccccCCCCccchhhccCCCceEEEcc
Confidence 999888653 44444433344455 46789999999999999999999999998874443211 111111 1 112337
Q ss_pred eccccc-CCcccccccc------cHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH--------------H
Q 013008 313 LAKPLA-GGLPIGAALV------TEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS--------------K 371 (451)
Q Consensus 313 ~sK~lg-~G~~iG~v~~------~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~--------------~ 371 (451)
|||.++ .|+|+||+++ .+++++.+.... ..+++.+++++.++.++|+.- .+.++++ .
T Consensus 247 fSK~~~~pGlRlG~~i~~~p~~~~~~~~~~~~~~~-~~~~~~~~~~q~a~~~~l~~~-~~~~~~~~~~~~~~~r~~l~~~ 324 (412)
T PTZ00433 247 TAKNLVVPGWRLGWLLLVDPHGNGGDFLDGMKRLG-MLVCGPCSVVQAALGEALLNT-PQEHLEQIVAKLEEGAMVLYNH 324 (412)
T ss_pred chhhcCCCCeeEEEEEEeCCcccHHHHHHHHHHHh-hccCCCChHHHHHHHHHHhcC-cHHHHHHHHHHHHHHHHHHHHH
Confidence 999996 6999999986 245666664321 224567889998888877631 1233322 2
Q ss_pred HhCCCCcceecc-cceeEEEEecC-------ChHHHHHHHHH-CCceeeecCC---CCEEEEeCCCCCCHHHHHHHHHHH
Q 013008 372 LARNPHVKDVRG-LGLIIGIEFDV-------SATPVVDACRD-SGLLVLTAGK---GNVVRLVPPLIISEQELDQAVEIL 439 (451)
Q Consensus 372 ~~~~~~~~~v~g-~G~~~~~~~~~-------~~~~~~~~l~~-~Gv~~~~~~~---~~~iri~~~~~~t~e~i~~~l~~l 439 (451)
++.+..+..+.+ .|+++|+.++. +..++++.|++ +||.+.|+.. .+++|+++. ..++++++++++|
T Consensus 325 L~~~~~~~~~~p~gg~f~~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRis~~--~~~e~l~~al~~l 402 (412)
T PTZ00433 325 IGECIGLSPTMPRGSMFLMSRLDLEKFRDIKSDVEFYEKLLEEENVQVLPGEIFHMPGFTRLTIS--RPVEVLREAVERI 402 (412)
T ss_pred HhcCCCCcccCCCeeEEEEEEechhhcCCCCCHHHHHHHHHHhcCEEEeCccccCCCCeEEEEec--CCHHHHHHHHHHH
Confidence 233323333334 47788887742 45789999984 7999998642 367888654 4689999999999
Q ss_pred HHHHHHHh
Q 013008 440 CKTLPVLD 447 (451)
Q Consensus 440 ~~~l~~~~ 447 (451)
.+++++.+
T Consensus 403 ~~~~~~~~ 410 (412)
T PTZ00433 403 KAFCERHK 410 (412)
T ss_pred HHHHHHhc
Confidence 99987654
No 145
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.92 E-value=3.7e-23 Score=207.27 Aligned_cols=318 Identities=14% Similarity=0.129 Sum_probs=203.5
Q ss_pred CCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcc-cccC--CCCCHHHHHHHHHHhhccC----CC-eEEecCCHHHHH
Q 013008 97 GREYLDLSSGIAVNALGHGDADWIKAVVDQANVLT-HVSN--MYYSIPQIELAKRLVACSF----AD-RVFFSNTGTEAN 168 (451)
Q Consensus 97 G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~-~~~~--~~~~~~~~~l~~~l~~~~~----~e-~v~~~~sG~eA~ 168 (451)
|.+++|+..|.. .++ .+|.+.+++.+.+.... ..+. .+..+.+..+++++.+.++ .+ .|++|+|+++|+
T Consensus 30 ~~~~i~l~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~ii~t~G~~~~i 106 (385)
T PRK09276 30 GVDVISLGIGDP--DLP-TPDHIIEAMCKAVEDPENHQYPSYEGMLEFRKAVADWYKRRFGVELDPETEVISLIGSKEGI 106 (385)
T ss_pred CCCEEEecCCCC--CCC-CCHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHH
Confidence 456788888865 233 56789999988876421 1111 1122335666666655433 44 588999999999
Q ss_pred HHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeE
Q 013008 169 EAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTA 248 (451)
Q Consensus 169 ~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a 248 (451)
..++++.. +++|.|++.+|+|.++...+...+. .... .+...+..+. .|++++++.+.. +++
T Consensus 107 ~~~~~~~~-----------~~gd~Vl~~~P~y~~~~~~~~~~g~-~~~~---v~~~~~~g~~--~d~~~l~~~~~~-~~~ 168 (385)
T PRK09276 107 AHIPLAFV-----------NPGDVVLVPDPGYPVYKIGTIFAGG-EPYF---MPLKEENGFL--PDLDAIPEDVAK-KAK 168 (385)
T ss_pred HHHHHHhC-----------CCCCEEEEcCCCCcChHHHHHHcCC-EEEE---EecCCCCCCc--CCHHHHHHhccc-cce
Confidence 99988654 2689999999999887654433222 1111 1111110010 278888888764 455
Q ss_pred EEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccc-c-ccc---cCCCcceeeeccccc-CCcc
Q 013008 249 AVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLW-A-HEH---YGIFPDIMTLAKPLA-GGLP 322 (451)
Q Consensus 249 avi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~-~-~~~---~~~~pdi~t~sK~lg-~G~~ 322 (451)
+|++.+.++++|. .++.+.+++|.++|++||+++|+||+|..|...+... . ... .+....+.+|||.+| .|+|
T Consensus 169 ~v~l~~p~NPtG~-~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlR 247 (385)
T PRK09276 169 LMFINYPNNPTGA-VADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFLEVPGAKDVGIEFHSLSKTYNMTGWR 247 (385)
T ss_pred EEEEeCCCCCCCC-CCCHHHHHHHHHHHHHCCcEEEEecchhheecCCCCCCChhccCCCcCCEEEEecchhhcCCcchh
Confidence 5655543455554 6799999999999999999999999998764333211 1 111 123345568999997 6999
Q ss_pred cccccccHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH--------------HHhCCCCcceecc-ccee
Q 013008 323 IGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS--------------KLARNPHVKDVRG-LGLI 387 (451)
Q Consensus 323 iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~--------------~~~~~~~~~~v~g-~G~~ 387 (451)
+||+++++++++.+.........+.+++.+.++.++|+. .+.++++ .++.+. +....+ .|++
T Consensus 248 iG~~i~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~~~~ 324 (385)
T PRK09276 248 IGFAVGNADLIAGLGKVKSNVDSGVFQAIQEAGIAALNG--PQEVVEELRKIYQERRDILVEGLRKLG-LEVEPPKATFY 324 (385)
T ss_pred heeeeCCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHcC--cHHHHHHHHHHHHHHHHHHHHHHHhCC-CcccCCCcceE
Confidence 999999999998876432223334566777777777752 2233222 222332 222333 3566
Q ss_pred EEEEec--CChHHHHHHHH-HCCceeeecCC-----CCEEEEeCCCCCCHHHHHHHHHHHHH
Q 013008 388 IGIEFD--VSATPVVDACR-DSGLLVLTAGK-----GNVVRLVPPLIISEQELDQAVEILCK 441 (451)
Q Consensus 388 ~~~~~~--~~~~~~~~~l~-~~Gv~~~~~~~-----~~~iri~~~~~~t~e~i~~~l~~l~~ 441 (451)
+++.+. .+..++++.|+ ++||.+.|+.. .+++|++++ .+++++.+++++|.+
T Consensus 325 ~~v~~~~~~~~~~l~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~--~~~~~l~~~l~~l~~ 384 (385)
T PRK09276 325 VWAPVPKGYTSAEFATLLLDKAGVVVTPGNGFGEYGEGYFRIALT--VPDERIEEAVERIKK 384 (385)
T ss_pred EEEECCCCCCHHHHHHHHHHhCCEEECCchhhCCCCCCeEEEEeC--CCHHHHHHHHHHHhh
Confidence 788774 35678888887 47999998631 257888654 578889888888764
No 146
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.92 E-value=7.3e-23 Score=205.27 Aligned_cols=322 Identities=14% Similarity=0.136 Sum_probs=211.7
Q ss_pred EEEeeccCcccccCCCCCHHHHHHHHHHHhhccc---ccCCCCCHHHHHHHHHHhhccC-----CCeEEecCCHHHHHHH
Q 013008 99 EYLDLSSGIAVNALGHGDADWIKAVVDQANVLTH---VSNMYYSIPQIELAKRLVACSF-----ADRVFFSNTGTEANEA 170 (451)
Q Consensus 99 ~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~---~~~~~~~~~~~~l~~~l~~~~~-----~e~v~~~~sG~eA~~~ 170 (451)
.++|+..|... +. .++.+.+|+.+.+..... ....+..+.+.++++++++.++ .+.+++++|+++|+..
T Consensus 28 ~~~~l~~g~~~--~~-~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~~~~~~l~~~~g~~~~~~~~i~~t~G~~~~l~~ 104 (389)
T PRK05957 28 GTISLGQGVVS--YP-PPPEAIEALNNFLANPENHKYQAVQGIPPLLEAITQKLQQDNGIELNNEQAIVVTAGSNMAFMN 104 (389)
T ss_pred CeEEccCCCCC--CC-CCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCChHHHHHH
Confidence 35777777653 33 567889999887654321 1112223447788888887765 3579999999999988
Q ss_pred HHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEE
Q 013008 171 AIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAV 250 (451)
Q Consensus 171 al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aav 250 (451)
+++.+. .++|.|++.+|+|..+...... .|.... +.+...+.. -|++++++.+++ ++++|
T Consensus 105 ~~~~~~-----------~~gd~Vlv~~P~y~~~~~~~~~-~g~~~~---~v~~~~~~~----~d~~~l~~~i~~-~~klv 164 (389)
T PRK05957 105 AILAIT-----------DPGDEIILNTPYYFNHEMAITM-AGCQPI---LVPTDDNYQ----LQPEAIEQAITP-KTRAI 164 (389)
T ss_pred HHHHhc-----------CCCCEEEEeCCCCcCHHHHHHh-cCCEEE---EeecCCCCC----cCHHHHHHhcCc-CceEE
Confidence 887654 1688999999999776433222 121110 011111111 278999999875 45555
Q ss_pred EEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCccccc-cc-ccccC---CCcceeeeccccc-CCcccc
Q 013008 251 FVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYL-WA-HEHYG---IFPDIMTLAKPLA-GGLPIG 324 (451)
Q Consensus 251 i~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~-~~-~~~~~---~~pdi~t~sK~lg-~G~~iG 324 (451)
++...++++|. ..+.+.+++|.++|++||+++|+||+|.+|...+.. .. ....+ ....+.+|||.+| .|+|+|
T Consensus 165 ~~~~p~NPtG~-~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG 243 (389)
T PRK05957 165 VTISPNNPTGV-VYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYGFASWRIG 243 (389)
T ss_pred EEeCCCCCCCc-CcCHHHHHHHHHHHHHcCcEEEEeccchhccCCCCCccChhhCCCccCcEEEEecchhhccCccceeE
Confidence 55544555554 578999999999999999999999999877443321 11 11112 2233558999998 699999
Q ss_pred cccccHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH--------------HHhCCCCc-ceeccc-ceeE
Q 013008 325 AALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS--------------KLARNPHV-KDVRGL-GLII 388 (451)
Q Consensus 325 ~v~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~--------------~~~~~~~~-~~v~g~-G~~~ 388 (451)
|+++++++++.+.........+.+.+++.++..+|+. ..+++++ .++.++.+ ....+. |+++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~gg~~~ 321 (389)
T PRK05957 244 YMVIPIHLLEAIKKIQDTILICPPVVSQYAALGALQV--GKSYCQQHLPEIAQVRQILLKSLGQLQDRCTLHPANGAFYC 321 (389)
T ss_pred EEecCHHHHHHHHHHHhhcccCCCcHHHHHHHHHHhC--ChHHHHHHHHHHHHHHHHHHHHHHhcCCCccccCCCeeEEE
Confidence 9999999999886543333445567788888777752 1223222 22333322 222233 6778
Q ss_pred EEEec--CChHHHHHHHH-HCCceeeecCC-----CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHh
Q 013008 389 GIEFD--VSATPVVDACR-DSGLLVLTAGK-----GNVVRLVPPLIISEQELDQAVEILCKTLPVLD 447 (451)
Q Consensus 389 ~~~~~--~~~~~~~~~l~-~~Gv~~~~~~~-----~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~~ 447 (451)
|+.+. .+..++++.|+ ++||.+.|+.. ++++|++... .+++++++++++|.+.++++-
T Consensus 322 ~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~-~~~~~l~~~~~~l~~~~~~~~ 387 (389)
T PRK05957 322 FLKVNTDLNDFELVKQLIREYRVAVIPGTTFGMKNGCYLRIAYGA-LQKATAKEGIERLVQGLKTIV 387 (389)
T ss_pred EEeCCCCCChHHHHHHHHHHCCEEEccchhhCCCCCCEEEEEEec-CCHHHHHHHHHHHHHHHHhhh
Confidence 88873 45678999987 58999998631 2578987643 479999999999999987754
No 147
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.92 E-value=2.9e-23 Score=208.42 Aligned_cols=323 Identities=16% Similarity=0.118 Sum_probs=207.4
Q ss_pred EEEeeccCcccccCCCCCHHHHHHHHHHHhhccccc--CCCCCHHHHHHHHHHhhccC----CCeEEecCCHHHHHHHHH
Q 013008 99 EYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVS--NMYYSIPQIELAKRLVACSF----ADRVFFSNTGTEANEAAI 172 (451)
Q Consensus 99 ~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~--~~~~~~~~~~l~~~l~~~~~----~e~v~~~~sG~eA~~~al 172 (451)
.++||..+.. .++ .++.+.+++.+.+......+ ..+....+.++++++.+.++ .+++++|+|+++|+..++
T Consensus 34 ~~i~l~~~~~--~~~-~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~ 110 (391)
T PRK08361 34 NVISLGIGEP--DFD-TPKNIKEAAKRALDEGWTHYTPNAGIPELREAIAEYYKKFYGVDVDVDNVIVTAGAYEATYLAF 110 (391)
T ss_pred CeEEcCCCCC--CCC-CCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcccEEEeCChHHHHHHHH
Confidence 5688887765 344 36888899888776422111 11122234555555544333 679999999999999998
Q ss_pred HHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEE
Q 013008 173 KFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFV 252 (451)
Q Consensus 173 ~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ 252 (451)
+.+. .+++.|++.+|+|.++...+. ..+..... .+..++..+ ..|++++++.+.++ +++|++
T Consensus 111 ~~l~-----------~~g~~Vlv~~p~y~~~~~~~~-~~g~~~~~---v~~~~~~~~--~~d~~~l~~~i~~~-~~~v~i 172 (391)
T PRK08361 111 ESLL-----------EEGDEVIIPDPAFVCYVEDAK-IAEAKPIR---IPLREENEF--QPDPDELLELITKR-TRMIVI 172 (391)
T ss_pred HHhc-----------CCCCEEEEcCCCCcccHHHHH-HcCCEEEE---EecCCccCC--CCCHHHHHHhcccc-cEEEEE
Confidence 8654 168899999999988754332 22221111 111111000 03789999988754 445554
Q ss_pred ccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccc-ccccccc--CCCcceeeeccccc-CCcccccccc
Q 013008 253 EPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGY-LWAHEHY--GIFPDIMTLAKPLA-GGLPIGAALV 328 (451)
Q Consensus 253 ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~-~~~~~~~--~~~pdi~t~sK~lg-~G~~iG~v~~ 328 (451)
...++++|. ..+.+.+++|.++|+++++++|+||+|..|...+. ....... ....-+.+|||.++ .|+|+||+++
T Consensus 173 ~~p~NPtG~-~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~GlRiG~~~~ 251 (391)
T PRK08361 173 NYPNNPTGA-TLDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGAKHYPMIKYAPDNTILANSFSKTFAMTGWRLGFVIA 251 (391)
T ss_pred eCCCCCCCc-CcCHHHHHHHHHHHHHcCeEEEEEcccccceeCCCCCCCHhhcCCCCEEEEecCchhcCCcHhhhhhhcc
Confidence 433455554 56889999999999999999999999987643332 1111111 11122347899998 7999999999
Q ss_pred cHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH--------------HHhCCCCcceeccc-ceeEEEEec
Q 013008 329 TEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS--------------KLARNPHVKDVRGL-GLIIGIEFD 393 (451)
Q Consensus 329 ~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~--------------~~~~~~~~~~v~g~-G~~~~~~~~ 393 (451)
++++++.+.......+++.+.+.+.++.++|+.-...+++++ .++.++.+....+. |+++|+.+.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~p~g~~~~~~~l~ 331 (391)
T PRK08361 252 PEQVIKDMIKLHAYIIGNVASFVQIAGIEALRSKESWKAVEEMRKEYNERRKLVLKRLKEMPHIKVFEPKGAFYVFANID 331 (391)
T ss_pred CHHHHHHHHHHHhhhccCCChHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHhCCCCeecCCCEEEEEEEECC
Confidence 999888765332233456678888888887753211112211 23444444434444 567777774
Q ss_pred ---CChHHHHHHHHH-CCceeeecCC-----CCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 013008 394 ---VSATPVVDACRD-SGLLVLTAGK-----GNVVRLVPPLIISEQELDQAVEILCKTLPV 445 (451)
Q Consensus 394 ---~~~~~~~~~l~~-~Gv~~~~~~~-----~~~iri~~~~~~t~e~i~~~l~~l~~~l~~ 445 (451)
.+..++++.|++ +||.+.|+.. .+++|++.. .+++++++++++|.+++++
T Consensus 332 ~~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~--~~~~~l~~al~~l~~~l~~ 390 (391)
T PRK08361 332 ETGMSSEDFAEWLLEKARVVVIPGTAFGKAGEGYIRISYA--TSKEKLIEAMERMEKALEE 390 (391)
T ss_pred CCCCCHHHHHHHHHHhCCEEEcCchhhCCCCCCEEEEEec--CCHHHHHHHHHHHHHHHhc
Confidence 357788888875 7999988631 257888654 5788999999999998864
No 148
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.92 E-value=3.9e-23 Score=205.55 Aligned_cols=306 Identities=15% Similarity=0.080 Sum_probs=199.6
Q ss_pred CCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHhhccC-----CCeEEecCCHHHHHHH
Q 013008 96 EGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSF-----ADRVFFSNTGTEANEA 170 (451)
Q Consensus 96 ~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-----~e~v~~~~sG~eA~~~ 170 (451)
++..++||..+.. ....+|.+.+++.+......+....+....+..+++++.+..+ .++|++|+|+++|+..
T Consensus 25 ~~~~~i~l~~~~p---~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~~I~it~G~~~~i~~ 101 (364)
T PRK07865 25 HPDGIVDLSVGTP---VDPVPPVIQEALAAAADAPGYPTTAGTPELREAIVGWLARRRGVTGLDPAAVLPVIGSKELVAW 101 (364)
T ss_pred cCCCEEEcCCCCC---CCCCCHHHHHHHHHHHhhCCCCCccCCHHHHHHHHHHHHHHcCCCCCCcccEEEccChHHHHHH
Confidence 3446788888754 2334688888887765432222122223446777777766532 6799999999999988
Q ss_pred HHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEE
Q 013008 171 AIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAV 250 (451)
Q Consensus 171 al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aav 250 (451)
++.++. . .+++.|++.+|+|.++.......+ ...+.++++++++. .++++|
T Consensus 102 ~~~~l~--~--------~~gd~Vl~~~p~y~~~~~~~~~~g---------------~~~~~~~~~~~l~~----~~~~~v 152 (364)
T PRK07865 102 LPTLLG--L--------GPGDVVVIPELAYPTYEVGARLAG---------------ATVVRADSLTELGP----QRPALI 152 (364)
T ss_pred HHHHHc--C--------CCCCEEEECCCCcccHHHHHHhcC---------------CEEEecCChhhCCc----ccceEE
Confidence 776541 1 168999999999987754332221 11222234444332 356677
Q ss_pred EEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCccccccc-ccc------cCCCcceeeeccccc-CCcc
Q 013008 251 FVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWA-HEH------YGIFPDIMTLAKPLA-GGLP 322 (451)
Q Consensus 251 i~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~-~~~------~~~~pdi~t~sK~lg-~G~~ 322 (451)
++++.++++|. +.+.+.+++|.++|++||+++|+||+|.++...+.... ... .+...-+.+|||.++ .|+|
T Consensus 153 ~~~~p~NPtG~-~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR 231 (364)
T PRK07865 153 WLNSPSNPTGR-VLGVDHLRKVVAWARERGAVVASDECYLELGWDAEPVSILDPRVCGGDHTGLLAVHSLSKQSNLAGYR 231 (364)
T ss_pred EEcCCCCCCCc-cCCHHHHHHHHHHHHHcCCEEEEecchhhhccCCCCCccccccccCCccceEEEEeechhccCCCcee
Confidence 77655556664 56899999999999999999999999987754443211 111 011122347999996 6999
Q ss_pred cccccccHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH--------------HHhCCCCcceecc-ccee
Q 013008 323 IGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS--------------KLARNPHVKDVRG-LGLI 387 (451)
Q Consensus 323 iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~--------------~~~~~~~~~~v~g-~G~~ 387 (451)
+||+++++++++.+........++.+++.+.++.++|+. +++.++ .++.+. +....+ .|++
T Consensus 232 iG~i~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~---~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~ 307 (364)
T PRK07865 232 AGFVAGDPALVAELLEVRKHAGMMVPAPVQAAMVAALGD---DAHVREQRERYARRRAVLRPALEAAG-FRVDHSEAGLY 307 (364)
T ss_pred eEEEecCHHHHHHHHHHHHhcCCCcCHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHHHHHHHcC-CcccCCCccEE
Confidence 999999999988876433334566788888888777752 222221 222232 222223 3567
Q ss_pred EEEEecCChHHHHHHHHHCCceeeecC-----CCCEEEEeCCCCCCHHHHHHHHHHHH
Q 013008 388 IGIEFDVSATPVVDACRDSGLLVLTAG-----KGNVVRLVPPLIISEQELDQAVEILC 440 (451)
Q Consensus 388 ~~~~~~~~~~~~~~~l~~~Gv~~~~~~-----~~~~iri~~~~~~t~e~i~~~l~~l~ 440 (451)
+|+.+......+.+.|.++||++.|+. ..+++|++++ .++|++++++++|.
T Consensus 308 ~~~~~~~~~~~~~~~l~~~gv~v~pg~~f~~~~~~~iRi~~~--~~~~~~~~~~~~l~ 363 (364)
T PRK07865 308 LWATRGEDCWDTVAWLAERGILVAPGDFYGPAGAQHVRVALT--ATDERIAAAVERLA 363 (364)
T ss_pred EEEeCCCCHHHHHHHHHHCCEEEeCccccCcCCCCEEEEEec--CCHHHHHHHHHHhh
Confidence 777765556778889999999998853 1357888655 47899999999885
No 149
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.92 E-value=2.4e-23 Score=209.68 Aligned_cols=326 Identities=13% Similarity=0.123 Sum_probs=205.6
Q ss_pred CCEEEeeccCcccc--cCCCCCHHHHHHHHHHHhhccc-cc--CCCCCHHHHHHHHHHhhc---cCCCeEEecCCHHHHH
Q 013008 97 GREYLDLSSGIAVN--ALGHGDADWIKAVVDQANVLTH-VS--NMYYSIPQIELAKRLVAC---SFADRVFFSNTGTEAN 168 (451)
Q Consensus 97 G~~~iD~~~~~~~~--~lG~~~p~v~~a~~~~~~~~~~-~~--~~~~~~~~~~l~~~l~~~---~~~e~v~~~~sG~eA~ 168 (451)
|+.+++|..|.+.. .++ .++.+.+++.+.+..... .+ ..+..+.+.++++.+.+. ...++|++++|+++|+
T Consensus 30 ~~~~i~l~~g~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~~~~~~~~~i~~t~G~~~al 108 (401)
T TIGR01264 30 EKPMIKLSIGDPTVFGNLP-TDPEVMQAMKDSLDSGKYNGYAPTVGALSAREAIASYYHNPDGPIEADDVVLCSGCSHAI 108 (401)
T ss_pred CCCeeecCCCCCCCcCCCC-CCHHHHHHHHHHHhccCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCHHHEEECcChHHHH
Confidence 46788888877632 233 578899999887765211 11 111122244455444432 1267899999999999
Q ss_pred HHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeE
Q 013008 169 EAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTA 248 (451)
Q Consensus 169 ~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a 248 (451)
..+++++. .+++.|++.+|+|..+.......+. .... .+...+..+ --|++.+++.+..+ ++
T Consensus 109 ~~~~~~l~-----------~~gd~v~i~~P~y~~~~~~~~~~g~-~v~~---~~~~~~~~~--~~d~~~l~~~~~~~-~~ 170 (401)
T TIGR01264 109 EMCIAALA-----------NAGQNILVPRPGFPLYETLAESMGI-EVKL---YNLLPDKSW--EIDLKQLESLIDEK-TA 170 (401)
T ss_pred HHHHHHhC-----------CCCCEEEEeCCCChhHHHHHHHcCC-EEEE---eecCCccCC--CCCHHHHHHHhccC-ce
Confidence 99998665 1588999999999877544332221 1100 011110000 02789999888653 44
Q ss_pred EEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccc-ccccc-CC--Ccceeeeccccc-CCccc
Q 013008 249 AVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLW-AHEHY-GI--FPDIMTLAKPLA-GGLPI 323 (451)
Q Consensus 249 avi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~-~~~~~-~~--~pdi~t~sK~lg-~G~~i 323 (451)
+|++...++++|. ..+.+.+++|.++|+++|+++|+||+|.+|-+.+..+ ....+ .- ..-+.+|||.++ .|+|+
T Consensus 171 ~v~~~~p~NPtG~-~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRi 249 (401)
T TIGR01264 171 ALIVNNPSNPCGS-VFSRQHLEEILAVAERQCLPIIADEIYGDMVFSGATFEPLASLSSTVPILSCGGLAKRWLVPGWRL 249 (401)
T ss_pred EEEEcCCCCCCCC-CCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCcccccHHHcCCCCcEEEEccCcccCCCccceE
Confidence 4444333445554 5789999999999999999999999998875444311 11111 10 122347999976 69999
Q ss_pred ccccccH------HHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH--------------HHhCCCCcce-ec
Q 013008 324 GAALVTE------KVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS--------------KLARNPHVKD-VR 382 (451)
Q Consensus 324 G~v~~~~------~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~--------------~~~~~~~~~~-v~ 382 (451)
||+++++ ++++.+.... ...++.+++++.++.++|+. ..++++++ .++.++.+.. .+
T Consensus 250 G~iv~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~a~~~~l~~-~~~~~l~~~~~~~~~~r~~l~~~L~~~~~~~~~~p 327 (401)
T TIGR01264 250 GWIIIHDRRGILRDIRDGLVKLS-QRILGPCTIVQGALPSILLR-TPQEYFDGTLSVLESNAMLCYGALAAVPGLRPVMP 327 (401)
T ss_pred EEEEecCcchhHHHHHHHHHHHh-hccCCCCcHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCC
Confidence 9999863 3444433211 12455678888888888863 12333322 2344443332 34
Q ss_pred ccceeEEEEecC-------ChHHHHHHHH-HCCceeeecC---CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 013008 383 GLGLIIGIEFDV-------SATPVVDACR-DSGLLVLTAG---KGNVVRLVPPLIISEQELDQAVEILCKTLPVL 446 (451)
Q Consensus 383 g~G~~~~~~~~~-------~~~~~~~~l~-~~Gv~~~~~~---~~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~ 446 (451)
..|+++|+.+.. ...++++.|+ ++||++.|+. ..+++|++.. .+++++++++++|.++++++
T Consensus 328 ~~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gI~v~pg~~f~~~~~iRis~~--~~~~~l~~~l~rl~~~~~~~ 400 (401)
T TIGR01264 328 SGAMYMMVGIEMEHFPEFKNDVEFTERLVAEQSVFCLPGSCFEYPGFFRVVLT--VPVVMMEEACSRIQEFCERH 400 (401)
T ss_pred CeeeEEEEEecccccCCCCCHHHHHHHHHHhCCEEEeCchhcCCCCeEEEEEc--CCHHHHHHHHHHHHHHHhcc
Confidence 568899988731 3567888886 6899999864 2467888654 57899999999999988753
No 150
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.92 E-value=4e-23 Score=204.70 Aligned_cols=312 Identities=16% Similarity=0.183 Sum_probs=204.4
Q ss_pred CCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHhhccC--CCeEEecCCHHHHHHHHHH
Q 013008 96 EGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSF--ADRVFFSNTGTEANEAAIK 173 (451)
Q Consensus 96 ~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~e~v~~~~sG~eA~~~al~ 173 (451)
++++++||..|.. ++| .+|.+.+|+.+.+..... ++.....+|.+.++++++ .++|++++|+++++..+++
T Consensus 18 ~~~~~i~l~~~~~--~~~-~p~~~~~a~~~~~~~~~~----y~~~~~~~lr~~ia~~~~~~~~~i~it~Ga~~~l~~~~~ 90 (356)
T PRK08056 18 SPDQLLDFSANIN--PLG-MPVSLKRAIIDNLDCAER----YPDVEYRHLHQALARHHQVPASWILAGNGETESIFAVVS 90 (356)
T ss_pred ChhhEEEeccccC--CCC-CCHHHHHHHHHHHHhccc----CcCccHHHHHHHHHHHhCcChhhEEECCCHHHHHHHHHH
Confidence 4678899988644 566 678899999887765322 233336788888888876 7899999999999999888
Q ss_pred HHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEc
Q 013008 174 FARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVE 253 (451)
Q Consensus 174 ~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~e 253 (451)
++. ++ ++++.+|+|..+....... |..... .+..++..+. .| +++++.+.+ ++++|++.
T Consensus 91 ~l~------------~g-~viv~~P~y~~~~~~~~~~-g~~~~~---v~~~~~~~~~--~~-~~~~~~~~~-~~k~v~l~ 149 (356)
T PRK08056 91 GLK------------PR-RAMIVTPGFAEYRRALQQV-GCEIRR---YSLREADGWQ--LT-DAILEALTP-DLDCLFLC 149 (356)
T ss_pred HhC------------CC-CEEEeCCCcHHHHHHHHHc-CCeEEE---EecccccCCC--cc-HHHHHhccC-CCCEEEEe
Confidence 542 34 4788899997765433222 221111 1111110010 13 344455543 45555554
Q ss_pred cccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccc--cccccCCCcceeeeccccc-CCcccccccc-c
Q 013008 254 PIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLW--AHEHYGIFPDIMTLAKPLA-GGLPIGAALV-T 329 (451)
Q Consensus 254 p~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~--~~~~~~~~pdi~t~sK~lg-~G~~iG~v~~-~ 329 (451)
..++++|. ..+.+.+++|.++|++||+++|+||+|.+|...+... ....++...-+.+|||.++ .|+|+||+++ +
T Consensus 150 ~p~NPTG~-~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~ 228 (356)
T PRK08056 150 TPNNPTGL-LPERQLLQAIAERCKSLNIALILDEAFIDFIPDETGFIPQLADNPHLWVLRSLTKFYAIPGLRLGYLVNSD 228 (356)
T ss_pred CCcCCCCC-CCCHHHHHHHHHHHHhcCCEEEEecchhccCCcchHHHHHhccCCCEEEEEechhhccCcchhheeeecCC
Confidence 34444554 6799999999999999999999999998874433211 1111222223447999999 7999999998 4
Q ss_pred HHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH--------------HHhCCCCcceecccceeEEEEecCC
Q 013008 330 EKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS--------------KLARNPHVKDVRGLGLIIGIEFDVS 395 (451)
Q Consensus 330 ~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~--------------~~~~~~~~~~v~g~G~~~~~~~~~~ 395 (451)
+++++.+... ...++.+.+++.++.++++ .+.+.++ .++.++.+...++.|.++|+.+...
T Consensus 229 ~~~~~~l~~~--~~~~~~~~~~~~~a~~~l~---~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~ 303 (356)
T PRK08056 229 DAAVARMRRQ--QMPWSINAFAALAGEVILQ---DRAYQQATWQWLAEEGARFYQALCALPLLTVWPGRANYLFLRCERP 303 (356)
T ss_pred HHHHHHHHHh--CCCCchhHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcCCCCcEEEEEcCCC
Confidence 6777776532 2346667788888777774 2222211 2344444433456688888887545
Q ss_pred hHHHHHHHHHCCceeeecCC-----CCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q 013008 396 ATPVVDACRDSGLLVLTAGK-----GNVVRLVPPLIISEQELDQAVEILCKTLP 444 (451)
Q Consensus 396 ~~~~~~~l~~~Gv~~~~~~~-----~~~iri~~~~~~t~e~i~~~l~~l~~~l~ 444 (451)
..++++.|+++||.+.++.. ++++||++. +.++.+.+++.|+++++
T Consensus 304 ~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRis~~---~~~~~~~l~~~l~~~~~ 354 (356)
T PRK08056 304 DIDLQRALLTQRILIRSCANYPGLDSRYYRVAIR---SAAENERLLAALRNVLT 354 (356)
T ss_pred hHHHHHHHHHCCeEEEECCCCCCCCCCEEEEEEc---CHHHHHHHHHHHHHHHc
Confidence 67899999999999987632 257899744 77889999998887653
No 151
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.92 E-value=7.6e-23 Score=202.49 Aligned_cols=308 Identities=19% Similarity=0.226 Sum_probs=203.8
Q ss_pred CEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHhhccC--CCeEEecCCHHHHHHHHHHHH
Q 013008 98 REYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSF--ADRVFFSNTGTEANEAAIKFA 175 (451)
Q Consensus 98 ~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~e~v~~~~sG~eA~~~al~~a 175 (451)
.+++||..+.. .+| .+|.+.+++.+.+..... ++.....+|.++++++++ .++|++++|+++++..+++++
T Consensus 19 ~~~~~l~~~~~--~~~-~p~~~~~a~~~~~~~~~~----Y~~~~~~~lr~~ia~~~~~~~~~i~it~Ga~~~l~~~~~~~ 91 (354)
T PRK06358 19 NMILDFSANIN--PLG-VPESLKQAITENLDKLVE----YPDPDYLELRKRIASFEQLDLENVILGNGATELIFNIVKVT 91 (354)
T ss_pred cceEEecCCCC--CCC-CCHHHHHHHHHHHHhhhc----CCCccHHHHHHHHHHHhCCChhhEEECCCHHHHHHHHHHHh
Confidence 45789987654 455 378899999987755322 233235678888888775 789999999999999988853
Q ss_pred HHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEccc
Q 013008 176 RKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPI 255 (451)
Q Consensus 176 ~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~ 255 (451)
. ++.|++.+|+|+.+.......+. .... .+......+ . -| +++.+.+..+...++++.|.
T Consensus 92 ~-------------~~~v~i~~P~y~~~~~~~~~~g~-~~~~---~~~~~~~~~-~-~d-~~~~~~~~~~~~~v~~~~P~ 151 (354)
T PRK06358 92 K-------------PKKVLILAPTFAEYERALKAFDA-EIEY---AELTEETNF-A-AN-EIVLEEIKEEIDLVFLCNPN 151 (354)
T ss_pred C-------------CCcEEEecCChHHHHHHHHHcCC-eeEE---EeCccccCC-C-cc-HHHHHhhccCCCEEEEeCCC
Confidence 2 35799999999887654432221 1111 111110000 0 14 34444444333334566774
Q ss_pred cCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccc-cccccCCCcc---eeeeccccc-CCccccccccc-
Q 013008 256 QGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLW-AHEHYGIFPD---IMTLAKPLA-GGLPIGAALVT- 329 (451)
Q Consensus 256 ~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~-~~~~~~~~pd---i~t~sK~lg-~G~~iG~v~~~- 329 (451)
+++| ..++.+.+++|.++|++||+++|+||+|..|-..+... ........+. +.+|||.++ .|+|+||++++
T Consensus 152 -NPtG-~~~~~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RiG~lv~~~ 229 (354)
T PRK06358 152 -NPTG-QLISKEEMKKILDKCEKRNIYLIIDEAFMDFLEENETISMINYLENFKNLIIIRAFTKFFAIPGLRLGYGLTSN 229 (354)
T ss_pred -CCCC-CccCHHHHHHHHHHHHhcCCEEEEeCcccccCCCccchhHHHhccCCCCEEEEEechhhccCcchhheeeecCC
Confidence 4444 46799999999999999999999999998875443211 1111121222 448999999 79999999874
Q ss_pred HHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH--------------HHhCCCCcceecccceeEEEEecCC
Q 013008 330 EKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS--------------KLARNPHVKDVRGLGLIIGIEFDVS 395 (451)
Q Consensus 330 ~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~--------------~~~~~~~~~~v~g~G~~~~~~~~~~ 395 (451)
+.+++.+.... ..++.+.+++.++.++|+ +..+.++ .++.++.+....+.|.++|+.++.
T Consensus 230 ~~~~~~~~~~~--~~~~~~~~~q~~~~~~l~---~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~g~f~~~~~~~- 303 (354)
T PRK06358 230 KNLAEKLLQMR--EPWSINTFADLAGQTLLD---DKEYIKKTIQWIKEEKDFLYNGLSEFKGIKVYKPSVNFIFFKLEK- 303 (354)
T ss_pred HHHHHHHHHhC--CCCcchHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcCCcceEEEEEcCc-
Confidence 67777775432 256778888888888874 2222111 334444444456678888888753
Q ss_pred hHHHHHHHHHCCceeeecCC-----CCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 013008 396 ATPVVDACRDSGLLVLTAGK-----GNVVRLVPPLIISEQELDQAVEILCKTL 443 (451)
Q Consensus 396 ~~~~~~~l~~~Gv~~~~~~~-----~~~iri~~~~~~t~e~i~~~l~~l~~~l 443 (451)
..++++.|+++||.+.++.. .+++|+++ .++++.+++++.|++++
T Consensus 304 ~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRls~---~~~~~~~~l~~~l~~~~ 353 (354)
T PRK06358 304 PIDLRKELLKKGILIRSCSNYRGLDENYYRVAV---KSREDNKKLLKALEVIL 353 (354)
T ss_pred hHHHHHHHHHCCeEEEECCCCCCCCCCEEEEEe---CCHHHHHHHHHHHHHHh
Confidence 47899999999999998632 25788863 37889999999998765
No 152
>PRK12414 putative aminotransferase; Provisional
Probab=99.92 E-value=4.7e-23 Score=206.30 Aligned_cols=317 Identities=16% Similarity=0.150 Sum_probs=205.9
Q ss_pred CEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccc--cCCCCCHHHHHHHHHHhhccCC-----CeEEecCCHHHHHHH
Q 013008 98 REYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHV--SNMYYSIPQIELAKRLVACSFA-----DRVFFSNTGTEANEA 170 (451)
Q Consensus 98 ~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~--~~~~~~~~~~~l~~~l~~~~~~-----e~v~~~~sG~eA~~~ 170 (451)
..+|||..|.. .++ .+|.+.+++.+.+.+.... ...+....+.++++++++.++. +++++|+|+++|+..
T Consensus 29 ~~~i~l~~g~p--~~~-~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~it~g~~~al~~ 105 (384)
T PRK12414 29 HDALNLSQGAP--NFA-PDPALVEGVARAMRDGHNQYAPMAGIAALREALAEKTERLYGARYDPASEVTVIASASEGLYA 105 (384)
T ss_pred CCeEEcCCCCC--CCC-CCHHHHHHHHHHHHhCCCCcCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEECChHHHHHH
Confidence 35788888875 344 4788999988877642111 1122234477788888777662 479999999999999
Q ss_pred HHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCC-CeeEeeCCCHHHHHHhcCCCCeEE
Q 013008 171 AIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMP-GVNFVEYGNIEATRKLIQPGKTAA 249 (451)
Q Consensus 171 al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~le~~l~~~~~aa 249 (451)
+++.+. .++|+|++.+|+|.++.......+ ..... .+... +.. -|++.|++.+++ ++++
T Consensus 106 ~~~~l~-----------~~gd~Vlv~~p~y~~~~~~~~~~g-~~~~~---v~~~~~~~~----~d~~~l~~~l~~-~~~~ 165 (384)
T PRK12414 106 AISALV-----------HPGDEVIYFEPSFDSYAPIVRLQG-ATPVA---IKLSPEDFR----VNWDEVAAAITP-RTRM 165 (384)
T ss_pred HHHHhc-----------CCCCEEEEeCCCccchHHHHHHcC-CEEEE---EecCccccc----cCHHHHHhhcCc-ccEE
Confidence 998664 268999999999987654433322 11100 11111 111 278999998865 4555
Q ss_pred EEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccc-cc-cccCC---Ccceeeeccccc-CCccc
Q 013008 250 VFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLW-AH-EHYGI---FPDIMTLAKPLA-GGLPI 323 (451)
Q Consensus 250 vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~-~~-~~~~~---~pdi~t~sK~lg-~G~~i 323 (451)
|++...++++|. +++++.+++|.++|++||+++|+||+|..|...+... .. ...+. ..-+.+|||.++ .|+|+
T Consensus 166 v~i~~p~NPTG~-~~s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRi 244 (384)
T PRK12414 166 IIVNTPHNPSAT-VFSAADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAERSVIVSSFGKSYHVTGWRV 244 (384)
T ss_pred EEEcCCCCCCCc-CCCHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCccCcEEEEecccccccCccceE
Confidence 555544555564 5689999999999999999999999998764444211 11 11121 223347999997 79999
Q ss_pred ccccccHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhc-----ChHHHHH------HHhCCCCcceeccc-ceeEEEE
Q 013008 324 GAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKIS-----NPAFLAS------KLARNPHVKDVRGL-GLIIGIE 391 (451)
Q Consensus 324 G~v~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~-----~~~~~~~------~~~~~~~~~~v~g~-G~~~~~~ 391 (451)
||+++++++++.+.......+++.+.+++.++.++|+.-. .+.+.++ .++.+. +...++. |+++|+.
T Consensus 245 G~~v~~~~l~~~l~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~g-~~~~~~~gg~~~~~~ 323 (384)
T PRK12414 245 GYCLAPAELMDEIRKVHQFMVFSADTPMQHAFAEALAEPASYLGLGAFYQRKRDLLARELAGSR-FELLPSEGSFFMLAR 323 (384)
T ss_pred EEEecCHHHHHHHHHHHhheecCCCcHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHhCC-CeecCCCcceEEEEc
Confidence 9999999998887654444567788889988887775211 0111111 223332 2223343 5666666
Q ss_pred ec----CChHHHHHH-HHHCCceeeecCC-------CCEEEEeCCCCCCHHHHHHHHHHHHH
Q 013008 392 FD----VSATPVVDA-CRDSGLLVLTAGK-------GNVVRLVPPLIISEQELDQAVEILCK 441 (451)
Q Consensus 392 ~~----~~~~~~~~~-l~~~Gv~~~~~~~-------~~~iri~~~~~~t~e~i~~~l~~l~~ 441 (451)
+. ....+++.. |.++||.+.|+.. .+++|++.+ .+++++++++++|.+
T Consensus 324 ~~~~~~~~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~~iRis~~--~~~~~~~~~~~rl~~ 383 (384)
T PRK12414 324 FRHFSDESDSDFVLRLIRDARVATIPLSAFYTDGTDTGLIRLSFS--KDDATLVEGARRLCS 383 (384)
T ss_pred ccccCCCCHHHHHHHHHHhCCEEEecchhhcCCCCCCCEEEEEec--CCHHHHHHHHHHHhh
Confidence 63 234566644 5578999998631 257888655 479999999999864
No 153
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.92 E-value=3.5e-23 Score=202.93 Aligned_cols=297 Identities=16% Similarity=0.071 Sum_probs=194.9
Q ss_pred CEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHhhccCCCeEEecCCHHHHHHHHHHHHHH
Q 013008 98 REYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARK 177 (451)
Q Consensus 98 ~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~e~v~~~~sG~eA~~~al~~a~~ 177 (451)
.++||+.+|.. ++|...+.+.+ ..+.. ++.. ..+|.+.++++++.++|++|+|+++|+..++.+ .
T Consensus 20 ~~~i~l~~ne~--p~~~~~~~~~~---~~~~~-------yp~~-~~~Lr~~ia~~~~~~~I~it~Gs~~al~~~~~~-~- 84 (330)
T PRK05664 20 ADWLDLSTGIA--PWPWPVPAIPA---DAWAR-------LPET-DDGLEAAARAYYGAPQLLPVAGSQAAIQALPRL-R- 84 (330)
T ss_pred HHheeecCCcC--CCCCCCcccCH---HHHHh-------CCCC-hHHHHHHHHHHhCCCCEEECcCHHHHHHHHHHc-c-
Confidence 35789988853 56765444432 22222 2221 268889999999999999999999999887531 1
Q ss_pred HhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEccccC
Q 013008 178 FQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQG 257 (451)
Q Consensus 178 ~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~~~ 257 (451)
++++|++.+|+|+++...+...+. .+..+| ++++++.++. ...++++.|.|+
T Consensus 85 -----------~gd~v~v~~P~y~~~~~~~~~~g~-------------~~~~v~---~~~~~~~~~~-~~~v~l~nP~NP 136 (330)
T PRK05664 85 -----------APGRVGVLSPCYAEHAHAWRRAGH-------------QVRELD---EAEVEAALDS-LDVLVVVNPNNP 136 (330)
T ss_pred -----------CCCEEEEcCCChHHHHHHHHHcCC-------------eEEEec---hhhHhhhhcC-CCEEEEeCCcCC
Confidence 588999999999887654433221 222233 3456666643 335677888644
Q ss_pred CCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccccccCCCcceeeeccccc-CCcccccccccHHHHhhc
Q 013008 258 EGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLA-GGLPIGAALVTEKVASAI 336 (451)
Q Consensus 258 ~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~t~sK~lg-~G~~iG~v~~~~~i~~~~ 336 (451)
+|. ..+.+.+++|.++|+++|++||+||+|.++............+-..-+.+|||++| .|+|+||+++++++++.+
T Consensus 137 -TG~-~~s~~~l~~l~~~~~~~~~~iI~DE~y~~~~~~~s~~~~~~~~~vi~~~SfSK~~gl~GlRiG~~v~~~~l~~~~ 214 (330)
T PRK05664 137 -TGR-RFDPARLLAWHARLAARGGWLVVDEAFMDNTPQHSLAACAHRPGLIVLRSFGKFFGLAGARLGFVLAEPALLRAL 214 (330)
T ss_pred -CCC-ccCHHHHHHHHHHHHhcCCEEEEECCcccCCCcccccccccCCCEEEEeeccccccCCCcceEEEEeCHHHHHHH
Confidence 443 57899999999999999999999999977632111111111111223448999998 799999999999999888
Q ss_pred cCCCccCCCCCcHHHHHHHHHHHHHhcC-hHHHHH----------HHhCCCCcceecccceeEEEEecCChHHHHHHHHH
Q 013008 337 NYGDHGSTFAGSPLVCNAAIAVLDKISN-PAFLAS----------KLARNPHVKDVRGLGLIIGIEFDVSATPVVDACRD 405 (451)
Q Consensus 337 ~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~----------~~~~~~~~~~v~g~G~~~~~~~~~~~~~~~~~l~~ 405 (451)
... ..+++.+.+++.++.++|+.... +...+. .++++. +....+.+.++++.+. +..++.+.|.+
T Consensus 215 ~~~--~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~~-~~~~~~~~~f~~~~~~-~~~~~~~~l~~ 290 (330)
T PRK05664 215 AEL--LGPWTVSGPTRWLAQAALADTPWQRRQRERLLAASQRLAALLRRHG-LTPAGGCALFQWVRTE-DAAALHEFLAR 290 (330)
T ss_pred HHh--cCCCCCCHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHCC-CcccCCcceEEEEecC-CHHHHHHHHHH
Confidence 643 23456678888888888863210 111111 222332 1111222356666653 57789999999
Q ss_pred CCceeeecCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 013008 406 SGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTLPV 445 (451)
Q Consensus 406 ~Gv~~~~~~~~~~iri~~~~~~t~e~i~~~l~~l~~~l~~ 445 (451)
+||.+...+..+.+|+++. .++++++++++.|++..++
T Consensus 291 ~gi~v~~f~~~~~iRis~~--~~~~~~~~l~~al~~~~~~ 328 (330)
T PRK05664 291 RGILTRLFEQPASLRFGLP--ADEADWARLDQALLAYRKE 328 (330)
T ss_pred CCeEEEECCCCCeEEEECC--CCHHHHHHHHHHHHHHHhh
Confidence 9999987654478898655 3678888888888766554
No 154
>PRK09105 putative aminotransferase; Provisional
Probab=99.92 E-value=6.4e-23 Score=204.02 Aligned_cols=304 Identities=17% Similarity=0.145 Sum_probs=202.2
Q ss_pred CEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHhhccC--CCeEEecCCHHHHHHHHHHHH
Q 013008 98 REYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSF--ADRVFFSNTGTEANEAAIKFA 175 (451)
Q Consensus 98 ~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~e~v~~~~sG~eA~~~al~~a 175 (451)
+.++++..|.. .++ .+|.+.+++.+.+..... |+.....+|.+.+++.++ .++|++++|+++++..+++..
T Consensus 43 ~~~i~l~~~~~--~~~-~~~~~~~a~~~~~~~~~~----Y~~~~~~~Lr~aia~~~~v~~e~I~it~Gs~~ai~~~~~~l 115 (370)
T PRK09105 43 EGAVFLNANEC--PLG-PSPAARDAAARSAALSGR----YDLELEDDLRTLFAAQEGLPADHVMAYAGSSEPLNYAVLAF 115 (370)
T ss_pred CCcEEecCCCC--CCC-CCHHHHHHHHHHHHHhcC----CCCchHHHHHHHHHHHhCcChhhEEEcCChHHHHHHHHHHH
Confidence 45677766643 354 678999999887654322 333336788888888876 789999999999999999866
Q ss_pred HHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEccc
Q 013008 176 RKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPI 255 (451)
Q Consensus 176 ~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~ 255 (451)
. +++|+|++.+|+|.++...+...+. .... .+..++.. .|++++++.. ++....++++|.
T Consensus 116 ~-----------~~gd~Vli~~P~y~~~~~~~~~~g~-~~~~---v~~~~~~~----~d~~~l~~~~-~~~~~v~l~nP~ 175 (370)
T PRK09105 116 T-----------SPTAGLVTADPTYEAGWRAADAQGA-PVAK---VPLRADGA----HDVKAMLAAD-PNAGLIYICNPN 175 (370)
T ss_pred c-----------CCCCEEEEeCCChHHHHHHHHHcCC-eEEE---ecCCCCCC----CCHHHHHhcC-CCCCEEEEeCCC
Confidence 4 1688999999999887654433322 1111 11111111 2778887763 333445556664
Q ss_pred cCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccccccCCCcce---eeeccccc-CCcccccccccHH
Q 013008 256 QGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDI---MTLAKPLA-GGLPIGAALVTEK 331 (451)
Q Consensus 256 ~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi---~t~sK~lg-~G~~iG~v~~~~~ 331 (451)
+++|. ..+.+.++++.+.|+ +|+++|+||+|..|+. +. ......+..+++ .+|||.+| .|+|+||++++++
T Consensus 176 -NPTG~-~~~~~~l~~l~~~~~-~~~~lIvDEaY~~f~~-~~-s~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~~~ 250 (370)
T PRK09105 176 -NPTGT-VTPRADIEWLLANKP-AGSVLLVDEAYIHFSD-AP-SVVDLVAQRKDLIVLRTFSKLYGMAGMRLGLAAARPD 250 (370)
T ss_pred -CCCCc-CcCHHHHHHHHHhCC-CCcEEEEECchHHhcc-Cc-chHHHHhhCCCEEEEecccHhhcCCccceeeeecCHH
Confidence 44454 578888999988764 5999999999977742 11 111111223443 37899998 6999999999999
Q ss_pred HHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH--------------HHhCCCCcceecccceeEEEEecCChH
Q 013008 332 VASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS--------------KLARNPHVKDVRGLGLIIGIEFDVSAT 397 (451)
Q Consensus 332 i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~--------------~~~~~~~~~~v~g~G~~~~~~~~~~~~ 397 (451)
+++.+... ..++.+.+++.++.++|+ +++++++ .++.+. +...++.|.++++.+..+..
T Consensus 251 ~i~~l~~~---~~~~~~~~~~~aa~~~L~---~~~~~~~~~~~~~~~r~~l~~~L~~~g-~~~~~~~~~f~~~~~~~~~~ 323 (370)
T PRK09105 251 LLAKLARF---GHNPLPVPAAAAGLASLR---DPKLVPQRRAENAAVREDTIAWLKKKG-YKCTPSQANCFMVDVKRPAK 323 (370)
T ss_pred HHHHHHhc---CCCCcCHHHHHHHHHHHh---CHHHHHHHHHHHHHHHHHHHHHHHHCC-CCcCCCCCcEEEEeCCCCHH
Confidence 99888643 334467777778777775 2333322 122232 33345667777776655677
Q ss_pred HHHHHHHHCCceeeec--CCCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 013008 398 PVVDACRDSGLLVLTA--GKGNVVRLVPPLIISEQELDQAVEILCKTL 443 (451)
Q Consensus 398 ~~~~~l~~~Gv~~~~~--~~~~~iri~~~~~~t~e~i~~~l~~l~~~l 443 (451)
++++.|.++||.+... +..+++|+++. ++++++++++.|++++
T Consensus 324 ~l~~~L~~~gI~v~~~~~~~~~~~Ris~~---~~~~~~~l~~al~~~~ 368 (370)
T PRK09105 324 AVADAMAKQGVFIGRSWPIWPNWVRVTVG---SEEEMAAFRSAFAKVM 368 (370)
T ss_pred HHHHHHHHCCcEEecCCCCCCCeEEEEcC---CHHHHHHHHHHHHHHh
Confidence 8999999999998422 11367899744 6788999999988765
No 155
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.92 E-value=5.7e-23 Score=206.42 Aligned_cols=320 Identities=16% Similarity=0.063 Sum_probs=205.0
Q ss_pred ecCCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhccccc-CCCCCHHHHHHHHHHhhccC------C-CeEEecCCHH
Q 013008 94 DAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVS-NMYYSIPQIELAKRLVACSF------A-DRVFFSNTGT 165 (451)
Q Consensus 94 d~~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~-~~~~~~~~~~l~~~l~~~~~------~-e~v~~~~sG~ 165 (451)
+..|+.++||..|.. .++ .++.+.+++.+.+.....+. ..+..+.+..+++++.+.++ . ++|++|+|++
T Consensus 24 ~~~~~~~i~l~~~~p--~~~-~~~~~~~a~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~~~i~it~Ga~ 100 (393)
T TIGR03538 24 PPASKPPIALSIGEP--KHP-TPAFVLEALRENLHGLSTYPTTKGLPELRQAIARWLERRFDLPTGVDPERHVLPVNGTR 100 (393)
T ss_pred hhcCCCeEEecCCCC--CCC-CCHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhhCCcccCCCCceEEECCCcH
Confidence 346788899988875 344 57889999988765422211 11223346667777765532 4 3799999999
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCCCCce--EEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcC
Q 013008 166 EANEAAIKFARKFQRHSNPDSKEPATE--FVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQ 243 (451)
Q Consensus 166 eA~~~al~~a~~~~~~~~~~~~~~~~~--ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~ 243 (451)
+|+..+++++.. +++. |++.+|+|.++...+...+ ..... .+..++..+. .|++++++.+.
T Consensus 101 ~al~~~~~~l~~-----------~gd~~~vlv~~P~y~~~~~~~~~~g-~~~~~---v~~~~~~~~~--~d~~~l~~~~~ 163 (393)
T TIGR03538 101 EALFAFAQAVIN-----------PGQAPLVVMPNPFYQIYEGAALLAG-AEPYF---LNCTAENGFL--PDFDAVPESVW 163 (393)
T ss_pred HHHHHHHHHHcC-----------CCCcceEEecCCCCcchHHHHHhcC-CeEEE---eeccccCCCC--CCHHHHHHHHh
Confidence 999999997652 4654 9999999988764432222 11111 1111110000 27888988875
Q ss_pred CCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCccc--cccc----ccccC-----CCcceee
Q 013008 244 PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTG--YLWA----HEHYG-----IFPDIMT 312 (451)
Q Consensus 244 ~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G--~~~~----~~~~~-----~~pdi~t 312 (451)
+ ++++|++...++++| .+++.+.+++|.++|++||++||+||+|..+...+ .... ....+ ...-+.+
T Consensus 164 ~-~~k~i~l~~p~NPtG-~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S 241 (393)
T TIGR03538 164 R-RCQLLFVCSPGNPTG-AVLSLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHS 241 (393)
T ss_pred h-cceEEEEeCCCCCcC-cccCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhcccccccccccEEEEec
Confidence 4 445554443344445 46799999999999999999999999998764332 1111 11111 1122347
Q ss_pred eccccc-CCcccccccccHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH--------------HHhCC-C
Q 013008 313 LAKPLA-GGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS--------------KLARN-P 376 (451)
Q Consensus 313 ~sK~lg-~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~--------------~~~~~-~ 376 (451)
|||.++ .|+|+||+++++++++.+.......+++.+++.+.++.+++. .+++.++ .++++ +
T Consensus 242 ~SK~~~~~GlRvG~~i~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~L~~~~~ 318 (393)
T TIGR03538 242 LSKRSNLPGLRSGFVAGDAEILKAFLRYRTYHGCAMPIPTQLASIAAWN---DEQHVRENRALYREKFAAVLEILGQVLD 318 (393)
T ss_pred chhhcCCcccceEEEecCHHHHHHHHHHHHhhccCcCHHHHHHHHHHhc---ChHHHHHHHHHHHHHHHHHHHHHHhhCc
Confidence 999876 689999999999998877543333345667888888777764 2222222 11121 1
Q ss_pred CcceecccceeEEEEecCChHHHHHHHH-HCCceeeecCC-----------CCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 013008 377 HVKDVRGLGLIIGIEFDVSATPVVDACR-DSGLLVLTAGK-----------GNVVRLVPPLIISEQELDQAVEILCKT 442 (451)
Q Consensus 377 ~~~~v~g~G~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~~~-----------~~~iri~~~~~~t~e~i~~~l~~l~~~ 442 (451)
. .....|+++|+.+..+..++++.|+ ++||.+.|+.. .+.+||++ +.+++++++++++|.+.
T Consensus 319 ~--~~p~gg~f~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~~~Ris~--~~~~~~l~~~l~~l~~~ 392 (393)
T TIGR03538 319 L--ELPDAGFYLWPKVPGDDEAFARALYEEENVTVLPGRFLAREAEGVNPGEGRVRIAL--VAPLEECVEAAERIRSF 392 (393)
T ss_pred c--cCCCeeEEEEEECCCCHHHHHHHHHHHCCEEEeCCccccccccCCCCCCCEEEEEe--cCCHHHHHHHHHHHHHh
Confidence 1 1344588888887645677888886 57999987631 24677754 45799999999999864
No 156
>PRK08363 alanine aminotransferase; Validated
Probab=99.92 E-value=1.1e-22 Score=204.56 Aligned_cols=326 Identities=16% Similarity=0.087 Sum_probs=205.4
Q ss_pred CCCEEEeeccCcccc-cCCCCCHHHHHHHHHHHhhccccc--CCCCCHHHHHHHHHHhhccC----CCeEEecCCHHHHH
Q 013008 96 EGREYLDLSSGIAVN-ALGHGDADWIKAVVDQANVLTHVS--NMYYSIPQIELAKRLVACSF----ADRVFFSNTGTEAN 168 (451)
Q Consensus 96 ~G~~~iD~~~~~~~~-~lG~~~p~v~~a~~~~~~~~~~~~--~~~~~~~~~~l~~~l~~~~~----~e~v~~~~sG~eA~ 168 (451)
+|..+||+..|.... .++ .+|.+.+++.+.+......+ ..+..+.++.+++++.+.++ .++|++|+|+++|+
T Consensus 28 ~~~~~i~l~~g~p~~~~~~-p~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al 106 (398)
T PRK08363 28 KGIKVIRLNIGDPVKFDFQ-PPEHMKEAYCRAIKEGHNYYGPSEGLPELREAIVKREKRKNGVDITPDDVRVTAAVTEAL 106 (398)
T ss_pred cCCCeEEEeCCCCCcCCCC-CCHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHH
Confidence 467899999988742 344 57889999988876432111 11222234455555444333 67899999999999
Q ss_pred HHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCC-CeeEeeCCCHHHHHHhcCCCCe
Q 013008 169 EAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMP-GVNFVEYGNIEATRKLIQPGKT 247 (451)
Q Consensus 169 ~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~le~~l~~~~~ 247 (451)
..+++++. .++|.|++.+|+|.++...+...+...... .+... +.. .|++.+++.+.++..
T Consensus 107 ~~~~~~~~-----------~~gd~Vl~~~p~y~~~~~~~~~~g~~~v~~---~~~~~~~~~----~d~~~l~~~~~~~~~ 168 (398)
T PRK08363 107 QLIFGALL-----------DPGDEILIPGPSYPPYTGLVKFYGGVPVEY---RTIEEEGWQ----PDIDDIRKKITEKTK 168 (398)
T ss_pred HHHHHHhC-----------CCCCEEEEcCCCCcchHHHHHHcCCEEEEe---ccccccCCc----CCHHHHHhhCCcceE
Confidence 99998664 268999999999988765443333221110 01111 111 278899988865333
Q ss_pred EEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccccccCCC---cceeeeccccc-CCccc
Q 013008 248 AAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIF---PDIMTLAKPLA-GGLPI 323 (451)
Q Consensus 248 aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~---pdi~t~sK~lg-~G~~i 323 (451)
.++++.| ++++|. ..+.+.+++|.++|++||+++|+||+|..+-..+.........-. .-+.+|||.++ +|+|+
T Consensus 169 ~v~l~~p-~NPtG~-~~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRi 246 (398)
T PRK08363 169 AIAVINP-NNPTGA-LYEKKTLKEILDIAGEHDLPVISDEIYDLMTYEGKHVSPGSLTKDVPVIVMNGLSKVYFATGWRL 246 (398)
T ss_pred EEEEECC-CCCCCc-CcCHHHHHHHHHHHHHcCeEEEEhhhhhhhccCCcccCHHHcCcCCcEEEEecchhccCCccceE
Confidence 4444445 444454 568999999999999999999999999876433322111111111 22348999976 68999
Q ss_pred ccccc--cHHHHhhccCC---CccCCCCCcHHHHHHHHHHHHHhcChHHHHH--------------HHhCCCCcceeccc
Q 013008 324 GAALV--TEKVASAINYG---DHGSTFAGSPLVCNAAIAVLDKISNPAFLAS--------------KLARNPHVKDVRGL 384 (451)
Q Consensus 324 G~v~~--~~~i~~~~~~~---~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~--------------~~~~~~~~~~v~g~ 384 (451)
||+++ ++++++.+... ....+++.+.+++.++.++|+. .++++++ .++.++.+....+.
T Consensus 247 G~~~~~~~~~~~~~l~~~~~~~~~~~~~~s~~~q~~~~~~l~~--~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~ 324 (398)
T PRK08363 247 GYIYFVDPEGKLAEVREAIDKLARIRLCPNTPAQFAAIAGLTG--PMDYLEEYMKKLKERRDYIYKRLNEIPGISTTKPQ 324 (398)
T ss_pred EEEEEeCcHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHhC--ChHHHHHHHHHHHHHHHHHHHHHhcCCCCEecCCC
Confidence 99987 66655554321 1122466788888888888752 2222222 23444444333444
Q ss_pred c-eeEEEEecC----ChHHHHHH-HHHCCceeeecCC-----CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 013008 385 G-LIIGIEFDV----SATPVVDA-CRDSGLLVLTAGK-----GNVVRLVPPLIISEQELDQAVEILCKTLPVL 446 (451)
Q Consensus 385 G-~~~~~~~~~----~~~~~~~~-l~~~Gv~~~~~~~-----~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~ 446 (451)
| +++|+.++. ...+++.. |.++||.+.|+.. .+++|++. ..+++++++++++|.+++.+.
T Consensus 325 g~~~~~~~l~~~~~~~~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~--~~~~~~l~~~l~~l~~~~~~~ 395 (398)
T PRK08363 325 GAFYIFPRIEEGPWKDDKEFVLDVLHEAHVLFVHGSGFGEYGAGHFRLVF--LPPVEILEEAMDRFEEFMRER 395 (398)
T ss_pred eEEEEEEEeccCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEe--cCCHHHHHHHHHHHHHHHHHh
Confidence 4 455556642 34556544 5688999988641 25788865 468999999999999988753
No 157
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.92 E-value=6.3e-23 Score=203.41 Aligned_cols=305 Identities=16% Similarity=0.090 Sum_probs=199.9
Q ss_pred CCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHhhccC-----CCeEEecCCHHHHHHH
Q 013008 96 EGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSF-----ADRVFFSNTGTEANEA 170 (451)
Q Consensus 96 ~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-----~e~v~~~~sG~eA~~~ 170 (451)
++.+++|+.++... ...+|.+.+++.+......+....+..+.+.++++++.+.++ .++|++|+|+++|+..
T Consensus 19 ~~~~~i~l~~~~p~---~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~I~it~G~~~~i~~ 95 (357)
T TIGR03539 19 HPDGIVDLSVGTPV---DPVPPLIRAALAAAADAPGYPQTWGTPELREAIVDWLERRRGVPGLDPTAVLPVIGTKELVAW 95 (357)
T ss_pred CCCCeEEccCCCCC---CCCCHHHHHHHHHHHhhCCCCcccCCHHHHHHHHHHHHHhcCCCCCCcCeEEEccChHHHHHH
Confidence 45578899887642 235688888887765433222222233446777777766533 5899999999999998
Q ss_pred HHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEE
Q 013008 171 AIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAV 250 (451)
Q Consensus 171 al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aav 250 (451)
+++++. . .++|.|++.+|+|.++....... +. ..+..+|++.+ ...++++|
T Consensus 96 ~~~~l~--~--------~~gd~Vl~~~p~y~~~~~~~~~~-g~--------------~~~~v~~~~~l----~~~~~~~v 146 (357)
T TIGR03539 96 LPTLLG--L--------GPGDTVVIPELAYPTYEVGALLA-GA--------------TPVAADDPTEL----DPVGPDLI 146 (357)
T ss_pred HHHHHc--C--------CCCCEEEECCCCcHHHHHHHHhc-CC--------------EEeccCChhhc----CccCccEE
Confidence 877542 1 16899999999998775443221 11 11222344433 22356777
Q ss_pred EEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCccccccc-ccc------cCCCcceeeeccccc-CCcc
Q 013008 251 FVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWA-HEH------YGIFPDIMTLAKPLA-GGLP 322 (451)
Q Consensus 251 i~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~-~~~------~~~~pdi~t~sK~lg-~G~~ 322 (451)
+++..++++|. +.+.+.+++|.++|++||+++|+||+|..|.+.+.... ... .....-+.+|||.++ +|+|
T Consensus 147 ~~~~p~NPtG~-~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~R 225 (357)
T TIGR03539 147 WLNSPGNPTGR-VLSVDELRAIVAWARERGAVVASDECYLELGWEGRPVSILDPRVCGGDHTGLLAVHSLSKRSNLAGYR 225 (357)
T ss_pred EEeCCCCCcCc-cCCHHHHHHHHHHHHHcCeEEEEecchhhhccCCCCccceecccCCCccccEEEEeccccccCCCcee
Confidence 77665556664 67899999999999999999999999987755443211 110 011122337999996 6899
Q ss_pred cccccccHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH--------------HHhCCCCcceecc-ccee
Q 013008 323 IGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS--------------KLARNPHVKDVRG-LGLI 387 (451)
Q Consensus 323 iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~--------------~~~~~~~~~~v~g-~G~~ 387 (451)
+||+++++++++.+........++.+.+++.++.++|+. +.+.++ .+++.+ +....+ .|++
T Consensus 226 ~G~~i~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~---~~~~~~~~~~~~~~~~~~~~~L~~~g-~~~~~p~~~~~ 301 (357)
T TIGR03539 226 AGFVAGDPALVAELLTVRKHAGLMVPAPVQAAMVAALGD---DGHVAEQKARYAARRAQLKPALEKAG-FRIDHSEAGLY 301 (357)
T ss_pred EEEEecCHHHHHHHHHHHhhcccCCCHHHHHHHHHHcCC---HHHHHHHHHHHHHHHHHHHHHHHHcC-CCCcCCCccEE
Confidence 999999999988875433334566788888888777742 222211 222332 222223 3567
Q ss_pred EEEEecCChHHHHHHHHHCCceeeecCC-----CCEEEEeCCCCCCHHHHHHHHHHH
Q 013008 388 IGIEFDVSATPVVDACRDSGLLVLTAGK-----GNVVRLVPPLIISEQELDQAVEIL 439 (451)
Q Consensus 388 ~~~~~~~~~~~~~~~l~~~Gv~~~~~~~-----~~~iri~~~~~~t~e~i~~~l~~l 439 (451)
+|+.+.....++.+.|.++||.+.|+.. .+++|+++. .+++++++++++|
T Consensus 302 ~~~~~~~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~iRis~~--~~~~~i~~~~~~l 356 (357)
T TIGR03539 302 LWATRGEDAWDTVDRLAELGILVAPGDFYGPAGSQHVRVALT--ATDERIAAAVARL 356 (357)
T ss_pred EEEECCCCHHHHHHHHHhCCEEECCccccCCCCCCeEEEEec--CCHHHHHHHHHhh
Confidence 7776654667788899999999988631 267888665 4789999999876
No 158
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.92 E-value=5.5e-23 Score=205.31 Aligned_cols=306 Identities=15% Similarity=0.175 Sum_probs=199.3
Q ss_pred CCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHhhccC--CCeEEecCCHHHHHHHHHH
Q 013008 96 EGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSF--ADRVFFSNTGTEANEAAIK 173 (451)
Q Consensus 96 ~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~e~v~~~~sG~eA~~~al~ 173 (451)
.+..+|||..|.. ++| .+|.+.+++.+. ... ..++.....+|.++++++++ .++|++++|+++++..+++
T Consensus 50 ~~~~~i~l~~n~~--p~~-~~~~v~~a~~~~-~~~----~~Yp~~~~~~lr~~ia~~~~~~~~~I~~t~Ga~~~i~~~~~ 121 (380)
T PLN03026 50 KPEDIVKLDANEN--PYG-PPPEVLEALGNM-KFP----YVYPDPESRRLRAALAEDSGLESENILVGCGADELIDLLMR 121 (380)
T ss_pred CccceEEccCCCC--CCC-CCHHHHHHHHhh-Hhh----ccCCCCCHHHHHHHHHHHhCcChhhEEEcCCHHHHHHHHHH
Confidence 3568899988754 454 668888887652 211 11233335678888888886 6789999999999999888
Q ss_pred HHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEc
Q 013008 174 FARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVE 253 (451)
Q Consensus 174 ~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~e 253 (451)
+.. +++++|++.+|+|+.+....... |..... .+...+.. .|+++|++.+...++++|++.
T Consensus 122 ~~~-----------~~gd~Vlv~~P~y~~y~~~~~~~-g~~~~~---v~~~~~~~----~d~~~l~~~~~~~~~~~v~l~ 182 (380)
T PLN03026 122 CVL-----------DPGDKIIDCPPTFGMYVFDAAVN-GAEVIK---VPRTPDFS----LDVPRIVEAVETHKPKLLFLT 182 (380)
T ss_pred Hhc-----------CCCCEEEEcCCChHHHHHHHHHc-CCEEEE---eecCCCCC----cCHHHHHHHHhccCCcEEEEe
Confidence 654 16889999999997654333222 211111 11111111 278999998843345666655
Q ss_pred cccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCccccccc-ccccCCCcceeeeccccc-CCcccccccccHH
Q 013008 254 PIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWA-HEHYGIFPDIMTLAKPLA-GGLPIGAALVTEK 331 (451)
Q Consensus 254 p~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~-~~~~~~~pdi~t~sK~lg-~G~~iG~v~~~~~ 331 (451)
..++++|... +.+.+++|.+. . +++|+||+|..|...+.... .+.++...-+-+|||.+| .|+|+||++++++
T Consensus 183 ~P~NPTG~~~-~~~~l~~l~~~---~-~~vi~DeaY~~~~~~~~~~~~~~~~~~viv~~SfSK~~glaGlRiGy~~~~~~ 257 (380)
T PLN03026 183 SPNNPDGSII-SDDDLLKILEL---P-ILVVLDEAYIEFSTQESRMKWVKKYDNLIVLRTFSKRAGLAGLRVGYGAFPLS 257 (380)
T ss_pred CCCCCCCCCC-CHHHHHHHHhc---C-CEEEEECcchhhcCCcchHHHHHhCCCEEEEecchHhhcCccccceeeecCHH
Confidence 5566666654 55555555443 3 89999999988743332111 111111222348999999 7999999999999
Q ss_pred HHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH--------------HHhCCCCcceecccceeEEEEec--CC
Q 013008 332 VASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS--------------KLARNPHVKDVRGLGLIIGIEFD--VS 395 (451)
Q Consensus 332 i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~--------------~~~~~~~~~~v~g~G~~~~~~~~--~~ 395 (451)
+++.+.... ..++.+.+++.++.++|+. .+++++ .++.++.+...+..|.++++.+. .+
T Consensus 258 ~i~~l~~~~--~~~~~~~~~q~aa~~aL~~---~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~ 332 (380)
T PLN03026 258 IIEYLWRAK--QPYNVSVAAEVAACAALSN---PKYLEDVKNALVEERERLFGLLKEVPFLEPYPSDANFILCRVTSGRD 332 (380)
T ss_pred HHHHHHHhc--CCCCCCHHHHHHHHHHhhC---HHHHHHHHHHHHHHHHHHHHHHHHCCCCeECCCCCeEEEEECCCCCC
Confidence 998875432 2466788888888888852 222222 23344433334566888888874 35
Q ss_pred hHHHHHHHHHCCceeeecCC---CCEEEEeCCCCCCHHHHHHHHHHHHH
Q 013008 396 ATPVVDACRDSGLLVLTAGK---GNVVRLVPPLIISEQELDQAVEILCK 441 (451)
Q Consensus 396 ~~~~~~~l~~~Gv~~~~~~~---~~~iri~~~~~~t~e~i~~~l~~l~~ 441 (451)
..++++.|+++||.+.++.. .+++||++. +.++++++++.|++
T Consensus 333 ~~~~~~~l~~~gI~v~~~~~~~~~~~lRis~~---~~~~~~~l~~al~~ 378 (380)
T PLN03026 333 AKKLKEDLAKMGVMVRHYNSKELKGYIRVSVG---KPEHTDALMEALKQ 378 (380)
T ss_pred HHHHHHHHHHCCeEEEECCCCCCCCEEEEecC---CHHHHHHHHHHHHH
Confidence 77899999999999987632 367898644 67788888888865
No 159
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.92 E-value=1e-22 Score=205.16 Aligned_cols=326 Identities=14% Similarity=0.113 Sum_probs=206.0
Q ss_pred CCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhc-c--cccCCCCCHHHHHHHHHHhhccC----CC-eEEecCCHHHH
Q 013008 96 EGREYLDLSSGIAVNALGHGDADWIKAVVDQANVL-T--HVSNMYYSIPQIELAKRLVACSF----AD-RVFFSNTGTEA 167 (451)
Q Consensus 96 ~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~-~--~~~~~~~~~~~~~l~~~l~~~~~----~e-~v~~~~sG~eA 167 (451)
.|..++||..+... +..++.+.+++.+.+... . +....+....+..+++++.+.++ .+ +|++|+|+++|
T Consensus 31 ~~~~~~~l~~g~p~---~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~~ia~~l~~~~~~~~~~~~~I~it~G~~~a 107 (403)
T PRK08636 31 AGEDIIDFSMGNPD---GPTPQHIIDKLCESAQKPKTHGYSVSKGIYKLRLAICNWYKRKYNVDLDPETEVVATMGSKEG 107 (403)
T ss_pred cCCCEEEcCCcCCC---CCCCHHHHHHHHHHhcCCccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEECCChHHH
Confidence 45678898887542 334566777777665432 1 11111222346677777765544 45 79999999999
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHH----HHHHhcC
Q 013008 168 NEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIE----ATRKLIQ 243 (451)
Q Consensus 168 ~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~----~le~~l~ 243 (451)
+..++++.. +++|.|++.+|+|.++.......+.... ..+. ....+.. + |++ .++++++
T Consensus 108 l~~~~~~l~-----------~~gd~Vlv~~P~y~~~~~~~~~~g~~~~-~v~~-~~~~~~~-~---d~~~l~~~l~~~~~ 170 (403)
T PRK08636 108 YVHLVQAIT-----------NPGDVAIVPDPAYPIHSQAFILAGGNVH-KMPL-EYNEDFE-L---DEDQFFENLEKALR 170 (403)
T ss_pred HHHHHHHhC-----------CCCCEEEEcCCCCcchHHHHHhcCCEEE-EEec-cccccCc-c---ChhhhhhHHHHHHh
Confidence 999999665 2689999999999888655443332111 1000 0001100 1 333 5566665
Q ss_pred C--CCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCccccc----cccccc-CCCcceeeeccc
Q 013008 244 P--GKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYL----WAHEHY-GIFPDIMTLAKP 316 (451)
Q Consensus 244 ~--~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~----~~~~~~-~~~pdi~t~sK~ 316 (451)
. .++.++++...++++| .+++.+.+++|.++|++|+++||+||+|..+-..+.. ...+.. ++...+.+|||.
T Consensus 171 ~~~~~~~~i~~~~P~NPTG-~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~ 249 (403)
T PRK08636 171 ESSPKPKYVVVNFPHNPTT-ATVEKSFYERLVALAKKERFYIISDIAYADITFDGYKTPSILEVEGAKDVAVESYTLSKS 249 (403)
T ss_pred hccCCceEEEEeCCCCCCC-ccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCCCCCCChhcCCCccccEEEEEecccc
Confidence 2 3455555553344444 4679999999999999999999999999877433321 111111 122233479999
Q ss_pred cc-CCcccccccccHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH--------------HHhCCCCccee
Q 013008 317 LA-GGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS--------------KLARNPHVKDV 381 (451)
Q Consensus 317 lg-~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~--------------~~~~~~~~~~v 381 (451)
++ .|+|+||+++++++++.+........++.+++.+.++..+++. .+.++++ .+++.. +...
T Consensus 250 ~~~~GlRiG~iv~~~~li~~~~~~~~~~~~~~~~~~q~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~L~~~~-~~~~ 326 (403)
T PRK08636 250 YNMAGWRVGFVVGNKKLVGALKKIKSWLDYGMFTPIQVAATIALDG--DQSCVEEIRETYRKRRDVLIESFANAG-WELQ 326 (403)
T ss_pred cCCccceeeeeeCCHHHHHHHHHHHHHhcccCChHHHHHHHHHHhC--cHHHHHHHHHHHHHHHHHHHHHHHHCC-Cccc
Confidence 97 7999999999999998876433223455566677776666542 2333322 122222 2222
Q ss_pred -cccceeEEEEecC-----ChHHHHHHHH-HCCceeeecC---C--CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHh
Q 013008 382 -RGLGLIIGIEFDV-----SATPVVDACR-DSGLLVLTAG---K--GNVVRLVPPLIISEQELDQAVEILCKTLPVLD 447 (451)
Q Consensus 382 -~g~G~~~~~~~~~-----~~~~~~~~l~-~~Gv~~~~~~---~--~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~~ 447 (451)
...|+++|+.++. ...+++..++ ++||.+.|+. . .+++||+.. .+++++++++++|.++++..+
T Consensus 327 ~p~~g~~~~~~l~~~~~~~~~~~l~~~ll~~~gV~v~pg~~f~~~~~~~iRi~~~--~~~~~l~~~~~rl~~~l~~~~ 402 (403)
T PRK08636 327 KPRASMFVWAKIPEPARHLGSLEFSKQLLTEAKVAVSPGIGFGEYGDEYVRIALI--ENENRIRQAARNIKKFLKELE 402 (403)
T ss_pred CCCcceEEEEECCCccCCCCHHHHHHHHHHhCCEEEecchhhCcCCCCeEEEEec--CCHHHHHHHHHHHHHHHHhhc
Confidence 3468888888842 2567887766 6899999863 1 367898664 689999999999999987643
No 160
>PRK07550 hypothetical protein; Provisional
Probab=99.92 E-value=6.7e-23 Score=205.47 Aligned_cols=322 Identities=16% Similarity=0.129 Sum_probs=208.4
Q ss_pred CCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhccc-cc--CCCCCHHHHHHHHHHhhccC----CCeEEecCCHHHHH
Q 013008 96 EGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTH-VS--NMYYSIPQIELAKRLVACSF----ADRVFFSNTGTEAN 168 (451)
Q Consensus 96 ~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~-~~--~~~~~~~~~~l~~~l~~~~~----~e~v~~~~sG~eA~ 168 (451)
.|..++||.++... +. .++.+.+++.+.+..... .+ ..+..+.+..+++++.+..+ .++|++|+|+++|+
T Consensus 27 ~~~~~i~l~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al 103 (386)
T PRK07550 27 ADGPLIDLSQAVPG--YP-PPPELLRALAEAAADPAAHLYGPVEGLPELREAYAAHYSRLYGAAISPEQVHITSGCNQAF 103 (386)
T ss_pred cCCCeEEeCCCCCC--CC-CCHHHHHHHHHHHhCcCCcCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHH
Confidence 35668999988763 22 467888888887643111 11 11223335667777665543 68999999999999
Q ss_pred HHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeE
Q 013008 169 EAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTA 248 (451)
Q Consensus 169 ~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a 248 (451)
..+++++.. ++|+|++.+|+|.++....... +..... .+..++.... .|+++++++++.+..+
T Consensus 104 ~~~~~~l~~-----------~gd~Vlv~~p~y~~~~~~~~~~-g~~~~~---v~~~~~~~~~--~~~~~l~~~~~~~~~~ 166 (386)
T PRK07550 104 WAAMVTLAG-----------AGDEVILPLPWYFNHKMWLDML-GIRPVY---LPCDEGPGLL--PDPAAAEALITPRTRA 166 (386)
T ss_pred HHHHHHhcC-----------CCCEEEEcCCCCcchHHHHHhc-CCEEEE---EecCCCcCCC--CCHHHHHHHhcccCcE
Confidence 998887641 6899999999997775433222 211100 1111110000 2789999999764445
Q ss_pred EEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccc-cc-cccccC---CCcceeeeccccc-CCcc
Q 013008 249 AVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGY-LW-AHEHYG---IFPDIMTLAKPLA-GGLP 322 (451)
Q Consensus 249 avi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~-~~-~~~~~~---~~pdi~t~sK~lg-~G~~ 322 (451)
++++.|. +++|. .++.+.+++|.++|++||+++|+||+|.+|...+. .. .....+ ....+.+|||.++ +|+|
T Consensus 167 v~~~~P~-NPtG~-~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R 244 (386)
T PRK07550 167 IALVTPN-NPTGV-VYPPELLHELYDLARRHGIALILDETYRDFDSGGGAPHDLFADPDWDDTLVHLYSFSKSYALTGHR 244 (386)
T ss_pred EEEeCCC-CCCCc-ccCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCcchhhCCCccccEEEEecchhhccCcccc
Confidence 5666665 44554 56899999999999999999999999987732221 11 111111 1233458999998 7999
Q ss_pred cccccccHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH--------------HHhCCCCcceecccceeE
Q 013008 323 IGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS--------------KLARNPHVKDVRGLGLII 388 (451)
Q Consensus 323 iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~--------------~~~~~~~~~~v~g~G~~~ 388 (451)
+||+++++++++.+.......+.+.+.+++.++..+++.+ +++.++ .++.++.+......|.++
T Consensus 245 iG~i~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~g~~~~ 322 (386)
T PRK07550 245 VGAVVASPARIAEIEKFMDTVAICAPRIGQIAVAWGLPNL--ADWRAGNRAEIARRRDAFRAVFARLPGWELLASGAYFA 322 (386)
T ss_pred eEeeecCHHHHHHHHHHHhhcccCCCcHHHHHHHHHhccH--HHHHHHHHHHHHHHHHHHHHHHHhCCCceeCCCceEEE
Confidence 9999999998887765444445566788888887777532 222211 223333222223446777
Q ss_pred EEEec---CChHHHHHHHH-HCCceeeecC-----CCCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 013008 389 GIEFD---VSATPVVDACR-DSGLLVLTAG-----KGNVVRLVPPLIISEQELDQAVEILCKT 442 (451)
Q Consensus 389 ~~~~~---~~~~~~~~~l~-~~Gv~~~~~~-----~~~~iri~~~~~~t~e~i~~~l~~l~~~ 442 (451)
|+.+. .+..+++..|+ ++||.+.|+. ..+.+|++++. .+++++++++++|.++
T Consensus 323 ~~~~~~~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~-~~~~~~~~~~~~l~~~ 384 (386)
T PRK07550 323 YVRHPFPDRPSREVARRLAKEAGILCLPGTMFGPGQEGYLRLAFAN-ADVAGIGELVERLRAF 384 (386)
T ss_pred EecCCCCCCCHHHHHHHHHHhcCEEEeCchhhCCCCCCEEEEEeec-CCHHHHHHHHHHHHhh
Confidence 87763 35788998876 5799999863 13679998753 4789999999999764
No 161
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.92 E-value=9.3e-23 Score=201.69 Aligned_cols=316 Identities=16% Similarity=0.093 Sum_probs=202.9
Q ss_pred EEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccCC-CCCHHHHHHHHHHhhccC----CC-eEEecCCHHHHHHHHH
Q 013008 99 EYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNM-YYSIPQIELAKRLVACSF----AD-RVFFSNTGTEANEAAI 172 (451)
Q Consensus 99 ~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~-~~~~~~~~l~~~l~~~~~----~e-~v~~~~sG~eA~~~al 172 (451)
+.+||.++.. .++ .+|++.+++++.......+... +....+..+++++.+..+ .+ +|++|+|+++|+..++
T Consensus 1 ~~~~~~~g~p--~~~-~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~ai~~~~ 77 (350)
T TIGR03537 1 RLFDFGTGDP--KEP-TPPFIRKALIDAVPEVSQYPSALGTKALREAISGWFERRFGVKLDPDAQVLPSAGSKEAIFHFP 77 (350)
T ss_pred CeEeccCCCC--CCC-CCHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHH
Confidence 3578888865 344 4788999998876542211111 122335666666655544 55 8999999999999888
Q ss_pred HHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCC--CCeeEeeCCCHHHHHHhcCCCCeEEE
Q 013008 173 KFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVM--PGVNFVEYGNIEATRKLIQPGKTAAV 250 (451)
Q Consensus 173 ~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~le~~l~~~~~aav 250 (451)
.++... + ++++.|++.+|+|.++...+...+.... . .+.. .+.. -|++++++++.+ +++++
T Consensus 78 ~~~~~~----g----~~~d~Vl~~~p~y~~~~~~~~~~g~~~~-~---v~~~~~~~~~----~d~~~l~~~~~~-~~~~i 140 (350)
T TIGR03537 78 LVFIDP----E----EDRRRVIFGTPGYPVYERGALFAGGEPT-A---VKLKKEDGFL----LRLEKVEKSILE-ETKIV 140 (350)
T ss_pred HHHcCC----C----CCCceEEEcCCCCcchHHHHHhcCCEEE-E---cccCcccCCc----cCHHHHHHhhhh-ccEEE
Confidence 755410 0 0237999999999988766544332211 1 1111 1111 178999998865 45566
Q ss_pred EEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccccccC--CCcceeeeccccc-CCccccccc
Q 013008 251 FVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYG--IFPDIMTLAKPLA-GGLPIGAAL 327 (451)
Q Consensus 251 i~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~--~~pdi~t~sK~lg-~G~~iG~v~ 327 (451)
++.+.++++| ...+.+.+++|.++|++||+++|+||+|..+...+........+ ...-+.+|||.++ .|+|+||++
T Consensus 141 ~i~~p~NPtG-~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~GlRiG~~~ 219 (350)
T TIGR03537 141 WINYPHNPTG-ATAPRSYLKETIAMCREHGIILCSDECYTEIYFGEPPHSALEVGIENVLAFHSLSKRSGMTGYRSGFVA 219 (350)
T ss_pred EEeCCCCCcC-cccCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCchhhcCcCCEEEEeecccccCCccccceeee
Confidence 6655455555 46799999999999999999999999997652222221111111 1122337899997 589999999
Q ss_pred ccHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH--------------HHhCCCCcceeccc-ceeEEEEe
Q 013008 328 VTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS--------------KLARNPHVKDVRGL-GLIIGIEF 392 (451)
Q Consensus 328 ~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~--------------~~~~~~~~~~v~g~-G~~~~~~~ 392 (451)
+++++++.+.......+.+.+++.+.++.+++. .+++.++ .++.+. +....+. |+++|+.+
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~---~~~~~~~~r~~l~~~~~~~~~~l~~~g-~~~~~~~g~~~~~~~~ 295 (350)
T TIGR03537 220 GDEKLISFLRKLRANFGVASPDFVQAAAKAAWS---DDNHVLERRKIFKRKRDLFIEFFNKVG-LEYLYPDATFYLWVKV 295 (350)
T ss_pred cCHHHHHHHHHHHHhhccCCCHHHHHHHHHHhC---CcHHHHHHHHHHHHHHHHHHHHHHHCC-CcccCCCeEEEEEEEC
Confidence 999988887644333445556677777766664 2222222 122222 2223333 66678887
Q ss_pred c--CChHHHHHHHHHCCceeeecCC-----CCEEEEeCCCCCCHHHHHHHHHHHHH
Q 013008 393 D--VSATPVVDACRDSGLLVLTAGK-----GNVVRLVPPLIISEQELDQAVEILCK 441 (451)
Q Consensus 393 ~--~~~~~~~~~l~~~Gv~~~~~~~-----~~~iri~~~~~~t~e~i~~~l~~l~~ 441 (451)
. ....++++.|.++||.+.|+.. .+.+|++. ..+++++++++++|++
T Consensus 296 ~~~~~~~~l~~~L~~~gv~v~~g~~f~~~~~~~~Ri~~--~~~~~~~~~~l~~~~~ 349 (350)
T TIGR03537 296 PSGIDAKDYALRLLENGIVVAPGENFGSGEEGYVRVAL--VPTLEECEEALRLWER 349 (350)
T ss_pred CCCCCHHHHHHHHHHCCEEEcCchhhCCCCCCEEEEEe--cCCHHHHHHHHHHHhc
Confidence 4 3578899999999999987531 36788865 4688999999998875
No 162
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.92 E-value=9.8e-23 Score=204.75 Aligned_cols=319 Identities=13% Similarity=0.101 Sum_probs=202.3
Q ss_pred CCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcc-cccC--CCCCHHHHHHHHHHhhccC----CC-eEEecCCHHHHH
Q 013008 97 GREYLDLSSGIAVNALGHGDADWIKAVVDQANVLT-HVSN--MYYSIPQIELAKRLVACSF----AD-RVFFSNTGTEAN 168 (451)
Q Consensus 97 G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~-~~~~--~~~~~~~~~l~~~l~~~~~----~e-~v~~~~sG~eA~ 168 (451)
|+.++||..+.. .+..++++.+++.+.+.... ..+. .+....+.++++++.+.++ .+ .+++|+|+++|+
T Consensus 34 g~~~i~l~~g~p---~~~~p~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~i~vt~G~~~al 110 (394)
T PRK05942 34 GLDLIDLGMGNP---DGAAPQPVIEAAIAALADPQNHGYPPFEGTASFRQAITDWYHRRYGVELDPDSEALPLLGSKEGL 110 (394)
T ss_pred CCCeEEcCCCCC---CCCCCHHHHHHHHHHHhCCCCccCCCCCCCHHHHHHHHHHHHHHHCCCcCCCCeEEEccChHHHH
Confidence 556789987754 33356678888777664321 1111 1122335666666655433 55 588999999999
Q ss_pred HHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeE
Q 013008 169 EAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTA 248 (451)
Q Consensus 169 ~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a 248 (451)
..+++++. +++|+|++.+|+|.++.......+. .... .+...+..+ .-|++++++.+.+ +++
T Consensus 111 ~~~~~~~~-----------~~gd~Vlv~~P~y~~~~~~~~~~g~-~~~~---v~~~~~~~~--~~d~~~l~~~~~~-~~k 172 (394)
T PRK05942 111 THLALAYV-----------NPGDVVLVPSPAYPAHFRGPLIAGA-QIYP---IILKPENDW--LIDLSSIPEEVAQ-QAK 172 (394)
T ss_pred HHHHHHhC-----------CCCCEEEEcCCCCcchHHHHHHcCC-EEEE---eecCCccCC--ccCHHHHHHhccc-cce
Confidence 99988654 2689999999999887544332221 1100 111111000 0278999888864 556
Q ss_pred EEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCccccc-cc---cc-ccCCCcceeeeccccc-CCcc
Q 013008 249 AVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYL-WA---HE-HYGIFPDIMTLAKPLA-GGLP 322 (451)
Q Consensus 249 avi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~-~~---~~-~~~~~pdi~t~sK~lg-~G~~ 322 (451)
+|++...++++| ..++.+.+++|.++|++||+++|+||+|..|...+.. .. .. ..+....+.+|||.++ +|+|
T Consensus 173 ~i~l~~P~NPtG-~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~~GlR 251 (394)
T PRK05942 173 ILYFNYPSNPTT-ATAPREFFEEIVAFARKYEIMLVHDLCYAELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAGWR 251 (394)
T ss_pred EEEEcCCCCCCC-CcCCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCCChhhCCCccccEEEEecchhccCChhhh
Confidence 666553344555 4679999999999999999999999999876443321 11 11 1122344568999997 6999
Q ss_pred cccccccHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH--------------HHhCCCCcceecc-ccee
Q 013008 323 IGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS--------------KLARNPHVKDVRG-LGLI 387 (451)
Q Consensus 323 iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~--------------~~~~~~~~~~v~g-~G~~ 387 (451)
+||+++++++++.+........++.+.+++.++.++|+.. +.+.++ .++.++ +....+ .|++
T Consensus 252 iG~i~~~~~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~L~~~~-~~~~~~~~~~f 328 (394)
T PRK05942 252 VGFVVGNRHIIQGLRTLKTNLDYGIFSALQKAAETALQLP--DSYLQQVQERYRTRRDFLIQGLGELG-WNIPPTKATMY 328 (394)
T ss_pred eeeeecCHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCc--HHHHHHHHHHHHHHHHHHHHHHHHCC-CeecCCCeeeE
Confidence 9999999999998865433345666778888888888632 222211 122222 222333 4567
Q ss_pred EEEEec--CChHHHHHHHH-HCCceeeecCC-----CCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 013008 388 IGIEFD--VSATPVVDACR-DSGLLVLTAGK-----GNVVRLVPPLIISEQELDQAVEILCKT 442 (451)
Q Consensus 388 ~~~~~~--~~~~~~~~~l~-~~Gv~~~~~~~-----~~~iri~~~~~~t~e~i~~~l~~l~~~ 442 (451)
+|+.+. .+..++..+++ ++||.+.|+.. .+++|++++ .+.+.+.+++++|.++
T Consensus 329 ~~~~~~~~~~~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~--~~~~~l~~~l~~l~~~ 389 (394)
T PRK05942 329 LWVPCPVGMGSTDFALNVLQKTGVVVTPGNAFGEGGEGYVRISLI--ADCDRLGEALDRLKQA 389 (394)
T ss_pred EEEECCCCCCHHHHHHHHHHHCCEEEeCChhhCcCCCCeEEEEec--CCHHHHHHHHHHHHHh
Confidence 888874 34567777655 68999987531 368899764 4567777777777653
No 163
>PRK08912 hypothetical protein; Provisional
Probab=99.92 E-value=8.4e-23 Score=204.82 Aligned_cols=319 Identities=18% Similarity=0.143 Sum_probs=205.0
Q ss_pred EEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccC--CCCCHHHHHHHHHHhhccC----CC-eEEecCCHHHHHHHH
Q 013008 99 EYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSN--MYYSIPQIELAKRLVACSF----AD-RVFFSNTGTEANEAA 171 (451)
Q Consensus 99 ~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~--~~~~~~~~~l~~~l~~~~~----~e-~v~~~~sG~eA~~~a 171 (451)
..+||..|... ++ .+|.+.+++.+.+......+. .+....+..+++++.+.++ .+ +|++|+|+++|+..+
T Consensus 27 ~~i~l~~g~p~--~~-~p~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~ 103 (387)
T PRK08912 27 GAINLGQGFPD--DP-GPEDVRRAAADALLDGSNQYPPMMGLPELRQAVAAHYARFQGLDLDPETEVMVTSGATEALAAA 103 (387)
T ss_pred CeEEccCCCCC--CC-CCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcccEEEeCCcHHHHHHH
Confidence 56889888763 33 467888888877654211111 1122335666666655443 55 899999999999988
Q ss_pred HHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEE
Q 013008 172 IKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVF 251 (451)
Q Consensus 172 l~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi 251 (451)
++... .+++.|++.+|+|.++.......+.... . .+..+... .-|++++++.+.++...+++
T Consensus 104 ~~~~~-----------~~gd~Vlv~~p~y~~~~~~~~~~g~~~~-~---~~~~~~~~---~~~~~~l~~~~~~~~~~v~l 165 (387)
T PRK08912 104 LLALV-----------EPGDEVVLFQPLYDAYLPLIRRAGGVPR-L---VRLEPPHW---RLPRAALAAAFSPRTKAVLL 165 (387)
T ss_pred HHHhc-----------CCCCEEEEeCCCchhhHHHHHHcCCEEE-E---EecCcccC---cCCHHHHHHHhCccceEEEE
Confidence 88654 1688999999999887654432221111 0 11111000 01789999988653334444
Q ss_pred EccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccc-c-ccccCC---Ccceeeeccccc-CCccccc
Q 013008 252 VEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLW-A-HEHYGI---FPDIMTLAKPLA-GGLPIGA 325 (451)
Q Consensus 252 ~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~-~-~~~~~~---~pdi~t~sK~lg-~G~~iG~ 325 (451)
+.| ++++| ...+.+.+++|.++|++|++++|+||+|..+-..+..+ . ....+. ..-+.+|||.++ .|+|+||
T Consensus 166 ~~p-~NPtG-~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~ 243 (387)
T PRK08912 166 NNP-LNPAG-KVFPREELALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPGMRERTVKIGSAGKIFSLTGWKVGF 243 (387)
T ss_pred eCC-CCCcC-cccCHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCCCCcChhhCCCccCceEEEeechhhccCcCceeEE
Confidence 545 44445 45788999999999999999999999998764333211 1 111122 223347899999 7999999
Q ss_pred ccccHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH--------------HHhCCCCcceeccc-ceeEEE
Q 013008 326 ALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS--------------KLARNPHVKDVRGL-GLIIGI 390 (451)
Q Consensus 326 v~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~--------------~~~~~~~~~~v~g~-G~~~~~ 390 (451)
+++++++++.+.......+++.++..+.++.++|. ..+++.++ .++.+. +....+. |+++|+
T Consensus 244 ~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~--~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~g~~~l~~ 320 (387)
T PRK08912 244 VCAAPPLLRVLAKAHQFLTFTTPPNLQAAVAYGLG--KPDDYFEGMRADLARSRDRLAAGLRRIG-FPVLPSQGTYFLTV 320 (387)
T ss_pred EecCHHHHHHHHHHHhhccccCChHHHHHHHHHHh--CCHHHHHHHHHHHHHHHHHHHHHHHhCC-CcccCCCcceEEEe
Confidence 99999999887544333456677777777777774 22333222 222232 2223333 567777
Q ss_pred Eec-----CChHHHHHHHH-HCCceeeecCC-------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 013008 391 EFD-----VSATPVVDACR-DSGLLVLTAGK-------GNVVRLVPPLIISEQELDQAVEILCKTLPV 445 (451)
Q Consensus 391 ~~~-----~~~~~~~~~l~-~~Gv~~~~~~~-------~~~iri~~~~~~t~e~i~~~l~~l~~~l~~ 445 (451)
.+. .+..++++.|+ ++||.+.|+.. .+++|++.. .+++++++++++|.+++++
T Consensus 321 ~l~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~iRl~~~--~~~~~l~~~l~rl~~~l~~ 386 (387)
T PRK08912 321 DLAPLGLAEDDVAFCRRLVEEAGVAAIPVSAFYEEDPVTSVVRFCFA--KRDATLDEAVERLAAARRR 386 (387)
T ss_pred cccccCCCCCHHHHHHHHHhcCCEEEecchhhCCCCCCCCEEEEEEe--CCHHHHHHHHHHHHHHHhc
Confidence 773 24667898886 57999988531 257888655 5789999999999988763
No 164
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.92 E-value=4.1e-23 Score=203.97 Aligned_cols=304 Identities=21% Similarity=0.251 Sum_probs=203.8
Q ss_pred CEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHhhccC--CCeEEecCCHHHHHHHHHHHH
Q 013008 98 REYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSF--ADRVFFSNTGTEANEAAIKFA 175 (451)
Q Consensus 98 ~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~e~v~~~~sG~eA~~~al~~a 175 (451)
.++|||.+|.. .++ .+|++++++.+++..... +......++.+.++++++ .+++++++|+++++..+++.+
T Consensus 19 ~~~i~l~~~~~--~~~-~~~~~~~a~~~~~~~~~~----y~~~~~~~lr~~ia~~~~~~~~~i~~~~G~~~~l~~~~~~l 91 (346)
T TIGR01141 19 KEVIKLNSNEN--PFG-PPPKAKEALRAEADKLHR----YPDPDPAELKQALADYYGVDPEQILLGNGSDEIIELLIRAF 91 (346)
T ss_pred CceEEccCCCC--CCC-CCHHHHHHHHHhHHHhhc----CCCCCHHHHHHHHHHHhCcChHHEEEcCCHHHHHHHHHHHh
Confidence 47999998876 455 578999999988754322 122223678888888876 678999999999998888765
Q ss_pred HHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEccc
Q 013008 176 RKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPI 255 (451)
Q Consensus 176 ~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~ 255 (451)
. .++++|++.+|+|..+....... +..... .+...+ ...|++.+++.+.+ ++++|+++..
T Consensus 92 ~-----------~~gd~v~~~~p~y~~~~~~~~~~-g~~~~~---~~~~~~----~~~d~~~l~~~~~~-~~~~v~l~~p 151 (346)
T TIGR01141 92 L-----------EPGDAVLVPPPTYSMYEISAKIH-GAEVVK---VPLDED----GQLDLEDILVAIDD-KPKLVFLCSP 151 (346)
T ss_pred c-----------CCCCEEEEcCCCHHHHHHHHHHc-CCeEEE---eccCCC----CCCCHHHHHHhcCC-CCCEEEEeCC
Confidence 4 15789999999986543222211 211111 111111 01388999988754 4666666655
Q ss_pred cCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccccccCCCccee---eeccccc-CCcccccccccHH
Q 013008 256 QGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIM---TLAKPLA-GGLPIGAALVTEK 331 (451)
Q Consensus 256 ~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~---t~sK~lg-~G~~iG~v~~~~~ 331 (451)
++++|.. ++.+.++++++.|+ +|+++|+||+|.++...+... ......++++ ++||.++ +|+|+||++++++
T Consensus 152 ~NptG~~-~~~~~~~~l~~~~~-~~~~ii~D~~y~~~~~~~~~~--~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~ 227 (346)
T TIGR01141 152 NNPTGNL-LSRSDIEAVLERTP-EDALVVVDEAYGEFSGEPSTL--PLLAEYPNLIVLRTLSKAFGLAGLRIGYAIANAE 227 (346)
T ss_pred CCCCCCC-CCHHHHHHHHHhCC-CCcEEEEECchhhhcCCccHH--HHHhhCCCEEEEehhhHhhhchhhhceeeecCHH
Confidence 6666764 56666666666665 699999999998774322211 1111223433 7899996 5899999999999
Q ss_pred HHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH--------------HHhCCCCcceecccceeEEEEecCChH
Q 013008 332 VASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS--------------KLARNPHVKDVRGLGLIIGIEFDVSAT 397 (451)
Q Consensus 332 i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~--------------~~~~~~~~~~v~g~G~~~~~~~~~~~~ 397 (451)
+.+.+... ..+++.+++++.++.++++.. ++.++ .+++++.+....+.|.++++++...+.
T Consensus 228 ~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~g~~~~~~~~~~~~ 302 (346)
T TIGR01141 228 IIDALNKV--RAPFNLSRLAQAAAIAALRDD---DFIEKTVEEINAERERLYDGLKKLPGLEVYPSDANFVLIRFPRDAD 302 (346)
T ss_pred HHHHHHhc--cCCCCCCHHHHHHHHHHhCCH---HHHHHHHHHHHHHHHHHHHHHHhcCCCEECCCcCCEEEEecCCCHH
Confidence 99888643 235667888998888777532 11211 223344444345568888888754678
Q ss_pred HHHHHHHHCCceeeecCC----CCEEEEeCCCCCCHHHHHHHHHHHH
Q 013008 398 PVVDACRDSGLLVLTAGK----GNVVRLVPPLIISEQELDQAVEILC 440 (451)
Q Consensus 398 ~~~~~l~~~Gv~~~~~~~----~~~iri~~~~~~t~e~i~~~l~~l~ 440 (451)
++.+.|.++||.+.++.. .+.+|++++ ++++++++++.|+
T Consensus 303 ~~~~~L~~~gI~v~~g~~f~~~~~~iRls~~---~~~~i~~~~~~l~ 346 (346)
T TIGR01141 303 ALFEALLEKGIIVRDLNSYPGLPNCLRITVG---TREENDRFLAALR 346 (346)
T ss_pred HHHHHHHHCCeEEEeCCCcCCCCCeEEEecC---CHHHHHHHHHHhC
Confidence 899999999999998642 367899754 7899999988763
No 165
>PRK05839 hypothetical protein; Provisional
Probab=99.92 E-value=6e-23 Score=204.71 Aligned_cols=318 Identities=13% Similarity=0.033 Sum_probs=202.1
Q ss_pred CCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccCC-CCCHHHHHHHHHHhhccC----CCeEEecCCHHHHHHH
Q 013008 96 EGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNM-YYSIPQIELAKRLVACSF----ADRVFFSNTGTEANEA 170 (451)
Q Consensus 96 ~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~-~~~~~~~~l~~~l~~~~~----~e~v~~~~sG~eA~~~ 170 (451)
.|+.++||..|..+ ++ .++.+.+++.+.......++.. +....++.+++.+.+.++ .++|++|+|+++|+..
T Consensus 22 ~~~~~i~l~~~~p~--~~-~~~~~~~a~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~g~~~~~~~I~it~G~~~al~~ 98 (374)
T PRK05839 22 KEYKGLDLTIGEPQ--FE-TPKFIQDALKNNAHLLNKYPKSAGEESLREAQRGFFKRRFKIELKENELIPTFGTREVLFN 98 (374)
T ss_pred CCCCeEEcCCCCCC--CC-CCHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHH
Confidence 38899999998763 55 3678888888765442222111 223446677777777644 7899999999999988
Q ss_pred HHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEE
Q 013008 171 AIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAV 250 (451)
Q Consensus 171 al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aav 250 (451)
+++++.. . .+++.|++.+|+|..+.......+. .... .+...+..+. .|++.. .++ ++++|
T Consensus 99 ~~~~~~~-~--------~~gd~vlv~~P~y~~~~~~~~~~g~-~v~~---v~~~~~~~~~--~d~~~~--~~~--~~k~v 159 (374)
T PRK05839 99 FPQFVLF-D--------KQNPTIAYPNPFYQIYEGAAIASRA-KVLL---MPLTKENDFT--PSLNEK--ELQ--EVDLV 159 (374)
T ss_pred HHHHHhc-C--------CCCCEEEECCCCchhhHHHHHhcCC-EEEE---eecccccCCc--CCcchh--hhc--cccEE
Confidence 8876531 0 1478899999999887655433221 1111 1111110000 022222 222 34454
Q ss_pred EEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccc-c--------ccCCCcceeeeccccc-CC
Q 013008 251 FVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAH-E--------HYGIFPDIMTLAKPLA-GG 320 (451)
Q Consensus 251 i~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~-~--------~~~~~pdi~t~sK~lg-~G 320 (451)
++...++++|. ..+.+.+++|.++|++||++||+||+|..|...+..... . .++...-+.+|||.++ +|
T Consensus 160 ~i~nP~NPTG~-~~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~G 238 (374)
T PRK05839 160 ILNSPNNPTGR-TLSLEELIEWVKLALKHDFILINDECYSEIYENTPPPSLLEASILVGNESFKNVLVINSISKRSSAPG 238 (374)
T ss_pred EEeCCCCCcCc-ccCHHHHHHHHHHHHHcCCEEEeccchhhcccCCCCCCHhhhhcccCccccCcEEEEeccccccCCcc
Confidence 44433444454 578999999999999999999999999887322221111 1 0111222447999986 69
Q ss_pred cccccccccHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH-----------HHhCCCCcceecccceeEE
Q 013008 321 LPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS-----------KLARNPHVKDVRGLGLIIG 389 (451)
Q Consensus 321 ~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~-----------~~~~~~~~~~v~g~G~~~~ 389 (451)
+|+||+++++++++.+........++.+.+.+.++.+++. .+++.++ +.+.++ +. ....|+++|
T Consensus 239 lRiG~ii~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~l~-~~-~p~gg~fi~ 313 (374)
T PRK05839 239 LRSGFIAGDASILKKYKAYRTYLGCASPLPLQKAAAVAWL---DDEHAEFFRNIYAKNLKLAREILG-IT-IPPATFYVW 313 (374)
T ss_pred ceeEEEecCHHHHHHHHHHHhhcCCCCChHHHHHHHHHhc---cchHHHHHHHHHHHHHHHHHHhcC-CC-CCCeeEEEE
Confidence 9999999999999887543333345567777877776663 2333322 112221 11 345588888
Q ss_pred EEecCChHHHHHHHHH-CCceeeecCC-------CCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q 013008 390 IEFDVSATPVVDACRD-SGLLVLTAGK-------GNVVRLVPPLIISEQELDQAVEILCKTLP 444 (451)
Q Consensus 390 ~~~~~~~~~~~~~l~~-~Gv~~~~~~~-------~~~iri~~~~~~t~e~i~~~l~~l~~~l~ 444 (451)
+.+. +..+++++|++ +||.+.|+.. .+++|++. ..+++++.+++++|.++++
T Consensus 314 ~~~~-~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~~~iRis~--~~~~~~~~~~l~~l~~~l~ 373 (374)
T PRK05839 314 LPVD-NDEEFTKKLYQNEGIKVLPGSFLGRNGIGKGYVRIAL--VYDTPKLEKALEIIKTYLE 373 (374)
T ss_pred EeCC-ChHHHHHHHHHHCCEEEeCchhhCCCCCCCCeEEEEe--cCCHHHHHHHHHHHHHHhh
Confidence 8875 45778889875 8999998521 26788865 4579999999999998874
No 166
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.92 E-value=6.9e-23 Score=203.13 Aligned_cols=312 Identities=18% Similarity=0.147 Sum_probs=205.1
Q ss_pred CCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHhhccC--C-CeEEecCCHHHHHHHHHH
Q 013008 97 GREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSF--A-DRVFFSNTGTEANEAAIK 173 (451)
Q Consensus 97 G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~-e~v~~~~sG~eA~~~al~ 173 (451)
++.++|+..|.. +++ .+|++++++.+.+..... ..|+.....+|.+.++++++ . +.|++++|+++++..+++
T Consensus 25 ~~~~i~l~~~~~--~~~-~~~~~~~~~~~~~~~~~~--~~Y~~~~~~~lr~~ia~~~~~~~~~~I~~t~G~~~~i~~~~~ 99 (356)
T PRK04870 25 ATGMVKLDAMEN--PYR-LPAELRAELGERLAEVAL--NRYPDPRAAALKAALRAAMGVPAGADVLLGNGSDELIQLLAL 99 (356)
T ss_pred CCCceeCcCCCC--CCC-CCHHHHHHHHHHhhcccc--ccCCCCCHHHHHHHHHHHhCcCCCCcEEEcCCHHHHHHHHHH
Confidence 467888877754 454 678999999988764221 11222235678888888876 2 479999999999999888
Q ss_pred HHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEc
Q 013008 174 FARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVE 253 (451)
Q Consensus 174 ~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~e 253 (451)
++. ++++.|++.+|+|.++...+...+ ..... .+..++.. .|++++++.+...++++|++.
T Consensus 100 ~~~-----------~~gd~vlv~~P~y~~~~~~~~~~g-~~~~~---i~~~~~~~----~d~~~l~~~~~~~~~~~v~l~ 160 (356)
T PRK04870 100 ACA-----------KPGATVLAPEPGFVMYRMSAKLAG-LEFVG---VPLTADFT----LDLPAMLAAIAEHRPALVFLA 160 (356)
T ss_pred Hhc-----------CCCCEEEECCCCHHHHHHHHHHcC-CEEEE---ecCCCCCC----CCHHHHHHHhhcCCCCEEEEc
Confidence 664 268999999999987654433222 21111 11111111 278999999865456666555
Q ss_pred cccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccccccCCCcceeeeccccc-CCcccccccccHHH
Q 013008 254 PIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLA-GGLPIGAALVTEKV 332 (451)
Q Consensus 254 p~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~t~sK~lg-~G~~iG~v~~~~~i 332 (451)
..++++|. +++.+.+++|.++| ++++|+||+|..|...........++...-+.+||| ++ .|+|+||+++++++
T Consensus 161 ~p~NPtG~-~~~~~~~~~i~~~~---~~~ii~De~y~~~~~~~~~~~~~~~~~vi~~~S~SK-~~~~GlRiG~~i~~~~~ 235 (356)
T PRK04870 161 YPNNPTGN-LFDDADVERIIEAA---PGLVVVDEAYQPFAGDSWLPRLARFPNLLVMRTVSK-LGLAGLRLGYLAGHPAW 235 (356)
T ss_pred CCCCCCCC-CCCHHHHHHHHHHC---CCEEEEECCchhhcCcchHHHHhhCCCEEEEecchh-hhhHHHhhhhhhCCHHH
Confidence 44455554 56888888888888 789999999987743211101111222223447999 66 48999999999999
Q ss_pred HhhccCCCccCCCCCcHHHHHHHHHHHHHhcC-hHHHHH----------HHhCCCCcceecccceeEEEEecCChHHHHH
Q 013008 333 ASAINYGDHGSTFAGSPLVCNAAIAVLDKISN-PAFLAS----------KLARNPHVKDVRGLGLIIGIEFDVSATPVVD 401 (451)
Q Consensus 333 ~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~----------~~~~~~~~~~v~g~G~~~~~~~~~~~~~~~~ 401 (451)
++.+.... ..++.+.+++.++..+++..+. ++..++ .+++++.+...+..|.++++.++ ...++.+
T Consensus 236 i~~~~~~~--~~~~~~~~~q~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 312 (356)
T PRK04870 236 IAELDKVR--PPYNVNVLTQATALFALEHVDVLDAQAAQLRAERTRLAAALAALPGVTVFPSAANFILVRVP-DAAAVFD 312 (356)
T ss_pred HHHHHHcc--CCCcCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCcEECCCCCeEEEEECC-CHHHHHH
Confidence 98876432 3456778888887777752110 011111 23445444444566788888875 5678889
Q ss_pred HHHHCCceeeecCC-----CCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 013008 402 ACRDSGLLVLTAGK-----GNVVRLVPPLIISEQELDQAVEILCKTL 443 (451)
Q Consensus 402 ~l~~~Gv~~~~~~~-----~~~iri~~~~~~t~e~i~~~l~~l~~~l 443 (451)
.|.++||.+.++.. .+.+|+++. +.+++++++++|++++
T Consensus 313 ~l~~~gI~v~~~~~f~~~~~~~iRis~~---~~~~~~~l~~al~~~~ 356 (356)
T PRK04870 313 GLKTRGVLVKNLSGMHPLLANCLRVTVG---TPEENAQFLAALKAAL 356 (356)
T ss_pred HHHHCCEEEEECCCCCCCCCCeEEEeCC---CHHHHHHHHHHHHHhC
Confidence 99999999987631 357888654 7888999999988753
No 167
>PRK07683 aminotransferase A; Validated
Probab=99.92 E-value=1.7e-22 Score=202.40 Aligned_cols=319 Identities=17% Similarity=0.093 Sum_probs=203.6
Q ss_pred CEEEeeccCcccccCCCCCHHHHHHHHHHHhhccccc--CCCCCHHHHHHHHHHhhccC----CC-eEEecCCHHHHHHH
Q 013008 98 REYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVS--NMYYSIPQIELAKRLVACSF----AD-RVFFSNTGTEANEA 170 (451)
Q Consensus 98 ~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~--~~~~~~~~~~l~~~l~~~~~----~e-~v~~~~sG~eA~~~ 170 (451)
..++||..+.+. ++ .++.+.+++.+.++.....+ ..+....+.++++++.+..+ .+ +|++|+|+++|+..
T Consensus 28 ~~~i~l~~~~p~--~~-~~~~~~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~~I~~t~G~~~al~~ 104 (387)
T PRK07683 28 DNLISLTIGQPD--FP-TPSHVKEAAKRAITENYTSYTHNAGLLELRKAACNFVKDKYDLHYSPESEIIVTIGASEAIDI 104 (387)
T ss_pred CCeEEecCCCCC--CC-CCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHH
Confidence 457888887642 32 46788999999887532211 12223335566666654433 55 89999999999999
Q ss_pred HHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCC-CeeEeeCCCHHHHHHhcCCCCeEE
Q 013008 171 AIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMP-GVNFVEYGNIEATRKLIQPGKTAA 249 (451)
Q Consensus 171 al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~le~~l~~~~~aa 249 (451)
+++.+. .+++.|++.+|+|+++.......+.... +.+... +.. -|.+.+++.+.+. +++
T Consensus 105 ~~~~l~-----------~~gd~Vl~~~p~y~~~~~~~~~~g~~~~----~~~~~~~~~~----~~~~~l~~~~~~~-~~~ 164 (387)
T PRK07683 105 AFRTIL-----------EPGTEVILPAPIYPGYEPIIRLCGAKPV----FIDTRSTGFR----LTAEALENAITEK-TRC 164 (387)
T ss_pred HHHHhC-----------CCCCEEEEcCCCccchHHHHHHcCCEEE----EeecCcccCC----CCHHHHHHhcCcC-ceE
Confidence 988654 1588999999999987655433322111 011111 111 1678898888653 444
Q ss_pred EEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCccccccccccc-CC---Ccceeeeccccc-CCcccc
Q 013008 250 VFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHY-GI---FPDIMTLAKPLA-GGLPIG 324 (451)
Q Consensus 250 vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~-~~---~pdi~t~sK~lg-~G~~iG 324 (451)
+++...++++|. .++.+.+++|.++|+++|+++|+||+|..+...+.......+ +. ..-+.+|||.++ .|+|+|
T Consensus 165 i~i~~p~NPtG~-~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~pGlRiG 243 (387)
T PRK07683 165 VVLPYPSNPTGV-TLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQPHTSIAHFPEMREKTIVINGLSKSHSMTGWRIG 243 (387)
T ss_pred EEEeCCCCCCCc-CCCHHHHHHHHHHHHHcCeEEEEecccccceeCCCcCChhhccCCcCCeEEEeeccccccCccceeE
Confidence 554434445554 579999999999999999999999999877433322111111 21 222447999999 799999
Q ss_pred cccccHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH--------------HHhCCCCcceeccc-ceeEE
Q 013008 325 AALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS--------------KLARNPHVKDVRGL-GLIIG 389 (451)
Q Consensus 325 ~v~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~--------------~~~~~~~~~~v~g~-G~~~~ 389 (451)
|+++++++++.+.........+.+.+++.++.+.|+.. +.+.++ .++... +....+. |+++|
T Consensus 244 ~i~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~ 320 (387)
T PRK07683 244 FLFAPSYLAKHILKVHQYNVTCASSISQYAALEALTAG--KDDAKMMRHQYKKRRDYVYNRLISMG-LDVEKPTGAFYLF 320 (387)
T ss_pred EEEcCHHHHHHHHHHHHhccCCCChHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHHHcC-CcccCCCeeEEEE
Confidence 99999998888754322223345677888888777531 122211 222222 2223343 55666
Q ss_pred EEec---CChHHHHHHH-HHCCceeeecCC-----CCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 013008 390 IEFD---VSATPVVDAC-RDSGLLVLTAGK-----GNVVRLVPPLIISEQELDQAVEILCKTLPV 445 (451)
Q Consensus 390 ~~~~---~~~~~~~~~l-~~~Gv~~~~~~~-----~~~iri~~~~~~t~e~i~~~l~~l~~~l~~ 445 (451)
..+. ....+++..+ .++||.+.|+.. .+.+||+.. .+++++.+++++|.+++++
T Consensus 321 ~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~Ri~~~--~~~~~~~~al~~l~~~l~~ 383 (387)
T PRK07683 321 PSIGHFTMSSFDFALDLVEEAGLAVVPGSAFSEYGEGYVRLSYA--YSIETLKEGLDRLEAFLQQ 383 (387)
T ss_pred EecccCCCCHHHHHHHHHHhCCEEEcCchhhCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHh
Confidence 6553 2455677665 567999988631 367888654 5899999999999998865
No 168
>PRK07337 aminotransferase; Validated
Probab=99.92 E-value=1.6e-22 Score=202.81 Aligned_cols=321 Identities=15% Similarity=0.129 Sum_probs=206.3
Q ss_pred CCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccC--CCCCHHHHHHHHHHhhccC----CCeEEecCCHHHHHHH
Q 013008 97 GREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSN--MYYSIPQIELAKRLVACSF----ADRVFFSNTGTEANEA 170 (451)
Q Consensus 97 G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~--~~~~~~~~~l~~~l~~~~~----~e~v~~~~sG~eA~~~ 170 (451)
|..++||..+... ++ .+|.+.+++.+.+......+. .+....+..+++++.+.++ .+++++|+|+++|+..
T Consensus 29 ~~~~i~l~~~~~~--~~-~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~al~~ 105 (388)
T PRK07337 29 GRDIIHMGIGEPD--FT-APEPVVEAAARALRRGVTQYTSALGLAPLREAIAAWYARRFGLDVAPERIVVTAGASAALLL 105 (388)
T ss_pred CCCEEEeCCcCCC--CC-CCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCChHhEEEecCcHHHHHH
Confidence 3456788777652 32 468889999887754221111 1122335566666654433 6789999999999999
Q ss_pred HHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEE
Q 013008 171 AIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAV 250 (451)
Q Consensus 171 al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aav 250 (451)
++.+.. .++|.|++.+|+|.+........+.... . .+......+ --|++++++.+.++...++
T Consensus 106 ~~~~l~-----------~~gd~Vlv~~p~y~~~~~~~~~~g~~~~-~---~~~~~~~~~--~~~~~~l~~~~~~~~~~v~ 168 (388)
T PRK07337 106 ACLALV-----------ERGDEVLMPDPSYPCNRHFVAAAEGRPV-L---VPSGPAERF--QLTAADVEAAWGERTRGVL 168 (388)
T ss_pred HHHHhc-----------CCCCEEEEeCCCchhhHHHHHHcCCEEE-E---eecCCccCC--cCCHHHHHhhcCccceEEE
Confidence 888654 1689999999999877544332222111 1 111111000 0278999998876455556
Q ss_pred EEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccccccCCCcce---eeeccccc-CCcccccc
Q 013008 251 FVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDI---MTLAKPLA-GGLPIGAA 326 (451)
Q Consensus 251 i~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi---~t~sK~lg-~G~~iG~v 326 (451)
++.|.+ ++| ...+.+.+++|.++|++||+++|+||+|.++...+..... ....+++ .+|||.++ .|+|+||+
T Consensus 169 l~~p~N-PtG-~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~--~~~~~~vi~~~S~SK~~~~~G~RiG~~ 244 (388)
T PRK07337 169 LASPSN-PTG-TSIAPDELRRIVEAVRARGGFTIVDEIYQGLSYDAAPVSA--LSLGDDVITINSFSKYFNMTGWRLGWL 244 (388)
T ss_pred EECCCC-CCC-cCcCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcCh--hhccCCEEEEEechhhcCCchhheeee
Confidence 666654 444 4678999999999999999999999999887554431111 1223444 37899997 69999999
Q ss_pred cccHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHH-------HHH------HHhCCCCcc-eecccceeEEEEe
Q 013008 327 LVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAF-------LAS------KLARNPHVK-DVRGLGLIIGIEF 392 (451)
Q Consensus 327 ~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~-------~~~------~~~~~~~~~-~v~g~G~~~~~~~ 392 (451)
++++++++.+.........+.+++++.++.++++.-....+ .++ .++.++... ..+..|+++|+++
T Consensus 245 ~~~~~l~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~p~~g~f~~~~~ 324 (388)
T PRK07337 245 VVPEALVGTFEKLAQNLFICASALAQHAALACFEPDTLAIYERRRAEFKRRRDFIVPALESLGFKVPVMPDGAFYVYADC 324 (388)
T ss_pred ecCHHHHHHHHHHHHHhccCCChHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCeeEEEEEec
Confidence 99999888876433333445678888888777752100111 111 223333211 1234578899988
Q ss_pred c-------CChHHHHHHHH-HCCceeeecCC------CCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 013008 393 D-------VSATPVVDACR-DSGLLVLTAGK------GNVVRLVPPLIISEQELDQAVEILCKTL 443 (451)
Q Consensus 393 ~-------~~~~~~~~~l~-~~Gv~~~~~~~------~~~iri~~~~~~t~e~i~~~l~~l~~~l 443 (451)
. .+..+++..++ ++||.+.|+.. .+++|++.. .+++++++++++|.+++
T Consensus 325 ~~~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~Ri~~~--~~~~~l~~~l~rl~~~l 387 (388)
T PRK07337 325 RGVAHPAAGDSAALTQAMLHDAGVVLVPGRDFGPHAPRDYIRLSYA--TSMSRLEEAVARLGKLF 387 (388)
T ss_pred ccccCCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCCEEEEEec--CCHHHHHHHHHHHHHHh
Confidence 4 24567887765 68999987531 257888665 47999999999998765
No 169
>PRK09082 methionine aminotransferase; Validated
Probab=99.92 E-value=2.5e-22 Score=201.28 Aligned_cols=316 Identities=17% Similarity=0.148 Sum_probs=206.9
Q ss_pred CEEEeeccCcccccCCCCCHHHHHHHHHHHhhccccc--CCCCCHHHHHHHHHHhhccC----CC-eEEecCCHHHHHHH
Q 013008 98 REYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVS--NMYYSIPQIELAKRLVACSF----AD-RVFFSNTGTEANEA 170 (451)
Q Consensus 98 ~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~--~~~~~~~~~~l~~~l~~~~~----~e-~v~~~~sG~eA~~~ 170 (451)
+.++||..|... ++ .+|.+.+++.+.++.....+ ..+....+.++++++.+.++ .+ .+++|+|+++|+..
T Consensus 30 ~~~i~l~~g~~~--~~-~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~~a~~l~~~~~~~~~~~~~i~~t~G~~~al~~ 106 (386)
T PRK09082 30 HGAINLSQGFPD--FD-GPPYLVEALAYAMAAGHNQYPPMTGVAALREAIAAKTARLYGRQYDADSEITVTAGATEALFA 106 (386)
T ss_pred CCEEEecCCCCC--CC-CCHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCHHHHHHH
Confidence 356888887652 33 47889999988776432211 11223346778888777655 23 79999999999999
Q ss_pred HHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEE
Q 013008 171 AIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAV 250 (451)
Q Consensus 171 al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aav 250 (451)
+++... .++|+|++.+|+|.++....... +..... .+..... + ..|++++++.+.+ ++++|
T Consensus 107 ~~~~~~-----------~~gd~Vli~~p~y~~~~~~~~~~-g~~~~~---~~~~~~~-~--~~d~~~l~~~~~~-~~~~v 167 (386)
T PRK09082 107 AILALV-----------RPGDEVIVFDPSYDSYAPAIELA-GGRAVR---VALQPPD-F--RVDWQRFAAAISP-RTRLI 167 (386)
T ss_pred HHHHHc-----------CCCCEEEEeCCCchhhHHHHHHc-CCEEEE---EecCccc-c--cCCHHHHHHhcCc-cceEE
Confidence 998654 26899999999998765443322 211111 1111100 0 0278999999875 45566
Q ss_pred EEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCccccc-c-cccccCCC---cceeeeccccc-CCcccc
Q 013008 251 FVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYL-W-AHEHYGIF---PDIMTLAKPLA-GGLPIG 324 (451)
Q Consensus 251 i~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~-~-~~~~~~~~---pdi~t~sK~lg-~G~~iG 324 (451)
++...++++|. .++.+.+++|.++|++||+++|+||+|..+-..+.. . .....+.. .-+.+|||.++ .|+|+|
T Consensus 168 ~l~~p~NPtG~-~~~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~RiG 246 (386)
T PRK09082 168 ILNTPHNPSGT-VWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRERAFVVSSFGKTYHVTGWKVG 246 (386)
T ss_pred EEeCCCCCCCc-CCCHHHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCccCcEEEEeechhhccchhhhhh
Confidence 66554555564 568899999999999999999999999876433321 1 11122222 22347999997 699999
Q ss_pred cccccHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH--------------HHhCCCCcceecc-cceeEE
Q 013008 325 AALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS--------------KLARNPHVKDVRG-LGLIIG 389 (451)
Q Consensus 325 ~v~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~--------------~~~~~~~~~~v~g-~G~~~~ 389 (451)
|+++++++++.+........++.+.+++.++.+.++. .+.+.++ .+++. .+...+. .|+++|
T Consensus 247 ~iv~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~~~g~~~~~ 323 (386)
T PRK09082 247 YCVAPAALSAEFRKVHQYNTFTVNTPAQLALADYLRA--EPEHYLELPAFYQAKRDRFRAALANS-RFKLLPCEGTYFQL 323 (386)
T ss_pred hhhCCHHHHHHHHHHHhhhcCCCChHHHHHHHHHHhC--ChHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCCeeEEEE
Confidence 9999999998876544445667788888887777652 2332222 22222 2222233 356777
Q ss_pred EEec----CChHHHHHHHH-HCCceeeecCC-------CCEEEEeCCCCCCHHHHHHHHHHHHH
Q 013008 390 IEFD----VSATPVVDACR-DSGLLVLTAGK-------GNVVRLVPPLIISEQELDQAVEILCK 441 (451)
Q Consensus 390 ~~~~----~~~~~~~~~l~-~~Gv~~~~~~~-------~~~iri~~~~~~t~e~i~~~l~~l~~ 441 (451)
+.+. .+..++++.|+ ++||.+.|+.. .+++|++.+ .+++++++++++|.+
T Consensus 324 ~~~~~~~~~~~~~~~~~l~~~~~v~v~pg~~f~~~~~~~~~~Ri~~~--~~~~~l~~~~~rl~~ 385 (386)
T PRK09082 324 VDYSAISDLDDVEFCQWLTREHGVAAIPLSVFYADPFPHRLVRLCFA--KQEETLDAAAERLCQ 385 (386)
T ss_pred EeccccCCCCHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCEEEEEec--CCHHHHHHHHHHHhh
Confidence 7763 24678888875 67999988631 257888654 589999999999875
No 170
>PRK07777 aminotransferase; Validated
Probab=99.92 E-value=1.5e-22 Score=203.04 Aligned_cols=318 Identities=19% Similarity=0.169 Sum_probs=202.7
Q ss_pred EEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccC--CCCCHHHHHHHHHHhhccC----CC-eEEecCCHHHHHHHH
Q 013008 99 EYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSN--MYYSIPQIELAKRLVACSF----AD-RVFFSNTGTEANEAA 171 (451)
Q Consensus 99 ~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~--~~~~~~~~~l~~~l~~~~~----~e-~v~~~~sG~eA~~~a 171 (451)
.++||..|..... .++.+.+++.+.+......+. .+....+..+++++.+.++ .+ +|++|+||++|+..+
T Consensus 25 ~~i~l~~g~p~~~---~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~ 101 (387)
T PRK07777 25 GAVNLGQGFPDED---GPPEMLEAAQEAIAGGVNQYPPGPGIPELRAAIAAQRRRRYGLEYDPDTEVLVTVGATEAIAAA 101 (387)
T ss_pred CeEEccCCCCCCC---CCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHH
Confidence 5688888875332 356778887777654221111 1122235556665555554 33 699999999999998
Q ss_pred HHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCC-eeEeeCCCHHHHHHhcCCCCeEEE
Q 013008 172 IKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPG-VNFVEYGNIEATRKLIQPGKTAAV 250 (451)
Q Consensus 172 l~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~le~~l~~~~~aav 250 (451)
+.... .++|+|++.+|+|+++....... +..... .+..+. ..+. .|+++|++.+.+ ++.+|
T Consensus 102 ~~~~~-----------~~gd~vli~~p~y~~~~~~~~~~-g~~~~~---~~~~~~~~~~~--~d~~~l~~~~~~-~~~~v 163 (387)
T PRK07777 102 VLGLV-----------EPGDEVLLIEPYYDSYAAVIAMA-GAHRVP---VPLVPDGRGFA--LDLDALRAAVTP-RTRAL 163 (387)
T ss_pred HHHhc-----------CCCCEEEEeCCCchhhHHHHHHC-CCEEEE---eecCCccCCCc--CCHHHHHHhcCc-ccEEE
Confidence 87543 15889999999998875333222 211111 111111 0000 278999998865 45666
Q ss_pred EEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCccccc-cccccc-C---CCcceeeeccccc-CCcccc
Q 013008 251 FVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYL-WAHEHY-G---IFPDIMTLAKPLA-GGLPIG 324 (451)
Q Consensus 251 i~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~-~~~~~~-~---~~pdi~t~sK~lg-~G~~iG 324 (451)
++++.++++|. .++.+.+++|.++|++|++++|+||+|.++...+.. .....+ + ...-+.+|||.++ .|+|+|
T Consensus 164 ~l~~p~NPtG~-~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG 242 (387)
T PRK07777 164 IVNSPHNPTGT-VLTAAELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPGMRERTVTISSAAKTFNVTGWKIG 242 (387)
T ss_pred EEcCCCCCCCc-cCCHHHHHHHHHHHHhcCcEEEEeccchhcccCCCCcccHhhCCCCcCcEEEEeechhhccCcCceeE
Confidence 66665666665 568999999999999999999999999877443321 111111 1 1222447999998 699999
Q ss_pred cccccHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH--------------HHhCCCCcceecc-cceeEE
Q 013008 325 AALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS--------------KLARNPHVKDVRG-LGLIIG 389 (451)
Q Consensus 325 ~v~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~--------------~~~~~~~~~~v~g-~G~~~~ 389 (451)
|+++++++++.+.......+++.+++.+.++..+++. .+.+.++ .++.+. +....+ .|+++|
T Consensus 243 ~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~g~~~~~ 319 (387)
T PRK07777 243 WACGPAPLIAAVRAAKQYLTYVGGAPFQPAVAHALDH--EDAWVAALRDSLQAKRDRLAAGLAEAG-FEVHDSAGTYFLC 319 (387)
T ss_pred EEecCHHHHHHHHHHHhhcccCCCCHHHHHHHHHHhC--CcHHHHHHHHHHHHHHHHHHHHHHhCC-CCccCCCcceEEE
Confidence 9999999888776444444566666667666666652 2233222 222222 222233 355677
Q ss_pred EEec----CChHHHHHHHH-HCCceeeecCC--------CCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 013008 390 IEFD----VSATPVVDACR-DSGLLVLTAGK--------GNVVRLVPPLIISEQELDQAVEILCKTL 443 (451)
Q Consensus 390 ~~~~----~~~~~~~~~l~-~~Gv~~~~~~~--------~~~iri~~~~~~t~e~i~~~l~~l~~~l 443 (451)
+.+. .++.++++.|+ ++||.+.|+.. .+.+|++. ..+++++++++++|.++.
T Consensus 320 ~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~~~~~Ri~~--~~~~~~l~~~l~~l~~~~ 384 (387)
T PRK07777 320 ADPRPLGYDDGTEFCRALPERVGVAAIPMSVFYDPADAWNHLVRFAF--CKRDDTLDEAIRRLRALR 384 (387)
T ss_pred ecccccCCCCHHHHHHHHHHhCCEEEeCchHhCCCCcCCCCeEEEEe--cCCHHHHHHHHHHHHHHh
Confidence 6753 25678999997 57999987631 24688865 458999999999998765
No 171
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.91 E-value=1.5e-22 Score=200.31 Aligned_cols=308 Identities=17% Similarity=0.146 Sum_probs=201.6
Q ss_pred EEeeccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHhhccC--CCeEEecCCHHHHHHHHHHHHHH
Q 013008 100 YLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSF--ADRVFFSNTGTEANEAAIKFARK 177 (451)
Q Consensus 100 ~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~e~v~~~~sG~eA~~~al~~a~~ 177 (451)
.+||..|.. .++ .+|.+.+++.+.+..... ..+......+|.+.++++++ .++|++++|+++|+..+++++.
T Consensus 24 ~~~l~~~~~--~~~-~p~~~~~a~~~~~~~~~~--~~y~~~~~~~lr~~ia~~~~~~~~~i~it~G~~~~l~~~~~~l~- 97 (351)
T PRK14807 24 KYKMDANET--PFE-LPEEVIKNIQEIVKSSQV--NIYPDPTAEKLREELARYCSVVPTNIFVGNGSDEIIHLIMLAFI- 97 (351)
T ss_pred eeEccCCCC--CCC-CCHHHHHHHHHHhhcCcc--cCCCCccHHHHHHHHHHHhCCCcccEEEecCHHHHHHHHHHHhc-
Confidence 466766654 454 578899999887753211 22333335778888888876 6799999999999999888654
Q ss_pred HhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEccccC
Q 013008 178 FQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQG 257 (451)
Q Consensus 178 ~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~~~ 257 (451)
+++|+|++.+|+|.++....... |..... .+...+.. -|++++++.+...++++|++...++
T Consensus 98 ----------~~gd~Vlv~~p~y~~~~~~~~~~-g~~~~~---v~~~~~~~----~d~~~l~~~~~~~~~k~v~l~~p~N 159 (351)
T PRK14807 98 ----------NKGDVVIYPHPSFAMYSVYSKIA-GAVEIP---VKLKEDYT----YDVGSFIKVIEKYQPKLVFLCNPNN 159 (351)
T ss_pred ----------CCCCEEEEeCCChHHHHHHHHHc-CCeEEE---eecCCCCC----CCHHHHHHHhhccCCCEEEEeCCCC
Confidence 26899999999998665432222 221111 11111111 2789999998754566666655566
Q ss_pred CCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccc--cccccCCCcceeeeccccc-CCcccccccccHHHHh
Q 013008 258 EGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLW--AHEHYGIFPDIMTLAKPLA-GGLPIGAALVTEKVAS 334 (451)
Q Consensus 258 ~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~--~~~~~~~~pdi~t~sK~lg-~G~~iG~v~~~~~i~~ 334 (451)
++|...+ .+++.++|++++.++|+||+|.+|. +... .....+...-+.+|||.++ .|+|+||+++++++++
T Consensus 160 PtG~~~~----~~~l~~l~~~~~~~~ivDe~y~~~~--~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~v~~~~~~~ 233 (351)
T PRK14807 160 PTGSVIE----REDIIKIIEKSRGIVVVDEAYFEFY--GNTIVDVINEFENLIVLRTLSKAFGLAGLRVGYAVANENILK 233 (351)
T ss_pred CCCCCCC----HHHHHHHHHhCCCEEEEeCcchhhc--ccchHHHhhhCCCEEEEecchHhcccchhceeeeecCHHHHH
Confidence 6676554 5666777778888999999997762 3211 1111222233447999998 7999999999999998
Q ss_pred hccCCCccCCCCCcHHHHHHHHHHHHHhcChH----HHHH------HHhCCCCcceecccceeEEEEecCChHHHHHHHH
Q 013008 335 AINYGDHGSTFAGSPLVCNAAIAVLDKISNPA----FLAS------KLARNPHVKDVRGLGLIIGIEFDVSATPVVDACR 404 (451)
Q Consensus 335 ~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~----~~~~------~~~~~~~~~~v~g~G~~~~~~~~~~~~~~~~~l~ 404 (451)
.+.... ..++.+++++.++.++|+.-.-++ +.++ .+++.+.+...++.|.++|+.+. +..++++.|.
T Consensus 234 ~~~~~~--~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~~~~i~~~-~~~~~~~~l~ 310 (351)
T PRK14807 234 YLNLVK--SPYNINSLSQVIALKVLRTGVLKERVNYILNERERLIKELSKIPGIKVYPSKTNFILVKFK-DADYVYQGLL 310 (351)
T ss_pred HHHHcc--CCCCcCHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCcEECcCCccEEEEEcC-CHHHHHHHHH
Confidence 886432 235567888888888775311011 1111 22334444445566888888774 4678899999
Q ss_pred HCCceeeecCC----CCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 013008 405 DSGLLVLTAGK----GNVVRLVPPLIISEQELDQAVEILCKTL 443 (451)
Q Consensus 405 ~~Gv~~~~~~~----~~~iri~~~~~~t~e~i~~~l~~l~~~l 443 (451)
++||.+.+... .+.+|+++. +.++.+++++.|++++
T Consensus 311 ~~gV~v~~~~~~~~~~~~iRis~~---~~~~~~~l~~~l~~~~ 350 (351)
T PRK14807 311 ERGILVRDFSKVEGLEGALRITVS---SCEANDYLINGLKELL 350 (351)
T ss_pred HCCEEEEECCCCCCCCCeEEEEcC---CHHHHHHHHHHHHHhh
Confidence 99999977531 357888644 5778888888887653
No 172
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.91 E-value=9.5e-23 Score=201.95 Aligned_cols=308 Identities=15% Similarity=0.157 Sum_probs=199.3
Q ss_pred CCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHhhccC--CCeEEecCCHHHHHHHHHHH
Q 013008 97 GREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSF--ADRVFFSNTGTEANEAAIKF 174 (451)
Q Consensus 97 G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~e~v~~~~sG~eA~~~al~~ 174 (451)
++.+|||..|.. .++ .+|.+.+++.+.+.+... .|+.....+|.+.++++++ .++|++|+|+++|+..++++
T Consensus 23 ~~~~i~l~~~~~--~~~-~~~~~~~a~~~~~~~~~~---~y~~~~~~~lr~aia~~~~~~~~~I~it~G~~~al~~~~~~ 96 (353)
T PRK05387 23 LAKLIKLNTNEN--PYP-PSPKVLEAIRAALGDDLR---LYPDPNADALRQAIAAYYGLDPEQVFVGNGSDEVLAHAFLA 96 (353)
T ss_pred ccceeeccCCCC--CCC-CCHHHHHHHHHHhhhhhh---cCCCCcHHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHH
Confidence 357899998876 354 478899999887764211 1222234678888888775 77999999999999999997
Q ss_pred HHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEcc
Q 013008 175 ARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEP 254 (451)
Q Consensus 175 a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep 254 (451)
+. +++|.|++.+|+|..+....... |..... .+...+.. -|++++++. ....+++.|
T Consensus 97 l~-----------~~gd~vlv~~P~y~~~~~~~~~~-g~~~~~---v~~~~~~~----~d~~~l~~~----~~~v~~~~P 153 (353)
T PRK05387 97 FF-----------NHDRPLLFPDITYSFYPVYAGLY-GIPYEE---IPLDDDFS----IDVEDYLRP----NGGIIFPNP 153 (353)
T ss_pred hc-----------CCCCEEEEeCCCHHHHHHHHHHc-CCEEEE---eecCCCCC----CCHHHHHhc----CCEEEEeCC
Confidence 65 26899999999996655332222 211111 11111111 167777632 234566666
Q ss_pred ccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccccccCCCcceeeeccccc-CCcccccccccHHHH
Q 013008 255 IQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLA-GGLPIGAALVTEKVA 333 (451)
Q Consensus 255 ~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~t~sK~lg-~G~~iG~v~~~~~i~ 333 (451)
. +++|. ..+.+.+++|.+.|+ ++++|+||+|..|+........+..+...-+.+|||.++ .|+|+||++++++++
T Consensus 154 ~-NPtG~-~~~~~~~~~l~~~~~--~~~livDe~y~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~~~~ 229 (353)
T PRK05387 154 N-APTGI-ALPLAEIERILAANP--DSVVVIDEAYVDFGGESAIPLIDRYPNLLVVQTFSKSRSLAGLRVGFAIGHPELI 229 (353)
T ss_pred C-CCCCC-CCCHHHHHHHHHhCC--CcEEEEeCcccccCCcchHHHHhhCCCEEEEEehhHhhcchhhhceeeecCHHHH
Confidence 4 44454 456666776666543 999999999987742111111111221222347999998 799999999999998
Q ss_pred hhccCCCc-cCCCCCcHHHHHHHHHHHHHhcChHHHHH--------------HHhCCCCcceecccceeEEEEec-CChH
Q 013008 334 SAINYGDH-GSTFAGSPLVCNAAIAVLDKISNPAFLAS--------------KLARNPHVKDVRGLGLIIGIEFD-VSAT 397 (451)
Q Consensus 334 ~~~~~~~~-~~t~~~~~~~~aaa~aal~~~~~~~~~~~--------------~~~~~~~~~~v~g~G~~~~~~~~-~~~~ 397 (451)
+.+..... ..+++.+.+++.++.++|+ ..++.++ .++.++ +...+..|.++++.++ .+..
T Consensus 230 ~~l~~~~~~~~~~~~~~~~q~~~~~~l~---~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~ 305 (353)
T PRK05387 230 EALNRVKNSFNSYPLDRLAQAGAIAAIE---DEAYFEETRAKVIATRERLVEELEALG-FEVLPSKANFVFARHPSHDAA 305 (353)
T ss_pred HHHHHhhccCCCCCcCHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHHHHCC-CeECCCcCcEEEEECCCCCHH
Confidence 88764322 2356678888888887775 2222221 223332 2223445677777764 4677
Q ss_pred HHHHHHHHCCceeeecCC---CCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q 013008 398 PVVDACRDSGLLVLTAGK---GNVVRLVPPLIISEQELDQAVEILCKTLP 444 (451)
Q Consensus 398 ~~~~~l~~~Gv~~~~~~~---~~~iri~~~~~~t~e~i~~~l~~l~~~l~ 444 (451)
++++.|.++||.+.+.+. .+.+|+++. +++++++++++|++++.
T Consensus 306 ~~~~~l~~~gi~v~~~~~~~~~~~iRis~~---~~~~~~~~~~~L~~~~~ 352 (353)
T PRK05387 306 ELAAKLRERGIIVRHFNKPRIDQFLRITIG---TDEEMEALVDALKEILA 352 (353)
T ss_pred HHHHHHHHCCEEEEECCCCCCCCeEEEEeC---CHHHHHHHHHHHHHHhh
Confidence 899999999999876532 357888654 67999999999998764
No 173
>PRK08175 aminotransferase; Validated
Probab=99.91 E-value=3.8e-22 Score=200.54 Aligned_cols=321 Identities=13% Similarity=0.092 Sum_probs=207.4
Q ss_pred CCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcc-ccc--CCCCCHHHHHHHHHHhhccC----CC-eEEecCCHHHHH
Q 013008 97 GREYLDLSSGIAVNALGHGDADWIKAVVDQANVLT-HVS--NMYYSIPQIELAKRLVACSF----AD-RVFFSNTGTEAN 168 (451)
Q Consensus 97 G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~-~~~--~~~~~~~~~~l~~~l~~~~~----~e-~v~~~~sG~eA~ 168 (451)
|.+++||..+.. .+..+|.+.+++.+.+.... ..+ ..+..+.+..+++.+.+.++ .+ ++++|+|+++++
T Consensus 28 ~~~~i~l~~g~p---~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~i~~t~G~~~~l 104 (395)
T PRK08175 28 GEDIIDFSMGNP---DGPTPPHIVEKLCEVAQRPDTHGYSTSRGIPRLRRAISRWYQDRYDVDIDPESEAIVTIGSKEGL 104 (395)
T ss_pred CCCeEEcCCCCC---CCCCCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHH
Confidence 567788887754 33456778888877664321 111 11122335666666655433 45 799999999999
Q ss_pred HHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCC--CC
Q 013008 169 EAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQP--GK 246 (451)
Q Consensus 169 ~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~--~~ 246 (451)
..+++.+. +++++|++.+|+|..+.......+ ..... .+...+ ..+.++++++++. .+
T Consensus 105 ~~~~~~~~-----------~~gd~Vlv~~P~y~~~~~~~~~~g-~~~~~---v~~~~~-----~~~~~~l~~~l~~~~~~ 164 (395)
T PRK08175 105 AHLMLATL-----------DHGDTVLVPNPSYPIHIYGAVIAG-AQVRS---VPLVEG-----VDFFNELERAIRESYPK 164 (395)
T ss_pred HHHHHHhC-----------CCCCEEEEcCCCCcchHHHHHHcC-CeEEE---EecccC-----CCcHHHHHHHHhhccCC
Confidence 98877554 268999999999987654443222 11100 011111 0146788888762 35
Q ss_pred eEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccc-cc-cc---cCCCcceeeeccccc-CC
Q 013008 247 TAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLW-AH-EH---YGIFPDIMTLAKPLA-GG 320 (451)
Q Consensus 247 ~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~-~~-~~---~~~~pdi~t~sK~lg-~G 320 (451)
+++|++...++++| ..++.+.+++|.++|++||+++|+||+|.++-..+... .. .. .+...-+.+|||.+| .|
T Consensus 165 ~~~v~i~~p~NPtG-~~~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~pG 243 (395)
T PRK08175 165 PKMMILGFPSNPTA-QCVELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPGAKDVAVEFFTLSKSYNMAG 243 (395)
T ss_pred ceEEEEeCCCCCCC-CCCCHHHHHHHHHHHHHcCcEEEEecchHhhccCCCCCcchhcCCCcccCEEEEeeccccccCcc
Confidence 66777664444555 46799999999999999999999999998764333211 11 11 122223458999997 69
Q ss_pred cccccccccHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH--------------HHhCCCCccee-cccc
Q 013008 321 LPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS--------------KLARNPHVKDV-RGLG 385 (451)
Q Consensus 321 ~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~--------------~~~~~~~~~~v-~g~G 385 (451)
+|+||+++++++++.+........++.+.+.+.++.++|+. .+.+.++ .++.++ +... ...|
T Consensus 244 lRiG~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~L~~~~-~~~~~p~~g 320 (395)
T PRK08175 244 WRIGFMVGNPELVSALARIKSYHDYGTFTPLQVAAIAALEG--DQQCVRDIAEQYKRRRDVLVKGLHEAG-WMVEMPKAS 320 (395)
T ss_pred hhheeeeCCHHHHHHHHHHHhhcccCCCcHHHHHHHHHHhC--cHHHHHHHHHHHHHHHHHHHHHHHHcC-CcccCCCEE
Confidence 99999999999999876433334556667778877777753 1222211 223333 2222 3358
Q ss_pred eeEEEEecC-----ChHHHHHHHH-HCCceeeecCC-----CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 013008 386 LIIGIEFDV-----SATPVVDACR-DSGLLVLTAGK-----GNVVRLVPPLIISEQELDQAVEILCKTLPVL 446 (451)
Q Consensus 386 ~~~~~~~~~-----~~~~~~~~l~-~~Gv~~~~~~~-----~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~ 446 (451)
+++|+++.. ...+++++++ +.||.+.|+.. .+.+|++. ..+++.+.+++++|.+++++.
T Consensus 321 ~~i~i~l~~~~~~~~~~~~~~~l~~~~gv~v~p~~~f~~~~~~~lRis~--~~~~~~~~~al~~l~~~l~~~ 390 (395)
T PRK08175 321 MYVWAKIPEPYAAMGSLEFAKKLLNEAKVCVSPGIGFGDYGDTHVRFAL--IENRDRIRQAIRGIKAMFRAD 390 (395)
T ss_pred EEEEEECCcccCCCCHHHHHHHHHHhCCEEEeCchhhCcCCCCeEEEEe--CCCHHHHHHHHHHHHHHHHhc
Confidence 899998842 3578888876 57999998621 25788865 468999999999999998754
No 174
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.91 E-value=2.2e-22 Score=201.87 Aligned_cols=325 Identities=16% Similarity=0.089 Sum_probs=209.0
Q ss_pred CEEEeeccCcccccCCCCCHHHHHHHHHHHhhccccc--CCCCCHHHHHHHHHHhhccC-----CCeEEecCCHHHHHHH
Q 013008 98 REYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVS--NMYYSIPQIELAKRLVACSF-----ADRVFFSNTGTEANEA 170 (451)
Q Consensus 98 ~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~--~~~~~~~~~~l~~~l~~~~~-----~e~v~~~~sG~eA~~~ 170 (451)
..+|||..|... ++ .++.+.+++.+.+......+ ..+....++.+++.+.+.++ .++|++|+|+++|+..
T Consensus 30 ~~~i~l~~~~~~--~~-~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~it~G~~~al~~ 106 (391)
T PRK07309 30 PGILKLTLGEPD--FT-TPDHVKEAAKRAIDANQSHYTGMAGLLELRQAAADFVKEKYNLDYAPENEILVTIGATEALSA 106 (391)
T ss_pred CCeEEcCCCCCC--CC-CCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHH
Confidence 458999888763 44 36778888888776421111 11122335556666554433 3589999999999999
Q ss_pred HHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCC--CCeE
Q 013008 171 AIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQP--GKTA 248 (451)
Q Consensus 171 al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~--~~~a 248 (451)
+++.+. .+++.|++.+|+|.++....... +..... .+..... + .-|++.|+++++. .+++
T Consensus 107 ~~~~~~-----------~~gd~vl~~~p~y~~~~~~~~~~-g~~~~~---~~~~~~~-~--~~d~~~l~~~~~~~~~~~~ 168 (391)
T PRK07309 107 SLTAIL-----------EPGDKVLLPAPAYPGYEPIVNLV-GAEIVE---IDTTEND-F--VLTPEMLEKAILEQGDKLK 168 (391)
T ss_pred HHHHhc-----------CCCCEEEEeCCCCcchHHHHHHc-CCEEEE---EecCCcC-C--cCCHHHHHHHhhccCCCeE
Confidence 988654 16889999999999875433322 211111 1111100 0 0278999998863 3566
Q ss_pred EEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCccccc-cccccc--CCCcceeeeccccc-CCcccc
Q 013008 249 AVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYL-WAHEHY--GIFPDIMTLAKPLA-GGLPIG 324 (451)
Q Consensus 249 avi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~-~~~~~~--~~~pdi~t~sK~lg-~G~~iG 324 (451)
+|++...++++| ...+.+.+++|.++|++||+++|+||+|..|-..|.. .....+ +...-+.+|||.++ .|+|+|
T Consensus 169 ~i~l~~P~NPtG-~~~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRvG 247 (391)
T PRK07309 169 AVILNYPANPTG-VTYSREQIKALADVLKKYDIFVISDEVYSELTYTGEPHVSIAEYLPDQTILINGLSKSHAMTGWRIG 247 (391)
T ss_pred EEEEECCCCCCC-cCcCHHHHHHHHHHHHHcCcEEEEEccccceeeCCCCCCCHHHhccCCEEEEecChhhccCccceeE
Confidence 666663344555 4678899999999999999999999999887443421 111111 11222347999998 799999
Q ss_pred cccccHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcC--h----HHHHH------HHhCCCCcceecc-cceeEEEE
Q 013008 325 AALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISN--P----AFLAS------KLARNPHVKDVRG-LGLIIGIE 391 (451)
Q Consensus 325 ~v~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~--~----~~~~~------~~~~~~~~~~v~g-~G~~~~~~ 391 (451)
|+++++++++.+.......+.+.+++++.++..+|+.... . .+.++ .++.+. +....+ .|+++|+.
T Consensus 248 ~~v~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~p~gg~~~~~~ 326 (391)
T PRK07309 248 LIFAPAEFTAQLIKSHQYLVTAATTMAQFAAVEALTNGKDDALPMKKEYIKRRDYIIEKMTDLG-FKIIKPDGAFYIFAK 326 (391)
T ss_pred EEEeCHHHHHHHHHHHhhcccCCChHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHCC-CeecCCCeeEEEEEE
Confidence 9999999998876433333446678888888888763211 1 11111 222232 222333 35666776
Q ss_pred ec----CChHHHHHHHH-HCCceeeecC---C--CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHh
Q 013008 392 FD----VSATPVVDACR-DSGLLVLTAG---K--GNVVRLVPPLIISEQELDQAVEILCKTLPVLD 447 (451)
Q Consensus 392 ~~----~~~~~~~~~l~-~~Gv~~~~~~---~--~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~~ 447 (451)
+. .+..++++.++ ++||.+.|+. . ++++|++.+ .+.+++++++++|.+++++++
T Consensus 327 l~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~--~~~~~l~~~i~~l~~~~~~~~ 390 (391)
T PRK07309 327 IPAGYNQDSFKFLQDFARKKAVAFIPGAAFGPYGEGYVRLSYA--ASMETIKEAMKRLKEYMEEHA 390 (391)
T ss_pred CCCCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEec--CCHHHHHHHHHHHHHHHHhhc
Confidence 63 13567887654 6899998864 1 357888655 478999999999999997764
No 175
>PLN02721 threonine aldolase
Probab=99.91 E-value=1.2e-22 Score=201.04 Aligned_cols=319 Identities=14% Similarity=0.145 Sum_probs=202.7
Q ss_pred EEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHhhccCCCeEEecCCHHHHHHHHHHHHHHH
Q 013008 99 EYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKF 178 (451)
Q Consensus 99 ~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~e~v~~~~sG~eA~~~al~~a~~~ 178 (451)
+++||.++... ..+|.+.+++.+. ..... ..++.+...+|++.++++++.+.++++++|++++..++.+...
T Consensus 6 ~~~~~~~~~~~----~~~~~~~~a~~~~--~~~~~-~~~~~~~~~~l~~~la~~~~~~~~~~~~~Gs~a~~~~l~~~~~- 77 (353)
T PLN02721 6 RVVDLRSDTVT----KPTDAMRAAMANA--EVDDD-VLGYDPTALRLEEEMAKIFGKEAALFVPSGTMGNLISVLVHCD- 77 (353)
T ss_pred hhhhhhccccc----CCCHHHHHHHHhc--cCCCc-ccCCCHHHHHHHHHHHHHhCCceeEEecCccHHHHHHHHHHcc-
Confidence 56788888774 2678999998764 11111 2244555789999999999988889999999999888776541
Q ss_pred hhhcCCCCCCCCceEEEEcCCccCChhh--hhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCC------CCeEEE
Q 013008 179 QRHSNPDSKEPATEFVSFTNSFHGRTMG--ALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQP------GKTAAV 250 (451)
Q Consensus 179 ~~~~~~~~~~~~~~ii~~~~~yhg~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~------~~~aav 250 (451)
.++|.|++.+++|...... .....+.... +.+..++.. .|++.+++.+++ .++++|
T Consensus 78 ---------~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~---~v~~~~~~~----~d~~~l~~~i~~~~~~~~~~~~~v 141 (353)
T PLN02721 78 ---------VRGSEVILGDNSHIHLYENGGISTLGGVHPR---TVKNNEDGT----MDLDAIEAAIRPKGDDHFPTTRLI 141 (353)
T ss_pred ---------CCCCeEEEcCccceehhcccchhhhcCceeE---ecCCCcCCC----cCHHHHHHHHHhccCCCCCcceEE
Confidence 1488999999987432211 1111111110 011111110 278999999862 367899
Q ss_pred EEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccc-cccccccCCCcc--eeeecccccCCccccc-c
Q 013008 251 FVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGY-LWAHEHYGIFPD--IMTLAKPLAGGLPIGA-A 326 (451)
Q Consensus 251 i~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~-~~~~~~~~~~pd--i~t~sK~lg~G~~iG~-v 326 (451)
+++++++++|+..++.+++++|.++|++||+++|+||+|. ++.... ...........| +++++|++++ ++|+ +
T Consensus 142 ~l~~~~~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~-~~~~~~~~~~~~~~~~~~d~~~~s~sK~l~~--~~G~~~ 218 (353)
T PLN02721 142 CLENTHANCGGRCLSVEYTDKVGELAKRHGLKLHIDGARI-FNASVALGVPVHRLVKAADSVSVCLSKGLGA--PVGSVI 218 (353)
T ss_pred EEeccccccCCccccHHHHHHHHHHHHHcCCEEEEEchhh-hcchhhhCCCHHHHhhhCCEEEEecccccCC--ceeeEE
Confidence 9988877766567899999999999999999999999985 321110 001111111233 4578999874 5665 6
Q ss_pred cccHHHHhhccCCCc--cCCCCCcHHHHHHHHHHHHHh-cC-hH------HHHHHHhCCCCcc--eecccceeEEEEec-
Q 013008 327 LVTEKVASAINYGDH--GSTFAGSPLVCNAAIAVLDKI-SN-PA------FLASKLARNPHVK--DVRGLGLIIGIEFD- 393 (451)
Q Consensus 327 ~~~~~i~~~~~~~~~--~~t~~~~~~~~aaa~aal~~~-~~-~~------~~~~~~~~~~~~~--~v~g~G~~~~~~~~- 393 (451)
++++++++.+..... ..+....+..+++++.+++.. +. .. ++...+++++.+. .....+.++++.+.
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~ 298 (353)
T PLN02721 219 VGSKSFIRKAKRLRKTLGGGMRQVGVLAAAALVALQENVPKLEDDHKKAKLLAEGLNQIKGLRVNVAAVETNIVYFDITD 298 (353)
T ss_pred ecCHHHHHhHHHHHHhcCCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEecCCccceEEEEEccC
Confidence 678888876543211 111111122333444444321 11 10 1111334444331 12334567777774
Q ss_pred ---CChHHHHHHHHHCCceeeecCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 013008 394 ---VSATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTLPV 445 (451)
Q Consensus 394 ---~~~~~~~~~l~~~Gv~~~~~~~~~~iri~~~~~~t~e~i~~~l~~l~~~l~~ 445 (451)
.....+++.|.++||.+.+.+. ..+|+++++.++++|+++++++|++++..
T Consensus 299 ~~~~~~~~~~~~L~~~gi~v~~~~~-~~lR~~~~~~~~~~~i~~~~~~l~~~~~~ 352 (353)
T PLN02721 299 GSRITAEKLCKSLEEHGVLLMPGNS-SRIRVVTHHQISDSDVQYTLSCFQQAALT 352 (353)
T ss_pred CccccHHHHHHHHHhCCcEEecCCC-ceEEEEecCcCCHHHHHHHHHHHHHHhhc
Confidence 3467899999999999999865 78999999899999999999999988754
No 176
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.91 E-value=1.4e-22 Score=199.21 Aligned_cols=295 Identities=17% Similarity=0.078 Sum_probs=196.0
Q ss_pred CEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHhhccC---CCeEEecCCHHHHHHHHHHH
Q 013008 98 REYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSF---ADRVFFSNTGTEANEAAIKF 174 (451)
Q Consensus 98 ~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~---~e~v~~~~sG~eA~~~al~~ 174 (451)
.+++||.+|.. ++|...+.+.. ..+. .|+... .+|.+.++++++ .++|++++|++|++....++
T Consensus 24 ~~~i~ls~Nen--p~~~~~~~~~~---~~~~-------~Yp~~~-~~L~~~ia~~~~~~~~~~I~i~~Gs~e~i~~l~~~ 90 (339)
T PRK06959 24 DAWLDLSTGIN--PHGYPVPPVPA---DAWR-------RLPEDD-DGLAACAARYYGAPDAAHVLPVAGSQAAIRALPAL 90 (339)
T ss_pred hhhceeccCCC--CCCCCCCCCCH---HHHH-------hCCCch-HHHHHHHHHHhCCCCcccEEECcCHHHHHHHHHHh
Confidence 46899999874 77765333321 1221 144443 789999999887 37999999999999865442
Q ss_pred HHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEcc
Q 013008 175 ARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEP 254 (451)
Q Consensus 175 a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep 254 (451)
. . ++ +|++.+|+|.++...+...+. .+..++.++ +.+++ ....+++++|
T Consensus 91 -~---~--------~g-~v~v~~P~y~~y~~~~~~~g~-------------~~~~v~~~~-~~~~~----~~~~v~l~nP 139 (339)
T PRK06959 91 -L---P--------RG-RVGIAPLAYSEYAPAFARHGH-------------RVVPLDEAA-DTLPA----ALTHLIVVNP 139 (339)
T ss_pred -c---C--------CC-eEEEcCCCcHHHHHHHHHCCC-------------EEEeecccc-hhccc----cCCEEEEeCC
Confidence 2 1 34 489999999887654433221 122233222 22222 1236788888
Q ss_pred ccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccccccCCCcceeeeccccc-CCcccccccccHHHH
Q 013008 255 IQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLA-GGLPIGAALVTEKVA 333 (451)
Q Consensus 255 ~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~t~sK~lg-~G~~iG~v~~~~~i~ 333 (451)
.|+ +|. +.+.+.+++|.+.|+++++++|+||+|..|.............-..-+.||||.+| +|+|+||++++++++
T Consensus 140 nNP-TG~-~~s~~~l~~l~~~~~~~~~~vI~DEay~~~~~~~s~~~~~~~~~vi~l~SfSK~~gl~GlRiGy~v~~~~li 217 (339)
T PRK06959 140 NNP-TAE-RLPAARLLRWHAQLAARGGTLIVDEAFADTLPAASLAAHTDRPGLVVLRSVGKFFGLAGVRAGFVLAAPALL 217 (339)
T ss_pred CCC-CCC-CCCHHHHHHHHHHHHHcCCEEEEECCCccCCCcccchhccCCCCEEEEecChhhcCCcchheEEEecCHHHH
Confidence 644 443 56888899999999999999999999988742111111111111122348999999 799999999999999
Q ss_pred hhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH--------------HHhCCCCcceecccceeEEEEecCChHHH
Q 013008 334 SAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS--------------KLARNPHVKDVRGLGLIIGIEFDVSATPV 399 (451)
Q Consensus 334 ~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~--------------~~~~~~~~~~v~g~G~~~~~~~~~~~~~~ 399 (451)
+.+.... ..++.|.++++++.++|+ +.++.++ .++.+. +. +...++++|+.+. +..++
T Consensus 218 ~~l~~~~--~~~~vs~~~q~a~~~~L~---~~~~~~~~~~~~~~~r~~l~~~L~~~g-~~-~~~~~~f~~~~~~-~~~~l 289 (339)
T PRK06959 218 AALRDAL--GAWTVSGPARHAVRAAFA---DAAWQAAMRERLAADGARLAALLRAHG-FA-VHATPLFSWTDDP-RAAAL 289 (339)
T ss_pred HHHHHhc--CCCCCcHHHHHHHHHHhC---cHHHHHHHHHHHHHHHHHHHHHHHHCC-CC-ccCcceEEEEeCC-CHHHH
Confidence 9886432 356678889999888885 2223222 222332 21 2234677777764 56789
Q ss_pred HHHHHHCCceeeecCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHhh
Q 013008 400 VDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTLPVLDS 448 (451)
Q Consensus 400 ~~~l~~~Gv~~~~~~~~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~~~ 448 (451)
.+.|.++||++...+..+.+||+ +..+++++++++++|+++++.+..
T Consensus 290 ~~~l~~~GI~vr~~~~~~~lRis--i~~~~~e~~~l~~al~~~~~~~~~ 336 (339)
T PRK06959 290 HAALARRGIWTRYFAPPPSVRFG--LPADEAEWQRLEDALAECVPTLAA 336 (339)
T ss_pred HHHHHhCCeEEEECCCCCeEEEE--CCCCHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999876544678885 435788999999999998887754
No 177
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=99.91 E-value=2.7e-23 Score=197.47 Aligned_cols=308 Identities=18% Similarity=0.141 Sum_probs=203.2
Q ss_pred CHHHHHHHHHHHhhc-cc--ccCCCCCHHHHHHHHHHhhccC-----CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCC
Q 013008 116 DADWIKAVVDQANVL-TH--VSNMYYSIPQIELAKRLVACSF-----ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSK 187 (451)
Q Consensus 116 ~p~v~~a~~~~~~~~-~~--~~~~~~~~~~~~l~~~l~~~~~-----~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~ 187 (451)
+.-|.+++.+.+... .+ +.+++.......|+++++++++ .++|++|+|+.+|+..++....
T Consensus 46 P~fv~ea~~~~~~~~~~~qYt~~~G~p~L~~aL~k~~se~~~~~~~~~~eVlVT~GA~~ai~~~~~~l~----------- 114 (420)
T KOG0257|consen 46 PKFVTEAAKNAAKEPSTNQYTRGYGLPQLRKALAKAYSEFYGGLLDPDDEVLVTAGANEAISSALLGLL----------- 114 (420)
T ss_pred cHHHHHHHHHHhccchhccccccCCchHHHHHHHHHHHHHhccccCCcccEEEecCchHHHHHHHHHHc-----------
Confidence 344778888888764 22 1233344557888888888665 5679999999999999999777
Q ss_pred CCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEee-CCCHHHHHHhcCCCCeEEEEEccccCCCCccccCH
Q 013008 188 EPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVE-YGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATK 266 (451)
Q Consensus 188 ~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~ 266 (451)
+++|.||+++|.|..+.......++.+.+...- +....+..-. ..|.+.||..+.....+.|++.|.|+.| -+.++
T Consensus 115 ~~GDeVii~eP~fd~Y~~~~~maG~tpv~v~~~-~~~g~~~s~~~~~D~~~le~~~t~kTk~Ii~ntPhNPtG--kvfsR 191 (420)
T KOG0257|consen 115 NPGDEVIVFEPFFDCYIPQVVMAGGTPVFVPLK-PKEGNVSSSDWTLDPEELESKITEKTKAIILNTPHNPTG--KVFSR 191 (420)
T ss_pred CCCCEEEEecCcchhhhhHHhhcCCcceeeccc-cccccccCccccCChHHHHhhccCCccEEEEeCCCCCcC--cccCH
Confidence 379999999999999988877777665543211 1111111101 1389999999987555556666665554 46799
Q ss_pred HHHHHHHHHHHHhCCEEEEeccccCCCcccc---ccccc--ccCCCcceeeecccccC-CcccccccccHHHHhhccCCC
Q 013008 267 EFLQFLRDACDDAGALLVFDEVQCGLGRTGY---LWAHE--HYGIFPDIMTLAKPLAG-GLPIGAALVTEKVASAINYGD 340 (451)
Q Consensus 267 ~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~---~~~~~--~~~~~pdi~t~sK~lg~-G~~iG~v~~~~~i~~~~~~~~ 340 (451)
++|++|++||++||+++|+||||.-+-..|. .++.. .+.++..+.++||+++. ||++||+++++.++....+..
T Consensus 192 eeLe~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~aslPgm~ertitvgS~gKtf~~TGWrlGW~igp~~L~~~~~~vh 271 (420)
T KOG0257|consen 192 EELERIAELCKKHGLLVISDEVYEWLVYDGNKHIRIASLPGMYERTITVGSFGKTFGVTGWRLGWAIGPKHLYSALFPVH 271 (420)
T ss_pred HHHHHHHHHHHHCCEEEEEhhHhHHHhhCCCcceeeecCCchhheEEEeccccceeeeeeeeeeeeechHHhhhhHHHHh
Confidence 9999999999999999999999977656663 23322 22345556689999995 999999999999998887666
Q ss_pred ccCCCCCcHHHHHHHHHHHHHhc---C-h--HHHHH--------------HHhCCCCcceeccc-ceeEEEEec------
Q 013008 341 HGSTFAGSPLVCNAAIAVLDKIS---N-P--AFLAS--------------KLARNPHVKDVRGL-GLIIGIEFD------ 393 (451)
Q Consensus 341 ~~~t~~~~~~~~aaa~aal~~~~---~-~--~~~~~--------------~~~~~~~~~~v~g~-G~~~~~~~~------ 393 (451)
....+..+...+.|..+++..-. . . .+... .++.+ .+...-+. +.+++.++.
T Consensus 272 ~~~~~~~~Tp~q~A~a~a~~~~~~~~~p~~~y~~~~~~~~y~~krdil~k~L~~l-g~~v~~p~gayyl~adfs~~~~~~ 350 (420)
T KOG0257|consen 272 QNFVFTCPTPIQEASAAAFALELACLQPGGSYFITELVKEYKEKRDILAKALEEL-GLKVTGPEGAYYLWADFSLAKSWP 350 (420)
T ss_pred hccccccCcHHHHHHHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHhc-CCccccCCCceEEEEeccccccCC
Confidence 66677777777777766665322 1 1 12221 22333 22223344 456666663
Q ss_pred --------CChHHHHHHHHH-CCceeeecCC----------CCEEEEeCCCCCCHHHHHHHHHHHH
Q 013008 394 --------VSATPVVDACRD-SGLLVLTAGK----------GNVVRLVPPLIISEQELDQAVEILC 440 (451)
Q Consensus 394 --------~~~~~~~~~l~~-~Gv~~~~~~~----------~~~iri~~~~~~t~e~i~~~l~~l~ 440 (451)
.+...++..+.+ .|+.+.|... ++.+|+ .++-++|.++.++++|+
T Consensus 351 ~~~~~~~~~~d~~~~~wl~~~~Gv~~IP~saF~s~~~~~~~~~~~r~--~~~k~~~~L~~a~e~l~ 414 (420)
T KOG0257|consen 351 FFEEILEKPDDFKFVRWLIKEGGVVVIPPSAFGSREHIKVAERLVRF--CFCKADETLRKAIERLK 414 (420)
T ss_pred cchhhccCCCceeeehhhhccCcEEEeCchhcCCchhhHHHHHHHHH--HHHhhHHHHHHHHHHHh
Confidence 012235666664 4777665421 123344 45567777777777776
No 178
>PRK03321 putative aminotransferase; Provisional
Probab=99.91 E-value=1e-22 Score=201.61 Aligned_cols=308 Identities=19% Similarity=0.180 Sum_probs=204.2
Q ss_pred EEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHhhccC--CCeEEecCCHHHHHHHHHHHHH
Q 013008 99 EYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSF--ADRVFFSNTGTEANEAAIKFAR 176 (451)
Q Consensus 99 ~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~e~v~~~~sG~eA~~~al~~a~ 176 (451)
.+|||..+.. .+| .+|.+.+++.+.+..... ++.....++.+.++++++ .++|++++|.++++..+++...
