Query 013012
Match_columns 451
No_of_seqs 317 out of 3653
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 20:34:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013012.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013012hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1yp2_A Glucose-1-phosphate ade 100.0 2.2E-45 7.6E-50 371.4 30.5 363 2-444 20-449 (451)
2 3brk_X Glucose-1-phosphate ade 100.0 4.5E-43 1.5E-47 351.1 30.0 343 2-431 12-391 (420)
3 3st8_A Bifunctional protein GL 100.0 1.1E-41 3.6E-46 348.3 35.9 363 3-448 13-446 (501)
4 2ggo_A 401AA long hypothetical 100.0 6.7E-40 2.3E-44 326.5 27.4 334 3-448 1-391 (401)
5 4fce_A Bifunctional protein GL 100.0 7.8E-39 2.7E-43 324.4 30.8 180 1-226 7-189 (459)
6 1hm9_A GLMU, UDP-N-acetylgluco 100.0 9.8E-39 3.3E-43 324.4 31.5 342 3-445 12-391 (468)
7 2v0h_A Bifunctional protein GL 100.0 7E-38 2.4E-42 317.1 32.3 304 1-404 4-324 (456)
8 3juk_A UDP-glucose pyrophospho 100.0 1.4E-30 4.8E-35 246.4 18.5 239 1-332 1-271 (281)
9 4ecm_A Glucose-1-phosphate thy 100.0 2.1E-28 7.2E-33 229.8 21.0 234 2-332 24-260 (269)
10 1tzf_A Glucose-1-phosphate cyt 100.0 1.5E-27 5E-32 223.0 20.0 228 1-331 1-250 (259)
11 2ux8_A Glucose-1-phosphate uri 99.9 3.2E-27 1.1E-31 225.0 16.0 187 2-223 14-226 (297)
12 1fxo_A Glucose-1-phosphate thy 99.9 1E-26 3.6E-31 220.4 18.9 186 1-224 1-187 (293)
13 2e3d_A UTP--glucose-1-phosphat 99.9 2.2E-26 7.5E-31 219.8 21.0 184 3-223 9-228 (302)
14 3pnn_A Conserved domain protei 99.9 3E-26 1E-30 218.5 21.1 201 1-224 4-229 (303)
15 2pa4_A UTP-glucose-1-phosphate 99.9 1.4E-26 4.9E-31 222.9 18.9 239 2-331 12-282 (323)
16 1lvw_A Glucose-1-phosphate thy 99.9 7.2E-26 2.4E-30 214.6 22.7 185 2-224 3-188 (295)
17 1mc3_A Glucose-1-phosphate thy 99.9 4.7E-26 1.6E-30 216.0 17.4 183 3-223 4-187 (296)
18 4evw_A Nucleoside-diphosphate- 99.9 1.5E-25 5.1E-30 208.2 19.2 168 5-218 2-180 (255)
19 2qh5_A PMI, ALGA, mannose-6-ph 99.9 1.9E-25 6.6E-30 213.6 17.4 190 1-224 3-202 (308)
20 3oam_A 3-deoxy-manno-octuloson 99.9 6.5E-24 2.2E-28 197.0 17.9 191 1-226 1-198 (252)
21 2x65_A Mannose-1-phosphate gua 99.9 1.3E-23 4.4E-28 202.7 17.5 186 3-221 2-201 (336)
22 2cu2_A Putative mannose-1-phos 99.9 6.1E-23 2.1E-27 198.0 14.3 181 1-221 1-198 (337)
23 1jyk_A LICC protein, CTP:phosp 99.9 1.2E-22 4.1E-27 188.8 15.5 167 1-223 24-193 (254)
24 3k8d_A 3-deoxy-manno-octuloson 99.9 1.9E-21 6.6E-26 180.6 18.4 190 1-225 17-213 (264)
25 3tqd_A 3-deoxy-manno-octuloson 99.9 5.3E-21 1.8E-25 176.9 18.3 191 1-226 8-207 (256)
26 4fcu_A 3-deoxy-manno-octuloson 99.8 7.2E-19 2.5E-23 162.4 17.7 187 3-224 2-197 (253)
27 2y6p_A 3-deoxy-manno-octuloson 99.8 1.5E-18 5E-23 159.2 19.4 178 1-225 1-182 (234)
28 1h7e_A 3-deoxy-manno-octuloson 99.8 6.7E-18 2.3E-22 155.9 19.1 123 1-140 1-129 (245)
29 1vic_A 3-deoxy-manno-octuloson 99.8 5.5E-18 1.9E-22 158.1 17.7 189 1-224 1-200 (262)
30 2icy_A Probable UTP-glucose-1- 99.7 9.6E-17 3.3E-21 159.3 21.6 193 2-226 79-310 (469)
31 3f1c_A Putative 2-C-methyl-D-e 99.7 2.7E-17 9.4E-22 151.8 15.3 129 1-136 2-140 (246)
32 1ezi_A CMP-N-acetylneuraminic 99.7 1.5E-17 5E-22 151.9 12.4 123 1-139 3-135 (228)
33 2dpw_A Hypothetical protein TT 99.7 6.2E-18 2.1E-22 154.8 9.8 118 1-139 1-120 (232)
34 2xme_A CTP-inositol-1-phosphat 99.7 1.4E-16 4.7E-21 145.8 16.8 103 2-116 18-121 (232)
35 2vsh_A TARI, 2-C-methyl-D-eryt 99.7 1.3E-16 4.4E-21 146.4 16.0 123 3-131 3-136 (236)
36 2iu8_A LPXD, UDP-3-O-[3-hydrox 99.7 2E-16 6.9E-21 154.9 16.7 72 342-413 151-244 (374)
37 2xwl_A 2-C-methyl-D-erythritol 99.7 4.2E-16 1.4E-20 141.6 17.3 114 1-126 1-118 (223)
38 2yc3_A 2-C-methyl-D-erythritol 99.7 2.4E-16 8.3E-21 143.8 14.4 120 2-131 4-128 (228)
39 1vgw_A 4-diphosphocytidyl-2C-m 99.7 1.9E-15 6.3E-20 138.1 17.3 119 1-130 5-133 (231)