T Consensus 23 ~~i~l~~~~~--~~~-~~~~~~~a~~~~~~~~~~----y~~~g~~~lr~~ia~~~~~~~~~I~~~~G~~~~l~~~~~~~~ 95 (352)
T PRK03321 23 GAIKLSSNET--PFG-PLPSVRAAIARAAAGVNR----YPDMGAVELRAALAEHLGVPPEHVAVGCGSVALCQQLVQATA 95 (352)
T ss_pred cceeccCCCC--CCC-CCHHHHHHHHHHHHhcCc----CCCCcHHHHHHHHHHHhCcCHHHEEECCCHHHHHHHHHHHhc
Confidence 4789888765 354 467899999887764322 233346778888888876 5689999999988888877543
Q ss_pred HHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEcccc
Q 013008 177 KFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQ 256 (451)
Q Consensus 177 ~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~~ 256 (451)
.+++.|++..|+|..+.... ...+..... .+..+.. ..|++++++.+++ ++++|+++.++
T Consensus 96 -----------~~gd~Vli~~p~y~~~~~~~-~~~g~~~~~---v~~~~~~----~~~~~~l~~~~~~-~~~~v~l~~p~ 155 (352)
T PRK03321 96 -----------GPGDEVIFAWRSFEAYPILV-QVAGATPVQ---VPLTPDH----THDLDAMAAAITD-RTRLIFVCNPN 155 (352)
T ss_pred -----------CCCCEEEeCCCCHHHHHHHH-HHcCCEEEE---ccCCCCC----CCCHHHHHHhhcc-CCCEEEEeCCC
Confidence 16899999999986543222 222211111 1111110 1278999998865 45555555555
Q ss_pred CCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCccccc-ccccccCCCccee---eeccccc-CCcccccccccHH
Q 013008 257 GEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYL-WAHEHYGIFPDIM---TLAKPLA-GGLPIGAALVTEK 331 (451)
Q Consensus 257 ~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~-~~~~~~~~~pdi~---t~sK~lg-~G~~iG~v~~~~~ 331 (451)
+++|.+. +.+.+.++++.| ++++++|+||+|.+|.+.+.. .........++++ +|||.+| .|+|+||++++++
T Consensus 156 NPtG~~~-~~~~l~~l~~~~-~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~~ 233 (352)
T PRK03321 156 NPTGTVV-TPAELARFLDAV-PADVLVVLDEAYVEYVRDDDVPDGLELVRDHPNVVVLRTFSKAYGLAGLRVGYAVGHPE 233 (352)
T ss_pred CCcCCCc-CHHHHHHHHHhC-CCCeEEEEechHHHhccCcCCCcHHHHHhhCCCEEEEecchHHhhhHHHhhhhhcCCHH
Confidence 5666654 555555555544 369999999999887544321 1122222234444 7899998 6999999999999
Q ss_pred HHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH-------------HHhCCCCcceecccceeEEEEecCChHH
Q 013008 332 VASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS-------------KLARNPHVKDVRGLGLIIGIEFDVSATP 398 (451)
Q Consensus 332 i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~-------------~~~~~~~~~~v~g~G~~~~~~~~~~~~~ 398 (451)
+++.+... ..+++.+++++.++.++|+. .+.+.++ .++... +...+..|.++++.+.....+
T Consensus 234 ~~~~~~~~--~~~~~~s~~~q~~a~~~l~~--~~~~~~~~~~~~~~r~~~~~~L~~~~-~~~~~~~g~~i~i~l~~~~~~ 308 (352)
T PRK03321 234 VIAALRKV--AVPFSVNSLAQAAAIASLAA--EDELLERVDAVVAERDRVRAALRAAG-WTVPPSQANFVWLPLGERTAD 308 (352)
T ss_pred HHHHHHHh--cCCCCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHCC-CccCCCCCCEEEEeCCCCHHH
Confidence 99988643 35677889999888888752 1222221 122222 222345688888887555778
Q ss_pred HHHHHHHCCceeeecCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q 013008 399 VVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTLP 444 (451)
Q Consensus 399 ~~~~l~~~Gv~~~~~~~~~~iri~~~~~~t~e~i~~~l~~l~~~l~ 444 (451)
+.+.|.++||.+.+.+. +.+|+++ .+.+++++++++|+++++
T Consensus 309 ~~~~l~~~gI~v~~~~~-~~iRi~~---~~~~~~~~~~~al~~~~~ 350 (352)
T PRK03321 309 FAAAAAEAGVVVRPFAG-EGVRVTI---GAPEENDAFLRAARAWRA 350 (352)
T ss_pred HHHHHHHCCEEEEccCC-CcEEEee---CCHHHHHHHHHHHHHHhc
Confidence 99999999999998654 5689864 488999999999998764
No 179
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.91 E-value=1.2e-21 Score=197.24 Aligned_cols=325 Identities=18% Similarity=0.170 Sum_probs=202.7
Q ss_pred CCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcc-cccCCCCCHHHHHHHHHHhhc---cCCCeEEecCCHHHHHHHHH
Q 013008 97 GREYLDLSSGIAVNALGHGDADWIKAVVDQANVLT-HVSNMYYSIPQIELAKRLVAC---SFADRVFFSNTGTEANEAAI 172 (451)
Q Consensus 97 G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~~---~~~e~v~~~~sG~eA~~~al 172 (451)
|..++||..|... ++ .++.+.+++.+...... +....+..+.+.++++.+... ...++|++|+|+++|+..++
T Consensus 29 ~~~~i~l~~~~~~--~~-~~~~~~~a~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~i~~t~G~~~al~~~~ 105 (397)
T PRK07568 29 GIKVYHLNIGQPD--IK-TPEVFFEAIKNYDEEVLAYSHSQGIPELREAFAKYYKKWGIDVEPDEILITNGGSEAILFAM 105 (397)
T ss_pred CCCEEEecCCCCC--CC-CCHHHHHHHHHHhcCCcCcCCCCCCHHHHHHHHHHHHHhCCCCCcceEEEcCChHHHHHHHH
Confidence 3457787776542 32 36778888877554321 111111222344455444321 12679999999999999998
Q ss_pred HHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEE
Q 013008 173 KFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFV 252 (451)
Q Consensus 173 ~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ 252 (451)
+... .++++|++.+|+|+.+..... ..+..... .+...+.. ....|++.|++++.++...++++
T Consensus 106 ~~l~-----------~~gd~Vl~~~p~y~~~~~~~~-~~g~~~~~---v~~~~~~g-~~~~~~~~l~~~~~~~~~~v~i~ 169 (397)
T PRK07568 106 MAIC-----------DPGDEILVPEPFYANYNGFAT-SAGVKIVP---VTTKIEEG-FHLPSKEEIEKLITPKTKAILIS 169 (397)
T ss_pred HHhc-----------CCCCEEEEecCCCccHHHHHH-HcCCEEEE---eecCcccC-CCCCCHHHHHHhcCccceEEEEE
Confidence 8653 168899999999987643322 22211110 11110000 01125788999886533334445
Q ss_pred ccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCccccc-ccc-cccCCCcce---eeeccccc-CCcccccc
Q 013008 253 EPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYL-WAH-EHYGIFPDI---MTLAKPLA-GGLPIGAA 326 (451)
Q Consensus 253 ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~-~~~-~~~~~~pdi---~t~sK~lg-~G~~iG~v 326 (451)
.|. +++| ..++.+.+++|.++|+++|+++|+||+|.+|.+.+.. ... ...+..+.+ .+|||.++ .|+|+||+
T Consensus 170 ~p~-NPtG-~~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~~ 247 (397)
T PRK07568 170 NPG-NPTG-VVYTKEELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSALSLEGLEDRVIIIDSVSKRYSACGARIGCL 247 (397)
T ss_pred CCC-CCCC-ccCCHHHHHHHHHHHHHCCcEEEEeccchhcccCCCCccChhhcCCCcCCEEEEecchhhccCCCcceEEE
Confidence 554 4445 4678899999999999999999999999988555531 111 111222333 37999998 59999999
Q ss_pred ccc-HHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH--------------HHhCCCCcceeccc-ceeEEE
Q 013008 327 LVT-EKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS--------------KLARNPHVKDVRGL-GLIIGI 390 (451)
Q Consensus 327 ~~~-~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~--------------~~~~~~~~~~v~g~-G~~~~~ 390 (451)
+++ +++++.+..... .+++.+++.+.++.++|+. .+.+.++ .++.++.+....+. |+++|+
T Consensus 248 ~~~~~~~~~~~~~~~~-~~~~~s~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~g~~~~~~ 324 (397)
T PRK07568 248 ISKNKELIAAAMKLCQ-ARLSPPTLEQIGAAALLDT--PESYFDEVREEYKKRRDILYEELNKIPGVVCEKPKGAFYIIA 324 (397)
T ss_pred ecCCHHHHHHHHHHhh-ccCCCCcHHHHHHHHHhhC--CHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCcceEEEE
Confidence 984 778876643222 2467788888888887763 1222222 23344434333344 456777
Q ss_pred Eec-CChHHHHHHHHH------CCceeeecC--------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHh
Q 013008 391 EFD-VSATPVVDACRD------SGLLVLTAG--------KGNVVRLVPPLIISEQELDQAVEILCKTLPVLD 447 (451)
Q Consensus 391 ~~~-~~~~~~~~~l~~------~Gv~~~~~~--------~~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~~ 447 (451)
.+. .+..++.+.|++ +||.+.|+. ..+.+|+++ ..+++++++++++|.+++++..
T Consensus 325 ~l~~~~~~~~~~~l~~~~~~~~~gv~v~pg~~f~~~~~~~~~~iRls~--~~~~~~~~~~~~~l~~~l~~~~ 394 (397)
T PRK07568 325 KLPVDDAEDFAKWLLTDFNYNGETVMVAPASGFYATPGLGKNEIRIAY--VLNEEDLKRAMEILKEALEKYN 394 (397)
T ss_pred ecCCCCHHHHHHHHHhhcccccceEEEeCchHhcCCCCCCCCeEEEEE--eCCHHHHHHHHHHHHHHHHHhh
Confidence 774 346778888875 599998852 125788865 4678999999999999998754
No 180
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=99.91 E-value=1.3e-21 Score=182.82 Aligned_cols=325 Identities=16% Similarity=0.171 Sum_probs=221.4
Q ss_pred CEEEeeccCcccccCCC--CCHHHHHHHHHHHhhccc---ccCCCCCHHHHHHHHHHhhccC----CCeEEecCCHHHHH
Q 013008 98 REYLDLSSGIAVNALGH--GDADWIKAVVDQANVLTH---VSNMYYSIPQIELAKRLVACSF----ADRVFFSNTGTEAN 168 (451)
Q Consensus 98 ~~~iD~~~~~~~~~lG~--~~p~v~~a~~~~~~~~~~---~~~~~~~~~~~~l~~~l~~~~~----~e~v~~~~sG~eA~ 168 (451)
+.+|-+..|..+. +|- ..++..+|+.++++.... .+..+....+.++++++.+..+ .++|++|+|.++|+
T Consensus 61 k~iipl~~GDPsv-~~~~~ts~~a~~Av~~al~Sgk~N~Yaps~G~~~AR~AVAeYl~~~l~~kl~a~DV~ltsGC~qAI 139 (447)
T KOG0259|consen 61 KPILPLGHGDPSV-YPCFRTSQEAEQAVVDALRSGKGNGYAPSVGILPARRAVAEYLNRDLPNKLTADDVVLTSGCSQAI 139 (447)
T ss_pred ceeccCCCCCCCc-cccccCCHHHHHHHHHHHhcCCCCCcCCccccHHHHHHHHHHhhcCCCCccCcCceEEeccchHHH
Confidence 5777777776643 442 567888999998876432 1222233447788888776654 78999999999999
Q ss_pred HHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCC-eeEeeCCCHHHHHHhcCCCCe
Q 013008 169 EAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPG-VNFVEYGNIEATRKLIQPGKT 247 (451)
Q Consensus 169 ~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~le~~l~~~~~ 247 (451)
+.++.++. +++..|+++.|+|.-+...+....-..+ .| .+.|+ -+.+ |++.+|.++++.+.
T Consensus 140 e~~i~~LA-----------~p~aNILlPrPGfp~Y~~~a~~~~lEVR---~y-dlLPe~~weI---DL~~veal~DENT~ 201 (447)
T KOG0259|consen 140 ELAISSLA-----------NPGANILLPRPGFPLYDTRAIYSGLEVR---YY-DLLPEKDWEI---DLDGVEALADENTV 201 (447)
T ss_pred HHHHHHhc-----------CCCCceecCCCCCchHHHhhhhcCceeE---ee-cccCccccee---chHHHHHhhccCee
Confidence 99999665 2788999999999765433322211111 11 11122 1222 89999999988788
Q ss_pred EEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccc-ccccc-CCCccee--eeccccc-CCcc
Q 013008 248 AAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLW-AHEHY-GIFPDIM--TLAKPLA-GGLP 322 (451)
Q Consensus 248 aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~-~~~~~-~~~pdi~--t~sK~lg-~G~~ 322 (451)
|.|+++|.|+.|+ +++.+-|++|+++|+|+|+++|.||||..+-+.+..| ....+ .+.|-++ .+||.+- .|||
T Consensus 202 AivviNP~NPcGn--Vys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~~pfvpmg~fssiVPVitlggisKrW~VPGWR 279 (447)
T KOG0259|consen 202 AIVVINPNNPCGN--VYSEDHLKKIAETAKKLGIMVIADEVYGHTVFGDKPFVPMGKFSSIVPVITLGGISKRWIVPGWR 279 (447)
T ss_pred EEEEeCCCCCCcc--cccHHHHHHHHHHHHHhCCeEEehhhcceeecCCCCccchhhccccCceEeecccccccccCCce
Confidence 9999999988875 5899999999999999999999999997664445433 23333 3455443 4678765 7999
Q ss_pred cccccccHH--HH------hhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH--------------HHhCCCCcc-
Q 013008 323 IGAALVTEK--VA------SAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS--------------KLARNPHVK- 379 (451)
Q Consensus 323 iG~v~~~~~--i~------~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~--------------~~~~~~~~~- 379 (451)
+||++..+. ++ +.+.. ...-+.+.+.+.|+|.-.-|+.- .+++.+. .++.+|++.
T Consensus 280 lGWi~~hD~~gvf~~~~~~q~~~~-~~~~~~~p~TiiQ~AlP~IL~kT-p~efF~k~~~~lk~na~l~y~~Lk~IP~l~c 357 (447)
T KOG0259|consen 280 LGWIALHDPRGVFRDTKVVQGIKN-FLDIIPGPATIIQGALPDILEKT-PEEFFDKKLSFLKSNADLCYSRLKDIPCLTC 357 (447)
T ss_pred eeeEEEecccccccchHHHHHHHH-HHhccCCccHhHHHHhHHHHHhC-hHHHHHHHHHHHHhhHHHHHHHHhcCCCccc
Confidence 999986421 11 22211 11223445667777777666632 2333333 567888776
Q ss_pred eecccceeEEE-Eec-------CChHHHHHHHH-HCCceeeecC---CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHh
Q 013008 380 DVRGLGLIIGI-EFD-------VSATPVVDACR-DSGLLVLTAG---KGNVVRLVPPLIISEQELDQAVEILCKTLPVLD 447 (451)
Q Consensus 380 ~v~g~G~~~~~-~~~-------~~~~~~~~~l~-~~Gv~~~~~~---~~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~~ 447 (451)
.++++|.|+.+ .++ .+..+|+++|. |+.+++.|+. ..+++|+ .++...+.++++++||++..++-.
T Consensus 358 p~kPeg~mylmv~l~~s~~~~~~dD~dFc~kL~~Eesv~~LPG~af~~~nw~Ri--~i~~~~~~leea~~Rik~Fc~RH~ 435 (447)
T KOG0259|consen 358 PVKPEGCMYLMVKLNLSLFPDIEDDVDFCQKLAREESVICLPGQAFGLKNWLRI--VITVEEEMLEEAFSRIKEFCDRHS 435 (447)
T ss_pred CcCCCcceEEEeccchhhhccccccHHHHHHHhhhcceEEeccccccCCCeEEE--EEccChHHHHHHHHHHHHHHHhhh
Confidence 67888876543 332 34567888886 5688888874 3588888 567789999999999999887643
No 181
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.91 E-value=4e-22 Score=205.05 Aligned_cols=311 Identities=11% Similarity=0.076 Sum_probs=195.1
Q ss_pred CHHHHHHHHHHHhhcccccC-----CCCCHHHHHHHHHHhhccC----CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCC
Q 013008 116 DADWIKAVVDQANVLTHVSN-----MYYSIPQIELAKRLVACSF----ADRVFFSNTGTEANEAAIKFARKFQRHSNPDS 186 (451)
Q Consensus 116 ~p~v~~a~~~~~~~~~~~~~-----~~~~~~~~~l~~~l~~~~~----~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~ 186 (451)
+..+.+++.+.++....... .+..+.++.+++++.+..+ .++|++|+|+++|+..+++++..
T Consensus 90 P~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~--------- 160 (481)
T PTZ00377 90 PADVVARAKEYLNAIGGGTGAYTDSAGYPFVRKAVAAFIERRDGVPKDPSDIFLTDGASSGIKLLLQLLIG--------- 160 (481)
T ss_pred CHHHHHHHHHHHHhCCCcccCcCcccCCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhcc---------
Confidence 44677777766654321111 1122335666666665433 67999999999999999997641
Q ss_pred CCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCC-----CCeE-EEEEccccCCCC
Q 013008 187 KEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQP-----GKTA-AVFVEPIQGEGG 260 (451)
Q Consensus 187 ~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~-----~~~a-avi~ep~~~~~G 260 (451)
+++|.|++.+|+|+++.......+..... .+..++..+- -|+++|++.+.+ .+++ ++++.|. +++|
T Consensus 161 -~~gD~Vlv~~P~y~~y~~~~~~~g~~~v~----v~~~~~~~~~--~d~~~l~~~l~~~~~~~~~~k~l~l~~P~-NPTG 232 (481)
T PTZ00377 161 -DPSDGVMIPIPQYPLYSAAITLLGGKQVP----YYLDEEKGWS--LDQEELEEAYEQAVRNGITPRALVVINPG-NPTG 232 (481)
T ss_pred -CCCCEEEECCCCchhHHHHHHHcCCEEEE----EEeccccCCC--CCHHHHHHHHHHHHhcCCCeeEEEEECCC-CCCC
Confidence 15899999999999886554443322211 1111110000 178999988852 1455 4556554 4445
Q ss_pred ccccCHHHHHHHHHHHHHhCCEEEEeccccCCCccc-ccc-cccc--cCCCc------ce---eeecccc-c-CCccccc
Q 013008 261 IYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTG-YLW-AHEH--YGIFP------DI---MTLAKPL-A-GGLPIGA 325 (451)
Q Consensus 261 ~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G-~~~-~~~~--~~~~p------di---~t~sK~l-g-~G~~iG~ 325 (451)
.+++.+.+++|+++|++||++||+||+|..+.+.+ ..+ .... .++.+ .+ -+|||++ + .|+|+||
T Consensus 233 -~~~s~e~~~~i~~~a~~~~~~iI~De~Y~~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG~ 311 (481)
T PTZ00377 233 -QVLTRDVMEEIIKFCYEKGIVLMADEVYQENIYDGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRGGY 311 (481)
T ss_pred -cCCCHHHHHHHHHHHHHCCCEEEEehhhHhhccCCCCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCceEE
Confidence 46799999999999999999999999998764422 111 1100 11111 23 3689986 5 5999999
Q ss_pred ccc---cHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhc---C--hHH-----------HHH------HHhCCCCcce
Q 013008 326 ALV---TEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKIS---N--PAF-----------LAS------KLARNPHVKD 380 (451)
Q Consensus 326 v~~---~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~---~--~~~-----------~~~------~~~~~~~~~~ 380 (451)
+++ ++++++.+.... ..+++.|++++.++.++|+... . +.+ .++ .++.++.+..
T Consensus 312 ~~~~~~p~~li~~l~~~~-~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~g~~~ 390 (481)
T PTZ00377 312 FELTNIPPEVREQIYKLA-SINLCSNVVGQLMTGLMCNPPREGDASYPLYKRERDAIFTSLKRRAELLTDELNKIEGVSC 390 (481)
T ss_pred EEEeCCCHHHHHHHHHHh-heecCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEe
Confidence 986 899988876433 2345678899999988885210 0 011 111 3344555554
Q ss_pred eccc-ceeEEEEecC--------------ChHHHHHH-HHHCCceeeecCC------CCEEEEeCCCCCCHHHHHHHHHH
Q 013008 381 VRGL-GLIIGIEFDV--------------SATPVVDA-CRDSGLLVLTAGK------GNVVRLVPPLIISEQELDQAVEI 438 (451)
Q Consensus 381 v~g~-G~~~~~~~~~--------------~~~~~~~~-l~~~Gv~~~~~~~------~~~iri~~~~~~t~e~i~~~l~~ 438 (451)
..+. |+++|+.+.. ....++.. |.++||.+.|+.. .+++|++.. .++|++++++++
T Consensus 391 ~~p~gg~fl~~~~~l~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~F~~~~~~~~~Rls~~--~~~e~l~~~l~r 468 (481)
T PTZ00377 391 QPVEGAMYAFPRIELPEKAIQEAKERGLAPDVLYCLELLESTGIVVVPGSGFGQKPGTYHFRITIL--PPEEQIEEMVKK 468 (481)
T ss_pred ecCCeeEEEEeeccCchhhHHHHHhcCCCcHHHHHHHHHHHcCEEEeCCcccCCCCCCCEEEEEEC--CCHHHHHHHHHH
Confidence 5554 4666655421 12234444 4567999998642 147888654 788999999999
Q ss_pred HHHHHHHHh
Q 013008 439 LCKTLPVLD 447 (451)
Q Consensus 439 l~~~l~~~~ 447 (451)
|.+++++..
T Consensus 469 l~~~~~~~~ 477 (481)
T PTZ00377 469 IKEFHESFM 477 (481)
T ss_pred HHHHHHHHH
Confidence 999988754
No 182
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.90 E-value=5e-22 Score=198.01 Aligned_cols=309 Identities=20% Similarity=0.187 Sum_probs=201.3
Q ss_pred CCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHhhccC--CCeEEecCCHHHHHHHHHHH
Q 013008 97 GREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSF--ADRVFFSNTGTEANEAAIKF 174 (451)
Q Consensus 97 G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~e~v~~~~sG~eA~~~al~~ 174 (451)
+..++||..|.. ++| .+|.+.+++.+....... |+...-.+|.+.++++++ .++|++++|+++++..++++
T Consensus 35 ~~~~i~l~~~~~--~~~-~~~~~~~al~~~~~~~~~----Y~~~~g~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~ 107 (371)
T PRK05166 35 VPRIAKLGSNEN--PLG-PSPAVRRAFADIAELLRL----YPDPQGRALREAIAARTGVPADRIILGNGSEDLIAVICRA 107 (371)
T ss_pred CcceEEcCCCCC--CCC-CCHHHHHHHHHHHHHhhc----CCCCcHHHHHHHHHHHhCcCHHHEEEcCCHHHHHHHHHHH
Confidence 447899998865 355 678899988875544221 222222378888888876 67899999999999988886
Q ss_pred HHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEcc
Q 013008 175 ARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEP 254 (451)
Q Consensus 175 a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep 254 (451)
+. +++|.|++.+|+|.++....... |..... .+..++.. -|++++++.+++. +++|++..
T Consensus 108 ~~-----------~~gd~vli~~P~y~~~~~~~~~~-g~~~~~---v~~~~~~~----~~~~~l~~~~~~~-~~~v~l~~ 167 (371)
T PRK05166 108 VL-----------RPGDRVVTLYPSFPLHEDYPTMM-GARVER---VTVTPDLG----FDLDALCAAVARA-PRMLMFSN 167 (371)
T ss_pred hc-----------CCCCEEEEcCCChHHHHHHHHHc-CCeEEE---eecCCCCC----CCHHHHHHhhhcC-CCEEEEeC
Confidence 54 16899999999998764332222 211100 11111111 1789999988653 34444433
Q ss_pred ccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCccccc-cccccc-CC---Ccceeeeccccc-CCcccccccc
Q 013008 255 IQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYL-WAHEHY-GI---FPDIMTLAKPLA-GGLPIGAALV 328 (451)
Q Consensus 255 ~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~-~~~~~~-~~---~pdi~t~sK~lg-~G~~iG~v~~ 328 (451)
.++++|. .++.+.+++|.++|++ ++++|+||+|..|-..+.. ...... .. ..-+.+|||.++ +|+|+||+++
T Consensus 168 p~NPtG~-~~~~~~~~~l~~~~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i~ 245 (371)
T PRK05166 168 PSNPVGS-WLTADQLARVLDATPP-ETLIVVDEAYAEYAAGDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLV 245 (371)
T ss_pred CCCCCCC-CCCHHHHHHHHHhCCC-CcEEEEECcHHHhcCCcCcccHHHHHhhcCCCEEEEeechHhhhcchhheeeeec
Confidence 3444554 5788889999999875 8999999999877422211 111111 11 122347999999 7999999765
Q ss_pred -cHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH--------------HHhCCCCcceecccceeEEEEec
Q 013008 329 -TEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS--------------KLARNPHVKDVRGLGLIIGIEFD 393 (451)
Q Consensus 329 -~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~--------------~~~~~~~~~~v~g~G~~~~~~~~ 393 (451)
++++++.+.... ..++.|.+++.++.+++. ..++.++ .++.++ +...++.|.++|+.+.
T Consensus 246 ~~~~l~~~~~~~~--~~~~~~~~~q~~~~~~l~---~~~~~~~~~~~~~~~r~~l~~~L~~~g-~~~~p~~g~fl~~~~~ 319 (371)
T PRK05166 246 SDPELVGLLDRVR--TPFNVNGAAQAAALAALD---DEEHLAKGVALALAERERLKKELAEMG-YRIAPSRANFLFFDAR 319 (371)
T ss_pred CCHHHHHHHHHhc--cCCCCCHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHHHHCc-CeeCCCcCCEEEEeCC
Confidence 788888775322 346678888888887775 2222222 223333 2334567889888875
Q ss_pred CChHHHHHHHHHCCceeeecCC---CCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 013008 394 VSATPVVDACRDSGLLVLTAGK---GNVVRLVPPLIISEQELDQAVEILCKTL 443 (451)
Q Consensus 394 ~~~~~~~~~l~~~Gv~~~~~~~---~~~iri~~~~~~t~e~i~~~l~~l~~~l 443 (451)
.+..++.+.|.++||.+.|+.. .+++|+++. +.++.+++++.|++++
T Consensus 320 ~~~~~l~~~l~~~gi~v~p~~~~~~~~~iRi~~~---~~~~~~~l~~~l~~i~ 369 (371)
T PRK05166 320 RPASAVAEALLRQGVIVKPWKQPGFETFIRVSIG---SPEENDHFVAALDKVL 369 (371)
T ss_pred CCHHHHHHHHHHCCeEEecCCCCCCCCeEEEEcC---CHHHHHHHHHHHHHHh
Confidence 5678899999999999988632 367888654 5666777777777654
No 183
>PRK08354 putative aminotransferase; Provisional
Probab=99.90 E-value=9.1e-22 Score=191.34 Aligned_cols=293 Identities=14% Similarity=0.077 Sum_probs=191.3
Q ss_pred CCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHhhccCCCeEEecCCHHHHHHHHHHHH
Q 013008 96 EGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFA 175 (451)
Q Consensus 96 ~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~e~v~~~~sG~eA~~~al~~a 175 (451)
+...+|||..|.. +++ +|.+.+++.+.++... .++. ...|.++++++++ ++|++|+|+++|+..++.++
T Consensus 6 ~~~~~i~l~~~~n--p~~--p~~~~~a~~~~~~~~~----~yp~--~~~l~~~ia~~~~-~~I~vt~G~~~al~~~~~~~ 74 (311)
T PRK08354 6 REEGLIDFSASVN--PYP--PEWLDEMFERAKEISG----RYTY--YEWLEEEFSKLFG-EPIVITAGITEALYLIGILA 74 (311)
T ss_pred CccceeEecCCCC--CCC--CHHHHHHHHHHHHHhh----cCCC--hHHHHHHHHHHHC-CCEEECCCHHHHHHHHHHhh
Confidence 3456899998743 443 5889999987765421 1222 3567888888877 57999999999998777533
Q ss_pred HHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEccc
Q 013008 176 RKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPI 255 (451)
Q Consensus 176 ~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~ 255 (451)
. +++.|++.+|+|.++...+...+... ..++ .|++.+++.+++ ...++++.|.
T Consensus 75 ~------------~gd~vlv~~P~y~~~~~~~~~~g~~~-------------~~~~-~d~~~l~~~~~~-~~~vi~~~P~ 127 (311)
T PRK08354 75 L------------RDRKVIIPRHTYGEYERVARFFAARI-------------IKGP-NDPEKLEELVER-NSVVFFCNPN 127 (311)
T ss_pred C------------CCCeEEEeCCCcHHHHHHHHHcCCEE-------------eecC-CCHHHHHHhhcC-CCEEEEecCC
Confidence 3 58899999999988865544333211 1111 378899888763 4467777885
Q ss_pred cCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccccccCCCcceeeeccccc-CCcccccccccHHHHh
Q 013008 256 QGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLA-GGLPIGAALVTEKVAS 334 (451)
Q Consensus 256 ~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~t~sK~lg-~G~~iG~v~~~~~i~~ 334 (451)
| ++| ...+.+.+++|.++|++||+++|+||+|.+|...+.. .. .....-+.+|||+++ .|+|+||+++ +.+
T Consensus 128 N-PTG-~~~~~~~l~~l~~~a~~~~~~li~De~y~~f~~~~~~--~~-~~~vi~~~S~SK~~~l~GlRiG~~v~---~~~ 199 (311)
T PRK08354 128 N-PDG-KFYNFKELKPLLDAVEDRNALLILDEAFIDFVKKPES--PE-GENIIKLRTFTKSYGLPGIRVGYVKG---FEE 199 (311)
T ss_pred C-CCC-CccCHHHHHHHHHHhhhcCcEEEEeCcchhccccccc--cC-CCcEEEEeccHhhcCCccceeeeeee---hHH
Confidence 4 444 4679999999999999999999999999888443321 11 222233458999999 7999999998 334
Q ss_pred hccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH----HH---hCCCCcceecccceeEEEEecCChHHHHHHHHHCC
Q 013008 335 AINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS----KL---ARNPHVKDVRGLGLIIGIEFDVSATPVVDACRDSG 407 (451)
Q Consensus 335 ~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~----~~---~~~~~~~~v~g~G~~~~~~~~~~~~~~~~~l~~~G 407 (451)
.++... ..+..+.++++++.+.++. ..+++++ +. +.+.......+.|.++++++. +..++++.|.++|
T Consensus 200 ~l~~~~--~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~-~~~~~~~~l~~~g 274 (311)
T PRK08354 200 AFRSVR--MPWSIGSTGYAFLEFLIED--DFEHLRKTMPLIWREKERFEKALYVKSDANFFIKDVG-DAEKFVEFLKRNG 274 (311)
T ss_pred HHHHcC--CCccCCHHHHHHHHHHHHh--HHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEECC-CHHHHHHHHHHCC
Confidence 443222 2344555666666555541 1111111 11 111111123466777777653 4678999999999
Q ss_pred ceeeecCC---CCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 013008 408 LLVLTAGK---GNVVRLVPPLIISEQELDQAVEILCKT 442 (451)
Q Consensus 408 v~~~~~~~---~~~iri~~~~~~t~e~i~~~l~~l~~~ 442 (451)
|.+.|+.. ++++||++. +.++.+++++.|++.
T Consensus 275 v~v~~g~~f~~~~~iRi~~~---~~~~~~~l~~al~~~ 309 (311)
T PRK08354 275 ILVRDCTSFGLPGYIRFSVR---DREENEKLIRALREW 309 (311)
T ss_pred eEEEecccCCCCCeEEEEeC---CHHHHHHHHHHHHHh
Confidence 99998743 367888644 555666666666653
No 184
>PLN02672 methionine S-methyltransferase
Probab=99.90 E-value=5.1e-22 Score=214.12 Aligned_cols=325 Identities=11% Similarity=0.110 Sum_probs=210.8
Q ss_pred EEEecCCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHhhccC--C---CeEEecCCHH
Q 013008 91 KLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSF--A---DRVFFSNTGT 165 (451)
Q Consensus 91 ~l~d~~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~---e~v~~~~sG~ 165 (451)
++.+.+|..+|++..|.. .++ .+|.+++++.+.+.+..+ ..+..+.+.++++++++.++ . ++|++++|++
T Consensus 690 ~~~~~~g~~vI~LsinE~--d~p-pPp~V~eAi~eal~~~~~--s~g~pdlr~aLa~~la~~~Gv~~d~~e~IIvt~Gs~ 764 (1082)
T PLN02672 690 SVSGSQESSLIHMDVDES--FLP-VPSAVKASIFESFVRQNI--SESETDPRPSILQFIKSNYGFPTDSCTEFVYGDTSL 764 (1082)
T ss_pred CCcccCCCCEEEEeCCCC--CCC-CCHHHHHHHHHHHhhcCC--CCCChHHHHHHHHHHHHHhCcCCCCCCEEEEeCCHH
Confidence 345557889999998866 455 788999999988765322 12234458899999998876 2 3799999999
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCC--CeeEeeCCCHHHHHHhcC
Q 013008 166 EANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMP--GVNFVEYGNIEATRKLIQ 243 (451)
Q Consensus 166 eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~d~~~le~~l~ 243 (451)
+++..++++.. .++|.|++.+|+|..+...+...+.... . .+..+ ++. .|++.|+++++
T Consensus 765 elL~lll~aLl-----------~pGD~VLVp~PtY~~Y~~~a~~~Ga~vv-~---Vpl~~e~gf~----lD~d~Le~al~ 825 (1082)
T PLN02672 765 ALFNKLVLCCV-----------QEGGTLCFPAGSNGTYVSAAKFLKANFR-R---IPTKSSDGFK----LTAKTLASTLE 825 (1082)
T ss_pred HHHHHHHHHHc-----------CCCCEEEEeCCChHHHHHHHHHcCCEEE-E---EecccccCCC----CCHHHHHHHhc
Confidence 99888888655 2689999999999888765544332211 1 12211 111 17889999986
Q ss_pred C-CCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccc---ccc----cc-CC-----Ccc
Q 013008 244 P-GKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLW---AHE----HY-GI-----FPD 309 (451)
Q Consensus 244 ~-~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~---~~~----~~-~~-----~pd 309 (451)
+ ....++++.|.++++| .+++++.+++|.++|++||++||+||+|.++-+.+... ... .+ .. ..-
T Consensus 826 ~~~~~~I~L~nPnhNPTG-~v~S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIv 904 (1082)
T PLN02672 826 TVKKPWVYISGPTINPTG-LLYSNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVAL 904 (1082)
T ss_pred cCCCCEEEEECcCCCCcC-ccCCHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEE
Confidence 4 3456788888745555 46899999999999999999999999998775544321 010 11 11 112
Q ss_pred eeeeccccc-CCccccccccc-HHHHhhccCCCc-cCCCCCcHHHHHHHHHHHHHhcChHH-----------HHH-----
Q 013008 310 IMTLAKPLA-GGLPIGAALVT-EKVASAINYGDH-GSTFAGSPLVCNAAIAVLDKISNPAF-----------LAS----- 370 (451)
Q Consensus 310 i~t~sK~lg-~G~~iG~v~~~-~~i~~~~~~~~~-~~t~~~~~~~~aaa~aal~~~~~~~~-----------~~~----- 370 (451)
+.+|||.++ +|+|+||++++ +++++.+..... ...+..+.+++++++++++. +..+| .++
T Consensus 905 L~SfSKkf~lpGLRIGylIap~~eLi~~l~~~~~~s~~~~~~q~Aaaaalall~~-~~~~~~~~l~e~r~~Lk~rRd~L~ 983 (1082)
T PLN02672 905 LGGLSTELLSGGHEFGFLALNDSVLIDAFHSAPGLSRPHSTLKYTIKKLLGLKNQ-KSSDLLDGVAEQKKILKSRAERLK 983 (1082)
T ss_pred EeCcHHhhccHHHHheeEEeCCHHHHHHHHHhhhhcCCCcHHHHHHHHHHHHHhc-cCcHHHHHHHHHHHHHHHHHHHHH
Confidence 237899998 58999999986 458887754211 11112233344444433310 11111 111
Q ss_pred -HHhCCCCcceeccc-ceeEEEEec-------------------CChHHHHHHHHHC-CceeeecCC---CCEEEEeCCC
Q 013008 371 -KLARNPHVKDVRGL-GLIIGIEFD-------------------VSATPVVDACRDS-GLLVLTAGK---GNVVRLVPPL 425 (451)
Q Consensus 371 -~~~~~~~~~~v~g~-G~~~~~~~~-------------------~~~~~~~~~l~~~-Gv~~~~~~~---~~~iri~~~~ 425 (451)
.++.+ .+...++. |+++|+.+. .+..++++.|+++ ||.+.|+.. .+++||+ +
T Consensus 984 e~L~~~-Gi~v~~PeGGFfLwl~l~~~l~~~~~~~~~~~~~~~~lds~efae~LLee~GVaV~PGs~FG~~g~~RIs--f 1060 (1082)
T PLN02672 984 ETLEAC-GWDVLEPQGGISMVAKPSAYLGKTVKLKSIDGDTGIKLDSSNIREAILKSTGLCINSSSWTGIPGYCRFS--F 1060 (1082)
T ss_pred HHHHHC-CCeEecCCcEEEEEEEccccccccccccccccccccCCCHHHHHHHHHHcCCEEEecCcccCCCCeEEEE--e
Confidence 22333 23334454 556665431 1356799999976 999998632 3678885 4
Q ss_pred CCCHHHHHHHHHHHHHHHH
Q 013008 426 IISEQELDQAVEILCKTLP 444 (451)
Q Consensus 426 ~~t~e~i~~~l~~l~~~l~ 444 (451)
+.+++++++++++|.++++
T Consensus 1061 a~~~e~LeeALerL~kf~~ 1079 (1082)
T PLN02672 1061 ALEDSEFDRALKAIARFKE 1079 (1082)
T ss_pred cCCHHHHHHHHHHHHHHHH
Confidence 5689999999999998764
No 185
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.90 E-value=2.3e-22 Score=199.97 Aligned_cols=311 Identities=16% Similarity=0.138 Sum_probs=200.2
Q ss_pred EEEeeccCcccccCCCCCHHHHHHHHHHHh--hcccccCCC-CCHHHHHHHHHHhhccC--------CC-eEEecCCHHH
Q 013008 99 EYLDLSSGIAVNALGHGDADWIKAVVDQAN--VLTHVSNMY-YSIPQIELAKRLVACSF--------AD-RVFFSNTGTE 166 (451)
Q Consensus 99 ~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~--~~~~~~~~~-~~~~~~~l~~~l~~~~~--------~e-~v~~~~sG~e 166 (451)
++|||.+|.. .++++||.+.+++.+..+ ........| ......+|.+.++++++ .+ .+++++|..+
T Consensus 2 ~~I~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~~~~G~~~ 79 (363)
T PF00155_consen 2 DVINLGSNAP--LLLSQNPPPPAAIKAAIRGAATSSSFLGYPPPQGYPELREAIADFLGRRYGVPVDPEANILVTSGAQA 79 (363)
T ss_dssp TEEESSSSST--SSTTSSHHHHHHHHHHHHHHHHHTGCTSSTCTTHHHHHHHHHHHHHHHHHTHHTTGGEGEEEESHHHH
T ss_pred CEEEEECCCC--CCcccccchHHHHHHHHHHhhcccccccCCCchhhHHHHHHHHHHhhhccCcccccceEEEEeccccc
Confidence 5789998876 344456666665555443 111111223 23336777777777665 67 7888876666
Q ss_pred HHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEee-------CCCHHHHH
Q 013008 167 ANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVE-------YGNIEATR 239 (451)
Q Consensus 167 A~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~d~~~le 239 (451)
++..++.++. . .+++.|++.+|+|.++.......+ .. +..++ ..|+++|+
T Consensus 80 ~~~~~~~~~~--~--------~~~~~vlv~~P~y~~~~~~~~~~g-~~------------~~~~~~~~~~~~~~d~~~l~ 136 (363)
T PF00155_consen 80 ALFLLLRLLK--I--------NPGDTVLVPDPCYPSYIEAARLLG-AE------------VIPVPLDSENDFHLDPEALE 136 (363)
T ss_dssp HHHHHHHHHH--S--------STTSEEEEEESSSTHHHHHHHHTT-SE------------EEEEEEEETTTTEETHHHHH
T ss_pred chhhhhhccc--c--------cccccceecCCccccccccccccC-ce------------eeeccccccccccccccccc
Confidence 6666666553 1 158899999999987754443322 11 12222 23899999
Q ss_pred HhcCCC-----CeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccc-c-ccccCCCcc---
Q 013008 240 KLIQPG-----KTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLW-A-HEHYGIFPD--- 309 (451)
Q Consensus 240 ~~l~~~-----~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~-~-~~~~~~~pd--- 309 (451)
+.+++. ++.+|++..+++++|. .++.+.+++|.++|++||+++|+||+|.++......+ . .....-.++
T Consensus 137 ~~l~~~~~~~~~~~~v~~~~p~nPtG~-~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~ 215 (363)
T PF00155_consen 137 EALDELPSKGPRPKAVLICNPNNPTGS-VLSLEELRELAELAREYNIIIIVDEAYSDLIFGDPDFGPIRSLLDEDDNVIV 215 (363)
T ss_dssp HHHHTSHTTTETEEEEEEESSBTTTTB-B--HHHHHHHHHHHHHTTSEEEEEETTTTGBSSSSHTHHHHGHHTTTSTEEE
T ss_pred cccccccccccccceeeeccccccccc-ccccccccchhhhhcccccceeeeeceeccccCCCccCccccccccccccee
Confidence 988742 3466666666666665 5799999999999999999999999998763332211 1 112222233
Q ss_pred eeeeccccc-CCcccccccccHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcC-hHHHHH--------------HHh
Q 013008 310 IMTLAKPLA-GGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISN-PAFLAS--------------KLA 373 (451)
Q Consensus 310 i~t~sK~lg-~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~--------------~~~ 373 (451)
+-++||.+| .|+|+||+++++++++.++.... .+..+.+.++++.+++..... .++.++ .++
T Consensus 216 ~~S~SK~~g~~GlRvG~i~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~ 293 (363)
T PF00155_consen 216 VGSLSKSFGLPGLRVGYIVAPPELIERLRRFQR--SGLSSSPMQAAAAAALSDPELVEKWLEELRERLRENRDLLREALE 293 (363)
T ss_dssp EEESTTTTTSGGGTEEEEEEEHHHHHHHHHHHH--HTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeeccccccccccccccccchhhhhhhhhhccc--cccccchhhHHHHHhhhcccccccccccchhhHHHHHHHHHHHHH
Confidence 337899998 69999999999999988864332 222366777666666653221 112222 222
Q ss_pred CCCCcceec-ccceeEEEEecC-ChHHHHHHHHHC-CceeeecCC---CCEEEEeCCCCCCHHHHHHHHHHH
Q 013008 374 RNPHVKDVR-GLGLIIGIEFDV-SATPVVDACRDS-GLLVLTAGK---GNVVRLVPPLIISEQELDQAVEIL 439 (451)
Q Consensus 374 ~~~~~~~v~-g~G~~~~~~~~~-~~~~~~~~l~~~-Gv~~~~~~~---~~~iri~~~~~~t~e~i~~~l~~l 439 (451)
+. .+.... ..|.++++.++. +..++++.|+++ ||.+.|+.. .+.+|+++ ..+++|++++++++|
T Consensus 294 ~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gi~v~pg~~~~~~~~iRi~~-a~~~~e~~~~~~~~l 363 (363)
T PF00155_consen 294 EI-GITVLPPEAGFFLWVRLDPNDAEELAQELLEEYGILVRPGSYFGVPGYIRISL-ASHSEEDLEEALERL 363 (363)
T ss_dssp HT-TSEEEHHSBSSEEEEEESHHHHHHHHHHHHHHHTEEEEEGGGGTSTTEEEEEG-GCSCHHHHHHHHHHH
T ss_pred Hh-hhheeeccCccEEEEEcccchHHHHHHHHHHhCCEEEEecCCCCCCCEEEEEe-ccCCHHHHHHHHhhC
Confidence 22 232233 357777777753 367899999998 999998532 46899987 688999999999986
No 186
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.90 E-value=1.5e-21 Score=196.59 Aligned_cols=325 Identities=14% Similarity=0.164 Sum_probs=204.6
Q ss_pred CCCEEEeeccCcccc--cCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHhhccC--------CCeEEecCCHH
Q 013008 96 EGREYLDLSSGIAVN--ALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSF--------ADRVFFSNTGT 165 (451)
Q Consensus 96 ~G~~~iD~~~~~~~~--~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--------~e~v~~~~sG~ 165 (451)
.|..++||..|.... .+ ..++.+.+++.+.+..... ..+.......++.+.++++++ .+++++|+|++
T Consensus 29 ~~~~~i~l~~g~p~~~~~~-~~~~~~~~~~~~~l~~~~~-~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~ii~t~G~t 106 (403)
T TIGR01265 29 PEKPIIPLSHGDPSVFGNL-RTDPEAEEAVKDALRSGKF-NGYAPSVGALAAREAVAEYLSSDLPGKLTADDVVLTSGCS 106 (403)
T ss_pred cCCCeEEeCCCCCCccCCC-CCCHHHHHHHHHHHhcCCC-CCCCCCCCCHHHHHHHHHHHHhhcCCCCCHHHEEEecChH
Confidence 467889999887641 12 2568899999887764211 111112223334444444432 57899999999
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCC
Q 013008 166 EANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPG 245 (451)
Q Consensus 166 eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~ 245 (451)
+|+..+++++.. ++++|++.+|+|.++...+...+..... .+..+.... --|++.+++++.++
T Consensus 107 ~al~~~~~~l~~-----------~gd~Vlv~~p~y~~~~~~~~~~g~~~~~----~~~~~~~~~--~~d~~~l~~~~~~~ 169 (403)
T TIGR01265 107 QAIEICIEALAN-----------PGANILVPRPGFPLYDTRAAFSGLEVRL----YDLLPEKDW--EIDLDGLEALADEK 169 (403)
T ss_pred HHHHHHHHHhCC-----------CCCEEEEeCCCchhHHHHHHHcCCEEEE----ecCCcccCC--ccCHHHHHHHhCcC
Confidence 999999997651 5889999999997664433222211110 011110000 02789999988654
Q ss_pred CeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccc-cccccCC---Ccceeeeccccc-CC
Q 013008 246 KTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLW-AHEHYGI---FPDIMTLAKPLA-GG 320 (451)
Q Consensus 246 ~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~-~~~~~~~---~pdi~t~sK~lg-~G 320 (451)
...++++.|. ++.| ...+.+.+++|.++|+++|+++|+||+|.+|...+..+ ....+.- ..-+.+|||.++ .|
T Consensus 170 ~~~v~i~~p~-NPtG-~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pG 247 (403)
T TIGR01265 170 TVAIVVINPS-NPCG-SVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFIPMASFASIVPVLSLGGISKRWVVPG 247 (403)
T ss_pred ccEEEEecCC-CCCC-CCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCccchhhhccCCcEEEEeecccccCCCc
Confidence 4455555554 4455 46788899999999999999999999998885544321 1111111 122347999976 69
Q ss_pred ccccccccc--HH-----HHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH--------------HHhCCCCcc
Q 013008 321 LPIGAALVT--EK-----VASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS--------------KLARNPHVK 379 (451)
Q Consensus 321 ~~iG~v~~~--~~-----i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~--------------~~~~~~~~~ 379 (451)
+|+||++++ ++ +.+.+.... ..+++.+.+++.++.++|+. ..+.++++ .++.++.+.
T Consensus 248 lRiG~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 325 (403)
T TIGR01265 248 WRLGWIIIHDPHGIFRDTVLQGLKNLL-QRILGPATIVQGALPDILEN-TPQEFFDGKISVLKSNAELCYEELKDIPGLV 325 (403)
T ss_pred ceEEEEEEeCchhhhHHHHHHHHHHHh-hhhcCCChHHHHHHHHHHHh-ChHHHHHHHHHHHHHHHHHHHHHHhcCCCce
Confidence 999999873 22 333332211 12456688888888888863 12222222 234444343
Q ss_pred e-ecccceeEEEEecC-------ChHHHHHHHH-HCCceeeecCC---CCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 013008 380 D-VRGLGLIIGIEFDV-------SATPVVDACR-DSGLLVLTAGK---GNVVRLVPPLIISEQELDQAVEILCKTLPV 445 (451)
Q Consensus 380 ~-v~g~G~~~~~~~~~-------~~~~~~~~l~-~~Gv~~~~~~~---~~~iri~~~~~~t~e~i~~~l~~l~~~l~~ 445 (451)
. .+..|+++|+.++. +..++++.|+ ++||.+.|+.. .+++|++.. ..++.+++++++|.+++++
T Consensus 326 ~~~p~~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~iRis~~--~~~~~l~~~l~~l~~~~~~ 401 (403)
T TIGR01265 326 CPKPEGAMYLMVKLELELFPEIKDDVDFCEKLVREESVICLPGSAFGLPNWVRITIT--VPESMLEEACSRIKEFCER 401 (403)
T ss_pred ecCCCceeEEEEeccccccCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEec--CCHHHHHHHHHHHHHHHHh
Confidence 2 24458888888742 4667888865 67999998742 467888654 5789999999999998865
No 187
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.90 E-value=5.5e-22 Score=200.22 Aligned_cols=325 Identities=15% Similarity=0.108 Sum_probs=194.7
Q ss_pred CCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcc-----ccc--CCCCCHHHHHHHHHHhhccC----CCeEEecCCHH
Q 013008 97 GREYLDLSSGIAVNALGHGDADWIKAVVDQANVLT-----HVS--NMYYSIPQIELAKRLVACSF----ADRVFFSNTGT 165 (451)
Q Consensus 97 G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~-----~~~--~~~~~~~~~~l~~~l~~~~~----~e~v~~~~sG~ 165 (451)
|..++|+..|.. .++ .+|.+.+++.+.+.+.. ..+ ..+....+..+++++.+..+ .++|++|+|+.
T Consensus 33 ~~~~i~l~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~ 109 (409)
T PRK07590 33 EAKIIRLGIGDV--TQP-LPPAVIEAMHKAVDEMGTAETFRGYGPEQGYDFLREKIAENDYQARGCDISADEIFISDGAK 109 (409)
T ss_pred CCceEEecCcCC--CCC-CCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHHhcCCcCChhhEEECCCHH
Confidence 566889888865 343 56889999998886531 111 11122234555555543332 78999999999
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCC
Q 013008 166 EANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPG 245 (451)
Q Consensus 166 eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~ 245 (451)
+|+...+.+ . .++|+|++.+|+|+++...+...+.... ..... ....+..++.+.-+.++.-+...
T Consensus 110 ~al~~l~~~-~-----------~~gd~V~v~~P~Y~~~~~~~~~~g~~~~-~~~~~-~~~~~~~v~~~~~~~~~~d~~~~ 175 (409)
T PRK07590 110 CDTGNILDI-F-----------GPDNTIAVTDPVYPVYVDTNVMAGRTGE-ANEDG-RYSGIVYLPCTAENNFVPELPEE 175 (409)
T ss_pred HHHHHHHHh-c-----------CCCCEEEEeCCCCcchHHHHHHcCCccc-ccccc-cccceeEeecccccCCcccCccc
Confidence 998875432 1 1689999999999988654443332100 00000 00012222221000111111123
Q ss_pred CeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCccccc-cccccc-C---CCcceeeeccccc-C
Q 013008 246 KTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYL-WAHEHY-G---IFPDIMTLAKPLA-G 319 (451)
Q Consensus 246 ~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~-~~~~~~-~---~~pdi~t~sK~lg-~ 319 (451)
++++|++...++++| .+++.+.+++|.++|++||++||+||+|..|-..+.. ...... + ....+.+|||.++ .
T Consensus 176 ~~k~i~l~nP~NPTG-~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~p 254 (409)
T PRK07590 176 KVDIIYLCFPNNPTG-TVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPSLPHSIYEIEGARECAIEFRSFSKTAGFT 254 (409)
T ss_pred CceEEEEeCCCCCcC-CcCCHHHHHHHHHHHHHcCeEEEEEccchhhccCCCCCcchhhCCCcccceEEEecCccccCCc
Confidence 455555433344445 4679999999999999999999999999887433321 111111 1 1233447999998 7
Q ss_pred CcccccccccHHHHhhccC-----------CCccCCC-CCcHHHHHHHHHHHHHhcChHHHHH--------------HHh
Q 013008 320 GLPIGAALVTEKVASAINY-----------GDHGSTF-AGSPLVCNAAIAVLDKISNPAFLAS--------------KLA 373 (451)
Q Consensus 320 G~~iG~v~~~~~i~~~~~~-----------~~~~~t~-~~~~~~~aaa~aal~~~~~~~~~~~--------------~~~ 373 (451)
|+|+||+++++++++.+.. .....++ +.+.+++.++.++++.- ...+.++ .++
T Consensus 255 GlRiG~~i~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~-~~~~~~~~~~~~~~~r~~l~~~L~ 333 (409)
T PRK07590 255 GTRCAYTVVPKELKGKTSDGEGVSLNSLWNRRQSTKFNGVSYIVQRAAEAVYSPE-GKAQIKELIDYYMENAKIIREGLE 333 (409)
T ss_pred CceeEEEEcCHHHhhhccccchhhhHHHHHHHHhhcccCcCHHHHHHHHHHhcCC-cHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998873210 0112233 46778888887777521 1222221 222
Q ss_pred CCCCcceecc-cceeEEEEec--CChHHHHHHHHH-CCceeeecC---C--CCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 013008 374 RNPHVKDVRG-LGLIIGIEFD--VSATPVVDACRD-SGLLVLTAG---K--GNVVRLVPPLIISEQELDQAVEILCKTL 443 (451)
Q Consensus 374 ~~~~~~~v~g-~G~~~~~~~~--~~~~~~~~~l~~-~Gv~~~~~~---~--~~~iri~~~~~~t~e~i~~~l~~l~~~l 443 (451)
.++ +....+ .|+++|+.+. ....++++.|++ .||.+.|+. . .+.+|++ +..+++++++++++|.+++
T Consensus 334 ~~~-~~~~~~~g~~f~wi~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~--~~~~~~~l~~~l~rl~~~~ 409 (409)
T PRK07590 334 SAG-FEVYGGVNAPYIWVKTPDGMSSWDFFDKLLQEANVVGTPGSGFGPSGEGYFRLS--AFGSRENVLEAMERIKKAL 409 (409)
T ss_pred hcC-CceecCCcceEEEEECCCCCCHHHHHHHHHHHCCEEEeChhHhCCCCCCEEEEE--ccCCHHHHHHHHHHHHhhC
Confidence 332 332334 4678888884 246778888874 699998863 1 2578886 4568999999999998753
No 188
>PRK09265 aminotransferase AlaT; Validated
Probab=99.90 E-value=1.5e-21 Score=196.79 Aligned_cols=329 Identities=15% Similarity=0.166 Sum_probs=203.0
Q ss_pred CCCEEEeeccCcccccCCC-CCHHHHHHHHHHHhhcccccC-CCCCHHHHHHHHHHhhcc--C--CCeEEecCCHHHHHH
Q 013008 96 EGREYLDLSSGIAVNALGH-GDADWIKAVVDQANVLTHVSN-MYYSIPQIELAKRLVACS--F--ADRVFFSNTGTEANE 169 (451)
Q Consensus 96 ~G~~~iD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~--~--~e~v~~~~sG~eA~~ 169 (451)
.|+.++||..|... .+++ .+|++.+++.+.+.....++. .+..+.++.+++++.... + .++|++++|+++++.
T Consensus 31 ~~~~~i~l~~g~p~-~~~~~~~~~i~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~~l~ 109 (404)
T PRK09265 31 EGHKILKLNIGNPA-PFGFEAPDEILRDVIRNLPTAQGYSDSKGLFSARKAIMQYYQQKGIPDVDVDDIYIGNGVSELIV 109 (404)
T ss_pred cCCCeEEecCCCCC-cCCCCCCHHHHHHHHHHhhcCCCCCCCCCcHHHHHHHHHHHhccCCCCCCcccEEEeCChHHHHH
Confidence 56788999887553 3565 567888888876654211111 111222444444443221 2 678999999999999
Q ss_pred HHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEE
Q 013008 170 AAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAA 249 (451)
Q Consensus 170 ~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aa 249 (451)
.+++++. .++|.|++.+|+|..+.......+.... . .+......+ .-|++++++.+.++...+
T Consensus 110 ~~~~~~~-----------~~gd~Vlv~~p~y~~~~~~~~~~g~~~v-~---~~~~~~~~~--~~d~~~l~~~~~~~~~~v 172 (404)
T PRK09265 110 MAMQALL-----------NNGDEVLVPAPDYPLWTAAVSLSGGKPV-H---YLCDEEAGW--FPDLDDIRSKITPRTKAI 172 (404)
T ss_pred HHHHHhC-----------CCCCEEEEeCCCCcChHHHHHHcCCEEE-E---EecccccCC--CCCHHHHHHhccccceEE
Confidence 9988654 1688999999999876544433221111 1 011000000 027899999886543345
Q ss_pred EEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCccccc-cccccc--C-CCcceeeeccccc-CCcccc
Q 013008 250 VFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYL-WAHEHY--G-IFPDIMTLAKPLA-GGLPIG 324 (451)
Q Consensus 250 vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~-~~~~~~--~-~~pdi~t~sK~lg-~G~~iG 324 (451)
+++.|. +++|. ..+.+.+++|.++|++||+++|+||+|.+|-+.+.. ...... + ...-+-+|||.++ +|+|+|
T Consensus 173 ~l~~P~-NPtG~-~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG 250 (404)
T PRK09265 173 VIINPN-NPTGA-VYSKELLEEIVEIARQHNLIIFADEIYDKILYDGAVHISIASLAPDLLCVTFNGLSKAYRVAGFRVG 250 (404)
T ss_pred EEECCC-CCCCc-CCCHHHHHHHHHHHHHCCCEEEEehhhhhccCCCCCcCCHHHcCCCceEEEEecchhhccCcccceE
Confidence 556664 44554 568899999999999999999999999887443321 111111 1 1122346899996 699999
Q ss_pred cccc--cHH----HHhhccCCCccCCCCCcHHHHHHHHHHHHHhcC-hHH-------HHH------HHhCCCCcceec-c
Q 013008 325 AALV--TEK----VASAINYGDHGSTFAGSPLVCNAAIAVLDKISN-PAF-------LAS------KLARNPHVKDVR-G 383 (451)
Q Consensus 325 ~v~~--~~~----i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~-------~~~------~~~~~~~~~~v~-g 383 (451)
|+++ +++ +++.+... ...+++.|.+++.++.++|+..+. ..+ .++ .++.++.+.... .
T Consensus 251 ~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~p~ 329 (404)
T PRK09265 251 WMVLSGPKKHAKGYIEGLDML-ASMRLCANVPAQHAIQTALGGYQSINELILPGGRLYEQRDRAWELLNAIPGVSCVKPK 329 (404)
T ss_pred EEEEeCchHHHHHHHHHHHHH-hccccCCCcHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCC
Confidence 9985 443 33333211 123456778888888888742111 011 111 334444443333 3
Q ss_pred cceeEEEEecC------Ch-HHHHHHHHHCCceeeecCC-----CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHh
Q 013008 384 LGLIIGIEFDV------SA-TPVVDACRDSGLLVLTAGK-----GNVVRLVPPLIISEQELDQAVEILCKTLPVLD 447 (451)
Q Consensus 384 ~G~~~~~~~~~------~~-~~~~~~l~~~Gv~~~~~~~-----~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~~ 447 (451)
.|+++|+.++. .. ..+.+.|.++||.+.|+.. .+++|++. ..++|++++++++|.++++..+
T Consensus 330 ~g~~l~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~pg~~F~~~~~~~~Ri~~--~~~~e~l~~~l~rl~~~l~~~~ 403 (404)
T PRK09265 330 GALYAFPKLDPKVYPIHDDEQFVLDLLLQEKVLLVQGTGFNWPEPDHFRIVT--LPRVDDLEEAIGRIGRFLSGYR 403 (404)
T ss_pred cceEEEEEecccccCCCCHHHHHHHHHHhCCEEEECchhhCCCCCCeEEEEe--CCCHHHHHHHHHHHHHHHHHhc
Confidence 47788887742 22 3466777889999988631 36788865 4689999999999999987654
No 189
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=99.90 E-value=8.7e-22 Score=199.38 Aligned_cols=333 Identities=14% Similarity=0.095 Sum_probs=201.2
Q ss_pred EEEeeccCcccccCCCCC--HHHHHHHHHHHhhcc-------cccCCCCCHHHHHHHHHHhhccC----CCeEEecCCHH
Q 013008 99 EYLDLSSGIAVNALGHGD--ADWIKAVVDQANVLT-------HVSNMYYSIPQIELAKRLVACSF----ADRVFFSNTGT 165 (451)
Q Consensus 99 ~~iD~~~~~~~~~lG~~~--p~v~~a~~~~~~~~~-------~~~~~~~~~~~~~l~~~l~~~~~----~e~v~~~~sG~ 165 (451)
..|||..+... + ... +.+.+++.+.+++.. +....+....+..+++++.+.++ .++|++|+|++
T Consensus 31 ~~i~l~~g~p~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~v~~~~I~it~Ga~ 107 (416)
T PRK09440 31 GAIMLGGGNPA--H-IPEMEDYFRDLLADLLASGKLTEALGNYDGPQGKDELIEALAALLNERYGWNISPQNIALTNGSQ 107 (416)
T ss_pred CceeccCCCCC--c-cCCHHHHHHHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccChH
Confidence 45888876542 1 122 356677766654321 11111222346666766665433 67999999999
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCCCCceEEE-EcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeC-CCHHHHHHhcC
Q 013008 166 EANEAAIKFARKFQRHSNPDSKEPATEFVS-FTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEY-GNIEATRKLIQ 243 (451)
Q Consensus 166 eA~~~al~~a~~~~~~~~~~~~~~~~~ii~-~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~~le~~l~ 243 (451)
+|+..++++...... ..+++.|++ .+|+|+++...+..............+...+. ..+ -|+++|+ +.
T Consensus 108 ~al~~~~~~l~~~~~------~~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~d~~~l~--~~ 177 (416)
T PRK09440 108 SAFFYLFNLFAGRRA------DGSLKKILFPLAPEYIGYADAGLEEDLFVSYRPNIELLPEGQ--FKYHVDFEHLH--ID 177 (416)
T ss_pred HHHHHHHHHHhcccc------CCCCCeEEEecCCCchhhHHHhhccCceeecccccccccccc--cccCCCHHHcc--cC
Confidence 999999986652100 013678999 69999988653322110000000011111110 001 2677776 33
Q ss_pred CCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccc-cc--cccCCCcceeeecccccCC
Q 013008 244 PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLW-AH--EHYGIFPDIMTLAKPLAGG 320 (451)
Q Consensus 244 ~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~-~~--~~~~~~pdi~t~sK~lg~G 320 (451)
. +++++++...++++|. +++.+.+++|.++|++||+++|+||+|..+ .....+ .. ...+...-+.+|||....|
T Consensus 178 ~-~~~~i~l~~P~NPTG~-~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~-~~~~~~~~~~~~~~~~vI~~~SfSK~~~pG 254 (416)
T PRK09440 178 E-DTGAICVSRPTNPTGN-VLTDEELEKLDALARQHNIPLLIDNAYGPP-FPGIIFSEATPLWNPNIILCMSLSKLGLPG 254 (416)
T ss_pred C-CceEEEEecCCCCCCc-cCCHHHHHHHHHHHHHcCCcEEEeCCcccc-CCCcchhhcCccccCCeEEEecccccCCCc
Confidence 3 4444444433455554 679999999999999999999999999643 111110 00 0011223345899974469
Q ss_pred cccccccccHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcCh----H-HH----HH-------HHhCCCC--cceec
Q 013008 321 LPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNP----A-FL----AS-------KLARNPH--VKDVR 382 (451)
Q Consensus 321 ~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~----~-~~----~~-------~~~~~~~--~~~v~ 382 (451)
+|+||+++++++++.+.........+.+.+.+.++.++|+.-.-. . .. ++ +.+.++. +....
T Consensus 255 lRiG~~i~~~~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~l~~~~~~~~~ 334 (416)
T PRK09440 255 VRCGIVIADEEIIEALSNMNGIISLAPGRLGPAIAAEMIESGDLLRLSETVIRPFYRQKVQLAIALLRRYLPDEPCLIHK 334 (416)
T ss_pred ceEEEEeCCHHHHHHHHHHHHHhccCCCcHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCeEEec
Confidence 999999999999988864433344567888998888887521100 0 10 11 2222222 22233
Q ss_pred c-cceeEEEEec---CChHHHHHHHHHCCceeeecCC---C---------CEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 013008 383 G-LGLIIGIEFD---VSATPVVDACRDSGLLVLTAGK---G---------NVVRLVPPLIISEQELDQAVEILCKTLPVL 446 (451)
Q Consensus 383 g-~G~~~~~~~~---~~~~~~~~~l~~~Gv~~~~~~~---~---------~~iri~~~~~~t~e~i~~~l~~l~~~l~~~ 446 (451)
+ .|+++|+++. ....++.+.|.++||.+.|+.. + +++|++++ .+++++++++++|.+++++.
T Consensus 335 p~gg~fiw~~~~~~~~~~~~~~~~l~~~gV~v~pg~~F~~~~~~~~~~~~~~iRis~~--~~~~~l~~~i~~l~~~~~~~ 412 (416)
T PRK09440 335 PEGAIFLWLWFKDLPITTEELYQRLKARGVLVVPGHYFFPGLDEDWPHAHQCIRMNYV--QDDEEIEKGIAILAEEVEKA 412 (416)
T ss_pred CCCceEEEEECCCCCCCHHHHHHHHHHCCEEEechHhhCCCCccccCCcCceEEEEec--CCHHHHHHHHHHHHHHHHHH
Confidence 4 4788888884 2467888999999999998521 1 36888654 47999999999999999887
Q ss_pred hhc
Q 013008 447 DSN 449 (451)
Q Consensus 447 ~~~ 449 (451)
+++
T Consensus 413 ~~~ 415 (416)
T PRK09440 413 YAE 415 (416)
T ss_pred hhc
Confidence 654
No 190
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.90 E-value=1.2e-21 Score=197.29 Aligned_cols=307 Identities=18% Similarity=0.114 Sum_probs=191.9
Q ss_pred cCcccccCCCCCHHHHHHHHHHHhhcccccCC-------CCCHHHHHHHHHHhhccCCC--eEEecCCHHHHHHHHHHHH
Q 013008 105 SGIAVNALGHGDADWIKAVVDQANVLTHVSNM-------YYSIPQIELAKRLVACSFAD--RVFFSNTGTEANEAAIKFA 175 (451)
Q Consensus 105 ~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~-------~~~~~~~~l~~~l~~~~~~e--~v~~~~sG~eA~~~al~~a 175 (451)
++.+....||++|.+++++..++ .....+.. +..+.+.+++++++++++.+ .+.++++|+++.+.++..+
T Consensus 23 ~~l~~g~~~~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~~~~~v~~~~~g~~~~~~~~~~~ 101 (398)
T cd00613 23 SFLGSGTYKHNPPAVIKRNILEN-EFYTAYTPYQPEISQGRLQALFELQTMLCELTGMDVANASLQDEATAAAEAAGLAA 101 (398)
T ss_pred ccccccccCCcCcHHHHHHhccc-cCcccCCCCChhhhhhHHHHHHHHHHHHHHHHCCCccceeccCchHHHHHHHHHHH
Confidence 34445567999999988877665 22111111 12234678899999988744 7888887777777777766
Q ss_pred HHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeC-----CCHHHHHHhcCCCCeEEE
Q 013008 176 RKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEY-----GNIEATRKLIQPGKTAAV 250 (451)
Q Consensus 176 ~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~le~~l~~~~~aav 250 (451)
+...+ +++.|++.++ +|+.+...+...+... ...+..++. .|++++++.+.+ ++++|
T Consensus 102 ~~~~~--------~gd~Vl~~~~-~h~~~~~~~~~~~~~~--------g~~~~~v~~~~~~~~d~~~l~~~i~~-~t~~v 163 (398)
T cd00613 102 IRAYH--------KRNKVLVPDS-AHPTNPAVARTRGEPL--------GIEVVEVPSDEGGTVDLEALKEEVSE-EVAAL 163 (398)
T ss_pred Hhccc--------CCCEEEEcCc-cCcchHHHHHHhcccC--------CcEEEEeccCCCCCcCHHHHHHhcCC-CeEEE
Confidence 53211 2666776555 7777766665543211 011222332 278999998864 58888
Q ss_pred EEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccccccCCCcceee--ecccc---c-CCcccc
Q 013008 251 FVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMT--LAKPL---A-GGLPIG 324 (451)
Q Consensus 251 i~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~t--~sK~l---g-~G~~iG 324 (451)
++++++ ++|.+ .+++++|+++|++||+++|+|++|......+. ...+ .+|+++ ++|.+ + ||+++|
T Consensus 164 iv~~~~-~~G~~---~~~l~~i~~la~~~g~~livD~~~~~~~~~~~---~~~~--~~d~~~~s~~K~~~p~g~Ggp~~g 234 (398)
T cd00613 164 MVQYPN-TLGVF---EDLIKEIADIAHSAGALVYVDGDNLNLTGLKP---PGEY--GADIVVGNLQKTGVPHGGGGPGAG 234 (398)
T ss_pred EEECCC-CCcee---cchHHHHHHHHHhcCCEEEEEeccccccCCCC---hHHc--CCCEEEeeccccCCCCCCCCCcee
Confidence 888865 55665 35689999999999999999999853211111 1122 367764 56876 2 357889
Q ss_pred cccccHHHHhhccCC-----------------------------CccCCCCCcHHHHHHHHHHHHHhcChHHH---HH--
Q 013008 325 AALVTEKVASAINYG-----------------------------DHGSTFAGSPLVCNAAIAVLDKISNPAFL---AS-- 370 (451)
Q Consensus 325 ~v~~~~~i~~~~~~~-----------------------------~~~~t~~~~~~~~aaa~aal~~~~~~~~~---~~-- 370 (451)
+++.++++++.+.+. ....+++++++.++++.++++.+..+++. ++
T Consensus 235 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~a~~~l~~~~~~g~~~~~~~~~ 314 (398)
T cd00613 235 FFAVKKELVRFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICTGQALLALMAAMYIVYLGPEGLKEIAERAH 314 (398)
T ss_pred EEEEhhhhHhhCCCCeeccccccCCCcceEEecccchhhcccccccccceecHHHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence 999988888765221 11235666777777777777765443322 22
Q ss_pred -----HH---hCCCCcceec-ccceeEEEEecC----ChHHHHHHHHHCCceeeecC--CCCEEEEeCCCCCCHHHHHHH
Q 013008 371 -----KL---ARNPHVKDVR-GLGLIIGIEFDV----SATPVVDACRDSGLLVLTAG--KGNVVRLVPPLIISEQELDQA 435 (451)
Q Consensus 371 -----~~---~~~~~~~~v~-g~G~~~~~~~~~----~~~~~~~~l~~~Gv~~~~~~--~~~~iri~~~~~~t~e~i~~~ 435 (451)
+. +.++...... .....+++.+.. ...++++.|+++|+++.... .++.+|++|++.+|+||||++
T Consensus 315 ~~~~~l~~~L~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~L~~~gi~~~~~~~~~~~~lRis~~~~~t~edid~~ 394 (398)
T cd00613 315 LNANYLAKRLKEVGGVLPFNGPFFHEFVLRLPPLYGIRAEDLAKALIDGGFHAPTMYLPVDGTLMIEPTETETKEELDAL 394 (398)
T ss_pred HHHHHHHHHHHhcCCcccCCCCeeEEEEEEcCCcchHHHHHHHHhhhhcCccccccccCCCCeEEEEcCCCCCHHHHHHH
Confidence 22 2233221111 111223444432 35678999999999876531 237899999999999999999
Q ss_pred HHHH
Q 013008 436 VEIL 439 (451)
Q Consensus 436 l~~l 439 (451)
++.|
T Consensus 395 ~~~L 398 (398)
T cd00613 395 LEAL 398 (398)
T ss_pred HHhC
Confidence 8864
No 191
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.90 E-value=1e-21 Score=192.66 Aligned_cols=256 Identities=21% Similarity=0.223 Sum_probs=177.1
Q ss_pred HHHHHHHHhhccC--CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCC
Q 013008 142 QIELAKRLVACSF--ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSP 219 (451)
Q Consensus 142 ~~~l~~~l~~~~~--~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~ 219 (451)
..++.+.++++++ .+++++++|+++++..+.+++. ++ +|++.+|+|+.+.......
T Consensus 49 ~~~lr~~la~~~~~~~~~i~~t~G~~~~i~~~~~~l~------------~g-~vl~~~p~y~~~~~~~~~~--------- 106 (330)
T TIGR01140 49 YDELRAAAAAYYGLPAASVLPVNGAQEAIYLLPRLLA------------PG-RVLVLAPTYSEYARAWRAA--------- 106 (330)
T ss_pred HHHHHHHHHHHhCCChhhEEECCCHHHHHHHHHHHhC------------CC-eEEEeCCCcHHHHHHHHHc---------
Confidence 4788888888887 5799999999999888655421 35 6999999998775432111
Q ss_pred CcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccc
Q 013008 220 FEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLW 299 (451)
Q Consensus 220 ~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~ 299 (451)
++.+++++|++.+++.+++ ..+++++.|. +++|. .++.+.+++|+++|++||+++|+||+|.++......
T Consensus 107 ------g~~~~~~~d~~~l~~~~~~-~~~v~i~~p~-NPtG~-~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~- 176 (330)
T TIGR01140 107 ------GHEVVELPDLDRLPAALEE-LDVLVLCNPN-NPTGR-LIPPETLLALAARLRARGGWLVVDEAFIDFTPDASL- 176 (330)
T ss_pred ------CCEEEEeCCHHHHHhhccc-CCEEEEeCCC-CCCCC-CCCHHHHHHHHHHhHhcCCEEEEECcccccCCccch-
Confidence 1222333389999998853 3355566664 44454 679999999999999999999999999877432111
Q ss_pred cccccCCCccee---eeccccc-CCcccccccccHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH-----
Q 013008 300 AHEHYGIFPDIM---TLAKPLA-GGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS----- 370 (451)
Q Consensus 300 ~~~~~~~~pdi~---t~sK~lg-~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~----- 370 (451)
....+..++++ +|||.+| .|+|+||+++++++++.+... ...++.++++++++.+.++ +.++.++
T Consensus 177 -~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~--~~~~~~s~~~q~~~~~~l~---~~~~~~~~~~~~ 250 (330)
T TIGR01140 177 -APQAARFPGLVVLRSLTKFFGLAGLRLGFVVAHPALLARLREA--LGPWTVNGPARAAGRAALA---DTAWQAATRARL 250 (330)
T ss_pred -hhHhccCCCEEEEEecchhhcCchhhhhheeCCHHHHHHHHhc--CCCCCchHHHHHHHHHHHh---chHHHHHHHHHH
Confidence 11111122333 8999999 689999999999999888643 2356678888888877776 3333222
Q ss_pred ---------HHhCCCCcceecccceeEEEEecCChHHHHHHHHHCCceeeecCC-----CCEEEEeCCCCCCHHHHHHHH
Q 013008 371 ---------KLARNPHVKDVRGLGLIIGIEFDVSATPVVDACRDSGLLVLTAGK-----GNVVRLVPPLIISEQELDQAV 436 (451)
Q Consensus 371 ---------~~~~~~~~~~v~g~G~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~-----~~~iri~~~~~~t~e~i~~~l 436 (451)
.++.++.+....+.|+++|+.+. ...+++++|+++||.+.|+.. .+++|++++ ...++ ++++
T Consensus 251 ~~~~~~l~~~L~~~~~~~~~~~~~~f~~~~~~-~~~~l~~~l~~~gi~v~pg~~f~~~~~~~iRi~~~--~~~~~-~~~~ 326 (330)
T TIGR01140 251 AAERARLAALLARLGGLEVVGGTALFLLVRTP-DAAALHEALARRGILIRDFDNFPGLDPRYLRFALP--TDEEN-DRLE 326 (330)
T ss_pred HHHHHHHHHHHHhCCCceECCCCCeEEEEEcC-CHHHHHHHHHHCCEEEEECCCCCCCCCCEEEEEec--CHHHH-HHHH
Confidence 33445544444567888888874 467899999999999998632 257888654 34444 6666
Q ss_pred HHH
Q 013008 437 EIL 439 (451)
Q Consensus 437 ~~l 439 (451)
++|
T Consensus 327 ~~l 329 (330)
T TIGR01140 327 EAL 329 (330)
T ss_pred Hhh
Confidence 655
No 192
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.90 E-value=3.6e-21 Score=193.33 Aligned_cols=324 Identities=16% Similarity=0.145 Sum_probs=204.9
Q ss_pred CEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccc-----cCCCCCHHHHHHHHHHhhcc----CCCeEEecCCHHHHH
Q 013008 98 REYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHV-----SNMYYSIPQIELAKRLVACS----FADRVFFSNTGTEAN 168 (451)
Q Consensus 98 ~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~-----~~~~~~~~~~~l~~~l~~~~----~~e~v~~~~sG~eA~ 168 (451)
...+||..+.+. + ..++.+.+++.+.++..... ...+....+..+++.+...+ ..+++++++|+++|+
T Consensus 33 ~~~~~l~~g~p~--~-~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~G~~~al 109 (394)
T PRK06836 33 DNVFDFSLGNPS--V-PPPAAVKEALRELAEEEDPGLHGYMPNAGYPEVREAIAESLNRRFGTPLTADHIVMTCGAAGAL 109 (394)
T ss_pred CCeEEecCcCCC--C-CCCHHHHHHHHHHHhcCCcCcccCCCCCCCHHHHHHHHHHHHHHhCCCCCcCcEEEeCChHHHH
Confidence 457888877542 2 25678888888776542111 11112223455666555433 277899999999999
Q ss_pred HHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeE
Q 013008 169 EAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTA 248 (451)
Q Consensus 169 ~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a 248 (451)
..+++.+. .+++.|++.+|+|.++....... +..... .+..++.. --|++++++++.+ +++
T Consensus 110 ~~~~~~l~-----------~~gd~Vli~~p~~~~~~~~~~~~-g~~v~~---v~~~~~~~---~~d~~~l~~~~~~-~~~ 170 (394)
T PRK06836 110 NVALKAIL-----------NPGDEVIVFAPYFVEYRFYVDNH-GGKLVV---VPTDTDTF---QPDLDALEAAITP-KTK 170 (394)
T ss_pred HHHHHHhc-----------CCCCEEEEcCCCCccHHHHHHHc-CCEEEE---EecCCccC---cCCHHHHHhhcCc-Cce
Confidence 99988654 16889999999998875443222 211111 11111100 0278999999965 456
Q ss_pred EEEEccccCCCCccccCHHHHHHHHHHHHH------hCCEEEEeccccCCCccccccc--ccccCCCcceeeeccccc-C
Q 013008 249 AVFVEPIQGEGGIYSATKEFLQFLRDACDD------AGALLVFDEVQCGLGRTGYLWA--HEHYGIFPDIMTLAKPLA-G 319 (451)
Q Consensus 249 avi~ep~~~~~G~~~~~~~~l~~l~~l~~~------~g~llI~DEv~tg~gr~G~~~~--~~~~~~~pdi~t~sK~lg-~ 319 (451)
+|++...++++|. ..+.+.+++|.++|++ ||+++|+||+|.+|-..+.... ...++...-+.+|||.++ .
T Consensus 171 ~v~~~~p~NPtG~-~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~p 249 (394)
T PRK06836 171 AVIINSPNNPTGV-VYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGAEVPYIFKYYDNSIVVYSFSKSLSLP 249 (394)
T ss_pred EEEEeCCCCCCCc-CCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCCCCCCChHHccCcEEEEecchhhccCc
Confidence 6666555555554 6789999999999999 8999999999988744332111 111222222347899998 7
Q ss_pred CcccccccccHHHHhh------ccCCC-ccCCCCCcHHHHHHHHHHHHHhc-ChHHHHH------HHhCCCCcceecc-c
Q 013008 320 GLPIGAALVTEKVASA------INYGD-HGSTFAGSPLVCNAAIAVLDKIS-NPAFLAS------KLARNPHVKDVRG-L 384 (451)
Q Consensus 320 G~~iG~v~~~~~i~~~------~~~~~-~~~t~~~~~~~~aaa~aal~~~~-~~~~~~~------~~~~~~~~~~v~g-~ 384 (451)
|+|+||+++++++.+. +.... .....+.+++.+.++...++... ...+.++ .++++. +....+ .
T Consensus 250 GlRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~r~~l~~~L~~~g-~~~~~~~g 328 (394)
T PRK06836 250 GERIGYIAVNPEMEDADDLVAALVFANRILGFVNAPALMQRVVAKCLDATVDVSIYKRNRDLLYDGLTELG-FECVKPQG 328 (394)
T ss_pred ceeeEEEecCHHHhhhHHHHHHHHHHhhccccccCCHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHhCC-CEeecCCc
Confidence 9999999998876432 11111 11224567777777776664211 1112122 333433 222333 3
Q ss_pred ceeEEEEec-CChHHHHHHHHHCCceeeecCC---CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHh
Q 013008 385 GLIIGIEFD-VSATPVVDACRDSGLLVLTAGK---GNVVRLVPPLIISEQELDQAVEILCKTLPVLD 447 (451)
Q Consensus 385 G~~~~~~~~-~~~~~~~~~l~~~Gv~~~~~~~---~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~~ 447 (451)
|+++|+.+. .+..++++.|.++||.+.|+.. ++.+||+++ .+++++++++++|.+++++.+
T Consensus 329 g~~~~~~~~~~~~~~~~~~l~~~gv~v~~g~~f~~~~~iRi~~~--~~~~~~~~~i~~l~~~l~~~~ 393 (394)
T PRK06836 329 AFYLFPKSPEEDDVAFCEKAKKHNLLLVPGSGFGCPGYFRLSYC--VDTETIERSLPAFEKLAKEYK 393 (394)
T ss_pred eEEEEEeCCCCCHHHHHHHHHhCCEEEECchhcCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHhc
Confidence 677777663 3567888889999999998742 367899765 689999999999999997653
No 193
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=99.89 E-value=1.2e-21 Score=192.23 Aligned_cols=305 Identities=18% Similarity=0.158 Sum_probs=197.2
Q ss_pred eecccEEEecCCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHhhccC-----CCeEEe
Q 013008 86 SGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSF-----ADRVFF 160 (451)
Q Consensus 86 ~~~G~~l~d~~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-----~e~v~~ 160 (451)
++.|.+-+...|+..+|+..|.. .+| .+|.+++++.+.+..... ..|+.....+|.+.++++++ .++|++
T Consensus 7 ~~~~~~~~~~~~~~~i~l~~~~~--~~~-~p~~~~~~~~~~~~~~~~--~~Y~~~~~~~Lr~aia~~~~~~~~~~~~i~i 81 (335)
T PRK14808 7 IAKRAYPYETEKRDRTYLALNEN--PFP-FPEDLVDEVFRRLNSDTL--RIYYDSPDEELIEKILSYLDTDFLSKNNVSV 81 (335)
T ss_pred hhccCcCCCCCCCceeEecCCCC--CCC-CCHHHHHHHHHHhhhhhh--hcCCCCChHHHHHHHHHHhCCCCCCcceEEE
Confidence 45666666678889999988765 565 678899999887653211 11222235566666766654 779999
Q ss_pred cCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHH
Q 013008 161 SNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRK 240 (451)
Q Consensus 161 ~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~ 240 (451)
|+|+++++..++++. +.|++.+|+|.++...+...+.... . .+...+... +..
T Consensus 82 t~Ga~~~i~~~~~~~---------------d~v~v~~P~y~~~~~~~~~~g~~~~-~---v~~~~~~~~----~~~---- 134 (335)
T PRK14808 82 GNGADEIIYVMMLMF---------------DRSVFFPPTYSCYRIFAKAVGAKFL-E---VPLTKDLRI----PEV---- 134 (335)
T ss_pred cCCHHHHHHHHHHHh---------------CcEEECCCCHHHHHHHHHHcCCeEE-E---ecCCCcCCC----Chh----
Confidence 999999999998743 2499999999888755544432211 1 111111100 111
Q ss_pred hcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCccccccc-ccccCCCcceeeeccccc-
Q 013008 241 LIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWA-HEHYGIFPDIMTLAKPLA- 318 (451)
Q Consensus 241 ~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~-~~~~~~~pdi~t~sK~lg- 318 (451)
.+. .....++++|.|++ |. ..+.+.+++|. +++++||+||+|..|. ...... ...+....-+.+|||.++
T Consensus 135 ~~~-~~~~i~i~nP~NPT-G~-~~s~~~l~~l~----~~~~~ii~DE~Y~~f~-~~~~~~~~~~~~~vi~~~S~SK~~~l 206 (335)
T PRK14808 135 NVG-EGDVVFIPNPNNPT-GH-VFEREEIERIL----KTGAFVALDEAYYEFH-GESYVDLLKKYENLAVIRTFSKAFSL 206 (335)
T ss_pred Hcc-CCCEEEEeCCCCCC-CC-CcCHHHHHHHH----hcCCEEEEECchhhhc-CCchHHHHHhCCCEEEEEechhhccC
Confidence 122 23344455555544 44 45666666654 5899999999998873 111111 122222333458999999
Q ss_pred CCcccccccccHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH--------------HHhCCCCcceeccc
Q 013008 319 GGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS--------------KLARNPHVKDVRGL 384 (451)
Q Consensus 319 ~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~--------------~~~~~~~~~~v~g~ 384 (451)
.|+|+||+++++++++.+.... .+++.+++++.++.++++.. ++.++ .++..+ +....+.
T Consensus 207 ~GlRvG~~v~~~~~~~~l~~~~--~~~~~~~~~q~a~~~~l~~~---~~~~~~~~~~~~~r~~l~~~L~~~g-~~~~~~~ 280 (335)
T PRK14808 207 AAQRIGYVVSSEKFIDAYNRVR--LPFNVSYVSQMFAKVALDHR---EIFEERTKFIVEERERMKSALREMG-YRITDSR 280 (335)
T ss_pred cccceEEEEeCHHHHHHHHHhc--CCCCCCHHHHHHHHHHHhCH---HHHHHHHHHHHHHHHHHHHHHHHCC-CEECCCC
Confidence 7999999999999999886433 34667888888888888632 12111 223332 3335678
Q ss_pred ceeEEEEec-CChHHHHHHHHHCCceeeecCCCCEEEEeCCCCCCHHHHHHHHHHHHH
Q 013008 385 GLIIGIEFD-VSATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCK 441 (451)
Q Consensus 385 G~~~~~~~~-~~~~~~~~~l~~~Gv~~~~~~~~~~iri~~~~~~t~e~i~~~l~~l~~ 441 (451)
|.++|+.+. .+..++.+.|.++||++.... +.+|+++. +.++.+++++.|++
T Consensus 281 g~f~~~~l~~~~~~~~~~~l~~~Gi~V~~~~--~~~Risi~---~~~~~~~~~~~l~~ 333 (335)
T PRK14808 281 GNFVFIFMEKEEKERLLEHLRAKNIAVRSFR--EGVRITIG---KREENDMILKELEV 333 (335)
T ss_pred CeEEEEeCCCccHHHHHHHHHHCCeEEEECC--CCeEEecC---CHHHHHHHHHHHHh
Confidence 899998874 345788999999999998753 56888643 67889999888864
No 194
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.89 E-value=2.8e-21 Score=191.86 Aligned_cols=307 Identities=16% Similarity=0.109 Sum_probs=192.2
Q ss_pred CEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHhhccC--CCeEEecCCHHHHHHHHHHHH
Q 013008 98 REYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSF--ADRVFFSNTGTEANEAAIKFA 175 (451)
Q Consensus 98 ~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~e~v~~~~sG~eA~~~al~~a 175 (451)
..++||..+.. +++ .+|.+.+++.+.+..... |+.....+|.+.++++++ .++|++++|+++++..+++++
T Consensus 22 ~~~i~l~~~~n--~~~-~~~~~~~a~~~~~~~~~~----Y~~~~~~~Lr~aia~~~~v~~~~I~it~G~~~~i~~~~~~l 94 (360)
T PRK07392 22 DAILDFSASIN--PLG-PPESVIAAIQSALSALRH----YPDPDYRELRLALAQHHQLPPEWILPGNGAAELLTWAGREL 94 (360)
T ss_pred ccEEEeCCcCC--CCC-CCHHHHHHHHHHHHHhhc----CCCcCHHHHHHHHHHHhCcChhhEEECCCHHHHHHHHHHHh
Confidence 36889887644 455 678999998887765222 222223467777777765 789999999999999988864
Q ss_pred HHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeE-eeCCCHHHHHHhcCCCCeEEEEEcc
Q 013008 176 RKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNF-VEYGNIEATRKLIQPGKTAAVFVEP 254 (451)
Q Consensus 176 ~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~d~~~le~~l~~~~~aavi~ep 254 (451)
. +++.|++.+|+|.++.......+.... . .+..++..+ ....|++.+++... .....++++|
T Consensus 95 ~------------~g~~vlv~~P~y~~~~~~~~~~g~~~~-~---v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~nP 157 (360)
T PRK07392 95 A------------QLRAVYLITPAFGDYRRALRAFGATVK-E---LPLPLDQPSPGLTLRLQTLPPQLT-PNDGLLLNNP 157 (360)
T ss_pred C------------CCCeEEEECCCcHHHHHHHHHcCCeEE-E---EecccccCCcccccCHHHHHHhcc-CCCEEEEeCC
Confidence 3 467899999999888755544332111 1 111111100 00125666665442 2344555556
Q ss_pred ccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCccccccc-ccccC---CCcceeeeccccc-CCccccccccc
Q 013008 255 IQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWA-HEHYG---IFPDIMTLAKPLA-GGLPIGAALVT 329 (451)
Q Consensus 255 ~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~-~~~~~---~~pdi~t~sK~lg-~G~~iG~v~~~ 329 (451)
++++|.+. + .++|.++|+++++ +|+||+|.+|.+.+.... ....+ ...-+.+|||.++ +|+|+||++++
T Consensus 158 -~NPTG~~~-~---~~~l~~l~~~~~~-~IiDE~y~~~~~~~~~~s~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~~v~~ 231 (360)
T PRK07392 158 -HNPTGKLW-S---REAILPLLEQFAL-VVVDEAFMDFLPPDAEQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYAIAH 231 (360)
T ss_pred -CCCCCCCc-C---HHHHHHHHHHCCE-EEEECchhhhccCccccchHHHhhcCCCEEEEEechhhhcCCchheeeeeCC
Confidence 44455544 5 4567777888885 666999998854442111 11111 1223448999999 89999999999
Q ss_pred HHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH--------------HHhCCCCcceecccceeEEEEecCC
Q 013008 330 EKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS--------------KLARNPHVKDVRGLGLIIGIEFDVS 395 (451)
Q Consensus 330 ~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~--------------~~~~~~~~~~v~g~G~~~~~~~~~~ 395 (451)
+++++.+.... ..++.+.+++.++.++|+. ..+.++ .+++++.+....+.|.++++.+..+
T Consensus 232 ~~~~~~~~~~~--~~~~~s~~~q~~~~~~l~~---~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~fl~~~~~~~ 306 (360)
T PRK07392 232 PDRLQRWQQWR--DPWPVNGLAAAAAIAALAD---RDFQQQTWAWLPPAREALFQGLASLPGLTPLPSAANFLLVQSQGS 306 (360)
T ss_pred HHHHHHHHhhC--CCCCCCHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHHHHHHhCCCcEECCCCCCEEEEEcCCC
Confidence 99988875332 3467789999988888752 222221 2344554444456688888877555
Q ss_pred hHHHHHHHH-HCCceeeecCC-----CCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 013008 396 ATPVVDACR-DSGLLVLTAGK-----GNVVRLVPPLIISEQELDQAVEILCKT 442 (451)
Q Consensus 396 ~~~~~~~l~-~~Gv~~~~~~~-----~~~iri~~~~~~t~e~i~~~l~~l~~~ 442 (451)
..++.+.++ ++||.+.|+.. .+++||+.. +.++.+++.+.|++.
T Consensus 307 ~~~l~~~ll~~~gv~v~pg~~f~~~~~~~iRi~~~---~~~~~~~l~~al~~~ 356 (360)
T PRK07392 307 ALQLQEKLLQQHRILIRDCLSFPELGDRYFRVAVR---TEAENQRLLEALAAI 356 (360)
T ss_pred HHHHHHHHHhhCCEEEEeCCCCCCCCCCEEEEEeC---CHHHHHHHHHHHHHH
Confidence 678888865 57999998742 257888644 344445555555443
No 195
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.89 E-value=1.8e-21 Score=190.93 Aligned_cols=272 Identities=14% Similarity=0.062 Sum_probs=174.1
Q ss_pred CCCHHHHHHHHHHhhccC--CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCC
Q 013008 137 YYSIPQIELAKRLVACSF--ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKE 214 (451)
Q Consensus 137 ~~~~~~~~l~~~l~~~~~--~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~ 214 (451)
|+.+...+|.++++++++ .++|++++|+++++..++++ . + + ++|++.+|+|..+...+...+...
T Consensus 37 Yp~~~~~~lr~~ia~~~~~~~~~I~it~Gs~~~l~~~~~~-~---~--------~-~~vv~~~P~y~~y~~~~~~~G~~v 103 (332)
T PRK06425 37 YPEISYTDIEDQIKIYTQGLKIKVLIGPGLTHFIYRLLSY-I---N--------V-GNIIIVEPNFNEYKGYAFTHGIRI 103 (332)
T ss_pred CcCcCHHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHHH-h---C--------C-CcEEEeCCChHHHHHHHHHcCCeE
Confidence 555557899999999887 77899999999999998863 2 1 3 368888999988876554433221
Q ss_pred CcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCc
Q 013008 215 HYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGR 294 (451)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr 294 (451)
. . .|... . -.|.+.+++ .+...+++++|.| ++|. +.+.+.+++|.++|++||++||+||+|..|..
T Consensus 104 ~-~---vp~~~-~----~~~~~~l~~---~~~k~v~l~nP~N-PTG~-~~s~~~~~~l~~~a~~~~~~iI~DE~Y~~~~~ 169 (332)
T PRK06425 104 S-A---LPFNL-I----NNNPEILNN---YNFDLIFIVSPDN-PLGN-LISRDSLLTISEICRKKGALLFIDEAFIDFVP 169 (332)
T ss_pred E-E---EeCCc-c----cCcHHHHhh---cCCCEEEEeCCCC-CcCC-ccCHHHHHHHHHHHHHcCCEEEEecchhcccc
Confidence 1 1 11111 0 013444432 2223444455544 4454 57899999999999999999999999988843
Q ss_pred ccccccccc---cCCCcceeeeccccc-CCcccccccccHHHHhhccCCCccCCCCCcHHHHHHHHHHHH--H-hc--Ch
Q 013008 295 TGYLWAHEH---YGIFPDIMTLAKPLA-GGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLD--K-IS--NP 365 (451)
Q Consensus 295 ~G~~~~~~~---~~~~pdi~t~sK~lg-~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~--~-~~--~~ 365 (451)
.+....... ++...-+.+|||+++ +|+|+||+++++++++.+... ...+..+.+++++.. ..+ . ++ ..
T Consensus 170 ~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiGy~v~~~~li~~l~~~--~~~~~~~~~~~~~l~-~~~~~~~~~~~~~ 246 (332)
T PRK06425 170 NRAEEDVLLNRSYGNVIIGRSLTKILGIPSLRIGYIATDDYNMKISRKI--TEPWSVCDPAIDFIR-SIDLDYVAKHSLD 246 (332)
T ss_pred ccchhHHHHhccCCCEEEEeecHHhcCCchhhheeeecCHHHHHHHHHc--CCCCccCHHHHHHHH-HhhhHHHHHHHHH
Confidence 331111111 112223448999999 899999999999999888643 223444444433221 111 0 00 00
Q ss_pred HHHHH------HHhCCCCccee-cccceeEEEEecCChHHHHHHHHHCCceeeecCC-----CCEEEEeCCCCCCHHHHH
Q 013008 366 AFLAS------KLARNPHVKDV-RGLGLIIGIEFDVSATPVVDACRDSGLLVLTAGK-----GNVVRLVPPLIISEQELD 433 (451)
Q Consensus 366 ~~~~~------~~~~~~~~~~v-~g~G~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~-----~~~iri~~~~~~t~e~i~ 433 (451)
.+.++ .++++. +..+ .+.|.++++.+. +..++.+.|+++||.+.|+.. .+++|++.. +.++.+
T Consensus 247 ~~~~~r~~l~~~L~~~g-~~~~~~~~g~f~~~~~~-~~~~~~~~l~~~gi~v~~~~~f~~~~~~~iRis~~---~~~~~~ 321 (332)
T PRK06425 247 IMENERSYLINNLEAMG-FRAAGDPSANFITFMIP-DAHDFYSYLLKNGILVRLLDDYECLGEQYIRIAIR---RRSFNI 321 (332)
T ss_pred HHHHHHHHHHHHHHHCC-CEECCCCCceEEEEEcC-CHHHHHHHHHHCCeEEEECCCCCCCCCCEEEEEeC---CHHHHH
Confidence 11111 223332 2223 456888888875 578899999999999998632 257898643 788999
Q ss_pred HHHHHHHHHH
Q 013008 434 QAVEILCKTL 443 (451)
Q Consensus 434 ~~l~~l~~~l 443 (451)
+++++|++++
T Consensus 322 ~l~~al~~~~ 331 (332)
T PRK06425 322 KLVNALRNFL 331 (332)
T ss_pred HHHHHHHHHh
Confidence 9999998765
No 196
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.89 E-value=9.6e-22 Score=194.38 Aligned_cols=296 Identities=17% Similarity=0.178 Sum_probs=193.3
Q ss_pred EEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHhhccC--CCeEEecCCHHHHHHHHHHHHH
Q 013008 99 EYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSF--ADRVFFSNTGTEANEAAIKFAR 176 (451)
Q Consensus 99 ~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~e~v~~~~sG~eA~~~al~~a~ 176 (451)
..+|+.+|-. ++| .+|.+. ... .+.|+.....+|.+++++.++ .++|++++|++|++..++++..
T Consensus 29 ~~~~l~~Nen--p~~-~~~~~~------~~~----~~~Yp~~~~~~l~~~~a~~~g~~~~~I~~~~Gs~e~i~~~~~~~~ 95 (351)
T PRK01688 29 GDVWLNANEY--PTA-VEFQLT------QQT----LNRYPECQPKAVIENYAAYAGVKPEQVLVSRGADEGIELLIRAFC 95 (351)
T ss_pred CceEecCCCC--CCC-CChhhc------ccc----cccCCCCChHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhc
Confidence 3588877755 565 334321 111 133444446789999999887 7899999999999999998654
Q ss_pred HHhhhcCCCCCCCC-ceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEccc
Q 013008 177 KFQRHSNPDSKEPA-TEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPI 255 (451)
Q Consensus 177 ~~~~~~~~~~~~~~-~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~ 255 (451)
. ++ +.|++.+|+|..+...+... |..... .+...+.. .|++++++.+. +...+++++|.
T Consensus 96 ~-----------~g~~~vli~~P~y~~y~~~~~~~-G~~~~~---v~~~~~~~----~d~~~l~~~~~-~~~lv~l~nPn 155 (351)
T PRK01688 96 E-----------PGKDAILYCPPTYGMYSVSAETI-GVEIRT---VPTLDNWQ----LDLPAIADNLD-GVKVVYVCSPN 155 (351)
T ss_pred C-----------CCCCEEEEcCCCHHHHHHHHHHc-CCEEEE---eecCCCCC----CCHHHHHHhcc-CCcEEEEeCCC
Confidence 1 34 78999999998765433222 211111 12211111 27899988873 33344555554
Q ss_pred cCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccccccCCCcce---eeeccccc-CCcccccccccHH
Q 013008 256 QGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDI---MTLAKPLA-GGLPIGAALVTEK 331 (451)
Q Consensus 256 ~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi---~t~sK~lg-~G~~iG~v~~~~~ 331 (451)
| ++|. ..+.+.+++|.+.|++ ++++|+||+|..|..... ........+.+ -||||++| +|+|+||++++++
T Consensus 156 N-PTG~-~~~~~~l~~l~~~~~~-~~~vivDEay~~f~~~~s--~~~~~~~~~n~iv~rSfSK~~glaGlRiGy~i~~~~ 230 (351)
T PRK01688 156 N-PTGN-LINPQDLRTLLELTRG-KAIVVADEAYIEFCPQAS--LAGWLAEYPHLVILRTLSKAFALAGLRCGFTLANEE 230 (351)
T ss_pred C-CCCC-CCCHHHHHHHHHhCCC-CcEEEEECchhhcCCCCC--hHHHHhhCCCEEEEecchHhhcCHHHHHhHHhCCHH
Confidence 4 4454 5688899999999986 689999999988842111 11111222343 37999998 6999999999999
Q ss_pred HHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH--------------HHhCCCCcc-eecccceeEEEEecCCh
Q 013008 332 VASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS--------------KLARNPHVK-DVRGLGLIIGIEFDVSA 396 (451)
Q Consensus 332 i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~--------------~~~~~~~~~-~v~g~G~~~~~~~~~~~ 396 (451)
+++.+... ...|+.+.++++++.++|+.. ..++.++ .++.++.+. ..+..+.++++.+. +.
T Consensus 231 ~i~~l~~~--~~~~~v~~~~~~~a~~~L~~~-~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~ps~~nfi~~~~~-~~ 306 (351)
T PRK01688 231 VINLLLKV--IAPYPLSTPVADIAAQALSPQ-GIAAMRERVAEINANRQWLIAALKEIPCVEQVFDSETNYILARFT-AS 306 (351)
T ss_pred HHHHHHhc--cCCCCCCHHHHHHHHHHHhcc-hHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCCCCcEEEEEcC-CH
Confidence 99888643 234667777777777777521 0111111 234444332 34566788888774 56
Q ss_pred HHHHHHHHHCCceeeecC----CCCEEEEeCCCCCCHHHHHHHHHHH
Q 013008 397 TPVVDACRDSGLLVLTAG----KGNVVRLVPPLIISEQELDQAVEIL 439 (451)
Q Consensus 397 ~~~~~~l~~~Gv~~~~~~----~~~~iri~~~~~~t~e~i~~~l~~l 439 (451)
.++.+.|+++||.+.+++ ..+++|+++. +++++++++++|
T Consensus 307 ~~l~~~L~~~gi~vr~~~~~~~~~~~iRis~~---~~~e~~~l~~al 350 (351)
T PRK01688 307 SAVFKSLWDQGIILRDQNKQPGLSNCLRITIG---TREECQRVIDAL 350 (351)
T ss_pred HHHHHHHHHCCeEEEECCCcCCCCCeEEEeCC---CHHHHHHHHHhh
Confidence 789999999999998653 1367899754 789999999877
No 197
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.89 E-value=3e-21 Score=190.37 Aligned_cols=278 Identities=18% Similarity=0.156 Sum_probs=185.0
Q ss_pred HHHHHHHHhhccC----CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcC
Q 013008 142 QIELAKRLVACSF----ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYR 217 (451)
Q Consensus 142 ~~~l~~~l~~~~~----~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~ 217 (451)
+..+++.+....+ .+.+++++||++|+..++..+.. ++++|++.+++|+++............
T Consensus 42 ~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~~~~~~-----------~g~~vl~~~~~~~~~~~~~~~~~~~~~-- 108 (350)
T cd00609 42 REAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLLRALLN-----------PGDEVLVPDPTYPGYEAAARLAGAEVV-- 108 (350)
T ss_pred HHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhCC-----------CCCEEEEcCCCchhHHHHHHHCCCEEE--
Confidence 4455555554433 56899999999999999997652 578999999998876544332221110
Q ss_pred CCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccc
Q 013008 218 SPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGY 297 (451)
Q Consensus 218 ~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~ 297 (451)
..+........ .+.+.++... ..++++|++++.++++|. .++.+.+++|+++|+++|+++|+||+|+++...+.
T Consensus 109 --~i~~~~~~~~~--~~~~~~~~~~-~~~~~~v~i~~~~~~tG~-~~~~~~l~~l~~~~~~~~~~~ivD~a~~~~~~~~~ 182 (350)
T cd00609 109 --PVPLDEEGGFL--LDLELLEAAK-TPKTKLLYLNNPNNPTGA-VLSEEELEELAELAKKHGILIISDEAYAELVYDGE 182 (350)
T ss_pred --EEecccccCCc--cCHHHHHhhc-CccceEEEEECCCCCCCc-ccCHHHHHHHHHHHHhCCeEEEEecchhhceeCCc
Confidence 00111111000 0124555544 457889999997777776 56888999999999999999999999988765554
Q ss_pred cc----cccccCCCcceeeeccccc-CCcccccccccH-HHHhhccCCCccCCCCCcHHHHHHHHHHHHHhc--ChHHHH
Q 013008 298 LW----AHEHYGIFPDIMTLAKPLA-GGLPIGAALVTE-KVASAINYGDHGSTFAGSPLVCNAAIAVLDKIS--NPAFLA 369 (451)
Q Consensus 298 ~~----~~~~~~~~pdi~t~sK~lg-~G~~iG~v~~~~-~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~--~~~~~~ 369 (451)
.. .....+....+.+++|.++ +|+++|++++++ ++++.+.......+++.++..+.++.++|+... .+...+
T Consensus 183 ~~~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 262 (350)
T cd00609 183 PPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPEELLERLKKLLPYTTSGPSTLSQAAAAAALDDGEEHLEELRE 262 (350)
T ss_pred ccccccCcCccCcEEEEeecccccCCcccceEEEecCHHHHHHHHHHHHHhcccCCChHHHHHHHHHHhCcHHHHHHHHH
Confidence 32 1122222333447899998 789999999998 888888655445567788888888888887542 111111
Q ss_pred H----------HHhCCCCcc-eecccceeEEEEecC--ChHHHHHHHHHCCceeeecC-----CCCEEEEeCCCCCCHHH
Q 013008 370 S----------KLARNPHVK-DVRGLGLIIGIEFDV--SATPVVDACRDSGLLVLTAG-----KGNVVRLVPPLIISEQE 431 (451)
Q Consensus 370 ~----------~~~~~~~~~-~v~g~G~~~~~~~~~--~~~~~~~~l~~~Gv~~~~~~-----~~~~iri~~~~~~t~e~ 431 (451)
+ .+++.+... .....|.+.++.+.. ....+.+.|.++|+.+.++. .+..+|++++.. +||
T Consensus 263 ~~~~~~~~l~~~L~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~gi~i~~~~~~~~~~~~~iRi~~~~~--~~~ 340 (350)
T cd00609 263 RYRRRRDALLEALKELGPLVVVKPSGGFFLWLDLPEGDDEEFLERLLLEAGVVVRPGSAFGEGGEGFVRLSFATP--EEE 340 (350)
T ss_pred HHHHHHHHHHHHHHhcCCccccCCCccEEEEEecCCCChHHHHHHHHHhCCEEEecccccccCCCCeEEEEeeCC--HHH
Confidence 1 233333222 244567888887743 34556666667799998763 236899988876 999
Q ss_pred HHHHHHHHH
Q 013008 432 LDQAVEILC 440 (451)
Q Consensus 432 i~~~l~~l~ 440 (451)
+++++++|+
T Consensus 341 i~~~~~al~ 349 (350)
T cd00609 341 LEEALERLA 349 (350)
T ss_pred HHHHHHHhh
Confidence 999999886
No 198
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.89 E-value=7.6e-21 Score=189.35 Aligned_cols=292 Identities=12% Similarity=0.067 Sum_probs=186.7
Q ss_pred HHHHHHHHHhhcccccCC-----C-----CCHHHHHHHHHHhhccCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCC
Q 013008 119 WIKAVVDQANVLTHVSNM-----Y-----YSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKE 188 (451)
Q Consensus 119 v~~a~~~~~~~~~~~~~~-----~-----~~~~~~~l~~~l~~~~~~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~ 188 (451)
+.++..+++++++.++.. + .++...++.+.++++++.+.+++++||++|+..+++.+..
T Consensus 20 ~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~e~lA~~~g~~~~~i~~g~~~a~~~~~~~l~~----------- 88 (370)
T TIGR02539 20 LTEAARKALVEFGDGYSVCDFCGGRLDQITKPPIHDFLEDLAEFLGMDEARVTHGAREGKFAVMHALCK----------- 88 (370)
T ss_pred CcHHHHHHHHHHhhccccccccccccccccchHHHHHHHHHHHHhCCCceEEECChHHHHHHHHHHhhC-----------
Confidence 455566666555433211 1 1234667888899999988899999999999999987651
Q ss_pred CCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCC-------CHHHHHHhcCC------CCeEEEEEccc
Q 013008 189 PATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYG-------NIEATRKLIQP------GKTAAVFVEPI 255 (451)
Q Consensus 189 ~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------d~~~le~~l~~------~~~aavi~ep~ 255 (451)
+++.|++..+.++... ..+...+. .+..++++ |+++|++.+++ .++.+|+++.+
T Consensus 89 ~gd~Vl~~~~~h~s~~-~~~~~~g~------------~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p 155 (370)
T TIGR02539 89 EGDWVVLDGLAHYTSY-VAAERAGL------------NVKEVPHTGHPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHV 155 (370)
T ss_pred CCCEEEECCcccHHHH-HHHHHcCC------------EEEEEecCCcccCCcCHHHHHHHHHHhhhccCCCcEEEEEECC
Confidence 5788888666654433 33233222 12233332 89999998852 25667777777
Q ss_pred cCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccccccCCCcce--eeecccccCCcccccccccHHHH
Q 013008 256 QGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDI--MTLAKPLAGGLPIGAALVTEKVA 333 (451)
Q Consensus 256 ~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi--~t~sK~lg~G~~iG~v~~~~~i~ 333 (451)
+++.|.+.+ +++|.++|++||+++|+||+|. +|..+.. ...+ .+|+ .+++|++++|.|+|+++++++++
T Consensus 156 ~~~~G~~~~----l~~i~~la~~~~~~livDea~~-~g~~~~~--~~~~--~~di~v~s~sK~~~~~g~~G~l~~~~~~i 226 (370)
T TIGR02539 156 DGEYGNLPD----AGKVAKVCREKGVPLLLNCAYT-VGRMPVS--AKEI--GADFIVGSGHKSMAASGPCGVLGMSEEWE 226 (370)
T ss_pred CCCCccccC----HHHHHHHHHHcCCeEEEECccc-cCCcCCC--HHHc--CCCEEEeeCcccccCCCCEEEEEECHHHH
Confidence 777888777 9999999999999999999996 4332211 1112 3454 47899998777899999999999
Q ss_pred hhccCCCccCCC--------CCcHHHHHHHHHHHHHhcC-h-HH---HHH------HHhCCCCc--ceecccceeEEEEe
Q 013008 334 SAINYGDHGSTF--------AGSPLVCNAAIAVLDKISN-P-AF---LAS------KLARNPHV--KDVRGLGLIIGIEF 392 (451)
Q Consensus 334 ~~~~~~~~~~t~--------~~~~~~~aaa~aal~~~~~-~-~~---~~~------~~~~~~~~--~~v~g~G~~~~~~~ 392 (451)
+.+........+ .....++.++.++++...+ - .+ .+. .++..+.. ........++.+.+
T Consensus 227 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~l~~~~~~~~~~~~l~~~L~~~g~~~~~~~~s~t~~v~~~~ 306 (370)
T TIGR02539 227 DIVLRKSRYSPVKEVELLGCTSRGAPIVTMMASFPHVVERVKRWDEEVKKTRWFVAELEDIGFIQLGQKPKEHDLVKFET 306 (370)
T ss_pred hhhcccccCCccceeeeecccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEccCCCcCceEEEEC
Confidence 987643221111 1112245555666653211 0 01 010 12222211 11133455665554
Q ss_pred cC----------ChHHHHHHHHHCCce-eeecCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 013008 393 DV----------SATPVVDACRDSGLL-VLTAGKGNVVRLVPPLIISEQELDQAVEILCKTLPV 445 (451)
Q Consensus 393 ~~----------~~~~~~~~l~~~Gv~-~~~~~~~~~iri~~~~~~t~e~i~~~l~~l~~~l~~ 445 (451)
.. ....+.+.|.++||+ +.++.. +.+|+++ ..++++|+++++++|++++++
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~L~e~GI~~ir~~~~-~~iRis~-~~~t~e~i~~l~~~L~~~~~~ 368 (370)
T TIGR02539 307 PGFHEIAQKHKRRGYFLYEELKKRGIHGIRSGQT-KYFKLSV-YGLTKEQVEYVVDSFEEIVEE 368 (370)
T ss_pred CchhHHhhhhccccHHHHHHHHhCCCccccCCcc-eEEEEEe-cCCCHHHHHHHHHHHHHHHHh
Confidence 21 234688999999997 665433 6899987 468999999999999998765
No 199
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.89 E-value=2e-20 Score=188.41 Aligned_cols=318 Identities=15% Similarity=0.143 Sum_probs=204.6
Q ss_pred CCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCC-------HHHHHHHHHHhhccC---CCeEEecCCHHH
Q 013008 97 GREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYS-------IPQIELAKRLVACSF---ADRVFFSNTGTE 166 (451)
Q Consensus 97 G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~-------~~~~~l~~~l~~~~~---~e~v~~~~sG~e 166 (451)
+.-|+|..+ .|..++.+.+++.+.+...........+ ....++.+.++++++ .+.|++++|+++
T Consensus 16 ~~iyld~a~------~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~~i~~t~g~t~ 89 (398)
T TIGR03392 16 GTVYLDSAA------TALKPQAVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFLNAPDAENIVWTRGTTE 89 (398)
T ss_pred CeEEeeCcc------ccCCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChHH
Confidence 467888655 4557788999998887643211111111 224567788888887 368999999999
Q ss_pred HHHHHHHHHHH-HhhhcCCCCCCCCceEEEEcCCccCChhhhh---hccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhc
Q 013008 167 ANEAAIKFARK-FQRHSNPDSKEPATEFVSFTNSFHGRTMGAL---ALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLI 242 (451)
Q Consensus 167 A~~~al~~a~~-~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l 242 (451)
++..+++.... .. .++++||+.++.|++...... ...|.... ..+...+.. .|++++++++
T Consensus 90 ~l~~~~~~~~~~~~--------~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~---~v~~~~~~~----~~~~~l~~~i 154 (398)
T TIGR03392 90 SINLVAQSYARPRL--------QPGDEIIVSEAEHHANLIPWLMVAQQTGAKVV---KLPIGADLL----PDIRQLPELL 154 (398)
T ss_pred HHHHHHHHhhhccC--------CCCCEEEECCcchhHHHHHHHHHHHHcCcEEE---EEecCCCCC----cCHHHHHHHh
Confidence 99999886531 01 157899999999876322111 11121110 011111110 2789999998
Q ss_pred CCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccccccCCCcceeeec--ccccCC
Q 013008 243 QPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLA--KPLAGG 320 (451)
Q Consensus 243 ~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~t~s--K~lg~G 320 (451)
.+ ++++|++..+++++|.+.+ +++|.++|++||+++|+|++|. +|.. ..+.....+|+.++| |.+|.
T Consensus 155 ~~-~t~lv~i~~~~n~tG~~~~----~~~i~~~~~~~~~~~ivD~a~~-~~~~----~~~~~~~~~d~~~~s~~K~~gp- 223 (398)
T TIGR03392 155 TP-RTRILALGQMSNVTGGCPD----LARAITLAHQYGAVVVVDGAQG-VVHG----PPDVQALDIDFYAFSGHKLYGP- 223 (398)
T ss_pred cc-CceEEEEECccccccccCC----HHHHHHHHHHcCCEEEEEhhhh-cCCC----CCChhhcCCCEEEEecccccCC-
Confidence 65 4677777777777787777 8999999999999999999995 3222 111123357888888 97763
Q ss_pred cccccccccHHHHhhccCCCccC------------------CC---CCcHHHHHHHHHHHHHhcChH---HHHH------
Q 013008 321 LPIGAALVTEKVASAINYGDHGS------------------TF---AGSPLVCNAAIAVLDKISNPA---FLAS------ 370 (451)
Q Consensus 321 ~~iG~v~~~~~i~~~~~~~~~~~------------------t~---~~~~~~~aaa~aal~~~~~~~---~~~~------ 370 (451)
..+|++++++++++.+.+...+. .| +.|..+.+++.++++.+.+.+ ..++
T Consensus 224 ~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~l~~~g~~~i~~~~~~l~~ 303 (398)
T TIGR03392 224 TGIGVLYGKTELLEAMPPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWLTDIDIAAAEAWSVSLAD 303 (398)
T ss_pred CceEEEEEcHHHHhhCCCeecCCceEeeccccccccCCChhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 24899999999887765321010 01 234456666667777653322 1111
Q ss_pred ----HHhCCCCccee-cccceeEEEEec-CChHHHHHHHHHCCceeeecC-----------CCCEEEEeCCCCCCHHHHH
Q 013008 371 ----KLARNPHVKDV-RGLGLIIGIEFD-VSATPVVDACRDSGLLVLTAG-----------KGNVVRLVPPLIISEQELD 433 (451)
Q Consensus 371 ----~~~~~~~~~~v-~g~G~~~~~~~~-~~~~~~~~~l~~~Gv~~~~~~-----------~~~~iri~~~~~~t~e~i~ 433 (451)
.++.++.+... .....++.+.+. ....++.+.|.++||.+.++. .++.+|+++....|++|++
T Consensus 304 ~l~~~l~~l~g~~~~~~~~~~i~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~g~~~~iRvS~~~~~t~~ei~ 383 (398)
T TIGR03392 304 LAEERLAQLPGFRSFRCPGSSLLAFDFAGVHHSDLAALLAESGIALRAGQHCAQPLMAALGVSGTLRASFAPYNTQQDVD 383 (398)
T ss_pred HHHHHHhcCCCeEEeCCCCCcEEEEEeCCcCHHHHHHHHHhCCEEEecCccchHHHHHHhCCCCEEEEEeeccCCHHHHH
Confidence 22344433222 123456666663 446789999999999988653 1357999999999999999
Q ss_pred HHHHHHHHHHHHH
Q 013008 434 QAVEILCKTLPVL 446 (451)
Q Consensus 434 ~~l~~l~~~l~~~ 446 (451)
++++.|+++++.+
T Consensus 384 ~l~~~l~~~~~~~ 396 (398)
T TIGR03392 384 ALVDAVGAALELL 396 (398)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999988764
No 200
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.88 E-value=6.2e-21 Score=187.56 Aligned_cols=302 Identities=15% Similarity=0.141 Sum_probs=190.7
Q ss_pred CCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHhhccC--CCeEEecCCHHHHHHHHHH
Q 013008 96 EGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSF--ADRVFFSNTGTEANEAAIK 173 (451)
Q Consensus 96 ~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~e~v~~~~sG~eA~~~al~ 173 (451)
.|..++||..|.. +++ .+|.+.+++.+.+..... ..++.....+|.+.++++++ .++|++++|+++++..+++
T Consensus 16 ~~~~~i~l~~~~~--~~~-~~~~~~~~~~~~~~~~~~--~~Y~~~g~~~lr~~ia~~~~~~~~~I~~t~G~~~~l~~~~~ 90 (337)
T PRK03967 16 EGNYRIWLDKNEN--PFD-LPEELKEEIFEELKRVPF--NRYPHITSDPLREAIAEFYGLDAENIAVGNGSDELISYLVK 90 (337)
T ss_pred CCCceEEecCCCC--CCC-CCHHHHHHHHHHhhcCcc--ccCCCCCHHHHHHHHHHHhCcCcceEEEcCCHHHHHHHHHH
Confidence 4556788888754 454 568899999887754211 22333335677788888776 7899999999999987766
Q ss_pred HHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEc
Q 013008 174 FARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVE 253 (451)
Q Consensus 174 ~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~e 253 (451)
+. +++.|++.+|+|..+.... ...+..... .+...+.. -|++.+++.+.+ ....+++.
T Consensus 91 ~~-------------~gd~V~v~~P~y~~~~~~~-~~~g~~~~~---v~~~~~~~----~d~~~l~~~~~~-~~~v~~~~ 148 (337)
T PRK03967 91 LF-------------EGKHIVITPPTFGMYSFYA-KLNGIPVID---VPLKEDFT----IDGERIAEKAKN-ASAVFICS 148 (337)
T ss_pred Hh-------------CCCeEEEeCCChHHHHHHH-HHcCCeEEE---eecCCCCC----cCHHHHHHhccC-CCEEEEeC
Confidence 32 2788999999997654322 222221111 11111111 267888877642 33445555
Q ss_pred cccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCccccccc-ccccCCCcceeeeccccc-CCcccccccccHH
Q 013008 254 PIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWA-HEHYGIFPDIMTLAKPLA-GGLPIGAALVTEK 331 (451)
Q Consensus 254 p~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~-~~~~~~~pdi~t~sK~lg-~G~~iG~v~~~~~ 331 (451)
| ++++|.. ++. ++|.++| ++++++|+||+|.+|.. ..... .+...-..-+.+|||.++ .|+|+||++++++
T Consensus 149 P-~NPtG~~-~~~---~~l~~i~-~~~~~ii~De~y~~~~~-~~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~iv~~~~ 221 (337)
T PRK03967 149 P-NNPTGNL-QPE---EEILKVL-ETGKPVVLDEAYAEFSG-KSLIGLIDEYPNLILLRTFSKAFGLAGIRAGYAIANEE 221 (337)
T ss_pred C-CCCCCCC-CCH---HHHHHHH-hcCCEEEEECchhhhcc-cchHHHHhhCCCEEEEecchHhhcchhhhheeeecCHH
Confidence 6 4445554 454 4555666 47999999999988732 11111 111111223347999999 7999999999999
Q ss_pred HHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH-----------HHhCCCCcceecccceeEEEEecCChHHHH
Q 013008 332 VASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS-----------KLARNPHVKDVRGLGLIIGIEFDVSATPVV 400 (451)
Q Consensus 332 i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~-----------~~~~~~~~~~v~g~G~~~~~~~~~~~~~~~ 400 (451)
+++.+.... ..++.+.+++.++.++|+. .++..+ +.+.+... ..++.|.++|+.+ .+.
T Consensus 222 ~i~~~~~~~--~~~~~~~~~q~~~~~~l~~---~~~~~~~~~~~~~~r~~l~~~L~~~-~~~~~~~~~~~~~-----~~~ 290 (337)
T PRK03967 222 IIDALYRIK--PPFSLNILTMKIVRLALDH---YDLIEERIDYIIKERERVRRELGEY-AYPSDANFLLLKL-----DAY 290 (337)
T ss_pred HHHHHHhhc--CCCCCCHHHHHHHHHHHhC---HHHHHHHHHHHHHHHHHHHHHhccC-cCCCCCcEEEEhH-----HHH
Confidence 988876432 3456788899998888862 222211 22222211 2345677877755 278
Q ss_pred HHHHHCCceeeecCC--CCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 013008 401 DACRDSGLLVLTAGK--GNVVRLVPPLIISEQELDQAVEILCKTLPV 445 (451)
Q Consensus 401 ~~l~~~Gv~~~~~~~--~~~iri~~~~~~t~e~i~~~l~~l~~~l~~ 445 (451)
+.|+++||.+.+... .+.+|+++. +.++.+++++.|+++.+.
T Consensus 291 ~~l~~~gi~v~~~~~~~~~~~Ri~~~---~~~~~~~l~~~l~~~~~~ 334 (337)
T PRK03967 291 DYLLENGIVVRKLSGRLEGHIRVTVG---KREENDEFIKALKEIKEG 334 (337)
T ss_pred HHHHHCCEEEEeCCCCCCCeEEEecC---CHHHHHHHHHHHHHHHHh
Confidence 889999999976532 367888644 667888888888876643
No 201
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=99.88 E-value=4.5e-21 Score=193.16 Aligned_cols=325 Identities=14% Similarity=0.091 Sum_probs=192.4
Q ss_pred CCEEEeeccCcccccCCCCCHHHHHHHHHHHhhccc--ccCCC-CCHHHHHHHHHHhhc-----cCCCeEEecCCHHHHH
Q 013008 97 GREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTH--VSNMY-YSIPQIELAKRLVAC-----SFADRVFFSNTGTEAN 168 (451)
Q Consensus 97 G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~--~~~~~-~~~~~~~l~~~l~~~-----~~~e~v~~~~sG~eA~ 168 (451)
|..++|+..|.. .++ .+|.+.+++.+.+.+... ....| +.....+|.+.++++ ...++|++|+|+++|+
T Consensus 32 ~~~~i~l~~~~~--~~~-~~~~v~~~~~~~~~~~~~~~~~~~Y~p~~g~~~lr~aia~~~~~~~~~~d~I~it~Ga~~al 108 (402)
T TIGR03542 32 SADIIRLGIGDT--TQP-LPASVIEAFHNAVDELASEETFRGYGPEQGYPFLREAIAENDYRGRIDPEEIFISDGAKCDV 108 (402)
T ss_pred CCCeEEcCCCCC--CCC-CCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHhcCCCHHHEEECCCcHHHH
Confidence 567888888765 233 468889999888765311 00112 222234444555543 3478999999999999
Q ss_pred HHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHH-HhcCCCCe
Q 013008 169 EAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATR-KLIQPGKT 247 (451)
Q Consensus 169 ~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le-~~l~~~~~ 247 (451)
...+.+ . . ++++|++.+|+|.++...+...+. ...... ......+..++.++-+.+. +..+..++
T Consensus 109 ~~l~~l-~---~--------~gd~Vlv~~P~y~~~~~~~~~~g~-~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 174 (402)
T TIGR03542 109 FRLQSL-F---G--------SDNTVAVQDPVYPAYVDSNVMAGR-AGVLDD-DGRYSKITYLPCTKENNFIPDLPEEPKI 174 (402)
T ss_pred HHHHHh-c---C--------CCCEEEEeCCCCcchHHHHHHcCC-cccccc-ccccceEEEeecchhhCCCCCccccCCc
Confidence 875432 2 1 578999999999988755443332 110000 0000022223321101110 01111245
Q ss_pred EEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccc-ccc-cccc---CCCcceeeeccccc-CCc
Q 013008 248 AAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGY-LWA-HEHY---GIFPDIMTLAKPLA-GGL 321 (451)
Q Consensus 248 aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~-~~~-~~~~---~~~pdi~t~sK~lg-~G~ 321 (451)
++|++...++++| .+++.+.+++|.++|++||++||+||+|..|...+. ... .... +....+.+|||.+| .|+
T Consensus 175 ~~i~l~nP~NPTG-~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~pGl 253 (402)
T TIGR03542 175 DIIYLCSPNNPTG-TVLTKEQLKELVDYANEHGSLILFDAAYSAFISDPSLPHSIFEIPGAKECAIEFRSFSKTAGFTGV 253 (402)
T ss_pred eEEEEeCCCCCCC-ccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccCCCCCcchhhCCCCcccEEEEecCccccCCCCc
Confidence 5555544444555 468999999999999999999999999988743332 111 1111 12333558999997 799
Q ss_pred ccccccccHHHH--------hhccCCCccCCC-CCcHHHHHHHHHHHHHhcChH-------HHHH------HHhCCCCcc
Q 013008 322 PIGAALVTEKVA--------SAINYGDHGSTF-AGSPLVCNAAIAVLDKISNPA-------FLAS------KLARNPHVK 379 (451)
Q Consensus 322 ~iG~v~~~~~i~--------~~~~~~~~~~t~-~~~~~~~aaa~aal~~~~~~~-------~~~~------~~~~~~~~~ 379 (451)
|+||++++++++ ..+.. ....++ +.+++++.++.++++.-.... +.++ .++.+. +.
T Consensus 254 RiG~~i~~~~l~~~~~~~~~~~~~~-~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~-~~ 331 (402)
T TIGR03542 254 RLGWTVVPKELTYADGHSVIQDWER-RQCTKFNGASYPVQRAAEAAYAGEGLQPILEAISYYMENARILRKALEAAG-FK 331 (402)
T ss_pred ceEEEEecHHHhhcchhhHHHHHHH-HhhhcccCCCHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHhcC-ce
Confidence 999999998876 22211 111223 467788887777664210000 0111 222332 22
Q ss_pred eecc-cceeEEEEecC--ChHHHHHHHH-HCCceeeecCC-----CCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 013008 380 DVRG-LGLIIGIEFDV--SATPVVDACR-DSGLLVLTAGK-----GNVVRLVPPLIISEQELDQAVEILCKTL 443 (451)
Q Consensus 380 ~v~g-~G~~~~~~~~~--~~~~~~~~l~-~~Gv~~~~~~~-----~~~iri~~~~~~t~e~i~~~l~~l~~~l 443 (451)
...+ .|.++|+.+.. +..++++.|+ +.||.+.|+.. .+++|++ +..+++++++++++|.++|
T Consensus 332 ~~~~~~~~f~~v~l~~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis--~~~~~~~l~~~l~~l~~~~ 402 (402)
T TIGR03542 332 VYGGEHAPYLWVKTPEGISSWDFFDFLLYQYHVVGTPGSGFGPSGEGFVRFS--AFGKRENIVEACERIKEAL 402 (402)
T ss_pred ecCCCceeEEEEECCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEE--ecCCHHHHHHHHHHHHhhC
Confidence 2334 46788998842 5678888888 46999998631 2678886 4458999999999998753
No 202
>PLN02231 alanine transaminase
Probab=99.88 E-value=3.8e-21 Score=198.47 Aligned_cols=311 Identities=13% Similarity=0.065 Sum_probs=192.0
Q ss_pred CHHHHHHHHHHHhhc-c-----cccCCCCCHHHHHHHHHHhhccC----CCeEEecCCHHHHHHHHHHHHHHHhhhcCCC
Q 013008 116 DADWIKAVVDQANVL-T-----HVSNMYYSIPQIELAKRLVACSF----ADRVFFSNTGTEANEAAIKFARKFQRHSNPD 185 (451)
Q Consensus 116 ~p~v~~a~~~~~~~~-~-----~~~~~~~~~~~~~l~~~l~~~~~----~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~ 185 (451)
+.++++.+.+.+... + ++...+....++.+++++.++.+ .++|++|+|+++|+..+++++..
T Consensus 142 p~~~i~~a~~~l~~~~~~~~~~Y~~s~G~~~lReaIA~~~~~r~g~~~~pe~I~iT~Ga~~ai~~~~~~l~~-------- 213 (534)
T PLN02231 142 SADAIERAWQILDQIPGRATGAYSHSQGIKGLRDAIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR-------- 213 (534)
T ss_pred CHHHHHHHHHHHHhcCCccccCcCCCCCcHHHHHHHHHHHHhccCCCCCcccEEEeCCHHHHHHHHHHHhcc--------
Confidence 445666666666542 1 11111223336666776666544 78999999999999999997752
Q ss_pred CCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCC-----CCeEE-EEEccccCCC
Q 013008 186 SKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQP-----GKTAA-VFVEPIQGEG 259 (451)
Q Consensus 186 ~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~-----~~~aa-vi~ep~~~~~ 259 (451)
+++|.|++.+|+|.++.......+.... . .++.++..+ .-|+++|++.++. .++++ ++++|. +++
T Consensus 214 --~~gd~Vli~~P~Y~~y~~~~~~~g~~~v-~---~~l~~~~~~--~~d~~~Le~~l~~~~~~~~~~k~ivl~nP~-NPT 284 (534)
T PLN02231 214 --SEKDGILCPIPQYPLYSASIALHGGTLV-P---YYLDEATGW--GLEISELKKQLEDARSKGITVRALVVINPG-NPT 284 (534)
T ss_pred --CCCCEEEEeCCCChhHHHHHHHcCCEEE-E---EecCcccCC--CCCHHHHHHHHHHHhhcCCCeEEEEEeCCC-CCC
Confidence 1589999999999988654433332211 1 111111000 0278999988852 13554 555554 444
Q ss_pred CccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcc-cccc-ccccc----CC---Cccee---eeccccc--CCccccc
Q 013008 260 GIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRT-GYLW-AHEHY----GI---FPDIM---TLAKPLA--GGLPIGA 325 (451)
Q Consensus 260 G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~-G~~~-~~~~~----~~---~pdi~---t~sK~lg--~G~~iG~ 325 (451)
| .+++.+.+++|.++|++||++||+||+|..+.+. +..+ .+... +. ...++ +|||.+. .|+|+||
T Consensus 285 G-~vls~e~l~~Iv~~a~~~~l~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pGlRiGy 363 (534)
T PLN02231 285 G-QVLAEENQRDIVEFCKQEGLVLLADEVYQENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYGECGKRGGY 363 (534)
T ss_pred C-cCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCcccHHHHHhhhccccCCceEEEEeccCcccccCCccceEE
Confidence 4 4689999999999999999999999999887543 3221 11111 11 11233 7899874 5999999
Q ss_pred ccc---cHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHh-------c----C-----hHHHHH------HHhCCCCcce
Q 013008 326 ALV---TEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKI-------S----N-----PAFLAS------KLARNPHVKD 380 (451)
Q Consensus 326 v~~---~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~-------~----~-----~~~~~~------~~~~~~~~~~ 380 (451)
+++ ++++++.+.... ..+.+.+.+.++++..+++.- . . ..+.++ .++.++.+..
T Consensus 364 ~~~~~~~~~l~~~l~k~~-~~~~~s~~~~Q~~~~~~l~~p~~~~~~y~~~~~~~~~i~~~~~~r~~~l~~~L~~~~gi~~ 442 (534)
T PLN02231 364 MEVTGFTSDVREQIYKVA-SVNLCSNISGQILASLVMSPPKPGDESYESYMAEKDGILSSLARRAKTLEDALNSLEGVTC 442 (534)
T ss_pred EEEecCCHHHHHHHHHHH-hhhcCCChHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcee
Confidence 976 688888775432 234456677787777766310 0 0 011111 3344555555
Q ss_pred ecccceeEEE-Eec--C------------ChHHHHHHHH-HCCceeeecCC-----C-CEEEEeCCCCCCHHHHHHHHHH
Q 013008 381 VRGLGLIIGI-EFD--V------------SATPVVDACR-DSGLLVLTAGK-----G-NVVRLVPPLIISEQELDQAVEI 438 (451)
Q Consensus 381 v~g~G~~~~~-~~~--~------------~~~~~~~~l~-~~Gv~~~~~~~-----~-~~iri~~~~~~t~e~i~~~l~~ 438 (451)
.++.|.|+.| .+. . ....++..|+ +.||.+.|+.. + .++|++ +..+++++++++++
T Consensus 443 ~~p~Ggfylw~~l~lp~~~~~~~~~~~~~~d~~~~~~Ll~~~GV~vvPGs~Fg~~~g~~~~Rit--~~~~~e~l~eal~R 520 (534)
T PLN02231 443 NKAEGAMYLFPRIHLPQKAIKAAEAAKTAPDAFYCKRLLNATGIVVVPGSGFGQVPGTWHFRCT--ILPQEDKIPAIVSR 520 (534)
T ss_pred cCCCeeeEEeccccCcHHHHHHHhhcCCCcHHHHHHHHHHhcCEEEeCCcccCCCCCCCeEEEE--eCCCHHHHHHHHHH
Confidence 5565555444 332 1 1223566666 56999998742 1 247775 56799999999999
Q ss_pred HHHHHHHHh
Q 013008 439 LCKTLPVLD 447 (451)
Q Consensus 439 l~~~l~~~~ 447 (451)
|.+++++.-
T Consensus 521 L~~~~~~~~ 529 (534)
T PLN02231 521 LTEFHKSFM 529 (534)
T ss_pred HHHHHHHHH
Confidence 999987754
No 203
>PRK09275 aspartate aminotransferase; Provisional
Probab=99.88 E-value=2.4e-21 Score=197.51 Aligned_cols=326 Identities=13% Similarity=0.051 Sum_probs=187.5
Q ss_pred EEeeccCcccccCCCC-CHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHhhc-c-C------CCeEEecCCHHHHHHH
Q 013008 100 YLDLSSGIAVNALGHG-DADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVAC-S-F------ADRVFFSNTGTEANEA 170 (451)
Q Consensus 100 ~iD~~~~~~~~~lG~~-~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~-~------~e~v~~~~sG~eA~~~ 170 (451)
.|++..|.. |.. ++.|.+ +.+++....+....+..+.++++++++.+. . . .++|++|+|+++|+..
T Consensus 102 ~i~l~~g~p----~~~~~~~v~e-~~~~~~~~~Y~~~~g~~~lreaia~~~~~~~~~~~~~~~~~~~I~vT~Ga~~al~~ 176 (527)
T PRK09275 102 AVSYVRDQL----GFDADEFVYE-LVDGIIGDNYPVPDRMLKHTEKIVKDYLRQEMCGGRPPKGEFDLFAVEGGTAAMCY 176 (527)
T ss_pred HHhhcCCCC----CCCCCHHHHH-HHHHHhcCCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHH
Confidence 455544433 344 444555 555553211211222233356666544332 1 1 2389999999999999
Q ss_pred HHHHHHH--HhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeE
Q 013008 171 AIKFARK--FQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTA 248 (451)
Q Consensus 171 al~~a~~--~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a 248 (451)
++.++.. .. +++|+|++.+|+|..+.............. ..+..++..+. .|.++|++++.+...+
T Consensus 177 ~~~aL~~~~ll--------~pGD~Vlv~~P~y~~Y~~~~~l~g~~~~~v--~v~~~~~~~f~--~d~~~l~~~~~~~tka 244 (527)
T PRK09275 177 IFDSLKENGLL--------KAGDKIALMTPIFTPYLEIPELPRYDLEVV--HINADEENEWQ--YPDSELEKLRDPSIKA 244 (527)
T ss_pred HHHHHhhhhcC--------CCCCEEEEeCCChHHHHHHHHHcCCCeEEE--EeecCcccCCC--CCHHHHHhhcCCCCCE
Confidence 9885321 11 279999999999988765433322111100 00111110011 2789999988654344
Q ss_pred EEEEccccCCCCccccCHHHHHHHHHHHHH--hCCEEEEeccccCCCccccccccccc-CCCcceeeeccccc-CCcccc
Q 013008 249 AVFVEPIQGEGGIYSATKEFLQFLRDACDD--AGALLVFDEVQCGLGRTGYLWAHEHY-GIFPDIMTLAKPLA-GGLPIG 324 (451)
Q Consensus 249 avi~ep~~~~~G~~~~~~~~l~~l~~l~~~--~g~llI~DEv~tg~gr~G~~~~~~~~-~~~pdi~t~sK~lg-~G~~iG 324 (451)
+++++|.|++ | .+.+++.+++|+++|++ +|++||+||+|..|.. ......... ....-+-+|||.++ .|||+|
T Consensus 245 i~l~nP~NPT-G-~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~-~~~s~~~~~~~~~I~v~SfSK~f~mtG~RlG 321 (527)
T PRK09275 245 LFLVNPSNPP-S-VAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVD-DFRSLFAVLPYNTILVYSFSKYFGATGWRLG 321 (527)
T ss_pred EEEeCCcCCc-C-CCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhcc-cccCHHHhCCCCEEEEeehhhhccCcHhHHh
Confidence 4555665444 4 46799999999999965 5999999999987742 111011111 11223448999998 599999
Q ss_pred cccccHH-----HHhhc--------------------------------cCCCccCCCCCcHHHHHH-H----HHHHHHh
Q 013008 325 AALVTEK-----VASAI--------------------------------NYGDHGSTFAGSPLVCNA-A----IAVLDKI 362 (451)
Q Consensus 325 ~v~~~~~-----i~~~~--------------------------------~~~~~~~t~~~~~~~~aa-a----~aal~~~ 362 (451)
|++++++ +++.+ +......|.+.+.+.|.+ + .++|+
T Consensus 322 ~i~~~~~~v~~~~i~~l~~~~~~~~~~ry~~~~~~p~~~~fidrlvad~~~v~~~~t~~~s~p~Q~a~al~~~~all~-- 399 (527)
T PRK09275 322 VIALHEDNVFDKLIAKLPEEKKKELDKRYSSLTTDPEKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALLD-- 399 (527)
T ss_pred hhhcCchhHHHHHHHhccHHHHHHHHhhhhhccCCcchhhhHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHh--
Confidence 9999875 33322 112234566667667665 3 23343
Q ss_pred cChHHHHH-----------HHhCCCC-ccee-cccceeEEEEecC------------------ChHHHHHHHHH-CCcee
Q 013008 363 SNPAFLAS-----------KLARNPH-VKDV-RGLGLIIGIEFDV------------------SATPVVDACRD-SGLLV 410 (451)
Q Consensus 363 ~~~~~~~~-----------~~~~~~~-~~~v-~g~G~~~~~~~~~------------------~~~~~~~~l~~-~Gv~~ 410 (451)
..+.+.+. +.+.+.. +... ...++++++++.. +..+|+.+|++ .||.+
T Consensus 400 ~~~~~~~~~~~~~~~Rr~~l~~~Lg~~~~~~~p~g~fY~~~di~~~~~~~~g~~f~~~l~~~~~~~~f~~~Ll~e~gV~v 479 (527)
T PRK09275 400 EEDAYKKAMKDIIRRRYKALYEGLGLPEPEDPNNAAYYTLIDLEEWAEKNYGKEFADYLKKNYSPVDLLFRLAEETGVVL 479 (527)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHcCCCCcCCCCCeeEEEEEEhHHhhhhccCchhhhhhhccCCHHHHHHHHHhcCCEEE
Confidence 22233322 2233321 1112 2335566666521 34567777775 59999
Q ss_pred eecCC----CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHhh
Q 013008 411 LTAGK----GNVVRLVPPLIISEQELDQAVEILCKTLPVLDS 448 (451)
Q Consensus 411 ~~~~~----~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~~~ 448 (451)
.|+.. ...+|++.. ..+++++.++.++|.+.+++..+
T Consensus 480 ~PG~~Fg~~~~~vRis~a-~~~~~~~~~~~~rl~~~l~~y~~ 520 (527)
T PRK09275 480 LPGGGFGGPEWSVRVSLA-NLNEEDYAKIGKAIRKLLDEYYE 520 (527)
T ss_pred eCchhhCCCCCeEEEEEe-cCCHHHHHHHHHHHHHHHHHHHH
Confidence 88742 246888542 25889999999999999987653
No 204
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=99.88 E-value=7.8e-21 Score=194.20 Aligned_cols=285 Identities=19% Similarity=0.122 Sum_probs=179.3
Q ss_pred HHHHHHHHHhhcc------CCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCC
Q 013008 141 PQIELAKRLVACS------FADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKE 214 (451)
Q Consensus 141 ~~~~l~~~l~~~~------~~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~ 214 (451)
.+.++++++.+.+ ..++|++|+|+++++..++.+.. +++|.|++.+|+|.++........+..
T Consensus 91 LR~aiA~~l~~~~~~~~~v~~~~Iiit~Ga~~al~~l~~~l~-----------~pGd~Vlv~~P~Y~~~~~~~~~~~g~~ 159 (468)
T PLN02450 91 FKNALAEFMSEIRGNKVTFDPNKLVLTAGATSANETLMFCLA-----------EPGDAFLLPTPYYPGFDRDLKWRTGVE 159 (468)
T ss_pred HHHHHHHHHHHhhCCCCCcChHHeEEccChHHHHHHHHHHhC-----------CCCCEEEECCCCCCchHHHHhhcCCcE
Confidence 3666777766542 36789999999999999988665 278999999999988754433222221
Q ss_pred CcCCCCcCCCCCeeEeeCCCHHHHHHhcCC-----CCeEE-EEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEecc
Q 013008 215 HYRSPFEPVMPGVNFVEYGNIEATRKLIQP-----GKTAA-VFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEV 288 (451)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~d~~~le~~l~~-----~~~aa-vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv 288 (451)
... .+......+. .|++.+++.++. .++++ ++++|.| ++| .+++.+.+++|.++|++||++||+||+
T Consensus 160 ~v~---v~~~~~~~~~--~~~~~le~~~~~~~~~~~~~k~v~l~nP~N-PTG-~~~s~e~l~~ll~~a~~~~~~iI~DE~ 232 (468)
T PLN02450 160 IVP---IHCSSSNGFQ--ITESALEEAYQQAQKLNLKVKGVLITNPSN-PLG-TTTTRTELNLLVDFITAKNIHLISDEI 232 (468)
T ss_pred EEE---EecCCccCCc--CCHHHHHHHHHHHHhcCCCeeEEEEecCCC-CCC-cccCHHHHHHHHHHHHHCCcEEEEEcc
Confidence 111 1111000000 167888877742 24554 4444544 444 467999999999999999999999999
Q ss_pred ccCCCcccccc-c-cccc-----------CCCcceeeeccccc-CCcccccccccH-HHHhhccCCCccCCCCCcHHHHH
Q 013008 289 QCGLGRTGYLW-A-HEHY-----------GIFPDIMTLAKPLA-GGLPIGAALVTE-KVASAINYGDHGSTFAGSPLVCN 353 (451)
Q Consensus 289 ~tg~gr~G~~~-~-~~~~-----------~~~pdi~t~sK~lg-~G~~iG~v~~~~-~i~~~~~~~~~~~t~~~~~~~~a 353 (451)
|.++-..+..+ . .... +...-+-+|||.++ +|+|+||+++++ .+.+.+.... .....+.+++.
T Consensus 233 Y~~~~f~~~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~li~~~~~l~~~~~~~~--~~~~~s~~~Q~ 310 (468)
T PLN02450 233 YSGTVFDSPGFVSVMEVLKDRKLENTDVSNRVHIVYSLSKDLGLPGFRVGAIYSNDEMVVSAATKMS--SFGLVSSQTQY 310 (468)
T ss_pred ccccccCCCCcccHHHHhhhcccccCCCCCcEEEEEeccccCCCCCccEEEEEECCHHHHHHHHHHh--hcCCCCHHHHH
Confidence 98764444221 1 1111 11112448999998 799999999974 4555554221 11235778888
Q ss_pred HHHHHHHHhcC-hHHHHH--------------HHhCCCCcceecc-cceeEEEEecC--------ChHHHHHHHHH-CCc
Q 013008 354 AAIAVLDKISN-PAFLAS--------------KLARNPHVKDVRG-LGLIIGIEFDV--------SATPVVDACRD-SGL 408 (451)
Q Consensus 354 aa~aal~~~~~-~~~~~~--------------~~~~~~~~~~v~g-~G~~~~~~~~~--------~~~~~~~~l~~-~Gv 408 (451)
++.++|+.-.- ..++++ .++.+. +....+ .|+++|+.+.. ...++.+.|++ +||
T Consensus 311 a~~~~L~~~~~~~~~l~~~~~~l~~rr~~l~~~L~~~g-i~~~~~~~g~flwi~l~~~~~~~~~~~~~~l~~~ll~~~gV 389 (468)
T PLN02450 311 LLSALLSDKKFTKNYLEENQKRLKQRQKKLVSGLEAAG-IKCLKSNAGLFCWVDMRHLLKSNTFEAEMELWKKIVYEVKL 389 (468)
T ss_pred HHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHcC-CcccCCCceEEEEEEchHhcCcCCchHHHHHHHHHHHhCCE
Confidence 88877752110 012221 223332 222333 47788888731 12346677764 799
Q ss_pred eeeecCC-----CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHh
Q 013008 409 LVLTAGK-----GNVVRLVPPLIISEQELDQAVEILCKTLPVLD 447 (451)
Q Consensus 409 ~~~~~~~-----~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~~ 447 (451)
.+.|+.. .+++|++.+. .+++++++++++|.+++.+..
T Consensus 390 ~v~PG~~f~~~~~g~~Rl~f~~-~~~~~l~~~l~ri~~~l~~~~ 432 (468)
T PLN02450 390 NISPGSSCHCTEPGWFRVCFAN-MSEETLDLAMKRLKSFVESDS 432 (468)
T ss_pred EEeCccccCCCCCCEEEEEecC-CCHHHHHHHHHHHHHHHHhcc
Confidence 9998742 3578885443 578999999999999987654
No 205
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.88 E-value=6.1e-21 Score=187.78 Aligned_cols=306 Identities=17% Similarity=0.131 Sum_probs=191.7
Q ss_pred eeccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHhhccCCCeEEecCCHHHHHHHHHHHHHHHhhh
Q 013008 102 DLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRH 181 (451)
Q Consensus 102 D~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~e~v~~~~sG~eA~~~al~~a~~~~~~ 181 (451)
||+|..+ +| .+|.+.+++.+.+... ..+++.....+++++++++++.+.++++++|++|+..+++.+.
T Consensus 1 ~~~~~~~---~~-~~~~v~~a~~~~~~~~---~~~~~~~~~~~l~~~~a~~~g~~~~~~~~~gt~a~~~~~~~l~----- 68 (338)
T cd06502 1 DFRSDTV---TG-PTPEMLEAMAAANVGD---DVYGEDPTTAKLEARAAELFGKEAALFVPSGTAANQLALAAHT----- 68 (338)
T ss_pred CcccccC---CC-CCHHHHHHHHhcccCC---cccCCCHHHHHHHHHHHHHhCCCeEEEecCchHHHHHHHHHhc-----
Confidence 6777555 77 8899999998865321 1223455688999999999987789999999999999998654
Q ss_pred cCCCCCCCCceEEEEcCCccCChhh--hhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCC------CCeEEEEEc
Q 013008 182 SNPDSKEPATEFVSFTNSFHGRTMG--ALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQP------GKTAAVFVE 253 (451)
Q Consensus 182 ~~~~~~~~~~~ii~~~~~yhg~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~------~~~aavi~e 253 (451)
.+++.|++.+++|...... ...+.+..... .+... ...|+++|++++.+ .++++|+++
T Consensus 69 ------~~gd~v~~~~~~~~~~~~~~~~~~~~g~~~~~---v~~~~-----~~~d~~~l~~~i~~~~~~~~~~~~~v~l~ 134 (338)
T cd06502 69 ------QPGGSVICHETAHIYTDEAGAPEFLSGVKLLP---VPGEN-----GKLTPEDLEAAIRPRDDIHFPPPSLVSLE 134 (338)
T ss_pred ------CCCCeEEEecCcceeeecCCcHHHHcCceEEe---ecCCC-----CcCCHHHHHHHhhccCCCcCCcceEEEEE
Confidence 1578888877765432211 11112211111 01110 01388999999863 246677776
Q ss_pred cccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCC--CcccccccccccCCCccee--eecccccCCccccc-ccc
Q 013008 254 PIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGL--GRTGYLWAHEHYGIFPDIM--TLAKPLAGGLPIGA-ALV 328 (451)
Q Consensus 254 p~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~--gr~G~~~~~~~~~~~pdi~--t~sK~lg~G~~iG~-v~~ 328 (451)
.++++|| + .+.+.+++|+++|++||+++|+||+|..+ +..|. ........+|++ +++|.++. +.|+ +++
T Consensus 135 ~p~n~g~-~-~~~~~l~~i~~~~~~~~~~livDea~~~~~~~~~~~--~~~~~~~~~d~~~~s~sK~~~~--~~g~~~~~ 208 (338)
T cd06502 135 NTTEGGT-V-YPLDELKAISALAKENGLPLHLDGARLANAAAALGV--ALKTYKSGVDSVSFCLSKGGGA--PVGAVVVG 208 (338)
T ss_pred eecCCcc-c-cCHHHHHHHHHHHHHcCCeEeechHHHHHHHHhcCC--CHHHHHhcCCEEEEeccccCCC--ccceEEEC
Confidence 6555544 3 38888999999999999999999997422 11121 111222245554 67898863 3355 457
Q ss_pred cHHHHhhccCC--CccCCCCCcHHHHHHHHHHHHHhcChHHHHH----------HHhCCCCcceecccceeEEEEecCC-
Q 013008 329 TEKVASAINYG--DHGSTFAGSPLVCNAAIAVLDKISNPAFLAS----------KLARNPHVKDVRGLGLIIGIEFDVS- 395 (451)
Q Consensus 329 ~~~i~~~~~~~--~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~----------~~~~~~~~~~v~g~G~~~~~~~~~~- 395 (451)
++++++.+... ..+++++.+++.++++.++|+.-......++ .++.++. ......+.+..+.+...
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~-~~~~~~~~~~~v~~~~~~ 287 (338)
T cd06502 209 NRDFIARARRRRKQAGGGMRQSGFLAAAGLAALENDLWLRRLRHDHEMARRLAEALEELGG-LESEVQTNIVLLDPVEAN 287 (338)
T ss_pred CHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCC-CcccccCCeEEEecCCcc
Confidence 88888877543 2234566677888888877763101111111 2222332 11223444555554311
Q ss_pred --hHHHHHHHH---HCCceeeecCCCCEEEEeCCCCCCHHHHHHHHHHHHH
Q 013008 396 --ATPVVDACR---DSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCK 441 (451)
Q Consensus 396 --~~~~~~~l~---~~Gv~~~~~~~~~~iri~~~~~~t~e~i~~~l~~l~~ 441 (451)
..++.+.+. ++|+++.+.+. +.+|++|++.++++|++++++++++
T Consensus 288 ~~~~~l~~~l~~~~~~gi~~~~~~~-~~lRi~~~~~~~~~~i~~~~~~l~~ 337 (338)
T cd06502 288 AVFVELSKEAIERRGEGVLFYAWGE-GGVRFVTHWDTTEEDVDELLSALKA 337 (338)
T ss_pred HHHHHHHHHHHHhhhCCEEEEecCC-CeEEEEeecCCCHHHHHHHHHHHhc
Confidence 223344443 67999988765 7899999999999999999999865
No 206
>PTZ00376 aspartate aminotransferase; Provisional
Probab=99.88 E-value=1.2e-20 Score=190.26 Aligned_cols=280 Identities=12% Similarity=0.086 Sum_probs=173.7
Q ss_pred HHHHHHHHHhhcc----CCCeEE--ecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCC
Q 013008 141 PQIELAKRLVACS----FADRVF--FSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKE 214 (451)
Q Consensus 141 ~~~~l~~~l~~~~----~~e~v~--~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~ 214 (451)
.++++++++.+.. ..++|+ .|++|++|+..++.+++.+.. ++|.|++.+|+|+++.......+...
T Consensus 77 lR~aia~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~~~~--------~Gd~Vlv~~P~y~~~~~~~~~~G~~~ 148 (404)
T PTZ00376 77 FIEAAQKLLFGEASYALAEKRIATVQALSGTGALRLGFEFLKRFLP--------AGTTVYVSNPTWPNHVNIFKSAGLNV 148 (404)
T ss_pred HHHHHHHHhcCCCccccccCeEEEeeccCcchHHHHHHHHHHHhcC--------CCCEEEEcCCCchhHHHHHHHcCCce
Confidence 3555555554332 256788 488999999999886655543 68999999999999876544433222
Q ss_pred CcCCCCcCCCCCeeEeeCCCHHHHHHhcCC--CCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCC
Q 013008 215 HYRSPFEPVMPGVNFVEYGNIEATRKLIQP--GKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGL 292 (451)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~d~~~le~~l~~--~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~ 292 (451)
. . .++.++..+ --|++.+++.++. .+..++++...++++| .+++.+.+++|.++|++||+++|+||+|.+|
T Consensus 149 ~-~---v~l~~~~~~--~~d~~~l~~~~~~~~~~~~~~~~~~p~NPTG-~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~ 221 (404)
T PTZ00376 149 K-E---YRYYDPKTK--GLDFDGMLEDLRTAPNGSVVLLHACAHNPTG-VDPTEEQWKEIADVMKRKNLIPFFDMAYQGF 221 (404)
T ss_pred e-e---ccccCcccC--CcCHHHHHHHHHhCCCCCEEEEeCCCCCCCC-CCCCHHHHHHHHHHHHhCCcEEEEehhhcCc
Confidence 1 1 121110000 0178899888852 2334454444444445 4679999999999999999999999999887
Q ss_pred Ccccc---c---ccccc-cCCCcceeeeccccc-CCcccccc---cccHHHHhhccCC---CccCCC-CCcHHHHHHHHH
Q 013008 293 GRTGY---L---WAHEH-YGIFPDIMTLAKPLA-GGLPIGAA---LVTEKVASAINYG---DHGSTF-AGSPLVCNAAIA 357 (451)
Q Consensus 293 gr~G~---~---~~~~~-~~~~pdi~t~sK~lg-~G~~iG~v---~~~~~i~~~~~~~---~~~~t~-~~~~~~~aaa~a 357 (451)
...+. . ..... .....-+.+|||.++ .|+|+||+ ++++++++.+... ....++ +.+++++.++.+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRvG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~ 301 (404)
T PTZ00376 222 ASGDLDKDAYAIRLFAERGVEFLVAQSFSKNMGLYGERIGALHIVCANKEEAANVLSQLKLIIRPMYSSPPIHGARIADR 301 (404)
T ss_pred cCCCHHHHHHHHHHHHhcCCcEEEEEeCCCcccccccccceEEEEeCCHHHHHHHHHHHHHHHhhhcCCCchHHHHHHHH
Confidence 54331 1 11111 111233458999999 79999998 5787755543211 112333 346788888887
Q ss_pred HHHHhc-ChHH---H--------HH------HHhCCC---Cccee-cccceeEEEEecCChHHHHHHHHHC-CceeeecC
Q 013008 358 VLDKIS-NPAF---L--------AS------KLARNP---HVKDV-RGLGLIIGIEFDVSATPVVDACRDS-GLLVLTAG 414 (451)
Q Consensus 358 al~~~~-~~~~---~--------~~------~~~~~~---~~~~v-~g~G~~~~~~~~~~~~~~~~~l~~~-Gv~~~~~~ 414 (451)
+|+.-. .+.+ . ++ .++.+. ..... +..|+++|+.+ ..+++++|+++ ||++.|++
T Consensus 302 ~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~p~gg~f~~~~~---~~~~~~~L~~~~~v~v~p~~ 378 (404)
T PTZ00376 302 ILSDPELRAEWLSELKEMSGRIQNMRQLLYDELKALGSPGDWEHIINQIGMFSFTGL---TKEQVERLIEKYHIYLLDNG 378 (404)
T ss_pred HhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccccCceEEEecCC---CHHHHHHHHHhCCEeecCCC
Confidence 775210 0111 1 11 122221 11122 23466666655 35788889877 99998862
Q ss_pred CCCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q 013008 415 KGNVVRLVPPLIISEQELDQAVEILCKTLP 444 (451)
Q Consensus 415 ~~~~iri~~~~~~t~e~i~~~l~~l~~~l~ 444 (451)
|++.+. .+.+++++++++|++++.
T Consensus 379 -----Ris~~~-~~~~~~~~~~~~l~~~~~ 402 (404)
T PTZ00376 379 -----RISVAG-LTSKNVDYVAEAIHDVVR 402 (404)
T ss_pred -----eEEEec-cCHHhHHHHHHHHHHHHh
Confidence 776543 799999999999998875
No 207
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=99.88 E-value=1.2e-20 Score=191.48 Aligned_cols=281 Identities=18% Similarity=0.176 Sum_probs=179.3
Q ss_pred HHHHHHHHHhhccC------CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCC
Q 013008 141 PQIELAKRLVACSF------ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKE 214 (451)
Q Consensus 141 ~~~~l~~~l~~~~~------~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~ 214 (451)
.+.++++.+.+.++ +++|++|+|+++|++.++.++. +++|.|++.+|.|.++........+..
T Consensus 100 LR~aiA~~l~~~~~~~~~v~p~~Ivit~G~t~al~~l~~~l~-----------~pGD~Vlv~~P~Y~~f~~~~~~~~g~~ 168 (447)
T PLN02607 100 FRQAMASFMEQIRGGKARFDPDRIVLTAGATAANELLTFILA-----------DPGDALLVPTPYYPGFDRDLRWRTGVK 168 (447)
T ss_pred HHHHHHHHHHHhcCCCCCcCHHHeEEcCChHHHHHHHHHHhC-----------CCCCEEEEcCCCCcchHHHHHhcCCcE
Confidence 36667777765432 5789999999999999888654 278999999999998864432222221
Q ss_pred CcCCCCcCCCCCeeEeeCCCHHHHHHhcCC-----CCeEEEEE-ccccCCCCccccCHHHHHHHHHHHHHhCCEEEEecc
Q 013008 215 HYRSPFEPVMPGVNFVEYGNIEATRKLIQP-----GKTAAVFV-EPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEV 288 (451)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~d~~~le~~l~~-----~~~aavi~-ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv 288 (451)
... .+......+ .-|+++++++++. .+++++++ +|.| +.| .+++++.+++|.++|++|++.||+||+
T Consensus 169 vv~---v~~~~~~~f--~~~~~~le~a~~~a~~~~~~vk~lll~nP~N-PtG-~~~s~e~l~~l~~~~~~~~i~lI~DEi 241 (447)
T PLN02607 169 IVP---IHCDSSNNF--QVTPQALEAAYQEAEAANIRVRGVLITNPSN-PLG-ATVQRSVLEDILDFVVRKNIHLVSDEI 241 (447)
T ss_pred EEE---EeCCCCCCC--cCCHHHHHHHHHHHHHhCCCeeEEEEeCCCC-CcC-cccCHHHHHHHHHHHHHCCCEEEEecc
Confidence 111 011111000 0278888888752 35555554 4544 444 468999999999999999999999999
Q ss_pred ccCCCccccccc-c-c---ccCC-C-cc----eeeeccccc-CCcccccccc-cHHHHhhccCCCccCCC-CCcHHHHHH
Q 013008 289 QCGLGRTGYLWA-H-E---HYGI-F-PD----IMTLAKPLA-GGLPIGAALV-TEKVASAINYGDHGSTF-AGSPLVCNA 354 (451)
Q Consensus 289 ~tg~gr~G~~~~-~-~---~~~~-~-pd----i~t~sK~lg-~G~~iG~v~~-~~~i~~~~~~~~~~~t~-~~~~~~~aa 354 (451)
|.++-..+..+. . + ..+. . ++ +-+|||.+| +|+|+|++++ ++++++.+... ..+ ..+.+++.+
T Consensus 242 Ya~~~f~~~~f~S~~s~~~~~~~~~~~~~v~vi~s~SK~fg~~GlRvG~ivs~n~~l~~~~~~~---~~~~~~s~~~q~~ 318 (447)
T PLN02607 242 YSGSVFSASEFVSVAEIVEARGYKGVAERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRM---SSFTLVSSQTQHL 318 (447)
T ss_pred ccccccCCCCcccHHHHHhhcCCCCCcCcEEEEEcchhcCCCCcceEEEEEEcCHHHHHHHHHH---hhcCCCCHHHHHH
Confidence 987433222111 1 1 1110 1 22 237899998 7999999998 67777766432 222 346667777
Q ss_pred HHHHHHHhcChHHH----HH--------------HHhCCCCcceecc-cceeEEEEecC--------ChHHHHHHHHH-C
Q 013008 355 AIAVLDKISNPAFL----AS--------------KLARNPHVKDVRG-LGLIIGIEFDV--------SATPVVDACRD-S 406 (451)
Q Consensus 355 a~aal~~~~~~~~~----~~--------------~~~~~~~~~~v~g-~G~~~~~~~~~--------~~~~~~~~l~~-~ 406 (451)
+.+.|+ ++++. +. .++.+ .+..+++ .|+++|+++.. ...++.+++++ .
T Consensus 319 ~~~~L~---d~~~~~~~l~~~r~~l~~~~~~~~~~L~~~-gi~~~~~~ag~fvw~~L~~~~~~~~~~~e~~l~~~ll~~~ 394 (447)
T PLN02607 319 LASMLS---DEEFTENYIRTNRERLRKRYEMIVQGLRRA-GIECLKGNAGLFCWMNLSPLLETPTREGELALWDSILREV 394 (447)
T ss_pred HHHHhC---CchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCcccCCeeEEEEEEchHhhcCCCchhHHHHHHHHHHhC
Confidence 666654 33222 11 22222 2222333 48899998831 12467777775 6
Q ss_pred CceeeecCC-----CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHh
Q 013008 407 GLLVLTAGK-----GNVVRLVPPLIISEQELDQAVEILCKTLPVLD 447 (451)
Q Consensus 407 Gv~~~~~~~-----~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~~ 447 (451)
||.+.|+.. .+++|++.+. .++++++++++||.+++++-+
T Consensus 395 gV~v~pG~~f~~~~~g~fRi~fa~-~~~~~l~~gl~Ri~~~l~~~~ 439 (447)
T PLN02607 395 KLNISPGSSCHCSEPGWFRVCFAN-MSEDTLEVALKRIHRFMDRRK 439 (447)
T ss_pred CEEEcCccccCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHHH
Confidence 999998631 3678885442 479999999999999997654
No 208
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.88 E-value=2.7e-20 Score=185.65 Aligned_cols=300 Identities=16% Similarity=0.108 Sum_probs=191.4
Q ss_pred CCCHHHHHHHHHHHhhcccccCCCCCH--HHHHHHHHHhhccCC--CeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCC
Q 013008 114 HGDADWIKAVVDQANVLTHVSNMYYSI--PQIELAKRLVACSFA--DRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEP 189 (451)
Q Consensus 114 ~~~p~v~~a~~~~~~~~~~~~~~~~~~--~~~~l~~~l~~~~~~--e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~ 189 (451)
+.+|.+.+++.+++......+..++.. ...+++++++++++. +.+++++||++|+..+++.++.... .+
T Consensus 31 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~~~~~ggt~a~~~a~~~~~~~~~-------~~ 103 (371)
T PRK13520 31 EPHPIARKAHEMFLETNLGDPGLFPGTAKLEEEAVEMLGELLHLPDAYGYITSGGTEANIQAVRAARNLAK-------AE 103 (371)
T ss_pred CchHHHHHHHHHHHhcCCCCcccCccHHHHHHHHHHHHHHHhCCCCCCeEEecCcHHHHHHHHHHHHhhcc-------CC
Confidence 688999999999887532222222222 247888999998883 4688999999999999998764311 13
Q ss_pred CceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeC-----CCHHHHHHhcCCCCeEEEEEccccCCCCcccc
Q 013008 190 ATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEY-----GNIEATRKLIQPGKTAAVFVEPIQGEGGIYSA 264 (451)
Q Consensus 190 ~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~le~~l~~~~~aavi~ep~~~~~G~~~~ 264 (451)
+++||+.++.+..+...+ ...|. .+..+|. .|+++|++.+.++....+++.+ ++++|.+.+
T Consensus 104 ~~~vl~~~~~h~s~~~~~-~~~g~------------~~~~v~~~~~~~~d~~~l~~~i~~~~~~vi~~~~-~~~tG~~~~ 169 (371)
T PRK13520 104 KPNIVVPESAHFSFDKAA-DMLGV------------ELRRAPLDDDYRVDVKAVEDLIDDNTIGIVGIAG-TTELGQVDP 169 (371)
T ss_pred CceEEecCcchHHHHHHH-HHcCc------------eEEEecCCCCCcCCHHHHHHHHhhCCEEEEEEcC-CcCCcccCC
Confidence 678888887765433222 11111 1122221 2899999999754334444444 456677776
Q ss_pred CHHHHHHHHHHHHHhCCEEEEeccccCCCc----ccccccccccCCCcceeeec--ccccCCcccccccc-cHHHHhhcc
Q 013008 265 TKEFLQFLRDACDDAGALLVFDEVQCGLGR----TGYLWAHEHYGIFPDIMTLA--KPLAGGLPIGAALV-TEKVASAIN 337 (451)
Q Consensus 265 ~~~~l~~l~~l~~~~g~llI~DEv~tg~gr----~G~~~~~~~~~~~pdi~t~s--K~lg~G~~iG~v~~-~~~i~~~~~ 337 (451)
+++|.++|++||+++|+||+|+++.. .+..+.... ...|.+++| |...+|+|+|+++. ++++++.+.
T Consensus 170 ----l~~I~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~--~~vd~~~~s~~K~~~a~~~~G~~~~~~~~~~~~l~ 243 (371)
T PRK13520 170 ----IPELSKIALENGIFLHVDAAFGGFVIPFLDDPPNFDFSL--PGVDSITIDPHKMGLAPIPAGGILFRDESYLDALA 243 (371)
T ss_pred ----HHHHHHHHHHcCCCEEEEecchhHHHHhhcCCCCccccC--CCCceEEECCccccCccCCceEEEEcCHHHHHhhc
Confidence 99999999999999999999986521 111111111 134655543 64444688987775 566776653
Q ss_pred CCC--c--------cCCCCCcHHHHHHHHHHHHHhcChHH---HHH-------H---HhCCCCcc-eecccceeEEEEec
Q 013008 338 YGD--H--------GSTFAGSPLVCNAAIAVLDKISNPAF---LAS-------K---LARNPHVK-DVRGLGLIIGIEFD 393 (451)
Q Consensus 338 ~~~--~--------~~t~~~~~~~~aaa~aal~~~~~~~~---~~~-------~---~~~~~~~~-~v~g~G~~~~~~~~ 393 (451)
... . .+|. ++..++++.++|+.+..+++ .++ + ++... +. .+.....++.+.+.
T Consensus 244 ~~~~~~~~~~~~~~~gt~--~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~v~~~~~ 320 (371)
T PRK13520 244 VDTPYLTSKKQATLTGTR--SGAGVAATYAVMKYLGREGYRKVVERCMENTRWLAEELKERG-FEPVIEPVLNIVAFDDP 320 (371)
T ss_pred ccCccccCCCCcceEeec--cChHHHHHHHHHhhhcHhHHHHHHHHHHHHHHHHHHHHHhCC-CEEecCCCceEEEEecC
Confidence 210 0 1122 34457778888887654443 222 1 12222 22 22333445556554
Q ss_pred CChHHHHHHHHHCCceeeecCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q 013008 394 VSATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTLP 444 (451)
Q Consensus 394 ~~~~~~~~~l~~~Gv~~~~~~~~~~iri~~~~~~t~e~i~~~l~~l~~~l~ 444 (451)
+..++.+.|.++||.+.++..+..+|++++..+|++|++++++.|+++++
T Consensus 321 -~~~~v~~~L~~~gi~v~~~~~~~~iRis~~~~~t~edi~~~~~~l~~~~~ 370 (371)
T PRK13520 321 -NPDEVREKLRERGWRVSVTRCPEALRIVCMPHVTREHIENFLEDLKEVKK 370 (371)
T ss_pred -CHHHHHHHHHHCCceeccCCCCCEEEEEEECCCCHHHHHHHHHHHHHHhh
Confidence 57789999999999998765457899988878899999999999998765
No 209
>PRK10534 L-threonine aldolase; Provisional
Probab=99.88 E-value=5.5e-21 Score=187.80 Aligned_cols=307 Identities=17% Similarity=0.160 Sum_probs=195.7
Q ss_pred EEeeccCcccccCCCCCHHHHHHHHHHHhhcccccCCC-CCHHHHHHHHHHhhccCCCeEEecCCHHHHHHHHHHHHHHH
Q 013008 100 YLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMY-YSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKF 178 (451)
Q Consensus 100 ~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~-~~~~~~~l~~~l~~~~~~e~v~~~~sG~eA~~~al~~a~~~ 178 (451)
+|||.++.. -| .+|.+.+|+.+..... ..| +.+...+|++.|+++++.+.+++++||++++..++.+..
T Consensus 1 ~~~~~~~~~---~~-p~~~~~~a~~~~~~~~----~~Y~~~~~~~~L~~~la~~~g~~~~~v~~~g~~a~~~~l~~~~-- 70 (333)
T PRK10534 1 MIDLRSDTV---TR-PSRAMLEAMMAAPVGD----DVYGDDPTVNALQDYAAELSGKEAALFLPTGTQANLVALLSHC-- 70 (333)
T ss_pred CcccccccC---CC-CCHHHHHHHHhccCCC----cccCCCHHHHHHHHHHHHHhCCCeEEEeCchHHHHHHHHHHhc--
Confidence 478888766 34 7899999987744321 223 566789999999999998888899999999988887553
Q ss_pred hhhcCCCCCCCCceEEEEcCCccCChh-h-hhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCC-----CeEEEE
Q 013008 179 QRHSNPDSKEPATEFVSFTNSFHGRTM-G-ALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPG-----KTAAVF 251 (451)
Q Consensus 179 ~~~~~~~~~~~~~~ii~~~~~yhg~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~-----~~aavi 251 (451)
.++++|++..++|.-... . .....+..... .+...+. ..|+++|++++.++ ++++|+
T Consensus 71 ---------~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~----~~d~~~l~~~i~~~~~~~~~~~lv~ 134 (333)
T PRK10534 71 ---------ERGEEYIVGQAAHNYLYEAGGAAVLGSIQPQP---IDAAADG----TLPLDKVAAKIKPDDIHFARTRLLS 134 (333)
T ss_pred ---------CCCCeeEEechhhhhHhcCCchHHhcCceEEe---ecCCCCC----CCCHHHHHHhhcccCcCcccceEEE
Confidence 157888887766632111 1 11111000000 0111111 12789999988642 355666
Q ss_pred EccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcc---cccccccccCCCcc--eeeecccccCCcccc-c
Q 013008 252 VEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRT---GYLWAHEHYGIFPD--IMTLAKPLAGGLPIG-A 325 (451)
Q Consensus 252 ~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~---G~~~~~~~~~~~pd--i~t~sK~lg~G~~iG-~ 325 (451)
++.+ + +|. +.+.+.+++|.++|++||++||+||+|. |+.. +... ......+| +++|||+++ +++| +
T Consensus 135 l~np-~-~G~-v~~~~~l~~i~~~~~~~~~~lvvDEA~~-~~~~~~~~~~~--~~~~~~~~~~~~s~SK~~~--~~~G~~ 206 (333)
T PRK10534 135 LENT-H-NGK-VLPREYLKQAWEFTRERNLALHVDGARI-FNAVVAYGCEL--KEITQYCDSFTICLSKGLG--TPVGSL 206 (333)
T ss_pred EecC-C-CCe-ecCHHHHHHHHHHHHHcCCeEEeeHHHH-HHHHHHcCCCH--HHHHhcCCEEEEEeEcCCC--Ccccce
Confidence 6532 2 355 5688889999999999999999999976 4221 2111 11101123 458999875 3578 5
Q ss_pred ccccHHHHhhccCCCc--cCCCCCcHHHHHHHHHHHHHhc-C-hHHHH---H---HHhCCCCcceecccceeEEEEec-C
Q 013008 326 ALVTEKVASAINYGDH--GSTFAGSPLVCNAAIAVLDKIS-N-PAFLA---S---KLARNPHVKDVRGLGLIIGIEFD-V 394 (451)
Q Consensus 326 v~~~~~i~~~~~~~~~--~~t~~~~~~~~aaa~aal~~~~-~-~~~~~---~---~~~~~~~~~~v~g~G~~~~~~~~-~ 394 (451)
+++++++++.++.... ...++.+.+.++++.++|+... . ....+ . .+++++ +...++.+.++++.++ .
T Consensus 207 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~r~~l~~~L~~~g-~~~~~~~~nfv~~~~~~~ 285 (333)
T PRK10534 207 LVGNRDYIKRARRWRKMTGGGMRQAGILAAAGLYALKHNVARLQEDHDNAAWLAEQLREAG-ADVMRQDTNMLFVRVGEE 285 (333)
T ss_pred EEcCHHHHHHHHHHHHHhCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhCC-CccCCCCceEEEEECCch
Confidence 7789999888764322 1123334566777777776311 0 11111 1 223332 3334456888888774 2
Q ss_pred ChHHHHHHHHHCCceeeecCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q 013008 395 SATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTLP 444 (451)
Q Consensus 395 ~~~~~~~~l~~~Gv~~~~~~~~~~iri~~~~~~t~e~i~~~l~~l~~~l~ 444 (451)
....+.+.|.++||++.++ ..+|+..++.+|+|++++++++|++.+.
T Consensus 286 ~~~~~~~~l~~~gi~v~~~---~~~rl~~~~r~t~e~~~~~~~~l~~~~~ 332 (333)
T PRK10534 286 QAAALGEYMRERNVLINAS---PIVRLVTHLDVSREQLAEVVAHWRAFLA 332 (333)
T ss_pred hHHHHHHHHHHcCeeecCC---ceEEEEEEeCCCHHHHHHHHHHHHHHhc
Confidence 4567888899999999875 3478877777899999999999987663
No 210
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=99.87 E-value=2.6e-20 Score=191.14 Aligned_cols=281 Identities=16% Similarity=0.120 Sum_probs=179.4
Q ss_pred HHHHHHHHHhhcc------CCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCC
Q 013008 141 PQIELAKRLVACS------FADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKE 214 (451)
Q Consensus 141 ~~~~l~~~l~~~~------~~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~ 214 (451)
.+.++++++.+.. .+++|++|+|+++|++.+++++. +++|.|++.+|+|.++........|..
T Consensus 99 LR~aiA~~l~~~~g~~v~v~pe~Ivit~Ga~~al~~l~~~l~-----------~pGD~Vlv~~P~Y~~~~~~~~~~~G~~ 167 (496)
T PLN02376 99 FRQAIAHFMGKARGGKVTFDPERVVMSGGATGANETIMFCLA-----------DPGDVFLIPSPYYAAFDRDLRWRTGVE 167 (496)
T ss_pred HHHHHHHHHHHHhCCCCcCChhhEEEccchHHHHHHHHHHhC-----------CCCCEEEECCCCccchHHHHHhhCCCE
Confidence 3666777666542 36899999999999999999765 278999999999999865432222222
Q ss_pred CcCCCCcCCCC--CeeEeeCCCHHHHHHhcC-----CCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEec
Q 013008 215 HYRSPFEPVMP--GVNFVEYGNIEATRKLIQ-----PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDE 287 (451)
Q Consensus 215 ~~~~~~~~~~~--~~~~~~~~d~~~le~~l~-----~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DE 287 (451)
... .+... +.. -|+++++++++ ..++++|++...++++| .+++.+.+++|.++|++||++||+||
T Consensus 168 vv~---v~~~~~~~~~----~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG-~~~s~e~l~~L~~~a~~~~i~lI~DE 239 (496)
T PLN02376 168 IIP---VPCSSSDNFK----LTVDAADWAYKKAQESNKKVKGLILTNPSNPLG-TMLDKDTLTNLVRFVTRKNIHLVVDE 239 (496)
T ss_pred EEE---EeCCCCccCc----CCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCC-ccCCHHHHHHHHHHHHHcCCEEEEEc
Confidence 111 11110 111 16777765532 23566555443344445 46799999999999999999999999
Q ss_pred cccCCCcccccc-cc-cc---cC---CCcc----eeeeccccc-CCcccccccc-cHHHHhhccCCCccCCCCCcHHHHH
Q 013008 288 VQCGLGRTGYLW-AH-EH---YG---IFPD----IMTLAKPLA-GGLPIGAALV-TEKVASAINYGDHGSTFAGSPLVCN 353 (451)
Q Consensus 288 v~tg~gr~G~~~-~~-~~---~~---~~pd----i~t~sK~lg-~G~~iG~v~~-~~~i~~~~~~~~~~~t~~~~~~~~a 353 (451)
+|..+.+.+..+ .. +. ++ ..++ +.+|||.+| .|+|+||+++ ++.+.+.+.... .....+.+++.
T Consensus 240 iY~~~~f~~~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~glpGlRvG~li~~~~~l~~~~~~~~--~~~~vs~~~Q~ 317 (496)
T PLN02376 240 IYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGFRVGIVYSFNDSVVSCARKMS--SFGLVSSQTQL 317 (496)
T ss_pred CccccccCCCCcccHHHhhccccccccCCCeEEEEEeccccCCCCcceEEEEEECCHHHHHHHHHHh--hcCCCCHHHHH
Confidence 998864444322 11 11 01 1233 237999998 7999999998 466666543221 12235677887
Q ss_pred HHHHHHHHhcChHHHHH------------------HHhCCCCcceec-ccceeEEEEecC---------ChHHHHHHHHH
Q 013008 354 AAIAVLDKISNPAFLAS------------------KLARNPHVKDVR-GLGLIIGIEFDV---------SATPVVDACRD 405 (451)
Q Consensus 354 aa~aal~~~~~~~~~~~------------------~~~~~~~~~~v~-g~G~~~~~~~~~---------~~~~~~~~l~~ 405 (451)
++.+.|+ +..+.++ .++.. .+..+. ..|+++|+++.. ...++++.+++
T Consensus 318 a~~~~L~---d~~~~~~~l~~~r~~l~~r~~~l~~~L~~~-gi~~~~~~aG~flwi~l~~~~~~~~~~~~e~~l~~~ll~ 393 (496)
T PLN02376 318 MLASMLS---DDQFVDNFLMESSRRLGIRHKVFTTGIKKA-DIACLTSNAGLFAWMDLRHLLRDRNSFESEIELWHIIID 393 (496)
T ss_pred HHHHHhC---ChhHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCcccCCCceEEEEEEchhhhccCCchhHHHHHHHHHHH
Confidence 7776664 3333211 12222 222233 346899998831 12567787876
Q ss_pred -CCceeeecCC-----CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHh
Q 013008 406 -SGLLVLTAGK-----GNVVRLVPPLIISEQELDQAVEILCKTLPVLD 447 (451)
Q Consensus 406 -~Gv~~~~~~~-----~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~~ 447 (451)
.||.+.|+.. .+++|+++.. .+++++++++++|.+++.+.+
T Consensus 394 ~~gV~v~pGs~F~~~~~g~~Ri~fa~-~~~~~l~~al~rl~~~l~~~~ 440 (496)
T PLN02376 394 KVKLNVSPGSSFRCTEPGWFRICFAN-MDDDTLHVALGRIQDFVSKNK 440 (496)
T ss_pred cCCEEEeCccccCCCCCCEEEEEeeC-CCHHHHHHHHHHHHHHHHHhh
Confidence 4999998631 3578886542 578999999999999986543
No 211
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=99.87 E-value=1.2e-20 Score=192.23 Aligned_cols=329 Identities=13% Similarity=0.093 Sum_probs=186.8
Q ss_pred EEeeccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHH-HHhhccC-----CC--eEEecCCHHHHHHHH
Q 013008 100 YLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAK-RLVACSF-----AD--RVFFSNTGTEANEAA 171 (451)
Q Consensus 100 ~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~-~l~~~~~-----~e--~v~~~~sG~eA~~~a 171 (451)
.|++..|. .|..+|+++.++.+.+....+.......+..+++++ .+.+.++ .+ +|++|+|+++|+..+
T Consensus 96 ~i~l~~g~----p~~~~~~~~~~~~~~~~~~~Y~~p~g~~~~~e~iv~~y~~~~~~~~~~~~~~~~V~it~Gat~al~~~ 171 (521)
T TIGR03801 96 IISYVIDQ----LGFDPDAFLYEMCDGIIGDNYPVPDRMLPHSEKIVHQYLIQEMCGNKPPPGEFDLFAVEGGTAAMCYI 171 (521)
T ss_pred HHhhcCCC----CCCCCCHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHH
Confidence 34554443 344556666776666532111111122233444443 4444321 33 799999999999999
Q ss_pred HHHHHH--HhhhcCCCCCCCCceEEEEcCCccCChhhhhhcc-CCCCcCCCCcCCCC-Ce-eEeeCCCHHHHHHhcCCCC
Q 013008 172 IKFARK--FQRHSNPDSKEPATEFVSFTNSFHGRTMGALALT-SKEHYRSPFEPVMP-GV-NFVEYGNIEATRKLIQPGK 246 (451)
Q Consensus 172 l~~a~~--~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~-~~~~~~~~~~~~~~-~~-~~~~~~d~~~le~~l~~~~ 246 (451)
+.++.. .. +++|+|++.+|+|.++........ +......+..+... +. .+. -|.+++++++.++.
T Consensus 172 ~~~l~~~~ll--------~pGD~Vlv~~P~y~~y~~~~~l~~~g~~vv~i~~~~~~~~g~~~~~--~d~~~l~~~~~~~~ 241 (521)
T TIGR03801 172 FDSLKANELL--------KKGDKIALMTPIFTPYLEIPELPRYDFEVVRIKADEMTEDGTHTWQ--YPDKELEKLRDPSI 241 (521)
T ss_pred HHHHhHhhcC--------CCCCEEEEeCCCcHHHHHHHHHhcCCcEEEEeecccccccccccCC--CCHHHHHHhcCCCC
Confidence 886321 11 268999999999988765433221 11111000000000 00 010 17789998776533
Q ss_pred eEEEEEccccCCCCccccCHHHHHHHHHHHHHh--CCEEEEeccccCCCccccccccccc-CCCcceeeeccccc-CCcc
Q 013008 247 TAAVFVEPIQGEGGIYSATKEFLQFLRDACDDA--GALLVFDEVQCGLGRTGYLWAHEHY-GIFPDIMTLAKPLA-GGLP 322 (451)
Q Consensus 247 ~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~--g~llI~DEv~tg~gr~G~~~~~~~~-~~~pdi~t~sK~lg-~G~~ 322 (451)
.++++++|.|++ | .+.+++.+++|.++|++| |++||+||+|..|.. ......... +...-+.+|||.++ .|||
T Consensus 242 kai~l~nP~NPT-G-~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~-~~~sl~~~~~~~vI~v~SfSK~fg~~G~R 318 (521)
T TIGR03801 242 KALFVVNPSNPP-S-VAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVD-DFRSLFAELPYNTIGVYSFSKYFGATGWR 318 (521)
T ss_pred cEEEEeCCCCCC-C-CCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhcc-cccchhhhCCCCEEEEEcchhhccCchhh
Confidence 444556665544 4 467999999999999987 999999999987742 111011111 11222447999998 6999
Q ss_pred cccccccHH-HHh------------hc------------------------cCCCccCCCCCcHHHHH-----HHHHHHH
Q 013008 323 IGAALVTEK-VAS------------AI------------------------NYGDHGSTFAGSPLVCN-----AAIAVLD 360 (451)
Q Consensus 323 iG~v~~~~~-i~~------------~~------------------------~~~~~~~t~~~~~~~~a-----aa~aal~ 360 (451)
+||++++++ +++ .+ +......|.+.+.+.|. ++.++++
T Consensus 319 lG~i~~~~~~v~d~li~~lp~~~~~~l~~ry~~~~~~p~~~~fidr~vadsr~v~~~~~~g~s~p~Q~q~al~a~~all~ 398 (521)
T TIGR03801 319 LGTIALHKDNIFDKLIAELPEEKKKELDKRYSSLTTEPRKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALMD 398 (521)
T ss_pred hhhhhcCchHHHHHHHHhccHHHHHHHhhhhccccCChhhhhhHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHHHhc
Confidence 999998754 221 11 11112344555555554 2333333
Q ss_pred HhcChHHHHH-----------HHhCCCC-ccee-cccceeEEEEecC------------------ChHHHHHHHHH-CCc
Q 013008 361 KISNPAFLAS-----------KLARNPH-VKDV-RGLGLIIGIEFDV------------------SATPVVDACRD-SGL 408 (451)
Q Consensus 361 ~~~~~~~~~~-----------~~~~~~~-~~~v-~g~G~~~~~~~~~------------------~~~~~~~~l~~-~Gv 408 (451)
..+.+.+. +.+.+.. +... ...|.++++++.. +..+++.+|++ .||
T Consensus 399 --~~~~y~~~~~~~~~~R~~~l~~~Lg~~~~~~~~~g~~Y~~~di~~~~~~~~~~~f~~~l~~~~~~~~~~~~L~~e~gV 476 (521)
T TIGR03801 399 --KENAYKAETKDICRRREKLLFRGLGLPLQEDPNDVAYYTLIDLEEWAEKNYGEEFSSYLKKNYSPVDVLFRLAEETGI 476 (521)
T ss_pred --cchhHHHHHHHHHHHHHHHHHHhcCCCCcCCCCCeEEEEEeehHHHHHHhcchHHHHHHhccCCHHHHHHHHHHhCCE
Confidence 12333322 2233321 1112 3345677777631 34567777775 599
Q ss_pred eeeecCC----CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHhh
Q 013008 409 LVLTAGK----GNVVRLVPPLIISEQELDQAVEILCKTLPVLDS 448 (451)
Q Consensus 409 ~~~~~~~----~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~~~ 448 (451)
.+.|+.. ...+|+++. ..+++++.++.++|.+.+++..+
T Consensus 477 ~v~PG~~Fg~~~~~vRisla-~l~~~~~~~~~~rl~~~~~~~~~ 519 (521)
T TIGR03801 477 VLLPGGGFGGPEWSVRVSLA-NLNEYDYAEIGRAIRKILDEYYE 519 (521)
T ss_pred EEeCchhcCCCCCeEEEEec-CCCHHHHHHHHHHHHHHHHHHHH
Confidence 9998742 246888652 37899999999999999987643
No 212
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.87 E-value=1.2e-19 Score=182.76 Aligned_cols=319 Identities=14% Similarity=0.136 Sum_probs=203.8
Q ss_pred CCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccCCCC-------CHHHHHHHHHHhhccC---CCeEEecCCHHH
Q 013008 97 GREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYY-------SIPQIELAKRLVACSF---ADRVFFSNTGTE 166 (451)
Q Consensus 97 G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~-------~~~~~~l~~~l~~~~~---~e~v~~~~sG~e 166 (451)
+.-|+|..+ .|..++.+.+++.+.++.......... .....++.+.++++++ .+.|++++|+++
T Consensus 19 ~~~yld~a~------~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~~i~~~~~~t~ 92 (401)
T PRK10874 19 AGVYLDSAA------TALKPQAVIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLLNAPDAKNIVWTRGTTE 92 (401)
T ss_pred ceEEEeCCc------ccCCCHHHHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCHHH
Confidence 457888655 445678899999888865321111111 2225677788888887 457999999999
Q ss_pred HHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhh---hccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcC
Q 013008 167 ANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGAL---ALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQ 243 (451)
Q Consensus 167 A~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~ 243 (451)
++..+++.+..-. ..++++||+.++.|++...... ...|..... .+...+. ..|++++++.+.
T Consensus 93 ~i~~~~~~~~~~~-------~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~---v~~~~~~----~~d~~~l~~~i~ 158 (401)
T PRK10874 93 SINLVAQSYARPR-------LQPGDEIIVSEAEHHANLVPWLMVAQQTGAKVVK---LPLGADR----LPDVDLLPELIT 158 (401)
T ss_pred HHHHHHHHhhhcc-------CCCcCEEEECCcchHHHHHHHHHHHHHhCCEEEE---EecCCCC----cCCHHHHHHhcC
Confidence 9999988653100 0157899999999876321111 111211100 1111111 127899999996
Q ss_pred CCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccccccCCCcceeeec--ccccCCc
Q 013008 244 PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLA--KPLAGGL 321 (451)
Q Consensus 244 ~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~t~s--K~lg~G~ 321 (451)
+ ++++|++..+++.+|.+.+ +++|.++|+++|+++|+|++|. +|... .+...+.+|+.++| |.+|. .
T Consensus 159 ~-~t~lv~i~~~~n~tG~~~~----~~~i~~l~~~~g~~~ivD~a~~-~g~~~----~~~~~~~~d~~~~s~~K~~gp-~ 227 (401)
T PRK10874 159 P-RTRILALGQMSNVTGGCPD----LARAITLAHQAGMVVMVDGAQG-AVHFP----ADVQALDIDFYAFSGHKLYGP-T 227 (401)
T ss_pred c-CcEEEEEeCCcccccCcCC----HHHHHHHHHHcCCEEEEECCcc-ccccc----CCchhcCCCEEEEecccccCC-C
Confidence 5 5667777777777787777 8999999999999999999995 33221 11122347776655 96653 2
Q ss_pred ccccccccHHHHhhccCCCcc------------------CCC---CCcHHHHHHHHHHHHHhcChHH---HHH-------
Q 013008 322 PIGAALVTEKVASAINYGDHG------------------STF---AGSPLVCNAAIAVLDKISNPAF---LAS------- 370 (451)
Q Consensus 322 ~iG~v~~~~~i~~~~~~~~~~------------------~t~---~~~~~~~aaa~aal~~~~~~~~---~~~------- 370 (451)
.+|++++++++++.+.+...+ ..| +.|..++++..++++.+.+.++ .++
T Consensus 228 G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~~l~~~g~~~~~~~~~~l~~~ 307 (401)
T PRK10874 228 GIGVLYGKSELLEAMSPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALEWLADIDINQAESWSRSLATL 307 (401)
T ss_pred ccEEEEEchHHHhcCCCeecCCcceEeeccCccCCCCChhhccCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 368888999988876532100 001 2344566666677766533211 111
Q ss_pred ---HHhCCCCcceec-ccceeEEEEec-CChHHHHHHHHHCCceeeecC-----------CCCEEEEeCCCCCCHHHHHH
Q 013008 371 ---KLARNPHVKDVR-GLGLIIGIEFD-VSATPVVDACRDSGLLVLTAG-----------KGNVVRLVPPLIISEQELDQ 434 (451)
Q Consensus 371 ---~~~~~~~~~~v~-g~G~~~~~~~~-~~~~~~~~~l~~~Gv~~~~~~-----------~~~~iri~~~~~~t~e~i~~ 434 (451)
.++++|.+..+. ..+.++.+.++ ....++.+.|.++||.+.++. ..+.+|+++..-+|++|+++
T Consensus 308 l~~~l~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~L~~~gI~v~~g~~~~~~~~~~~g~~~~iRiS~~~~nt~edid~ 387 (401)
T PRK10874 308 AEDALAKLPGFRSFRCQDSSLLAFDFAGVHHSDLVTLLAEYGIALRAGQHCAQPLLAALGVTGTLRASFAPYNTQSDVDA 387 (401)
T ss_pred HHHHHhcCCCEEEeCCCCCcEEEEEECCcCHHHHHHHHHHCCcEEeccccchHHHHHHhCCCCEEEEEecccCCHHHHHH
Confidence 223454443232 33456666663 346788888999999987643 12679999999999999999
Q ss_pred HHHHHHHHHHHH
Q 013008 435 AVEILCKTLPVL 446 (451)
Q Consensus 435 ~l~~l~~~l~~~ 446 (451)
+++.|+++++.+
T Consensus 388 ll~al~~~~~~~ 399 (401)
T PRK10874 388 LVNAVDRALELL 399 (401)
T ss_pred HHHHHHHHHHHh
Confidence 999999988765
No 213
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.87 E-value=1.7e-20 Score=186.28 Aligned_cols=276 Identities=17% Similarity=0.181 Sum_probs=180.8
Q ss_pred HHHHHHHHhhccC--CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCC-ceEEEEcCCccCChhhhhhccCCCCcCC
Q 013008 142 QIELAKRLVACSF--ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPA-TEFVSFTNSFHGRTMGALALTSKEHYRS 218 (451)
Q Consensus 142 ~~~l~~~l~~~~~--~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~-~~ii~~~~~yhg~~~~~~~~~~~~~~~~ 218 (451)
..+|.+.++++++ .++|++++|+++++..++++... ++ +.|++.+|+|..+...+ ...|.....
T Consensus 61 ~~~lr~~ia~~~~~~~~~I~~t~G~~~~l~~~~~~~~~-----------~g~~~vlv~~p~y~~~~~~~-~~~g~~~~~- 127 (364)
T PRK04781 61 PPGLRSALAALYGCAPEQLLIGRGSDEAIDLLVRALCV-----------PGRDAVLVTPPVFGMYAVCA-RLQNAPLVE- 127 (364)
T ss_pred HHHHHHHHHHHhCcChHHEEEeCCHHHHHHHHHHHhcC-----------CCCCeEEEcCCChHHHHHHH-HHcCCEEEE-
Confidence 5677788888776 67899999999999999986541 35 78999999885443322 222211111
Q ss_pred CCcCCC-CCeeEeeCCCHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccc
Q 013008 219 PFEPVM-PGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGY 297 (451)
Q Consensus 219 ~~~~~~-~~~~~~~~~d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~ 297 (451)
.+.. ++..+ ..|++++++.+...++.+|++...++++|. ..+.+.++++.+.|+ +++++|+||+|..|.....
T Consensus 128 --v~~~~~~~~~--~~d~~~l~~~~~~~~~~lv~l~~p~NPTG~-~~~~~~~~~l~~~~~-~~~~iI~Deay~~f~~~~~ 201 (364)
T PRK04781 128 --VPLVDGADGF--HADVPAIVAAALASNAKLVFLCSPSNPAGS-AIALDQIERALQALQ-GKALVVVDEAYGEFSDVPS 201 (364)
T ss_pred --EecCCCccCC--CcCHHHHHHHHhccCCeEEEEcCCCCCCCC-CcCHHHHHHHHHhCC-CCcEEEEeCcchhhcCCcc
Confidence 1110 00000 026777765543335566666555555665 568888888888886 4899999999988843211
Q ss_pred cc-cccccCCCcceeeeccccc-CCcccccccccHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH-----
Q 013008 298 LW-AHEHYGIFPDIMTLAKPLA-GGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS----- 370 (451)
Q Consensus 298 ~~-~~~~~~~~pdi~t~sK~lg-~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~----- 370 (451)
.. ..+.++-..-+.+|||++| .|+|+||+++++++++.+... ...++.+.+++.++.++|+.-. .++..+
T Consensus 202 ~~~~~~~~~~vi~~~SfSK~~gl~GlRvGy~v~~~~l~~~l~~~--~~~~~~~~~~~~~a~~~l~~~~-~~~~~~~~~~~ 278 (364)
T PRK04781 202 AVGLLARYDNLAVLRTLSKAHALAAARIGSLIANAELIAVLRRC--QAPYPVPTPCAALAEQALSAPA-LAVTARRVAEV 278 (364)
T ss_pred hHHHHhhCCCEEEEecChhhcccccceeeeeeCCHHHHHHHHhc--cCCCCCCHHHHHHHHHHHhccc-HHHHHHHHHHH
Confidence 11 1122222233448999999 799999999999999988643 2356778888888887775310 011111
Q ss_pred ---------HHhCCCCc-ceecccceeEEEEecCChHHHHHHHHHCCceeeecCC----CCEEEEeCCCCCCHHHHHHHH
Q 013008 371 ---------KLARNPHV-KDVRGLGLIIGIEFDVSATPVVDACRDSGLLVLTAGK----GNVVRLVPPLIISEQELDQAV 436 (451)
Q Consensus 371 ---------~~~~~~~~-~~v~g~G~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~----~~~iri~~~~~~t~e~i~~~l 436 (451)
.++.++.+ ...++.|+++|+.+. +..++.+.|.++||.+.++.. ++++||+.. +.++.++++
T Consensus 279 ~~~r~~l~~~L~~~~~~~~~~p~~g~f~~~~~~-~~~~~~~~l~~~gI~v~~~~~~~~~~~~~Ris~~---~~~~~~~l~ 354 (364)
T PRK04781 279 RAERERLHAALAQLPGVRRVYPSQGNFLLVRFD-DAEAAFQALLAAGVVVRDQRAAPRLSDALRITLG---TPEQNDRVL 354 (364)
T ss_pred HHHHHHHHHHHHhCCCCCeECCCCCcEEEEEcC-CHHHHHHHHHHCCeEEeeCCCCCCCCCeEEEeCC---CHHHHHHHH
Confidence 33445433 235567999998885 467888999999999988631 367888644 688899999
Q ss_pred HHHHHHH
Q 013008 437 EILCKTL 443 (451)
Q Consensus 437 ~~l~~~l 443 (451)
++|++..
T Consensus 355 ~al~~~~ 361 (364)
T PRK04781 355 AALQRTQ 361 (364)
T ss_pred HHHHHHH
Confidence 9888754
No 214
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=99.87 E-value=2.1e-20 Score=187.93 Aligned_cols=319 Identities=15% Similarity=0.100 Sum_probs=187.6
Q ss_pred EEEeeccCcccccCCCCC--HHHHHHHHHHHhhcc---cccCCCCCHHHHHHHHHHhhccC----CCeE--EecCCHHHH
Q 013008 99 EYLDLSSGIAVNALGHGD--ADWIKAVVDQANVLT---HVSNMYYSIPQIELAKRLVACSF----ADRV--FFSNTGTEA 167 (451)
Q Consensus 99 ~~iD~~~~~~~~~lG~~~--p~v~~a~~~~~~~~~---~~~~~~~~~~~~~l~~~l~~~~~----~e~v--~~~~sG~eA 167 (451)
..|||..|..+.+-++.+ +.+.+++.+.++... +....+..+.++.+++++.+..+ .+++ ++|+|+++|
T Consensus 27 ~~i~l~~g~~~~~~~~~p~~~~l~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~i~v~iT~Ga~~a 106 (396)
T PRK09257 27 DKVNLGVGVYKDEQGRTPVLRAVKKAEARLLETETTKNYLPIEGLAAYRQAVQELLFGADSPALAAGRVATVQTPGGTGA 106 (396)
T ss_pred CcEecceeeEECCCCCEeccHHHHHHHHHhcccccCCCcCCCCCCHHHHHHHHHHhcCCCCcccccCeEEEEecCCccHH
Confidence 468888886533223333 678888877664321 11122223335566666554432 5566 999999999
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCC-CCCeeEeeCCCHHHHHHhcCC--
Q 013008 168 NEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPV-MPGVNFVEYGNIEATRKLIQP-- 244 (451)
Q Consensus 168 ~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~~le~~l~~-- 244 (451)
+..++++.... +++|.|++.+|+|.++.......+.... . .+. .++.. --|++++++.+..
T Consensus 107 l~~~~~~l~~~---------~pGd~Vlv~~P~y~~~~~~~~~~g~~~v-~---v~~~~~~~~---~~d~~~l~~~~~~~~ 170 (396)
T PRK09257 107 LRVGADFLKRA---------FPDAKVWVSDPTWPNHRAIFEAAGLEVK-T---YPYYDAATK---GLDFDAMLADLSQAP 170 (396)
T ss_pred HHHHHHHHHHh---------CCCCeEEECCCCcccHHHHHHHcCCcEE-E---EeccccccC---ccCHHHHHHHHHhCC
Confidence 99998755321 1689999999999988755544332221 1 111 01000 0278999888762
Q ss_pred CCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcc-cc-cccc---ccc-CCCcceeeeccccc
Q 013008 245 GKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRT-GY-LWAH---EHY-GIFPDIMTLAKPLA 318 (451)
Q Consensus 245 ~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~-G~-~~~~---~~~-~~~pdi~t~sK~lg 318 (451)
.+..++++...++++| .+++.+.+++|.++|++||+++|+||+|.+|... +. .... ... ....-+.+|||.++
T Consensus 171 ~~~~~~i~~~p~NPTG-~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~ 249 (396)
T PRK09257 171 AGDVVLLHGCCHNPTG-ADLTPEQWDELAELLKERGLIPFLDIAYQGFGDGLEEDAYGLRAFAAAGLELLVASSFSKNFG 249 (396)
T ss_pred CCCEEEEeCCCCCCCC-CCCCHHHHHHHHHHHHhCCcEEEEeccccccccchHHHHHHHHHHHhcCCcEEEEEEcCCcCc
Confidence 2233333333444445 4679999999999999999999999999988542 11 1111 111 12233458999999
Q ss_pred C-Ccccccccc---cHH----HHhhccCCCccCCCCCcHHHHHHHHHHHHHhc-C---hHHHHH--------------HH
Q 013008 319 G-GLPIGAALV---TEK----VASAINYGDHGSTFAGSPLVCNAAIAVLDKIS-N---PAFLAS--------------KL 372 (451)
Q Consensus 319 ~-G~~iG~v~~---~~~----i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~-~---~~~~~~--------------~~ 372 (451)
. |+|+||+++ +++ ++..+.........+.+++.+.++.+.|+.-. . ++++++ .+
T Consensus 250 ~~GlRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~rr~~l~~~L 329 (396)
T PRK09257 250 LYGERVGALSVVAEDAEEADRVLSQLKATIRTNYSNPPAHGAAIVATILNDPELRAEWEAELEEMRERIKAMRQLLVEAL 329 (396)
T ss_pred cccccceeEEEEeCCHHHHHHHHHHHHHHhhhhcCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5 999999873 443 33333222222333457777777766664210 0 111111 22
Q ss_pred hCCC---Cccee-cccceeEEEEecCChHHHHHHH-HHCCceeeecCCCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 013008 373 ARNP---HVKDV-RGLGLIIGIEFDVSATPVVDAC-RDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTL 443 (451)
Q Consensus 373 ~~~~---~~~~v-~g~G~~~~~~~~~~~~~~~~~l-~~~Gv~~~~~~~~~~iri~~~~~~t~e~i~~~l~~l~~~l 443 (451)
+++. .+... ...|+++|+.++ . +++..+ .++||.+.|. + ||.++ +.++++|++++++|.+++
T Consensus 330 ~~~~~~~~~~~~~p~gg~~~w~~l~--~-~~~~~l~~~~~V~~~p~---~--ri~~~-~~~~~~i~~~~~~i~~~~ 396 (396)
T PRK09257 330 KAKGPSRDFDFIARQRGMFSYSGLT--P-EQVDRLREEFGVYAVGS---G--RINVA-GLNESNIDYVAEAIAAVL 396 (396)
T ss_pred HhcCCCCCcccccccceEEEecCCC--H-HHHHHHHHcCCEEEcCC---C--eEEEe-eCCHHHHHHHHHHHHhhC
Confidence 2221 12222 334777777653 2 344445 5679988874 2 77554 379999999999998753
No 215
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.86 E-value=1.9e-19 Score=179.69 Aligned_cols=297 Identities=19% Similarity=0.182 Sum_probs=193.7
Q ss_pred CCCCCHHHHHHHHHHHhhcccccCCCC-------CHHHHHHHHHHhhccCC---CeEEecCCHHHHHHHHHHHHHHHhhh
Q 013008 112 LGHGDADWIKAVVDQANVLTHVSNMYY-------SIPQIELAKRLVACSFA---DRVFFSNTGTEANEAAIKFARKFQRH 181 (451)
Q Consensus 112 lG~~~p~v~~a~~~~~~~~~~~~~~~~-------~~~~~~l~~~l~~~~~~---e~v~~~~sG~eA~~~al~~a~~~~~~ 181 (451)
.|..++.+.+++.+.++.....+..+. .....++.+.++++++. +.+++++|+++|+..+++.+.....
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~~~- 86 (373)
T cd06453 8 TSQKPQPVIDAIVDYYRHYNANVHRGVHELSARATDAYEAAREKVARFINAPSPDEIIFTRNTTEAINLVAYGLGRANK- 86 (373)
T ss_pred ccCCCHHHHHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCCHHHHHHHHHHHhhhcCC-
Confidence 556788999999988865422111111 12255677888888873 4899999999999999987662100
Q ss_pred cCCCCCCCCceEEEEcCCccCChhhhhh---ccCCCCcCCCCcCCCCCeeEeeC-----CCHHHHHHhcCCCCeEEEEEc
Q 013008 182 SNPDSKEPATEFVSFTNSFHGRTMGALA---LTSKEHYRSPFEPVMPGVNFVEY-----GNIEATRKLIQPGKTAAVFVE 253 (451)
Q Consensus 182 ~~~~~~~~~~~ii~~~~~yhg~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~le~~l~~~~~aavi~e 253 (451)
++++||+.++.|.+....... ..+ ..+..++. -|++++++.+.+ ++++|++.
T Consensus 87 -------~g~~vl~~~~~~~~~~~~~~~~~~~~g------------~~~~~v~~~~~~~~d~~~l~~~l~~-~~~~v~~~ 146 (373)
T cd06453 87 -------PGDEIVTSVMEHHSNIVPWQQLAERTG------------AKLKVVPVDDDGQLDLEALEKLLTE-RTKLVAVT 146 (373)
T ss_pred -------CCCEEEECcchhHHHHHHHHHHHhhcC------------cEEEEeecCCCCCcCHHHHHHHhcC-CceEEEEe
Confidence 478899988887653211111 111 11222222 278999999875 67777777
Q ss_pred cccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccccccCCCcceeeec--ccccCCcccccccccHH
Q 013008 254 PIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLA--KPLAGGLPIGAALVTEK 331 (451)
Q Consensus 254 p~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~t~s--K~lg~G~~iG~v~~~~~ 331 (451)
.++++.|.+.+ +++|.++|++||++||+|++|+ +|.. ........+|++++| |.+++ .++|+++++++
T Consensus 147 ~~~~~tG~~~~----~~~i~~~~~~~~~~li~D~a~~-~~~~----~~~~~~~~~d~~~~s~~K~~~~-~g~g~~~~~~~ 216 (373)
T cd06453 147 HVSNVLGTINP----VKEIGEIAHEAGVPVLVDGAQS-AGHM----PVDVQDLGCDFLAFSGHKMLGP-TGIGVLYGKEE 216 (373)
T ss_pred CcccccCCcCC----HHHHHHHHHHcCCEEEEEhhhh-cCce----eeeccccCCCEEEeccccccCC-CCcEEEEEchH
Confidence 77677787766 8999999999999999999986 3322 111123457888888 99986 66899999999
Q ss_pred HHhhccCCCccC------------------CC---CCcHHHHHHHHHHHHHhcChHH---HHH----------HHhCCCC
Q 013008 332 VASAINYGDHGS------------------TF---AGSPLVCNAAIAVLDKISNPAF---LAS----------KLARNPH 377 (451)
Q Consensus 332 i~~~~~~~~~~~------------------t~---~~~~~~~aaa~aal~~~~~~~~---~~~----------~~~~~~~ 377 (451)
+.+.+.+...+. .| +.+..+..+..++++.+.+.++ .++ .+++++.
T Consensus 217 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~l~~~l~~~~~ 296 (373)
T cd06453 217 LLEEMPPYGGGGEMIEEVSFEETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIAAHEHELTAYALERLSEIPG 296 (373)
T ss_pred HhhcCCCeecCCCccccccccccccCCCccccCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 888776421110 01 2333444455556665543222 111 2234443
Q ss_pred ccee---cccceeEEEEec-CChHHHHHHHHHCCceeeecC-----------CCCEEEEeCCCCCCHHHHHHHHHHH
Q 013008 378 VKDV---RGLGLIIGIEFD-VSATPVVDACRDSGLLVLTAG-----------KGNVVRLVPPLIISEQELDQAVEIL 439 (451)
Q Consensus 378 ~~~v---~g~G~~~~~~~~-~~~~~~~~~l~~~Gv~~~~~~-----------~~~~iri~~~~~~t~e~i~~~l~~l 439 (451)
+..+ ...+.++.+.+. .+..++.+.|.++||.+.++. .++.+|+++...+|++|+|++++.|
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~gi~i~~g~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~~~~~l 373 (373)
T cd06453 297 VRVYGDAEDRAGVVSFNLEGIHPHDVATILDQYGIAVRAGHHCAQPLMRRLGVPGTVRASFGLYNTEEEIDALVEAL 373 (373)
T ss_pred eEEeCCccccCCeEEEEECCcCHHHHHHHHHHCCEEeccCccchhHHHHHhCCCCeEEEEecCCCCHHHHHHHHhhC
Confidence 3322 224566777764 456789999999999886532 1367999999999999999999864
No 216
>PRK08637 hypothetical protein; Provisional
Probab=99.86 E-value=5.9e-20 Score=184.19 Aligned_cols=282 Identities=12% Similarity=0.125 Sum_probs=179.8
Q ss_pred HHHHHHHHhhccC------CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCC
Q 013008 142 QIELAKRLVACSF------ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEH 215 (451)
Q Consensus 142 ~~~l~~~l~~~~~------~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~ 215 (451)
+..+++++.+..+ .+++++|+|+++|+..+++++.. ++|.|++.+|+|+.+........+...
T Consensus 50 r~~ia~~~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~-----------~gd~Vlv~~P~y~~~~~~~~~~~g~~v 118 (388)
T PRK08637 50 RDLWQEKMLRENPSLSGKKMSLPIVTNALTHGLSLVADLFVD-----------QGDTVLLPDHNWGNYKLTFNTRRGAEI 118 (388)
T ss_pred HHHHHHHHhccCccccccccceeeEccchHHHHHHHHHHhcC-----------CCCEEEEcCCCCccHHHHHHHhcCCEE
Confidence 5555555554322 25789999999999999886652 689999999999888654322222221
Q ss_pred cCCCCcCCC-CCeeEeeCCCHHHHHHhcC---CCCeEEEEEccccCCCCccccCHHHHHHHHHHHHH-----hCCEEEEe
Q 013008 216 YRSPFEPVM-PGVNFVEYGNIEATRKLIQ---PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDD-----AGALLVFD 286 (451)
Q Consensus 216 ~~~~~~~~~-~~~~~~~~~d~~~le~~l~---~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~-----~g~llI~D 286 (451)
.. .+.. .+.. -|++++++.++ +....++++...++++| ..++.+.+++|+++|++ |+++||+|
T Consensus 119 v~---v~~~~~~~~----~d~~~l~~~~~~~~~~~~~~~~~~~P~NPTG-~~~s~~~~~~l~~~~~~~~~~~~~~~iI~D 190 (388)
T PRK08637 119 VT---YPIFDEDGG----FDTDALKEALQAAYNKGKVIVILNFPNNPTG-YTPTEKEATAIVEAIKELADAGTKVVAVVD 190 (388)
T ss_pred EE---ecccCCCCc----CCHHHHHHHHHhhccCCCEEEEEeCCCCCCC-CCCCHHHHHHHHHHHHHHHhcCCcEEEEec
Confidence 11 1110 1111 17899988875 22333343332344444 57899999999999886 99999999
Q ss_pred ccccCCCcccccc-c-ccc-cCCCcce--e---eeccccc-CCccccccccc------HHHHhhccCC----CccCCCCC
Q 013008 287 EVQCGLGRTGYLW-A-HEH-YGIFPDI--M---TLAKPLA-GGLPIGAALVT------EKVASAINYG----DHGSTFAG 347 (451)
Q Consensus 287 Ev~tg~gr~G~~~-~-~~~-~~~~pdi--~---t~sK~lg-~G~~iG~v~~~------~~i~~~~~~~----~~~~t~~~ 347 (451)
|+|.+|-+.+... . +.. .+....+ + ++||.++ .|+|+||++.+ +++++.+... .....++.
T Consensus 191 e~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGlRlG~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 270 (388)
T PRK08637 191 DAYFGLFYEDSYKESLFAALANLHSNILAVKLDGATKEEFVWGFRVGFITFGTKAGSSQTVKEALEKKVKGLIRSNISNG 270 (388)
T ss_pred ccchhcccCCccchhhHHHhhcccccceEEEeccccccCCCcccceEEEEEccccCCcHHHHHHHHHHHHHHhhcccCCC
Confidence 9998875544321 1 111 1222232 2 6899876 69999999843 6777766421 11223467
Q ss_pred cHHHHHHHHHHHHHhcChHHHHH-----------------HHhCCC---Ccceec-ccceeEEEEec-CChHHHHHHHH-
Q 013008 348 SPLVCNAAIAVLDKISNPAFLAS-----------------KLARNP---HVKDVR-GLGLIIGIEFD-VSATPVVDACR- 404 (451)
Q Consensus 348 ~~~~~aaa~aal~~~~~~~~~~~-----------------~~~~~~---~~~~v~-g~G~~~~~~~~-~~~~~~~~~l~- 404 (451)
|.++++++.++|+ +..+.++ .++.++ .+...+ ..|+++|+.++ .+..++++.|+
T Consensus 271 s~~~q~a~~~~l~---~~~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~l~~~l~~ 347 (388)
T PRK08637 271 PHPSQSAVLRALN---SPEFDKEKQEKFQILKERYEKTKEVLYDGKYDDAWQAYPFNSGYFMCLKLKGVDAEELRVHLLE 347 (388)
T ss_pred CcHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcccccccceEEEEecCChHHHHHHHHHHhh
Confidence 8889999888874 2222111 122221 222233 34778888874 24567888887
Q ss_pred HCCceeeecCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHh
Q 013008 405 DSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTLPVLD 447 (451)
Q Consensus 405 ~~Gv~~~~~~~~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~~ 447 (451)
++||.+.+.+. +.+|++.+. .+++++++++++|.++++.++
T Consensus 348 ~~gv~~~~~~~-~~iRi~~~~-~~~~~i~~~~~~l~~~~~~~~ 388 (388)
T PRK08637 348 KYGIGTIALNE-TDLRIAFSC-VEEEDIPELFDSIYKAIKDLR 388 (388)
T ss_pred hcceEEEeccC-CceEEEeec-CCHHHHHHHHHHHHHHHHhcC
Confidence 56998876544 679997665 689999999999999997653
No 217
>PRK07908 hypothetical protein; Provisional
Probab=99.86 E-value=1.9e-19 Score=178.02 Aligned_cols=300 Identities=17% Similarity=0.131 Sum_probs=185.7
Q ss_pred CCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHhhccC--CCeEEecCCHHHHHHHHHHH
Q 013008 97 GREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSF--ADRVFFSNTGTEANEAAIKF 174 (451)
Q Consensus 97 G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~e~v~~~~sG~eA~~~al~~ 174 (451)
+..++||..|.. .++ .++.+++++.+.+..... +.......+|.+.++++++ .++|++|+|+++|+..+++
T Consensus 21 ~~~~~~l~~~~~--~~~-~~~~~~~~~~~~~~~~~~---Y~~~~g~~~lr~aia~~~~~~~~~I~it~Ga~~al~~~~~- 93 (349)
T PRK07908 21 GPGLLDFAVNVR--HDT-PPEWLRERLAARLGDLAA---YPSTEDERRARAAVAARHGRTPDEVLLLAGAAEGFALLAR- 93 (349)
T ss_pred CCCeEEecCCCC--CCC-CCHHHHHHHHHHhhHhhc---CCCccchHHHHHHHHHHhCcChhhEEECCCHHHHHHHHHh-
Confidence 578999988764 343 678899999988765321 1112235567777777775 7899999999999998877
Q ss_pred HHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEcc
Q 013008 175 ARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEP 254 (451)
Q Consensus 175 a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep 254 (451)
+. + +++++..|+|.+....... .|..... .+...+.. -|++++ .+ +++++++..
T Consensus 94 l~------------~-~~viv~~P~y~~~~~~~~~-~G~~i~~---v~~~~~~~----~d~~~l----~~-~~~~i~l~n 147 (349)
T PRK07908 94 LR------------P-RRAAVVHPSFTEPEAALRA-AGIPVHR---VVLDPPFR----LDPAAV----PD-DADLVVIGN 147 (349)
T ss_pred cC------------C-CeEEEeCCCChHHHHHHHH-cCCEEEe---eccCcccC----cChhHh----cc-CCCEEEEcC
Confidence 22 3 5678889999776543322 2222111 11111110 144443 22 344555533
Q ss_pred ccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccccccCCCcc---eeeeccccc-CCcccccccccH
Q 013008 255 IQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPD---IMTLAKPLA-GGLPIGAALVTE 330 (451)
Q Consensus 255 ~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pd---i~t~sK~lg-~G~~iG~v~~~~ 330 (451)
.++++|.+. +. ++|.++|+ +++++|+||+|..| ..+........+. ++ +.+|||.++ .|+|+||+++++
T Consensus 148 p~NPTG~~~-~~---~~l~~l~~-~~~~iIvDe~y~~~-~~~~~~~l~~~~~-~~~i~i~S~SK~~~l~GlRiG~~~~~~ 220 (349)
T PRK07908 148 PTNPTSVLH-PA---EQLLALRR-PGRILVVDEAFADA-VPGEPESLAGDDL-PGVLVLRSLTKTWSLAGLRVGYALGAP 220 (349)
T ss_pred CCCCCCCCc-CH---HHHHHHHh-cCCEEEEECcchhh-ccCCccccccccC-CCEEEEeecccccCCccceeeeeecCH
Confidence 345556544 44 46677776 47888899999876 2333211111111 23 237899998 799999999999
Q ss_pred HHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHHH--------------HHhCCCCcceec-ccceeEEEEecCC
Q 013008 331 KVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS--------------KLARNPHVKDVR-GLGLIIGIEFDVS 395 (451)
Q Consensus 331 ~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~--------------~~~~~~~~~~v~-g~G~~~~~~~~~~ 395 (451)
++++.+..... .+..+++.++++.+.++. ....++++ .++++ .+.... ..|.++|+.++.
T Consensus 221 ~~~~~~~~~~~--~~~~~~~~~~a~~~~~~~-~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~~~~p~~g~~~~~~~~~- 295 (349)
T PRK07908 221 DVLARLTRGRA--HWPVGTLQLEAIAACCAP-RAVAEAAADAARLAADRAEMVAGLRAV-GARVVDPAAAPFVLVRVPD- 295 (349)
T ss_pred HHHHHHHhcCC--CCCccHHHHHHHHHHhcc-cchHHHHHHHHHHHHHHHHHHHHHHhC-CcEeccCCCceEEEEECCc-
Confidence 99988764322 245566666665554431 01111111 22223 233233 568888888753
Q ss_pred hHHHHHHHHHCCceeeecCC-----CCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q 013008 396 ATPVVDACRDSGLLVLTAGK-----GNVVRLVPPLIISEQELDQAVEILCKTLP 444 (451)
Q Consensus 396 ~~~~~~~l~~~Gv~~~~~~~-----~~~iri~~~~~~t~e~i~~~l~~l~~~l~ 444 (451)
...+.+.|.++||.+.++.. .+++|+++ .+++++++++++|++++.
T Consensus 296 ~~~~~~~l~~~gI~v~~g~~f~~~~~~~vRis~---~~~~~~~~l~~al~~~~~ 346 (349)
T PRK07908 296 AELLRKRLRERGIAVRRGDTFPGLDPDYLRLAV---RPRAEVPVLVQALAEILK 346 (349)
T ss_pred HHHHHHHHHhCCEEEEECCCCCCCCCCeEEEEe---CCCccHHHHHHHHHHHHh
Confidence 56788888899999988631 36899976 378899999999988764
No 218
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.86 E-value=4.5e-20 Score=182.80 Aligned_cols=267 Identities=17% Similarity=0.205 Sum_probs=174.2
Q ss_pred HHHHHHHHhhccC--CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCC-ceEEEEcCCccCChhhhhhccCCCCcCC
Q 013008 142 QIELAKRLVACSF--ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPA-TEFVSFTNSFHGRTMGALALTSKEHYRS 218 (451)
Q Consensus 142 ~~~l~~~l~~~~~--~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~-~~ii~~~~~yhg~~~~~~~~~~~~~~~~ 218 (451)
..+|.+.++++++ .++|++++|+++++..++++... ++ +.|++.+|+|..+...+...+. ....
T Consensus 62 ~~~Lr~aia~~~~~~~~~I~it~Gs~~~i~~~~~~~~~-----------~g~d~vlv~~P~y~~y~~~~~~~g~-~v~~- 128 (354)
T PRK04635 62 PPELINAYSAYAGVAPEQILTSRGADEAIELLIRAFCE-----------PGQDSIACFGPTYGMYAISAETFNV-GVKA- 128 (354)
T ss_pred HHHHHHHHHHHhCcCHHHEEEeCCHHHHHHHHHHHhcC-----------CCCCeEEEcCCChHHHHHHHHHcCC-EEEE-
Confidence 5778888888876 77999999999999999986541 45 8899999999876543322221 1100
Q ss_pred CCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCccccc
Q 013008 219 PFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYL 298 (451)
Q Consensus 219 ~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~ 298 (451)
.|...+.. -|++.++. + + ++++|++...++++|. ..+.+.+++|.+.|+ +++||+||+|..|......
T Consensus 129 --v~~~~~~~----~~~~~l~~-~-~-~~~li~i~nP~NPTG~-~~~~~~l~~l~~~~~--~~~vivDeay~~~~~~~s~ 196 (354)
T PRK04635 129 --LPLTADYQ----LPLDYIEQ-L-D-GAKLVFICNPNNPTGT-VIDRADIEQLIEMTP--DAIVVVDEAYIEFCPEYSV 196 (354)
T ss_pred --EecCCCCC----CCHHHHHh-c-c-CCCEEEEeCCCCCCCc-cCCHHHHHHHHHhCC--CcEEEEeCchHhhccCcch
Confidence 11111111 16777763 3 3 4555555554555565 457777888887776 4999999999877421111
Q ss_pred ccccccCCCcc---eeeeccccc-CCcccccccccHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHH---H-
Q 013008 299 WAHEHYGIFPD---IMTLAKPLA-GGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLA---S- 370 (451)
Q Consensus 299 ~~~~~~~~~pd---i~t~sK~lg-~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~---~- 370 (451)
.......+. +.+|||.++ +|+|+||+++++++++.+... ...++.+.+.+.++.++|+....+.+.+ .
T Consensus 197 --~~~~~~~~~~iv~~S~SK~~~l~GlRlG~~i~~~~~~~~l~~~--~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~ 272 (354)
T PRK04635 197 --ADLLASYPNLVVLRTLSKAFALAGARCGFTLANEELIEILMRV--IAPYPVPLPVSEIATQALSEAGLARMKFQVLDL 272 (354)
T ss_pred --HHHHhhCCCEEEEechHHHhhhhHHHHhhhhCCHHHHHHHHhh--cCCCCCCHHHHHHHHHHHhcccHHHHHHHHHHH
Confidence 111111233 348999998 799999999999999887532 2345667777777777775210011111 1
Q ss_pred ---------HHhCCCCcceecccceeEEEEecCChHHHHHHHHHCCceeeecCC---CCEEEEeCCCCCCHHHHHHHHHH
Q 013008 371 ---------KLARNPHVKDVRGLGLIIGIEFDVSATPVVDACRDSGLLVLTAGK---GNVVRLVPPLIISEQELDQAVEI 438 (451)
Q Consensus 371 ---------~~~~~~~~~~v~g~G~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~---~~~iri~~~~~~t~e~i~~~l~~ 438 (451)
.+++++.+...++.|.++++.+. +..++.+.|.++||.+...+. ++.+|+++. ++|++++++++
T Consensus 273 ~~~r~~l~~~L~~~~~~~~~~~~g~f~~~~~~-~~~~~~~~l~~~gv~v~~~~~~~~~~~lRis~~---~~e~~~~l~~a 348 (354)
T PRK04635 273 NAQGARLQAALSMYGGAKVLEGNGNYVLAKFD-DVDAVFKALWDAGIVARAYKDPRLANCIRFSFS---NRAETDKLIGL 348 (354)
T ss_pred HHHHHHHHHHHHhCCCceECCCCCcEEEEECC-CHHHHHHHHHHCCEEEEECCCCCCCCeEEEEeC---CHHHHHHHHHH
Confidence 23344434445567888888774 467788889999999976532 367899743 78999999998
Q ss_pred HHH
Q 013008 439 LCK 441 (451)
Q Consensus 439 l~~ 441 (451)
|++
T Consensus 349 l~~ 351 (354)
T PRK04635 349 IRN 351 (354)
T ss_pred HHH
Confidence 875
No 219
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.85 E-value=5.6e-19 Score=176.93 Aligned_cols=307 Identities=12% Similarity=0.051 Sum_probs=196.4
Q ss_pred cccCCCCCHHHHHHHHHHHhhcccccC------CCCCHHHHHHHHHHhhccCCCeEEecCCHHHHHHHHHHHHHHHhhhc
Q 013008 109 VNALGHGDADWIKAVVDQANVLTHVSN------MYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHS 182 (451)
Q Consensus 109 ~~~lG~~~p~v~~a~~~~~~~~~~~~~------~~~~~~~~~l~~~l~~~~~~e~v~~~~sG~eA~~~al~~a~~~~~~~ 182 (451)
-.-+|..++.+.+|+.+........+. ....+...++++.++++++.+.+++++|+++|+..+++.+.
T Consensus 26 ~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lA~~~g~~~~~~~~g~t~a~~~al~~l~------ 99 (387)
T PRK09331 26 IQRGGILTPEARKALIEYGDGYSVCDYCPGRLDQIKKPPIADFHEDLAEFLGMDEARVTHGAREGKFAVMHSLC------ 99 (387)
T ss_pred hhcCCCCCHHHHHHHHHHHhccCCCcccccccccccChHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhc------
Confidence 345788899999999988754322111 11234578999999999998899999999999999998764
Q ss_pred CCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeC-------CCHHHHHHhcCC------CCeEE
Q 013008 183 NPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEY-------GNIEATRKLIQP------GKTAA 249 (451)
Q Consensus 183 ~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~le~~l~~------~~~aa 249 (451)
.++++|++.++++.+.. .++...+.. +..++. .|++++++.++. .++++
T Consensus 100 -----~~gd~Vlv~~~~h~s~~-~~~~~~G~~------------~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~l 161 (387)
T PRK09331 100 -----KKGDYVVLDGLAHYTSY-VAAERAGLN------------VREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPAL 161 (387)
T ss_pred -----CCCCEEEECCCchHHHH-HHHHHcCCE------------EEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEE
Confidence 15788888776654433 222322221 112221 378999998863 26788
Q ss_pred EEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccccccCCCcceeeecccccCCccccccccc
Q 013008 250 VFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAALVT 329 (451)
Q Consensus 250 vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~t~sK~lg~G~~iG~v~~~ 329 (451)
|+++.++++.|.+.+ +++|.++|++||+++|+|++|+ +|..+ +....+++...+.+++|+++++.++|+++++
T Consensus 162 V~l~~~~~~tG~~~~----l~~I~~la~~~g~~livD~a~~-~g~~~--~~~~~~g~D~~~~s~~K~l~~~~~~G~l~~~ 234 (387)
T PRK09331 162 ALLTHVDGNYGNLAD----AKKVAKVAHEYGIPFLLNGAYT-VGRMP--VDGKKLGADFIVGSGHKSMAASAPSGVLATT 234 (387)
T ss_pred EEEECCCCCCccccc----HHHHHHHHHHcCCEEEEECCcc-cCCcC--CCHHHcCCCEEEeeCcccccCCCCEEEEEEC
Confidence 888888888888777 9999999999999999999995 43222 1222345444455778999877789999999
Q ss_pred HHHHhhccCCCccC------CCC--CcHHHHHHHHHHHHHhcC-hHHHHH----------HHhCCCCccee---ccccee
Q 013008 330 EKVASAINYGDHGS------TFA--GSPLVCNAAIAVLDKISN-PAFLAS----------KLARNPHVKDV---RGLGLI 387 (451)
Q Consensus 330 ~~i~~~~~~~~~~~------t~~--~~~~~~aaa~aal~~~~~-~~~~~~----------~~~~~~~~~~v---~g~G~~ 387 (451)
+++++.+....... .++ .++...++++++++.+.+ .+.+++ .+++++.+..+ .....+
T Consensus 235 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aal~~~~~~~~~~~~~~~~~~~l~~~L~~l~g~~~~~~~~~~~~i 314 (387)
T PRK09331 235 EEYADKVFRTSRKFGVKEVELLGCTLRGAPLVTLMASFPHVVERVKRWDEEVKKARWFVDELEKIEGFKQLGEKPRNHDL 314 (387)
T ss_pred HHHHhhcccccCCCcccceeeeceecCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeccCcCcCCe
Confidence 99888764321100 011 122233444455543321 111111 23344333222 122333
Q ss_pred EEEEec----------CChHHHHHHHHHCCceeeecCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHh
Q 013008 388 IGIEFD----------VSATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTLPVLD 447 (451)
Q Consensus 388 ~~~~~~----------~~~~~~~~~l~~~Gv~~~~~~~~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~~ 447 (451)
..++.. ..+..+.+.|.++||...+.+.+..+|+. +..++++++++++++|+++++++.
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~~~~~~~~~i~ri~-~~g~t~~di~~l~~aL~~i~~~~~ 383 (387)
T PRK09331 315 MKFETPSFDEIAKKHKRRGFFLYEELKKRGIHGIKPGATKEFKLS-TYGLTWEQVEYVADAFKEIAEKYG 383 (387)
T ss_pred EEEeCCchhHHhhhccccchhHHHHHHHcCceEEccCCceEEEEE-eccCCHHHHHHHHHHHHHHHHhcC
Confidence 334321 12356889999999985544443455665 456899999999999999887653
No 220
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.85 E-value=5.7e-19 Score=176.63 Aligned_cols=315 Identities=17% Similarity=0.146 Sum_probs=192.3
Q ss_pred EEeeccCcccccCCCCCHHHHHHHHHHHhhcccccCCCC------CHHHHHHHHHHhhccC--CCeEEecCCHHHHHHHH
Q 013008 100 YLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYY------SIPQIELAKRLVACSF--ADRVFFSNTGTEANEAA 171 (451)
Q Consensus 100 ~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~------~~~~~~l~~~l~~~~~--~e~v~~~~sG~eA~~~a 171 (451)
|+|..+ .+..++.|.+++.+.+..........+ .....++.+++++.++ .++|+|++||++|+..+
T Consensus 2 yld~aa------~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~i~~t~~~t~a~~~a 75 (379)
T TIGR03402 2 YLDNNA------TTRVDPEVLEAMLPYFTEYFGNPSSMHSFGGEVGKAVEEAREQVAKLLGAEPDEIIFTSGGTESDNTA 75 (379)
T ss_pred cCCCcC------CCCCCHHHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHH
Confidence 566554 334778999999988765311111111 1225577788888887 56899999999999999
Q ss_pred HHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhc--cCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEE
Q 013008 172 IKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALAL--TSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAA 249 (451)
Q Consensus 172 l~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aa 249 (451)
++.+..... +++.||+....|+........+ .+.... ..+...+. .-|++++++.+++ ++++
T Consensus 76 l~~~~~~~~--------~~~~vv~~~~~~~s~~~~~~~~~~~G~~v~---~v~~~~~g----~~~~~~l~~~i~~-~~~l 139 (379)
T TIGR03402 76 IKSALAAQP--------EKRHIITTAVEHPAVLSLCQHLEKQGYKVT---YLPVDEEG----RLDLEELRAAITD-DTAL 139 (379)
T ss_pred HHHHHHhcC--------CCCeEEEcccccHHHHHHHHHHHHcCCEEE---EEccCCCC----cCCHHHHHHhcCC-CcEE
Confidence 987653211 3556666665554432211111 111100 01111111 0278999999965 5677
Q ss_pred EEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccccccCCCcceeeec--ccccCCccccccc
Q 013008 250 VFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLA--KPLAGGLPIGAAL 327 (451)
Q Consensus 250 vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~t~s--K~lg~G~~iG~v~ 327 (451)
|++..+++++|.+.+ +++|.++|++||+++|+|++|+ +|.. ..+.....+|++++| | +.|...+|++.
T Consensus 140 v~i~~~~n~tG~~~~----~~~I~~l~~~~g~~vivD~~~~-~g~~----~~~~~~~~~D~~~~s~~K-~~gp~G~g~l~ 209 (379)
T TIGR03402 140 VSVMWANNETGTIFP----IEEIGEIAKERGALFHTDAVQA-VGKI----PIDLKEMNIDMLSLSGHK-LHGPKGVGALY 209 (379)
T ss_pred EEEEcccCCeeeccc----HHHHHHHHHHcCCEEEEECccc-cccc----ccCcccCCCCEEEEcHHH-cCCCCceEEEE
Confidence 877777778888777 8899999999999999999996 4321 122234568999988 9 54434577777
Q ss_pred ccHHHHhhccCCCc-------cCCCCCcHHHHHHHHHHHHHhcCh--HHHHH-----------HHhCCCCcceecc---c
Q 013008 328 VTEKVASAINYGDH-------GSTFAGSPLVCNAAIAVLDKISNP--AFLAS-----------KLARNPHVKDVRG---L 384 (451)
Q Consensus 328 ~~~~i~~~~~~~~~-------~~t~~~~~~~~aaa~aal~~~~~~--~~~~~-----------~~~~~~~~~~v~g---~ 384 (451)
.+++.. +.+... ....+.|..+..+..++++.+.+. ...++ +.+.++.+..... .
T Consensus 210 v~~~~~--~~p~~~g~~~~~~~~~gt~~~~~~~~l~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~ 287 (379)
T TIGR03402 210 IRKGTR--FRPLLRGGHQERGRRAGTENVPGIVGLGKAAELATEHLEEENTRVRALRDRLEAGLLARIPDARLNGDPTKR 287 (379)
T ss_pred ECCCCC--CCCcccCCccCCCcCCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEeCCCccC
Confidence 776531 222111 011223555566666667654321 11111 1222443321111 1
Q ss_pred -ceeEEEEe-cCChHHHHHHHHHCCceeeecCC----------------------CCEEEEeCCCCCCHHHHHHHHHHHH
Q 013008 385 -GLIIGIEF-DVSATPVVDACRDSGLLVLTAGK----------------------GNVVRLVPPLIISEQELDQAVEILC 440 (451)
Q Consensus 385 -G~~~~~~~-~~~~~~~~~~l~~~Gv~~~~~~~----------------------~~~iri~~~~~~t~e~i~~~l~~l~ 440 (451)
...+.+.+ .....++...|.++||.+.++.. .+.+|++++...|+||||++++.|+
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~l~~~gI~v~~g~~c~~~~~~~~~~~~~lg~~~~~~~~~vR~S~~~~~t~~di~~~~~~l~ 367 (379)
T TIGR03402 288 LPNTVNISFEYIEGEAILLLLDMEGICASSGSACTSGSLEPSHVLRAMGVPHTAAHGSIRFSLSRYNTEEDIDYVLEVLP 367 (379)
T ss_pred CCCEEEEEecCCCHHHHHHhhccCCEEEEchhhcCCCCCCcCHHHHHcCCChhhcCceEEEEcCCCCCHHHHHHHHHHHH
Confidence 11233333 24567888888889999875420 2579999999999999999999999
Q ss_pred HHHHHHhh
Q 013008 441 KTLPVLDS 448 (451)
Q Consensus 441 ~~l~~~~~ 448 (451)
+++++++.
T Consensus 368 ~~~~~~~~ 375 (379)
T TIGR03402 368 PIIARLRA 375 (379)
T ss_pred HHHHHHHh
Confidence 99887653
No 221
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.84 E-value=2.1e-18 Score=174.02 Aligned_cols=314 Identities=15% Similarity=0.070 Sum_probs=201.3
Q ss_pred CCEEEeeccCcccccCCCCCHHHHHHHHHHHhhccccc-CCCC------CHHHHHHHHHHhhccC---CCeEEecCCHHH
Q 013008 97 GREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVS-NMYY------SIPQIELAKRLVACSF---ADRVFFSNTGTE 166 (451)
Q Consensus 97 G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~-~~~~------~~~~~~l~~~l~~~~~---~e~v~~~~sG~e 166 (451)
+.-|+|..+. |..++.+.+++.+.+....... ...+ .....++.+.++++++ .++|+|++|+++
T Consensus 23 ~~iYld~a~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~ 96 (406)
T PRK09295 23 PLAYLDSAAS------AQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFINARSAEELVFVRGTTE 96 (406)
T ss_pred ceEEEeCccc------ccCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHH
Confidence 4578987663 3477889999988886532111 1111 1225577788888886 468999999999
Q ss_pred HHHHHHHHHHH-HhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeC-----CCHHHHHH
Q 013008 167 ANEAAIKFARK-FQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEY-----GNIEATRK 240 (451)
Q Consensus 167 A~~~al~~a~~-~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~le~ 240 (451)
++..+++.... .. .++++||+.++.||............ ....+..++. .|+++|++
T Consensus 97 ~l~~~~~~~~~~~~--------~~gd~vl~~~~~~~s~~~~~~~~~~~---------~g~~v~~v~~~~~~~~d~~~l~~ 159 (406)
T PRK09295 97 GINLVANSWGNSNV--------RAGDNIIISEMEHHANIVPWQMLCAR---------VGAELRVIPLNPDGTLQLETLPA 159 (406)
T ss_pred HHHHHHHHhhhhcC--------CCcCEEEECcchhhHHHHHHHHHHHH---------cCcEEEEEecCCCCCCCHHHHHH
Confidence 99998875421 11 15789999998887643221111000 0011122221 27899999
Q ss_pred hcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccccccCCCcceeeec--cccc
Q 013008 241 LIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLA--KPLA 318 (451)
Q Consensus 241 ~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~t~s--K~lg 318 (451)
++.+ ++++|++..+++++|.+.+ +++|.++|+++|+++|+|++|+ +|... .... ...+|++++| |.+|
T Consensus 160 ~i~~-~t~lv~l~~~~n~tG~~~~----~~~i~~~~~~~~~~vivD~a~~-~g~~~--~~~~--~~~~D~~~~s~~K~~g 229 (406)
T PRK09295 160 LFDE-RTRLLAITHVSNVLGTENP----LAEMIALAHQHGAKVLVDGAQA-VMHHP--VDVQ--ALDCDFYVFSGHKLYG 229 (406)
T ss_pred hcCC-CcEEEEEecchhcccccCC----HHHHHHHHHHcCCEEEEEcccc-cCccc--cCch--hcCCCEEEeehhhccC
Confidence 9865 5677777777777888877 8999999999999999999995 43321 1222 2346777665 9665
Q ss_pred CCcccccccccHHHHhhccCCCcc----------------------CCCCCcHHHHHHHHHHHHHhcChH---HHHH---
Q 013008 319 GGLPIGAALVTEKVASAINYGDHG----------------------STFAGSPLVCNAAIAVLDKISNPA---FLAS--- 370 (451)
Q Consensus 319 ~G~~iG~v~~~~~i~~~~~~~~~~----------------------~t~~~~~~~~aaa~aal~~~~~~~---~~~~--- 370 (451)
. ..+|++++++++++.+.+...+ .+-+.|..+..+..++++.+.+.+ ..++
T Consensus 230 p-~G~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~ 308 (406)
T PRK09295 230 P-TGIGILYVKEALLQEMPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSALGLNNIAEYEQN 308 (406)
T ss_pred C-CCcEEEEEchHhHhhCCCcccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence 3 2478999999887765431100 001345667778888888764422 2122
Q ss_pred ----H---HhCCCCcceec--ccceeEEEEec-CChHHHHHHHHHCCceeeecC-----------CCCEEEEeCCCCCCH
Q 013008 371 ----K---LARNPHVKDVR--GLGLIIGIEFD-VSATPVVDACRDSGLLVLTAG-----------KGNVVRLVPPLIISE 429 (451)
Q Consensus 371 ----~---~~~~~~~~~v~--g~G~~~~~~~~-~~~~~~~~~l~~~Gv~~~~~~-----------~~~~iri~~~~~~t~ 429 (451)
+ ++.++.+..+. ..+.++.+.++ ....++.+.|.++||.+..+. .++.+|+++..-.|+
T Consensus 309 l~~~l~~~l~~~~~~~~~~~~~~~~iv~~~~~~~~~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~~~~~iRiS~~~ynt~ 388 (406)
T PRK09295 309 LMHYALSQLESVPDLTLYGPQNRLGVIAFNLGKHHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTH 388 (406)
T ss_pred HHHHHHHHHhcCCCEEEeCCCCCceEEEEEECCcCHHHHHHHHHhCCeEEeccccchHHHHHHHCCCCEEEEEccCCCCH
Confidence 2 22344332221 12345566553 356778888888999887542 125799999999999
Q ss_pred HHHHHHHHHHHHHHH
Q 013008 430 QELDQAVEILCKTLP 444 (451)
Q Consensus 430 e~i~~~l~~l~~~l~ 444 (451)
||||++++.|+++..
T Consensus 389 ~did~l~~~l~~i~~ 403 (406)
T PRK09295 389 EEVDRLVAGLQRIHR 403 (406)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999988653
No 222
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.84 E-value=1.3e-18 Score=175.10 Aligned_cols=310 Identities=16% Similarity=0.103 Sum_probs=193.8
Q ss_pred CEEEeeccCcccccCCCCCHHHHHHHHHHHhhccccc-CCCC-----CHHHHHHHHHHhhccC--CCeEEecCCHHHHHH
Q 013008 98 REYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVS-NMYY-----SIPQIELAKRLVACSF--ADRVFFSNTGTEANE 169 (451)
Q Consensus 98 ~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~-~~~~-----~~~~~~l~~~l~~~~~--~e~v~~~~sG~eA~~ 169 (451)
..|+|..+ .|..++.+.+++.+.+......+ ..+. .....++.+.++++++ .+.+++++|+++++.
T Consensus 18 ~~yl~~~~------~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~~~~~~~v~~~~~~t~~l~ 91 (397)
T TIGR01976 18 RVFFDNPA------GTQIPQSVADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLLNADPPEVVFGANATSLTF 91 (397)
T ss_pred eEEecCCc------cCCCCHHHHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHcCCCCCeEEEeCCHHHHHH
Confidence 47888654 34578899999999886542211 1111 1225788899999887 447999999999988
Q ss_pred HHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhh---hhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCC
Q 013008 170 AAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGA---LALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGK 246 (451)
Q Consensus 170 ~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~ 246 (451)
.++++.....+ ++++||+.++.|++..... ....|..... .+..++.. ..|++++++.+.+ +
T Consensus 92 ~~~~~~~~~~~--------~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~---~~~~~~~~---~~~~~~l~~~i~~-~ 156 (397)
T TIGR01976 92 LLSRAISRRWG--------PGDEVIVTRLDHEANISPWLQAAERAGAKVKW---ARVDEATG---ELHPDDLASLLSP-R 156 (397)
T ss_pred HHHHHHHhcCC--------CCCEEEEcCCchHhHHHHHHHHHHhcCCEEEE---EeccccCC---CcCHHHHHHhcCC-C
Confidence 87775532221 5789999988776543221 1112211110 11111000 1278999999965 5
Q ss_pred eEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccccccCCCccee--eecccccCCcccc
Q 013008 247 TAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIM--TLAKPLAGGLPIG 324 (451)
Q Consensus 247 ~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~--t~sK~lg~G~~iG 324 (451)
+++|+++.+++++|.+.+ +++|.++|++||+++|+||+|. .|. . ..... ...+|++ +++|.+ |.++|
T Consensus 157 ~~lv~i~~~~n~tG~~~~----~~~i~~~~~~~~~~~ivD~a~~-~~~-~-~~~~~--~~~~d~~~~s~~K~~--g~~~G 225 (397)
T TIGR01976 157 TRLVAVTAASNTLGSIVD----LAAITELVHAAGALVVVDAVHY-APH-G-LIDVQ--ATGADFLTCSAYKFF--GPHMG 225 (397)
T ss_pred ceEEEEeCCCCCCCccCC----HHHHHHHHHHcCCEEEEehhhh-ccc-c-CCCHH--HcCCCEEEEechhhc--CCceE
Confidence 677777777777887776 9999999999999999999985 321 1 11122 2346765 567887 45789
Q ss_pred cccccHHHHhhccCCCccCCC----------CCcHHHHHHHHHHHHHhcChH-----------------HHHH-------
Q 013008 325 AALVTEKVASAINYGDHGSTF----------AGSPLVCNAAIAVLDKISNPA-----------------FLAS------- 370 (451)
Q Consensus 325 ~v~~~~~i~~~~~~~~~~~t~----------~~~~~~~aaa~aal~~~~~~~-----------------~~~~------- 370 (451)
++++++++++.+.+......+ +.+....++..++++.+.+.+ ..++
T Consensus 226 ~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 305 (397)
T TIGR01976 226 ILWGRPELLMNLPPYKLTFSYDTGPERFELGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQAIDAYENRLAEY 305 (397)
T ss_pred EEEEcHHHHhhCCCccccCccCCCcchhcCCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHHHHHHHHHHHHHH
Confidence 999999988877543211111 123344555556666543211 0111
Q ss_pred HH---hCCCCcceecc-----cceeEEEEec-CChHHHHHHHHHCCceeeecC--------------CCCEEEEeCCCCC
Q 013008 371 KL---ARNPHVKDVRG-----LGLIIGIEFD-VSATPVVDACRDSGLLVLTAG--------------KGNVVRLVPPLII 427 (451)
Q Consensus 371 ~~---~~~~~~~~v~g-----~G~~~~~~~~-~~~~~~~~~l~~~Gv~~~~~~--------------~~~~iri~~~~~~ 427 (451)
+. +.++.+..+.+ .+.++.+.+. ....++.++|.++||.+..+. .+..+|+++...+
T Consensus 306 l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~ 385 (397)
T TIGR01976 306 LLVGLSDLPGVTLYGVARLAARVPTVSFTVHGLPPQRVVRRLADQGIDAWAGHFYAVRLLRRLGLNDEGGVVRVGLAHYN 385 (397)
T ss_pred HHHHHhcCCCEEEeCCCCccCCCceEEEEeCCcCHHHHHHHHHHCCeEEEeCccchHHHHHHhCCCCCCCeEEEEeeccC
Confidence 22 23332322211 3445555553 456789999999999998651 1357999999999
Q ss_pred CHHHHHHHHHHH
Q 013008 428 SEQELDQAVEIL 439 (451)
Q Consensus 428 t~e~i~~~l~~l 439 (451)
|++|++++++.|
T Consensus 386 t~~di~~l~~~l 397 (397)
T TIGR01976 386 TAEEVDRLLEAL 397 (397)
T ss_pred CHHHHHHHHHhC
Confidence 999999998864
No 223
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.84 E-value=4.3e-19 Score=175.96 Aligned_cols=300 Identities=17% Similarity=0.102 Sum_probs=188.2
Q ss_pred CCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHhhccCC---CeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCc
Q 013008 115 GDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFA---DRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPAT 191 (451)
Q Consensus 115 ~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~---e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~ 191 (451)
.++.+.+|+.+.+.. +.+ ........++++.+++.++. +.+++++||++|+..+++... .+++
T Consensus 10 ~~~~v~~a~~~~~~~--~~~-~~~~~~~~~~~~~la~~~g~~~~~~~~~~~~~t~al~~~~~~~~-----------~~g~ 75 (356)
T cd06451 10 VPPRVLKAMNRPMLG--HRS-PEFLALMDEILEGLRYVFQTENGLTFLLSGSGTGAMEAALSNLL-----------EPGD 75 (356)
T ss_pred CCHHHHHHhCCCccC--CCC-HHHHHHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHHHHHHhC-----------CCCC
Confidence 567787777543321 110 01122366888889998873 347899999999999998654 1578
Q ss_pred eEEEEcCCccCCh-hhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHH
Q 013008 192 EFVSFTNSFHGRT-MGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQ 270 (451)
Q Consensus 192 ~ii~~~~~yhg~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~ 270 (451)
.||+.+++|++.. .......+..... .+..++ ...|++++++.++++++++|++..++++.|.+.+ ++
T Consensus 76 ~vl~~~~~~~~~~~~~~~~~~g~~~~~---v~~~~~----~~~~~~~l~~~i~~~~~~~v~i~~~~~~~G~~~~----~~ 144 (356)
T cd06451 76 KVLVGVNGVFGDRWADMAERYGADVDV---VEKPWG----EAVSPEEIAEALEQHDIKAVTLTHNETSTGVLNP----LE 144 (356)
T ss_pred EEEEecCCchhHHHHHHHHHhCCCeEE---eecCCC----CCCCHHHHHHHHhccCCCEEEEeccCCCcccccC----HH
Confidence 8999988776532 1222222211111 111111 0237899999997546677776666666787766 89
Q ss_pred HHHHHHHHhCCEEEEeccccCCCcccccccccccCCCcceee--ecccccCCcccccccccHHHHhhccC--CCc-----
Q 013008 271 FLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMT--LAKPLAGGLPIGAALVTEKVASAINY--GDH----- 341 (451)
Q Consensus 271 ~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~t--~sK~lg~G~~iG~v~~~~~i~~~~~~--~~~----- 341 (451)
+|.++|++||+++|+|++|. +|.. ......+ .+|+++ .+|.++++.++|+++.++++++.+.. ...
T Consensus 145 ~i~~~a~~~~~~li~D~~~~-~g~~--~~~~~~~--~~d~~~~s~~K~l~~p~g~G~l~~~~~~~~~~~~~~~~~~~~~~ 219 (356)
T cd06451 145 GIGALAKKHDALLIVDAVSS-LGGE--PFRMDEW--GVDVAYTGSQKALGAPPGLGPIAFSERALERIKKKTKPKGFYFD 219 (356)
T ss_pred HHHHHHHhcCCEEEEeeehh-ccCc--ccccccc--CccEEEecCchhccCCCCcceeEECHHHHHHHHhcCCCCceeec
Confidence 99999999999999999985 5422 1222222 356554 46999876678999999988877642 110
Q ss_pred ------------cCCCCCcHHHHHHHHHHHHHhcChHH---HHH----------HHhCCC--Ccceecc-cceeEEEEec
Q 013008 342 ------------GSTFAGSPLVCNAAIAVLDKISNPAF---LAS----------KLARNP--HVKDVRG-LGLIIGIEFD 393 (451)
Q Consensus 342 ------------~~t~~~~~~~~aaa~aal~~~~~~~~---~~~----------~~~~~~--~~~~v~g-~G~~~~~~~~ 393 (451)
..+.+.++..++++.++++.+....+ .++ .++... ......+ .+.+.++.++
T Consensus 220 ~~~~~~~~~~~~~~~~t~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~ 299 (356)
T cd06451 220 LLLLLKYWGEGYSYPHTPPVNLLYALREALDLILEEGLENRWARHRRLAKALREGLEALGLKLLAKPELRSPTVTAVLVP 299 (356)
T ss_pred HHHHHhhhcccCCCCCCChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCeeccCcccCCCceEEEECC
Confidence 11122345556677777776543321 111 112221 1111111 2333344443
Q ss_pred --CChHHHHHHHHHC-CceeeecC---CCCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q 013008 394 --VSATPVVDACRDS-GLLVLTAG---KGNVVRLVPPLIISEQELDQAVEILCKTLP 444 (451)
Q Consensus 394 --~~~~~~~~~l~~~-Gv~~~~~~---~~~~iri~~~~~~t~e~i~~~l~~l~~~l~ 444 (451)
....++++.|.++ ||.+.++. .++.+|++++..+|+||+++++++|+++++
T Consensus 300 ~~~~~~~~~~~L~~~~gI~~~~g~~~~~~~~iRis~~~~~~~e~v~~~~~~l~~~~~ 356 (356)
T cd06451 300 EGVDGDEVVRRLMKRYNIEIAGGLGPTAGKVFRIGHMGEATREDVLGVLSALEEALK 356 (356)
T ss_pred CCCCHHHHHHHHHHhCCEEEecccccccCCEEEEecCCCCCHHHHHHHHHHHHHHhC
Confidence 3467899999998 99998753 236899999999999999999999998763
No 224
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.84 E-value=7.7e-19 Score=173.91 Aligned_cols=299 Identities=14% Similarity=0.142 Sum_probs=188.7
Q ss_pred CCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHhhccCC----CeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCC
Q 013008 115 GDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFA----DRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPA 190 (451)
Q Consensus 115 ~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~----e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~ 190 (451)
.+|.+.+++.... .+....+ .+...++.+.+++.++. ..+++++||++++..+++.+.. ++
T Consensus 10 ~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~la~~~~~~~~~~~i~~~~~gt~~l~~~~~~~~~-----------~~ 74 (355)
T TIGR03301 10 TSATVRDAMLVDW---CHWDSEF-NDVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGSLVP-----------RD 74 (355)
T ss_pred CCHHHHHHhhhhc---cCCCHHH-HHHHHHHHHHHHHHhcCCCCCcEEEEeCCcHHHHHHHHHhccC-----------CC
Confidence 4577777776622 2211111 24577888999998873 2678899999999999987651 46
Q ss_pred ceEEEEcCCccCChhhh-hhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCC-CCeEEEEEccccCCCCccccCHHH
Q 013008 191 TEFVSFTNSFHGRTMGA-LALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQP-GKTAAVFVEPIQGEGGIYSATKEF 268 (451)
Q Consensus 191 ~~ii~~~~~yhg~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~-~~~aavi~ep~~~~~G~~~~~~~~ 268 (451)
+++|+.++++++..... ....+..... .+...+. ..|++++++.+.. .++..|++..+++.+|...+
T Consensus 75 ~~vi~~~~~~~~~~~~~~a~~~g~~~~~---i~~~~~~----~~d~~~l~~~l~~~~~~~~v~~~~~~~~~G~~~~---- 143 (355)
T TIGR03301 75 GKLLVLINGAYGERLAKICEYLGIPHTD---LNFSEYE----PPDLNRIEEALAADPDITHVATVHHETTTGILNP---- 143 (355)
T ss_pred CeEEEECCCchhhHHHHHHHHcCCceEE---EecCCCC----CCCHHHHHHHHHhCCCceEEEEEecCCcccchhH----
Confidence 78888888877753221 1111211110 0111110 1278999999863 24445544434455676665
Q ss_pred HHHHHHHHHHhCCEEEEeccccCCCcccccccccccCCCcceeeecccccCCcccccccccHHHHhhccCCC--------
Q 013008 269 LQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINYGD-------- 340 (451)
Q Consensus 269 l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~t~sK~lg~G~~iG~v~~~~~i~~~~~~~~-------- 340 (451)
+++|.++|++||+++|+|++++ +|.. .+....+++..-+.+++|+++++..+|++++++++++.+....
T Consensus 144 ~~~i~~l~~~~~~~livD~~~s-~g~~--~~~~~~~~~d~~~~s~~K~l~~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~ 220 (355)
T TIGR03301 144 LEAIAKVARSHGAVLIVDAMSS-FGAI--PIDIEELDVDALIASANKCLEGVPGFGFVIARRDLLEASAGNARSLYLDLY 220 (355)
T ss_pred HHHHHHHHHHcCCEEEEEeccc-cCCc--ccchhhcCccEEEecCCcccccCCceeEEEECHHHHHHhhCCCCCceeeHH
Confidence 8999999999999999999885 5422 2233334433334578899876555799999999888765210
Q ss_pred ---------ccCCCCCcHHHHHHHHHHHHHhcChH-H---HHH----------HHhCCCCccee----cccceeEEEEec
Q 013008 341 ---------HGSTFAGSPLVCNAAIAVLDKISNPA-F---LAS----------KLARNPHVKDV----RGLGLIIGIEFD 393 (451)
Q Consensus 341 ---------~~~t~~~~~~~~aaa~aal~~~~~~~-~---~~~----------~~~~~~~~~~v----~g~G~~~~~~~~ 393 (451)
....++.+++.+.++.++++.+.+++ + .++ .+++++ +..+ ...+.++++.+.
T Consensus 221 ~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~g-~~~~~~~~~~~~~~~~~~~~ 299 (355)
T TIGR03301 221 DQWAYMEKTGKWRFTPPTHTVYAFAQALEELEAEGGVPARIARYRRNRELLVDGLRALG-FQPLLPERWQSPIIVSFLYP 299 (355)
T ss_pred HHHHHhhhcCCCCCCCcHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcC-CeeecCCCCCCCcEEEEECC
Confidence 01234567777777778887664332 1 111 222332 1111 123455666653
Q ss_pred ----CChHHHHHHHHHCCceeeecCC--CCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 013008 394 ----VSATPVVDACRDSGLLVLTAGK--GNVVRLVPPLIISEQELDQAVEILCKTL 443 (451)
Q Consensus 394 ----~~~~~~~~~l~~~Gv~~~~~~~--~~~iri~~~~~~t~e~i~~~l~~l~~~l 443 (451)
....++.+.|.++||.+.+++. .+.+||++...+++++++++++.|++++
T Consensus 300 ~~~~~~~~~~~~~l~~~gi~i~~~~~~~~~~iRis~~~~~~~~~i~~~~~~l~~~~ 355 (355)
T TIGR03301 300 DDPDFDFDDFYQELKERGFVIYPGKLTLADTFRIGTIGEIDAADIERLLEAIKDAL 355 (355)
T ss_pred CCCcchHHHHHHHHHHCCEEEECCccccccEEEEecCCCCCHHHHHHHHHHHHhhC
Confidence 2346899999999999988742 2679999877889999999999998753
No 225
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.83 E-value=4.4e-18 Score=171.62 Aligned_cols=316 Identities=16% Similarity=0.114 Sum_probs=199.3
Q ss_pred EEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccCC-CC------CHHHHHHHHHHhhccC---CCeEEecCCHHHHH
Q 013008 99 EYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNM-YY------SIPQIELAKRLVACSF---ADRVFFSNTGTEAN 168 (451)
Q Consensus 99 ~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~-~~------~~~~~~l~~~l~~~~~---~e~v~~~~sG~eA~ 168 (451)
-|+|..+ .|..++.+.+++.+.++........ .+ .....++.+.++++++ .+.+++++|+++++
T Consensus 20 ~yld~~~------~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~~~~~~~~v~~~~g~t~~l 93 (403)
T TIGR01979 20 VYLDSAA------TSQKPQQVIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFINAASDEEIVFTRGTTESI 93 (403)
T ss_pred EEEeCcc------ccCCCHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHH
Confidence 6888554 4557788999998877653211111 11 1125577788888887 35899999999999
Q ss_pred HHHHHHHHH-HhhhcCCCCCCCCceEEEEcCCccCChhhhhh---ccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCC
Q 013008 169 EAAIKFARK-FQRHSNPDSKEPATEFVSFTNSFHGRTMGALA---LTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQP 244 (451)
Q Consensus 169 ~~al~~a~~-~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~ 244 (451)
..+++.+.. .. .+++.||+.++.|+........ ..+.... ..+...+.. -|++++++.+.+
T Consensus 94 ~~~~~~~~~~~~--------~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~---~v~~~~~~~----~~~~~l~~~i~~ 158 (403)
T TIGR01979 94 NLVAYSWGDSNL--------KAGDEIVISEMEHHANIVPWQLLAERTGATLK---FIPLDDDGT----LDLDDLEKLLTE 158 (403)
T ss_pred HHHHHHhhhhcC--------CCCCEEEECcchhhHHHHHHHHHHHhcCcEEE---EEecCCCCC----CCHHHHHHHhcc
Confidence 988876531 11 1578899988887654322111 1111100 011111100 278999999864
Q ss_pred CCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccccccCCCccee--eecccccCCcc
Q 013008 245 GKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIM--TLAKPLAGGLP 322 (451)
Q Consensus 245 ~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~--t~sK~lg~G~~ 322 (451)
++++|++..+++.+|.+.+ +++|.++|++||+++|+|++|. +|.. ..... ...+|++ +++|.+|. ..
T Consensus 159 -~~~lv~~~~~~~~tG~~~~----~~~i~~~~~~~~~~~ivD~a~~-~g~~--~~~~~--~~~~d~~~~s~~K~~gp-~G 227 (403)
T TIGR01979 159 -KTKLVAITHVSNVLGTVNP----VEEIAKLAHQVGAKVLVDGAQA-VPHM--PVDVQ--ALDCDFYVFSGHKMYGP-TG 227 (403)
T ss_pred -CCeEEEEEcccccccccCC----HHHHHHHHHHcCCEEEEEchhh-cCcc--ccCcc--ccCCCEEEEecccccCC-CC
Confidence 5777777777777888777 9999999999999999999995 3321 11122 2346766 45697753 34
Q ss_pred cccccccHHHHhhccCCCccC-----------C-------C---CCcHHHHHHHHHHHHHhcCh---HHHHH--------
Q 013008 323 IGAALVTEKVASAINYGDHGS-----------T-------F---AGSPLVCNAAIAVLDKISNP---AFLAS-------- 370 (451)
Q Consensus 323 iG~v~~~~~i~~~~~~~~~~~-----------t-------~---~~~~~~~aaa~aal~~~~~~---~~~~~-------- 370 (451)
+|++++++++++.+.+...++ . | +.+...++++.++++.+.+. .+.++
T Consensus 228 ~g~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~g~~~~~~~~~~l~~~l 307 (403)
T TIGR01979 228 IGVLYGKEELLEQMPPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEAIGLENIEAHEHELTAYA 307 (403)
T ss_pred ceEEEEchHHHhcCCCeecCCCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 788888988877664321100 0 1 23455566666777765432 22222
Q ss_pred --HHhCCCCcceecc-----cceeEEEEec-CChHHHHHHHHHCCceeeecC-----------CCCEEEEeCCCCCCHHH
Q 013008 371 --KLARNPHVKDVRG-----LGLIIGIEFD-VSATPVVDACRDSGLLVLTAG-----------KGNVVRLVPPLIISEQE 431 (451)
Q Consensus 371 --~~~~~~~~~~v~g-----~G~~~~~~~~-~~~~~~~~~l~~~Gv~~~~~~-----------~~~~iri~~~~~~t~e~ 431 (451)
.++.++.+..+.+ .+.++.+.+. ....++.+.|.++||.+.++. .++.+|++++...|++|
T Consensus 308 ~~~l~~~~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~iRiS~~~~~t~~d 387 (403)
T TIGR01979 308 LERLGEIPGLRIYGPRDAEDRGGIISFNVEGVHPHDVGTILDEEGIAVRSGHHCAQPLMRRFGVPATCRASFYIYNTEED 387 (403)
T ss_pred HHHHhcCCCEEEeCCCCccccCceEEEEeCCcCHHHHHHHHhhCCEEEcchhhhhHHHHHHhCCCCEEEEEeccCCCHHH
Confidence 2233443332222 2556667663 346778888889999887532 13579999998899999
Q ss_pred HHHHHHHHHHHHHHH
Q 013008 432 LDQAVEILCKTLPVL 446 (451)
Q Consensus 432 i~~~l~~l~~~l~~~ 446 (451)
++++++.|+++++.+
T Consensus 388 i~~l~~~l~~~~~~~ 402 (403)
T TIGR01979 388 IDALVEALKKVRKFF 402 (403)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999887754
No 226
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.83 E-value=1.7e-18 Score=171.94 Aligned_cols=306 Identities=13% Similarity=0.093 Sum_probs=186.5
Q ss_pred CCCCHHHHHHHHHHHhhcccccC-C-----CCCHHHHHHHHHHhhccCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCC
Q 013008 113 GHGDADWIKAVVDQANVLTHVSN-M-----YYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDS 186 (451)
Q Consensus 113 G~~~p~v~~a~~~~~~~~~~~~~-~-----~~~~~~~~l~~~l~~~~~~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~ 186 (451)
|+..|++.+++.+.-......+. . ...+...++.+++++.++.+.+++++|+++|+..+++...
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~i~~~~g~t~al~~~l~~~~---------- 80 (361)
T cd06452 11 GRLTPEARKALIEWGDGYSVCDFCRGRLDEIEKPPIKDFHHDLAEFLGMDEARVTPGAREGKFAVMHSLC---------- 80 (361)
T ss_pred CCCCHHHHHHHHHHhcccCCccccccccccccCchHHHHHHHHHHHcCCceEEEeCCHHHHHHHHHHHhc----------
Confidence 56778888888876643222111 0 1224478999999999999999999999999999998654
Q ss_pred CCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCC------CCeEEEEEccccCCCC
Q 013008 187 KEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQP------GKTAAVFVEPIQGEGG 260 (451)
Q Consensus 187 ~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~------~~~aavi~ep~~~~~G 260 (451)
.++++|++.+++|.+... .....+..... .+...+-.+ .-|++++++++++ .++++|++...+++.|
T Consensus 81 -~~gd~Vl~~~~~~~~~~~-~~~~~g~~~~~---v~~~~~~~~--~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG 153 (361)
T cd06452 81 -EKGDWVVVDGLAHYTSYV-AAERAGLNVRE---VPNTGHPEY--HITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYG 153 (361)
T ss_pred -CCCCEEEEcCCcchHHHH-HHHhcCCEEEE---EecCCCCCc--ccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCe
Confidence 158889998877655432 22222211111 111111000 1278999888852 2567777776666677
Q ss_pred ccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccccccCCCcceeeecccccCCcccccccccHHHHhhccCCC
Q 013008 261 IYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINYGD 340 (451)
Q Consensus 261 ~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~t~sK~lg~G~~iG~v~~~~~i~~~~~~~~ 340 (451)
...+ +++|.++|++||+++|+||+|. +|.. .+....++....+.+++|+++++.++|++++++++++.+....
T Consensus 154 ~~~~----~~~i~~~~~~~~~~vivD~a~~-~g~~--~~~~~~~~~d~~~~s~~K~l~~~~~~G~l~~~~~~~~~l~~~~ 226 (361)
T cd06452 154 NLHD----AKKIAKVCHEYGVPLLLNGAYT-VGRM--PVSGKELGADFIVGSGHKSMAASAPIGVLATTEEWADIVFRTS 226 (361)
T ss_pred eecc----HHHHHHHHHHcCCeEEEECCcc-cCCc--CCCHHHcCCCEEEecCCccccCCCCeEEEEECHHHHHHHhccc
Confidence 6655 8999999999999999999996 4322 1222334443444578899987679999999999888875422
Q ss_pred cc------CCCCC--cHHHHHHHHHHHHHhcC--hH---------HHHHHHhCCCCccee---cccceeEEEEec-----
Q 013008 341 HG------STFAG--SPLVCNAAIAVLDKISN--PA---------FLASKLARNPHVKDV---RGLGLIIGIEFD----- 393 (451)
Q Consensus 341 ~~------~t~~~--~~~~~aaa~aal~~~~~--~~---------~~~~~~~~~~~~~~v---~g~G~~~~~~~~----- 393 (451)
.. ..+++ ++..++++.++++.+.+ +. .+.+.+++++.+..+ .+...++.++..
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~l~g~~v~~~~~~~~n~~~~~~~~~~~~ 306 (361)
T cd06452 227 QMFKIKEVELLGCTLRGAPLVTLMASFPHVKERVKRWDEEVEKARWFVAELEKIEGIKQLGEKPKNHDLMFFETPSFDEI 306 (361)
T ss_pred cccccceeeeeccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEECCCCCCCceEEEEcCCcchh
Confidence 11 10111 11223334444433211 01 111123444433222 123334444432
Q ss_pred -----CChHHHHHHHHHCCceeeecCCCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 013008 394 -----VSATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTL 443 (451)
Q Consensus 394 -----~~~~~~~~~l~~~Gv~~~~~~~~~~iri~~~~~~t~e~i~~~l~~l~~~l 443 (451)
....++.+.|+++||.....+.+..+|+.. ..+++|+++.++++|+++.
T Consensus 307 ~~~~~~~~~~~~~~L~~~gI~~~~~~~~~~~ri~~-~g~~~e~~~~l~~al~~~~ 360 (361)
T cd06452 307 AKKHKRRGYFLYSELKKRGIHGIKPGLTRYFKLST-YGLTWEQVEYVVDAFKEIA 360 (361)
T ss_pred hhhccccchhHHHHHHHcCceEEcCCCceEEEEEe-cCCCHHHHHHHHHHHHHHh
Confidence 112368899999999965444446788875 4479999999999998654
No 227
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.83 E-value=9.4e-18 Score=170.40 Aligned_cols=308 Identities=13% Similarity=0.050 Sum_probs=188.7
Q ss_pred HHHHHHHHHHhhcccccCCCCCHHHHHHHHHHhhccCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEc
Q 013008 118 DWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFT 197 (451)
Q Consensus 118 ~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~ 197 (451)
.+.+++.+++...... +.......+|.+.++++++.+.+++|+||++|+..+++++. +++| ||+.+
T Consensus 58 a~~~a~~~a~~~g~~~--Y~~~~g~~~Lreaia~~~~~~~vv~t~ggt~A~~~~~~all-----------~pGD-Vii~~ 123 (460)
T PRK13238 58 AMSDRQWAAMMRGDEA--YAGSRSYYRLEDAVKDIFGYPYTIPTHQGRAAEQILFPVLI-----------KKGD-VVPSN 123 (460)
T ss_pred hhhHHHHHHHHhCCcc--cCCCCCHHHHHHHHHHHhCCCcEEECCCHHHHHHHHHHHhC-----------CCCC-EEccC
Confidence 4777777777553321 22334477899999999998999999999999999988664 2678 99999
Q ss_pred CCccCChhhhhhccCCCCcCCCCcCCCCCe--e-EeeC---CCHHHHHHhcCC---CCeEEEEEccccCCCCccccCHHH
Q 013008 198 NSFHGRTMGALALTSKEHYRSPFEPVMPGV--N-FVEY---GNIEATRKLIQP---GKTAAVFVEPIQGEGGIYSATKEF 268 (451)
Q Consensus 198 ~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~---~d~~~le~~l~~---~~~aavi~ep~~~~~G~~~~~~~~ 268 (451)
|.|..+.......++..... +..+.. . .-++ -|++.|++.+.+ +++++|+++..++++|..+.+.+.
T Consensus 124 p~~~~~~~~i~~~G~~~v~v----~~~~~~~~~~~~~f~g~id~e~Le~~i~~~~~~~tk~Ivl~~p~NptGG~v~s~~~ 199 (460)
T PRK13238 124 YHFDTTRAHIELNGATAVDL----VIDEALDTGSRHPFKGNFDLEKLEALIEEVGAENVPFIVMTITNNSAGGQPVSMAN 199 (460)
T ss_pred CcccchHHHHHHcCCEEEEE----eccccccccccccccCCcCHHHHHHHHhhcCCCceeEEEEecCCCCCCCcCCCHHH
Confidence 88876543333333322211 111100 0 0011 289999999973 368888888766666656789999
Q ss_pred HHHHHHHHHHhCCEEEEeccccC----CCcc---cc-cccccc----cCCCcceeeec-ccccCCcc-ccccccc-HHHH
Q 013008 269 LQFLRDACDDAGALLVFDEVQCG----LGRT---GY-LWAHEH----YGIFPDIMTLA-KPLAGGLP-IGAALVT-EKVA 333 (451)
Q Consensus 269 l~~l~~l~~~~g~llI~DEv~tg----~gr~---G~-~~~~~~----~~~~pdi~t~s-K~lg~G~~-iG~v~~~-~~i~ 333 (451)
+++|+++|++||++||+|+++.. |+.. |. ...... .+--.|+.++| |-.+. .+ .|+++++ ++++
T Consensus 200 l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i~~~~~s~~D~~~~Sg~K~g~-~~~GG~i~~~d~~l~ 278 (460)
T PRK13238 200 LRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSIKEIAREMFSYADGLTMSAKKDAM-VNIGGLLCFRDEDLF 278 (460)
T ss_pred HHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCCCHHHHhhhhcccCcEEEEecccCCC-CcceeEEEcChHHHH
Confidence 99999999999999999997742 1100 10 000000 01125666665 11111 23 3566666 5788
Q ss_pred hhccCCC---c-cCCCCCcHHH-HHHHHHHHHHhcChHHHHH----------HHhCCCCcceec-ccceeEEEEecC---
Q 013008 334 SAINYGD---H-GSTFAGSPLV-CNAAIAVLDKISNPAFLAS----------KLARNPHVKDVR-GLGLIIGIEFDV--- 394 (451)
Q Consensus 334 ~~~~~~~---~-~~t~~~~~~~-~aaa~aal~~~~~~~~~~~----------~~~~~~~~~~v~-g~G~~~~~~~~~--- 394 (451)
+.++... + ..||++.+.. ++|...+|+...++++++. .+... .+..+. ..|.++.+++..
T Consensus 279 ~~~~~~~~~~~g~~t~~g~~~~~~~Ala~~l~e~~~~~~~~~~~~~~~~l~~~L~~~-G~~~~~p~Gg~~v~~d~~~~~~ 357 (460)
T PRK13238 279 TECRTLCILYEGFPTYGGLAGRDMEALAVGLYEGMDEDYLAYRIGQVEYLGEGLEEA-GVPIQTPAGGHAVFVDAGKFLP 357 (460)
T ss_pred HHhhhcccccCCcccccCcHHHHHHHHHhhHHHhhChHHHHHHHHHHHHHHHHHHHC-CCCeEccCCceEEEEEchhcCC
Confidence 8776442 3 3488886665 4444445553323333322 11221 222232 345565566521
Q ss_pred -------ChHHHHHHHH-HCCceeeecC-------C---------CCEEEEeCCC-CCCHHHHHHHHHHHHHHHHH
Q 013008 395 -------SATPVVDACR-DSGLLVLTAG-------K---------GNVVRLVPPL-IISEQELDQAVEILCKTLPV 445 (451)
Q Consensus 395 -------~~~~~~~~l~-~~Gv~~~~~~-------~---------~~~iri~~~~-~~t~e~i~~~l~~l~~~l~~ 445 (451)
...+++.+|+ +.||.+.|.+ . .+.+|+.++- ..|.++++.++++|.+..++
T Consensus 358 ~~~~~~~~~~~~a~~L~~e~GV~~~~~~~f~~~~~~~~~~~~~~~~~~~Rla~~rr~~~~~~~~~~~~~l~~~~~~ 433 (460)
T PRK13238 358 HIPAEQFPAQALACELYLEAGIRGVEIGSLLLGRDPKTGEQLPAPAELLRLAIPRRVYTQSHMDYVAEALKAVKEN 433 (460)
T ss_pred CCCCCCCchHHHHHHHHHHcCeeeecccceecccCCCCccccCCccceEEEecccccCCHHHHHHHHHHHHHHHHh
Confidence 3567888887 5699887753 0 2578998774 55999999999999987754
No 228
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.82 E-value=5.8e-18 Score=170.68 Aligned_cols=306 Identities=15% Similarity=0.101 Sum_probs=181.8
Q ss_pred CCHHHHHHHHHHH-hhcccccCC----CCCHHHHHHHH----HHhhccCCCeEE-ecCCHHHHHHHHHHHHHHHhhhcCC
Q 013008 115 GDADWIKAVVDQA-NVLTHVSNM----YYSIPQIELAK----RLVACSFADRVF-FSNTGTEANEAAIKFARKFQRHSNP 184 (451)
Q Consensus 115 ~~p~v~~a~~~~~-~~~~~~~~~----~~~~~~~~l~~----~l~~~~~~e~v~-~~~sG~eA~~~al~~a~~~~~~~~~ 184 (451)
-||.+++|+...+ .+++.++.+ ..++...+|++ +++++++.+.++ +++||+.|+.+++.++.
T Consensus 40 ~~p~v~~a~~~~~~~~~~~g~~gsr~~~G~~~~~~lE~~~~~~la~l~g~~~alv~~~SG~~A~~~~l~al~-------- 111 (416)
T PRK13034 40 TSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEFVDEVEALAIERAKQLFGCDYANVQPHSGSQANGAVYLALL-------- 111 (416)
T ss_pred CCHHHHHHhcchhhcCCCCCCCCCcccCCChHHHHHHHHHHHHHHHHhCCCceEEecCCcHHHHHHHHHHhc--------
Confidence 4899999999985 666543221 13466888888 999999988775 46999999999998764
Q ss_pred CCCCCCceEEEEcCCccCChhhhhhcc-CCCCcC-CCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEE-ccccCCCCc
Q 013008 185 DSKEPATEFVSFTNSFHGRTMGALALT-SKEHYR-SPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFV-EPIQGEGGI 261 (451)
Q Consensus 185 ~~~~~~~~ii~~~~~yhg~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~-ep~~~~~G~ 261 (451)
.++|+|++.+.+|.+........+ ....+. ..+ ...+. ....|+++++++++..++++|++ ++++++.
T Consensus 112 ---~~GD~Vl~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~---~~~~d~~~le~~l~~~~~klVi~~~~~~g~~-- 182 (416)
T PRK13034 112 ---KPGDTILGMSLSHGGHLTHGAKVSLSGKWYNAVQY-GVDRL---TGLIDYDEVEELAKEHKPKLIIAGFSAYPRE-- 182 (416)
T ss_pred ---CCCCEEEEcCccceeeeecCCcceeccceeeeEEc-ccccc---cCCcCHHHHHHHHhhcCCeEEEECCCccccc--
Confidence 268888888777654222111111 000000 000 00000 01158999999886445677777 5666543
Q ss_pred cccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccccccCCCccee--eecccccCCcccccccccH-HHHhhccC
Q 013008 262 YSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIM--TLAKPLAGGLPIGAALVTE-KVASAINY 338 (451)
Q Consensus 262 ~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~--t~sK~lg~G~~iG~v~~~~-~i~~~~~~ 338 (451)
.+ +++|.++|++||++||+|++|+ +|..+.+......+ ..|++ +++|+++|+ ..|++++++ ++.+.++.
T Consensus 183 -~d----l~~l~~la~~~g~~livD~Aha-~G~~~~g~~~~~~~-~~Di~~~s~~K~l~g~-~GG~v~~~~~~~~~~~~~ 254 (416)
T PRK13034 183 -LD----FARFREIADEVGALLMVDMAHI-AGLVAAGEHPNPFP-HAHVVTTTTHKTLRGP-RGGMILTNDEEIAKKINS 254 (416)
T ss_pred -cC----HHHHHHHHHHcCCEEEEeCccc-ccCcccCCCCCCCC-CceEEEEeCcccCCCC-CCeEEEECcHHHHHHHHh
Confidence 34 8899999999999999999995 55544322111112 35665 567999653 236666654 45454443
Q ss_pred CCccCCCC-C-cHHHHHHHHHHHHHhcC--hHHHHH-------HHhCCC--Ccceec--ccceeEEEEecC---ChHHHH
Q 013008 339 GDHGSTFA-G-SPLVCNAAIAVLDKISN--PAFLAS-------KLARNP--HVKDVR--GLGLIIGIEFDV---SATPVV 400 (451)
Q Consensus 339 ~~~~~t~~-~-~~~~~aaa~aal~~~~~--~~~~~~-------~~~~~~--~~~~v~--g~G~~~~~~~~~---~~~~~~ 400 (451)
....+..+ . ++..++++++.++.++. .++.++ +.+.+. .+.... ....+..+.+.. ....+.
T Consensus 255 ~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~l~~~a~~l~~~L~~~G~~~~~~~~~t~i~~v~~~~~~~~~~~~~ 334 (416)
T PRK13034 255 AVFPGLQGGPLMHVIAAKAVAFGEALQPEFKTYAKQVIANAQALAEVLKERGYDLVSGGTDNHLLLVDLRPKGLSGKDAE 334 (416)
T ss_pred hcCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHcCCEeccCCCCCcEEEEEcCCCCCCHHHHH
Confidence 22211111 2 23333444455555432 122333 222111 111111 234555565532 335566
Q ss_pred HHHHHCCceeeecC---------CCCEEEEeCCC----CCCHHHHHHHHHHHHHHHHH
Q 013008 401 DACRDSGLLVLTAG---------KGNVVRLVPPL----IISEQELDQAVEILCKTLPV 445 (451)
Q Consensus 401 ~~l~~~Gv~~~~~~---------~~~~iri~~~~----~~t~e~i~~~l~~l~~~l~~ 445 (451)
+.|.++||++.+.. ....+|++++. .++++|++++++.|++++.+
T Consensus 335 ~~L~~~GI~v~~~~~p~~~~~p~~~~~lR~~~~~~t~~~~~~~di~~l~~~l~~~~~~ 392 (416)
T PRK13034 335 QALERAGITVNKNTVPGDTESPFVTSGIRIGTPAGTTRGFGEAEFREIANWILDVLDD 392 (416)
T ss_pred HHHHhCCcEEeccCCCCCCcCCCCCCeeEeCcHHHHhCCCCHHHHHHHHHHHHHHHhc
Confidence 78888999987411 12469998888 78899999999999988764
No 229
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.82 E-value=1.2e-18 Score=163.69 Aligned_cols=328 Identities=20% Similarity=0.248 Sum_probs=220.2
Q ss_pred EEEeecccEEEecCCCEEEeeccCcccccCCC-CCHHHHHHHHHHHhhcccccC-----CCCCHHHHHHHHHHhhccCCC
Q 013008 83 VLASGKGCKLYDAEGREYLDLSSGIAVNALGH-GDADWIKAVVDQANVLTHVSN-----MYYSIPQIELAKRLVACSFAD 156 (451)
Q Consensus 83 ~~~~~~G~~l~d~~G~~~iD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~~~~-----~~~~~~~~~l~~~l~~~~~~e 156 (451)
+++..-+..++ .||+.+++|.|.+. ||. .++++.+.+...+++++.++. ++..+.+.+|+++|++++|.|
T Consensus 80 v~e~~~~~~~~-i~G~~~~N~aS~Nf---L~l~~~~~ike~a~~~lrkyGvGsCGPrGFYGt~DvHldlE~~iakF~G~E 155 (467)
T KOG1358|consen 80 VLESVMLPHVT-IDGKDVLNFASANF---LGLIENEEIKEEASFTLRKYGVGSCGPRGFYGTIDVHLDLEKRIAKFMGTE 155 (467)
T ss_pred ccccccCCceE-ecCceeecccchhh---hhhcccHHHHHHHHHHHHHhCCCCcCCCcccccceeecccHHHHHHhhCCc
Confidence 35555566655 69999999999766 666 689999999999999865532 233445899999999999988
Q ss_pred eEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHH
Q 013008 157 RVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIE 236 (451)
Q Consensus 157 ~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 236 (451)
..++.+-|..++..++.+ |++ +.+|++.+..-+=....++.+ ....+.++.+||++
T Consensus 156 ~aivYs~gF~ti~S~ipa---fsK---------rGDIi~~de~~nfaIq~Glql------------SRS~i~~Fkhndm~ 211 (467)
T KOG1358|consen 156 DAIVYSYGFSTIESAIPA---FSK---------RGDIIFVDEAVNFAIQKGLQL------------SRSTISYFKHNDME 211 (467)
T ss_pred ceeeeccccchhhhcchh---hhc---------cCcEEEEehhhhHHHHHHHhh------------hhheeEEecCCCHH
Confidence 777777799999999994 442 455666655433222121111 12446678889999
Q ss_pred HHHHhcCCCC------------eEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEecccc-C-CCccccccccc
Q 013008 237 ATRKLIQPGK------------TAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQC-G-LGRTGYLWAHE 302 (451)
Q Consensus 237 ~le~~l~~~~------------~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-g-~gr~G~~~~~~ 302 (451)
+||+.+.... ...|++|.++.|.|.++| +++|.++..||...+|.||.++ | +|++|++ ..+
T Consensus 212 ~lerll~E~~~~~~K~~k~~~~Rrfiv~EGl~~N~g~i~p----l~~iv~lk~Kyk~RvildEs~SfG~lg~~GrG-vte 286 (467)
T KOG1358|consen 212 DLERLLPEQEDEDQKNPKKALTRRFIVVEGLYANTGDICP----LPEIVKLKNKYKFRVILDESLSFGVLGKTGRG-VTE 286 (467)
T ss_pred HHHHhccCcchhhhhccccccceEEEEEEeeccCCCcccc----cHHHHHHHhhheEEEEEecccccccccccCcc-ccc
Confidence 9998875211 568899999999999999 9999999999999999999986 2 3455554 578
Q ss_pred ccCCC---cceeeec--ccccCCcccccccccHHHHhhccCCCccCCCC--CcHHHHHHHHHHHHHhcC-hHHHHHHHhC
Q 013008 303 HYGIF---PDIMTLA--KPLAGGLPIGAALVTEKVASAINYGDHGSTFA--GSPLVCNAAIAVLDKISN-PAFLASKLAR 374 (451)
Q Consensus 303 ~~~~~---pdi~t~s--K~lg~G~~iG~v~~~~~i~~~~~~~~~~~t~~--~~~~~~aaa~aal~~~~~-~~~~~~~~~~ 374 (451)
|+++. .|+++.| -+++. ..|+++++.-+.+.-+-...++.|+ .+|....||..++.+++. ++..+.+.+.
T Consensus 287 H~~v~~~~iDiv~~sm~~alas--~GgFc~G~~~i~~hQrLSg~~Y~fSAslPp~la~aa~~ai~i~~~~p~~~~~L~~k 364 (467)
T KOG1358|consen 287 HFGVPITDIDIVTASMETALAS--GGGFCAGKSFIADHQRLSGSGYCFSASLPPYLAGAAIKAILIEEWNPEIVQPLRAK 364 (467)
T ss_pred cCCCCccceeeeeecccccccc--cCceeecceeeEeeeeccccceeeeccCchhhhhhHHHHHHHHhhCcchhhhhhcc
Confidence 88875 4666554 45543 2266667655555433334455555 457888888888887754 3433332221
Q ss_pred ----CCCcce-----ecc--cceeEEEEecC----------ChHHHHHHHHHCCceeeecC---------CCCEEEEeCC
Q 013008 375 ----NPHVKD-----VRG--LGLIIGIEFDV----------SATPVVDACRDSGLLVLTAG---------KGNVVRLVPP 424 (451)
Q Consensus 375 ----~~~~~~-----v~g--~G~~~~~~~~~----------~~~~~~~~l~~~Gv~~~~~~---------~~~~iri~~~ 424 (451)
++.... +.+ ...+.-+.+.. .-.++++.++.+|+++.... -...+|++.+
T Consensus 365 ~~~~H~~l~~~s~~~v~~~~~SPi~hl~l~~~~~s~e~e~~lL~eivd~~i~~~~ll~~a~~~~~~e~~~~~pSiri~~~ 444 (467)
T KOG1358|consen 365 VAKFHAALSSNSGFIVSGSPESPIIHLQLERSYGSREKEEKLLEEIVDKCIAEGVLLTRAKYLEKLERCPIPPSIRICVS 444 (467)
T ss_pred ccccchhhhcCCceEEecCcCCceeeeeecccccchHHHHHHHHHHHHHHHhhcceehhhhhhhhcccCCCCCcEEEEEe
Confidence 111111 111 22233333321 12356677777788776431 1246999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHH
Q 013008 425 LIISEQELDQAVEILCKTLPV 445 (451)
Q Consensus 425 ~~~t~e~i~~~l~~l~~~l~~ 445 (451)
..+++|||+++.+.|+++...
T Consensus 445 a~~seeel~ra~~~ik~~~~~ 465 (467)
T KOG1358|consen 445 AGMSEEELERAAELIKEVASA 465 (467)
T ss_pred CCCCHHHHHHHHHHHHHHHHh
Confidence 999999999999999987654
No 230
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.82 E-value=1e-17 Score=167.18 Aligned_cols=302 Identities=15% Similarity=0.132 Sum_probs=186.9
Q ss_pred CCHHHHHHHHHHHhhcccccCCCC--CHHHHHHHHHHhhccCC--CeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCC
Q 013008 115 GDADWIKAVVDQANVLTHVSNMYY--SIPQIELAKRLVACSFA--DRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPA 190 (451)
Q Consensus 115 ~~p~v~~a~~~~~~~~~~~~~~~~--~~~~~~l~~~l~~~~~~--e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~ 190 (451)
.+|.+.+++...+.........+. .....++.++++++++. +.+++++||++++..++++++..... + .++
T Consensus 32 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~----~~g 106 (373)
T TIGR03812 32 PHPIAVKAYDMFIETNLGDPGLFPGTKKIEEEVVGSLGNLLHLPDAYGYIVSGGTEANIQAVRAAKNLARE-E----KRT 106 (373)
T ss_pred chHHHHHHHHHHhhcCCCCcccCccHHHHHHHHHHHHHHHhCCCCCCeEEeccHHHHHHHHHHHHHHHHhc-c----CCC
Confidence 667778888776554221122122 23357888999999883 46788999999999998876543210 0 135
Q ss_pred ceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeC-----CCHHHHHHhcCCCCeEEEEEccccCCCCccccC
Q 013008 191 TEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEY-----GNIEATRKLIQPGKTAAVFVEPIQGEGGIYSAT 265 (451)
Q Consensus 191 ~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~ 265 (451)
+.|++.+++|+.+... ....|. .+..++. .|++++++.+.++..+++++.|. ++.|.+.+
T Consensus 107 ~~vl~~~~~h~~~~~~-~~~~G~------------~~~~v~~~~~~~~d~~~l~~~l~~~~~~vv~~~~~-~~tG~~~~- 171 (373)
T TIGR03812 107 PNIIVPESAHFSFEKA-AEMLGL------------ELRYAPLDEDYTVDVKDVEDLIDDNTIGIVGIAGT-TELGQIDD- 171 (373)
T ss_pred cEEEECCcchHHHHHH-HHHcCC------------eEEEEeeCCCCCcCHHHHHHHHhhCcEEEEEECCC-CCCCccCC-
Confidence 7899988877654322 222121 1222222 38999999987555566767664 55677666
Q ss_pred HHHHHHHHHHHHHhCCEEEEeccccCCCcccc--c-c---cccccCCCcceeeec--ccccCCccccccc-ccHHHHhhc
Q 013008 266 KEFLQFLRDACDDAGALLVFDEVQCGLGRTGY--L-W---AHEHYGIFPDIMTLA--KPLAGGLPIGAAL-VTEKVASAI 336 (451)
Q Consensus 266 ~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~--~-~---~~~~~~~~pdi~t~s--K~lg~G~~iG~v~-~~~~i~~~~ 336 (451)
+++|.++|++||+++|+|++|.++ ..+. + . ..+..-...|.++++ |...++.|.|+++ .++++.+.+
T Consensus 172 ---~~~i~~l~~~~~~~livD~a~~~~-~~~~~~~~~~~~~~d~~~~~~d~~~~s~~K~~~~~~~~G~~~~~~~~~~~~l 247 (373)
T TIGR03812 172 ---IEELSKIALENGIYLHVDAAFGGF-VIPFLKKGYNPPPFDFSLPGVQSITIDPHKMGLSPIPAGGILFRSKSYLKYL 247 (373)
T ss_pred ---HHHHHHHHHHcCCeEEEEcCchhH-HHHHHhcCCCCCCccccCCCCCEEEECccccCCCcCCceEEEEeCHHHHhhh
Confidence 999999999999999999999643 1110 0 0 011100134555553 7333457787655 577777766
Q ss_pred cCCC--ccCC------CCCcHHHHHHHHHHHHHhcChHH---HHH----------HHhCCCCcceecccceeEEEEecCC
Q 013008 337 NYGD--HGST------FAGSPLVCNAAIAVLDKISNPAF---LAS----------KLARNPHVKDVRGLGLIIGIEFDVS 395 (451)
Q Consensus 337 ~~~~--~~~t------~~~~~~~~aaa~aal~~~~~~~~---~~~----------~~~~~~~~~~v~g~G~~~~~~~~~~ 395 (451)
.... .... .+.++..++++.++|+.+.++++ .++ .+++++....+.+...++.+.+. .
T Consensus 248 ~~~~~~~~~~~~~~~~gt~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~v~~~~~-~ 326 (373)
T TIGR03812 248 SVDAPYLTVKKQATITGTRSGASAAATYAVIKYLGREGYRKIVAECMENTRYLVEELKKIGFEPVIEPVLNIVAFEVD-D 326 (373)
T ss_pred cccCcccCCCCCcceEeechhHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEcCCCceEEEEEeC-C
Confidence 3211 0110 12345677888888887655432 222 12233322122233444445443 3
Q ss_pred hHHHHHHHHHCCceeeecCCCCEEEEeCCCCCCHHHHHHHHHHHHH
Q 013008 396 ATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCK 441 (451)
Q Consensus 396 ~~~~~~~l~~~Gv~~~~~~~~~~iri~~~~~~t~e~i~~~l~~l~~ 441 (451)
...+.+.|.++|+++.+...+..+|++++..+|++|+++++++|++
T Consensus 327 ~~~v~~~L~~~gi~v~~~~~~~~iRis~~~~~t~edid~l~~~L~~ 372 (373)
T TIGR03812 327 PEEVRKKLRDRGWYVSVTRCPKALRIVVMPHVTREHIEEFLEDLKE 372 (373)
T ss_pred HHHHHHHHHHCCceeccCCCCCEEEEEEECCCCHHHHHHHHHHHhh
Confidence 5679999999999998764347899999988999999999999975
No 231
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.82 E-value=1e-18 Score=173.82 Aligned_cols=197 Identities=18% Similarity=0.137 Sum_probs=145.3
Q ss_pred cCCCCCHHHHHHHHHHhhccCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCC
Q 013008 134 SNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK 213 (451)
Q Consensus 134 ~~~~~~~~~~~l~~~l~~~~~~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~ 213 (451)
+..+.++...+|+++++++.+.+.+++++||++|+..+++.+.. ++++||+..+.|++.........
T Consensus 34 y~r~~~p~~~~le~~la~l~g~~~a~~~~sG~~Ai~~~l~~l~~-----------~gd~Vl~~~~~y~~~~~~~~~~~-- 100 (369)
T cd00614 34 YSRIGNPTVDALEKKLAALEGGEAALAFSSGMAAISTVLLALLK-----------AGDHVVASDDLYGGTYRLFERLL-- 100 (369)
T ss_pred eECCCChhHHHHHHHHHHHHCCCCEEEEcCHHHHHHHHHHHHcC-----------CCCEEEECCCCcchHHHHHHHHH--
Confidence 44556777999999999999988899999999999999997652 68899999999877542211110
Q ss_pred CCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCC
Q 013008 214 EHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLG 293 (451)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~g 293 (451)
......+.+++.+|++++++++++ ++++|++|+++++.|.+.+ +++|.++|++||+++|+|+++...
T Consensus 101 -------~~~g~~~~~v~~~d~~~l~~~i~~-~~~~v~~e~~~np~g~~~d----l~~i~~la~~~g~~livD~t~~~~- 167 (369)
T cd00614 101 -------PKLGIEVTFVDPDDPEALEAAIKP-ETKLVYVESPTNPTLKVVD----IEAIAELAHEHGALLVVDNTFATP- 167 (369)
T ss_pred -------hhcCeEEEEeCCCCHHHHHHhcCC-CCeEEEEECCCCCCCeecC----HHHHHHHHHHcCCEEEEECCCcch-
Confidence 011234566777889999999965 6789999999888888776 999999999999999999998532
Q ss_pred cccccccccccCCCccee--eecccccC-C-cccccccccH-HHHhhccCCCccCCCCCcHHHHHHHHHHHHH
Q 013008 294 RTGYLWAHEHYGIFPDIM--TLAKPLAG-G-LPIGAALVTE-KVASAINYGDHGSTFAGSPLVCNAAIAVLDK 361 (451)
Q Consensus 294 r~G~~~~~~~~~~~pdi~--t~sK~lg~-G-~~iG~v~~~~-~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~ 361 (451)
... ......+|++ +++|.++| | .++|++++++ ++++.++..........+|+.+++++..|+.
T Consensus 168 ~~~-----~~~~~g~Divv~S~tK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~g~~~~p~~a~~~l~~l~t 235 (369)
T cd00614 168 YLQ-----RPLELGADIVVHSATKYIGGHSDVIAGVVVGSGEALIQRLRFLRLALGTILSPFDAWLLLRGLKT 235 (369)
T ss_pred hcC-----ChhhhCCcEEEeccceeccCCCCceEEEEEeCcHHHHHHHHHHHHhhCCCCCHHHHHHHHcCCCC
Confidence 111 1122345666 77899986 5 7889999976 8888775432223445678887776665543
No 232
>PLN02368 alanine transaminase
Probab=99.82 E-value=4.3e-19 Score=177.86 Aligned_cols=202 Identities=10% Similarity=0.005 Sum_probs=138.2
Q ss_pred HHHHHHHHHHhhccC----CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCC
Q 013008 140 IPQIELAKRLVACSF----ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEH 215 (451)
Q Consensus 140 ~~~~~l~~~l~~~~~----~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~ 215 (451)
+.++++++++.+..+ .++|++|+|+++|+..+++++.. +++|.|++++|+|..+.......+....
T Consensus 111 ~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~----------~pGd~Vli~~P~Y~~y~~~~~~~g~~~v 180 (407)
T PLN02368 111 GVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQILNAVIR----------GEKDGVLVPVPQYPLYSATISLLGGTLV 180 (407)
T ss_pred HHHHHHHHHHHHhcCCCCChhhEEEcccHHHHHHHHHHHHcC----------CCCCEEEEeCCCCccHHHHHHHcCCEEE
Confidence 346677777766544 67999999999999999886541 1589999999999988755443332211
Q ss_pred cCCCCcCCCCCeeEeeCCCHHHHHHhcCC-----CCeE-EEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccc
Q 013008 216 YRSPFEPVMPGVNFVEYGNIEATRKLIQP-----GKTA-AVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQ 289 (451)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~d~~~le~~l~~-----~~~a-avi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~ 289 (451)
. .+...+..+ .-|+++|++.+++ .+++ +++++|.| ++| .+++.+.+++|.++|++||++||+||+|
T Consensus 181 -~---v~~~~~~~~--~~d~~~le~~i~~~~~~~~~~k~l~l~nP~N-PTG-~v~s~e~l~~l~~~a~~~~~~II~DE~Y 252 (407)
T PLN02368 181 -P---YYLEESENW--GLDVNNLRQSVAQARSKGITVRAMVIINPGN-PTG-QCLSEANLREILKFCYQERLVLLGDEVY 252 (407)
T ss_pred -E---EecccccCC--CCCHHHHHHHHHHHhhcCCCeEEEEEECCCC-CCC-ccCCHHHHHHHHHHHHHcCCEEEEEccc
Confidence 1 111111001 0278999988852 1355 56666744 445 4679999999999999999999999999
Q ss_pred cCCCcccc-cc-cc-ccc-C---------CCcceeeecccc-c-CCccccccc---ccHHHHhhccCCCccCCCCCcHHH
Q 013008 290 CGLGRTGY-LW-AH-EHY-G---------IFPDIMTLAKPL-A-GGLPIGAAL---VTEKVASAINYGDHGSTFAGSPLV 351 (451)
Q Consensus 290 tg~gr~G~-~~-~~-~~~-~---------~~pdi~t~sK~l-g-~G~~iG~v~---~~~~i~~~~~~~~~~~t~~~~~~~ 351 (451)
..+.+.+. .+ .. ... + ...-+-+|||++ + .|||+||++ +++++++.+.... ..+++.|.++
T Consensus 253 ~~l~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~~~li~~~~~~~-~~~~~~~~~~ 331 (407)
T PLN02368 253 QQNIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVEEIYKVA-SIALSPNVSG 331 (407)
T ss_pred cccccCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCCCHHHHHHHHHHh-cccCCCCcHH
Confidence 88754442 11 11 110 1 112234789998 5 699999998 4888888876542 3456788899
Q ss_pred HHHHHHHHH
Q 013008 352 CNAAIAVLD 360 (451)
Q Consensus 352 ~aaa~aal~ 360 (451)
+.|+.++|+
T Consensus 332 Q~aa~~~l~ 340 (407)
T PLN02368 332 QIFMGLMVN 340 (407)
T ss_pred HHHHHHHhC
Confidence 999998885
No 233
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.82 E-value=2.4e-19 Score=171.12 Aligned_cols=277 Identities=16% Similarity=0.167 Sum_probs=195.4
Q ss_pred CCCHHHHHHHHHHhhccCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCc
Q 013008 137 YYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHY 216 (451)
Q Consensus 137 ~~~~~~~~l~~~l~~~~~~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~ 216 (451)
+.+..+.++++..+++.+.+..+.++-|..+|..-+..+. ++...|+.+.-.|++......+++
T Consensus 179 G~~~~hkelE~l~A~f~g~e~a~vF~mGf~TNs~~~p~l~------------~~gsLIiSDelNHaSi~~GaRLSg---- 242 (519)
T KOG1357|consen 179 GTTEEHKELEELVARFLGVEDAIVFSMGFATNSMNIPSLL------------GKGSLIISDELNHASLITGARLSG---- 242 (519)
T ss_pred ccHHHHHHHHHHHHHhcCCcceEEEeccccccccCcceee------------cCCcceeeccccchheeccccccC----
Confidence 3456699999999999998888888888888888777666 355677888888988766555554
Q ss_pred CCCCcCCCCCeeEeeCCCHHHHHHhcC------------CCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEE
Q 013008 217 RSPFEPVMPGVNFVEYGNIEATRKLIQ------------PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLV 284 (451)
Q Consensus 217 ~~~~~~~~~~~~~~~~~d~~~le~~l~------------~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI 284 (451)
..++.+.|||+++||++|+ +.+...|++|.+.++.|.++. |+++.++++||.++|+
T Consensus 243 --------AtiRVfkHNdm~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~iv~----Lp~vvalkkkykayl~ 310 (519)
T KOG1357|consen 243 --------ATTRVFRHNDMQGLERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGTIVD----LPEVVALKKKYKAYLY 310 (519)
T ss_pred --------ceEEEEecCCHHHHHHHHHHHHhcCCCCcCCcchheeeeeccceeccCeecc----cHHHHHhhccccEEEE
Confidence 3456788999999999986 124568999999999999998 9999999999999999
Q ss_pred EeccccC--CCcccccccccccCCCc---cee--eecccccCCcccccccccHHHHhhccCCCccCCCC--CcHHHHHHH
Q 013008 285 FDEVQCG--LGRTGYLWAHEHYGIFP---DIM--TLAKPLAGGLPIGAALVTEKVASAINYGDHGSTFA--GSPLVCNAA 355 (451)
Q Consensus 285 ~DEv~tg--~gr~G~~~~~~~~~~~p---di~--t~sK~lg~G~~iG~v~~~~~i~~~~~~~~~~~t~~--~~~~~~aaa 355 (451)
.||+|+. .|++|.+ ..+.+++.| ||+ +|.|++++ ..|++.+++++++.++......+++ .+|+.+.-.
T Consensus 311 lDEAHSiGA~g~tGrg-vce~~g~d~~dvDImMGtftKSfga--~GGyiagsk~lid~lrt~s~~~~yat~~sppvaqq~ 387 (519)
T KOG1357|consen 311 LDEAHSIGAMGATGRG-VCEYFGVDPEDVDIMMGTFTKSFGA--AGGYIAGSKELIDYLRTPSPSALYATSLSPPVAQQI 387 (519)
T ss_pred eeccccccccCCCCcc-eeeccCCCchhheeecceehhhccc--ccceecCcHHHHhhhccCCCceeecccCChHHHHHH
Confidence 9999974 4566653 567777754 443 78899974 1388999999999987654444443 456666667
Q ss_pred HHHHHHhcCh---HHHHH----HHhCCC-CcceecccceeEEE---------Ee--cCChHHHHHHHHHCCceeeecCCC
Q 013008 356 IAVLDKISNP---AFLAS----KLARNP-HVKDVRGLGLIIGI---------EF--DVSATPVVDACRDSGLLVLTAGKG 416 (451)
Q Consensus 356 ~aal~~~~~~---~~~~~----~~~~~~-~~~~v~g~G~~~~~---------~~--~~~~~~~~~~l~~~Gv~~~~~~~~ 416 (451)
+.+++.+..+ +..++ ++++.. .....+..|+++.= -+ ...-..+.+.|+++++.+...+.+
T Consensus 388 ~ssl~~i~G~dgt~~g~~k~~~l~~ns~yfr~~l~~~gfivyG~~dSpVvplll~~~~k~~~f~r~~l~~nigvVvvgfP 467 (519)
T KOG1357|consen 388 LTSVKHIMGEDGTNRGRQKIERLAENSRYFRWELQKMGFIVYGNNDSPVVPLLLYGPAKIVAFSREMLERNIGVVVVGFP 467 (519)
T ss_pred HHHHHhhcCCCcccHHHHHHHHHHhhhHHHHHhhhcCcEEEecCCCCCcceeeecCcccccHHHHHHHhcCceEEEEeCC
Confidence 7778777532 12111 222211 11112233332210 01 123356778899987766554432
Q ss_pred ------CEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q 013008 417 ------NVVRLVPPLIISEQELDQAVEILCKTLP 444 (451)
Q Consensus 417 ------~~iri~~~~~~t~e~i~~~l~~l~~~l~ 444 (451)
...|++.+..++.|+++++++.+++.-+
T Consensus 468 atpl~e~r~R~c~Sa~ht~e~ld~~l~~i~~~g~ 501 (519)
T KOG1357|consen 468 ATPLLESRARFCLSASHTKEDLDRALEVIDRVGD 501 (519)
T ss_pred CchHHHhHHHhhhcccccHHHHHHHHHHHhhhch
Confidence 3469999999999999999999987653
No 234
>PLN02397 aspartate transaminase
Probab=99.82 E-value=4e-18 Score=172.49 Aligned_cols=239 Identities=11% Similarity=0.081 Sum_probs=142.0
Q ss_pred CCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCC-CCeeEeeCCCHHHHHHhcCC--CCeEEEEEccccCCCCccccC
Q 013008 189 PATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVM-PGVNFVEYGNIEATRKLIQP--GKTAAVFVEPIQGEGGIYSAT 265 (451)
Q Consensus 189 ~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~le~~l~~--~~~aavi~ep~~~~~G~~~~~ 265 (451)
++|.|++.+|+|.++.......+...... ++. ++.. -.|++.+++.+.. .+..++++...++++| .+++
T Consensus 141 pGd~Vlv~~P~y~~y~~~~~~~g~~~~~v----~l~~~~~~---~~d~~~l~~~l~~~~~~~~~i~~~~P~NPTG-~v~s 212 (423)
T PLN02397 141 PGSTIYIPNPTWGNHHNIFRDAGVPVRTY----RYYDPKTR---GLDFDGLLEDLKAAPDGSFVLLHACAHNPTG-VDPT 212 (423)
T ss_pred CCCEEEEeCCCchhHHHHHHHcCCeEEEe----ecccCcCC---ccCHHHHHHHHHhCCCCCEEEEeCCCCCCCC-CCCC
Confidence 58999999999988865544433322110 110 0000 0277877777652 3344444443444445 4679
Q ss_pred HHHHHHHHHHHHHhCCEEEEeccccCCCcccc---ccccccc---C-CCcceeeeccccc-CCccccccc---ccHHHHh
Q 013008 266 KEFLQFLRDACDDAGALLVFDEVQCGLGRTGY---LWAHEHY---G-IFPDIMTLAKPLA-GGLPIGAAL---VTEKVAS 334 (451)
Q Consensus 266 ~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~---~~~~~~~---~-~~pdi~t~sK~lg-~G~~iG~v~---~~~~i~~ 334 (451)
.+.+++|.++|++||+++|+||+|.+|...+. ......+ + ...-+.+|||+++ .|+|+||++ .++++++
T Consensus 213 ~e~l~~i~~~a~~~~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~G~RvG~~v~~~~~~~~~~ 292 (423)
T PLN02397 213 PEQWEQISDLIKSKNHLPFFDSAYQGFASGDLDADAQSVRMFVEDGHEILVAQSYAKNMGLYGERVGALSVVCKSADVAV 292 (423)
T ss_pred HHHHHHHHHHHHhCCcEEEEecccCCccCCchhhhhHHHHHHHhcCCcEEEEEECcccCCCccccceEEEEEeCCHHHHH
Confidence 99999999999999999999999999854331 1111111 1 1222347999999 599999984 3555544
Q ss_pred h----ccCCCccCCCCCcHHHHHHHHHHHHHhc-ChHH---HHH--------------HHhCCC---Cccee-cccceeE
Q 013008 335 A----INYGDHGSTFAGSPLVCNAAIAVLDKIS-NPAF---LAS--------------KLARNP---HVKDV-RGLGLII 388 (451)
Q Consensus 335 ~----~~~~~~~~t~~~~~~~~aaa~aal~~~~-~~~~---~~~--------------~~~~~~---~~~~v-~g~G~~~ 388 (451)
. +.........+.+.+++.++.++|+.-. .+.+ +++ .++.+. .+..+ +..|+++
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~~~~~~~~~~p~gg~fl 372 (423)
T PLN02397 293 RVKSQLKLIARPMYSNPPIHGASIVATILGDPELFSEWTKELKGMADRIISMRQKLYDALEARGSPGDWSHITKQIGMFS 372 (423)
T ss_pred HHHHHHHHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccCCceEEE
Confidence 3 2221122233456677777776664210 0011 111 122221 12222 3346666
Q ss_pred EEEecCChHHHHHHHHH-CCceeeecCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q 013008 389 GIEFDVSATPVVDACRD-SGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTLP 444 (451)
Q Consensus 389 ~~~~~~~~~~~~~~l~~-~Gv~~~~~~~~~~iri~~~~~~t~e~i~~~l~~l~~~l~ 444 (451)
|+.++ .++++.|++ .||++.+. + |+++. ..+++++++++++|+++++
T Consensus 373 ~~~l~---~~~~~~Ll~~~~V~v~~~---~--Ri~~~-~~~~~~i~~~~~~i~~~~~ 420 (423)
T PLN02397 373 FTGLN---KEQVDRMTKEYHIYMTRD---G--RISMA-GLSSKNVPYLADAIHAVVT 420 (423)
T ss_pred ecCCC---HHHHHHHHHhCCEEECCC---C--eEEEe-eCCHHHHHHHHHHHHHHHh
Confidence 66653 458888875 59998743 2 77543 3799999999999999974
No 235
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.82 E-value=8.6e-18 Score=161.67 Aligned_cols=323 Identities=19% Similarity=0.206 Sum_probs=202.5
Q ss_pred EEEeeccCcccccCCCCCHHHHHHHHHHHhhc-ccccCC--CCCH---HHHHHHHHHhhccC--CCeEEecCCHHHHHHH
Q 013008 99 EYLDLSSGIAVNALGHGDADWIKAVVDQANVL-THVSNM--YYSI---PQIELAKRLVACSF--ADRVFFSNTGTEANEA 170 (451)
Q Consensus 99 ~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~-~~~~~~--~~~~---~~~~l~~~l~~~~~--~e~v~~~~sG~eA~~~ 170 (451)
-|+|..+... -+|++.+++...+... ++.+.. +... ..++-.+.+++.++ .+.|+||++|||++..
T Consensus 3 iYlD~~ATTp------~~~~v~~~m~~~~~~~fgNPsS~H~~G~~A~~~ve~AR~~iA~llga~~~eIiFTSG~TEsnNl 76 (386)
T COG1104 3 IYLDNAATTP------VDPEVLEAMLPYLTEVFGNPSSLHSFGREARKAVEEAREQIAKLLGADPEEIIFTSGATESNNL 76 (386)
T ss_pred ccccccccCC------CCHHHHHHHHHHHHhhcCCccchhHhHHHHHHHHHHHHHHHHHHhCCCCCeEEEecCCcHHHHH
Confidence 4788777554 5799999999998774 221111 1111 13455566777776 6799999999999999
Q ss_pred HHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEE
Q 013008 171 AIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAV 250 (451)
Q Consensus 171 al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aav 250 (451)
||+.+....... ++.+=|+.+..-|......+.......+.--|.|...+-.. |+++|+++|++ ++.+|
T Consensus 77 aI~g~~~a~~~~------~~~~HIIts~iEH~aVl~~~~~Le~~g~~Vtyl~V~~~G~v----~~e~L~~al~~-~T~LV 145 (386)
T COG1104 77 AIKGAALAYRNA------QKGKHIITSAIEHPAVLNTCRYLERQGFEVTYLPVDSNGLV----DLEQLEEALRP-DTILV 145 (386)
T ss_pred HHHhhHHhhhcc------cCCCeEEEcccccHHHHHHHHHHHhcCCeEEEeCCCCCCeE----cHHHHHHhcCC-CceEE
Confidence 999653222111 13334555567777766554422111111111122221111 89999999985 58899
Q ss_pred EEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccccccCCCcceeeeccc-ccCCccccccccc
Q 013008 251 FVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKP-LAGGLPIGAALVT 329 (451)
Q Consensus 251 i~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~t~sK~-lg~G~~iG~v~~~ 329 (451)
.+.-+|++.|++.| +++|.++|+++|+++++|-||+ +|+. ..+......|+++||-. ++|.-.+|++..+
T Consensus 146 Sim~aNnE~G~IQp----I~ei~~i~k~~~i~fHvDAvQa-~Gki----pi~~~~~~vD~ls~SaHK~~GpkGiGaLyv~ 216 (386)
T COG1104 146 SIMHANNETGTIQP----IAEIGEICKERGILFHVDAVQA-VGKI----PIDLEELGVDLLSFSAHKFGGPKGIGALYVR 216 (386)
T ss_pred EEEecccCeeeccc----HHHHHHHHHHcCCeEEEehhhh-cCce----eccccccCcceEEeehhhccCCCceEEEEEC
Confidence 99999999999999 9999999999999999999996 6554 23333345899999843 3333568888776
Q ss_pred HHHHhh--ccCC-----CccCCCCCcHHHHHHHHHHHHHhcCh---------HHHHH----HHhCCCCcce----ecccc
Q 013008 330 EKVASA--INYG-----DHGSTFAGSPLVCNAAIAVLDKISNP---------AFLAS----KLARNPHVKD----VRGLG 385 (451)
Q Consensus 330 ~~i~~~--~~~~-----~~~~t~~~~~~~~aaa~aal~~~~~~---------~~~~~----~~~~~~~~~~----v~g~G 385 (451)
+.+.-. +..+ ..++|- |..+.++.-+|++...++ .+.++ +.+..|.+.- .....
T Consensus 217 ~~~~~~p~i~GGgQE~g~RsGTe--nv~~Ivg~~~A~~~a~~~~~~~~~~~~~lr~~l~~~l~~~~p~~~~~g~~~~rlP 294 (386)
T COG1104 217 PGVRLEPLIHGGGQERGLRSGTE--NVPGIVGFGKAAEIAVEELEEENARLRKLRDRLEDGLLEIIPDVYLNGDDEPRLP 294 (386)
T ss_pred CCCccCceeccCcCCCCCCCCCc--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEcCCcccCCC
Confidence 654321 1111 223333 444444444555432111 11111 3333342211 11122
Q ss_pred eeEEEEec-CChHHHHHHHHHCCceeeecC-----------------C-----CCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 013008 386 LIIGIEFD-VSATPVVDACRDSGLLVLTAG-----------------K-----GNVVRLVPPLIISEQELDQAVEILCKT 442 (451)
Q Consensus 386 ~~~~~~~~-~~~~~~~~~l~~~Gv~~~~~~-----------------~-----~~~iri~~~~~~t~e~i~~~l~~l~~~ 442 (451)
..+.+.|. ...+.+...|-.+||.+..+. . ...+||++....|+||++.+++.|.++
T Consensus 295 ~~~~~~f~gv~gE~ll~~L~~~gI~vStGSACsS~~~~pShVL~AmG~~~e~a~~siR~S~g~~tt~eei~~~~~~l~~~ 374 (386)
T COG1104 295 NILNFSFPGVEGESLLLALDLAGIAVSTGSACSSGSLEPSHVLRAMGISEELAHGSIRFSLGRFTTEEEIDAAAEALKEI 374 (386)
T ss_pred CeEEEEeCCCcHHHHHHhccccCeEEeccccccCCCCCccHHHHHcCCChHHhCccEEEEcCCCCCHHHHHHHHHHHHHH
Confidence 34445553 456667777777799887541 0 246999999999999999999999999
Q ss_pred HHHHhhc
Q 013008 443 LPVLDSN 449 (451)
Q Consensus 443 l~~~~~~ 449 (451)
+++++..
T Consensus 375 i~~lr~~ 381 (386)
T COG1104 375 IKRLREL 381 (386)
T ss_pred HHHHhhh
Confidence 9998753
No 236
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.81 E-value=1.4e-17 Score=168.98 Aligned_cols=319 Identities=15% Similarity=0.110 Sum_probs=201.3
Q ss_pred CCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccCC-CC------CHHHHHHHHHHhhccC---CCeEEecCCHHH
Q 013008 97 GREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNM-YY------SIPQIELAKRLVACSF---ADRVFFSNTGTE 166 (451)
Q Consensus 97 G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~-~~------~~~~~~l~~~l~~~~~---~e~v~~~~sG~e 166 (451)
+.-|+|..+ .|..++.|.+++.+.+.+....... .+ .....++.+.++++++ .+.|+|++|+++
T Consensus 32 ~~iyLd~a~------~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~ 105 (424)
T PLN02855 32 KLVYLDNAA------TSQKPAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFINASTSREIVFTRNATE 105 (424)
T ss_pred CeEEeeCcc------ccCCCHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCHHH
Confidence 356788644 3456788999998877654221111 11 1124577788888887 258999999999
Q ss_pred HHHHHHHHHH-HHhhhcCCCCCCCCceEEEEcCCccCChhhhhhc---cCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhc
Q 013008 167 ANEAAIKFAR-KFQRHSNPDSKEPATEFVSFTNSFHGRTMGALAL---TSKEHYRSPFEPVMPGVNFVEYGNIEATRKLI 242 (451)
Q Consensus 167 A~~~al~~a~-~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l 242 (451)
++..+++... ... .++++||+.++.|++........ .+.... ..+..++.. .|++++++.+
T Consensus 106 al~~i~~~~~~~~~--------~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~---~v~~~~~~~----~~~~~l~~~i 170 (424)
T PLN02855 106 AINLVAYTWGLANL--------KPGDEVILSVAEHHSNIVPWQLVAQKTGAVLK---FVGLTPDEV----LDVEQLKELL 170 (424)
T ss_pred HHHHHHHHhhhhcC--------CCcCEEEECCCccHHHHHHHHHHHHHcCCEEE---EEecCCCCC----cCHHHHHHHh
Confidence 9999887531 111 15788999988776543221111 111110 011111110 2789999999
Q ss_pred CCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccccccCCCccee--eecccccCC
Q 013008 243 QPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIM--TLAKPLAGG 320 (451)
Q Consensus 243 ~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~--t~sK~lg~G 320 (451)
.+ ++++|++..+++++|.+.+ +++|.++|++||+++|+|++|. +|.. ..... ...+|++ ++.|.+|.
T Consensus 171 ~~-~t~lv~i~~~~n~tG~~~~----~~~I~~l~~~~g~~vivD~a~~-~g~~--~~~~~--~~~~d~~~~s~~K~~gp- 239 (424)
T PLN02855 171 SE-KTKLVATHHVSNVLGSILP----VEDIVHWAHAVGAKVLVDACQS-VPHM--PVDVQ--TLGADFLVASSHKMCGP- 239 (424)
T ss_pred cc-CceEEEEeCccccccccCC----HHHHHHHHHHcCCEEEEEhhhh-cCCc--CCCch--hcCCCEEEeecccccCC-
Confidence 65 6778888888888888877 8999999999999999999994 4322 11122 2346766 56795442
Q ss_pred cccccccccHHHHhhccCCCccC------------------CC---CCcHHHHHHHHHHHHHhcChH---HHHH------
Q 013008 321 LPIGAALVTEKVASAINYGDHGS------------------TF---AGSPLVCNAAIAVLDKISNPA---FLAS------ 370 (451)
Q Consensus 321 ~~iG~v~~~~~i~~~~~~~~~~~------------------t~---~~~~~~~aaa~aal~~~~~~~---~~~~------ 370 (451)
-.+|++++++++++.+.+...++ .| +.+....++..++++.+.+.+ ..++
T Consensus 240 ~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~ 319 (424)
T PLN02855 240 TGIGFLWGKSDLLESMPPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDYLSEIGMDRIHEYEVELGT 319 (424)
T ss_pred CccEEEEEchhhhhcCCCEecCCCceeeeecCccccCCChhhccCCChHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 35899999998887765321000 01 134455666667777654321 1111
Q ss_pred ----HHhCCCCcceec-------ccceeEEEEec-CChHHHHHHHHHC-CceeeecC-----------CCCEEEEeCCCC
Q 013008 371 ----KLARNPHVKDVR-------GLGLIIGIEFD-VSATPVVDACRDS-GLLVLTAG-----------KGNVVRLVPPLI 426 (451)
Q Consensus 371 ----~~~~~~~~~~v~-------g~G~~~~~~~~-~~~~~~~~~l~~~-Gv~~~~~~-----------~~~~iri~~~~~ 426 (451)
.+++++.+.-+. ..+.++.+.+. ....++.+.|.++ ||.+..+. ....+|++++..
T Consensus 320 ~l~~~L~~~~g~~i~~~~~~~~~~r~~~v~~~~~~~~~~~v~~~L~~~~gI~v~~g~~c~~~~~~~~g~~~~iRiS~~~y 399 (424)
T PLN02855 320 YLYEKLSSVPGVRIYGPKPSEGVGRAALCAFNVEGIHPTDLSTFLDQQHGVAIRSGHHCAQPLHRYLGVNASARASLYFY 399 (424)
T ss_pred HHHHHHhcCCCEEEeCCCcccccCcccEEEEEECCcCHHHHHHHhcccCCEEEechhhhhHHHHHHhCCCCeEEEEeccC
Confidence 223444332221 12446666664 4567888888887 99887532 125799999999
Q ss_pred CCHHHHHHHHHHHHHHHHHHh
Q 013008 427 ISEQELDQAVEILCKTLPVLD 447 (451)
Q Consensus 427 ~t~e~i~~~l~~l~~~l~~~~ 447 (451)
.|++|++++++.|+++++.++
T Consensus 400 nt~~di~~l~~~l~~~~~~~~ 420 (424)
T PLN02855 400 NTKEEVDAFIHALKDTIAFFS 420 (424)
T ss_pred CCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999987765
No 237
>PRK02948 cysteine desulfurase; Provisional
Probab=99.81 E-value=1.5e-17 Score=166.51 Aligned_cols=316 Identities=16% Similarity=0.117 Sum_probs=193.0
Q ss_pred EEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccCCCC------CHHHHHHHHHHhhccC--CCeEEecCCHHHHHHH
Q 013008 99 EYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYY------SIPQIELAKRLVACSF--ADRVFFSNTGTEANEA 170 (451)
Q Consensus 99 ~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~------~~~~~~l~~~l~~~~~--~e~v~~~~sG~eA~~~ 170 (451)
-|+|..+ .|..++.+.+++.+.++.........+ ....+++++.++++++ .+.|++++|+++++..
T Consensus 2 ~yld~a~------~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~i~~~~g~t~a~~~ 75 (381)
T PRK02948 2 IYLDYAA------TTPMSKEALQTYQKAASQYFGNESSLHDIGGTASSLLQVCRKTFAEMIGGEEQGIYFTSGGTESNYL 75 (381)
T ss_pred EeccCCC------CCCCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHH
Confidence 3666444 445788999999988765322111111 1235677888888886 6789999999999999
Q ss_pred HHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhc---cCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCe
Q 013008 171 AIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALAL---TSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKT 247 (451)
Q Consensus 171 al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~ 247 (451)
+++.+..... .+++.|++.. ..|......... .+.... ..+..... ..|+++|++.+.+ ++
T Consensus 76 ~~~~~~~~~~-------~~g~~vv~~~-~~h~s~~~~~~~~~~~g~~v~---~v~~~~~~----~~d~~~l~~~l~~-~~ 139 (381)
T PRK02948 76 AIQSLLNALP-------QNKKHIITTP-MEHASIHSYFQSLESQGYTVT---EIPVDKSG----LIRLVDLERAITP-DT 139 (381)
T ss_pred HHHHHHHhcc-------CCCCEEEECC-cccHHHHHHHHHHHhCCCEEE---EEeeCCCC----CCCHHHHHHhcCC-CC
Confidence 9987653110 1355566544 444443332211 111110 01111110 1388999999864 56
Q ss_pred EEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccccccCCCccee--eecccccCCccccc
Q 013008 248 AAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIM--TLAKPLAGGLPIGA 325 (451)
Q Consensus 248 aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~--t~sK~lg~G~~iG~ 325 (451)
.+|+++.+++++|.+.+ +++|.++|+++|+++|+|++++ +|... .....++ .|++ +++|.+|. ..+|+
T Consensus 140 ~lv~~~~~~n~tG~~~~----~~~I~~l~~~~~~~vivD~~~~-~g~~~--~~~~~~~--~d~~~~s~~K~~gp-~G~G~ 209 (381)
T PRK02948 140 VLASIQHANSEIGTIQP----IAEIGALLKKYNVLFHSDCVQT-FGKLP--IDVFEMG--IDSLSVSAHKIYGP-KGVGA 209 (381)
T ss_pred EEEEEECCcCCcEeehh----HHHHHHHHHHcCCEEEEEChhh-ccccc--cCcccCC--CCEEEecHHhcCCC-CcEEE
Confidence 78888888888888877 8999999999999999998875 65332 1222333 5555 67797763 22688
Q ss_pred ccccHHH-HhhccCC---C-ccCCCCCcHHHHHHHHHHHHHhcC--hHHHHH-------H---HhCCCC-cceecc----
Q 013008 326 ALVTEKV-ASAINYG---D-HGSTFAGSPLVCNAAIAVLDKISN--PAFLAS-------K---LARNPH-VKDVRG---- 383 (451)
Q Consensus 326 v~~~~~i-~~~~~~~---~-~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~-------~---~~~~~~-~~~v~g---- 383 (451)
+++++++ +..+... . ....++.|+++++++.++++.+.+ ++..++ + ++.++. +. ..+
T Consensus 210 l~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~-~~~~~~~ 288 (381)
T PRK02948 210 VYINPQVRWKPVFPGTTHEKGFRPGTVNVPGIAAFLTAAENILKNMQEESLRFKELRSYFLEQIQTLPLPIE-VEGHSTS 288 (381)
T ss_pred EEEcCCCCCCCcccCCCCCCCcCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEE-EeCCCcc
Confidence 7777664 1111110 0 012345678888888888876421 111111 1 222221 11 111
Q ss_pred -cceeEEEEec-CChHHHHHHHHHCCceeeecCC----------------------CCEEEEeCCCCCCHHHHHHHHHHH
Q 013008 384 -LGLIIGIEFD-VSATPVVDACRDSGLLVLTAGK----------------------GNVVRLVPPLIISEQELDQAVEIL 439 (451)
Q Consensus 384 -~G~~~~~~~~-~~~~~~~~~l~~~Gv~~~~~~~----------------------~~~iri~~~~~~t~e~i~~~l~~l 439 (451)
...++.+.+. ....++...|.++||.+..+.. .+.+|+++...+|+||++++++.|
T Consensus 289 ~~~~i~~~~~~~~~~~~~~~~l~~~gI~v~~g~~c~~~~~~p~~~~~~~~~~~~~~~~~lRis~~~~~t~~di~~l~~~l 368 (381)
T PRK02948 289 CLPHIIGVTIKGIEGQYTMLECNRRGIAISTGSACQVGKQEPSKTMLAIGKTYEEAKQFVRFSFGQQTTKDQIDTTIHAL 368 (381)
T ss_pred CcCCEEEEEeCCCCHHHHHHhcccCCEEEEchHhcCCCCCCCCHHHHHcCCChHHhCceEEEEcCCCCCHHHHHHHHHHH
Confidence 1123333443 3466788888889999985320 257999999999999999999999
Q ss_pred HHHHHHHh
Q 013008 440 CKTLPVLD 447 (451)
Q Consensus 440 ~~~l~~~~ 447 (451)
+++++++.
T Consensus 369 ~~~~~~~~ 376 (381)
T PRK02948 369 ETIGNQFY 376 (381)
T ss_pred HHHHHHHh
Confidence 99887654
No 238
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.81 E-value=1.5e-17 Score=166.08 Aligned_cols=299 Identities=15% Similarity=0.126 Sum_probs=184.9
Q ss_pred CCHHHHHHHHHHHhhcccc--cCCCC-----CHHHHHHHHHHhhccCC---CeEEecCCHHHHHHHHHHHHHHHhhhcCC
Q 013008 115 GDADWIKAVVDQANVLTHV--SNMYY-----SIPQIELAKRLVACSFA---DRVFFSNTGTEANEAAIKFARKFQRHSNP 184 (451)
Q Consensus 115 ~~p~v~~a~~~~~~~~~~~--~~~~~-----~~~~~~l~~~l~~~~~~---e~v~~~~sG~eA~~~al~~a~~~~~~~~~ 184 (451)
.++.+.+++.+.+++.... ...+. .....++.+.++++++. +.|++++|+++|+..++....
T Consensus 12 ~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~al~~~~~~~~-------- 83 (376)
T TIGR01977 12 KPDEVYEAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLFNAPSSAHVVFTNNATTALNIALKGLL-------- 83 (376)
T ss_pred CCHHHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHHhcc--------
Confidence 5678999999888764311 11121 13366888889998872 479999999999999887532
Q ss_pred CCCCCCceEEEEcCCccCChhhhhhc---cCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEccccCCCCc
Q 013008 185 DSKEPATEFVSFTNSFHGRTMGALAL---TSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGI 261 (451)
Q Consensus 185 ~~~~~~~~ii~~~~~yhg~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~~~~~G~ 261 (451)
.++++|++.++.|+......... .+.... ..+...+ ...|++++++.+.+ ++++|++..+++++|.
T Consensus 84 ---~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~---~v~~~~~----~~~d~~~l~~~~~~-~~~~v~~~~~~n~tG~ 152 (376)
T TIGR01977 84 ---KEGDHVITTPMEHNSVARPLECLKEQIGVEIT---IVKCDNE----GLISPERIKRAIKT-NTKLIVVSHASNVTGT 152 (376)
T ss_pred ---CCCCEEEECcchhhHHHHHHHHHHHHcCcEEE---EEecCCC----CCcCHHHHHHhcCC-CCeEEEEECCCCCccc
Confidence 15788998887765433211111 111110 0011111 01278999999965 5677777777777888
Q ss_pred cccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccccccCCCcceeeec--ccccCCcccccccccHHH-HhhccC
Q 013008 262 YSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLA--KPLAGGLPIGAALVTEKV-ASAINY 338 (451)
Q Consensus 262 ~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~t~s--K~lg~G~~iG~v~~~~~i-~~~~~~ 338 (451)
+.+ +++|.++|+++|+++|+|++++ +|... +... ...+|++++| |.+++.-..|+++.+++. +..+..
T Consensus 153 ~~~----~~~i~~l~~~~~~~livD~a~~-~g~~~--~~~~--~~~~D~~~~s~~K~l~~p~g~g~l~~~~~~~~~~~~~ 223 (376)
T TIGR01977 153 ILP----IEEIGELAQENGIFFILDAAQT-AGVIP--IDMT--ELAIDMLAFTGHKGLLGPQGTGGLYIREGIKLKPLKS 223 (376)
T ss_pred cCC----HHHHHHHHHHcCCEEEEEhhhc-cCccC--CCch--hcCCCEEEecccccccCCCCceEEEEcCCcCcCceec
Confidence 777 8999999999999999999995 54331 1112 2347777554 988753345666555442 222211
Q ss_pred CCc---c-------------CCCCCcHHHHHHHHHHHHHhcChH---HHHH----------HHhCCCCcceec-----cc
Q 013008 339 GDH---G-------------STFAGSPLVCNAAIAVLDKISNPA---FLAS----------KLARNPHVKDVR-----GL 384 (451)
Q Consensus 339 ~~~---~-------------~t~~~~~~~~aaa~aal~~~~~~~---~~~~----------~~~~~~~~~~v~-----g~ 384 (451)
... . ...+.+....++..++++.+.+.+ ..++ .+++.+.+.-+. ..
T Consensus 224 ~~~~~~~~~~~~~~~~~~r~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~ 303 (376)
T TIGR01977 224 GGTGSHSALIDQPSELPDRFESGTLNTPGIAGLNAGIKFIEKIGIANIAKKECMLTEKLLNGLREINKVKIYGPADPANR 303 (376)
T ss_pred CCCccccccccccccchhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCcccc
Confidence 100 0 011234556667777887765432 2222 222334322111 13
Q ss_pred ceeEEEEec-CChHHHHHHHHHC-CceeeecC-------------CCCEEEEeCCCCCCHHHHHHHHHHHHH
Q 013008 385 GLIIGIEFD-VSATPVVDACRDS-GLLVLTAG-------------KGNVVRLVPPLIISEQELDQAVEILCK 441 (451)
Q Consensus 385 G~~~~~~~~-~~~~~~~~~l~~~-Gv~~~~~~-------------~~~~iri~~~~~~t~e~i~~~l~~l~~ 441 (451)
+.++.+.+. .+..++.+.|.++ ||.+..+. ..+.+|+++...+|++|+++++++|++
T Consensus 304 ~~~v~~~~~~~~~~~~~~~L~~~~gi~v~~g~~~~~~~~~~~g~~~~~~iRis~~~~~t~~dv~~~~~~l~~ 375 (376)
T TIGR01977 304 VGVVSFTVEGIDSEEVADILDEKFDIATRTGLHCAPLAHKTIGTFATGTIRLSLGYFNTEEEIEKLLEALSE 375 (376)
T ss_pred CCeEEEEECCCCHHHHHHHHhccCCEEEEcccccchHHHHHhCCCCCCeEEEecCCCCCHHHHHHHHHHHhh
Confidence 456666664 4567899999887 88886532 136799999999999999999999975
No 239
>PLN02242 methionine gamma-lyase
Probab=99.80 E-value=6.6e-18 Score=169.76 Aligned_cols=179 Identities=15% Similarity=0.189 Sum_probs=131.1
Q ss_pred ccCCCCCHHHHHHHHHHhhccCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccC
Q 013008 133 VSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTS 212 (451)
Q Consensus 133 ~~~~~~~~~~~~l~~~l~~~~~~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~ 212 (451)
.+..+.++...+|+++++++++.+.+++++||++|+..++..+.. ++|.||+.++.|.+..........
T Consensus 69 ~Y~r~~~Pt~~~LE~~lA~l~g~~~~l~~~sG~~Ai~~al~al~~-----------~GD~Vl~~~~~Y~~~~~~~~~~~~ 137 (418)
T PLN02242 69 IYSRHFNPTVLNLGRQMAALEGTEAAYCTASGMSAISSVLLQLCS-----------SGGHVVASNTLYGGTHALLAHFLP 137 (418)
T ss_pred cccCCCChhHHHHHHHHHHHhCCCeEEEEccHHHHHHHHHHHHhC-----------CCCEEEEcCCcHHHHHHHHHHhhh
Confidence 345556777999999999999999999999999999999987652 689999999988654322111000
Q ss_pred CCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCC
Q 013008 213 KEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGL 292 (451)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~ 292 (451)
......+.+++..|++++++++++.++++|++|.++++.|.+.+ +++|.++|++||+++|+||+|+.+
T Consensus 138 --------~~~G~~~~~~d~~d~e~l~~~i~~~~tklV~lesp~NPtG~v~d----l~~I~~la~~~gi~livDea~~~~ 205 (418)
T PLN02242 138 --------RKCNITTTFVDITDLEAVKKAVVPGKTKVLYFESISNPTLTVAD----IPELARIAHEKGVTVVVDNTFAPM 205 (418)
T ss_pred --------hccCceEEEcCCCCHHHHHHhcCcCCCEEEEEecCCCCCCcccC----HHHHHHHHHHhCCEEEEECCCCcc
Confidence 00112234455568999999997545788889988888887765 999999999999999999999654
Q ss_pred CcccccccccccCCCcceeeecccccC-Ccc-cccccccHHHHhhccCC
Q 013008 293 GRTGYLWAHEHYGIFPDIMTLAKPLAG-GLP-IGAALVTEKVASAINYG 339 (451)
Q Consensus 293 gr~G~~~~~~~~~~~pdi~t~sK~lg~-G~~-iG~v~~~~~i~~~~~~~ 339 (451)
. ... ..++...-+.++||.+++ |.+ .|++++++++++.+...
T Consensus 206 ~-~~~----~~~g~divv~S~SK~l~g~g~~~gG~iv~~~~li~~l~~~ 249 (418)
T PLN02242 206 V-LSP----ARLGADVVVHSISKFISGGADIIAGAVCGPAELVNSMMDL 249 (418)
T ss_pred C-CCH----HHcCCcEEEEeCccccCCCCCceEEEEEcCHHHHHHHHHH
Confidence 2 211 122432333478999986 666 58999999988887643
No 240
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.80 E-value=1.2e-17 Score=166.06 Aligned_cols=270 Identities=12% Similarity=0.122 Sum_probs=176.7
Q ss_pred HHHHHHHHhhccCC----CeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhh-hhccCCCCc
Q 013008 142 QIELAKRLVACSFA----DRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGA-LALTSKEHY 216 (451)
Q Consensus 142 ~~~l~~~l~~~~~~----e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~-~~~~~~~~~ 216 (451)
..++.+.++++++. +.+++++||++|++.++..+.. +++++|+..+++++..... ....+.
T Consensus 37 ~~~~r~~la~l~~~~~~~~~i~~t~~~t~al~~~~~~l~~-----------~~~~vlv~~~~~~~~~~~~~a~~~g~--- 102 (363)
T TIGR02326 37 VEQIRQQLLALATAEEGYTSVLLQGSGTFAVEAVIGSAVP-----------KDGKLLVVINGAYGARIVQIAEYLGI--- 102 (363)
T ss_pred HHHHHHHHHHHhCCCCCceEEEEcCCCHHHHHHHHHhcCC-----------CCCeEEEEeCChhhHHHHHHHHHcCC---
Confidence 66777888888872 3699999999999999986541 4678888888887764211 111111
Q ss_pred CCCCcCCCCCeeEeeC-----CCHHHHHHhcCCC-CeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEecccc
Q 013008 217 RSPFEPVMPGVNFVEY-----GNIEATRKLIQPG-KTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQC 290 (451)
Q Consensus 217 ~~~~~~~~~~~~~~~~-----~d~~~le~~l~~~-~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t 290 (451)
.+..++. -|++++++++..+ ++..|.+..+.+++|.+.+ +++|.++|++||+++|+|++++
T Consensus 103 ---------~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~----i~~I~~l~~~~g~~livD~~~~ 169 (363)
T TIGR02326 103 ---------PHHVVDTGEVEPPDVVEVEAILAADPAITHIALVHCETTTGILNP----IEAVAKLAHRHGKVTIVDAMSS 169 (363)
T ss_pred ---------ceEEEeCCCCCCCCHHHHHHHHhhCCCccEEEEEeecCCccccCc----HHHHHHHHHHcCCEEEEEcccc
Confidence 1222221 2789999998742 4555555555666788777 8999999999999999999985
Q ss_pred CCCcccccccccccCCCccee--eecccccCCcccccccccHHHHhhccCCC------------------ccCCCCCcHH
Q 013008 291 GLGRTGYLWAHEHYGIFPDIM--TLAKPLAGGLPIGAALVTEKVASAINYGD------------------HGSTFAGSPL 350 (451)
Q Consensus 291 g~gr~G~~~~~~~~~~~pdi~--t~sK~lg~G~~iG~v~~~~~i~~~~~~~~------------------~~~t~~~~~~ 350 (451)
+|.. ......+ .+|++ +++|+++++..+|+++++++.++.+.+.. ....|..++.
T Consensus 170 -~g~~--~~~~~~~--~~D~~~~s~~K~l~~p~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ft~~~~ 244 (363)
T TIGR02326 170 -FGGI--PIDIAEL--HIDYLISSANKCIQGVPGFGFVIARQAELAACKGNARSLSLDLYDQWRCMEDNHGKWRFTSPTH 244 (363)
T ss_pred -ccCc--ccchhhc--CccEEEecCccccccCCcceEEEECHHHHHHhhcCCCceeecHHHHHHHHhccCCCCCCCCcHH
Confidence 5432 2223333 35655 56799976556799999988776543210 0123456777
Q ss_pred HHHHHHHHHHHhcChH----HHHH----------HHhCCCCcceec----ccceeEEEEec----CChHHHHHHHHHCCc
Q 013008 351 VCNAAIAVLDKISNPA----FLAS----------KLARNPHVKDVR----GLGLIIGIEFD----VSATPVVDACRDSGL 408 (451)
Q Consensus 351 ~~aaa~aal~~~~~~~----~~~~----------~~~~~~~~~~v~----g~G~~~~~~~~----~~~~~~~~~l~~~Gv 408 (451)
.+.+..++++.+..+. ..++ .++.++ +..+. ..+.+.++.+. ....++.+.|.++||
T Consensus 245 ~~~al~~al~~l~~~g~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~L~~~gi 323 (363)
T TIGR02326 245 VVHAFAQALLELEKEGGVAARHQRYQQNQKTLVAGMRALG-FEPLLDDEIQSPIITSFYSPEDPDYRFADFYQRLKEQGF 323 (363)
T ss_pred HHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcC-CeeccCcccCCceEEEEECCCCCCCCHHHHHHHHHHCCE
Confidence 7777777787653321 1111 112222 11111 12334555553 245678899999999
Q ss_pred eeeecCC--CCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q 013008 409 LVLTAGK--GNVVRLVPPLIISEQELDQAVEILCKTLP 444 (451)
Q Consensus 409 ~~~~~~~--~~~iri~~~~~~t~e~i~~~l~~l~~~l~ 444 (451)
.+.++.. .+.+|+++...++.|++++++++|++++.
T Consensus 324 ~v~~g~~~~~~~iRi~~~~~~~~edv~~~l~~l~~~l~ 361 (363)
T TIGR02326 324 VIYPGKVSQVDCFRIGNIGEVDAADITRLLTAIGKAMY 361 (363)
T ss_pred EEECCcCCCCCEEEEecCCCCCHHHHHHHHHHHHHHhC
Confidence 9987742 36799987666799999999999998763
No 241
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.80 E-value=9.5e-17 Score=159.15 Aligned_cols=315 Identities=14% Similarity=0.085 Sum_probs=183.0
Q ss_pred CEEEeeccCcccccCCCC--CHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHhhccCCCeEEecCCHHHHHHHHHHHH
Q 013008 98 REYLDLSSGIAVNALGHG--DADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFA 175 (451)
Q Consensus 98 ~~~iD~~~~~~~~~lG~~--~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~e~v~~~~sG~eA~~~al~~a 175 (451)
+.+|+..+-. ..||-+ ++++.+++.+.++.+. ...+...+++++++++++.+++++++|+++|+..+++.+
T Consensus 8 ~~~ina~g~~--t~~g~s~~~~~v~~a~~~~~~~~~-----~~~~~~~~~~~~~a~~~g~~~~~~~~g~t~al~~al~al 80 (363)
T TIGR01437 8 KKVINASGKM--TILGVSTVSDEVADAQKRGAQNYF-----EIKELVNKTGEYIANLLGVEDAVIVSSASAGIAQSVAAV 80 (363)
T ss_pred ceEEECCcEe--ecCCCCCCCHHHHHHHHHHHhcCC-----CHHHHHHHHHHHHHHhhCCCeEEEEcCHHHHHHHHHHHH
Confidence 3455533333 457764 8999999999876521 123447889999999999889999999999999999977
Q ss_pred HHHhhh-----cCCCCCCCCceEEEEcCCccCCh---hhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCe
Q 013008 176 RKFQRH-----SNPDSKEPATEFVSFTNSFHGRT---MGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKT 247 (451)
Q Consensus 176 ~~~~~~-----~~~~~~~~~~~ii~~~~~yhg~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~ 247 (451)
... +. +-....-+++.||+..|.|..+. ...+.++|..... ... . ...|++++++++.++..
T Consensus 81 ~~~-Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g~~~v~---v~~--~----~~~d~~~le~ai~~~t~ 150 (363)
T TIGR01437 81 ITR-GNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRLGGGKVVE---AGY--A----NECSAEQLEAAITEKTA 150 (363)
T ss_pred hcC-CCcchhhcccccccccceEEEECccchhcCCchHHHHHhcCCeEEE---EcC--C----CCCCHHHHHHhcChhce
Confidence 521 00 00000002348888887775442 1122222211100 000 0 11389999999976443
Q ss_pred EEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccccccCCCcceeeec--ccccCCccccc
Q 013008 248 AAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLA--KPLAGGLPIGA 325 (451)
Q Consensus 248 aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~t~s--K~lg~G~~iG~ 325 (451)
++++++...+..|...+ +++|.++|++||+++|+|++|. . ... ....+| .|++++| |.++ |++.|+
T Consensus 151 ai~~v~~~~~~~g~~~~----~~~i~~~a~~~gi~vivD~a~~-~--~~~--~~~~~g--~D~~~~S~~K~l~-gp~~G~ 218 (363)
T TIGR01437 151 AILYIKSHHCVQKSMLS----VEDAAQVAQEHNLPLIVDAAAE-E--DLQ--KYYRLG--ADLVIYSGAKAIE-GPTSGL 218 (363)
T ss_pred EEEEEecCCCCcCCcCC----HHHHHHHHHHcCCeEEEECCCC-C--chH--HHHHcC--CCEEEEeCCcccC-CCceEE
Confidence 34435543444555556 8899999999999999999996 2 111 111223 5777654 8885 456899
Q ss_pred ccccHHHHhhccCCCcc--CCCCCcHHHHHHHHHHHHHhcC--hHHHH----H------HHhCCCCcceec---ccce--
Q 013008 326 ALVTEKVASAINYGDHG--STFAGSPLVCNAAIAVLDKISN--PAFLA----S------KLARNPHVKDVR---GLGL-- 386 (451)
Q Consensus 326 v~~~~~i~~~~~~~~~~--~t~~~~~~~~aaa~aal~~~~~--~~~~~----~------~~~~~~~~~~v~---g~G~-- 386 (451)
+++++++++.+....++ ..+......+++..++++.+.+ .+..+ + .++++|.+.... ..+.
T Consensus 219 l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~gl~aAl~~~~~~~~~~~~~~~~~~~~l~~~L~~i~g~~~~~~~~~~~~~~ 298 (363)
T TIGR01437 219 VLGKKKYIEWVKLQSKGIGRAMKVGKENILGLTAALEQYLSTGKESGAEMVAKLTPFIEALNTLKGVSASIVQDEAGRDI 298 (363)
T ss_pred EEEcHHHHHHHHhccCCCcceeccCHHHHHHHHHHHHHHHccCcccHHHHHHHHHHHHHHHhcCCCeEEEEecCCCCCcC
Confidence 88888887765432111 1111111223344445544322 11111 1 334444433221 1111
Q ss_pred -eEEEEec-----CChHHHHHHHHHCC--ceeeec-CCCCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 013008 387 -IIGIEFD-----VSATPVVDACRDSG--LLVLTA-GKGNVVRLVPPLIISEQELDQAVEILCKT 442 (451)
Q Consensus 387 -~~~~~~~-----~~~~~~~~~l~~~G--v~~~~~-~~~~~iri~~~~~~t~e~i~~~l~~l~~~ 442 (451)
...+.++ ....++.+.|.++| |..++- ...+.+++.+.. .+++|++.++++|++.