40 1qwj_A Cytidine monophospho-N- 99.6 1E-15 3.5E-20 139.7 13.2 121 1-137 2-131 (229)
41 2i5k_A UTP--glucose-1-phosphat 99.6 2.5E-15 8.5E-20 150.1 16.8 192 2-226 92-323 (488)
42 3r8y_A 2,3,4,5-tetrahydropyrid 99.6 2.9E-15 1E-19 137.6 15.2 133 312-447 53-199 (240)
43 2wee_A MOBA-related protein; u 99.6 1.3E-15 4.6E-20 135.4 11.2 112 1-125 4-120 (197)
44 2waw_A MOBA relate protein; un 99.6 2.2E-15 7.4E-20 134.3 11.4 118 1-133 4-126 (199)
45 3rsb_A Adenosylcobinamide-phos 99.6 3.8E-16 1.3E-20 139.0 6.0 117 3-128 1-119 (196)
46 1xhd_A Putative acetyltransfer 99.6 8.7E-15 3E-19 127.4 14.5 104 343-446 10-123 (173)
47 1i52_A 4-diphosphocytidyl-2-C- 99.6 1.4E-14 4.9E-19 132.7 16.5 119 1-130 6-128 (236)
48 3ixc_A Hexapeptide transferase 99.6 7.4E-15 2.5E-19 129.9 14.1 105 342-446 30-145 (191)
49 3q80_A 2-C-methyl-D-erythritol 99.6 9.2E-14 3.1E-18 126.3 18.6 113 3-128 8-127 (231)
50 3tv0_A Dynactin subunit 6; LEF 99.6 2.7E-14 9.1E-19 126.7 14.6 103 344-446 11-135 (194)
51 3kwd_A Carbon dioxide concentr 99.6 2.2E-14 7.5E-19 129.3 13.9 107 340-446 52-178 (213)
52 3r3r_A Ferripyochelin binding 99.6 2.2E-14 7.4E-19 126.6 13.3 101 345-445 15-132 (187)
53 1v3w_A Ferripyochelin binding 99.6 2.7E-14 9.1E-19 124.3 13.5 100 345-444 10-119 (173)
54 3mqg_A Lipopolysaccharides bio 99.6 5E-14 1.7E-18 124.8 15.0 105 343-447 13-136 (192)
55 3kwd_A Carbon dioxide concentr 99.6 4.7E-14 1.6E-18 127.1 15.0 102 345-446 39-161 (213)
56 3d5n_A Q97W15_sulso; NESG, SSR 99.6 6.1E-15 2.1E-19 131.3 8.9 114 1-133 1-118 (197)
57 3r1w_A Carbonic anhydrase; bet 99.5 5.4E-14 1.8E-18 124.3 13.2 100 346-445 20-136 (189)
58 1jv1_A Glcnac1P uridyltransfer 99.5 2.3E-13 7.8E-18 136.5 18.4 193 2-226 102-344 (505)
59 3vbi_A ANTD, galactoside O-ace 99.5 3.2E-14 1.1E-18 127.4 10.8 101 347-447 34-168 (205)
60 1qre_A Carbonic anhydrase; bet 99.5 1.7E-13 5.7E-18 126.2 15.1 102 345-446 77-207 (247)
61 1e5k_A Molybdopterin-guanine d 99.5 4.2E-14 1.5E-18 126.1 10.3 108 1-125 5-116 (201)
62 1qre_A Carbonic anhydrase; bet 99.5 2.6E-13 8.8E-18 125.0 14.5 105 342-446 56-190 (247)
63 1vpa_A 2-C-methyl-D-erythritol 99.5 7.6E-14 2.6E-18 127.7 10.6 119 2-131 13-137 (234)
64 3r0s_A Acyl-[acyl-carrier-prot 99.5 5.4E-13 1.8E-17 124.3 16.0 111 336-446 25-177 (266)
65 1j2z_A Acyl-[acyl-carrier-prot 99.5 5.6E-13 1.9E-17 124.3 15.6 32 415-446 141-173 (270)
66 3r0s_A Acyl-[acyl-carrier-prot 99.5 6.9E-13 2.4E-17 123.5 16.1 106 340-445 11-140 (266)
67 4eqy_A Acyl-[acyl-carrier-prot 99.5 5.6E-13 1.9E-17 125.3 15.5 105 340-444 47-192 (283)
68 1xhd_A Putative acetyltransfer 99.5 2.7E-13 9.3E-18 117.9 12.3 102 344-445 29-141 (173)
69 2qia_A UDP-N-acetylglucosamine 99.5 7.7E-13 2.6E-17 123.1 16.1 102 344-445 34-176 (262)
70 4eqy_A Acyl-[acyl-carrier-prot 99.5 4.4E-13 1.5E-17 126.0 14.5 105 341-445 30-157 (283)
71 3c8v_A Putative acetyltransfer 99.5 2E-13 6.9E-18 136.3 12.7 98 348-445 276-378 (496)
72 3fs8_A QDTC; acetyltransferase 99.5 7.8E-13 2.7E-17 123.8 15.7 104 339-442 14-135 (273)
73 1v3w_A Ferripyochelin binding 99.5 2.4E-13 8.1E-18 118.2 11.1 101 344-444 27-138 (173)
74 4e6u_A Acyl-[acyl-carrier-prot 99.5 9.1E-13 3.1E-17 122.7 15.6 111 335-445 27-178 (265)
75 4e6u_A Acyl-[acyl-carrier-prot 99.5 8.1E-13 2.8E-17 123.1 15.2 104 341-444 15-141 (265)
76 2pig_A Putative transferase; S 99.5 4.1E-13 1.4E-17 127.9 13.2 108 338-445 57-193 (334)
77 3r3r_A Ferripyochelin binding 99.5 2.9E-13 9.8E-18 119.4 11.3 99 343-441 31-146 (187)
78 3bfp_A Acetyltransferase; LEFT 99.5 1.8E-12 6.3E-17 114.7 16.5 63 382-444 109-174 (194)
79 3hsq_A Acyl-[acyl-carrier-prot 99.5 1E-12 3.5E-17 121.9 15.5 110 337-446 22-172 (259)
80 3pmo_A UDP-3-O-[3-hydroxymyris 99.5 1.2E-12 4.2E-17 127.3 16.7 33 397-429 222-259 (372)
81 2px7_A 2-C-methyl-D-erythritol 99.5 1.6E-13 5.6E-18 125.6 10.0 112 1-132 24-137 (236)
82 3ixc_A Hexapeptide transferase 99.5 6.8E-13 2.3E-17 117.3 13.6 97 345-441 51-158 (191)
83 4e79_A UDP-3-O-acylglucosamine 99.5 1.2E-12 4.1E-17 126.8 16.5 61 352-412 121-183 (357)
84 3eh0_A UDP-3-O-[3-hydroxymyris 99.5 1.6E-12 5.4E-17 125.4 17.2 67 346-412 110-178 (341)
85 2ggo_A 401AA long hypothetical 99.5 3.5E-13 1.2E-17 133.4 12.8 86 345-430 244-330 (401)
86 3hsq_A Acyl-[acyl-carrier-prot 99.5 1.4E-12 4.8E-17 121.0 16.1 104 340-443 7-133 (259)
87 3r8y_A 2,3,4,5-tetrahydropyrid 99.4 8.5E-13 2.9E-17 121.1 14.2 100 341-441 99-209 (240)
88 2e8b_A Probable molybdopterin- 99.4 1.1E-13 3.7E-18 123.5 7.5 103 2-123 14-120 (201)
89 1w55_A ISPD/ISPF bifunctional 99.4 2.4E-13 8.3E-18 131.7 10.4 114 1-130 2-118 (371)
90 3tv0_A Dynactin subunit 6; LEF 99.4 1.4E-12 4.9E-17 115.5 14.5 101 344-444 29-151 (194)
91 3pmo_A UDP-3-O-[3-hydroxymyris 99.4 1.8E-12 6.2E-17 126.2 16.4 104 342-445 164-312 (372)
92 3ngw_A Molybdopterin-guanine d 99.4 2.9E-13 9.9E-18 121.1 9.9 113 3-134 1-116 (208)
93 3eg4_A 2,3,4,5-tetrahydropyrid 99.4 6E-13 2E-17 125.4 12.1 103 343-446 139-266 (304)
94 3eh0_A UDP-3-O-[3-hydroxymyris 99.4 1.8E-12 6.1E-17 125.1 15.6 30 415-444 259-289 (341)
95 3vbi_A ANTD, galactoside O-ace 99.4 7.4E-13 2.5E-17 118.5 12.0 117 324-441 29-178 (205)
96 3t57_A UDP-N-acetylglucosamine 99.4 2.1E-12 7.3E-17 122.6 15.8 30 416-445 170-200 (305)
97 4e79_A UDP-3-O-acylglucosamine 99.4 2E-12 6.9E-17 125.3 15.5 13 209-221 59-71 (357)
98 1j2z_A Acyl-[acyl-carrier-prot 99.4 1.9E-12 6.6E-17 120.6 14.7 64 381-444 80-153 (270)
99 4ea9_A Perosamine N-acetyltran 99.4 3.3E-12 1.1E-16 115.6 15.8 32 398-429 148-180 (220)
100 2qia_A UDP-N-acetylglucosamine 99.4 2.6E-12 8.8E-17 119.5 15.1 105 340-444 12-139 (262)
101 3r1w_A Carbonic anhydrase; bet 99.4 8.8E-13 3E-17 116.4 11.4 99 343-441 35-150 (189)
102 3fs8_A QDTC; acetyltransferase 99.4 4.5E-12 1.5E-16 118.7 15.2 85 364-448 71-159 (273)
103 3gos_A 2,3,4,5-tetrahydropyrid 99.4 1.6E-12 5.3E-17 121.3 11.8 87 344-431 115-212 (276)
104 3t57_A UDP-N-acetylglucosamine 99.4 6.7E-12 2.3E-16 119.1 15.4 57 339-395 31-92 (305)
105 3tk8_A 2,3,4,5-tetrahydropyrid 99.4 1.2E-12 4.1E-17 123.7 9.9 83 347-430 153-252 (316)
106 3c8v_A Putative acetyltransfer 99.4 2.2E-12 7.5E-17 128.8 12.3 97 344-441 290-394 (496)
107 2iu8_A LPXD, UDP-3-O-[3-hydrox 99.4 9.1E-12 3.1E-16 121.8 16.1 105 342-446 169-319 (374)
108 3r5d_A Tetrahydrodipicolinate 99.4 6.9E-13 2.4E-17 123.1 7.2 49 381-430 231-288 (347)
109 3mqg_A Lipopolysaccharides bio 99.4 7.3E-12 2.5E-16 110.8 13.0 94 346-440 34-145 (192)
110 3bfp_A Acetyltransferase; LEFT 99.3 1.5E-11 5E-16 108.9 14.6 88 342-429 78-176 (194)
111 3gos_A 2,3,4,5-tetrahydropyrid 99.3 7.1E-12 2.4E-16 116.8 13.2 49 347-396 112-161 (276)
112 3jqy_B NEUO, polysialic acid O 99.3 3.5E-12 1.2E-16 117.8 10.8 50 348-397 88-143 (252)
113 3tk8_A 2,3,4,5-tetrahydropyrid 99.3 4.7E-12 1.6E-16 119.6 11.8 94 350-444 144-249 (316)
114 1hm9_A GLMU, UDP-N-acetylgluco 99.3 3.1E-12 1.1E-16 129.3 11.3 98 345-444 292-415 (468)
115 3eg4_A 2,3,4,5-tetrahydropyrid 99.3 5E-12 1.7E-16 119.1 11.6 63 382-444 160-233 (304)
116 3fsy_A Tetrahydrodipicolinate 99.3 2.5E-12 8.6E-17 118.5 9.0 100 343-443 165-281 (332)
117 4ea9_A Perosamine N-acetyltran 99.3 1.9E-11 6.5E-16 110.5 14.3 87 345-431 111-200 (220)
118 3fsy_A Tetrahydrodipicolinate 99.3 9.3E-12 3.2E-16 114.7 11.7 97 347-445 157-263 (332)
119 2wlg_A Polysialic acid O-acety 99.3 1.3E-11 4.3E-16 111.2 11.7 101 345-445 36-169 (215)
120 2pig_A Putative transferase; S 99.3 1.4E-11 4.9E-16 117.2 11.9 105 341-446 79-216 (334)
121 3r5d_A Tetrahydrodipicolinate 99.3 7.9E-12 2.7E-16 116.1 9.3 96 348-445 181-286 (347)