T Consensus 299 ~~~~v~~~~~~~g~~~~~l~~~L~~~~~~I~~r~~~~~~~~~~l~~~~-~~~~e~~~~~~~l~~~ 362 (363)
T TIGR01437 299 ARAEIRFDESELGMTAADVVQALRQGEPAIYTRGYKANEGIIEIDPRS-VTGGQLDIIVERIREI 362 (363)
T ss_pred ceEEEEEeccCCCCCHHHHHHHHhcCCCCEEEeeeeecCCeEEEEeec-CCHHHHHHHHHHHHHh
Confidence 1122232 35688999998877 555531 123578888774 6799999999999875
No 242
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.79 E-value=1.3e-16 Score=158.84 Aligned_cols=314 Identities=19% Similarity=0.201 Sum_probs=210.9
Q ss_pred CEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccC-CC------CCHHHHHHHHHHhhccC---CCeEEecCCHHHH
Q 013008 98 REYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSN-MY------YSIPQIELAKRLVACSF---ADRVFFSNTGTEA 167 (451)
Q Consensus 98 ~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~-~~------~~~~~~~l~~~l~~~~~---~e~v~~~~sG~eA 167 (451)
--|+|...+ +..+..|.+++.+....+..... .. .+...++..+.++++++ .+.|+||++.|+|
T Consensus 23 ~vylD~aa~------~~~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~a~~~~eIvft~~tT~a 96 (405)
T COG0520 23 LVYLDNAAT------SQKPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLNADSSDEIVFTRGTTEA 96 (405)
T ss_pred eEEecCccc------ccCCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChhHH
Confidence 457886553 34788899999998765322211 11 12235677777888876 3779999999999
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCC-----CHHHHHHhc
Q 013008 168 NEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYG-----NIEATRKLI 242 (451)
Q Consensus 168 ~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~le~~l 242 (451)
+........... .++|.||+.+--+|....--..+..... ..+.++|.+ |++++++.+
T Consensus 97 ln~va~~l~~~~--------~~gdeIv~s~~EH~sn~~pw~~~~~~~G---------a~v~~i~~~~~g~~~~~~~~~~i 159 (405)
T COG0520 97 LNLVARGLGRSL--------KPGDEIVVSDLEHHSNIVPWQELAKRTG---------AKVRVIPLDDDGLLDLDALEKLI 159 (405)
T ss_pred HHHHHHHhhhhh--------cCCCEEEEccCcchhhHHHHHHHHHhcC---------cEEEEEecCCCCCcCHHHHHHhc
Confidence 999888653211 1578899888777766544333331111 123333322 688999977
Q ss_pred CCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccccccCCCcceeeec--ccccCC
Q 013008 243 QPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLA--KPLAGG 320 (451)
Q Consensus 243 ~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~t~s--K~lg~G 320 (451)
.+ ++++|.+.-+.+..|.+.| +++|.++|+++|+++++|-+|+ .+.. ..+-..+..|+..|| |.+.|.
T Consensus 160 ~~-~Tklvais~vSn~tG~~~p----v~~I~~la~~~ga~v~VDaaq~-~~h~----~idv~~l~~Df~afsgHKwl~gP 229 (405)
T COG0520 160 TP-KTKLVALSHVSNVTGTVNP----VKEIAELAHEHGALVLVDAAQA-AGHL----PIDVQELGCDFLAFSGHKWLLGP 229 (405)
T ss_pred CC-CceEEEEECccccccccch----HHHHHHHHHHcCCEEEEECccc-cCcc----CCCchhcCCCEEEEcccccccCC
Confidence 54 7899999999999999988 9999999999999999999985 3211 222334568999888 877654
Q ss_pred cccccccccHHHHhhccCCCc------------cCCCC----------CcHHHHHHHHHHHHHhcChH---HHHH-----
Q 013008 321 LPIGAALVTEKVASAINYGDH------------GSTFA----------GSPLVCNAAIAVLDKISNPA---FLAS----- 370 (451)
Q Consensus 321 ~~iG~v~~~~~i~~~~~~~~~------------~~t~~----------~~~~~~aaa~aal~~~~~~~---~~~~----- 370 (451)
-.+|.+.+++++.+.+.|... ..++. .|.....+..++++.+++.+ ..++
T Consensus 230 ~GiGvLy~r~~~l~~l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ig~~~i~~~e~~L~ 309 (405)
T COG0520 230 TGIGVLYVRKELLEELEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLEIGMEAIEAHERELT 309 (405)
T ss_pred CceEEEEEchHHHhhcCCcccCCCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 578999999999988754310 11111 12333444446666554422 2111
Q ss_pred -----HHhCCCCcceec----ccceeEEEEec-CChHHHHHHHHHCCceeeecCC-----------CCEEEEeCCCCCCH
Q 013008 371 -----KLARNPHVKDVR----GLGLIIGIEFD-VSATPVVDACRDSGLLVLTAGK-----------GNVVRLVPPLIISE 429 (451)
Q Consensus 371 -----~~~~~~~~~~v~----g~G~~~~~~~~-~~~~~~~~~l~~~Gv~~~~~~~-----------~~~iri~~~~~~t~ 429 (451)
.++.+|.+.... ..+.++.|.++ ....++...|.++||.++.+.. ...+|+++.+-.|+
T Consensus 310 ~~~~~~L~~~~~v~i~g~~~~~r~~~vsF~v~~~~~~dv~~~L~~~gI~vr~g~~ca~p~~~~~~~~~~iR~S~~~YNt~ 389 (405)
T COG0520 310 EYLLEGLSELPGVEIYGPPDADRGGIVSFNVKGIHPHDVATLLDEKGIAVRAGHHCAQPLHRLLGVDATIRASLHLYNTE 389 (405)
T ss_pred HHHHHHHhcCCCeEEecCCcccCceEEEEEeCCCCHHHHHHHHHhCCeEEEeccccccHHHHhcCCCCceEEEEeecCCH
Confidence 334556443222 24667777774 5688999999999988876532 12399999999999
Q ss_pred HHHHHHHHHHHHHHH
Q 013008 430 QELDQAVEILCKTLP 444 (451)
Q Consensus 430 e~i~~~l~~l~~~l~ 444 (451)
||||++++.|+++.+
T Consensus 390 edid~l~~aL~~~~~ 404 (405)
T COG0520 390 EDVDRLLEALKKALA 404 (405)
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999999998764
No 243
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.79 E-value=6.6e-18 Score=153.31 Aligned_cols=315 Identities=16% Similarity=0.185 Sum_probs=201.1
Q ss_pred EEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccCC-CCCHHHHHHHHHHhhccCCCeEEecCCHHHHHHHHHHHHHH
Q 013008 99 EYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNM-YYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARK 177 (451)
Q Consensus 99 ~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~-~~~~~~~~l~~~l~~~~~~e~v~~~~sG~eA~~~al~~a~~ 177 (451)
..+|+-|-.-+. .-.++++||.++.-. ... +.++...+|+++.++.+|+|..+|++||+..|..+++.-+.
T Consensus 22 ~~vDLRSDTvT~----PTdeMr~am~eA~vg----DdVyGeD~tt~rLE~~vA~l~GKEAgLFv~SGTmgNllaIm~Hc~ 93 (384)
T KOG1368|consen 22 RSVDLRSDTVTV----PTDEMRRAMAEASVG----DDVYGEDPTTNRLEQRVAELFGKEAGLFVPSGTMGNLLAIMVHCH 93 (384)
T ss_pred eccccccccccC----ChHHHHHHHhhcccC----cccccCCccHHHHHHHHHHHhCccceeeecccccccHHHHHHHhc
Confidence 456766654322 335667776665321 112 23444789999999999999999999999999999997653
Q ss_pred HhhhcCCCCCCCCceEEEEcCC-ccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCC-------CeEE
Q 013008 178 FQRHSNPDSKEPATEFVSFTNS-FHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPG-------KTAA 249 (451)
Q Consensus 178 ~~~~~~~~~~~~~~~ii~~~~~-yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~-------~~aa 249 (451)
- ++..||+-+.+ -|-|..+..+.-+....+ ...+ .++... |++++|+.+..+ .+..
T Consensus 94 ~----------rg~eii~gd~~HI~~~E~gg~s~l~gv~~~-tv~~-e~dgtm----~ledIe~~ir~~~GD~H~p~T~L 157 (384)
T KOG1368|consen 94 Q----------RGSEIIVGDRAHIHRYEQGGISQLAGVHVR-TVKN-ENDGTM----DLEDIEAAIRVPKGDCHMPPTKL 157 (384)
T ss_pred C----------CCceEEeccchheeehhccChhhhccceeE-eeee-CCCCee----eHHHHHHhhcCCCCCccCCCceE
Confidence 1 45566654432 233433333321111000 0001 011111 799999999721 3689
Q ss_pred EEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCc-ccccccccccCCCcce--eeecccccCCcccccc
Q 013008 250 VFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGR-TGYLWAHEHYGIFPDI--MTLAKPLAGGLPIGAA 326 (451)
Q Consensus 250 vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr-~G~~~~~~~~~~~pdi--~t~sK~lg~G~~iG~v 326 (451)
|++|..+++.|..+.|.+|+.++.+||++||+.|.+|-+-- |.. ...+.....+.-..|- +||||+||+ |+|-|
T Consensus 158 IclENT~~~~Gg~vlPle~~~~v~~lak~~glkLH~DGARi-~NAavasgV~vk~i~~~fDSVsiCLSKglgA--PVGSV 234 (384)
T KOG1368|consen 158 ICLENTHNNCGGKVLPLEELDRVKALAKRHGLKLHMDGARI-FNAAVASGVPVKKICSAFDSVSICLSKGLGA--PVGSV 234 (384)
T ss_pred EEeeccccccCceEeeHHHHHHHHHHHhccCCeeecchhhh-hhHHHHcCCCHHHHHHhhhhhhhhhhccCCC--CcccE
Confidence 99999888777778899999999999999999999997632 100 0001111122222343 489999965 77765
Q ss_pred -cccHHHHhhccC--CCccCCCCCcHHHHHHHHHHHHHhcChHHHHH-------HHh---CCCCc-ceec-ccceeEEEE
Q 013008 327 -LVTEKVASAINY--GDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS-------KLA---RNPHV-KDVR-GLGLIIGIE 391 (451)
Q Consensus 327 -~~~~~i~~~~~~--~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~-------~~~---~~~~~-~~v~-g~G~~~~~~ 391 (451)
++++++++..+. ...++.+-.+.+.++|++.+|+. ....++. +++ ..+.+ ..+. .+..+..+.
T Consensus 235 iVG~k~FI~kA~~~RKalGGGmRQsGvLaaaaLval~~--~~~~L~~dHk~A~~lAe~~~~~~~i~v~v~a~etNiv~~~ 312 (384)
T KOG1368|consen 235 IVGSKDFIDKARHFRKALGGGMRQSGVLAAAALVALDE--NVPLLRADHKRAKELAEYINTPEEIRVEVPAVETNIVNMV 312 (384)
T ss_pred EEccHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHhhc--chHHHHHHHHHHHHHHHHhccccceeeecchhhcceeeee
Confidence 578888876532 23455566677888999988873 2111111 222 22211 1222 345566655
Q ss_pred e---cCChHHHHHHHHHCCceeeecCCCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 013008 392 F---DVSATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTL 443 (451)
Q Consensus 392 ~---~~~~~~~~~~l~~~Gv~~~~~~~~~~iri~~~~~~t~e~i~~~l~~l~~~l 443 (451)
+ ...+..+++.+.++|+++.++.. ..+|+.+...+|+++++.++..+.+.+
T Consensus 313 l~q~~~~~~~l~~~~~k~gi~lm~~~s-~r~Rivlh~Qvt~~~ve~~~~~~~k~~ 366 (384)
T KOG1368|consen 313 LCQARLTAEELCKFLEKNGILLMGGAS-RRIRIVLHHQVTDEDVEYVKSVLSKKF 366 (384)
T ss_pred cccccCCHHHHHHHHHHCCeEEeeccc-cceEEEEEEecCHHHHHHHHHHHHHHH
Confidence 5 24578899999999999988755 668999999999999999999996554
No 244
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.78 E-value=1.7e-17 Score=156.31 Aligned_cols=309 Identities=19% Similarity=0.248 Sum_probs=190.3
Q ss_pred EeeccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHhhccCCCeEEecCCHHHHHHHHHHHHHHHhh
Q 013008 101 LDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQR 180 (451)
Q Consensus 101 iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~e~v~~~~sG~eA~~~al~~a~~~~~ 180 (451)
+||.|.+++ | .+|++++++.++-.. ....++.++...++++++++.++.+.++|++|||+||..+|.....
T Consensus 2 ~~f~SDn~~---g-~~~~m~eam~~a~~~--~~~~YG~D~~~~~~e~~~ae~~g~~a~~Fv~sGT~aN~lal~~~~~--- 72 (342)
T COG2008 2 IDFRSDNVA---G-PTPEMREALAAANAV--GDDVYGEDPTTNALEQRIAELFGKEAALFVPSGTQANQLALAAHCQ--- 72 (342)
T ss_pred CccccCccC---C-CCHHHHHHHHhcccc--CCCCCCCCHHHHHHHHHHHHHhCCceEEEecCccHHHHHHHHHhcC---
Confidence 577776652 3 789999999876432 1122344556889999999999999999999999999999996662
Q ss_pred hcCCCCCCCCceEEEEcCCccCChhhh--hhc-c-CCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCC-----CeEEEE
Q 013008 181 HSNPDSKEPATEFVSFTNSFHGRTMGA--LAL-T-SKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPG-----KTAAVF 251 (451)
Q Consensus 181 ~~~~~~~~~~~~ii~~~~~yhg~~~~~--~~~-~-~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~-----~~aavi 251 (451)
++..||+ ...-|-++... ... + +.+. +..++.. -.-++++++..+.++ .+..++
T Consensus 73 --------~~~~vi~-~~~aHi~~~E~Ga~~~~~~~~~~------~~~~g~~--Gklt~e~v~~~i~~~d~~~~~~~~~~ 135 (342)
T COG2008 73 --------PGESVIC-HETAHIYTDECGAPEFFGGGQKL------PIVPGAD--GKLTPEDVEAAIRPDDIHHAPTPLAV 135 (342)
T ss_pred --------CCCeEEE-eccccceecccCcHHHHcCCcee------ccCCCCC--CCcCHHHHHHhhcCCCcccCCCceEE
Confidence 4554544 44556444221 111 1 1110 1111100 001789999987622 345566
Q ss_pred EccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccC--CCcccccccccccCCCcceeeecccccCCccccccc-c
Q 013008 252 VEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCG--LGRTGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAAL-V 328 (451)
Q Consensus 252 ~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg--~gr~G~~~~~~~~~~~pdi~t~sK~lg~G~~iG~v~-~ 328 (451)
+|....++|. ++|.++|++|.++|++||+.|..|-+--. .-..| -....+.-..|+++|+-+-++|+|+|+|+ +
T Consensus 136 ~e~~~te~Gt-Vy~l~el~~i~~~~k~~~l~LHmDGAR~~nA~valg--~~~~~~~~~~D~v~~~~tK~g~~~~gAiv~g 212 (342)
T COG2008 136 LENTATEGGT-VYPLDELEAISAVCKEHGLPLHMDGARLANALVALG--VALKTIKSYVDSVSFCLTKGGGAPVGAIVFG 212 (342)
T ss_pred EeeccCCCce-ecCHHHHHHHHHHHHHhCCceeechHHHHHHHHHcC--CCHHHHHhhCCEEEEecccCCcceeeeEEEc
Confidence 6655557665 68999999999999999999999976311 10111 12222333567777665555577888876 6
Q ss_pred cHHHHhhccCC--CccCCCCCcHHHHHHHHHHHHHhcChHHHHH----------HHhC---CCCccee-cccceeEEEEe
Q 013008 329 TEKVASAINYG--DHGSTFAGSPLVCNAAIAVLDKISNPAFLAS----------KLAR---NPHVKDV-RGLGLIIGIEF 392 (451)
Q Consensus 329 ~~~i~~~~~~~--~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~----------~~~~---~~~~~~v-~g~G~~~~~~~ 392 (451)
++++++.++.. ..++-++-..+..++++..|+. .-|+.. +.+. .|++.-. +....++.+.+
T Consensus 213 n~~~~~~a~~~rK~~Ggl~~k~r~laA~~~~~l~~---~~~~~~~~Han~mA~~La~~~~~~~G~~~~~~~~tN~vf~~l 289 (342)
T COG2008 213 NRDFAKRARRWRKRAGGLMRKARFLAAQGLYALED---DVWRLAADHANAMAARLAEGLEAKPGVKLAFPVETNMVFVRL 289 (342)
T ss_pred CHHHHHHHHHHHHHhcccHhhhhHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHhhhhcCCceeccCCcccEEEEEC
Confidence 88888776432 3455555556666677776662 212211 3332 2233222 24566666666
Q ss_pred cC---ChHHHHHHHHHCCceeeecCCCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 013008 393 DV---SATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTL 443 (451)
Q Consensus 393 ~~---~~~~~~~~l~~~Gv~~~~~~~~~~iri~~~~~~t~e~i~~~l~~l~~~l 443 (451)
+. ........+...|++..+.+ ..+||..+..+++|+|+++++.+++++
T Consensus 290 ~~~~i~~l~~~~~~~~~~~~~~~~~--~~vRfvts~a~~~edv~~~~~~~~~~~ 341 (342)
T COG2008 290 PESAIEALRLAGALFYRGVLIGAHG--EIVRFVTSWATSEEDVDELVAAIKALL 341 (342)
T ss_pred ChHHHHHHHhhchhheeeeeccCCC--ceEEEEeeccCCHHHHHHHHHHHHHhh
Confidence 32 12223334445566655443 469999999999999999999888754
No 245
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.78 E-value=1.7e-17 Score=165.94 Aligned_cols=281 Identities=16% Similarity=0.164 Sum_probs=181.2
Q ss_pred ccCCCCCHHHHHHHHHHhhccCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccC
Q 013008 133 VSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTS 212 (451)
Q Consensus 133 ~~~~~~~~~~~~l~~~l~~~~~~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~ 212 (451)
.+..+.++...+|+++|+++.+.+.+++++||++|+..++..+.. ++|+||+.++.|++.........
T Consensus 57 ~y~r~~~p~~~~le~~lA~l~g~~~~i~~ssG~~Ai~~~l~all~-----------~GD~Vi~~~~~y~~~~~~~~~~~- 124 (398)
T PRK08249 57 IYSRNTNPTVQAFEEKVRILEGAEAATAFSTGMAAISNTLYTFLK-----------PGDRVVSIKDTYGGTNKIFTEFL- 124 (398)
T ss_pred cccCCCChHHHHHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhcC-----------CCCEEEEcCCchHHHHHHHHHHH-
Confidence 345566777899999999999988899999999999999886541 68999999999976432111100
Q ss_pred CCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCC
Q 013008 213 KEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGL 292 (451)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~ 292 (451)
......+.+++..|++++++++++ ++++|++|.++++.|.+.+ +++|.++|++||+++|+|++|..+
T Consensus 125 --------~~~Gi~v~~vd~~d~e~l~~~i~~-~tklV~ie~p~NPtg~v~d----l~~I~~la~~~gi~livD~t~a~~ 191 (398)
T PRK08249 125 --------PRMGVDVTLCETGDHEQIEAEIAK-GCDLLYLETPTNPTLKIVD----IERLAAAAKKVGALVVVDNTFATP 191 (398)
T ss_pred --------hhCCeEEEEcCCCCHHHHHHhcCC-CCeEEEEECCCCCCCccCC----HHHHHHHHHHcCCEEEEECCcCcc
Confidence 001122344555689999999975 5788888877777787776 999999999999999999999643
Q ss_pred CcccccccccccCCCccee--eecccccC-Cccc-ccccccHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcC--hH
Q 013008 293 GRTGYLWAHEHYGIFPDIM--TLAKPLAG-GLPI-GAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISN--PA 366 (451)
Q Consensus 293 gr~G~~~~~~~~~~~pdi~--t~sK~lg~-G~~i-G~v~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~ 366 (451)
..... .....|++ +++|.++| |..+ |++++++++++.+...........+|+.++.++..++.+.. +.
T Consensus 192 -~~~~~-----l~~~~Divv~S~sK~l~g~~~~~gG~vv~~~~l~~~l~~~~~~~g~~~s~~~a~l~l~~l~tL~~R~~~ 265 (398)
T PRK08249 192 -INQNP-----LALGADLVIHSATKFLSGHADALGGVVCGSKELMEQVYHYREINGATMDPMSAYLILRGMKTLKLRVRQ 265 (398)
T ss_pred -ccCCc-----hhhCCCEEeccCceecCCCCCceEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHhCcchHHHHHHH
Confidence 11111 12235555 67899986 5444 77778888888775433334455678887777776665421 11
Q ss_pred H------HHHHHhCCCCcce------------------ecccceeEEEEecCC---hHHHHHHHH--HCCce-------e
Q 013008 367 F------LASKLARNPHVKD------------------VRGLGLIIGIEFDVS---ATPVVDACR--DSGLL-------V 410 (451)
Q Consensus 367 ~------~~~~~~~~~~~~~------------------v~g~G~~~~~~~~~~---~~~~~~~l~--~~Gv~-------~ 410 (451)
. +.+.++.+|.+.. ..|.|.++.|+++.. ..+|.+.|. ..++- +
T Consensus 266 ~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~sf~~~~~~~~~~~f~~~l~l~~~~~s~G~~~sl~ 345 (398)
T PRK08249 266 QQESAMALAKYLQTHPKVEAVYYPGLETHPNHEIAKAQMRGFGGILSFVLKGGMDTVKRLLPKLRYAHRAANLGAVETIY 345 (398)
T ss_pred HHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEEcCCHHHHHHHHHhCCcceEccCCCCCCcee
Confidence 1 1113445553332 235688889988532 223333321 11211 1
Q ss_pred e-ec---------------C-CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHhh
Q 013008 411 L-TA---------------G-KGNVVRLVPPLIISEQELDQAVEILCKTLPVLDS 448 (451)
Q Consensus 411 ~-~~---------------~-~~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~~~ 448 (451)
. |. | .++.+|+++.+ |+.+.+++.|+++|+.+++
T Consensus 346 ~~~~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al~~~~~ 396 (398)
T PRK08249 346 GPARTTSHVENTLEERAALGIPEGLVRISVGI----EDTEDLIADLEQAFAHLES 396 (398)
T ss_pred eCCcccccccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHHHhhh
Confidence 1 11 0 12568886554 5677788888888876553
No 246
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.78 E-value=2e-17 Score=164.30 Aligned_cols=277 Identities=15% Similarity=0.160 Sum_probs=177.2
Q ss_pred ccCCCCCHHHHHHHHHHhhccCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccC
Q 013008 133 VSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTS 212 (451)
Q Consensus 133 ~~~~~~~~~~~~l~~~l~~~~~~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~ 212 (451)
.+..+.++...+|+++|+++.+.+..++++||++|+..++.++. ++++||+.++.|++.........
T Consensus 45 ~y~r~~~pt~~~le~~la~l~g~~~~~~~~sG~~ai~~~~~ll~------------~Gd~Vl~~~~~y~~t~~~~~~~~- 111 (366)
T PRK08247 45 DYSRTGNPTRGVLEQAIADLEGGDQGFACSSGMAAIQLVMSLFR------------SGDELIVSSDLYGGTYRLFEEHW- 111 (366)
T ss_pred cccCCCCchHHHHHHHHHHHhCCCcEEEEcCHHHHHHHHHHHhC------------CCCEEEEecCCcCcHHHHHHHHh-
Confidence 34566777799999999999998778999999999987764322 58999999999987532221110
Q ss_pred CCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEecccc-C
Q 013008 213 KEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQC-G 291 (451)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-g 291 (451)
......+.+++..|++++++++++ ++++|++|.++++.| +...+++|.++|++||+++|+||+|. +
T Consensus 112 --------~~~G~~v~~vd~~d~~~l~~~i~~-~tklv~le~P~NP~~----~~~dl~~I~~la~~~g~~lIvD~t~~~~ 178 (366)
T PRK08247 112 --------KKWNVRFVYVNTASLKAIEQAITP-NTKAIFIETPTNPLM----QETDIAAIAKIAKKHGLLLIVDNTFYTP 178 (366)
T ss_pred --------hccCceEEEECCCCHHHHHHhccc-CceEEEEECCCCCCC----cHHHHHHHHHHHHHcCCEEEEECCCccc
Confidence 011234556666799999999975 577888876665544 34459999999999999999999983 2
Q ss_pred CCcccccccccccCCCcceeeecccccC--Cccccccccc-HHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcC--hH
Q 013008 292 LGRTGYLWAHEHYGIFPDIMTLAKPLAG--GLPIGAALVT-EKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISN--PA 366 (451)
Q Consensus 292 ~gr~G~~~~~~~~~~~pdi~t~sK~lg~--G~~iG~v~~~-~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~ 366 (451)
+ ..... ..+...-+.+++|.++| ++..|+++++ +++++.+.......+...+|+.+..+...|+.+.. +.
T Consensus 179 ~--~~~p~---~~g~di~i~S~sK~~~g~~d~~~G~iv~~~~~l~~~~~~~~~~~g~~~s~~~a~l~~~~l~tl~~r~~~ 253 (366)
T PRK08247 179 V--LQRPL---EEGADIVIHSATKYLGGHNDVLAGLVVAKGQELCERLAYYQNAAGAVLSPFDSWLLIRGMKTLALRMRQ 253 (366)
T ss_pred c--ccCch---hcCCcEEEeecceeccCCCceeeeEEecChHHHHHHHHHHHHhcCCCCChHHHHHHHhccCcHHHHHHH
Confidence 2 11111 12322233478899986 3788998886 67777664333333445677777777666543211 11
Q ss_pred ------HHHHHHhCCCCcce--ecccceeEEEEecCChHHHHHHHHH--------------CCceeeecC----------
Q 013008 367 ------FLASKLARNPHVKD--VRGLGLIIGIEFDVSATPVVDACRD--------------SGLLVLTAG---------- 414 (451)
Q Consensus 367 ------~~~~~~~~~~~~~~--v~g~G~~~~~~~~~~~~~~~~~l~~--------------~Gv~~~~~~---------- 414 (451)
.+.+.++.+|.+.. .++.|.++.|+++. .+...++++ +.+++.|..
T Consensus 254 ~~~~a~~l~~~L~~~p~v~~v~~P~~gg~~sf~~~~--~~~~~~~~~~l~~~~~~~slg~~~sl~~~p~~~~~~~~~~~~ 331 (366)
T PRK08247 254 HEENAKAIAAFLNEQPGVTDVLYPGRGGMLSFRLQD--EEWVNPFLKSLKLITFAESLGGVESFITYPATQTHADIPEEI 331 (366)
T ss_pred HHHHHHHHHHHHHhCCCeeEEecCCcCcEEEEEECC--HHHHHHHHHcCCcceEccCCCCCceEEECCcccccccCCHHH
Confidence 11115566776654 44578888888742 222222222 123333321
Q ss_pred ------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 013008 415 ------KGNVVRLVPPLIISEQELDQAVEILCKTLPVL 446 (451)
Q Consensus 415 ------~~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~ 446 (451)
..+.+|++..+ |+++.+++.|+++|+++
T Consensus 332 r~~~gi~~~~~R~svGl----E~~~dl~~dl~~al~~~ 365 (366)
T PRK08247 332 RIANGVCNRLLRFSVGI----ENVEDLIADLKQAFKQV 365 (366)
T ss_pred HHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHhhc
Confidence 02467886554 56777888888887653
No 247
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.78 E-value=1.2e-16 Score=159.99 Aligned_cols=313 Identities=17% Similarity=0.123 Sum_probs=186.6
Q ss_pred EEeeccCcccccCCCCCHHHHHHHHHHHhhcccccCC---CCCHHHHHHHHHHhhc---cC---CCeEEecCCHHHHHHH
Q 013008 100 YLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNM---YYSIPQIELAKRLVAC---SF---ADRVFFSNTGTEANEA 170 (451)
Q Consensus 100 ~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~---~~~~~~~~l~~~l~~~---~~---~e~v~~~~sG~eA~~~ 170 (451)
|+|..+.. ..++.|.+++.+.++.....+.. +.......+.+.+++. ++ .++|+|++|++||+..
T Consensus 2 yld~aa~~------~~~~~v~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~i~~t~g~teal~~ 75 (382)
T TIGR03403 2 YLDNNATT------MLDPKVKELMDPFFCDIYGNPNSLHQFGTATHPAIAEALDKLYKGINARDLDDIIITSCATESNNW 75 (382)
T ss_pred cccCcCCC------CCCHHHHHHHHHHHHhcCcCCccccHHHHHHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHHH
Confidence 56655543 36789999999988753221111 1112233444444333 32 5789999999999999
Q ss_pred HHHHHHH-Hh-hhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCC-----CHHHHHHhcC
Q 013008 171 AIKFARK-FQ-RHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYG-----NIEATRKLIQ 243 (451)
Q Consensus 171 al~~a~~-~~-~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~le~~l~ 243 (451)
+++.+.. .. . +++++|++....|+........+.. ....+..+|.+ |+++|++.+.
T Consensus 76 ~~~~~~~~~~~~-------~~~~~vi~~~~e~ps~~~~~~~~~~----------~G~~v~~v~~~~~g~~d~~~l~~~i~ 138 (382)
T TIGR03403 76 VLKGVYFDEILK-------GGKNHIITTEVEHPAVRATCAFLES----------LGVEVTYLPINEQGTITAEQVREAIT 138 (382)
T ss_pred HHHHHHHhhccc-------CCCCEEEEcCCccHHHHHHHHHHHH----------CCCEEEEEecCCCCCCCHHHHHHhcc
Confidence 9986531 00 1 1245677776544333221111100 00112222221 7899999986
Q ss_pred CCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccccccCCCcceeeec--ccccCCc
Q 013008 244 PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLA--KPLAGGL 321 (451)
Q Consensus 244 ~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~t~s--K~lg~G~ 321 (451)
+ ++++|++..+++++|.+.+ +++|.++|++||+++|+|+++. +|.. . .+.....+|++++| |.+|. .
T Consensus 139 ~-~t~lv~~~~~~n~tG~~~~----~~~I~~la~~~g~~~ivD~a~~-~g~~--~--~~~~~~~~D~~~~s~~K~~gp-~ 207 (382)
T TIGR03403 139 E-KTALVSVMWANNETGMIFP----IKEIGEICKERGVLFHTDAVQA-IGKI--P--VDVQKAGVDFLSFSAHKFHGP-K 207 (382)
T ss_pred c-CCeEEEEEcccCCCccccC----HHHHHHHHHHcCCEEEEechhh-cCCC--c--cCccccCCCEEEEcchhhCCC-C
Confidence 5 4577777777778888777 8899999999999999999985 4321 1 12223357888777 96542 2
Q ss_pred ccccccccHHHHhhccCCC-------ccCCCCCcHHHHHHHHHHHHHhcC--hHHHHH-------H---HhCCCCcceec
Q 013008 322 PIGAALVTEKVASAINYGD-------HGSTFAGSPLVCNAAIAVLDKISN--PAFLAS-------K---LARNPHVKDVR 382 (451)
Q Consensus 322 ~iG~v~~~~~i~~~~~~~~-------~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~-------~---~~~~~~~~~v~ 382 (451)
.+|++..+++.. +.+.. .....+.|.+++.++.++++.+.+ +...++ + ++.++.+..+.
T Consensus 208 G~g~l~vr~~~~--~~p~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~ 285 (382)
T TIGR03403 208 GVGGLYIRKGVE--LTPLFHGGEHMGGRRSGTLNVPYIVAMGEAMRLANEYLDFEKSHVRRLRDRLEDALLELPDVFVVG 285 (382)
T ss_pred ceEEEEECCCCC--CCCcccCCCCCCCcccCCcChHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCEEEEC
Confidence 256666554421 11110 011234566777677777765432 111111 2 23345443332
Q ss_pred cc----ceeEEEEec-CChHHHHHHHHHCCceeeecC-----------------C-----CCEEEEeCCCCCCHHHHHHH
Q 013008 383 GL----GLIIGIEFD-VSATPVVDACRDSGLLVLTAG-----------------K-----GNVVRLVPPLIISEQELDQA 435 (451)
Q Consensus 383 g~----G~~~~~~~~-~~~~~~~~~l~~~Gv~~~~~~-----------------~-----~~~iri~~~~~~t~e~i~~~ 435 (451)
+. ..++.+.++ .....+...|.++||.+..+. . +..+|+++....|++|||++
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~v~~~~g~~~~~~~~~iR~s~~~~~t~~did~~ 365 (382)
T TIGR03403 286 DREHRVPNTILISIKGVEGEAMLWDLNKAGIAASTGSACASEDLEANPVMVAIGADKELAHTAIRLSLSRFTTEEEIDYT 365 (382)
T ss_pred CCCCCcCCEEEEEeCCCCHHHHHHhhccCCEEEEchhccCCCCCCcCHHHHHcCCChHHhCeeEEEECCCCCCHHHHHHH
Confidence 21 334455553 356778888889999998421 0 24699999999999999999
Q ss_pred HHHHHHHHHHHhh
Q 013008 436 VEILCKTLPVLDS 448 (451)
Q Consensus 436 l~~l~~~l~~~~~ 448 (451)
++.|++++++++.
T Consensus 366 ~~~l~~~~~~~~~ 378 (382)
T TIGR03403 366 IEVFKKAVQRLRA 378 (382)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999988764
No 248
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.78 E-value=2.2e-16 Score=159.12 Aligned_cols=314 Identities=16% Similarity=0.145 Sum_probs=189.2
Q ss_pred CEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccCC-CC------CHHHHHHHHHHhhccC--CCeEEecCCHHHHH
Q 013008 98 REYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNM-YY------SIPQIELAKRLVACSF--ADRVFFSNTGTEAN 168 (451)
Q Consensus 98 ~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~-~~------~~~~~~l~~~l~~~~~--~e~v~~~~sG~eA~ 168 (451)
+-|+|..+. +..++.+.+++.+.+......... .+ .....++.+.+++.++ .+.|+|++|+++|+
T Consensus 4 ~~yld~aa~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~ 77 (402)
T TIGR02006 4 PIYLDYAAT------TPVDPRVAEKMMPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAELIGADSREIVFTSGATESN 77 (402)
T ss_pred cEEeeCCcC------CCCCHHHHHHHHHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHH
Confidence 468887653 346899999998887543111111 11 1225567788888887 56899999999999
Q ss_pred HHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeC-----CCHHHHHHhcC
Q 013008 169 EAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEY-----GNIEATRKLIQ 243 (451)
Q Consensus 169 ~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~le~~l~ 243 (451)
..+++.+..+.. .++++||+..+.| .............. ..+..++. .|++++++++.
T Consensus 78 ~~~l~~l~~~~~-------~~g~~Vi~~~~~h-~s~~~~~~~~~~~g---------~~v~~v~~~~~~~~d~~~l~~~l~ 140 (402)
T TIGR02006 78 NLAIKGIAHFYK-------SKGNHIITSKTEH-KAVLDTCRYLEREG---------FEVTYLPPKSNGLIDLEELKAAIR 140 (402)
T ss_pred HHHHHHHHHhhc-------CCCCEEEECCCcc-HHHHHHHHHHHhcC---------CEEEEEccCCCCcCCHHHHHHhcC
Confidence 999887653211 1467777776654 43332221100000 11222221 27899999986
Q ss_pred CCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccccccCCCcceeeec--ccccCCc
Q 013008 244 PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLA--KPLAGGL 321 (451)
Q Consensus 244 ~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~t~s--K~lg~G~ 321 (451)
+ ++++|++..+++++|.+.+ +++|.++|++||+++|+|++|+ +|.. ..+..+..+|++++| |.+| ..
T Consensus 141 ~-~~~lv~v~~~~n~tG~~~~----~~~I~~l~~~~g~~livD~a~a-~g~~----~~~~~~~~~D~~~~s~~K~~g-p~ 209 (402)
T TIGR02006 141 D-DTILVSIMHVNNEIGVIQD----IAAIGEICRERKVFFHVDAAQS-VGKI----PINVNELKVDLMSISGHKIYG-PK 209 (402)
T ss_pred C-CCEEEEEECCCcCceeccc----HHHHHHHHHHcCCEEEEEcchh-cCCc----ccCccccCCCEEEEehhhhcC-CC
Confidence 5 5778888888888888877 9999999999999999999995 4322 122234568999988 9664 23
Q ss_pred ccccccccHHHHhhccCCCcc-------CCCCCcHHHHHHHHHHHHHhcCh--HHHHH-------HH---hCCCCccee-
Q 013008 322 PIGAALVTEKVASAINYGDHG-------STFAGSPLVCNAAIAVLDKISNP--AFLAS-------KL---ARNPHVKDV- 381 (451)
Q Consensus 322 ~iG~v~~~~~i~~~~~~~~~~-------~t~~~~~~~~aaa~aal~~~~~~--~~~~~-------~~---~~~~~~~~v- 381 (451)
.+|+++.+++....+.+...+ ...+.+...+.+..++++.+... ...++ +. +.++.+...
T Consensus 210 G~G~l~~~~~~~~~~~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~v~~~~ 289 (402)
T TIGR02006 210 GIGALYVRRKPRVRLEALIHGGGHERGMRSGTLPTHQIVGMGEAFRIAKEEMAQDTAHVLALRDRLLNGIKSIEEVYLNG 289 (402)
T ss_pred ceEEEEEccCCCCCCCceecCCCccCCccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCEEEeC
Confidence 588888776544444332111 11123455555665777765421 11111 22 234433211
Q ss_pred --ccc-ceeEEEEec-CChHHHHHHHHHCCceeeecC----------------------CCCEEEEeCCCCCCHHHHHHH
Q 013008 382 --RGL-GLIIGIEFD-VSATPVVDACRDSGLLVLTAG----------------------KGNVVRLVPPLIISEQELDQA 435 (451)
Q Consensus 382 --~g~-G~~~~~~~~-~~~~~~~~~l~~~Gv~~~~~~----------------------~~~~iri~~~~~~t~e~i~~~ 435 (451)
... ...+.+.|. .....+...+ +++.+..+. ..+.+|+++....|+||+|++
T Consensus 290 ~~~~~~p~~~~v~f~~~~~~~~~~~l--~~i~v~~G~~c~~~~~~~~~~l~~lg~~~~~~~~~vR~S~~~~~t~edid~l 367 (402)
T TIGR02006 290 DLEHRVPGNLNVSFNYVEGESLIMAL--KDLAVSSGSACTSASLEPSYVLRALGINDELAHSSIRFTIGRFTTEEEIDYA 367 (402)
T ss_pred CccccCCCeEEEEEeCcCHHHHHHhc--CCEEEechhhcCCCCCCccHHHHHcCCChhhcCceEEEEecCCCCHHHHHHH
Confidence 001 011123332 3344554444 354433210 025789999999999999999
Q ss_pred HHHHHHHHHHHh
Q 013008 436 VEILCKTLPVLD 447 (451)
Q Consensus 436 l~~l~~~l~~~~ 447 (451)
++.|+++++.++
T Consensus 368 ~~~l~~~~~~~~ 379 (402)
T TIGR02006 368 VKLVKSAIDKLR 379 (402)
T ss_pred HHHHHHHHHHHH
Confidence 999999987764
No 249
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.77 E-value=8.7e-17 Score=161.25 Aligned_cols=322 Identities=13% Similarity=0.104 Sum_probs=188.2
Q ss_pred cCCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHhhccCCCeEEecCCHHHHHHHHHHH
Q 013008 95 AEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKF 174 (451)
Q Consensus 95 ~~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~e~v~~~~sG~eA~~~al~~ 174 (451)
..|.-||||.+-.++ ..+.+++.+++..... .+.......+|++.++++++.+.+++++||++|+..++++
T Consensus 17 ~~~~v~iDlltds~t-------~ams~~~~~a~~~gd~--~Y~~~~g~~~Leeaia~~~g~~~vv~t~~Gt~Al~la~~a 87 (431)
T cd00617 17 RSEDVYIDLLTDSGT-------GAMSDYQWAAMMLGDE--AYAGSKSFYDLEDAVQDLFGFKHIIPTHQGRGAENILFSI 87 (431)
T ss_pred CCCCcCCCCCCCCCc-------HHHHHHHHHHHHhCCC--ccCCCCCHHHHHHHHHHHHCCCeEEEcCCHHHHHHHHHHH
Confidence 356788999886553 3444555555544322 1223444779999999999999999999999999999986
Q ss_pred HHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCe---eEeeC---CCHHHHHHhcCCC---
Q 013008 175 ARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGV---NFVEY---GNIEATRKLIQPG--- 245 (451)
Q Consensus 175 a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~---~d~~~le~~l~~~--- 245 (451)
+. +++|.| ..++.|..+.......++.+... +..+.. ...|+ -|++.|++++.+.
T Consensus 88 l~-----------~pGD~V-~~~~~f~~~~~~i~~~Ga~pv~v----~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~~~ 151 (431)
T cd00617 88 LL-----------KPGRTV-PSNMHFDTTRGHIEANGAVPVDL----VIDEAHDAQELIPFKGNIDVAKLEKLIDEVGAE 151 (431)
T ss_pred hC-----------CCCCEE-ccCCcccchHHHHHhCCCEeEEE----ecccccccccccCCCCCcCHHHHHHHhCcccCC
Confidence 64 257765 57777765543333333332211 111110 00111 2899999999743
Q ss_pred CeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCC----------CcccccccccccCCCcceeeecc
Q 013008 246 KTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGL----------GRTGYLWAHEHYGIFPDIMTLAK 315 (451)
Q Consensus 246 ~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~----------gr~G~~~~~~~~~~~pdi~t~sK 315 (451)
++++|+++..++..|+.+.+.+.+++|+++|++||++||.|+++.-. |+.+.... .+...+.++||
T Consensus 152 ~~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~~~~si~----ei~~e~~s~sd 227 (431)
T cd00617 152 NIPYIVLTITNNTAGGQPVSMANLREVRELAHKYGIPVVLDAARFAENAYFIKEREEGYRDKSIA----EIAREMFSYAD 227 (431)
T ss_pred CccEEEEECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhcccccccCCCHH----HHHHHhhccCC
Confidence 36777776444443335789999999999999999999999996411 11111100 11111223444
Q ss_pred cccC-C-----cc-cccccccH-HHHhhccCC----CccCCCCC-cHHHHHHHHHHHHHhcChHHHHH----------HH
Q 013008 316 PLAG-G-----LP-IGAALVTE-KVASAINYG----DHGSTFAG-SPLVCNAAIAVLDKISNPAFLAS----------KL 372 (451)
Q Consensus 316 ~lg~-G-----~~-iG~v~~~~-~i~~~~~~~----~~~~t~~~-~~~~~aaa~aal~~~~~~~~~~~----------~~ 372 (451)
++.. | .+ .|++++++ ++++.++.. ....++++ ++--++|...+|+...+.+++++ .+
T Consensus 228 ~~~mS~~K~~~~~~GG~i~~~d~~l~~~~~~~~~~~~~~~~~gG~~~r~~~A~A~gL~e~~~~~~l~~~~~~r~~l~~~L 307 (431)
T cd00617 228 GCTMSAKKDGLVNIGGFLALRDDELYEEARQRVVLYEGFVTYGGMAGRDMEALAQGLREAVEEDYLRHRVEQVRYLGDRL 307 (431)
T ss_pred EEEEEeecCCCCccceEEEeCcHHHHHHHHHhccccCCccccccccHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 3321 2 23 45788875 688877531 11123333 23333333225543222232222 22
Q ss_pred h--CCCCcceecccceeEEEEec----------CChHHHHHHHH-HCCceeeec-----------C-----CCCEEEEeC
Q 013008 373 A--RNPHVKDVRGLGLIIGIEFD----------VSATPVVDACR-DSGLLVLTA-----------G-----KGNVVRLVP 423 (451)
Q Consensus 373 ~--~~~~~~~v~g~G~~~~~~~~----------~~~~~~~~~l~-~~Gv~~~~~-----------~-----~~~~iri~~ 423 (451)
+ .+|.+ .+..|.+++++.. .++..|+.+|+ +.||.+... + ..+.+|+.+
T Consensus 308 ~~~G~~v~--~P~Ggh~v~~d~~~~~~~~~~~~~~~~~la~~L~~e~gV~~~~~g~~~~~~~~~~~~~~~~~~~~~rl~~ 385 (431)
T cd00617 308 DEAGVPIV--EPAGGHAVFIDAREFLPHIPQEQFPAQALAAELYLEAGVRAVELGIFSAGRDPNTGENKYPELELVRLAI 385 (431)
T ss_pred HHCCCCcc--CCCcceEEEEEhHHhcCCCCcccCcHHHHHHHHHHHcCeeEEeecceecccCCCCCcccCCccceeEEec
Confidence 2 23322 2344566677653 13677887776 457775421 1 025689987
Q ss_pred CC-CCCHHHHHHHHHHHHHHHHHHh
Q 013008 424 PL-IISEQELDQAVEILCKTLPVLD 447 (451)
Q Consensus 424 ~~-~~t~e~i~~~l~~l~~~l~~~~ 447 (451)
|- ..|.+++|.++++|.++.++-.
T Consensus 386 prr~~t~~~~~~~~~~~~~~~~~~~ 410 (431)
T cd00617 386 PRRVYTQDHMDYVAAAVIALYERRE 410 (431)
T ss_pred cccccCHHHHHHHHHHHHHHHhhHh
Confidence 75 7799999999999999887643
No 250
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.77 E-value=8.3e-17 Score=162.29 Aligned_cols=316 Identities=18% Similarity=0.173 Sum_probs=179.0
Q ss_pred CEEEeeccCcccccCCCCCHHHHHHHHHHH-hhcccc---cCCC-CCHHH---HH-HHHHHhhccCCCe-EEecCCHHHH
Q 013008 98 REYLDLSSGIAVNALGHGDADWIKAVVDQA-NVLTHV---SNMY-YSIPQ---IE-LAKRLVACSFADR-VFFSNTGTEA 167 (451)
Q Consensus 98 ~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~-~~~~~~---~~~~-~~~~~---~~-l~~~l~~~~~~e~-v~~~~sG~eA 167 (451)
+++|.+..+.. .-+|.|++++.+.+ .++..+ +..+ ..+.. ++ .++.++++++.+. .++.+||++|
T Consensus 19 ~~~~~~~~~~~-----~~~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~v~~~sgt~a 93 (402)
T cd00378 19 RETLELIASEN-----FTSPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGAEYANVQPHSGSQA 93 (402)
T ss_pred HhCeeeeccCC-----cCCHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCCCceeeecCCcHHH
Confidence 45677766544 24899999998765 333211 1111 22222 23 2334567777443 2444578999
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhh----hhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcC
Q 013008 168 NEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGA----LALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQ 243 (451)
Q Consensus 168 ~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~ 243 (451)
+..+++.+. .++|+|++.++.|.+..... ....+.... ..+...+.. -..-|++++++.+.
T Consensus 94 ~~~~l~~l~-----------~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~-~~~id~~~l~~~i~ 158 (402)
T cd00378 94 NLAVYFALL-----------EPGDTIMGLDLSHGGHLTHGSFTKVSASGKLFE---SVPYGVDPE-TGLIDYDALEKMAL 158 (402)
T ss_pred HHHHHHHhc-----------CCCCEEEEecCccCccccccccccccccceeEE---EecCCcCcc-cCCcCHHHHHHHHH
Confidence 999998764 16899999999987653221 111111000 001100000 00028999999986
Q ss_pred CCCeEEEEE-ccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccc-cCCCcccccccccccCCCccee--eecccccC
Q 013008 244 PGKTAAVFV-EPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQ-CGLGRTGYLWAHEHYGIFPDIM--TLAKPLAG 319 (451)
Q Consensus 244 ~~~~aavi~-ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~-tg~gr~G~~~~~~~~~~~pdi~--t~sK~lg~ 319 (451)
..++++|++ .|.++ ...+ +++|.++|++||+++|+||+| .|+...|... .... ..|++ +++|++ +
T Consensus 159 ~~~~~~v~~~~~~~~---~~~~----~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~--~~~~-~~dv~~~s~sK~l-~ 227 (402)
T cd00378 159 EFKPKLIVAGASAYP---RPID----FKRFREIADEVGAYLLVDMAHVAGLVAGGVFP--NPLP-GADVVTTTTHKTL-R 227 (402)
T ss_pred hCCCCEEEecCcccC---CCcC----HHHHHHHHHhcCCEEEEEccchhhhhhcccCC--Cccc-CCcEEEeccccCC-C
Confidence 334555554 55433 2334 899999999999999999996 4442223211 1111 24654 678999 5
Q ss_pred CcccccccccH-HHHhhccCCCccCCCCCc-HHHHHHHHHHHHHhcC---hHHHHH----------HHhCCCCccee--c
Q 013008 320 GLPIGAALVTE-KVASAINYGDHGSTFAGS-PLVCNAAIAVLDKISN---PAFLAS----------KLARNPHVKDV--R 382 (451)
Q Consensus 320 G~~iG~v~~~~-~i~~~~~~~~~~~t~~~~-~~~~aaa~aal~~~~~---~~~~~~----------~~~~~~~~~~v--~ 382 (451)
|+++|++++++ ++++.+......+.++.+ +...+++..++..+.. +++.++ .++.++ +..+ .
T Consensus 228 G~~gg~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~ 306 (402)
T cd00378 228 GPRGGLILTRKGELAKKINSAVFPGLQGGPHLHVIAAKAVALKEALEPEFKAYAKQVVENAKALAEALKERG-FKVVSGG 306 (402)
T ss_pred CCCceEEEeccHHHHHHHHHHhCccccCCchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhCC-CeEeecC
Confidence 68899999876 888877533222223322 2233332333332222 122222 222332 2212 1
Q ss_pred ccceeEEEEec---CChHHHHHHHHHCCceeeec----C-----CCCEEEEeCCC----CCCHHHHHHHHHHHHHHHHH
Q 013008 383 GLGLIIGIEFD---VSATPVVDACRDSGLLVLTA----G-----KGNVVRLVPPL----IISEQELDQAVEILCKTLPV 445 (451)
Q Consensus 383 g~G~~~~~~~~---~~~~~~~~~l~~~Gv~~~~~----~-----~~~~iri~~~~----~~t~e~i~~~l~~l~~~l~~ 445 (451)
..+.++|+.+. .....+.+.|.++||.+.+. . ....+|++++. .++++|++++++.|.+++++
T Consensus 307 ~~~~~v~v~~~~~~~~~~~~~~~l~~~gI~v~~~~~p~~~~~~~~~~~lRi~~~~~~~~~~~~~di~~~~~~l~~~~~~ 385 (402)
T cd00378 307 TDNHLVLVDLRPKGITGKAAEDALEEAGITVNKNTLPWDPSSPFVPSGIRIGTPAMTTRGMGEEEMEEIADFIARALKD 385 (402)
T ss_pred CCCeEEEEeCCccCCCHHHHHHHHHHcCcEEcCCcCCCCCCCCCCCCeeEecCHHHHHhCCCHHHHHHHHHHHHHHHhc
Confidence 34677778774 23456777777889999632 1 12468987765 35799999999999998764
No 251
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.77 E-value=1.3e-16 Score=160.99 Aligned_cols=311 Identities=20% Similarity=0.165 Sum_probs=184.1
Q ss_pred CCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccC-CC------CCHHHHHHHHHHhhccC--CCeEEecCCHHHH
Q 013008 97 GREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSN-MY------YSIPQIELAKRLVACSF--ADRVFFSNTGTEA 167 (451)
Q Consensus 97 G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~-~~------~~~~~~~l~~~l~~~~~--~e~v~~~~sG~eA 167 (451)
+.-|+|..+ +|..++.+.+++.+.++.+..... .. ......++ +++ ++++ .++|+|++|++++
T Consensus 27 ~~iyld~~a------~g~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~l~g~~~~~v~~~~~~t~~ 98 (406)
T TIGR01814 27 AVIYLDGNS------LGLMPKAARNALKEELDKWAKIAIRGHNTGKAPWFTLDESL-LKL-RLVGAKEDEVVVMNTLTIN 98 (406)
T ss_pred CcEEecCCC------cCcCcHHHHHHHHHHHHHHHHhhhccCccCCCChhhhhhhh-ccc-cccCCCCCcEEEeCCchHH
Confidence 456776443 444678888999887765432211 10 11112333 334 5666 6789999999999
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhh----ccCCCCcCCCCcCCCCCeeEeeC-----CCHHHH
Q 013008 168 NEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALA----LTSKEHYRSPFEPVMPGVNFVEY-----GNIEAT 238 (451)
Q Consensus 168 ~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l 238 (451)
+..+++.+... + ++++.|++.+..| ++....+. ..+... . .-...++. -|++++
T Consensus 99 l~~~~~~~~~~-~-------~~~~~i~~~~~~~-~s~~~~~~~~~~~~g~~~-~-------~~~~~~~~~~~g~~~~~~l 161 (406)
T TIGR01814 99 LHLLLASFYKP-T-------PKRYKILLEAKAF-PSDHYAIESQLQLHGLTV-E-------ESMVQIEPREEETLRLEDI 161 (406)
T ss_pred HHHHHHHhcCC-c-------CCccEEEecCCCC-ChHHHHHHHHHHhcCCCc-c-------cceEEeccCCCCccCHHHH
Confidence 99998865210 0 0123455444554 44222221 111110 0 00011111 167888
Q ss_pred HHhcC--CCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccccccCCCcceee--ec
Q 013008 239 RKLIQ--PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMT--LA 314 (451)
Q Consensus 239 e~~l~--~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~t--~s 314 (451)
++.++ .+++++|+++.+++++|.+.| +++|.++|++||+++|+|++|+ +|.. .+....++ +|+++ .-
T Consensus 162 ~~~~~~~~~~t~lv~~~~v~~~tG~~~~----~~~i~~~~~~~g~~~~vD~aq~-~G~~--~id~~~~g--vD~~~~s~h 232 (406)
T TIGR01814 162 LDTIEKNGDDIAVILLSGVQYYTGQLFD----MAAITRAAHAKGALVGFDLAHA-VGNV--PLDLHDWG--VDFACWCTY 232 (406)
T ss_pred HHHHHhcCCCeEEEEEeccccccceecC----HHHHHHHHHHcCCEEEEEcccc-cCCc--ccccccCC--CCEEEEcCc
Confidence 88775 357889999999999999888 9999999999999999999996 5432 12233334 56554 45
Q ss_pred ccccCCcccccccccHHHHhhccCC---Ccc----------CC----------CCCcHHHHHHHHHHHHHhcCh---HHH
Q 013008 315 KPLAGGLPIGAALVTEKVASAINYG---DHG----------ST----------FAGSPLVCNAAIAVLDKISNP---AFL 368 (451)
Q Consensus 315 K~lg~G~~iG~v~~~~~i~~~~~~~---~~~----------~t----------~~~~~~~~aaa~aal~~~~~~---~~~ 368 (451)
|.+.+|.. |++...++..+.+.+. ..+ .+ .+.|..++++..++|+.+.+. ...
T Consensus 233 K~l~g~pG-~~l~v~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~ 311 (406)
T TIGR01814 233 KYLNAGPG-AGAFVHEKHAHTERPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGSLDIFDQAGMEALR 311 (406)
T ss_pred cccCCCCC-eEEEEehhhhhhcCCCCCcccCCCCccccccccccCCCccceeeCCccHHHHHHHHHHHHHHHhcCHHHHH
Confidence 99876533 4444433322223221 000 00 123556777777888877443 222
Q ss_pred HH----------HHhCC----CCccee-----cccceeEEEEecCChHHHHHHHHHCCceeeecCCCCEEEEeC-CCCCC
Q 013008 369 AS----------KLARN----PHVKDV-----RGLGLIIGIEFDVSATPVVDACRDSGLLVLTAGKGNVVRLVP-PLIIS 428 (451)
Q Consensus 369 ~~----------~~~~~----~~~~~v-----~g~G~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~iri~~-~~~~t 428 (451)
++ .+++. +.+.-+ ...+.++.+.+.....++.+.|.++||.+..... +.+|+++ ++..|
T Consensus 312 ~~~~~l~~~l~~~l~~~~~~~~~~~i~~~~~~~~r~~~v~~~~~~~~~~~~~~L~~~gi~v~~~~~-~~iRiS~~~~~nt 390 (406)
T TIGR01814 312 KKSLLLTDYLEELIKARCGGPPVLTIITPRDHAQRGCQLSLTHPVPGKAVFQALIKRGVIGDKREP-SVIRVAPVPLYNT 390 (406)
T ss_pred HHHHHHHHHHHHHHHhhcCCCCceEEeCCCChhhcCCeEEEEecCCHHHHHHHHHHCCEEEeccCC-CeEEEechhccCC
Confidence 22 11221 212111 1234456666654577899999999998875443 6899999 58889
Q ss_pred HHHHHHHHHHHHHHH
Q 013008 429 EQELDQAVEILCKTL 443 (451)
Q Consensus 429 ~e~i~~~l~~l~~~l 443 (451)
++||++++++|++++
T Consensus 391 ~~did~l~~~l~~~~ 405 (406)
T TIGR01814 391 FVDVYDAVNVLEEIL 405 (406)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999998765
No 252
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.76 E-value=1.1e-16 Score=159.43 Aligned_cols=301 Identities=12% Similarity=0.074 Sum_probs=184.6
Q ss_pred CCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHhhccCC----CeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCC
Q 013008 115 GDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFA----DRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPA 190 (451)
Q Consensus 115 ~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~----e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~ 190 (451)
..|.+.+++.+.. .+... .+.....++.+.+++.++. +.+++++||+++++.++..+.. ++
T Consensus 16 ~~~~~~~a~~~~~---~~~~~-~~~~~~~~~~~~l~~l~~~~~~~~~i~~~~~gt~~l~~~~~~l~~-----------~~ 80 (368)
T PRK13479 16 TSRTVREAMLRDW---GSWDD-DFNALTASVRAKLVAIATGEEGYTCVPLQGSGTFSVEAAIGSLVP-----------RD 80 (368)
T ss_pred CCHHHHHHhCCCC---CCCCh-HHHHHHHHHHHHHHHHhCCCCCceEEEEcCCcHHHHHHHHHhccC-----------CC
Confidence 4566766665533 11111 1223477888888888872 3588999999999999987641 57
Q ss_pred ceEEEEcCCccCChh-hhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCC-CCeEEEEEccccCCCCccccCHHH
Q 013008 191 TEFVSFTNSFHGRTM-GALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQP-GKTAAVFVEPIQGEGGIYSATKEF 268 (451)
Q Consensus 191 ~~ii~~~~~yhg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~-~~~aavi~ep~~~~~G~~~~~~~~ 268 (451)
+++++.+++|++... ......+..... .+...+. ..|++++++.++. .++.+|++..+++++|...+
T Consensus 81 ~~vlv~~~~~~~~~~~~~~~~~g~~~~~---i~~~~~~----~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~---- 149 (368)
T PRK13479 81 GKVLVPDNGAYGARIAQIAEYLGIAHVV---LDTGEDE----PPDAAEVEAALAADPRITHVALVHCETTTGILNP---- 149 (368)
T ss_pred CeEEEEeCCchHHHHHHHHHHcCCcEEE---EECCCCC----CCCHHHHHHHHHhCCCCcEEEEEcccCccccccC----
Confidence 789888888877532 111111211100 1111110 1378999998863 24555555555566777777
Q ss_pred HHHHHHHHHHhCCEEEEeccccCCCcccccccccccCCCccee--eecccccCCcccccccccHHHHhhccCCCc-----
Q 013008 269 LQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIM--TLAKPLAGGLPIGAALVTEKVASAINYGDH----- 341 (451)
Q Consensus 269 l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~--t~sK~lg~G~~iG~v~~~~~i~~~~~~~~~----- 341 (451)
+++|.++|+++|+++|+|+++ .+|.. ...... ..+|++ +++|++.|..++|++++++++++.+.....
T Consensus 150 ~~~i~~l~~~~~~~livDa~~-~~g~~--~~~~~~--~~~d~~v~s~~K~l~g~~G~G~l~~~~~~~~~~~~~~~~~~~~ 224 (368)
T PRK13479 150 LDEIAAVAKRHGKRLIVDAMS-SFGAI--PIDIAE--LGIDALISSANKCIEGVPGFGFVIARRSELEACKGNSRSLSLD 224 (368)
T ss_pred HHHHHHHHHHcCCEEEEEccc-ccCCc--cccccc--cCceEEEecCccccccCCCceEEEECHHHHHHhhcCCCCeeec
Confidence 899999999999999999777 46532 122222 235655 567988754457999999988877653211
Q ss_pred ------------cCCCCCcHHHHHHHHHHHHHhcChH----HHHH----------HHhCCCCcceec---ccceeEEEEe
Q 013008 342 ------------GSTFAGSPLVCNAAIAVLDKISNPA----FLAS----------KLARNPHVKDVR---GLGLIIGIEF 392 (451)
Q Consensus 342 ------------~~t~~~~~~~~aaa~aal~~~~~~~----~~~~----------~~~~~~~~~~v~---g~G~~~~~~~ 392 (451)
...|+.+...+++..++++.+.+++ ..++ .++.++...... .......+.+
T Consensus 225 ~~~~~~~~~~~~~~~~t~~~~~~~~l~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~ 304 (368)
T PRK13479 225 LYDQWAYMEKTGQWRFTPPTHVVAAFYQALLELEEEGGVPARGARYANNQRTLVAGMRALGFEPLLDAEIQSPIIVTFHA 304 (368)
T ss_pred HHHHHhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcCCcccCCchhcCceEEEEEC
Confidence 1123556666667777777653322 1111 122222110001 0112233333
Q ss_pred c----CChHHHHHHHHHCCceeeecCC--CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 013008 393 D----VSATPVVDACRDSGLLVLTAGK--GNVVRLVPPLIISEQELDQAVEILCKTLPVL 446 (451)
Q Consensus 393 ~----~~~~~~~~~l~~~Gv~~~~~~~--~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~ 446 (451)
. .+..++.+.|.++||.+.++.. .+.+|++.....++||+++++++|+++++++
T Consensus 305 ~~~~~~~~~~l~~~L~~~gi~v~~g~~~~~~~iRis~~~~~t~edi~~~l~~L~~~l~~~ 364 (368)
T PRK13479 305 PADPAYDFKEFYERLKEQGFVIYPGKLTQVDTFRIGCIGDVDAADIRRLVAAIAEALYWM 364 (368)
T ss_pred CCCCCcCHHHHHHHHHHCCEEEecCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHHHc
Confidence 2 2457899999999999987632 2578997655679999999999999998765
No 253
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.76 E-value=3.9e-16 Score=158.07 Aligned_cols=317 Identities=16% Similarity=0.129 Sum_probs=177.5
Q ss_pred CEEEeeccCcccccCCCCCHHHHHHHHHHHh-hcccccC--CC--CCHHHHHHHH----HHhhccCCCeE-EecCCHHHH
Q 013008 98 REYLDLSSGIAVNALGHGDADWIKAVVDQAN-VLTHVSN--MY--YSIPQIELAK----RLVACSFADRV-FFSNTGTEA 167 (451)
Q Consensus 98 ~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~-~~~~~~~--~~--~~~~~~~l~~----~l~~~~~~e~v-~~~~sG~eA 167 (451)
+.+|++.++... -+|+|++|+...+. .+..+.. .+ .......+++ .+++.++.+.. ++++||++|
T Consensus 25 ~~~~~l~~~~n~-----~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~~~~i~~~sgt~a 99 (416)
T PRK00011 25 EEHIELIASENF-----VSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGAEYANVQPHSGSQA 99 (416)
T ss_pred hcCeeeecccCc-----CCHHHHHHHhchhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhCCCceeeecCCchHH
Confidence 456777776552 57999999877653 2221111 11 1222334433 67788874432 344578999
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhh--hccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCC
Q 013008 168 NEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGAL--ALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPG 245 (451)
Q Consensus 168 ~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~ 245 (451)
+..+++.+. + ++|+|++.++.|.+...... ...+. .......+..++. ...|+++++++++..
T Consensus 100 l~~~l~~l~---~--------~gd~Vl~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~---~~~d~~~l~~~i~~~ 164 (416)
T PRK00011 100 NAAVYFALL---K--------PGDTILGMDLAHGGHLTHGSPVNFSGK-LYNVVSYGVDEET---GLIDYDEVEKLALEH 164 (416)
T ss_pred HHHHHHHhc---C--------CCCEEEEeccccCCccccccccccccc-eeeEeecCcCccc---CCcCHHHHHHHHHhc
Confidence 999888663 1 68999999998865432111 11110 0000001111100 013899999999643
Q ss_pred CeEEEEEc-cccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccccccCCCccee--eecccccCCcc
Q 013008 246 KTAAVFVE-PIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIM--TLAKPLAGGLP 322 (451)
Q Consensus 246 ~~aavi~e-p~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~--t~sK~lg~G~~ 322 (451)
++++|++. +++ |...+ +++|.++|++||+++|+||+|. +|..+.+......+ ..|++ +++|+++ |.+
T Consensus 165 ~~k~v~~~~~~~---~~~~~----~~~I~~la~~~~~~livD~a~~-~g~~~~g~~~~~~~-~~di~~~S~~K~l~-g~~ 234 (416)
T PRK00011 165 KPKLIIAGASAY---SRPID----FKRFREIADEVGAYLMVDMAHI-AGLVAAGVHPSPVP-HADVVTTTTHKTLR-GPR 234 (416)
T ss_pred CCCEEEECCCcC---CCccC----HHHHHHHHHHcCCEEEEECcch-hcccccCccCCCCC-CCcEEEecCCcCCC-CCC
Confidence 55666663 433 33334 8999999999999999999984 22221110011112 34554 6789984 578
Q ss_pred ccccccc-HHHHhhccCCCccCCCCCc-HHHHHHHH-HHHHHhcC--hHHHHH----------HHhCCCCcceec--ccc
Q 013008 323 IGAALVT-EKVASAINYGDHGSTFAGS-PLVCNAAI-AVLDKISN--PAFLAS----------KLARNPHVKDVR--GLG 385 (451)
Q Consensus 323 iG~v~~~-~~i~~~~~~~~~~~t~~~~-~~~~aaa~-aal~~~~~--~~~~~~----------~~~~~~~~~~v~--g~G 385 (451)
+|+++++ +++.+.++.....++++.. ...+++.. +.++.+++ +++.++ .++..+ +.... ...
T Consensus 235 gg~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~ 313 (416)
T PRK00011 235 GGLILTNDEELAKKINSAVFPGIQGGPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEALAERG-FRVVSGGTDN 313 (416)
T ss_pred ceEEEeCCHHHHHHHHHHhCccccCCccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhCC-CeeeecCCCC
Confidence 8999985 6888877543222223222 22333333 33333221 122222 222222 21111 234
Q ss_pred eeEEEEec-C--ChHHHHHHHHHCCceeeecC---------CCCEEEEeCC----CCCCHHHHHHHHHHHHHHHHH
Q 013008 386 LIIGIEFD-V--SATPVVDACRDSGLLVLTAG---------KGNVVRLVPP----LIISEQELDQAVEILCKTLPV 445 (451)
Q Consensus 386 ~~~~~~~~-~--~~~~~~~~l~~~Gv~~~~~~---------~~~~iri~~~----~~~t~e~i~~~l~~l~~~l~~ 445 (451)
.++++.++ . ...++.+.|.++||.+.... .+..+|+... ..++++|++++++.|++++..
T Consensus 314 ~~~~i~~~~~~~~~~~~~~~L~~~GI~v~~~~~p~~~~~~~~~~~~Ri~~~~~~~~~~t~~di~~l~~~l~~~~~~ 389 (416)
T PRK00011 314 HLVLVDLRSKGLTGKEAEAALEEANITVNKNAVPFDPRSPFVTSGIRIGTPAITTRGFKEAEMKEIAELIADVLDN 389 (416)
T ss_pred eEEEEeCcccCCCHHHHHHHHHHcCcEEccCcCCCCCCCCCCCCceEecCHHHhhcCcCHHHHHHHHHHHHHHHhc
Confidence 66677663 2 45678888889999987321 0235787432 257899999999999998765
No 254
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.76 E-value=1.1e-16 Score=160.10 Aligned_cols=196 Identities=19% Similarity=0.184 Sum_probs=134.7
Q ss_pred cCCCCCHHHHHHHHHHhhccCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCC
Q 013008 134 SNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK 213 (451)
Q Consensus 134 ~~~~~~~~~~~l~~~l~~~~~~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~ 213 (451)
+..+.++...+|+++++++++.+.+++++||++|+..++..+. .++|.||+.++.|.+.........
T Consensus 55 y~r~~~p~~~~le~~la~l~g~~~~v~~ssG~~Ai~~al~al~-----------~~Gd~Vi~~~~~y~~t~~~~~~~~-- 121 (390)
T PRK08133 55 YSRFTNPTVTMFQERLAALEGAEACVATASGMAAILAVVMALL-----------QAGDHVVSSRSLFGSTVSLFEKIF-- 121 (390)
T ss_pred eECCCChHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHh-----------CCCCEEEEccCcchhHHHHHHHHH--
Confidence 3445566788999999999998889999999999999988664 168899998887755432111000
Q ss_pred CCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCC
Q 013008 214 EHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLG 293 (451)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~g 293 (451)
......+.+++.+|++++++++++ ++++|++|.++++.|.+.+ +++|.++|++||+++|+|+++...
T Consensus 122 -------~~~G~~v~~vd~~d~~~l~~~i~~-~tklV~ie~p~NptG~v~d----l~~I~~la~~~gi~livD~t~~~~- 188 (390)
T PRK08133 122 -------ARFGIETTFVDLTDLDAWRAAVRP-NTKLFFLETPSNPLTELAD----IAALAEIAHAAGALLVVDNCFCTP- 188 (390)
T ss_pred -------HHcCcEEEEECCCCHHHHHHhcCc-CCeEEEEECCCCCCCCcCC----HHHHHHHHHHcCCEEEEECCCccc-
Confidence 011234556777799999999975 6788888887777787766 999999999999999999998422
Q ss_pred cccccccccccCCCccee--eecccccC-Cccc-ccccccHHHHhhccCCCccCCCCCcHHHHHHHHHHHH
Q 013008 294 RTGYLWAHEHYGIFPDIM--TLAKPLAG-GLPI-GAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLD 360 (451)
Q Consensus 294 r~G~~~~~~~~~~~pdi~--t~sK~lg~-G~~i-G~v~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~ 360 (451)
...... ..+ .|++ +++|.+++ |.++ |++++++++++.+...........++..+..++..++
T Consensus 189 ~~~~pl---~~g--~Divv~S~sK~~~g~g~~~GG~vv~~~~~~~~~~~~~~~~g~~~~~~~a~~~l~gl~ 254 (390)
T PRK08133 189 ALQQPL---KLG--ADVVIHSATKYLDGQGRVLGGAVVGSKELMEEVFGFLRTAGPTLSPFNAWVFLKGLE 254 (390)
T ss_pred ccCCch---hhC--CcEEEeecceeecCCcceEeEEEEcCHHHHHHHHHHHHHhCCCCCHHHHHHHHcccc
Confidence 111111 123 4655 57799986 6776 6677787776655422222223456666655554443
No 255
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.76 E-value=6.2e-17 Score=160.69 Aligned_cols=277 Identities=14% Similarity=0.102 Sum_probs=175.5
Q ss_pred cCCCCCHHHHHHHHHHhhccCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCC
Q 013008 134 SNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK 213 (451)
Q Consensus 134 ~~~~~~~~~~~l~~~l~~~~~~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~ 213 (451)
+....++....|+++|+++.+.+.+++++||++|+..++..+. .++|+||+.++.|++.........
T Consensus 44 Y~r~gnPt~~~lE~~lA~l~g~~~~~~~~sG~~Ai~~al~all-----------~~GD~Vl~~~~~y~~t~~~~~~~~-- 110 (377)
T TIGR01324 44 YGRRGTLTHFALQDAMCELEGGAGCYLYPSGLAAVTNSILAFV-----------KAGDHVLMVDSAYEPTRYFCDIVL-- 110 (377)
T ss_pred ccCCCCccHHHHHHHHHHHhCCCcEEEECcHHHHHHHHHHHhc-----------CCCCEEEEcCCCcHHHHHHHHHHH--
Confidence 3445666788999999999998899999999999999998654 168999999999987543211100
Q ss_pred CCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCC
Q 013008 214 EHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLG 293 (451)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~g 293 (451)
......+.+++.++.+.+++.+++ ++++|++|.+.++.|...+ +++|.++|++||+++|+||+|+ .|
T Consensus 111 -------~~~gi~v~~~d~~~~e~l~~~i~~-~tklV~lesp~Np~g~~~d----l~~I~~la~~~g~~livD~t~a-~g 177 (377)
T TIGR01324 111 -------KRMGVDITYYDPLIGEDIATLIQP-NTKVLFLEAPSSITFEIQD----IPAIAKAARNPGIVIMIDNTWA-AG 177 (377)
T ss_pred -------HhcCcEEEEECCCCHHHHHHhcCC-CceEEEEECCCCCCCcHHH----HHHHHHHHHHcCCEEEEECCCc-cc
Confidence 001112334444455889998865 5789999988777776665 9999999999999999999995 33
Q ss_pred cccccccccccCCCcceee--ecccccC--CcccccccccHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcC--hH-
Q 013008 294 RTGYLWAHEHYGIFPDIMT--LAKPLAG--GLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISN--PA- 366 (451)
Q Consensus 294 r~G~~~~~~~~~~~pdi~t--~sK~lg~--G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~- 366 (451)
..... .....|+++ ++|.++| +.-.|+++++++.++.+...........+|..+...+..++.+.- +.
T Consensus 178 ~~~~p-----l~~gaDivv~S~tK~l~G~~d~~gG~v~~~~~~~~~l~~~~~~~G~~l~p~~a~~~~rgl~tl~~R~~~~ 252 (377)
T TIGR01324 178 LLFKP-----LEHGVDISIQAGTKYLVGHSDIMIGTVVANARTWDQLREHSYLMGQMVDADDAYTTLRGLRTLGVRLKQH 252 (377)
T ss_pred cccCc-----cccCceEEEecCceeccCCCCceEEEEEeCHHHHHHHHHHHHHhCCCCCHHHHHHHHhhhhhHHHHHHHH
Confidence 32221 123467764 5799986 367788888888777664222222334467666666555553310 11
Q ss_pred -----HHHHHHhCCCCcce------------------ecccceeEEEEecC-C---hHHHHHHHHHCCce---------e
Q 013008 367 -----FLASKLARNPHVKD------------------VRGLGLIIGIEFDV-S---ATPVVDACRDSGLL---------V 410 (451)
Q Consensus 367 -----~~~~~~~~~~~~~~------------------v~g~G~~~~~~~~~-~---~~~~~~~l~~~Gv~---------~ 410 (451)
.+.++++.+|.+.. ..+.|.++.|+++. . ..+|.+.|.-.++. +
T Consensus 253 ~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~~~~~~~~~~~l~~~~~~~slG~~~sl~ 332 (377)
T TIGR01324 253 QESSLAIAKWLSEQPEVARVLHPALPSCPGHEFWKRDFSGSSGLFSFVLQRLTQKQVHAFLDHLQLFGLGYSWGGYESLA 332 (377)
T ss_pred HHHHHHHHHHHHhCCCcCEEECCCCCCCccHHHHHHhccCCCceEEEEECCCCHHHHHHHHHhCCcceEeccCCCcccee
Confidence 11114444553322 23567888888852 2 23455544322221 1
Q ss_pred e-ec------------CCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 013008 411 L-TA------------GKGNVVRLVPPLIISEQELDQAVEILCKTLPV 445 (451)
Q Consensus 411 ~-~~------------~~~~~iri~~~~~~t~e~i~~~l~~l~~~l~~ 445 (451)
. +. -.++.+|+++.+ |+.+.+++.|+++|+.
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~liR~svGl----E~~~dl~~dl~~al~~ 376 (377)
T TIGR01324 333 LCNQPELGHRPNIKRNLEGPLIRVHIGL----ENVDDLKADLKAGFEA 376 (377)
T ss_pred ecCCCCCCHHHHHhccCCCCEEEEEeCC----CCHHHHHHHHHHHHhc
Confidence 1 10 012467886554 5667777777777754
No 256
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.76 E-value=1.2e-16 Score=159.41 Aligned_cols=198 Identities=22% Similarity=0.243 Sum_probs=137.2
Q ss_pred cCCCCCHHHHHHHHHHhhccCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCC
Q 013008 134 SNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK 213 (451)
Q Consensus 134 ~~~~~~~~~~~l~~~l~~~~~~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~ 213 (451)
+..+.++...+|++++++..+.+.+++++||++|+..+++.+.. ++++||+..+.| |.+.......
T Consensus 48 y~r~~~p~~~~le~~la~l~g~~~~~~~~sG~~Ai~~al~al~~-----------~Gd~Vl~~~~~~-~~t~~~~~~~-- 113 (380)
T TIGR01325 48 YSRYANPTVAAFEERIAALEGAERAVATATGMSAIQAALMTLLQ-----------AGDHVVASRSLF-GSTVGFISEI-- 113 (380)
T ss_pred eecCCCchHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhC-----------CCCEEEEecCCc-chHHHHHHHH--
Confidence 44556667899999999999988899999999999999986641 578898877655 4432221100
Q ss_pred CCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCC
Q 013008 214 EHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLG 293 (451)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~g 293 (451)
.......+.+++.+|++++++++++ ++++|++|.++++.|...+ +++|.++|+++|+++|+||+|+.+
T Consensus 114 ------~~~~g~~v~~v~~~d~~~l~~~i~~-~tklV~le~p~np~g~~~d----l~~I~~la~~~gi~livD~a~~~~- 181 (380)
T TIGR01325 114 ------LPRFGIEVSFVDPTDLNAWEAAVKP-NTKLVFVETPSNPLGELVD----IAALAELAHAIGALLVVDNVFATP- 181 (380)
T ss_pred ------HHHhCCEEEEECCCCHHHHHHhcCC-CceEEEEECCCCCCCeeeC----HHHHHHHHHHcCCEEEEECCCccc-
Confidence 0011234566777789999998865 5789999988777787766 999999999999999999998632
Q ss_pred cccccccccccCCCcceee--ecccccC-Cccc-ccccccHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHh
Q 013008 294 RTGYLWAHEHYGIFPDIMT--LAKPLAG-GLPI-GAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKI 362 (451)
Q Consensus 294 r~G~~~~~~~~~~~pdi~t--~sK~lg~-G~~i-G~v~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~ 362 (451)
..... ....+|+++ ++|.++| |.++ |++++++++++.++..........+|..+++++..++.+
T Consensus 182 ~~~~p-----l~~g~Divv~S~sK~l~g~g~~~gG~vv~~~~~~~~l~~~~~~~g~~~~p~~a~~~l~~l~tl 249 (380)
T TIGR01325 182 VLQQP-----LKLGADVVVYSATKHIDGQGRVMGGVIAGSEELMAEVAVYLRHTGPAMSPFNAWVLLKGLETL 249 (380)
T ss_pred ccCCc-----hhhCCCEEEeeccceecCCCCeEEEEEEeCHHHHHHHHHHHHhhCCCCCHHHHHHHHhccCcH
Confidence 11111 123467774 7899986 5554 778888888777653321222234566666665555443
No 257
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.76 E-value=4.3e-17 Score=162.91 Aligned_cols=277 Identities=15% Similarity=0.132 Sum_probs=175.7
Q ss_pred cCCCCCHHHHHHHHHHhhccCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCC
Q 013008 134 SNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK 213 (451)
Q Consensus 134 ~~~~~~~~~~~l~~~l~~~~~~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~ 213 (451)
+..+.++...+|+++++++.+.+..++++||+.|+..++..+. .++++||+.++.|.+.. ........
T Consensus 55 y~r~~~pt~~~Le~~lA~l~G~~~al~~~sG~~Ai~~~l~al~-----------~~Gd~Vv~~~~~y~~~~-~~~~~~~~ 122 (386)
T PRK06767 55 YSRLGNPTVKLFEERMAVLEGGEEALAFGSGMAAISATLIGFL-----------KAGDHIICSNGLYGCTY-GFLEVLEE 122 (386)
T ss_pred ccCCCCcchHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHh-----------CCCCEEEEcCCcHHHHH-HHHHHHHh
Confidence 4455666688999999999998888999999999988887554 16889999888774432 22221110
Q ss_pred CCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCC
Q 013008 214 EHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLG 293 (451)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~g 293 (451)
. ....+.+++..|++++++++.+ ++++|++|.++++.|.+.+ +++|.++|+++|+++|+||+|.. +
T Consensus 123 ~--------~gi~~~~~~~~d~~~l~~~i~~-~tklV~lesp~NptG~v~d----l~~I~~la~~~g~~vivD~a~a~-~ 188 (386)
T PRK06767 123 K--------FMITHSFCDMETEADIENKIRP-NTKLIFVETPINPTMKLID----LKQVIRVAKRNGLLVIVDNTFCS-P 188 (386)
T ss_pred h--------cCeEEEEeCCCCHHHHHHhhCc-CceEEEEeCCCCCCceecC----HHHHHHHHHHcCCEEEEECCCcc-c
Confidence 0 0112334455689999999865 5778888888777887776 89999999999999999999852 2
Q ss_pred cccccccccccCCCccee--eecccccC-Cccc-ccccccHHHHhhccCCCcc-CCCCCcHHHHHHHHHHHHHhcC--hH
Q 013008 294 RTGYLWAHEHYGIFPDIM--TLAKPLAG-GLPI-GAALVTEKVASAINYGDHG-STFAGSPLVCNAAIAVLDKISN--PA 366 (451)
Q Consensus 294 r~G~~~~~~~~~~~pdi~--t~sK~lg~-G~~i-G~v~~~~~i~~~~~~~~~~-~t~~~~~~~~aaa~aal~~~~~--~~ 366 (451)
..+... ..+ .|++ +++|.++| |.++ |+++++++.++.+...... ..-..+|+.+++++..|+.+.. +.
T Consensus 189 ~~~~pl---~~g--~Div~~S~sK~l~g~g~~~gG~v~~~~~~i~~~~~~~~~~~g~~~~~~~a~l~~~~L~tl~~r~~~ 263 (386)
T PRK06767 189 YLQRPL---ELG--CDAVVHSATKYIGGHGDVVAGVTICKTRALAEKIRPMRKDIGGIMAPFDAWLLLRGLKTLAVRMDR 263 (386)
T ss_pred ccCCch---hcC--CcEEEecCcceecCCCCceeEEEEeChHHHHHHHHHHHHHhCCCCCHHHHHHHHcCCCcHHHHHHH
Confidence 222211 123 4655 56799986 6665 8888888876654211111 1112357766666655543211 11
Q ss_pred HH------HHHHhCCCCccee------------cccceeEEEEecC---ChHHHHHHHHHCCceeeecC-----------
Q 013008 367 FL------ASKLARNPHVKDV------------RGLGLIIGIEFDV---SATPVVDACRDSGLLVLTAG----------- 414 (451)
Q Consensus 367 ~~------~~~~~~~~~~~~v------------~g~G~~~~~~~~~---~~~~~~~~l~~~Gv~~~~~~----------- 414 (451)
.. .+.++.+|.+..+ ++.|.++.|+++. ...+|.+.|...++.+.-++
T Consensus 264 ~~~~a~~la~~L~~~p~v~~v~~p~~~~~~~~~~~~gg~vsf~l~~~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~p~~~ 343 (386)
T PRK06767 264 HCDNAEKIVSFLKNHDAVEGVWYPEGELASRQMKRGGGVISFSIKGGKEETQAFINDLHFITIAVSLGDTETLIQHPATM 343 (386)
T ss_pred HHHHHHHHHHHHHcCCCccEEECCCcHHHHHhCCCCCceEEEEEcCCHHHHHHHHHhCCccEEecCCCCcCccccCCCcc
Confidence 11 1155667755533 3567788888852 24566666654443322111
Q ss_pred ---------------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 013008 415 ---------------KGNVVRLVPPLIISEQELDQAVEILCKTLPV 445 (451)
Q Consensus 415 ---------------~~~~iri~~~~~~t~e~i~~~l~~l~~~l~~ 445 (451)
..+.+|+++.+ |+.+.+++-|+++|+.
T Consensus 344 ~~~~~~~~~~~~~gi~~~l~R~svGl----E~~~dl~~dl~~al~~ 385 (386)
T PRK06767 344 THAAIPAELRQEMGIYDNLIRLSVGL----ESWEDIVSDLEQALKK 385 (386)
T ss_pred ccccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHhh
Confidence 02467886554 5677778888877754
No 258
>PRK07049 methionine gamma-lyase; Validated
Probab=99.75 E-value=1.2e-16 Score=161.18 Aligned_cols=202 Identities=14% Similarity=0.120 Sum_probs=137.9
Q ss_pred cCCCCCHHHHHHHHHHhhccCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCC
Q 013008 134 SNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK 213 (451)
Q Consensus 134 ~~~~~~~~~~~l~~~l~~~~~~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~ 213 (451)
++.+.++....|+++|+++.+.+.+++++||++|+..++..+.. ++|.||+.+|.|.++.........
T Consensus 77 y~R~~~Pt~~~Le~~lA~leg~~~~iv~~sG~~Ai~~~l~al~~-----------~Gd~Vv~~~p~Y~~~~~~~~~~l~- 144 (427)
T PRK07049 77 YSRFNHPNSEIVEDRLAVYEGAESAALFSSGMSAIATTLLAFVR-----------PGDVILHSQPLYGGTETLLAKTFR- 144 (427)
T ss_pred ccCCCCcCHHHHHHHHHHHhCCCcEEEEccHHHHHHHHHHHHhC-----------CCCEEEEcCCCcccHHHHHHHHHH-
Confidence 45566666889999999999988999999999999998886652 689999999999887543211100
Q ss_pred CCcCCCCcCCCCC-eeEeeCCCHHHHHHhcC----CCCeEEEEEccccCCCCccccCHHHHHHHHHHHHH---hCCEEEE
Q 013008 214 EHYRSPFEPVMPG-VNFVEYGNIEATRKLIQ----PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDD---AGALLVF 285 (451)
Q Consensus 214 ~~~~~~~~~~~~~-~~~~~~~d~~~le~~l~----~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~---~g~llI~ 285 (451)
..... +.+.+..|.+++++.+. ..++++|++|.+++++|.+ ++.+.+.+|++.|++ +++++|+
T Consensus 145 --------~~Gi~~v~~~~~~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v-~d~~~l~~la~~~~~~~~~~~~vvv 215 (427)
T PRK07049 145 --------NFGVGAVGFADGLSEAAIGAAAEAAAAKGRVSLILIETPANPTNSL-VDVAAVRRVADAIEARQGHRPIIAC 215 (427)
T ss_pred --------hcCcEEEEEeCCCCHHHHHHHHHhhccCCCceEEEEECCCCCCCcc-cCHHHHHHHHHHhhhcccCCCEEEE
Confidence 00011 11222246777876664 3467889998877777765 465555555555433 7999999
Q ss_pred eccccCCCcccccccccccCCCccee--eecccccC--CcccccccccHHHHhhccCCCccCCCCCcHHHHHHHHHHHHH
Q 013008 286 DEVQCGLGRTGYLWAHEHYGIFPDIM--TLAKPLAG--GLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDK 361 (451)
Q Consensus 286 DEv~tg~gr~G~~~~~~~~~~~pdi~--t~sK~lg~--G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~ 361 (451)
||++.++.... . . .++ .|++ ++||.++| |+++|++++++++++.+.........+.+|+.+.+++..|+.
T Consensus 216 Dety~~~~~~~-p--l-~~g--~divv~S~SK~~gG~~glr~G~vv~~~~l~~~l~~~~~~~g~~ls~~~a~l~~r~L~t 289 (427)
T PRK07049 216 DNTLLGPVFQK-P--L-EHG--ADLSVYSLTKYVGGHSDLVAGAVLGRKALIRQVRALRSAIGTQLDPHSCWMLGRSLET 289 (427)
T ss_pred ECCccccccCC-c--c-ccC--CCEEEEcCceeecCCCCcEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHcCCCh
Confidence 99986542111 1 1 123 4554 78999994 799999999999888776433223344678888887776654
Q ss_pred h
Q 013008 362 I 362 (451)
Q Consensus 362 ~ 362 (451)
+
T Consensus 290 l 290 (427)
T PRK07049 290 L 290 (427)
T ss_pred H
Confidence 3
No 259
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.75 E-value=2e-16 Score=158.08 Aligned_cols=199 Identities=13% Similarity=0.044 Sum_probs=139.2
Q ss_pred cccCCCCCHHHHHHHHHHhhccCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhcc
Q 013008 132 HVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALT 211 (451)
Q Consensus 132 ~~~~~~~~~~~~~l~~~l~~~~~~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~ 211 (451)
+.+..+.++...+|+++++++.+.+.+++++||+.|+..++..+.. +++.||+.++.|.+.........
T Consensus 51 ~~y~r~~~p~~~~le~~lA~l~g~~~av~~~sG~~Ai~~~l~al~~-----------~Gd~Vi~~~~~y~~t~~~~~~~~ 119 (391)
T TIGR01328 51 YIYSRLGNPTVSNLEGRIAFLEGTEAAVATSSGMGAIAATLLTILK-----------AGDHLISDECLYGCTFALLEHAL 119 (391)
T ss_pred CceeCCCCchHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhC-----------CCCEEEEecCcchHHHHHHHHHH
Confidence 3455666777899999999999988899999999999998876541 68899999888754332211110
Q ss_pred CCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccC
Q 013008 212 SKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCG 291 (451)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg 291 (451)
......+.+++.+|++++++.+.+ ++++|++|.++++.|.+.+ +++|.++|+++|+++|+||+|..
T Consensus 120 ---------~~~G~~~~~vd~~d~e~l~~~i~~-~tklV~le~p~Np~G~v~d----l~~I~~la~~~gi~livD~a~a~ 185 (391)
T TIGR01328 120 ---------TKFGIQVDFINMAIPEEVKAHIKD-NTKIVYFETPANPTMKLID----MERVCRDAHSQGVKVIVDNTFAT 185 (391)
T ss_pred ---------hcCCeEEEEECCCCHHHHHHhhcc-CCeEEEEECCCCCCCcccC----HHHHHHHHHHcCCEEEEECCCch
Confidence 011233456677789999999864 5778888887777787666 99999999999999999999852
Q ss_pred CCcccccccccccCCCccee--eecccccC-Ccc-cccccccHHHHhhccCCC--ccCCCCCcHHHHHHHHHHHHH
Q 013008 292 LGRTGYLWAHEHYGIFPDIM--TLAKPLAG-GLP-IGAALVTEKVASAINYGD--HGSTFAGSPLVCNAAIAVLDK 361 (451)
Q Consensus 292 ~gr~G~~~~~~~~~~~pdi~--t~sK~lg~-G~~-iG~v~~~~~i~~~~~~~~--~~~t~~~~~~~~aaa~aal~~ 361 (451)
+..+.. .+...|++ +++|.+++ |.+ .|++++++++++.++... .......+|+.++.++..|+.
T Consensus 186 -~~~~~~-----~~~g~Divv~S~sK~lgg~g~~~gG~v~~~~~li~~l~~~~~~~~~g~~l~~~~a~l~l~~L~t 255 (391)
T TIGR01328 186 -PMLTNP-----VALGVDVVVHSATKYIGGHGDVVAGLICGKAELLQQIRMVGIKDMTGSVISPFDAWLILRGLKT 255 (391)
T ss_pred -hccCCc-----hhcCCCEEEccccccccCCCCceEEEEEcCHHHHHHHHHHHHHhCCCCCCCcHHHHHHHhCcCc
Confidence 222221 12345665 56799986 654 577888888887765321 111234567777766665543
No 260
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.75 E-value=2.8e-16 Score=156.59 Aligned_cols=230 Identities=17% Similarity=0.180 Sum_probs=155.6
Q ss_pred ccCCCCCHHHHHHHHHHhhccCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccC
Q 013008 133 VSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTS 212 (451)
Q Consensus 133 ~~~~~~~~~~~~l~~~l~~~~~~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~ 212 (451)
.++.++++...+|+++|+++.+.+.+++++||++|+..++.... .++|+|++.++.|++..........
T Consensus 45 ~Y~R~~~pt~~~L~~~lA~l~g~~~~i~~~sg~~Ai~~~l~~l~-----------~~GD~Vl~~~~~y~~~~~~~~~~~~ 113 (386)
T PRK08045 45 DYSRRGNPTRDVVQRALAELEGGAGAVLTNTGMSAIHLVTTVFL-----------KPGDLLVAPHDCYGGSYRLFDSLAK 113 (386)
T ss_pred eeeCCCCccHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHHc-----------CCCCEEEEcCCCcHHHHHHHHHHHh
Confidence 34566777789999999999987889999999999999998654 2689999999999864432221110
Q ss_pred CCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCC
Q 013008 213 KEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGL 292 (451)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~ 292 (451)
.. ...+.+++..|++++++++++ ++++|++|.++++.|.+.+ +++|.++|+++|+++|+||+|...
T Consensus 114 ~~---------gi~v~~vd~~d~e~l~~~l~~-~tklV~l~sP~NPtG~v~d----i~~I~~ia~~~g~~vivDeay~~~ 179 (386)
T PRK08045 114 RG---------CYRVLFVDQGDEQALRAALAE-KPKLVLVESPSNPLLRVVD----IAKICHLAREAGAVSVVDNTFLSP 179 (386)
T ss_pred hC---------CeEEEEeCCCCHHHHHHhccc-CCeEEEEECCCCCCCEecC----HHHHHHHHHHcCCEEEEECCCCcc
Confidence 00 011223344589999999865 5778888877777787666 899999999999999999998643
Q ss_pred CcccccccccccCCCccee--eecccccC--Ccccccccc-cHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcC--h
Q 013008 293 GRTGYLWAHEHYGIFPDIM--TLAKPLAG--GLPIGAALV-TEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISN--P 365 (451)
Q Consensus 293 gr~G~~~~~~~~~~~pdi~--t~sK~lg~--G~~iG~v~~-~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~--~ 365 (451)
. .... .....|++ +++|.++| +...|++++ ++++.+.+.......+...+|+.+..++..|+.+.. +
T Consensus 180 ~-~~~p-----l~~gaDivv~S~tK~l~G~~d~~~G~vi~~~~~~~~~l~~~~~~~g~~~~p~~~~l~~rgl~tl~~R~~ 253 (386)
T PRK08045 180 A-LQNP-----LALGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGVTGGAFDSYLLLRGLRTLVPRME 253 (386)
T ss_pred c-cCCc-----hhhCCCEEEeecceeccCCCCceeEEEEeCcHHHHHHHHHHHHhcCCCCCHHHHHHHHhhhccHHHHHH
Confidence 1 1111 12234655 67899985 467888876 577777664332333455788888877777764321 1
Q ss_pred HHHH------HHHhCCCCccee------------------cccceeEEEEec
Q 013008 366 AFLA------SKLARNPHVKDV------------------RGLGLIIGIEFD 393 (451)
Q Consensus 366 ~~~~------~~~~~~~~~~~v------------------~g~G~~~~~~~~ 393 (451)
...+ +.++.+|.+..| .|.|.++.|+++
T Consensus 254 ~~~~na~~la~~L~~~p~v~~V~yp~l~~~p~~~~~~~~~~g~g~~~s~~~~ 305 (386)
T PRK08045 254 LAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELD 305 (386)
T ss_pred HHHHHHHHHHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEec
Confidence 1111 144555644332 366888999985
No 261
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.75 E-value=1.4e-16 Score=159.84 Aligned_cols=197 Identities=14% Similarity=0.111 Sum_probs=139.7
Q ss_pred cCCCCCHHHHHHHHHHhhccCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCC
Q 013008 134 SNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK 213 (451)
Q Consensus 134 ~~~~~~~~~~~l~~~l~~~~~~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~ 213 (451)
+..++++...+|+++|+++++.+.+++++||++|+..++.... .++++||+.++.|...........
T Consensus 58 Y~r~~~p~~~~Le~~iA~~~g~~~~l~~~sG~~Ai~~al~~ll-----------~~Gd~Vl~~~~~y~~~~~~~~~~~-- 124 (400)
T PRK06234 58 YSRLGNPTSTEVENKLALLEGGEAAVVAASGMGAISSSLWSAL-----------KAGDHVVASDTLYGCTFALLNHGL-- 124 (400)
T ss_pred ccCCCCccHHHHHHHHHHHhCCCcEEEEcCHHHHHHHHHHHHh-----------CCCCEEEEecCccchHHHHHHHHH--
Confidence 4555667788999999999998889999999999999887554 168899999987754332211100
Q ss_pred CCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHh--CCEEEEeccccC
Q 013008 214 EHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDA--GALLVFDEVQCG 291 (451)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~--g~llI~DEv~tg 291 (451)
......+.+++..|++++++++.+ ++++|++|.++++.|.+.+ +++|.++|++| |+++|+||+|..
T Consensus 125 -------~~~G~~v~~vd~~d~e~l~~~i~~-~tklI~iesP~NPtG~v~d----l~~I~~la~~~~~~i~livDea~~~ 192 (400)
T PRK06234 125 -------TRYGVEVTFVDTSNLEEVRNALKA-NTKVVYLETPANPTLKVTD----IKAISNIAHENNKECLVFVDNTFCT 192 (400)
T ss_pred -------hhCCeEEEEECCCCHHHHHHHhcc-CCeEEEEECCCCCCCCcCC----HHHHHHHHHhcCCCCEEEEECCCCc
Confidence 011133456666799999999975 5778888887777787666 99999999997 999999999863
Q ss_pred CCcccccccccccCCCccee--eecccccC-Ccc-cccccccHHHHhhccCC--CccCCCCCcHHHHHHHHHHHHH
Q 013008 292 LGRTGYLWAHEHYGIFPDIM--TLAKPLAG-GLP-IGAALVTEKVASAINYG--DHGSTFAGSPLVCNAAIAVLDK 361 (451)
Q Consensus 292 ~gr~G~~~~~~~~~~~pdi~--t~sK~lg~-G~~-iG~v~~~~~i~~~~~~~--~~~~t~~~~~~~~aaa~aal~~ 361 (451)
. ..+... +...|++ +++|.+++ |.+ .|++++++++++.++.. ....+...+|+.++.++..|+.
T Consensus 193 ~-~~~~~l-----~~g~Divv~S~sK~l~g~g~~~gG~v~~~~~~~~~l~~~~~~~~~g~~l~p~~a~l~~~~l~t 262 (400)
T PRK06234 193 P-YIQRPL-----QLGADVVVHSATKYLNGHGDVIAGFVVGKEEFINQVKLFGIKDMTGSVIGPFEAFLIIRGMKT 262 (400)
T ss_pred h-hcCCch-----hhCCcEEEeeccccccCCCCceeEEEEecHHHHHHHHHHHHHHhcCCCCCHHHHHHHHhccCc
Confidence 2 222211 2235555 67799986 665 48999999888877532 1122355678887777766653
No 262
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.75 E-value=3.6e-16 Score=156.68 Aligned_cols=198 Identities=15% Similarity=0.107 Sum_probs=136.0
Q ss_pred cCCCCCHHHHHHHHHHhhccCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCC
Q 013008 134 SNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK 213 (451)
Q Consensus 134 ~~~~~~~~~~~l~~~l~~~~~~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~ 213 (451)
+..+.++...+|+++|+++.+.+..++++||++|+..++..+. .++|+||+.++.|++..........
T Consensus 54 y~R~~~p~~~~Le~~lA~l~g~~~~v~~~sG~~Ai~~~l~all-----------~pGD~Vvv~~p~Y~~t~~~~~~~~~- 121 (405)
T PRK08776 54 YTRSGNPTRDLLGEALAELEGGAGGVITATGMGAINLVLNALL-----------QPGDTLVVPHDAYGGSWRLFNALAK- 121 (405)
T ss_pred ccCCCChHHHHHHHHHHHHhCCCceEEEcCHHHHHHHHHHHHh-----------CCCCEEEEccCCchHHHHHHHHHHH-
Confidence 4556677788999999999887777888889999999888654 1689999999999764321111100
Q ss_pred CCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCC
Q 013008 214 EHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLG 293 (451)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~g 293 (451)
.....+..++..|++++++++++ ++++|+++..+++.|.+.. +++|.++|++||+++|+||+|....
T Consensus 122 --------~~g~~v~~v~~~d~~~l~~~i~~-~tklV~l~~P~NPtG~v~d----l~~I~~la~~~gi~vIvD~a~a~~~ 188 (405)
T PRK08776 122 --------KGHFALITADLTDPRSLADALAQ-SPKLVLIETPSNPLLRITD----LRFVIEAAHKVGALTVVDNTFLSPA 188 (405)
T ss_pred --------hcCcEEEEECCCCHHHHHHhcCc-CCeEEEEECCCCCCCccCC----HHHHHHHHHHcCCEEEEECCCcccc
Confidence 01123445555689999999865 5677777766666776655 9999999999999999999996321
Q ss_pred cccccccccccCCCccee--eecccccC-C-cccccccc-cHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHh
Q 013008 294 RTGYLWAHEHYGIFPDIM--TLAKPLAG-G-LPIGAALV-TEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKI 362 (451)
Q Consensus 294 r~G~~~~~~~~~~~pdi~--t~sK~lg~-G-~~iG~v~~-~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~ 362 (451)
.. .. . ....|++ +.+|.++| | ...|++++ ++++.+.+........++.+|+.+.+++..++.+
T Consensus 189 ~~-~p--l---~~gaDivv~S~tK~l~g~~~~~~G~vv~~~~~l~~~l~~~~~~~g~~~s~~~a~l~~~gl~tl 256 (405)
T PRK08776 189 LQ-KP--L---EFGADLVLHSTTKYINGHSDVVGGAVVARDAELHQQLVWWANALGLTGSPFDAFLTLRGLRTL 256 (405)
T ss_pred cC-Cc--c---cccCCEEEecCceeecCCCCceEEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHHHhhhCcH
Confidence 11 11 1 1235666 45699975 3 66788766 5777776643222233456889888887766654
No 263
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.75 E-value=1.4e-16 Score=159.58 Aligned_cols=229 Identities=19% Similarity=0.153 Sum_probs=154.8
Q ss_pred cCCCCCHHHHHHHHHHhhccCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCC
Q 013008 134 SNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK 213 (451)
Q Consensus 134 ~~~~~~~~~~~l~~~l~~~~~~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~ 213 (451)
+..+.++...+|+++|+++.+.+.+++++||+.|+..++..+. .++|+||+.+..|.+.........
T Consensus 64 Y~r~~~p~~~~le~~lA~l~g~~~al~~~sG~~Ai~~~l~all-----------~~Gd~Vl~~~~~~~~t~~~~~~~~-- 130 (403)
T PRK07810 64 YSRYGNPTVSMFEERLRLIEGAEACFATASGMSAVFTALGALL-----------GAGDRLVAARSLFGSCFVVCNEIL-- 130 (403)
T ss_pred eeCCCCchHHHHHHHHHHHhCCCcEEEECChHHHHHHHHHHHh-----------CCCCEEEEccCCcchHHHHHHHHH--
Confidence 4556777789999999999998899999999999999887654 168889988766544322111110
Q ss_pred CCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCC
Q 013008 214 EHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLG 293 (451)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~g 293 (451)
......+.+++.+|++++++++++ ++++|++|.+.++.|.+.+ +++|.++|+++|+++|+||+|...
T Consensus 131 -------~~~G~~v~~vd~~d~~~l~~ai~~-~tklV~~esp~Nptg~v~d----l~~I~~la~~~g~~vivD~a~a~~- 197 (403)
T PRK07810 131 -------PRWGVETVFVDGEDLSQWEEALSV-PTQAVFFETPSNPMQSLVD----IAAVSELAHAAGAKVVLDNVFATP- 197 (403)
T ss_pred -------HHcCcEEEEECCCCHHHHHHhcCc-CceEEEEECCCCCCCeecC----HHHHHHHHHHcCCEEEEECCCCcc-
Confidence 011234556677799999999975 5788999988888887776 999999999999999999998521
Q ss_pred cccccccccccCCCccee--eecccccC-Cccc-ccccccHHHHh-hccCCCccCCCCCcHHHHHHHHHHHHHhcCh--H
Q 013008 294 RTGYLWAHEHYGIFPDIM--TLAKPLAG-GLPI-GAALVTEKVAS-AINYGDHGSTFAGSPLVCNAAIAVLDKISNP--A 366 (451)
Q Consensus 294 r~G~~~~~~~~~~~pdi~--t~sK~lg~-G~~i-G~v~~~~~i~~-~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~--~ 366 (451)
..... . ..| .|++ +++|.++| |.++ |+++++++.+. .++..........+|+.++.++..|+.+... .
T Consensus 198 ~~~~~--~-~~g--aDivv~S~tK~l~g~g~~~gG~v~~~~~~~~~~l~~~~~~~g~~~s~~~a~l~l~~L~tl~~R~~~ 272 (403)
T PRK07810 198 LLQRG--L-PLG--ADVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQKLMRHTGPALSAFNAWVLLKGLETLALRVRH 272 (403)
T ss_pred ccCCh--h-hcC--CcEEEccCCceecCCcCceeEEEEeChHHHHHHHHHHHHHhCCCCCHHHHHHHHhccCcHHHHHHH
Confidence 12111 1 223 5666 46799986 6665 77888876554 2332111222356788888888777654211 1
Q ss_pred ------HHHHHHhCCCCcceec------------------ccceeEEEEec
Q 013008 367 ------FLASKLARNPHVKDVR------------------GLGLIIGIEFD 393 (451)
Q Consensus 367 ------~~~~~~~~~~~~~~v~------------------g~G~~~~~~~~ 393 (451)
.+.+.++.+|.+..|. +.|.++.|+++
T Consensus 273 ~~~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~g~~~s~~l~ 323 (403)
T PRK07810 273 SNASALRIAEFLEGHPAVRWVRYPFLPSHPQYDLAKRQMSGGGTVVTFELD 323 (403)
T ss_pred HHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEc
Confidence 1111556666554443 66888999985
No 264
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.75 E-value=2.4e-16 Score=156.70 Aligned_cols=282 Identities=15% Similarity=0.108 Sum_probs=177.3
Q ss_pred cccCCCCCHHHHHHHHHHhhccCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhcc
Q 013008 132 HVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALT 211 (451)
Q Consensus 132 ~~~~~~~~~~~~~l~~~l~~~~~~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~ 211 (451)
+.+..+.++...+|+++|++..+.+.+++++||++|+..++..+. .++|+|++.+++|.+.........
T Consensus 45 ~~Y~R~~npt~~~Le~~lA~leg~e~ivvt~gg~~Ai~~~l~all-----------~~Gd~Il~~~~~y~~~~~~~~~~~ 113 (388)
T PRK08861 45 YDYTRSGNPNRGLLEQTLSELESGKGAVVTNCGTSALNLWVSALL-----------GPDDLIVAPHDCYGGTYRLFNTRA 113 (388)
T ss_pred ccccCCCCchHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHHc-----------CCCCEEEEcCCchHHHHHHHHHHH
Confidence 345667777799999999999999999999999999999998664 168999999999965432111110
Q ss_pred CCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccC
Q 013008 212 SKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCG 291 (451)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg 291 (451)
. ...-.+.+++..|++++++++.+ ++++|++|.+++++|.+.+ +++|.++|+++|+++|+||+|..
T Consensus 114 ~---------~~gi~v~~vd~~d~e~l~~~i~~-~tklV~lesP~NPtG~v~d----l~~I~~la~~~gi~vIvDea~~~ 179 (388)
T PRK08861 114 N---------KGDFKVQFVDQSDAAALDAALAK-KPKLILLETPSNPLVRVVD----IAELCQKAKAVGALVAVDNTFLT 179 (388)
T ss_pred h---------cCCeEEEEECCCCHHHHHHhcCc-CCeEEEEECCCCCCCcccC----HHHHHHHHHHcCCEEEEECCccc
Confidence 0 00112344555689999999865 6788888877777777776 88999999999999999999953
Q ss_pred CCcccccccccccCCCccee--eecccccC-C-ccccccccc-HHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhc-C-
Q 013008 292 LGRTGYLWAHEHYGIFPDIM--TLAKPLAG-G-LPIGAALVT-EKVASAINYGDHGSTFAGSPLVCNAAIAVLDKIS-N- 364 (451)
Q Consensus 292 ~gr~G~~~~~~~~~~~pdi~--t~sK~lg~-G-~~iG~v~~~-~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~-~- 364 (451)
. .... ...+..|++ +++|.++| + ...|+++++ +++.+.++..........+|+.+...+..|+.+. +
T Consensus 180 ~-~~~~-----pl~~GaDivv~S~tK~l~G~~d~~gG~i~~~~~~~~~~~~~~~~~~G~~~~p~~a~l~~rgl~Tl~lR~ 253 (388)
T PRK08861 180 P-VLQK-----PLELGADFVIHSTTKYINGHSDVIGGVLITKTKEHAEELAWWGNCIGATGTPFDSYMTLRGIRTLGARM 253 (388)
T ss_pred c-ccCC-----CcccCCCEEEeecceeccCCCcceeEEEEecHHHHHHHHHHHHhccCCCCChHHHHHHHhcCCCHHHHH
Confidence 1 1111 122346766 45699986 3 677888774 5666655432222233456777665554444321 0
Q ss_pred hHHH------HHHHhCCCCcce------------------ecccceeEEEEecCCh---HHHHHHHH--HCCce------
Q 013008 365 PAFL------ASKLARNPHVKD------------------VRGLGLIIGIEFDVSA---TPVVDACR--DSGLL------ 409 (451)
Q Consensus 365 ~~~~------~~~~~~~~~~~~------------------v~g~G~~~~~~~~~~~---~~~~~~l~--~~Gv~------ 409 (451)
+... .++++.+|.+.. ..+.|.++.|+++... .+|.+.|. ..++.
T Consensus 254 ~~~~~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~gg~~sf~~~~~~~~~~~f~~~l~l~~~~~s~G~~~s 333 (388)
T PRK08861 254 RVHEESAQQILAYLQTQSLVGTIYHPSLPEHPGHEIAKKQQSGFGSMLSFEFAGSFEQLKVFVKALALFSLAESLGGVES 333 (388)
T ss_pred HHHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhCCCCCceEEEEeCCCHHHHHHHHhcCCcceEccCCCCCcc
Confidence 1111 114455554432 2466888899985322 23333321 11111
Q ss_pred -e-eec---------------C-CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHhh
Q 013008 410 -V-LTA---------------G-KGNVVRLVPPLIISEQELDQAVEILCKTLPVLDS 448 (451)
Q Consensus 410 -~-~~~---------------~-~~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~~~ 448 (451)
+ .|. | ..+.+|+++.+ |+++.+++.|+++|+++.+
T Consensus 334 l~~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGl----E~~~dli~Dl~~al~~~~~ 386 (388)
T PRK08861 334 LICHPASMTHRAMGEEALAEAGVSQQLLRLSVGL----EDAQDLIADLDQAFAKAAE 386 (388)
T ss_pred eeeCCCcccccccCHHHHHhcCCCCCeEEEEeCc----CCHHHHHHHHHHHHHHHHh
Confidence 1 111 0 12468886554 5677788888888877653
No 265
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.75 E-value=1.7e-16 Score=159.00 Aligned_cols=279 Identities=19% Similarity=0.172 Sum_probs=174.9
Q ss_pred cCCCCCHHHHHHHHHHhhccCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCC
Q 013008 134 SNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK 213 (451)
Q Consensus 134 ~~~~~~~~~~~l~~~l~~~~~~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~ 213 (451)
+..+.++...+|+++|+++.+.+..++++||+.|+..++.... .++|+||+.++.|.+..........
T Consensus 59 y~r~~~p~~~~Le~~lA~l~G~~~~~~~~sG~~Ai~~~l~~~l-----------~~Gd~Vl~~~~~y~~~~~~~~~~~~- 126 (398)
T PRK07504 59 YSRYSNPTVDMFEKRMCALEGAEDARATASGMAAVTAAILCQV-----------KAGDHVVAARALFGSCRYVVETLLP- 126 (398)
T ss_pred eecCCCchHHHHHHHHHHHhCCCeeeEecCHHHHHHHHHHHHh-----------CCCCEEEEcCCchhHHHHHHHHHHh-
Confidence 3455666789999999999998877889999999988776543 1689999999998765432211100
Q ss_pred CCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCC
Q 013008 214 EHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLG 293 (451)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~g 293 (451)
.....+.+++..|++++++++++ ++++|++|.++++.|.+.+ +++|.++|+++|+++|+||+|...
T Consensus 127 --------~~G~~v~~vd~~d~e~l~~ai~~-~tklV~lesp~NptG~v~d----l~~I~~la~~~gi~lvvD~a~a~~- 192 (398)
T PRK07504 127 --------RYGIESTLVDGLDLDNWEKAVRP-NTKVFFLESPTNPTLEVID----IAAVAKIANQAGAKLVVDNVFATP- 192 (398)
T ss_pred --------hcCeEEEEECCCCHHHHHHhcCc-CceEEEEECCCCCCcEecC----HHHHHHHHHHcCCEEEEECCcccc-
Confidence 01123445555689999999964 5788888888777787776 999999999999999999999632
Q ss_pred cccccccccccCCCccee--eecccccC-Ccccc-cccccHHHHh-hccCCCccCCCCCcHHHHHHHHHHHHHhcC--hH
Q 013008 294 RTGYLWAHEHYGIFPDIM--TLAKPLAG-GLPIG-AALVTEKVAS-AINYGDHGSTFAGSPLVCNAAIAVLDKISN--PA 366 (451)
Q Consensus 294 r~G~~~~~~~~~~~pdi~--t~sK~lg~-G~~iG-~v~~~~~i~~-~~~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~ 366 (451)
..... ..+ ..|++ +++|.+++ |.++| +++++++++. .++..........+|+.++.++..|+.+.. +.
T Consensus 193 ~~~~~---~~~--gaDivv~S~sK~l~g~g~~~GG~vv~~~~~i~~~~~~~~~~~g~~~s~~~A~~~l~~L~tl~~R~~~ 267 (398)
T PRK07504 193 LFQKP---LEL--GAHIVVYSATKHIDGQGRCLGGVVLSDKAWIEEHLQDYFRHTGPSLSPFNAWTLLKGLETLPVRVRQ 267 (398)
T ss_pred ccCCc---hhh--CCCEEEeeccccccCCccceEEEEEeCcHHHHHHHHHHHHHhCCCCCHHHHHHHHhccchHHHHHHH
Confidence 11111 122 35665 56799986 78875 6667766554 232111112234678888888877765421 11
Q ss_pred H------HHHHHhCCCCcc------------------eecccceeEEEEecCC---hHHHHHHHH--HC-----Cc--ee
Q 013008 367 F------LASKLARNPHVK------------------DVRGLGLIIGIEFDVS---ATPVVDACR--DS-----GL--LV 410 (451)
Q Consensus 367 ~------~~~~~~~~~~~~------------------~v~g~G~~~~~~~~~~---~~~~~~~l~--~~-----Gv--~~ 410 (451)
. +.+.++.+|.+. ..+|.|.++.|+++.. ..+|.+.|. .. |+ ++
T Consensus 268 ~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~~~~~l~~~~~~~slG~~~sl~ 347 (398)
T PRK07504 268 QTESAAAIADFLAGHPKVARVIYPGRADHPQADIIAKQMTGGSTLVAFELKGGKEAAFRFLNALKIVRISNNLGDAKSLI 347 (398)
T ss_pred HHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHHhCCCCccEEEEEeCCCHHHHHHHHHhCCcceecccCCCCCeee
Confidence 1 111344555332 1245688999999422 223333331 11 11 01
Q ss_pred -eec---------------C-CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHh
Q 013008 411 -LTA---------------G-KGNVVRLVPPLIISEQELDQAVEILCKTLPVLD 447 (451)
Q Consensus 411 -~~~---------------~-~~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~~ 447 (451)
.|. | ..+.+|+++.+ |+.+.+++.|+++|++++
T Consensus 348 ~~p~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al~~~~ 397 (398)
T PRK07504 348 THPATTTHKNLSPEARAELGISEGFLRLSAGL----EDTDDLIEDLAAALKKVR 397 (398)
T ss_pred eCCCCCCcccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHHhhh
Confidence 111 0 12568886554 567777888888887654
No 266
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.75 E-value=1.7e-16 Score=156.64 Aligned_cols=267 Identities=18% Similarity=0.088 Sum_probs=154.9
Q ss_pred HHHHHHHHHHhhccCC----CeEEecCCHHHHHHHHHHHHHHHhhhc----CCCCCCCCceEEEEcCCccCChhhhhhcc
Q 013008 140 IPQIELAKRLVACSFA----DRVFFSNTGTEANEAAIKFARKFQRHS----NPDSKEPATEFVSFTNSFHGRTMGALALT 211 (451)
Q Consensus 140 ~~~~~l~~~l~~~~~~----e~v~~~~sG~eA~~~al~~a~~~~~~~----~~~~~~~~~~ii~~~~~yhg~~~~~~~~~ 211 (451)
..+.+++++++++++. +.++||+||++|+..++++++...... +.. ++++.+|+.+...|.....+....
T Consensus 38 ~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~h~~~~~~~~~~ 115 (345)
T cd06450 38 EMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGGR--GIDKLVIVCSDQAHVSVEKAAAYL 115 (345)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhccccc--ccCCeEEEEcCcchhHHHHHHHHH
Confidence 3366677777777774 379999999999999999887432100 000 012345555555666544433322
Q ss_pred CCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCC-----CCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEe
Q 013008 212 SKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQP-----GKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFD 286 (451)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~-----~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~D 286 (451)
+..... .+..++. ..|+++|++.+.+ .++.+|++.-.+++.|.+.+ +++|.++|++||+++|+|
T Consensus 116 g~~~~~---v~~~~~~----~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~----~~~i~~~~~~~~~~l~vD 184 (345)
T cd06450 116 DVKVRL---VPVDEDG----RMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDP----LEEIADLAEKYDLWLHVD 184 (345)
T ss_pred hcCeEE---eeeCCCC----CcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCC----HHHHHHHHHHhCCeEEEe
Confidence 221111 1111111 1388999998863 13455554444455676655 999999999999999999
Q ss_pred ccccCCCcccccccccccCC-Cccee--eecccccCCcccccccccHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhc
Q 013008 287 EVQCGLGRTGYLWAHEHYGI-FPDIM--TLAKPLAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKIS 363 (451)
Q Consensus 287 Ev~tg~gr~G~~~~~~~~~~-~pdi~--t~sK~lg~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~ 363 (451)
++|.++............++ ..|.+ +++|.+++++++|+++.+ .+.+.++ ++.+.
T Consensus 185 ~a~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~l~~p~g~g~~~~~-------------------~~~~~~~---l~~l~ 242 (345)
T cd06450 185 AAYGGFLLPFPEPRHLDFGIERVDSISVDPHKYGLVPLGCSAVLVR-------------------ALKLWAT---LRRFG 242 (345)
T ss_pred chhhHHHhhChhhHHHhcCccccCEEEEchhHhhCCCcchHHHHHH-------------------HHHHHHH---HHHHh
Confidence 99975422111000000111 35644 567988777888887665 2222233 33222
Q ss_pred ChHHH---HH----------HHhCCCCccee-cccceeEEEEecC------ChHHHHHHHHHCCceeeecC---CCCEEE
Q 013008 364 NPAFL---AS----------KLARNPHVKDV-RGLGLIIGIEFDV------SATPVVDACRDSGLLVLTAG---KGNVVR 420 (451)
Q Consensus 364 ~~~~~---~~----------~~~~~~~~~~v-~g~G~~~~~~~~~------~~~~~~~~l~~~Gv~~~~~~---~~~~ir 420 (451)
...+. ++ .+++++.+..+ ...+.++.|.+.. ...++.+.|.++|+++.+.. .+..+|
T Consensus 243 ~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~iv~f~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~~~~~lR 322 (345)
T cd06450 243 RDGYGEHIDRIVDLAKYLAELIRADPGFELLGEPNLSLVCFRLKPSVKLDELNYDLSDRLNERGGWHVPATTLGGPNVLR 322 (345)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceeEEEEEECCcchhhHHHHHHHHHHHhcCCEEEEeeEECCeEEEE
Confidence 22111 11 23444433222 2334555665532 34678899999976554321 136799
Q ss_pred EeCCCCC-CHHHHHHHHHHHHH
Q 013008 421 LVPPLII-SEQELDQAVEILCK 441 (451)
Q Consensus 421 i~~~~~~-t~e~i~~~l~~l~~ 441 (451)
+++...+ |++|++++++.|++
T Consensus 323 is~~~~~~t~~di~~l~~~l~~ 344 (345)
T cd06450 323 FVVTNPLTTRDDADALLEDIER 344 (345)
T ss_pred EEecCCCCCHHHHHHHHHHHHh
Confidence 9988765 99999999999875
No 267
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.75 E-value=5.3e-16 Score=154.74 Aligned_cols=296 Identities=18% Similarity=0.197 Sum_probs=196.0
Q ss_pred CCCCCHHHHHHHHHHHhhccccc--CCC-CC----HHHHHHHHHHhhccC--C-CeEEecCCHHHHHHHHHHHHHHHhhh
Q 013008 112 LGHGDADWIKAVVDQANVLTHVS--NMY-YS----IPQIELAKRLVACSF--A-DRVFFSNTGTEANEAAIKFARKFQRH 181 (451)
Q Consensus 112 lG~~~p~v~~a~~~~~~~~~~~~--~~~-~~----~~~~~l~~~l~~~~~--~-e~v~~~~sG~eA~~~al~~a~~~~~~ 181 (451)
.|..++.|.+++.+.+....... ... .. +...+..+.++++++ . +.|+|++++++|++.++..+.....
T Consensus 8 ~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~lg~~~~~~v~~~~~~t~a~~~~~~~l~~~~~- 86 (371)
T PF00266_consen 8 TGPMPKSVLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLLGAPPDEEVVFTSNGTEALNAVASSLLNPLK- 86 (371)
T ss_dssp S-B-BHHHHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHHTSSTTEEEEEESSHHHHHHHHHHHHHHHGT-
T ss_pred ccCCCHHHHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhcCCccccccccccccchhhhhhhhccccccc-
Confidence 45688999999999877532211 111 11 225677788888887 4 6799999999999999998753221
Q ss_pred cCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeC-----CCHHHHHHhcCCCCeEEEEEcccc
Q 013008 182 SNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEY-----GNIEATRKLIQPGKTAAVFVEPIQ 256 (451)
Q Consensus 182 ~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~le~~l~~~~~aavi~ep~~ 256 (451)
++++|++.+..|++............ ...+..++. -|++++++.|. .++.+|++.-+.
T Consensus 87 -------~g~~vl~~~~~~~s~~~~~~~~~~~~---------g~~v~~i~~~~~~~~~~~~~~~~l~-~~~~lv~~~~~~ 149 (371)
T PF00266_consen 87 -------PGDEVLVTSNEHPSNRYPWEEIAKRK---------GAEVRVIPADPGGSLDLEDLEEALN-PDTRLVSISHVE 149 (371)
T ss_dssp -------TTCEEEEEESSHHHHHHHHHHHHHHT---------TEEEEEEEEGTTSSCSHHHHHHHHH-TTESEEEEESBE
T ss_pred -------cccccccccccccccccccccccccc---------hhhhccccccccchhhhhhhhhhhc-cccceEEeeccc
Confidence 58899999988876652222111000 011222221 27899999996 578999999988
Q ss_pred CCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccccccCCCcceeeec--ccccCCcccccccccHHHHh
Q 013008 257 GEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLA--KPLAGGLPIGAALVTEKVAS 334 (451)
Q Consensus 257 ~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~t~s--K~lg~G~~iG~v~~~~~i~~ 334 (451)
+..|.+.| +++|.++|+++|+++++|-+++ +|..- .+.....+|++++| | ++|+..+|++..+++.++
T Consensus 150 ~~tG~~~p----i~~I~~~~~~~~~~~~vD~~~~-~g~~~----id~~~~~~D~~~~s~~K-l~gp~G~g~l~v~~~~~~ 219 (371)
T PF00266_consen 150 NSTGVRNP----IEEIAKLAHEYGALLVVDAAQS-AGCVP----IDLDELGADFLVFSSHK-LGGPPGLGFLYVRPEAIE 219 (371)
T ss_dssp TTTTBBSS----HHHHHHHHHHTTSEEEEE-TTT-TTTSS------TTTTTESEEEEESTS-TTSSSTEEEEEEEHHHHH
T ss_pred ccccEEee----eceehhhhhccCCceeEechhc-ccccc----ccccccccceeeecccc-cCCCCchhhheehhhhhh
Confidence 88898888 9999999999999999999986 54331 22223457888776 9 887667899999999888
Q ss_pred hccCCCccCC------------------C---CCcHHHHHHHHHHHHHhcChHH---HHH----------HHhCCCCcce
Q 013008 335 AINYGDHGST------------------F---AGSPLVCNAAIAVLDKISNPAF---LAS----------KLARNPHVKD 380 (451)
Q Consensus 335 ~~~~~~~~~t------------------~---~~~~~~~aaa~aal~~~~~~~~---~~~----------~~~~~~~~~~ 380 (451)
.+.+...+.. | +.+.....+..++++.+.+.++ .++ .++.++.+..
T Consensus 220 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~~~~~l~~~~~~~~ 299 (371)
T PF00266_consen 220 RLRPAKPGGGYLDFPSLQEYGLADDARRFEGGTPNVPAIYALNEALKLLEEIGIERIRERIRELAEYLREALEELPGIEV 299 (371)
T ss_dssp HHHTSSSSSSTTTHHHHHHHCHHSTTTGSSSSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTEEE
T ss_pred ccccccccccccccccchhcccccccccccccceeeehhhhHHHHHhhhhccccccchhhhhhHHHHHHhhhhcCCceeE
Confidence 8754321111 1 2345556666677777633222 222 2334553322
Q ss_pred -----ecccceeEEEEe-cCChHHHHHHHHHCCceeeecCC-----------CCEEEEeCCCCCCHHHHHHH
Q 013008 381 -----VRGLGLIIGIEF-DVSATPVVDACRDSGLLVLTAGK-----------GNVVRLVPPLIISEQELDQA 435 (451)
Q Consensus 381 -----v~g~G~~~~~~~-~~~~~~~~~~l~~~Gv~~~~~~~-----------~~~iri~~~~~~t~e~i~~~ 435 (451)
-...+.++.+.+ ..+...+.+.|.++||.+..+.. ++.+|+++....|+||||++
T Consensus 300 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~L~~~~I~~~~G~~~~~~~~~~~~~~~~iRvS~~~~nt~~dv~~l 371 (371)
T PF00266_consen 300 LGPDDEPRRPSIVSFNLPGSDADDVVKYLEERGIAVSTGSACAGPSLDILGMGGVIRVSLHYYNTEEDVDRL 371 (371)
T ss_dssp SSSSCGGBGTTEEEEEETTSSHHHHHHHHHHHTEEEEESTTTCHHHHHHHHTTTEEEEE-GTTSSHHHHHHH
T ss_pred eeecccccccceEEEeecCCCHHHHHHHHhhcCEEEeccCcccHHHHHHhCCCCEEEEeccCCCCHHHHhhC
Confidence 123466677777 35678899999999999987432 26899999999999999875
No 268
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.74 E-value=3.1e-16 Score=156.18 Aligned_cols=198 Identities=18% Similarity=0.145 Sum_probs=139.5
Q ss_pred cCCCCCHHHHHHHHHHhhccCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCC
Q 013008 134 SNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK 213 (451)
Q Consensus 134 ~~~~~~~~~~~l~~~l~~~~~~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~ 213 (451)
+..++++...+|+++|++..+.+.+++++||++|+..+++... .++|+|++.+++|.+.......+...
T Consensus 45 Y~R~~~p~~~~le~~lA~l~g~~~v~~~~gg~~Ai~~~l~all-----------~~GD~Vl~~~p~y~~~~~~~~~~~~~ 113 (382)
T TIGR02080 45 YSRSGNPTRDLLQQALAELEGGAGAVVTNTGMSAIHLVTTALL-----------GPDDLLVAPHDCYGGTYRLLNALAKK 113 (382)
T ss_pred ccCCCCchHHHHHHHHHHHhCCCcEEEEcCHHHHHHHHHHHHc-----------CCCCEEEEcCCCcHHHHHHHHHHHhh
Confidence 4566777789999999999988899999999999999998664 26899999999997644322111111
Q ss_pred CCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCC
Q 013008 214 EHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLG 293 (451)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~g 293 (451)
. ...+.+++..|++++++++++ ++++|+++.++++.|.+.+ +++|.++|+++|+++|+||+|..+-
T Consensus 114 ~---------~~~v~~~d~~d~~~l~~ai~~-~tklV~l~~p~NPtG~~~d----l~~I~~la~~~g~~vvvD~a~~~~~ 179 (382)
T TIGR02080 114 G---------CFRVLFVDQGDEQALRAALAQ-KPKLVLIETPSNPLLRVVD----IAKICHLAKAVGAVVVVDNTFLSPA 179 (382)
T ss_pred c---------CeEEEEECCCCHHHHHHhcCc-CceEEEEECCCCCCCEecC----HHHHHHHHHHcCCEEEEECCCcccc
Confidence 0 012233344589999999975 5778888877777777666 8999999999999999999995321
Q ss_pred cccccccccccCCCccee--eecccccC--Ccccccccc-cHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHh
Q 013008 294 RTGYLWAHEHYGIFPDIM--TLAKPLAG--GLPIGAALV-TEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKI 362 (451)
Q Consensus 294 r~G~~~~~~~~~~~pdi~--t~sK~lg~--G~~iG~v~~-~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~ 362 (451)
.. .. .....|++ +++|.++| ++..|++++ ++++.+.+.......+...+|+.+..++..++.+
T Consensus 180 ~~-~p-----l~~gaDivv~S~sK~l~G~~~~~~G~i~~~~~~~~~~l~~~~~~~g~~~sp~~a~l~lr~l~tl 247 (382)
T TIGR02080 180 LQ-NP-----LALGADLVLHSCTKYLNGHSDVIAGAVIAKDPQVAEELAWWANNLGVTGGAFDSYLTLRGLRTL 247 (382)
T ss_pred cC-Cc-----hhhCCCEEEeecceeccCCCCceeEEEEeCCHHHHHHHHHHHHccCCCCCHHHHHHHHcccchH
Confidence 11 11 11224555 67899975 478898876 5777776653333334567888887776666543
No 269
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=99.74 E-value=4.6e-16 Score=148.41 Aligned_cols=266 Identities=14% Similarity=0.078 Sum_probs=182.9
Q ss_pred eEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCC---
Q 013008 157 RVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYG--- 233 (451)
Q Consensus 157 ~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 233 (451)
.+++|+|.+.+.+.+++++.. .++.|++-..+|...... + .+....+..++.+
T Consensus 126 diiit~G~t~~l~~~l~~~~N-----------~gd~vlie~~ty~~AL~s-~------------~a~gv~~ipv~md~~G 181 (472)
T KOG0634|consen 126 DIIITNGNTDGLFKVLRTLIN-----------RGDHVLIEEYTYPSALQS-M------------EALGVKIIPVKMDQDG 181 (472)
T ss_pred eEEEecCCchHHHHHHHHhhc-----------CCCceEEecccchHHHHh-c------------cccCceEEeccccCCC
Confidence 799999999999999998883 688999999999654322 1 1221122222222
Q ss_pred -CHHHHHHhcCC--------CCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcc---cc----
Q 013008 234 -NIEATRKLIQP--------GKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRT---GY---- 297 (451)
Q Consensus 234 -d~~~le~~l~~--------~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~---G~---- 297 (451)
++|.|++.+.. .+.....+-|...|+.+...+.+-.++|.+||+|||+++|.||+|--+-.. +.
T Consensus 182 i~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDdpYy~Lq~~~y~~~~~~~ 261 (472)
T KOG0634|consen 182 IDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDDPYYFLQMNTYNPSLELE 261 (472)
T ss_pred CCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEecCccceeeccccCCCcccc
Confidence 68999999861 236788888864443334679999999999999999999999998433211 10
Q ss_pred --ccc--------------ccccCCCcceeeecccccCCcccccccccHHHHhhccCCCccCCCCCcHHHHHHHHHHHHH
Q 013008 298 --LWA--------------HEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDK 361 (451)
Q Consensus 298 --~~~--------------~~~~~~~pdi~t~sK~lg~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~ 361 (451)
.+. .+-.|.+...-+|||-++.|+|+||+.+++.+++++-......|-+.+.+++....+.|+.
T Consensus 262 ~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiiaPGlRlG~it~~~~~l~ril~~ae~~t~~pSg~sq~iv~a~l~~ 341 (472)
T KOG0634|consen 262 SPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIAPGLRLGWITGNSLFLKRILDLAEVATSGPSGFSQGIVYAMLKR 341 (472)
T ss_pred CccccHHHHHHhhcCCcccccccccEEeccchhhhhcCcceeEEeecCHHHHHHHhhhcceeecCcccccHHHHHHHHHH
Confidence 011 1111222334489999999999999999998887765444455666777888888888877
Q ss_pred hcChHHHHH------------------HHhCCC-C--cceecccceeEEEEec-------CC----hHHHHHHHHHCCce
Q 013008 362 ISNPAFLAS------------------KLARNP-H--VKDVRGLGLIIGIEFD-------VS----ATPVVDACRDSGLL 409 (451)
Q Consensus 362 ~~~~~~~~~------------------~~~~~~-~--~~~v~g~G~~~~~~~~-------~~----~~~~~~~l~~~Gv~ 409 (451)
.-.+++++. +-+.+| . .-..+..|+|+|++++ .. ...+...+.++||.
T Consensus 342 wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~kylp~~~~~~~~P~aGmFiwv~i~~~~~~~~~~i~q~~e~i~~~~vk~gV~ 421 (472)
T KOG0634|consen 342 WGQEGFLRWIQHLRSSYTERRNALLSALDKYLPKSVCEYHPPKAGMFIWVEIPYINFDTKKSINQIEEIIFIKAVKNGVK 421 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeEEecCCcceEEEEEecccccccccchHHHHHHHHHHHHHCCeE
Confidence 655544332 224455 2 1224556999999884 11 12355667789999
Q ss_pred eeecCC---------CC-EEEEeCCCCCCHHHHHHHHHHHHHHHHHHh
Q 013008 410 VLTAGK---------GN-VVRLVPPLIISEQELDQAVEILCKTLPVLD 447 (451)
Q Consensus 410 ~~~~~~---------~~-~iri~~~~~~t~e~i~~~l~~l~~~l~~~~ 447 (451)
+.++.. .. ++|++.+++ ..|+++++++|+..++++--
T Consensus 422 ~v~G~~F~v~p~~s~~kiffRls~a~a-~~e~l~~g~~rf~~~ike~f 468 (472)
T KOG0634|consen 422 LVCGSWFMVDPESSWSKIFFRLSIAFA-EPEKLDEGIERFGSVIKEHF 468 (472)
T ss_pred EecCceeEEcCccCCCcceEEEEeecC-CHHHHHHHHHHHHHHHHHHh
Confidence 886631 12 789988876 77899999999999998753
No 270
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.74 E-value=4.3e-16 Score=154.76 Aligned_cols=279 Identities=15% Similarity=0.132 Sum_probs=174.1
Q ss_pred cCCCCCHHHHHHHHHHhhccCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCC
Q 013008 134 SNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK 213 (451)
Q Consensus 134 ~~~~~~~~~~~l~~~l~~~~~~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~ 213 (451)
+....++...+|+++++++.+.+.+++++||++|+..++..+. +++|+||+.++.|.+.........
T Consensus 55 Y~r~~npt~~~Le~~iA~le~~~~~~~~~sG~~Ai~~~l~all-----------~~GD~Vvv~~~~Y~~t~~l~~~~l-- 121 (394)
T PRK09028 55 YGRRGTPTHFAFQAAIVELEGGAGTALYPSGAAAISNALLSFL-----------KAGDHLLMVDSCYEPTRDLCDKIL-- 121 (394)
T ss_pred ecCCCCchHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHh-----------CCCCEEEEECCCcHHHHHHHHHhh--
Confidence 3444455678999999999887789999999999999988654 268999999999976643221100
Q ss_pred CCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCC
Q 013008 214 EHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLG 293 (451)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~g 293 (451)
......+.+++..|.+.+++++.+ ++++|++|.+.++.|.+.+ +++|.++|++||+++|+||+|+.
T Consensus 122 -------~~~Gi~v~~v~~~~~e~l~~~l~~-~TklV~lespsNPtg~v~d----l~~I~~la~~~g~~lvvD~t~a~-- 187 (394)
T PRK09028 122 -------KGFGIETTYYDPMIGEGIRELIRP-NTKVLFLESPGSITMEVQD----VPTLSRIAHEHDIVVMLDNTWAS-- 187 (394)
T ss_pred -------hhcceEEEEECCCCHHHHHHhcCc-CceEEEEECCCCCCCcHHH----HHHHHHHHHHcCCEEEEECCccc--
Confidence 011123445555677889998864 6789999988777776655 99999999999999999999952
Q ss_pred cccccccccccCCCccee--eecccccC-C-cccccccccHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcC--hHH
Q 013008 294 RTGYLWAHEHYGIFPDIM--TLAKPLAG-G-LPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISN--PAF 367 (451)
Q Consensus 294 r~G~~~~~~~~~~~pdi~--t~sK~lg~-G-~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~ 367 (451)
+. .+.-..+..|++ +..|.++| | .-.|+++.++++.+.+...........+|..+...+..|+.+.- +..
T Consensus 188 --p~--~~~Pl~~GaDivv~S~tK~l~Gh~d~~~G~~~~~~~~~~~l~~~~~~~G~~~~p~~a~l~~rgl~TL~lR~~~~ 263 (394)
T PRK09028 188 --PI--NSRPFEMGVDISIQAATKYIVGHSDVMLGTATANEKHWDQLREHSYLMGQCTSPDDVYLAMRGLRTLGVRLAQH 263 (394)
T ss_pred --cc--cCCccccCceEEEEeCCeEecCCCCEEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHcccCcHHHHHHHH
Confidence 11 122223456776 45699986 4 77788777777766554221111223567776665554443210 111
Q ss_pred ------HHHHHhCCCCccee------------------cccceeEEEEec-CCh---HHHHHHHH--HCCc--------e
Q 013008 368 ------LASKLARNPHVKDV------------------RGLGLIIGIEFD-VSA---TPVVDACR--DSGL--------L 409 (451)
Q Consensus 368 ------~~~~~~~~~~~~~v------------------~g~G~~~~~~~~-~~~---~~~~~~l~--~~Gv--------~ 409 (451)
+.++++.+|.+..| .|.|.++.|+++ ... .+|.+.|. ..+. +
T Consensus 264 ~~na~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~~~~~~~~~f~~~l~l~~~~~slG~~~sLv 343 (394)
T PRK09028 264 EKNALKVANWLATRPEVDHVRHPAFETCPGHEFFKRDFSGSNGLFSFVLKQGDPKAVTALVEGMQHFKMGFSWGGFESLI 343 (394)
T ss_pred HHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhccCCCceEEEEECCCCHHHHHHHHHhCCcceEecccCCCccee
Confidence 11155556644332 356789999985 222 23433332 1111 1
Q ss_pred eeec-----------C-CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHh
Q 013008 410 VLTA-----------G-KGNVVRLVPPLIISEQELDQAVEILCKTLPVLD 447 (451)
Q Consensus 410 ~~~~-----------~-~~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~~ 447 (451)
..|. + .++.+||++.+ |+.+.+++.|+++|+..+
T Consensus 344 ~~p~~~~~~~~~~~~~~~~~liR~svGl----Ed~~dLi~Dl~~Al~~~~ 389 (394)
T PRK09028 344 LGVFGINKLRTATNWDFSKPLIRLHIGL----EDVDDLIADLEAGFERYN 389 (394)
T ss_pred ECCCCcCccCchhhhcCCCCeEEEEeCc----CCHHHHHHHHHHHHHHHH
Confidence 1111 0 12568887665 456666777777776554
No 271
>PRK06460 hypothetical protein; Provisional
Probab=99.74 E-value=4.7e-16 Score=154.77 Aligned_cols=278 Identities=18% Similarity=0.191 Sum_probs=168.9
Q ss_pred cCCCCCHHHHHHHHHHhhccCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCC
Q 013008 134 SNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK 213 (451)
Q Consensus 134 ~~~~~~~~~~~l~~~l~~~~~~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~ 213 (451)
+....++...+|+++++++.+.+..+.++||++|+..++..+. .++|+||+.++.|.+.........
T Consensus 39 y~r~~~p~~~~L~~~lA~l~g~~~~v~~~sG~~ai~~~l~al~-----------~~Gd~Vl~~~~~~~~ty~~~~~~~-- 105 (376)
T PRK06460 39 YSREANPTVLELTKKIVELENAEMGVAFSSGMGAISTTALALL-----------KPGNSVLVHRDMFGRSYRFFTDYL-- 105 (376)
T ss_pred eeCCCCccHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHHh-----------CCCCEEEEecCCcCcHHHHHHHHH--
Confidence 3445566688999999999986666677889999999888654 168899998877644321111100
Q ss_pred CCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCC
Q 013008 214 EHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLG 293 (451)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~g 293 (451)
......+..++.++.+.++++++ .++++|+++.++++.|.+.+ +++|.++|++||+++|+||+|...
T Consensus 106 -------~~~G~~v~~~~~~~~~~l~~~~~-~~tklV~l~sp~NPtG~v~d----~~~I~~la~~~g~~vivDea~~~~- 172 (376)
T PRK06460 106 -------KNWGVNVDASNPGSDNIIEKAKS-KRYDVVFVENITNPLLRVVD----ITELSKVCKENGSILIVDATFSTP- 172 (376)
T ss_pred -------HhhCcEEEEECCCCHHHHHHhcC-CCceEEEEECCCCCCCcccC----HHHHHHHHHHcCCEEEEECCcCcc-
Confidence 00112244455556666666654 46788888888888887776 788999999999999999998632
Q ss_pred cccccccccccCCCccee--eecccccC--CcccccccccHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcC--hH-
Q 013008 294 RTGYLWAHEHYGIFPDIM--TLAKPLAG--GLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISN--PA- 366 (451)
Q Consensus 294 r~G~~~~~~~~~~~pdi~--t~sK~lg~--G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~- 366 (451)
..... . .++ .|++ +++|.++| +.++|++++++++++.+.......+.+.+|..+..++..++.++. +.
T Consensus 173 ~~~~~--l-~~~--~divv~S~sK~l~G~~~~~~G~~~~~~~l~~~l~~~~~~~g~~~~~~~a~~~l~~~~~l~~r~~~~ 247 (376)
T PRK06460 173 INQKP--L-ELG--ADIVVHSASKFLAGHNDVIAGLAAGYGKLLNVIDQMRRTLGTSLDPHAAYLTLRGIKTLKIRMDVI 247 (376)
T ss_pred ccCCh--h-hcC--CCEEEeecceeccCCCCceEEEEecCHHHHHHHHHHHHhcCCCCCHHHHHHHHhchhhHHHHHHHH
Confidence 11111 1 123 4554 78899975 367999999999988875433233344556555554444433311 11
Q ss_pred -----HHHHHHhCCCCcce------------------ecccceeEEEEecCC---hHHHHHHHH--HCC-----c---ee
Q 013008 367 -----FLASKLARNPHVKD------------------VRGLGLIIGIEFDVS---ATPVVDACR--DSG-----L---LV 410 (451)
Q Consensus 367 -----~~~~~~~~~~~~~~------------------v~g~G~~~~~~~~~~---~~~~~~~l~--~~G-----v---~~ 410 (451)
.+.+.++++|.+.. ..+.|.++.|+++.. ..+|.+.|. ..+ + +.
T Consensus 248 ~~n~~~l~~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~s~~~~~~~~~~~~~~~~l~~~~~~~s~Gg~~sl~~ 327 (376)
T PRK06460 248 NRNAEQIAEFLEGHPKVVKVYYPGLKSHVDYEIARRVLKGFGGVLSFEVNGGQESALKVMKSLKLIIPAQTLGGVNSVIS 327 (376)
T ss_pred HHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCcHHHHHHHHHhCCcceeccCCCCCceEEe
Confidence 11113344453322 246688999998533 233444331 111 1 11
Q ss_pred eec---------------C-CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 013008 411 LTA---------------G-KGNVVRLVPPLIISEQELDQAVEILCKTLPVL 446 (451)
Q Consensus 411 ~~~---------------~-~~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~ 446 (451)
.|. | ..+.+|+++.+ ||.+.+++.|+++|+.+
T Consensus 328 ~p~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al~~~ 375 (376)
T PRK06460 328 HPATMSHRTLSLEERKIVGITDSLLRLSVGI----EDVNDLIEDLDRALSTL 375 (376)
T ss_pred CccccccccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHHhh
Confidence 111 0 12568886554 56777888888888654
No 272
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.74 E-value=6.5e-16 Score=155.46 Aligned_cols=303 Identities=17% Similarity=0.107 Sum_probs=189.1
Q ss_pred CCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHhhccC---CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCc
Q 013008 115 GDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSF---ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPAT 191 (451)
Q Consensus 115 ~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~---~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~ 191 (451)
-+++|++|+.+.... +. .........++.++++++++ .+.+++++||+++++.++.... +++|
T Consensus 20 ~~~~V~~a~~~~~~~--~~-~~~~~~~~~~~~~~l~~~~g~~~~~~vi~~~~gt~a~~~a~~~~~-----------~~Gd 85 (401)
T PLN02409 20 IPERVLRAMNRPNED--HR-SPAFPALTKELLEDVKYIFKTKSGTPFIFPTTGTGAWESALTNTL-----------SPGD 85 (401)
T ss_pred CCHHHHHHhcCCCCC--CC-CHHHHHHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHhcC-----------CCCC
Confidence 456777766543211 11 11122336677788888876 2468999999999999887543 2689
Q ss_pred eEEEEcCCccCChhhhh-hccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCC---CCeEEEEEccccCCCCccccCHH
Q 013008 192 EFVSFTNSFHGRTMGAL-ALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQP---GKTAAVFVEPIQGEGGIYSATKE 267 (451)
Q Consensus 192 ~ii~~~~~yhg~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~---~~~aavi~ep~~~~~G~~~~~~~ 267 (451)
+||+.+++|++...... ...+..... .+...+.. -|++++++.++. +++++|++..+.+.+|.+.+
T Consensus 86 ~Vlv~~~~~~~~~~~~~~~~~g~~v~~---v~~~~~~~----~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~--- 155 (401)
T PLN02409 86 KVVSFRIGQFSLLWIDQMQRLNFDVDV---VESPWGQG----ADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTND--- 155 (401)
T ss_pred EEEEeCCCchhHHHHHHHHHcCCceEE---EECCCCCC----CCHHHHHHHHhhCcCCCccEEEEEeecccccccCC---
Confidence 99999988866432111 111111100 01111100 268999999974 36788888777667787776
Q ss_pred HHHHHHHH--HHHhCCEEEEeccccCCCcccccccccccCCCcceee--ecccccCCcccccccccHHHHhhccCCC---
Q 013008 268 FLQFLRDA--CDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMT--LAKPLAGGLPIGAALVTEKVASAINYGD--- 340 (451)
Q Consensus 268 ~l~~l~~l--~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~t--~sK~lg~G~~iG~v~~~~~i~~~~~~~~--- 340 (451)
+++|.++ |++||+++|+|++++ +|. .....+ ....|+++ .+|++++..++|++++++++++.+.+..
T Consensus 156 -~~~i~~l~~~~~~g~~~vvD~v~s-~g~--~~id~~--~~~~D~~~~s~~K~l~~P~G~G~l~~~~~~~~~~~~~~~~~ 229 (401)
T PLN02409 156 -LAGVRKLLDCAQHPALLLVDGVSS-IGA--LDFRMD--EWGVDVALTGSQKALSLPTGLGIVCASPKALEASKTAKSPR 229 (401)
T ss_pred -HHHHHHHHhhhccCcEEEEEcccc-cCC--cccccc--ccCccEEEEcCccccCcCCCcceeEECHHHHHHHhcCCCCC
Confidence 7777777 999999999999986 532 112222 23456654 5699987567999999998887764321
Q ss_pred ------------ccC---CCCCcHHHHHHHHHHHHHhcChHH---HHH----------HHhCCC--Cccee-cc-cceeE
Q 013008 341 ------------HGS---TFAGSPLVCNAAIAVLDKISNPAF---LAS----------KLARNP--HVKDV-RG-LGLII 388 (451)
Q Consensus 341 ------------~~~---t~~~~~~~~aaa~aal~~~~~~~~---~~~----------~~~~~~--~~~~v-~g-~G~~~ 388 (451)
..+ .++.+...+.+..++++.+.+.++ .++ .++..+ .+..- .. .+.+.
T Consensus 230 ~~~~~~~~~~~~~~g~~~~~Tp~~~~~~al~~al~~~~~~G~e~i~~~~~~l~~~l~~~L~~~g~~~~~~~~~~~s~~v~ 309 (401)
T PLN02409 230 VFFDWADYLKFYKLGTYWPYTPSIQLLYGLRAALDLIFEEGLENVIARHARLGEATRLAVEAWGLKLCTKKPEWRSDTVT 309 (401)
T ss_pred eecCHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCeeccCChhhcccceE
Confidence 011 234555667778888887644322 121 122222 11110 11 22344
Q ss_pred EEEec--CChHHHHHHHH-HCCceeeecC---CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHh
Q 013008 389 GIEFD--VSATPVVDACR-DSGLLVLTAG---KGNVVRLVPPLIISEQELDQAVEILCKTLPVLD 447 (451)
Q Consensus 389 ~~~~~--~~~~~~~~~l~-~~Gv~~~~~~---~~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~~ 447 (451)
++.+. .+..++.+.|+ +.|+.+.++. .+..+|+...-.++++++..++++|++++.++.
T Consensus 310 ~~~~p~~~~~~~l~~~l~~~~~i~i~~G~~~~~~~~~Rig~~g~~~~~~~~~~~~~~~~~l~~~g 374 (401)
T PLN02409 310 AVVVPEGIDSAEIVKNAWKKYNLSLGLGLNKVAGKVFRIGHLGNVNELQLLGALAGVEMVLKDVG 374 (401)
T ss_pred EEeCCCCCCHHHHHHHHHHhCCEEEEcCCCcccCCEEEEcCCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 55542 35567887776 5699888663 257899998888899999999999999998754
No 273
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.74 E-value=6.4e-16 Score=152.91 Aligned_cols=284 Identities=20% Similarity=0.199 Sum_probs=176.0
Q ss_pred HHHHHHHhhcccccCCCCCHHHHHHHHHHhhccCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCc
Q 013008 121 KAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSF 200 (451)
Q Consensus 121 ~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~y 200 (451)
+++.+.+....+ ...+...++++.++++++.+.+++++||++|+..+++.+.. .++++||+..++|
T Consensus 3 ~~~~~~~~~~~~----~~~~~~~~~~~~la~~~~~~~~~~~~sgt~al~~~l~~l~~----------~~gd~vl~~~~~~ 68 (352)
T cd00616 3 EAVEEVLDSGWL----TLGPKVREFEKAFAEYLGVKYAVAVSSGTAALHLALRALGI----------GPGDEVIVPSFTF 68 (352)
T ss_pred HHHHHHHHcCCc----cCCHHHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHcCC----------CCCCEEEeCCcch
Confidence 455555554222 33455889999999999988999999999999999987631 1578999999999
Q ss_pred cCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhC
Q 013008 201 HGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAG 280 (451)
Q Consensus 201 hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g 280 (451)
|+........+....+ .+..+.. ...|++++++.+.+ ++++|++..+ .|...+ +++|+++|++||
T Consensus 69 ~~~~~~~~~~g~~~~~----~~~~~~~---~~~d~~~l~~~i~~-~~~~v~~~~~---~G~~~~----~~~i~~l~~~~~ 133 (352)
T cd00616 69 VATANAILLLGATPVF----VDIDPDT---YNIDPELIEAAITP-RTKAIIPVHL---YGNPAD----MDAIMAIAKRHG 133 (352)
T ss_pred HHHHHHHHHcCCeEEE----EecCCCc---CCcCHHHHHHhcCc-CCeEEEEECC---CCCcCC----HHHHHHHHHHcC
Confidence 8765433222211110 1111100 01278999998864 5677776543 454444 899999999999
Q ss_pred CEEEEeccccCCCcccccccccccCCCcceeeec----ccccCCccccccccc-HHHHhhccCC----C-----------
Q 013008 281 ALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLA----KPLAGGLPIGAALVT-EKVASAINYG----D----------- 340 (451)
Q Consensus 281 ~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~t~s----K~lg~G~~iG~v~~~-~~i~~~~~~~----~----------- 340 (451)
+++|+|++|+ +|.... ....+...|+.++| |.+++| ..|+++.+ +++.+.++.. .
T Consensus 134 i~li~D~a~~-~g~~~~---~~~~~~~~d~~~~S~~~~K~~~~~-~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (352)
T cd00616 134 LPVIEDAAQA-LGATYK---GRKVGTFGDAGAFSFHPTKNLTTG-EGGAVVTNDEELAERARLLRNHGRDRDRFKYEHEI 208 (352)
T ss_pred CeEEEECCCC-CCCeEC---CEEcccCcceeEEcCCCCCCCccc-CceEEEECCHHHHHHHHHHHHcCCCCCCCccccce
Confidence 9999999996 432211 11223335666665 989543 45777665 5766654321 0
Q ss_pred ccCCCCCcHHHHHHHHHHHHHhcChHHHHH----------HHhCCCCcceecc------cceeEEEEec----CChHHHH
Q 013008 341 HGSTFAGSPLVCNAAIAVLDKISNPAFLAS----------KLARNPHVKDVRG------LGLIIGIEFD----VSATPVV 400 (451)
Q Consensus 341 ~~~t~~~~~~~~aaa~aal~~~~~~~~~~~----------~~~~~~~~~~v~g------~G~~~~~~~~----~~~~~~~ 400 (451)
.+.++..+++.++.++..++.++ .+.++ .++.++.+..+.. ...++.+.++ ....++.
T Consensus 209 ~~~~~~~~~~~aa~~~~~l~~~~--~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 286 (352)
T cd00616 209 LGYNYRLSEIQAAIGLAQLEKLD--EIIARRREIAERYKELLADLPGIRLPDVPPGVKHSYHLYVIRLDPEAGESRDELI 286 (352)
T ss_pred eeeccCcCHHHHHHHHHHHHhhH--HHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceeeEEEEEEECCcCCCCHHHHH
Confidence 11233456777777766555432 12111 2333443322211 1234444443 3567899
Q ss_pred HHHHHCCceeeecCC--------------------------CCEEEEeCCCCCCHHHHHHHHHHHH
Q 013008 401 DACRDSGLLVLTAGK--------------------------GNVVRLVPPLIISEQELDQAVEILC 440 (451)
Q Consensus 401 ~~l~~~Gv~~~~~~~--------------------------~~~iri~~~~~~t~e~i~~~l~~l~ 440 (451)
+.|.++||.+..... .+.+|+.+....|++|++.++++|+
T Consensus 287 ~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~l~~~~~~t~~di~~i~~~l~ 352 (352)
T cd00616 287 EALKEAGIETRVHYPPLHHQPPYKKLLGYPPGDLPNAEDLAERVLSLPLHPSLTEEEIDRVIEALR 352 (352)
T ss_pred HHHHHCCCCeeeecCccccCHhhhhccCCCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHhC
Confidence 999999997652100 0468998888999999999998874
No 274
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.73 E-value=2.8e-16 Score=155.35 Aligned_cols=274 Identities=16% Similarity=0.151 Sum_probs=174.5
Q ss_pred ccCCCCCHHHHHHHHHHhhccCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccC
Q 013008 133 VSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTS 212 (451)
Q Consensus 133 ~~~~~~~~~~~~l~~~l~~~~~~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~ 212 (451)
.+..+.++...+|+++|+++.+.+.++.++||++|+.+++.++. ++|+||+..+.|++.........
T Consensus 47 ~Y~R~~~p~~~~le~~lA~leg~~~~v~~~sG~aAi~~~l~~l~------------~GD~VI~~~~~yg~~~~~~~~~~- 113 (364)
T PRK07269 47 DYTRTKNPTRAKLEETLAAIESADYALATSSGMSAIVLAFSVFP------------VGSKVVAVRDLYGGSFRWFNQQE- 113 (364)
T ss_pred ceeCCCCccHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHhC------------CCCEEEEecCCcCchHHHHHHHH-
Confidence 34556677789999999999999999999999999999985322 68999999999966542211110
Q ss_pred CCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCC
Q 013008 213 KEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGL 292 (451)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~ 292 (451)
+. .++...-..|++++++++++ ++++|++|.+.++.|.... +++|+++|+++|+++|+||++...
T Consensus 114 ---------~~-~~~~~~~~~d~~~l~~~i~~-~TklV~lesP~NPtg~~~d----i~~I~~la~~~gi~vvvD~t~~~~ 178 (364)
T PRK07269 114 ---------KE-GRFHFTYANTEEELIAAIEE-DTDIVYIETPTNPLMVEFD----IEKVAKLAHAKGAKVIVDNTFYSP 178 (364)
T ss_pred ---------hc-CcEEEEecCCHHHHHHhcCc-CceEEEEECCCCCCCeeeC----HHHHHHHHHHcCCEEEEECCCccc
Confidence 00 01111112389999999975 5678888877777776665 999999999999999999996321
Q ss_pred CcccccccccccCCCcceeee--cccccC-C-cccccccc-cHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcC--h
Q 013008 293 GRTGYLWAHEHYGIFPDIMTL--AKPLAG-G-LPIGAALV-TEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISN--P 365 (451)
Q Consensus 293 gr~G~~~~~~~~~~~pdi~t~--sK~lg~-G-~~iG~v~~-~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~--~ 365 (451)
..+ ...+...|++++ +|.++| | .-.|++++ ++++.+.++..........+|+.++.++..|+.+.. +
T Consensus 179 -~~~-----~pl~~gaDivv~S~tK~l~g~~d~~gG~v~~~~~~l~~~~~~~~~~~G~~~s~~~a~l~~~~L~tL~~r~~ 252 (364)
T PRK07269 179 -IYQ-----RPIELGADIVLHSATKYLSGHNDVLAGVVVTNDLELYEKLFYNLNTTGAVLSPFDSYLLMRGLKTLSLRME 252 (364)
T ss_pred -ccC-----CchhhCCcEEEecCceeccCCCcccceEEEeCcHHHHHHHHHHHHHhCCCCCHHHHHHHHcCCCcHHHHHH
Confidence 111 223445777754 599986 4 44577776 467777664221122245688888877776664321 1
Q ss_pred ------HHHHHHHhCCCCccee--cccceeEEEEecC--ChHHHHHHHH--H--------CCceeeecC-----------
Q 013008 366 ------AFLASKLARNPHVKDV--RGLGLIIGIEFDV--SATPVVDACR--D--------SGLLVLTAG----------- 414 (451)
Q Consensus 366 ------~~~~~~~~~~~~~~~v--~g~G~~~~~~~~~--~~~~~~~~l~--~--------~Gv~~~~~~----------- 414 (451)
..+.++++.+|.+..+ ++.|.++.|++.. ...+|.+.+. . +.+++.|..
T Consensus 253 ~~~~na~~~a~~L~~~p~v~~v~ypg~gg~~sf~~~~~~~~~~f~~~l~~~~~~~slG~~~sl~~~p~~~~~~~~~~~~r 332 (364)
T PRK07269 253 RSTANAQEVVAFLKKSPAVKEVLYTGKGGMISFKVADETRIPHILNSLKVFTFAESLGGVESLITYPTTQTHADIPAEVR 332 (364)
T ss_pred HHHHHHHHHHHHHHhCCCccEEeCCCcCcEEEEEECCHHHHHHHHHhCCcceEccCCCCcCeEeeCCcccccccCCHHHH
Confidence 1111156778855433 5788899998842 1223333221 0 133333320
Q ss_pred -----CCCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q 013008 415 -----KGNVVRLVPPLIISEQELDQAVEILCKTLP 444 (451)
Q Consensus 415 -----~~~~iri~~~~~~t~e~i~~~l~~l~~~l~ 444 (451)
..+.+|+++.+ |+.+.+++-|+++|+
T Consensus 333 ~~~Gi~~~liRlsvGl----E~~~dli~dl~~al~ 363 (364)
T PRK07269 333 HSYGLTDDLLRLSIGI----EDARDLIADLKQALE 363 (364)
T ss_pred HhcCCCCCeEEEEecc----CCHHHHHHHHHHHhc
Confidence 12568886554 567777777777764
No 275
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.73 E-value=4.1e-16 Score=157.35 Aligned_cols=166 Identities=20% Similarity=0.161 Sum_probs=124.4
Q ss_pred cCCCCCHHHHHHHHHHhhccCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCC
Q 013008 134 SNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK 213 (451)
Q Consensus 134 ~~~~~~~~~~~l~~~l~~~~~~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~ 213 (451)
+..+.++...+|+++|+++.+.+.+++++||++|+..++..+.. ++++||+.++.|++.........
T Consensus 51 ysr~~~p~~~~le~~lA~l~g~~~~v~~~sG~~Ai~~al~~l~~-----------~Gd~Vl~~~~~y~~t~~~~~~~~-- 117 (418)
T TIGR01326 51 YSRLMNPTTDVLEQRIAALEGGVAALAVASGQAAITYAILNLAQ-----------AGDNIVSSSYLYGGTYNLFKHTL-- 117 (418)
T ss_pred eECCCChhHHHHHHHHHHHhCCCeEEEEccHHHHHHHHHHHHhC-----------CCCEEEEECCCcHHHHHHHHHHH--
Confidence 45566777899999999999988999999999999999986652 58899999999977432211100
Q ss_pred CCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCC
Q 013008 214 EHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLG 293 (451)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~g 293 (451)
......+.+++.+|++++++++.+ ++++|++|.++++.|.+.+ +++|+++|++||+++|+||+|. .+
T Consensus 118 -------~~~G~~v~~v~~~d~~~l~~~l~~-~t~~V~le~p~NPtg~v~d----l~~I~~la~~~~i~livD~t~~-~~ 184 (418)
T TIGR01326 118 -------KRLGIEVRFVDPDDPEEFEKAIDE-NTKAVFAETIGNPAINVPD----IEAIAEVAHAHGVPLIVDNTFA-TP 184 (418)
T ss_pred -------HHcCcEEEEECCCCHHHHHHhcCc-CCeEEEEECCCCCCCeecC----HHHHHHHHHHcCCEEEEECCCc-hh
Confidence 011123455666799999999965 5778888988777777666 9999999999999999999985 22
Q ss_pred cccccccccccCCCccee--eecccccC-CcccccccccH
Q 013008 294 RTGYLWAHEHYGIFPDIM--TLAKPLAG-GLPIGAALVTE 330 (451)
Q Consensus 294 r~G~~~~~~~~~~~pdi~--t~sK~lg~-G~~iG~v~~~~ 330 (451)
.. .......+|++ +++|.+++ |+++|++++++
T Consensus 185 ~~-----~~~l~~g~Divv~S~sK~l~g~G~~lGg~v~~~ 219 (418)
T TIGR01326 185 YL-----CRPIDHGADIVVHSATKYIGGHGTAIGGVIVDG 219 (418)
T ss_pred hc-----CCchhcCCeEEEECccccccCCccceEEEEEec
Confidence 11 11222346766 67899997 89999988754
No 276
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=99.72 E-value=1.2e-15 Score=144.56 Aligned_cols=258 Identities=21% Similarity=0.201 Sum_probs=169.2
Q ss_pred CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeC--
Q 013008 155 ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEY-- 232 (451)
Q Consensus 155 ~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 232 (451)
+++++++++++.|++...-++. +|++..+++.|-|.|+....---+ ++..+|.
T Consensus 146 P~~~Vv~~G~T~ane~l~fcLa-----------dpgdafLvPtPyY~gfdrdl~~rT--------------gveivpv~c 200 (471)
T KOG0256|consen 146 PERVVVTNGATSANETLMFCLA-----------DPGDAFLVPTPYYPGFDRDLRWRT--------------GVEIVPVHC 200 (471)
T ss_pred ccceEEecccchhhHHHHHHhc-----------CCCceeeecCCCCCcccccceecc--------------CceEEEEEe
Confidence 7899999999999999888766 489999999999999854322222 2222221
Q ss_pred ---C----CHHHHHHhcC-----CCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccC--CCccccc
Q 013008 233 ---G----NIEATRKLIQ-----PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCG--LGRTGYL 298 (451)
Q Consensus 233 ---~----d~~~le~~l~-----~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg--~gr~G~~ 298 (451)
| +.++||.++. ..+++.||+...+++-|+ ..+++.|..+...|.++++-+|+||||++ |+..+-.
T Consensus 201 ~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~-~~~~e~L~~ll~Fa~~kniHvI~DEIya~sVF~~~~F~ 279 (471)
T KOG0256|consen 201 SSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGT-TLSPEELISLLNFASRKNIHVISDEIYAGSVFDKSEFR 279 (471)
T ss_pred ecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCC-ccCHHHHHHHHHHHhhcceEEEeehhhcccccCccCce
Confidence 1 5788887775 345666555444444444 46899999999999999999999999987 4333211
Q ss_pred cccccc---CCCcce----eeeccccc-CCcccccccc-cHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHHH
Q 013008 299 WAHEHY---GIFPDI----MTLAKPLA-GGLPIGAALV-TEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLA 369 (451)
Q Consensus 299 ~~~~~~---~~~pdi----~t~sK~lg-~G~~iG~v~~-~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~ 369 (451)
...+.. ...||. -++||=+| .|+|+|.|.. ++++........ +-...++..|.-....|. ++.+.+
T Consensus 280 Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGviYS~ne~VvsaA~kms--sf~~vSs~tQ~~la~LLS---D~~f~~ 354 (471)
T KOG0256|consen 280 SVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVIYSNNEDVVSAATKMS--SFGLVSSQTQYLLASLLS---DEEFTR 354 (471)
T ss_pred EHHHHhhccccCCCcEEEEEEeccccCCCceEEEEEEecChHHHHHHHHHh--hccCCcHHHHHHHHHHhc---hHHHHH
Confidence 111111 124553 37899999 6999999876 567776654322 112245666665554443 333332
Q ss_pred H--------HH------------hCCCCcceecccceeEEEEec--------CChHHHHHHHHHC-CceeeecC-----C
Q 013008 370 S--------KL------------ARNPHVKDVRGLGLIIGIEFD--------VSATPVVDACRDS-GLLVLTAG-----K 415 (451)
Q Consensus 370 ~--------~~------------~~~~~~~~v~g~G~~~~~~~~--------~~~~~~~~~l~~~-Gv~~~~~~-----~ 415 (451)
. +. ..+|++ -.+.|+++|+++. .....+.++++++ ++.+.|+. .
T Consensus 355 ~yl~en~~Rl~~rh~~~~~gLk~lgI~cl--~s~AGlF~wvDlr~lL~s~tfe~El~Lw~~i~~~vklnlSpG~s~~C~E 432 (471)
T KOG0256|consen 355 EYLRENNKRLRIRHRYIVEGLKALGIPCL--KSNAGLFCWVDLRKLLTSLTFEGELELWERILDNVKLNLSPGSSCHCHE 432 (471)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHhcCCcee--ecCCeeEEEEEhHHhcCcCChHHHHHHHHHHHHhhccccCCCCcceecC
Confidence 2 11 123333 3577999999983 1234577788877 99999874 2
Q ss_pred CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 013008 416 GNVVRLVPPLIISEQELDQAVEILCKTLPVL 446 (451)
Q Consensus 416 ~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~ 446 (451)
++++|++.. +..++.++-+++||...+...
T Consensus 433 pGWFRvcFA-n~~~~t~~~am~Ri~~~~~~~ 462 (471)
T KOG0256|consen 433 PGWFRVCFA-NMSEETLEVAMRRLKQFLDSQ 462 (471)
T ss_pred CCeEEEEec-cCCHHHHHHHHHHHHHHHHhh
Confidence 578888643 445565666999999988743
No 277
>PRK14012 cysteine desulfurase; Provisional
Probab=99.72 E-value=3.4e-15 Score=150.64 Aligned_cols=316 Identities=16% Similarity=0.157 Sum_probs=182.6
Q ss_pred CEEEeeccCcccccCCCCCHHHHHHHHHHHh--h-cccccCCCC------CHHHHHHHHHHhhccC--CCeEEecCCHHH
Q 013008 98 REYLDLSSGIAVNALGHGDADWIKAVVDQAN--V-LTHVSNMYY------SIPQIELAKRLVACSF--ADRVFFSNTGTE 166 (451)
Q Consensus 98 ~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~--~-~~~~~~~~~------~~~~~~l~~~l~~~~~--~e~v~~~~sG~e 166 (451)
+-|+|..+. +..++.+.+++.+.+. . ......... .....+++++++++++ .+.+++++||++
T Consensus 4 ~iyld~a~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~g~~~~~v~~~~g~t~ 77 (404)
T PRK14012 4 PIYLDYSAT------TPVDPRVAEKMMPYLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLIGADPREIVFTSGATE 77 (404)
T ss_pred eEEecCcCC------CCCCHHHHHHHHHHHHhcccCcCCCchhhHHHHHHHHHHHHHHHHHHHHcCcCcCeEEEeCCHHH
Confidence 357776553 4578899999988775 2 211111000 1225567788888887 467999999999
Q ss_pred HHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhc--cCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCC
Q 013008 167 ANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALAL--TSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQP 244 (451)
Q Consensus 167 A~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~ 244 (451)
|+..+++++..+.. .+++.||+.+..|+........+ .+... .+.+..++.. -|+++|++++.+
T Consensus 78 al~~~l~~l~~~~~-------~~gd~Vi~~~~~~~s~~~~~~~~~~~g~~~---~~v~~~~~g~----~d~~~l~~~i~~ 143 (404)
T PRK14012 78 SDNLAIKGAAHFYQ-------KKGKHIITSKTEHKAVLDTCRQLEREGFEV---TYLDPQSNGI----IDLEKLEAAMRD 143 (404)
T ss_pred HHHHHHHHHHHhhc-------CCCCEEEEecCccHHHHHHHHHHHhCCCEE---EEEccCCCCc----CCHHHHHHhcCC
Confidence 99999987643211 14788888877765433222111 11110 0011111100 289999999975
Q ss_pred CCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccccccCCCcceeeec--ccccCCcc
Q 013008 245 GKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLA--KPLAGGLP 322 (451)
Q Consensus 245 ~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~t~s--K~lg~G~~ 322 (451)
++++|++..+++++|.+.+ +++|.++|++||+++|+|++|+ +|... .+.....+|++++| |.+|++ +
T Consensus 144 -~t~lv~~~~~~n~tG~~~~----~~~I~~la~~~g~~vivD~a~~-~g~~~----~~~~~~~~D~~~~s~~K~~gp~-g 212 (404)
T PRK14012 144 -DTILVSIMHVNNEIGVIQD----IAAIGEICRERGIIFHVDAAQS-VGKVP----IDLSKLKVDLMSFSAHKIYGPK-G 212 (404)
T ss_pred -CCEEEEEECcCCCccchhh----HHHHHHHHHHcCCEEEEEcchh-cCCcc----cCcccCCCCEEEEehhhccCCC-c
Confidence 5678888888888888776 8999999999999999999996 43221 11112458888777 977543 6
Q ss_pred cccccccHHHHhhccCCCccC------CC-CCcHHHHHHHHHHHHHhcC--hHHHHH----------HHhCCCCccee--
Q 013008 323 IGAALVTEKVASAINYGDHGS------TF-AGSPLVCNAAIAVLDKISN--PAFLAS----------KLARNPHVKDV-- 381 (451)
Q Consensus 323 iG~v~~~~~i~~~~~~~~~~~------t~-~~~~~~~aaa~aal~~~~~--~~~~~~----------~~~~~~~~~~v-- 381 (451)
+|+++++++....+.+...+. .. +.+.....+..++++.+.. +...++ .++.++.+...
T Consensus 213 ~G~l~~~~~~~~~~~~~~~g~~~~~~~~~gt~~~~~~~~l~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~i~~~~~ 292 (404)
T PRK14012 213 IGALYVRRKPRVRLEAQMHGGGHERGMRSGTLPTHQIVGMGEAARIAKEEMATENERIRALRDRLWNGIKDIEEVYLNGD 292 (404)
T ss_pred eEEEEEecCCCCCCCceecCCCccCCccCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCC
Confidence 788877765433333211111 01 1233333333345543321 111111 22334433211
Q ss_pred ---cccc-eeEEEEecCChHHHHHHHHHCCceeeec------C----------------CCCEEEEeCCCCCCHHHHHHH
Q 013008 382 ---RGLG-LIIGIEFDVSATPVVDACRDSGLLVLTA------G----------------KGNVVRLVPPLIISEQELDQA 435 (451)
Q Consensus 382 ---~g~G-~~~~~~~~~~~~~~~~~l~~~Gv~~~~~------~----------------~~~~iri~~~~~~t~e~i~~~ 435 (451)
+..+ ..+++.+ ....++...|. ++.+..+ . ..+.+|+++....|++|+|++
T Consensus 293 ~~~~~~~~~~~~~~~-~~~~~~~~~l~--~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~~dvd~~ 369 (404)
T PRK14012 293 LEQRVPGNLNVSFNY-VEGESLIMALK--DLAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYA 369 (404)
T ss_pred ccccCCCEEEEEEeC-cCHHHHHHhCC--CeEEEchhhhCCCCCCCCHHHHHcCCChhhcCceEEEEecCCCCHHHHHHH
Confidence 1111 1233332 23345655553 3332211 0 125789999999999999999
Q ss_pred HHHHHHHHHHHh
Q 013008 436 VEILCKTLPVLD 447 (451)
Q Consensus 436 l~~l~~~l~~~~ 447 (451)
++.|+++++.++
T Consensus 370 ~~~l~~~~~~~~ 381 (404)
T PRK14012 370 IELVRKSIGKLR 381 (404)
T ss_pred HHHHHHHHHHHH
Confidence 999999988764
No 278
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.72 E-value=5.4e-16 Score=155.10 Aligned_cols=194 Identities=16% Similarity=0.122 Sum_probs=131.7
Q ss_pred cccCCCCCHHHHHHHHHHhhccCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhcc
Q 013008 132 HVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALT 211 (451)
Q Consensus 132 ~~~~~~~~~~~~~l~~~l~~~~~~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~ 211 (451)
+.+..+.++...+|+++++++.+.+.+++++||++|+..++..+. .++|+||+.++.|.+.........