122 2oeg_A UTP-glucose-1-phosphate 99.3 1.5E-11 5.2E-16 122.6 11.4 134 2-141 75-250 (505)
123 3jqy_B NEUO, polysialic acid O 99.2 3.7E-11 1.3E-15 110.9 10.7 104 345-448 63-198 (252)
124 3q1x_A Serine acetyltransferas 99.2 2.7E-11 9.2E-16 113.8 9.6 87 345-431 163-258 (313)
125 4fce_A Bifunctional protein GL 99.2 4.3E-11 1.5E-15 120.5 11.7 34 414-447 397-431 (459)
126 3brk_X Glucose-1-phosphate ade 99.2 5.3E-11 1.8E-15 118.4 10.6 86 362-448 301-391 (420)
127 3nz2_A Hexapeptide-repeat cont 99.2 5.2E-11 1.8E-15 105.3 8.8 85 344-431 61-167 (195)
128 2yqc_A UDP-N-acetylglucosamine 99.2 5.7E-10 2E-14 111.5 17.3 192 2-225 103-351 (486)
129 3hjj_A Maltose O-acetyltransfe 99.2 2.5E-10 8.4E-15 100.6 13.1 91 345-440 64-177 (190)
130 3oc9_A UDP-N-acetylglucosamine 99.2 8.7E-10 3E-14 106.5 17.8 191 2-224 35-275 (405)
131 2rij_A Putative 2,3,4,5-tetrah 99.2 9.5E-11 3.3E-15 112.2 11.0 15 212-226 82-96 (387)
132 3srt_A Maltose O-acetyltransfe 99.2 1.8E-10 6E-15 101.3 11.1 86 344-432 61-168 (188)
133 3st8_A Bifunctional protein GL 99.1 1.9E-10 6.3E-15 117.1 12.3 89 341-429 279-401 (501)
134 3mc4_A WW/RSP5/WWP domain:bact 99.1 2.2E-10 7.4E-15 106.0 11.1 34 398-431 217-251 (287)
135 3ftt_A Putative acetyltransfer 99.1 1.8E-10 6.2E-15 102.2 9.9 93 344-440 59-173 (199)
136 2p2o_A Maltose transacetylase; 99.1 2E-10 6.8E-15 100.5 9.8 81 362-443 73-176 (185)
137 3q1x_A Serine acetyltransferas 99.1 2.5E-10 8.6E-15 107.2 10.9 91 349-445 161-255 (313)
138 1ocx_A Maltose O-acetyltransfe 99.1 3.4E-10 1.1E-14 98.7 10.9 94 345-442 58-173 (182)
139 2wlg_A Polysialic acid O-acety 99.1 2.4E-10 8.1E-15 102.8 10.1 95 346-441 59-181 (215)
140 3f1x_A Serine acetyltransferas 99.1 4.1E-10 1.4E-14 105.5 11.8 93 345-443 190-297 (310)
141 1yp2_A Glucose-1-phosphate ade 99.1 1.7E-10 5.8E-15 115.9 8.9 79 366-446 317-414 (451)
142 1krr_A Galactoside O-acetyltra 99.1 5.9E-10 2E-14 98.7 11.1 92 344-440 60-174 (203)
143 2v0h_A Bifunctional protein GL 99.1 2.1E-10 7.2E-15 115.4 8.7 83 363-445 300-383 (456)
144 1ssq_A SAT, serine acetyltrans 99.1 1.4E-09 4.7E-14 100.0 12.6 86 345-440 137-232 (267)
145 4hur_A Virginiamycin A acetylt 99.0 1.1E-09 3.7E-14 98.8 10.6 95 345-440 29-162 (220)
146 2rij_A Putative 2,3,4,5-tetrah 99.0 8.4E-10 2.9E-14 105.7 10.3 28 415-443 291-318 (387)
147 3nz2_A Hexapeptide-repeat cont 99.0 1.5E-09 5.3E-14 95.8 11.0 40 340-379 71-112 (195)
148 1t3d_A SAT, serine acetyltrans 99.0 2.4E-09 8.2E-14 99.2 12.6 84 345-440 157-252 (289)
149 3hjj_A Maltose O-acetyltransfe 99.0 3E-09 1E-13 93.6 12.7 36 343-378 76-113 (190)
150 3srt_A Maltose O-acetyltransfe 99.0 1.3E-09 4.4E-14 95.7 10.1 70 344-413 75-166 (188)
151 3ftt_A Putative acetyltransfer 99.0 1.1E-09 3.7E-14 97.2 9.3 37 342-378 71-109 (199)
152 4hur_A Virginiamycin A acetylt 99.0 4.8E-10 1.7E-14 101.1 7.1 34 414-447 119-153 (220)
153 3mc4_A WW/RSP5/WWP domain:bact 99.0 1.5E-09 5.2E-14 100.3 10.3 74 343-416 168-253 (287)
154 1krr_A Galactoside O-acetyltra 98.9 8.9E-09 3E-13 91.1 11.7 87 342-430 72-175 (203)
155 3f1x_A Serine acetyltransferas 98.9 5.5E-09 1.9E-13 97.9 10.4 15 382-396 218-232 (310)
156 1ssq_A SAT, serine acetyltrans 98.9 1.1E-08 3.9E-13 93.9 11.9 75 341-415 139-225 (267)
157 1t3d_A SAT, serine acetyltrans 98.8 1.7E-08 5.9E-13 93.5 11.9 75 341-415 159-245 (289)
158 2p2o_A Maltose transacetylase; 98.8 2.2E-08 7.5E-13 87.5 10.5 73 341-413 70-164 (185)
159 1ocx_A Maltose O-acetyltransfe 98.8 4.8E-08 1.6E-12 85.0 12.0 71 343-413 70-162 (182)
160 3eev_A Chloramphenicol acetylt 98.7 3.9E-08 1.3E-12 88.0 9.1 44 397-441 111-155 (212)
161 4e8l_A Virginiamycin A acetylt 98.7 3.8E-08 1.3E-12 88.1 8.6 26 370-395 54-80 (219)
162 3eev_A Chloramphenicol acetylt 98.6 1.1E-07 3.6E-12 85.1 9.7 13 382-394 60-72 (212)
163 1mr7_A Streptogramin A acetylt 98.6 3E-08 1E-12 88.2 4.3 43 397-440 113-156 (209)
164 1xat_A Xenobiotic acetyltransf 98.5 3E-07 1E-11 81.8 8.2 33 398-430 111-144 (212)
165 4e8l_A Virginiamycin A acetylt 98.4 1.2E-06 4E-11 78.4 9.0 45 396-441 117-162 (219)
166 1mr7_A Streptogramin A acetylt 98.3 1.1E-06 3.6E-11 78.2 6.5 32 414-445 113-145 (209)
167 1xat_A Xenobiotic acetyltransf 98.1 1.7E-05 5.7E-10 70.5 10.5 68 379-446 55-143 (212)
168 2i5e_A Hypothetical protein MM 97.8 2E-05 6.9E-10 70.1 5.7 104 2-124 3-111 (211)
169 3r3i_A UTP--glucose-1-phosphat 97.5 0.0032 1.1E-07 62.5 16.4 66 2-72 127-198 (528)
170 3gue_A UTP-glucose-1-phosphate 97.0 0.011 3.9E-07 58.1 14.5 134 2-140 76-249 (484)
171 3ogz_A UDP-sugar pyrophosphory 96.7 0.0047 1.6E-07 62.5 9.4 132 3-139 115-300 (630)
172 1qg8_A Protein (spore coat pol 90.4 1.6 5.5E-05 38.7 10.2 93 34-129 13-116 (255)
173 3bcv_A Putative glycosyltransf 90.2 0.83 2.8E-05 40.2 8.0 102 29-135 11-118 (240)
174 3cgx_A Putative nucleotide-dip 87.6 1.2 3.9E-05 39.9 6.9 87 34-128 37-130 (242)
175 1xhb_A Polypeptide N-acetylgal 86.6 3.5 0.00012 40.6 10.5 102 29-133 35-146 (472)
176 2d7i_A Polypeptide N-acetylgal 83.1 4.4 0.00015 41.1 9.6 99 29-131 118-226 (570)
177 2ffu_A Ppgalnact-2, polypeptid 77.0 8.9 0.00031 38.0 9.3 99 29-132 72-177 (501)
178 2z86_A Chondroitin synthase; G 67.8 13 0.00044 38.0 8.2 96 29-129 381-482 (625)
179 2z86_A Chondroitin synthase; G 58.9 51 0.0017 33.4 10.7 103 28-133 98-206 (625)
180 3f1y_A Mannosyl-3-phosphoglyce 47.1 32 0.0011 32.7 6.4 104 28-138 99-218 (387)
181 3ckj_A Putative uncharacterize 46.5 78 0.0027 29.0 8.9 103 29-134 54-166 (329)
182 4hg6_A Cellulose synthase subu 43.4 97 0.0033 32.6 10.0 97 28-129 145-266 (802)
183 3l7i_A Teichoic acid biosynthe 35.6 7.8 0.00027 40.6 0.0 91 35-127 15-109 (729)
184 4fix_A UDP-galactofuranosyl tr 34.4 1E+02 0.0035 31.6 8.2 96 32-131 190-298 (657)
185 2xvy_A Chelatase, putative; me 27.3 1E+02 0.0034 27.4 6.0 25 33-57 63-87 (269)
186 3toe_A MTH10B, DNA/RNA-binding 23.6 1E+02 0.0034 22.6 4.2 35 28-62 6-42 (91)
187 1fo8_A Alpha-1,3-mannosyl-glyc 21.7 2.3E+02 0.0078 26.3 7.4 93 28-125 7-122 (343)
No 1
>1yp2_A Glucose-1-phosphate adenylyltransferase small subunit; ADP-glucose synthase, ADP-glucose pyrophosphorylase, agpase B; HET: PMB; 2.11A {Solanum tuberosum} SCOP: b.81.1.4 c.68.1.6 PDB: 1yp3_A* 1yp4_A*
Probab=100.00 E-value=2.2e-45 Score=371.40 Aligned_cols=363 Identities=20% Similarity=0.332 Sum_probs=254.8
Q ss_pred CceEEEEecCCCCCCCCCCCCCCcccccccCCc-chHHHHHHHHHHCCCcEEEEEecCchhhHHHHHhhhhhc---cC--
Q 013012 2 DFQVVVLAGGTSKKLVPLVSKEVPKALLPVANR-PVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAY---VD-- 75 (451)
Q Consensus 2 ~~~avIlAgG~g~Rl~pl~~~~~pK~llpv~gk-pli~~~l~~l~~~gi~~iivv~~~~~~~~~i~~~~~~~~---~~-- 75 (451)
+|+|||||||.|+||+|| |...||+|+|++|+ |||+|++++|.++|+++++|+++++. +.+.+++.+.+ ..
T Consensus 20 ~~~avILAaG~gtRl~pl-T~~~pK~llpi~g~~pli~~~l~~l~~~g~~~i~vv~~~~~--~~i~~~~~~~~~~~~~~~ 96 (451)
T 1yp2_A 20 SVLGIILGGGAGTRLYPL-TKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNS--ASLNRHLSRAYASNMGGY 96 (451)
T ss_dssp HEEEEEC------CCTTT-TTTSCGGGCEETTTEETTHHHHHHHHHTTCCEEEEEESCCC--HHHHHHHHHHCC------
T ss_pred ceEEEEECCCCCCcccch-hcCCcceeeEECCcceeHHHHHHHHHHCCCCEEEEEeccCH--HHHHHHHhhhhhcccccc
Confidence 389999999999999999 88999999999999 99999999999999999999998652 35556554422 10
Q ss_pred --ceeeEEEEc--C-----CCCChHHHHHHHHhcCC---CCcEEEEcCCccCCCCchHHHHHHHhcCceEEEEEeeeccC
Q 013012 76 --RLHVEVATV--P-----EDVGTAGALRAIAHHLT---AKDVLVVSGDLVSDVPPGAVTAAHRRHDAVVTAMICSVPVS 143 (451)
Q Consensus 76 --~~~~~i~~~--~-----~~~gt~~~l~~~~~~l~---~~~~lvl~~D~i~~~~~~~~l~~~~~~~~~~t~~~~~~~~~ 143 (451)
...+.++.. . ...||+++++.+++++. .++|+|++||.+++.++.++++.|++.++++|+++.+.+..