T Consensus 57 ~~Y~r~~~pt~~~Le~~lA~l~g~~~~l~~~sgt~Ai~~~l~al~-----------~~GD~Vl~~~~~y~~~~~~~~~~~ 125 (394)
T PRK07050 57 WRYGLHATPTSLALAQRLAEIEGGRHALLQPSGLAAISLVYFGLV-----------KAGDDVLIPDNAYGPNRDHGEWLA 125 (394)
T ss_pred cccCCCCCHHHHHHHHHHHHHhCCCeEEEeccHHHHHHHHHHHHh-----------CCCCEEEEecCCcccHHHHHHHHH
Confidence 345667777789999999999999999999999999999998664 168999999999976542110100
Q ss_pred CCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccC
Q 013008 212 SKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCG 291 (451)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg 291 (451)
......+.+++..+.+++++++++ ++++|++|.+.++.|. ...+++|.++|++||+++|+|++|..
T Consensus 126 ---------~~~Gi~v~~vd~~~~~~l~~~i~~-~tklV~le~p~Np~~~----~~di~~I~~ia~~~gi~livD~a~a~ 191 (394)
T PRK07050 126 ---------RDFGITVRFYDPLIGAGIADLIQP-NTRLIWLEAPGSVTME----VPDVPAITAAARARGVVTAIDNTYSA 191 (394)
T ss_pred ---------HhcCeEEEEECCCCHHHHHHhcCC-CCeEEEEECCCCCCcc----HhhHHHHHHHHHHcCCEEEEECCccc
Confidence 001122344544466889998865 5678888876665543 44499999999999999999999852
Q ss_pred CCcccccccccccCCCccee--eecccccCC--cccccccc-cHHHHhhccCCCccCCCCCcHHHHHHHH
Q 013008 292 LGRTGYLWAHEHYGIFPDIM--TLAKPLAGG--LPIGAALV-TEKVASAINYGDHGSTFAGSPLVCNAAI 356 (451)
Q Consensus 292 ~gr~G~~~~~~~~~~~pdi~--t~sK~lg~G--~~iG~v~~-~~~i~~~~~~~~~~~t~~~~~~~~aaa~ 356 (451)
+..-. ....| .|++ +++|.++|| .+.|++++ ++++++.++........+.+|+.+..++
T Consensus 192 -~~~~~---~l~~G--aDi~v~S~tK~~~g~~~~~gG~v~~~~~~~~~~~~~~~~~~G~~~~~~~a~l~l 255 (394)
T PRK07050 192 -GLAFK---PFEHG--VDISVQALTKYQSGGSDVLMGATITADAELHAKLKLARMRLGIGVSADDCSLVL 255 (394)
T ss_pred -ccccC---HHHcC--CeEEEEECCceecCCCCeeEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHH
Confidence 11111 11123 4655 678999863 67887776 6778777653322223345566554443
No 279
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.72 E-value=5e-16 Score=154.85 Aligned_cols=197 Identities=16% Similarity=0.075 Sum_probs=134.9
Q ss_pred cCCCCCHHHHHHHHHHhhccCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCC
Q 013008 134 SNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK 213 (451)
Q Consensus 134 ~~~~~~~~~~~l~~~l~~~~~~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~ 213 (451)
+..+.++...+|+++++++++.+.+++++||++|+..++..+.. ++|.||+..+.|++.......+.
T Consensus 47 y~r~~np~~~~lE~~lA~l~g~~~~l~~~sG~~Ai~~~l~~ll~-----------~GD~Vlv~~~~y~~~~~~~~~~~-- 113 (385)
T PRK08574 47 YSREENPTLRPLEEALAKLEGGVDALAFNSGMAAISTLFFSLLK-----------AGDRVVLPMEAYGTTLRLLKSLE-- 113 (385)
T ss_pred EECCCCccHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHHhC-----------CCCEEEEcCCCchhHHHHHHHhh--
Confidence 44556667889999999999988889999999999999986641 68999999999976543221110
Q ss_pred CCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCC
Q 013008 214 EHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLG 293 (451)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~g 293 (451)
.....+.+++ .|++++++++++.++++|++|.++++.|.+.+ +++|.++|++||+++|+||+|+ .+
T Consensus 114 --------~~g~~v~~~~-~d~~~l~~~i~~~~tklV~ie~p~NPtG~v~d----l~~I~~la~~~gi~livD~t~a-~~ 179 (385)
T PRK08574 114 --------KFGVKVVLAY-PSTEDIIEAIKEGRTKLVFIETMTNPTLKVID----VPEVAKAAKELGAILVVDNTFA-TP 179 (385)
T ss_pred --------ccCcEEEEEC-CCHHHHHHhcCccCceEEEEECCCCCCCEecC----HHHHHHHHHHcCCEEEEECCCC-cc
Confidence 0011122222 37899999997546888889988888887776 8999999999999999999984 21
Q ss_pred cccccccccccCCCccee--eecccccC-C-ccccccc-ccHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHh
Q 013008 294 RTGYLWAHEHYGIFPDIM--TLAKPLAG-G-LPIGAAL-VTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKI 362 (451)
Q Consensus 294 r~G~~~~~~~~~~~pdi~--t~sK~lg~-G-~~iG~v~-~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~ 362 (451)
...... ..| .|++ +++|.++| | .-.|+++ .++++.+.++..........+|+.++.++..|+.+
T Consensus 180 ~~~~~l---~~G--aDivv~S~sK~l~g~~d~~gG~vi~~~~~~~~~~~~~~~~~g~~~~p~~a~l~l~~l~tL 248 (385)
T PRK08574 180 LLYRPL---RHG--ADFVVHSLTKYIAGHNDVVGGVAVAWSGEFLEELWEWRRRLGTIMQPFEAYLVLRGLKTL 248 (385)
T ss_pred ccCChh---hhC--CcEEEeeCceeecCCCCceeEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHHcccCcH
Confidence 111111 234 4555 67899986 5 3346454 46777776643222233445677777766666543
No 280
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.72 E-value=1.2e-15 Score=153.27 Aligned_cols=198 Identities=17% Similarity=0.148 Sum_probs=140.6
Q ss_pred cCCCCCHHHHHHHHHHhhccCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCC
Q 013008 134 SNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK 213 (451)
Q Consensus 134 ~~~~~~~~~~~l~~~l~~~~~~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~ 213 (451)
++.+..+...+|+++++++.+.+..+.++||+.|+..+++... .++|+||+..+.|.+ +.......
T Consensus 59 y~r~~~p~~~~le~~lA~l~g~~~~i~~~sG~~Al~~~l~~ll-----------~~Gd~Viv~~~~y~~-t~~~~~~~-- 124 (403)
T PRK07503 59 YSRISNPTLALLEQRMASLEGGEAAVALASGMGAITATLWTLL-----------RPGDEVIVDQTLYGC-TFAFLHHG-- 124 (403)
T ss_pred eeCCCCchHHHHHHHHHHHhCCCcEEEEcCHHHHHHHHHHHHc-----------CCCCEEEEccCccch-HHHHHHHH--
Confidence 4555666788999999999987778888999999999988553 168999999888733 32211100
Q ss_pred CCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCC
Q 013008 214 EHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLG 293 (451)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~g 293 (451)
.......+.+++.+|++++++++.+ ++++|++|.++++.|.+.+ +++|.++|++||+++|+|++|...
T Consensus 125 ------~~~~G~~v~~vd~~d~~~l~~~i~~-~tklV~le~p~NPtG~~~d----i~~I~~la~~~gi~lIvD~a~a~~- 192 (403)
T PRK07503 125 ------LGEFGVTVRHVDLTDPAALKAAISD-KTRMVYFETPANPNMRLVD----IAAVAEIAHGAGAKVVVDNTYCTP- 192 (403)
T ss_pred ------HhhCCEEEEEeCCCCHHHHHHhcCc-cCcEEEEeCCCCCCCeeeC----HHHHHHHHHHcCCEEEEECCCccc-
Confidence 0011233456666789999999975 5778888877777787666 999999999999999999999632
Q ss_pred cccccccccccCCCccee--eecccccC-C-cccccccccHHHHhhccCC--CccCCCCCcHHHHHHHHHHHHHh
Q 013008 294 RTGYLWAHEHYGIFPDIM--TLAKPLAG-G-LPIGAALVTEKVASAINYG--DHGSTFAGSPLVCNAAIAVLDKI 362 (451)
Q Consensus 294 r~G~~~~~~~~~~~pdi~--t~sK~lg~-G-~~iG~v~~~~~i~~~~~~~--~~~~t~~~~~~~~aaa~aal~~~ 362 (451)
..+... +...|++ +++|.+++ | .+.|+++.++++++.++.. ........+|+.++.++..|+.+
T Consensus 193 ~~~~~l-----~~g~Di~v~S~tK~l~g~gd~~gG~v~~~~~l~~~l~~~~~~~~~g~~~s~~~a~l~l~~L~tl 262 (403)
T PRK07503 193 YLQRPL-----ELGADLVVHSATKYLGGHGDITAGLVVGGKALADRIRLEGLKDMTGAVMSPFDAFLLMRGLKTL 262 (403)
T ss_pred ccCCch-----hhCCCEEEccccccccCCCceeEEEEEcCHHHHHHHHhhhHHhCcCCCCCHHHHHHHHcCcchH
Confidence 222221 2345655 57899986 5 7889999888888877522 22223556788887777766644
No 281
>PLN02651 cysteine desulfurase
Probab=99.72 E-value=7.8e-16 Score=153.11 Aligned_cols=291 Identities=16% Similarity=0.142 Sum_probs=178.3
Q ss_pred CCCCHHHHHHHHHHHhhc-ccccC-CC-----CCHHHHHHHHHHhhccC--CCeEEecCCHHHHHHHHHHHHHHHhhhcC
Q 013008 113 GHGDADWIKAVVDQANVL-THVSN-MY-----YSIPQIELAKRLVACSF--ADRVFFSNTGTEANEAAIKFARKFQRHSN 183 (451)
Q Consensus 113 G~~~p~v~~a~~~~~~~~-~~~~~-~~-----~~~~~~~l~~~l~~~~~--~e~v~~~~sG~eA~~~al~~a~~~~~~~~ 183 (451)
+..++.+.+++.+.+... ..... .. ......++.++++++++ .+.++|++|+++|+..++..+.....
T Consensus 9 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~t~~~t~a~~~~l~~~~~~~~--- 85 (364)
T PLN02651 9 TPIDPRVLDAMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALIGADPKEIIFTSGATESNNLAIKGVMHFYK--- 85 (364)
T ss_pred CCCCHHHHHHHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhcc---
Confidence 446789999998877542 11111 01 11225677788888887 56899999999999999987653211
Q ss_pred CCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeC-----CCHHHHHHhcCCCCeEEEEEccccCC
Q 013008 184 PDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEY-----GNIEATRKLIQPGKTAAVFVEPIQGE 258 (451)
Q Consensus 184 ~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~le~~l~~~~~aavi~ep~~~~ 258 (451)
.++++||+.+..|+........+. ... ..+..++. -|++++++++++ ++++|++..+++.
T Consensus 86 ----~~g~~vl~~~~~h~s~~~~~~~~~-~~g---------~~v~~v~~~~~~~~d~~~l~~~i~~-~t~lv~v~~~~n~ 150 (364)
T PLN02651 86 ----DKKKHVITTQTEHKCVLDSCRHLQ-QEG---------FEVTYLPVKSDGLVDLDELAAAIRP-DTALVSVMAVNNE 150 (364)
T ss_pred ----CCCCEEEEcccccHHHHHHHHHHH-hcC---------CEEEEEccCCCCcCCHHHHHHhcCC-CcEEEEEECCCCC
Confidence 146778886655543322111111 000 11112221 278999999975 5778888888888
Q ss_pred CCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccccccCCCcceeeec--ccccCCcccccccccHHHHhhc
Q 013008 259 GGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLA--KPLAGGLPIGAALVTEKVASAI 336 (451)
Q Consensus 259 ~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~t~s--K~lg~G~~iG~v~~~~~i~~~~ 336 (451)
+|.+.+ +++|.++|++||+++++|.+|+ +|.. . ++...+.+|++++| | ++|...+|++.++++..+.+
T Consensus 151 tG~~~~----l~~I~~~~~~~g~~~~vD~a~~-~g~~--~--~~~~~~~~D~~~~s~hK-~~gp~G~g~l~v~~~~~~~l 220 (364)
T PLN02651 151 IGVIQP----VEEIGELCREKKVLFHTDAAQA-VGKI--P--VDVDDLGVDLMSISGHK-IYGPKGVGALYVRRRPRVRL 220 (364)
T ss_pred ceeccc----HHHHHHHHHHcCCEEEEEcchh-hCCc--c--cCcccCCCCEEEechhh-hCCCCceEEEEEcCCCCCCC
Confidence 888877 9999999999999999999996 4321 1 22223457888775 8 54335688988888766665
Q ss_pred cCCCcc-------CCCCCcHHHHHHHHHHHHHhcCh--HHHHH-----------HHhCCCCcceecc------cceeEEE
Q 013008 337 NYGDHG-------STFAGSPLVCNAAIAVLDKISNP--AFLAS-----------KLARNPHVKDVRG------LGLIIGI 390 (451)
Q Consensus 337 ~~~~~~-------~t~~~~~~~~aaa~aal~~~~~~--~~~~~-----------~~~~~~~~~~v~g------~G~~~~~ 390 (451)
.+...+ ...+.|..++.+..++|+.+.+. ...++ +.+..+.+.-+.. ...++.|
T Consensus 221 ~p~~~g~~~~~~~~~GT~~~~~~~~l~~al~~~~~~~~~i~~~~~~l~~~l~~~l~~~~~~~~i~~~~~~~~~~~~i~~~ 300 (364)
T PLN02651 221 EPLMSGGGQERGRRSGTENTPLVVGLGAACELAMKEMDYDEKHMKALRERLLNGLRAKLGGVRVNGPRDPEKRYPGTLNL 300 (364)
T ss_pred CccccCCCccCCccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCCCcccCcCCEEEE
Confidence 443211 11224556677777788776431 11111 1122333322211 1235555
Q ss_pred Eec-CChHHHHHHHHHCCceeeecC----------------------CCCEEEEeCCCCCCHHHHH
Q 013008 391 EFD-VSATPVVDACRDSGLLVLTAG----------------------KGNVVRLVPPLIISEQELD 433 (451)
Q Consensus 391 ~~~-~~~~~~~~~l~~~Gv~~~~~~----------------------~~~~iri~~~~~~t~e~i~ 433 (451)
.+. .+..++.+.|.+ |.+..+. ..+.+|+++....|+||||
T Consensus 301 ~~~~~~~~~~~~~L~~--i~v~~g~~c~~~~~~~~~~~~~~g~~~~~~~~~vR~S~~~~~t~~did 364 (364)
T PLN02651 301 SFAYVEGESLLMGLKE--VAVSSGSACTSASLEPSYVLRALGVPEEMAHGSLRLGVGRFTTEEEVD 364 (364)
T ss_pred EeCCCCHHHHHHHhCC--EEEEchhhcCCCCCCcCHHHHHcCCChHHhCceEEEEcCCCCCHHHcC
Confidence 553 456778877754 5554321 0257999999999999985
No 282
>PRK05968 hypothetical protein; Provisional
Probab=99.71 E-value=5.2e-16 Score=155.12 Aligned_cols=276 Identities=17% Similarity=0.086 Sum_probs=174.4
Q ss_pred cCCCCCHHHHHHHHHHhhccCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCC
Q 013008 134 SNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK 213 (451)
Q Consensus 134 ~~~~~~~~~~~l~~~l~~~~~~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~ 213 (451)
+..+..+...+|+++++++.+.+..++++||+.|+..++.... .++|+||+..+.|++.........
T Consensus 57 Y~r~~~p~~~~le~~lA~l~g~~~av~~~sG~~Ai~~al~al~-----------~~Gd~Vl~~~~~y~~t~~~~~~~~-- 123 (389)
T PRK05968 57 YSRGDNPTVRAFEEMLAKLEGAEDARGFASGMAAISSTVLSFV-----------EPGDRIVAVRHVYPDAFRLFETIL-- 123 (389)
T ss_pred ccCCCChhHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHh-----------CCCCEEEEeCCCchHHHHHHHHHH--
Confidence 4555666688999999999997777888999999999887543 168999999999876432111100
Q ss_pred CCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCC
Q 013008 214 EHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLG 293 (451)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~g 293 (451)
......+.+++.+|++++++.+. ++++|++|.+.+..+ +...+++|.++|++||+++|+|++|...
T Consensus 124 -------~~~G~~v~~vd~~d~~~l~~~i~--~tklV~ie~pt~~~~----~~~dl~~i~~la~~~gi~vivD~a~a~~- 189 (389)
T PRK05968 124 -------KRMGVEVDYVDGRDEEAVAKALP--GAKLLYLESPTSWVF----ELQDVAALAALAKRHGVVTMIDNSWASP- 189 (389)
T ss_pred -------HHcCceEEEeCCCCHHHHHHhcc--cCCEEEEECCCCCCC----cHHHHHHHHHHHHHcCCEEEEECCCcch-
Confidence 01112344566668999999883 467788886555443 4455999999999999999999998532
Q ss_pred cccccccccccCCCccee--eecccccC-C-cccccccccHHHHhhccCCCc-cCCCCCcHHHHHHHHHHHHHhcChHHH
Q 013008 294 RTGYLWAHEHYGIFPDIM--TLAKPLAG-G-LPIGAALVTEKVASAINYGDH-GSTFAGSPLVCNAAIAVLDKISNPAFL 368 (451)
Q Consensus 294 r~G~~~~~~~~~~~pdi~--t~sK~lg~-G-~~iG~v~~~~~i~~~~~~~~~-~~t~~~~~~~~aaa~aal~~~~~~~~~ 368 (451)
..... . ..| .|++ +++|.+++ | ...|++++++++++.++.... ......+|+.++.++..|+.+. ..+.
T Consensus 190 ~~~~p--~-~~g--~Divv~S~tK~l~g~~~~~gG~i~~~~~~~~~l~~~~~~~~g~~~~~~~A~~~l~~L~tl~-~r~~ 263 (389)
T PRK05968 190 VFQRP--I-TLG--VDLVIHSASKYLGGHSDTVAGVVAGSKEHIARINAEAYPYLGAKLSPFEAWLLLRGLRTLP-LRMK 263 (389)
T ss_pred hccCc--h-hcC--CcEEEeeccccccCCCCeEEEEEEECHHHHHHHHHHHHHhCCCCCChHHHHHHHcccCcHH-HHHH
Confidence 11111 1 123 3555 56799986 4 667888888888877653211 1113456777777766665441 1111
Q ss_pred HH---------HHhCCCCcceec-------------ccceeEEEEec--CChHHHHHHHHHCCceee---------ec--
Q 013008 369 AS---------KLARNPHVKDVR-------------GLGLIIGIEFD--VSATPVVDACRDSGLLVL---------TA-- 413 (451)
Q Consensus 369 ~~---------~~~~~~~~~~v~-------------g~G~~~~~~~~--~~~~~~~~~l~~~Gv~~~---------~~-- 413 (451)
++ .++.+|.+..+. +.|.++.|+++ ....+|++.|...++.+. |.
T Consensus 264 ~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~g~g~~~sf~~~~~~~~~~f~~~L~~~~~~~s~G~~~slv~p~~~ 343 (389)
T PRK05968 264 AHEASALEIARRLKAHPVVERVCHPALANHPPAGLSGTSGLFSFIFREGIDVRAFADALKLFRLGVSWGGHESLVVPAEV 343 (389)
T ss_pred HHHHHHHHHHHHHHhCCCccEEECCCCCCChHHhCCCCceEEEEEECCHHHHHHHHHhCCccEEecCCCCCCceeeeCcc
Confidence 11 456677554443 44668888885 234556666644332211 21
Q ss_pred --------------C-CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 013008 414 --------------G-KGNVVRLVPPLIISEQELDQAVEILCKTLPVL 446 (451)
Q Consensus 414 --------------~-~~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~ 446 (451)
| ..+.+|+++.+- +.+.+++-|+++|++.
T Consensus 344 ~~~~~~~~~~~~~~gi~~~liR~SvGlE----~~~dl~~dl~~al~~~ 387 (389)
T PRK05968 344 VLQQKAQPNSAARFGVSPRSVRLHVGLE----GTEALWADLEQALAAA 387 (389)
T ss_pred cccccCCHHHHHhcCCCCCeEEEEeccC----CHHHHHHHHHHHHHHh
Confidence 0 025688876664 5556666777766654
No 283
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.71 E-value=1e-15 Score=154.24 Aligned_cols=164 Identities=23% Similarity=0.240 Sum_probs=120.7
Q ss_pred cCCCCCHHHHHHHHHHhhccCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCC
Q 013008 134 SNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK 213 (451)
Q Consensus 134 ~~~~~~~~~~~l~~~l~~~~~~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~ 213 (451)
+....++...+|+++|+++.+.+..++++||++|+..+++.+.. ++++||+.++.|++........
T Consensus 52 y~r~~~pt~~~Le~~lA~l~g~~~~l~~ssG~~Ai~~al~al~~-----------~Gd~Vl~~~~~Y~~t~~~~~~~--- 117 (425)
T PRK06084 52 YTRIMNPTNDVLEQRVAALEGGVGALAVASGMAAITYAIQTIAE-----------AGDNIVSVAKLYGGTYNLLAHT--- 117 (425)
T ss_pred ccCCCCchHHHHHHHHHHHhCCCceeEehhHHHHHHHHHHHHhC-----------CCCEEEEeCCCcchHHHHHHHh---
Confidence 44556666889999999999988888999999999999987652 6889999999998644222111
Q ss_pred CCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCC
Q 013008 214 EHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLG 293 (451)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~g 293 (451)
.......+.+++.+|++++++++++ ++++|++|+++++.|.+.+ +++|.++|++||+++|+||++. .+
T Consensus 118 ------l~~~gi~v~~~d~~d~e~le~ai~~-~tklV~lesp~NPtG~v~d----l~~I~~la~~~~i~vVvD~a~a-~~ 185 (425)
T PRK06084 118 ------LPRIGIETRFAAHDDIAALEALIDE-RTKAVFCESIGNPAGNIID----IQALADAAHRHGVPLIVDNTVA-TP 185 (425)
T ss_pred ------cccceeEEEEECCCCHHHHHHHhcc-CCcEEEEeCCCCCCCeecC----HHHHHHHHHHcCCEEEEECCCc-cc
Confidence 0011123455666799999999975 5788888988888887776 8999999999999999999995 22
Q ss_pred cccccccccccCCCccee--eecccccC-Ccccccccc
Q 013008 294 RTGYLWAHEHYGIFPDIM--TLAKPLAG-GLPIGAALV 328 (451)
Q Consensus 294 r~G~~~~~~~~~~~pdi~--t~sK~lg~-G~~iG~v~~ 328 (451)
... .......|++ +++|.++| |.++|.+++
T Consensus 186 ~~~-----~p~~~gaDivv~S~tK~l~G~g~~~gG~v~ 218 (425)
T PRK06084 186 VLC-----RPFEHGADIVVHSLTKYIGGHGTSIGGIVV 218 (425)
T ss_pred ccC-----ChhhcCCCEEEECchhcccccccceeEEEE
Confidence 221 1123346666 67799986 666666554
No 284
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.71 E-value=1.7e-15 Score=150.34 Aligned_cols=270 Identities=20% Similarity=0.173 Sum_probs=166.3
Q ss_pred cCCCCCHHHHHHHHHHhhccCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCC
Q 013008 134 SNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK 213 (451)
Q Consensus 134 ~~~~~~~~~~~l~~~l~~~~~~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~ 213 (451)
+..++++...+|+++++++. .+.+++++||++|+..++.... .++|+||+.+++|++..........
T Consensus 45 y~ry~~p~~~~Le~~lA~l~-~~~~v~~~sG~~Ai~~~l~all-----------~~Gd~Vl~~~~~y~~~~~~~~~~l~- 111 (366)
T PRK07582 45 YGRASNPTWRALEAALGELE-GAEALVFPSGMAAITAVLRALL-----------RPGDTVVVPADGYYQVRALAREYLA- 111 (366)
T ss_pred eECCCCccHHHHHHHHHHHc-CCCEEEECCHHHHHHHHHHHhc-----------CCCCEEEEeCCCcHhHHHHHHHHHh-
Confidence 45566677889999999988 5677778899999999887543 1689999999999876543211000
Q ss_pred CCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEecccc-CC
Q 013008 214 EHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQC-GL 292 (451)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-g~ 292 (451)
.....+.+++.++... ... .++++|++|..++++|.+.+ +++|.++|+++|+++|+||+|. .+
T Consensus 112 --------~~G~~v~~v~~~~~~~--~~~--~~t~lV~le~p~NPtg~v~d----i~~I~~~a~~~g~~lvVD~t~~~~~ 175 (366)
T PRK07582 112 --------PLGVTVREAPTAGMAE--AAL--AGADLVLAETPSNPGLDVCD----LAALAAAAHAAGALLVVDNTTATPL 175 (366)
T ss_pred --------cCeEEEEEECCCChHH--Hhc--cCceEEEEECCCCCCCCccC----HHHHHHHHHHcCCEEEEECCCCCcc
Confidence 0112334455444322 222 35778888877777776665 9999999999999999999984 22
Q ss_pred CcccccccccccCCCccee--eecccccC--Ccccccccc-cHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcC--h
Q 013008 293 GRTGYLWAHEHYGIFPDIM--TLAKPLAG--GLPIGAALV-TEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISN--P 365 (451)
Q Consensus 293 gr~G~~~~~~~~~~~pdi~--t~sK~lg~--G~~iG~v~~-~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~--~ 365 (451)
+. .. ..+..|++ +++|.++| |+++|++++ ++++.+.+...........+|+.+..+...|+.+.. +
T Consensus 176 ~~--~p-----~~~g~Divv~S~sK~l~G~~g~~~G~v~~~~~~l~~~l~~~~~~~g~~~~~~~a~l~~r~l~tl~~R~~ 248 (366)
T PRK07582 176 GQ--RP-----LELGADLVVASDTKALTGHSDLLLGYVAGRDPELMAAVERWRLLAGAIPGPFEAWLAHRSLGTLGLRFA 248 (366)
T ss_pred cc--Cc-----hhcCCcEEEecccccccCCCCeeEEEEEcCcHHHHHHHHHHHHHhCCCCCHHHHHHHHhccccHHHHHH
Confidence 21 11 12235665 57799975 588999987 477777665322222334567777766665553211 1
Q ss_pred HHH------HHHHhCCCCcceec------------------ccceeEEEEecCChHHHHHHHHHCCceeee---------
Q 013008 366 AFL------ASKLARNPHVKDVR------------------GLGLIIGIEFDVSATPVVDACRDSGLLVLT--------- 412 (451)
Q Consensus 366 ~~~------~~~~~~~~~~~~v~------------------g~G~~~~~~~~~~~~~~~~~l~~~Gv~~~~--------- 412 (451)
... .+.++.+|.+..|. +.|.++.|+++ ...+..+.+...+++...
T Consensus 249 ~~~~na~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~~-~~~~~~~~~~~l~~~~~~~s~G~~~sl 327 (366)
T PRK07582 249 RQCANALAVAELLAGHPAVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFELA-DAAAAERFVAASRLVVAATSFGGVHTS 327 (366)
T ss_pred HHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHhhCCCCcceEEEEeC-CHHHHHHHHHhCCcceecccCCCccch
Confidence 111 11445566443332 46888899885 344444444444554320
Q ss_pred ------cC---CCCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q 013008 413 ------AG---KGNVVRLVPPLIISEQELDQAVEILCKTLP 444 (451)
Q Consensus 413 ------~~---~~~~iri~~~~~~t~e~i~~~l~~l~~~l~ 444 (451)
.+ .++.+|+++.+..+++ +++.|+++|+
T Consensus 328 ~~~~~~~~~~~~~~liR~svGlE~~~d----li~dl~~al~ 364 (366)
T PRK07582 328 ADRRARWGDAVPEGFVRLSCGIEDTDD----LVADLERALD 364 (366)
T ss_pred hhhHHHcCCCCCCCeEEEEeccCCHHH----HHHHHHHHHh
Confidence 01 1246899877765544 4555555554
No 285
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.71 E-value=2.5e-15 Score=150.21 Aligned_cols=196 Identities=17% Similarity=0.163 Sum_probs=133.5
Q ss_pred cCCCCCHHHHHHHHHHhhccCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCC
Q 013008 134 SNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK 213 (451)
Q Consensus 134 ~~~~~~~~~~~l~~~l~~~~~~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~ 213 (451)
+..+.++...+|+++++++.+.+..+.++||++|+..+++.+. .++|+||+.++.|.+.........
T Consensus 55 Y~r~~~p~~~~Le~~lA~~~g~~~~i~~~sG~~Ai~~~l~all-----------~~Gd~Vl~~~~~y~~t~~~~~~~~-- 121 (388)
T PRK07811 55 YARTGNPTRTALEEQLAALEGGAYGRAFSSGMAATDCLLRAVL-----------RPGDHIVIPNDAYGGTFRLIDKVF-- 121 (388)
T ss_pred ccCCCCccHHHHHHHHHHHhCCCceEEeCCHHHHHHHHHHHHh-----------CCCCEEEEcCCCchHHHHHHHHhC--
Confidence 3445556688999999999987777788899999999998765 268999999999965432211111
Q ss_pred CCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCC
Q 013008 214 EHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLG 293 (451)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~g 293 (451)
......+.+++..|++++++.+.+ ++++|++|.++++.|...+ +++|.++|++||+++|+||+|...
T Consensus 122 -------~~~gi~~~~~d~~d~e~l~~~i~~-~tklV~ie~p~NPtg~~~d----l~~I~~la~~~gi~lIvD~a~a~~- 188 (388)
T PRK07811 122 -------TRWGVEYTPVDLSDLDAVRAAITP-RTKLIWVETPTNPLLSITD----IAALAELAHDAGAKVVVDNTFASP- 188 (388)
T ss_pred -------cCCCeEEEEeCCCCHHHHHHhcCc-CCeEEEEECCCCCcceecC----HHHHHHHHHHcCCEEEEECCCCcc-
Confidence 011123445566689999999975 5788888877777776655 999999999999999999998532
Q ss_pred cccccccccccCCCccee--eecccccC-C-ccccccccc-HHHHhhccCCCccCCCCCcHHHHHHHHHHHH
Q 013008 294 RTGYLWAHEHYGIFPDIM--TLAKPLAG-G-LPIGAALVT-EKVASAINYGDHGSTFAGSPLVCNAAIAVLD 360 (451)
Q Consensus 294 r~G~~~~~~~~~~~pdi~--t~sK~lg~-G-~~iG~v~~~-~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~ 360 (451)
..+.. .+...|++ +++|.++| | ...|+++++ +++.+.+...........+|+.++.++..|+
T Consensus 189 ~~~~p-----~~~gaDivv~S~sK~l~g~~~~~gG~vv~~~~~l~~~~~~~~~~~g~~~s~~~a~l~~~~L~ 255 (388)
T PRK07811 189 YLQQP-----LALGADVVVHSTTKYIGGHSDVVGGALVTNDEELDEAFAFLQNGAGAVPGPFDAYLTLRGLK 255 (388)
T ss_pred ccCCc-----hhhCCcEEEecCceeecCCCCcEEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHhccC
Confidence 22221 12235655 56799986 4 567888764 6776655432222223345666655555554
No 286
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.70 E-value=6.4e-15 Score=150.58 Aligned_cols=268 Identities=19% Similarity=0.162 Sum_probs=157.1
Q ss_pred HHHHHHHhhccC--CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhc----cCCCCc
Q 013008 143 IELAKRLVACSF--ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALAL----TSKEHY 216 (451)
Q Consensus 143 ~~l~~~l~~~~~--~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~----~~~~~~ 216 (451)
.++.++++++++ .+.+.+++||+++++.++.+.+. . ++++|++.++.|+.. ...+.. .|....
T Consensus 115 ~e~~~~la~l~g~~~~~v~~~~g~t~~~~~~~~a~~~-~---------~g~~Vlv~~~~~~~~-~~~~~~~~~~~G~~~~ 183 (447)
T PRK00451 115 FEYQTMICELTGMDVANASMYDGATALAEAALMAVRI-T---------KRKKVLVSGAVHPEY-REVLKTYLKGQGIEVV 183 (447)
T ss_pred HHHHHHHHHHhCCCcceEEecCcHHHHHHHHHHHHHh-c---------CCCEEEEeCccCHHH-HHHHHHHHHhCCcEEE
Confidence 344466788887 45789999999988887765432 1 478899988765433 333221 111111
Q ss_pred CCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEE--eccccCCCc
Q 013008 217 RSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVF--DEVQCGLGR 294 (451)
Q Consensus 217 ~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~--DEv~tg~gr 294 (451)
. .+..++ . -|+++|++.+.+ ++++|++... ++.|.+.+ +++|.++|+++|+++|+ |.+..|+
T Consensus 184 ~---v~~~~~-~----~d~~~l~~~i~~-~t~~v~l~~p-n~tG~v~~----l~~I~~~a~~~~~~~iv~~d~~~~g~-- 247 (447)
T PRK00451 184 E---VPYEDG-V----TDLEALEAAVDD-DTAAVVVQYP-NFFGVIED----LEEIAEIAHAGGALFIVGVDPVSLGL-- 247 (447)
T ss_pred E---ecCCCC-C----CCHHHHHHhcCC-CeEEEEEECC-CCCCeeCC----HHHHHHHHHHCCCEEEEEcChHHhcc--
Confidence 1 121121 1 289999999975 5677766654 55677665 99999999999999998 5543221
Q ss_pred ccccccccccCCCcceee-----eccccc-CCcccccccccHHHHhhccCC----------------------------C
Q 013008 295 TGYLWAHEHYGIFPDIMT-----LAKPLA-GGLPIGAALVTEKVASAINYG----------------------------D 340 (451)
Q Consensus 295 ~G~~~~~~~~~~~pdi~t-----~sK~lg-~G~~iG~v~~~~~i~~~~~~~----------------------------~ 340 (451)
.. ... ....|+++ +||.+. +|+++|++.+++++++.+.+. .
T Consensus 248 ~~---~~~--~~~~D~~~~s~~k~~~~~~~~Gpg~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (447)
T PRK00451 248 LK---PPG--EYGADIVVGEGQPLGIPLSFGGPYLGFFATRKKLVRQMPGRLVGETVDADGKRGFVLTLQAREQHIRREK 322 (447)
T ss_pred CC---Ccc--cCCCCEEEECCCcCCCCCCCCCCCchHHHhhHHHHhhCCCCEeeeecccCCCeeeEeecccccccccccc
Confidence 11 111 23466664 456654 468899999999888874211 0
Q ss_pred ccCCCCCcHHHH-HHHHHHHHHhcChHHHH---H-------H---HhCCCCcceecccceeEE--EEecCChHHHHHHHH
Q 013008 341 HGSTFAGSPLVC-NAAIAVLDKISNPAFLA---S-------K---LARNPHVKDVRGLGLIIG--IEFDVSATPVVDACR 404 (451)
Q Consensus 341 ~~~t~~~~~~~~-aaa~aal~~~~~~~~~~---~-------~---~~~~~~~~~v~g~G~~~~--~~~~~~~~~~~~~l~ 404 (451)
...+++.+...+ .++.++++.+.++.+.+ + + ++.++.+... ....+.. +.++....+++++|.
T Consensus 323 ~~~~~~~~~~~~~~aaa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~-~~~~~~~~~v~~~~~~~~~~~~L~ 401 (447)
T PRK00451 323 ATSNICTNQALNALAAAIYMSLLGPEGLRELAEQNHQKAHYLAERLAEIGGVELF-DGPFFNEFVVRLPKPAEEVNEALL 401 (447)
T ss_pred ccccccccHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHhhcCCEEec-CCCeEEEEEEecCCCHHHHHHHHH
Confidence 111122222122 23333444333322211 1 2 2333333222 2222222 343335688999999
Q ss_pred HCCceee----ecC--CCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 013008 405 DSGLLVL----TAG--KGNVVRLVPPLIISEQELDQAVEILCKTL 443 (451)
Q Consensus 405 ~~Gv~~~----~~~--~~~~iri~~~~~~t~e~i~~~l~~l~~~l 443 (451)
++|+... +.. ..+.+|++++..+|+++++++++.|++++
T Consensus 402 ~~gi~~~~~~~~~~~~~~~~~rvs~~~~~t~e~i~~l~~~L~~~~ 446 (447)
T PRK00451 402 EKGILGGYDLGRYYPELGNHLLVCVTEKRTKEDIDALVAALGEVL 446 (447)
T ss_pred hcCCCCCcccccccCCcCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 9987642 111 12579999988899999999999998764
No 287
>PLN02509 cystathionine beta-lyase
Probab=99.69 E-value=1.5e-15 Score=153.62 Aligned_cols=197 Identities=19% Similarity=0.190 Sum_probs=132.4
Q ss_pred cCCCCCHHHHHHHHHHhhccCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCC
Q 013008 134 SNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK 213 (451)
Q Consensus 134 ~~~~~~~~~~~l~~~l~~~~~~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~ 213 (451)
|....++...+|+++++++.+.+.+++++||+.|+..++.++. ++|+||+.++.|++.........
T Consensus 127 Y~r~gnpt~~aLE~~lA~leg~e~ai~~~SG~aAi~~il~ll~------------~GD~VI~~~~~y~~t~~ll~~~l-- 192 (464)
T PLN02509 127 YTRSGNPTRDALESLLAKLDKADRAFCFTSGMAALSAVTHLIK------------NGEEIVAGDDVYGGSDRLLSQVV-- 192 (464)
T ss_pred cCCCCCHHHHHHHHHHHHHhCCCEEEEeCcHHHHHHHHHHHhC------------CCCEEEEcCCchhhHHHHHHHHH--
Confidence 3444566799999999999998888999999988865554322 68999999999976532211100
Q ss_pred CCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCC
Q 013008 214 EHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLG 293 (451)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~g 293 (451)
......+.+++.+|++++++.+.+ ++++|++|.+.++.|.+.+ +++|.++|++||+++|+||+|. .+
T Consensus 193 -------~~~G~~v~~vd~~d~e~l~~ai~~-~TklV~lesPsNPtG~i~D----l~~I~~lAk~~g~~lIVD~A~a-~~ 259 (464)
T PLN02509 193 -------PRSGVVVKRVNTTNLDEVAAAIGP-QTKLVWLESPTNPRQQISD----IRKIAEMAHAQGALVLVDNSIM-SP 259 (464)
T ss_pred -------HHCCeEEEEeCCCCHHHHHHhCCc-CCeEEEEECCCCCCCCHHH----HHHHHHHHHHcCCEEEEECCcc-cc
Confidence 000122345566789999999965 5788888888888887655 9999999999999999999984 22
Q ss_pred cccccccccccCCCccee--eecccccC-C-ccccccccc-HHHHhhccCCCccCCCCCcHHHHHHHHHHHHHh
Q 013008 294 RTGYLWAHEHYGIFPDIM--TLAKPLAG-G-LPIGAALVT-EKVASAINYGDHGSTFAGSPLVCNAAIAVLDKI 362 (451)
Q Consensus 294 r~G~~~~~~~~~~~pdi~--t~sK~lg~-G-~~iG~v~~~-~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~ 362 (451)
..+.. .+...|++ +++|.++| | .-.|+++++ +.+.+.+...........+|..++.++..|+.+
T Consensus 260 ~~~~p-----l~~gaDivv~S~tK~l~G~gdv~gG~v~~~~~~l~~~~~~~~~~~g~~l~p~~A~l~lr~L~tL 328 (464)
T PLN02509 260 VLSRP-----LELGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQNSEGSGLAPFDCWLCLRGIKTM 328 (464)
T ss_pred ccCCh-----hhcCCcEEEecCcccccCCCccceeEEEeccHHHHHHHHHHHHhcCCCcCHHHHHHHHhhhhhH
Confidence 22321 22346766 56799986 4 456777654 444443321111112234788888888777765
No 288
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.69 E-value=5.4e-15 Score=146.68 Aligned_cols=197 Identities=13% Similarity=0.057 Sum_probs=133.7
Q ss_pred ccCCCCCHHHHHHHHHHhhccCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccC
Q 013008 133 VSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTS 212 (451)
Q Consensus 133 ~~~~~~~~~~~~l~~~l~~~~~~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~ 212 (451)
.+....++....|+++++...+.+..++++||++|+..++.... +++|+||+.++.|+++........
T Consensus 57 ~YsR~gnPt~~~Le~~la~le~~~~~v~~sSG~aAi~~~l~all-----------~~GD~Vlv~~~~Y~~~~~l~~~~l- 124 (395)
T PRK05967 57 TYGTRGTPTTDALCKAIDALEGSAGTILVPSGLAAVTVPFLGFL-----------SPGDHALIVDSVYYPTRHFCDTML- 124 (395)
T ss_pred ccCCCCChHHHHHHHHHHHHhCCCCEEEECcHHHHHHHHHHHhc-----------CCCCEEEEccCCcHHHHHHHHHHH-
Confidence 34556777789999999988876666777789999999987654 279999999999987653221111
Q ss_pred CCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCC
Q 013008 213 KEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGL 292 (451)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~ 292 (451)
......+.+++..+.+.+++++++ ++++|++|.+.++.+.+.+ +++|+++|+++|+++|+|+++...
T Consensus 125 --------~~~Gi~v~~vd~~~~e~l~~al~~-~TklV~lesPsNP~l~v~d----l~~I~~la~~~g~~vvVD~t~a~p 191 (395)
T PRK05967 125 --------KRLGVEVEYYDPEIGAGIAKLMRP-NTKVVHTEAPGSNTFEMQD----IPAIAEAAHRHGAIVMMDNTWATP 191 (395)
T ss_pred --------HhcCeEEEEeCCCCHHHHHHhcCc-CceEEEEECCCCCCCcHHH----HHHHHHHHHHhCCEEEEECCccCc
Confidence 011123455555567889999975 5789999976666555554 999999999999999999999642
Q ss_pred CcccccccccccCCCccee--eecccccC-C-cccccccccHHHHhhccCCCccCCCCCcHHHHHHHHHHHH
Q 013008 293 GRTGYLWAHEHYGIFPDIM--TLAKPLAG-G-LPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLD 360 (451)
Q Consensus 293 gr~G~~~~~~~~~~~pdi~--t~sK~lg~-G-~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~ 360 (451)
. .+.-.....|++ +.+|.++| | .-.|+++.++++.+.+...........+|..+...+..|+
T Consensus 192 ~------~~~pl~~GaDivv~S~tKy~~Gh~d~~~G~v~~~~~~~~~l~~~~~~~G~~~~p~da~l~~rgl~ 257 (395)
T PRK05967 192 L------YFRPLDFGVDISIHAATKYPSGHSDILLGTVSANEKCWPQLLEAHGTLGLCAGPDDTYQILRGLR 257 (395)
T ss_pred e------ecChhHcCCCEEEEecccccCCCCCeeEEEEEcCHHHHHHHHHHHHHcCCCCCHHHHHHHHcCcc
Confidence 1 122222346665 57799987 4 7778887787766655321111122356776655554444
No 289
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.69 E-value=1.4e-14 Score=144.08 Aligned_cols=293 Identities=14% Similarity=0.140 Sum_probs=180.2
Q ss_pred HHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHhhccCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEE
Q 013008 117 ADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSF 196 (451)
Q Consensus 117 p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~ 196 (451)
++..+++.+.+..... ....+...++++++++.++.+.+++++||++|+..+++++. . .++|+||+.
T Consensus 11 ~~e~~a~~~~~~~~~~---~~~g~~~~~~e~~la~~~g~~~~v~~~sgt~aL~~~l~al~--~--------~pGd~Viv~ 77 (376)
T TIGR02379 11 GQELEYIAEAISEGKL---SGDGPFSRRCETWLENRTGTKKALLTPSCTAALEMAALLLD--I--------QPGDEVIMP 77 (376)
T ss_pred HHHHHHHHHHHHcCCc---cCCcHHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHcC--C--------CCcCEEEEC
Confidence 4557788887765321 11234578999999999999999999999999999887541 1 268999999
Q ss_pred cCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHH
Q 013008 197 TNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDAC 276 (451)
Q Consensus 197 ~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~ 276 (451)
+++|.+........+....+ .+..++.. .-|++++++++.+ ++++|+ |++. .|...+ +++|.++|
T Consensus 78 ~~t~~~~~~~~~~~G~~~v~----vd~d~~~~---~~d~~~le~~i~~-~tk~Ii--p~~~-~G~~~d----~~~I~~la 142 (376)
T TIGR02379 78 SYTFVSTANAFVLRGAKIVF----VDIRPDTM---NIDETLIESAITH-RTKAIV--PVHY-AGVACD----MDTIMALA 142 (376)
T ss_pred CCCcHHHHHHHHHcCCEEEE----EecCCCcC---CCCHHHHHHhcCc-CceEEE--EeCC-CCCccC----HHHHHHHH
Confidence 99997764333322221111 11111110 0278999999875 566665 4443 354455 88999999
Q ss_pred HHhCCEEEEeccccCCCc--ccccccccccCCCcceeeec----ccccCCccccccccc-HHHHhhccCCC---------
Q 013008 277 DDAGALLVFDEVQCGLGR--TGYLWAHEHYGIFPDIMTLA----KPLAGGLPIGAALVT-EKVASAINYGD--------- 340 (451)
Q Consensus 277 ~~~g~llI~DEv~tg~gr--~G~~~~~~~~~~~pdi~t~s----K~lg~G~~iG~v~~~-~~i~~~~~~~~--------- 340 (451)
++||+++|.|++|+ +|. .|. ..+..-|+.+|| |.++.|.+.|+++.+ +++.+.++...
T Consensus 143 ~~~~i~vIeDaa~~-~g~~~~~~-----~~g~~~~~~~fSf~~~K~l~~g~~gG~v~~~~~~~~~~~~~~~~~g~~~~~~ 216 (376)
T TIGR02379 143 NKHQLFVIEDAAQG-VMSTYKGR-----ALGSIGHLGTFSFHETKNYTSGGEGGALLINDQAFIERAEIIREKGTNRSQF 216 (376)
T ss_pred HHCCCEEEEECccc-cCCccCCc-----ccCCCCCEEEEeCCCCCcCcccCCceEEEECCHHHHHHHHHHHHhCCCCccc
Confidence 99999999999996 432 121 223334788888 999877788988775 77777764311
Q ss_pred ------------ccCCCCCcHHHHHHHHHHHHHhcChHHH--------HHHHhCCC--C-cc--eec-ccc---eeEEEE
Q 013008 341 ------------HGSTFAGSPLVCNAAIAVLDKISNPAFL--------ASKLARNP--H-VK--DVR-GLG---LIIGIE 391 (451)
Q Consensus 341 ------------~~~t~~~~~~~~aaa~aal~~~~~~~~~--------~~~~~~~~--~-~~--~v~-g~G---~~~~~~ 391 (451)
.+..+..+.+.++.+++.|+.+++..-. .+.+++++ . +. .+. +.. .++.+.
T Consensus 217 ~~~~~~~~~~~~~g~n~~~~~~~Aa~g~~qL~~l~~~~~~r~~~~~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 296 (376)
T TIGR02379 217 FRGEVDKYTWRDIGSSYLPSELQAAYLWAQLEQADRINQDRLATWQLYQDALKPLEEKGIIELPSIPNGCQHNAHMFYIK 296 (376)
T ss_pred cccCCCcceeeeecccCCccHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhccCCcCCeeeCCCCCCCCeeeeEEEEEE
Confidence 1122233456666666667765431111 11222222 1 10 011 111 123344
Q ss_pred ecC--ChHHHHHHHHHCCceeeec----CC---------------------CCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 013008 392 FDV--SATPVVDACRDSGLLVLTA----GK---------------------GNVVRLVPPLIISEQELDQAVEILCKTL 443 (451)
Q Consensus 392 ~~~--~~~~~~~~l~~~Gv~~~~~----~~---------------------~~~iri~~~~~~t~e~i~~~l~~l~~~l 443 (451)
++. +..++.+.|.++||...+. .. ...+.+-.....+++|++++++.|++++
T Consensus 297 ~~~~~~r~~l~~~L~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~~~~~~~~~l~LP~~~~l~~~~~~~i~~~i~~~~ 375 (376)
T TIGR02379 297 LKDEDDRNELIKYLKEQEIMAVFHYVPLHSSPAGRYFGRFHGEDIYTTKESERLVRLPLYYGLSKEDQARVIQTICDYL 375 (376)
T ss_pred ECCcCCHHHHHHHHHHCCCCccccCcCCCcchhHHhhCCCCCCChHHHHHHhceEEccCCCCCCHHHHHHHHHHHHHHh
Confidence 432 4678999999999976521 00 1134444445689999999999998764
No 290
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.68 E-value=3.5e-15 Score=148.57 Aligned_cols=276 Identities=18% Similarity=0.208 Sum_probs=170.2
Q ss_pred cCCCCCHHHHHHHHHHhhccCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCC
Q 013008 134 SNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK 213 (451)
Q Consensus 134 ~~~~~~~~~~~l~~~l~~~~~~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~ 213 (451)
+....++...+|+++++++++.+.+++++||+.|+..++.++. ++|+||+.++.|++.........
T Consensus 41 Y~r~~~p~~~~le~~la~l~g~~~~l~~~sG~~al~~~l~ll~------------~Gd~Vl~~~~~y~~~~~~~~~~~-- 106 (378)
T TIGR01329 41 YTRSGNPTRTALESLLAKLDKADRAFAFSSGMAALDVITRLLN------------NGDEIIAGDDLYGGTDRLLTQVV-- 106 (378)
T ss_pred cCCCCChHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHhC------------CCCEEEEcCCCchHHHHHHHHHH--
Confidence 3444566688999999999998888999999999887665321 68999999998865432111000
Q ss_pred CCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCC
Q 013008 214 EHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLG 293 (451)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~g 293 (451)
......+.+++..|++++++++++ ++++|++|.+.++.|.+.+ +++|.++|++||+++|+|+++.. +
T Consensus 107 -------~~~G~~v~~vd~~d~~~le~~i~~-~tklv~le~psnptg~v~d----l~~I~~la~~~g~~vivD~a~~~-~ 173 (378)
T TIGR01329 107 -------PRSGVVVVHVDTTDLDKVKAALGP-KTKLVLLESPTNPLQKIVD----IRKISEMAHAQNALVVVDNTMMS-P 173 (378)
T ss_pred -------HHcCcEEEEeCCCCHHHHHHhcCc-CceEEEEECCCCCCCeeec----HHHHHHHHHHcCCEEEEECCCcc-c
Confidence 011133456666789999999974 6789999988888887776 99999999999999999999832 1
Q ss_pred cccccccccccCCCccee--eecccccC--Ccccccccc-cHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcC--hH
Q 013008 294 RTGYLWAHEHYGIFPDIM--TLAKPLAG--GLPIGAALV-TEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISN--PA 366 (451)
Q Consensus 294 r~G~~~~~~~~~~~pdi~--t~sK~lg~--G~~iG~v~~-~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~ 366 (451)
..... . +...|++ +.+|.++| +...|++++ ++++.+.+...........+|..++.++..++.+.. +.
T Consensus 174 ~~~~~--l---~~g~Di~v~S~tK~l~G~~~~~~G~v~~~~~~~~~~~~~~~~~~G~~~~~~~a~l~~~~l~tl~~R~e~ 248 (378)
T TIGR01329 174 LLCNP--L---ELGADIVYHSATKFLAGHSDVMAGVLAVKGEEIAKKVYFLQNSTGSGLAPFDCWLLLRGIKTLAIRIEK 248 (378)
T ss_pred ccCCh--h---hcCCcEEEEecceeccCCccceeEEEEeCcHHHHHHHHHHHHhcCCcCCHHHHHHHHccCCCHHHHHHH
Confidence 11111 1 2235666 55799976 366888877 456656554322212233456655443333322110 00
Q ss_pred ------HHHHHHhCCCCcce------------------ecccceeEEEEecC-C-hHHHHHHHHHCCceeeecC------
Q 013008 367 ------FLASKLARNPHVKD------------------VRGLGLIIGIEFDV-S-ATPVVDACRDSGLLVLTAG------ 414 (451)
Q Consensus 367 ------~~~~~~~~~~~~~~------------------v~g~G~~~~~~~~~-~-~~~~~~~l~~~Gv~~~~~~------ 414 (451)
.+.+.++++|.+.. ..+.|.++.|++.. . ..+|...|...++.+.-++
T Consensus 249 ~~~na~~la~~L~~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~~~~~~~~~~~~~L~~~~i~~s~G~~~sl~~ 328 (378)
T TIGR01329 249 QQENARAIAMFLSTHPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFETGSVALSKRLVEATKLFSITVSFGSVNSLIS 328 (378)
T ss_pred HHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCcceEEEEEECCHHHHHHHHHhCcCcccccCCCCCCceee
Confidence 00113334442221 23567788888831 1 4466666643333332211
Q ss_pred --------------------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 013008 415 --------------------KGNVVRLVPPLIISEQELDQAVEILCKTLPV 445 (451)
Q Consensus 415 --------------------~~~~iri~~~~~~t~e~i~~~l~~l~~~l~~ 445 (451)
..+.+|+++.+ |+.+.+++-|+++|++
T Consensus 329 ~p~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al~~ 375 (378)
T TIGR01329 329 MPCFMSHASIPAEVREERGLPEDLVRLSVGI----EDVDDLISDLDIAFVT 375 (378)
T ss_pred CCCccccccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHHh
Confidence 12467886554 5677778888888764
No 291
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.68 E-value=5.1e-15 Score=146.42 Aligned_cols=278 Identities=22% Similarity=0.229 Sum_probs=171.8
Q ss_pred cccCCCCCHHHHHHHHHHhhccCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhcc
Q 013008 132 HVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALT 211 (451)
Q Consensus 132 ~~~~~~~~~~~~~l~~~l~~~~~~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~ 211 (451)
+.+....++....|+++|+++.+.+.++.++||..|+..++..+.+ ++++||+.+..|++.........
T Consensus 47 ~~Y~R~gnPt~~~le~~la~Le~g~~a~~~~SGmaAi~~~l~~ll~-----------~Gd~iv~~~~~Y~~t~~~~~~~l 115 (386)
T PF01053_consen 47 YIYSRYGNPTVRALEQRLAALEGGEDALLFSSGMAAISAALLALLK-----------PGDHIVASDDLYGGTYRLLEELL 115 (386)
T ss_dssp CSBTTTC-HHHHHHHHHHHHHHT-SEEEEESSHHHHHHHHHHHHS------------TTBEEEEESSSSHHHHHHHHHCH
T ss_pred cceeccccccHHHHHHHHHHhhcccceeeccchHHHHHHHHHhhcc-----------cCCceEecCCccCcchhhhhhhh
Confidence 4456677888999999999999999999999999999999886652 68999999999987643322111
Q ss_pred CCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhC-CEEEEecccc
Q 013008 212 SKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAG-ALLVFDEVQC 290 (451)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g-~llI~DEv~t 290 (451)
......+.+++..|++++++++++ ++++|++|++.++...++. +++|+++|+++| +++|+|....
T Consensus 116 ---------~~~gv~v~~~d~~d~~~l~~~l~~-~t~~v~~EspsNP~l~v~D----l~~i~~~a~~~g~~~~vVDnT~a 181 (386)
T PF01053_consen 116 ---------PRFGVEVTFVDPTDLEALEAALRP-NTKLVFLESPSNPTLEVPD----LEAIAKLAKEHGDILVVVDNTFA 181 (386)
T ss_dssp ---------HHTTSEEEEESTTSHHHHHHHHCT-TEEEEEEESSBTTTTB-------HHHHHHHHHHTTT-EEEEECTTT
T ss_pred ---------cccCcEEEEeCchhHHHHHhhccc-cceEEEEEcCCCccccccc----HHHHHHHHHHhCCceEEeecccc
Confidence 112244567787899999999976 8999999998777766666 999999999998 9999999974
Q ss_pred CCCcccccccccccCCCccee--eecccccC-C-ccccccccc--HHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcC
Q 013008 291 GLGRTGYLWAHEHYGIFPDIM--TLAKPLAG-G-LPIGAALVT--EKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISN 364 (451)
Q Consensus 291 g~gr~G~~~~~~~~~~~pdi~--t~sK~lg~-G-~~iG~v~~~--~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~ 364 (451)
.. ..+.-+....|++ +.+|.++| | .-.|+++++ +++++.++..........+|..+...+..|+.+.-
T Consensus 182 tp------~~~~pL~~GaDivv~S~TKyl~Ghsdv~~G~vv~~~~~~~~~~l~~~~~~~G~~~~p~da~ll~rgl~Tl~~ 255 (386)
T PF01053_consen 182 TP------YNQNPLELGADIVVHSATKYLSGHSDVMGGAVVVNGSSELYDRLREFRRLLGATLSPFDAWLLLRGLRTLPL 255 (386)
T ss_dssp HT------TTC-GGGGT-SEEEEETTTTTTTSSSE-EEEEEESSHHHHHHHHHHHHHHHT-B--HHHHHHHHHHHTTHHH
T ss_pred ce------eeeccCcCCceEEEeeccccccCCcceeeEEEEECchhhhhhhhcchhhhcCccchHHHHHHHhcCCCcHHH
Confidence 22 1222233336766 56799986 5 667888765 47777654221111122355555554444432210
Q ss_pred --hH------HHHHHHhCCCCccee------------------cccceeEEEEecCC---hHHHHHHHHH--CCce----
Q 013008 365 --PA------FLASKLARNPHVKDV------------------RGLGLIIGIEFDVS---ATPVVDACRD--SGLL---- 409 (451)
Q Consensus 365 --~~------~~~~~~~~~~~~~~v------------------~g~G~~~~~~~~~~---~~~~~~~l~~--~Gv~---- 409 (451)
+. .+.+.++.+|.+..| .+.|.++.|++... ..+|.+.|.- .|.-
T Consensus 256 R~~~~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~g~ggl~sf~l~~~~~~~~~f~~~l~l~~~~~SlGg~ 335 (386)
T PF01053_consen 256 RMERQNENAEALAEFLEEHPKVKRVYYPGLPSHPQHELAKRQMSGGGGLLSFELKGGEEAARRFLDALKLFSIAPSLGGV 335 (386)
T ss_dssp HHHHHHHHHHHHHHHHHTSTTEEEEEETTSTTSTTHHHHHHHCSSCTSEEEEEESSHHHHHHHHHHH-SSSEESSS-SSS
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEcccccccceeeeeecccccCceeEEEeccchhhhHhHHhhhhhHhhhhhcCCc
Confidence 00 011155667755543 35567899999533 2344444421 1111
Q ss_pred ---e-eec---------------C-CCCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q 013008 410 ---V-LTA---------------G-KGNVVRLVPPLIISEQELDQAVEILCKTLP 444 (451)
Q Consensus 410 ---~-~~~---------------~-~~~~iri~~~~~~t~e~i~~~l~~l~~~l~ 444 (451)
+ .|. | ..+.+|+++.+ |+.+.+++.|+++|+
T Consensus 336 ~SLi~~p~~~~h~~~~~e~~~~~Gi~~~liRlSvGl----Ed~~dLi~Dl~~AL~ 386 (386)
T PF01053_consen 336 ESLISHPASTSHRSLSPEERAEAGISDGLIRLSVGL----EDPDDLIADLEQALE 386 (386)
T ss_dssp S-EEEETTCTTTTTSCHHHHHHTTS-TTEEEEE--S----S-HHHHHHHHHHHHH
T ss_pred ccccccccchhhccCChhhhhccCCCCCeeEEEecc----CCHHHHHHHHHHhcC
Confidence 1 121 0 12568886554 667778888888774
No 292
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.67 E-value=1.1e-14 Score=145.61 Aligned_cols=190 Identities=16% Similarity=0.123 Sum_probs=128.0
Q ss_pred CCCCCHHHHHHHHHHhhccCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCC
Q 013008 135 NMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKE 214 (451)
Q Consensus 135 ~~~~~~~~~~l~~~l~~~~~~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~ 214 (451)
.....+...+|+++++++.+.+..+.++||+.|+..++.++. ++|+||+.++.|++.........
T Consensus 49 ~r~~~p~~~~le~~lA~l~g~~~~v~~~sG~~ai~~~l~~l~------------~Gd~Vlv~~~~y~~~~~~~~~~~--- 113 (390)
T PRK08064 49 SRSGNPTREALEDIIAELEGGTKGFAFASGMAAISTAFLLLS------------KGDHVLISEDVYGGTYRMITEVL--- 113 (390)
T ss_pred cCCCChhHHHHHHHHHHHhCCCCeEEECCHHHHHHHHHHHhC------------CCCEEEEccCccchHHHHHHHHH---
Confidence 444566688999999999986677788999999988886322 58999999999976543221110
Q ss_pred CcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCc
Q 013008 215 HYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGR 294 (451)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr 294 (451)
......+.+++..|++++++.+.+ ++++|++|.++++.|.+.+ +++|.++|+++|+++|+||+|..+ .
T Consensus 114 ------~~~G~~v~~v~~~d~~~l~~~l~~-~tklV~l~~p~NptG~~~d----l~~I~~la~~~g~~vvvD~a~~~~-~ 181 (390)
T PRK08064 114 ------SRFGIEHTFVDMTNLEEVAQNIKP-NTKLFYVETPSNPLLKVTD----IRGVVKLAKAIGCLTFVDNTFLTP-L 181 (390)
T ss_pred ------HHcCCEEEEECCCCHHHHHHhcCC-CceEEEEECCCCCCcEecc----HHHHHHHHHHcCCEEEEECCCCcc-c
Confidence 011233556666789999999865 5688888877777787766 999999999999999999998543 1
Q ss_pred ccccccccccCCCccee--eecccccC--Ccccccccc-cHHHHhhccCCCccCCCCCcHHHHHHHH
Q 013008 295 TGYLWAHEHYGIFPDIM--TLAKPLAG--GLPIGAALV-TEKVASAINYGDHGSTFAGSPLVCNAAI 356 (451)
Q Consensus 295 ~G~~~~~~~~~~~pdi~--t~sK~lg~--G~~iG~v~~-~~~i~~~~~~~~~~~t~~~~~~~~aaa~ 356 (451)
.... . .+| .|++ +++|.++| |.-.|++++ ++++++.++..........+|..+..+.
T Consensus 182 ~~~~--~-~~g--~Divv~S~tK~~~G~~~~laG~~v~~~~~~~~~l~~~~~~~g~~~~~~~a~l~~ 243 (390)
T PRK08064 182 LQKP--L-DLG--ADVVLHSATKFLAGHSDVLAGLAVVKDEELAQKLYFLQNSFGAVLGVQDCWLVL 243 (390)
T ss_pred ccCc--h-hhC--CcEEEeecceeccCCccceeEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHHH
Confidence 1111 1 223 5665 56799875 344566655 4678777754333233334555544433
No 293
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.67 E-value=2.3e-15 Score=149.86 Aligned_cols=172 Identities=15% Similarity=0.100 Sum_probs=121.2
Q ss_pred cCCCCCHHHHHHHHHHhhccCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCC
Q 013008 134 SNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK 213 (451)
Q Consensus 134 ~~~~~~~~~~~l~~~l~~~~~~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~ 213 (451)
+..+.++...+|+++++++.+.+..++++||+.|+.+++.++. ++++||+.++.|++..........
T Consensus 44 y~r~~~p~~~~Le~~la~l~g~~~al~~~SG~~Al~~~l~~l~------------pGd~Vi~~~~~y~~t~~~~~~~~~- 110 (380)
T PRK06176 44 YSRSGNPTRFALEELIADLEGGVKGFAFASGLAGIHAVFSLFQ------------SGDHVLLGDDVYGGTFRLFDKVLV- 110 (380)
T ss_pred ccCCCChhHHHHHHHHHHHhCCCCEEEECCHHHHHHHHHHHcC------------CCCEEEEcCCChhHHHHHHHHHHH-
Confidence 4556677789999999999998888889999999987664322 689999999999765422211110
Q ss_pred CCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCC
Q 013008 214 EHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLG 293 (451)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~g 293 (451)
.....+.+++..|++++++++++ ++++|++|.+.++.|.+.+ +++|.++|++||+++|+|++++..
T Consensus 111 --------~~gi~v~~vd~~d~e~l~~ai~~-~t~lV~lesP~Nptg~~~d----i~~I~~la~~~gi~vivD~t~a~~- 176 (380)
T PRK06176 111 --------KNGLSCTIIDTSDLSQIKKAIKP-NTKALYLETPSNPLLKITD----LAQCASVAKDHGLLTIVDNTFATP- 176 (380)
T ss_pred --------hcCeEEEEcCCCCHHHHHHhcCc-CceEEEEECCCCCCceecC----HHHHHHHHHHcCCEEEEECCcccc-
Confidence 11122445555689999999875 6788888877777777666 999999999999999999999642
Q ss_pred cccccccccccCCCcceee--ecccccC-C-ccccccccc-HHHHhhcc
Q 013008 294 RTGYLWAHEHYGIFPDIMT--LAKPLAG-G-LPIGAALVT-EKVASAIN 337 (451)
Q Consensus 294 r~G~~~~~~~~~~~pdi~t--~sK~lg~-G-~~iG~v~~~-~~i~~~~~ 337 (451)
..+.. .+...|+++ ++|.++| | .-.|+++++ +++.+.++
T Consensus 177 ~~~~p-----~~~gaDivv~S~tK~l~g~~d~~gG~vv~~~~~~~~~~~ 220 (380)
T PRK06176 177 YYQNP-----LLLGADIVVHSGTKYLGGHSDVVAGLVTTNNEALAQEIA 220 (380)
T ss_pred ccCCc-----cccCCCEEEecCceeccCCccceeeEEEecHHHHHHHHH
Confidence 22221 133467765 4599975 4 455667764 56666554
No 294
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.67 E-value=3.5e-14 Score=144.70 Aligned_cols=303 Identities=15% Similarity=0.117 Sum_probs=174.7
Q ss_pred CCCHHHHHHHHHHH-hhcccccC---C-CCCHHHHHHHH----HHhhccC-CCeEE-e---cCCHHHHHHHHHHHHHHHh
Q 013008 114 HGDADWIKAVVDQA-NVLTHVSN---M-YYSIPQIELAK----RLVACSF-ADRVF-F---SNTGTEANEAAIKFARKFQ 179 (451)
Q Consensus 114 ~~~p~v~~a~~~~~-~~~~~~~~---~-~~~~~~~~l~~----~l~~~~~-~e~v~-~---~~sG~eA~~~al~~a~~~~ 179 (451)
+..|.+++|+...+ .++..++. . ..+....++++ +..+.++ .+..+ + .+||+.||.+++..+..
T Consensus 45 ~~s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~~~d~lE~~~~~~~~~~f~~~~~~~~~nv~~~SG~~AN~av~~aL~~-- 122 (475)
T PLN03226 45 FTSRAVMEALGSCLTNKYSEGLPGARYYGGNEYIDQIETLCQKRALEAFRLDPEKWGVNVQPLSGSPANFAVYTALLQ-- 122 (475)
T ss_pred cCCHHHHHHHhhHHhccccCCCCCCcCcCCChhHHHHHHHHHHHHHHHhCCCcceeEEecCcCchHHHHHHHHHHhCC--
Confidence 36789999999888 55544321 1 12344455543 2334455 33222 2 38999999999997752
Q ss_pred hhcCCCCCCCCceEEEEcCCc-----cCChhhhhhccCCCCcCCCCcCCCCCeeEeeCC------CHHHHHHhcCCCCeE
Q 013008 180 RHSNPDSKEPATEFVSFTNSF-----HGRTMGALALTSKEHYRSPFEPVMPGVNFVEYG------NIEATRKLIQPGKTA 248 (451)
Q Consensus 180 ~~~~~~~~~~~~~ii~~~~~y-----hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------d~~~le~~l~~~~~a 248 (451)
++|+|+..+..- |++......++....+ -.+..+.+| |+++|++++...+++
T Consensus 123 ---------pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~--------~~~~~y~~~~~~g~iD~d~Le~~l~~~~pk 185 (475)
T PLN03226 123 ---------PHDRIMGLDLPHGGHLSHGYQTDGKKISATSIY--------FESMPYRLDESTGLIDYDKLEKKAMLFRPK 185 (475)
T ss_pred ---------CCCEEEECCCCcCcchhhhhhhcccccccceEE--------EEeeeeeecCCCCCcCHHHHHHHHhhcCCe
Confidence 688898865422 3332221111111100 000112234 899999998744555
Q ss_pred EEEE-ccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccccccCCCccee--eecccccCCccccc
Q 013008 249 AVFV-EPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIM--TLAKPLAGGLPIGA 325 (451)
Q Consensus 249 avi~-ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~--t~sK~lg~G~~iG~ 325 (451)
.|++ ++++++.+ + +++|+++|++||++|++|++|. +|..+.......++ ..|++ |++|+|.|. +.|+
T Consensus 186 lIv~~~S~~s~~~---D----~a~i~~ia~~~ga~LlvD~AH~-~Gli~~~~~~~p~~-~~Div~~t~hK~L~GP-~Gg~ 255 (475)
T PLN03226 186 LIIAGASAYPRDW---D----YARMRKIADKVGALLMCDMAHI-SGLVAAQEAASPFE-YCDVVTTTTHKSLRGP-RGGM 255 (475)
T ss_pred EEEEecCcCCCcc---C----HHHHHHHHHHcCCEEEEEchhh-hCcccCCCCCCCCC-CCeEEEecCcccccCC-CceE
Confidence 5665 66655443 3 7899999999999999999994 44333221111122 36766 567999642 2377
Q ss_pred ccccHHHH-----------hh---ccCC-CccCCCCCcHHHHHHHHHHHHHhcChHH---HHH-------HHhCC--CCc
Q 013008 326 ALVTEKVA-----------SA---INYG-DHGSTFAGSPLVCNAAIAVLDKISNPAF---LAS-------KLARN--PHV 378 (451)
Q Consensus 326 v~~~~~i~-----------~~---~~~~-~~~~t~~~~~~~~aaa~aal~~~~~~~~---~~~-------~~~~~--~~~ 378 (451)
+++++++. +. +... ....+-+.++...++..++|+.+..+++ .++ +.+.+ ..+
T Consensus 256 I~~~~~~~~~~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~~i~~~~~~~~~~~~~~na~~L~~~L~~~G~ 335 (475)
T PLN03226 256 IFFRKGPKPPKGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKAYQKQVKANAAALANRLMSKGY 335 (475)
T ss_pred EEEchhhcccccCCCccHHHHHHHhccccCCccCCCchHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 77776543 22 2211 1112223456667777788988765433 332 22211 122
Q ss_pred ceecc--cceeEEEEec---CChHHHHHHHHHCCceeeecC--------CCCEEEE----eCCCCCCHHHHHHHHHHHHH
Q 013008 379 KDVRG--LGLIIGIEFD---VSATPVVDACRDSGLLVLTAG--------KGNVVRL----VPPLIISEQELDQAVEILCK 441 (451)
Q Consensus 379 ~~v~g--~G~~~~~~~~---~~~~~~~~~l~~~Gv~~~~~~--------~~~~iri----~~~~~~t~e~i~~~l~~l~~ 441 (451)
.-+.+ ...+..+++. ....++.+.|.+.||++.... .+..+|+ .....++++|++++.+.|.+
T Consensus 336 ~l~~~~t~~hi~lv~~~~~gi~~~~~~~~L~~~~I~~nk~~~p~~~~~~~~~giRiGt~~lt~~g~~~~d~~~ia~~i~~ 415 (475)
T PLN03226 336 KLVTGGTDNHLVLWDLRPLGLTGSRVEKVLDLAHITLNKNAVPGDSSALVPGGVRIGTPAMTSRGLVEKDFEKVAEFLHR 415 (475)
T ss_pred EEEcCCCCCCEEEEEccCCCCCHHHHHHHHHHCCCEECCCCCCCCcccCCCCCcccCcHHHHHCCCCHHHHHHHHHHHHH
Confidence 21211 1345566662 345678888888899886431 1245777 44678899999999999999
Q ss_pred HHHH
Q 013008 442 TLPV 445 (451)
Q Consensus 442 ~l~~ 445 (451)
+++.
T Consensus 416 ~~~~ 419 (475)
T PLN03226 416 AVTI 419 (475)
T ss_pred HHHH
Confidence 9873
No 295
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.67 E-value=9.3e-15 Score=144.87 Aligned_cols=280 Identities=16% Similarity=0.137 Sum_probs=181.0
Q ss_pred cccCCCCCHHHHHHHHHHhhccCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhcc
Q 013008 132 HVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALT 211 (451)
Q Consensus 132 ~~~~~~~~~~~~~l~~~l~~~~~~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~ 211 (451)
+.|....++....|+++|+++.+.+.+++++||+.|+.+++..+. .++|+||+.+..|++.........
T Consensus 54 ~~YsR~~nPt~~~le~~la~LEg~~~a~~~~SGmaAi~~~~~~ll-----------~~GD~Vv~~~~~Yg~t~~l~~~~l 122 (395)
T PRK08114 54 LFYGRRGTLTHFSLQEAMCELEGGAGCALYPCGAAAVANAILAFV-----------EQGDHVLMTGTAYEPTQDFCSKIL 122 (395)
T ss_pred ccccCCCChhHHHHHHHHHHHhCCCeEEEEhHHHHHHHHHHHHHc-----------CCCCEEEEeCCCcHHHHHHHHHHH
Confidence 345666788899999999999999999999999999999888654 168999999888876653321110
Q ss_pred CCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhC--CEEEEeccc
Q 013008 212 SKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAG--ALLVFDEVQ 289 (451)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g--~llI~DEv~ 289 (451)
......+.+++..|.+.+++++++ ++++|++|.+.++.|.+.+ +++|+++|+++| +++|+|.++
T Consensus 123 ---------~~~Gi~v~~vd~~d~~~l~~~l~~-~TrlV~~EtpsNp~~~v~D----I~~Ia~ia~~~g~g~~lvVDnT~ 188 (395)
T PRK08114 123 ---------SKLGVTTTWFDPLIGADIAKLIQP-NTKVVFLESPGSITMEVHD----VPAIVAAVRSVNPDAVIMIDNTW 188 (395)
T ss_pred ---------HhcCcEEEEECCCCHHHHHHhcCC-CceEEEEECCCCCCCEeec----HHHHHHHHHHhCCCCEEEEECCC
Confidence 111234566777789999999975 6899999999999888888 999999999985 999999998
Q ss_pred cCCCcccccccccccCCCcceeee--cccccC-C-cccccccccHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhc-C
Q 013008 290 CGLGRTGYLWAHEHYGIFPDIMTL--AKPLAG-G-LPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKIS-N 364 (451)
Q Consensus 290 tg~gr~G~~~~~~~~~~~pdi~t~--sK~lg~-G-~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~-~ 364 (451)
+. +. .+.-..+..|+++. .|.++| | .-.|.++.++++.+.+........-..+|..+...+..|+.+. +
T Consensus 189 a~----p~--~~~pl~~GaDivv~S~tKyl~Ghsdv~~G~v~~~~~~~~~l~~~~~~~G~~~~p~~a~l~~rgl~TL~lR 262 (395)
T PRK08114 189 AA----GV--LFKALDFGIDISIQAGTKYLVGHSDAMIGTAVANARCWEQLRENSYLMGQMVDADTAYMTSRGLRTLGVR 262 (395)
T ss_pred cc----cc--ccCHHHcCCcEEEEcCcccccCCCcceeEEEEcCHHHHHHHHHHHHhccCCCCHHHHHHHHcCCCcHHHH
Confidence 52 21 23333445787755 599987 4 7778777787766655421111112346666665544443221 0
Q ss_pred -hH------HHHHHHhCCCCccee------------------cccceeEEEEecC--ChH---HHHHHHH--HC-----C
Q 013008 365 -PA------FLASKLARNPHVKDV------------------RGLGLIIGIEFDV--SAT---PVVDACR--DS-----G 407 (451)
Q Consensus 365 -~~------~~~~~~~~~~~~~~v------------------~g~G~~~~~~~~~--~~~---~~~~~l~--~~-----G 407 (451)
+. .+.++++.+|.+..| .+.|.++.|+++. ... +|.+.|. .. |
T Consensus 263 ~~~~~~na~~va~~L~~hp~V~~V~yPgl~~~p~~~~~~~~~~g~gg~~sf~l~~~~~~~~~~~f~~~l~l~~~a~SlGg 342 (395)
T PRK08114 263 LRQHEESSLKVAEWLAEHPEVARVNHPALPGCKGHEFWKRDFTGSSGLFSFVLKKKLTDEQLANYLDNFSLFSMAYSWGG 342 (395)
T ss_pred HHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCccHHHHHhhCCCCceEEEEEecCcccHHHHHHHHHhCCcceeecccCC
Confidence 11 111155666644322 3568899999853 122 3333321 11 1
Q ss_pred c--eee---e-----------cC-CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 013008 408 L--LVL---T-----------AG-KGNVVRLVPPLIISEQELDQAVEILCKTLPVL 446 (451)
Q Consensus 408 v--~~~---~-----------~~-~~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~ 446 (451)
+ ++. | .+ .++.+|+++.+ |+.+.+++-|+++|+.+
T Consensus 343 ~~SLi~~~~~~~~~~~~~~~~~~~~~~liRlSvGl----Ed~~DLi~Dl~~Al~~~ 394 (395)
T PRK08114 343 FESLILANQPEEIAAIRPAGEVDFTGTLIRLHIGL----EDVDDLIADLAAGFARI 394 (395)
T ss_pred ccceeccCCchhhhccCChhHhcCCCCeEEEEecc----CCHHHHHHHHHHHHHhh
Confidence 1 111 0 00 13568886554 56777788888887653
No 296
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.66 E-value=6.2e-14 Score=143.90 Aligned_cols=316 Identities=16% Similarity=0.116 Sum_probs=179.7
Q ss_pred CCCHHHHHHHHHHHhhcccccCCC--------CCHHHHHHHHHHhhccCCCeEEec-CCHHHHHHHHHHHHHHHhhhcCC
Q 013008 114 HGDADWIKAVVDQANVLTHVSNMY--------YSIPQIELAKRLVACSFADRVFFS-NTGTEANEAAIKFARKFQRHSNP 184 (451)
Q Consensus 114 ~~~p~v~~a~~~~~~~~~~~~~~~--------~~~~~~~l~~~l~~~~~~e~v~~~-~sG~eA~~~al~~a~~~~~~~~~ 184 (451)
|.+|.+.+++.+...... ++.| ..+...++.++++++++.+.+.+. ++|+.+...++.+++.+....+.
T Consensus 81 ~~~p~i~~~~~~~~~~~~--~tpYq~e~~sqG~lel~~~~~~~la~l~G~~~~~l~~~~GA~a~~~~l~~~r~~~~~~Gd 158 (481)
T PRK04366 81 KYNPKINEKVARLPGFAE--LHPLQPEETVQGALELMYELQEWLKEITGMDAVTLQPAAGAHGELTGLLMIRAYHEARGD 158 (481)
T ss_pred CCCHHHHHHHHhCcchhc--CCCCCChhhhhHHHHHHHHHHHHHHHHhCCCceEEEeCcHHHHHHHHHHHHHHHhhccCc
Confidence 467888888877522211 1222 112366788888888886654444 56777766655555443221110
Q ss_pred CCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEccccCCCCcccc
Q 013008 185 DSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSA 264 (451)
Q Consensus 185 ~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~~~~~G~~~~ 264 (451)
.++++||+.++.|+.+. ......|..... .+...+. ..|+++|++++.+ ++++|++...+ +.|.+
T Consensus 159 ---~~~~~Vlv~~~~hp~~~-~~~~~~G~~vv~---v~~~~~~----~~D~e~L~~~i~~-~t~~V~v~~Pn-~tG~~-- 223 (481)
T PRK04366 159 ---TKRTEVIVPDSAHGTNP-ASAAMAGFKVVE---IPSNEDG----LVDLEALKAAVGE-DTAALMLTNPN-TLGLF-- 223 (481)
T ss_pred ---CCCCEEEEcCCccHhHH-HHHHHcCCEEEE---eecCCCC----CcCHHHHHhhccc-CCeEEEEeCCC-Ccccc--
Confidence 02458999988765544 333332221111 1111111 1289999999975 45555554333 45543
Q ss_pred CHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccccccCCCcceeee--cccccC-----CcccccccccHHHHhhcc
Q 013008 265 TKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTL--AKPLAG-----GLPIGAALVTEKVASAIN 337 (451)
Q Consensus 265 ~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~t~--sK~lg~-----G~~iG~v~~~~~i~~~~~ 337 (451)
...+++|.++|+++|+++|+|+++. .+..|.. ....+ ..|++++ -|.|++ |-.+|++.+++++.+.+.
T Consensus 224 -~~dl~eI~~~a~~~gal~iVD~a~~-~~~~g~~-~~~~~--GaD~~~~~~hK~l~~P~g~Ggp~~G~l~~~~~~~~~lp 298 (481)
T PRK04366 224 -ERNILEIAEIVHEAGGLLYYDGANL-NAILGKA-RPGDM--GFDVVHLNLHKTFSTPHGGGGPGSGPVGVKEELAPFLP 298 (481)
T ss_pred -chHHHHHHHHHHHcCCEEEEEecCh-hhhcccC-Ccccc--CCCEEEEechhhcCCCCCCCCCCeeeeeehhhhHhhCC
Confidence 2239999999999999999999984 2222321 12223 3687765 388862 345677778887776653
Q ss_pred CCC-------------------ccCCCCCcHHHHHHHHHHHHHhcChHHHHH----------HHhCCCCcceecccc-ee
Q 013008 338 YGD-------------------HGSTFAGSPLVCNAAIAVLDKISNPAFLAS----------KLARNPHVKDVRGLG-LI 387 (451)
Q Consensus 338 ~~~-------------------~~~t~~~~~~~~aaa~aal~~~~~~~~~~~----------~~~~~~~~~~v~g~G-~~ 387 (451)
... ..-.++++.+.+.++...+..+..+++.+. +.+++..+..+.-.+ .+
T Consensus 299 ~~~v~~~g~~~~l~~~r~~~i~r~~a~t~~~l~~~~a~~~l~~~G~~Gl~~~a~~~~~~a~~l~~~L~~~~~~~~~~~~~ 378 (481)
T PRK04366 299 VPVVEKDGDRYRLDYDRPKSIGRVRAFYGNFGVLVRAYAYIRSLGAEGLREVSEDAVLNANYLKARLKDIYDLPYDRPCM 378 (481)
T ss_pred CCeeeccCCceeecccccccCCCcccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhCcccCCCCee
Confidence 110 011123344555555555555443433221 122211100111011 11
Q ss_pred --EEEEe------cCChHHHHHHHHHCCceeeecC----CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHhhcCC
Q 013008 388 --IGIEF------DVSATPVVDACRDSGLLVLTAG----KGNVVRLVPPLIISEQELDQAVEILCKTLPVLDSNSN 451 (451)
Q Consensus 388 --~~~~~------~~~~~~~~~~l~~~Gv~~~~~~----~~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~~~~~~ 451 (451)
+.+.+ +....++.++|.++|+.+.... ..+.+|+++...+|++|||++++.|.++.++++++|+
T Consensus 379 ~~~~~~~~~~~~~g~~~~~v~~~L~~~Gi~~~~~~~p~~~~~~l~is~~e~~t~edid~l~~~l~~i~~~~~~~~~ 454 (481)
T PRK04366 379 HEFVLSGKKLKETGVRTLDIAKRLLDYGFHPPTIYFPLIVPEALMIEPTETESKETLDAFIAAMKQIAEEAKENPE 454 (481)
T ss_pred EEEEEECccccccCCCHHHHHHHHHHCCccCCccccccccCCeEEEcccCCCCHHHHHHHHHHHHHHHHHHHhCcH
Confidence 12221 1356789999999999875221 1357999999999999999999999999999887764
No 297
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.65 E-value=2.2e-14 Score=144.93 Aligned_cols=162 Identities=20% Similarity=0.263 Sum_probs=118.6
Q ss_pred CCCCCHHHHHHHHHHhhccCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCC
Q 013008 135 NMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKE 214 (451)
Q Consensus 135 ~~~~~~~~~~l~~~l~~~~~~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~ 214 (451)
....++...+|++++++..+.+.+++++||++|+.++++++.. ++++||+..+.|++........
T Consensus 58 ~r~~~p~~~~le~~lA~l~g~~~al~~~SG~~Ai~~al~all~-----------pGd~VIv~~~~y~~t~~~~~~~---- 122 (427)
T PRK05994 58 TRITNPTNAVLEERVAALEGGTAALAVASGHAAQFLVFHTLLQ-----------PGDEFIAARKLYGGSINQFGHA---- 122 (427)
T ss_pred ECCCCccHHHHHHHHHHHhCCCcEEEEcCHHHHHHHHHHHHhC-----------CCCEEEEecCcchhHHHHHHHH----
Confidence 4445566789999999999988899999999999999987652 6899999999998753221100
Q ss_pred CcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCc
Q 013008 215 HYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGR 294 (451)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr 294 (451)
.......+.+++.+|++++++++.+ ++++|++|.+.++.|.+.+ +++|.++|++||+++|+|++++. +.
T Consensus 123 -----~~~~G~~v~~vd~~d~~~l~~ai~~-~tklV~vesp~NptG~v~d----l~~I~~la~~~gi~livD~a~a~-~~ 191 (427)
T PRK05994 123 -----FKSFGWQVRWADADDPASFERAITP-RTKAIFIESIANPGGTVTD----IAAIAEVAHRAGLPLIVDNTLAS-PY 191 (427)
T ss_pred -----HHhcCcEEEEECCCCHHHHHHhcCc-CCeEEEEECCCCCCCeecC----HHHHHHHHHHcCCEEEEECCccc-cc
Confidence 0011233456666789999999975 6788999988888887776 99999999999999999999852 11
Q ss_pred ccccccccccCCCcceee--ecccccC-Cccccccc
Q 013008 295 TGYLWAHEHYGIFPDIMT--LAKPLAG-GLPIGAAL 327 (451)
Q Consensus 295 ~G~~~~~~~~~~~pdi~t--~sK~lg~-G~~iG~v~ 327 (451)
.+......+|+++ ++|.++| |-.+|.++
T Consensus 192 -----~~~pl~~gaDivv~S~tK~lgg~~~~~gG~v 222 (427)
T PRK05994 192 -----LIRPIEHGADIVVHSLTKFLGGHGNSMGGII 222 (427)
T ss_pred -----cCCccccCCcEEEEcCccccCCCCCcEEEEE
Confidence 1222345678775 6799986 43444433
No 298
>PRK05939 hypothetical protein; Provisional
Probab=99.65 E-value=3.2e-14 Score=142.26 Aligned_cols=166 Identities=20% Similarity=0.188 Sum_probs=120.4
Q ss_pred cccCCCCCHHHHHHHHHHhhccCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhcc
Q 013008 132 HVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALT 211 (451)
Q Consensus 132 ~~~~~~~~~~~~~l~~~l~~~~~~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~ 211 (451)
+.+....++...+|+++|+++.+.+..+.++||+.|+..++..+. .++|+||+.++.|++.......+.
T Consensus 39 ~~Y~r~g~p~~~~lE~~la~leg~~~~v~~ssG~~Ai~~~l~all-----------~~Gd~Vv~~~~~y~~t~~~~~~l~ 107 (397)
T PRK05939 39 FTYARQGTPTTAALEAKITKMEGGVGTVCFATGMAAIAAVFLTLL-----------RAGDHLVSSQFLFGNTNSLFGTLR 107 (397)
T ss_pred CCcCCCCCHHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHHc-----------CCCCEEEECCCccccHHHHHHHHH
Confidence 334555677789999999999998778888899999999998654 168999999988865432111110
Q ss_pred CCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccC
Q 013008 212 SKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCG 291 (451)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg 291 (451)
.....+.+++..|++++++++.+ ++++|++|.+.++.|.+.+ +++|.++|++||+++|+|++|..
T Consensus 108 ----------~~G~~v~~v~~~d~e~l~~~l~~-~tklV~vesp~NptG~v~d----l~~I~~la~~~gi~livD~t~a~ 172 (397)
T PRK05939 108 ----------GLGVEVTMVDATDVQNVAAAIRP-NTRMVFVETIANPGTQVAD----LAGIGALCRERGLLYVVDNTMTS 172 (397)
T ss_pred ----------hcCCEEEEECCCCHHHHHHhCCC-CCeEEEEECCCCCCCCHHh----HHHHHHHHHHcCCEEEEECCccc
Confidence 11133556666799999999965 6788999988888887665 99999999999999999999842
Q ss_pred CCcccccccccccCCCccee--eecccccC-Cccccccccc
Q 013008 292 LGRTGYLWAHEHYGIFPDIM--TLAKPLAG-GLPIGAALVT 329 (451)
Q Consensus 292 ~gr~G~~~~~~~~~~~pdi~--t~sK~lg~-G~~iG~v~~~ 329 (451)
.. .+.......|++ +++|.++| |..+|+++..
T Consensus 173 ~~------~~~~~~~gaDivv~S~sK~~~g~g~~igg~v~~ 207 (397)
T PRK05939 173 PW------LFRPKDVGASLVINSLSKYIAGHGNALGGAVTD 207 (397)
T ss_pred cc------ccCccccCCEEEEecCeecccCCCCeEEEEEec
Confidence 11 111112235554 67899997 7777776653
No 299
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.65 E-value=2.2e-14 Score=144.77 Aligned_cols=164 Identities=20% Similarity=0.164 Sum_probs=118.9
Q ss_pred cCCCCCHHHHHHHHHHhhccCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCC
Q 013008 134 SNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK 213 (451)
Q Consensus 134 ~~~~~~~~~~~l~~~l~~~~~~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~ 213 (451)
+....++....|++.|+++.+.+..++++||+.|+..++..+. .++|+||+.++.|++.........
T Consensus 58 y~r~~~p~~~~Le~~lA~leg~~~al~~~sG~~Ai~~al~~ll-----------~~GD~Vlv~~~~y~~t~~~~~~~~-- 124 (431)
T PRK08248 58 YTRIMNPTTDVFEKRIAALEGGIGALAVSSGQAAITYSILNIA-----------SAGDEIVSSSSLYGGTYNLFAHTL-- 124 (431)
T ss_pred eECCCCchHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHh-----------CCCCEEEEccCchhhHHHHHHHHH--
Confidence 3445566688999999999998899999999999999998654 168999999999876542221110
Q ss_pred CCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCC
Q 013008 214 EHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLG 293 (451)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~g 293 (451)
......+.+++..|++++++++++ ++++|+++.+.++.|.+.+ +++|.++|++||+++|+|+++.. +
T Consensus 125 -------~~~Gv~v~~vd~~d~e~l~~ai~~-~tklV~l~sp~NPtG~v~d----i~~I~~la~~~gi~vIvD~t~a~-~ 191 (431)
T PRK08248 125 -------PKLGITVKFVDPSDPENFEAAITD-KTKALFAETIGNPKGDVLD----IEAVAAIAHEHGIPLIVDNTFAS-P 191 (431)
T ss_pred -------HhCCEEEEEECCCCHHHHHHhcCC-CCeEEEEECCCCCCCcccC----HHHHHHHHHHcCCEEEEeCCCCc-c
Confidence 011234556676799999999975 5778888877777787776 89999999999999999999852 1
Q ss_pred cccccccccccCCCccee--eecccccC-Ccccccccc
Q 013008 294 RTGYLWAHEHYGIFPDIM--TLAKPLAG-GLPIGAALV 328 (451)
Q Consensus 294 r~G~~~~~~~~~~~pdi~--t~sK~lg~-G~~iG~v~~ 328 (451)
.. ........|++ +++|.+++ |.++|++++
T Consensus 192 ~~-----~~pl~~gaDivv~S~tK~lgg~g~~~Gg~v~ 224 (431)
T PRK08248 192 YL-----LRPIEHGADIVVHSATKFIGGHGTSIGGVIV 224 (431)
T ss_pred cc-----CChhHcCCCEEEEcCccccCCCCCceEEEEE
Confidence 11 11112346666 56799986 667766654
No 300
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=99.65 E-value=8.6e-14 Score=126.86 Aligned_cols=288 Identities=17% Similarity=0.153 Sum_probs=176.2
Q ss_pred HHHHHHHHHHhhccC----CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCC
Q 013008 140 IPQIELAKRLVACSF----ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEH 215 (451)
Q Consensus 140 ~~~~~l~~~l~~~~~----~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~ 215 (451)
.....|+..+.+.++ .+.+.+||+...|...++.+.-.++. .+ ..+.-++-..|-|-|+....+.-.
T Consensus 78 ~li~ala~~l~~~ygwnit~~NIalTnGSQs~fFYlfNlF~G~~s--dG---~~k~illPLaPeYiGY~d~~l~~d---- 148 (417)
T COG3977 78 VLIDALAKMLRREYGWNITAQNIALTNGSQSAFFYLFNLFAGRRS--DG---TEKKILLPLAPEYIGYADAGLEED---- 148 (417)
T ss_pred HHHHHHHHHHHHHhCCCCccceeeecCCccchHHHHHHHhcCccC--CC---cceeEeeccChhhccccccccCcc----
Confidence 336677777888776 67899999998888777774432221 01 122333445888888865433211
Q ss_pred cCCCCcCCCCCee------EeeCCCHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccc
Q 013008 216 YRSPFEPVMPGVN------FVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQ 289 (451)
Q Consensus 216 ~~~~~~~~~~~~~------~~~~~d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~ 289 (451)
.|....|.+. +--+.|.++|+- .+++.+|++.-..+++|. +.+++++.+|-.|+++||++||.|.+|
T Consensus 149 ---~fVs~kP~iel~~~g~FKY~vDF~~l~i---~e~~g~ic~SRPtNPTGN-VlTdeE~~kldalA~~~giPliIDnAY 221 (417)
T COG3977 149 ---LFVSAKPNIELLPAGQFKYHVDFEHLHI---GESTGAICVSRPTNPTGN-VLTDEELAKLDALARQHGIPLIIDNAY 221 (417)
T ss_pred ---ceeeccCCcccccccceeeccCHHHccc---ccccceEEecCCCCCCCC-cccHHHHHHHHHHhhhcCCcEEEeccc
Confidence 1111222221 111236666642 346888888866666664 569999999999999999999999998
Q ss_pred cCCCcccccccccccCCCccee---eecccccCCcccccccccHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChH
Q 013008 290 CGLGRTGYLWAHEHYGIFPDIM---TLAKPLAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPA 366 (451)
Q Consensus 290 tg~gr~G~~~~~~~~~~~pdi~---t~sK~lg~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~ 366 (451)
. .-..+--|.-...-..++++ ++||.=-.|.|+|.++++++++..+......-+.+...++.|.+...++ +.+
T Consensus 222 g-~PFP~iifsd~~~~w~~NiilC~SLSK~GLPG~R~GIiIane~viqaitnmn~iisLap~~~G~Aia~~mie---~gd 297 (417)
T COG3977 222 G-VPFPGIIFSDATPLWNENIILCMSLSKLGLPGSRCGIIIANEKVIQAITNMNGIISLAPGRMGPAIAAEMIE---SGD 297 (417)
T ss_pred C-CCCCceecccccccCCCCEEEEeehhhcCCCCcceeEEEccHHHHHHHHhccceeeecCCCccHHHHHHHhh---cch
Confidence 3 32333322211112234443 4556433589999999999999988643222222333344444444443 211
Q ss_pred HH-----------HH--------HHhCCCC--cceeccccee-EEEEe---cCChHHHHHHHHHCCceeeecCC------
Q 013008 367 FL-----------AS--------KLARNPH--VKDVRGLGLI-IGIEF---DVSATPVVDACRDSGLLVLTAGK------ 415 (451)
Q Consensus 367 ~~-----------~~--------~~~~~~~--~~~v~g~G~~-~~~~~---~~~~~~~~~~l~~~Gv~~~~~~~------ 415 (451)
++ .+ +.+.+|. ..--+++|.+ +|+-| ......+.++|.++||++.|+..
T Consensus 298 l~rlseqVIrPFY~~~~q~~~~~l~~~lp~~~~~iHkpEGAIFlWLWf~dLPItt~~LYq~LKa~Gvl~VPG~~FFpGl~ 377 (417)
T COG3977 298 LLRLSEQVIRPFYRNRVQTTIAILRRYLPEYRCLIHKPEGAIFLWLWFKDLPITTEELYQRLKARGVLMVPGHYFFPGLD 377 (417)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHHHhcCccceeeecCCcceeehhhhccCCCCHHHHHHHHHhCeEEEecccccCCCCC
Confidence 11 11 2233441 1113566654 44444 35678999999999999998741
Q ss_pred ------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHhhc
Q 013008 416 ------GNVVRLVPPLIISEQELDQAVEILCKTLPVLDSN 449 (451)
Q Consensus 416 ------~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~~~~ 449 (451)
...+|+ +++-.++.|+..+++|.+.+++.-++
T Consensus 378 ~ewpH~hqC~Rm--n~~~~~~~ie~Gva~lae~ve~~yq~ 415 (417)
T COG3977 378 KEWPHTHQCMRM--NYVPEPEKIEKGVAILAEEVERAYQE 415 (417)
T ss_pred CCCCCccceEEE--ecCCCHHHHHHHHHHHHHHHHHHHhc
Confidence 235666 78889999999999999999887654
No 301
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.65 E-value=2.2e-14 Score=143.81 Aligned_cols=173 Identities=12% Similarity=0.076 Sum_probs=119.4
Q ss_pred CCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHhhccCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEE
Q 013008 115 GDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFV 194 (451)
Q Consensus 115 ~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii 194 (451)
...+-.+++.+.... ++.+....++...+|++.++++.+.+.++.++||+.|+.+++..+. .++|+||
T Consensus 37 ~~~~~~~~~~~~~~~-g~~ysR~~nPtv~~lE~~la~leg~~~av~~~SG~aAi~~al~all-----------~~GD~VI 104 (432)
T PRK06702 37 DTSDDLAALFNLEAE-GYIYTRIGNPTLAAFEQKLAELEGGVGAVATASGQAAIMLAVLNIC-----------SSGDHLL 104 (432)
T ss_pred CCHHHHHHHHhcccc-CceeECCCCcHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHhc-----------CCCCEEE
Confidence 334444444433322 2223333466688999999999998889999999999999998654 1689999
Q ss_pred EEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCC-CHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHH
Q 013008 195 SFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYG-NIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLR 273 (451)
Q Consensus 195 ~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~ 273 (451)
+..++|.+........- ......+.+++.+ |++.++++|.+ ++++|++|...++.+.++. +++|+
T Consensus 105 ~~~~~Y~~T~~~~~~~l---------~~~Gi~v~~vd~~~d~~~l~~~I~~-~Tk~I~~e~pgnP~~~v~D----i~~I~ 170 (432)
T PRK06702 105 CSSTVYGGTFNLFGVSL---------RKLGIDVTFFNPNLTADEIVALAND-KTKLVYAESLGNPAMNVLN----FKEFS 170 (432)
T ss_pred ECCCchHHHHHHHHHHH---------HHCCCEEEEECCCCCHHHHHHhCCc-CCeEEEEEcCCCccccccC----HHHHH
Confidence 99999976543211100 0112345566664 89999999975 5778888886555565555 99999
Q ss_pred HHHHHhCCEEEEeccccCCCcccccccccccCCCccee--eecccccC
Q 013008 274 DACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIM--TLAKPLAG 319 (451)
Q Consensus 274 ~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~--t~sK~lg~ 319 (451)
++|++||+++|+|+++. .+..+.-+....||+ +++|.++|
T Consensus 171 ~iA~~~gi~livD~T~~------tP~~~~pl~~GADIvv~S~TKy~~G 212 (432)
T PRK06702 171 DAAKELEVPFIVDNTLA------TPYLCQAFEHGANIIVHSTTKYIDG 212 (432)
T ss_pred HHHHHcCCEEEEECCCC------chhhCChhhcCCCEEEEccccccCC
Confidence 99999999999999973 122333334456665 67898886
No 302
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.64 E-value=6e-14 Score=143.22 Aligned_cols=318 Identities=15% Similarity=0.136 Sum_probs=175.9
Q ss_pred EEEeeccCcccccCCCCCHHHHHHHHHHHhh-c--ccccCCC--CCHHHHHH----HHHHhhccC--CCeEEec---CCH
Q 013008 99 EYLDLSSGIAVNALGHGDADWIKAVVDQANV-L--THVSNMY--YSIPQIEL----AKRLVACSF--ADRVFFS---NTG 164 (451)
Q Consensus 99 ~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~-~--~~~~~~~--~~~~~~~l----~~~l~~~~~--~e~v~~~---~sG 164 (451)
+.|.+..+-. ...|.+++++...+.+ + ++.+..+ ......++ .+++++.++ .+.+.++ +||
T Consensus 35 ~~l~l~~sen-----~~s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~~~~iE~~ar~~~a~lf~a~~~~~~~~~~~~sg 109 (452)
T PTZ00094 35 EGLELIASEN-----FTSRAVLECLGSCFTNKYAEGLPGNRYYGGNEVVDKIENLCQKRALEAFGLDPEEWGVNVQPYSG 109 (452)
T ss_pred cCeeEecccc-----cCCHHHHHHhcchhhccccCCCCCccccccchHHHHHHHHHHHHHHHHhCCCcccceeecCCCch
Confidence 4555554433 3578899998887753 3 1111111 12222333 346677776 3455555 789
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCC-----CHHHHH
Q 013008 165 TEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYG-----NIEATR 239 (451)
Q Consensus 165 ~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~le 239 (451)
++||..++..+. + ++++||+. ..-||.............. ......-.+..++++ |+++|+
T Consensus 110 t~an~~v~~al~---~--------~gd~Ii~~-~~ehg~~l~~~~~l~~~~~--~~~~~~~~~~~~~~~~~g~id~~~L~ 175 (452)
T PTZ00094 110 SPANFAVYTALL---Q--------PHDRIMGL-DLPSGGHLTHGFYTAKKKV--SATSIYFESLPYQVNEKGLIDYDKLE 175 (452)
T ss_pred HHHHHHHHHHhc---C--------CCCEEEec-ccccCCccccccccccccc--ccceeeeeeeecccCCCCCcCHHHHH
Confidence 999999998664 1 57777775 4446554332110000000 000000001112222 899999
Q ss_pred HhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccccccCCCcceeeec--ccc
Q 013008 240 KLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLA--KPL 317 (451)
Q Consensus 240 ~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~t~s--K~l 317 (451)
++++..+.+.|++. .++.|...+ +++|.++|+++|+++++|++|+ +|..+......... ..|++++| |+|
T Consensus 176 ~~l~~~~~~lvi~~--~s~~g~~~d----i~~I~~i~~~~ga~l~vDaaq~-~G~i~~~~~~~~~~-~~D~l~~S~hK~l 247 (452)
T PTZ00094 176 ELAKAFRPKLIIAG--ASAYPRDID----YKRFREICDSVGAYLMADIAHT-SGLVAAGVLPSPFP-YADVVTTTTHKSL 247 (452)
T ss_pred HHHHHhCCCEEEEe--CCCCCCccC----HHHHHHHHHHcCCEEEEeccch-hccccCCCCCCCCC-CCcEEEcCCccCC
Confidence 99963334455552 234556666 9999999999999999999995 55443211111111 47887665 988
Q ss_pred cCCcccccccccHHHHhhc----cCCCccCCC--CCcHHHHHHHHHHHHHhcChH---HHHH-------HHhCC--CCcc
Q 013008 318 AGGLPIGAALVTEKVASAI----NYGDHGSTF--AGSPLVCNAAIAVLDKISNPA---FLAS-------KLARN--PHVK 379 (451)
Q Consensus 318 g~G~~iG~v~~~~~i~~~~----~~~~~~~t~--~~~~~~~aaa~aal~~~~~~~---~~~~-------~~~~~--~~~~ 379 (451)
.|.. .|++++++++.+.+ ..... ..+ +.++...++..++++.+...+ +.++ +.+.+ ..+.
T Consensus 248 ~GP~-Gg~l~~~~~~~~~l~~~~~~~~~-p~~~G~~~~~~iaal~~al~~~~~~~~~~~~~~i~~l~~~l~~~L~~~g~~ 325 (452)
T PTZ00094 248 RGPR-SGLIFYRKKVKPDIENKINEAVF-PGLQGGPHNHQIAAIAVQLKEVQSPEWKEYAKQVLKNAKALAAALEKRGYD 325 (452)
T ss_pred CCCC-ceEEEEecccchHHHHhhccccC-CCCCCCchHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhCCcE
Confidence 6533 36676666544322 11111 112 346677777888888874432 2222 21111 0111
Q ss_pred eec-c-cceeEEEEec---CChHHHHHHHHHCCceeeec----C----CCCEEEEeCCCCC----CHHHHHHHHHHHHHH
Q 013008 380 DVR-G-LGLIIGIEFD---VSATPVVDACRDSGLLVLTA----G----KGNVVRLVPPLII----SEQELDQAVEILCKT 442 (451)
Q Consensus 380 ~v~-g-~G~~~~~~~~---~~~~~~~~~l~~~Gv~~~~~----~----~~~~iri~~~~~~----t~e~i~~~l~~l~~~ 442 (451)
... + ......+.+. .....+...|.++||.+... . .++.+|++++..+ +++|++++++.|.++
T Consensus 326 v~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~vs~~~~p~~~~~~~~~~vRis~~~~tt~g~~~~di~~l~~~l~~~ 405 (452)
T PTZ00094 326 LVTGGTDNHLVLVDLRPFGITGSKMEKLLDAVNISVNKNTIPGDKSALNPSGVRLGTPALTTRGAKEKDFKFVADFLDRA 405 (452)
T ss_pred EecCCCCCceEeecCCcCCCCHHHHHHHHHHCCcEEecccCCCCCcCCCCCeEEECCHHHHhCCCCHHHHHHHHHHHHHH
Confidence 111 1 1122333442 24566777776789998522 1 1357999995554 499999999999998
Q ss_pred HHH
Q 013008 443 LPV 445 (451)
Q Consensus 443 l~~ 445 (451)
+..
T Consensus 406 ~~~ 408 (452)
T PTZ00094 406 VKL 408 (452)
T ss_pred HHH
Confidence 874
No 303
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.64 E-value=1e-13 Score=138.36 Aligned_cols=293 Identities=13% Similarity=0.103 Sum_probs=175.2
Q ss_pred HHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHhhccCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEE
Q 013008 117 ADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSF 196 (451)
Q Consensus 117 p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~ 196 (451)
++-.+++.+.++.... ....+...++++++++.++.+++++++||++|+..+++++. . .++++||+.
T Consensus 11 ~~~~~~~~~~l~~~~~---~g~~~~~~~~e~~la~~~g~~~~v~~~sgt~al~~~l~~~~--~--------~~Gd~Viv~ 77 (375)
T PRK11706 11 GTELDYIQQAMSSGKL---CGDGGFTRRCQQWLEQRFGSAKVLLTPSCTAALEMAALLLD--I--------QPGDEVIMP 77 (375)
T ss_pred HHHHHHHHHHHHcCCc---cCCCHHHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHhC--C--------CCCCEEEEC
Confidence 3345667776654321 11234578899999999999999999999999998887542 1 168999999
Q ss_pred cCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHH
Q 013008 197 TNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDAC 276 (451)
Q Consensus 197 ~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~ 276 (451)
.++|..........+....+ .+..++.. ..|++++++.+.+ ++++|++. + ..|...+ +++|.++|
T Consensus 78 ~~t~~~~~~~~~~~G~~~v~----~d~d~~~~---~~d~~~le~~i~~-~tk~i~~~--~-~~G~~~~----~~~i~~la 142 (375)
T PRK11706 78 SYTFVSTANAFVLRGAKIVF----VDIRPDTM---NIDETLIEAAITP-KTRAIVPV--H-YAGVACE----MDTIMALA 142 (375)
T ss_pred CCCcHHHHHHHHHcCCEEEE----EecCCCcC---CcCHHHHHHhcCC-CCeEEEEe--C-CCCCccC----HHHHHHHH
Confidence 99998665433322221111 11111110 1278999999975 45666643 2 3454444 89999999
Q ss_pred HHhCCEEEEeccccCCCc--ccccccccccCCCcceeeec----ccccCCcccccccccHHHHhhccCCC----------
Q 013008 277 DDAGALLVFDEVQCGLGR--TGYLWAHEHYGIFPDIMTLA----KPLAGGLPIGAALVTEKVASAINYGD---------- 340 (451)
Q Consensus 277 ~~~g~llI~DEv~tg~gr--~G~~~~~~~~~~~pdi~t~s----K~lg~G~~iG~v~~~~~i~~~~~~~~---------- 340 (451)
++||+++|.|++|+ +|. .|.. .+---|+.+|| |.++.|.+.++++.++++.+.++...
T Consensus 143 ~~~~i~vIeD~a~a-~g~~~~~~~-----~g~~~~~~~~Sf~~~K~l~~g~gG~~~~~~~~~~~~~~~~~~~g~~~~~~~ 216 (375)
T PRK11706 143 KKHNLFVVEDAAQG-VMSTYKGRA-----LGTIGHIGCFSFHETKNYTAGEGGALLINDPALIERAEIIREKGTNRSQFF 216 (375)
T ss_pred HHcCCEEEEECccc-cccccCCee-----eecCcCEEEEeCCCCccccccCCeEEEECCHHHHHHHHHHHHcCCCcchhh
Confidence 99999999999996 432 1221 12224777888 99987666667777788776543210
Q ss_pred -----------ccCCCCCcHHHHHHHHHHHHHhcChH-----HHHH---HHhCCC---Ccce--ecc----cceeEEEEe
Q 013008 341 -----------HGSTFAGSPLVCNAAIAVLDKISNPA-----FLAS---KLARNP---HVKD--VRG----LGLIIGIEF 392 (451)
Q Consensus 341 -----------~~~t~~~~~~~~aaa~aal~~~~~~~-----~~~~---~~~~~~---~~~~--v~g----~G~~~~~~~ 392 (451)
.+.++-.+.+.++.+++-|+.++... ..+. .+++++ .+.. ..+ ...++++.+
T Consensus 217 ~~~~~~~~~~~~g~~~~~~~~~aa~~~~ql~~l~~~~~~R~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (375)
T PRK11706 217 RGQVDKYTWVDIGSSYLPSELQAAYLWAQLEAADRINQRRLALWQRYYDALAPLAEAGRIELPSIPDDCKHNAHMFYIKL 296 (375)
T ss_pred ccCCCcceeeecccccCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCeeecCCCCCCCceeeEEEEEEE
Confidence 01222234555666666666543211 1111 233433 1110 111 122344444
Q ss_pred c--CChHHHHHHHHHCCceeeec----C-------------C--------CCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 013008 393 D--VSATPVVDACRDSGLLVLTA----G-------------K--------GNVVRLVPPLIISEQELDQAVEILCKTL 443 (451)
Q Consensus 393 ~--~~~~~~~~~l~~~Gv~~~~~----~-------------~--------~~~iri~~~~~~t~e~i~~~l~~l~~~l 443 (451)
. ....++.+.|.++||.+... . . .+.+.+-.....+++|++.+++.|++++
T Consensus 297 ~~~~~r~~l~~~L~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~~~~~i~~~i~~~~ 374 (375)
T PRK11706 297 RDLEDRSALINFLKEAGIMAVFHYIPLHSSPAGERFGRFHGEDRYTTKESERLLRLPLFYNLTDVEQRTVIDTILEFF 374 (375)
T ss_pred CCcCCHHHHHHHHHHCCCCccccCCccCcchhhHhcCCCCCCChHHHHHHhCcEeccCCCCCCHHHHHHHHHHHHHHh
Confidence 3 35678999999999975411 0 0 1224443344578999999999998764
No 304
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.63 E-value=9.5e-14 Score=138.65 Aligned_cols=291 Identities=15% Similarity=0.144 Sum_probs=172.7
Q ss_pred HHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHhhccCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEE
Q 013008 117 ADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSF 196 (451)
Q Consensus 117 p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~ 196 (451)
++-.+++.+.++.... +..+...+|+++++++++.+.+++++||++|+..+++++. . .++|+||+.
T Consensus 14 ~~e~~~~~~~l~~~~~----~~g~~~~~le~~la~~~g~~~~v~~~sgt~al~lal~al~--~--------~~Gd~Viv~ 79 (379)
T PRK11658 14 DEELAAVKEVLRSGWI----TTGPKNQALEQAFCQLTGNQHAIAVSSATAGMHITLMALG--I--------GPGDEVITP 79 (379)
T ss_pred HHHHHHHHHHHHcCCc----cCCHhHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHcC--C--------CCCCEEEEC
Confidence 4557777777765321 2344578999999999998889999999999999998652 1 168999999
Q ss_pred cCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHH
Q 013008 197 TNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDAC 276 (451)
Q Consensus 197 ~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~ 276 (451)
+++|.+........+....+ .+..++.. .-|++++++.+.+ ++++|+ |++. .|...+ +++|.++|
T Consensus 80 ~~~~~~~~~~~~~~G~~~v~----vd~~~~~~---~~d~~~l~~~i~~-~tkav~--~~~~-~G~~~d----~~~i~~~a 144 (379)
T PRK11658 80 SLTWVSTLNMIVLLGATPVM----VDVDRDTL---MVTPEAIEAAITP-RTKAII--PVHY-AGAPAD----LDAIRAIG 144 (379)
T ss_pred CCcHHHHHHHHHHcCCEEEE----EecCCCcC---CcCHHHHHHhccc-CCeEEE--EeCC-CCCcCC----HHHHHHHH
Confidence 99997764333222211110 11111110 0278999999975 466665 3333 454444 89999999
Q ss_pred HHhCCEEEEecccc-CCCcccccccccccCCCcceeeec--ccccCCccccccccc-HHHHhhccCCC-c----------
Q 013008 277 DDAGALLVFDEVQC-GLGRTGYLWAHEHYGIFPDIMTLA--KPLAGGLPIGAALVT-EKVASAINYGD-H---------- 341 (451)
Q Consensus 277 ~~~g~llI~DEv~t-g~gr~G~~~~~~~~~~~pdi~t~s--K~lg~G~~iG~v~~~-~~i~~~~~~~~-~---------- 341 (451)
++||+++|+|++|+ |.-..|.. ....+ .++.+|+ |.+++| +.|+++.+ +++.+.++... +
T Consensus 145 ~~~gi~vi~D~a~a~g~~~~~~~--~g~~g--~~~~Sf~~~K~l~~g-~GG~v~~~~~~~~~~~~~~~~~G~~~~~~~~~ 219 (379)
T PRK11658 145 ERYGIPVIEDAAHAVGTYYKGRH--IGARG--TAIFSFHAIKNITCA-EGGLVVTDDDELADRLRSLKFHGLGVDAFDRQ 219 (379)
T ss_pred HHcCCeEEEECCCccCCeECCee--cCCCC--CEEEeCCCCCcCccc-CceEEEECCHHHHHHHHHHHHcCCCcchhhhh
Confidence 99999999999996 32222221 12233 3667776 666544 66777764 67766553210 0
Q ss_pred -------------cCCCCCcHHHHHHHHHHHHHhcChHHHHH----------HHhCCCCcceec-c---cc--eeEEEEe
Q 013008 342 -------------GSTFAGSPLVCNAAIAVLDKISNPAFLAS----------KLARNPHVKDVR-G---LG--LIIGIEF 392 (451)
Q Consensus 342 -------------~~t~~~~~~~~aaa~aal~~~~~~~~~~~----------~~~~~~~~~~v~-g---~G--~~~~~~~ 392 (451)
+..+..+.+.++.++..++.+++ +.++ .++.++...... . .. .++.+.+
T Consensus 220 ~~~~~~~~~~~~~G~n~~~~~l~AAl~~~ql~~l~~--~~~~r~~~a~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (379)
T PRK11658 220 TQGRAPQAEVLTPGYKYNLADINAAIALVQLAKLEA--LNARRREIAARYLQALADLPFQPLSLPAWPHQHAWHLFIIRV 297 (379)
T ss_pred cccCCCcceeeccccccCcCHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHhcCCCCccCcCCCCCCceeEEEEEEEE
Confidence 11122344555556565654432 1111 233444211111 1 11 1222333
Q ss_pred c-----CChHHHHHHHHHCCceeee----cC------------C--------CCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 013008 393 D-----VSATPVVDACRDSGLLVLT----AG------------K--------GNVVRLVPPLIISEQELDQAVEILCKTL 443 (451)
Q Consensus 393 ~-----~~~~~~~~~l~~~Gv~~~~----~~------------~--------~~~iri~~~~~~t~e~i~~~l~~l~~~l 443 (451)
+ ....++.+.|.++||-+.. .. . ...+.+-.....|+|+++++++.|++++
T Consensus 298 ~~~~~~~~r~~~~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lP~~~~l~~~~~~~i~~~i~~~~ 377 (379)
T PRK11658 298 DEERCGISRDALMEALKERGIGTGLHFRAAHTQKYYRERFPTLSLPNTEWNSERICSLPLFPDMTDADVDRVITALQQIA 377 (379)
T ss_pred CCccccCCHHHHHHHHHHCCCCCcccCcCcccChhhhccCCCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHHH
Confidence 2 2467899999999986541 10 0 1234444455689999999999999875
No 305
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.63 E-value=6.8e-14 Score=141.05 Aligned_cols=163 Identities=20% Similarity=0.153 Sum_probs=114.6
Q ss_pred CCCCCHHHHHHHHHHhhccCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCC
Q 013008 135 NMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKE 214 (451)
Q Consensus 135 ~~~~~~~~~~l~~~l~~~~~~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~ 214 (451)
....++...+|+++|+++.+.+.+++++||+.|+..++..+.. ++++||+....|.+.........
T Consensus 64 sr~~~p~~~~Le~~lA~l~g~~~av~~sSG~aAi~~al~all~-----------~Gd~Vv~~~~~y~~t~~~~~~~l--- 129 (436)
T PRK07812 64 TRIMNPTQDVVEQRIAALEGGVAALLLASGQAAETFAILNLAG-----------AGDHIVSSPRLYGGTYNLFHYTL--- 129 (436)
T ss_pred cCCCCchHHHHHHHHHHHhCCCeEEEEccHHHHHHHHHHHHhC-----------CCCEEEEeCCcchHHHHHHHHHh---
Confidence 3445666889999999999988899999999999999976541 68899999887755432111100
Q ss_pred CcCCCCcCCCCCeeEee-CCCHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCC
Q 013008 215 HYRSPFEPVMPGVNFVE-YGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLG 293 (451)
Q Consensus 215 ~~~~~~~~~~~~~~~~~-~~d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~g 293 (451)
......+.+++ ..|++++++++++ ++++|++|.+.++.|.+.+ +++|.++|++||+++|+|+++.. +
T Consensus 130 ------~~~Gi~v~~vdd~~d~e~l~~ai~~-~tklV~ie~~sNp~G~v~D----l~~I~~la~~~gi~liVD~t~a~-~ 197 (436)
T PRK07812 130 ------PKLGIEVSFVEDPDDLDAWRAAVRP-NTKAFFAETISNPQIDVLD----IPGVAEVAHEAGVPLIVDNTIAT-P 197 (436)
T ss_pred ------hcCeEEEEEECCCCCHHHHHHhCCC-CCeEEEEECCCCCCCeecC----HHHHHHHHHHcCCEEEEECCCcc-c
Confidence 00112233442 3589999998874 6789999999888898888 99999999999999999999852 1
Q ss_pred cccccccccccCCCccee--eecccccC-C-cccccccc
Q 013008 294 RTGYLWAHEHYGIFPDIM--TLAKPLAG-G-LPIGAALV 328 (451)
Q Consensus 294 r~G~~~~~~~~~~~pdi~--t~sK~lg~-G-~~iG~v~~ 328 (451)
... .......|++ +++|.++| | .-.|.++.
T Consensus 198 ~~~-----~pl~~GaDivv~S~tK~lgg~G~~i~G~vv~ 231 (436)
T PRK07812 198 YLI-----RPLEHGADIVVHSATKYLGGHGTAIAGVIVD 231 (436)
T ss_pred ccC-----CchhcCCCEEEEecccccCCCCCeEEEEEEc
Confidence 111 1122346665 56799985 5 33444443
No 306
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.62 E-value=9.1e-14 Score=140.28 Aligned_cols=161 Identities=19% Similarity=0.166 Sum_probs=116.1
Q ss_pred cCCCCCHHHHHHHHHHhhccCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCC
Q 013008 134 SNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK 213 (451)
Q Consensus 134 ~~~~~~~~~~~l~~~l~~~~~~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~ 213 (451)
+....++...+|+++++++.+.+.+++++||++|+..++..+.. ++|+||+....|++.........
T Consensus 58 y~R~~~p~~~~le~~lA~l~g~~~av~~sSGt~Al~~al~~ll~-----------~Gd~Vi~~~~~y~~t~~~~~~~l-- 124 (433)
T PRK08134 58 YSRISNPTVAVLEERVAALEGGVGAIATASGQAALHLAIATLMG-----------AGSHIVASSALYGGSHNLLHYTL-- 124 (433)
T ss_pred eecCcChHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHHhC-----------CCCEEEEeCCccHHHHHHHHHHH--
Confidence 34456667899999999999977789999999999999986541 58899999888876432211100
Q ss_pred CCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCC
Q 013008 214 EHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLG 293 (451)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~g 293 (451)
......+.+++.+|+++++++|.+ ++++|++|.+.++.|.+.+ +++|.++|++||+++|+|.++.. +
T Consensus 125 -------~~~Gi~v~~vd~~d~~~l~~~i~~-~TklV~~e~~~np~g~v~D----i~~I~~la~~~gi~livD~t~a~-~ 191 (433)
T PRK08134 125 -------RRFGIETTFVKPGDIDGWRAAIRP-NTRLLFGETLGNPGLEVLD----IPTVAAIAHEAGVPLLVDSTFTT-P 191 (433)
T ss_pred -------hhCCeEEEEECCCCHHHHHHhcCC-CCeEEEEECCCcccCcccC----HHHHHHHHHHcCCEEEEECCCcc-c
Confidence 011234556666789999999975 6788899988777787777 99999999999999999999842 1
Q ss_pred cccccccccccCCCcceeeec--ccccC-Cccccc
Q 013008 294 RTGYLWAHEHYGIFPDIMTLA--KPLAG-GLPIGA 325 (451)
Q Consensus 294 r~G~~~~~~~~~~~pdi~t~s--K~lg~-G~~iG~ 325 (451)
.. ........|++++| |.++| |-.+|.
T Consensus 192 ~~-----~~pl~~GaD~vv~S~tK~l~g~g~~~gG 221 (433)
T PRK08134 192 YL-----LRPFEHGADLVYHSATKFLGGHGTAIGG 221 (433)
T ss_pred cc-----CCchhcCCCEEEeccccccCCCCCceEE
Confidence 11 11123456777654 98875 533333
No 307
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.62 E-value=6.8e-15 Score=138.16 Aligned_cols=186 Identities=20% Similarity=0.182 Sum_probs=138.7
Q ss_pred CCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHhhccCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCc
Q 013008 112 LGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPAT 191 (451)
Q Consensus 112 lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~ 191 (451)
+.+.+++=..++- +++..++.+....++....|+++++.+.+.-..+.+.||..|+..|+..+.. ++|
T Consensus 35 y~F~d~~haa~lF-~l~~~G~iYsRi~NPT~~vlE~RiAaLEGG~aa~a~aSG~AA~~~ai~~la~-----------aGD 102 (426)
T COG2873 35 YVFDDTDHAAALF-GLKEPGNIYTRIMNPTTDVLEERIAALEGGVAALAVASGQAAITYAILNLAG-----------AGD 102 (426)
T ss_pred eecCCHHHHHHHh-CCCcCCceeeeccCchHHHHHHHHHHhhcchhhhhhccchHHHHHHHHHhcc-----------CCC
Confidence 3445554333222 3455566666777888899999999998866777889999999999986652 699
Q ss_pred eEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHH
Q 013008 192 EFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQF 271 (451)
Q Consensus 192 ~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~ 271 (451)
.||.....|-|.... ...+ +..+.-.+.+++.+|++.++++|++ ++++|++|.+-++.+.++. ++.
T Consensus 103 ~iVss~~LYGGT~~l-f~~t--------l~~~Gi~v~fvd~~d~~~~~~aI~~-nTkavf~EtigNP~~~v~D----ie~ 168 (426)
T COG2873 103 NIVSSSKLYGGTYNL-FSHT--------LKRLGIEVRFVDPDDPENFEAAIDE-NTKAVFAETIGNPGLDVLD----IEA 168 (426)
T ss_pred eeEeeccccCchHHH-HHHH--------HHhcCcEEEEeCCCCHHHHHHHhCc-ccceEEEEeccCCCccccC----HHH
Confidence 999999999665422 2211 2233456788888899999999975 7899999999888888777 999
Q ss_pred HHHHHHHhCCEEEEeccccCCCcccccccccccCCCccee--eecccccC-Cccccccccc
Q 013008 272 LRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIM--TLAKPLAG-GLPIGAALVT 329 (451)
Q Consensus 272 l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~--t~sK~lg~-G~~iG~v~~~ 329 (451)
|.++|++||+++|+|...+.- +.+.-+....||+ +++|.+|| |-.+|.++..
T Consensus 169 ia~iAh~~gvpliVDNT~atp------yl~rP~~hGADIVvHS~TK~igGhGt~iGG~iVD 223 (426)
T COG2873 169 IAEIAHRHGVPLIVDNTFATP------YLCRPIEHGADIVVHSATKYIGGHGTAIGGVIVD 223 (426)
T ss_pred HHHHHHHcCCcEEEecCCCcc------eecchhhcCCCEEEEeecccccCCccccceEEEe
Confidence 999999999999999987521 2333344567887 56799997 7777777654
No 308
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.62 E-value=8.2e-14 Score=138.68 Aligned_cols=194 Identities=15% Similarity=0.135 Sum_probs=127.4
Q ss_pred cCCCCCHHHHHHHHHHhhccCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCC
Q 013008 134 SNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK 213 (451)
Q Consensus 134 ~~~~~~~~~~~l~~~l~~~~~~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~ 213 (451)
+..+.++...+|+++|+++.+.+..++++||+.|+..++.++. ++|+||+.++.|.+..........
T Consensus 44 y~r~~~p~~~~Le~~lA~l~g~~~~~~~~sG~aai~~~~~~l~------------~Gd~Viv~~~~y~~~~~~~~~~~~- 110 (377)
T PRK07671 44 YSRTGNPTRAALEELIAVLEGGHAGFAFGSGMAAITAVMMLFS------------SGDHVILTDDVYGGTYRVMTKVLN- 110 (377)
T ss_pred cCCCCChHHHHHHHHHHHHhCCCceEEeCCHHHHHHHHHHHhC------------CCCEEEECCCccchHHHHHHHHHh-
Confidence 3456677789999999999987778889999988876654322 689999999998755322111100
Q ss_pred CCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCC
Q 013008 214 EHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLG 293 (451)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~g 293 (451)
.....+.+++..|++++++++++ ++++|++|..+++.|...+ +++|.++|+++|+++|+||+|...
T Consensus 111 --------~~G~~v~~v~~~d~~~l~~ai~~-~tklV~le~P~NPtg~~~d----l~~I~~la~~~g~~lvvD~a~~~~- 176 (377)
T PRK07671 111 --------RFGIEHTFVDTSNLEEVEEAIRP-NTKAIYVETPTNPLLKITD----IKKISTIAKEKGLLTIVDNTFMTP- 176 (377)
T ss_pred --------cCCeEEEEECCCCHHHHHHhcCC-CCeEEEEECCCCCCCcccC----HHHHHHHHHHcCCEEEEECCCCcc-
Confidence 01123445566689999999975 5678888877667776665 999999999999999999998532
Q ss_pred cccccccccccCCCccee--eecccccC-C-cccccccc-cHHHHhhccCCCccCCCCCcHHHHHHHHHHH
Q 013008 294 RTGYLWAHEHYGIFPDIM--TLAKPLAG-G-LPIGAALV-TEKVASAINYGDHGSTFAGSPLVCNAAIAVL 359 (451)
Q Consensus 294 r~G~~~~~~~~~~~pdi~--t~sK~lg~-G-~~iG~v~~-~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal 359 (451)
..+.. .....|++ +++|.++| + .-.|++++ ++++++.+........-..+|..+..++..+
T Consensus 177 ~~~~p-----~~~g~Divv~S~sK~l~G~~~~~~G~~v~~~~~l~~~~~~~~~~~g~~~~~~~a~l~~~~l 242 (377)
T PRK07671 177 YWQSP-----ISLGADIVLHSATKYLGGHSDVVAGLVVVNSPELAEDLHFVQNSTGGILGPQDSWLLLRGL 242 (377)
T ss_pred ccCCh-----hhhCCeEEEecCcccccCCccceeEEEEeCcHHHHHHHHHHHHhhcCCCCHHHHHHHHcCc
Confidence 22221 12234665 56799985 2 34455555 5677776653222212233555555444433
No 309
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.61 E-value=3.4e-13 Score=134.92 Aligned_cols=294 Identities=18% Similarity=0.149 Sum_probs=172.4
Q ss_pred HHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHhhccCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEE
Q 013008 117 ADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSF 196 (451)
Q Consensus 117 p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~ 196 (451)
++-.+++.+.+..... .......++++.++++++.+..++++||++|+..+++.+. . .++|+||+.
T Consensus 10 ~~~~~~v~~~~~~~~~----~~g~~~~~le~~la~~~g~~~~v~~~sgt~al~~~l~al~--~--------~~Gd~Viv~ 75 (380)
T TIGR03588 10 QDDIDAVVEVLKSDFL----TQGPTVPAFEEALAEYVGAKYAVAFNSATSALHIACLALG--V--------GPGDRVWTT 75 (380)
T ss_pred HHHHHHHHHHHhcCCc----cCChhHHHHHHHHHHHHCCCeEEEEcCHHHHHHHHHHHcC--C--------CCCCEEEeC
Confidence 4456777777765321 2234467899999999987777888899999999998652 1 158999999
Q ss_pred cCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCC---CCeEEEEEccccCCCCccccCHHHHHHHH
Q 013008 197 TNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQP---GKTAAVFVEPIQGEGGIYSATKEFLQFLR 273 (451)
Q Consensus 197 ~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~---~~~aavi~ep~~~~~G~~~~~~~~l~~l~ 273 (451)
.++|++........+....+ .+..++.. ..|++++++.+.. .++++|++.. ..|...+ +++|.
T Consensus 76 ~~~~~~~~~~~~~~G~~~~~----~~~~~~~~---~~d~~~l~~~i~~~~~~~t~~v~~~~---~~G~~~~----~~~i~ 141 (380)
T TIGR03588 76 PITFVATANCALYCGAKVDF----VDIDPDTG---NIDEDALEKKLAAAKGKLPKAIVPVD---FAGKSVD----MQAIA 141 (380)
T ss_pred CcchHHHHHHHHHcCCEEEE----EecCCCcC---CcCHHHHHHHhhcccCCCceEEEEeC---CCCccCC----HHHHH
Confidence 99987764332222211111 11111110 1278999999972 3566666422 2454444 89999
Q ss_pred HHHHHhCCEEEEeccccCCCcccccccccccCC--Ccceeeec----ccccCCcccccccc-cHHHHhhccCC---C---
Q 013008 274 DACDDAGALLVFDEVQCGLGRTGYLWAHEHYGI--FPDIMTLA----KPLAGGLPIGAALV-TEKVASAINYG---D--- 340 (451)
Q Consensus 274 ~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~--~pdi~t~s----K~lg~G~~iG~v~~-~~~i~~~~~~~---~--- 340 (451)
++|++||++||+|++|+ +|.. +.....|. .-|++++| |.++.| ..|+++. ++++.+.++.. .
T Consensus 142 ~l~~~~~~~lI~D~a~a-~g~~---~~~~~~g~~~~~d~~~~S~~~~K~~~~~-~GG~v~~~~~~~~~~~~~~~~~g~~~ 216 (380)
T TIGR03588 142 ALAKKHGLKIIEDASHA-LGAE---YGGKPVGNCRYADATVFSFHPVKIITTA-EGGAVTTNDEELAERMRLLRSHGITK 216 (380)
T ss_pred HHHHHcCCEEEEECCCc-ccCc---cCCEeCCCccccceEEEecCCCCccccc-CceEEEECCHHHHHHHHHHHHCCCCC
Confidence 99999999999999997 3311 01112232 34777766 878654 4566665 46666654321 0
Q ss_pred -------------------ccCCCCCcHHHHHHHHHHHHHhcCh-----HHHHH---HHhCCCCcceec---ccc---ee
Q 013008 341 -------------------HGSTFAGSPLVCNAAIAVLDKISNP-----AFLAS---KLARNPHVKDVR---GLG---LI 387 (451)
Q Consensus 341 -------------------~~~t~~~~~~~~aaa~aal~~~~~~-----~~~~~---~~~~~~~~~~v~---g~G---~~ 387 (451)
.+..+..+.+..+.+++.|+.++.. +..+. .++.+|.+.... +.. .+
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~g~n~~m~~l~aa~g~~qL~~l~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~ 296 (380)
T TIGR03588 217 DPLLFEKQDEGPWYYEQQELGFNYRMTDIQAALGLSQLKKLDRFVAKRREIAARYDRLLKDLPYFTPLTIPLGSKSAWHL 296 (380)
T ss_pred CcccccccccCcceeeeeccccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCEeEEEE
Confidence 0111223455555565555544211 11111 334445332111 111 12
Q ss_pred EEEEec----CChHHHHHHHHHCCceeeec----C---------C----C-------CEEEEeCCCCCCHHHHHHHHHHH
Q 013008 388 IGIEFD----VSATPVVDACRDSGLLVLTA----G---------K----G-------NVVRLVPPLIISEQELDQAVEIL 439 (451)
Q Consensus 388 ~~~~~~----~~~~~~~~~l~~~Gv~~~~~----~---------~----~-------~~iri~~~~~~t~e~i~~~l~~l 439 (451)
+.+.+. ....++.+.|.++||.+... . . + ..+++-+....|++|++.+++.|
T Consensus 297 ~~i~~~~~~~~~r~~l~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~dv~~i~~~l 376 (380)
T TIGR03588 297 YPILLDQEFGCTRKEVFEALRAAGIGVQVHYIPVHLQPYYRQGFGDGDLPSAENFYLAEISLPLHPALTLEQQQRVVETL 376 (380)
T ss_pred EEEEECCcCCCCHHHHHHHHHHCCCCcccCCcccccChhhhccCCcCCCcHHHHHHhceEEcCCCCCCCHHHHHHHHHHH
Confidence 223333 24678999999999876521 0 0 0 34666666678999999999999
Q ss_pred HHHH
Q 013008 440 CKTL 443 (451)
Q Consensus 440 ~~~l 443 (451)
+++|
T Consensus 377 ~~~~ 380 (380)
T TIGR03588 377 RKVL 380 (380)
T ss_pred HHhC
Confidence 8764
No 310
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.60 E-value=2.1e-13 Score=136.87 Aligned_cols=204 Identities=20% Similarity=0.219 Sum_probs=124.0
Q ss_pred CHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccccccC--CCccee
Q 013008 234 NIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYG--IFPDIM 311 (451)
Q Consensus 234 d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~--~~pdi~ 311 (451)
|++++++++.+.+..++++ ...+.++ ..+ +++|+++|++||++|++|++|+ +|-.|.....+.++ -..|++
T Consensus 208 D~d~l~~~~~~~~plvii~-g~S~~~~-~~d----l~~i~eia~~~gA~L~VD~AH~-~Gligg~~~~~~~~~~~~~D~v 280 (493)
T PRK13580 208 DYDEIAALAREFKPLILVA-GYSAYPR-RVN----FAKLREIADEVGAVLMVDMAHF-AGLVAGKVFTGDEDPVPHADIV 280 (493)
T ss_pred CHHHHHHHHhhcCCEEEEe-CccccCC-CcC----HHHHHHHHHHcCCEEEEECchh-hceeccccchhhcCCCCCCcEE
Confidence 7899999997655555555 4333343 456 9999999999999999999995 54443211111111 145665
Q ss_pred --eecccccCCcccccccccHHHHhhccCCCccCCCCCc-HHHHHHHHHHHHHhcChH---HHHH-------HHhCCC--
Q 013008 312 --TLAKPLAGGLPIGAALVTEKVASAINYGDHGSTFAGS-PLVCNAAIAVLDKISNPA---FLAS-------KLARNP-- 376 (451)
Q Consensus 312 --t~sK~lg~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~-~~~~aaa~aal~~~~~~~---~~~~-------~~~~~~-- 376 (451)
|++|+|.|. ..|++++++++.+.+... ....++++ +...+|+..++..+.+++ +.++ +.+.+.
T Consensus 281 tgT~hKaL~GP-~GG~I~~~~~l~~~L~~a-~P~i~gg~l~p~iAA~avAl~e~~~~ef~~y~~~l~~Na~~La~~L~~~ 358 (493)
T PRK13580 281 TTTTHKTLRGP-RGGLVLAKKEYADAVDKG-CPLVLGGPLPHVMAAKAVALAEARTPEFQKYAQQVVDNARALAEGFLKR 358 (493)
T ss_pred EeCChhhccCC-CeEEEEecHHHHHHHhhC-CCcccCCCccHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHhc
Confidence 678999542 358888999988888432 23334332 223333333455443332 3333 222111
Q ss_pred Ccceec--ccceeEEEEecCC---hHHHHHHHHHCCceeeec-------C--CCCEEEEeCCC----CCCHHHHHHHHHH
Q 013008 377 HVKDVR--GLGLIIGIEFDVS---ATPVVDACRDSGLLVLTA-------G--KGNVVRLVPPL----IISEQELDQAVEI 438 (451)
Q Consensus 377 ~~~~v~--g~G~~~~~~~~~~---~~~~~~~l~~~Gv~~~~~-------~--~~~~iri~~~~----~~t~e~i~~~l~~ 438 (451)
.+..+. ....++.+++... ...+.+.|.++||++.+. + ....|||.++. .++++|++++++.
T Consensus 359 G~~vv~ggTdshIV~V~lg~~~~~g~~a~~~L~e~GI~vn~i~~Ptvp~g~~~~srLRIg~~A~ttrg~teedi~~iad~ 438 (493)
T PRK13580 359 GARLVTGGTDNHLVLIDVTSFGLTGRQAESALLDAGIVTNRNSIPSDPNGAWYTSGIRLGTPALTTLGMGSDEMDEVAEL 438 (493)
T ss_pred CCCccCCCCCCCEEEEEeCCHHHHHHHHHHHHHHCCeEEccccCCCCCCCCCCCceEEeccchhhhcCCCHHHHHHHHHH
Confidence 111111 2345667777322 235667888999998732 2 02569999887 5679999999999
Q ss_pred HHHHHHHH
Q 013008 439 LCKTLPVL 446 (451)
Q Consensus 439 l~~~l~~~ 446 (451)
|.++++..
T Consensus 439 l~~~l~~~ 446 (493)
T PRK13580 439 IVKVLSNT 446 (493)
T ss_pred HHHHHHhh
Confidence 99988653
No 311
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.59 E-value=2.4e-13 Score=132.04 Aligned_cols=301 Identities=23% Similarity=0.225 Sum_probs=190.5
Q ss_pred CCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHhhccC---CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCc
Q 013008 115 GDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSF---ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPAT 191 (451)
Q Consensus 115 ~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~---~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~ 191 (451)
.+|+|++|+.+..-. |.+ .-......++.+.|...++ .+-+++..||+-|+++++..+. .++|
T Consensus 16 v~~~V~~am~~~~~~--h~s-~~F~~~~~~~~~~L~~v~~t~~~~~~ll~gsGt~amEAav~sl~-----------~pgd 81 (383)
T COG0075 16 VPPRVLLAMARPMVG--HRS-PDFVGIMKEVLEKLRKVFGTENGDVVLLSGSGTLAMEAAVASLV-----------EPGD 81 (383)
T ss_pred CCHHHHHHhcCCCCC--CCC-HHHHHHHHHHHHHHHHHhcCCCCcEEEEcCCcHHHHHHHHHhcc-----------CCCC
Confidence 468888877654311 111 1122336677777777777 2567778999999999999666 2699
Q ss_pred eEEEEcCCccCChhhhhhcc-CCCCcCCCCcCCCCCeeEeeC---CCHHHHHHhcC-CCCeEEEEEccccCCCCccccCH
Q 013008 192 EFVSFTNSFHGRTMGALALT-SKEHYRSPFEPVMPGVNFVEY---GNIEATRKLIQ-PGKTAAVFVEPIQGEGGIYSATK 266 (451)
Q Consensus 192 ~ii~~~~~yhg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~---~d~~~le~~l~-~~~~aavi~ep~~~~~G~~~~~~ 266 (451)
+||+...+..|....-+.-. +... .+...+| -|+++++++|+ .+++.+|.+--.-.++|.+-|
T Consensus 82 kVLv~~nG~FG~R~~~ia~~~g~~v----------~~~~~~wg~~v~p~~v~~~L~~~~~~~~V~~vH~ETSTGvlnp-- 149 (383)
T COG0075 82 KVLVVVNGKFGERFAEIAERYGAEV----------VVLEVEWGEAVDPEEVEEALDKDPDIKAVAVVHNETSTGVLNP-- 149 (383)
T ss_pred eEEEEeCChHHHHHHHHHHHhCCce----------EEEeCCCCCCCCHHHHHHHHhcCCCccEEEEEeccCcccccCc--
Confidence 99999988888754433211 1110 0111122 28999999998 445655555555555677777
Q ss_pred HHHHHHHHHHHHhCCEEEEeccccCCCcccccccccccCCCcceeeecccccCCcccccccccHHHHhhccCCC------
Q 013008 267 EFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINYGD------ 340 (451)
Q Consensus 267 ~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~t~sK~lg~G~~iG~v~~~~~i~~~~~~~~------ 340 (451)
+++|.++|++||+++|+|-|-+ +| |..+-.+.+|+..-+..--|+|++--.+|++..+++..+.+....
T Consensus 150 --l~~I~~~~k~~g~l~iVDaVsS-~G--g~~~~vd~wgiDv~itgSQK~l~~PPGla~v~~S~~a~e~~~~~~~~~~yl 224 (383)
T COG0075 150 --LKEIAKAAKEHGALLIVDAVSS-LG--GEPLKVDEWGIDVAITGSQKALGAPPGLAFVAVSERALEAIEERKHPSFYL 224 (383)
T ss_pred --HHHHHHHHHHcCCEEEEEeccc-CC--CcccchhhcCccEEEecCchhccCCCccceeEECHHHHHHHhcCCCCceee
Confidence 9999999999999999998875 54 445556666654444445599986444677778887776654221
Q ss_pred ------------ccCCCCCcHHHHHHHHHHHHHhcChHHHHHHHhCCC-----Ccceecccce------------eEEEE
Q 013008 341 ------------HGSTFAGSPLVCNAAIAVLDKISNPAFLASKLARNP-----HVKDVRGLGL------------IIGIE 391 (451)
Q Consensus 341 ------------~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~-----~~~~v~g~G~------------~~~~~ 391 (451)
..+.|+.+.....+..++|+.+.++++..+ .++|. ....++..|+ +..+.
T Consensus 225 DL~~~~~~~~~~~~~p~Tppv~~i~aL~~al~~i~~EGle~r-~~RH~~~~~a~r~~~~alGl~~~~~~~~~s~tvta~~ 303 (383)
T COG0075 225 DLKKWLKYMEKKGSTPYTPPVNLIYALREALDLILEEGLEAR-IARHRRLAEALRAGLEALGLELFADPERRSPTVTAIK 303 (383)
T ss_pred cHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHH-HHHHHHHHHHHHHHHHHcCCccccCcccCCCceEEEE
Confidence 123334445556777788998877764332 11111 0111222222 22222
Q ss_pred ec--CChHHHHHHHHHC-CceeeecCC---CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHh
Q 013008 392 FD--VSATPVVDACRDS-GLLVLTAGK---GNVVRLVPPLIISEQELDQAVEILCKTLPVLD 447 (451)
Q Consensus 392 ~~--~~~~~~~~~l~~~-Gv~~~~~~~---~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~~ 447 (451)
.. .+..++...++++ |+.+.++.. +..+||...-..+.+++..++.+|+.++.++.
T Consensus 304 ~P~g~~~~~~~~~~~~~~g~~i~gg~~~l~gkifRIGhMG~~~~~dv~~~l~ale~~L~~~g 365 (383)
T COG0075 304 VPEGVDDKKVRRALLKEYGVEIAGGQGPLKGKIFRIGHMGNVRPEDVLAALAALEAALRELG 365 (383)
T ss_pred CCCCCCcHHHHHHHHHhCCEEecccccccCccEEEEecCccCCHHHHHHHHHHHHHHHHHcC
Confidence 21 2334444466655 887776632 56899987778899999999999999998764
No 312
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.57 E-value=5.5e-13 Score=132.12 Aligned_cols=274 Identities=13% Similarity=0.068 Sum_probs=158.8
Q ss_pred CCCCCHHHHHHHHHHHhhcccccCC-CC------CHHHHHHHHHHhhccC--CCeEEecCCHHHHHHHHHHHHHHHhhhc
Q 013008 112 LGHGDADWIKAVVDQANVLTHVSNM-YY------SIPQIELAKRLVACSF--ADRVFFSNTGTEANEAAIKFARKFQRHS 182 (451)
Q Consensus 112 lG~~~p~v~~a~~~~~~~~~~~~~~-~~------~~~~~~l~~~l~~~~~--~e~v~~~~sG~eA~~~al~~a~~~~~~~ 182 (451)
.|..++.+.+++.+.+......+.. .+ .....+++++++++++ .+.++|++|+++|+..+++.+.....
T Consensus 7 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~l~~~~~-- 84 (353)
T TIGR03235 7 TTPIDPAVAEAMLPWLLEEFGNPSSRTHEFGHNAKKAVERARKQVAEALGADTEEVIFTSGATESNNLAILGLARAGE-- 84 (353)
T ss_pred CCCCCHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhcc--
Confidence 3457899999999887542111111 11 1225678888998887 56899999999999999987653210
Q ss_pred CCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeC-----CCHHHHHHhcCCCCeEEEEEccccC
Q 013008 183 NPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEY-----GNIEATRKLIQPGKTAAVFVEPIQG 257 (451)
Q Consensus 183 ~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~le~~l~~~~~aavi~ep~~~ 257 (451)
.++++.|+.....|+............. ..+..++. .|+++|++.+++ ++++|+++.+++
T Consensus 85 -----~~g~~~vi~~~~~~~s~~~~~~~~~~~G---------~~v~~v~~~~~~~~d~~~l~~~l~~-~~~lv~~~~~~n 149 (353)
T TIGR03235 85 -----QKGKKHIITSAIEHPAVLEPIRALERNG---------FTVTYLPVDESGRIDVDELADAIRP-DTLLVSIMHVNN 149 (353)
T ss_pred -----cCCCCeeeEcccccHHHHHHHHHHHhcC---------CEEEEEccCCCCcCCHHHHHHhCCC-CCEEEEEEcccC
Confidence 0232344444455554433322110000 11122221 278999999964 578888888888
Q ss_pred CCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccccccCCCcceeeec--ccccCCcccccccccHHHHhh
Q 013008 258 EGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLA--KPLAGGLPIGAALVTEKVASA 335 (451)
Q Consensus 258 ~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~t~s--K~lg~G~~iG~v~~~~~i~~~ 335 (451)
++|.+.+ +++|.++|++||+++|+|++|. +|.. . .+.....+|++++| |.++. ..+|+++++++..+.
T Consensus 150 ~tG~~~~----~~~I~~l~~~~~~~~ivD~a~~-~g~~--~--~~~~~~~~D~~~~s~~K~~gp-~g~g~l~~~~~~~~~ 219 (353)
T TIGR03235 150 ETGSIQP----IREIAEVLEAHEAFFHVDAAQV-VGKI--T--VDLSADRIDLISCSGHKIYGP-KGIGALVIRKRGKPK 219 (353)
T ss_pred CceeccC----HHHHHHHHHHcCCEEEEEchhh-cCCc--c--ccccccCCCEEEeehhhcCCC-CceEEEEEccCcccc
Confidence 8898877 8999999999999999999985 4322 1 11122357888776 97542 347888888764322
Q ss_pred --ccCCCc-------cCCCCCcHHHHHHHHHHHHHhcC--hHHHHH-------HHhCC--CCcceec----ccceeEEEE
Q 013008 336 --INYGDH-------GSTFAGSPLVCNAAIAVLDKISN--PAFLAS-------KLARN--PHVKDVR----GLGLIIGIE 391 (451)
Q Consensus 336 --~~~~~~-------~~t~~~~~~~~aaa~aal~~~~~--~~~~~~-------~~~~~--~~~~~v~----g~G~~~~~~ 391 (451)
+.+... ......++...++..++++.+.. +...++ +.+.+ +.+..+. ....+..+.
T Consensus 220 ~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~~g~~~~~~~~~~~~~i~~~~ 299 (353)
T TIGR03235 220 APLKPIMFGGGQERGLRPGTLPVHLIVGMGEAAEIARRNAQAWEVKLRAMRNQLRDALQTLGVKLNGDPAETIPHILNFS 299 (353)
T ss_pred cccCceeeCCCCcCccccCCCChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCeEEeCCcccccCCEEEEE
Confidence 222111 01123455666667777776532 122222 22221 2222111 112244444
Q ss_pred ec-CChHHHHHHHHHCCceeeec
Q 013008 392 FD-VSATPVVDACRDSGLLVLTA 413 (451)
Q Consensus 392 ~~-~~~~~~~~~l~~~Gv~~~~~ 413 (451)
++ .+..++.+.|. +||.+.++
T Consensus 300 ~~~~~~~~v~~~L~-~~i~v~~g 321 (353)
T TIGR03235 300 IDGVNSEALIVNLR-ADAAVSTG 321 (353)
T ss_pred eCCcCHHHHHHHHh-CCeEEEch
Confidence 43 34567777775 58888765
No 313
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.57 E-value=2.8e-13 Score=132.58 Aligned_cols=280 Identities=20% Similarity=0.189 Sum_probs=178.3
Q ss_pred ccCCCCCHHHHHHHHHHhhccCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccC
Q 013008 133 VSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTS 212 (451)
Q Consensus 133 ~~~~~~~~~~~~l~~~l~~~~~~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~ 212 (451)
.+....++....|++.++++.+.+.++.++||..|+..++....+ ++|+||..+..|.|..........
T Consensus 56 ~Y~R~~nPT~~~lE~~~a~LEg~~~~~afsSGmaAI~~~~l~ll~-----------~GD~vl~~~~~YG~t~~~~~~~l~ 124 (396)
T COG0626 56 DYSRTGNPTRDALEEALAELEGGEDAFAFSSGMAAISTALLALLK-----------AGDHVLLPDDLYGGTYRLFEKILQ 124 (396)
T ss_pred ccccCCCccHHHHHHHHHHhhCCCcEEEecCcHHHHHHHHHHhcC-----------CCCEEEecCCccchHHHHHHHHHH
Confidence 345556777999999999999999999999999999998876652 689999999999765543322211
Q ss_pred CCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCC
Q 013008 213 KEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGL 292 (451)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~ 292 (451)
...-.+.+++..|.+.+++.+.++++++|++|++-++.--++. +++|+++|+++|+++|+|+++...
T Consensus 125 ---------~~gi~~~~~d~~~~~~~~~~~~~~~tk~v~lEtPsNP~l~v~D----I~~i~~~A~~~g~~vvVDNTfatP 191 (396)
T COG0626 125 ---------KFGVEVTFVDPGDDEALEAAIKEPNTKLVFLETPSNPLLEVPD----IPAIARLAKAYGALVVVDNTFATP 191 (396)
T ss_pred ---------hcCeEEEEECCCChHHHHHHhcccCceEEEEeCCCCccccccc----HHHHHHHHHhcCCEEEEECCcccc
Confidence 1223455666667777777776568999999998777665666 999999999999999999998532
Q ss_pred CcccccccccccCCCcceee--ecccccC-C-ccccccccc-HHHHhhccCCCc-cCCCCCcHHHHHHHHHHHHHhc-C-
Q 013008 293 GRTGYLWAHEHYGIFPDIMT--LAKPLAG-G-LPIGAALVT-EKVASAINYGDH-GSTFAGSPLVCNAAIAVLDKIS-N- 364 (451)
Q Consensus 293 gr~G~~~~~~~~~~~pdi~t--~sK~lg~-G-~~iG~v~~~-~~i~~~~~~~~~-~~t~~~~~~~~aaa~aal~~~~-~- 364 (451)
..+.-+....||++ ..|.++| + .-.|.++++ +++.+.+..... ......+|..+...+..|+.+. +
T Consensus 192 ------~~q~PL~~GaDIVvhSaTKyl~GHsDvl~G~v~~~~~~~~~~~~~~~~~~~G~~l~p~dA~l~lRGlkTL~~Rm 265 (396)
T COG0626 192 ------VLQRPLELGADIVVHSATKYLGGHSDVLGGVVLTPNEELYELLFFAQRANTGAVLSPFDAWLLLRGLRTLALRM 265 (396)
T ss_pred ------cccChhhcCCCEEEEeccccccCCcceeeeEEecChHHHHHHHHHHHHhhcCCCCCHHHHHHHHhccchHHHHH
Confidence 12333344578774 5699998 4 666777755 455555421111 1122245666655554444321 0
Q ss_pred hHHHHH------HHhCCCCccee------------------cccceeEEEEecCC--hHHHHHHHHHC-------Cc---
Q 013008 365 PAFLAS------KLARNPHVKDV------------------RGLGLIIGIEFDVS--ATPVVDACRDS-------GL--- 408 (451)
Q Consensus 365 ~~~~~~------~~~~~~~~~~v------------------~g~G~~~~~~~~~~--~~~~~~~l~~~-------Gv--- 408 (451)
+...++ +++.+|.+..| .|.|.++.|++... ..+|.+.|.-- |+
T Consensus 266 ~~~~~nA~~IA~~L~~~p~V~~V~yPgl~shp~he~~~rq~~g~gg~~Sf~l~~~~~~~~f~~~L~l~~~a~SlGgveSL 345 (396)
T COG0626 266 ERHNENALKIAEFLADHPKVKKVYYPGLPSHPGHELAKRQMTGYGGLFSFELKNEEAAKKFLDSLKLFKLAESLGGVESL 345 (396)
T ss_pred HHHHHHHHHHHHHHhcCCCeEEEECCCCCCCCcHHHHHHhcCCCceEEEEEeCChHHHHHHHHhCCccEEeccCCCcccc
Confidence 111111 45556654432 24788999998542 33344433211 11
Q ss_pred eeeec---------------C-CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 013008 409 LVLTA---------------G-KGNVVRLVPPLIISEQELDQAVEILCKTLPVL 446 (451)
Q Consensus 409 ~~~~~---------------~-~~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~ 446 (451)
+..|. | .++.+|+++.+ |+++.+++-|+++++.+
T Consensus 346 i~~pa~~th~~~~~~~r~~~Gi~~~LvRlSVGl----Ed~eDLi~Dl~~Al~~~ 395 (396)
T COG0626 346 ISHPATMTHASIPLEERAKAGITDGLVRLSVGL----EDVEDLIADLEQALAKA 395 (396)
T ss_pred cccccccCcccCCHhHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHHHhh
Confidence 11110 0 13568886554 66777888888887754
No 314
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.57 E-value=1.3e-12 Score=132.21 Aligned_cols=278 Identities=18% Similarity=0.171 Sum_probs=165.8
Q ss_pred HHHHHHHHHhhccCCCeEEecCCHHHHHHHHHHHHHHH-hhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCC
Q 013008 141 PQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKF-QRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSP 219 (451)
Q Consensus 141 ~~~~l~~~l~~~~~~e~v~~~~sG~eA~~~al~~a~~~-~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~ 219 (451)
...+|+++++++++.+.+++++||++|+..|+.++... ....+ ..+++.||+..++|.+........+..+.+.
T Consensus 64 ~~~~fe~~lA~~~g~~~~v~~~sGt~al~~aL~al~~~~~~~~~---~~pGd~VIv~~~t~~a~~~~v~~~G~~pv~v-- 138 (438)
T PRK15407 64 FNDAFEKKLAEFLGVRYALLVNSGSSANLLAFSALTSPKLGDRA---LKPGDEVITVAAGFPTTVNPIIQNGLVPVFV-- 138 (438)
T ss_pred hHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHHhhccccccC---CCCCCEEEECCCCcHHHHHHHHHcCCEEEEE--
Confidence 36789999999999889999999999999999876311 00000 0258999999999976654433322211110
Q ss_pred CcCCCCCeeEeeCC-CHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcc--c
Q 013008 220 FEPVMPGVNFVEYG-NIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRT--G 296 (451)
Q Consensus 220 ~~~~~~~~~~~~~~-d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~--G 296 (451)
+..+ -.++ |++++++.+.+ ++++|++.+..|+. . .+++|.++|++||++||+|++|+ +|-. |
T Consensus 139 --dvd~----~~~~id~~~le~~i~~-~tkaVi~~~~~G~p---~----dl~~I~~la~~~gi~vIeDaa~a-~G~~~~g 203 (438)
T PRK15407 139 --DVEL----PTYNIDASLLEAAVSP-KTKAIMIAHTLGNP---F----DLAAVKAFCDKHNLWLIEDNCDA-LGSTYDG 203 (438)
T ss_pred --ecCC----CcCCcCHHHHHHHcCc-CCeEEEEeCCCCCh---h----hHHHHHHHHHHCCCEEEEECccc-hhhhcCC
Confidence 1111 0122 78999999865 57788887765442 2 38999999999999999999996 4321 2
Q ss_pred ccccccccCCCcceeeec----ccccCCccccccccc-HHHHhhccC----CC---------------------------
Q 013008 297 YLWAHEHYGIFPDIMTLA----KPLAGGLPIGAALVT-EKVASAINY----GD--------------------------- 340 (451)
Q Consensus 297 ~~~~~~~~~~~pdi~t~s----K~lg~G~~iG~v~~~-~~i~~~~~~----~~--------------------------- 340 (451)
. ..|-.-|+.+|| |.+..| ..|+++.+ +++.+.++. +.
T Consensus 204 ~-----~~G~~gd~~~fSf~~~k~~~~g-eGG~l~t~d~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (438)
T PRK15407 204 R-----MTGTFGDIATLSFYPAHHITMG-EGGAVFTNDPLLKKIIESFRDWGRDCWCAPGCDNTCGKRFGWQLGELPFGY 277 (438)
T ss_pred e-----eeeccCceEEEeCCCCCCcccc-CceEEEECCHHHHHHHHHHHHhCcccccccccccccccccccccccccccc
Confidence 2 112223667665 666644 34888775 445443221 00
Q ss_pred --------ccCCCCCcHHHHHHHHHHHHHhcChHHH-----HH---HHhCCCC-cce--ec-cc-ce--eEEEEecC---
Q 013008 341 --------HGSTFAGSPLVCNAAIAVLDKISNPAFL-----AS---KLARNPH-VKD--VR-GL-GL--IIGIEFDV--- 394 (451)
Q Consensus 341 --------~~~t~~~~~~~~aaa~aal~~~~~~~~~-----~~---~~~~~~~-~~~--v~-g~-G~--~~~~~~~~--- 394 (451)
.+..+..+.+.++.++.-|+.+++..-. +. .++.++. +.. .. +. .. ++.+.++.
T Consensus 278 ~~~~~~~~~G~n~rmsel~AAig~~qL~~l~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 357 (438)
T PRK15407 278 DHKYTYSHLGYNLKITDMQAAIGLAQLEKLPGFIEARKANFAYLKEGLASLEDFLILPEATPNSDPSWFGFPITVKEDAG 357 (438)
T ss_pred cccccccccccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCccccCcCCCCCeeEEEEEEEEECCcCC
Confidence 1222345677788888888765331111 11 2333331 111 11 11 12 22233321
Q ss_pred -ChHHHHHHHHHCCceeeec-----CC----------------------CCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q 013008 395 -SATPVVDACRDSGLLVLTA-----GK----------------------GNVVRLVPPLIISEQELDQAVEILCKTLP 444 (451)
Q Consensus 395 -~~~~~~~~l~~~Gv~~~~~-----~~----------------------~~~iri~~~~~~t~e~i~~~l~~l~~~l~ 444 (451)
...++.+.|.++||-..+. .. ...+.+-.....+++|++.+++.|+++++
T Consensus 358 ~~Rd~l~~~L~~~GI~~~~~~~~~~~~~p~~~~~~~~~~~~~P~ae~~~~~~l~LP~~~~l~~~~v~~i~~~i~~~~~ 435 (438)
T PRK15407 358 FTRVELVKYLEENKIGTRLLFAGNLTRQPYFKGVKYRVVGELTNTDRIMNDTFWIGVYPGLTEEMLDYVIEKIEEFFG 435 (438)
T ss_pred CCHHHHHHHHHHCCCCccccCCCccccChhhhhcCCCCCCCChHHHHHHhCeEEecCCCCCCHHHHHHHHHHHHHHHh
Confidence 3578999999999854311 00 01233433445689999999999999875
No 315
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.56 E-value=1.2e-12 Score=141.73 Aligned_cols=279 Identities=18% Similarity=0.169 Sum_probs=178.5
Q ss_pred HHHHHHHHhhccCCCeEEecCCHH----HHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcC
Q 013008 142 QIELAKRLVACSFADRVFFSNTGT----EANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYR 217 (451)
Q Consensus 142 ~~~l~~~l~~~~~~e~v~~~~sG~----eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~ 217 (451)
..++.++|+++++.+.|.|+++++ +|+..+++. |.+.++.. .| ++++....-||.........|..
T Consensus 570 ~~~~r~~la~i~g~~~v~f~pnaga~ge~a~~~vi~~---~~~~~Gd~---~r-~~vli~~~aH~sn~a~a~~~G~~--- 639 (993)
T PLN02414 570 FEDLGDLLCEITGFDSFSLQPNAGAAGEYAGLMVIRA---YHLSRGDH---HR-NVCIIPVSAHGTNPASAAMCGMK--- 639 (993)
T ss_pred HHHHHHHHHHHhCCCeEEEcCCCcHHHHHHHHHHHHH---HHhccCCC---CC-CEEEeCCCcCccCHHHHHHCCCE---
Confidence 568899999999999999998877 677777664 44321110 12 35666668899877665553322
Q ss_pred CCCcCCCCCeeEeeCC-----CHHHHHHhcCC--CCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEecccc
Q 013008 218 SPFEPVMPGVNFVEYG-----NIEATRKLIQP--GKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQC 290 (451)
Q Consensus 218 ~~~~~~~~~~~~~~~~-----d~~~le~~l~~--~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t 290 (451)
+..++.+ |+++|++++++ +++++|++.-.++.+|...+ +++|.++|+++|+++++|-++.
T Consensus 640 ---------vv~v~~d~~G~vDle~L~~~i~~~~~~ta~V~vt~pSn~gg~e~~----I~eI~~iah~~Galv~vDgAq~ 706 (993)
T PLN02414 640 ---------IVVVGTDAKGNINIEELRKAAEAHKDNLAALMVTYPSTHGVYEEG----IDEICDIIHDNGGQVYMDGANM 706 (993)
T ss_pred ---------EEEeccCCCCCcCHHHHHHHHhccCCCeEEEEEECCCccccccch----HHHHHHHHHHcCCEEEEEecCH
Confidence 2223221 89999999984 46888888777777777666 9999999999999999999984
Q ss_pred CCCcccccccccccCCCcceeee--ccccc-----CCcccccccccHHHHhhccCCC-----------c---cCCCC---
Q 013008 291 GLGRTGYLWAHEHYGIFPDIMTL--AKPLA-----GGLPIGAALVTEKVASAINYGD-----------H---GSTFA--- 346 (451)
Q Consensus 291 g~gr~G~~~~~~~~~~~pdi~t~--sK~lg-----~G~~iG~v~~~~~i~~~~~~~~-----------~---~~t~~--- 346 (451)
.+..+. ..-..+..|++++ .|+|+ ||-.+|++.++++++..+.... . .+|.+
T Consensus 707 -~a~~~l---~~p~~~GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~~~L~p~lPg~~v~~~~~~~~r~~~s~iGt~~~a~ 782 (993)
T PLN02414 707 -NAQVGL---TSPGFIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVPTGGIPRPEKTQPLGTISAAP 782 (993)
T ss_pred -HhccCc---CCccccCCCEEEecCCccCCcCcccCCCCeeeEEEchhhcccCCCCccccCCCcccccCCCCcCCccchh
Confidence 111111 1111345788877 48775 2466899988988877653210 0 12322
Q ss_pred -CcHHHHHHHHHHHHHhcChHHHHH--------------HHhCCCCcceecccce---eEEEEec-------CChHHHHH
Q 013008 347 -GSPLVCNAAIAVLDKISNPAFLAS--------------KLARNPHVKDVRGLGL---IIGIEFD-------VSATPVVD 401 (451)
Q Consensus 347 -~~~~~~aaa~aal~~~~~~~~~~~--------------~~~~~~~~~~v~g~G~---~~~~~~~-------~~~~~~~~ 401 (451)
++.+.+.++...+..+-.+++.+. +.+.++ +......|. -+.+.+. ....++.+
T Consensus 783 ~g~al~l~~A~~yi~~lG~~Gl~~~a~~a~~nAnYl~~rL~~~~~-~~~~~~~~~~~hEfv~~~~~l~~~~g~~~~di~k 861 (993)
T PLN02414 783 WGSALILPISYTYIAMMGSEGLTDASKIAILNANYMAKRLEGHYP-VLFRGKNGTCAHEFIIDLRPFKNTAGIEPEDVAK 861 (993)
T ss_pred hhhHHHHHHHHHHHHHHCHhHHHHHHHHHHHHHHHHHHHHHhhCC-ccccCCCCCeeeeEEEeccccccccCCCHHHHHH
Confidence 333444455555555544544221 222222 111111222 1122222 34578999
Q ss_pred HHHHCCceeeecC--CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHhh
Q 013008 402 ACRDSGLLVLTAG--KGNVVRLVPPLIISEQELDQAVEILCKTLPVLDS 448 (451)
Q Consensus 402 ~l~~~Gv~~~~~~--~~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~~~ 448 (451)
+|++.|+...... ..+.+|+.|.-..+++|||+++++|.++.+++++
T Consensus 862 rL~d~Gihapt~~~pv~~~lmiepTE~~skeelDrf~~al~~i~~e~~~ 910 (993)
T PLN02414 862 RLMDYGFHAPTMSWPVPGTLMIEPTESESKAELDRFCDALISIREEIAD 910 (993)
T ss_pred HHHHcCcEEeeeccccCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999998764321 1367999999999999999999999999988875
No 316
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.54 E-value=1.2e-13 Score=121.40 Aligned_cols=165 Identities=24% Similarity=0.220 Sum_probs=113.8
Q ss_pred HHHHHHHHhhcc--CCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCC
Q 013008 142 QIELAKRLVACS--FADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSP 219 (451)
Q Consensus 142 ~~~l~~~l~~~~--~~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~ 219 (451)
..++.+++++.+ +.+++++++||++|+..+++.++. ++++|++.++.||+.........+......
T Consensus 2 ~~~~~~~l~~~~~~~~~~~~~~~~~t~a~~~~~~~~~~-----------~~~~v~~~~~~~~~~~~~~~~~~g~~~~~v- 69 (170)
T cd01494 2 LEELEEKLARLLQPGNDKAVFVPSGTGANEAALLALLG-----------PGDEVIVDANGHGSRYWVAAELAGAKPVPV- 69 (170)
T ss_pred HHHHHHHHHHHcCCCCCcEEEeCCcHHHHHHHHHHhCC-----------CCCEEEEeecccceehhhHHHhcCCEEEEe-
Confidence 357888899998 788999999999999999998762 478899999999988632222222111110
Q ss_pred CcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccc
Q 013008 220 FEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLW 299 (451)
Q Consensus 220 ~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~ 299 (451)
+....... ..|.+.+++.....+++++++++.++++|...+ +++|+++|+++|+++|+||+|.++......
T Consensus 70 --~~~~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~~~~g~~~~----~~~l~~~~~~~~~~li~D~a~~~~~~~~~~- 140 (170)
T cd01494 70 --PVDDAGYG--GLDVAILEELKAKPNVALIVITPNTTSGGVLVP----LKEIRKIAKEYGILLLVDAASAGGASPAPG- 140 (170)
T ss_pred --ccCCCCcc--chhhhhhhhccccCceEEEEEecCcCCCCeEcC----HHHHHHHHHHcCCEEEEecccccccccccc-
Confidence 10000000 012235555444568899999999888887766 699999999999999999999876443322
Q ss_pred cccccCCCcceeeec--ccccCCccccccccc
Q 013008 300 AHEHYGIFPDIMTLA--KPLAGGLPIGAALVT 329 (451)
Q Consensus 300 ~~~~~~~~pdi~t~s--K~lg~G~~iG~v~~~ 329 (451)
.......+|+++.| |.+++ .++|+++++
T Consensus 141 -~~~~~~~~d~~~~s~~K~~~~-~~~G~l~~~ 170 (170)
T cd01494 141 -VLIPEGGADVVTFSLHKNLGG-EGGGVVIVK 170 (170)
T ss_pred -cccccccCCEEEEEcccccCC-CceEEEEeC
Confidence 11223458888777 99987 778887653
No 317
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=99.53 E-value=2e-13 Score=122.15 Aligned_cols=272 Identities=18% Similarity=0.246 Sum_probs=170.6
Q ss_pred HHHHHHHhhccC--CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCC
Q 013008 143 IELAKRLVACSF--ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPF 220 (451)
Q Consensus 143 ~~l~~~l~~~~~--~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~ 220 (451)
.++...++.--+ .|.+.+..|..|-+.+.+|+.+. +++++|+...|+|.-++..+.. .+.....
T Consensus 72 k~ls~a~~~dkpLt~dnic~GvGsDE~ID~iiR~~c~----------PGkeKIl~cPPtysMY~v~A~i-Nd~eVvk--- 137 (375)
T KOG0633|consen 72 KRLSDALAQDKPLTSDNICVGVGSDELIDLIIRCVCD----------PGKEKILDCPPTYSMYVVDAAI-NDAEVVK--- 137 (375)
T ss_pred chhhhhcccCCCCCccceEEecCcHHHHHHHHhheec----------CCccceeecCCcceeEEEEeec-CCceEEE---
Confidence 345555554444 78999999999999999998873 2569999999999766543322 1111111
Q ss_pred cCCCCCeeEeeCCCHHHHHHhcCC-CCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccc
Q 013008 221 EPVMPGVNFVEYGNIEATRKLIQP-GKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLW 299 (451)
Q Consensus 221 ~~~~~~~~~~~~~d~~~le~~l~~-~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~ 299 (451)
.|+.+++.. |.+++.+.++. ..++++++.+..+++|... ..+.+..|.+.-+ +.++++||+|-.|. |...
T Consensus 138 vpl~pdF~l----nvdai~evl~~ds~iK~~F~tSPgNPtg~~i-k~~di~KiLe~p~--nglVVvDEAYidFs--g~~S 208 (375)
T KOG0633|consen 138 VPLNPDFSL----NVDAIAEVLELDSKIKCIFLTSPGNPTGSII-KEDDILKILEMPD--NGLVVVDEAYIDFS--GVES 208 (375)
T ss_pred ecCCCCccc----cHHHHHHHHhccccceEEEEcCCCCCCcccc-cHHHHHHHHhCCC--CcEEEEeeeeEeec--cccc
Confidence 133333322 78899888883 4677777776666666654 5555666665443 78999999998873 3222
Q ss_pred cccccCCCccee---eeccccc-CCcccccccccHHHHhhccCCCccCCCCCcHHHHHHHHHHHHH-----hcC--hHHH
Q 013008 300 AHEHYGIFPDIM---TLAKPLA-GGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDK-----ISN--PAFL 368 (451)
Q Consensus 300 ~~~~~~~~pdi~---t~sK~lg-~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~-----~~~--~~~~ 368 (451)
...+-.-.|+++ ||||++| +|+|+|+...+.++.+.+.... ..|+-+.++..+|++|+.- ++. +.+.
T Consensus 209 ~~~lV~kYpNLivlqTlSKsfGLAGiRvG~~~~~~~ia~iln~~K--aPYNiS~~~s~~AL~Als~~n~kkme~~rdaiv 286 (375)
T KOG0633|consen 209 RMKLVKKYPNLIVLQTLSKSFGLAGIRVGYGAFPLSIAEILNRAK--APYNISVAGSVAALAALSDSNGKKMEDVRDAIV 286 (375)
T ss_pred cchHhHhCCceeehhhhhhhcCcceeEeecccccHHHHHHHHhcc--CCccccchhHHHHHHhcCcccchHHHHHHHHHH
Confidence 222223346665 7899999 6999999999999988876443 3566666777777777762 111 1111
Q ss_pred HH------HHhCCCCcceecc--cceeEEEEecC----ChHHHHH-HHHHCCceeeecCC----CCEEEEeCCCCCCHHH
Q 013008 369 AS------KLARNPHVKDVRG--LGLIIGIEFDV----SATPVVD-ACRDSGLLVLTAGK----GNVVRLVPPLIISEQE 431 (451)
Q Consensus 369 ~~------~~~~~~~~~~v~g--~G~~~~~~~~~----~~~~~~~-~l~~~Gv~~~~~~~----~~~iri~~~~~~t~e~ 431 (451)
++ .+..+|.+.++.+ ...|+.+++.. .+..+.. .+-+.||.++-.+. .+.+|++ ..|+|+
T Consensus 287 ~er~RL~keLt~v~~~~~~~gg~daNFiLi~v~~~~n~~akkly~q~at~~gVvVRfrgse~~c~G~lRit---vGt~Ee 363 (375)
T KOG0633|consen 287 RERERLFKELTEVPFLNDYPGGSDANFILIEVTGGDNGMAKKLYKQDATKMGVVVRFRGSEEGCKGYLRIT---VGTPEE 363 (375)
T ss_pred HHHHHHHHHhhcCccccCCCCcccccEEEEEEcCCCcHHHHHHHHHHHHhcceEEEEcCCccccceeEEEE---cCCccc
Confidence 11 2334454444333 13455566521 1233333 33367999886543 3568886 447788
Q ss_pred HHHHHHHHHHH
Q 013008 432 LDQAVEILCKT 442 (451)
Q Consensus 432 i~~~l~~l~~~ 442 (451)
-+.+++.|+++
T Consensus 364 ntvL~k~~K~~ 374 (375)
T KOG0633|consen 364 NTVLMKCLKQF 374 (375)
T ss_pred chHHHHHHHhh
Confidence 88888888765
No 318
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.53 E-value=6.9e-13 Score=128.52 Aligned_cols=199 Identities=18% Similarity=0.248 Sum_probs=135.2
Q ss_pred CEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccc--cCCCCCHH---HHHHHHHHhhccC--CCeEEecCCHHHHHHH
Q 013008 98 REYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHV--SNMYYSIP---QIELAKRLVACSF--ADRVFFSNTGTEANEA 170 (451)
Q Consensus 98 ~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~--~~~~~~~~---~~~l~~~l~~~~~--~e~v~~~~sG~eA~~~ 170 (451)
.-|+|..+ .|-.+|.|.+|+.+.+..+... +..+.... .++-++.++++.+ ..+|+||+++||++.+
T Consensus 44 ~vyld~~a------t~p~~~~Vldam~~~~~~~~~nPh~~~y~w~~~~~~E~aR~~VAklInAd~~dIiFts~ATEs~Nl 117 (428)
T KOG1549|consen 44 PVYLDNQA------TGPMDPRVLDAMLPYLLEYLGNPHSRSYGWKAEDAVEAAREQVAKLINADPSDIVFTSGATESNNL 117 (428)
T ss_pred cEEEecCc------CCCCCHHHHHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHHHhCCCCCcEEEeCCchHHHHH
Confidence 46788655 5568999999999987764222 12122222 3445556677776 4459999999999999
Q ss_pred HHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCC-----CHHHHHHhcCCC
Q 013008 171 AIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYG-----NIEATRKLIQPG 245 (451)
Q Consensus 171 al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~le~~l~~~ 245 (451)
+++-.-.+.+. + .+..||.++..| .+...++...-... ..+.++|.+ |++.+++.|++
T Consensus 118 vl~~v~~~~~~-~-----~~k~iitl~~eH-~~v~~s~~~l~~~g---------~~Vt~lpv~~~~~~d~~~~~~~i~~- 180 (428)
T KOG1549|consen 118 VLKGVARFFGD-K-----TKKHIITLQTEH-PCVLDSCRALQEEG---------LEVTYLPVEDSGLVDISKLREAIRS- 180 (428)
T ss_pred HHHHhhccccc-c-----ccceEEEecccC-cchhHHHHHHHhcC---------eEEEEeccCccccccHHHHHHhcCC-
Confidence 99965433221 0 122667666554 44433332211111 223344433 78999999976
Q ss_pred CeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccccccCCCcceeeec--ccccC-Ccc
Q 013008 246 KTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLA--KPLAG-GLP 322 (451)
Q Consensus 246 ~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~t~s--K~lg~-G~~ 322 (451)
++.+|.++.++++.|...| +++|.++|+++++.+++|-+|. . |+. ..+--.+.+|+.+++ |.+|. |
T Consensus 181 ~T~lv~I~~Vnn~~gv~~P----v~EI~~icr~~~v~v~~DaAQa-v---G~i-~vDV~eln~D~~s~s~HK~ygp~~-- 249 (428)
T KOG1549|consen 181 KTRLVSIMHVNNEIGVLQP----VKEIVKICREEGVQVHVDAAQA-V---GKI-PVDVQELNADFLSISAHKIYGPPG-- 249 (428)
T ss_pred CceEEEEEecccCcccccc----HHHHHHHhCcCCcEEEeehhhh-c---CCc-cccHHHcCchheeeecccccCCCc--
Confidence 7999999999999999999 9999999999999999999995 4 331 234445678988877 88874 4
Q ss_pred cccccccH
Q 013008 323 IGAALVTE 330 (451)
Q Consensus 323 iG~v~~~~ 330 (451)
+|++.+++
T Consensus 250 iGaLYvr~ 257 (428)
T KOG1549|consen 250 IGALYVRR 257 (428)
T ss_pred ceEEEEcc
Confidence 88888775
No 319
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.51 E-value=1.1e-11 Score=124.91 Aligned_cols=316 Identities=12% Similarity=0.001 Sum_probs=186.6
Q ss_pred CCHHHHHHHHHHHhhc-ccc-cCCCCCHHHHHHHHHHhhccCC----CeEEe--cCCHHHHHHHHHHHHHHHhhhc---C
Q 013008 115 GDADWIKAVVDQANVL-THV-SNMYYSIPQIELAKRLVACSFA----DRVFF--SNTGTEANEAAIKFARKFQRHS---N 183 (451)
Q Consensus 115 ~~p~v~~a~~~~~~~~-~~~-~~~~~~~~~~~l~~~l~~~~~~----e~v~~--~~sG~eA~~~al~~a~~~~~~~---~ 183 (451)
.+|++.+++.+.+... .+. +.+.......+..+++++.++. +.+.+ |+||||||..|+..++...... .
T Consensus 53 ~~p~~~~~~~~~l~~~~~np~s~~~~~~le~~~~~~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~~~ 132 (431)
T TIGR01788 53 MEPEARKLMDETINKNMIDKDEYPQTAEIENRCVNMLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRMEAA 132 (431)
T ss_pred CCHHHHHHHHHHHhcCCCCcccCccHHHHHHHHHHHHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHHHhc
Confidence 5788999988888643 221 1111224466777888888873 35655 7999999999998887432110 0
Q ss_pred CCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCC-eeEeeCCCHHHHHHhcCCCCeEEEEEccccCCCCcc
Q 013008 184 PDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPG-VNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIY 262 (451)
Q Consensus 184 ~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~le~~l~~~~~aavi~ep~~~~~G~~ 262 (451)
+.. .....|+....-|-+...+....+... ...|..++ ... |+++|+++|++ ++.+|++.-.+++.|.+
T Consensus 133 g~~--~~~~~ii~s~~~H~sv~ka~~~lg~~v---~~i~~d~~~~~v----d~~~L~~~i~~-~t~lV~~t~g~t~tG~i 202 (431)
T TIGR01788 133 GKP--TDKPNLVMGSNVQVCWEKFARYFDVEL---REVPMDPGRYVI----DPEQVVEAVDE-NTIGVVCILGTTYTGEY 202 (431)
T ss_pred CCC--CCCcEEEEcCcchHHHHHHHHHcCcee---EEEecCCCceee----CHHHHHHHHhh-CCeEEEEEeCCCCCccc
Confidence 000 012356666666766554443322111 01122221 111 78999999975 46778888888888998
Q ss_pred ccCHHHHHHHHHHHHHh------CCEEEEeccccCCCc---ccc-cccccccCCCcceeeec--ccccCCcccccccccH
Q 013008 263 SATKEFLQFLRDACDDA------GALLVFDEVQCGLGR---TGY-LWAHEHYGIFPDIMTLA--KPLAGGLPIGAALVTE 330 (451)
Q Consensus 263 ~~~~~~l~~l~~l~~~~------g~llI~DEv~tg~gr---~G~-~~~~~~~~~~pdi~t~s--K~lg~G~~iG~v~~~~ 330 (451)
.| +++|.++|+++ |+++++|-+|.|+-. .++ .+.+. ....|.++++ |.+.+...+|+++.++
T Consensus 203 dp----i~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~~~~~--~~~~DSis~s~HK~~~~P~g~G~l~~r~ 276 (431)
T TIGR01788 203 ED----VKALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDLEWDFR--LPRVKSINVSGHKYGLVYPGVGWVIWRD 276 (431)
T ss_pred CC----HHHHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCCchhhcC--CCCceEEEECchhccCCCCCcEEEEEeC
Confidence 88 99999999999 999999999986421 122 11111 1246778887 6543447788888765
Q ss_pred H--HHhhccCC--Cc-----cCCCCCcH--HHHHHHHHHHHHhcChHHHHH-------------HHhCCCCcceec--cc
Q 013008 331 K--VASAINYG--DH-----GSTFAGSP--LVCNAAIAVLDKISNPAFLAS-------------KLARNPHVKDVR--GL 384 (451)
Q Consensus 331 ~--i~~~~~~~--~~-----~~t~~~~~--~~~aaa~aal~~~~~~~~~~~-------------~~~~~~~~~~v~--g~ 384 (451)
+ +.+.+... .. ..++.++. ....+....|..+...++.+. .++..|.+.-+. ..
T Consensus 277 ~~~l~~~~~~~~~yl~~~~~~~t~~~sR~g~~al~~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~~~~el~~~~~~ 356 (431)
T TIGR01788 277 EEALPEELIFHVNYLGGDEPTFTLNFSRPANQVIAQYYNFLRLGREGYRKIMQNSLDVARYLAEEIAKLGPFEIISDGSG 356 (431)
T ss_pred hHHcchhheecccccCCCCCCcceecCchHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeCCCC
Confidence 3 32332110 00 11222221 122333444444433333322 233445333222 23
Q ss_pred ceeEEEEec------CChHHHHHHHHHCCceee----ecCC--CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 013008 385 GLIIGIEFD------VSATPVVDACRDSGLLVL----TAGK--GNVVRLVPPLIISEQELDQAVEILCKTLPVL 446 (451)
Q Consensus 385 G~~~~~~~~------~~~~~~~~~l~~~Gv~~~----~~~~--~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~ 446 (451)
..++.|.+. .+..++.+.|.++|+.+. |..- ...+|+.....++++.++++++.|.+++.++
T Consensus 357 ~~iV~Fr~~~~~~~~~~~~~l~~~L~~~G~~~~~~~~p~~~~~~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (431)
T TIGR01788 357 IPLVAFKLKDDADPGYTLYDLSHRLRERGWIVPAYTLPKNAEDIVVMRIVVREGFSRDLAELLIEDIEAALAYL 430 (431)
T ss_pred ceEEEEEeCCCCCCCcCHHHHHHHHHHCCCcccCCCCCCccCCeEEEEEEecCCCCHHHHHHHHHHHHHHHHhh
Confidence 445555553 245678999999998642 2211 1357988877889999999999999998765
No 320
>PRK04311 selenocysteine synthase; Provisional
Probab=99.50 E-value=1.2e-11 Score=125.33 Aligned_cols=297 Identities=16% Similarity=0.096 Sum_probs=172.2
Q ss_pred CCHHHHHHHHHHHhhccccc-C---CCCCHHHHHHHHHHhhccCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCC
Q 013008 115 GDADWIKAVVDQANVLTHVS-N---MYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPA 190 (451)
Q Consensus 115 ~~p~v~~a~~~~~~~~~~~~-~---~~~~~~~~~l~~~l~~~~~~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~ 190 (451)
-++++.+++.+.+..+.... . .........+++.++++++.+.++++++|+.|+..++..+. ++
T Consensus 98 l~~~v~eav~~~~~~~~~le~~l~~g~~g~r~~~~e~~lA~l~Gae~a~vv~sgtaAl~l~l~~l~------------~G 165 (464)
T PRK04311 98 LSEAAIEAVTEAARGYSNLEYDLATGKRGSRDRALAALLCALTGAEDALVVNNNAAAVLLALNALA------------AG 165 (464)
T ss_pred CCHHHHHHHHHHHhcccccccchhhcccchHHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHhC------------CC
Confidence 46889999998887643110 0 01123356889999999998889999999999998886532 57
Q ss_pred ceEEEEcC-Ccc-CChhh---hhhccCCCCcCCCCcCCCCCeeEeeC---CCHHHHHHhcCCCCeEEEEEccccCC--CC
Q 013008 191 TEFVSFTN-SFH-GRTMG---ALALTSKEHYRSPFEPVMPGVNFVEY---GNIEATRKLIQPGKTAAVFVEPIQGE--GG 260 (451)
Q Consensus 191 ~~ii~~~~-~yh-g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~---~d~~~le~~l~~~~~aavi~ep~~~~--~G 260 (451)
++||+.+. .|| |.... .+...| ..+.+++. .+++++++++.+ ++++|+++...+. .|
T Consensus 166 deVIvs~~e~~~~ggs~~i~~~~~~~G------------~~l~~v~~~~~t~~~dle~aI~~-~TklV~~vh~sN~~i~G 232 (464)
T PRK04311 166 KEVIVSRGELVEIGGAFRIPDVMRQAG------------ARLVEVGTTNRTHLRDYEQAINE-NTALLLKVHTSNYRIEG 232 (464)
T ss_pred CEEEEcchhhhhcCcchhhHHHHHHCC------------cEEEEECCCCCCCHHHHHHhcCc-cCeEEEEEcCCCccccc
Confidence 88998876 342 21110 111111 11223332 368899999975 4667666654332 33
Q ss_pred --ccccCHHHHHHHHHHHHHhCCEEEEeccccCCCc---c---cccccccccCCCcceeeec--ccccCCcccccccccH
Q 013008 261 --IYSATKEFLQFLRDACDDAGALLVFDEVQCGLGR---T---GYLWAHEHYGIFPDIMTLA--KPLAGGLPIGAALVTE 330 (451)
Q Consensus 261 --~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr---~---G~~~~~~~~~~~pdi~t~s--K~lg~G~~iG~v~~~~ 330 (451)
..++ +++|.++|++||+++|+|....-++- . +.....+......|++++| |.++|. ..|++++++
T Consensus 233 ~~~~~d----l~eI~~lak~~gi~vivD~gsG~l~~~~~~gl~~~p~~~~~l~~GaDiv~fSg~K~LgGp-~~G~i~g~~ 307 (464)
T PRK04311 233 FTKEVS----LAELAALGKEHGLPVVYDLGSGSLVDLSQYGLPDEPTVQELLAAGVDLVTFSGDKLLGGP-QAGIIVGKK 307 (464)
T ss_pred cCCcCC----HHHHHHHHHHcCCeEEEECCCcccccchhccCCCCCchhhHHhcCCcEEEecCcccccCC-ceEEEEEcH
Confidence 3345 99999999999999999995211211 1 1111122223468999988 999864 478888999
Q ss_pred HHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcC------------------hHHHHH------HHhCCC--C--ccee-
Q 013008 331 KVASAINYGDHGSTFAGSPLVCNAAIAVLDKISN------------------PAFLAS------KLARNP--H--VKDV- 381 (451)
Q Consensus 331 ~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~------------------~~~~~~------~~~~~~--~--~~~v- 381 (451)
++++.++.......+...-+..++..++|....+ +...++ .++.++ . +..+
T Consensus 308 ~li~~l~~~~~~r~lr~dk~~l~~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~ 387 (464)
T PRK04311 308 ELIARLKKHPLKRALRVDKLTLAALEATLRLYLDPEKLAEEIPTLRLLTRSPEELRARAERLAAALKAALGAAFAVEVVP 387 (464)
T ss_pred HHHHHHhhchhHHHHhcchHHHHHHHHHHHHHhChhhhhhhCcHHHHhcCCHHHHHHHHHHHHHHHHhccCCCeeEEEEE
Confidence 9988776322222222233444444445542211 111111 222221 1 1111
Q ss_pred ----ccccee-------EEEEec---CChHHHHHHHHHC--CceeeecCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q 013008 382 ----RGLGLI-------IGIEFD---VSATPVVDACRDS--GLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTLP 444 (451)
Q Consensus 382 ----~g~G~~-------~~~~~~---~~~~~~~~~l~~~--Gv~~~~~~~~~~iri~~~~~~t~e~i~~~l~~l~~~l~ 444 (451)
-|.|.+ +.+.++ ....++.+.|++- .|+.+.. . +.+.+-+ -++.++|++.++++|.+++.
T Consensus 388 ~~~~~gggs~p~~~~~~~~v~~~~~~~~~~~l~~~lr~~~~~i~~r~~-~-~~~~ld~-r~~~~~~~~~~~~~~~~~~~ 463 (464)
T PRK04311 388 SFSQVGGGSLPVDRLPSAAVTLTPKDRSLEALAARLRLLPPPVIGRIE-D-GRLLLDL-RTLEEEDEERLAAALLEALN 463 (464)
T ss_pred ccCccCCCCCcCCCCCeEEEEEeCCCCCHHHHHHHHhcCCCCEEEEEE-C-CEEEEEe-CcCCHHHHHHHHHHHHHHhh
Confidence 122332 223332 2467788888763 4555432 2 4455553 36688999999999988763
No 321
>PLN03032 serine decarboxylase; Provisional
Probab=99.50 E-value=1.3e-11 Score=121.76 Aligned_cols=267 Identities=17% Similarity=0.145 Sum_probs=164.4
Q ss_pred HHHHHHHHhhccC--CCeE--EecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcC
Q 013008 142 QIELAKRLVACSF--ADRV--FFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYR 217 (451)
Q Consensus 142 ~~~l~~~l~~~~~--~e~v--~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~ 217 (451)
..++.+++++.++ .+.+ +||+||||||..|+..+|.+. ++ .+++....-|-+..-+....+...
T Consensus 68 e~~v~~~ia~llg~~~~~~~G~fTsGGTEaNl~al~~ar~~~---------~~-~~vi~s~~~H~Sv~kaa~~lg~~~-- 135 (374)
T PLN03032 68 EVGVLDWFARLWELEKDEYWGYITTCGTEGNLHGILVGREVF---------PD-GILYASRESHYSVFKAARMYRMEA-- 135 (374)
T ss_pred HHHHHHHHHHHhCCCCccCCEEEeCchHHHHHHHHHHHHHhC---------CC-cEEEeCCCceeHHHHHHHHcCCCC--
Confidence 6677788888887 3444 999999999999999988542 12 367778888877766654433221
Q ss_pred CCCcCCCCCeeEeeCCCHHHHHHhcCCC--CeEEEEEccccCCCCccccCHHHHHHHHHHHHHhC-----CEEEEecccc
Q 013008 218 SPFEPVMPGVNFVEYGNIEATRKLIQPG--KTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAG-----ALLVFDEVQC 290 (451)
Q Consensus 218 ~~~~~~~~~~~~~~~~d~~~le~~l~~~--~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g-----~llI~DEv~t 290 (451)
...|..+.... |+++|+++|+++ .+.+|++.-.+++.|.+-| +++|.++|++|| +++++|-++.
T Consensus 136 -~~V~~d~~g~i----d~~~L~~~i~~~~~~~~lvv~tagtt~tG~idp----i~eI~~i~~~~g~~~~~~~lHvDaA~g 206 (374)
T PLN03032 136 -VKVPTLPSGEI----DYDDLERALAKNRDKPAILNVNIGTTVKGAVDD----LDRILRILKELGYTEDRFYIHCDGALF 206 (374)
T ss_pred -eEeeeCCCCcC----cHHHHHHHHHHcCCCCEEEEEEecCcCCccCCC----HHHHHHHHHHhCCCCCCeeEEEEccch
Confidence 01122221111 899999999742 4667777666777888877 999999999997 5899999996
Q ss_pred CCCccc-----ccccccccCCCcceeeec--ccccCCcccccccccHHHHhhccCC-----CccCCCCCc--HHHHHHHH
Q 013008 291 GLGRTG-----YLWAHEHYGIFPDIMTLA--KPLAGGLPIGAALVTEKVASAINYG-----DHGSTFAGS--PLVCNAAI 356 (451)
Q Consensus 291 g~gr~G-----~~~~~~~~~~~pdi~t~s--K~lg~G~~iG~v~~~~~i~~~~~~~-----~~~~t~~~~--~~~~aaa~ 356 (451)
|+ ..- ..+.+ ....|.++++ |.++...++|+++.+++..+.+... ..-.|..++ ....++..
T Consensus 207 g~-~~p~~~~~~~~~~---~~~vDSis~s~HK~~g~P~g~G~ll~r~~~~~~~~~~~~Yl~~~d~ti~gSR~g~~~l~~w 282 (374)
T PLN03032 207 GL-MMPFVSRAPEVTF---RKPIGSVSVSGHKFLGCPMPCGVALTRKKHVKALSQNVEYLNSRDATIMGSRNGHAPLYLW 282 (374)
T ss_pred hh-hhhccCCCcccCC---CcCCcEEEECcccccCCCcCeEEEEEEchhhHhhccCCcccCCCCCcccCCCchHHHHHHH
Confidence 53 110 01111 1247878877 6555457889999988776655321 111234343 34556666
Q ss_pred HHHHHhcChHHHHH-------------HHhCCCCcceecccceeEEEEecCChHHHHHHHHHCCceeeecCCCCEEEEeC
Q 013008 357 AVLDKISNPAFLAS-------------KLARNPHVKDVRGLGLIIGIEFDVSATPVVDACRDSGLLVLTAGKGNVVRLVP 423 (451)
Q Consensus 357 aal~~~~~~~~~~~-------------~~~~~~~~~~v~g~G~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~iri~~ 423 (451)
++|..+-.+++.+. .++..+......+..+.+.|. .+..+ . ..+|..+.+.. +.+++..
T Consensus 283 ~~l~~~G~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~p~~~~V~f~--~~~~~---~-~~~~w~l~~~~--~~~hi~v 354 (374)
T PLN03032 283 YTLRRKGYRGIKRDVQHCMRNAHYLKDRLTEAGLTCRLNELSSTVVFE--RPMDE---A-FIKKWQLACEG--DIAHVVV 354 (374)
T ss_pred HHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEECCCceEEEEc--CCCcH---h-HhheeeecccC--CEEEEEE
Confidence 77777666655444 112222111122233333222 22111 1 23576665433 4688877
Q ss_pred CCCCCHHHHHHHHHHHHH
Q 013008 424 PLIISEQELDQAVEILCK 441 (451)
Q Consensus 424 ~~~~t~e~i~~~l~~l~~ 441 (451)
...++++.+|++++.|++
T Consensus 355 m~~~~~~~id~fi~dl~~ 372 (374)
T PLN03032 355 MPNVTVEKLDEFVEELVE 372 (374)
T ss_pred CCCCCHHHHHHHHHHHhc
Confidence 777889999999988764
No 322
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.49 E-value=2.5e-11 Score=130.14 Aligned_cols=281 Identities=17% Similarity=0.193 Sum_probs=176.8
Q ss_pred HHHHHHHHhhccCCCe-EEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCC
Q 013008 142 QIELAKRLVACSFADR-VFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPF 220 (451)
Q Consensus 142 ~~~l~~~l~~~~~~e~-v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~ 220 (451)
..++.++|++++|.+. .++.++|+.|...++.++|.|+..++.. .|+ +++...+-||+...+....|..
T Consensus 532 i~elq~~l~eltGmd~~Sl~p~aGA~gE~agL~aiR~y~~~rge~---~R~-~vlip~saHgtnPasa~~~G~~------ 601 (939)
T TIGR00461 532 IAQLEKWLCSITGFDAISLQPNSGAQGEYAGLRVIRSYHESRGEN---HRN-ICLIPVSAHGTNPASAAMAGMQ------ 601 (939)
T ss_pred HHHHHHHHHHHHCCCCcccCCchHHHHHHHHHHHHHHHHHhcCCC---CCC-EEEEEccccCcCHHHHHHCCCE------
Confidence 6789999999999664 4556778888888898899887554432 244 4445567788876554443321
Q ss_pred cCCCCCeeEeeCC-----CHHHHHHhcCC--CCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccC-C
Q 013008 221 EPVMPGVNFVEYG-----NIEATRKLIQP--GKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCG-L 292 (451)
Q Consensus 221 ~~~~~~~~~~~~~-----d~~~le~~l~~--~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg-~ 292 (451)
++.++.+ |+++|++++++ .++++|++.-.+.. |.+.++ +++|.++|+++|.++++|-++.. .
T Consensus 602 ------Vv~V~~d~~G~iDle~L~~~i~~~~~~taaV~iT~pst~-G~~e~~---I~eI~~iah~~G~~v~VDgAq~~al 671 (939)
T TIGR00461 602 ------VVPVNCDQDGNIDLVDLKNKAEQHGDELAAVMVTYPSTH-GVFEPT---IQHACDIVHSFGGQVYLDGANMNAQ 671 (939)
T ss_pred ------EEEeccCCCCCcCHHHHHHHHhhcCCceEEEEEEeCCcC-ceeccc---HHHHHHHHHHcCCEEEEEecChhhC
Confidence 2223321 89999999973 46777777554444 544332 89999999999999999999853 2
Q ss_pred CcccccccccccCCCcceeeec--cccc-----CCcccccccccHHHHhhccCCC----------------ccCCCCCcH
Q 013008 293 GRTGYLWAHEHYGIFPDIMTLA--KPLA-----GGLPIGAALVTEKVASAINYGD----------------HGSTFAGSP 349 (451)
Q Consensus 293 gr~G~~~~~~~~~~~pdi~t~s--K~lg-----~G~~iG~v~~~~~i~~~~~~~~----------------~~~t~~~~~ 349 (451)
+.. ...-....|+++++ |+|+ ||-.+|++.+++++...+.... ....+.++.
T Consensus 672 ~~l-----~~Pg~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr~~L~~~lPg~~v~~t~d~~greq~Iga~s~~~~g~a 746 (939)
T TIGR00461 672 VGL-----TSPGDLGADVCHLNLHKTFCIPHGGGGPGMGPIGVKSHLIPFLPKHDVVSMITGIGGSKSIGSVSAAPYGSA 746 (939)
T ss_pred CCC-----CCccccCCCEEEecCCccCCCCCCCCCCCeEEEEEhhhchhhcCCCcccccccCCCCccccccccccccCcH
Confidence 111 11112457888875 9887 4567789988887665442110 011133444
Q ss_pred HHHHHHHHHHHHhcChHHHHH----------HHhCC---CCcceecc-cce-e--EEEEec-------CChHHHHHHHHH
Q 013008 350 LVCNAAIAVLDKISNPAFLAS----------KLARN---PHVKDVRG-LGL-I--IGIEFD-------VSATPVVDACRD 405 (451)
Q Consensus 350 ~~~aaa~aal~~~~~~~~~~~----------~~~~~---~~~~~v~g-~G~-~--~~~~~~-------~~~~~~~~~l~~ 405 (451)
+.+..+...|..+-.+++.+. +.+++ ..+. .++ .|. + +.+++. ....++.++|++
T Consensus 747 ~~~l~a~~yi~~lG~~GL~~~a~~ailnAnYl~~rL~~~~~~l-~~~~~~~~~hEfv~~~~~~~~~~g~~~~dIakrL~d 825 (939)
T TIGR00461 747 SILPISWMYIKMMGNEGLPKASVVAILNANYMATRLKDHYPIL-FVGTLKHVAHECILDLRPLKAKTGIEAIDVAKRLQD 825 (939)
T ss_pred HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHhhccCccc-ccCCCCceeEEEEEeccchhhhcCCCHHHHHHHHHh
Confidence 444555555665544444332 22222 1111 111 122 1 223332 356889999999
Q ss_pred CCceeeecCC--CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHhh
Q 013008 406 SGLLVLTAGK--GNVVRLVPPLIISEQELDQAVEILCKTLPVLDS 448 (451)
Q Consensus 406 ~Gv~~~~~~~--~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~~~ 448 (451)
.|+....... .+.+.+.|.-..+++|||++++++.+..+++++
T Consensus 826 ~G~hapt~~~pv~g~lmiepTE~eskeelD~f~~al~~I~~e~~~ 870 (939)
T TIGR00461 826 YGFHAPTLSFPVPGTLMVEPTESESLEELDRFCDAMIAIKEEINA 870 (939)
T ss_pred CCeeccccCCccCCeEEEEeeccCCHHHHHHHHHHHHHHHHHHHH
Confidence 9987543221 136788889999999999999999988887765
No 323
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.49 E-value=3e-12 Score=129.22 Aligned_cols=164 Identities=18% Similarity=0.156 Sum_probs=112.5
Q ss_pred cCCCCCHHHHHHHHHHhhccCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCC
Q 013008 134 SNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK 213 (451)
Q Consensus 134 ~~~~~~~~~~~l~~~l~~~~~~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~ 213 (451)
+....++...++++++++..+.+..++++||+.|+.+++..+. .++|+||+.+..|++.........
T Consensus 63 Y~r~~~pt~~~le~~la~l~g~~~~v~fsSG~~Ai~~al~~ll-----------~~Gd~VI~~~~~y~~t~~~~~~~l-- 129 (437)
T PRK05613 63 YSRLTNPTVEALENRIASLEGGVHAVAFASGQAAETAAILNLA-----------GAGDHIVTSPRLYGGTETLFLVTL-- 129 (437)
T ss_pred eeCccChHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHhc-----------CCCCEEEECCCccHHHHHHHHHHH--
Confidence 3445667788999999999988888888999999998887553 158899998888766522111100
Q ss_pred CCcCCCCcCCCCCeeEee-CCCHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCC
Q 013008 214 EHYRSPFEPVMPGVNFVE-YGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGL 292 (451)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~-~~d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~ 292 (451)
......+.+++ .+|++++++++.+ ++++|++|...++.|.+.+ +++|.++|+++|+++|+|.+++ .
T Consensus 130 -------~~~Gi~v~~vd~~~d~e~l~~~l~~-~tk~V~~e~~~Np~~~v~d----i~~I~~la~~~gi~livD~t~a-~ 196 (437)
T PRK05613 130 -------NRLGIEVTFVENPDDPESWQAAVQP-NTKAFFGETFANPQADVLD----IPAVAEVAHRNQVPLIVDNTIA-T 196 (437)
T ss_pred -------HhcCeEEEEECCCCCHHHHHHhCCc-cCeEEEEECCCCCCCcccC----HHHHHHHHHHcCCeEEEECCCc-c
Confidence 01112344554 3489999999975 4778888877666677777 9999999999999999999984 2
Q ss_pred CcccccccccccCCCcceeeec--ccccC-Cccc-ccccc
Q 013008 293 GRTGYLWAHEHYGIFPDIMTLA--KPLAG-GLPI-GAALV 328 (451)
Q Consensus 293 gr~G~~~~~~~~~~~pdi~t~s--K~lg~-G~~i-G~v~~ 328 (451)
|.. .....+| .|++++| |.++| |-.+ |.++.
T Consensus 197 g~~---~~p~~~G--aDivv~S~~K~l~G~gd~~gG~vv~ 231 (437)
T PRK05613 197 AAL---VRPLELG--ADVVVASLTKFYTGNGSGLGGVLID 231 (437)
T ss_pred ccc---cChHHhC--CCEEEeeccceecCCCcceeEEEEe
Confidence 211 1111234 5777654 98886 5333 44443
No 324
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.49 E-value=4.8e-12 Score=125.63 Aligned_cols=227 Identities=12% Similarity=0.177 Sum_probs=145.0
Q ss_pred ccCCCCCHHHHHHHHHHhhccCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccC
Q 013008 133 VSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTS 212 (451)
Q Consensus 133 ~~~~~~~~~~~~l~~~l~~~~~~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~ 212 (451)
.|....++...+|+++++++.+.+.++.++||+.|+.+++..+. .++|+||+....|.+........-
T Consensus 57 ~Y~r~~~P~~~~lE~~la~leg~~~av~~sSG~aAi~~al~all-----------~~GD~Vl~~~~~yg~t~~~~~~~~- 124 (384)
T PRK06434 57 IYTRWGNPTVQAFEEKYAVLENAEHALSFSSGMGAITSAILSLI-----------KKGKRILSISDLYGQTFYFFNKVL- 124 (384)
T ss_pred ceeCCCChhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHHh-----------CCCCEEEEecCccchHHHHHHHHH-
Confidence 34555677789999999999998899999999999999998654 168999998887755543221110
Q ss_pred CCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCC
Q 013008 213 KEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGL 292 (451)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~ 292 (451)
......+.+++.++.+.++ +++.++++|++|.+.++.+.+++ +++|.++|++++ +++|.++..
T Consensus 125 --------~~~Gi~v~fvd~~~~~~~~--l~~~~tklv~~e~~snpt~~v~D----i~~I~~la~~~~--lvVD~t~~s- 187 (384)
T PRK06434 125 --------KTLGIHVDYIDTDRLNSLD--FDPSNYDLIYAESITNPTLKVPD----IKNVSSFCHEND--VIVDATFAS- 187 (384)
T ss_pred --------HhcCcEEEEECCCChhhee--ecCCCeeEEEEEcCCCCCceeec----HHHHHHHHHHcC--eEEECCCCC-
Confidence 0111234555554445544 44556889999988777776666 999999999998 456999731
Q ss_pred CcccccccccccCCCcceeeec--ccccC-C-cccccccc-cHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcC--h
Q 013008 293 GRTGYLWAHEHYGIFPDIMTLA--KPLAG-G-LPIGAALV-TEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISN--P 365 (451)
Q Consensus 293 gr~G~~~~~~~~~~~pdi~t~s--K~lg~-G-~~iG~v~~-~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~--~ 365 (451)
...+ ...+...|++++| |.++| | .-.|+++. ++++.+.++..........+|+.++.++.-|+.+.. +
T Consensus 188 ~~~~-----~pl~~gaDivv~S~tK~i~G~~d~~gG~vv~~~~~~~~~~~~~~~~~G~~~~~~~A~l~~~gL~tL~~R~~ 262 (384)
T PRK06434 188 PYNQ-----NPLDLGADVVIHSATKYISGHSDVVMGVAGTNNKSIFNNLVERRKTLGSNPDPIQAYLALRGLKTLGLRME 262 (384)
T ss_pred cccC-----CchhcCCCEEEeecccccCCCCCceEEEEecCcHHHHHHHHHHHHhcCCCCCHHHHHHHHhCCCcHHHHHH
Confidence 1222 2234557888766 99976 4 55677766 456666554221122234467776666555543311 0
Q ss_pred ------HHHHHHHhCCCCccee------------cccceeEEEEec
Q 013008 366 ------AFLASKLARNPHVKDV------------RGLGLIIGIEFD 393 (451)
Q Consensus 366 ------~~~~~~~~~~~~~~~v------------~g~G~~~~~~~~ 393 (451)
..+.+.++.+|.+..| +|.|.++.|+++
T Consensus 263 r~~~~a~~~a~~L~~~p~v~~V~yPgl~~~~~~~~g~g~~~sf~l~ 308 (384)
T PRK06434 263 KHNKNGMELARFLRDSKKISNVYYPDTEIGKKVLRGFGGMLSFELR 308 (384)
T ss_pred HHHHHHHHHHHHHHcCCCccEEECCChHHHHHhcCCCCceEEEEEC
Confidence 1111155667755432 356889999985
No 325
>PRK02769 histidine decarboxylase; Provisional
Probab=99.48 E-value=2.9e-11 Score=120.05 Aligned_cols=272 Identities=13% Similarity=0.149 Sum_probs=169.3
Q ss_pred HHHHHHHHHhhccCC--Ce--EEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCc
Q 013008 141 PQIELAKRLVACSFA--DR--VFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHY 216 (451)
Q Consensus 141 ~~~~l~~~l~~~~~~--e~--v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~ 216 (451)
...++.++++++++. +. .+||+||||||..|+..+|.+. +++ .|+....-|.+..-+...-+....
T Consensus 66 ~e~~~~~~~a~l~g~~~~~~~G~~TsGgTean~~a~~~ar~~~---------~~~-~ii~s~~~H~Sv~ka~~~lg~~~~ 135 (380)
T PRK02769 66 FERDVMNFFAELFKIPFNESWGYITNGGTEGNLYGCYLARELF---------PDG-TLYYSKDTHYSVSKIARLLRIKSR 135 (380)
T ss_pred HHHHHHHHHHHHhCCCCCCCCEEEecChHHHHHHHHHHHHHhC---------CCc-EEEeCCCceehHHHHHHHcCCCCc
Confidence 356777788888872 33 5899999999999998888542 234 455556667666555443332211
Q ss_pred CCCCcCCCCCeeEeeCCCHHHHHHhcCCC--CeEEEEEccccCCCCccccCHHHHHHHHHHHHHhC---CEEEEeccccC
Q 013008 217 RSPFEPVMPGVNFVEYGNIEATRKLIQPG--KTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAG---ALLVFDEVQCG 291 (451)
Q Consensus 217 ~~~~~~~~~~~~~~~~~d~~~le~~l~~~--~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g---~llI~DEv~tg 291 (451)
. .+..+... -|+++|++++++. .+.+|++.-..++.|.+.| +++|.++|++|| +++++|-+|.|
T Consensus 136 ~---V~~~~~g~----id~~~L~~~i~~~~~~t~lvv~t~gtt~tG~idp----i~~I~~i~~~~g~~~~~lHVDaA~gg 204 (380)
T PRK02769 136 V---ITSLPNGE----IDYDDLISKIKENKNQPPIIFANIGTTMTGAIDN----IKEIQEILKKIGIDDYYIHADAALSG 204 (380)
T ss_pred e---eccCCCCc----CcHHHHHHHHHhCCCCcEEEEEEeCCCCCcccCC----HHHHHHHHHHhCCCceEEEEEecccc
Confidence 1 11111111 2899999999743 4677778778888898888 999999999998 69999999976
Q ss_pred CCcc---c-ccccccccCCCcceeeec--ccccCCcccccccccHHHHhhccCC-----CccCCCCC--cHHHHHHHHHH
Q 013008 292 LGRT---G-YLWAHEHYGIFPDIMTLA--KPLAGGLPIGAALVTEKVASAINYG-----DHGSTFAG--SPLVCNAAIAV 358 (451)
Q Consensus 292 ~gr~---G-~~~~~~~~~~~pdi~t~s--K~lg~G~~iG~v~~~~~i~~~~~~~-----~~~~t~~~--~~~~~aaa~aa 358 (451)
+-.. . ..+.+. . ..|.++++ |.+++..++|+++.+++..+.+.+. ....|+.| |....++..++
T Consensus 205 ~~~p~~~~~~~~d~~--~-~vDsis~s~HK~~~~P~g~G~l~~r~~~~~~~~~~~~yl~~~d~t~~GSR~g~~~l~lw~a 281 (380)
T PRK02769 205 MILPFVNNPPPFSFA--D-GIDSIAISGHKFIGSPMPCGIVLAKKKYVERISVDVDYIGSRDQTISGSRNGHTALLLWAA 281 (380)
T ss_pred eeecccCccccCCcc--C-CCCEEEECCcccCCCCCCcEEEEEehhhhhhcccCccccCCCCCCccCCCCcHHHHHHHHH
Confidence 4111 0 011111 1 57888887 7665558899999988776655321 11123333 34566777788
Q ss_pred HHHhcChHHHHH----------HHhCCC--Ccce-ecccceeEEEEecCChHHHHHHHHHCCceeeecCCCCEEEEeCCC
Q 013008 359 LDKISNPAFLAS----------KLARNP--HVKD-VRGLGLIIGIEFDVSATPVVDACRDSGLLVLTAGKGNVVRLVPPL 425 (451)
Q Consensus 359 l~~~~~~~~~~~----------~~~~~~--~~~~-v~g~G~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~iri~~~~ 425 (451)
|+.+..+++.+. +.+++. .+.. ..+....+. |......+. +|..+.+.+ ..+++....
T Consensus 282 L~~lg~~G~~~~~~~~~~la~~l~~~L~~~g~~~~~~p~~~~v~--f~~~~~~~~-----~~w~l~~~~--~~~hi~~~~ 352 (380)
T PRK02769 282 IRSLGSKGLRQRVQHCLDMAQYAVDRLQANGIPAWRNPNSITVV--FPCPSERIW-----KKWHLATSG--NQAHIITMP 352 (380)
T ss_pred HHHHCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEcCCCceEEE--EcCCCHHHH-----hCeeEcccC--CEEEEEECC
Confidence 887766655443 111111 1111 122223333 322223332 676666543 468888888
Q ss_pred CCCHHHHHHHHHHHHHHHHH
Q 013008 426 IISEQELDQAVEILCKTLPV 445 (451)
Q Consensus 426 ~~t~e~i~~~l~~l~~~l~~ 445 (451)
.+++|.+|++++.|.+.+..
T Consensus 353 ~~~~~~~~~f~~dl~~~~~~ 372 (380)
T PRK02769 353 HHNKQQIDSLIDELIFDLKN 372 (380)
T ss_pred CCCHHHHHHHHHHHHHHHhc
Confidence 88999999999999887763
No 326
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.48 E-value=1.3e-11 Score=131.45 Aligned_cols=279 Identities=16% Similarity=0.168 Sum_probs=172.6
Q ss_pred HHHHHHHHhhccCCCeEEecC-CHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCC
Q 013008 142 QIELAKRLVACSFADRVFFSN-TGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPF 220 (451)
Q Consensus 142 ~~~l~~~l~~~~~~e~v~~~~-sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~ 220 (451)
..+|.+.+++++|.+.+.+.+ ||+.|..+++.+.|.|+..++.. .|++||+. .+-||.........|..
T Consensus 545 i~elq~~l~eLtGmd~~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~---~r~~vLIp-~saHgtNpasa~~~Gie------ 614 (954)
T PRK12566 545 IDELEAWLCAITGFDAICMQPNSGAQGEYAGLLAIRRYHRSRGQS---QRDICLIP-SSAHGTNPASAQMAGMR------ 614 (954)
T ss_pred HHHHHHHHHHHHCCCeEeecCCchHHHHHHHHHHHHHHHHhcCCC---CCCEEEec-ccccccCHHHHHHCCCE------
Confidence 568889999999988777776 89999989999999988766653 35555554 47777765543333221
Q ss_pred cCCCCCeeEeeC-----CCHHHHHHhcC--CCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCC
Q 013008 221 EPVMPGVNFVEY-----GNIEATRKLIQ--PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLG 293 (451)
Q Consensus 221 ~~~~~~~~~~~~-----~d~~~le~~l~--~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~g 293 (451)
++.++. -|+++|+++++ +.++++|++...+..++.. +.+++|.++|+++|+++++|-++. .+
T Consensus 615 ------Vv~Vp~D~~G~iDle~L~a~I~~~~~~laaVmiT~Pnt~Gv~e----~~V~eI~~iah~~Galv~vDgA~~-~a 683 (954)
T PRK12566 615 ------VVIVECDPDGNVDLDDLKAKAAAAGDRLSCLMITYPSTHGVYE----EGIREICEVVHQHGGQVYMDGANL-NA 683 (954)
T ss_pred ------EEEeccCCCCCcCHHHHHHHhhccCCCEEEEEEEecCcCceec----chHHHHHHHHHHcCCEEEEEeeCh-hh
Confidence 222222 18999999996 3467777665544444322 339999999999999999999985 21
Q ss_pred cccccccccccCCCcceeeec--cccc----CC-cccccccccHHHHhhccCCC-------------ccCCCCCcHHHHH
Q 013008 294 RTGYLWAHEHYGIFPDIMTLA--KPLA----GG-LPIGAALVTEKVASAINYGD-------------HGSTFAGSPLVCN 353 (451)
Q Consensus 294 r~G~~~~~~~~~~~pdi~t~s--K~lg----~G-~~iG~v~~~~~i~~~~~~~~-------------~~~t~~~~~~~~a 353 (451)
-.+ .-... .+..|+++++ |.|+ +| .-+|.+.+++++...+.... ......++.+...
T Consensus 684 ~~~-l~~Pg--~~GADi~~~s~HKtf~~P~G~GGP~vG~iav~~~L~pfLp~~P~~d~~G~~~r~ga~S~~~~gsa~~l~ 760 (954)
T PRK12566 684 QVG-LARPA--DIGADVSHMNLHKTFCIPHGGGGPGMGPIGVRAHLAPFVANHPVVPVEGPDPNNGAVSAAPWGSASILP 760 (954)
T ss_pred ccC-CCChh--hcCCCEEEecCCcccCcCccCCCCccchhhhhhhhhhhccCCCCcCCCCCCCCCCceeecccchHHHHH
Confidence 111 00111 2457888776 9875 23 55777777776665554210 1112223333334
Q ss_pred HHHHHHHHhcChHHHHH--------------HHhCCCCcceecc-cce-e--EEEEec-------CChHHHHHHHHHCCc
Q 013008 354 AAIAVLDKISNPAFLAS--------------KLARNPHVKDVRG-LGL-I--IGIEFD-------VSATPVVDACRDSGL 408 (451)
Q Consensus 354 aa~aal~~~~~~~~~~~--------------~~~~~~~~~~v~g-~G~-~--~~~~~~-------~~~~~~~~~l~~~Gv 408 (451)
++..-+..+-.+ +.+. +.+.++.. . .+ .+. + +.+.+. .+..++.++|++.|+
T Consensus 761 ~A~~Yi~~lG~e-Lk~aa~~ailnAnYla~rL~~~~~v~-~-~~~~~~~~hEfii~~~~l~~~~g~~~~dvakRL~d~Gi 837 (954)
T PRK12566 761 ISWMYIAMMGPQ-LADASEVAILSANYLANQLGGAFPVL-Y-RGRNERVAHECILDLRPLKAQTGISEEDVAKRLMDYGF 837 (954)
T ss_pred HHHHHHHHHCHH-HHHHHHHHHHHHHHHHHHhHhhCCCC-c-CCCCCCeeeEEEEEccccccccCCCHHHHHHHHHHCCc
Confidence 444444443222 2221 22222211 1 21 111 1 222221 345779999999998
Q ss_pred eeeecC--CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHh
Q 013008 409 LVLTAG--KGNVVRLVPPLIISEQELDQAVEILCKTLPVLD 447 (451)
Q Consensus 409 ~~~~~~--~~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~~ 447 (451)
...... ..+.+|++|.-..+++|||+++++|.++.++++
T Consensus 838 hapt~~fPv~~~LmIepTE~eskeEIDrf~eAL~~I~~e~~ 878 (954)
T PRK12566 838 HAPTMSFPVPGTLMVEPTESESKAELDRFVEAMLSIRAEIG 878 (954)
T ss_pred EEeEEeeccCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHHH
Confidence 764221 136799999999999999999999999988865
No 327
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.47 E-value=2.5e-12 Score=124.44 Aligned_cols=196 Identities=16% Similarity=0.146 Sum_probs=142.4
Q ss_pred cCCCCCHHHHHHHHHHhhccCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCC
Q 013008 134 SNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK 213 (451)
Q Consensus 134 ~~~~~~~~~~~l~~~l~~~~~~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~ 213 (451)
+....++....|++.+++..+.+.++.++||..|+..|++.+. +.+++||.++..|.|..........
T Consensus 71 Ysr~~nPt~~~le~~iaal~ga~~~l~fsSGmaA~~~al~~L~-----------~~g~~iV~~~~~Y~gT~~~l~~~~~- 138 (409)
T KOG0053|consen 71 YSRSGNPTRDVLESGIAALEGAAHALLFSSGMAAITVALLHLL-----------PAGDHIVATGDVYGGTLRILRKFLP- 138 (409)
T ss_pred cccCCCCchHHHHHHHHHHhCCceEEEecccHHHHHHHHHHhc-----------CCCCcEEEeCCCcccHHHHHHHHHH-
Confidence 3445566688899999999998889999999999999999777 2588999999999876433221111
Q ss_pred CCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCC
Q 013008 214 EHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLG 293 (451)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~g 293 (451)
.......+++.+|++.+++.+++ ++.+|++|.+-++...++. +++|+++|+++|+++|+|+...+.
T Consensus 139 --------~~gie~~~vd~~~~~~~~~~i~~-~t~~V~~ESPsNPll~v~D----I~~l~~la~~~g~~vvVDnTf~~p- 204 (409)
T KOG0053|consen 139 --------KFGGEGDFVDVDDLKKILKAIKE-NTKAVFLESPSNPLLKVPD----IEKLARLAHKYGFLVVVDNTFGSP- 204 (409)
T ss_pred --------HhCceeeeechhhHHHHHHhhcc-CceEEEEECCCCCcccccc----HHHHHHHHhhCCCEEEEeCCcCcc-
Confidence 01123345666678888888876 7999999998777666565 999999999999999999998643
Q ss_pred cccccccccccCCCcceee--ecccccC-C-ccccccccc-HHHHhhccCCCccCCCCCcHHHHHHHHHHHH
Q 013008 294 RTGYLWAHEHYGIFPDIMT--LAKPLAG-G-LPIGAALVT-EKVASAINYGDHGSTFAGSPLVCNAAIAVLD 360 (451)
Q Consensus 294 r~G~~~~~~~~~~~pdi~t--~sK~lg~-G-~~iG~v~~~-~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~ 360 (451)
..++.+.+..||++ ..|.++| + +-.|.++.+ +++...+......-.+..+|+.|.-....++
T Consensus 205 -----~~~~pL~lGADIV~hSaTKyi~Ghsdvi~G~iv~n~~~~~~~l~~~~~~lg~~~~p~~~~ll~Rglk 271 (409)
T KOG0053|consen 205 -----YNQDPLPLGADIVVHSATKYIGGHSDVIGGSVVLNSEELASRLKFLQEDLGWCEDPFDLFLLSRGLK 271 (409)
T ss_pred -----cccChhhcCCCEEEEeeeeeecCCcceeeeEEecCcHHHHHHHHHHHHHhcCCCCHHHHHHHhcCcc
Confidence 12344445588885 5599998 4 677888886 7777766543333445567877766654444
No 328
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.47 E-value=2.8e-11 Score=122.32 Aligned_cols=194 Identities=14% Similarity=0.054 Sum_probs=125.7
Q ss_pred CCHHHHHHHHHHHhhccccc----CCCCCHHHHHHHHHHhhccCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCC
Q 013008 115 GDADWIKAVVDQANVLTHVS----NMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPA 190 (451)
Q Consensus 115 ~~p~v~~a~~~~~~~~~~~~----~~~~~~~~~~l~~~l~~~~~~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~ 190 (451)
-++++.+++.+.++.+.... ..........+++.++++++.+..++++||+.|+..++..+. ++
T Consensus 93 l~~~vieAv~~~~~~y~~l~~~l~~g~~g~r~~~le~~lA~l~gae~alvv~sg~aAi~l~l~~l~------------~G 160 (454)
T TIGR00474 93 LAEEAIEAVTDAARGYSNLEYDLETGKRGSRYSHVEGLLCELTGAEDALVVNNNAAAVLLALNTLA------------KG 160 (454)
T ss_pred CCHHHHHHHHHHHhcccchhccccccccchHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHhC------------Cc
Confidence 57899999999887643110 011223367899999999998888889999999988885432 58
Q ss_pred ceEEEEcCCc---cCChhh--hhhccCCCCcCCCCcCCCCCeeEeeC---CCHHHHHHhcCCCCeEEEEEccccC--CCC
Q 013008 191 TEFVSFTNSF---HGRTMG--ALALTSKEHYRSPFEPVMPGVNFVEY---GNIEATRKLIQPGKTAAVFVEPIQG--EGG 260 (451)
Q Consensus 191 ~~ii~~~~~y---hg~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~---~d~~~le~~l~~~~~aavi~ep~~~--~~G 260 (451)
++||+.+..+ .|.... .+...| ..+.+++. .|++++++++.+ ++++|+++...+ ..|
T Consensus 161 deVIvs~~e~v~~ggs~~i~~~~~~~G------------~~~~~v~~~~~~~l~dle~aI~~-~T~lv~~~h~sN~~~~G 227 (454)
T TIGR00474 161 KEVIVSRGELVEIGGSFRIPDVMEQSG------------AKLVEVGTTNRTHLKDYEDAITE-NTALLLKVHTSNYRIVG 227 (454)
T ss_pred CEEEECCChhhhhcchhhHHHHHHHcC------------CEEEEeCCCCCCCHHHHHHhcCc-CCEEEEEEccCcccccC
Confidence 8898887663 232111 111111 12233333 478999999975 466666665433 234
Q ss_pred --ccccCHHHHHHHHHHHHHhCCEEEEeccccCCCccc------ccccccccCCCcceeeec--ccccCCcccccccccH
Q 013008 261 --IYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTG------YLWAHEHYGIFPDIMTLA--KPLAGGLPIGAALVTE 330 (451)
Q Consensus 261 --~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G------~~~~~~~~~~~pdi~t~s--K~lg~G~~iG~v~~~~ 330 (451)
..++ +++|.++|++||+++|+|....-++-.+ ....++......|++++| |.++|. ..|++++++
T Consensus 228 ~~~~~d----l~~I~~la~~~g~~vivD~~sG~l~~~~~~gl~~~p~~~~~~~~GaDiv~fSg~K~LgGp-~~G~i~g~~ 302 (454)
T TIGR00474 228 FTEEVS----IAELVALGREHGLPVMEDLGSGSLVDLSRYGLPDEPTVQEVIAAGVDLVTFSGDKLLGGP-QAGIIVGKK 302 (454)
T ss_pred CCCCCC----HHHHHHHHHHcCCeEEEECCCcccccchhccCCCCcccccHhHcCCCEEEecCccccCCC-eEEEEEECH
Confidence 3456 9999999999999999996321111111 111122223458999999 999764 368888999
Q ss_pred HHHhhccC
Q 013008 331 KVASAINY 338 (451)
Q Consensus 331 ~i~~~~~~ 338 (451)
++++.++.
T Consensus 303 ~~i~~l~~ 310 (454)
T TIGR00474 303 ELIERLKK 310 (454)
T ss_pred HHHHhhhh
Confidence 88877653
No 329
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.46 E-value=5.7e-12 Score=125.86 Aligned_cols=291 Identities=13% Similarity=0.022 Sum_probs=171.1
Q ss_pred CCHH-HHHHHHHHHhhcccccCCCCCHHHHHHHHHHhhccCC---CeEEecC-CHHHHHHHHHHHHHHHhhhcCCCCCCC
Q 013008 115 GDAD-WIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFA---DRVFFSN-TGTEANEAAIKFARKFQRHSNPDSKEP 189 (451)
Q Consensus 115 ~~p~-v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~---e~v~~~~-sG~eA~~~al~~a~~~~~~~~~~~~~~ 189 (451)
.+|. |.+|+.+..-...|.+. -......+..+.++++++. ++|+|++ |||++++.++..+. . +
T Consensus 23 ~~~~~v~~a~~~~~~~~~hr~~-~f~~~~~~~r~~l~~l~~~~~~~~v~~~~gs~T~~~~~~~~~l~---~--------~ 90 (378)
T PRK03080 23 KRPGWQLEALADALLGRSHRQK-PVKALLKRVIEGTRELLSLPEGYEVGIVPGSDTGAWEMALWSLL---G--------A 90 (378)
T ss_pred CChHHHHHHHHhhhcccCcCCH-HHHHHHHHHHHHHHHHhCCCCCceEEEECCchHHHHHHHHHhcC---C--------C
Confidence 3577 88888754321112111 1223366777778888872 3688876 89999999998653 1 1
Q ss_pred CceEEEEcCCccCChhhhhh--ccCCCCcCCCCcCCCCCeeEe--eC---CCHHHHHHhcCCCCeEEEEEccccCCCCcc
Q 013008 190 ATEFVSFTNSFHGRTMGALA--LTSKEHYRSPFEPVMPGVNFV--EY---GNIEATRKLIQPGKTAAVFVEPIQGEGGIY 262 (451)
Q Consensus 190 ~~~ii~~~~~yhg~~~~~~~--~~~~~~~~~~~~~~~~~~~~~--~~---~d~~~le~~l~~~~~aavi~ep~~~~~G~~ 262 (451)
++.+++. .+.||....... ..+. ..+..+ ++ .|++++ +. .+.|.+..+...+|.+
T Consensus 91 ~~~~vi~-~g~f~~~~~~~~~~~~g~-----------~~v~~~~~~~g~~~d~~~i----~~--~~~V~~~h~~t~tG~~ 152 (378)
T PRK03080 91 RRVDHLA-WESFGSKWATDVVKQLKL-----------EDPRVLEADYGSLPDLSAV----DF--DRDVVFTWNGTTTGVR 152 (378)
T ss_pred CcceEEE-eCHHHHHHHHHHHhhcCC-----------CCceEeccCCCCCCCHhhc----CC--CCCEEEEecCCcccee
Confidence 2223333 456666433211 0111 011111 11 144443 22 2346666666677888
Q ss_pred ccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccccccCCCcceeeec--ccccCCcccccccccHHHHhhccCCC
Q 013008 263 SATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLA--KPLAGGLPIGAALVTEKVASAINYGD 340 (451)
Q Consensus 263 ~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~t~s--K~lg~G~~iG~v~~~~~i~~~~~~~~ 340 (451)
.| +++|.+ ++||+++|+|-+++ +|.. ....+ + .|++++| |.|++...+|++..+++..+.+.+..
T Consensus 153 ~p----i~~I~~--~~~g~~~vVDa~qs-~G~~--pidv~--~--iD~~~~s~~K~l~~P~G~g~l~v~~~~~~~~~p~~ 219 (378)
T PRK03080 153 VP----VARWIG--ADREGLTICDATSA-AFAL--PLDWS--K--LDVYTFSWQKVLGGEGGHGMAILSPRAVERLESYT 219 (378)
T ss_pred cc----chhhcc--ccCCCeEEEecccc-cccC--CCCHH--H--CcEEEEehhhhCCCCCceEEEEECHHHHHhhhccc
Confidence 87 888888 78999999999986 5322 22222 2 4888766 98876556888999998887665321
Q ss_pred ----------------------ccCCCCC-cHHHHHHHHHHHHHhcCh-HHH---HH----------HHhCCCCccee--
Q 013008 341 ----------------------HGSTFAG-SPLVCNAAIAVLDKISNP-AFL---AS----------KLARNPHVKDV-- 381 (451)
Q Consensus 341 ----------------------~~~t~~~-~~~~~aaa~aal~~~~~~-~~~---~~----------~~~~~~~~~~v-- 381 (451)
..+|.+. +..+..+..++|+.+.+. ++. ++ .++..+.+...
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~ 299 (378)
T PRK03080 220 PARPIPKFFRLTKGGKAIENSFKGQTINTPSMLTVEDYLDQLDWANSIGGLDALIARTAANASVLYDWAEKTPWATPLVA 299 (378)
T ss_pred CCCCCchhheeccchHHhhhhhcCCcccCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCcccccC
Confidence 0122222 333445556778777543 221 22 22334422111
Q ss_pred --cc-cceeEEEEecC----ChHHHHHHHHHCCceeeecCC---CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHhh
Q 013008 382 --RG-LGLIIGIEFDV----SATPVVDACRDSGLLVLTAGK---GNVVRLVPPLIISEQELDQAVEILCKTLPVLDS 448 (451)
Q Consensus 382 --~g-~G~~~~~~~~~----~~~~~~~~l~~~Gv~~~~~~~---~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~~~ 448 (451)
.. .+.+..+.++. ...++...|+++|+.+..++. ++.+|+++....+++|++.+++.|++++++++.
T Consensus 300 ~~~~~s~~i~~~~~~~~~~~~~~~~~~~l~~~~i~v~~g~~~~~~~~vRis~~~~~t~~di~~l~~al~~~~~~~~~ 376 (378)
T PRK03080 300 DPATRSNTSVTLDFVDAQAAVDAAAVAKLLRENGAVDIEPYRDAPNGLRIWCGPTVEPADVEALTPWLDWAFERLKA 376 (378)
T ss_pred CccccCccEEEEEcCCchHHHHHHHHHHHHHcCCeeccccccCCCCcEEEecCCCCCHHHHHHHHHHHHHHHHHHhh
Confidence 11 12455665533 234567778888888765431 367999999999999999999999999988764
No 330
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.46 E-value=8.6e-12 Score=123.93 Aligned_cols=290 Identities=20% Similarity=0.207 Sum_probs=173.5
Q ss_pred HHHHHHHHHHhhcccccCCCCCHHHHHHHHHHhhccCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEc
Q 013008 118 DWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFT 197 (451)
Q Consensus 118 ~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~ 197 (451)
+..+++.+.++.... ........+++++++++++.+.++.++||+.|+..|++++.. .++++||+..
T Consensus 6 e~~~~v~~~l~s~~~---~~~g~~~~~fE~~~a~~~g~~~~~~~~sgt~Al~~al~~l~~----------~~gdeVi~p~ 72 (363)
T PF01041_consen 6 EEIDAVLEVLRSGWL---STYGPYVEEFEKEFAEYFGVKYAVAVSSGTSALHLALRALGL----------GPGDEVIVPA 72 (363)
T ss_dssp HHHHHHHHHHHHTCC---SSSSHHHHHHHHHHHHHHTSSEEEEESSHHHHHHHHHHHTTG----------GTTSEEEEES
T ss_pred HHHHHHHHHHHhCCc---cCCCHHHHHHHHHHHHHhCCCeEEEeCChhHHHHHHHHhcCC----------CcCceEecCC
Confidence 455667776665321 111456889999999999999999999999999999997431 1589999998
Q ss_pred CCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHH
Q 013008 198 NSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACD 277 (451)
Q Consensus 198 ~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~ 277 (451)
-+|+.........+..+.+. ...+.... -|++.+++++.+ ++++|++-..+|.. .. +++|.++|+
T Consensus 73 ~t~~~~~~ai~~~G~~pv~~----Di~~~~~~---id~~~~~~~i~~-~t~ai~~~h~~G~~---~d----~~~i~~~~~ 137 (363)
T PF01041_consen 73 YTFPATASAILWAGAEPVFV----DIDPETLN---IDPEALEKAITP-KTKAILVVHLFGNP---AD----MDAIRAIAR 137 (363)
T ss_dssp SS-THHHHHHHHTT-EEEEE-----BETTTSS---B-HHHHHHHHHT-TEEEEEEE-GGGB----------HHHHHHHHH
T ss_pred CcchHHHHHHHHhccEEEEE----eccCCcCC---cCHHHHHHHhcc-CccEEEEecCCCCc---cc----HHHHHHHHH
Confidence 88876654444443332221 11111100 189999999975 56788877776653 33 999999999
Q ss_pred HhCCEEEEeccccCCCcccccccccccCCCcceeeec----ccccCCccccccccc-HHHHhhccC---CC---------
Q 013008 278 DAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLA----KPLAGGLPIGAALVT-EKVASAINY---GD--------- 340 (451)
Q Consensus 278 ~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~t~s----K~lg~G~~iG~v~~~-~~i~~~~~~---~~--------- 340 (451)
+||++||.|-+|+ +|-. +.-...|-.-|+.+|| |.++.| -.|+|+.+ +++.+.++. ..
T Consensus 138 ~~~i~lIeD~a~a-~g~~---~~g~~~G~~gd~~~fSf~~~K~i~~g-eGG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~ 212 (363)
T PF01041_consen 138 KHGIPLIEDAAQA-FGAR---YKGRPVGSFGDIAIFSFHPTKIITTG-EGGAVVTNDPELAERARALRNHGRSRDAFRRY 212 (363)
T ss_dssp HTT-EEEEE-TTT-TT-E---ETTEETTSSSSEEEEESSTTSSS-SS-S-EEEEESTHHHHHHHHHHTBTTEETSECSTT
T ss_pred HcCCcEEEccccc-cCce---eCCEeccCCCCceEecCCCCCCCcCC-CCeeEEecHHHHHHHhhhhhccCcCccccccc
Confidence 9999999999996 5321 1111223334777776 888643 23787775 566555432 11
Q ss_pred -----ccCCCCCcHHHHHHHHHHHHHhcChHHH--------HHHHhCCCCcceec--c-c--cee--EEEEecC----Ch
Q 013008 341 -----HGSTFAGSPLVCNAAIAVLDKISNPAFL--------ASKLARNPHVKDVR--G-L--GLI--IGIEFDV----SA 396 (451)
Q Consensus 341 -----~~~t~~~~~~~~aaa~aal~~~~~~~~~--------~~~~~~~~~~~~v~--g-~--G~~--~~~~~~~----~~ 396 (451)
.+..+..+.+.++.+++-|+.+....-. .+.++.++.+.... . . ..+ +.+.++. ..
T Consensus 213 ~~~~~~g~n~rm~~~~AAigl~QL~~L~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~r 292 (363)
T PF01041_consen 213 RHELPPGYNFRMSELQAAIGLAQLKRLDEIIARRRENAQRYREALAGIPGIKPPPIPDGAERSSYYRFPIRLPDEALADR 292 (363)
T ss_dssp EESSSS--B-B-BHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTGTTEEEEGCGTTTEEBCESSEEEEETCCGCSTH
T ss_pred cccccCCcccccHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccccccccccchH
Confidence 1234556788888888878765332111 11444555332111 1 1 122 2333332 46
Q ss_pred HHHHHHHHHCCceeeecCC---------------------------CCEEEEeCCCCCCHHHHHHHHHHHH
Q 013008 397 TPVVDACRDSGLLVLTAGK---------------------------GNVVRLVPPLIISEQELDQAVEILC 440 (451)
Q Consensus 397 ~~~~~~l~~~Gv~~~~~~~---------------------------~~~iri~~~~~~t~e~i~~~l~~l~ 440 (451)
.++.+.|.++||-+.+... ...+.+-.....++++++++++.|+
T Consensus 293 d~l~~~L~~~GI~~~~~~~~pl~~~~~~~~~~~~~~~~~P~ae~l~~r~l~LP~~~~lt~edv~~I~~~ir 363 (363)
T PF01041_consen 293 DELVEALRARGIETRPHYPKPLHRQPVYRSYPYYAPGDLPNAERLSQRLLSLPIHPRLTEEDVDYIAEAIR 363 (363)
T ss_dssp HHHHHHHHHTTBEEBCSTSSCGGGSGGGTTGEEEETSSSHHHHHHHHHEEEEEHSTTSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCcccccccCchhhhHHHHhcCccccCCCHHHHHHHhCeEECcCCCCCCHHHHHHHhhccC
Confidence 7899999999998764320 0135555566789999999998874
No 331
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.46 E-value=2.7e-11 Score=132.04 Aligned_cols=286 Identities=14% Similarity=0.158 Sum_probs=167.2
Q ss_pred HHHHHHHHhhccCCCeEEecC-CHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCC
Q 013008 142 QIELAKRLVACSFADRVFFSN-TGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPF 220 (451)
Q Consensus 142 ~~~l~~~l~~~~~~e~v~~~~-sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~ 220 (451)
..++.++|++++|.+.+.+.+ +|++|+..++.+++.|...++.. .+++|++. .+-|++...+....|.....
T Consensus 544 i~e~q~~l~eltG~d~~sl~~~~ga~ge~agL~a~r~~~~~~G~~---~r~~vlis-~~aH~snp~sa~~~G~~vv~--- 616 (954)
T PRK05367 544 IDQLEAWLAEITGYDAVSLQPNAGAQGEYAGLLAIRAYHESRGEG---HRDVCLIP-SSAHGTNPASAVMAGMKVVV--- 616 (954)
T ss_pred HHHHHHHHHHHHCCCCEEECccHHHHHHHHHHHHHHHHhhccCCC---CCCEEEEE-chhhhhhHHHHHHCCCEEEE---
Confidence 567888999999977666655 67888878887788775433221 24445555 55677665554443322111
Q ss_pred cCCCCCeeEeeCCCHHHHHHhcCC--CCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCccccc
Q 013008 221 EPVMPGVNFVEYGNIEATRKLIQP--GKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYL 298 (451)
Q Consensus 221 ~~~~~~~~~~~~~d~~~le~~l~~--~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~ 298 (451)
.+...... -|+++|++.+++ .++++|++.-....++...+ +++|.++|+++|+++++|.++.+ +-.+..
T Consensus 617 v~~d~~G~----iD~~~L~~~i~~~~~~la~V~it~pst~G~~e~~----I~eI~~i~h~~G~~v~VDgA~~~-al~~l~ 687 (954)
T PRK05367 617 VACDENGN----IDLDDLRAKAEEHADNLAAIMITYPSTHGVFEET----IREICEIVHEHGGQVYLDGANMN-AQVGLA 687 (954)
T ss_pred ECCCCCCC----cCHHHHHHHHhccCCCeEEEEEEcCCCCeeecCC----HHHHHHHHHHcCCEEEEECcChh-hccCCC
Confidence 11111101 178999999974 25666655443333332245 99999999999999999999852 111110
Q ss_pred ccccccCCCcceeeec--cccc-----CCcccccccccHHHHhhccCCCc--------cCCCCCcHHH----HHHHHHHH
Q 013008 299 WAHEHYGIFPDIMTLA--KPLA-----GGLPIGAALVTEKVASAINYGDH--------GSTFAGSPLV----CNAAIAVL 359 (451)
Q Consensus 299 ~~~~~~~~~pdi~t~s--K~lg-----~G~~iG~v~~~~~i~~~~~~~~~--------~~t~~~~~~~----~aaa~aal 359 (451)
... ....|+++++ |.|+ ||-.+|++.+++.+...+..... .++....+.+ ...+...+
T Consensus 688 -~pg--~~GADi~~~s~HK~f~~P~G~GGPg~G~l~vr~~l~p~lpg~~v~~~~~~~~~g~v~ta~~g~al~~~~a~~yi 764 (954)
T PRK05367 688 -RPG--DIGADVSHLNLHKTFCIPHGGGGPGVGPIGVKAHLAPFLPGHPVQIAGGETGIGAVSAAPFGSASILPISWMYI 764 (954)
T ss_pred -Chh--hcCCCEEEecCcccCCCCcCCCCCceEEEeecccccccCCCCccCcCCCCCCcCcchhHHHHHHHHHHHHHHHH
Confidence 111 2347888776 9875 23557788887776655432110 1222223332 22233334
Q ss_pred HHhcChHHHHH--------------HHhCCCCcceecc------cceeEEE-Eec----CChHHHHHHHHHCCceeeecC
Q 013008 360 DKISNPAFLAS--------------KLARNPHVKDVRG------LGLIIGI-EFD----VSATPVVDACRDSGLLVLTAG 414 (451)
Q Consensus 360 ~~~~~~~~~~~--------------~~~~~~~~~~v~g------~G~~~~~-~~~----~~~~~~~~~l~~~Gv~~~~~~ 414 (451)
..+-.+++.+. +.+.++.. ..+ ...++.+ .++ ....++.++|.+.|+......
T Consensus 765 ~~~G~~Glr~~a~~~~~~A~Yl~~~L~~~~~~~--~~~~~~~~~~e~i~~~~~~~~~~g~~~~di~krL~d~G~~~~t~~ 842 (954)
T PRK05367 765 RMMGAEGLRQATEVAILNANYIAKRLKDHYPVL--YTGANGRVAHECILDLRPLKESTGITVDDIAKRLIDYGFHAPTMS 842 (954)
T ss_pred HHHCHHHHHHHHHHHHHHHHHHHHHHHhhcCcc--ccCCCCCcccceEEEeecccccCCCCHHHHHHHHHHCCCeEeecC
Confidence 43333433332 22222211 111 1122222 121 346789999999999875422
Q ss_pred C--CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHhh
Q 013008 415 K--GNVVRLVPPLIISEQELDQAVEILCKTLPVLDS 448 (451)
Q Consensus 415 ~--~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~~~ 448 (451)
. .+.++++|.-..+++|||+++++|.+..+++++
T Consensus 843 ~pv~~~l~i~ptE~~s~~elDr~~~al~~i~~e~~~ 878 (954)
T PRK05367 843 FPVAGTLMVEPTESESKAELDRFCDAMIAIRAEIDE 878 (954)
T ss_pred CccCCEEEEEeeecCCHHHHHHHHHHHHHHHHHHHH
Confidence 1 367999999999999999999999999888776
No 332
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.43 E-value=3.5e-11 Score=117.27 Aligned_cols=294 Identities=17% Similarity=0.169 Sum_probs=179.6
Q ss_pred HHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHhhccCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEE
Q 013008 117 ADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSF 196 (451)
Q Consensus 117 p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~ 196 (451)
.+..+++.+.++..... .-+.-.++++++++++|...++.++|||.|++.|++++- . .++|.||+.
T Consensus 15 ~~e~~~v~~vl~sg~i~----~G~~v~~FE~~~ae~~G~k~ava~~sgT~AL~laL~al~-i---------g~GDeVI~p 80 (374)
T COG0399 15 EEELAAVQEVLKSGWLT----GGPFVRRFEQAFAEYLGVKYAVAVSSGTAALHLALLALA-I---------GPGDEVIVP 80 (374)
T ss_pred hHHHHHHHHHHHcCCee----cChHHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHhcC-C---------CCCCEEEec
Confidence 44566777777653321 133467899999999999999999999999999999544 1 168999999
Q ss_pred cCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCC-CHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHH
Q 013008 197 TNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYG-NIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDA 275 (451)
Q Consensus 197 ~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l 275 (451)
.-+|-......+..+..+.+. ++..-.+| |++.+|++|.+. ++|||.--..|.. +. +++|.+|
T Consensus 81 s~TfvATan~i~~~Ga~PVFv--------Did~~T~nid~~~ie~aIt~~-tKAIipVhl~G~~---~d----m~~i~~l 144 (374)
T COG0399 81 SFTFVATANAVLLVGAKPVFV--------DIDPDTLNIDPDLIEAAITPR-TKAIIPVHLAGQP---CD----MDAIMAL 144 (374)
T ss_pred CCchHHHHHHHHHcCCeEEEE--------ecCCcccCCCHHHHHHHcccC-CeEEEEehhccCC---CC----HHHHHHH
Confidence 888855443333333332221 11111122 899999999864 7777776666653 34 9999999
Q ss_pred HHHhCCEEEEeccccCCCcccccccccccCCCcceeeec----ccccCCccccccccc-HHHHhhccCC----C------
Q 013008 276 CDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLA----KPLAGGLPIGAALVT-EKVASAINYG----D------ 340 (451)
Q Consensus 276 ~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~t~s----K~lg~G~~iG~v~~~-~~i~~~~~~~----~------ 340 (451)
|++||++||.|-+|+ +|-.=+ -...|---|+.+|| |.++.| -.|+++.+ +++.+.++.. .
T Consensus 145 a~~~~l~vIEDaAqa-~Ga~y~---gk~vGt~Gd~~~fSF~~~K~ittg-EGGav~tnd~ela~k~~~lr~hG~~~~~~~ 219 (374)
T COG0399 145 AKRHGLPVIEDAAQA-HGATYK---GKKVGSFGDIGAFSFHATKNLTTG-EGGAVVTNDEELAEKARSLRNHGLSRDAVF 219 (374)
T ss_pred HHHcCCeEEEEcchh-ccCeec---CcccccccceEEEEecCCCCcccc-CceEEEeCCHHHHHHHHHHHHhCcCCCccc
Confidence 999999999999985 542211 11223334566665 888865 55888875 5677665321 1
Q ss_pred ------ccCCCCCcHHHHHHHHHHHHHhcChHHHHH--------HHhCCCCc-ceecccce-----eEEEEec---CChH
Q 013008 341 ------HGSTFAGSPLVCNAAIAVLDKISNPAFLAS--------KLARNPHV-KDVRGLGL-----IIGIEFD---VSAT 397 (451)
Q Consensus 341 ------~~~t~~~~~~~~aaa~aal~~~~~~~~~~~--------~~~~~~~~-~~v~g~G~-----~~~~~~~---~~~~ 397 (451)
.++.+..+-+.+|.+++-|+.+++....++ .++.++.+ ......+. ++.+.++ ....
T Consensus 220 ~y~~~~~G~N~rm~~iqAAigl~QL~~l~~~~~~R~~~a~~Y~~~l~~~~~~~~p~~~~~~~~~~~~~~i~~~~~~~~R~ 299 (374)
T COG0399 220 KYLHEELGYNYRLTEIQAAIGLAQLERLDEINERRREIAQIYAEALKGLPGITLPPEPDGAVHAWHLYTILVDEEGISRD 299 (374)
T ss_pred cceeeecccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCceeeeeeeEEEecCCCCCHH
Confidence 122233345566666666665533211111 23433311 11122221 1112222 2346
Q ss_pred HHHHHHHHCCce----eeecC--------------C--------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 013008 398 PVVDACRDSGLL----VLTAG--------------K--------GNVVRLVPPLIISEQELDQAVEILCKTLPV 445 (451)
Q Consensus 398 ~~~~~l~~~Gv~----~~~~~--------------~--------~~~iri~~~~~~t~e~i~~~l~~l~~~l~~ 445 (451)
.+.+.|.++||. ..|.. . ...+.+-....++++++++.++.|.+++..
T Consensus 300 ~l~~~L~~~gi~~~~~~~P~~~~~~~~~~~~~~~~~lp~ae~~~~r~l~LP~~p~l~~~~~~~V~~~l~~~~~~ 373 (374)
T COG0399 300 ALMESLKEAGVGAVVYFRPLHLQPAYRQLGYFPEGDLPNAEDLSERILSLPLHPNLSEEDVDRVIEALKEVLGS 373 (374)
T ss_pred HHHHHHHhCCCCceEEeeccccchhhhcccccccCCCchHHHHhhCeEEccCCCCCCHHHHHHHHHHHHHHhcc
Confidence 788889888654 33311 0 124566555678999999999999998753
No 333
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.40 E-value=1.8e-11 Score=122.87 Aligned_cols=280 Identities=11% Similarity=0.070 Sum_probs=152.8
Q ss_pred HHHHHHHHhhccCCC---eEEecCCHH-HHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCC-Cc
Q 013008 142 QIELAKRLVACSFAD---RVFFSNTGT-EANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKE-HY 216 (451)
Q Consensus 142 ~~~l~~~l~~~~~~e---~v~~~~sG~-eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~-~~ 216 (451)
..++++.+++.+|.. .++++++|+ .++.+++.+++... .+++.||+..-+ |-++..++...|.. .+
T Consensus 107 ~~~~e~~~~~~~G~~~~~~a~~v~~~Tg~al~laL~alr~~~--------~~gd~VI~p~~t-h~S~~kAi~~~G~~pv~ 177 (444)
T TIGR03531 107 TNKLVKDFLKLLGLRSIKSAFVVPLATGMSLSLCLSALRHKR--------PKAKYVIWPRID-QKSCIKAISTAGFEPRV 177 (444)
T ss_pred HHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHHcCCcC--------CCCCEEEEECcC-hHHHHHHHHHcCCeEEE
Confidence 567788888888854 799999999 68888887665211 136778887766 66665655554432 11
Q ss_pred CCCCcCCCCCeeEeeCCCHHHHHHhcCC---CCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCC
Q 013008 217 RSPFEPVMPGVNFVEYGNIEATRKLIQP---GKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLG 293 (451)
Q Consensus 217 ~~~~~~~~~~~~~~~~~d~~~le~~l~~---~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~g 293 (451)
... . ..++. +. -|+++|+++|.+ +.+.+|+..|..+..|...+ +++|.++|++||+++|+|++|...
T Consensus 178 Vd~-~-~d~~~-~~--iD~e~Le~aIt~~~~kai~~Vv~Tp~t~~~g~~dd----L~eIa~la~k~gI~lIvDaAyg~~- 247 (444)
T TIGR03531 178 IET-V-LDGDE-LT--TDVEDIERAIEEIGPDNILCVLSTTSCFAPRSPDD----IEEIAKICANYDIPHIVNNAYGLQ- 247 (444)
T ss_pred eee-e-ecCcC-CC--cCHHHHHHHHHhccCCCEEEEEEcCCcCCCcchhC----HHHHHHHHHHcCCEEEEECcCcCc-
Confidence 100 0 00110 00 189999999974 45666666665443333333 999999999999999999999631
Q ss_pred ccccc-ccccccCC-Ccceeee--cccccCCcccccccc-cHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcChHHH
Q 013008 294 RTGYL-WAHEHYGI-FPDIMTL--AKPLAGGLPIGAALV-TEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFL 368 (451)
Q Consensus 294 r~G~~-~~~~~~~~-~pdi~t~--sK~lg~G~~iG~v~~-~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~ 368 (451)
..-.. ........ ..|++++ .|.+......|.++. ++++++.+...... ... +..++.+..+++.. ..+.+.
T Consensus 248 ~~~~~~~~~~g~~~Grad~vv~s~hK~l~~pg~Gg~I~~~d~el~~~i~~~y~g-~~~-~s~~~~~~~~ll~~-G~~g~~ 324 (444)
T TIGR03531 248 SNKYMELINKAIKVGRVDAVVSSTDKNFMVPVGGAIIYSFDENFIQEISKSYPG-RAS-ASPSLDVLITLLSL-GSKGYL 324 (444)
T ss_pred ChhhhhhhhccccccCCCeEEEeCccCCCCCCCEEEEEECCHHHHHHHHHhccC-CCC-ChHHHHHHHHHHHh-CHHHHH
Confidence 11000 00011112 2466655 588864212455556 67888777643222 222 23344444444432 122221
Q ss_pred HH-----------------HHhCCC-CcceecccceeEEEEec----CChHHHHHHHHHCCce----eeecC--------
Q 013008 369 AS-----------------KLARNP-HVKDVRGLGLIIGIEFD----VSATPVVDACRDSGLL----VLTAG-------- 414 (451)
Q Consensus 369 ~~-----------------~~~~~~-~~~~v~g~G~~~~~~~~----~~~~~~~~~l~~~Gv~----~~~~~-------- 414 (451)
+. +.+++. .+-..+.--.-+++.++ .+...+-..|..++|- +.++.
T Consensus 325 ~li~~~~~~a~~l~~~L~~l~~~~~~~~~~~~~n~is~~~~~~~~~~~~~~~~g~~l~~~~v~g~r~v~~~~~~~~~~~~ 404 (444)
T TIGR03531 325 ELLKERKEMYKYLKELLQKLAERHGERLLDTPENPISSAMTLSTLKGKDPTMLGSMLYSRRVTGPRVVTNGDSKTVGGCE 404 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCcEeecCCCCceeEEEecccccccCHHHHHHHHHhCCCCCceeecCCCceEECCEE
Confidence 11 112222 11111111112233332 3456677778777652 22221
Q ss_pred ---CC--------CEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 013008 415 ---KG--------NVVRLVPPLIISEQELDQAVEILCKTL 443 (451)
Q Consensus 415 ---~~--------~~iri~~~~~~t~e~i~~~l~~l~~~l 443 (451)
.+ .++-+.....++++|||.++++|++++
T Consensus 405 ~~~~~~~~~~~~~~y~~~~~~~g~~~~~~~~~~~~l~~~~ 444 (444)
T TIGR03531 405 FKGYGSHTSNYPCPYITAAAAIGMTKEDVDTFVSRLEKSL 444 (444)
T ss_pred eecccccccCCCchhHHHHHHhCCcHHHHHHHHHHHhhcC
Confidence 00 123344456789999999999999863
No 334
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.38 E-value=2.6e-10 Score=113.24 Aligned_cols=322 Identities=13% Similarity=0.099 Sum_probs=176.7
Q ss_pred CCEEEeeccCcccccCCCCCHHHHHH-HHHHHhhcccccCCCCCHHHHHHHHHHhhccCCCeEEecCCHHHHHHHHHHHH
Q 013008 97 GREYLDLSSGIAVNALGHGDADWIKA-VVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFA 175 (451)
Q Consensus 97 G~~~iD~~~~~~~~~lG~~~p~v~~a-~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~e~v~~~~sG~eA~~~al~~a 175 (451)
..-|||+.+-.++ +.+.++ +.. +..+.- .+..++...+|++.+++.++.+.+++++||+.|...+..+.
T Consensus 37 ~~v~iDLltDsgT-------~aMs~~q~a~-~~~GDe--~yag~~s~~~lE~~va~~~G~~~av~v~sGT~Al~ll~~l~ 106 (450)
T TIGR02618 37 EDVYIDLLTDSGT-------NAMSDKQWAG-LMMGDE--AYAGSRNFYHLERTVRELYGFKYVVPTHQGRGAENLLSQIA 106 (450)
T ss_pred CceEEEcccCCCc-------HHHHHHHHHH-hhhcch--hhcCCCcHHHHHHHHHHHHCCCeEEEcCCHHHHHHHHHHhC
Confidence 4579999987663 444444 222 211111 12234457899999999999999999999999987653322
Q ss_pred HHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCc-CCCCCeeEeeC--C-CHHHHHHhcCCC---CeE
Q 013008 176 RKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFE-PVMPGVNFVEY--G-NIEATRKLIQPG---KTA 248 (451)
Q Consensus 176 ~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~-d~~~le~~l~~~---~~a 248 (451)
. +++|.| ..+.|...+...+...|......... ...+. ...|+ + |++.|+++|.+. .++
T Consensus 107 ---l--------~pGDeV--psn~~f~Tt~ahIe~~Gav~vDi~~dea~~~~-~~~p~~GniD~~~Le~aI~~~~~~~~~ 172 (450)
T TIGR02618 107 ---I--------KPGDYV--PGNMYFTTTRYHQEKNGATFVDIIIDEAHDAQ-LNIPFKGNVDLKKLQKLIDEVGADKIP 172 (450)
T ss_pred ---C--------CCcCEE--CCceeHHHHHHHHHhCCeEEEeeecccccccc-cCCCCCCCcCHHHHHHHhccccCcccC
Confidence 1 156755 44444333333233333211000000 00000 00011 1 899999999742 345
Q ss_pred EEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCc-----------cccccc--ccccCCCcceeeecc
Q 013008 249 AVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGR-----------TGYLWA--HEHYGIFPDIMTLAK 315 (451)
Q Consensus 249 avi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr-----------~G~~~~--~~~~~~~pdi~t~sK 315 (451)
.|.++-..+..|+.+.+.+.+++++++|++||+.||.|-++. +|. .+.... .....-..|.+ ++|
T Consensus 173 lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~Gl~vi~DaAR~-~gNA~~I~~re~g~~~~~i~ei~~e~~~~aD~~-~~S 250 (450)
T TIGR02618 173 YICLAVTVNLAGGQPVSMANMREVRELCEAHGIKVFYDATRC-VENAYFIKEREQGYEDKSIAEILKEMMSYADGC-TMS 250 (450)
T ss_pred ceEEEEecccCCCeeCCHHHHHHHHHHHHHcCCEEEEEccch-hhChhhhhcccccccCCCHHHHHHHHhccCcEE-EEe
Confidence 566665555554467888999999999999999999999874 311 111000 00000134554 444
Q ss_pred cc-cCCcccccccc--cHHHHhhccCC--C--ccCCCCC-cHHHHHHHHHHHHHhcChHHHHH-----------HHh-CC
Q 013008 316 PL-AGGLPIGAALV--TEKVASAINYG--D--HGSTFAG-SPLVCNAAIAVLDKISNPAFLAS-----------KLA-RN 375 (451)
Q Consensus 316 ~l-g~G~~iG~v~~--~~~i~~~~~~~--~--~~~t~~~-~~~~~aaa~aal~~~~~~~~~~~-----------~~~-~~ 375 (451)
+. .++.|+|.+++ ++++++..+.. . -..|+++ ..-.+.|...+|+...+..+.++ |.+ .+
T Consensus 251 ~~Kd~~~~~GG~l~~~d~~l~~k~r~~~~~~eG~~tyGgla~r~~~ala~gL~e~~~~~y~~~r~~~a~~La~~L~~~Gv 330 (450)
T TIGR02618 251 GKKDCLVNIGGFLCMNDDEMFQSAKELVVVFEGMPSYGGLAGRDMEAMAIGIREAVDYEYIEHRVKQVRYLGDKLKAAGV 330 (450)
T ss_pred eccCCCCCCceEEEeCCHHHHHHHHHHhhhcCCccccCchhhhhHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHCCC
Confidence 44 23457666554 67888876543 1 1124443 22233343444554333333333 212 23
Q ss_pred CCcceecccceeEEEEec----------CChHHHHHHHH-HCCceeee-------c----CC-----CCEEEEeCCC-CC
Q 013008 376 PHVKDVRGLGLIIGIEFD----------VSATPVVDACR-DSGLLVLT-------A----GK-----GNVVRLVPPL-II 427 (451)
Q Consensus 376 ~~~~~v~g~G~~~~~~~~----------~~~~~~~~~l~-~~Gv~~~~-------~----~~-----~~~iri~~~~-~~ 427 (451)
|.+ .+..|..+.++.. -++..++.+|. +.||--.- . +. -..+|+.+|- +-
T Consensus 331 pv~--~p~ggh~V~vda~~~lph~~~~~~p~~al~~~ly~~~gir~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~y 408 (450)
T TIGR02618 331 PIV--EPVGGHAVFLDARRFLPHIPQDQFPAQSLAASIYVETGVRSMERGIVSAGRNNVTGEHHRPKLELVRLTIPRRVY 408 (450)
T ss_pred ccc--CCCCcceEEEEhHHhCCCCChhhChHHHHHHHHHHHhCccEEeecceecccCCCCCcccCCccceeeeccccccc
Confidence 332 2345666666652 24567777776 34543221 0 11 1457887664 56
Q ss_pred CHHHHHHHHHHHHHHHHHH
Q 013008 428 SEQELDQAVEILCKTLPVL 446 (451)
Q Consensus 428 t~e~i~~~l~~l~~~l~~~ 446 (451)
|.+++|...++|..+.++-
T Consensus 409 t~~h~~~v~~~~~~~~~~~ 427 (450)
T TIGR02618 409 TYAHMDVVADGIIKLYKHR 427 (450)
T ss_pred cHhHHHHHHHHHHHHHhhH
Confidence 9999999999999887653
No 335
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=99.38 E-value=3.8e-10 Score=108.52 Aligned_cols=283 Identities=19% Similarity=0.197 Sum_probs=183.4
Q ss_pred HHHHHHHHhhccCCCeEEec-CCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCC
Q 013008 142 QIELAKRLVACSFADRVFFS-NTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPF 220 (451)
Q Consensus 142 ~~~l~~~l~~~~~~e~v~~~-~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~ 220 (451)
..+|.++|++..|.|.|.+. ++|+++=.+.+.++|+|+..++.. .|+.+|+.+ +-||....+..+.|-.
T Consensus 111 i~~Lq~~L~~ITG~DavsLQP~AGAqGE~aGll~Ir~YHe~rG~~---~R~~~LIP~-SAHGTNPASAam~G~~------ 180 (496)
T COG1003 111 IYELQEWLKEITGMDAVSLQPNAGAQGEYAGLLAIRAYHESRGEG---HRNICLIPD-SAHGTNPASAAMAGFK------ 180 (496)
T ss_pred HHHHHHHHHHhcCCceeeccCCCCcchhhHHHHHHHHHHHHcCCC---cCcEEEeec-cccCCChhhHhhcCce------
Confidence 56888999999998877765 679999999999999999877764 366666665 6799887776665432
Q ss_pred cCCCCCeeEeeCC-----CHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEecc----ccC
Q 013008 221 EPVMPGVNFVEYG-----NIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEV----QCG 291 (451)
Q Consensus 221 ~~~~~~~~~~~~~-----d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv----~tg 291 (451)
++.++.+ |+++|++++. ++++++++...+ +-|. =++-+++|+++.+++|..|+.|-+ +-|
T Consensus 181 ------VV~V~~~~~G~VDlddLk~k~~-~~~AalMiTnPs-T~Gv---FE~~I~ei~~ivH~~Gg~vY~DGANlNA~vG 249 (496)
T COG1003 181 ------VVVVKCDENGNVDLDDLRAKAE-DNLAALMITNPS-TLGV---FEEDIREICEIVHEAGGQVYYDGANLNAIVG 249 (496)
T ss_pred ------EEEEecCCCCCccHHHHHHHhc-cceeEEEeccCc-cccc---chhhHHHHHHHHHHcCCEEEecCcchhhhhc
Confidence 2233332 8999999997 467777765433 2243 234588999999999999999987 445
Q ss_pred CCccccc-ccccccCCCcceeeecccccC-CcccccccccHHHHhhccC----C---------------CccCCCCCcHH
Q 013008 292 LGRTGYL-WAHEHYGIFPDIMTLAKPLAG-GLPIGAALVTEKVASAINY----G---------------DHGSTFAGSPL 350 (451)
Q Consensus 292 ~gr~G~~-~~~~~~~~~pdi~t~sK~lg~-G~~iG~v~~~~~i~~~~~~----~---------------~~~~t~~~~~~ 350 (451)
..|.|.+ +-..|+++.- ||+-.-|| |-..|-|.+++++...+.. . .....+-||..
T Consensus 250 ~~rPGd~G~DV~HlNLHK---TF~iPHGGGGPG~GPvgVk~~L~pfLP~p~~~~~~~~y~~~~~~~~s~g~~~a~~Gs~~ 326 (496)
T COG1003 250 LARPGDMGFDVVHLNLHK---TFCIPHGGGGPGAGPVGVKAHLAPFLPGPVVYHDVGEYRLDYDGKKSIGVSAAPYGSAS 326 (496)
T ss_pred cccccccccceEEeeccc---ccccCCCCCCCCCCceehHhhccccCCCCcccCCCccccccCCCCccceeeccccCcch
Confidence 5566653 2233333321 55555565 4667778888887776532 0 01223344544
Q ss_pred HHHHHHHHHHHhcChHHHHH----------HHh----CCCCcceecccc---eeEEEEec-------CChHHHHHHHHHC
Q 013008 351 VCNAAIAVLDKISNPAFLAS----------KLA----RNPHVKDVRGLG---LIIGIEFD-------VSATPVVDACRDS 406 (451)
Q Consensus 351 ~~aaa~aal~~~~~~~~~~~----------~~~----~~~~~~~v~g~G---~~~~~~~~-------~~~~~~~~~l~~~ 406 (451)
....+.+-+..+-.+++.+. +++ .++.. ..+.. .-+.++.. ....+++++|++.
T Consensus 327 il~~a~~YI~~mG~~GL~~ase~AvLNANYia~rL~~~y~~~--y~~~~~~~HE~ild~r~l~~~~Gv~~~DvAKrLlD~ 404 (496)
T COG1003 327 ILPIAWAYIRMMGADGLKQASEVAVLNANYIARRLKGYYPVP--YTGENRVAHECILDARPLKKETGVRALDVAKRLLDY 404 (496)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHhhhcCccc--cCCCCcceeEEEeechHhHhhcCCcHHHHHHHHHhc
Confidence 44444554554444433322 222 23322 12222 11122221 4578899999999
Q ss_pred CceeeecCC----CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHhhcC
Q 013008 407 GLLVLTAGK----GNVVRLVPPLIISEQELDQAVEILCKTLPVLDSNS 450 (451)
Q Consensus 407 Gv~~~~~~~----~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~~~~~ 450 (451)
|+....-.. .+.+.|-|.-.-+++++|+++++|.++.++.+++|
T Consensus 405 GfHaPT~~FPliV~~tLMIEPTEsEsk~eLDrf~dami~I~~Ea~~~~ 452 (496)
T COG1003 405 GFHAPTMYFPLIVAGTLMIEPTESESKEELDRFIDAMIAIREEADAVP 452 (496)
T ss_pred CCCCCcccCccccccceeecCCCCCCHHHHHHHHHHHHHHHHHHHhcc
Confidence 987654322 25688999999999999999999999998887664
No 336
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.37 E-value=4.6e-10 Score=111.74 Aligned_cols=320 Identities=14% Similarity=0.113 Sum_probs=174.8
Q ss_pred CCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHhhccCCCeEEecCCHHHHHHHHHHHHH
Q 013008 97 GREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFAR 176 (451)
Q Consensus 97 G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~e~v~~~~sG~eA~~~al~~a~ 176 (451)
..-|||+.+-.++ +.+.+++..++..+.-. +..++...+|++.+++++|.+.+++++||+.|+..++.+..
T Consensus 44 ~~v~IDLlSDS~T-------~aMs~~q~a~~~vGDd~--Yagd~s~~~LE~~vAe~lG~e~aV~v~sGTaAl~ll~~l~v 114 (460)
T PRK13237 44 EDVYIDLLTDSGT-------NAMSDRQWAGMMIGDEA--YAGSRNFYHLEETVQEYYGFKHVVPTHQGRGAENLLSRIAI 114 (460)
T ss_pred CcEEEECcccCCc-------hhccHHHHHHHhhcchh--hcCCCcHHHHHHHHHHHHCCCeEEEeCCHHHHHHHHHHhCC
Confidence 4579999987764 23333333333221111 12344478899999999999999999999999998644222
Q ss_pred HHhhhcCCCCCCCCceEEEEcCCccCChhhh-hhccCCCCcC----CCCcCCCCCeeEeeCC-CHHHHHHhcCCC---Ce
Q 013008 177 KFQRHSNPDSKEPATEFVSFTNSFHGRTMGA-LALTSKEHYR----SPFEPVMPGVNFVEYG-NIEATRKLIQPG---KT 247 (451)
Q Consensus 177 ~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~-~~~~~~~~~~----~~~~~~~~~~~~~~~~-d~~~le~~l~~~---~~ 247 (451)
+ +++.| .+.+|-.+..+ +...|....- ..+.+... .....+ |++.|+++|.+. ++
T Consensus 115 ---~--------pGd~V---p~n~~f~Tt~ahI~~~Ga~fvDi~~d~a~~~~~~--~p~tgnlD~d~Le~~I~~~~~~~~ 178 (460)
T PRK13237 115 ---K--------PGQYV---PGNMYFTTTRYHQELNGGIFVDIIIDEAHDAQSD--HPFKGNVDLDKLQALIDEVGAENI 178 (460)
T ss_pred ---C--------CcCEE---CCccchHhhHHHHHhCCcEEEeeecccccccccC--CCCCCCcCHHHHHHHhccccCCcc
Confidence 1 46643 33334333222 3222221100 00000000 001112 899999999732 34
Q ss_pred EEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCC-----------ccccccc--ccccCCCcceeeec
Q 013008 248 AAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLG-----------RTGYLWA--HEHYGIFPDIMTLA 314 (451)
Q Consensus 248 aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~g-----------r~G~~~~--~~~~~~~pdi~t~s 314 (451)
+.+.++-..+..|+.+.+.+.+++|.++|++||+.||.|-++. +| +.|.... .....-.-|+++||
T Consensus 179 ~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~DaAra-~gna~fI~~re~~y~~~~i~ei~~e~~s~aD~~t~S 257 (460)
T PRK13237 179 AYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFDATRC-VENAYFIKEREEGYQDKSIKEIVHEMFSYADGCTMS 257 (460)
T ss_pred CceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEECcch-hcChhhhcccccccCCCcHhHHhhhccCcCcEEEEe
Confidence 4445444444444467788899999999999999999999985 33 1111100 00011235777776
Q ss_pred --ccccCCccc-ccccc-cHHHHhhccCC----CccCCCCCcHH-HHHHHHHHHHHhcChHHHHH-----------HH-h
Q 013008 315 --KPLAGGLPI-GAALV-TEKVASAINYG----DHGSTFAGSPL-VCNAAIAVLDKISNPAFLAS-----------KL-A 373 (451)
Q Consensus 315 --K~lg~G~~i-G~v~~-~~~i~~~~~~~----~~~~t~~~~~~-~~aaa~aal~~~~~~~~~~~-----------~~-~ 373 (451)
|.++. ++ |+++. ++++.+.++.. .-..||++-.- -++|....|+...++++++. |. .
T Consensus 258 ~~K~~~~--~~GG~i~t~D~eL~~~~r~~~~~~eG~~tygg~~grd~~alAvgl~E~~~~~y~~~ri~~~~~l~~~L~~~ 335 (460)
T PRK13237 258 GKKDCLV--NIGGFLAMNDEELFDEAKELVVVYEGMPSYGGMAGRDMEAMAIGIEESVQYEYIEHRVGQVRYLGEKLLAA 335 (460)
T ss_pred CCCCCCC--CCceEEEECCHHHHHHHHHhccccCCCcCCCChhhhHHHHHHhHHHhhchHHHHHHHHHHHHHHHHHHHHC
Confidence 55543 33 66665 47788877543 12235554211 22222223443334455544 22 3
Q ss_pred CCCCcceecccceeEEEEec----------CChHHHHHHHHH-CCceee-------ec----CC-----CCEEEEeCCC-
Q 013008 374 RNPHVKDVRGLGLIIGIEFD----------VSATPVVDACRD-SGLLVL-------TA----GK-----GNVVRLVPPL- 425 (451)
Q Consensus 374 ~~~~~~~v~g~G~~~~~~~~----------~~~~~~~~~l~~-~Gv~~~-------~~----~~-----~~~iri~~~~- 425 (451)
.+|.+. +..|.-+.++.. -.+..++.+|.. .||-.. .. +. -..+|+.+|-
T Consensus 336 Gvpv~~--p~ggH~v~vda~~~lph~~~~~~p~~al~~~ly~~~GiR~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr 413 (460)
T PRK13237 336 GVPIVE--PVGGHAVFLDARRFLPHLPQDQFPAQALAAELYIESGVRSMERGIVSAGRDPKTGENHYPKLELVRLTIPRR 413 (460)
T ss_pred CCceec--CCCceEEEEEhHHhCCCCCcccChHHHHHHHHHHHhCcCeEeecceecccCCCCCccCCCccceeeeccccc
Confidence 355442 233444444431 246677777763 354322 11 11 1457887664
Q ss_pred CCCHHHHHHHHHHHHHHHHHH
Q 013008 426 IISEQELDQAVEILCKTLPVL 446 (451)
Q Consensus 426 ~~t~e~i~~~l~~l~~~l~~~ 446 (451)
+-|.+++|..+++|..+.++-
T Consensus 414 ~yt~~h~~~v~~~~~~~~~~~ 434 (460)
T PRK13237 414 VYTYAHMDVVADSVIKLYKHR 434 (460)
T ss_pred cccHHHHHHHHHHHHHHHHhH
Confidence 569999999999999887653
No 337
>PLN02880 tyrosine decarboxylase
Probab=99.35 E-value=1.5e-10 Score=118.66 Aligned_cols=302 Identities=13% Similarity=0.056 Sum_probs=166.2
Q ss_pred CHHHHHHHHHHhhccCC-C--------eEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhh
Q 013008 139 SIPQIELAKRLVACSFA-D--------RVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALA 209 (451)
Q Consensus 139 ~~~~~~l~~~l~~~~~~-e--------~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~ 209 (451)
+..+.++.+++++.++. + .-++++||++||..|+.+||.......+... .+.-++..+..-|-+..-+..
T Consensus 121 ~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~-~~~~vv~~S~~aH~Sv~Kaa~ 199 (490)
T PLN02880 121 TELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNA-LEKLVVYASDQTHSALQKACQ 199 (490)
T ss_pred HHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccc-cCCeEEEEcCCchHHHHHHHH
Confidence 34477788888888873 2 2688999999999999999965421111100 122345455555777665555
Q ss_pred ccCCCCcCCCCcCCCC--CeeEeeCCCHHHHHHhcCC----C-CeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCE
Q 013008 210 LTSKEHYRSPFEPVMP--GVNFVEYGNIEATRKLIQP----G-KTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGAL 282 (451)
Q Consensus 210 ~~~~~~~~~~~~~~~~--~~~~~~~~d~~~le~~l~~----~-~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~l 282 (451)
+.|-....-...|... +.. -|+++|++.|+. + .+.+|+..--..+.|.+-| +++|.++|++||++
T Consensus 200 ~lGlg~~~v~~Vp~d~~~~~~----md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDp----l~eI~~i~~~~~iw 271 (490)
T PLN02880 200 IAGIHPENCRLLKTDSSTNYA----LAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDP----LLELGKIAKSNGMW 271 (490)
T ss_pred HcCCCHHHEEEeecCCCcCCc----CCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCc----HHHHHHHHHHcCCE
Confidence 4432210000011111 111 178999998862 1 2445555444445577667 99999999999999
Q ss_pred EEEeccccCCCcccccccccccCC-Ccceeeec--ccccCCcccccccccH--HHHhhccCCC----c-----cCCC---
Q 013008 283 LVFDEVQCGLGRTGYLWAHEHYGI-FPDIMTLA--KPLAGGLPIGAALVTE--KVASAINYGD----H-----GSTF--- 345 (451)
Q Consensus 283 lI~DEv~tg~gr~G~~~~~~~~~~-~pdi~t~s--K~lg~G~~iG~v~~~~--~i~~~~~~~~----~-----~~t~--- 345 (451)
+++|-+|.|+-..-..+-....|+ ..|.+++. |.+...++.|+++.++ .+...+.... . ..++
T Consensus 272 lHVDaA~gg~~~~~~~~~~~l~gie~aDSit~d~HKwl~~P~~~g~llvr~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~ 351 (490)
T PLN02880 272 FHVDAAYAGSACICPEYRHYIDGVEEADSFNMNAHKWFLTNFDCSLLWVKDRNALIQSLSTNPEFLKNKASQANSVVDYK 351 (490)
T ss_pred EEEehhhHHHHHhCHHHHHHhcCchhcCEEEECchhhcCCCccEEEEEEeCHHHHHHHHccCHHHhcCccccccCCCChh
Confidence 999999876422211111112354 57877664 8887778888888763 2222221110 0 0000
Q ss_pred -----CCcHHHHHHHHHHHHHhcChHHHHH-------------HHhCCCCcceec-ccceeEEEEecC---C-------h
Q 013008 346 -----AGSPLVCNAAIAVLDKISNPAFLAS-------------KLARNPHVKDVR-GLGLIIGIEFDV---S-------A 396 (451)
Q Consensus 346 -----~~~~~~~aaa~aal~~~~~~~~~~~-------------~~~~~~~~~~v~-g~G~~~~~~~~~---~-------~ 396 (451)
.+..+.......+|+.+-.+++.+. .+++.+.+.-+. ....++.|.+.. . .
T Consensus 352 ~~~i~~~rr~~alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~~~~~~~iv~Fr~~~~~~~~~~~~~~n 431 (490)
T PLN02880 352 DWQIPLGRRFRSLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQDSRFEVVTPRIFSLVCFRLVPPKNNEDNGNKLN 431 (490)
T ss_pred ccCcCCCCcccHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCceEEEEEEEeCCCCChhhHHHHH
Confidence 1111122233334554433333322 333444333222 233344554421 1 1
Q ss_pred HHHHHHHHHCCcee-eec--CCCCEEEEeCC-CCCCHHHHHHHHHHHHHHHHHHhhc
Q 013008 397 TPVVDACRDSGLLV-LTA--GKGNVVRLVPP-LIISEQELDQAVEILCKTLPVLDSN 449 (451)
Q Consensus 397 ~~~~~~l~~~Gv~~-~~~--~~~~~iri~~~-~~~t~e~i~~~l~~l~~~l~~~~~~ 449 (451)
.++.++|.+.|-.. .+. ....++|+++. ...+++|++.+++.|.+..+++...
T Consensus 432 ~~l~~~l~~~g~~~v~~t~~~g~~~lR~~~~n~~tt~~di~~~~~~i~~~~~~~~~~ 488 (490)
T PLN02880 432 HDLLDAVNSSGKIFISHTVLSGKYVLRFAVGAPLTEERHVTAAWKVLQDEASKLLGK 488 (490)
T ss_pred HHHHHHHHhCCCEEEEEEEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 34666677666544 332 11257898764 4556799999999999988876543
No 338
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.34 E-value=5.6e-11 Score=117.82 Aligned_cols=294 Identities=14% Similarity=0.079 Sum_probs=165.3
Q ss_pred CCHHHHHHHHHHHhhc---ccccCCCCCHHHHHHHHHHhhccCC---CeEEec-CCHHHHHHHHHHHHHHHhhhcCCCCC
Q 013008 115 GDADWIKAVVDQANVL---THVSNMYYSIPQIELAKRLVACSFA---DRVFFS-NTGTEANEAAIKFARKFQRHSNPDSK 187 (451)
Q Consensus 115 ~~p~v~~a~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~~~~~---e~v~~~-~sG~eA~~~al~~a~~~~~~~~~~~~ 187 (451)
-+|+|.+|+.++.... .|.+ .-......+..+.++++++. ..|+|+ +|||.|++.++..+.
T Consensus 14 ~~~~v~~a~~~~~~~~~~~~hr~-~~f~~~~~~~r~~l~~l~~~~~~~~v~f~~gs~T~a~~~~~~~l~----------- 81 (361)
T TIGR01366 14 VRLEQLQALTTTAASLFGTSHRQ-APVKNLVGRVREGLAELFSLPDGYEVILGNGGATAFWDAATFGLI----------- 81 (361)
T ss_pred CCHHHHHHHHhcCccccccCcCC-hHHHHHHHHHHHHHHHHhCCCCCceEEEECCchhHHHHHHHHhcc-----------
Confidence 4788888877542111 1111 11223366777888888873 268775 669999999998553
Q ss_pred CCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEccccCCCCccccCHH
Q 013008 188 EPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKE 267 (451)
Q Consensus 188 ~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~ 267 (451)
.+ +.++...+.+|....-.+... |....+..++....+.++..+ ..++++|.+....+..|.+.|
T Consensus 82 -~~-~~l~i~~G~~~~~~~~~a~~~---------~~~~~~~~~~~~~~~~~~~~~-~~~~~lV~~~h~et~tG~~~p--- 146 (361)
T TIGR01366 82 -EK-KSLHLSFGEFSSKFAKAVKLA---------PWLGEPIIVTADPGSAPEPQA-DPGVDVIAWAHNETSTGVAVP--- 146 (361)
T ss_pred -cc-cccEEecCHHHHHHHHHHHhh---------hccCCceEEecCCCCCCCCcc-CCCCCEEEEcccCCccceecc---
Confidence 12 233333344443322222110 000011222211112222223 346788888887777888776
Q ss_pred HHHHHHHHHHHhCCEEEEeccccCCCcccccccccccCCCcceeeec--ccccCCcccccccccHHHHhhccCCC-----
Q 013008 268 FLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLA--KPLAGGLPIGAALVTEKVASAINYGD----- 340 (451)
Q Consensus 268 ~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~t~s--K~lg~G~~iG~v~~~~~i~~~~~~~~----- 340 (451)
+++| ++++|+++|+|-+++ +| +.....+ ..|++++| |.+++--.++.++.++++++.+.+..
T Consensus 147 -i~~I---~~~~g~~~iVDavqs-~g--~~~idv~----~~D~~~~s~~K~lg~~~Gl~~~~~s~~~~~~~~~~~~~~~~ 215 (361)
T TIGR01366 147 -VRRP---EGSDDALVVIDATSG-AG--GLPVDIA----ETDVYYFAPQKNFASDGGLWLAIMSPAALERIEAIAASGRW 215 (361)
T ss_pred -cccc---cccCCCeEEEEcCcc-cc--CCCCCHH----HCCEEEEEchhhcCCCCceEEEEECHHHHhhhhcccCCCCC
Confidence 5555 689999999999996 43 2222222 26888776 98874112444556887776654210
Q ss_pred ---------------ccCCCCCcHH-HHHHHHHHHHHhcCh-HHH---HH----------HHhCCCCcce-eccc----c
Q 013008 341 ---------------HGSTFAGSPL-VCNAAIAVLDKISNP-AFL---AS----------KLARNPHVKD-VRGL----G 385 (451)
Q Consensus 341 ---------------~~~t~~~~~~-~~aaa~aal~~~~~~-~~~---~~----------~~~~~~~~~~-v~g~----G 385 (451)
...|.+.+++ ...+..++++.+.+. ++. ++ .++..+.+.. +... .
T Consensus 216 ~p~~~d~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~ 295 (361)
T TIGR01366 216 VPEFLSLPTAVDNSLKNQTYNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSSSRLYSWAQERPYATPFVTDPGKRSQ 295 (361)
T ss_pred CchhhhHHHHHhccccCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhccc
Confidence 0233333333 334566777776543 221 21 1223332111 1111 1
Q ss_pred eeEEEEe--cCChHHHHHHHHHCCceeeecCC---CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 013008 386 LIIGIEF--DVSATPVVDACRDSGLLVLTAGK---GNVVRLVPPLIISEQELDQAVEILCKTLPVL 446 (451)
Q Consensus 386 ~~~~~~~--~~~~~~~~~~l~~~Gv~~~~~~~---~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~ 446 (451)
....+.+ +.+..++.+.|.++||.+.++.. +..+|++.....|++|+++++++|+++++++
T Consensus 296 ~v~~v~~~~g~~~~~v~~~L~~~gI~i~~~~~~l~~~~vRis~~~~~t~~di~~l~~al~~~~~~~ 361 (361)
T TIGR01366 296 VVGTIDFVDDIDAATVAKILRANGIVDTEPYRKLGRNQLRVAMFPAIDPDDVEALTECVDWVVERL 361 (361)
T ss_pred ceEEEECCCccCHHHHHHHHHHCCCeeccCccccCCCcEEEEcCCCCCHHHHHHHHHHHHHHHhhC
Confidence 1122333 24567888999999998876521 3579999999999999999999999988753
No 339
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.33 E-value=6.6e-12 Score=119.76 Aligned_cols=198 Identities=17% Similarity=0.164 Sum_probs=122.3
Q ss_pred CCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHhhccCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEE
Q 013008 115 GDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFV 194 (451)
Q Consensus 115 ~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii 194 (451)
.+|++.+++.++. . +.. .+...+...+|++++++.++.+.++|++||+.||..++++... +++.||
T Consensus 7 ~~~~m~~a~~~a~-~-gd~-~Yg~D~~~~~l~~~i~~l~g~e~a~f~~sGT~An~~al~~~~~-----------~~~~vi 72 (290)
T PF01212_consen 7 PTPAMLEAMAAAN-V-GDD-AYGEDPTTARLEERIAELFGKEAALFVPSGTMANQLALRAHLR-----------PGESVI 72 (290)
T ss_dssp S-HHEEHHHHHTT-S-B-C-CTTSSHHHHHHHHHHHHHHTSSEEEEESSHHHHHHHHHHHHHH-----------TTEEEE
T ss_pred CCHHHHHHHHccc-c-CCc-ccCCChhHHHHHHHHHHHcCCCEEEEeCCCChHHHHHHHHHHh-----------cCCcee
Confidence 6799999994433 2 121 2345666899999999999999999999999999999997763 467777
Q ss_pred EEcCC-ccCChhhhh-hccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCC-----CCeEEEEEccccCCCCccccCHH
Q 013008 195 SFTNS-FHGRTMGAL-ALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQP-----GKTAAVFVEPIQGEGGIYSATKE 267 (451)
Q Consensus 195 ~~~~~-yhg~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~-----~~~aavi~ep~~~~~G~~~~~~~ 267 (451)
..+++ .|.+..++. .++|..... .+...+-. -|+++|++.++. .++++|.+|......|+.+++.+
T Consensus 73 ~~~~aHi~~~E~ga~~~~~G~~~~~---l~~~~~G~----l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~ 145 (290)
T PF01212_consen 73 CADTAHIHFDETGAIEELSGAKLIP---LPSDDDGK----LTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLE 145 (290)
T ss_dssp EETTEHHHHSSTTHHHHHTTCEEEE---EBECTGTB----B-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HH
T ss_pred ccccceeeeeccchhhHhcCcEEEE---CCCcccCC----CCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHH
Confidence 77653 222222332 223221100 00001001 178999999873 46899999988777666789999
Q ss_pred HHHHHHHHHHHhCCEEEEeccccC--CCcccccccccccCCCcceeeecccccCCcccccc-cccHHHHhh
Q 013008 268 FLQFLRDACDDAGALLVFDEVQCG--LGRTGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAA-LVTEKVASA 335 (451)
Q Consensus 268 ~l~~l~~l~~~~g~llI~DEv~tg--~gr~G~~~~~~~~~~~pdi~t~sK~lg~G~~iG~v-~~~~~i~~~ 335 (451)
+|++|.++|++||+.|+.|-+--. ....|. ....+--..|++++|=+-++|.+.|.+ ++++++++.
T Consensus 146 el~ai~~~a~~~gl~lhmDGARl~~a~~~~~~--~~~e~~~~~D~v~~~~tK~~g~~~Gavl~~~~~~i~~ 214 (290)
T PF01212_consen 146 ELRAISELAREHGLPLHMDGARLANAAAALGV--SLAEIAAGADSVSFGGTKNGGAPGGAVLAGNKEFIAK 214 (290)
T ss_dssp HHHHHHHHHHHHT-EEEEEETTHHHHHCHHHH--HHHHHHTTSSEEEEETTSTT-SSSEEEEEESHHHHHH
T ss_pred HHHHHHHHHHhCceEEEEehhhHHHhhhcccc--cHHHHhhhCCEEEEEEEcccccccceEEEechHHHHH
Confidence 999999999999999999966310 001111 111222357888766444445566665 568885544
No 340
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.33 E-value=4.3e-10 Score=110.83 Aligned_cols=295 Identities=9% Similarity=-0.000 Sum_probs=171.8
Q ss_pred CCHHHHHHHHHHHhhcccccC----CCC--C---HHHHHHHHHHhhccCC---CeEEecCC-HHHHHHHHHHHHHHHhhh
Q 013008 115 GDADWIKAVVDQANVLTHVSN----MYY--S---IPQIELAKRLVACSFA---DRVFFSNT-GTEANEAAIKFARKFQRH 181 (451)
Q Consensus 115 ~~p~v~~a~~~~~~~~~~~~~----~~~--~---~~~~~l~~~l~~~~~~---e~v~~~~s-G~eA~~~al~~a~~~~~~ 181 (451)
.|..|++++.+.+..+..... ..+ . ....++.+.|.++++. ..|+|++| ||+|+++++.....
T Consensus 3 ~p~~v~~~~~~~~~~~~~~~~~~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgT~a~ea~~~nl~~---- 78 (349)
T TIGR01364 3 LPEEVLEQAQKELLNFNGTGMSVMEISHRSKEFEAVANEAESDLRELLNIPDNYEVLFLQGGATGQFAAVPLNLLA---- 78 (349)
T ss_pred CCHHHHHHHHHHHhCccCCCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCC----
Confidence 355788888888764321111 111 1 2356677778787762 35777655 99999999986542
Q ss_pred cCCCCCCCCceEEEEcCCccCChhhhhhcc-CCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEccccCCCC
Q 013008 182 SNPDSKEPATEFVSFTNSFHGRTMGALALT-SKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGG 260 (451)
Q Consensus 182 ~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~~~~~G 260 (451)
+++++++...++.|....-+.-. +..... ...+ ..++.+..++++.....++.+|.+.-+-..+|
T Consensus 79 -------~~~~~l~i~~G~fg~r~~~~a~~~g~~~~~----~~~~---~~~~~~~~~~~~~~~~~~~~~v~~th~ETstG 144 (349)
T TIGR01364 79 -------EGKVADYIVTGAWSKKAAKEAKKYGVVNVV----ASGK---EGNYTKIPDPSTWEISEDAAYVHYCANETIHG 144 (349)
T ss_pred -------CCCeEEEEECCHHHHHHHHHHHHhCCcEEE----eccc---cCCCCCCCCHHhcCCCCCCCEEEEcCCCCccc
Confidence 47788888777766654322211 111000 0000 01233333333222233566666666655666
Q ss_pred ccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccccccCCCcceeeec--ccccCCcccccccccHHHHhhccC
Q 013008 261 IYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLA--KPLAGGLPIGAALVTEKVASAINY 338 (451)
Q Consensus 261 ~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~t~s--K~lg~G~~iG~v~~~~~i~~~~~~ 338 (451)
...+ ++++.+++++|+|-+++ +| +...-.+.+ |++++| |++|. -.+|++.+++++.+.+.+
T Consensus 145 v~~~---------~l~~~~~~l~iVDavss-~g--~~~id~~~~----d~~~~ssqK~lgP-~Glg~l~~s~~~~~~~~~ 207 (349)
T TIGR01364 145 VEFR---------ELPDVKNAPLVADMSSN-IL--SRPIDVSKF----GLIYAGAQKNIGP-AGLTVVIVRKDLLGRASR 207 (349)
T ss_pred Eecc---------eecccCCCeEEEEcccc-cc--CccCCHHHc----cEEEEecccccCC-CceEEEEECHHHHhhccc
Confidence 6433 67778899999999986 43 222222322 366665 98862 347888899988876643
Q ss_pred CC-----------ccCCC-CCcHHHHHHHHHHHHHhcCh-HHHHH-------------HHhCCCCc-ce-ec--ccc-ee
Q 013008 339 GD-----------HGSTF-AGSPLVCNAAIAVLDKISNP-AFLAS-------------KLARNPHV-KD-VR--GLG-LI 387 (451)
Q Consensus 339 ~~-----------~~~t~-~~~~~~~aaa~aal~~~~~~-~~~~~-------------~~~~~~~~-~~-v~--g~G-~~ 387 (451)
.. ...++ +.|.....+..++|+.+.++ ++... .++.++.+ .. .. ... ..
T Consensus 208 ~~~~~~~~~~~~~~~~~~~Tp~~~~i~al~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~v 287 (349)
T TIGR01364 208 ITPSMLNYKIHAENDSMYNTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQLLYDTIDNSNGFYRNPVDPRNRSRMN 287 (349)
T ss_pred CCCCcchHHHHHhcCCCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCHHHcCCeE
Confidence 20 11223 34556667777888887654 33221 23444422 11 11 112 34
Q ss_pred EEEEecC--ChHHHHHHHHHCCceeeecCC-CCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q 013008 388 IGIEFDV--SATPVVDACRDSGLLVLTAGK-GNVVRLVPPLIISEQELDQAVEILCKTLP 444 (451)
Q Consensus 388 ~~~~~~~--~~~~~~~~l~~~Gv~~~~~~~-~~~iri~~~~~~t~e~i~~~l~~l~~~l~ 444 (451)
..|.++. ...++.+.+.++|+.+.++.. .+.+|+++....|+||||.+++.|+++++
T Consensus 288 ~sf~~~~~~~~~~~~~~~~~~Gi~~~~~~~~~g~vRvS~~~~nt~edid~l~~al~~~~~ 347 (349)
T TIGR01364 288 VVFTLGNEELEKRFLKEAEERGLVSLKGHRSVGGMRASIYNAMPLEGVQALVDFMKEFQK 347 (349)
T ss_pred EEEecCChhHhHHHHHHHHHCCCcccCCccccCeeEEECcCCCCHHHHHHHHHHHHHHHH
Confidence 5555431 125666788889995555532 36899999999999999999999998765
No 341
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.33 E-value=1.1e-11 Score=119.58 Aligned_cols=203 Identities=18% Similarity=0.151 Sum_probs=119.0
Q ss_pred CCHHHHHHHHHHhhccCCCeEEe-cCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCC-CC
Q 013008 138 YSIPQIELAKRLVACSFADRVFF-SNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK-EH 215 (451)
Q Consensus 138 ~~~~~~~l~~~l~~~~~~e~v~~-~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~-~~ 215 (451)
+.....++.+.+++.++.+++++ ++|+++|+..++..+. .++|+|++..++|... ..++.+.+. +.
T Consensus 57 ~~g~i~~~~~~~A~~~ga~~~~~~~~Gst~a~~~~l~al~-----------~~gd~Vlv~~~~h~s~-~~~~~~~g~~~~ 124 (294)
T cd00615 57 PTGPIKEAQELAARAFGAKHTFFLVNGTSSSNKAVILAVC-----------GPGDKILIDRNCHKSV-INGLVLSGAVPV 124 (294)
T ss_pred CChHHHHHHHHHHHHhCCCCEEEEcCcHHHHHHHHHHHcC-----------CCCCEEEEeCCchHHH-HHHHHHCCCEEE
Confidence 34457788888999888766665 8989999999988654 1688999998876443 334444332 11
Q ss_pred cCCCCcCCCCCeeEeeCCCHHHHHHhcCC-CCeEEEEE-ccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccC-C
Q 013008 216 YRSPFEPVMPGVNFVEYGNIEATRKLIQP-GKTAAVFV-EPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCG-L 292 (451)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~d~~~le~~l~~-~~~aavi~-ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg-~ 292 (451)
+... ....+.......|+++++++++. .++++|++ .| + ..|...+ +++|.++|++||+++|+||+|.. +
T Consensus 125 ~v~~--~~~~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~~p-~-~~G~~~d----l~~I~~~~~~~g~~livDeA~~~~~ 196 (294)
T cd00615 125 YLKP--ERNPYYGIAGGIPPETFKKALIEHPDAKAAVITNP-T-YYGICYN----LRKIVEEAHHRGLPVLVDEAHGAHF 196 (294)
T ss_pred EecC--ccCcccCcCCCCCHHHHHHHHHhCCCceEEEEECC-C-CCCEecC----HHHHHHHHHhcCCeEEEECcchhhh
Confidence 1100 00011000011379999999863 34555444 44 2 3576665 99999999999999999999964 2
Q ss_pred CcccccccccccCCCccee--eecccccCCcccccc-cccHHHH--hhccCC-CccCCCCCcHHHHHHHHHHHHHh
Q 013008 293 GRTGYLWAHEHYGIFPDIM--TLAKPLAGGLPIGAA-LVTEKVA--SAINYG-DHGSTFAGSPLVCNAAIAVLDKI 362 (451)
Q Consensus 293 gr~G~~~~~~~~~~~pdi~--t~sK~lg~G~~iG~v-~~~~~i~--~~~~~~-~~~~t~~~~~~~~aaa~aal~~~ 362 (451)
...+. ..........|++ +++|+++ |++.|++ ..+++.. +.+... ....|.+.+.+.+++..++++.+
T Consensus 197 ~~~~~-~~~~~~~~~~div~~S~hK~l~-g~~~~~~l~~~~~~~~~~~~~~~~~~~~ttsps~~~~asl~~a~~~~ 270 (294)
T cd00615 197 RFHPI-LPSSAAMAGADIVVQSTHKTLP-ALTQGSMIHVKGDLVNPDRVNEALNLHQSTSPSYLILASLDVARAMM 270 (294)
T ss_pred ccCcc-cCcchhhcCCcEEEEchhcccc-hHhHHHHHHhCCCcCCHHHHHHHHHHHCCCCcHHHHHHHHHHHHHHH
Confidence 22221 1111112245665 5679874 4555444 3443321 112111 12234455666677777777765
No 342
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.31 E-value=1.6e-09 Score=99.81 Aligned_cols=263 Identities=21% Similarity=0.225 Sum_probs=159.5
Q ss_pred CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEee--C
Q 013008 155 ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVE--Y 232 (451)
Q Consensus 155 ~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 232 (451)
..-.++..||+.+.+.|+--.. .|+|+|+++.-+-.|....-+.- .+..++..++ +
T Consensus 68 ~~tf~isgsGh~g~E~al~N~l-----------ePgd~vLv~~~G~wg~ra~D~~~-----------r~ga~V~~v~~~~ 125 (385)
T KOG2862|consen 68 AQTFVISGSGHSGWEAALVNLL-----------EPGDNVLVVSTGTWGQRAADCAR-----------RYGAEVDVVEADI 125 (385)
T ss_pred CceEEEecCCcchHHHHHHhhc-----------CCCCeEEEEEechHHHHHHHHHH-----------hhCceeeEEecCc
Confidence 3456777889999999987655 27999999877665543222111 1112222222 1
Q ss_pred C---CHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccccccCCCcc
Q 013008 233 G---NIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPD 309 (451)
Q Consensus 233 ~---d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pd 309 (451)
. .++.+++.+..+++.+|++.-.-+.+|+..+ .++..-++|++|+++|++|-|-+ +| |..|.++.+|+..-
T Consensus 126 G~~~~le~i~~~lsqh~p~~vfv~hgdsSTgV~q~---~~~~~g~lc~k~~~lllVD~VaS-lg--gt~F~mDewgVDva 199 (385)
T KOG2862|consen 126 GQAVPLEEITEKLSQHKPKAVFVTHGDSSTGVLQD---LLAISGELCHKHEALLLVDTVAS-LG--GTEFEMDEWGVDVA 199 (385)
T ss_pred ccCccHHHHHHHHHhcCCceEEEEecCccccccch---HHHHHHHHhhcCCeEEEEechhh-cC--CccceehhhcccEE
Confidence 1 5899999998888899998888778887544 36677899999999999999986 53 56678888886554
Q ss_pred eeeecccccCCcccccccccHHHHhhccCCCc-----------------------cCCCCCcHHHHHHHHHHHHHhcChH
Q 013008 310 IMTLAKPLAGGLPIGAALVTEKVASAINYGDH-----------------------GSTFAGSPLVCNAAIAVLDKISNPA 366 (451)
Q Consensus 310 i~t~sK~lg~G~~iG~v~~~~~i~~~~~~~~~-----------------------~~t~~~~~~~~aaa~aal~~~~~~~ 366 (451)
...--|++++--.++-+..++..+++++.... .+-+..+.-......++|..+-+++
T Consensus 200 ytgSQKaL~aP~GLsiisfS~ka~~~~~~rK~~~~~~yFd~~~~~~~wgc~~e~~~yhhT~pv~lly~Lr~AL~~I~eeG 279 (385)
T KOG2862|consen 200 YTGSQKALGAPAGLSIISFSDKALEAIRDRKTKPVSFYFDILRLGNFWGCDGEPRAYHHTPPVQLLYSLRAALALIAEEG 279 (385)
T ss_pred EecchhhcCCCCCcceeecCHHHHHHHhhccCCceEEEEeHHhhcchhccCCcccccccCCcHHHHHHHHHHHHHHHHHH
Confidence 44556999852223336667776666643210 0111122334455667777665554
Q ss_pred HHHH-------------HHhCCCCcce-ecc---cceeEEEEe--cCChHHHHHHHHHCCceeeecCC----CCEEEEeC
Q 013008 367 FLAS-------------KLARNPHVKD-VRG---LGLIIGIEF--DVSATPVVDACRDSGLLVLTAGK----GNVVRLVP 423 (451)
Q Consensus 367 ~~~~-------------~~~~~~~~~~-v~g---~G~~~~~~~--~~~~~~~~~~l~~~Gv~~~~~~~----~~~iri~~ 423 (451)
+.+. -++.+..--. +.. .-....+.. ..+..+++..+..++.....++- +.++||-.
T Consensus 280 L~~~~~rH~e~s~~l~~~l~~~GLq~fv~~e~~rlptvttv~vp~gvDw~dVv~~~~~~~~vei~gglg~~~gKv~RIGl 359 (385)
T KOG2862|consen 280 LENSWRRHREMSKWLKLSLEALGLQLFVVDEELRLPTVTTVKVPYGVDWKDVVAYAMSHYVVEIGGGLGPTVGKVFRIGL 359 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCccceecChhhccCcceeeecCCCCCHHHHHHHHHHhcCEEeccccCCCcccEEEEEE
Confidence 4332 1111110000 000 001111111 25678899999988554443332 46788853
Q ss_pred -CCCCCHHHHHHHHHHHHHHHHH
Q 013008 424 -PLIISEQELDQAVEILCKTLPV 445 (451)
Q Consensus 424 -~~~~t~e~i~~~l~~l~~~l~~ 445 (451)
.-..+.|.|+..++.|+.++.+
T Consensus 360 ~gcna~~e~i~~v~~ll~~alq~ 382 (385)
T KOG2862|consen 360 LGCNANVEYIDNVVELLKLALQR 382 (385)
T ss_pred eeccCCcHHHHHHHHHHHHHHhh
Confidence 3345778899999999988865
No 343
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.29 E-value=1.4e-09 Score=118.51 Aligned_cols=320 Identities=13% Similarity=0.071 Sum_probs=177.3
Q ss_pred CEEEeeccCcccccCCCCCH-HHHHHHHHHHhhcccccCC-C-----CCHHHHHHHHHHhhccC--C-C-eEEecCCHHH
Q 013008 98 REYLDLSSGIAVNALGHGDA-DWIKAVVDQANVLTHVSNM-Y-----YSIPQIELAKRLVACSF--A-D-RVFFSNTGTE 166 (451)
Q Consensus 98 ~~~iD~~~~~~~~~lG~~~p-~v~~a~~~~~~~~~~~~~~-~-----~~~~~~~l~~~l~~~~~--~-e-~v~~~~sG~e 166 (451)
.-|+|..+... .+| .|.+++.+........... + ......+..++++++++ . + .|+||+++|+
T Consensus 35 ~iYLD~Aatt~------~~~~~V~~~~~~~~~~~~~np~s~~~~s~~~~~~~e~aR~~ia~~lga~~~~~~VvFtsnaT~ 108 (805)
T PLN02724 35 VVYLDHAGATL------YSESQLEAALADFSSNVYGNPHSQSDSSMRSSDTIESARQQVLEYFNAPPSDYACVFTSGATA 108 (805)
T ss_pred CEeEeCCCCCC------CCHHHHHHHHHHHHhhccCCCCcCcchhhhHHHHHHHHHHHHHHHhCCCccceEEEEeCChHH
Confidence 68999776432 344 4445454544432111111 1 12236677788888887 3 3 5899999999
Q ss_pred HHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCC-------CeeEeeCCCHHHHH
Q 013008 167 ANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMP-------GVNFVEYGNIEATR 239 (451)
Q Consensus 167 A~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~d~~~le 239 (451)
|+..+..... + .+++.||+ ....|........+.........+.+... ....+. .+.++|+
T Consensus 109 alnlva~~l~-~---------~~gd~Iv~-t~~eH~svl~~~~~a~~~G~~v~~v~~~~~~~~~~~~~g~~~-~~~~~l~ 176 (805)
T PLN02724 109 ALKLVGETFP-W---------SSESHFCY-TLENHNSVLGIREYALEKGAAAIAVDIEEAANQPTNSQGSVV-VKSRGLQ 176 (805)
T ss_pred HHHHHHHHCC-C---------CCCCeEEE-eeccccchHHHHHHHHHcCCeEEeccchhccccccccccccc-cchhhhh
Confidence 9998866431 1 14677776 45666655433222110000000111110 000000 0124455
Q ss_pred HhcC---------CCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHh--------CCEEEEeccccCCCccccccccc
Q 013008 240 KLIQ---------PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDA--------GALLVFDEVQCGLGRTGYLWAHE 302 (451)
Q Consensus 240 ~~l~---------~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~--------g~llI~DEv~tg~gr~G~~~~~~ 302 (451)
+.+. ..++.+|.+..+.+..|.+.| ++.+.++++.. ++++++|-+|+ +|.. ..+
T Consensus 177 ~~~~~~l~~~~~~~~~t~LVa~~~vsN~tG~i~p----i~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~-~g~~----piD 247 (805)
T PLN02724 177 RRNTSKLQKREDDGEAYNLFAFPSECNFSGAKFP----LDLVKLIKDNQHSNFSKSGRWMVLLDAAKG-CGTS----PPD 247 (805)
T ss_pred hhhhhhhccccccCCCcceEEEEccccCCCCcCC----HHHHHHHHHhcccccccCcceEEEeehhhh-cCCC----CCC
Confidence 5431 134568888888888898887 66554444432 36899999985 4322 222
Q ss_pred ccCCCcceeeec--ccccCCcccccccccHHHHhhccCCCccC-C---------C--------------CCcHHHHHHHH
Q 013008 303 HYGIFPDIMTLA--KPLAGGLPIGAALVTEKVASAINYGDHGS-T---------F--------------AGSPLVCNAAI 356 (451)
Q Consensus 303 ~~~~~pdi~t~s--K~lg~G~~iG~v~~~~~i~~~~~~~~~~~-t---------~--------------~~~~~~~aaa~ 356 (451)
...+.+|++++| |.+|+-..+|++++++++.+.+.+...++ + + +.|.++.++..
T Consensus 248 v~~~~~Dfl~~S~HK~~GgP~G~G~L~vr~~~~~~l~p~~~GGg~~~~~~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l~ 327 (805)
T PLN02724 248 LSRYPADFVVVSFYKIFGYPTGLGALLVRRDAAKLLKKKYFGGGTVAASIADIDFVKRRERVEQRFEDGTISFLSIAALR 327 (805)
T ss_pred hhhcCCCEEEEecceeccCCCCceEEEEehhhhhhhcCCccCCCceEEEecccceeeccccHHHHhcCCCcchhHHHHHH
Confidence 234568999887 87764356899999988877665432211 1 1 23556666677
Q ss_pred HHHHHhcC---hHHHHH----------HHhCCC------Cccee---------cccceeEEEEec-CC-----hHHHHHH
Q 013008 357 AVLDKISN---PAFLAS----------KLARNP------HVKDV---------RGLGLIIGIEFD-VS-----ATPVVDA 402 (451)
Q Consensus 357 aal~~~~~---~~~~~~----------~~~~~~------~~~~v---------~g~G~~~~~~~~-~~-----~~~~~~~ 402 (451)
++++.+.+ +...++ .+++++ .+.-+ ...+.++.|.+. .+ ...+...
T Consensus 328 aal~~l~~ig~~~I~~~~~~L~~~l~~~L~~l~~~~g~~~v~iyg~~~~~~~~~~r~~ivsFnv~~~~~~~v~~~~v~~l 407 (805)
T PLN02724 328 HGFKLLNRLTISAIAMHTWALTHYVANSLRNLKHGNGAPVCVLYGNHTFKLEFHIQGPIVTFNLKRADGSWVGHREVEKL 407 (805)
T ss_pred HHHHHHHHhChHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCCCCCcccccCEEEEEEEcCCCCEeCHHHHHHH
Confidence 77777644 222222 122332 22211 124556666662 22 2333333
Q ss_pred HHHCCceeeecC--------------------------------------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q 013008 403 CRDSGLLVLTAG--------------------------------------KGNVVRLVPPLIISEQELDQAVEILCKTLP 444 (451)
Q Consensus 403 l~~~Gv~~~~~~--------------------------------------~~~~iri~~~~~~t~e~i~~~l~~l~~~l~ 444 (451)
+-++||.++.+. ..+.+|+++.+..|.||||++++.|++.+-
T Consensus 408 ~~~~gI~vR~G~~Ca~~~~~~~lg~~~~~l~~~~~~~~~c~~~~~~~~~~~~G~vRvS~g~ynt~eDvd~lv~~l~~~~~ 487 (805)
T PLN02724 408 ASLSGIQLRTGCFCNPGACAKYLGLSHKDLQANFEAGHVCWDDQDVIHGRPTGAVRVSFGYMSTFEDCQKFIDFIISSFV 487 (805)
T ss_pred HHhcCcEEeeccccCchHHHHHcCCCHHHHHHHhhcCCccCchhheecCcccceEEEEcCccCCHHHHHHHHHHHHHHhh
Confidence 345687775431 015799999999999999999999999763
No 344
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.29 E-value=5.2e-10 Score=101.09 Aligned_cols=276 Identities=18% Similarity=0.188 Sum_probs=170.0
Q ss_pred HHHHHHHHHHhhccCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCC
Q 013008 140 IPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSP 219 (451)
Q Consensus 140 ~~~~~l~~~l~~~~~~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~ 219 (451)
++..++-+.|+++++.|.+.+|++.-+|-.+++..+. .++..++.+..-|-.+..+....+......+
T Consensus 61 PpI~~F~~dlaeFlg~D~~R~t~GARe~KfavMhal~------------~~gd~vV~D~~aHYttyvAAEragl~v~eVp 128 (382)
T COG1103 61 PPIKDFLEDLAEFLGMDEVRVTAGAREAKFAVMHALC------------KEGDWVVVDSLAHYTTYVAAERAGLNVAEVP 128 (382)
T ss_pred CcHHHHHHHHHHHhCCceeeecccchhhHHHHHHHhc------------cCCCEEEEcCcchHHHHHHHHhcCCeEEecC
Confidence 3466777789999999999999999999998888666 3556778888888777666554443322211
Q ss_pred CcCCCCCeeEeeCCCHHHHHHhc----CC--CCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCC
Q 013008 220 FEPVMPGVNFVEYGNIEATRKLI----QP--GKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLG 293 (451)
Q Consensus 220 ~~~~~~~~~~~~~~d~~~le~~l----~~--~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~g 293 (451)
. ...|.... +++...+.| +. +.++..++.-+-++-|.+.. -+.++++|+++|++++..-+|+ .|
T Consensus 129 ~-tg~Pey~i----~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl~D----akkva~ic~e~gvPlllN~AYt-~G 198 (382)
T COG1103 129 N-TGYPEYKI----TPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNLAD----AKKVAKICREYGVPLLLNCAYT-VG 198 (382)
T ss_pred C-CCCCceEe----cHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCchh----hHHHHHHHHHcCCceEeeccee-ec
Confidence 0 11122222 344444444 32 34777777777788787766 8899999999999999999997 55
Q ss_pred cccccccccccCCCcceeeec--ccccCCcccccccccHHHHhhccCCC-----------ccCCCCCcHHHHHHHH--HH
Q 013008 294 RTGYLWAHEHYGIFPDIMTLA--KPLAGGLPIGAALVTEKVASAINYGD-----------HGSTFAGSPLVCNAAI--AV 358 (451)
Q Consensus 294 r~G~~~~~~~~~~~pdi~t~s--K~lg~G~~iG~v~~~~~i~~~~~~~~-----------~~~t~~~~~~~~aaa~--aa 358 (451)
|.- .....+.+|+++=| |++++.-|+|.+..++++.+.+-..+ .+-|-.|.|+....|- .+
T Consensus 199 rmp----vs~ke~g~DFiVgSGHKsmAAs~PiGvl~~~eE~ae~V~r~Sg~~~~~KEvellGCT~rGapivTlmASfP~V 274 (382)
T COG1103 199 RMP----VSGKEIGADFIVGSGHKSMAASAPIGVLAMSEEWAEIVLRRSGRAFPKKEVELLGCTVRGAPIVTLMASFPHV 274 (382)
T ss_pred ccc----ccccccCCCEEEecCccchhccCCeeEEeehhHHHHHHHhhcccccccceeeeecccccCchHHHHHhcCHHH
Confidence 542 33345679988776 88887669999999998887652211 1223334444322221 22
Q ss_pred HHHhcChHHHHH---------HHhCCCCcce--ecccc-eeEEEEec----------CChHHHHHHHHHCCcee-eecCC
Q 013008 359 LDKISNPAFLAS---------KLARNPHVKD--VRGLG-LIIGIEFD----------VSATPVVDACRDSGLLV-LTAGK 415 (451)
Q Consensus 359 l~~~~~~~~~~~---------~~~~~~~~~~--v~g~G-~~~~~~~~----------~~~~~~~~~l~~~Gv~~-~~~~~ 415 (451)
.+.+. .|.+. -++++..+.. .++.- -++.|+.. ...--+.++|.++||.- .|+..
T Consensus 275 ~eRVk--rWdeEv~kaR~fv~elEkigg~~qlG~rPk~HdLm~Fetp~f~eIakk~~r~gyFlY~ELK~RgI~GI~~G~T 352 (382)
T COG1103 275 VERVK--RWDEEVEKARWFVAELEKIGGVKQLGERPKNHDLMKFETPVFHEIAKKHKRKGYFLYEELKKRGIHGIQPGQT 352 (382)
T ss_pred HHHHH--HHHHHHHHHHHHHHHHHHhhhHHHhCCCCcccceeeecCchHHHHHHhCcCCceeeHHHHHhcCccccccCce
Confidence 22221 22221 2233321111 11111 11222211 11223667888898864 44433
Q ss_pred CCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 013008 416 GNVVRLVPPLIISEQELDQAVEILCKTLPV 445 (451)
Q Consensus 416 ~~~iri~~~~~~t~e~i~~~l~~l~~~l~~ 445 (451)
..+.++ -+..+.|+++..++++++++++
T Consensus 353 -k~~K~s-vyGl~~Eqve~V~~afkeI~ek 380 (382)
T COG1103 353 -KYFKLS-VYGLSWEQVEYVVDAFKEIAEK 380 (382)
T ss_pred -eEEEEE-eecCCHHHHHHHHHHHHHHHHh
Confidence 556665 5688999999999999998875
No 345
>PLN02590 probable tyrosine decarboxylase
Probab=99.28 E-value=3.2e-09 Score=109.26 Aligned_cols=294 Identities=15% Similarity=0.100 Sum_probs=165.9
Q ss_pred CHHHHHHHHHHhhccC-CC--------eEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhh
Q 013008 139 SIPQIELAKRLVACSF-AD--------RVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALA 209 (451)
Q Consensus 139 ~~~~~~l~~~l~~~~~-~e--------~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~ 209 (451)
+..+.++.++|++.++ ++ .-+|++||++||..|+.+||.......+... ..+-++..+..-|-+..-+..
T Consensus 169 t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~-~~~~vvy~S~~aH~Sv~KAa~ 247 (539)
T PLN02590 169 TELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTL-LPQLVVYGSDQTHSSFRKACL 247 (539)
T ss_pred HHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccC-CCCEEEEecCCchHHHHHHHH
Confidence 3446777788888887 32 3678999999999999999975432111100 112344445445665554544
Q ss_pred ccCCCCcCCCCcCCCCCeeEeeC-------CCHHHHHHhcCC----C-CeEEEEEccccCCCCccccCHHHHHHHHHHHH
Q 013008 210 LTSKEHYRSPFEPVMPGVNFVEY-------GNIEATRKLIQP----G-KTAAVFVEPIQGEGGIYSATKEFLQFLRDACD 277 (451)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~le~~l~~----~-~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~ 277 (451)
+.|-.. ..++.+|. -|+++|+++|+. . .+.+|+..--..+.|.+=| |++|.++|+
T Consensus 248 ilGlg~---------~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDp----l~~Ia~i~~ 314 (539)
T PLN02590 248 IGGIHE---------ENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDP----LVPLGNIAK 314 (539)
T ss_pred HcCCCc---------ccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCC----HHHHHHHHH
Confidence 433211 11222222 178999999852 1 2344444433344566555 999999999
Q ss_pred HhCCEEEEeccccCCCcccccccccccCC-Ccceeeec--ccccCCcccccccccH--HHHhhccCC----Cc-------
Q 013008 278 DAGALLVFDEVQCGLGRTGYLWAHEHYGI-FPDIMTLA--KPLAGGLPIGAALVTE--KVASAINYG----DH------- 341 (451)
Q Consensus 278 ~~g~llI~DEv~tg~gr~G~~~~~~~~~~-~pdi~t~s--K~lg~G~~iG~v~~~~--~i~~~~~~~----~~------- 341 (451)
+||+||++|-+|.|+...-+.+..-..|+ ..|-+++. |.+...++.|.++.++ .+.+.+... ..
T Consensus 315 ~~g~WlHVDaA~GG~al~~~~~r~~~~Gie~ADSit~D~HK~l~~p~~cg~llvr~~~~l~~a~~~~~~YL~~~~~~~~~ 394 (539)
T PLN02590 315 KYGIWLHVDAAYAGNACICPEYRKFIDGIENADSFNMNAHKWLFANQTCSPLWVKDRYSLIDALKTNPEYLEFKVSKKDT 394 (539)
T ss_pred HhCCeEEEecchhhhhhcChhhHHHhcCCccCCEEEECchhhcCcCcCEEEEEecCHHHHHHHhhcCHHHhCCccccccc
Confidence 99999999999987632221111112244 36766654 8887778889888764 233322110 00
Q ss_pred ---cC--CCC-CcHHHHHHHHHHHHHhcChHHHHH-------------HHhCCCCcceecc-cceeEEEEecC---C---
Q 013008 342 ---GS--TFA-GSPLVCNAAIAVLDKISNPAFLAS-------------KLARNPHVKDVRG-LGLIIGIEFDV---S--- 395 (451)
Q Consensus 342 ---~~--t~~-~~~~~~aaa~aal~~~~~~~~~~~-------------~~~~~~~~~~v~g-~G~~~~~~~~~---~--- 395 (451)
.. +.. +-.+.......+|+.+-.+.+.+. +++..|.+.-+.. .-.++.|.+.. .
T Consensus 395 ~~d~~d~~i~lsRr~raLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~~~fel~~~~~l~iVcFr~~~~~~~~~~ 474 (539)
T PLN02590 395 VVNYKDWQISLSRRFRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVTTRYFSLVCFRLAPVDGDEDQ 474 (539)
T ss_pred CCCccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceEEEEEEecCCCCCHHH
Confidence 00 111 123444455556665544444333 3334443332222 22223333311 1
Q ss_pred ----hHHHHHHHHHCCceee-ec---CCCCEEEEeC-CCCCCHHHHHHHHHHHHHHHHHHh
Q 013008 396 ----ATPVVDACRDSGLLVL-TA---GKGNVVRLVP-PLIISEQELDQAVEILCKTLPVLD 447 (451)
Q Consensus 396 ----~~~~~~~l~~~Gv~~~-~~---~~~~~iri~~-~~~~t~e~i~~~l~~l~~~l~~~~ 447 (451)
..++.+++.+.|..+. +. +. .++|+++ +..++++||+.+++.|.+...++-
T Consensus 475 ~~~ln~~l~~~l~~~G~~~vs~t~~~g~-~~lR~~i~n~~T~~~dv~~~~~~i~~~a~~~~ 534 (539)
T PLN02590 475 CNERNRELLAAVNSTGKIFISHTALSGK-FVLRFAVGAPLTEEKHVTEAWQIIQKHASKFT 534 (539)
T ss_pred HHHHHHHHHHHHHhCCCEEEEeeEECCE-EEEEEEecCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 2356677777786543 32 22 4688865 667789999999999999877764
No 346
>PLN02263 serine decarboxylase
Probab=99.27 E-value=4.4e-09 Score=105.72 Aligned_cols=272 Identities=14% Similarity=0.101 Sum_probs=162.3
Q ss_pred HHHHHHHHhhccCC--C--eEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcC
Q 013008 142 QIELAKRLVACSFA--D--RVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYR 217 (451)
Q Consensus 142 ~~~l~~~l~~~~~~--e--~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~ 217 (451)
+.++.++++++++. + +-++|+||||||..|+.++|.+. .+.+++.+..-|-+..-+..+-+-....
T Consensus 135 E~~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe~~----------~~~vvy~S~~aH~Sv~KAa~llgi~~~~ 204 (470)
T PLN02263 135 EVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVF----------PDGILYASRESHYSVFKAARMYRMECVK 204 (470)
T ss_pred HHHHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHhhc----------CCcEEEEcCCccHHHHHHHHhcCCcceE
Confidence 66777788888763 2 47899999999999999999753 2346777777776665555544332111
Q ss_pred CCCcCCCCCeeEeeCCCHHHHHHhcCCCC--eEEEEEccccCCCCccccCHHHHHHHHHHHHHhCC-----EEEEecccc
Q 013008 218 SPFEPVMPGVNFVEYGNIEATRKLIQPGK--TAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGA-----LLVFDEVQC 290 (451)
Q Consensus 218 ~~~~~~~~~~~~~~~~d~~~le~~l~~~~--~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~-----llI~DEv~t 290 (451)
.|...... -|+++|++.|..+. +.+|+..--.-+.|.+=| +++|.++|++||+ +|++|-++.
T Consensus 205 ---Vp~d~~g~----mD~~aL~~aI~~d~~~P~iVvataGTT~~GAiDp----i~eIa~i~~~~g~~~~~iwlHVDAA~G 273 (470)
T PLN02263 205 ---VDTLVSGE----IDCADFKAKLLANKDKPAIINVNIGTTVKGAVDD----LDLVIKTLEECGFSQDRFYIHCDGALF 273 (470)
T ss_pred ---eccCCCCc----CcHHHHHHHHHhCCCCcEEEEEEecCCCCcCCCC----HHHHHHHHHHcCCccCCeeEEEeccch
Confidence 12111111 18999999886432 444444433334466555 9999999999997 999999998
Q ss_pred CCCc----ccccccccccCCCcceeeec--ccccCCcccccccccHHHHhhccCC-----CccCCCCCc--HHHHHHHHH
Q 013008 291 GLGR----TGYLWAHEHYGIFPDIMTLA--KPLAGGLPIGAALVTEKVASAINYG-----DHGSTFAGS--PLVCNAAIA 357 (451)
Q Consensus 291 g~gr----~G~~~~~~~~~~~pdi~t~s--K~lg~G~~iG~v~~~~~i~~~~~~~-----~~~~t~~~~--~~~~aaa~a 357 (451)
|+-. .-..+. +....|-++++ |.++..++.|.++.+++..+.+... ..-.|..++ ....+...+
T Consensus 274 G~~lPf~~~~~~~d---f~~~vDSIsvD~HK~l~~P~~cgvll~R~~~~~~~~~~~~Yl~~~d~ti~gSR~g~~al~lW~ 350 (470)
T PLN02263 274 GLMMPFVKRAPKVT---FKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWY 350 (470)
T ss_pred hhHhhhcccccccC---CCcCccEEEECCccccCCCcCEEEEEEehhhHhhhccChHhhCCCCCCcCCCCCcHHHHHHHH
Confidence 7521 100111 11125656655 8877678999999887655444221 011123222 223455566
Q ss_pred HHHHhcChHHHHH-------------HHhCCCCcceecccceeEEEEecCChHHHHHHHHHCCceeeecCCCCEEEEeCC
Q 013008 358 VLDKISNPAFLAS-------------KLARNPHVKDVRGLGLIIGIEFDVSATPVVDACRDSGLLVLTAGKGNVVRLVPP 424 (451)
Q Consensus 358 al~~~~~~~~~~~-------------~~~~~~~~~~v~g~G~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~iri~~~ 424 (451)
+|+.+-.+++.+. .++..+......+....+.|.. .. .....+|..+.+.+ +.+++.+.
T Consensus 351 ~L~~~G~~G~~~~i~~~~~~A~~l~~~l~~~g~~~~~~p~s~~V~f~~--p~----~~~~~~gW~L~~~~--~~~Hivvm 422 (470)
T PLN02263 351 TLNRKGYRGFQKEVQKCLRNAHYLKDRLREAGISAMLNELSSTVVFER--PK----DEEFVRRWQLACQG--NIAHVVVM 422 (470)
T ss_pred HHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeCCCceEEEEec--Cc----hHHhhcceEEccCC--CcEEEEEc
Confidence 6776555555444 1122222222233334433332 21 12245787776543 45777766
Q ss_pred CCCCHHHHHHHHHHHHHHHHH
Q 013008 425 LIISEQELDQAVEILCKTLPV 445 (451)
Q Consensus 425 ~~~t~e~i~~~l~~l~~~l~~ 445 (451)
..++++.+|++++.|.+..+.
T Consensus 423 phv~~~~id~fi~DL~~~~~~ 443 (470)
T PLN02263 423 PSVTIEKLDYFLKELVEKRST 443 (470)
T ss_pred CCCCHHHHHHHHHHHHHHHhh
Confidence 667899999999999987764
No 347
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.25 E-value=6.4e-10 Score=110.12 Aligned_cols=294 Identities=9% Similarity=-0.018 Sum_probs=173.5
Q ss_pred CCHHHHHHHHHHHhhccc---c-cCC--CCC---HHHHHHHHHHhhccCC-C--eE-EecCCHHHHHHHHHHHHHHHhhh
Q 013008 115 GDADWIKAVVDQANVLTH---V-SNM--YYS---IPQIELAKRLVACSFA-D--RV-FFSNTGTEANEAAIKFARKFQRH 181 (451)
Q Consensus 115 ~~p~v~~a~~~~~~~~~~---~-~~~--~~~---~~~~~l~~~l~~~~~~-e--~v-~~~~sG~eA~~~al~~a~~~~~~ 181 (451)
.+++|++|+.+.+.++.. + ... ... +...+..+.|+++++. + ++ ++..||+.|+++++..+..
T Consensus 14 ~p~~V~~a~~~~~~~~~~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgt~~~Ea~~~nl~~---- 89 (360)
T PRK05355 14 LPEEVLEQAQQELLDWNGSGMSVMEISHRSKEFEAVAEEAEADLRELLNIPDNYKVLFLQGGASLQFAMVPMNLLG---- 89 (360)
T ss_pred CCHHHHHHHHHHhhccccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEEcCCchHHHHHHHHhcCC----
Confidence 578999999988744210 0 000 111 3366777888888872 2 35 4558899999999886552
Q ss_pred cCCCCCCCCceEEEEcCCccCChhhhhhcc-CCCCcCCCCcCCCCCeeEeeCCCHHHHHH-hcCCCCeEEEEEccccCCC
Q 013008 182 SNPDSKEPATEFVSFTNSFHGRTMGALALT-SKEHYRSPFEPVMPGVNFVEYGNIEATRK-LIQPGKTAAVFVEPIQGEG 259 (451)
Q Consensus 182 ~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~~le~-~l~~~~~aavi~ep~~~~~ 259 (451)
+++++++...+..|....-+.-. +..... ...++. ...+..++++ .+++ ++.+|.+.-+-.++
T Consensus 90 -------~g~~~l~i~~G~fg~r~~~~a~~~g~~~~~----~~~~~~---g~~~~~~~~~~~l~~-~~~~V~~th~eTst 154 (360)
T PRK05355 90 -------GGKKADYVDTGSWSKKAIKEAKKYGEVNVA----ASSEDD---GFTYIPPLDEWQLSD-DAAYVHYTSNETID 154 (360)
T ss_pred -------CCCeEEEEECCHHHHHHHHHHHHhCCceEE----eccccc---CCCCCCChhhccCCC-CCCEEEEccCCCcc
Confidence 46777777777666654322211 211100 000000 0012233334 5554 56777776666667
Q ss_pred CccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccccccCCCcceeeec--ccccCCcccccccccHHHHhhcc
Q 013008 260 GIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLA--KPLAGGLPIGAALVTEKVASAIN 337 (451)
Q Consensus 260 G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~t~s--K~lg~G~~iG~v~~~~~i~~~~~ 337 (451)
|.+.++ +++| ||+++|+|-+++ +| +...-.+.+ |++++| |.+| -..+|++.+++++.+.+.
T Consensus 155 Gv~~~~---i~~i------~g~l~vVDavss-~g--~~~idv~~~----d~~~~ssqK~lg-P~Glg~l~~s~~~l~~~~ 217 (360)
T PRK05355 155 GTEFHE---LPDT------GDVPLVADMSSD-IL--SRPIDVSKF----GLIYAGAQKNIG-PAGLTIVIVREDLLGRAL 217 (360)
T ss_pred eEecCc---cccc------CCCcEEEEcCcc-cc--CccCCHHHc----cEEEEecccccc-CCceEEEEECHHHHhhcc
Confidence 766432 5544 899999999986 43 222222322 466665 9885 234788889999887765
Q ss_pred CC-C----------ccCC-CCCcHHHHHHHHHHHHHhcCh-HHH---HH----------HHhCCCCccee-c---cccee
Q 013008 338 YG-D----------HGST-FAGSPLVCNAAIAVLDKISNP-AFL---AS----------KLARNPHVKDV-R---GLGLI 387 (451)
Q Consensus 338 ~~-~----------~~~t-~~~~~~~~aaa~aal~~~~~~-~~~---~~----------~~~~~~~~~~v-~---g~G~~ 387 (451)
+. . ...+ ++.|.....+..++|+.+.++ ++. ++ .++.++....+ . .....
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~rs~~v 297 (360)
T PRK05355 218 PSIPSMLDYKTHADNDSMYNTPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAALLYDAIDSSDFYRNPVAPEDRSRMN 297 (360)
T ss_pred cCCChHHHHHHHHhcCCccCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCChhhcCCcE
Confidence 51 1 1112 334556667777888887655 332 22 23344422111 1 11244
Q ss_pred EEEEecC--ChHHHHHHHHHCCceeeecCC-CCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q 013008 388 IGIEFDV--SATPVVDACRDSGLLVLTAGK-GNVVRLVPPLIISEQELDQAVEILCKTLP 444 (451)
Q Consensus 388 ~~~~~~~--~~~~~~~~l~~~Gv~~~~~~~-~~~iri~~~~~~t~e~i~~~l~~l~~~l~ 444 (451)
..|.++. ...++.+.+.++|+.+.++.. .+.+|+++....|.|||+++++.|+++++
T Consensus 298 ~sf~~~~~~~~~~~~~~~~~~Gi~~~~~~~~~g~vRiS~~~~nt~eei~~l~~~l~~~~~ 357 (360)
T PRK05355 298 VPFTLADEELDKKFLAEAKAAGLVGLKGHRSVGGMRASIYNAMPLEGVQALVDFMKEFER 357 (360)
T ss_pred EEEEcCChHHHHHHHHHHHHCCCcccCCCCccCcEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 5555432 224566788889999854432 36799999999999999999999999775
No 348
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.21 E-value=2.5e-09 Score=102.06 Aligned_cols=289 Identities=13% Similarity=0.090 Sum_probs=151.1
Q ss_pred HHHHHHHHHHhhccC--CCeEEecCCHH-HHHHHHHHHHHHHhhhcCCCC--CCCCceEEEEcCCccCChhhhhhccCCC
Q 013008 140 IPQIELAKRLVACSF--ADRVFFSNTGT-EANEAAIKFARKFQRHSNPDS--KEPATEFVSFTNSFHGRTMGALALTSKE 214 (451)
Q Consensus 140 ~~~~~l~~~l~~~~~--~e~v~~~~sG~-eA~~~al~~a~~~~~~~~~~~--~~~~~~ii~~~~~yhg~~~~~~~~~~~~ 214 (451)
....++.+..++.++ .++|+...+.+ +-+.-++.-+..+....+.++ ..++-++|.+.|+|-.+.......+
T Consensus 69 ~Gipe~r~l~a~llgv~~~~viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGYDRHFai~E~~G--- 145 (425)
T PF12897_consen 69 DGIPEARELFAELLGVPPENVIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGYDRHFAITEHFG--- 145 (425)
T ss_dssp S--HHHHHHHHHHHTS-GGGEEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--HHHHHHHHHCT---
T ss_pred CChHHHHHHHHHHhCCCHHHEEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCchHHHHHHHhhC---
Confidence 334566666667766 66666654433 333333333332221111111 1356789999999976643322221
Q ss_pred CcCCCCcCCCCCeeEeeC----CCHHHHHHhcC-CCCeEEEEEccccCCCCccccCHHHHHHHHHH-HHHhCCEEEEecc
Q 013008 215 HYRSPFEPVMPGVNFVEY----GNIEATRKLIQ-PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDA-CDDAGALLVFDEV 288 (451)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~----~d~~~le~~l~-~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l-~~~~g~llI~DEv 288 (451)
-....+|. +|++.+|+++. +..++.++|-|.++|+.++.++.+-.++|+.+ +...|..++.|.+
T Consensus 146 ----------iemi~VpM~~dGPDmD~Ve~LV~~D~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~WDNA 215 (425)
T PF12897_consen 146 ----------IEMIPVPMTEDGPDMDMVEELVAEDPSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIFWDNA 215 (425)
T ss_dssp -----------EEEEEEEETTEE-HHHHHHHTHTSTTEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT-EEEEE-T
T ss_pred ----------cEEEecCCCCCCCCHHHHHHHHhcCCccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEEEeecC
Confidence 12223333 28999999995 66899999999988887789999999999998 4568999999999
Q ss_pred ccCCCcccc--cc-------cccccCCCcce----eeecccccCCcccccccccHHHHhhccCCCccCCCCCcHHHHHHH
Q 013008 289 QCGLGRTGY--LW-------AHEHYGIFPDI----MTLAKPLAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAA 355 (451)
Q Consensus 289 ~tg~gr~G~--~~-------~~~~~~~~pdi----~t~sK~lg~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~aaa 355 (451)
|+=.-.++. .- .....| .||. .+.||---.|-.++++.++++-++.+.......|.+.+-+.|..-
T Consensus 216 Y~vHhL~~~~~~~~~~nil~~~~~AG-npdrv~~F~STSKITf~GaGva~~aaS~~Nl~~~~~~~~~~tIgpdKvNQLRH 294 (425)
T PF12897_consen 216 YAVHHLYDEEPRDALLNILDACAKAG-NPDRVYVFASTSKITFPGAGVAFFAASEANLAWIKKHLSVQTIGPDKVNQLRH 294 (425)
T ss_dssp TTT-BSSSSSS------HHHHHHHTT--TTSEEEEEESTTTS-TTSS-EEEEE-HHHHHHHHHHHHHH-S---HHHHHHH
T ss_pred ceEeeccccccchhhhHHHHHHHHcC-CCCeEEEEecccccccCCcceeeeecCHHHHHHHHHHhcCceeCccHHHHHHH
Confidence 863211111 00 011112 4553 467897656778999999988777765433344555566665554
Q ss_pred HHHHHHhcChHHHHH------------------HHhCC----CCcceeccc-ceeEEEEe-cCChHHHHHHHHHCCceee
Q 013008 356 IAVLDKISNPAFLAS------------------KLARN----PHVKDVRGL-GLIIGIEF-DVSATPVVDACRDSGLLVL 411 (451)
Q Consensus 356 ~aal~~~~~~~~~~~------------------~~~~~----~~~~~v~g~-G~~~~~~~-~~~~~~~~~~l~~~Gv~~~ 411 (451)
..-+.-.+ .++.++ +.+++ ....+..+. |.|++++. +.-+.++++.+.+.||.+.
T Consensus 295 vrff~d~~-gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~~ia~Wt~P~GGYFIsld~~~G~AkrvV~lakeAGV~LT 373 (425)
T PF12897_consen 295 VRFFKDAE-GGVRAHMRKHAAILRPKFEAVLEILEEELGDGLGIASWTKPKGGYFISLDVLDGTAKRVVELAKEAGVALT 373 (425)
T ss_dssp HHHHHSHH-THHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGGTSEEE---SBSS-EEEEESTT-HHHHHHHHHHTTEE--
T ss_pred HHHhcChh-hHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCCCeeEecCCCCceEEEEecCCChHHHHHHHHHHhCceeC
Confidence 44333211 022222 22222 233444443 66777776 5568899999999999999
Q ss_pred ecCC---------CCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q 013008 412 TAGK---------GNVVRLVPPLIISEQELDQAVEILCKTLP 444 (451)
Q Consensus 412 ~~~~---------~~~iri~~~~~~t~e~i~~~l~~l~~~l~ 444 (451)
|.|. ...||+.|++- +.||++.+++.+.-+++
T Consensus 374 ~AGAtfPyg~DP~D~nIRiAPS~P-~leel~~Am~~~~~cv~ 414 (425)
T PF12897_consen 374 PAGATFPYGKDPRDSNIRIAPSYP-SLEELETAMDVFATCVK 414 (425)
T ss_dssp -TTTTSGGG--TTS-EEEE--SSS--HHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCcEEecCCCC-CHHHHHHHHHHHHHHHH
Confidence 8541 25799999876 88999999999887764
No 349
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.20 E-value=1.9e-09 Score=106.86 Aligned_cols=290 Identities=11% Similarity=0.009 Sum_probs=160.9
Q ss_pred CCHHHHHHHHHHHhhcccccC----CCC--C---HHHHHHHHHHhhccC---CCeEEecCC-HHHHHHHHHHHHHHHhhh
Q 013008 115 GDADWIKAVVDQANVLTHVSN----MYY--S---IPQIELAKRLVACSF---ADRVFFSNT-GTEANEAAIKFARKFQRH 181 (451)
Q Consensus 115 ~~p~v~~a~~~~~~~~~~~~~----~~~--~---~~~~~l~~~l~~~~~---~e~v~~~~s-G~eA~~~al~~a~~~~~~ 181 (451)
.++.|++|+.+.+..+..... ..+ . ....+..+.++++++ .+.|+|+++ ||+|++.++..+... .
T Consensus 10 ~p~~V~~a~~~~~~~~~~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~~~~~~vvf~~gs~T~a~~~~~~~l~~~-~- 87 (355)
T cd00611 10 LPEEVLEQAQKELLDFNGLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIPDNYKVLFLQGGATGQFAAVPLNLLGD-K- 87 (355)
T ss_pred CCHHHHHHHHHHHhhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCCC-C-
Confidence 578999999998755321100 111 1 236677888888887 346888866 999999999865310 0
Q ss_pred cCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEee------CCC-HHHHHHhcCCCCeEEEEEcc
Q 013008 182 SNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVE------YGN-IEATRKLIQPGKTAAVFVEP 254 (451)
Q Consensus 182 ~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~d-~~~le~~l~~~~~aavi~ep 254 (451)
++++.| +..+-.|.+...+... +. .+..++ +.+ .+..+..+. .++++|.+..
T Consensus 88 ------~~~~~i-~~g~~~~~~~~~a~~~-g~------------~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~lV~~~h 146 (355)
T cd00611 88 ------GTADYV-VTGAWSAKAAKEAKRY-GG------------VVVIVAAKEEGKYTKIPDVETWDLA-PDAAYVHYCS 146 (355)
T ss_pred ------CeEEEE-ECCHHHHHHHHHHHhc-CC------------CcEEEecccccCCCCCCCHhhcCCC-CCCCEEEEeC
Confidence 123333 3222222111011111 11 111121 112 222223333 4567776666
Q ss_pred ccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccccccCCCcceeeecccccCCcccccccccHHHHh
Q 013008 255 IQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVAS 334 (451)
Q Consensus 255 ~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~t~sK~lg~G~~iG~v~~~~~i~~ 334 (451)
+-+.+|...+ ++++.||+++++|-+++ +| +...-.+.++ .++.+--|.+| -..+|++++++++.+
T Consensus 147 ~~t~tG~~~~---------~i~~~~g~~~~VDa~qs-~g--~~~idv~~~~--~~~ss~~K~lG-P~G~g~l~~~~~~~~ 211 (355)
T cd00611 147 NETIHGVEFD---------EVPDTGGVPLVADMSSN-IL--SRPIDVSKFG--VIYAGAQKNLG-PAGVTVVIVRKDLLG 211 (355)
T ss_pred CcccccEEcc---------eecccCCCeEEEEcccc-cc--CCCCCHHHhC--EEEeecccccC-CCceEEEEECHHHHh
Confidence 6555666422 45667999999999997 43 2222333333 23333448775 245788889998887
Q ss_pred hccCCC-----------ccCCC-CCcHHHHHHHHHHHHHhcCh-HHHH---H----------HHhCCCCcc-ee---ccc
Q 013008 335 AINYGD-----------HGSTF-AGSPLVCNAAIAVLDKISNP-AFLA---S----------KLARNPHVK-DV---RGL 384 (451)
Q Consensus 335 ~~~~~~-----------~~~t~-~~~~~~~aaa~aal~~~~~~-~~~~---~----------~~~~~~~~~-~v---~g~ 384 (451)
.+.+.. ...++ +.|.....+..++|+.+.+. ++.. + .++.+|.+. .. ...
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l~~~l~~~l~~~~gl~~~~~~~~~r 291 (355)
T cd00611 212 KARKITPSMLNYKTHADNNSLYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDNSNGFYRGPVDKRAR 291 (355)
T ss_pred hcccCCCCcccHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCccccccCCCHHHc
Confidence 654320 01112 33555677777888887554 3321 1 223443221 11 112
Q ss_pred -ceeEEEEecCC--hHHHHHHHHHCCceeeecCC-CCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 013008 385 -GLIIGIEFDVS--ATPVVDACRDSGLLVLTAGK-GNVVRLVPPLIISEQELDQAVEILCKT 442 (451)
Q Consensus 385 -G~~~~~~~~~~--~~~~~~~l~~~Gv~~~~~~~-~~~iri~~~~~~t~e~i~~~l~~l~~~ 442 (451)
+..+.|.++.. ..++...+.++|+...++.. .+.+|+++...+|+|||+++++.|+++
T Consensus 292 s~~vvsf~~~~~~l~~~~~~~~~r~G~~~~~~~~~~g~vR~S~~~~nt~edi~~l~~al~~~ 353 (355)
T cd00611 292 SRMNVPFRLGKEELEKEFLKEAEAAGMIGLKGHRSVGGIRASIYNALSLEGVQALADFMKEF 353 (355)
T ss_pred CceEEEEEcCChhhhHHHHHHHHHCCCcccCCCcccCeEEEEccCCCCHHHHHHHHHHHHHH
Confidence 23455555321 24455677789997444422 367999999999999999999999874
No 350
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.18 E-value=5.1e-09 Score=107.85 Aligned_cols=186 Identities=18% Similarity=0.111 Sum_probs=111.7
Q ss_pred CHHHHHHHHHHhhccC-C--------------CeEEecCCHHHHHHHHHHHHHHHhhhcC-C---C---C-------CCC
Q 013008 139 SIPQIELAKRLVACSF-A--------------DRVFFSNTGTEANEAAIKFARKFQRHSN-P---D---S-------KEP 189 (451)
Q Consensus 139 ~~~~~~l~~~l~~~~~-~--------------e~v~~~~sG~eA~~~al~~a~~~~~~~~-~---~---~-------~~~ 189 (451)
+..+.++.++|++.++ . ..-.|++|||+||..|+.+||....... . . + ...
T Consensus 128 t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~~~~~~~ 207 (522)
T TIGR03799 128 TPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFAALKHYGY 207 (522)
T ss_pred HHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhccccccccccccccchhhhhhccC
Confidence 3446666777776652 1 2367899999999999999996532110 0 0 0 001
Q ss_pred CceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCC-----CHHHHHHhcC----CC-CeEEEEEccccCCC
Q 013008 190 ATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYG-----NIEATRKLIQ----PG-KTAAVFVEPIQGEG 259 (451)
Q Consensus 190 ~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~le~~l~----~~-~~aavi~ep~~~~~ 259 (451)
+..+|+.+..-|.+..-+....+... ..+..+|.+ |+++|+++|+ .+ .+.+|+........
T Consensus 208 ~~~~v~~S~~~H~S~~kaa~~lglg~---------~~v~~vp~d~~g~~d~~~L~~~i~~~~~~g~~~~~vvataGtt~t 278 (522)
T TIGR03799 208 DGLAILVSERGHYSLGKAADVLGIGR---------DNLIAIKTDANNRIDVDALRDKCAELAEQNIKPLAIVGVAGTTET 278 (522)
T ss_pred CceEEEECCCchHHHHHHHHHcCCCc---------ccEEEEEeCCCCcCCHHHHHHHHHHHHHCCCCcEEEEEEecCcCC
Confidence 23356666666766654443332210 122233322 7899999885 22 23334433334457
Q ss_pred CccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccccccCC-Ccceeeec--ccccCCccccccccc-HHHHhh
Q 013008 260 GIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGI-FPDIMTLA--KPLAGGLPIGAALVT-EKVASA 335 (451)
Q Consensus 260 G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~-~pdi~t~s--K~lg~G~~iG~v~~~-~~i~~~ 335 (451)
|.+-| +++|.++|++||+++++|-+|.|....-..+.....++ ..|.++++ |.+.+.+.+|+++.+ +++.+.
T Consensus 279 GaiDp----l~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~~l~gle~aDSit~d~HK~l~~P~g~G~llvr~~~~~~~ 354 (522)
T TIGR03799 279 GNIDP----LDEMADIAQELGCHFHVDAAWGGATLLSNTYRHLLKGIERADSVTIDAHKQLYVPMGAGMVLFKDPALMSA 354 (522)
T ss_pred CCcCC----HHHHHHHHHHcCCeEEEEchhhhHHHhCHHHHHHhcCchhCCEEEEChhhcCCcCcccEEEEEeCHHHHHH
Confidence 87777 99999999999999999999975321111011112354 67999887 877666788888775 455554
Q ss_pred cc
Q 013008 336 IN 337 (451)
Q Consensus 336 ~~ 337 (451)
+.
T Consensus 355 ~~ 356 (522)
T TIGR03799 355 IE 356 (522)
T ss_pred hc
Confidence 43
No 351
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.17 E-value=1.5e-08 Score=99.88 Aligned_cols=323 Identities=15% Similarity=0.098 Sum_probs=179.6
Q ss_pred CEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHhhccCCCeEEecCCHHHHHHHHHHHHHH
Q 013008 98 REYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARK 177 (451)
Q Consensus 98 ~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~e~v~~~~sG~eA~~~al~~a~~ 177 (451)
.-|||+.|-.++ +-..++..+||.. +.- .+..++...+|++..++++|.+.++++.+|..|...++++..+
T Consensus 41 dV~IDLrSDTgT---~apS~~m~aAM~~----GDD--~Y~gdpSv~~Lee~vael~G~E~alpthqGRgaE~Il~~~~~~ 111 (467)
T TIGR02617 41 DVFIDLLTDSGT---GAVTQSMQAAMMR----GDE--AYSGSRSYYALAESVKNIFGYQYTIPTHQGRGAEQIYIPVLIK 111 (467)
T ss_pred CeEEECccCCCC---CCCCHHHHHHHHc----CCc--ccccCchHHHHHHHHHHHhCCceEEECCCCchHHHHHHHhhcc
Confidence 468999987663 2244667777664 111 1233445789999999999999999999999999999986652
Q ss_pred HhhhcCCCCCCCCceEEE------EcCCccCCh-hhhhhccCCCCcCCC-CcCCCCCeeEeeC---CCHHHHHHhcCC--
Q 013008 178 FQRHSNPDSKEPATEFVS------FTNSFHGRT-MGALALTSKEHYRSP-FEPVMPGVNFVEY---GNIEATRKLIQP-- 244 (451)
Q Consensus 178 ~~~~~~~~~~~~~~~ii~------~~~~yhg~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~---~d~~~le~~l~~-- 244 (451)
. +++.+++ +...||-.+ -+...++|....... -....+.. ..++ -|++.|++.|++
T Consensus 112 ~----------~g~e~g~~~~~~~v~hn~~fett~g~a~l~G~~~~~l~~~ea~~~~~-~~~fkG~~dl~~le~~I~~~g 180 (467)
T TIGR02617 112 K----------REQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTARNVYTKEAFDTGV-RYDFKGNFDLEGLERGIEEVG 180 (467)
T ss_pred c----------ccccccccccccccceEEEEecchHHHHHcCceeecccchhhccccc-CCCCCCCcCHHHHHHHHhhcC
Confidence 1 2333331 112222222 122233332110000 00000000 0011 189999999983
Q ss_pred -CCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEecccc----CC------Ccccccc---cccccCCCcce
Q 013008 245 -GKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQC----GL------GRTGYLW---AHEHYGIFPDI 310 (451)
Q Consensus 245 -~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t----g~------gr~G~~~---~~~~~~~~pdi 310 (451)
+++..+.+.-.++..|+.+.+.+.+++++++|++||+.++.|-+-- -| +..|... +.+.+ -..|.