T Consensus 97 ~~~~~v~i~~~~~~~~~~~~~~Gt~~al~~a~~~~~~~~~~~~lv~~~D~~~~~~l~~l~~~~~~~~~~~tl~~~~~~~~ 176 (451)
T 1yp2_A 97 KNEGFVEVLAAQQSPENPDWFQGTADAVRQYLWLFEEHTVLEYLILAGDHLYRMDYEKFIQAHRETDADITVAALPMDEK 176 (451)
T ss_dssp --CCEEEEEESCSSTTSCCCCCSHHHHHHHTHHHHTTSCCSEEEEECSCEECCCCHHHHHHHHHHTTCSEEEEEEEECHH
T ss_pred cccCcEEEecccccccccccccCcHHHHHHHHHHHHhcCCCeEEEecCcEEEcCCHHHHHHHHHHcCCcEEEEEEEcChh
Confidence 011344431 1 14799999999988774 46799999999889999999999998888888887654311
Q ss_pred CCccCCCCCCcccCCCCCcccEEEecCCCceEEEeecccccc--ccccccHHHHhhcCee-EEecCCccceEEeechHHH
Q 013012 144 GLSEAGSSGAKDKTKKPGRYNIIGMDPTKQFLLHIATGAELE--KDTRIRKSILRAVGQM-DIRADLMDAHMYAFNRSVL 220 (451)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~l~~~~~~~~~e--k~~~i~~~~~~~~~~~-~~~s~l~~~giYi~~~~~l 220 (451)
.+..||++.+|+++++ ..+.++++.+ +...++..++.+++.. ...++++++|+|+|++++|
T Consensus 177 ---------------~~~~~g~v~~d~~~~v-~~~~ekp~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~Giy~~~~~~l 240 (451)
T 1yp2_A 177 ---------------RATAFGLMKIDEEGRI-IEFAEKPQGEQLQAMKVDTTILGLDDKRAKEMPFIASMGIYVISKDVM 240 (451)
T ss_dssp ---------------HHTTSEEEEECTTSBE-EEEEESCCHHHHHHTCCCGGGGSCCHHHHHHCCEEEEEEEEEEEHHHH
T ss_pred ---------------hcccCCEEEECCCCCE-EEEEECCCchhhccccccccccccccccccCCcceEEeeEEEEcHHHH
Confidence 1356899999977764 4555322111 0011222222221110 0024688999999999998
Q ss_pred HHHHhcC-ccccccccchhhHHHHhccccccccCCCCCCccccccCCCcchhhhhccCCCCCccccccCCCCCCCCCCCc
Q 013012 221 QEVLDQK-DKFQSLKQDVLPYLVRSQLKSEILINGAPQGQQAKENGNDKVSYRILANASTPSFHELYALGPNGSAPVRRT 299 (451)
Q Consensus 221 ~~~~~~~-~~~~s~~~d~lp~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (451)
..+++.. ....++.+|+++.+++++
T Consensus 241 ~~~l~~~~~~~~~~~~~~l~~~i~~g------------------------------------------------------ 266 (451)
T 1yp2_A 241 LNLLRDKFPGANDFGSEVIPGATSLG------------------------------------------------------ 266 (451)
T ss_dssp HHHHHTTCTTCCCTTTTHHHHHHHTT------------------------------------------------------
T ss_pred HHHHHhhcccccchHhhHHHHHHhcC------------------------------------------------------
Confidence 6665543 233456678888776542
Q ss_pred ceeEEEEeccchhhhhccCHHHHHHHchhccccccccCCccccCC------CceeCCCCeeCCCcEECCCCEECCCCEEC
Q 013012 300 HKCCVYIASNSKYCVRLNSIQAFMDINRDVIGEANHLSGYNFSAQ------NNIIHPSAELGSKTTVGPHCMLGEGSQMG 373 (451)
Q Consensus 300 ~~~~~~~~~~~~~~~~i~~~~~y~~~~~~~l~~~~~~~~~~~~~~------~~~i~~~~~i~~~~~i~~~~~i~~~~~i~ 373 (451)
.++++| +..++|.+++++++|+++++.++.... .+..++++ .+.+++++.+ .++.| .++.||++|.|+
T Consensus 267 ~~v~~~--~~~~~w~digt~~~l~~a~~~l~~~~~--~~~~~~~~~~~i~~~~~i~~~~~i-~~~~I-~~~~Ig~~~~I~ 340 (451)
T 1yp2_A 267 MRVQAY--LYDGYWEDIGTIEAFYNANLGITKKPV--PDFSFYDRSAPIYTQPRYLPPSKM-LDADV-TDSVIGEGCVIK 340 (451)
T ss_dssp CCEEEE--ECCSCCEECSSHHHHHHHHHGGGCSSS--CSSCSCCSSSCCCCCCCCCCCEEE-EEEEE-EEEEECTTCEEE
T ss_pred CceEEE--EeCCEEEECCCHHHHHHHHHHHhcccc--cchhccCCCCeeccCCccCCCeEE-cceEE-eCeEECCCCEEc
Confidence 123444 346799999999999999998876531 11122233 3444444444 34555 467888888887
Q ss_pred CCCEEeceEECCCCEECCCcEEeceEECCC-------------------CEECCCcEEeCeEECCCCEECCCcEEcc---
Q 013012 374 DKCSVKRSVIGRHCRIGSNVKVVNSVVMNH-------------------VTIGDGCSIQGSVICSNAQLQERVALKD--- 431 (451)
Q Consensus 374 ~~~~i~~svig~~~~ig~~~~i~~s~i~~~-------------------~~Ig~~~~i~~~ii~~~~~i~~~~~i~~--- 431 (451)
. |.|.+++||++|.||++|+|.+++++.+ +.||++|.|++++||++++||++++|.+
T Consensus 341 ~-~~i~~~~Ig~~~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~~~g~~~~~Ig~~~~i~~~~Ig~~~~IG~~~~i~~~~~ 419 (451)
T 1yp2_A 341 N-CKIHHSVVGLRSCISEGAIIEDSLLMGADYYETDADRKLLAAKGSVPIGIGKNCHIKRAIIDKNARIGDNVKIINKDN 419 (451)
T ss_dssp E-EEEESCEECTTCEECTTCEEESCEECCCSSCCCHHHHHHHHTTTCCCSEECTTCEEESEEECTTCEECTTCEECCSSC
T ss_pred c-eEEeccEECCCCEECCCCEEcCceEECCCCcccccccccccccCceeEEECCCCEEeccEeCCCcEECCCCEEeCCcc
Confidence 6 7888999999999999999999988888 9999999999999999999999998874
Q ss_pred -----------------eEECCCCEECCCC
Q 013012 432 -----------------CQVLSLSTSVFLS 444 (451)
Q Consensus 432 -----------------~~ig~~~~i~~~~ 444 (451)
++||++++|++++
T Consensus 420 ~~~~~~ig~~~~ig~~~v~Ig~~a~i~ags 449 (451)
T 1yp2_A 420 VQEAARETDGYFIKSGIVTVIKDALIPSGI 449 (451)
T ss_dssp CSCEEEGGGTEEEETTEEEECTTCEECTTC
T ss_pred cccCceeCCCEEEcCCEEEECCCcEECCCc
Confidence 3566666666665
No 2
>3brk_X Glucose-1-phosphate adenylyltransferase; ADP-glucose pyrophosphorylase, allostery, kinetics, structure-function relationships; 2.10A {Agrobacterium tumefaciens}
Probab=100.00 E-value=4.5e-43 Score=351.05 Aligned_cols=343 Identities=17% Similarity=0.237 Sum_probs=249.5
Q ss_pred CceEEEEecCCCCCCCCCCCCCCcccccccCCc-chHHHHHHHHHHCCCcEEEEEecCchhhHHHHHhhhhhcc-C----
Q 013012 2 DFQVVVLAGGTSKKLVPLVSKEVPKALLPVANR-PVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYV-D---- 75 (451)
Q Consensus 2 ~~~avIlAgG~g~Rl~pl~~~~~pK~llpv~gk-pli~~~l~~l~~~gi~~iivv~~~~~~~~~i~~~~~~~~~-~---- 75 (451)
+++|||||||.|+||+|| |...||+|+|++|+ |||+|++++|.++|+++++|+++++ .+.+.+++.+.+. .