T Consensus 181 ~~~i~~v~~tlt~N~~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~-~~aDs 259 (467)
T TIGR02617 181 PNNVPYIVATITCNSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETY-KYADM 259 (467)
T ss_pred CCCceeeeeeEEEecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhh-ccCCE
Confidence 4566666665566667778999999999999999999999997531 01 2222210 10111 13565
Q ss_pred e--eecccccCCccccccc-cc-H---HHHhhccCC----CccCCCCCc-HHHHHHHHHHHHHhcChHHHHH--------
Q 013008 311 M--TLAKPLAGGLPIGAAL-VT-E---KVASAINYG----DHGSTFAGS-PLVCNAAIAVLDKISNPAFLAS-------- 370 (451)
Q Consensus 311 ~--t~sK~lg~G~~iG~v~-~~-~---~i~~~~~~~----~~~~t~~~~-~~~~aaa~aal~~~~~~~~~~~-------- 370 (451)
+ |+||.++ .|+|.++ ++ + ++.+..+.. ...-||+|= .--+.|....|+...++++++.
T Consensus 260 vt~slsKglg--ApvGg~Lag~d~~~~~l~~~~~~~~i~~EGf~tYGGlagrd~ea~a~Gl~e~~~~~yl~~ri~qv~yl 337 (467)
T TIGR02617 260 LAMSAKKDAM--VPMGGLLCFKDDSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGMNLDWLAYRINQVQYL 337 (467)
T ss_pred EEEEcCCCCC--CcccceEEecchhHHHHHHHHHhhcccccCCcCcCchhHHHHHHHHhhhhhcccHHHHHHHHHHHHHH
Confidence 5 5677774 5766554 44 4 344443321 233466542 2223333334554445555544
Q ss_pred ---HH-hCCCCcceecccceeEEEEe----------cCChHHHHHHHH-HCCceeee-------c----CC-----CCEE
Q 013008 371 ---KL-ARNPHVKDVRGLGLIIGIEF----------DVSATPVVDACR-DSGLLVLT-------A----GK-----GNVV 419 (451)
Q Consensus 371 ---~~-~~~~~~~~v~g~G~~~~~~~----------~~~~~~~~~~l~-~~Gv~~~~-------~----~~-----~~~i 419 (451)
+. ..+|.+. + .|.-+.++- +-.+..++.+|. +-||-..- . +. -..+
T Consensus 338 ~~~L~~~Gvpi~~-~--Gghav~iDa~~~lphip~~~fpa~al~~~ly~~~GiR~~e~G~~~~~rd~~~~~~~~~~~el~ 414 (467)
T TIGR02617 338 VNGLEEIGVVCQQ-A--GGHAAFVDAGKLLPHIPADQFPAHALACELYKVAGIRAVEIGSLLLGRDPKTGKQLPCPAELL 414 (467)
T ss_pred HHHHHhCCCcEEe-c--CccEEEEehhhhCCCCChhhCcHHHHHHHHHHHcCcceEeecceecccCCCCCccCCCcccee
Confidence 22 2355443 2 233333332 134667777776 34543221 0 11 1457
Q ss_pred EEeCCC-CCCHHHHHHHHHHHHHHHHHH
Q 013008 420 RLVPPL-IISEQELDQAVEILCKTLPVL 446 (451)
Q Consensus 420 ri~~~~-~~t~e~i~~~l~~l~~~l~~~ 446 (451)
|+.+|- +-|.+++|..++++..+.++-
T Consensus 415 RlaipRrvyt~~h~d~v~~~~~~~~~~~ 442 (467)
T TIGR02617 415 RLTIPRATYTQTHMDFIIEAFKHVKENA 442 (467)
T ss_pred eeccccccccHhHHHHHHHHHHHHHhhh
Confidence 887664 569999999999999877653
No 352
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=99.09 E-value=3.7e-08 Score=93.54 Aligned_cols=168 Identities=15% Similarity=0.148 Sum_probs=113.5
Q ss_pred HHHHHHHHhhccC----CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcC
Q 013008 142 QIELAKRLVACSF----ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYR 217 (451)
Q Consensus 142 ~~~l~~~l~~~~~----~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~ 217 (451)
+..+|+.|.++=| ++.|++|.|.+.|+...++++.+- +++.|+++-|-|.-++.....+++...
T Consensus 119 R~~VA~~I~rRDG~p~~p~dI~LT~GAS~ai~~il~l~~~~----------~~~GvliPiPQYPLYsAti~l~~~~~v-- 186 (475)
T KOG0258|consen 119 RKHVAEFIERRDGIPADPEDIFLTTGASPAIRSILSLLIAG----------KKTGVLIPIPQYPLYSATISLLGGTQV-- 186 (475)
T ss_pred HHHHHHHHHhccCCCCCHHHeeecCCCcHHHHHHHHHHhcC----------CCCceEeecCCCchhHHHHHHhCCccc--
Confidence 7788888887755 679999999999999999988742 578899999999766533222222111
Q ss_pred CCCcCCCCCeeEeeCCCHHHHHHhcC----C-CCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccC-
Q 013008 218 SPFEPVMPGVNFVEYGNIEATRKLIQ----P-GKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCG- 291 (451)
Q Consensus 218 ~~~~~~~~~~~~~~~~d~~~le~~l~----~-~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg- 291 (451)
+|.-.....+. -|.++|++.++ . +-.++|+++|-|++| .+.+++-+++|...|.+++++|+.||||..
T Consensus 187 -~YyLdEe~~W~---ld~~el~~~~~eA~k~i~~r~lvvINPGNPTG--qvls~e~ie~i~~fa~~~~l~llaDEVYQ~N 260 (475)
T KOG0258|consen 187 -PYYLDEESNWS---LDVAELERSVDEARKGINPRALVVINPGNPTG--QVLSEENIEGIICFAAEEGLVLLADEVYQDN 260 (475)
T ss_pred -ceeeccccCCC---CCHHHHHHHHHHHhccCCceEEEEECCCCccc--hhhcHHHHHHHHHHHHHcCeEEechHHHHhh
Confidence 11100111111 16788877775 1 235678888877765 567999999999999999999999999876
Q ss_pred CCccc-cccccc----ccC-CCcc---ee---eecccccC--Cccccccc
Q 013008 292 LGRTG-YLWAHE----HYG-IFPD---IM---TLAKPLAG--GLPIGAAL 327 (451)
Q Consensus 292 ~gr~G-~~~~~~----~~~-~~pd---i~---t~sK~lg~--G~~iG~v~ 327 (451)
....+ +++++. +.| -.+| +. +.||++.| |.+.|++=
T Consensus 261 vy~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmE 310 (475)
T KOG0258|consen 261 VYTTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYME 310 (475)
T ss_pred ccCCCcchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCeee
Confidence 32334 333332 122 2343 22 45898875 88889863
No 353
>PLN02271 serine hydroxymethyltransferase
Probab=99.02 E-value=1.1e-07 Score=96.69 Aligned_cols=260 Identities=14% Similarity=0.096 Sum_probs=142.2
Q ss_pred EEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhc-cCCCCcCCCCcCCCCCeeEee--CC-
Q 013008 158 VFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALAL-TSKEHYRSPFEPVMPGVNFVE--YG- 233 (451)
Q Consensus 158 v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~- 233 (451)
|... ||+.||.+++..+. .|+|+|+..+..+-|+....... .+...-. ..-.+..++ .+
T Consensus 218 VQp~-SGs~AN~aV~~ALl-----------~PGD~IL~ldl~~GGHlshg~~~~~g~~vs~-----sG~~~~~vpY~~d~ 280 (586)
T PLN02271 218 VQPY-SCTSANFAVYTGLL-----------LPGDRIMGLDSPSGGHMSHGYYTPGGKKVSG-----ASIFFESLPYKVNP 280 (586)
T ss_pred eeec-cHHHHHHHHHHHhc-----------CCCCEEEEecCCCCCchhccccccccccccc-----ccceEEEEEccccc
Confidence 4444 89999999998665 27999999988776664332111 0000000 000112222 11
Q ss_pred -----CHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccccccCCCc
Q 013008 234 -----NIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFP 308 (451)
Q Consensus 234 -----d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~p 308 (451)
|.+++++.....++++|++...... ...+ +++++++|+++|++|++|-+|. .|-........-+ ...
T Consensus 281 ~~g~IDyd~lek~a~~~rPKLII~g~Sayp--r~~D----~~~i~eIAdevGA~LmvD~AH~-aGLIa~g~~~sP~-~~a 352 (586)
T PLN02271 281 QTGYIDYDKLEEKALDFRPKILICGGSSYP--REWD----YARFRQIADKCGAVLMCDMAHI-SGLVAAKECVNPF-DYC 352 (586)
T ss_pred ccCccCHHHHHHHhhhcCCeEEEECchhcc--CcCC----HHHHHHHHHHcCCEEEEECccc-ccccccCcCCCCC-cCC
Confidence 7899998665567889998664332 1334 8999999999999999999995 3222111000111 136
Q ss_pred ceeeec--ccccCCcccccccccHH--------------------HHhhccCCCccCCCCCcHHH-HHHHHHHHHHhcCh
Q 013008 309 DIMTLA--KPLAGGLPIGAALVTEK--------------------VASAINYGDHGSTFAGSPLV-CNAAIAVLDKISNP 365 (451)
Q Consensus 309 di~t~s--K~lg~G~~iG~v~~~~~--------------------i~~~~~~~~~~~t~~~~~~~-~aaa~aal~~~~~~ 365 (451)
|+++.+ |+|.|- +.|.++.+++ +.+.+....+.+..+++... .++...+++....+
T Consensus 353 Dvvt~TTHKtLrGP-rGG~I~~r~~~~~~~~g~~gs~s~~~~~~d~~~kI~~aVfPglqgGphn~~IAalAvalkea~~~ 431 (586)
T PLN02271 353 DIVTSTTHKSLRGP-RGGIIFYRKGPKLRKQGMLLSHGDDNSHYDFEEKINFAVFPSLQGGPHNNHIAALAIALKQVATP 431 (586)
T ss_pred cEEEeCCcccCCCC-CceEEEecccccccccCCccccccccccHHHHHHhhcccCCccccChhHHHHHHHHHHHHHHhCh
Confidence 887665 888652 3366666643 33333322222222222222 33333445544444
Q ss_pred HH---HHH-------HH-----hCCCCcceecccceeEEEEec---CChHHHHHHHHHCCceeee----cC----CCCEE
Q 013008 366 AF---LAS-------KL-----ARNPHVKDVRGLGLIIGIEFD---VSATPVVDACRDSGLLVLT----AG----KGNVV 419 (451)
Q Consensus 366 ~~---~~~-------~~-----~~~~~~~~v~g~G~~~~~~~~---~~~~~~~~~l~~~Gv~~~~----~~----~~~~i 419 (451)
++ .++ ++ ..++.+..-. ...++++++. .......+.|-+.||.+.. +. .+..+
T Consensus 432 efk~Ya~QVv~NAkaLA~~L~~~G~~vv~ggT-dnHlvLvDl~~~g~~G~~ae~~Le~~~I~~Nkn~iP~d~~~~~psGi 510 (586)
T PLN02271 432 EYKAYMQQVKKNAQALASALLRRKCRLVTGGT-DNHLLLWDLTTLGLTGKNYEKVCEMCHITLNKTAIFGDNGTISPGGV 510 (586)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCeEeeCCC-CcceeeecCcccCCCHHHHHHHHHHcCeEeccccCCCCCCCCCCCcc
Confidence 33 222 21 2222222111 2345666663 2355566666667887642 21 12347
Q ss_pred EEeCC----CCCCHHHHHHHHHHHHHHHH
Q 013008 420 RLVPP----LIISEQELDQAVEILCKTLP 444 (451)
Q Consensus 420 ri~~~----~~~t~e~i~~~l~~l~~~l~ 444 (451)
||-.+ ....++|++++.+.|.++++
T Consensus 511 RiGT~alT~rG~~e~d~~~iA~~i~~~~~ 539 (586)
T PLN02271 511 RIGTPAMTSRGCLESDFETIADFLLRAAQ 539 (586)
T ss_pred cccCHHHHhcCCCcHHHHHHHHHHHHHHh
Confidence 87544 34567999999998888876
No 354
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=98.97 E-value=2e-07 Score=89.33 Aligned_cols=306 Identities=18% Similarity=0.196 Sum_probs=171.9
Q ss_pred CCCHHHHHHHHHHHhh-cccccC---CC-CCH---HHHHHH-HHHhhccCCCeEEe-cCCHHHHHHHHHHHHHHHhhhcC
Q 013008 114 HGDADWIKAVVDQANV-LTHVSN---MY-YSI---PQIELA-KRLVACSFADRVFF-SNTGTEANEAAIKFARKFQRHSN 183 (451)
Q Consensus 114 ~~~p~v~~a~~~~~~~-~~~~~~---~~-~~~---~~~~l~-~~l~~~~~~e~v~~-~~sG~eA~~~al~~a~~~~~~~~ 183 (451)
+..|.|.+|.-..+.. +..++. +| .++ ..+.|+ ++..++++.+.+=+ -.||+.||.+++.++..
T Consensus 37 ~~S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~LFga~~anVQPhSGs~AN~av~~All~------ 110 (413)
T COG0112 37 FTSPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKLFGAEYANVQPHSGSQANQAVYLALLQ------ 110 (413)
T ss_pred cCCHHHHHHHhhhhhhccccCCCCccccCCCeeHHHHHHHHHHHHHHHhCCCccccCCCCchHHHHHHHHHHcC------
Confidence 3678899988776643 332211 11 222 233333 33445567553322 35799999999997773
Q ss_pred CCCCCCCceEEEEcCCccCChhhhh--hccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEccc-cCCCC
Q 013008 184 PDSKEPATEFVSFTNSFHGRTMGAL--ALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPI-QGEGG 260 (451)
Q Consensus 184 ~~~~~~~~~ii~~~~~yhg~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~-~~~~G 260 (451)
|+|+|+..+-..-|+..-.. ..+|.. +.....+..++...+ |.|+++++....+++.||+=-. ++-
T Consensus 111 -----pGDtimgm~l~~GGHltHg~~v~~sG~~-~~~v~Y~vd~et~~I---DyD~~~k~a~e~kPK~ii~G~SaY~r-- 179 (413)
T COG0112 111 -----PGDTIMGLDLSHGGHLTHGSPVNFSGKL-FNVVSYGVDPETGLI---DYDEVEKLAKEVKPKLIIAGGSAYSR-- 179 (413)
T ss_pred -----CCCeEecccCCCCCcccCCCCCCcccee-EEeEecccccccCcc---CHHHHHHHHHHhCCCEEEECcccccc--
Confidence 79999988766655543221 122211 111111222221111 7899999888667788877432 211
Q ss_pred ccccCHHHHHHHHHHHHHhCCEEEEeccc-cCCCcccccccccccCCCcceeeec--ccccCCccccccccc-HHHHhhc
Q 013008 261 IYSATKEFLQFLRDACDDAGALLVFDEVQ-CGLGRTGYLWAHEHYGIFPDIMTLA--KPLAGGLPIGAALVT-EKVASAI 336 (451)
Q Consensus 261 ~~~~~~~~l~~l~~l~~~~g~llI~DEv~-tg~gr~G~~~~~~~~~~~pdi~t~s--K~lg~G~~iG~v~~~-~~i~~~~ 336 (451)
..+ +++++++|++.|++|++|=+| .|+--.|.. . .-.. ..|++|-+ |+|-| -+.|.|+++ +++.+.+
T Consensus 180 -~id----~~~~reIad~VGA~L~~DmAHiaGLVA~G~~-p-~P~~-~AdvVTtTTHKTlrG-PrGG~Il~~~eel~kki 250 (413)
T COG0112 180 -PID----FKRFREIADEVGAYLMVDMAHVAGLIAGGVH-P-NPLP-HADVVTTTTHKTLRG-PRGGIILTNDEELAKKI 250 (413)
T ss_pred -ccC----HHHHHHHHHHhCceEEehHHHHHHHHhcccC-C-CCCC-ccceEeCCcccCCCC-CCceEEEeccHHHHHHh
Confidence 233 899999999999999999998 555333321 1 1111 26777654 88864 466888888 4898888
Q ss_pred cCCCccCCCCCcHHHHHHHHH-HHHHhcChH---HHHH-------HHhCCC--Ccceecc--cceeEEEEec---CChHH
Q 013008 337 NYGDHGSTFAGSPLVCNAAIA-VLDKISNPA---FLAS-------KLARNP--HVKDVRG--LGLIIGIEFD---VSATP 398 (451)
Q Consensus 337 ~~~~~~~t~~~~~~~~aaa~a-al~~~~~~~---~~~~-------~~~~~~--~~~~v~g--~G~~~~~~~~---~~~~~ 398 (451)
+..-+.+..+++-+-..||.+ ++....+++ +.++ +++.+. .+..+.| ...++.+++. ....+
T Consensus 251 n~aVFPg~qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~G~~vvsGgTdnHl~lVDl~~~~~~Gk~ 330 (413)
T COG0112 251 NSAVFPGLQGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKERGFKVVSGGTDNHLVLVDLRSKGLTGKK 330 (413)
T ss_pred hhhcCCccCCChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHcCCeEecCCccceEEEEEcccCCCCHHH
Confidence 765556666655433333332 233333333 2222 222211 2222222 1235566663 23455
Q ss_pred HHHHHHHCCceee----ecCC-----CCEEEEeCCC----CCCHHHHHHHHHHHHHHHHH
Q 013008 399 VVDACRDSGLLVL----TAGK-----GNVVRLVPPL----IISEQELDQAVEILCKTLPV 445 (451)
Q Consensus 399 ~~~~l~~~Gv~~~----~~~~-----~~~iri~~~~----~~t~e~i~~~l~~l~~~l~~ 445 (451)
....|-+.||.+. |... ..-||+-.+. ...++|++++.+.|.++++.
T Consensus 331 ae~~L~~~~It~NKN~iP~D~~~p~~tSGIRiGtpa~TtrG~~e~e~~~Ia~~I~~vl~~ 390 (413)
T COG0112 331 AEAALERAGITVNKNAIPFDPESPFVTSGIRIGTPAVTTRGFGEAEMEEIADLIADVLDG 390 (413)
T ss_pred HHHHHHHcCEeeccCCCCCCCCCCCCCccceeccHHHhhcCCCHHHHHHHHHHHHHHHhc
Confidence 5555656688765 2211 2347886553 34678999999988888865
No 355
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=98.95 E-value=3.4e-07 Score=85.32 Aligned_cols=318 Identities=18% Similarity=0.103 Sum_probs=183.1
Q ss_pred ecCCCEEEeeccCcccccCCCCCHHHHHHHHH-HHhhcccc---cC----CCCCHHHHHHHHHHhhccC--CCeEEecCC
Q 013008 94 DAEGREYLDLSSGIAVNALGHGDADWIKAVVD-QANVLTHV---SN----MYYSIPQIELAKRLVACSF--ADRVFFSNT 163 (451)
Q Consensus 94 d~~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~-~~~~~~~~---~~----~~~~~~~~~l~~~l~~~~~--~e~v~~~~s 163 (451)
+.+|--|||-. +||..++.+.+...+ +.++++.. ++ .......+.|..+|+-+.| ..+|.+++|
T Consensus 28 lp~~viyLdgn------SLGa~p~~~~a~~~q~a~deW~~~lirsw~~a~~~W~~lp~~lgdklApLiGA~~~Evvv~dt 101 (407)
T COG3844 28 LPGGVIYLDGN------SLGARPRAVTARLQQVATDEWGEGLIRSWNKAKADWFDLPERLGDKLAPLIGARAGEVVVTDT 101 (407)
T ss_pred CCCCeEEeecc------ccccCchHHHHHHHHHHHHHHHhhhhhhhcccCCchhhchhHHHHHhhhhhcCCCCceEEeCC
Confidence 45677888844 388655455554444 44444322 11 1112235567777777777 668888887
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcC
Q 013008 164 GTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQ 243 (451)
Q Consensus 164 G~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~ 243 (451)
.+--+...+-++...+ ++++||+++......-..... +..... +..-+...+ .+++++++++.
T Consensus 102 ts~nl~k~L~aalr~~---------~~r~vIv~E~~~fpTdly~a~--g~~~~~----~~~~~~~~~--~~P~~~~~~~~ 164 (407)
T COG3844 102 TSINLFKVLAAALRPQ---------EGRRVIVSEGDNFPTDLYIAE--GLADLL----GIGYDLEGV--IAPRALEEAIT 164 (407)
T ss_pred cchHHHHHHHHHhccC---------CCceEEeecCCCCCcchhhhc--chhhhh----cccccceee--eChHHHHHhhc
Confidence 6655555554444322 367788887765433221111 000000 000111111 15678888886
Q ss_pred CCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCccccccccccc--CCCcceeeecccccCC-
Q 013008 244 PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHY--GIFPDIMTLAKPLAGG- 320 (451)
Q Consensus 244 ~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~--~~~pdi~t~sK~lg~G- 320 (451)
+ +++.|++..++--+|-... +.+|.+++++||++++.|=+|+ - |. ...+.. |...-|-|-=|.|+||
T Consensus 165 d-d~AvV~L~~V~y~TGql~d----m~aiT~~AH~~galv~wDLAHs-a---Ga-vp~~Lh~~gaDfaigcsyKYLNgGP 234 (407)
T COG3844 165 D-DVAVVLLSHVNYKTGQLLD----MRAITALAHQHGALVGWDLAHS-A---GA-VPVDLHAAGADFAIGCSYKYLNGGP 234 (407)
T ss_pred c-ceEEEEeccccccccceee----HHHHHHHHHhcCceEEeehhcc-c---CC-cceeecccCCCeeeeeeceeccCCC
Confidence 4 7999999999999998877 9999999999999999999996 2 21 122222 3333344555999764
Q ss_pred -cccccccccHHHHhhccC---C-----------------CccCCC-C--CcHHHHHHHHHHHHHhcChH---HHHH---
Q 013008 321 -LPIGAALVTEKVASAINY---G-----------------DHGSTF-A--GSPLVCNAAIAVLDKISNPA---FLAS--- 370 (451)
Q Consensus 321 -~~iG~v~~~~~i~~~~~~---~-----------------~~~~t~-~--~~~~~~aaa~aal~~~~~~~---~~~~--- 370 (451)
-|.+..+.+ +..+...+ + ....-| . .+.+++++...+|++..+-+ +.++
T Consensus 235 Gapa~l~v~~-~h~e~~~~~lsgW~gha~pf~m~~~y~p~~ga~rf~~gt~~V~s~aal~~aLDifa~~~i~~lR~kSla 313 (407)
T COG3844 235 GAPAGLFVAP-RHRERSWPPLSGWWGHARPFAMEEVYAPGPGARRFLCGTQPVLSLAALEGALDIFADVDITELRKKSLA 313 (407)
T ss_pred CCceeEEecc-ccccccccccccccCCCCcchhhhccCcCccccceeeCCcchhhhHHHhhhhhhhhhcCHHHHHHhhhH
Confidence 444433333 33332211 0 001111 1 13456667777888764432 2222
Q ss_pred -------HHh-CCC--Cccee-----cccceeEEEEecCChHHHHHHHHHCCceeeecCCCCEEEEeC-CCCCCHHHHHH
Q 013008 371 -------KLA-RNP--HVKDV-----RGLGLIIGIEFDVSATPVVDACRDSGLLVLTAGKGNVVRLVP-PLIISEQELDQ 434 (451)
Q Consensus 371 -------~~~-~~~--~~~~v-----~g~G~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~iri~~-~~~~t~e~i~~ 434 (451)
+.+ +.+ ...-+ ...|.-+.+.+ ..+.++.+.|.++||+.--.. ++++||.| |+-.+-+|+=.
T Consensus 314 LTd~fieLvEa~~~~~~l~l~tPr~~~~rGsqvS~~h-p~~~~V~qaLi~rGVigD~R~-P~vlRfgftPlY~~~~DVw~ 391 (407)
T COG3844 314 LTDYFIELVEARCEYYGLTLVTPRAHEERGSQVSLYH-PHGYQVMQALIDRGVIGDFRE-PDVLRFGFTPLYVSFVDVWD 391 (407)
T ss_pred HHHHHHHHHHhccccCCcEEeccchhhhccceeeEec-CcHHHHHHHHHHcCccccccC-CCeeeecCccceechhHHHH
Confidence 111 111 11111 12344444443 357889999999999765443 48999976 67789999999
Q ss_pred HHHHHHHHHHHHh
Q 013008 435 AVEILCKTLPVLD 447 (451)
Q Consensus 435 ~l~~l~~~l~~~~ 447 (451)
+++.|.+++++..
T Consensus 392 AV~~L~evL~t~a 404 (407)
T COG3844 392 AVDALEEVLDTLA 404 (407)
T ss_pred HHHHHHHHHHhhc
Confidence 9999999998753
No 356
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=98.95 E-value=1.2e-07 Score=90.47 Aligned_cols=256 Identities=17% Similarity=0.189 Sum_probs=145.4
Q ss_pred EEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHH
Q 013008 158 VFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEA 237 (451)
Q Consensus 158 v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 237 (451)
.+=|.|||-|+..+-..+..+. ++..|.+.+|++..+.......+. .....+|. ......+ |.+.
T Consensus 97 t~Qt~GGTGAL~~~A~fl~~~~---------~~~~vwis~PtW~NH~~If~~aGl-~v~~Y~Yy--d~~~~~~---df~~ 161 (396)
T COG1448 97 TVQTLGGTGALRVAADFLARFF---------PDATVWISDPTWPNHKAIFEAAGL-EVETYPYY--DAETKGL---DFDG 161 (396)
T ss_pred heecCCcchHHHHHHHHHHHhC---------CCceEEeCCCCcHhHHHHHHhcCC-ceeeeecc--ccccccc---cHHH
Confidence 3457899999999888776554 467799999999777543333322 11111111 1111122 4444
Q ss_pred HHHhcC-CCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccccccCC------Ccce
Q 013008 238 TRKLIQ-PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGI------FPDI 310 (451)
Q Consensus 238 le~~l~-~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~------~pdi 310 (451)
+-..|+ -..-.+|++-+-.+|+.++-++.+.+++|.++.++.+.+-++|=+|-||+... -.+.+++ .+.+
T Consensus 162 mla~L~~a~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~Gl---eeDa~~lR~~a~~~~~~ 238 (396)
T COG1448 162 MLADLKTAPEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADGL---EEDAYALRLFAEVGPEL 238 (396)
T ss_pred HHHHHHhCCCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccch---HHHHHHHHHHHHhCCcE
Confidence 444443 11223455554433333356899999999999999999999999999996432 2222221 2323
Q ss_pred -e--eecccccC-Ccccccccc---cHHHHhhccCC---CccCCCCCcHHHHHHHHHHHHHhcChHHHHH----------
Q 013008 311 -M--TLAKPLAG-GLPIGAALV---TEKVASAINYG---DHGSTFAGSPLVCNAAIAVLDKISNPAFLAS---------- 370 (451)
Q Consensus 311 -~--t~sK~lg~-G~~iG~v~~---~~~i~~~~~~~---~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~---------- 370 (451)
+ ++||.+|- |-|+|++.. +++..+.+... ....+|+.+|--=++..+ .++.++++.+.
T Consensus 239 lva~S~SKnfgLYgERVGa~~vva~~~~~a~~v~sqlk~~iR~~ySnPP~~Ga~vva--~IL~~p~Lra~W~~El~~Mr~ 316 (396)
T COG1448 239 LVASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKAIIRTNYSNPPAHGAAVVA--TILNNPELRAEWEQELEEMRQ 316 (396)
T ss_pred EEEehhhhhhhhhhhccceeEEEeCCHHHHHHHHHHHHHHHHhccCCCchhhHHHHH--HHhCCHHHHHHHHHHHHHHHH
Confidence 3 68899985 788887643 45555544321 234566654432222222 23344433322
Q ss_pred ------------HHhCCC--Ccc-eecccceeEEEEecCChHHHHHHHH-HCCceeeecCCCCEEEEeCCCCCCHHHHHH
Q 013008 371 ------------KLARNP--HVK-DVRGLGLIIGIEFDVSATPVVDACR-DSGLLVLTAGKGNVVRLVPPLIISEQELDQ 434 (451)
Q Consensus 371 ------------~~~~~~--~~~-~v~g~G~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~~~~~~iri~~~~~~t~e~i~~ 434 (451)
+.+..+ ... -....|+|...- ...+-+.+|+ +.||++...| |++++ .+++..|+.
T Consensus 317 Ri~~mR~~lv~~L~~~~~~~~f~~i~~Q~GMFsy~G---ls~~QV~rLree~~IY~v~sG-----Ri~va-Gl~~~ni~~ 387 (396)
T COG1448 317 RILEMRQALVDALKALGAPRNFDFIISQRGMFSYTG---LSPEQVDRLREEFGIYLVASG-----RINVA-GLNTSNIDY 387 (396)
T ss_pred HHHHHHHHHHHHHHhhCCCcccchHhhcCceeecCC---CCHHHHHHHHHhccEEEecCC-----eeeec-cCChhhHHH
Confidence 112111 011 133456553322 2334445565 5699988664 67655 668899999
Q ss_pred HHHHHHHH
Q 013008 435 AVEILCKT 442 (451)
Q Consensus 435 ~l~~l~~~ 442 (451)
+++.|.++
T Consensus 388 va~ai~~v 395 (396)
T COG1448 388 VAKAIAAV 395 (396)
T ss_pred HHHHHHhh
Confidence 99998775
No 357
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=98.86 E-value=3.7e-07 Score=92.59 Aligned_cols=205 Identities=18% Similarity=0.099 Sum_probs=122.4
Q ss_pred CCHHHHHHHHHHHhhcccccCCC--CCHHHHHHHHHHhhccCC-C--eEEecCCHHHHHHHHHHHHHHHhhhcCC--CCC
Q 013008 115 GDADWIKAVVDQANVLTHVSNMY--YSIPQIELAKRLVACSFA-D--RVFFSNTGTEANEAAIKFARKFQRHSNP--DSK 187 (451)
Q Consensus 115 ~~p~v~~a~~~~~~~~~~~~~~~--~~~~~~~l~~~l~~~~~~-e--~v~~~~sG~eA~~~al~~a~~~~~~~~~--~~~ 187 (451)
.++...+++...+.+.......+ ......++...+++.++. + .-.||+||||||..|+.++|..+..... ...
T Consensus 74 ~~~~a~~~~~~~~~~nl~d~~~~p~a~~~E~~~v~~l~~l~~~~~~~~G~~t~GgTean~lal~aar~~~~~~~~~~~~~ 153 (460)
T COG0076 74 VPPVAAELLVSALNKNLGDPDESPAAAELEERVVNMLSDLLGAPEEASGTFTSGGTEANLLALLAARERWRKRALAESGK 153 (460)
T ss_pred CHHHHHHHHHHHHhhcCCCcccChhHHHHHHHHHHHHHHHhCCCCCCceEEEcChHHHHHHHHHHHHHHHHHHhhhcccc
Confidence 45666677777666532211122 223366777778887763 3 5789999999999999999976642110 000
Q ss_pred CCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCC-eeEeeCCCHHHHHHhcCCCCeEE-EEEccccCCCCccccC
Q 013008 188 EPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPG-VNFVEYGNIEATRKLIQPGKTAA-VFVEPIQGEGGIYSAT 265 (451)
Q Consensus 188 ~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~le~~l~~~~~aa-vi~ep~~~~~G~~~~~ 265 (451)
..+...|+.....|-+..-+..+-|-.... .+..+. ... |+++|++++++..+.. |+..--....|.+=+
T Consensus 154 ~~~~P~ii~s~~aH~s~~Kaa~~lG~~~~~---v~~~~~~~~i----d~~~l~~~i~~~t~~g~vV~~aGtT~~G~iDd- 225 (460)
T COG0076 154 PGGKPNIVCSETAHFSFEKAARYLGLGLRR---VPTVPTDYRI----DVDALEEAIDENTIGGVVVGTAGTTDTGSIDD- 225 (460)
T ss_pred cCCCCeEEecCcchhHHHHHHHHhCCCcee---EEeccCcccc----CHHHHHHHHHhhccCceEEEEecCCCCCccCC-
Confidence 011225666667787766555544322111 122221 111 8999999998655442 443333344455555
Q ss_pred HHHHHHHHHHHHHhCCEEEEeccccCCCcc--cccccccccCC-Ccceeeec--ccccCCcccccccccHH
Q 013008 266 KEFLQFLRDACDDAGALLVFDEVQCGLGRT--GYLWAHEHYGI-FPDIMTLA--KPLAGGLPIGAALVTEK 331 (451)
Q Consensus 266 ~~~l~~l~~l~~~~g~llI~DEv~tg~gr~--G~~~~~~~~~~-~pdi~t~s--K~lg~G~~iG~v~~~~~ 331 (451)
+++|.++|+++|+++++|-++.||-.. ...+.+ .+++ ..|-++++ |.+..-++.|+++.+++
T Consensus 226 ---i~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~~~-~f~l~~vdSIt~d~HK~g~aP~~~G~il~rd~ 292 (460)
T COG0076 226 ---IEELADIAEEYGIWLHVDAAFGGFLLPFLEPDGRW-DFGLEGVDSITVDGHKYGLAPIGCGVVLFRDE 292 (460)
T ss_pred ---HHHHHHHHHHcCCcEEEEccccceeecccCccchh-hcCCCCceEEEECcccccCCCCCceEEEEECH
Confidence 999999999999999999999886321 111110 1234 45666666 65544578889888644
No 358
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=98.84 E-value=1.3e-07 Score=93.28 Aligned_cols=266 Identities=18% Similarity=0.236 Sum_probs=134.4
Q ss_pred HHhhccCCC----eEEe-cCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccC-----C-CCc
Q 013008 148 RLVACSFAD----RVFF-SNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTS-----K-EHY 216 (451)
Q Consensus 148 ~l~~~~~~e----~v~~-~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~-----~-~~~ 216 (451)
+..+.++.+ .+-+ ..||+.||..++.++.. ++|+|+.++...-|+..-...... . ..+
T Consensus 74 ra~~lF~~~~~~w~anvqp~SGs~An~av~~aLl~-----------pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~ 142 (399)
T PF00464_consen 74 RAKELFGAEPKEWYANVQPHSGSQANLAVYMALLK-----------PGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYF 142 (399)
T ss_dssp HHHHHHT-STTTEEEE---SSHHHHHHHHHHHHT------------TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHS
T ss_pred HHHHHhCCCcccceEEeecCCchHHHHHHHHHHHh-----------hcCcEEecChhhcccccccccccccccccccceE
Confidence 344556655 3322 46799999999987663 799999998766444322111100 0 000
Q ss_pred CCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEecccc-CCCcc
Q 013008 217 RSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQC-GLGRT 295 (451)
Q Consensus 217 ~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-g~gr~ 295 (451)
.....+..++...+ |.++++++++..++++||+....-. .+.+ +++++++|++.|++|++|=.|. |+--.
T Consensus 143 ~~~~y~~d~~~~~I---D~d~l~~~a~~~kPklIi~G~S~y~-----~~~d-~~~~reIad~vga~l~~D~sH~~GLIa~ 213 (399)
T PF00464_consen 143 ESVPYPVDPDTGLI---DYDELEKLAKEHKPKLIICGASSYP-----RPID-FKRFREIADEVGAYLMADISHIAGLIAG 213 (399)
T ss_dssp EEEEEEB-TTTSSB----HHHHHHHHHHH--SEEEEE-SSTS-----S----HHHHHHHHHHTT-EEEEE-TTTHHHHHT
T ss_pred EEEeeeeecCCCeE---CHHHHHHHHhhcCCCEEEECchhcc-----CccC-HHHHHHHHHhcCcEEEecccccccceeh
Confidence 00000111111111 7899999988667889999775422 1222 7999999999999999999984 44222
Q ss_pred cccccccccCCCcceeeec--ccccCCccccccccc--------------HHHHhhccCCCccCCCCCcHHHHHHHH-HH
Q 013008 296 GYLWAHEHYGIFPDIMTLA--KPLAGGLPIGAALVT--------------EKVASAINYGDHGSTFAGSPLVCNAAI-AV 358 (451)
Q Consensus 296 G~~~~~~~~~~~pdi~t~s--K~lg~G~~iG~v~~~--------------~~i~~~~~~~~~~~t~~~~~~~~aaa~-aa 358 (451)
|. + ..-+. ..|++|.| |+|.| -+.|.|+++ +++.+.+....+.+..+++-+-..|++ .+
T Consensus 214 g~-~-~~P~~-~ADvvt~sThKtl~G-PrggiI~~~~~~~~~~~~~~~~~~~l~~~I~~avfP~~qg~~h~~~iaalAva 289 (399)
T PF00464_consen 214 GL-F-PNPFP-YADVVTGSTHKTLRG-PRGGIILTNKGSKNVDKKGKEIDEELAEKIDSAVFPGLQGGPHMHRIAALAVA 289 (399)
T ss_dssp TS-S---GCC-TSSEEEEESSGGG-S-SS-EEEEES-SEEEE-TTS-EEEHHHHHHHHHHHTTTT-SS--HHHHHHHHHH
T ss_pred he-e-cCccc-cceEEEeeccccccc-cCceEEEEcCCccccCCcccccHHHHHHHhccccCCCcccCcchhHHHHHHHH
Confidence 22 1 11223 27888776 88864 466888888 788887764433333333323222222 33
Q ss_pred HHHhcChH---HHHH-------HH----h-CCCCcceecccceeEEEEec---CChHHHHHHHHHCCceeeec----CC-
Q 013008 359 LDKISNPA---FLAS-------KL----A-RNPHVKDVRGLGLIIGIEFD---VSATPVVDACRDSGLLVLTA----GK- 415 (451)
Q Consensus 359 l~~~~~~~---~~~~-------~~----~-~~~~~~~v~g~G~~~~~~~~---~~~~~~~~~l~~~Gv~~~~~----~~- 415 (451)
+.....++ +.++ +. + .+..+... ....++++++. .......+.|.+.||.+... ..
T Consensus 290 l~ea~~~~fk~Ya~qVv~NAk~La~~L~~~G~~v~~gg-Td~H~vlvd~~~~~~~g~~a~~~Le~~gI~vnkn~iP~d~~ 368 (399)
T PF00464_consen 290 LKEALSPEFKEYAKQVVKNAKALAEALQERGFKVVTGG-TDNHQVLVDLRSFGIDGKEAEKALEEAGIIVNKNTIPGDRS 368 (399)
T ss_dssp HHHHTSHHHHHHHHHHHHHHHHHHHHHHHTT-EEGGGS--SSSEEEEEGGGGTS-HHHHHHHHHHTTEE-EEE--TTTST
T ss_pred HhcccCHHHHHHHHHHHHHHHHHHHHHhhCCcEEEECC-CCCCeEEEEecccccchHHHHHHHHhcCeeecccccCCCCC
Confidence 44433332 2222 21 1 22222111 12446777773 34567777888889988532 11
Q ss_pred ---CCEEEEeCC----CCCCHHHHHHHHHH
Q 013008 416 ---GNVVRLVPP----LIISEQELDQAVEI 438 (451)
Q Consensus 416 ---~~~iri~~~----~~~t~e~i~~~l~~ 438 (451)
+..+|+..+ ....++|++++.+.
T Consensus 369 ~~~~sGlRlGT~~lT~rG~~e~dm~~iA~~ 398 (399)
T PF00464_consen 369 PFVPSGLRLGTPALTRRGMKEEDMKEIAEL 398 (399)
T ss_dssp TTT-SEEEEESHHHHHTT--HHHHHHHHHH
T ss_pred CCCCCEEEECCHHHHhCCCCHHHHHHHHhh
Confidence 246898644 34567777766654
No 359
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=98.77 E-value=3.7e-06 Score=92.09 Aligned_cols=294 Identities=11% Similarity=0.079 Sum_probs=158.0
Q ss_pred CCC-CCHHHHHHHHHHHhhcccccCCCCCH-------HHHHHHHHHhhccC--CCeEEecCCHHHHHHHHHHHHHHHhhh
Q 013008 112 LGH-GDADWIKAVVDQANVLTHVSNMYYSI-------PQIELAKRLVACSF--ADRVFFSNTGTEANEAAIKFARKFQRH 181 (451)
Q Consensus 112 lG~-~~p~v~~a~~~~~~~~~~~~~~~~~~-------~~~~l~~~l~~~~~--~e~v~~~~sG~eA~~~al~~a~~~~~~ 181 (451)
.+| .++.|.+++.+..+-++.+ +.|..+ ...++...+++++| .+++-++.++|.+.++++...+ ++.
T Consensus 113 y~~~~P~~v~~~i~~~~~~~Tay-tPYqaEisQG~lqal~~~Qt~ia~LtG~~~anaSL~d~aTAaaea~~~a~~-~~~- 189 (993)
T PLN02414 113 YNTHVPPVILRNILENPGWYTQY-TPYQAEIAQGRLESLLNYQTMITDLTGLPMSNASLLDEGTAAAEAMAMCNN-ILK- 189 (993)
T ss_pred CCccCCHHHHHHHHhChHHHhhc-CCCchHHHHHHHHHHHHHHHHHHHHhCCChhhEeecCChHHHHHHHHHHHh-ccc-
Confidence 344 5566668888766543322 223222 14466677888888 4579999999999997776443 221
Q ss_pred cCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEccccCCCCc
Q 013008 182 SNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGI 261 (451)
Q Consensus 182 ~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~~~~~G~ 261 (451)
.++++|++.+..|... ...+..-. ....-.+..++..+.+ . ..+.+++++ ..+.+..|.
T Consensus 190 ------g~~~~VlVs~~~hP~~-~~v~~t~a--------~~~GieV~~v~~~~~~----~-~~~~v~~vl-vq~P~~~G~ 248 (993)
T PLN02414 190 ------GKKKKFLIASNCHPQT-IDVCQTRA--------DGLGLEVVVADEKDFD----Y-SSGDVCGVL-VQYPATDGE 248 (993)
T ss_pred ------CCCCEEEEcCccCHhH-HHHHHHhh--------hhcCCEEEEecchhhc----c-ccCceEEEE-EecCCCCeE
Confidence 0256788877766443 33322100 1111234444432211 1 123455555 334455677
Q ss_pred cccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccccccCCCcceeeec-cccc-----CCcccccccccHHHHhh
Q 013008 262 YSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLA-KPLA-----GGLPIGAALVTEKVASA 335 (451)
Q Consensus 262 ~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~t~s-K~lg-----~G~~iG~v~~~~~i~~~ 335 (451)
+.+ +++|.++|+++|+++|+ -++. ++-.+. -.... +..|+++.+ ..++ ||-..|++.+++++...
T Consensus 249 v~d----v~~I~~~ah~~GaL~iV-aad~-lal~~l-~~pge--~GADi~vgsgqKwg~P~G~GGP~aGflavr~~~~r~ 319 (993)
T PLN02414 249 VLD----YAEFVKNAHANGVKVVM-ATDL-LALTML-KPPGE--WGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRL 319 (993)
T ss_pred EcC----HHHHHHHHHHcCCEEEE-EECH-HHhcCC-CCHhh--ccCcEEEECCCccccCCCCCCCCeeEEEECHHHHhh
Confidence 777 99999999999999999 3321 211111 01222 346776542 3333 45448888898887664
Q ss_pred ccCC--C--------ccC--------------CCCCcHHHHHHHHHHHH-----HhcChHH---HHH-------HHhCCC
Q 013008 336 INYG--D--------HGS--------------TFAGSPLVCNAAIAVLD-----KISNPAF---LAS-------KLARNP 376 (451)
Q Consensus 336 ~~~~--~--------~~~--------------t~~~~~~~~aaa~aal~-----~~~~~~~---~~~-------~~~~~~ 376 (451)
+... . ... ....|..+..+..+++. .+...++ .++ +.+++.
T Consensus 320 ~PgriVG~s~d~~g~~~~~l~LqtReqhiRrEkaTsNict~qaL~A~la~~y~~~~g~~Gl~~Ia~ri~~la~~l~~~L~ 399 (993)
T PLN02414 320 MPGRIIGVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGVFAAGLK 399 (993)
T ss_pred CCCcccCcccCCCCCcccccccccccchhhhcccccchhHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHh
Confidence 4311 0 000 00122212222222221 1111211 111 222211
Q ss_pred --Ccceecc-cceeEEEEecCChHHHHHHHHHCCceeeecCCCCEEEEeCCCCCCHHHHHHHHHHHH
Q 013008 377 --HVKDVRG-LGLIIGIEFDVSATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILC 440 (451)
Q Consensus 377 --~~~~v~g-~G~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~iri~~~~~~t~e~i~~~l~~l~ 440 (451)
.+..... .--.+.+.++ ...++.++|.++||.+..... +.+|+++....|++|||.+++.|.
T Consensus 400 ~~G~~~~~~~~f~~vt~~~~-~~~~v~~~L~~~gI~l~~~~~-~~lrvs~~e~~T~edId~L~~~l~ 464 (993)
T PLN02414 400 KLGFQVQSLPFFDTVKVKCS-DADAIADAAAKVGINLRVVDA-NTVTVSFDETTTLEDVDKLFKVFA 464 (993)
T ss_pred hcCCccCCCCCcCeEEEecC-CHHHHHHHHHHCCCeeEEecC-CeEEEEeeccCCHHHHHHHHHHHc
Confidence 1111111 1112233333 457899999999998876644 679999999999999999999996
No 360
>PLN02452 phosphoserine transaminase
Probab=98.74 E-value=1.9e-06 Score=85.15 Aligned_cols=297 Identities=9% Similarity=0.006 Sum_probs=170.6
Q ss_pred CCHHHHHHHHHHHhhccc-c------cCCC--CCHHHHHHHHHHhhccC-CC--eE-EecCCHHHHHHHHHHHHHHHhhh
Q 013008 115 GDADWIKAVVDQANVLTH-V------SNMY--YSIPQIELAKRLVACSF-AD--RV-FFSNTGTEANEAAIKFARKFQRH 181 (451)
Q Consensus 115 ~~p~v~~a~~~~~~~~~~-~------~~~~--~~~~~~~l~~~l~~~~~-~e--~v-~~~~sG~eA~~~al~~a~~~~~~ 181 (451)
-+++|.+++.+.+-++.. + +... ......+..+.|.++++ ++ +| ++..||+.++++++.-+..
T Consensus 18 lp~~Vl~~~~~~~~~~~~~g~s~~~~sHRs~~f~~i~~~~~~~L~~l~~~p~~y~v~~l~Gsgt~~~ea~~~nl~~---- 93 (365)
T PLN02452 18 LPANVLAKAQAELYNWEGSGMSVMEMSHRGKEFLSIIQKAEADLRELLDIPDNYEVLFLQGGASTQFAAIPLNLCK---- 93 (365)
T ss_pred CCHHHHHHHHHHHhcccccCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCceEEEEeCccHHHHHHHHHhcCC----
Confidence 578899998887543211 0 0011 11235667777777776 22 44 5557789999999886552
Q ss_pred cCCCCCCCCceEEEEcCCccCChhhhhhcc-CCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEccccCCCC
Q 013008 182 SNPDSKEPATEFVSFTNSFHGRTMGALALT-SKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGG 260 (451)
Q Consensus 182 ~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~~~~~G 260 (451)
+++++++...++.|....-.... +..... ... +...+....++++++ .+.+...|.+.......|
T Consensus 94 -------~~~~~l~~~~G~fg~r~~~~a~~~g~~~~~--~~~--~~~~~~~~~~~~~~~---~~~~~~~v~~~hnETstG 159 (365)
T PLN02452 94 -------PGDKADFVVTGSWSKKAAKEAKKYCKTNVI--ASG--KDEKYTKIPSVSEWE---LTPDAKFVHICANETIHG 159 (365)
T ss_pred -------CCCeEEEEECCHHHHHHHHHHHHhCCCcEE--Eec--CCCCCCCCCChHHcC---CCCCCcEEEECCCCCCCc
Confidence 46778887777666543322211 111100 000 000011112444432 133566777666666667
Q ss_pred ccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccccccCCCcceeeecccccCCcccccccccHHHHhhccCC-
Q 013008 261 IYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINYG- 339 (451)
Q Consensus 261 ~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~t~sK~lg~G~~iG~v~~~~~i~~~~~~~- 339 (451)
+...+ ++++ + ++++|+|-+.+ +| +...-.+.+++ |+.+--|.+|. -.+|.+++++++.+...+.
T Consensus 160 v~~~~---~~~i---~---~~~lvVDa~Ss-~g--~~pidv~~~~v--~~~saqK~lGP-~Gl~~v~vr~~~l~~~~~~~ 224 (365)
T PLN02452 160 VEFKD---YPDV---G---NVPLVADMSSN-FL--SKPVDVSKYGV--IYAGAQKNVGP-SGVTIVIIRKDLIGNARPIT 224 (365)
T ss_pred EecCc---cccc---C---CCeEEEECCcc-cc--CcccCHHHcCE--EEEecccccCC-CCeEEEEEcHHHHhhcccCC
Confidence 63222 3333 2 38999999986 42 33334455554 66666799963 2378888999988765432
Q ss_pred ----------CccCCC-CCcHHHHHHHHHHHHHhcCh-HHH---HH----------HHhCCCCc-ce-ec---ccceeEE
Q 013008 340 ----------DHGSTF-AGSPLVCNAAIAVLDKISNP-AFL---AS----------KLARNPHV-KD-VR---GLGLIIG 389 (451)
Q Consensus 340 ----------~~~~t~-~~~~~~~aaa~aal~~~~~~-~~~---~~----------~~~~~~~~-~~-v~---g~G~~~~ 389 (451)
....++ +.|.....+..++|+.+.++ ++. ++ .+++.+.+ .. +. .....+.
T Consensus 225 ~~~~~~~~~~~~~s~~~TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a~~l~~~l~~~~G~y~~~~~~~~rs~~~vs 304 (365)
T PLN02452 225 PGMLDYKIHAENDSLYNTPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKADLLYDAIDESNGFYVCPVEKSVRSLMNVP 304 (365)
T ss_pred CchhhHHHHHhcCCccCChhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChHHhCCeEEE
Confidence 112333 34556677777888887653 222 11 22333322 11 11 1123444
Q ss_pred EEec--CChHHHHHHHHHCCceeeecCC--CCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 013008 390 IEFD--VSATPVVDACRDSGLLVLTAGK--GNVVRLVPPLIISEQELDQAVEILCKTLPV 445 (451)
Q Consensus 390 ~~~~--~~~~~~~~~l~~~Gv~~~~~~~--~~~iri~~~~~~t~e~i~~~l~~l~~~l~~ 445 (451)
|.++ ....+|.+.+.++|+...++.. ++ +|++.=-.++.|+++.+++.+++.-++
T Consensus 305 F~~~~~~~~~~f~~~~~~~g~~~~~G~r~~gg-~R~s~yna~~~~~v~~L~~~m~~f~~~ 363 (365)
T PLN02452 305 FTLGGSELEAEFVKEAAKAGMVQLKGHRSVGG-MRASIYNAMPLAGVEKLVAFMKDFQAK 363 (365)
T ss_pred EEcCCchhHHHHHHHHHHCCCcccCCccccCc-eEEECcCCCCHHHHHHHHHHHHHHHHh
Confidence 5442 2467899999999999988754 34 899888899999999999999887543
No 361
>PRK15029 arginine decarboxylase; Provisional
Probab=98.74 E-value=1.8e-06 Score=91.92 Aligned_cols=159 Identities=19% Similarity=0.099 Sum_probs=94.9
Q ss_pred HHHHHHHHhhccCCCe-EEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCC-CCcCCC
Q 013008 142 QIELAKRLVACSFADR-VFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK-EHYRSP 219 (451)
Q Consensus 142 ~~~l~~~l~~~~~~e~-v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~-~~~~~~ 219 (451)
..+..+..++.++.++ .+.+||.|.+|.+++..+.. ++|+||+ +..-|-+...++.+++. +.|..+
T Consensus 207 I~eAq~~aA~~fgA~~t~FlvNGST~gn~a~i~a~~~-----------~gd~Vlv-~RN~HKSv~~al~L~ga~Pvyl~P 274 (755)
T PRK15029 207 FGESEKYAARVFGADRSWSVVVGTSGSNRTIMQACMT-----------DNDVVVV-DRNCHKSIEQGLILTGAKPVYMVP 274 (755)
T ss_pred HHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHHhcC-----------CCCEEEe-ecccHHHHHHHHHHcCCeEEEecc
Confidence 4455555666788664 55677788888887776662 5666665 55668888888887753 333322
Q ss_pred CcCCCCCee-Eee--CCCHHHHHHhcCC--CCe--------EEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEe
Q 013008 220 FEPVMPGVN-FVE--YGNIEATRKLIQP--GKT--------AAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFD 286 (451)
Q Consensus 220 ~~~~~~~~~-~~~--~~d~~~le~~l~~--~~~--------aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~D 286 (451)
-.. .-++. .++ +-+.+.++++|+. ... ++|++.|.+ .|.... +++|.++|+++|++|++|
T Consensus 275 ~~~-~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY--~Gv~~d----i~~I~~~~h~~~~~llvD 347 (755)
T PRK15029 275 SRN-RYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTY--DGVCYN----AKEAQDLLEKTSDRLHFD 347 (755)
T ss_pred ccc-ccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCC--cceeeC----HHHHHHHHHhcCCeEEEE
Confidence 110 01110 011 0137889888862 111 566666643 354555 899999999999999999
Q ss_pred ccccCCCcccccccc-ccc-----C-CCcc-eeeec--ccccC
Q 013008 287 EVQCGLGRTGYLWAH-EHY-----G-IFPD-IMTLA--KPLAG 319 (451)
Q Consensus 287 Ev~tg~gr~G~~~~~-~~~-----~-~~pd-i~t~s--K~lg~ 319 (451)
|+|.+.-.....+.. ... . ..+| +++-| |.+++
T Consensus 348 EAhGah~~F~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~a 390 (755)
T PRK15029 348 EAWYGYARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNA 390 (755)
T ss_pred CccccccccCccccccccccccccccCCCceEEEEchhhcccc
Confidence 998653223332221 111 1 3477 67666 77753
No 362
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=98.71 E-value=7.4e-07 Score=86.46 Aligned_cols=227 Identities=14% Similarity=0.081 Sum_probs=142.1
Q ss_pred cCCC--CCHHHHHHHHHHHhhcccc----cCCCCCHHHHHHHHHHhhccCCCeEEecCCHHHHHHHHHHHHHHHhhhcCC
Q 013008 111 ALGH--GDADWIKAVVDQANVLTHV----SNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNP 184 (451)
Q Consensus 111 ~lG~--~~p~v~~a~~~~~~~~~~~----~~~~~~~~~~~l~~~l~~~~~~e~v~~~~sG~eA~~~al~~a~~~~~~~~~ 184 (451)
++|- -+|++.+++.+.+..+..- ..+....-...+++.++...+.+.+.++|.-+.|+..++....
T Consensus 33 ~lG~s~~~~e~iea~~~~~~~~v~Le~~l~~g~~~~R~~~~~~~~~~~~~aea~~ivnnn~aAVll~~~al~-------- 104 (395)
T COG1921 33 NLGRSLYSPEAIEAMKEAMRAPVELETDLKTGKRGARLTELAELLCGLTGAEAAAIVNNNAAAVLLTLNALA-------- 104 (395)
T ss_pred cCCCccCCHHHHHHHHHHhcccceeeeecccchhhHHHHHHHHHHhcccchhheeeECCcHHHHHHHHhhhc--------
Confidence 4554 3789999998887763221 0111111134666667777778899999998888888777544
Q ss_pred CCCCCCceEEEEcC----CccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEE-EEccccCCC
Q 013008 185 DSKEPATEFVSFTN----SFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAV-FVEPIQGEG 259 (451)
Q Consensus 185 ~~~~~~~~ii~~~~----~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aav-i~ep~~~~~ 259 (451)
.+..+|+..+ +||-.....+.+.|......+. .......+++.+|..+....+ +..+.++..
T Consensus 105 ----~~~EvVis~g~lV~gg~~~v~d~~~~aG~~l~EvG~---------tn~t~~~d~~~AIne~ta~llkV~s~~~~f~ 171 (395)
T COG1921 105 ----EGKEVVVSRGELVEGGAFRVPDIIRLAGAKLVEVGT---------TNRTHLKDYELAINENTALLLKVHSSNYGFT 171 (395)
T ss_pred ----cCCeEEEEccccccCCCCChhHHHHHcCCEEEEecc---------cCcCCHHHHHHHhccCCeeEEEEeecccccc
Confidence 2334444321 4555555555544432211100 011257888889975433332 334444555
Q ss_pred CccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccccccCCCcceeeec--ccccCCcccccccccHHHHhhcc
Q 013008 260 GIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLA--KPLAGGLPIGAALVTEKVASAIN 337 (451)
Q Consensus 260 G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~t~s--K~lg~G~~iG~v~~~~~i~~~~~ 337 (451)
+.+ + ++++.++|++||+++|+|..-...-+ -.....+.....+|+++|| |.|+ |...|.+++++++++.++
T Consensus 172 ~~l-~----~~~l~~ia~~~~lpvivD~aSg~~v~-~e~~l~~~la~GaDLV~~SgdKllg-GPqaGii~GkKelI~~lq 244 (395)
T COG1921 172 GML-S----EEELVEIAHEKGLPVIVDLASGALVD-KEPDLREALALGADLVSFSGDKLLG-GPQAGIIVGKKELIEKLQ 244 (395)
T ss_pred ccc-c----HHHHHHHHHHcCCCEEEecCCccccc-cccchhHHHhcCCCEEEEecchhcC-CCccceEechHHHHHHHH
Confidence 553 4 88999999999999999977522211 1111233345579999998 7776 457799999999999987
Q ss_pred CCCccCCCCCcHHHHHHHHHHHHHhcCh
Q 013008 338 YGDHGSTFAGSPLVCNAAIAVLDKISNP 365 (451)
Q Consensus 338 ~~~~~~t~~~~~~~~aaa~aal~~~~~~ 365 (451)
.......+-......++..++|+.....
T Consensus 245 ~~~l~Ralrv~K~tla~l~~aLe~y~~~ 272 (395)
T COG1921 245 SHPLKRALRVDKETLAALEAALELYLQP 272 (395)
T ss_pred hhhhhhhhhcCcHhHHHHHHHHHHHcCc
Confidence 5544455556788888889999877654
No 363
>PRK05367 glycine dehydrogenase; Provisional
Probab=98.65 E-value=1e-05 Score=89.00 Aligned_cols=264 Identities=15% Similarity=0.096 Sum_probs=145.4
Q ss_pred HHHHHHHHhhccCC--CeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCC
Q 013008 142 QIELAKRLVACSFA--DRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSP 219 (451)
Q Consensus 142 ~~~l~~~l~~~~~~--e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~ 219 (451)
..++...++++.|. .++.+..+++.+.+.++...+ +++ ..+++|++.+..|. .+...+....
T Consensus 123 l~~~Qt~la~LtG~~~anaSl~d~aTAa~ea~~~a~~-~~~-------~~~~~vlv~~~~hP-~~~~v~~t~a------- 186 (954)
T PRK05367 123 LLNFQTMVADLTGLEIANASLLDEATAAAEAMALAKR-VSK-------SKSNRFFVDDDVHP-QTLDVLRTRA------- 186 (954)
T ss_pred HHHHHHHHHHHHCCChhhccccccHHHHHHHHHHhhh-hcc-------CCCCEEEEcCccCH-HHHHHHHHHH-------
Confidence 34566778888884 477889999999886665443 321 01378888877764 3333221100
Q ss_pred CcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccc
Q 013008 220 FEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLW 299 (451)
Q Consensus 220 ~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~ 299 (451)
.+..-.++.++.++ + ++.+++++++ -.+.+..|.+.+ +++|.++|+++|+++++|-.+..++.. .
T Consensus 187 -~~~G~ev~~~~~~~--d----~~~~~~~~vl-vq~p~~~G~i~d----~~~i~~~ah~~Gal~~vda~~~Al~~l-~-- 251 (954)
T PRK05367 187 -EPLGIEVVVGDAAK--A----LDHDDVFGVL-LQYPGTSGEVRD----YTALIAAAHARGALVAVAADLLALTLL-T-- 251 (954)
T ss_pred -HhCCCEEEEecCcc--C----CCcccEEEEE-EecCCCCeeecc----HHHHHHHHHHcCCEEEEEehhhhccCC-C--
Confidence 01112334444332 1 1233565554 444566777776 999999999999999999755322111 1
Q ss_pred cccccCCCcceeeec--cc---cc-CCcccccccccHHHHhhccCCCc-------c---CC-----------C---CCcH
Q 013008 300 AHEHYGIFPDIMTLA--KP---LA-GGLPIGAALVTEKVASAINYGDH-------G---ST-----------F---AGSP 349 (451)
Q Consensus 300 ~~~~~~~~pdi~t~s--K~---lg-~G~~iG~v~~~~~i~~~~~~~~~-------~---~t-----------~---~~~~ 349 (451)
.... +..|+++.+ |. +| ||--.|++.+++++.+.+.+... + .. + ..|.
T Consensus 252 ~pge--~GaDi~vgs~qkfg~P~g~GGP~aGflavr~~~~r~lpgrivG~s~d~~g~~~~~lalqtReqhiRrekaTsNi 329 (954)
T PRK05367 252 PPGE--MGADIAVGSAQRFGVPMGFGGPHAAYFAVRDAYKRSMPGRIVGVSVDAAGNPALRLALQTREQHIRREKATSNI 329 (954)
T ss_pred Chhh--cCCCEEEeeCcccCCCCCCCCCCEEEEEECHHHHhhCCCCeeeeecccCCCccccccccccccccccccccccc
Confidence 1122 346776543 43 22 34447888889888776642200 0 00 0 0111
Q ss_pred ---HHHHHHHHH--HHHhcChHHHH---H-------HHhCCC--Ccceecccce--eEEEEecCChHHHHHHHHHCCcee
Q 013008 350 ---LVCNAAIAV--LDKISNPAFLA---S-------KLARNP--HVKDVRGLGL--IIGIEFDVSATPVVDACRDSGLLV 410 (451)
Q Consensus 350 ---~~~aaa~aa--l~~~~~~~~~~---~-------~~~~~~--~~~~v~g~G~--~~~~~~~~~~~~~~~~l~~~Gv~~ 410 (451)
.+..++.++ +..+...++.+ + +.+++. .+. +..... .+.+.++.+..++.++|+++||.+
T Consensus 330 ct~qaL~a~~a~~y~~~~g~~Gl~~Ia~~~~~la~~l~~~L~~~G~~-~~~~~~f~~~~~~~~~~~~~i~~~l~~~gi~~ 408 (954)
T PRK05367 330 CTAQVLLAVMASMYAVYHGPEGLKAIARRVHRLAAILAAGLRALGLE-VVHDSFFDTLTVEVGGDAAAVLARALAAGINL 408 (954)
T ss_pred chHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhcCcc-cCCCCCCCeEEEeCCCCHHHHHHHHHHCCcee
Confidence 111112222 12222222211 1 122211 111 111111 222333346788999999999998
Q ss_pred eecCCCCEEEEeCCCCCCHHHHHHHHHHHH
Q 013008 411 LTAGKGNVVRLVPPLIISEQELDQAVEILC 440 (451)
Q Consensus 411 ~~~~~~~~iri~~~~~~t~e~i~~~l~~l~ 440 (451)
..... +.+|+++....|++||+.+++.|.
T Consensus 409 ~~~~~-~~l~is~~e~~t~~did~l~~~l~ 437 (954)
T PRK05367 409 RRVDD-DHVGISLDETTTREDLAALLAVFG 437 (954)
T ss_pred ccccC-CEEEEEecccCCHHHHHHHHHHHc
Confidence 65433 679999999999999999999996
No 364
>PRK13578 ornithine decarboxylase; Provisional
Probab=98.62 E-value=5.5e-06 Score=87.45 Aligned_cols=160 Identities=16% Similarity=0.098 Sum_probs=92.2
Q ss_pred HHHHHHHHHHhhccCCCe-EEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhh-hhccC-CCCc
Q 013008 140 IPQIELAKRLVACSFADR-VFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGA-LALTS-KEHY 216 (451)
Q Consensus 140 ~~~~~l~~~l~~~~~~e~-v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~-~~~~~-~~~~ 216 (451)
....+-.+..++.++.++ .+++||.|.+|..++.++.. ++|+|| ++...|=+...+ +.++| .+.|
T Consensus 174 G~i~eAq~~AA~~fgAd~tyFlvNGTS~gn~a~i~a~~~-----------~Gd~VL-vdRN~HKSv~hgaLiLsGa~PVY 241 (720)
T PRK13578 174 GAAKDAQKHAAKVFNADKTYFVLNGTSASNKVVTNALLT-----------PGDLVL-FDRNNHKSNHHGALIQAGATPVY 241 (720)
T ss_pred hHHHHHHHHHHHHhCCCceEEEeCChhHHHHHHHHHhcC-----------CCCEEE-eecccHHHHHHHHHHHcCCeEEE
Confidence 335566666777788765 45577778888888887662 466555 556668777764 66654 3444
Q ss_pred CCCCcCCCCCee-EeeCC--CHHHHHHhcCCC----------CeEEEEEccccCCCCccccCHHHHHHHHHH-HHHhCCE
Q 013008 217 RSPFEPVMPGVN-FVEYG--NIEATRKLIQPG----------KTAAVFVEPIQGEGGIYSATKEFLQFLRDA-CDDAGAL 282 (451)
Q Consensus 217 ~~~~~~~~~~~~-~~~~~--d~~~le~~l~~~----------~~aavi~ep~~~~~G~~~~~~~~l~~l~~l-~~~~g~l 282 (451)
..+-.. .-++. -++.. +.+.++++|+.. -.++||+.|.+ .|.+.. +++|.++ |+.++ +
T Consensus 242 l~P~~n-~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTY--dG~~yd----i~~I~~~~~h~~~-~ 313 (720)
T PRK13578 242 LETARN-PFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTY--DGTIYN----ARQVVDKIGHLCD-Y 313 (720)
T ss_pred eecccc-ccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCCC--cceeec----HHHHHHHhhccCC-c
Confidence 322110 01110 11111 356688888632 13456666643 355555 8889888 68888 9
Q ss_pred EEEeccccCCCccccc---ccccccCCCcc----eeeec--ccccC
Q 013008 283 LVFDEVQCGLGRTGYL---WAHEHYGIFPD----IMTLA--KPLAG 319 (451)
Q Consensus 283 lI~DEv~tg~gr~G~~---~~~~~~~~~pd----i~t~s--K~lg~ 319 (451)
|++||+|.+.-..... +........+| ++|-| |.+++
T Consensus 314 llvDEAhgah~~F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL~a 359 (720)
T PRK13578 314 ILFDSAWVGYEQFIPMMADCSPLLLELNENDPGIFVTQSVHKQQAG 359 (720)
T ss_pred EEEeCcchhhhccCcccccCChhhhhcCCCCCCeEEEEChhhcchh
Confidence 9999998653222221 11112334566 77666 76653
No 365
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=98.62 E-value=2.5e-06 Score=84.42 Aligned_cols=286 Identities=14% Similarity=0.079 Sum_probs=153.7
Q ss_pred CHH-HHHHHHHHHhhcccccCCCCCHHHHHHHHHHhhccCC--C--eEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCC
Q 013008 116 DAD-WIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFA--D--RVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPA 190 (451)
Q Consensus 116 ~p~-v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~--e--~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~ 190 (451)
+|. +++++.+++-...|.+ .-......+..+.|.+.++. + -++++.||+.|+++++..+.. +++
T Consensus 15 ~~~~~~~~~~~~~~~~~HRs-~~F~~i~~e~~~~L~~l~~~~~~~~v~~l~GsGT~a~Eaa~~nl~~----------~~g 83 (374)
T TIGR01365 15 RPGWSIEELKNAPLGRSHRS-KLGKEKLAEAIKKTREMLGVPADYLIGIVPASDTGAVEMALWSMLG----------CRG 83 (374)
T ss_pred CchhhHHHHhhhhcccCcCC-HHHHHHHHHHHHHHHHHhCCCCCcEEEEECCchHHHHHHHHHHcCC----------CCC
Confidence 566 5555555433222211 11122356667777777762 2 367799999999999996551 146
Q ss_pred ceEEEEcCCccCChhh-hh-hccCCCCcCCCCcCCCCCeeEeeCC---CHHHHHHhcCCCCeEEEEEccccCCCCccccC
Q 013008 191 TEFVSFTNSFHGRTMG-AL-ALTSKEHYRSPFEPVMPGVNFVEYG---NIEATRKLIQPGKTAAVFVEPIQGEGGIYSAT 265 (451)
Q Consensus 191 ~~ii~~~~~yhg~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~---d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~ 265 (451)
+++++. + +.|.... -+ ...+... ..+...+++ |+++++. ...+.++.+|+ .+|+..+
T Consensus 84 ~~vLv~-g-~FG~r~~~eia~~~g~~~---------v~~l~~~~g~~~~~~~ve~---~~~v~~vhnET---STGv~np- 145 (374)
T TIGR01365 84 VDVLAW-E-SFGKGWVTDVTKQLKLPD---------VRVLEAEYGKLPDLKKVDF---KNDVVFTWNGT---TSGVRVP- 145 (374)
T ss_pred CeEEEE-C-HHHHHHHHHHHHhcCCCC---------cEEEcCCCCCCCCHHHcCC---CCCEEEecCCC---chheecc-
Confidence 778874 3 3343311 11 1111100 011112222 6677652 22343333443 3455554
Q ss_pred HHHHHHHHHHHHH-hCCEEEEeccccCCCcccccccccccCCCcceeeec--ccccCCcccccccccHHHHhhccCC---
Q 013008 266 KEFLQFLRDACDD-AGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLA--KPLAGGLPIGAALVTEKVASAINYG--- 339 (451)
Q Consensus 266 ~~~l~~l~~l~~~-~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~t~s--K~lg~G~~iG~v~~~~~i~~~~~~~--- 339 (451)
+++ ++++ +++++|+|-|-+ +| |..+-.+ + .|++..| |+|++--.+++++.+++..+.....
T Consensus 146 ---v~~---i~~~~~~~lliVDavSs-~g--~~~l~~d--~--iDv~~tgsQK~L~~ppGls~v~vs~~Al~~~~~~~~y 212 (374)
T TIGR01365 146 ---NGD---FIPADREGLTICDATSA-AF--AQDLDYH--K--LDVVTFSWQKVLGGEGAHGMLILSPRAVARLESYTPA 212 (374)
T ss_pred ---ccc---cccccCCCcEEEEccch-hc--CCCCChh--H--CcEEEEechhccCCCCceEEEEECHHHHHHHhhcCCC
Confidence 443 3333 589999998864 53 3333233 2 6766554 9998533456777787766543310
Q ss_pred -------------------CccCCCC-CcHHHHHHHHHHHHHhcCh-HHHHH-------------HHhCCC---Ccc---
Q 013008 340 -------------------DHGSTFA-GSPLVCNAAIAVLDKISNP-AFLAS-------------KLARNP---HVK--- 379 (451)
Q Consensus 340 -------------------~~~~t~~-~~~~~~aaa~aal~~~~~~-~~~~~-------------~~~~~~---~~~--- 379 (451)
....|.. .+.....++..+|+.++++ ++..+ ..+.++ ...
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~t~~TP~v~~l~a~~~~l~~i~~egGle~~~~Rh~~~a~~l~~~l~~lg~l~~~~~~~ 292 (374)
T TIGR01365 213 WPLPKIFRLTKGGKLNKKIFEGSTINTPSMLCVEDWLDALKWAESIGGLKPLIARADDNLAVLEAFVAKNNWIHFLAETP 292 (374)
T ss_pred CCChhhhccccccchhhhhhcCCCCCChHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCCh
Confidence 0122332 2344455566667655443 22222 122333 111
Q ss_pred eecccceeEEEEe-cC-------C-----hHHHHHHHHHCCceeeecCC---CCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 013008 380 DVRGLGLIIGIEF-DV-------S-----ATPVVDACRDSGLLVLTAGK---GNVVRLVPPLIISEQELDQAVEILCKTL 443 (451)
Q Consensus 380 ~v~g~G~~~~~~~-~~-------~-----~~~~~~~l~~~Gv~~~~~~~---~~~iri~~~~~~t~e~i~~~l~~l~~~l 443 (451)
..+.. ....+.+ +. + ..+|.+.|.++|+.+.++.. +..+||.---.++.+|++.+++.|+=+.
T Consensus 293 ~~rS~-tvt~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~i~~G~~~~~~~~fRIg~~G~i~~~di~~l~~~l~~~~ 371 (374)
T TIGR01365 293 EIRSN-TSVCLKVVDPAIDALDEDAQADFAKELISTLEKEGVAYDIGSYRDAPSGLRIWCGATVEKSDLECLCPWLDWAF 371 (374)
T ss_pred hhcCC-CeEEEEeCCccccccccchhhHHHHHHHHHHHHCCEEEeccccccCCCceEEecCCcCCHHHHHHHHHHHHHHH
Confidence 11221 2233333 11 2 57788999999998887643 5789998777899999999999998665
Q ss_pred H
Q 013008 444 P 444 (451)
Q Consensus 444 ~ 444 (451)
.
T Consensus 372 ~ 372 (374)
T TIGR01365 372 A 372 (374)
T ss_pred h
Confidence 4
No 366
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=98.58 E-value=4.8e-07 Score=89.87 Aligned_cols=172 Identities=24% Similarity=0.212 Sum_probs=100.5
Q ss_pred HHHHHHHHhhccCCC---------eEEecCCHHHHHHHHHHHHHHHhhhcC---CCCCCCCceEEEEcCCccCChhhhhh
Q 013008 142 QIELAKRLVACSFAD---------RVFFSNTGTEANEAAIKFARKFQRHSN---PDSKEPATEFVSFTNSFHGRTMGALA 209 (451)
Q Consensus 142 ~~~l~~~l~~~~~~e---------~v~~~~sG~eA~~~al~~a~~~~~~~~---~~~~~~~~~ii~~~~~yhg~~~~~~~ 209 (451)
+.++.+++++.++.+ .-++|+||++||..|+.++|....... +.. +..+.+++.+..-|-+..-+..
T Consensus 81 E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~-~~~~~~i~~s~~aH~S~~Kaa~ 159 (373)
T PF00282_consen 81 EREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVE-EIPKPVIYVSEQAHYSIEKAAR 159 (373)
T ss_dssp HHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTT-HCSSEEEEEETTS-THHHHHHH
T ss_pred hHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccc-cccccccccccccccHHHHhcc
Confidence 666777788877733 578999999999999999986542110 000 0123466666656766555544
Q ss_pred ccCCCCcCCCCcCCCCCeeEeeCC-----CHHHHHHhcC----CCCeE-EEEEccccCCCCccccCHHHHHHHHHHHHHh
Q 013008 210 LTSKEHYRSPFEPVMPGVNFVEYG-----NIEATRKLIQ----PGKTA-AVFVEPIQGEGGIYSATKEFLQFLRDACDDA 279 (451)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~le~~l~----~~~~a-avi~ep~~~~~G~~~~~~~~l~~l~~l~~~~ 279 (451)
..|-. ++.+|.+ |+++|+++|+ .+.+. +|+..--....|.+-+ +++|+++|++|
T Consensus 160 ~lGlg------------~~~I~~~~~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~----l~~i~~i~~~~ 223 (373)
T PF00282_consen 160 ILGLG------------VRKIPTDEDGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDP----LEEIADICEKY 223 (373)
T ss_dssp HTTSE------------EEEE-BBTTSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-S----HHHHHHHHHHC
T ss_pred eeeeE------------EEEecCCcchhhhHHHhhhhhcccccccccceeeeccCCCcccccccC----HHHHhhhcccc
Confidence 43322 2222222 7889988886 22333 3333333334566555 99999999999
Q ss_pred CCEEEEeccccCCCcccccccccccCC-Ccceeeec--ccccCCcccccccccH
Q 013008 280 GALLVFDEVQCGLGRTGYLWAHEHYGI-FPDIMTLA--KPLAGGLPIGAALVTE 330 (451)
Q Consensus 280 g~llI~DEv~tg~gr~G~~~~~~~~~~-~pdi~t~s--K~lg~G~~iG~v~~~~ 330 (451)
+++|++|-++.|....-+..-.-..++ ..|-+++. |.++..++.|+++.++
T Consensus 224 ~~wlHVDaA~gg~~~~~~~~~~~~~gi~~adSit~d~HK~l~~P~~~~~~l~r~ 277 (373)
T PF00282_consen 224 NIWLHVDAAYGGSALLSPEYRHLLFGIERADSITIDPHKWLGVPYGCGVLLVRD 277 (373)
T ss_dssp T-EEEEEETTGGGGGGHCTTGGGGTTGGGESEEEEETTTTTS-SSS-EEEEESS
T ss_pred ceeeeecccccccccccccccccccccccccccccchhhhhcCCccceeEEeec
Confidence 999999999877322111111112233 35666554 8887678889888764
No 367
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=98.57 E-value=7e-06 Score=82.89 Aligned_cols=287 Identities=18% Similarity=0.224 Sum_probs=174.2
Q ss_pred HHHHHHHHHhhccCCCeEEe-cCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCC
Q 013008 141 PQIELAKRLVACSFADRVFF-SNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSP 219 (451)
Q Consensus 141 ~~~~l~~~l~~~~~~e~v~~-~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~ 219 (451)
...+|++.|++..|.|.+.| -|||.++-.+.++..|.|...++.. -..|-...-+-||....+..+.|-...-..
T Consensus 583 lf~~Le~~Lc~iTG~D~~s~QPNsGA~GEYaGL~~IRaY~~~kge~----hRnvClIPvSAHGTNPASA~MagmkvvpV~ 658 (1001)
T KOG2040|consen 583 LFTELEKDLCEITGFDSFSLQPNSGAQGEYAGLRVIRAYLESKGEG----HRNVCLIPVSAHGTNPASAAMAGMKVVPVG 658 (1001)
T ss_pred HHHHHHHHhheeecccceeecCCCCcccchhhHHHHHHHHHhccCC----cceeEEEeecccCCChhhHHhcCCEEEEee
Confidence 35689999999999888776 5789999999999999998766543 233444445779987666555442211000
Q ss_pred CcCCCCCeeEeeCCCHHHHHHhcC--CCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEecc----ccCCC
Q 013008 220 FEPVMPGVNFVEYGNIEATRKLIQ--PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEV----QCGLG 293 (451)
Q Consensus 220 ~~~~~~~~~~~~~~d~~~le~~l~--~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv----~tg~g 293 (451)
. ...+ . -|+.+|+...+ .++.+++++.=. ++-|...+ -++++.++.++||.-++.|-+ |-|+.
T Consensus 659 ~--~~~G-~----id~~dLk~kaekh~~~Laa~MvTYP-ST~GvfE~---~i~d~cd~iHehGGQVYlDGANMNAqVGlc 727 (1001)
T KOG2040|consen 659 C--DANG-N----IDMVDLKAKAEKHKDNLAALMVTYP-STHGVFEE---GIDDICDIIHEHGGQVYLDGANMNAQVGLC 727 (1001)
T ss_pred c--cCCC-C----ccHHHHHHHHHHhhhhhheeEEecc-cccccccc---cHHHHHHHHHhcCCEEEecCCCccceeccc
Confidence 0 0000 0 17888887776 456777777533 34454333 288899999999999999986 55666
Q ss_pred ccccccc-ccccCCCcceeeecccccC-CcccccccccHHHHhhccCC-----------CccCCCCCcHH----HHHHHH
Q 013008 294 RTGYLWA-HEHYGIFPDIMTLAKPLAG-GLPIGAALVTEKVASAINYG-----------DHGSTFAGSPL----VCNAAI 356 (451)
Q Consensus 294 r~G~~~~-~~~~~~~pdi~t~sK~lg~-G~~iG~v~~~~~i~~~~~~~-----------~~~~t~~~~~~----~~aaa~ 356 (451)
+.|..++ ..|+++.- ||.-..|| |-.+|-+.+++.+...+... ...++.+..|. ......
T Consensus 728 ~pGd~GaDV~HLNLHK---TFcIPHGGGGPg~gPIgVK~HLapfLP~HpVvs~~~~~~~~~~gsVsaaP~Gsa~ILpISw 804 (1001)
T KOG2040|consen 728 RPGDIGADVCHLNLHK---TFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSPGRPEDTSPVGSVSAAPWGSALILPISW 804 (1001)
T ss_pred CCccccccceeecccc---eeeecCCCCCCCCCccchhhhccccCCCCCccCCCCCCCCCCccceeccCCCcceeehhHH
Confidence 6665322 22333221 44444555 46677777888877765321 01122222232 233334
Q ss_pred HHHHHhcChHHHHH--------------HHhCCCCcceecccceeEEEEe--c---------CChHHHHHHHHHCCceee
Q 013008 357 AVLDKISNPAFLAS--------------KLARNPHVKDVRGLGLIIGIEF--D---------VSATPVVDACRDSGLLVL 411 (451)
Q Consensus 357 aal~~~~~~~~~~~--------------~~~~~~~~~~v~g~G~~~~~~~--~---------~~~~~~~~~l~~~Gv~~~ 411 (451)
+-++.+-..++.+. +...++.+ .++.-..++-+| + ..+.+++++|.+.|....
T Consensus 805 aYikmMG~~GL~~as~~AiLNaNYMakRLe~hYkil--~~~~~~~vaHEFIlD~r~fK~~agieavDvAKRL~DYgFHaP 882 (1001)
T KOG2040|consen 805 AYIKMMGSGGLKDASKIAILNANYMAKRLESHYKIL--FRGENGLVAHEFILDLRPFKKTAGIEAVDVAKRLMDYGFHAP 882 (1001)
T ss_pred HHHHHhcccccchhhHHHhhhhHHHHHHHhhcccee--EecCCcceeeeeeeechhhccccCCcHHHHHHHHHhccCCCC
Confidence 44555443333222 33344433 233322444333 1 356789999999998654
Q ss_pred ecC--CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHh
Q 013008 412 TAG--KGNVVRLVPPLIISEQELDQAVEILCKTLPVLD 447 (451)
Q Consensus 412 ~~~--~~~~iri~~~~~~t~e~i~~~l~~l~~~l~~~~ 447 (451)
.-. -.+.+.|-|.-.-+++|+|++++++-..-++++
T Consensus 883 TmswPV~gtLMIEPTESE~k~ElDRfcdAliSIreEI~ 920 (1001)
T KOG2040|consen 883 TMSWPVAGTLMIEPTESEDKAELDRFCDALISIREEIA 920 (1001)
T ss_pred ccccccCCceEeccCccccHHHHHHHHHHHHHHHHHHH
Confidence 221 136789998888899999999999877766654
No 368
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=98.57 E-value=7e-08 Score=92.74 Aligned_cols=229 Identities=16% Similarity=0.130 Sum_probs=55.8
Q ss_pred ccCCCC--CHHHHHHHHHHHhhcccc-cCC--C-CCHHHHHHHHHHhhccCCCeEEecCCHHHHHHHHHHHHHHHhhhcC
Q 013008 110 NALGHG--DADWIKAVVDQANVLTHV-SNM--Y-YSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSN 183 (451)
Q Consensus 110 ~~lG~~--~p~v~~a~~~~~~~~~~~-~~~--~-~~~~~~~l~~~l~~~~~~e~v~~~~sG~eA~~~al~~a~~~~~~~~ 183 (451)
.+||-+ +|++.+++.+.+..+..- +.. + --.-+..+++.+++..+.|..+++|....|+..++....
T Consensus 11 TnLGRs~l~~~a~~a~~~~a~~Y~nLE~dl~~G~Rg~R~~~v~~ll~~ltgAeaA~VvNnnaAAv~L~l~~la------- 83 (367)
T PF03841_consen 11 TNLGRSPLSEEAIEAVAEVASGYSNLEYDLETGKRGSRYAHVEELLCELTGAEAALVVNNNAAAVLLALNTLA------- 83 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-------
Confidence 356653 477888887766543221 000 0 001134566777888899999999999999888887554
Q ss_pred CCCCCCCceEEEEcCCc---cCC--hhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEccccCC
Q 013008 184 PDSKEPATEFVSFTNSF---HGR--TMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGE 258 (451)
Q Consensus 184 ~~~~~~~~~ii~~~~~y---hg~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~~~~ 258 (451)
.+..||+..+-- .|. ....+..+|..... +-......+++.+++|.+++.+.+.+-+.+..
T Consensus 84 -----~~~EvIvsRGelVeiGgsFRip~vm~~sGa~lvE---------VGttN~t~~~Dye~AI~e~Ta~ll~Vh~Sn~~ 149 (367)
T PF03841_consen 84 -----KGKEVIVSRGELVEIGGSFRIPDVMRQSGARLVE---------VGTTNRTHLSDYEKAITENTAALLKVHTSNFR 149 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -----cccccccccccccccccccccccccccccccccc---------cccccccccccccccccccccccccccccccc
Confidence 244555543311 111 11111112211100 00000114677888887644444456644332
Q ss_pred -CC--ccccCHHHHHHHHHHHHHhCCEEEEeccc------cCCCcccccccccccCCCcceeeec--ccccCCccccccc
Q 013008 259 -GG--IYSATKEFLQFLRDACDDAGALLVFDEVQ------CGLGRTGYLWAHEHYGIFPDIMTLA--KPLAGGLPIGAAL 327 (451)
Q Consensus 259 -~G--~~~~~~~~l~~l~~l~~~~g~llI~DEv~------tg~gr~G~~~~~~~~~~~pdi~t~s--K~lg~G~~iG~v~ 327 (451)
.| ..++ ++++.+++++|++++|.|--- +.+|..+..-..+.....+|++||| |.||| -..|.++
T Consensus 150 i~GFt~~~~----~~el~~la~~~~lp~i~DlgsG~l~dl~~~gl~~Ep~v~~~~~~GaDlV~fSGdKlLGG-PQaGiI~ 224 (367)
T PF03841_consen 150 IQGFTGEVS----LEELAELAKEHGLPVIVDLGSGLLVDLSPYGLPDEPTVQEYLAAGADLVTFSGDKLLGG-PQAGIIV 224 (367)
T ss_dssp ---------------HHHHHHHHHT--EEEE-TTHHHHHHHTT----------CCCCT-SEEEEETTSSSSS--S-EEEE
T ss_pred ccccccccc----HHHHHHHHhhcCCcEEEECCCCCCcCcccccCccccHHHHHhhcCCCEEEEECCCcCCC-CCeEEEE
Confidence 22 1233 999999999999999999653 1122223333334445568999998 77765 4568999
Q ss_pred ccHHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcC
Q 013008 328 VTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISN 364 (451)
Q Consensus 328 ~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~ 364 (451)
+++++++.++.......+-..-+..++..++|+...+
T Consensus 225 Gkk~lI~~lk~~pl~RalrvdK~tla~L~atL~~Y~~ 261 (367)
T PF03841_consen 225 GKKELIEKLKKHPLGRALRVDKLTLAALEATLRLYLD 261 (367)
T ss_dssp EEHHHHHHHHHHHHTTT-B--HHHHHHHHHHHHH---
T ss_pred eCHHHHHHHhhCCCcceEeeCHHHHHHHHHHHHHHHH
Confidence 9999999987544444556678888899999987543
No 369
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=98.51 E-value=9e-06 Score=77.64 Aligned_cols=203 Identities=17% Similarity=0.137 Sum_probs=116.1
Q ss_pred CCHHHHHHHHHH-Hhh--cccccCCCCC-HHHHHHHHHHhhccCCCeEEe---cCCHHHHHHHHHHHHHHHhhhcCCCCC
Q 013008 115 GDADWIKAVVDQ-ANV--LTHVSNMYYS-IPQIELAKRLVACSFADRVFF---SNTGTEANEAAIKFARKFQRHSNPDSK 187 (451)
Q Consensus 115 ~~p~v~~a~~~~-~~~--~~~~~~~~~~-~~~~~l~~~l~~~~~~e~v~~---~~sG~eA~~~al~~a~~~~~~~~~~~~ 187 (451)
|+-+|.+|+++. +.. +...+++++. ..++.|++-.++.++.|..++ ..|||.|+..++...+.
T Consensus 25 Nq~KVL~Af~~~~vs~~hf~~tTGYGY~D~GRd~le~iyA~vfgaE~ALVRpq~vSGTHAi~~~Lfg~Lr---------- 94 (403)
T PF06838_consen 25 NQLKVLKAFQENRVSDSHFAGTTGYGYDDIGRDKLERIYADVFGAEDALVRPQFVSGTHAIALALFGVLR---------- 94 (403)
T ss_dssp HHHHHHHHHHHTT--GGGCS---TT-TT-HHHHHHHHHHHHHCT-SEEEEETTS-SHHHHHHHHHHHH------------
T ss_pred HHHHHHHHHHHcCCChhhcCCCCcCCCCCccHHHHHHHHHHHhCchhhhhcccccchHHHHHHHHHhcCC----------
Confidence 456677777763 322 1112223333 448999999999999887775 46899999999997663
Q ss_pred CCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeC-----CCHHHHHHhcCCCCeEEEEEccccCCCCcc
Q 013008 188 EPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEY-----GNIEATRKLIQPGKTAAVFVEPIQGEGGIY 262 (451)
Q Consensus 188 ~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~le~~l~~~~~aavi~ep~~~~~G~~ 262 (451)
|+|+++...+.=.-.....+.+.+... ..+....-....++. -|++.+++.++ .++++|++--.-|-.---
T Consensus 95 -pGD~ll~~tG~PYDTL~~VIG~~g~~~--GSL~e~Gi~Y~~v~L~~dg~~D~~~i~~~~~-~~tk~v~IQRSrGYs~R~ 170 (403)
T PF06838_consen 95 -PGDELLSITGKPYDTLEEVIGIRGNGP--GSLKEFGIKYREVPLTEDGTIDWEAIKKALK-PNTKMVLIQRSRGYSWRP 170 (403)
T ss_dssp -TT-EEEESSSS--CCHHHHHTSSSSSS--SSTGGGT-EEEE--B-TTSSB-HHHHHHHHH-TTEEEEEEE-S-TTSSS-
T ss_pred -CCCeEEEcCCCchhhHHHHhCCCCCCC--CChHHhCceeEEEeecCCCCcCHHHHHHhhc-cCceEEEEecCCCCCCCC
Confidence 799998876532222222222332210 000000111112221 17999999997 478888886655544334
Q ss_pred ccCHHHHHHHHHHHHHh--CCEEEEeccccCCCcccccccccccCCCccee--eecccccCC-c-ccccccccHHHHhhc
Q 013008 263 SATKEFLQFLRDACDDA--GALLVFDEVQCGLGRTGYLWAHEHYGIFPDIM--TLAKPLAGG-L-PIGAALVTEKVASAI 336 (451)
Q Consensus 263 ~~~~~~l~~l~~l~~~~--g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~--t~sK~lg~G-~-~iG~v~~~~~i~~~~ 336 (451)
..+-+.++++.++.|+. ++++.+|..|..|--. .+-..+..|++ +|=|-.||| . ..|||++++++++..
T Consensus 171 sl~i~~I~~~i~~vk~~~p~~iifVDNCYGEFvE~-----~EP~~vGADl~aGSLIKNpGGgiAptGGYIaGr~~lVe~~ 245 (403)
T PF06838_consen 171 SLTIEEIKEIIKFVKEINPDVIIFVDNCYGEFVET-----QEPTEVGADLMAGSLIKNPGGGIAPTGGYIAGRKDLVERA 245 (403)
T ss_dssp ---HHHHHHHHHHHHHH-TTSEEEEE-TTTTTTSS-----S-GGGGT-SEEEEETTSGGGTTT-SS-EEEEESHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhhCCCeEEEEeCCcceeccc-----cCccccchhheeccceeCCCCCccCcCCEEechHHHHHHH
Confidence 45667788888888765 7899999999777322 22234557776 677999998 3 447889999999875
No 370
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=98.48 E-value=9.3e-05 Score=70.24 Aligned_cols=330 Identities=17% Similarity=0.202 Sum_probs=177.0
Q ss_pred CCCEEEeeccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHhhccCCCeEEecCCHHHHHHHHHHHH
Q 013008 96 EGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFA 175 (451)
Q Consensus 96 ~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~e~v~~~~sG~eA~~~al~~a 175 (451)
.+.-+||+.+-.++... + .....||..-=+. +..+.....|++...+.+|.+.++.+.-|-.|-...+..+
T Consensus 44 Sedv~IDLLTDSGTgam--s-~~qwaamm~GDEA------Yagsrs~~~L~~avkdifGfq~~iPthQGRgAE~Il~~i~ 114 (471)
T COG3033 44 SEDVFIDLLTDSGTGAM--T-DKQWAAMMRGDEA------YAGSRSYYALADAVKDIFGFQYTIPTHQGRGAENILIPIL 114 (471)
T ss_pred ccceEEEeeccCCcccc--c-HHHHHHHhccchh------hcccccHHHHHHHHHHhcCceeeeeccCCccHHHHHHHHH
Confidence 34678999876663322 2 2223333321111 1223346788999999999999999999988877777776
Q ss_pred HHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCe-eEeeCC---CHHHHHHhcC---CCCeE
Q 013008 176 RKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGV-NFVEYG---NIEATRKLIQ---PGKTA 248 (451)
Q Consensus 176 ~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---d~~~le~~l~---~~~~a 248 (451)
++... ..++.+.+++++.|.-.+.+-....|... +.-+.+...+. .-.|+- |++.|+++|+ .+++.
T Consensus 115 ik~~~------~~pg~~~~~~sN~~FdTTr~h~~~ng~~~-~n~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~~nvp 187 (471)
T COG3033 115 IKKGE------QEPGSKMVAFSNYHFDTTRGHIQINGATP-RNVYVDEAFDTEVKYPFKGNFDLEKLERLIDEVGADNVP 187 (471)
T ss_pred hhhcc------ccCCccccccccceecchhHHHHhcCCcc-ccccccccccccccCCCCCccCHHHHHHHHHHhCcccCc
Confidence 65211 12577888888877666555444332211 11111100000 112221 8999999997 44566
Q ss_pred EEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccC----CCcc---cc-ccccc-----ccCCCcceeeec-
Q 013008 249 AVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCG----LGRT---GY-LWAHE-----HYGIFPDIMTLA- 314 (451)
Q Consensus 249 avi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg----~gr~---G~-~~~~~-----~~~~~pdi~t~s- 314 (451)
.|++.-.++..|..+-+-+-++++++||++||+.++.|-+-.- |-.. |. .|... .+. ..|-.++|
T Consensus 188 ~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ipvv~Da~RfaENaYFIk~rE~gYrd~sI~~IarEm~s-YaD~~~mS~ 266 (471)
T COG3033 188 YIVLTITNNSAGGQPVSMANMKAVYEIAKKYDIPVVMDAARFAENAYFIKQREPGYRDWSIEEIAREMYS-YADGCTMSA 266 (471)
T ss_pred EEEEEEeccccCCCcchHHhHHHHHHHHHHcCCcEEeehhhhhhhhhhhhhcCcccccccHHHHHHHHHh-hhhhheeec
Confidence 6655544555555788999999999999999999999976321 1000 00 01110 000 23444555
Q ss_pred ccccCC-cccc-cccccHH----HHhhccCC----CccCCCCC-cHHHHHHHHHHHHHhcChHHHHH-------HH----
Q 013008 315 KPLAGG-LPIG-AALVTEK----VASAINYG----DHGSTFAG-SPLVCNAAIAVLDKISNPAFLAS-------KL---- 372 (451)
Q Consensus 315 K~lg~G-~~iG-~v~~~~~----i~~~~~~~----~~~~t~~~-~~~~~aaa~aal~~~~~~~~~~~-------~~---- 372 (451)
|-= | .++| +++.+++ +...++.. .-..||++ ..-.+.|....|...-+.+|+++ +.
T Consensus 267 KKD--~lvnmGGfl~~~D~~~fDvy~~~~~~~V~~eG~~tYGgl~GrdmealAvGL~e~~~~~yl~~Rv~Qv~YL~~~l~ 344 (471)
T COG3033 267 KKD--GLVNMGGFLCFKDDSFFDVYEECRTLVVVQEGFPTYGGLAGRDMEALAVGLREGVNFDYLAHRVAQVQYLADGLE 344 (471)
T ss_pred ccc--ceeccccEEEecCccHHHHHHHHHhheEeeccccccCcccchhHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHH
Confidence 311 2 3444 4444544 44444321 11234443 11122222233443344566655 22
Q ss_pred -hCCCCcceecccceeEEEEe----c------CChHHHHHHHH-HCCceeeecC-----------C-----CCEEEEeCC
Q 013008 373 -ARNPHVKDVRGLGLIIGIEF----D------VSATPVVDACR-DSGLLVLTAG-----------K-----GNVVRLVPP 424 (451)
Q Consensus 373 -~~~~~~~~v~g~G~~~~~~~----~------~~~~~~~~~l~-~~Gv~~~~~~-----------~-----~~~iri~~~ 424 (451)
...|.+.. ..|.-..++. + -.++.|+-+|. +.||-..-.| . -+.+|+.+|
T Consensus 345 ~~GVpi~~p--aGGHavfvda~~~lphip~eqFpaqala~ely~e~GiRavElG~~~~~rd~ktg~q~~~~~elvRltip 422 (471)
T COG3033 345 EAGVPIVQP--AGGHAVFVDAGKFLPHIPAEQFPAQALACELYKEAGIRAVELGSFSLGRDPKTGKQHPPPAELVRLTIP 422 (471)
T ss_pred hcCCeeEec--CCCceEEeehhhhcCCCChhhCcHHHHHHHHHHHhCeeeeeeeceecccCCCccccCCCchheeeEecc
Confidence 22333322 2233333332 1 24566666665 4465443211 0 146899876
Q ss_pred C-CCCHHHHHHHHHHHHHHHHHH
Q 013008 425 L-IISEQELDQAVEILCKTLPVL 446 (451)
Q Consensus 425 ~-~~t~e~i~~~l~~l~~~l~~~ 446 (451)
- +-|.+++|..++.+.+..+.-
T Consensus 423 RrtYt~~HmD~V~~a~~~l~e~~ 445 (471)
T COG3033 423 RRTYTQTHMDFVIEAFKALKENA 445 (471)
T ss_pred ccccchhHHHHHHHHHHHHHhcc
Confidence 4 568999999999998877653
No 371
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=98.40 E-value=0.0001 Score=72.48 Aligned_cols=295 Identities=13% Similarity=0.062 Sum_probs=160.6
Q ss_pred CCHHHHHHHHHHHhhccc-c------cCCC--CCHHHHHHHHHHhhccCC-C--eEEecCC-HHHHHHHHHHHHHHHhhh
Q 013008 115 GDADWIKAVVDQANVLTH-V------SNMY--YSIPQIELAKRLVACSFA-D--RVFFSNT-GTEANEAAIKFARKFQRH 181 (451)
Q Consensus 115 ~~p~v~~a~~~~~~~~~~-~------~~~~--~~~~~~~l~~~l~~~~~~-e--~v~~~~s-G~eA~~~al~~a~~~~~~ 181 (451)
-+++|.+++.+.+-++.. + +.+. ......+..+.|.+.++. + +|+|.+| |+.+.++++.-+..
T Consensus 15 lp~~Vl~~~~~~~~~~~~~g~si~eisHRs~~F~~i~~~~~~~Lr~Ll~~P~~y~Vlfl~GggT~~~ea~~~Nll~---- 90 (364)
T PRK12462 15 LPDTVLEQVRQAVVELPETGLSVLGMSHRSSWFSSLLAQAEADLRDLLGIPDEYGVVFLQGGSSLQFSMIPMNFSR---- 90 (364)
T ss_pred CCHHHHHHHHHHHhcccccCccccccccccHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeccHHHHHHHHHHHcCC----
Confidence 478888888877655221 1 1111 122255667777777762 2 5666555 89999988886541
Q ss_pred cCCCCCCCCceEE-EEcCCccCChhhhhhcc-CCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEccccCCC
Q 013008 182 SNPDSKEPATEFV-SFTNSFHGRTMGALALT-SKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEG 259 (451)
Q Consensus 182 ~~~~~~~~~~~ii-~~~~~yhg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~~~~~ 259 (451)
++++++ +...++.|....-.... +..... ......+...+ .+++.+ .+ +.+.+.|.+..+....
T Consensus 91 -------~g~~~~~~~~tG~fg~r~~~ea~~~g~v~~~--~~~~~~~~~~~--p~~~~~--~~-~~d~~~v~~t~NETst 156 (364)
T PRK12462 91 -------PGAAAPEYVTTGYWSRKAIGEASRVAAMRVV--WDGAASGYRTL--PSLAEL--DW-DARAPFRHYVSNETVE 156 (364)
T ss_pred -------CCCcEEEEEeCCHHHHHHHHHHHhcCCceEe--cCcCCCCCCcC--CCHHHh--cc-CCCCcEEEEccCCCCc
Confidence 466565 55555544432221111 111000 00000011111 134443 11 2345667666666666
Q ss_pred CccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccccccCCCcceeeec--ccccCCcccccccccHHHHhhcc
Q 013008 260 GIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLA--KPLAGGLPIGAALVTEKVASAIN 337 (451)
Q Consensus 260 G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~t~s--K~lg~G~~iG~v~~~~~i~~~~~ 337 (451)
|+..+ ++.+.+++++|+|=+-+ ++ +...-.+.+ |++..| |+||. -.++.++.+++.++...
T Consensus 157 Gv~~~---------~~~~~~~~llvvD~sS~-~~--s~pid~~~~----dvi~agsQKnlgP-~Gltvvivs~~al~~~~ 219 (364)
T PRK12462 157 GLQFP---------DAAGLPDSPLIADMSSD-FM--SRPFDVEAY----GMVYAHAQKNLGP-AGVTVAIIRRALLERVP 219 (364)
T ss_pred eEecC---------cccccCCCeEEEEcCch-hh--CCCCChHHc----cEEEeeccccCCC-CceEEEEECHHHHhhcc
Confidence 76543 33344799999997754 32 333334433 666554 99973 24567778888876653
Q ss_pred CC-----------CccCCCCC-cHHHHHHHHHHHHHhcCh--HHHHH-------------HHhCCC----Ccceecccce
Q 013008 338 YG-----------DHGSTFAG-SPLVCNAAIAVLDKISNP--AFLAS-------------KLARNP----HVKDVRGLGL 386 (451)
Q Consensus 338 ~~-----------~~~~t~~~-~~~~~aaa~aal~~~~~~--~~~~~-------------~~~~~~----~~~~v~g~G~ 386 (451)
.. ...++++. +.....+...+|+.+.++ ++... ..+..+ .......+..
T Consensus 220 ~~~p~~ldy~~~~~~~s~~nTPpv~~iy~l~~~l~~i~~e~GGl~~~~~r~~~ka~~ly~~id~~~~~~~~~~~~~~RS~ 299 (364)
T PRK12462 220 DTLPPMLDFRTHVEHRSNYNTPPVFAIYVMALVLRWIRDEIGGVHAMRDINARKAAMLYATLDALNEVIDCHAHRAARST 299 (364)
T ss_pred ccCCchhhHHHHHhcCCCCCCchHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcCc
Confidence 21 12345543 455667777888887555 32211 122222 1111111222
Q ss_pred e-EEEEec--CChHHHHHHHHHCCceeeecCC-CCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q 013008 387 I-IGIEFD--VSATPVVDACRDSGLLVLTAGK-GNVVRLVPPLIISEQELDQAVEILCKTLP 444 (451)
Q Consensus 387 ~-~~~~~~--~~~~~~~~~l~~~Gv~~~~~~~-~~~iri~~~~~~t~e~i~~~l~~l~~~l~ 444 (451)
| +.|.+. ....+|.+.+.++|+.-..++. -+.+|.++=-+++.|+++.+++-+++.-+
T Consensus 300 mnv~f~~~~~~l~~~f~~~a~~~gl~~lkGhr~vgg~Ras~yna~~~e~v~~L~~fm~~f~~ 361 (364)
T PRK12462 300 MNVAFRFRQPRLDTLFKEQSTEAGFCGLSGHRSIGGIRASLYNAVSEQAVSRLCAFLKDFAI 361 (364)
T ss_pred ceEEEEcCCHHHHHHHHHHHHHCCCccccCCcccCceEEEcCCCCCHHHHHHHHHHHHHHHH
Confidence 2 222332 2356788899999998766643 13389988889999999999988887654
No 372
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=98.38 E-value=6.3e-07 Score=88.96 Aligned_cols=160 Identities=21% Similarity=0.262 Sum_probs=96.5
Q ss_pred CHHHHHHHHHHhhccCCCeEE-ecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCC-CCc
Q 013008 139 SIPQIELAKRLVACSFADRVF-FSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK-EHY 216 (451)
Q Consensus 139 ~~~~~~l~~~l~~~~~~e~v~-~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~-~~~ 216 (451)
.....+-.+..++.++.++.+ .+||.|.+|.+++.++.. ++|+||+.. .-|-+...++.+++. +.|
T Consensus 65 ~G~I~eAe~~aA~~fGAd~t~flvnGsT~g~~a~i~a~~~-----------~gd~VLv~R-N~HkSv~~alil~ga~Pvy 132 (417)
T PF01276_consen 65 EGIIKEAEELAARAFGADKTFFLVNGSTSGNQAMIMALCR-----------PGDKVLVDR-NCHKSVYNALILSGAIPVY 132 (417)
T ss_dssp BTHHHHHHHHHHHHHTESEEEEESSHHHHHHHHHHHHHTT-----------TTCEEEEET-T--HHHHHHHHHHTEEEEE
T ss_pred ccHHHHHHHHHHHhcCCCeEEEEecCchHHHHHHHHHhcC-----------CCCEEEEcC-CcHHHHHHHHHHcCCeEEE
Confidence 334667777788889966554 567778888888887662 577766655 557887778777653 333
Q ss_pred CCCCcCCCCCe-eEeeCC--CHHHHHHhcC--CCCeE---EEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEecc
Q 013008 217 RSPFEPVMPGV-NFVEYG--NIEATRKLIQ--PGKTA---AVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEV 288 (451)
Q Consensus 217 ~~~~~~~~~~~-~~~~~~--d~~~le~~l~--~~~~a---avi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv 288 (451)
..+-. ..-++ .-++.. +.+.++++|+ +...+ +||+.|.+ .|.... +++|.++|++++++|++||+
T Consensus 133 i~p~~-~~~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY--~Gv~~d----i~~I~~~~h~~~~~llvDEA 205 (417)
T PF01276_consen 133 IPPED-NEYGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTY--YGVCYD----IKEIAEICHKHGIPLLVDEA 205 (417)
T ss_dssp EEEEE--TTS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-T--TSEEE-----HHHHHHHHCCTECEEEEE-T
T ss_pred ecCCc-cccCCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCCC--CeEEEC----HHHHHHHhcccCCEEEEEcc
Confidence 22110 00111 111111 3488888887 33334 67777753 365666 99999999999999999999
Q ss_pred ccC-CCcccccccccccCCCcc-------eeeec--ccccC
Q 013008 289 QCG-LGRTGYLWAHEHYGIFPD-------IMTLA--KPLAG 319 (451)
Q Consensus 289 ~tg-~gr~G~~~~~~~~~~~pd-------i~t~s--K~lg~ 319 (451)
|.+ |+.. . +.........| +++-| |.+++
T Consensus 206 hGah~~F~-~-lp~~a~~~gad~~~~~~~~vvqS~HKtL~a 244 (417)
T PF01276_consen 206 HGAHFGFH-P-LPRSALALGADRPNDPGIIVVQSTHKTLPA 244 (417)
T ss_dssp T-TTGGCS-G-GGTTCSSTTSS-CTSBEEEEEEEHHHHSSS
T ss_pred ccccccCC-C-CccchhhccCccccccceeeeechhhcccc
Confidence 865 3322 2 22234445566 77777 77763
No 373
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=98.32 E-value=0.00013 Score=77.14 Aligned_cols=276 Identities=12% Similarity=0.117 Sum_probs=146.2
Q ss_pred HHHHHHHHHhhccCCCeEE-ecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccC-CCCcCC
Q 013008 141 PQIELAKRLVACSFADRVF-FSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTS-KEHYRS 218 (451)
Q Consensus 141 ~~~~l~~~l~~~~~~e~v~-~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~-~~~~~~ 218 (451)
...+-.+..++.++.++.+ .+||.|.+|..++.++.. ++|+|| ++...|=+...++.+++ .+.|..
T Consensus 196 ~i~eAe~~aA~~fgAd~tyfvvNGTS~~n~av~~a~~~-----------~Gd~VL-vdRN~HKSv~~aLilsga~PVYl~ 263 (713)
T PRK15399 196 PHLEAEEYIARTFGAEQSYIVTNGTSTSNKIVGMYAAP-----------AGSTLL-IDRNCHKSLAHLLMMSDVVPIWLK 263 (713)
T ss_pred HHHHHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHhcC-----------CCCEEE-eecccHHHHHHHHHHcCCeeEEec
Confidence 3556666677778877655 466678888888887662 466555 56667888777777765 344432
Q ss_pred CCcCCCCCee-EeeCC--CHHHHHHhcCC-CC----eEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEE-EEeccc
Q 013008 219 PFEPVMPGVN-FVEYG--NIEATRKLIQP-GK----TAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALL-VFDEVQ 289 (451)
Q Consensus 219 ~~~~~~~~~~-~~~~~--d~~~le~~l~~-~~----~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~ll-I~DEv~ 289 (451)
+-+. .-++. -++.. +.+.+++.|+. .+ .++||+.|.+ .|.+.. +++|.++| |+.+ ++||+|
T Consensus 264 P~~n-~~Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~pTY--dGi~yd----~~~I~~~~---g~~~ilvDEAh 333 (713)
T PRK15399 264 PTRN-ALGILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNSTY--DGLLYN----TDWIKQTL---DVPSIHFDSAW 333 (713)
T ss_pred cccc-ccCCcCCCChhhccHHHHHHHHHhCCCcCCceEEEEECCCC--CceeeC----HHHHHHHh---CCCEEEEeccc
Confidence 2110 00110 01111 35888888872 12 3677777743 455544 77788887 6776 599998
Q ss_pred cCCCccccc----ccccccCCCccee---eec--ccccCCccc-cccccc-----HHHHhhccCCCccCCCCCcHHHHHH
Q 013008 290 CGLGRTGYL----WAHEHYGIFPDIM---TLA--KPLAGGLPI-GAALVT-----EKVASAINYGDHGSTFAGSPLVCNA 354 (451)
Q Consensus 290 tg~gr~G~~----~~~~~~~~~pdi~---t~s--K~lg~G~~i-G~v~~~-----~~i~~~~~~~~~~~t~~~~~~~~aa 354 (451)
.+.-...+. .+.. .+-.+|.+ |-| |.+++ +.- +++-.+ +.+-+.+. ...|.+.+-+.+|.
T Consensus 334 gah~~F~p~~~~~sam~-~~~~aD~~i~~tQStHKtL~a-lTQaS~iHvk~~vd~~~~n~a~~---m~~STSPsY~LmAS 408 (713)
T PRK15399 334 VPYTHFHPIYQGKSGMS-GERVPGKVIFETQSTHKMLAA-FSQASLIHIKGEYDEETFNEAFM---MHTSTSPSYPIVAS 408 (713)
T ss_pred hhhhhcCcccCCcChhh-CCCCCCeeeeeeeehhccccc-cchheeeeecCCCCHHHHHHHHH---HHcCCCcHHHHHHH
Confidence 653222221 1111 11146766 444 77753 222 233222 22222221 12233444333444
Q ss_pred HHHHHHHhcC---hHHHHH----------HHhCCCC------cceecc-----------------cc-------e-----
Q 013008 355 AIAVLDKISN---PAFLAS----------KLARNPH------VKDVRG-----------------LG-------L----- 386 (451)
Q Consensus 355 a~aal~~~~~---~~~~~~----------~~~~~~~------~~~v~g-----------------~G-------~----- 386 (451)
.-.+...++. ..+.++ .+.+... +..... .| .
T Consensus 409 LD~a~~~m~~~~G~~l~~~~i~~a~~fR~~l~~~~~~~~~w~f~~~~~~~~~~~~~w~l~p~~~whgf~~~~~~~~~lDP 488 (713)
T PRK15399 409 VETAAAMLRGNPGKRLINRSVERALHFRKEVQRLREESDGWFFDIWQPENVDEAECWPVAPGEQWHGFKDADADHMFLDP 488 (713)
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhccccccCceeeecCccccCCccceecCCCcccccccccccccccCCC
Confidence 4444444432 222222 1111111 000000 00 0
Q ss_pred -eEEEEe------------cCChHHHHHHHHHCCceeeecCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q 013008 387 -IIGIEF------------DVSATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTLP 444 (451)
Q Consensus 387 -~~~~~~------------~~~~~~~~~~l~~~Gv~~~~~~~~~~iri~~~~~~t~e~i~~~l~~l~~~l~ 444 (451)
-+.+.. ...+..+.+.|.++||.+--.+. +.+-+.++...|+++++.+++.|.+.-+
T Consensus 489 ~KltI~t~g~~~~g~~~~~Gi~g~~l~~~L~e~gI~~E~~d~-~~vL~l~s~g~t~~~~~~L~~aL~~f~~ 558 (713)
T PRK15399 489 VKVTILTPGMDEQGNMSEEGIPAALVAKFLDERGIVVEKTGP-YNLLFLFSIGIDKTKAMGLLRGLTEFKR 558 (713)
T ss_pred ceEEEEecCcccccccccCCCCHHHHHHHHHHcCCEEEecCC-CeEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence 001111 12355788889899999887765 5666777889999999999999887643
No 374
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=98.32 E-value=0.00014 Score=76.99 Aligned_cols=278 Identities=14% Similarity=0.139 Sum_probs=148.5
Q ss_pred HHHHHHHHHHhhccCCCeEEe-cCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCC-CCcC
Q 013008 140 IPQIELAKRLVACSFADRVFF-SNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK-EHYR 217 (451)
Q Consensus 140 ~~~~~l~~~l~~~~~~e~v~~-~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~-~~~~ 217 (451)
....+..+..++.++.++.+| +||.|.+|..++.++.. ++|+|| ++...|=+...++.+++. +.|.
T Consensus 195 G~i~eAe~~AA~~fgAd~tyfvvNGTS~~n~av~~a~~~-----------~Gd~VL-vdRN~HKSv~haLilsga~PVYl 262 (714)
T PRK15400 195 GPHKEAEEYIARVFNADRSYMVTNGTSTANKIVGMYSAP-----------AGSTVL-IDRNCHKSLTHLMMMSDVTPIYF 262 (714)
T ss_pred hHHHHHHHHHHHHhCCCcEEEEeCchHHHHHHHHHHhcC-----------CCCEEE-eecccHHHHHHHHHHcCCeEEEe
Confidence 335566666777788776554 66668888888776652 455555 666778888778777753 4443
Q ss_pred CCCcCCCCCee-EeeCC--CHHHHHHhcCCC-C----eEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccc
Q 013008 218 SPFEPVMPGVN-FVEYG--NIEATRKLIQPG-K----TAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQ 289 (451)
Q Consensus 218 ~~~~~~~~~~~-~~~~~--d~~~le~~l~~~-~----~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~ 289 (451)
.+-+. .-++. -++.. +.+.+++.|+.. + .++||+.|.+ .|.+.. ++.|.++|+.++ |++||+|
T Consensus 263 ~P~rn-~~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~pTY--dG~~yd----~~~I~~~~~~~~--ilvDEAw 333 (714)
T PRK15400 263 RPTRN-AYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNSTY--DGLLYN----TDFIKKTLDVKS--IHFDSAW 333 (714)
T ss_pred ccccc-ccCCccCCCccccCHHHHHHHHHhCccccCccEEEEECCCC--ccEecC----HHHHHHHhCCCC--EEEEccc
Confidence 22110 00110 11111 478999988721 1 2477777743 455554 788999998887 6899998
Q ss_pred cCCCcccccc----cccccCCCc-c--eeeec--ccccCCccc-ccccc----c-HHHHhhccCCCccCCCCCcHHHHHH
Q 013008 290 CGLGRTGYLW----AHEHYGIFP-D--IMTLA--KPLAGGLPI-GAALV----T-EKVASAINYGDHGSTFAGSPLVCNA 354 (451)
Q Consensus 290 tg~gr~G~~~----~~~~~~~~p-d--i~t~s--K~lg~G~~i-G~v~~----~-~~i~~~~~~~~~~~t~~~~~~~~aa 354 (451)
.+.-.....+ +.. .+-.+ | ++|-| |.+++ +.- +++-. + +.+.+.+. . ..|.+.+-+.+|.
T Consensus 334 gah~~F~p~~~~~sam~-~ga~~~~~i~vtQStHKtL~a-lTQaS~LHvkg~vd~~~~n~a~~--m-~~STSPsY~l~AS 408 (714)
T PRK15400 334 VPYTNFSPIYEGKCGMS-GGRVEGKVIYETQSTHKLLAA-FSQASMIHVKGDVNEETFNEAYM--M-HTTTSPHYGIVAS 408 (714)
T ss_pred hhhhccCcccCCcChhh-cCCCCCCceEEEEchhhcccc-hhHHhHHHHcCCCCHHHHHHHHH--H-HcCCCcHHHHHHH
Confidence 6532222211 111 12111 4 56655 77653 222 22212 2 22222222 1 2233444333444
Q ss_pred HHHHHHHhcC---hHHHHH----------HHhCCCC------cceeccc-----------------ce--------e---
Q 013008 355 AIAVLDKISN---PAFLAS----------KLARNPH------VKDVRGL-----------------GL--------I--- 387 (451)
Q Consensus 355 a~aal~~~~~---~~~~~~----------~~~~~~~------~~~v~g~-----------------G~--------~--- 387 (451)
.-.+...++. ..+.++ .+.+++. +...... |+ +
T Consensus 409 LD~a~~~m~~~~G~~l~~~~i~~a~~~R~~l~~~~~~~~~w~~~~~~~~~~~~~~~w~~~p~~~whgf~~~~~~~~~lDP 488 (714)
T PRK15400 409 TETAAAMMKGNAGKRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDP 488 (714)
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhCCCcccCceEEecChhhcccchhcccCccccccCcccccccccccCC
Confidence 4444444432 222222 1112211 1111000 00 0
Q ss_pred --EEEEe------------cCChHHHHHHHHHCCceeeecCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q 013008 388 --IGIEF------------DVSATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTLP 444 (451)
Q Consensus 388 --~~~~~------------~~~~~~~~~~l~~~Gv~~~~~~~~~~iri~~~~~~t~e~i~~~l~~l~~~l~ 444 (451)
+.+.. ...+..+.+.|.++||.+--.+. +.+-+.++...|+++++.+++.|.+.-+
T Consensus 489 ~Klti~tpgi~~~g~~~~~Gipg~~v~~~L~e~gI~~E~~d~-~~iLfl~s~g~t~~~~~~L~~aL~~f~~ 558 (714)
T PRK15400 489 IKVTLLTPGMKKDGTMSDFGIPASIVAKYLDEHGIVVEKTGP-YNLLFLFSIGIDKTKALSLLRALTDFKR 558 (714)
T ss_pred ceEEEEeCCCCCCccccccCCCHHHHHHHHHHcCCEEEecCC-CeEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence 01111 02355678888899999887765 5666777889999999999999887633
No 375
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=98.31 E-value=0.00027 Score=68.85 Aligned_cols=269 Identities=16% Similarity=0.167 Sum_probs=143.8
Q ss_pred HHHHHHhhccCCC--eEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCc
Q 013008 144 ELAKRLVACSFAD--RVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFE 221 (451)
Q Consensus 144 ~l~~~l~~~~~~e--~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~ 221 (451)
++-..++++.+++ +.-....+|.+-|+++.+-| .++ .+++++++.. .-|..+...+..- -.
T Consensus 124 efQtlv~dLTGm~VANASm~DeaTAaAEAm~ma~r-~~k-------~k~~~~~V~~-~vhpqt~~Vl~Tr--------a~ 186 (450)
T COG0403 124 EFQTLVADLTGLDVANASMLDEATAAAEAMLMAKR-VTK-------KKRNKFLVPK-DVHPQTLDVLRTR--------AE 186 (450)
T ss_pred HHHHHHHHHhCCCcccchhhhhHHHHHHHHHHHHH-hhc-------CcCceEEecC-CCCHHHHHHHHhh--------cc
Confidence 4445566777743 45555656655555444333 332 1245666655 4456655544321 12
Q ss_pred CCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEE--eccccCCCcccccc
Q 013008 222 PVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVF--DEVQCGLGRTGYLW 299 (451)
Q Consensus 222 ~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~--DEv~tg~gr~G~~~ 299 (451)
+..-.+...+++|++.|++. ...++.+++++-++.-|..... +++|.+.++++|+++|+ |=+--++ .-+
T Consensus 187 ~~g~~i~~~~~~d~~~l~~~-~~~~~~gv~vQyP~~~G~~~~d----~~~l~~~~h~~~al~~v~aDplaL~L--L~p-- 257 (450)
T COG0403 187 GLGIEIEVVDADDLDDLESA-DDGDVFGVLVQYPNTFGIVEED----LRALIEAAHSAGALVIVAADPLALGL--LKP-- 257 (450)
T ss_pred cCceEEEEeccchhhhhhhc-cccCeEEEEEecCCCCCccchh----HHHHHHHHhhcCCEEEEEechhHhhc--cCC--
Confidence 33345566777899999998 6568899999877655433333 99999999999998874 3222221 111
Q ss_pred cccccCCCcceee-----eccccc-CCcccccccccHHHHhhccCC----------------------------CccCCC
Q 013008 300 AHEHYGIFPDIMT-----LAKPLA-GGLPIGAALVTEKVASAINYG----------------------------DHGSTF 345 (451)
Q Consensus 300 ~~~~~~~~pdi~t-----~sK~lg-~G~~iG~v~~~~~i~~~~~~~----------------------------~~~~t~ 345 (451)
...+ ..||++ ||=.++ ||--.|++.++++++..+... ...+..
T Consensus 258 -PGe~--GADIvvG~~QrfGvPmgfGGPhag~fA~~~~~~R~mPGRlVG~S~D~~G~~A~rLaLQTREQHIRReKATSNI 334 (450)
T COG0403 258 -PGEF--GADIVVGSAQRFGVPMGFGGPHAGYFAVKDEFKRQMPGRLVGVSVDAAGKRAFRLALQTREQHIRREKATSNI 334 (450)
T ss_pred -cccc--CCceEEecCcccCCCcCCCCcceeeeeEhHhHhhcCCCceeeeeecCCCCchhhhhHHHHHHHHhhhccchhh
Confidence 1122 245553 555555 456667888888876554211 011222
Q ss_pred CCcHHHHHHHHHHHHHhcC-hHHHHH----------HHhCCC---CcceecccceeEEEEe--c-CChHHHHHHHHHCCc
Q 013008 346 AGSPLVCNAAIAVLDKISN-PAFLAS----------KLARNP---HVKDVRGLGLIIGIEF--D-VSATPVVDACRDSGL 408 (451)
Q Consensus 346 ~~~~~~~aaa~aal~~~~~-~~~~~~----------~~~~~~---~~~~v~g~G~~~~~~~--~-~~~~~~~~~l~~~Gv 408 (451)
+.|..-+|.+.+..-.+.. .++.+- +++++. ....+...-+|-.+.+ + .....+.++....|+
T Consensus 335 CTnQaLlA~~As~y~~~hGp~GLk~iA~r~~~~a~~la~~L~~~~~g~~~~~~~fFdt~~v~~~~~~~~~l~~~~~~~G~ 414 (450)
T COG0403 335 CTNQALLALAASMYAVYHGPQGLKEIAERIHRLAAYLAAGLKEIGAGVELVFDHFFDTFTVRVPEEVAEALLAAAIAGGI 414 (450)
T ss_pred hHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhcCCceEeccccceeeEEEecchhHHHHHHHHHHhcCC
Confidence 3232222211111111122 222211 222222 1111111223322333 2 234455666667788
Q ss_pred eeeecCCCCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 013008 409 LVLTAGKGNVVRLVPPLIISEQELDQAVEILCKT 442 (451)
Q Consensus 409 ~~~~~~~~~~iri~~~~~~t~e~i~~~l~~l~~~ 442 (451)
.+..... ..+-++..-.+|+++|+.+++.+...
T Consensus 415 ~L~~~~~-~~~~ia~tEt~t~~~i~~l~~~~~~~ 447 (450)
T COG0403 415 NLRRVDA-DTVLIALTETTTKEDIDALVAAFGGV 447 (450)
T ss_pred ceeeecC-CceEEEeecccCHHHHHHHHHHHhhh
Confidence 8876554 46778888889999999999888764
No 376
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=98.18 E-value=0.00073 Score=73.67 Aligned_cols=264 Identities=12% Similarity=0.082 Sum_probs=142.9
Q ss_pred HHHHHHHHhhccCCC--eEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCC
Q 013008 142 QIELAKRLVACSFAD--RVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSP 219 (451)
Q Consensus 142 ~~~l~~~l~~~~~~e--~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~ 219 (451)
..++...++++.|++ ++-+..+++.+-++++.+.+. ++ .++++|++.+..+ ..+...+....
T Consensus 111 l~e~Qt~i~eLtGm~~aNaSl~d~atA~aEa~~~a~~~-~~-------~~~~~vlv~~~~h-P~~~~v~~t~a------- 174 (939)
T TIGR00461 111 LLNFQTVVSDLTGLPVANASLLDEGTAAAEAMALSFNV-SK-------KKANKFFVAKDLH-PQTKSVLHTRA------- 174 (939)
T ss_pred HHHHHHHHHHHHCCChhhhhccchhhHHHHHHHHHHHh-hc-------CCCCEEEECCCCC-cchHHHHHHHH-------
Confidence 446777788888866 557888888887755554332 21 0246777766554 55443322110
Q ss_pred CcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccc
Q 013008 220 FEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLW 299 (451)
Q Consensus 220 ~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~ 299 (451)
.+..-.++.+ |+++|++.+ +++++++.-. +..|.+.. +++|.++++++|+++|++--...++..-
T Consensus 175 -~~~g~~v~~~---~~~~l~~~~---~~~~v~~q~P-n~~G~ied----~~~i~~~~h~~gal~~~~ad~~al~ll~--- 239 (939)
T TIGR00461 175 -KPFGIEVIVV---DCSDIKKAV---DVFGCLLQYP-ATDGSILD----YKQLIDALHSHKSLVSVAADLMALTLLT--- 239 (939)
T ss_pred -HhcCcEEEEE---cHHHHhhcC---CEEEEEEECC-CCCeEEec----HHHHHHHHHHcCCEEEEEechHHhCCcC---
Confidence 1111223333 566777665 4666665433 34455554 9999999999999999864433221111
Q ss_pred cccccCCCcceee-eccccc-----CCcccccccccHHHHhhccCCC----------------------c------cCCC
Q 013008 300 AHEHYGIFPDIMT-LAKPLA-----GGLPIGAALVTEKVASAINYGD----------------------H------GSTF 345 (451)
Q Consensus 300 ~~~~~~~~pdi~t-~sK~lg-----~G~~iG~v~~~~~i~~~~~~~~----------------------~------~~t~ 345 (451)
....+ ..||++ .+|.|| ||--.|++.+++++...+.... | .+..
T Consensus 240 ~Pge~--GaDi~vg~~q~fg~p~g~GGP~aG~~a~~~~l~r~lPgrivG~s~D~~G~~~~~l~LqtReqhIrRekAtSNI 317 (939)
T TIGR00461 240 PPGHY--GADIVLGSSQRFGVPMGYGGPHAAFFAVKDEYNRKMPGRIVGVSKDALGNTALRLALQTREQHIRRDKATSNI 317 (939)
T ss_pred CHHHc--CCcEEeeCCCccCCCCCCCCCceeeeeecHhhHhhCCCCceeEEecCCCCccceeecccccccccccccCcch
Confidence 11122 356652 335443 2444778888888776653210 0 0111
Q ss_pred CCcHHHHH-HHHHHHHHhcChHHHH---H-------HHhCC--CCcceecccceeEEE--Eec-CChHHHHHHHHHCCce
Q 013008 346 AGSPLVCN-AAIAVLDKISNPAFLA---S-------KLARN--PHVKDVRGLGLIIGI--EFD-VSATPVVDACRDSGLL 409 (451)
Q Consensus 346 ~~~~~~~a-aa~aal~~~~~~~~~~---~-------~~~~~--~~~~~v~g~G~~~~~--~~~-~~~~~~~~~l~~~Gv~ 409 (451)
+.+...++ ++..-+..+-.+++.+ + +.+.+ ..+..+.. -.|-.+ .+. .++.++.+++.++||.
T Consensus 318 Ct~qaL~a~~a~~Y~~~~G~~GL~~iA~~~~~~a~~l~~~L~~~G~~~~~~-~fF~~~~v~~~~~~~~~i~~~~~~~gi~ 396 (939)
T TIGR00461 318 CTAQVLLANVASSYCVYHGPKGLKNIARRIHSLTSILANGLENDPHELINK-TWFDTLTVKVGNGISSELLKAAEEFNIN 396 (939)
T ss_pred hHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCC-CccceEEEEeCCCCHHHHHHHHHHCCCe
Confidence 11111111 1111123333333322 1 11111 12221211 122122 232 3578899999999999
Q ss_pred eeecCCCCEEEEeCCCCCCHHHHHHHHHHHH
Q 013008 410 VLTAGKGNVVRLVPPLIISEQELDQAVEILC 440 (451)
Q Consensus 410 ~~~~~~~~~iri~~~~~~t~e~i~~~l~~l~ 440 (451)
+..... +.+++++.-.+|++||+.+++.+.
T Consensus 397 l~~~~~-~~i~~s~~E~~t~~di~~l~~~~~ 426 (939)
T TIGR00461 397 LRAVDT-TTVGIALDETTTKADVENLLKVFD 426 (939)
T ss_pred eeecCC-CEEEEEeecCCCHHHHHHHHHHhc
Confidence 876544 689999999999999999999994
No 377
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=98.09 E-value=0.00037 Score=69.51 Aligned_cols=164 Identities=21% Similarity=0.245 Sum_probs=84.5
Q ss_pred HHHHHHHHhhccCCCeE--EecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCC
Q 013008 142 QIELAKRLVACSFADRV--FFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSP 219 (451)
Q Consensus 142 ~~~l~~~l~~~~~~e~v--~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~ 219 (451)
..++...++++.+.|-+ -+..+++.+-++++.+.+ .++. .+++|++.+. -|+.+...+....
T Consensus 112 lfe~Qs~i~eLTGmdvaNaSlyd~atA~aEa~~ma~r-~~~~-------~~~~vlv~~~-~hP~~~~v~~t~a------- 175 (429)
T PF02347_consen 112 LFEYQSMICELTGMDVANASLYDGATAAAEAMLMAVR-ATKR-------KRNKVLVPES-LHPQTRAVLRTYA------- 175 (429)
T ss_dssp HHHHHHHHHHHHTSSEE-SEBSSCCHHHHHHHHHHHH-HHTT----------EEEEETT-S-CHHHHHHHHHC-------
T ss_pred HHHHHHHHHHhhCCCccCCCCCChhHHHHHHHHHHHH-hccc-------CCcEEEEcCC-cChhhHHHHHHhh-------
Confidence 55788889999998753 566666666665544444 3331 2456777665 4565544333211
Q ss_pred CcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccc
Q 013008 220 FEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLW 299 (451)
Q Consensus 220 ~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~ 299 (451)
.+..-.+..++.++-.. .+++++++|++...+.- |.+-. +++|.++++++|+++|+ -+ ..--.+-.-
T Consensus 176 -~~~g~~iv~~~~~~~~~----~d~~~~a~v~vq~Pn~~-G~~ed----~~~i~~~~h~~gal~~~-~a--d~~aL~~l~ 242 (429)
T PF02347_consen 176 -APLGIEIVEVPLDEDGT----TDDDDTAAVMVQNPNTF-GVFED----IKEIADIAHAAGALVIV-GA--DPNALGGLK 242 (429)
T ss_dssp -CHCCEEEEEE-BBTTCS----B-STTEEEEEEESS-TT-SB--T----HHHHHHHHHHTT-EEEE-CG--GCCGCCTC-
T ss_pred -hhCCeEEEEecccccCC----ccccCeEEEEeecCCCC-ceEee----HHHHHHHHHHcCCEEEE-ec--CHHHHhCcC
Confidence 11122334444322110 01568999998876544 44433 99999999999999987 33 211111111
Q ss_pred cccccCCCcceee-eccccc-----CCcccccccccHHHHhhc
Q 013008 300 AHEHYGIFPDIMT-LAKPLA-----GGLPIGAALVTEKVASAI 336 (451)
Q Consensus 300 ~~~~~~~~pdi~t-~sK~lg-----~G~~iG~v~~~~~i~~~~ 336 (451)
....+| .||++ .+|.|| ||--.|++.++++++..+
T Consensus 243 ~Pge~G--ADI~vg~~Q~fg~p~~~GGP~~G~~a~~~~l~r~l 283 (429)
T PF02347_consen 243 SPGEYG--ADIVVGEHQTFGIPMGFGGPGAGFFAVREDLVRQL 283 (429)
T ss_dssp -GGGGT---SEEEECCTTTT---CCC-S--EEEEE-GGGGGGS
T ss_pred ChhhcC--ccEEeeCCCCCcccCCCCCCCeeeEEEhhhhhhhC
Confidence 122333 56662 356654 246678888888877765
No 378
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=97.83 E-value=0.00018 Score=75.39 Aligned_cols=40 Identities=20% Similarity=0.136 Sum_probs=32.8
Q ss_pred CHHHHHHHHHHhhccCC--CeEEecCCHHHHHHHHHHHHHHH
Q 013008 139 SIPQIELAKRLVACSFA--DRVFFSNTGTEANEAAIKFARKF 178 (451)
Q Consensus 139 ~~~~~~l~~~l~~~~~~--e~v~~~~sG~eA~~~al~~a~~~ 178 (451)
+....++.++|++.+|. .+-.||+|||+||..|+.+||..
T Consensus 122 t~lE~~vi~~la~l~G~~~~~G~~TsGGT~ANl~aL~~AR~~ 163 (608)
T TIGR03811 122 SQMEEEVGKEFATLMGYKNGWGHIVADGSLANLEGLWYARNI 163 (608)
T ss_pred HHHHHHHHHHHHHHhCCCCCCeEEeCChHHHHHHHHHHHHHh
Confidence 34477888899999873 35679999999999999999864
No 379
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=97.78 E-value=0.0049 Score=60.82 Aligned_cols=318 Identities=17% Similarity=0.106 Sum_probs=159.8
Q ss_pred CHHHHHHHHHHHhhcccc-c--CCCCCHHHHHHHHHHhhccC---CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCC
Q 013008 116 DADWIKAVVDQANVLTHV-S--NMYYSIPQIELAKRLVACSF---ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEP 189 (451)
Q Consensus 116 ~p~v~~a~~~~~~~~~~~-~--~~~~~~~~~~l~~~l~~~~~---~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~ 189 (451)
+|+..+-+.+...++... . +........+....++..+. .+.-.-|.||+|++..+.+.-+.+.....+. .
T Consensus 93 ~~~~~~l~~~~~~k~N~l~~d~fp~~~~~e~~~Vnm~~~L~~~~~~~~g~~t~G~Ses~l~~~k~~~~~r~~~k~I---~ 169 (491)
T KOG1383|consen 93 EPELDKLIMEAYNKFNPLHPDEFPVVRKLEAECVNMIANLFNAPSDSCGCGTVGGSESGLAAKKSYRNRRKAQKGI---D 169 (491)
T ss_pred CcchhhHHHHHHhhcCccCccccchhHHHHHHHHHHHHHHhcCCccccCccccccchHHHHHHHHHHHHHHhccCC---C
Confidence 555555555555553111 1 11222335566667777764 2334567889999888887554332211111 1
Q ss_pred CceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHH
Q 013008 190 ATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFL 269 (451)
Q Consensus 190 ~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l 269 (451)
+..|++... -|....-+...-+- .-...++.++...+ |+..+.+.++. ++.+++.+-.+-+.|.+-+ .
T Consensus 170 ~p~iv~~~~-v~~a~eK~a~yf~v---~l~~V~~~~~~~~~---D~~k~~~~i~e-Nti~lv~~~~~~p~G~~e~----v 237 (491)
T KOG1383|consen 170 KPNIVTPQN-VHAAFEKAARYFEV---ELREVPLDEGDYRV---DPGKVVRMIDE-NTIMLVGSLPNFPTGEIED----V 237 (491)
T ss_pred CccccchHH-HHHHHHHHHhhEEE---EEEeeeccccceEe---cHHHHHHHhcc-ceEEEEEEcCCCCccchhh----H
Confidence 333444321 12211111110000 00012333322222 78999999876 4555555544444454444 8
Q ss_pred HHHHHHHHH-hCCEEEEeccccCCCcc-cccccccccCC----Ccceeeec-c-cccCCccccccccc-HHHH-hhcc--
Q 013008 270 QFLRDACDD-AGALLVFDEVQCGLGRT-GYLWAHEHYGI----FPDIMTLA-K-PLAGGLPIGAALVT-EKVA-SAIN-- 337 (451)
Q Consensus 270 ~~l~~l~~~-~g~llI~DEv~tg~gr~-G~~~~~~~~~~----~pdi~t~s-K-~lg~G~~iG~v~~~-~~i~-~~~~-- 337 (451)
++|.++.-+ +++++.+|-.-.||-.. +.. ....+++ ++-+.+-+ | +|.. -.+++++-+ +++. +.+.
T Consensus 238 e~l~~l~~e~w~ipiHvDa~~GgFi~p~~~~-~~~~fdFr~p~V~Sisa~~HKYGl~~-~G~~~vl~r~k~~~~~q~~~~ 315 (491)
T KOG1383|consen 238 EKLADLLLEIWDIPIHVDACLGGFINPAGYL-NEEEFDFRVPGVTSISADGHKYGLAP-AGSSWVLYRNKELLPHQLFFH 315 (491)
T ss_pred HHHHHHHHHHhCCceeecccCcccccccccc-CccccccCCCCceeEeeccceeeeee-cCcEEEEEcccccccceEEEe
Confidence 999999988 99999999998777433 221 1223333 22233333 2 2321 124565533 3322 2221
Q ss_pred C---C--CccCCCCCc--HHHHHHHHHHHHHhcChHHHHH----------HHhCCCCccee--cccceeEEEEec---CC
Q 013008 338 Y---G--DHGSTFAGS--PLVCNAAIAVLDKISNPAFLAS----------KLARNPHVKDV--RGLGLIIGIEFD---VS 395 (451)
Q Consensus 338 ~---~--~~~~t~~~~--~~~~aaa~aal~~~~~~~~~~~----------~~~~~~~~~~v--~g~G~~~~~~~~---~~ 395 (451)
. + .-+.|.+++ ..-.++..+++=.+-.+++.++ +.+.+..+..+ -+.-.+-.+-++ .+
T Consensus 316 ~~w~Gg~y~s~TlngSR~g~~va~~wa~~~~lG~eGY~~~~~~ive~~~~l~egie~i~~i~i~gkp~vs~~~~~s~~~~ 395 (491)
T KOG1383|consen 316 TDWLGGIYASPTLNGSRPGSQVAAQWAALMSLGEEGYRENTQNIVETARKLREGIENIKGIKIVGKPLVSFILFGSNDVN 395 (491)
T ss_pred ccccCccccCcccccCCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhhccccceecCCCcEEEEEccCCccc
Confidence 1 1 122333333 2234455555555555666655 33332222221 222222222222 33
Q ss_pred hHHHHHHHHHCCceeeecCCCCEEEEeCCCCCCHHH-HHHHHHHHHHHHHHHhhcC
Q 013008 396 ATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQE-LDQAVEILCKTLPVLDSNS 450 (451)
Q Consensus 396 ~~~~~~~l~~~Gv~~~~~~~~~~iri~~~~~~t~e~-i~~~l~~l~~~l~~~~~~~ 450 (451)
-.++.+.|.+.|..+..-..+..+.+++...+..++ .++++.-|++++++++.+|
T Consensus 396 i~elsd~l~~~GW~lnalq~P~a~Hi~vt~~~~~~~~A~~~v~Di~~~~~el~~~p 451 (491)
T KOG1383|consen 396 IFELSDLLRKKGWILNALQFPAAIHICVTRVHAREDVADRFVADIRKVVEELKSLP 451 (491)
T ss_pred hhhhhHHHHhcCcCccccCCCCceEEEEEeeeccHHHHHHHHHHHHHHHHHHHhCC
Confidence 456788899999877643333445666566666665 5788899999999998776
No 380
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=97.78 E-value=0.0024 Score=65.30 Aligned_cols=158 Identities=21% Similarity=0.204 Sum_probs=95.8
Q ss_pred HHHHHHHHHhhccCCC-eEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCC-CCcCC
Q 013008 141 PQIELAKRLVACSFAD-RVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK-EHYRS 218 (451)
Q Consensus 141 ~~~~l~~~l~~~~~~e-~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~-~~~~~ 218 (451)
+..+..+..++.++.+ ..+.+||.+.||...+..+.. +||+||+. ...|=+...++.++|. +.|..
T Consensus 71 ~i~eAqe~aA~~fgAd~tyFvvNGTS~ank~vi~a~~~-----------~GD~VLvd-RN~HKSi~~glilaGa~Pvyl~ 138 (557)
T COG1982 71 PIKEAQELAARVFGADHTYFVVNGTSTANKAVINAVLT-----------PGDKVLVD-RNCHKSIHHGLILAGATPVYLE 138 (557)
T ss_pred cHHHHHHHHHHHhCCCceEEEECCccHHHHHHHHhhcC-----------CCCEEEec-CCccHHHHHHHHHcCCceEEec
Confidence 3566667777778877 455678888888888886662 56766655 4557777666666653 33332
Q ss_pred CCcCCCCCeeEeeCCCHHHHHHhcCCC--C-eEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccC-CCc
Q 013008 219 PFEPVMPGVNFVEYGNIEATRKLIQPG--K-TAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCG-LGR 294 (451)
Q Consensus 219 ~~~~~~~~~~~~~~~d~~~le~~l~~~--~-~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg-~gr 294 (451)
+.. .+.+-++--=+.+.+++.+..+ . ..+|+..|.+ .|.... +++|.+++.++++++..||.+-- ++.
T Consensus 139 p~~--np~~gi~ggI~~~~~~~~l~~~~~~~k~~vitnpTY--dGv~~n----~~~i~~~~~~~~a~v~~deah~~~~~~ 210 (557)
T COG1982 139 PSR--NPLYGIIGGIPLETFKEALLAHPDAEKLAVITNPTY--DGVCYN----LRKIVELLHHYGAWVLYDEAHPAHFDF 210 (557)
T ss_pred CCC--CccccccCCCCHHHHHHHHHhChhhheeEEEecCcc--ceEeec----HHHHHHHHhhcCceEEhhhcCcccccc
Confidence 211 1111111111678888777532 2 4577777643 355555 89999999999999999999832 333
Q ss_pred ccccccccccCCCcceeeec--ccccC
Q 013008 295 TGYLWAHEHYGIFPDIMTLA--KPLAG 319 (451)
Q Consensus 295 ~G~~~~~~~~~~~pdi~t~s--K~lg~ 319 (451)
.+.... .......|++|-| |.+++
T Consensus 211 ~~~l~~-~~~~~~~~~~tqS~HK~l~a 236 (557)
T COG1982 211 SPMLPE-SALNGGADFVTQSTHKLLAA 236 (557)
T ss_pred cccCcc-hhhhcCceEEEechhhhhhh
Confidence 332211 1222346777777 55554
No 381
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=97.75 E-value=0.0089 Score=55.89 Aligned_cols=314 Identities=18% Similarity=0.182 Sum_probs=173.3
Q ss_pred cCCCCCHHHHHHHHHHHhhcc------ccc----CCCCCHHHHHHHHHHhhccC--CCeEEecCCHHHHHHHHHHHHHHH
Q 013008 111 ALGHGDADWIKAVVDQANVLT------HVS----NMYYSIPQIELAKRLVACSF--ADRVFFSNTGTEANEAAIKFARKF 178 (451)
Q Consensus 111 ~lG~~~p~v~~a~~~~~~~~~------~~~----~~~~~~~~~~l~~~l~~~~~--~e~v~~~~sG~eA~~~al~~a~~~ 178 (451)
+||.-+..+.+.+.+.++++. |.. +....++ ....++...| .+.|-++||=+--+...+-..-+.
T Consensus 75 SLGLmPK~t~~~~~~eLDkWak~av~gH~~GkvPW~~~De~---il~l~~~iVGA~e~EvavmNsLTvNlh~Ll~sFyKP 151 (465)
T KOG3846|consen 75 SLGLMPKSTRNSINAELDKWAKCAVEGHFKGKVPWVSIDEP---ILPLLAPIVGAQENEVAVMNSLTVNLHSLLISFYKP 151 (465)
T ss_pred ccccCchhhHhHHHHHHHHHHhhhhhcccccccceeecchh---hhhhhhhhccCCchhhhhHhhhhhHHHHHHHHhcCC
Confidence 489888888888888887642 211 1112222 3334445555 456777887554444433322222
Q ss_pred hhhcCCCCCCCCceEEEEcCCccCChhhhhh---ccCCCCcCCC---CcCCCCCeeEeeCCCHHHHHHhcC--CCCeEEE
Q 013008 179 QRHSNPDSKEPATEFVSFTNSFHGRTMGALA---LTSKEHYRSP---FEPVMPGVNFVEYGNIEATRKLIQ--PGKTAAV 250 (451)
Q Consensus 179 ~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~---~~~~~~~~~~---~~~~~~~~~~~~~~d~~~le~~l~--~~~~aav 250 (451)
| +.|-+|+.-..+|..-....-+ +.|... ... ..|.. +-..+ ..+++-+.|+ .+.+|.|
T Consensus 152 T--------ekR~KILlE~kaFPSDhYAiesQ~~lhG~~~-e~sm~~iePRE-GEetl---RteDILd~IEkngDeiA~v 218 (465)
T KOG3846|consen 152 T--------EKRFKILLEKKAFPSDHYAIESQCKLHGISP-ENSMIQIEPRE-GEETL---RTEDILDTIEKNGDEIALV 218 (465)
T ss_pred c--------chhhhhhhccCCCCchHHHHHhhhhhcCCCh-HHheEEecccc-cccch---hHHHHHHHHHhcCCeEEEE
Confidence 2 2577888888887654333221 112110 000 01111 11111 2344444454 5689999
Q ss_pred EEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccccccCCCcceeeecccccCC-ccccccccc
Q 013008 251 FVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAGG-LPIGAALVT 329 (451)
Q Consensus 251 i~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~t~sK~lg~G-~~iG~v~~~ 329 (451)
++..++--+|-... +.+|...-+.-|+++=+|=+|. +|.. ..-...+|+..-.-|-=|.+..| =.+|.+...
T Consensus 219 ~fSGvqyYTGQ~Fd----i~aIT~Agq~kgc~VGfDLAHA-vgNV--pL~LHdWgVDFACWCSYKYlnaGaGgIgGlFvH 291 (465)
T KOG3846|consen 219 CFSGVQYYTGQYFD----IGAITFAGQFKGCLVGFDLAHA-VGNV--PLQLHDWGVDFACWCSYKYLNAGAGGIGGLFVH 291 (465)
T ss_pred Eeecceeecccccc----hhhhhhcccCCCcEechhhhhh-hcCC--ceEEeecCCceEEEeeecccccCCCccceeeee
Confidence 99999888887666 7777765566799999998885 5432 11222345433333444777533 233333322
Q ss_pred HH----HHhhcc--------------------CCCccCCCCCcHH-HHHHHHHHHHHhcC---hHHHHH----------H
Q 013008 330 EK----VASAIN--------------------YGDHGSTFAGSPL-VCNAAIAVLDKISN---PAFLAS----------K 371 (451)
Q Consensus 330 ~~----i~~~~~--------------------~~~~~~t~~~~~~-~~aaa~aal~~~~~---~~~~~~----------~ 371 (451)
+. ...++. ++..+...+.+|+ ..+|.++.|++... .++..+ +
T Consensus 292 ekh~~~~~prl~GWwgh~~s~RF~Mdnvl~lipGa~GfRiSNPpi~~v~al~~SLe~F~q~~~~~lRkrS~lLTgYleyL 371 (465)
T KOG3846|consen 292 EKHTKESLPRLAGWWGHDPSKRFQMDNVLELIPGALGFRISNPPIIDVVALRSSLELFAQFNINELRKRSLLLTGYLEYL 371 (465)
T ss_pred hhhhcchhhHHhhhccCCcchhhhhccccccCccccccccCCCcHhHHHHHHhhHHHHHHhhHHHHhhhhhhHHhHHHHH
Confidence 21 111111 1112333344443 34455566665433 222222 1
Q ss_pred Hh-----CCC------Cc-----ceecccceeEEEEecCChHHHHHHHHHCCceeeecCCCCEEEEeC-CCCCCHHHHHH
Q 013008 372 LA-----RNP------HV-----KDVRGLGLIIGIEFDVSATPVVDACRDSGLLVLTAGKGNVVRLVP-PLIISEQELDQ 434 (451)
Q Consensus 372 ~~-----~~~------~~-----~~v~g~G~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~iri~~-~~~~t~e~i~~ 434 (451)
.+ +++ .+ ..+..+|.-+.+.|+.+...++++|.++|+..-...+ ++||+.| ++-.+-.|+-.
T Consensus 372 ~k~~~g~~~~~rt~Kl~~~IiTP~~~~erGcQLsl~Fssp~~~vfqeL~krGv~~DkR~P-NvIRvAPvpLYN~f~Dvy~ 450 (465)
T KOG3846|consen 372 LKASKGYKHPLRTEKLFFTIITPTSTDERGCQLSLYFSSPTPKVFQELHKRGVIGDKRRP-NVIRVAPVPLYNTFSDVYI 450 (465)
T ss_pred HHHhcccCchhhhcceeEEEeCCcccccccceEEEEeCCCchHHHHHHHHcCeeccccCC-CceEeecchhhccHHHHHH
Confidence 11 111 11 1123457777777777778899999999998876654 8999986 67789999999
Q ss_pred HHHHHHHHHHHHhh
Q 013008 435 AVEILCKTLPVLDS 448 (451)
Q Consensus 435 ~l~~l~~~l~~~~~ 448 (451)
++..|.++++.+..
T Consensus 451 f~n~L~e~~d~~es 464 (465)
T KOG3846|consen 451 FVNALNEAMDKLES 464 (465)
T ss_pred HHHHHHHHHHHhhc
Confidence 99999999887653
No 382
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=97.73 E-value=0.0018 Score=60.48 Aligned_cols=261 Identities=16% Similarity=0.209 Sum_probs=142.4
Q ss_pred cCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEeeCCCHHHHHH
Q 013008 161 SNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRK 240 (451)
Q Consensus 161 ~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~ 240 (451)
+-||+.|+..+-..+..+. .+..|-+..|.+..+.......+-......+|+.. +...+ |++.+-.
T Consensus 105 slsGTGAl~~~A~Fl~~~~---------~~~~VY~SnPTW~nH~~if~~aGf~tv~~Y~yWd~--~~k~~---d~e~~Ls 170 (410)
T KOG1412|consen 105 SLSGTGALRIAADFLATFY---------NKNTVYVSNPTWENHHAIFEKAGFTTVATYPYWDA--ENKCV---DLEGFLS 170 (410)
T ss_pred eccccchhhhhHHHHHHhc---------ccceeEecCCchhHHHHHHHHcCCceeeeeeeecC--CCcee---cHHHHHH
Confidence 4578888877777555443 35668888888766543322221111111112211 11111 5666655
Q ss_pred hcCC-CCeEEEEEcc-ccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccc----ccccccc---CCCccee
Q 013008 241 LIQP-GKTAAVFVEP-IQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGY----LWAHEHY---GIFPDIM 311 (451)
Q Consensus 241 ~l~~-~~~aavi~ep-~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~----~~~~~~~---~~~pdi~ 311 (451)
.|+. .....+++-. -++++| +-|++|.+.+|+++.++.+.+..+|-+|.|| ..|. .|+..++ |. +=++
T Consensus 171 dl~~APe~si~iLhaCAhNPTG-mDPT~EQW~qia~vik~k~lf~fFDiAYQGf-ASGD~~~DawAiR~fV~~g~-e~fv 247 (410)
T KOG1412|consen 171 DLESAPEGSIIILHACAHNPTG-MDPTREQWKQIADVIKSKNLFPFFDIAYQGF-ASGDLDADAWAIRYFVEQGF-ELFV 247 (410)
T ss_pred HHhhCCCCcEEeeeccccCCCC-CCCCHHHHHHHHHHHHhcCceeeeehhhccc-ccCCccccHHHHHHHHhcCC-eEEE
Confidence 5652 2233333333 344445 5789999999999999999999999999999 4553 3444332 32 1223
Q ss_pred --eecccccC-Cccccccc--c-cHHHHhhccCC---CccCCCCCcHHHHHHHHHHHHHhcChHHHHH------------
Q 013008 312 --TLAKPLAG-GLPIGAAL--V-TEKVASAINYG---DHGSTFAGSPLVCNAAIAVLDKISNPAFLAS------------ 370 (451)
Q Consensus 312 --t~sK~lg~-G~~iG~v~--~-~~~i~~~~~~~---~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~------------ 370 (451)
+|+|-+|- +=|+|.+. + ++.++..+... ....+++. |++.. |.-+-+++..+++.++
T Consensus 248 ~QSFaKNfGlYneRvGnltvv~~n~a~i~~v~SQl~lviR~~~SN-PPAyG-ArIV~kvL~tP~lre~W~~sik~MssRI 325 (410)
T KOG1412|consen 248 CQSFAKNFGLYNERVGNLTVVVNNPAVIAGVKSQLTLVIRSNWSN-PPAYG-ARIVHKVLSTPELREQWIQSIKTMSSRI 325 (410)
T ss_pred EhhhhhhcccccccccceEEEecChhHHHHHHHHHHHHHhhccCC-Ccchh-hHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 58898874 56777542 2 44554443221 22345543 33322 2333344555544443
Q ss_pred ------HHh-----CCCC-c-ceecccceeEEEEecCChHHHHHHHHH-CCceeeecCCCCEEEEeCCCCCCHHHHHHHH
Q 013008 371 ------KLA-----RNPH-V-KDVRGLGLIIGIEFDVSATPVVDACRD-SGLLVLTAGKGNVVRLVPPLIISEQELDQAV 436 (451)
Q Consensus 371 ------~~~-----~~~~-~-~~v~g~G~~~~~~~~~~~~~~~~~l~~-~Gv~~~~~~~~~~iri~~~~~~t~e~i~~~l 436 (451)
+.. +.|+ . .-++..|+|- +......-++.|.+ +.|++.+.| |+.++ ......+|...
T Consensus 326 ~~MR~aLrd~L~aL~TPGtWDHI~~QiGMFS---yTGLtp~qV~~li~~h~vyLl~~G-----RInis-GLN~~NveyVA 396 (410)
T KOG1412|consen 326 KKMRTALRDHLVALKTPGTWDHITQQIGMFS---YTGLTPAQVDHLIENHKVYLLSDG-----RINIS-GLNMKNVEYVA 396 (410)
T ss_pred HHHHHHHHHHHHhcCCCCcHHHHHhhcccee---ecCCCHHHHHHHHHhceEEEecCC-----cEeee-ccccccHHHHH
Confidence 111 1121 0 1134445442 22223445566665 578887754 45444 44667899999
Q ss_pred HHHHHHHHHHhhc
Q 013008 437 EILCKTLPVLDSN 449 (451)
Q Consensus 437 ~~l~~~l~~~~~~ 449 (451)
.+|+++++.+..+
T Consensus 397 kAIde~Vr~~~~~ 409 (410)
T KOG1412|consen 397 KAIDETVRAIKSN 409 (410)
T ss_pred HHHHHHHHhhccC
Confidence 9999999887654
No 383
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=97.67 E-value=0.0066 Score=58.36 Aligned_cols=181 Identities=14% Similarity=0.113 Sum_probs=104.7
Q ss_pred CeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccccccCC-Ccceeeec--ccccC-Cc
Q 013008 246 KTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGI-FPDIMTLA--KPLAG-GL 321 (451)
Q Consensus 246 ~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~-~pdi~t~s--K~lg~-G~ 321 (451)
+.+-|...++....|+.++...+ +-. +.++|+|-.-.-|+| ..++ .-|++.+| |-+|+ |
T Consensus 144 ~~ayv~~~~NeTi~Gv~v~~~p~------~~~--~~~~v~D~SS~ilsr--------~iDvsk~dviyagaQKnlGpaG- 206 (365)
T COG1932 144 NDAYVHFCWNETISGVEVPELPD------IGS--DGLLVADASSAILSR--------PIDVSKYDVIYAGAQKNLGPAG- 206 (365)
T ss_pred CccEEEEecCCcccceEccCCCC------CCC--CceEEEecccHHhcC--------CCChhHcceEEEehhhccCccc-
Confidence 34446666666566766553221 111 278888854322221 1122 35677776 99985 6
Q ss_pred ccccccccHHHHhhccCC------------CccCCCCCcHHH-HHHHHHHHHHhcChH----HHHH----------HHhC
Q 013008 322 PIGAALVTEKVASAINYG------------DHGSTFAGSPLV-CNAAIAVLDKISNPA----FLAS----------KLAR 374 (451)
Q Consensus 322 ~iG~v~~~~~i~~~~~~~------------~~~~t~~~~~~~-~aaa~aal~~~~~~~----~~~~----------~~~~ 374 (451)
++.++.++++.+++... ...++|+.+|.. .....-+++.+...+ +.++ ..+.
T Consensus 207 -ltvvIvr~~~l~r~~~~~~P~if~y~~~~~~~s~yNTPptfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ka~~LY~~id~ 285 (365)
T COG1932 207 -LTVVIVRPDLLERAESYTLPSIFDYLTHADNGSMYNTPPTFAWYLLGLVFKWLKSQGGLEALEARNQAKAQLLYDWIDK 285 (365)
T ss_pred -eEEEEEcHHHHhcccccCCchHhhchhhhccCCccCCcHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHh
Confidence 88889999998887542 245677766543 344445566554321 1111 2222
Q ss_pred CCC----cceeccccee-EEEEec--CChHHHHHHHHHCCceeeecCC-CCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 013008 375 NPH----VKDVRGLGLI-IGIEFD--VSATPVVDACRDSGLLVLTAGK-GNVVRLVPPLIISEQELDQAVEILCKTLPV 445 (451)
Q Consensus 375 ~~~----~~~v~g~G~~-~~~~~~--~~~~~~~~~l~~~Gv~~~~~~~-~~~iri~~~~~~t~e~i~~~l~~l~~~l~~ 445 (451)
.+. +.. ..+..| +.|.+. .....|..++.++|+....++. .+-+|.++--+++.|+++.+++-|+.+.++
T Consensus 286 s~fy~~~v~~-~~RS~mnV~f~~~~~~ld~~fv~eae~~gl~~lkGhr~vgGmRasiynA~~~e~veaL~~fm~~f~~~ 363 (365)
T COG1932 286 SDFYRNLVAK-ANRSRMNVTFTLVDAELDKGFVAEAEAAGLIYLKGHRSVGGLRASIYNAVPLEDVEALTDFMDWFEET 363 (365)
T ss_pred CCccccccch-hhccceeEEEEcCcHHHHHHHHHHHHHcCCceeccccCCCceeeeeecCCCHHHHHHHHHHHHHHHHh
Confidence 231 111 112222 223332 2346688888888987765543 233999988899999999999999887764
No 384
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=97.58 E-value=0.0046 Score=60.50 Aligned_cols=205 Identities=13% Similarity=0.103 Sum_probs=94.4
Q ss_pred CHHHHHHhcC---CCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccc---cccCCC
Q 013008 234 NIEATRKLIQ---PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAH---EHYGIF 307 (451)
Q Consensus 234 d~~~le~~l~---~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~---~~~~~~ 307 (451)
|++++|++++ .+.+.+|+..+.. ..+ ..+ +.+++|.++|++||++.|+.-+|+ +--.-..... ...|..
T Consensus 140 d~~~ie~~i~~~G~~~iLcvltttsc-fap-r~~--D~i~~IakiC~~~~IPhlvNnAYg-vQ~~~~~~~i~~a~~~GRv 214 (389)
T PF05889_consen 140 DLEAIEAKIEELGADNILCVLTTTSC-FAP-RLP--DDIEEIAKICKEYDIPHLVNNAYG-VQSSKCMHLIQQAWRVGRV 214 (389)
T ss_dssp HHHHHHHHHHHHCGGGEEEEEEESST-TTT-B------HHHHHHHHHHHT--EEEEGTTT-TT-HHHHHHHHHHHHHSTC
T ss_pred cHHHHHHHHHHhCCCCeEEEEEecCc-cCC-CCC--ccHHHHHHHHHHcCCceEEccchh-hhHHHHHHHHHHHHhcCCc
Confidence 6788888886 3345555554433 322 222 349999999999999999999984 4100000000 012332
Q ss_pred c-ceeeecccccCCccccccc-c-cHHHHhhccCCCccCCCCCcH---------HHHHHHHHHHHHhc-ChHH-HHH---
Q 013008 308 P-DIMTLAKPLAGGLPIGAAL-V-TEKVASAINYGDHGSTFAGSP---------LVCNAAIAVLDKIS-NPAF-LAS--- 370 (451)
Q Consensus 308 p-di~t~sK~lg~G~~iG~v~-~-~~~i~~~~~~~~~~~t~~~~~---------~~~aaa~aal~~~~-~~~~-~~~--- 370 (451)
| ++-++.|-|=-+.. |.++ + .+..++.+...+-+-.+..+. +++..-...|.... .-.+ .++
T Consensus 215 da~vqS~dkNF~VPvG-gai~As~~~~~i~~vs~~YpGRas~sp~ld~~itLl~LG~~g~~~ll~~r~~~f~~l~erl~~ 293 (389)
T PF05889_consen 215 DAFVQSTDKNFMVPVG-GAIMASFDPSGILAVSKEYPGRASASPSLDLFITLLSLGCTGYGALLKERKASFPYLKERLKK 293 (389)
T ss_dssp SEEEEEHHHHHCEESS-HEEEEESSHHHHHHHHHTSHSHBTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceeeeecCCCEEecCC-CcEEEecCHHHHHHHHHHhhhhhhcccchHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 22245554421100 2222 2 355555554322111111111 22222222221110 0011 111
Q ss_pred HHhCCC-CcceecccceeEEEEec-------CChHHHHHHHHHCCce----eeecCC----------CCEEEEeCCCCCC
Q 013008 371 KLARNP-HVKDVRGLGLIIGIEFD-------VSATPVVDACRDSGLL----VLTAGK----------GNVVRLVPPLIIS 428 (451)
Q Consensus 371 ~~~~~~-~~~~v~g~G~~~~~~~~-------~~~~~~~~~l~~~Gv~----~~~~~~----------~~~iri~~~~~~t 428 (451)
+.+++. .+...+..-..+.+.++ .....|...|..+||. +.+.+. -.++-+.-.+.++
T Consensus 294 ~aee~~e~ll~~p~N~is~a~tl~~l~~~~~k~~~~lgs~Lf~R~VsG~RvV~~~~~~~tsh~~~yp~~Ylt~AsaiG~~ 373 (389)
T PF05889_consen 294 WAEEVGERLLETPRNHISMAFTLDTLYEISQKDGTFLGSMLFKRGVSGIRVVTPGGKKQTSHSSNYPCPYLTAASAIGMT 373 (389)
T ss_dssp HHHHTTEEBSSSTT-SSEEEEE-TTCCTCCSSHHHHHHHHHHHTTEESSEEEETSSCEEETTSS--SSSEEEEEE-TT--
T ss_pred HHHHhhhhhcCCCCCCeeEEEECccchhhccchhhhHHHHHHhCCcccceeeccCCCcccccCCCCchHHHHHHHHhCCC
Confidence 334443 22223233334455553 1235678888888663 222211 1457776688999
Q ss_pred HHHHHHHHHHHHHHHH
Q 013008 429 EQELDQAVEILCKTLP 444 (451)
Q Consensus 429 ~e~i~~~l~~l~~~l~ 444 (451)
+||+|.++++|+++++
T Consensus 374 ~eevd~~v~rL~k~i~ 389 (389)
T PF05889_consen 374 REEVDYFVKRLDKIIK 389 (389)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhC
Confidence 9999999999999875
No 385
>PRK12566 glycine dehydrogenase; Provisional
Probab=97.55 E-value=0.04 Score=60.23 Aligned_cols=263 Identities=13% Similarity=0.134 Sum_probs=135.5
Q ss_pred HHHHHHHHhhccCCC--eEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCC
Q 013008 142 QIELAKRLVACSFAD--RVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSP 219 (451)
Q Consensus 142 ~~~l~~~l~~~~~~e--~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~ 219 (451)
..++...++++.|+| +.-....++.+-| |+.+++.+++. .+++|++.+ .-|..+...+..-.
T Consensus 126 l~e~Qtmi~~LtGm~vaNASl~D~atA~aE-A~~ma~~~~~~-------k~~~~~v~~-~~hP~~~~v~~t~~------- 189 (954)
T PRK12566 126 LLNFQQMTIDLTGLDLANASLLDEATAAAE-AMALAKRVAKS-------KSNRFFVDE-HCHPQTLSVLRTRA------- 189 (954)
T ss_pred HHHHHHHHHHHhCchhhhhhhccchhHHHH-HHHHHHHHhhc-------CCCEEEECC-CCCHHHHHHHHHhh-------
Confidence 345666778888866 4456666666666 44444444431 245555554 55555544332111
Q ss_pred CcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccc
Q 013008 220 FEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLW 299 (451)
Q Consensus 220 ~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~ 299 (451)
.+ .++..+. +++++.+.. ++++|++.-.+. -|.+.. +++|.++++++|+++|+- +..--.+..-
T Consensus 190 -~~--~g~~i~~----~~~~~~~~~-~~~~v~vq~P~~-~G~i~d----~~~i~~~~h~~gal~~~~---~d~laL~ll~ 253 (954)
T PRK12566 190 -EG--FGFELVV----DAVDNLAAH-AVFGALLQYPDT-HGEIRD----LRPLIDQLHGQQALACVA---ADLLSLLVLT 253 (954)
T ss_pred -hc--CCcEEEE----cchhhcCCC-CEEEEEEECCCC-ceEEcc----HHHHHHHHHHcCCEEEEE---eCHHHHhCCC
Confidence 11 1222221 344555543 688888754333 354433 899999999999987732 2210111111
Q ss_pred cccccCCCcceee-----eccccc-CCcccccccccHHHHhhccCCC----------------------------ccCCC
Q 013008 300 AHEHYGIFPDIMT-----LAKPLA-GGLPIGAALVTEKVASAINYGD----------------------------HGSTF 345 (451)
Q Consensus 300 ~~~~~~~~pdi~t-----~sK~lg-~G~~iG~v~~~~~i~~~~~~~~----------------------------~~~t~ 345 (451)
....+ ..||++ ||=.++ ||--.|++.+++++...+.... ..+..
T Consensus 254 ~Pge~--GADI~vG~~Q~fGvp~~~GGP~ag~~a~~~~~~R~~PGRivG~s~D~~G~~a~~l~LqtREQHIRReKAtSNI 331 (954)
T PRK12566 254 PPGEL--GADVVLGSTQRFGVPMGYGGPHAAYFACRDDYKRAMPGRIIGVSRDARGNTALRMALQTREQHIRREKANSNI 331 (954)
T ss_pred Chhhc--CCcEEeeCCCcCCCCCCCCCCCeeeeeehHHHHhhCCCCccceeecCCCCeeeehhhhHHHHHhhhccccchh
Confidence 11122 356652 333444 3445678888888776653110 11222
Q ss_pred CCcHHHHHHHHHHHHHh-cChHHHH---H-------HHhCC--CCcceecccceeEEEEec--CChHHHHHHHHHCCcee
Q 013008 346 AGSPLVCNAAIAVLDKI-SNPAFLA---S-------KLARN--PHVKDVRGLGLIIGIEFD--VSATPVVDACRDSGLLV 410 (451)
Q Consensus 346 ~~~~~~~aaa~aal~~~-~~~~~~~---~-------~~~~~--~~~~~v~g~G~~~~~~~~--~~~~~~~~~l~~~Gv~~ 410 (451)
+.|..-+|.+.+..-.+ -.+++.+ + +.+.+ ..+..+ ..-+|--|.++ ..+.++.++..++|+.+
T Consensus 332 CT~qaL~A~~a~~Y~~~~Gp~Gl~~ia~~~~~~a~~l~~~l~~~g~~~~-~~~fF~~~~v~~~~~~~~~~~~a~~~~~n~ 410 (954)
T PRK12566 332 CTAQVLLANIAGFYAVYHGPEGLKRIAQRVHRLTAILAAGLEAKGIKRL-NRHFFDTLTLEVGGAQAAIIESAEAARINL 410 (954)
T ss_pred hHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhcCCccc-cCCccceEEEEccCCHHHHHHHHHHCCCee
Confidence 22322222222222111 2222222 1 11111 122111 11223222222 24677889999999998
Q ss_pred eecCCCCEEEEeCCCCCCHHHHHHHHHHHH
Q 013008 411 LTAGKGNVVRLVPPLIISEQELDQAVEILC 440 (451)
Q Consensus 411 ~~~~~~~~iri~~~~~~t~e~i~~~l~~l~ 440 (451)
.-... +.+.+++.-++|.+|++.+++.+.
T Consensus 411 r~~~~-~~~~~s~de~~~~~~~~~~~~~f~ 439 (954)
T PRK12566 411 RILGR-GRLGVSLDETCDEATVARLFDIFL 439 (954)
T ss_pred EEeCC-CeEEEEeCCCCCHHHHHHHHHHhc
Confidence 87655 678899899999999999999984
No 386
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=97.28 E-value=0.0093 Score=55.65 Aligned_cols=201 Identities=15% Similarity=0.147 Sum_probs=119.2
Q ss_pred CCHHHHHHHHHH-Hhh--cccccCCCCCHH-HHHHHHHHhhccCCCeEEe---cCCHHHHHHHHHHHHHHHhhhcCCCCC
Q 013008 115 GDADWIKAVVDQ-ANV--LTHVSNMYYSIP-QIELAKRLVACSFADRVFF---SNTGTEANEAAIKFARKFQRHSNPDSK 187 (451)
Q Consensus 115 ~~p~v~~a~~~~-~~~--~~~~~~~~~~~~-~~~l~~~l~~~~~~e~v~~---~~sG~eA~~~al~~a~~~~~~~~~~~~ 187 (451)
|..+|.+|.++. +.. +...+++++++. +..|.+-.++.++.|..++ .-||+.|+..|+.-.+.
T Consensus 36 Nq~kVL~AF~~~rvs~~hf~~stGYGydD~GRdtLe~vyA~vf~aE~a~VRpq~isGTHAI~~aLfg~LR---------- 105 (416)
T COG4100 36 NQKKVLEAFRHHRVSESHFTGSTGYGYDDLGRDTLERVYAQVFGAEAALVRPQIISGTHAIACALFGILR---------- 105 (416)
T ss_pred HHHHHHHHHHhcccchhccCCCCCCCccccchhHHHHHHHHHhccccceeeeeeecchhHHHHHHHhccC----------
Confidence 345666666652 221 222233334443 8889888999988553332 23799999999886552
Q ss_pred CCCceEEEEcCCccCChhhhhhccCCC-----CcCCCC--cCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEccccCCCC
Q 013008 188 EPATEFVSFTNSFHGRTMGALALTSKE-----HYRSPF--EPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGG 260 (451)
Q Consensus 188 ~~~~~ii~~~~~yhg~~~~~~~~~~~~-----~~~~~~--~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~~~~~G 260 (451)
|+|..+...+.=.-.....+.+.+.. .+...| .++.++-.. |.+.++..+.+ +++.|.+--..|-.-
T Consensus 106 -pgDell~i~G~PYDTLeevIG~rg~~~gSL~dfgi~Y~~v~Lt~~gki----D~~~v~~~i~~-~tkli~IQRS~GY~~ 179 (416)
T COG4100 106 -PGDELLYITGSPYDTLEEVIGLRGEGQGSLKDFGIKYKAVPLTADGKI----DIQAVKTAISD-RTKLIGIQRSKGYAW 179 (416)
T ss_pred -CCCeEEEecCCcchhHHHHhccCCCCcccHHHhCcceeecccccCCcc----cHHHHHHhcCc-cceEEEEEeccCcCC
Confidence 78988887654222211112222211 001011 122222111 78999999974 677777765544332
Q ss_pred ccccCHHHHHHHHHHHHHh--CCEEEEeccccCCCcccccccccccCCCccee--eecccccCCc--ccccccccHHHHh
Q 013008 261 IYSATKEFLQFLRDACDDA--GALLVFDEVQCGLGRTGYLWAHEHYGIFPDIM--TLAKPLAGGL--PIGAALVTEKVAS 334 (451)
Q Consensus 261 ~~~~~~~~l~~l~~l~~~~--g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~--t~sK~lg~G~--~iG~v~~~~~i~~ 334 (451)
--..+-+.++++.++.++- ++++.+|..|..|--. .+-..+..|++ ++-|-.|||+ ..||+.+++++.+
T Consensus 180 RpS~~I~eI~~~i~~vk~inpn~ivFVDNCYGEFvE~-----~EPt~vGaDliAGSLIKNpGGgiaktGGYiaGk~~~ve 254 (416)
T COG4100 180 RPSLSIAEIEEMITFVKEINPNVIVFVDNCYGEFVEE-----KEPTHVGADLIAGSLIKNPGGGIAKTGGYIAGKAELVE 254 (416)
T ss_pred CCcccHHHHHHHHHHHHhcCCCEEEEEeccchhhhhc-----cCccccchhhhccceeeCCCCceeeccceeechHHHHH
Confidence 1123456788888888774 6889999999767322 22224556766 6779888873 5688999999988
Q ss_pred hc
Q 013008 335 AI 336 (451)
Q Consensus 335 ~~ 336 (451)
..