T Consensus 12 ~~~avILAaG~gtRl~pl-T~~~pK~llpi~gk~pli~~~l~~l~~~gi~~i~vv~~~~--~~~i~~~~~~~~~~~~~~~ 88 (420)
T 3brk_X 12 DAMAYVLAGGRGSRLKEL-TDRRAKPAVYFGGKARIIDFALSNALNSGIRRIGVATQYK--AHSLIRHLQRGWDFFRPER 88 (420)
T ss_dssp GEEEEEEECCCCGGGGGG-GSSSCGGGSEETTTEETHHHHHHHHHHTTCCEEEEEECTT--CHHHHHHHHHHSCCCCGGG
T ss_pred ceEEEEEcCCCCCccchh-hcCCcccccccCCCCcHHHHHHHHHHhCCCCeEEEEeCCC--hHHHHHHHhhhhccccccc
Confidence 478999999999999999 88999999999999 9999999999999999999999864 2456666654221 1
Q ss_pred ceeeEEEEcC----CC---CChHHHHHHHHhcCC---CCcEEEEcCCccCCCCchHHHHHHHhcCceEEEEEeeeccCCC
Q 013012 76 RLHVEVATVP----ED---VGTAGALRAIAHHLT---AKDVLVVSGDLVSDVPPGAVTAAHRRHDAVVTAMICSVPVSGL 145 (451)
Q Consensus 76 ~~~~~i~~~~----~~---~gt~~~l~~~~~~l~---~~~~lvl~~D~i~~~~~~~~l~~~~~~~~~~t~~~~~~~~~~~ 145 (451)
...+.++... +. .||+++++.+++.+. .++|++++||.+++.++.++++.|+++++++|+++.+.+..
T Consensus 89 ~~~v~i~~~~~~~~~~~~~~Gt~~al~~a~~~l~~~~~~~~lv~~~D~~~~~~l~~l~~~~~~~~~~~tl~~~~~~~~-- 166 (420)
T 3brk_X 89 NESFDILPASQRVSETQWYEGTADAVYQNIDIIEPYAPEYMVILAGDHIYKMDYEYMLQQHVDSGADVTIGCLEVPRM-- 166 (420)
T ss_dssp TCEEEEECCC-------CCCCHHHHHHTTHHHHHHHCCSEEEEEESSCEECBCTHHHHHHHHHTTCSEEEEEEEEETT--
T ss_pred cCCEEEeCccccccCCccccCCHHHHHHHHHHHHhcCCCEEEEecccEEEchHHHHHHHHHHHcCCeEEEEEeecCcc--
Confidence 1124443211 23 799999999887764 36799999999889999999999998888888887765321
Q ss_pred ccCCCCCCcccCCCCCcccEEEecCCCceEEEeeccccccccccccHHHHhhcCeeEEecCCccceEEeechHHHHHHHh
Q 013012 146 SEAGSSGAKDKTKKPGRYNIIGMDPTKQFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAHMYAFNRSVLQEVLD 225 (451)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~v~~d~~~~~l~~~~~~~~~ek~~~i~~~~~~~~~~~~~~s~l~~~giYi~~~~~l~~~~~ 225 (451)
.+..|+++.+|+++++ ..+.+ |+...... .. ...++++++|+|+|++++|..+++
T Consensus 167 -------------~~~~~g~v~~d~~g~v-~~~~e-----kp~~~~~~--~~----~~~~~~~~~Giy~~~~~~l~~~l~ 221 (420)
T 3brk_X 167 -------------EATGFGVMHVNEKDEI-IDFIE-----KPADPPGI--PG----NEGFALASMGIYVFHTKFLMEAVR 221 (420)
T ss_dssp -------------GGGGSEEEEECTTSBE-EEEEE-----SCSSCCCB--TT----BTTEEEEEEEEEEEEHHHHHHHHT
T ss_pred -------------ccCcccEEEECCCCcE-EEeEe-----CCCccccc--cc----cccceEEeeeeEEEeHHHHHHHHH
Confidence 1457899988887764 44443 32100000 00 012468999999999999866654
Q ss_pred cCc----cccccccchhhHHHHhccccccccCCCCCCccccccCCCcchhhhhccCCCCCccccccCCCCCCCCCCCcce
Q 013012 226 QKD----KFQSLKQDVLPYLVRSQLKSEILINGAPQGQQAKENGNDKVSYRILANASTPSFHELYALGPNGSAPVRRTHK 301 (451)
Q Consensus 226 ~~~----~~~s~~~d~lp~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (451)
... ...++..|+++.+++++ +
T Consensus 222 ~~~~~~~~~~~~~~d~l~~li~~g-------------------------------------------------------~ 246 (420)
T 3brk_X 222 RDAADPTSSRDFGKDIIPYIVEHG-------------------------------------------------------K 246 (420)
T ss_dssp SSCCC----------CTTHHHHHS-------------------------------------------------------C
T ss_pred HhcccCCccccchHHHHHHHhhhC-------------------------------------------------------c
Confidence 421 12245567888777653 1
Q ss_pred eEEEEe---------ccchhhhhccCHHHHHHHchhccccccccCC---ccccCCCceeCCCCeeCC-----CcEECCCC
Q 013012 302 CCVYIA---------SNSKYCVRLNSIQAFMDINRDVIGEANHLSG---YNFSAQNNIIHPSAELGS-----KTTVGPHC 364 (451)
Q Consensus 302 ~~~~~~---------~~~~~~~~i~~~~~y~~~~~~~l~~~~~~~~---~~~~~~~~~i~~~~~i~~-----~~~i~~~~ 364 (451)
+++|.. +..++|.+++++++|+++++.++.......- ...+.....+++++.+++ ++.+ .++