T Consensus 255 ~~ 256 (416)
T COG4100 255 AA 256 (416)
T ss_pred hh
Confidence 75
No 387
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=97.23 E-value=0.00065 Score=64.73 Aligned_cols=265 Identities=17% Similarity=0.147 Sum_probs=133.7
Q ss_pred HHHHHHHHhhc---cC-----CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCC
Q 013008 142 QIELAKRLVAC---SF-----ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK 213 (451)
Q Consensus 142 ~~~l~~~l~~~---~~-----~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~ 213 (451)
..+|++.|.++ .| ...++|.+|+++-+.+|+-++..... . ..+.-+|+...|-|.-+....--+..
T Consensus 45 s~eL~~~Ir~LH~~VGNAvt~gr~IV~GtGsTQL~~AalyALSp~~~--~---~~~p~~VVa~aPYY~~Y~~qt~~f~s- 118 (363)
T PF04864_consen 45 SPELERQIRRLHRVVGNAVTDGRYIVFGTGSTQLFNAALYALSPNAS--P---SSSPASVVAAAPYYSSYPEQTDFFDS- 118 (363)
T ss_dssp -HHHHHHHHHHHHHH-SB--TTSEEEEECHHHHHHHHHHHHHCHHT---T---TSSSEEEEE-SS--CHHHHHCCCT-B-
T ss_pred cHHHHHHHHHHHHHhccccccCcEEEEcCCHHHHHHHHHHhcCCCCC--C---CCCCceeEecCCCccchHHHHHhccc-
Confidence 45565555554 34 34688888889999988886543211 0 12456799999988655433211110
Q ss_pred CCcCCCCcCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCC
Q 013008 214 EHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLG 293 (451)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~g 293 (451)
....+. .|.......=.....-=+++.|+|+.|... + .+++.-+..+|.|=+|-.--
T Consensus 119 -----------~~y~w~--Gda~~~~~~~~~~~~IElVTSPNNPDG~lr-------~---~V~~g~~~k~I~D~AYYWPh 175 (363)
T PF04864_consen 119 -----------RLYKWA--GDASNFKNSDNPSPYIELVTSPNNPDGQLR-------E---AVLNGSSGKVIHDLAYYWPH 175 (363)
T ss_dssp -----------TTEEEE--EECCCGTT-S-CCGEEEEEESS-TTT----------------SSTTTEEEEEEE-TT-STT
T ss_pred -----------cCcccc--ccHHhhccCCCCCCeEEEEeCCCCCccccc-------c---hhcCCCCcceeeeeeeeccc
Confidence 011110 011111100012345557777776665321 1 13455667789998874221
Q ss_pred cccccccccccCCCccee--eeccccc-CCccccccccc-HHHHhhccCCCccCCCCCcHHHHHHHHHHHHHhcC----h
Q 013008 294 RTGYLWAHEHYGIFPDIM--TLAKPLA-GGLPIGAALVT-EKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISN----P 365 (451)
Q Consensus 294 r~G~~~~~~~~~~~pdi~--t~sK~lg-~G~~iG~v~~~-~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~----~ 365 (451)
++.-.. ...-||+ |+||.-| +|-|+||.+.+ +++.+.+......+|.+.+-=+|.-++..|+.+.+ +
T Consensus 176 yTpI~~-----~aD~DiMLFT~SK~TGHAGSR~GWAlVKD~~Va~kM~~y~~lnTiGvS~dsQLRa~kiLk~v~~~~~~~ 250 (363)
T PF04864_consen 176 YTPITA-----PADHDIMLFTLSKLTGHAGSRFGWALVKDEEVAKKMTKYMELNTIGVSRDSQLRALKILKVVLDGYGTE 250 (363)
T ss_dssp TS---S------B--SEEEEEHHHHCS-GGG-EEEEEES-HHHHHHHHHHHHHHCSS--HHHHHHHHHHHHHHHHHCCHH
T ss_pred ccccCC-----CCCCceEEEEEecccCccccccceeeecCHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHhcccCC
Confidence 221111 1123554 7899888 58999998876 56666654444456777776666666666655321 1
Q ss_pred ----HHH--------HH------HHhC--------C-C----Cccee-cccceeEEEEecCCh-HHHHHHHHHCCceeee
Q 013008 366 ----AFL--------AS------KLAR--------N-P----HVKDV-RGLGLIIGIEFDVSA-TPVVDACRDSGLLVLT 412 (451)
Q Consensus 366 ----~~~--------~~------~~~~--------~-~----~~~~v-~g~G~~~~~~~~~~~-~~~~~~l~~~Gv~~~~ 412 (451)
++. ++ ..+. + | ....+ .+...+.|+.++... .+....|++.||+...
T Consensus 251 ~~~~~~F~f~~~~M~~RW~~L~~~~~~S~rFSLq~~~~~yC~ff~~~~~psPafAWlkCe~eed~DC~~~l~~~~I~tr~ 330 (363)
T PF04864_consen 251 KGTEDIFHFGYSTMRERWEKLRAAVSASKRFSLQKFSPQYCNFFKRVREPSPAFAWLKCEREEDEDCYAVLREAKIITRS 330 (363)
T ss_dssp TTTTSHHHHHHHHHHHHHHHHHHHHCCSSSEEE---SCEEETTTTCEEE---SEEEEEESSCGGSSHHHHHHCTTEEEEE
T ss_pred CCccchHHHHHHHHHHHHHHHHHHHHhcCceecCcCCchhccccccccCCCCCeEEEecCCcccccHHHHHHhCCcccCC
Confidence 111 11 1111 1 1 11112 234568888885332 3455666677888776
Q ss_pred cC----CCCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 013008 413 AG----KGNVVRLVPPLIISEQELDQAVEILCKT 442 (451)
Q Consensus 413 ~~----~~~~iri~~~~~~t~e~i~~~l~~l~~~ 442 (451)
+. ...++|+ ++..++++.|.++++|.+.
T Consensus 331 G~~fga~~ryVRl--Sml~~~d~Fd~l~~rL~~l 362 (363)
T PF04864_consen 331 GVLFGADSRYVRL--SMLKRDDDFDQLLERLSKL 362 (363)
T ss_dssp GGGGTS-TTEEEE--ESSS-HHHHHHHHHHHHCC
T ss_pred CCccCCCCCeEEE--eccCCHHHHHHHHHHHHhh
Confidence 52 1367888 6788999999999999753
No 388
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=96.99 E-value=0.034 Score=53.04 Aligned_cols=227 Identities=17% Similarity=0.158 Sum_probs=115.6
Q ss_pred CCceEEEeecccEEEecCCCEEEeeccCcccccCCCCCHHHHHHHHHHHhh-ccc-ccCCCCCHHHHHHHHHHhhccC--
Q 013008 79 RAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANV-LTH-VSNMYYSIPQIELAKRLVACSF-- 154 (451)
Q Consensus 79 ~~p~~~~~~~G~~l~d~~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~-~~~-~~~~~~~~~~~~l~~~l~~~~~-- 154 (451)
+.|..+-=|-|+| .|.+|+.|+= |.|++|=.+.+.. ..- +..........++..+|+=--.
T Consensus 50 ~n~~KiNLgvGaY-Rdd~gKp~vL--------------~~VrkAE~ql~~~~ldKEYlpI~Gl~eF~k~sakLa~G~~s~ 114 (427)
T KOG1411|consen 50 PNPKKINLGVGAY-RDDNGKPYVL--------------PSVRKAEQQLASLSLDKEYLPITGLAEFNKLSAKLALGDNSP 114 (427)
T ss_pred CCcceeeecccce-ecCCCCeeee--------------HHHHHHHHHHhhhcccchhccccchHHHHHHHHHHhhcCCch
Confidence 3566777788887 5667887751 5666665543331 110 1111122223344444431111
Q ss_pred ---CCeEEe--cCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeE
Q 013008 155 ---ADRVFF--SNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNF 229 (451)
Q Consensus 155 ---~e~v~~--~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (451)
-.++.. +-||+-|...+-..+..|. +...|.+.+|++-.+.... ...+.+.- .|+-..+...-
T Consensus 115 ~ik~~Ri~tvQ~lSGTGaLriga~Fl~~f~---------~~~~I~ip~PTWgNh~~if-~~ag~~~~--~yrYyd~~t~g 182 (427)
T KOG1411|consen 115 VIKEKRIVTVQTLSGTGALRVGAEFLARFY---------PSRDIYIPDPTWGNHKNIF-KDAGLPVK--FYRYYDPKTRG 182 (427)
T ss_pred hhhccceeEEEeccCcchhhHHHHHHHhhc---------cccceeecCCcccccCccc-cccCccee--eeeeccccccc
Confidence 224443 4567777766666555554 3667999999885543211 11111100 00011111111
Q ss_pred eeCCCHHH-HHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCccccc----cccccc
Q 013008 230 VEYGNIEA-TRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYL----WAHEHY 304 (451)
Q Consensus 230 ~~~~d~~~-le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~----~~~~~~ 304 (451)
+ |.+. ++++-+...-..|++-.-.+|+..+-|+.+.+++|.++-++.+.+-++|-+|.|| -.|.. ++...+
T Consensus 183 l---d~~g~ledl~~~p~gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmAYQGf-aSG~~d~DA~avR~F 258 (427)
T KOG1411|consen 183 L---DFKGMLEDLGEAPEGSIILLHACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMAYQGF-ASGDLDKDAQAVRLF 258 (427)
T ss_pred c---chHHHHHHHhcCCCCcEEEeehhhcCCCCCCccHHHHHHHHHHhhhccccchhhhhhccc-ccCCchhhHHHHHHH
Confidence 1 3333 2222221123345554433333336789999999999999999999999999999 45542 111111
Q ss_pred ---CCCcce-eeecccccC-Ccccccc--cc-cHHHHhhc
Q 013008 305 ---GIFPDI-MTLAKPLAG-GLPIGAA--LV-TEKVASAI 336 (451)
Q Consensus 305 ---~~~pdi-~t~sK~lg~-G~~iG~v--~~-~~~i~~~~ 336 (451)
|...-+ -+++|-+|- |=|+|++ ++ +.+...++
T Consensus 259 ~~~g~~~~laQSyAKNMGLYgERvGa~svvc~~ad~A~rV 298 (427)
T KOG1411|consen 259 VEDGHEILLAQSYAKNMGLYGERVGALSVVCKDADEAKRV 298 (427)
T ss_pred HHcCCceEeehhhhhhcchhhhccceeEEEecCHHHHHHH
Confidence 222211 167888873 5577765 33 34444443
No 389
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=96.91 E-value=0.01 Score=57.93 Aligned_cols=178 Identities=18% Similarity=0.119 Sum_probs=101.2
Q ss_pred HHHHHHHHhhccC--C-CeEEecCCHHHHHHHHHHHHHHHhh----hcCCCCCCCCceEEEEcCCccCChhhhhhccCCC
Q 013008 142 QIELAKRLVACSF--A-DRVFFSNTGTEANEAAIKFARKFQR----HSNPDSKEPATEFVSFTNSFHGRTMGALALTSKE 214 (451)
Q Consensus 142 ~~~l~~~l~~~~~--~-e~v~~~~sG~eA~~~al~~a~~~~~----~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~ 214 (451)
..++-.++.+..+ . .+-+|++||+-+|..++.+||--.- ..+-. .=++-|++.+.--|-+..-+...-|-.
T Consensus 143 E~~vl~km~~ivGw~~~~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~--~~p~lilFtSeesHYSi~kaAa~lg~g 220 (510)
T KOG0629|consen 143 EEEVLAKMREIVGWEEGGDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMF--ALPPLILFTSEESHYSIKKAAAFLGLG 220 (510)
T ss_pred hHHHHHHHHHHhCCCCCCCceecCCchhHHHHHHHHHHhhcCchhhhhhhh--cCCcEEEEecccchhhHHHHHHHhccC
Confidence 4455556666655 3 3778999999999999999983210 00100 012456666655565543333322111
Q ss_pred CcCCCCcCCCCCeeEeeCC-----CHHHHHHhcC----CCCeEEEEEccccCCC--CccccCHHHHHHHHHHHHHhCCEE
Q 013008 215 HYRSPFEPVMPGVNFVEYG-----NIEATRKLIQ----PGKTAAVFVEPIQGEG--GIYSATKEFLQFLRDACDDAGALL 283 (451)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~-----d~~~le~~l~----~~~~aavi~ep~~~~~--G~~~~~~~~l~~l~~l~~~~g~ll 283 (451)
...+..++.+ ++++||+.|. .+-+- ++++...|++ |..-+ |..|+++|++|+.++
T Consensus 221 ---------td~c~~v~t~e~Gkm~~~dLe~kile~k~kg~~P-f~vnaTaGTTV~GAFDd----L~~iadiC~k~~lWm 286 (510)
T KOG0629|consen 221 ---------TDHCIKVKTDERGKMIPDDLEKKILEAKAKGGVP-FFVNATAGTTVLGAFDD----LNGIADICEKHKLWM 286 (510)
T ss_pred ---------CceeEEecccccCccchHHHHHHHHHHHhcCCCC-eEEEecCCceeeeccCc----HHHHHHHHHhcCEEE
Confidence 1223333333 5789998885 11122 3333333332 44444 999999999999999
Q ss_pred EEeccccCCCcccccccccccCCC-cceeeec--ccccCCcccccccccHH-HHhh
Q 013008 284 VFDEVQCGLGRTGYLWAHEHYGIF-PDIMTLA--KPLAGGLPIGAALVTEK-VASA 335 (451)
Q Consensus 284 I~DEv~tg~gr~G~~~~~~~~~~~-pdi~t~s--K~lg~G~~iG~v~~~~~-i~~~ 335 (451)
.+|-+..|---...-.-....|+. .|-++-+ |-+|..++.++++.+++ +++.
T Consensus 287 HvDAAwGGglLmS~k~R~kl~Giera~SvtwnpHK~~gaplqCsa~l~r~~gll~~ 342 (510)
T KOG0629|consen 287 HVDAAWGGGLLMSRKHRHKLTGIERANSVTWNPHKLMGAPLQCSAFLTREEGLLQR 342 (510)
T ss_pred EeecccccccccChhhHhhccCccccCceeecHHHhhcCcchhhHHHHHHHHHHHh
Confidence 999998541011111111223453 4555554 78888899999888754 4443
No 390
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=96.83 E-value=0.0056 Score=52.69 Aligned_cols=55 Identities=20% Similarity=0.181 Sum_probs=45.0
Q ss_pred CCCHHHHHHHHHHhhccC------CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccC
Q 013008 137 YYSIPQIELAKRLVACSF------ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHG 202 (451)
Q Consensus 137 ~~~~~~~~l~~~l~~~~~------~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg 202 (451)
+....+.++++++.+.++ .++|++|+|+++|++.+++++. +++|.|++.+|.|+|
T Consensus 93 G~~~lR~AiA~~l~~~~g~~v~~~pd~Ivvt~Ga~~al~~l~~~l~-----------dpGD~VlVp~P~Y~~ 153 (153)
T PLN02994 93 GLANFRKAIANFMAEARGGRVKFDADMIVLSAGATAANEIIMFCIA-----------DPGDAFLVPTPYYAA 153 (153)
T ss_pred CcHHHHHHHHHHHHHHhCCCCccchhheEEcCCHHHHHHHHHHHHc-----------CCCCEEEEeCCCCCC
Confidence 344557888888877643 5799999999999999999776 379999999999975
No 391
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=96.45 E-value=0.11 Score=49.96 Aligned_cols=281 Identities=19% Similarity=0.184 Sum_probs=140.4
Q ss_pred CCHHHHHHHHHHHhh-cccc---cCCC-CCHHHHHHHHHHhh-----ccCCC------eEEecCCHHHHHHHHHHHHHHH
Q 013008 115 GDADWIKAVVDQANV-LTHV---SNMY-YSIPQIELAKRLVA-----CSFAD------RVFFSNTGTEANEAAIKFARKF 178 (451)
Q Consensus 115 ~~p~v~~a~~~~~~~-~~~~---~~~~-~~~~~~~l~~~l~~-----~~~~e------~v~~~~sG~eA~~~al~~a~~~ 178 (451)
.+-.|.+|+-..+.. +.-+ ..+| .++ ..+-.|.|++ .++.| .|. .-||+-||..+-.++..
T Consensus 52 ts~aVmeAlGS~ltNKYSEGyPG~RYYGGne-~ID~iE~LCq~RALeaF~ldp~kWGVNVQ-p~SGSPANfavYtall~- 128 (477)
T KOG2467|consen 52 TSRAVMEALGSCLTNKYSEGYPGARYYGGNE-YIDQIELLCQKRALEAFGLDPEKWGVNVQ-PYSGSPANFAVYTALLK- 128 (477)
T ss_pred hHHHHHHHHhHHhhcccccCCCcccccCcch-HHHHHHHHHHHHHHHHhCCCHHHCceeec-cCCCCchhhHHHhhhcC-
Confidence 456777877776643 2211 1122 233 3333334433 34422 233 34799999988877663
Q ss_pred hhhcCCCCCCCCceEEEEcCCc-----cCChhhhhhccCCCCcCCCC-cCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEE
Q 013008 179 QRHSNPDSKEPATEFVSFTNSF-----HGRTMGALALTSKEHYRSPF-EPVMPGVNFVEYGNIEATRKLIQPGKTAAVFV 252 (451)
Q Consensus 179 ~~~~~~~~~~~~~~ii~~~~~y-----hg~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ 252 (451)
|.++|.-.+--- ||+....-..|....+...+ ....+..-.+ |.|.||+.-..-++.++|+
T Consensus 129 ----------Ph~RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv~~~TG~I---DYD~Le~~A~~frPk~iia 195 (477)
T KOG2467|consen 129 ----------PHERIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKVDPSTGYI---DYDKLEKTATLFRPKLIIA 195 (477)
T ss_pred ----------CCCeeeeccCCCCCccccccccCCceeeeeeeecccCceeeCCCCCce---ehHHHHHHHHhcCCcEEEe
Confidence 577777665322 34332222223222222111 0112223334 5566665544334566666
Q ss_pred ccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccc-cCCCcccc-cccccccCCCcceee--ecccccCCcccccccc
Q 013008 253 EPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQ-CGLGRTGY-LWAHEHYGIFPDIMT--LAKPLAGGLPIGAALV 328 (451)
Q Consensus 253 ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~-tg~gr~G~-~~~~~~~~~~pdi~t--~sK~lg~G~~iG~v~~ 328 (451)
-.. .-+-.-...+++++|++.|++|++|=+| +|+-..|. ...+++ .||+| .=|+|-| -|.|.|..
T Consensus 196 G~S------aY~R~~DYaR~R~Iad~~gA~Lm~DMAHISgLVAA~vipsPFey----~DiVTTTTHKsLRG-PRg~mIFy 264 (477)
T KOG2467|consen 196 GTS------AYSRLIDYARFRKIADKVGAYLMADMAHISGLVAAGVIPSPFEY----CDIVTTTTHKSLRG-PRGAMIFY 264 (477)
T ss_pred ccc------cchhhccHHHHHHHHHhcCceeehhhhhHHHHHhcccCCCcccc----cceeeccccccccC-CcceeEEE
Confidence 321 1112223788999999999999999997 55544443 223333 45664 4488864 24444443
Q ss_pred cHHHH---------------hhcc----CCCccCCCCCcHHHHHHHHHHHHHhcChHHHHHHHhCCCCcceecccceeEE
Q 013008 329 TEKVA---------------SAIN----YGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASKLARNPHVKDVRGLGLIIG 389 (451)
Q Consensus 329 ~~~i~---------------~~~~----~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~v~g~G~~~~ 389 (451)
++-+. +.+. ++.+++..+ + ..++...+|..-..+++.+ ..++ +
T Consensus 265 RkGvk~~~~k~g~~i~ydlE~kINfaVFP~lQGGPHN-h--tIaalAvALkQa~tpefk~-Yq~q---V----------- 326 (477)
T KOG2467|consen 265 RKGVKSIKPKQGKEILYDLEDKINFAVFPGLQGGPHN-H--TIAALAVALKQAMTPEFKE-YQKQ---V----------- 326 (477)
T ss_pred eccCCcCCCCCCCcceechhhhhhhhccccccCCCCc-c--hHHHHHHHHHhhCCHHHHH-HHHH---H-----------
Confidence 33211 1111 122333332 2 2233334455555566544 2221 1
Q ss_pred EEecCChHHHHHHHHHCCceeeecCCCCEEEE-e-CCCCCCHHHHHHHHHHHHHHH
Q 013008 390 IEFDVSATPVVDACRDSGLLVLTAGKGNVVRL-V-PPLIISEQELDQAVEILCKTL 443 (451)
Q Consensus 390 ~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~iri-~-~~~~~t~e~i~~~l~~l~~~l 443 (451)
..++..+++.|.++|.-+..+|..+.+-+ - -+..++-..+++.++.+.-++
T Consensus 327 ---~~Nakala~~l~~~Gy~lvtgGTDnHlvLvDLr~~G~dGarvE~vle~~~I~~ 379 (477)
T KOG2467|consen 327 ---LKNAKALASALISRGYKLVTGGTDNHLVLVDLRPKGVDGARVEKVLELCHIAL 379 (477)
T ss_pred ---HHHHHHHHHHHHHcCceEecCCccceEEEEeccccCCchHHHHHHHHHhhhhh
Confidence 02466788888888887776665344321 1 145566666777776665444
No 392
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=92.97 E-value=0.65 Score=46.28 Aligned_cols=55 Identities=22% Similarity=0.278 Sum_probs=40.0
Q ss_pred CHHHHHHhcC----CCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccC
Q 013008 234 NIEATRKLIQ----PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCG 291 (451)
Q Consensus 234 d~~~le~~l~----~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg 291 (451)
+.+.|+++|+ .+-+-.+++-. .|++|. ..-+.|.+|..+|+++|++|.+|-+|+|
T Consensus 218 r~~~L~~AIe~D~arGlIPf~v~at-~GTT~~--ca~D~l~elg~Vc~~~glWLHVDAAYAG 276 (511)
T KOG0628|consen 218 RGDTLRKAIEEDIARGLIPFFVCAT-LGTTSS--CAFDELEELGPVCREEGLWLHVDAAYAG 276 (511)
T ss_pred CHHHHHHHHHHHHhCCCccEEEEEe-ecCccc--cccccHHHhcchhhhcCEEEEeehhhcc
Confidence 4678888886 23344455444 455544 3456699999999999999999999986
No 393
>PRK05782 bifunctional sirohydrochlorin cobalt chelatase/precorrin-8X methylmutase; Validated
Probab=85.07 E-value=19 Score=35.23 Aligned_cols=50 Identities=12% Similarity=0.099 Sum_probs=31.9
Q ss_pred CCCcceeeecccccCCccccccccc--HH-HHhhccC-CCccCCCCCcHHHHHHHHHHHHH
Q 013008 305 GIFPDIMTLAKPLAGGLPIGAALVT--EK-VASAINY-GDHGSTFAGSPLVCNAAIAVLDK 361 (451)
Q Consensus 305 ~~~pdi~t~sK~lg~G~~iG~v~~~--~~-i~~~~~~-~~~~~t~~~~~~~~aaa~aal~~ 361 (451)
++.|.+++ |+|+|||-+. ++ +++.--+ ....++-+|++++.++..+.++.
T Consensus 279 ~~~palvi-------g~PVGFV~a~esKe~L~~~~vP~I~~~G~kGGs~vAaa~vNal~~~ 332 (335)
T PRK05782 279 GVDIPFIV-------ATPPGFTNAKEVKEALIESGIPSVVLRGTYGGSGIAVAIINELIKM 332 (335)
T ss_pred CCCCcEEE-------EeCCcccCHHHHHHHHHhCCCCEEEEecCCCcHHHHHHHHHHHHHH
Confidence 56777665 7899999763 33 3321111 13456788999988887776653
No 394
>smart00642 Aamy Alpha-amylase domain.
Probab=69.42 E-value=12 Score=32.64 Aligned_cols=58 Identities=19% Similarity=0.176 Sum_probs=39.9
Q ss_pred CHHHHHHhcC---CCCeEEEEEccccCCCCc-----------------cccCHHHHHHHHHHHHHhCCEEEEeccccC
Q 013008 234 NIEATRKLIQ---PGKTAAVFVEPIQGEGGI-----------------YSATKEFLQFLRDACDDAGALLVFDEVQCG 291 (451)
Q Consensus 234 d~~~le~~l~---~~~~aavi~ep~~~~~G~-----------------~~~~~~~l~~l~~l~~~~g~llI~DEv~tg 291 (451)
|++.+.+.+. .-.+.+|.+.|++..... ..-+.+.++++++-|+++|+-+|.|=|...
T Consensus 17 ~~~gi~~~l~yl~~lG~~~I~l~Pi~~~~~~~~~~~gY~~~d~~~i~~~~Gt~~d~~~lv~~~h~~Gi~vilD~V~NH 94 (166)
T smart00642 17 DLQGIIEKLDYLKDLGVTAIWLSPIFESPQGYPSYHGYDISDYKQIDPRFGTMEDFKELVDAAHARGIKVILDVVINH 94 (166)
T ss_pred CHHHHHHHHHHHHHCCCCEEEECcceeCCCCCCCCCCcCccccCCCCcccCCHHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 4555544432 345778888887544310 122457899999999999999999999653
No 395
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=65.57 E-value=1.9e+02 Score=30.85 Aligned_cols=46 Identities=13% Similarity=0.195 Sum_probs=38.0
Q ss_pred CChHHHHHHHHHCCceeeecCCCCEEEEeCCCCCCHHHHHHHHHHHH
Q 013008 394 VSATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILC 440 (451)
Q Consensus 394 ~~~~~~~~~l~~~Gv~~~~~~~~~~iri~~~~~~t~e~i~~~l~~l~ 440 (451)
....++..+..++++-++-... +.+-+++--+++++|+|.++..+.
T Consensus 433 ~s~~~~l~rA~~~~iNlr~~ed-~tigvslDETv~~~DvddLl~vf~ 478 (1001)
T KOG2040|consen 433 CSAEEVLDRAAKRQINLRLVED-GTIGVSLDETVTEKDVDDLLWVFN 478 (1001)
T ss_pred CcHHHHHHHHHhhcCceEEeec-CceEEeecccccHHHHHHHHHHHc
Confidence 4577888888888888876655 668888888999999999998886
No 396
>PF13481 AAA_25: AAA domain; PDB: 1G8Y_J 1OLO_A 1NLF_C.
Probab=64.19 E-value=14 Score=32.66 Aligned_cols=52 Identities=13% Similarity=0.259 Sum_probs=31.5
Q ss_pred CHHHHHHhcCC-CCeEEEEEccccCCCCccccC----HHHHHHHHHHHHHhCCEEEE
Q 013008 234 NIEATRKLIQP-GKTAAVFVEPIQGEGGIYSAT----KEFLQFLRDACDDAGALLVF 285 (451)
Q Consensus 234 d~~~le~~l~~-~~~aavi~ep~~~~~G~~~~~----~~~l~~l~~l~~~~g~llI~ 285 (451)
+++.+++.+.. .++.+|++||...-.+.-.-+ ..++..+.++|+++|+.+|+
T Consensus 128 ~~~~l~~~~~~~~~~~lvviD~l~~~~~~~~~~~~~~~~~~~~l~~la~~~~~~vi~ 184 (193)
T PF13481_consen 128 DLEELEAALKELYGPDLVVIDPLQSLHDGDENSNSAVAQLMQELKRLAKEYGVAVIL 184 (193)
T ss_dssp HHHHHHHHHTT----SEEEEE-GGGG--S-TT-HHHHHHHHHHHHHHHHHH--EEEE
T ss_pred HHHHHHHHHhhcCCCcEEEEcCHHHHhcCCCCCHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 46778888775 678999999976543221111 35899999999999987764
No 397
>COG2515 Acd 1-aminocyclopropane-1-carboxylate deaminase [Amino acid transport and metabolism]
Probab=62.18 E-value=1.5e+02 Score=28.46 Aligned_cols=46 Identities=15% Similarity=0.197 Sum_probs=30.9
Q ss_pred EEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCccc
Q 013008 248 AAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTG 296 (451)
Q Consensus 248 aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G 296 (451)
...+.+-..+ +|--.|.+|.++.+..+++..|+ +.|=||+|-...|
T Consensus 244 ~v~~~~dy~~-~~Yg~p~~e~~e~i~~~~~~eGi--llDpVYtgKam~G 289 (323)
T COG2515 244 DVLLSDDYHH-PGYGKPNEEDIEAIKLLARLEGI--LLDPVYTGKAMYG 289 (323)
T ss_pred eEEEEecccC-CccCCcCHHHHHHHHHHHHhhCc--ccccccchHHHHH
Confidence 3333343333 33346899999999999999997 5699998743333
No 398
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=61.89 E-value=22 Score=34.20 Aligned_cols=37 Identities=16% Similarity=0.152 Sum_probs=29.1
Q ss_pred EEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEecc
Q 013008 248 AAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEV 288 (451)
Q Consensus 248 aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv 288 (451)
.+|++....+.+ .+.+++.+|.++|++.|+.+++|-.
T Consensus 131 d~VvlsGSlP~g----~~~d~y~~li~~~~~~g~~vilD~S 167 (310)
T COG1105 131 DIVVLSGSLPPG----VPPDAYAELIRILRQQGAKVILDTS 167 (310)
T ss_pred CEEEEeCCCCCC----CCHHHHHHHHHHHHhcCCeEEEECC
Confidence 346666655543 3788999999999999999999943
No 399
>KOG2433 consensus Uncharacterized conserved protein [Function unknown]
Probab=61.41 E-value=24 Score=34.74 Aligned_cols=93 Identities=19% Similarity=0.231 Sum_probs=59.7
Q ss_pred CCHHHHHHHHHHHhhccc--ccCCCCCHHHHHHHHHHhhccC-CCeEEecCCHHHHHHHHHHHHHHHhhhcCCC------
Q 013008 115 GDADWIKAVVDQANVLTH--VSNMYYSIPQIELAKRLVACSF-ADRVFFSNTGTEANEAAIKFARKFQRHSNPD------ 185 (451)
Q Consensus 115 ~~p~v~~a~~~~~~~~~~--~~~~~~~~~~~~l~~~l~~~~~-~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~------ 185 (451)
.|-+|++|+.+.-++... ++...- ...|+.--|.++++ ..++++++||+|-.+.+-.+|+.|....-+.
T Consensus 434 tHrEiQqaLvdi~DKpA~FVGSrQWI--GStEis~vLn~ll~~~skil~v~sGaEva~~~rELA~HFqt~GTPVMIGGgv 511 (577)
T KOG2433|consen 434 THREIQQALVDIQDKPAKFVGSRQWI--GSTEISFVLNELLKLESKILAVNSGAEVAERVRELARHFQTSGTPVMIGGGV 511 (577)
T ss_pred cHHHHHHHHHhccCcccceeccccee--cchhHHHHHHHHhccceEEEEeccccHHHHHHHHHHHHhhccCCcEEEccce
Confidence 467888888887666432 111111 12344445666667 4489999999999999999998774311100
Q ss_pred -----------CCCCCceEEEEcCCccCChhhhhh
Q 013008 186 -----------SKEPATEFVSFTNSFHGRTMGALA 209 (451)
Q Consensus 186 -----------~~~~~~~ii~~~~~yhg~~~~~~~ 209 (451)
...+.-++++.+|.|-|..+....
T Consensus 512 LAHTIlGVd~n~~TGq~KFLILDPHYTGaeDl~tI 546 (577)
T KOG2433|consen 512 LAHTILGVDFNDTTGQTKFLILDPHYTGAEDLKTI 546 (577)
T ss_pred eeeeEeeeeeecccCceEEEEeCCCcCChhhHHHH
Confidence 013567899999999988765543
No 400
>COG0352 ThiE Thiamine monophosphate synthase [Coenzyme metabolism]
Probab=55.27 E-value=23 Score=32.17 Aligned_cols=88 Identities=22% Similarity=0.262 Sum_probs=49.5
Q ss_pred HHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEecccc---CCCcccccccccccCCC-cce
Q 013008 235 IEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQC---GLGRTGYLWAHEHYGIF-PDI 310 (451)
Q Consensus 235 ~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t---g~gr~G~~~~~~~~~~~-pdi 310 (451)
++.+|++++.+-....+=|-..... .. .+..++++++|++|++.||+++=.- ..+-.|- |.|-. ..+
T Consensus 24 ~~~ve~al~~Gv~~vQlR~K~~~~~---~~-~~~a~~~~~lc~~~~v~liINd~~dlA~~~~AdGV-----HlGq~D~~~ 94 (211)
T COG0352 24 LEWVEAALKGGVTAVQLREKDLSDE---EY-LALAEKLRALCQKYGVPLIINDRVDLALAVGADGV-----HLGQDDMPL 94 (211)
T ss_pred HHHHHHHHhCCCeEEEEecCCCChH---HH-HHHHHHHHHHHHHhCCeEEecCcHHHHHhCCCCEE-----EcCCcccch
Confidence 7889999986544444444432221 11 4667899999999999988876421 1222221 22222 112
Q ss_pred eeecccccCCcccccccccHH
Q 013008 311 MTLAKPLAGGLPIGAALVTEK 331 (451)
Q Consensus 311 ~t~sK~lg~G~~iG~v~~~~~ 331 (451)
....|-++.++.+|+-+-+.+
T Consensus 95 ~~ar~~~~~~~iIG~S~h~~e 115 (211)
T COG0352 95 AEARELLGPGLIIGLSTHDLE 115 (211)
T ss_pred HHHHHhcCCCCEEEeecCCHH
Confidence 233455666677777665543
No 401
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=52.81 E-value=42 Score=31.35 Aligned_cols=56 Identities=13% Similarity=0.233 Sum_probs=37.4
Q ss_pred CHHHHHHhcCCCCeEEEEEccccCCCCc-cccCHHHHHHHHHHHHHhCCEEEEeccccCC
Q 013008 234 NIEATRKLIQPGKTAAVFVEPIQGEGGI-YSATKEFLQFLRDACDDAGALLVFDEVQCGL 292 (451)
Q Consensus 234 d~~~le~~l~~~~~aavi~ep~~~~~G~-~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~ 292 (451)
|+++++++++....-+|+|- .+++.+ .+-+++.+++|..+|..|+++-|+..+| |+
T Consensus 142 dleav~~~iee~g~dcilci--~sttscfapr~pd~leaiaaica~~diphivnnay-gl 198 (432)
T KOG3843|consen 142 DLEAVEAIIEELGEDCILCI--HSTTSCFAPRSPDNLEAIAAICAAHDIPHIVNNAY-GL 198 (432)
T ss_pred hHHHHHHHHHHhCCceEEEE--eecccccCCCCCchHHHHHHHHHccCchhhhcccc-cc
Confidence 78999999873222222221 111111 2345677999999999999999999988 44
No 402
>cd01121 Sms Sms (bacterial radA) DNA repair protein. This protein is not related to archael radA any more than is to other RecA-like NTPases. Sms has a role in recombination and recombinational repair and is responsible for the stabilization or processing of branched DNA molecules.
Probab=51.51 E-value=25 Score=34.99 Aligned_cols=59 Identities=19% Similarity=0.158 Sum_probs=40.0
Q ss_pred eeEeeCCCHHHHHHhcCCCCeEEEEEccccCCC--------CccccCHHHHHHHHHHHHHhCCEEEE
Q 013008 227 VNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEG--------GIYSATKEFLQFLRDACDDAGALLVF 285 (451)
Q Consensus 227 ~~~~~~~d~~~le~~l~~~~~aavi~ep~~~~~--------G~~~~~~~~l~~l~~l~~~~g~llI~ 285 (451)
+..++..+++.+.+.++..++..|++|+++..- |...--.+.+..|.++++++|+.+|+
T Consensus 139 l~l~~e~~le~I~~~i~~~~~~lVVIDSIq~l~~~~~~~~~g~~~qvr~~~~~L~~lak~~~itvil 205 (372)
T cd01121 139 LYLLAETNLEDILASIEELKPDLVIIDSIQTVYSSELTSAPGSVSQVRECTAELMRFAKERNIPIFI 205 (372)
T ss_pred EEEEccCcHHHHHHHHHhcCCcEEEEcchHHhhccccccCCCCHHHHHHHHHHHHHHHHHcCCeEEE
Confidence 334444578888888876678899999986431 21111235567789999999987654
No 403
>COG0108 RibB 3,4-dihydroxy-2-butanone 4-phosphate synthase [Coenzyme metabolism]
Probab=51.33 E-value=21 Score=31.80 Aligned_cols=37 Identities=22% Similarity=0.284 Sum_probs=29.3
Q ss_pred CCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEE
Q 013008 244 PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVF 285 (451)
Q Consensus 244 ~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~ 285 (451)
.-.+++||||-.+..| .... ++++.++|++||+.+|.
T Consensus 154 Gl~Pa~VicEi~~~dG-~mar----~~~~~~fa~~h~l~~it 190 (203)
T COG0108 154 GLKPAGVICEIMNDDG-TMAR----LPELEEFAKEHGLPVIT 190 (203)
T ss_pred CCCCcEEEEEEeCCCc-cccC----hHHHHHHHHHcCCcEEE
Confidence 4467999999887744 4455 78899999999999884
No 404
>PRK06264 cbiC precorrin-8X methylmutase; Validated
Probab=50.26 E-value=2e+02 Score=26.11 Aligned_cols=50 Identities=14% Similarity=0.248 Sum_probs=32.2
Q ss_pred CCcceeeecccccCCccccccccc--HH-HHhhccC-CCccCCCCCcHHHHHHHHHHHHHh
Q 013008 306 IFPDIMTLAKPLAGGLPIGAALVT--EK-VASAINY-GDHGSTFAGSPLVCNAAIAVLDKI 362 (451)
Q Consensus 306 ~~pdi~t~sK~lg~G~~iG~v~~~--~~-i~~~~~~-~~~~~t~~~~~~~~aaa~aal~~~ 362 (451)
+.|.+++ |+|+|||-+. ++ +++.--+ ....++.+|++++.++..+.+..-
T Consensus 152 ~~PalVI-------g~PVGFV~A~ESKe~L~~~~vP~It~~GrkGGS~vAaAivNALl~~~ 205 (210)
T PRK06264 152 IKPKLVV-------GVPVGFVKAAESKEALRNTNIPSISTIGPKGGTPVAVSIINGIIALS 205 (210)
T ss_pred CCCcEEE-------EeCCccccHHHHHHHHHhCCCCEEEEecCCCcHHHHHHHHHHHHHHh
Confidence 5676665 7899998763 33 3321111 134577889999888888777654
No 405
>cd01393 recA_like RecA is a bacterial enzyme which has roles in homologous recombination, DNA repair, and the induction of the SOS response. RecA couples ATP hydrolysis to DNA strand exchange. While prokaryotes have a single RecA protein, eukaryotes have multiple RecA homologs such as Rad51, DMC1 and Rad55/57. Archaea have the RecA-like homologs radA and radB.
Probab=47.54 E-value=1.4e+02 Score=26.83 Aligned_cols=60 Identities=17% Similarity=0.152 Sum_probs=34.9
Q ss_pred CeeEeeCCCHHHHHHhcC-------CCCeEEEEEccccCCCCcc-cc----------CHHHHHHHHHHHHHhCCEEEE
Q 013008 226 GVNFVEYGNIEATRKLIQ-------PGKTAAVFVEPIQGEGGIY-SA----------TKEFLQFLRDACDDAGALLVF 285 (451)
Q Consensus 226 ~~~~~~~~d~~~le~~l~-------~~~~aavi~ep~~~~~G~~-~~----------~~~~l~~l~~l~~~~g~llI~ 285 (451)
++.++...+.+++...+. ..++..|++|++..--... .. -..++..|..+|+++++.+|+
T Consensus 87 ~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvVIDsis~l~~~~~~~~~~~~~~~~~l~~~~~~L~~~a~~~~~~vi~ 164 (226)
T cd01393 87 NIYVARPYNGEQQLEIVEELERIMSSGRVDLVVVDSVAALFRKEFIGRGMLAERARLLSQALRKLLRLADKFNVAVVF 164 (226)
T ss_pred cEEEEeCCCHHHHHHHHHHHHHHhhcCCeeEEEEcCcchhhhhhhcCCchHHHHHHHHHHHHHHHHHHHHHhCcEEEE
Confidence 344444445554443332 4578899999975421000 00 123456789999999987775
No 406
>PLN02672 methionine S-methyltransferase
Probab=47.30 E-value=1.4e+02 Score=34.24 Aligned_cols=114 Identities=18% Similarity=0.080 Sum_probs=59.1
Q ss_pred CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhc--cCCCCcCCCCcCCCCCeeEeeC
Q 013008 155 ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALAL--TSKEHYRSPFEPVMPGVNFVEY 232 (451)
Q Consensus 155 ~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 232 (451)
.+.|++++|-..|++.++++-- ++--++--.-+-|-...+..++ -+.. ...+....+..+..
T Consensus 449 ~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 512 (1082)
T PLN02672 449 PDNVVVFPSRAVAIENALRLFS------------PRLAIVDEHLTRWLPKKWLTSLAIENAT----SDSKSDDVITVIEA 512 (1082)
T ss_pred ccceEEeccHHHHHHHHHHhhC------------hHHHhhhhhhhccCCHHHHhHhhhhccc----ccCccCCeEEEEeC
Confidence 7899999999999999998432 1111111111111111111111 1111 11111122222221
Q ss_pred C-CHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEecc
Q 013008 233 G-NIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEV 288 (451)
Q Consensus 233 ~-d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv 288 (451)
+ .-+.+.+++++-++..|++---..+. -+..-++.|...|++-|+.|+.|+.
T Consensus 513 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 565 (1082)
T PLN02672 513 PRQSDLVIELIKKLKPQVVVTGMADFEM----RTSTAFEHLLNVTAEIGARLFLDIS 565 (1082)
T ss_pred CCcchHHHHHHHhCCCeEEEEeccchhh----hhHHHHHHHHHHHHhhCcEEEEehh
Confidence 1 22345566654455666654433332 2334489999999999999999986
No 407
>PRK08285 cobH precorrin-8X methylmutase; Reviewed
Probab=45.24 E-value=1.8e+02 Score=26.41 Aligned_cols=48 Identities=21% Similarity=0.285 Sum_probs=30.7
Q ss_pred CCcceeeecccccCCccccccccc--H-HHHh-h--ccCCCccCCCCCcHHHHHHHHHHHH
Q 013008 306 IFPDIMTLAKPLAGGLPIGAALVT--E-KVAS-A--INYGDHGSTFAGSPLVCNAAIAVLD 360 (451)
Q Consensus 306 ~~pdi~t~sK~lg~G~~iG~v~~~--~-~i~~-~--~~~~~~~~t~~~~~~~~aaa~aal~ 360 (451)
+.|.+++ |+|+|||-+. + .+.+ . +......++.+|++++.++..+.++
T Consensus 152 ~~PalVI-------G~PVGFV~a~ESKe~L~~~~~~vP~I~~~GrkGGS~vAaAivNALl~ 205 (208)
T PRK08285 152 PRPAAIL-------GFPVGFVGAAESKDALAADSRGVPYLIVRGRRGGSAMAAAAVNALAS 205 (208)
T ss_pred CCCCEEE-------EeCCccccHHHHHHHHHhccCCCCEEEEecCCCcHHHHHHHHHHHhc
Confidence 5677666 7899999763 3 3433 1 1112345778899988877776654
No 408
>PRK05953 precorrin-8X methylmutase; Validated
Probab=42.36 E-value=2.6e+02 Score=25.27 Aligned_cols=47 Identities=11% Similarity=0.145 Sum_probs=30.6
Q ss_pred CCcceeeecccccCCccccccccc--HH-HHhh-ccCCCccCCCCCcHHHHHHHHHHH
Q 013008 306 IFPDIMTLAKPLAGGLPIGAALVT--EK-VASA-INYGDHGSTFAGSPLVCNAAIAVL 359 (451)
Q Consensus 306 ~~pdi~t~sK~lg~G~~iG~v~~~--~~-i~~~-~~~~~~~~t~~~~~~~~aaa~aal 359 (451)
+.|.+++ |+|+|||-+. ++ +.+. +......++.+|+|++.++..+.+
T Consensus 144 ~~PalVI-------G~PVGFV~AaESKe~L~~~~vP~It~~GrkGGS~vAaA~vNALl 194 (208)
T PRK05953 144 IRPALVI-------ATPAGFIDADDAKERLQDSLVPHITIDGRKGGAVVAVAIIDGLV 194 (208)
T ss_pred CCCCEEE-------EeCCcccCcHHHHHHHHhCCCCEEEEeCCCCcHHHHHHHHHHHH
Confidence 5676665 7899999763 23 3221 111134577889999888887777
No 409
>PRK08025 lipid A biosynthesis palmitoleoyl acyltransferase; Reviewed
Probab=40.83 E-value=1.1e+02 Score=29.51 Aligned_cols=21 Identities=10% Similarity=0.167 Sum_probs=14.5
Q ss_pred CceEEEEcCCccCChhhhhhc
Q 013008 190 ATEFVSFTNSFHGRTMGALAL 210 (451)
Q Consensus 190 ~~~ii~~~~~yhg~~~~~~~~ 210 (451)
+..+|+..+.+-++...+..+
T Consensus 123 gkgvI~lt~H~GnwE~~~~~l 143 (305)
T PRK08025 123 NRGVMVVGVHFMSLELGGRVM 143 (305)
T ss_pred CCCEEEEecchhHHHHHHHHH
Confidence 556888888887776655443
No 410
>PF06153 DUF970: Protein of unknown function (DUF970); InterPro: IPR010375 This is a family of uncharacterised bacterial proteins.; PDB: 3M05_A.
Probab=38.02 E-value=48 Score=26.61 Aligned_cols=55 Identities=27% Similarity=0.382 Sum_probs=35.8
Q ss_pred EEEEecCChHHHHHHHHHCCceee----ecCC---CCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 013008 388 IGIEFDVSATPVVDACRDSGLLVL----TAGK---GNVVRLVPPLIISEQELDQAVEILCKTLPV 445 (451)
Q Consensus 388 ~~~~~~~~~~~~~~~l~~~Gv~~~----~~~~---~~~iri~~~~~~t~e~i~~~l~~l~~~l~~ 445 (451)
+.+.-+.++..+.++|.++|+.+. .+|. |+.-- -..+.+|++++.++.|++..++
T Consensus 5 iaIVqd~Da~~l~~~L~~~g~~~TkLsstGGFLr~GNtTl---liGvede~v~~vl~iIk~~c~~ 66 (109)
T PF06153_consen 5 IAIVQDEDADDLSDALNENGFRVTKLSSTGGFLREGNTTL---LIGVEDEKVDEVLEIIKENCKK 66 (109)
T ss_dssp EEEEEHHHHHHHHHHHHHTT--EEEEEEEETTTTEEEEEE---EEEEEGGGHHHHHHHHHHHH--
T ss_pred EEEEcHhhHHHHHHHHHHCCceEEEEecccceeccCCEEE---EEEecHHHHHHHHHHHHHhhcC
Confidence 344335678889999999999765 2333 23221 2367899999999999998764
No 411
>cd00984 DnaB_C DnaB helicase C terminal domain. The hexameric helicase DnaB unwinds the DNA duplex at the chromosome replication fork. Although the mechanism by which DnaB both couples ATP hydrolysis to translocation along DNA and denatures the duplex is unknown, a change in the quaternary structure of the protein involving dimerization of the N-terminal domain has been observed and may occur during the enzymatic cycle. This C-terminal domain contains an ATP-binding site and is therefore probably the site of ATP hydrolysis.
Probab=37.72 E-value=67 Score=29.39 Aligned_cols=52 Identities=8% Similarity=0.083 Sum_probs=33.2
Q ss_pred CHHHHHHhcC----CCCeEEEEEccccCCC-CccccCH-----HHHHHHHHHHHHhCCEEEE
Q 013008 234 NIEATRKLIQ----PGKTAAVFVEPIQGEG-GIYSATK-----EFLQFLRDACDDAGALLVF 285 (451)
Q Consensus 234 d~~~le~~l~----~~~~aavi~ep~~~~~-G~~~~~~-----~~l~~l~~l~~~~g~llI~ 285 (451)
+++.+++.+. ..++..|++|+++... +....+. .+++.|.++|+++|+.+|+
T Consensus 107 ~~~~l~~~i~~~~~~~~~~~vvID~l~~l~~~~~~~~~~~~~~~~~~~L~~la~~~~~~ii~ 168 (242)
T cd00984 107 TVSDIRSRARRLKKEHGLGLIVIDYLQLMSGSKKKGNRQQEVAEISRSLKLLAKELNVPVIA 168 (242)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCchhcCCCCCCCCHHHHHHHHHHHHHHHHHHhCCeEEE
Confidence 4455554443 4478899999986432 1101111 4578899999999998875
No 412
>cd01020 TroA_b Metal binding protein TroA_b. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=37.55 E-value=92 Score=29.24 Aligned_cols=43 Identities=21% Similarity=0.286 Sum_probs=30.4
Q ss_pred CHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEE
Q 013008 234 NIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLV 284 (451)
Q Consensus 234 d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI 284 (451)
++..|.+.++..++.+|++||..+. ...+.|.+++++.|+.++
T Consensus 194 ~l~~l~~~ik~~~v~~if~e~~~~~--------k~~~~l~~la~~~~~~v~ 236 (264)
T cd01020 194 DIAAFQNAIKNRQIDALIVNPQQAS--------SATTNITGLAKRSGVPVV 236 (264)
T ss_pred HHHHHHHHHHhCCCCEEEeCCCCCc--------HHHHHHHHHHHHcCCCEE
Confidence 4566666666778899999987543 225667788888888764
No 413
>PRK13601 putative L7Ae-like ribosomal protein; Provisional
Probab=36.45 E-value=59 Score=24.58 Aligned_cols=49 Identities=16% Similarity=0.291 Sum_probs=34.0
Q ss_pred HHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCC
Q 013008 236 EATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGL 292 (451)
Q Consensus 236 ~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~ 292 (451)
+...+.++.++...||+-.. .++...+.+..+|++++++++.......+
T Consensus 14 ~~vlkaIk~gkakLViiA~D--------a~~~~~k~i~~~c~~~~Vpv~~~~t~~eL 62 (82)
T PRK13601 14 KQTLKAITNCNVLQVYIAKD--------AEEHVTKKIKELCEEKSIKIVYIDTMKEL 62 (82)
T ss_pred HHHHHHHHcCCeeEEEEeCC--------CCHHHHHHHHHHHHhCCCCEEEeCCHHHH
Confidence 44555666567777777443 24566899999999999999866554434
No 414
>COG1435 Tdk Thymidine kinase [Nucleotide transport and metabolism]
Probab=35.81 E-value=3e+02 Score=24.76 Aligned_cols=40 Identities=15% Similarity=0.272 Sum_probs=31.5
Q ss_pred eEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCC
Q 013008 247 TAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGL 292 (451)
Q Consensus 247 ~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~ 292 (451)
+.+|++|-.| ..+++....|.+++++.|+++|+=---+.|
T Consensus 83 ~~~v~IDEaQ------F~~~~~v~~l~~lad~lgi~Vi~~GL~~DF 122 (201)
T COG1435 83 VDCVLIDEAQ------FFDEELVYVLNELADRLGIPVICYGLDTDF 122 (201)
T ss_pred cCEEEEehhH------hCCHHHHHHHHHHHhhcCCEEEEecccccc
Confidence 6788888775 568888999999999999999976443333
No 415
>TIGR02237 recomb_radB DNA repair and recombination protein RadB. This family consists exclusively of archaeal RadB protein, a homolog of bacterial RecA (TIGR02012), eukaryotic RAD51 (TIGR02239) and DMC1 (TIGR02238), and archaeal RadA (TIGR02236).
Probab=35.80 E-value=2.2e+02 Score=25.19 Aligned_cols=53 Identities=19% Similarity=0.164 Sum_probs=30.0
Q ss_pred HHHhcCCCCeEEEEEccccCCC-CccccC--------HHHHHHHHHHHHHhCCEEEE-ecccc
Q 013008 238 TRKLIQPGKTAAVFVEPIQGEG-GIYSAT--------KEFLQFLRDACDDAGALLVF-DEVQC 290 (451)
Q Consensus 238 le~~l~~~~~aavi~ep~~~~~-G~~~~~--------~~~l~~l~~l~~~~g~llI~-DEv~t 290 (451)
+.+.+....+..|++|++..-- ...... .+.+..|.++++++|+.+++ .++.+
T Consensus 89 l~~~~~~~~~~lvVIDSis~l~~~~~~~~~~~~~~~l~~~~~~L~~~~~~~~v~vl~t~~~~~ 151 (209)
T TIGR02237 89 TSKFIDRDSASLVVVDSFTALYRLELSDDRISRNRELARQLTLLLSLARKKNLAVVITNQVYT 151 (209)
T ss_pred HHHHHhhcCccEEEEeCcHHHhHHHhCCccHHHHHHHHHHHHHHHHHHHHcCCEEEEEcccEE
Confidence 3444444468899999986421 000111 12345578888999987664 44443
No 416
>PRK11823 DNA repair protein RadA; Provisional
Probab=35.65 E-value=70 Score=32.75 Aligned_cols=57 Identities=23% Similarity=0.236 Sum_probs=38.0
Q ss_pred EeeCCCHHHHHHhcCCCCeEEEEEccccCCC--------CccccCHHHHHHHHHHHHHhCCEEEE
Q 013008 229 FVEYGNIEATRKLIQPGKTAAVFVEPIQGEG--------GIYSATKEFLQFLRDACDDAGALLVF 285 (451)
Q Consensus 229 ~~~~~d~~~le~~l~~~~~aavi~ep~~~~~--------G~~~~~~~~l~~l~~l~~~~g~llI~ 285 (451)
.....+++.+.+.++..++..|++|+++..- |....-.+.+..|.++++++|+.++.
T Consensus 139 ~~~e~~l~~i~~~i~~~~~~lVVIDSIq~l~~~~~~~~~g~~~qvr~~~~~L~~~ak~~~itvil 203 (446)
T PRK11823 139 LLAETNLEAILATIEEEKPDLVVIDSIQTMYSPELESAPGSVSQVRECAAELMRLAKQRGIAVFL 203 (446)
T ss_pred EeCCCCHHHHHHHHHhhCCCEEEEechhhhccccccCCCCCHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 3344578888888876678899999986431 11111134556789999999986554
No 417
>PRK05954 precorrin-8X methylmutase; Provisional
Probab=35.30 E-value=3.4e+02 Score=24.49 Aligned_cols=48 Identities=23% Similarity=0.297 Sum_probs=30.2
Q ss_pred CCcceeeecccccCCccccccccc--HH-HHhhccC-CCccCCCCCcHHHHHHHHHHHH
Q 013008 306 IFPDIMTLAKPLAGGLPIGAALVT--EK-VASAINY-GDHGSTFAGSPLVCNAAIAVLD 360 (451)
Q Consensus 306 ~~pdi~t~sK~lg~G~~iG~v~~~--~~-i~~~~~~-~~~~~t~~~~~~~~aaa~aal~ 360 (451)
+.|.+++ |+|+|++-+. ++ +.+.--+ ....++.+|++++.++..+.+.
T Consensus 146 ~~PalVI-------g~PVGFV~A~ESKe~L~~~~iP~It~~GrkGGS~vAaAivNALl~ 197 (203)
T PRK05954 146 VKPSLVI-------GVPVGFVSVVEAKQALAQLDVPQIRVEGRKGGSPVAAAIVNALLI 197 (203)
T ss_pred CCCCEEE-------EECCcccCHHHHHHHHHhCCCCEEEEecCCCcHHHHHHHHHHHHH
Confidence 5676665 7899998763 23 3221111 1345678899998888777664
No 418
>PRK13602 putative ribosomal protein L7Ae-like; Provisional
Probab=34.95 E-value=1.2e+02 Score=22.82 Aligned_cols=49 Identities=14% Similarity=0.138 Sum_probs=33.6
Q ss_pred HHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCC
Q 013008 236 EATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGL 292 (451)
Q Consensus 236 ~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~ 292 (451)
+...+.|+.++...|++-..- ++...+.+..+|++++++++.-+....+
T Consensus 17 ~~v~kai~~gkaklViiA~D~--------~~~~~~~i~~~c~~~~Vp~~~~~s~~eL 65 (82)
T PRK13602 17 KQTVKALKRGSVKEVVVAEDA--------DPRLTEKVEALANEKGVPVSKVDSMKKL 65 (82)
T ss_pred HHHHHHHHcCCeeEEEEECCC--------CHHHHHHHHHHHHHcCCCEEEECCHHHH
Confidence 455666666677777774432 3356899999999999999866543333
No 419
>TIGR00416 sms DNA repair protein RadA. The gene protuct codes for a probable ATP-dependent protease involved in both DNA repair and degradation of proteins, peptides, glycopeptides. Also known as sms. Residues 11-28 of the SEED alignment contain a putative Zn binding domain. Residues 110-117 of the seed contain a putative ATP binding site both documented in Haemophilus and in Listeria monocytogenes. for E.coli see ( J. BACTERIOL. 178:5045-5048(1996)).
Probab=34.74 E-value=67 Score=32.97 Aligned_cols=57 Identities=19% Similarity=0.138 Sum_probs=38.0
Q ss_pred eEeeCCCHHHHHHhcCCCCeEEEEEccccCCC--------CccccCHHHHHHHHHHHHHhCCEEE
Q 013008 228 NFVEYGNIEATRKLIQPGKTAAVFVEPIQGEG--------GIYSATKEFLQFLRDACDDAGALLV 284 (451)
Q Consensus 228 ~~~~~~d~~~le~~l~~~~~aavi~ep~~~~~--------G~~~~~~~~l~~l~~l~~~~g~llI 284 (451)
..+...+++.+.+.++..+...|++|+++..- |...--.+++..|.++++++|+.++
T Consensus 152 ~~~~e~~~~~I~~~i~~~~~~~vVIDSIq~l~~~~~~~~~g~~~q~r~~~~~L~~~ak~~giTvl 216 (454)
T TIGR00416 152 YVLSETNWEQICANIEEENPQACVIDSIQTLYSPDISSAPGSVSQVRECTAELMRLAKTRGIAIF 216 (454)
T ss_pred EEcCCCCHHHHHHHHHhcCCcEEEEecchhhcccccccCCCCHHHHHHHHHHHHHHHHHhCCEEE
Confidence 33444578888888876678899999987531 2111123456678899999997444
No 420
>cd01123 Rad51_DMC1_radA Rad51_DMC1_radA,B. This group of recombinases includes the eukaryotic proteins RAD51, RAD55/57 and the meiosis-specific protein DMC1, and the archaeal proteins radA and radB. They are closely related to the bacterial RecA group. Rad51 proteins catalyze a similiar recombination reaction as RecA, using ATP-dependent DNA binding activity and a DNA-dependent ATPase. However, this reaction is less efficient and requires accessory proteins such as RAD55/57 .
Probab=34.68 E-value=51 Score=30.03 Aligned_cols=52 Identities=13% Similarity=0.266 Sum_probs=31.3
Q ss_pred HHHhcCCC-CeEEEEEccccCCCC-ccccC----------HHHHHHHHHHHHHhCCEEEE-eccc
Q 013008 238 TRKLIQPG-KTAAVFVEPIQGEGG-IYSAT----------KEFLQFLRDACDDAGALLVF-DEVQ 289 (451)
Q Consensus 238 le~~l~~~-~~aavi~ep~~~~~G-~~~~~----------~~~l~~l~~l~~~~g~llI~-DEv~ 289 (451)
+++.+... ++..|++|++..--. ..... .+++..|..+|+++++.+++ .++.
T Consensus 106 l~~~l~~~~~~~liVIDSis~~~~~~~~~~~~~~~r~~~l~~~~~~L~~la~~~~~avl~tn~~~ 170 (235)
T cd01123 106 LEAILIESSRIKLVIVDSVTALFRAEFDGRGELAERQQHLAKLLRTLKRLADEFNVAVVITNQVT 170 (235)
T ss_pred HHHHHhhcCCeeEEEEeCcHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHhCCEEEEeccEe
Confidence 34444444 899999999854210 00011 24567788899999986663 4443
No 421
>COG1066 Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=34.65 E-value=82 Score=31.69 Aligned_cols=57 Identities=18% Similarity=0.166 Sum_probs=41.4
Q ss_pred eEeeCCCHHHHHHhcCCCCeEEEEEccccCC--------CCccccCHHHHHHHHHHHHHhCCEEE
Q 013008 228 NFVEYGNIEATRKLIQPGKTAAVFVEPIQGE--------GGIYSATKEFLQFLRDACDDAGALLV 284 (451)
Q Consensus 228 ~~~~~~d~~~le~~l~~~~~aavi~ep~~~~--------~G~~~~~~~~l~~l~~l~~~~g~llI 284 (451)
..++..|++++.+.++..++..+++|++|.. +|.+.--++--.+|.++|+++|+.++
T Consensus 150 ~l~aEt~~e~I~~~l~~~~p~lvVIDSIQT~~s~~~~SapGsVsQVRe~t~~L~~~AK~~~i~~f 214 (456)
T COG1066 150 YLLAETNLEDIIAELEQEKPDLVVIDSIQTLYSEEITSAPGSVSQVREVAAELMRLAKTKNIAIF 214 (456)
T ss_pred EEehhcCHHHHHHHHHhcCCCEEEEeccceeecccccCCCCcHHHHHHHHHHHHHHHHHcCCeEE
Confidence 3344458899988888778889999987642 24443345667778999999998765
No 422
>TIGR01305 GMP_reduct_1 guanosine monophosphate reductase, eukaryotic. A deep split separates two families of GMP reductase. This family includes both eukaryotic and some proteobacterial sequences, while the other family contains other bacterial sequences.
Probab=34.55 E-value=3.3e+02 Score=26.73 Aligned_cols=117 Identities=20% Similarity=0.248 Sum_probs=57.5
Q ss_pred CceEEEEcCCccCChhhhhhccCCCCcCCCCcCCCCCeeEee--CCCHHHHHHhcCCCCeEEEEEc--c-----ccCCCC
Q 013008 190 ATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVE--YGNIEATRKLIQPGKTAAVFVE--P-----IQGEGG 260 (451)
Q Consensus 190 ~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~d~~~le~~l~~~~~aavi~e--p-----~~~~~G 260 (451)
+-++|+.|- -||+....+..-. ..+..+ |+...+. --+.+..+++++.. ..+|.+- | ..-..|
T Consensus 121 ~~d~iviD~-AhGhs~~~i~~ik--~ir~~~----p~~~viaGNV~T~e~a~~Li~aG-AD~ikVgiGpGSicttR~~~G 192 (343)
T TIGR01305 121 QLKFICLDV-ANGYSEHFVEFVK--LVREAF----PEHTIMAGNVVTGEMVEELILSG-ADIVKVGIGPGSVCTTRTKTG 192 (343)
T ss_pred CCCEEEEEC-CCCcHHHHHHHHH--HHHhhC----CCCeEEEecccCHHHHHHHHHcC-CCEEEEcccCCCcccCceeCC
Confidence 345777764 4788766554221 111111 1221111 12677777777632 2244332 2 111223
Q ss_pred ccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccccccccccCCCcceeeecccccC
Q 013008 261 IYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAG 319 (451)
Q Consensus 261 ~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~~~~~~~~~pdi~t~sK~lg~ 319 (451)
.-.|...-+.++++.++++++.+|.|. |+-+.|.- ...+..-.|.+-+|.-++|
T Consensus 193 vg~pqltAv~~~a~aa~~~~v~VIaDG---GIr~~gDI--~KALA~GAd~VMlG~llAG 246 (343)
T TIGR01305 193 VGYPQLSAVIECADAAHGLKGHIISDG---GCTCPGDV--AKAFGAGADFVMLGGMFAG 246 (343)
T ss_pred CCcCHHHHHHHHHHHhccCCCeEEEcC---CcCchhHH--HHHHHcCCCEEEECHhhhC
Confidence 333565667777777778899999994 34233321 1222334566666544443
No 423
>cd01422 MGS Methylglyoxal synthase catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The first part of the catalytic mechanism is believed to be similar to TIM (triosephosphate isomerase) in that both enzymes utilize DHAP to form an ene-diolate phosphate intermediate. In MGS, the second catalytic step is characterized by the elimination of phosphate and collapse of the enediolate to form methylglyoxal instead of reprotonation to form the isomer glyceraldehyde 3-phosphate, as in TIM. This is the first reaction in the methylglyoxal bypass of the Embden-Myerhoff glycolytic pathway and is believed to provide physiological benefits under non-ideal growth conditions in bacteria.
Probab=34.28 E-value=97 Score=24.99 Aligned_cols=45 Identities=20% Similarity=0.091 Sum_probs=31.6
Q ss_pred HHHHhcCCCCeEEEEEcccc-CCCCccccCHHHHHHHHHHHHHhCCEEEE
Q 013008 237 ATRKLIQPGKTAAVFVEPIQ-GEGGIYSATKEFLQFLRDACDDAGALLVF 285 (451)
Q Consensus 237 ~le~~l~~~~~aavi~ep~~-~~~G~~~~~~~~l~~l~~l~~~~g~llI~ 285 (451)
.+.+.+..+++.+||..|.. +..+. ...-..|++.|-+|+++++.
T Consensus 61 ~i~~~i~~g~i~~VInt~~~~~~~~~----~~dg~~iRr~a~~~~Ip~~T 106 (115)
T cd01422 61 QIGALIAEGEIDAVIFFRDPLTAQPH----EPDVKALLRLCDVYNIPLAT 106 (115)
T ss_pred HHHHHHHcCceeEEEEcCCCCCCCcc----cccHHHHHHHHHHcCCCEEE
Confidence 35556667789999888764 43321 22266899999999999874
No 424
>PF07505 Gp37_Gp68: Phage protein Gp37/Gp68; InterPro: IPR011101 This entry is represented by Burkholderia phage phiE125, Gp37. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches.
Probab=34.18 E-value=1.1e+02 Score=28.77 Aligned_cols=39 Identities=26% Similarity=0.457 Sum_probs=29.3
Q ss_pred eEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEe
Q 013008 247 TAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFD 286 (451)
Q Consensus 247 ~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~D 286 (451)
+--||+=.-.|. +.+++.+++.+.|++-|+++|+.+.+=
T Consensus 189 IdWVIvGGESG~-~ARp~~~~Wvr~irdqC~~~gvpFffK 227 (261)
T PF07505_consen 189 IDWVIVGGESGP-GARPMHPDWVRSIRDQCAAAGVPFFFK 227 (261)
T ss_pred CCEEEECCCcCC-CCCcCCHHHHHHHHHHHHHcCCcEEEE
Confidence 445555443333 357889999999999999999999865
No 425
>PF00926 DHBP_synthase: 3,4-dihydroxy-2-butanone 4-phosphate synthase; InterPro: IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase (4.1.99.12 from EC) (DHBP synthase) (RibB) catalyses the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate, the latter serving as the biosynthetic precursor for the xylene ring of riboflavin []. In Photobacterium leiognathi, the riboflavin synthesis genes ribB (DHBP synthase), ribE (riboflavin synthase), ribH (lumazone synthase) and ribA (GTP cyclohydrolase II) all reside in the lux operon []. RibB is sometimes found as a bifunctional enzyme with GTP cyclohydrolase II that catalyses the first committed step in the biosynthesis of riboflavin (IPR000926 from INTERPRO). No sequences with significant homology to DHBP synthase are found in the metazoa.; GO: 0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity, 0009231 riboflavin biosynthetic process; PDB: 1K4O_A 1K4L_A 1K4P_A 1K49_A 1K4I_A 1TKU_A 1TKS_B 2RIS_A 2RIU_A 3MIO_A ....
Probab=33.74 E-value=65 Score=28.82 Aligned_cols=37 Identities=19% Similarity=0.145 Sum_probs=27.9
Q ss_pred CCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEE
Q 013008 244 PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVF 285 (451)
Q Consensus 244 ~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~ 285 (451)
.-..+++|+|=+.- .|.... ++++.+++++||+.+|.
T Consensus 150 Gl~p~avi~eil~~-dG~~~~----~~~~~~fA~~~~l~~vs 186 (194)
T PF00926_consen 150 GLSPVAVICEILDD-DGDMAR----RDELEEFAKKHGLPIVS 186 (194)
T ss_dssp TS-SBEEEEEBBET-TSSBHC----HHHHHHHHHHTT-EEEE
T ss_pred CCCCcEEEEEEeCC-CCCcCC----HHHHHHHHHHcCCcEEE
Confidence 44678999998866 555555 88899999999999984
No 426
>PRK10785 maltodextrin glucosidase; Provisional
Probab=33.10 E-value=85 Score=33.51 Aligned_cols=57 Identities=21% Similarity=0.271 Sum_probs=40.7
Q ss_pred CHHHHHHhcC---CCCeEEEEEccccCCCCcc-------------ccCHHHHHHHHHHHHHhCCEEEEecccc
Q 013008 234 NIEATRKLIQ---PGKTAAVFVEPIQGEGGIY-------------SATKEFLQFLRDACDDAGALLVFDEVQC 290 (451)
Q Consensus 234 d~~~le~~l~---~~~~aavi~ep~~~~~G~~-------------~~~~~~l~~l~~l~~~~g~llI~DEv~t 290 (451)
|++.+.+.|. .-.+-+|.+.|++...+.- .-+.+.+++|++-|+++|+-||.|=|..
T Consensus 177 Dl~GI~~kLdYL~~LGv~~I~L~Pif~s~s~hgYd~~Dy~~iDp~~Gt~~df~~Lv~~aH~rGikVilD~V~N 249 (598)
T PRK10785 177 DLDGISEKLPYLKKLGVTALYLNPIFTAPSVHKYDTEDYRHVDPQLGGDAALLRLRHATQQRGMRLVLDGVFN 249 (598)
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCCcccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEECCC
Confidence 6666655554 3367889999986553210 1134679999999999999999999953
No 427
>PF12138 Spherulin4: Spherulation-specific family 4; InterPro: IPR021986 This protein is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 250 and 398 amino acids in length. There is a conserved NPG sequence motif and there are two completely conserved G residues that may be functionally important. Starvation will often induce spherulation - the production of spores - and this process may involve DNA-methylation. Changes in the methylation of spherulin4 are associated with the formation of spherules, but these changes are probably transient. Methylation of the gene accompanies its transcriptional activation, and spherulin4 mRNA is only detectable in late spherulating cultures and mature spherules. It is a spherulation-specific protein.
Probab=32.94 E-value=98 Score=28.98 Aligned_cols=50 Identities=14% Similarity=0.189 Sum_probs=37.4
Q ss_pred HHHHHHhcC--CCCeEEEEEccccCCCCc--cccCHHHHHHHHHHHHHhCCEEE
Q 013008 235 IEATRKLIQ--PGKTAAVFVEPIQGEGGI--YSATKEFLQFLRDACDDAGALLV 284 (451)
Q Consensus 235 ~~~le~~l~--~~~~aavi~ep~~~~~G~--~~~~~~~l~~l~~l~~~~g~llI 284 (451)
.+.|.+++. +...-.+|++|.+|+|.. -.++..|..+|.+|-+.-|+.+|
T Consensus 18 W~~l~~a~~~~p~~~f~vIiNP~sGPG~~~~~~pd~~Y~~~i~~L~~~~nv~vl 71 (253)
T PF12138_consen 18 WDPLYDAIAAHPSVPFTVIINPNSGPGSAPDPWPDANYAAAIPRLNSYANVRVL 71 (253)
T ss_pred hHHHHHHHhcCCCCcEEEEEcCCCCCCCCCCCCCCHHHHHHHHHHHhcCCCcEE
Confidence 456666665 334568999999998843 34899999999999777777766
No 428
>TIGR00789 flhB_rel flhB C-terminus-related protein. This model describes a short protein (80-93 residues) homologous to the C-terminus of the flagellar biosynthetic protein FlhB. It is found so far only in species that also have FlhB. In a phylogenetic tree based on alignment of both this family and the homologous region of FlhB and its homologs, the members of this family form a monophyletic set.
Probab=32.78 E-value=34 Score=25.88 Aligned_cols=23 Identities=13% Similarity=0.088 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHhCCEEEEecccc
Q 013008 268 FLQFLRDACDDAGALLVFDEVQC 290 (451)
Q Consensus 268 ~l~~l~~l~~~~g~llI~DEv~t 290 (451)
.-++|+++++++|++++.|....
T Consensus 28 ~A~~I~~~A~e~~VPi~~~~~LA 50 (82)
T TIGR00789 28 VAERIIEIAKKHGIPIVEDPDLV 50 (82)
T ss_pred HHHHHHHHHHHcCCCEEeCHHHH
Confidence 36789999999999999998753
No 429
>COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]
Probab=32.74 E-value=95 Score=29.77 Aligned_cols=53 Identities=17% Similarity=0.274 Sum_probs=40.3
Q ss_pred HHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCC
Q 013008 235 IEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLG 293 (451)
Q Consensus 235 ~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~g 293 (451)
.+++++.+.+.....+.+.|.... ..+++..+..+-+.|+++|+++++ |+|.+
T Consensus 115 ~~E~er~v~~~gf~g~~l~p~~~~---~~~~~~~~~pi~~~a~~~gvpv~i---htG~~ 167 (293)
T COG2159 115 AEELERRVRELGFVGVKLHPVAQG---FYPDDPRLYPIYEAAEELGVPVVI---HTGAG 167 (293)
T ss_pred HHHHHHHHHhcCceEEEecccccC---CCCCChHHHHHHHHHHHcCCCEEE---EeCCC
Confidence 456777776667888899886544 245666689999999999999998 77653
No 430
>cd01169 HMPP_kinase 4-amino-5-hydroxymethyl-2-methyl-pyrimidine phosphate kinase (HMPP-kinase) catalyzes two consecutive phosphorylation steps in the thiamine phosphate biosynthesis pathway, leading to the synthesis of vitamin B1. The first step is the phosphorylation of the hydroxyl group of HMP to form 4-amino-5-hydroxymethyl-2-methyl-pyrimidine phosphate (HMP-P) and then the phophorylation of HMP-P to form 4-amino-5-hydroxymethyl-2-methyl-pyrimidine pyrophosphate (HMP-PP), which is the substrate for the thiamine synthase coupling reaction.
Probab=32.41 E-value=74 Score=29.10 Aligned_cols=44 Identities=18% Similarity=0.265 Sum_probs=31.6
Q ss_pred HHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHh-CCEEEEeccc
Q 013008 238 TRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDA-GALLVFDEVQ 289 (451)
Q Consensus 238 le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~-g~llI~DEv~ 289 (451)
++.+++..++.+|.+ | ...+++..+.+.++++++ ++++++|=+.
T Consensus 60 l~~~~~~~~~~~i~~-------G-~l~~~~~~~~i~~~~~~~~~~~vv~Dpv~ 104 (242)
T cd01169 60 LDAVLEDIPVDAIKI-------G-MLGSAEIIEAVAEALKDYPDIPVVLDPVM 104 (242)
T ss_pred HHHHHhCCCCCEEEE-------C-CCCCHHHHHHHHHHHHhCCCCcEEECCce
Confidence 333333335666666 3 345788899999999998 9999999775
No 431
>TIGR00506 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase. Several members of the family are bifunctional, involving both ribA and ribB function. In these cases, ribA tends to be on the C-terminal end of the protein and ribB tends to be on the N-terminal.
Probab=31.88 E-value=74 Score=28.60 Aligned_cols=36 Identities=19% Similarity=0.148 Sum_probs=28.2
Q ss_pred CCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEE
Q 013008 245 GKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVF 285 (451)
Q Consensus 245 ~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~ 285 (451)
-..+++|||=+.. .|.... ++++.++|++||+.+|.
T Consensus 156 l~p~~vicEil~~-dG~m~~----~~~~~~fA~~~~l~~is 191 (199)
T TIGR00506 156 LKPAGVICEMMND-DGTMAR----KPELMEYAKKHNLKLIS 191 (199)
T ss_pred CCceEEEEEEeCC-CCCccC----HHHHHHHHHHcCCcEEE
Confidence 3468999998765 455555 88899999999999974
No 432
>TIGR03573 WbuX N-acetyl sugar amidotransferase. This enzyme has been implicated in the formation of the acetamido moiety (sugar-NC(=NH)CH3) which is found on some exopolysaccharides and is positively charged at neutral pH. The reaction involves ligation of ammonia with a sugar N-acetyl group, displacing water. In E. coli (O145 strain) and Pseudomonas aeruginosa (O12 strain) this gene is known as wbuX and ifnA respectively and likely acts on sialic acid. In Campylobacter jejuni, the gene is known as pseA and acts on pseudaminic acid in the process of flagellin glycosylation. In other Pseudomonas strains and various organisms it is unclear what the identity of the sugar substrate is, and in fact, the phylogenetic tree of this family sports a considerably deep branching suggestive of possible major differences in substrate structure. Nevertheless, the family is characterized by a conserved tetracysteine motif (CxxC.....[GN]xCxxC) possibly indicative of a metal binding site, as well as an
Probab=30.57 E-value=5.3e+02 Score=25.28 Aligned_cols=22 Identities=5% Similarity=-0.050 Sum_probs=17.9
Q ss_pred CHHHHHHHHHHHHHhCCEEEEe
Q 013008 265 TKEFLQFLRDACDDAGALLVFD 286 (451)
Q Consensus 265 ~~~~l~~l~~l~~~~g~llI~D 286 (451)
.......+.++|+++|+.+|+.
T Consensus 145 ~~~~~~~l~~~A~~~gi~~Il~ 166 (343)
T TIGR03573 145 DHAIFASVYQVALKFNIPLIIW 166 (343)
T ss_pred hhHHHHHHHHHHHHhCCCEEEe
Confidence 4455778899999999998876
No 433
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=30.57 E-value=89 Score=24.19 Aligned_cols=42 Identities=12% Similarity=0.226 Sum_probs=29.6
Q ss_pred HHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEe
Q 013008 236 EATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFD 286 (451)
Q Consensus 236 ~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~D 286 (451)
..++..+..-+.-.++++-+.+ .....+.+.|+++|++++.=
T Consensus 40 ~~l~~~i~~aD~VIv~t~~vsH---------~~~~~vk~~akk~~ip~~~~ 81 (97)
T PF10087_consen 40 SRLPSKIKKADLVIVFTDYVSH---------NAMWKVKKAAKKYGIPIIYS 81 (97)
T ss_pred hHHHHhcCCCCEEEEEeCCcCh---------HHHHHHHHHHHHcCCcEEEE
Confidence 3577777654565666655543 33788999999999999853
No 434
>PRK06683 hypothetical protein; Provisional
Probab=30.32 E-value=88 Score=23.61 Aligned_cols=50 Identities=16% Similarity=0.102 Sum_probs=34.6
Q ss_pred HHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCC
Q 013008 236 EATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLG 293 (451)
Q Consensus 236 ~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~g 293 (451)
+...+.++.++...|++-.. .++...+.+..+|++++++++.-+....+|
T Consensus 17 ~~v~kaik~gkaklViiA~D--------a~~~~~~~i~~~~~~~~Vpv~~~~t~~eLG 66 (82)
T PRK06683 17 KRTLEAIKNGIVKEVVIAED--------ADMRLTHVIIRTALQHNIPITKVESVRKLG 66 (82)
T ss_pred HHHHHHHHcCCeeEEEEECC--------CCHHHHHHHHHHHHhcCCCEEEECCHHHHH
Confidence 44555666567777777443 244568999999999999998776554443
No 435
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=30.28 E-value=61 Score=34.53 Aligned_cols=33 Identities=30% Similarity=0.294 Sum_probs=29.0
Q ss_pred CHHHHHHHHHHHHHhCCEEEEeccccCCCcccc
Q 013008 265 TKEFLQFLRDACDDAGALLVFDEVQCGLGRTGY 297 (451)
Q Consensus 265 ~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~ 297 (451)
+++.++++++-|+++||-||.|=|+.-|+..|.
T Consensus 212 tPedfk~fVD~aH~~GIgViLD~V~~HF~~d~~ 244 (628)
T COG0296 212 TPEDFKALVDAAHQAGIGVILDWVPNHFPPDGN 244 (628)
T ss_pred CHHHHHHHHHHHHHcCCEEEEEecCCcCCCCcc
Confidence 678899999999999999999999987876553
No 436
>PF13872 AAA_34: P-loop containing NTP hydrolase pore-1
Probab=30.24 E-value=34 Score=32.82 Aligned_cols=25 Identities=36% Similarity=0.587 Sum_probs=20.9
Q ss_pred HHHHHHHHHHH-HHhCCEEEEecccc
Q 013008 266 KEFLQFLRDAC-DDAGALLVFDEVQC 290 (451)
Q Consensus 266 ~~~l~~l~~l~-~~~g~llI~DEv~t 290 (451)
...|++|.++| +.++.++|+||.|.
T Consensus 158 ~sRl~ql~~W~g~dfdgvivfDEcH~ 183 (303)
T PF13872_consen 158 RSRLDQLVDWCGEDFDGVIVFDECHK 183 (303)
T ss_pred cchHHHHHHHHhcCCCceEEeccchh
Confidence 34599999999 45789999999985
No 437
>COG3870 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=30.08 E-value=2.5e+02 Score=22.09 Aligned_cols=55 Identities=22% Similarity=0.248 Sum_probs=37.3
Q ss_pred EEEEecCChHHHHHHHHHCCceee----ecCC---CCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 013008 388 IGIEFDVSATPVVDACRDSGLLVL----TAGK---GNVVRLVPPLIISEQELDQAVEILCKTLPV 445 (451)
Q Consensus 388 ~~~~~~~~~~~~~~~l~~~Gv~~~----~~~~---~~~iri~~~~~~t~e~i~~~l~~l~~~l~~ 445 (451)
+.+.-+.++.++.+.|.++|.-+. .+|. |+.-- -....+++++.++..|++..+.
T Consensus 5 iaivqd~da~~l~~~L~d~~fraTkLAsTGGFlkaGNTTf---liGved~~vd~~~s~Ike~C~~ 66 (109)
T COG3870 5 IAIVQDQDANELEDALTDKNFRATKLASTGGFLKAGNTTF---LIGVEDDRVDALRSLIKENCKS 66 (109)
T ss_pred EEEEecccHHHHHHHHHhCCceeEEeeccCceeecCCeEE---EEecccchhHHHHHHHHHHhhh
Confidence 333335678899999999987654 2332 33321 2356788999999999998764
No 438
>PF00408 PGM_PMM_IV: Phosphoglucomutase/phosphomannomutase, C-terminal domain; InterPro: IPR005843 The alpha-D-phosphohexomutase superfamily is composed of four related enzymes, each of which catalyses a phosphoryl transfer on their sugar substrates: phosphoglucomutase (PGM), phosphoglucomutase/phosphomannomutase (PGM/PMM), phosphoglucosamine mutase (PNGM), and phosphoacetylglucosamine mutase (PAGM) []. PGM (5.4.2.2 from EC) converts D-glucose 1-phosphate into D-glucose 6-phosphate, and participates in both the breakdown and synthesis of glucose []. PGM/PMM (5.4.2.2 from EC; 5.4.2.8 from EC) are primarily bacterial enzymes that use either glucose or mannose as substrate, participating in the biosynthesis of a variety of carbohydrates such as lipopolysaccharides and alginate [, ]. Both PNGM (5.4.2.3 from EC) and PAGM (5.4.2.10 from EC) are involved in the biosynthesis of UDP-N-acetylglucosamine [, ]. Despite differences in substrate specificity, these enzymes share a similar catalytic mechanism, converting 1-phospho-sugars to 6-phospho-sugars via a biphosphorylated 1,6-phospho-sugar. The active enzyme is phosphorylated at a conserved serine residue and binds one magnesium ion; residues around the active site serine are well conserved among family members. The reaction mechanism involves phosphoryl transfer from the phosphoserine to the substrate to create a biophosphorylated sugar, followed by a phosphoryl transfer from the substrate back to the enzyme []. The structures of PGM and PGM/PMM have been determined, and were found to be very similar in topology. These enzymes are both composed of four domains and a large central active site cleft, where each domain contains residues essential for catalysis and/or substrate recognition. Domain I contains the catalytic phosphoserine, domain II contains a metal-binding loop to coordinate the magnesium ion, domain III contains the sugar-binding loop that recognises the two different binding orientations of the 1- and 6-phospho-sugars, and domain IV contains a phosphate-binding site required for orienting the incoming phospho-sugar substrate. This entry represents the C-terminal domain alpha-D-phosphohexomutase enzymes.; GO: 0016868 intramolecular transferase activity, phosphotransferases, 0005975 carbohydrate metabolic process; PDB: 1KFQ_B 1KFI_A 3PDK_B 2F7L_A 1TUO_A 2FKM_X 3C04_A 1K2Y_X 1P5G_X 2H4L_X ....
Probab=29.76 E-value=1.1e+02 Score=22.23 Aligned_cols=34 Identities=21% Similarity=0.329 Sum_probs=27.5
Q ss_pred eeecCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q 013008 410 VLTAGKGNVVRLVPPLIISEQELDQAVEILCKTLP 444 (451)
Q Consensus 410 ~~~~~~~~~iri~~~~~~t~e~i~~~l~~l~~~l~ 444 (451)
++|+|....+|+..-.. +.+.+++..+.+.+.++
T Consensus 40 vR~SgTEP~iRv~~Ea~-~~~~~~~~~~~i~~~ik 73 (73)
T PF00408_consen 40 VRPSGTEPKIRVYVEAP-DEEELEEIAEEIAEAIK 73 (73)
T ss_dssp EEEESSSSEEEEEEEES-SHHHHHHHHHHHHHHHH
T ss_pred EECCCCCceEEEEEEeC-CHHHHHHHHHHHHHhhC
Confidence 67888778899987666 89999998888887664
No 439
>TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase. Members of this family are the trehalose biosynthetic enzyme malto-oligosyltrehalose trehalohydrolase, formally known as 4-alpha-D-{(1-4)-alpha-D-glucano}trehalose trehalohydrolase (EC 3.2.1.141). It is the TreZ protein of the TreYZ pathway for trehalose biosynthesis, and alternative to the OtsAB system.
Probab=29.59 E-value=1.4e+02 Score=31.47 Aligned_cols=51 Identities=22% Similarity=0.183 Sum_probs=35.9
Q ss_pred CCeEEEEEccccCCCCc---------------cccCHHHHHHHHHHHHHhCCEEEEeccccCCCcc
Q 013008 245 GKTAAVFVEPIQGEGGI---------------YSATKEFLQFLRDACDDAGALLVFDEVQCGLGRT 295 (451)
Q Consensus 245 ~~~aavi~ep~~~~~G~---------------~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~ 295 (451)
-.+.+|.+.|++...+. ..-+.+.++++++.|+++|+-+|.|=|+..++..
T Consensus 123 LGv~~i~L~Pi~~~~~~~~~GY~~~~~~~~~~~~G~~~e~k~lV~~aH~~Gi~VilD~V~NH~~~~ 188 (542)
T TIGR02402 123 LGITAIELMPVAQFPGTRGWGYDGVLPYAPHNAYGGPDDLKALVDAAHGLGLGVILDVVYNHFGPE 188 (542)
T ss_pred cCCCEEEeCccccCCCCCCCCCCccCccccccccCCHHHHHHHHHHHHHCCCEEEEEEccCCCCCc
Confidence 35778888887432211 0123567999999999999999999997655443
No 440
>PF02593 dTMP_synthase: Thymidylate synthase; InterPro: IPR003745 This entry describes proteins of unknown function.
Probab=29.05 E-value=90 Score=28.45 Aligned_cols=58 Identities=16% Similarity=0.253 Sum_probs=40.8
Q ss_pred CCCHH-HHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCccc
Q 013008 232 YGNIE-ATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTG 296 (451)
Q Consensus 232 ~~d~~-~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G 296 (451)
|+|+- .|-+.+......+||+-.-.+. ++..+++.+.|+++|+-+++++.++.+--.|
T Consensus 61 HPDl~~~l~~~~~e~g~kavIvp~~~~~-------~g~~~~lk~~~e~~gi~~~~P~~~CsL~~~~ 119 (217)
T PF02593_consen 61 HPDLTYELPEIAKEAGVKAVIVPSESPK-------PGLRRQLKKQLEEFGIEVEFPKPFCSLEENG 119 (217)
T ss_pred CchhHHHHHHHHHHcCCCEEEEecCCCc-------cchHHHHHHHHHhcCceeecCccccccCCCC
Confidence 44543 4555555456778877554443 3448899999999999999999998774333
No 441
>cd01821 Rhamnogalacturan_acetylesterase_like Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases. Rhamnogalacturan acetylesterase removes acetyl esters from rhamnogalacturonan substrates, and renders them susceptible to degradation by rhamnogalacturonases. Rhamnogalacturonans are highly branched regions in pectic polysaccharides, consisting of repeating -(1,2)-L-Rha-(1,4)-D-GalUA disaccharide units, with many rhamnose residues substituted by neutral oligosaccharides such as arabinans, galactans and arabinogalactans. Extracellular enzymes participating in the degradation of plant cell wall polymers, such as Rhamnogalacturonan acetylesterase, would typically be found in saprophytic and plant pathogenic fungi and bacteria.
Probab=28.77 E-value=98 Score=27.24 Aligned_cols=43 Identities=14% Similarity=0.387 Sum_probs=27.1
Q ss_pred cCCCCeEEEEEccccCCC----C-ccccCHHHHHHHHHHHHHhCCEEE
Q 013008 242 IQPGKTAAVFVEPIQGEG----G-IYSATKEFLQFLRDACDDAGALLV 284 (451)
Q Consensus 242 l~~~~~aavi~ep~~~~~----G-~~~~~~~~l~~l~~l~~~~g~llI 284 (451)
++......|++.|..... + ....-..+-+.++++|+++|+.++
T Consensus 103 ~~~~~~~~il~tp~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~v 150 (198)
T cd01821 103 ARAKGATPILVTPVTRRTFDEGGKVEDTLGDYPAAMRELAAEEGVPLI 150 (198)
T ss_pred HHHCCCeEEEECCccccccCCCCcccccchhHHHHHHHHHHHhCCCEE
Confidence 333456677777653211 1 112345678899999999999885
No 442
>PRK05234 mgsA methylglyoxal synthase; Validated
Probab=28.30 E-value=1.1e+02 Score=25.81 Aligned_cols=46 Identities=13% Similarity=0.027 Sum_probs=31.7
Q ss_pred HHHHhcCCCCeEEEEEcc--ccCCCCccccCHHHHHHHHHHHHHhCCEEEEec
Q 013008 237 ATRKLIQPGKTAAVFVEP--IQGEGGIYSATKEFLQFLRDACDDAGALLVFDE 287 (451)
Q Consensus 237 ~le~~l~~~~~aavi~ep--~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DE 287 (451)
.+.+.|..+++.+||.-| . +..+. ...-..|++.|-+|+++++..-
T Consensus 66 ~i~~~I~~g~i~lVInt~dp~-~~~~~----~~D~~~IRR~Av~~~IP~~T~l 113 (142)
T PRK05234 66 QIGALIAEGKIDMLIFFRDPL-TAQPH----DPDVKALLRLADVWNIPVATNR 113 (142)
T ss_pred hHHHHHHcCceeEEEEecCCC-CCCcc----cchHHHHHHHHHHcCCCEEcCH
Confidence 355566677899998866 4 33221 1225689999999999998653
No 443
>PRK08883 ribulose-phosphate 3-epimerase; Provisional
Probab=28.18 E-value=4.6e+02 Score=23.86 Aligned_cols=53 Identities=19% Similarity=0.228 Sum_probs=27.3
Q ss_pred CHHHHHHhcCC-CCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhC--CEEEEe
Q 013008 234 NIEATRKLIQP-GKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAG--ALLVFD 286 (451)
Q Consensus 234 d~~~le~~l~~-~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g--~llI~D 286 (451)
.++.++..+.. +.+-..-++|-++.-..++...+-+++++++.+++| +++.+|
T Consensus 118 p~~~i~~~l~~~D~vlvMtV~PGfgGq~fi~~~lekI~~l~~~~~~~~~~~~I~vd 173 (220)
T PRK08883 118 PLHHLEYIMDKVDLILLMSVNPGFGGQSFIPHTLDKLRAVRKMIDESGRDIRLEID 173 (220)
T ss_pred CHHHHHHHHHhCCeEEEEEecCCCCCceecHhHHHHHHHHHHHHHhcCCCeeEEEE
Confidence 46777777752 233333344433211133444455666666655554 666677
No 444
>TIGR02403 trehalose_treC alpha,alpha-phosphotrehalase. Trehalose is a glucose disaccharide that serves in many biological systems as a compatible solute for protection against hyperosmotic and thermal stress. This family describes trehalose-6-phosphate hydrolase, product of the treC (or treA) gene, which is often found together with a trehalose uptake transporter and a trehalose operon repressor.
Probab=28.11 E-value=1.2e+02 Score=31.95 Aligned_cols=57 Identities=11% Similarity=0.099 Sum_probs=38.8
Q ss_pred CHHHHHHhcC---CCCeEEEEEccccCCCCc---c-----------ccCHHHHHHHHHHHHHhCCEEEEecccc
Q 013008 234 NIEATRKLIQ---PGKTAAVFVEPIQGEGGI---Y-----------SATKEFLQFLRDACDDAGALLVFDEVQC 290 (451)
Q Consensus 234 d~~~le~~l~---~~~~aavi~ep~~~~~G~---~-----------~~~~~~l~~l~~l~~~~g~llI~DEv~t 290 (451)
|+..+.+.+. .-.+.+|.+.|++..+.. . .-+.+.++++++-|+++|+-+|.|=|..
T Consensus 25 ~~~gi~~~l~yl~~lG~~~i~l~Pi~~~~~~~~gY~~~d~~~id~~~Gt~~~~~~lv~~ah~~gi~vilD~v~N 98 (543)
T TIGR02403 25 DLRGIIEKLDYLKKLGVDYIWLNPFYVSPQKDNGYDVSDYYAINPLFGTMADFEELVSEAKKRNIKIMLDMVFN 98 (543)
T ss_pred CHHHHHHhHHHHHHcCCCEEEECCcccCCCCCCCCCccccCccCcccCCHHHHHHHHHHHHHCCCEEEEEECcc
Confidence 4444444433 335778888888654321 1 1144679999999999999999998854
No 445
>COG3155 ElbB Uncharacterized protein involved in an early stage of isoprenoid biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=27.95 E-value=21 Score=30.59 Aligned_cols=66 Identities=24% Similarity=0.349 Sum_probs=41.2
Q ss_pred HHhCCEEEEeccccCCCccccc--cccc--ccCCCcceeeeccccc-CCcccccccccHHHHhhccCCCccCCCC
Q 013008 277 DDAGALLVFDEVQCGLGRTGYL--WAHE--HYGIFPDIMTLAKPLA-GGLPIGAALVTEKVASAINYGDHGSTFA 346 (451)
Q Consensus 277 ~~~g~llI~DEv~tg~gr~G~~--~~~~--~~~~~pdi~t~sK~lg-~G~~iG~v~~~~~i~~~~~~~~~~~t~~ 346 (451)
++++++++- .|||..-.. |+.. .-.+.||+..+.|++. .|-|+|+++..+.+...+-......|.+
T Consensus 84 e~~DALivP----GGFGAAKNLsdFA~kGaeC~v~pDv~al~~a~~~agKP~G~iCIaP~m~pki~g~~~~~TIG 154 (217)
T COG3155 84 EELDALIVP----GGFGAAKNLSDFASKGAECSVDPDLKALAQAMHQAGKPLGFMCIAPAMLPKIFGFPLRLTIG 154 (217)
T ss_pred Hhcceeecc----CccchhhhhHHHhccCccceeCHHHHHHHHHHHHhCCCceEEEecHHHHHHHcCCceeEEec
Confidence 456776653 356533221 2221 2246899999999998 6899999998888776664323334443
No 446
>TIGR03849 arch_ComA phosphosulfolactate synthase. This model finds the ComA (Coenzyme M biosynthesis A) protein, phosphosulfolactate synthase, in methanogenic archaea. The ComABC pathway is one of at least two pathways to the intermediate sulfopyruvate. Coenzyme M occurs rarely and sporadically outside of the archaea, as for expoxide metabolism in Xanthobacter autotrophicus Py2, but candidate phosphosulfolactate synthases from that and other species occur fall below the cutoff and outside the scope of this model. This model deliberately is narrower in scope than pfam02679.
Probab=27.87 E-value=58 Score=30.11 Aligned_cols=50 Identities=8% Similarity=0.075 Sum_probs=34.3
Q ss_pred CHHHHHHhcCCCCeEEEEEccc-cCCCCccccCHHHHHHHHHHHHHhCCEEEEe
Q 013008 234 NIEATRKLIQPGKTAAVFVEPI-QGEGGIYSATKEFLQFLRDACDDAGALLVFD 286 (451)
Q Consensus 234 d~~~le~~l~~~~~aavi~ep~-~~~~G~~~~~~~~l~~l~~l~~~~g~llI~D 286 (451)
.+..++.+++ +++=+++-+ .+-|...+.+++.+++..++|++||+.+...
T Consensus 10 ~~~~~~d~Le---~~g~yID~lKfg~Gt~~l~~~~~l~eki~la~~~~V~v~~G 60 (237)
T TIGR03849 10 PPKFVEDYLK---VCGDYITFVKFGWGTSALIDRDIVKEKIEMYKDYGIKVYPG 60 (237)
T ss_pred CHHHHHHHHH---HhhhheeeEEecCceEeeccHHHHHHHHHHHHHcCCeEeCC
Confidence 3566777774 233334443 3445556778899999999999999987643
No 447
>PF03853 YjeF_N: YjeF-related protein N-terminus; InterPro: IPR004443 The YjeF N-terminal domains occur either as single proteins or fusions with other domains and are commonly associated with enzymes. In bacteria and archaea, YjeF N-terminal domains are often fused to a YjeF C-terminal domain with high structural homology to the members of a ribokinase-like superfamily (see PDOC00806 from PROSITEDOC)and/or belong to operons that encode enzymes of diverse functions: pyridoxal phosphate biosynthetic protein PdxJ; phosphopanteine-protein transferase; ATP/GTP hydrolase; and pyruvate-formate lyase 1-activating enzyme. In plants, the YjeF N-terminal domain is fused to a C-terminal putative pyridoxamine 5'-phosphate oxidase. In eukaryotes, proteins that consist of (Sm)-FDF-YjeF N-terminal domains may be involved in RNA processing [, ]. The YjeF N-terminal domains represent a novel version of the Rossmann fold, one of the most common protein folds in nature observed in numerous enzyme families, that has acquired a set of catalytic residues and structural features that distinguish them from the conventional dehydrogenases. The YjeF N-terminal domain is comprised of a three-layer alpha-beta-alpha sandwich with a central beta-sheet surrounded by helices. The conservation of the acidic residues in the predicted active site of the YjeF N-terminal domains is reminiscent of the presence of such residues in the active sites of diverse hydrolases [, ].; PDB: 3K5W_A 2O8N_A 2DG2_F 3RNO_A 1JZT_B 3D3K_A 3D3J_A 3RSG_A 3RT9_A 3RRF_A ....
Probab=27.65 E-value=1.5e+02 Score=25.66 Aligned_cols=64 Identities=19% Similarity=0.250 Sum_probs=41.9
Q ss_pred eEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCC-cccccccccccCCCccee-eec
Q 013008 247 TAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLG-RTGYLWAHEHYGIFPDIM-TLA 314 (451)
Q Consensus 247 ~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~g-r~G~~~~~~~~~~~pdi~-t~s 314 (451)
..-+|+|.++|.+-. -+.++.+.++.+.+.++..++|+=|+=+|+. -+|.. ...-+.+|.+ ||+
T Consensus 99 ~~dlIIDal~G~G~~-~~l~~~~~~~i~~iN~~~~~viAiDiPSGl~~dtG~~---~~~~v~Ad~Tvt~g 164 (169)
T PF03853_consen 99 PADLIIDALFGTGFS-GPLRGPIAELIDWINASRAPVIAIDIPSGLDADTGEV---DGPAVRADYTVTFG 164 (169)
T ss_dssp CESEEEEES-STTGG-SCGSTCHHHHHHHHHHHCSEEEEESS-TTCBTTTB-B---SSSS---SEEEEES
T ss_pred cccEEEEecccCCCC-CCcCHHHHHHHHHHhccCCcEEEecCCCCccCCCCCc---CCCEEEcceeeecC
Confidence 467999999999743 3455568999999999999999999999973 33432 1223567754 554
No 448
>cd01394 radB RadB. The archaeal protein radB shares similarity radA, the archaeal functional homologue to the bacterial RecA. The precise function of radB is unclear.
Probab=27.37 E-value=4.5e+02 Score=23.43 Aligned_cols=45 Identities=18% Similarity=0.132 Sum_probs=26.4
Q ss_pred CeEEEEEccccCCCCccccC-----------HHHHHHHHHHHHHhCCEEEE-ecccc
Q 013008 246 KTAAVFVEPIQGEGGIYSAT-----------KEFLQFLRDACDDAGALLVF-DEVQC 290 (451)
Q Consensus 246 ~~aavi~ep~~~~~G~~~~~-----------~~~l~~l~~l~~~~g~llI~-DEv~t 290 (451)
....|++|++...--..... ...+..|..+|+++++.+|+ .++.+
T Consensus 103 ~~~lvvIDsi~~l~~~~~~~~~~~~~~~~~l~~~~~~L~~~a~~~~~~vi~t~q~~~ 159 (218)
T cd01394 103 KVDLVVVDSATALYRLELGDDDTTIKNYRELAKQLTFLLWLARKHDVAVVITNQVYS 159 (218)
T ss_pred CCcEEEEechHHhhhHHhcCccchHHHHHHHHHHHHHHHHHHHHhCCEEEEecCCEE
Confidence 47889999976431000001 12234567899999987775 44443
No 449
>KOG1465 consensus Translation initiation factor 2B, beta subunit (eIF-2Bbeta/GCD7) [Translation, ribosomal structure and biogenesis]
Probab=27.20 E-value=5.7e+02 Score=24.63 Aligned_cols=127 Identities=9% Similarity=0.112 Sum_probs=69.4
Q ss_pred HHHHHHHhhccCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEc--CCccCChhhhhhccCCCCcCCCC
Q 013008 143 IELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFT--NSFHGRTMGALALTSKEHYRSPF 220 (451)
Q Consensus 143 ~~l~~~l~~~~~~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~--~~yhg~~~~~~~~~~~~~~~~~~ 220 (451)
+..+..-.++..-..|++|.|.+..++..++.|.+-. .+-.|++.+ |.+.|+.... .+.
T Consensus 150 E~Ia~Qa~ehihsnEviLT~g~SrTV~~FL~~A~kk~---------Rkf~viVaE~~p~~qgH~~Ak-~la--------- 210 (353)
T KOG1465|consen 150 ENIAVQAIEHIHSNEVILTLGSSRTVENFLKHAAKKG---------RKFRVIVAEGAPNNQGHELAK-PLA--------- 210 (353)
T ss_pred HhHHHHHHHHhccCceEEecCccHHHHHHHHHHHhcc---------CceEEEEeecCCcccchHhhH-HHH---------
Confidence 3444444455567789999999999999999887421 123455544 2333432211 111
Q ss_pred cCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCCcccc
Q 013008 221 EPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGY 297 (451)
Q Consensus 221 ~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~ 297 (451)
........++ |. ++-.++.+-+...+-.-.+.++||.+.+.- -..++..+++|-+++|+ .+|+...-+
T Consensus 211 -~~giettVI~--da-aVfA~MsrVnKVIigt~avl~NGgl~~~~G--~~~vAlaAk~h~vPv~V---lAp~yKLsP 278 (353)
T KOG1465|consen 211 -QAGIETTVIP--DA-AVFAMMSRVNKVIIGTHAVLANGGLRAPSG--VHTVALAAKHHSVPVIV---LAPMYKLSP 278 (353)
T ss_pred -HcCCeeEEec--cH-HHHHHhhhcceEEEEeeeEecCCCeeccch--HHHHHHHHHhcCCcEEE---ecchhhcCC
Confidence 0011222333 43 333444332333344455889999776554 44566778899999885 345434433
No 450
>cd01822 Lysophospholipase_L1_like Lysophospholipase L1-like subgroup of SGNH-hydrolases. The best characterized member in this family is TesA, an E. coli periplasmic protein with thioesterase, esterase, arylesterase, protease and lysophospholipase activity.
Probab=26.99 E-value=85 Score=26.81 Aligned_cols=39 Identities=15% Similarity=0.125 Sum_probs=23.9
Q ss_pred CeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEE
Q 013008 246 KTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLV 284 (451)
Q Consensus 246 ~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI 284 (451)
....|++.+..+..-.......+-+.+.++|+++++.++
T Consensus 101 ~~~vil~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 139 (177)
T cd01822 101 GAPVLLVGMQAPPNYGPRYTRRFAAIYPELAEEYGVPLV 139 (177)
T ss_pred CCeEEEEecCCCCccchHHHHHHHHHHHHHHHHcCCcEe
Confidence 556666655322211112345667788899999998766
No 451
>cd01017 AdcA Metal binding protein AcdA. These proteins have been shown to function in the ABC uptake of Zn2+ and Mn2+ and in competence for genetic transformation and adhesion. The AcdA proteins belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and they bind their ligand in the cleft between these domains. In addition, many of these proteins have a low complexity region containing metal binding histidine-rich motif (repetitive HDH sequence).
Probab=26.72 E-value=1.8e+02 Score=27.50 Aligned_cols=120 Identities=11% Similarity=0.218 Sum_probs=0.0
Q ss_pred HHHHHHHhhccCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhcc--CCCCcCCCC
Q 013008 143 IELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALT--SKEHYRSPF 220 (451)
Q Consensus 143 ~~l~~~l~~~~~~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~--~~~~~~~~~ 220 (451)
..+++.|++..+...-.|......-..-.-.+-..+....... ++..++++.++| ++......+. +.......-
T Consensus 127 ~~Ia~~L~~~dP~~~~~y~~N~~~~~~~L~~l~~~~~~~~~~~---~~~~~v~~H~af-~Y~~~~~gl~~~~~~~~~~~~ 202 (282)
T cd01017 127 ENIKDALIKLDPDNKEYYEKNAAAYAKKLEALDQEYRAKLAKA---KGKTFVTQHAAF-GYLARRYGLKQIAIVGVSPEV 202 (282)
T ss_pred HHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---CCCeEEEecccH-HHHHHHCCCeEEecccCCCCC
Q ss_pred cCCCCCeeEeeCCCHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEE
Q 013008 221 EPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVF 285 (451)
Q Consensus 221 ~~~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~ 285 (451)
.|... ++..+.+.++.+++.+|++||..++ +.+..++++.|+.++.
T Consensus 203 eps~~--------~l~~l~~~ik~~~v~~if~e~~~~~-----------~~~~~la~~~g~~v~~ 248 (282)
T cd01017 203 EPSPK--------QLAELVEFVKKSDVKYIFFEENASS-----------KIAETLAKETGAKLLV 248 (282)
T ss_pred CCCHH--------HHHHHHHHHHHcCCCEEEEeCCCCh-----------HHHHHHHHHcCCcEEE
No 452
>PRK06427 bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase; Reviewed
Probab=26.47 E-value=1e+02 Score=28.79 Aligned_cols=45 Identities=20% Similarity=0.241 Sum_probs=29.5
Q ss_pred HHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCC-EEEEeccc
Q 013008 237 ATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGA-LLVFDEVQ 289 (451)
Q Consensus 237 ~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~-llI~DEv~ 289 (451)
.++.++++.++.+|.+ |. ..+.+.++.+.+++++++. .+++|=+.
T Consensus 64 q~~~~~~~~~~~ai~i-------G~-l~~~~~~~~i~~~~~~~~~~~vv~DPv~ 109 (266)
T PRK06427 64 QLDAVFSDIRIDAVKI-------GM-LASAEIIETVAEALKRYPIPPVVLDPVM 109 (266)
T ss_pred HHHHHHhcCCCCEEEE-------CC-cCCHHHHHHHHHHHHhCCCCCEEEcCcc
Confidence 3444444445566665 32 3467778888888888875 68888665
No 453
>PF00549 Ligase_CoA: CoA-ligase; InterPro: IPR005811 This entry represents a domain found in both the alpha and beta chains of succinyl-CoA synthase (6.2.1.4 from EC (GDP-forming) and 6.2.1.5 from EC (ADP-forming)) [, ]. This domain can also be found in ATP citrate synthase (2.3.3.8 from EC) and malate-CoA ligase (6.2.1.9 from EC). Some members of the domain utilise ATP others use GTP.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 3DMY_B 3MWE_B 3PFF_A 3MWD_B 2YV1_A 1EUC_A 2FP4_A 1EUD_A 2FPI_A 2FPG_A ....
Probab=26.39 E-value=61 Score=27.79 Aligned_cols=30 Identities=17% Similarity=0.153 Sum_probs=22.4
Q ss_pred HHHHHHhcCCCCeEEEEEccccCCCCcccc
Q 013008 235 IEATRKLIQPGKTAAVFVEPIQGEGGIYSA 264 (451)
Q Consensus 235 ~~~le~~l~~~~~aavi~ep~~~~~G~~~~ 264 (451)
.+.|+...++.++++|+++-+-|-+.+-.+
T Consensus 62 ~~~l~~~~~Dp~v~vIlvd~~~G~g~~~~~ 91 (153)
T PF00549_consen 62 NEALEIEAADPEVKVILVDIVGGIGSCEDP 91 (153)
T ss_dssp HHHHHHHHTSTTESEEEEEEESSSSSHHHH
T ss_pred HHHHHHHhcCCCccEEEEEeccccCchHHH
Confidence 467777777779999999998876644333
No 454
>PF13167 GTP-bdg_N: GTP-binding GTPase N-terminal
Probab=26.23 E-value=2.1e+02 Score=22.33 Aligned_cols=54 Identities=15% Similarity=0.207 Sum_probs=29.7
Q ss_pred CHHHHHHhcC--CCCeEEEEEcc-ccCCCCccccCHHHHHHHHHHHHHhCC-EEEEecc
Q 013008 234 NIEATRKLIQ--PGKTAAVFVEP-IQGEGGIYSATKEFLQFLRDACDDAGA-LLVFDEV 288 (451)
Q Consensus 234 d~~~le~~l~--~~~~aavi~ep-~~~~~G~~~~~~~~l~~l~~l~~~~g~-llI~DEv 288 (451)
+++.++.+.+ .-.+..-++-. ..+.+. .....+-+++|.++++++++ ++|+|+-
T Consensus 9 ~l~El~~L~~t~g~~vv~~~~q~~~~~~p~-~~iG~GK~eei~~~~~~~~~d~vvfd~~ 66 (95)
T PF13167_consen 9 SLEELEELAETAGYEVVGTVVQKRRKPDPK-TYIGSGKVEEIKELIEELDADLVVFDNE 66 (95)
T ss_pred HHHHHHHHHHHCCCeEEEEEEecCCCCCcc-eeechhHHHHHHHHHhhcCCCEEEECCC
Confidence 3555555554 22333323322 222333 34577889999999988876 4555543
No 455
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=26.20 E-value=6.1e+02 Score=24.59 Aligned_cols=64 Identities=22% Similarity=0.183 Sum_probs=38.4
Q ss_pred eCCCHHHHHHhcCCCCeEEEEE---ccccCCCCccccCHHHHH-------HHHHHHHHhCC--E---EEEeccccCCCcc
Q 013008 231 EYGNIEATRKLIQPGKTAAVFV---EPIQGEGGIYSATKEFLQ-------FLRDACDDAGA--L---LVFDEVQCGLGRT 295 (451)
Q Consensus 231 ~~~d~~~le~~l~~~~~aavi~---ep~~~~~G~~~~~~~~l~-------~l~~l~~~~g~--l---lI~DEv~tg~gr~ 295 (451)
+-.|.+.+.++++..++-+|+- |+. ..-.+..|..|++ -|.+.+++|.. - +=.||||..++..
T Consensus 59 DI~D~~~v~~~~~~~~~D~VvhfAAESH--VDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~ 136 (340)
T COG1088 59 DICDRELVDRLFKEYQPDAVVHFAAESH--VDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLD 136 (340)
T ss_pred cccCHHHHHHHHHhcCCCeEEEechhcc--ccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCC
Confidence 3358888999987544544442 332 2223444555554 37788888874 2 2369999777544
Q ss_pred c
Q 013008 296 G 296 (451)
Q Consensus 296 G 296 (451)
+
T Consensus 137 ~ 137 (340)
T COG1088 137 D 137 (340)
T ss_pred C
Confidence 3
No 456
>PRK00910 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=26.03 E-value=1.1e+02 Score=28.00 Aligned_cols=36 Identities=11% Similarity=-0.003 Sum_probs=28.3
Q ss_pred CCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEE
Q 013008 245 GKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVF 285 (451)
Q Consensus 245 ~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~ 285 (451)
-..+++|||=++.. |.... ++++.++|++||+.+|.
T Consensus 167 l~p~~vicEil~~d-G~ma~----~~~l~~fA~~h~l~~is 202 (218)
T PRK00910 167 LQPAGVLCELTNPD-GTMAK----TPEIIAFGKLHNMPVLT 202 (218)
T ss_pred CCceEEEEEEecCC-CCcCC----HHHHHHHHHHcCCcEEE
Confidence 34689999987654 55555 88899999999999874
No 457
>PF02603 Hpr_kinase_N: HPr Serine kinase N terminus; InterPro: IPR011126 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents the N-terminal region of Hpr Serine/threonine kinase PtsK. This kinase is the sensor in a multicomponent phosphorelay system in control of carbon catabolic repression in bacteria []. This kinase in unusual in that it recognises the tertiary structure of its target and is a member of a novel family unrelated to any previously described protein phosphorylating enzymes []. X-ray analysis of the full-length crystalline enzyme from Staphylococcus xylosus at a resolution of 1.95 A shows the enzyme to consist of two clearly separated domains that are assembled in a hexameric structure resembling a three-bladed propeller. The blades are formed by two N-terminal domains each, and the compact central hub assembles the C-terminal kinase domains []. ; GO: 0000155 two-component sensor activity, 0004672 protein kinase activity, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay), 0006109 regulation of carbohydrate metabolic process; PDB: 1KNX_B 1KO7_A.
Probab=25.73 E-value=99 Score=25.43 Aligned_cols=39 Identities=13% Similarity=0.054 Sum_probs=20.5
Q ss_pred HHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEe
Q 013008 237 ATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFD 286 (451)
Q Consensus 237 ~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~D 286 (451)
.+++++.. ++.+||+.-. ..+ -+.+.++|++++++|+.=
T Consensus 73 ~l~~l~~~-~~P~iIvt~~------~~~----p~~l~e~a~~~~ipll~t 111 (127)
T PF02603_consen 73 RLEKLFSY-NPPCIIVTRG------LEP----PPELIELAEKYNIPLLRT 111 (127)
T ss_dssp HHHHHCTT-T-S-EEEETT------T-------HHHHHHHHHCT--EEEE
T ss_pred HHHHHhCC-CCCEEEEECc------CCC----CHHHHHHHHHhCCcEEEc
Confidence 45666654 4445554332 133 467788999999988754
No 458
>COG4422 Bacteriophage protein gp37 [Function unknown]
Probab=25.69 E-value=1.1e+02 Score=26.88 Aligned_cols=26 Identities=23% Similarity=0.534 Sum_probs=21.9
Q ss_pred ccccCHHHHHHHHHHHHHhCCEEEEe
Q 013008 261 IYSATKEFLQFLRDACDDAGALLVFD 286 (451)
Q Consensus 261 ~~~~~~~~l~~l~~l~~~~g~llI~D 286 (451)
..+.++++..+|...|+.+|+.+.+-
T Consensus 197 aR~idp~WvdeI~~~C~~~~~aFFFK 222 (250)
T COG4422 197 ARPIDPQWVDEIEDMCRDAGTAFFFK 222 (250)
T ss_pred CCCCCHHHHHHHHHHHHhcCccchhH
Confidence 46778999999999999998877654
No 459
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Most members of this sub-family appear to co-occur with N-terminal acyltransferase domains. Might be involved in lipid metabolism.
Probab=25.56 E-value=1.3e+02 Score=25.15 Aligned_cols=46 Identities=13% Similarity=0.229 Sum_probs=28.0
Q ss_pred CHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHh-CCEEE
Q 013008 234 NIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDA-GALLV 284 (451)
Q Consensus 234 d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~-g~llI 284 (451)
+++.+-+.+.+ +...+++.|..+ ..+..++-+.+.++|++| ++.++
T Consensus 68 nl~~ii~~~~~-~~~ivlv~~~~~----~~~~~~~n~~~~~~a~~~~~v~~i 114 (150)
T cd01840 68 QLDELLDALGP-DRQVYLVNPHVP----RPWEPDVNAYLLDAAKKYKNVTII 114 (150)
T ss_pred HHHHHHHHcCC-CCEEEEEECCCC----cchHHHHHHHHHHHHHHCCCcEEe
Confidence 34444444433 466777777521 234567778899999999 55444
No 460
>PRK09505 malS alpha-amylase; Reviewed
Probab=25.37 E-value=1.6e+02 Score=31.93 Aligned_cols=58 Identities=19% Similarity=0.273 Sum_probs=40.8
Q ss_pred CCHHHHHHhcC---CCCeEEEEEccccCC------------------CCc----------cccCHHHHHHHHHHHHHhCC
Q 013008 233 GNIEATRKLIQ---PGKTAAVFVEPIQGE------------------GGI----------YSATKEFLQFLRDACDDAGA 281 (451)
Q Consensus 233 ~d~~~le~~l~---~~~~aavi~ep~~~~------------------~G~----------~~~~~~~l~~l~~l~~~~g~ 281 (451)
.|+..+.+.|. .-.+.+|.+.|++-+ -|- ..-+.+.+++|++-|+++|+
T Consensus 227 Gdl~Gi~~kLdyl~~LGv~aIwlsPi~~~~~~~~~~g~~g~~~~~~yhgY~~~D~~~id~~~Gt~~dfk~Lv~~aH~~Gi 306 (683)
T PRK09505 227 GDLRGLTEKLDYLQQLGVNALWISSPLEQIHGWVGGGTKGDFPHYAYHGYYTLDWTKLDANMGTEADLRTLVDEAHQRGI 306 (683)
T ss_pred CCHHHHHHhhHHHHHcCCCEEEeCccccccccccccccccCCCcCCCCCCCccccccCCCCCCCHHHHHHHHHHHHHCCC
Confidence 36666666654 345778888887422 011 11256789999999999999
Q ss_pred EEEEecccc
Q 013008 282 LLVFDEVQC 290 (451)
Q Consensus 282 llI~DEv~t 290 (451)
-||+|-|..
T Consensus 307 ~VilD~V~N 315 (683)
T PRK09505 307 RILFDVVMN 315 (683)
T ss_pred EEEEEECcC
Confidence 999999954
No 461
>cd04915 ACT_AK-Ectoine_2 ACT domains located C-terminal to the catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway. This CD includes the second of two ACT domains located C-terminal to the catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway found in Methylomicrobium alcaliphilum, Vibrio cholerae, and various other halotolerant or halophilic bacteria. Bacteria exposed to hyperosmotic stress accumulate organic solutes called 'compatible solutes' of which ectoine, a heterocyclic amino acid, is one. Apart from its osmotic function, ectoine also exhibits a protective effect on proteins, nucleic acids and membranes against a variety of stress factors. de novo synthesis of ectoine starts with the phosphorylation of L-aspartate and shares its first two enzymatic steps with the biosynthesis of amino acids of the aspartate family: aspartokinas
Probab=25.35 E-value=1.7e+02 Score=20.71 Aligned_cols=45 Identities=16% Similarity=0.302 Sum_probs=32.2
Q ss_pred hHHHHHHHHHCCceee--ecCCCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 013008 396 ATPVVDACRDSGLLVL--TAGKGNVVRLVPPLIISEQELDQAVEILCKTL 443 (451)
Q Consensus 396 ~~~~~~~l~~~Gv~~~--~~~~~~~iri~~~~~~t~e~i~~~l~~l~~~l 443 (451)
..++.+.|.+.|+-+. ..+. ..+++ ++.+.+++.++++.+|.+.+
T Consensus 18 ~~ki~~~L~~~~I~v~~i~~~~-s~~~i--s~~V~~~~~~~av~~Lh~~f 64 (66)
T cd04915 18 LARGLAALAEAGIEPIAAHQSM-RNVDV--QFVVDRDDYDNAIKALHAAL 64 (66)
T ss_pred HHHHHHHHHHCCCCEEEEEecC-CeeEE--EEEEEHHHHHHHHHHHHHHH
Confidence 5578888889998773 2222 22444 56778999999999998765
No 462
>PRK10933 trehalose-6-phosphate hydrolase; Provisional
Probab=25.15 E-value=1.6e+02 Score=31.02 Aligned_cols=58 Identities=14% Similarity=0.167 Sum_probs=39.5
Q ss_pred CHHHHHHhcC---CCCeEEEEEccccCCC----Ccc----------ccCHHHHHHHHHHHHHhCCEEEEeccccC
Q 013008 234 NIEATRKLIQ---PGKTAAVFVEPIQGEG----GIY----------SATKEFLQFLRDACDDAGALLVFDEVQCG 291 (451)
Q Consensus 234 d~~~le~~l~---~~~~aavi~ep~~~~~----G~~----------~~~~~~l~~l~~l~~~~g~llI~DEv~tg 291 (451)
|+..+.+.|. .-.+.+|.+.|++..+ |-- .-+.+.+++|++.|+++|+-||.|=|...
T Consensus 31 dl~gi~~~ldyl~~lGv~~i~l~P~~~~~~~~~gY~~~d~~~id~~~Gt~~d~~~lv~~~h~~gi~vilD~V~NH 105 (551)
T PRK10933 31 DLRGVTQRLDYLQKLGVDAIWLTPFYVSPQVDNGYDVANYTAIDPTYGTLDDFDELVAQAKSRGIRIILDMVFNH 105 (551)
T ss_pred CHHHHHHhhHHHHhCCCCEEEECCCCCCCCCCCCCCcccCCCcCcccCCHHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 5555544443 3357889999986432 210 11446799999999999999999999643
No 463
>COG0742 N6-adenine-specific methylase [DNA replication, recombination, and repair]
Probab=25.14 E-value=1.7e+02 Score=26.05 Aligned_cols=28 Identities=39% Similarity=0.550 Sum_probs=20.4
Q ss_pred ecCCCEEEeeccCcccccCCCCCHHHHHHHHHHHhh
Q 013008 94 DAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANV 129 (451)
Q Consensus 94 d~~G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~ 129 (451)
..+|.++||+++|.+ .|| .||+.+.+..
T Consensus 41 ~i~g~~~LDlFAGSG--aLG------lEAlSRGA~~ 68 (187)
T COG0742 41 EIEGARVLDLFAGSG--ALG------LEALSRGAAR 68 (187)
T ss_pred ccCCCEEEEecCCcc--HhH------HHHHhCCCce
Confidence 468999999999988 455 4666665443
No 464
>PF02677 DUF208: Uncharacterized BCR, COG1636; InterPro: IPR003828 This entry describes proteins of unknown function.
Probab=25.13 E-value=1.4e+02 Score=26.32 Aligned_cols=44 Identities=16% Similarity=0.221 Sum_probs=32.2
Q ss_pred HHHhcC-CCCeEEEEEccccCCCCccccCHHHH---HHHHHHHHHhCCEEEEec
Q 013008 238 TRKLIQ-PGKTAAVFVEPIQGEGGIYSATKEFL---QFLRDACDDAGALLVFDE 287 (451)
Q Consensus 238 le~~l~-~~~~aavi~ep~~~~~G~~~~~~~~l---~~l~~l~~~~g~llI~DE 287 (451)
++.+.+ ..++.+++.+|+ +.|..||. +++.++|++.|+.+|.++
T Consensus 15 ~~~L~~~g~~vt~~fyNPN------IhP~~Ey~~R~~~~~~~~~~~~i~~i~~~ 62 (176)
T PF02677_consen 15 LERLREEGFDVTGYFYNPN------IHPYEEYERRLEELKRFAEKLGIPLIEGD 62 (176)
T ss_pred HHHHHHCCCCeEEEEeCCC------CCcHHHHHHHHHHHHHHHHHcCCCEEecC
Confidence 444443 357888888886 45666665 457788999999999998
No 465
>PRK08286 cbiC cobalt-precorrin-8X methylmutase; Validated
Probab=25.09 E-value=5.3e+02 Score=23.49 Aligned_cols=50 Identities=16% Similarity=0.161 Sum_probs=31.5
Q ss_pred CCcceeeecccccCCccccccccc--HH-HHhhccC-CCccCCCCCcHHHHHHHHHHHHHh
Q 013008 306 IFPDIMTLAKPLAGGLPIGAALVT--EK-VASAINY-GDHGSTFAGSPLVCNAAIAVLDKI 362 (451)
Q Consensus 306 ~~pdi~t~sK~lg~G~~iG~v~~~--~~-i~~~~~~-~~~~~t~~~~~~~~aaa~aal~~~ 362 (451)
+.|.+++ |+|+|||-+. ++ +++.--+ ....++-+|++++.++..+.+..+
T Consensus 157 ~~PalVI-------G~PVGFV~AaEsKe~L~~~~iP~It~~GrkGGS~vAaAivNALl~~~ 210 (214)
T PRK08286 157 LQVDAVV-------GVPVGFVGAAESKEALTESDLPAIAALGRKGGSNVAAAIVNAILYHL 210 (214)
T ss_pred CCCcEEE-------EeCCccccHHHHHHHHHhCCCCEEEEecCCCcHHHHHHHHHHHHHHh
Confidence 5676665 7899998763 33 3321111 134567789999888877776544
No 466
>PF03652 UPF0081: Uncharacterised protein family (UPF0081); InterPro: IPR005227 Holliday junction resolvases (HJRs) are key enzymes of DNA recombination. The principal HJRs are now known or confidently predicted for all bacteria and archaea whose genomes have been completely sequenced, with many species encoding multiple potential HJRs. Structural and evolutionary relationships of HJRs and related nucleases suggests that the HJR function has evolved independently from at least four distinct structural folds, namely RNase H, endonuclease, endonuclease VII-colicin E and RusA (IPR008822 from INTERPRO): The endonuclease fold, whose structural prototypes are the phage exonuclease, the very short patch repair nuclease (Vsr) and type II restriction enzymes, is shown to encompass by far a greater diversity of nucleases than previously suspected. This fold unifies archaeal HJRs (IPR002732 from INTERPRO), repair nucleases such as RecB (IPR004586 from INTERPRO) and Vsr (IPR004603 from INTERPRO), restriction enzymes and a variety of predicted nucleases whose specific activities remain to be determined. The RNase H fold characterises the RuvC family (IPR002176 from INTERPRO), which is nearly ubiquitous in bacteria, and in addition the YqgF family (IPR005227 from INTERPRO). The proteins of this family, typified by Escherichia coli YqgF, are likely to function as an alternative to RuvC in most bacteria, but could be the principal HJRs in low-GC Gram-positive bacteria and Aquifex. Endonuclease VII of phage T4 (IPR004211 from INTERPRO) is shown to serve as a structural template for many nucleases, including McrA and other type II restriction enzymes. Together with colicin E7, endonuclease VII defines a distinct metal-dependent nuclease fold. Horizontal gene transfer, lineage-specific gene loss and gene family expansion, and non-orthologous gene displacement seem to have been major forces in the evolution of HJRs and related nucleases. A remarkable case of displacement is seen in the Lyme disease spirochete Borrelia burgdorferi, which does not possess any of the typical HJRs, but instead encodes, in its chromosome and each of the linear plasmids, members of the exonuclease family predicted to function as HJRs. The diversity of HJRs and related nucleases in bacteria and archaea contrasts with their near absence in eukaryotes. The few detected eukaryotic representatives of the endonuclease fold and the RNase H fold have probably been acquired from bacteria via horizontal gene transfer. The identity of the principal HJR(s) involved in recombination in eukaryotes remains uncertain; this function could be performed by topoisomerase IB or by a novel, so far undetected, class of enzymes. Likely HJRs and related nucleases were identified in the genomes of numerous bacterial and eukaryotic DNA viruses. Gene flow between viral and cellular genomes has probably played a major role in the evolution of this class of enzymes. This family represents the YqgF family of putative Holliday junction resolvases. With the exception of the spirochetes, the YqgF family is represented in all bacterial lineages, including the mycoplasmas with their highly degenerate genomes. The RuvC resolvases are conspicuously absent in the low-GC Gram-positive bacterial lineage, with the exception of Ureaplasma parvum (Ureaplasma urealyticum biotype 1) (Q9PQY7 from SWISSPROT, []). Furthermore, loss of function ruvC mutants of E. coli show a residual HJR activity that cannot be ascribed to the prophage-encoded RusA resolvase []. This suggests that the YqgF family proteins could be alternative HJRs whose function partially overlaps with that of RuvC [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006281 DNA repair, 0006310 DNA recombination, 0006974 response to DNA damage stimulus, 0005737 cytoplasm; PDB: 1NU0_A 1OVQ_A 1NMN_B 1VHX_B 1IV0_A.
Probab=24.85 E-value=2.4e+02 Score=23.53 Aligned_cols=56 Identities=20% Similarity=0.218 Sum_probs=33.1
Q ss_pred CHHHHHHhcCCCCeEEE-EEccccCCCCccccCHHHHHH-HHHHHHHh-CCEE-EEecccc
Q 013008 234 NIEATRKLIQPGKTAAV-FVEPIQGEGGIYSATKEFLQF-LRDACDDA-GALL-VFDEVQC 290 (451)
Q Consensus 234 d~~~le~~l~~~~~aav-i~ep~~~~~G~~~~~~~~l~~-l~~l~~~~-g~ll-I~DEv~t 290 (451)
+++.|.++++..++..| +=-|.+.. |..-+.....++ ..+|.+++ ++.+ .+||-+|
T Consensus 39 ~~~~l~~li~~~~i~~iVvGlP~~~~-G~~~~~~~~v~~f~~~L~~~~~~ipV~~~DEr~T 98 (135)
T PF03652_consen 39 DIEELKKLIEEYQIDGIVVGLPLNMD-GSESEQARRVRKFAEELKKRFPGIPVILVDERLT 98 (135)
T ss_dssp CHHHHHHHHHHCCECEEEEEEEBBCT-SSC-CCHHHHHHHHHHHHHHH-TSEEEEEECSCS
T ss_pred HHHHHHHHHHHhCCCEEEEeCCcccC-CCccHHHHHHHHHHHHHHHhcCCCcEEEECCChh
Confidence 78999999986555544 44565444 333333333444 44455555 7755 4799886
No 467
>PF08543 Phos_pyr_kin: Phosphomethylpyrimidine kinase; InterPro: IPR013749 This enzyme 2.7.4.7 from EC is part of the Thiamine pyrophosphate (TPP) synthesis pathway, TPP is an essential cofactor for many enzymes []. ; PDB: 2DDW_B 2DDO_B 2DDM_A 3IBQ_A 3H74_A 3HYO_A 1UB0_A 1VI9_D 1TD2_B 2PHP_D ....
Probab=24.66 E-value=57 Score=30.25 Aligned_cols=28 Identities=18% Similarity=0.204 Sum_probs=15.1
Q ss_pred ccCHHHHHHHHHHHHHhCCEEEEecccc
Q 013008 263 SATKEFLQFLRDACDDAGALLVFDEVQC 290 (451)
Q Consensus 263 ~~~~~~l~~l~~l~~~~g~llI~DEv~t 290 (451)
..+.+.++.|.++.+++++++|+|=|+.
T Consensus 69 l~~~~~v~~i~~~l~~~~~~vV~DPVm~ 96 (246)
T PF08543_consen 69 LGSAEQVEIIADFLKKPKIPVVLDPVMG 96 (246)
T ss_dssp -SSHHHHHHHHHHHHHTTTEEEEE---E
T ss_pred cCCchhhhhHHHHHhccCCCEEEecccc
Confidence 4556666666666666666666666653
No 468
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=24.38 E-value=1.9e+02 Score=22.84 Aligned_cols=43 Identities=28% Similarity=0.341 Sum_probs=31.9
Q ss_pred HHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEE
Q 013008 235 IEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVF 285 (451)
Q Consensus 235 ~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~ 285 (451)
.+.+.++++.+. -|++|-.. ..+.+.+++|.++|+++|..+.+
T Consensus 76 ~~~~~~~l~~g~--~v~~EKP~------~~~~~~~~~l~~~a~~~~~~~~V 118 (120)
T PF01408_consen 76 AEIAKKALEAGK--HVLVEKPL------ALTLEEAEELVEAAKEKGVKVMV 118 (120)
T ss_dssp HHHHHHHHHTTS--EEEEESSS------SSSHHHHHHHHHHHHHHTSCEEE
T ss_pred HHHHHHHHHcCC--EEEEEcCC------cCCHHHHHHHHHHHHHhCCEEEE
Confidence 355666665432 78888654 34778899999999999998765
No 469
>KOG3974 consensus Predicted sugar kinase [Carbohydrate transport and metabolism]
Probab=24.31 E-value=1.3e+02 Score=28.24 Aligned_cols=48 Identities=23% Similarity=0.288 Sum_probs=35.6
Q ss_pred CHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEe
Q 013008 234 NIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFD 286 (451)
Q Consensus 234 d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~D 286 (451)
+.+.+++.+. ++-++++-|-.|-. +.--..++.|.+.|++.++++++|
T Consensus 91 av~~i~k~L~--RlhavVIGPGLGRd---p~~~k~i~~iley~~~~dvP~VID 138 (306)
T KOG3974|consen 91 AVDIIEKLLQ--RLHAVVIGPGLGRD---PAILKEIAKILEYLRGKDVPLVID 138 (306)
T ss_pred hHhHHHHHHh--heeEEEECCCCCCC---HHHHHHHHHHHHHHhcCCCcEEEc
Confidence 4667777774 57788887766542 333455788899999999999999
No 470
>PRK00014 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=24.27 E-value=1.2e+02 Score=27.94 Aligned_cols=35 Identities=17% Similarity=0.224 Sum_probs=27.6
Q ss_pred CeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEE
Q 013008 246 KTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVF 285 (451)
Q Consensus 246 ~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~ 285 (451)
..+++|||=++-. |.... ++++.+++++||+.+|.
T Consensus 172 ~P~~vicEil~~d-G~ma~----~~~l~~fA~~~~l~iis 206 (230)
T PRK00014 172 RPAGVLCELMNAD-GTMMR----GASLERYAAKEGLVALA 206 (230)
T ss_pred CceEEEEEEeCCC-CCccC----HHHHHHHHHHcCCcEEE
Confidence 4689999986554 55555 88899999999999874
No 471
>PRK10886 DnaA initiator-associating protein DiaA; Provisional
Probab=24.13 E-value=5e+02 Score=23.15 Aligned_cols=41 Identities=15% Similarity=0.087 Sum_probs=25.4
Q ss_pred HHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEE
Q 013008 236 EATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVF 285 (451)
Q Consensus 236 ~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~ 285 (451)
..++....++++..+|..+ |.... +..+.+.++++|+.+|.
T Consensus 101 ~ql~~~~~~gDvli~iS~S-----G~s~~----v~~a~~~Ak~~G~~vI~ 141 (196)
T PRK10886 101 KQVRALGHAGDVLLAISTR-----GNSRD----IVKAVEAAVTRDMTIVA 141 (196)
T ss_pred HHHHHcCCCCCEEEEEeCC-----CCCHH----HHHHHHHHHHCCCEEEE
Confidence 4455555555555444322 22122 78889999999999983
No 472
>PF02570 CbiC: Precorrin-8X methylmutase; InterPro: IPR003722 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CbiC and CobH precorrin-8X methylmutase (also known as precorrin isomerase, 5.4.1.2 from EC), both as stand-alone enzymes and when CobJ forms part of a bifunctional enzyme. CobH and CbiC from the aerobic and anaerobic pathways, respectively, catalyse a methyl rearrangement in precorrin-8 that moves the methyl group from C-11 to C-12 to produce hydrogenobyrinic acid []. Hydrogenobyrinic acid now contains all the major framework alterations associated with corrin synthesis []. CobH and CbiC can sometimes be fused to other enzymes in the cobalamin pathway to make bifunctional enzymes: e.g., with CobJ/CibH (precorrin-3B C17-methylase/precorrin isomerase, IPR014422 from INTERPRO) and with CbiX (precorrin isomerase, IPR012067 from INTERPRO).; GO: 0016993 precorrin-8X methylmutase activity, 0009236 cobalamin biosynthetic process; PDB: 1V9C_B 1I1H_A 1F2V_A 1OU0_B 2AFV_A 2AFR_A 3E7D_D.
Probab=23.91 E-value=84 Score=28.19 Aligned_cols=49 Identities=20% Similarity=0.292 Sum_probs=25.4
Q ss_pred CCCcceeeecccccCCccccccccc--HH-HHhhccC-CCccCCCCCcHHHHHHHHHHHH
Q 013008 305 GIFPDIMTLAKPLAGGLPIGAALVT--EK-VASAINY-GDHGSTFAGSPLVCNAAIAVLD 360 (451)
Q Consensus 305 ~~~pdi~t~sK~lg~G~~iG~v~~~--~~-i~~~~~~-~~~~~t~~~~~~~~aaa~aal~ 360 (451)
++.|.+++ |.|+|||-+. ++ +++.--| ....++.+|++++.++..+.+.
T Consensus 143 ~~~PalVI-------g~PVGFV~A~ESKe~L~~~~vP~I~~~G~kGGS~vAaAivNALl~ 195 (198)
T PF02570_consen 143 GVRPALVI-------GVPVGFVGAAESKEALMQSGVPYITVRGRKGGSPVAAAIVNALLY 195 (198)
T ss_dssp T-TTSEEE-------E---SSSSHHHHHHHHHHSTS-EEEESSS---HHHHHHHHHHHHH
T ss_pred CCCCcEEE-------ECCCcccCcHHHHHHHHhCCCCEEEEecCCCCHHHHHHHHHHHHH
Confidence 45677776 7899998653 33 3332111 1345788899998887777665
No 473
>PRK01018 50S ribosomal protein L30e; Reviewed
Probab=23.84 E-value=2.1e+02 Score=22.34 Aligned_cols=43 Identities=21% Similarity=0.130 Sum_probs=30.0
Q ss_pred HHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEe
Q 013008 236 EATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFD 286 (451)
Q Consensus 236 ~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~D 286 (451)
....+.++.++...|++-.. .++...+.+..+|++++++++.-
T Consensus 22 ~~v~kai~~gkaklViiA~D--------~~~~~~~~i~~~c~~~~Ip~~~~ 64 (99)
T PRK01018 22 KRTIKAIKLGKAKLVIVASN--------CPKDIKEDIEYYAKLSGIPVYEY 64 (99)
T ss_pred HHHHHHHHcCCceEEEEeCC--------CCHHHHHHHHHHHHHcCCCEEEE
Confidence 34555666556777776532 25567899999999999998653
No 474
>PF07905 PucR: Purine catabolism regulatory protein-like family; InterPro: IPR012914 This domain is found in the purine catabolism regulatory protein expressed by Bacillus subtilis (PucR, O32138 from SWISSPROT). PucR is thought to be a transcriptional regulator of genes involved in the purine degradation pathway, and may contain a LysR-like DNA-binding domain. It is similar to LysR-type regulators in that it represses its own expression []. The other members of this family are also putative regulatory proteins.
Probab=23.73 E-value=1.6e+02 Score=24.01 Aligned_cols=45 Identities=16% Similarity=0.119 Sum_probs=29.2
Q ss_pred CHHHHHHhcC---CCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEE
Q 013008 234 NIEATRKLIQ---PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVF 285 (451)
Q Consensus 234 d~~~le~~l~---~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~ 285 (451)
|.+.+.+.++ ...++++++.....-. -+| +++.+.|++++.+||.
T Consensus 57 ~~~~~~~~i~~L~~~~~agL~i~~~~~~~--~iP-----~~~i~~A~~~~lPli~ 104 (123)
T PF07905_consen 57 DEEELREFIRELAEKGAAGLGIKTGRYLD--EIP-----EEIIELADELGLPLIE 104 (123)
T ss_pred CHHHHHHHHHHHHHCCCeEEEEeccCccc--cCC-----HHHHHHHHHcCCCEEE
Confidence 3444555554 4568888876542222 123 7788999999999884
No 475
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=23.17 E-value=70 Score=30.16 Aligned_cols=26 Identities=31% Similarity=0.316 Sum_probs=22.9
Q ss_pred CHHHHHHHHHHHHHhCCEEEEecccc
Q 013008 265 TKEFLQFLRDACDDAGALLVFDEVQC 290 (451)
Q Consensus 265 ~~~~l~~l~~l~~~~g~llI~DEv~t 290 (451)
+.+.+++|++.|+++|+-||.|=|..
T Consensus 50 t~~d~~~Lv~~~h~~gi~VilD~V~N 75 (316)
T PF00128_consen 50 TMEDFKELVDAAHKRGIKVILDVVPN 75 (316)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEEETS
T ss_pred hhhhhhhhhhccccccceEEEeeecc
Confidence 35679999999999999999999964
No 476
>COG0106 HisA Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase [Amino acid transport and metabolism]
Probab=23.06 E-value=6.1e+02 Score=23.53 Aligned_cols=49 Identities=10% Similarity=0.249 Sum_probs=31.4
Q ss_pred CHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEE
Q 013008 234 NIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVF 285 (451)
Q Consensus 234 d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~ 285 (451)
++.++.+.++......|++.-+.-.|...=+. ++.+.++|+..++.+|.
T Consensus 148 ~~~~l~~~~~~~g~~~ii~TdI~~DGtl~G~n---~~l~~~l~~~~~ipvia 196 (241)
T COG0106 148 ELEELAKRLEEVGLAHILYTDISRDGTLSGPN---VDLVKELAEAVDIPVIA 196 (241)
T ss_pred CHHHHHHHHHhcCCCeEEEEecccccccCCCC---HHHHHHHHHHhCcCEEE
Confidence 56666666665557777777664433221122 66778888888998884
No 477
>PF00586 AIRS: AIR synthase related protein, N-terminal domain; InterPro: IPR000728 This family includes Hydrogen expression/formation protein, HypE, which may be involved in the maturation of NifE hydrogenase; AIR synthase and FGAM synthase, which are involved in de novo purine biosynthesis; and selenide, water dikinase, an enzyme which synthesizes selenophosphate from selenide and ATP.; GO: 0003824 catalytic activity; PDB: 3VIU_A 2Z1T_A 2Z1U_A 3C9U_B 3C9S_A 3C9R_A 1VQV_A 3C9T_B 3M84_A 3QTY_A ....
Probab=22.97 E-value=1.6e+02 Score=22.58 Aligned_cols=21 Identities=29% Similarity=0.445 Sum_probs=16.3
Q ss_pred CHHHHHHHHHHHHHhCCEEEE
Q 013008 265 TKEFLQFLRDACDDAGALLVF 285 (451)
Q Consensus 265 ~~~~l~~l~~l~~~~g~llI~ 285 (451)
-.+.++.+.+.|+++|+.+|-
T Consensus 73 l~~~~~Gi~~~~~~~g~~ivG 93 (96)
T PF00586_consen 73 LKEIVKGIAEACREFGIPIVG 93 (96)
T ss_dssp HHHHHHHHHHHHHHHT-EEEE
T ss_pred HHHHHHHHHHHHHHhCCcEeC
Confidence 456777889999999999873
No 478
>PLN00125 Succinyl-CoA ligase [GDP-forming] subunit alpha
Probab=22.86 E-value=1.6e+02 Score=28.34 Aligned_cols=43 Identities=7% Similarity=0.017 Sum_probs=29.0
Q ss_pred HHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEE
Q 013008 235 IEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLV 284 (451)
Q Consensus 235 ~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI 284 (451)
++.+++..+.+-.++||+..-++..| ..+.+.++|+++|+.+|
T Consensus 83 ~~al~e~~~~Gvk~~vIisaGf~e~g-------~~~~~~~~ar~~girvi 125 (300)
T PLN00125 83 AAAILEAMEAELDLVVCITEGIPQHD-------MVRVKAALNRQSKTRLI 125 (300)
T ss_pred HHHHHHHHHcCCCEEEEECCCCCccc-------HHHHHHHHHhhcCCEEE
Confidence 56677777654445666655555443 36677788999999888
No 479
>TIGR00097 HMP-P_kinase phosphomethylpyrimidine kinase. This model represents phosphomethylpyrimidine kinase, the ThiD protein of thiamine biosynthesis. The protein is commonly observed within operons containing other thiamine biosynthesis genes. Numerous examples are fusion proteins with other thiamine-biosynthetic domains. Saccaromyces has three recent paralogs, two of which are isofunctional and score above the trusted cutoff. The third shows a longer branch length in a phylogenetic tree and scores below the trusted cutoff, as do putative second copies in a number of species.
Probab=22.83 E-value=1.6e+02 Score=27.27 Aligned_cols=46 Identities=17% Similarity=0.125 Sum_probs=33.3
Q ss_pred HHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCC-EEEEeccc
Q 013008 236 EATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGA-LLVFDEVQ 289 (451)
Q Consensus 236 ~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~-llI~DEv~ 289 (451)
++++.++++-++.+|-+ | ...+.+.++.+.+.+++++. .+++|=+.
T Consensus 57 ~q~~~~~~d~~~~aiki-------G-~l~~~~~~~~i~~~~~~~~~~~vVlDPv~ 103 (254)
T TIGR00097 57 AQLDAVFSDIPVDAAKT-------G-MLASAEIVEAVARKLREYPVRPLVVDPVM 103 (254)
T ss_pred HHHHHHHhCCCCCEEEE-------C-CcCCHHHHHHHHHHHHhcCCCcEEECCcc
Confidence 34444554445666665 4 34678889999999999999 69999775
No 480
>PRK04148 hypothetical protein; Provisional
Probab=22.77 E-value=4.5e+02 Score=21.92 Aligned_cols=24 Identities=8% Similarity=0.296 Sum_probs=20.8
Q ss_pred cccCHHHHHHHHHHHHHhCCEEEE
Q 013008 262 YSATKEFLQFLRDACDDAGALLVF 285 (451)
Q Consensus 262 ~~~~~~~l~~l~~l~~~~g~llI~ 285 (451)
+-|++|..+.|.+++++.|+-+++
T Consensus 84 irpp~el~~~~~~la~~~~~~~~i 107 (134)
T PRK04148 84 IRPPRDLQPFILELAKKINVPLII 107 (134)
T ss_pred eCCCHHHHHHHHHHHHHcCCCEEE
Confidence 457889999999999999998774
No 481
>PF04909 Amidohydro_2: Amidohydrolase; InterPro: IPR006992 These proteins are related to the metal-dependent hydrolase superfamily []. The family includes 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase which converts alpha-amino-beta-carboxymuconate-epsilon- semialdehyde (ACMS) to alpha-aminomuconate semialdehyde (AMS). ACMS can be converted non-enzymatically to quinolate, a potent endogenous excitoxin of neuronal cells which is implicated in the pathogenesis of various neurodegenerative disorders. In the presence of AMCSD, ACMS is converted to AMS, a benign catabolite. 2-amino-3-(3-oxoprop-2-enyl)-but-2-enedioate = 2-aminomuconate semialdehyde + CO2. ; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2QPX_A 4D8L_A 3K4W_I 3IRS_B 4DZI_B 3S4T_G 2GWG_B 3IJ6_A 2DVX_C 2DVT_C ....
Probab=22.69 E-value=1.4e+02 Score=27.42 Aligned_cols=51 Identities=14% Similarity=0.126 Sum_probs=34.5
Q ss_pred CHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEe
Q 013008 234 NIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFD 286 (451)
Q Consensus 234 d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~D 286 (451)
.++.+++.+.....++|-+.|..+.. ...++.....+.++|.++|+++++-
T Consensus 86 ~~~~l~~~~~~~g~~Gv~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~pv~~H 136 (273)
T PF04909_consen 86 AVEELERALQELGFRGVKLHPDLGGF--DPDDPRLDDPIFEAAEELGLPVLIH 136 (273)
T ss_dssp HHHHHHHHHHTTTESEEEEESSETTC--CTTSGHCHHHHHHHHHHHT-EEEEE
T ss_pred HHHHHHHhccccceeeeEecCCCCcc--ccccHHHHHHHHHHHHhhccceeee
Confidence 35777777755578888887754332 3344444459999999999988854
No 482
>PF07085 DRTGG: DRTGG domain; InterPro: IPR010766 This presumed domain is about 120 amino acids in length. It is found associated with CBS domains IPR000644 from INTERPRO, as well as the CbiA domain IPR002586 from INTERPRO. The function of this domain is unknown. It is named the DRTGG domain after some of the most conserved residues. This domain may be very distantly related to a pair of CBS domains. There are no significant sequence similarities, but its length and association with CBS domains supports this idea. ; PDB: 3L31_B 3L2B_A 2IOJ_A.
Probab=22.53 E-value=3.5e+02 Score=21.01 Aligned_cols=48 Identities=8% Similarity=0.096 Sum_probs=28.9
Q ss_pred eEeeCCCHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEe
Q 013008 228 NFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFD 286 (451)
Q Consensus 228 ~~~~~~d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~D 286 (451)
+.++-+..+.+..++.. .++++|+.. | ..+ =+.+.++|++.++.+|.=
T Consensus 44 vIt~gdR~di~~~a~~~-~i~~iIltg-----~-~~~----~~~v~~la~~~~i~vi~t 91 (105)
T PF07085_consen 44 VITPGDREDIQLAAIEA-GIACIILTG-----G-LEP----SEEVLELAKELGIPVIST 91 (105)
T ss_dssp EEEETT-HHHHHHHCCT-TECEEEEET-----T---------HHHHHHHHHHT-EEEE-
T ss_pred EEEeCCcHHHHHHHHHh-CCCEEEEeC-----C-CCC----CHHHHHHHHHCCCEEEEE
Confidence 34445567777777765 477777752 2 345 467888999999998853
No 483
>TIGR00530 AGP_acyltrn 1-acyl-sn-glycerol-3-phosphate acyltransferases. 1-acyl-sn-glycerol-3-phosphate acyltransferase is also called 1-AGP acyltransferase, lysophosphatidic acid acyltransferase, and LPA acyltransferase.
Probab=22.49 E-value=2.3e+02 Score=22.54 Aligned_cols=47 Identities=19% Similarity=0.271 Sum_probs=25.9
Q ss_pred HHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEE
Q 013008 235 IEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLV 284 (451)
Q Consensus 235 ~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI 284 (451)
++.+.+.++.+..-+++-|...+..|... .|......++.+.|+.+|
T Consensus 79 ~~~~~~~l~~g~~v~ifPeG~~~~~~~~~---~f~~g~~~la~~~~~pvv 125 (130)
T TIGR00530 79 LKAAIEVLKQGRSIGVFPEGTRSRGRDIL---PFKKGAFHIAIKAGVPIL 125 (130)
T ss_pred HHHHHHHHhCCCEEEEeCCCCCCCCCCCC---CcchhHHHHHHHcCCCEE
Confidence 34445555554444555555544444322 235667777777777665
No 484
>PRK06860 lipid A biosynthesis lauroyl acyltransferase; Provisional
Probab=22.28 E-value=4.5e+02 Score=25.16 Aligned_cols=20 Identities=15% Similarity=0.109 Sum_probs=14.4
Q ss_pred CceEEEEcCCccCChhhhhh
Q 013008 190 ATEFVSFTNSFHGRTMGALA 209 (451)
Q Consensus 190 ~~~ii~~~~~yhg~~~~~~~ 209 (451)
+..||+..+.+-++...+..
T Consensus 125 gkgvI~lt~H~GnwE~~~~~ 144 (309)
T PRK06860 125 GRGVLLVGVHFLTLELGARI 144 (309)
T ss_pred CCCEEEEecchhHHHHHHHH
Confidence 55688998888777665543
No 485
>cd04920 ACT_AKiii-DAPDC_2 ACT domains of a bifunctional AKIII (LysC)-like aspartokinase/meso-diaminopimelate decarboxylase (DAPDC). This CD includes the second of two ACT domains of a bifunctional AKIII (LysC)-like aspartokinase/meso-diaminopimelate decarboxylase (DAPDC) bacterial protein. Aspartokinase (AK) is the first enzyme in the aspartate metabolic pathway and catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. The lysA gene encodes the enzyme DAPDC, a pyridoxal-5'-phosphate (PLP)-dependent enzyme which catalyzes the final step in the lysine biosynthetic pathway converting meso-diaminopimelic acid (DAP) to l-lysine. Tandem ACT domains are positioned centrally with the AK catalytic domain N-terminal and the DAPDC domains C-terminal. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=22.25 E-value=1.5e+02 Score=20.71 Aligned_cols=45 Identities=16% Similarity=0.271 Sum_probs=31.8
Q ss_pred hHHHHHHHHHCCceeeecCCCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 013008 396 ATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTL 443 (451)
Q Consensus 396 ~~~~~~~l~~~Gv~~~~~~~~~~iri~~~~~~t~e~i~~~l~~l~~~l 443 (451)
..++++.|.+.++.+...+. ..+++ ++.+.+++.++++.+|-+.+
T Consensus 17 ~~~~~~~L~~~~i~~i~~~~-s~~~i--s~vv~~~d~~~av~~LH~~f 61 (63)
T cd04920 17 LGPALEVFGKKPVHLVSQAA-NDLNL--TFVVDEDQADGLCARLHFQL 61 (63)
T ss_pred HHHHHHHHhcCCceEEEEeC-CCCeE--EEEEeHHHHHHHHHHHHHHH
Confidence 45677778778887654433 22344 56778999999999998765
No 486
>PRK01792 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=22.22 E-value=1.4e+02 Score=27.20 Aligned_cols=35 Identities=20% Similarity=0.209 Sum_probs=27.5
Q ss_pred CeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEE
Q 013008 246 KTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVF 285 (451)
Q Consensus 246 ~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~ 285 (451)
..+++|||=++-. |.... ++++.+++++||+.+|.
T Consensus 167 ~p~~vicEil~~d-G~ma~----~~~~~~fA~~~~l~~is 201 (214)
T PRK01792 167 KEAGVICEITNDD-GTMAR----TPEIVEFAKKFGYAVVT 201 (214)
T ss_pred CceEEEEEEecCC-CCccC----HHHHHHHHHHcCCcEEE
Confidence 4689999987543 55555 88899999999999974
No 487
>cd01018 ZntC Metal binding protein ZntC. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and bind their specific ligands in the cleft between these domains. In addition, many of these proteins possess a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=22.19 E-value=2.5e+02 Score=26.34 Aligned_cols=120 Identities=13% Similarity=0.126 Sum_probs=0.0
Q ss_pred HHHHHHHhhccCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCcCCCCcC
Q 013008 143 IELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEP 222 (451)
Q Consensus 143 ~~l~~~l~~~~~~e~v~~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~ 222 (451)
..+++.|++..+...-.|..-...-..-.-.+-..+....... ++..++++.++| ++......+.-.......-.|
T Consensus 126 ~~I~~~L~~~dP~~~~~y~~N~~~~~~~L~~l~~~~~~~~~~~---~~~~~v~~H~af-~Y~~~~ygl~~~~~~~~~~ep 201 (266)
T cd01018 126 ENIYEALAELDPQNATYYQANLDALLAELDALDSEIRTILSKL---KQRAFMVYHPAW-GYFARDYGLTQIPIEEEGKEP 201 (266)
T ss_pred HHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---CCCeEEEECchh-HHHHHHcCCEEEecCCCCCCC
Q ss_pred CCCCeeEeeCCCHHHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEE
Q 013008 223 VMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVF 285 (451)
Q Consensus 223 ~~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~ 285 (451)
... ++..+.+.++.+++.+|++||..+. +.+..++++.|+.++.
T Consensus 202 s~~--------~l~~l~~~ik~~~v~~if~e~~~~~-----------~~~~~la~~~g~~v~~ 245 (266)
T cd01018 202 SPA--------DLKRLIDLAKEKGVRVVFVQPQFST-----------KSAEAIAREIGAKVVT 245 (266)
T ss_pred CHH--------HHHHHHHHHHHcCCCEEEEcCCCCc-----------HHHHHHHHHcCCeEEE
No 488
>COG0648 Nfo Endonuclease IV [DNA replication, recombination, and repair]
Probab=22.10 E-value=1.5e+02 Score=28.16 Aligned_cols=54 Identities=19% Similarity=0.229 Sum_probs=42.1
Q ss_pred HHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhC-CEEEEecccc
Q 013008 236 EATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAG-ALLVFDEVQC 290 (451)
Q Consensus 236 ~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g-~llI~DEv~t 290 (451)
+.|.+++.. +-..+++|..-+.+...--.-+.|++|.+++++.+ +-++.|=.|+
T Consensus 125 ~~Ln~~~~~-~~v~i~~e~~agegs~~g~~F~~L~eii~~~~~~~~igvCiDtcH~ 179 (280)
T COG0648 125 EALNELLEE-EGVIILLENTAGEGSGKGTQFGELAEIIDLIEEKERIGVCIDTCHA 179 (280)
T ss_pred HHHHHHhhc-cCCeEEEEEeccccCccccchhhHHHHHHhhcccCceEEEEEchhh
Confidence 556666653 23567778877777667778899999999999988 9999998886
No 489
>PRK08091 ribulose-phosphate 3-epimerase; Validated
Probab=22.03 E-value=2.5e+02 Score=25.87 Aligned_cols=54 Identities=9% Similarity=0.096 Sum_probs=29.1
Q ss_pred CCHHHHHHhcC-CCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhC--CEEEEe
Q 013008 233 GNIEATRKLIQ-PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAG--ALLVFD 286 (451)
Q Consensus 233 ~d~~~le~~l~-~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g--~llI~D 286 (451)
..++.++..+. -+.+-..-+||-++.-..+....+-+++++++.++++ +.+-+|
T Consensus 129 Tp~~~i~~~l~~vD~VLiMtV~PGfgGQ~f~~~~l~KI~~lr~~~~~~~~~~~IeVD 185 (228)
T PRK08091 129 TPISLLEPYLDQIDLIQILTLDPRTGTKAPSDLILDRVIQVENRLGNRRVEKLISID 185 (228)
T ss_pred CCHHHHHHHHhhcCEEEEEEECCCCCCccccHHHHHHHHHHHHHHHhcCCCceEEEE
Confidence 35778888886 2344555556644422222222344555556656655 667777
No 490
>COG1041 Predicted DNA modification methylase [DNA replication, recombination, and repair]
Probab=21.99 E-value=3.3e+02 Score=26.76 Aligned_cols=111 Identities=16% Similarity=0.167 Sum_probs=59.0
Q ss_pred HHHHHHHHhhccC---CCeEE--ecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccCChhhhhhccCCCCc
Q 013008 142 QIELAKRLVACSF---ADRVF--FSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHY 216 (451)
Q Consensus 142 ~~~l~~~l~~~~~---~e~v~--~~~sG~eA~~~al~~a~~~~~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~ 216 (451)
..+|++.+..+.. .+.++ |+.+|+-.+++.+.-++ +|-.| ....+..+ ..
T Consensus 182 ~P~lAR~mVNLa~v~~G~~vlDPFcGTGgiLiEagl~G~~----------------viG~D------id~~mv~g-ak-- 236 (347)
T COG1041 182 DPRLARAMVNLARVKRGELVLDPFCGTGGILIEAGLMGAR----------------VIGSD------IDERMVRG-AK-- 236 (347)
T ss_pred CHHHHHHHHHHhccccCCEeecCcCCccHHHHhhhhcCce----------------Eeecc------hHHHHHhh-hh--
Confidence 4567777666554 34555 88899988888877333 33221 11111111 11
Q ss_pred CCCCcCC-CCCeeEeeCCCHHHHHHhcCCCCeEEEEEccccCCCCccccC------HHHHHHHHHHHHHhC
Q 013008 217 RSPFEPV-MPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSAT------KEFLQFLRDACDDAG 280 (451)
Q Consensus 217 ~~~~~~~-~~~~~~~~~~d~~~le~~l~~~~~aavi~ep~~~~~G~~~~~------~~~l~~l~~l~~~~g 280 (451)
..+..+ ..+...+...|...+. +.+..+-+|++||.+|-....... .++++.+.+..+..|
T Consensus 237 -~Nl~~y~i~~~~~~~~~Da~~lp--l~~~~vdaIatDPPYGrst~~~~~~l~~Ly~~~le~~~evLk~gG 304 (347)
T COG1041 237 -INLEYYGIEDYPVLKVLDATNLP--LRDNSVDAIATDPPYGRSTKIKGEGLDELYEEALESASEVLKPGG 304 (347)
T ss_pred -hhhhhhCcCceeEEEecccccCC--CCCCccceEEecCCCCcccccccccHHHHHHHHHHHHHHHhhcCc
Confidence 011111 1233333333555554 544458999999999865433322 355666666666666
No 491
>PRK09361 radB DNA repair and recombination protein RadB; Provisional
Probab=21.92 E-value=4.8e+02 Score=23.41 Aligned_cols=46 Identities=9% Similarity=0.040 Sum_probs=26.8
Q ss_pred CCeEEEEEccccCCCCccc---cC--------HHHHHHHHHHHHHhCCEEE-Eecccc
Q 013008 245 GKTAAVFVEPIQGEGGIYS---AT--------KEFLQFLRDACDDAGALLV-FDEVQC 290 (451)
Q Consensus 245 ~~~aavi~ep~~~~~G~~~---~~--------~~~l~~l~~l~~~~g~llI-~DEv~t 290 (451)
.++..|++|++...-.... .+ ...+..|.++|+++|+.++ .-++..
T Consensus 106 ~~~~lvVIDsi~al~~~~~~~~~~~~~~~~~l~~~l~~L~~~a~~~~v~vi~tnq~~~ 163 (225)
T PRK09361 106 ENVGLIVLDSATSLYRLELEDEEDNSKLNRELGRQLTHLLKLARKHDLAVVITNQVYS 163 (225)
T ss_pred hcccEEEEeCcHHHhHHHhcCCccHHHHHHHHHHHHHHHHHHHHHhCCEEEEEcccee
Confidence 5788999999743210000 01 1223457888999998877 444443
No 492
>PLN02438 inositol-3-phosphate synthase
Probab=21.87 E-value=4.9e+02 Score=26.95 Aligned_cols=56 Identities=18% Similarity=0.232 Sum_probs=34.8
Q ss_pred CCHHHHHHhcCCC--CeE-------EEEEccc-cCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccC
Q 013008 233 GNIEATRKLIQPG--KTA-------AVFVEPI-QGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCG 291 (451)
Q Consensus 233 ~d~~~le~~l~~~--~~a-------avi~ep~-~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg 291 (451)
++++.|++.|+.+ .++ |.+.+.+ +-| | .|...+...+.++++++|++++=|+..+|
T Consensus 245 ~t~~~l~~ai~~~~~eispS~~YA~AAl~eG~~fVN-g--sP~~t~vP~~~elA~~~gvpi~GDD~KSG 310 (510)
T PLN02438 245 DTMENLLASIEKDEAEISPSTLYALACILEGVPFIN-G--SPQNTFVPGVIELAVKKNSLIGGDDFKSG 310 (510)
T ss_pred CCHHHHHHHHhcCCCcCChHHHHHHHHHHcCCCeEe-c--CCccccChhhHHHHHHcCCCEecccccCC
Confidence 4789999998732 221 1112221 111 1 13334567888999999999999998874
No 493
>COG1625 Fe-S oxidoreductase, related to NifB/MoaA family [Energy production and conversion]
Probab=21.81 E-value=1.5e+02 Score=29.65 Aligned_cols=47 Identities=17% Similarity=0.213 Sum_probs=32.4
Q ss_pred CCHHHHHHhcC------CCCeEEEEEccc----cCCCCccccCHHHHHHHHHHHHHh
Q 013008 233 GNIEATRKLIQ------PGKTAAVFVEPI----QGEGGIYSATKEFLQFLRDACDDA 279 (451)
Q Consensus 233 ~d~~~le~~l~------~~~~aavi~ep~----~~~~G~~~~~~~~l~~l~~l~~~~ 279 (451)
||.+.|++.++ .+.+.++.++|+ ++..+...++++.++++.+++++.
T Consensus 188 Ndge~L~kT~~dL~~~g~~~~~~~~~~pvGlt~~n~~~i~~~t~~~l~~~k~i~re~ 244 (414)
T COG1625 188 NDGEELEKTLEDLEEWGAHEVILMRVVPVGLTRYNRPGIRPPTPHELEEFKEIVREF 244 (414)
T ss_pred CcHHHHHHHHHHHHHhCcCceeEEEeecceeeecCCCCCCCCCHHHHHHHHHHHHHH
Confidence 67777777775 233444435675 344477888999999999888764
No 494
>PF03796 DnaB_C: DnaB-like helicase C terminal domain; InterPro: IPR007694 The hexameric helicase DnaB unwinds the DNA duplex at the Escherichia coli chromosome replication fork. Although the mechanism by which DnaB both couples ATP hydrolysis to translocation along DNA and denatures the duplex is unknown, a change in the quaternary structure of the protein involving dimerization of the N-terminal domain has been observed and may occur during the enzymatic cycle. This C-terminal domain contains an ATP-binding site and is therefore probably the site of ATP hydrolysis. ; GO: 0003678 DNA helicase activity, 0005524 ATP binding, 0006260 DNA replication; PDB: 1Q57_E 1E0K_D 1E0J_B 1CR2_A 1CR4_A 1CR1_A 1CR0_A 1MI8_A 2R6D_B 2R6C_C ....
Probab=21.69 E-value=1.4e+02 Score=27.71 Aligned_cols=52 Identities=13% Similarity=0.176 Sum_probs=33.8
Q ss_pred CHHHHHHhcC----C-CCeEEEEEccccCCCC--ccccCHH----HHHHHHHHHHHhCCEEEE
Q 013008 234 NIEATRKLIQ----P-GKTAAVFVEPIQGEGG--IYSATKE----FLQFLRDACDDAGALLVF 285 (451)
Q Consensus 234 d~~~le~~l~----~-~~~aavi~ep~~~~~G--~~~~~~~----~l~~l~~l~~~~g~llI~ 285 (451)
++++++..++ . .++.+|++|..+-... ....... ..++|.++|+++|+++|+
T Consensus 113 ~~~~i~~~i~~~~~~~~~~~~v~IDyl~ll~~~~~~~~~~~~~~~i~~~Lk~lA~~~~i~vi~ 175 (259)
T PF03796_consen 113 TIDDIESKIRRLKREGKKVDVVFIDYLQLLKSEDSSDNRRQEIGEISRELKALAKELNIPVIA 175 (259)
T ss_dssp BHHHHHHHHHHHHHHSTTEEEEEEEEGGGSBTSCSSSCCHHHHHHHHHHHHHHHHHHTSEEEE
T ss_pred CHHHHHHHHHHHHhhccCCCEEEechHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHcCCeEEE
Confidence 4566665554 2 5788999998754322 1112222 355789999999999996
No 495
>COG0062 Uncharacterized conserved protein [Function unknown]
Probab=21.49 E-value=2.5e+02 Score=25.38 Aligned_cols=66 Identities=24% Similarity=0.282 Sum_probs=45.0
Q ss_pred eEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCCC-cccccccccccCCCccee-eeccc
Q 013008 247 TAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLG-RTGYLWAHEHYGIFPDIM-TLAKP 316 (451)
Q Consensus 247 ~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~g-r~G~~~~~~~~~~~pdi~-t~sK~ 316 (451)
-.-+|+|.++|.|..-. .++-...+.+...+.+.++++=++=||+. .+|. ..-.-+.+|++ ||.+.
T Consensus 119 ~~dvIVDalfG~G~~g~-lrep~a~~Ie~iN~~~~pivAVDiPSGl~~dtG~---~~~~av~Ad~TVTf~~~ 186 (203)
T COG0062 119 SADVIVDALFGTGLSGP-LREPFASLIEAINASGKPIVAVDIPSGLDADTGE---VLGAAVKADLTVTFGAL 186 (203)
T ss_pred cCCEEEEeceecCCCCC-CccHHHHHHHHHHhcCCceEEEeCCCCcCCCCCc---ccCcceeccEEEEecCc
Confidence 45799999999976543 45556666666668999999999999973 3443 11223567754 77653
No 496
>cd01122 GP4d_helicase GP4d_helicase is a homohexameric 5'-3' helicases. Helicases couple NTP hydrolysis to the unwinding of nucleic acid duplexes into their component strands.
Probab=21.39 E-value=1.2e+02 Score=28.28 Aligned_cols=47 Identities=11% Similarity=0.128 Sum_probs=28.6
Q ss_pred HHhcCCCCeEEEEEccccCCCCcc---ccC----HHHHHHHHHHHHHhCCEEEE
Q 013008 239 RKLIQPGKTAAVFVEPIQGEGGIY---SAT----KEFLQFLRDACDDAGALLVF 285 (451)
Q Consensus 239 e~~l~~~~~aavi~ep~~~~~G~~---~~~----~~~l~~l~~l~~~~g~llI~ 285 (451)
++++...++..|++|+++...... ... ..++..|.++|+++|+.+++
T Consensus 133 ~~~~~~~~~~~vvID~l~~l~~~~~~~~~~~~~~~~~~~~L~~la~~~~vtvll 186 (271)
T cd01122 133 RYMAVSHGIQHIIIDNLSIMVSDERASGDERKALDEIMTKLRGFATEHGIHITL 186 (271)
T ss_pred HHHHhcCCceEEEECCHHHHhccCCCchhHHHHHHHHHHHHHHHHHHhCCEEEE
Confidence 333334568899999975432110 111 24456788999999986653
No 497
>cd01125 repA Hexameric Replicative Helicase RepA. RepA is encoded by a plasmid, which is found in most Gram negative bacteria. RepA is a 5'-3' DNA helicase which can utilize ATP, GTP and CTP to a lesser extent.
Probab=21.35 E-value=1.8e+02 Score=26.66 Aligned_cols=51 Identities=16% Similarity=0.299 Sum_probs=30.4
Q ss_pred HHHHHHhcCCCCeEEEEEccccCCCCcccc----CHHHHHHHHHHHHHhCCEEEE
Q 013008 235 IEATRKLIQPGKTAAVFVEPIQGEGGIYSA----TKEFLQFLRDACDDAGALLVF 285 (451)
Q Consensus 235 ~~~le~~l~~~~~aavi~ep~~~~~G~~~~----~~~~l~~l~~l~~~~g~llI~ 285 (451)
++.+.+.+...++..|++||...-.+.... -..+++.|.++++++|+.+++
T Consensus 100 ~~~l~~~~~~~~~~lvviDpl~~~~~~~~~d~~~~~~~~~~L~~~a~~~g~avl~ 154 (239)
T cd01125 100 FERIIEQLLIRRIDLVVIDPLVSFHGVSENDNGAMDAVIKALRRIAAQTGAAILL 154 (239)
T ss_pred HHHHHHHHHhcCCCEEEECChHHhCCCCcCCHHHHHHHHHHHHHHHHHhCCEEEE
Confidence 444444443446889999987542111111 224677888889888876553
No 498
>TIGR03677 rpl7ae 50S ribosomal protein L7Ae. Multifunctional RNA-binding protein that recognizes the K-turn motif in ribosomal RNA, box H/ACA, box C/D and box C'/D' sRNAs. Interacts with protein L15e.
Probab=21.21 E-value=1.4e+02 Score=24.28 Aligned_cols=50 Identities=18% Similarity=0.307 Sum_probs=33.2
Q ss_pred HHHHHhcCCCCeEEEEEccccCCCCccccCHHHHHHHHHHHHHhCCEEEEeccccCC
Q 013008 236 EATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGL 292 (451)
Q Consensus 236 ~~le~~l~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~ 292 (451)
..+.+.|+.++..+|++-..- .+.+..+.+..+|++++++++.-.....+
T Consensus 32 ~~v~kaikkgka~LVilA~D~-------s~~~~~~~i~~lc~~~~Ip~~~~~sk~eL 81 (117)
T TIGR03677 32 NEVTKAVERGIAKLVVIAEDV-------EPPEIVAHLPALCEEKGIPYVYVKKKEDL 81 (117)
T ss_pred HHHHHHHHcCCccEEEEeCCC-------CcHHHHHHHHHHHHHcCCCEEEeCCHHHH
Confidence 456666766667777764432 23345788999999999998866544333
No 499
>PRK11524 putative methyltransferase; Provisional
Probab=21.00 E-value=1.7e+02 Score=27.73 Aligned_cols=53 Identities=15% Similarity=0.264 Sum_probs=33.5
Q ss_pred CCHHHHHHhcCCCCeEEEEEccccCCCCccc-------------cCHHHHHHHHHHHHHhCCEEEE
Q 013008 233 GNIEATRKLIQPGKTAAVFVEPIQGEGGIYS-------------ATKEFLQFLRDACDDAGALLVF 285 (451)
Q Consensus 233 ~d~~~le~~l~~~~~aavi~ep~~~~~G~~~-------------~~~~~l~~l~~l~~~~g~llI~ 285 (451)
.|.-.+.+.+.+..+.+|+++|.++.+.... +-.+++.++.++.+..|.++|+
T Consensus 14 gD~~~~l~~l~~~siDlIitDPPY~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~rvLK~~G~i~i~ 79 (284)
T PRK11524 14 GDALTELKKIPSESVDLIFADPPYNIGKNFDGLIEAWKEDLFIDWLYEWIDECHRVLKKQGTMYIM 79 (284)
T ss_pred ccHHHHHHhcccCcccEEEECCCcccccccccccccccHHHHHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 3554544556666799999999876422110 0135667777777778877765
No 500
>PRK05409 hypothetical protein; Provisional
Probab=20.76 E-value=1.2e+02 Score=28.91 Aligned_cols=32 Identities=25% Similarity=0.309 Sum_probs=27.8
Q ss_pred CCCCccccCHHHHHHHHHHHHHhCCEEEEecc
Q 013008 257 GEGGIYSATKEFLQFLRDACDDAGALLVFDEV 288 (451)
Q Consensus 257 ~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv 288 (451)
+-||.-..++++|++|++++++++..+++|..
T Consensus 66 slGs~~~ld~~~L~~l~~l~~~~~~~~vSeHL 97 (281)
T PRK05409 66 SLGGAAPLDKDHLKRLKALADRYQPPLVSEHL 97 (281)
T ss_pred ccCCCCCCCHHHHHHHHHHHHHHCCCEEEeee
Confidence 34555678999999999999999999999976
Done!