T Consensus 247 v~~~~~~~~~~~~~~~~~~~~~dI~t~~d~~~a~~~ll~~~~~~~~~~~~~~i~~~~~i~~~~~i~~~~~~~~~~i-~~~ 325 (420)
T 3brk_X 247 AVAHRFADSCVRSDFEHEPYWRDVGTIDAYWQANIDLTDVVPDLDIYDKSWPIWTYAEITPPAKFVHDDEDRRGSA-VSS 325 (420)
T ss_dssp EEEEEHHHHBCCCTTCSSCCEECCCSHHHHHHHHHHTTSSSCSSCTTCCSSCCCCCCCCCCCCEEECBCSSCBCEE-ESC
T ss_pred EEEEEeccccccccccCCCEEEECCCHHHHHHHHHHHhCCCchhhcCCCCCceeeccccCCCcEEecccccCCcEe-cCC
Confidence 222222 1256999999999999999998765432211 011223445566666655 5555 589
Q ss_pred EECCCCEECCCCEEeceEECCCCEECCCcEEeceEECCCCEECCCcEEeCeEECCCCEECCCcEEcc
Q 013012 365 MLGEGSQMGDKCSVKRSVIGRHCRIGSNVKVVNSVVMNHVTIGDGCSIQGSVICSNAQLQERVALKD 431 (451)
Q Consensus 365 ~i~~~~~i~~~~~i~~svig~~~~ig~~~~i~~s~i~~~~~Ig~~~~i~~~ii~~~~~i~~~~~i~~ 431 (451)
.||++|.| +++.|.+|+||++|.||++|.|.+|+|++++.||++|.|.+|+||+++.|+++++|.+
T Consensus 326 ~ig~~~~I-~~~~i~~~~ig~~~~I~~~~~i~~~~i~~~~~i~~~~~i~~~~ig~~~~i~~~~~i~~ 391 (420)
T 3brk_X 326 VVSGDCII-SGAALNRSLLFTGVRANSYSRLENAVVLPSVKIGRHAQLSNVVIDHGVVIPEGLIVGE 391 (420)
T ss_dssp EECSSCEE-ESCEEESCEECTTCEECTTCEEEEEEECTTCEECTTCEEEEEEECTTCEECTTCEESS
T ss_pred EECCCCEE-cCCEEeCcEEcCCCEECCCCEEcceEEcCCCEECCCCEEeceEECCCCEECCCCEEeC
Confidence 99999999 8899999999999999999999999999999999999999999999999999999974
No 3
>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A*
Probab=100.00 E-value=1.1e-41 Score=348.31 Aligned_cols=363 Identities=20% Similarity=0.210 Sum_probs=248.2
Q ss_pred ceEEEEecCCCCCCCCCCCCCCcccccccCCcchHHHHHHHHHHCCCcEEEEEecCchhhHHHHHhhhhhcc-CceeeEE
Q 013012 3 FQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYV-DRLHVEV 81 (451)
Q Consensus 3 ~~avIlAgG~g~Rl~pl~~~~~pK~llpv~gkpli~~~l~~l~~~gi~~iivv~~~~~~~~~i~~~~~~~~~-~~~~~~i 81 (451)
+.+||||||+||||+|+ .||+|+||+|||||+|+|++|.++|+++++|++++. .+++++++.+... ....+.+
T Consensus 13 ~~vvILAaG~GtRm~~~----~pK~l~pv~gkp~i~~~l~~~~~~g~~~i~vv~~~~--~~~i~~~~~~~~~~~~~~i~~ 86 (501)
T 3st8_A 13 TAVLVLAAGPGTRMRSD----TPKVLHTLAGRSMLSHVLHAIAKLAPQRLIVVLGHD--HQRIAPLVGELADTLGRTIDV 86 (501)
T ss_dssp EEEEEEECSCCGGGCCS----SCGGGCEETTEEHHHHHHHHHHHHCCSEEEEEECTT--HHHHHHHHHHHHHHHTSCCEE
T ss_pred ceEEEECCcCcccCCCC----CCHHHeEECChhHHHHHHHHHHhCCCCEEEEEeCCC--HHHHHHHHHHHHHhcCCcEEE
Confidence 57899999999999988 399999999999999999999999999999999865 4577787764211 1235788
Q ss_pred EEcCCCCChHHHHHHHHhcCCC---CcEEEEcCC--ccCCCCchHHHHHHHhcCceEEEEEeeeccCCCccCCCCCCccc
Q 013012 82 ATVPEDVGTAGALRAIAHHLTA---KDVLVVSGD--LVSDVPPGAVTAAHRRHDAVVTAMICSVPVSGLSEAGSSGAKDK 156 (451)
Q Consensus 82 ~~~~~~~gt~~~l~~~~~~l~~---~~~lvl~~D--~i~~~~~~~~l~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~ 156 (451)
+.+++++||++|++++++++.+ ++++++.|| ++...++..++++|++.++++++++..++
T Consensus 87 ~~q~~~lGTa~Av~~a~~~l~~~~~~~~lvl~gd~~l~~~~~~~~l~~~h~~~~~~~ti~~~~~~--------------- 151 (501)
T 3st8_A 87 ALQDRPLGTGHAVLCGLSALPDDYAGNVVVTSGDTPLLDADTLADLIATHRAVSAAVTVLTTTLD--------------- 151 (501)
T ss_dssp EECSSCCCHHHHHHHHHTTSCTTCCSEEEEEETTCTTCCHHHHHHHHHHHHHTTCSEEEEEEECS---------------
T ss_pred EEcCCCCCcHHHHHHHHHHhccccccceeeecCcceeecHHHHHHHHHHHhhccccceEeeeccC---------------
Confidence 8899999999999999998863 358999999 45556789999999999999999988653
Q ss_pred CCCCCcccEEEecCCCceEEEeeccccccccccccHHHHhhcCeeEEecCCccceEEeechHHHHHHHhcCccc----cc
Q 013012 157 TKKPGRYNIIGMDPTKQFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAHMYAFNRSVLQEVLDQKDKF----QS 232 (451)
Q Consensus 157 ~~~~~~~~~v~~d~~~~~l~~~~~~~~~ek~~~i~~~~~~~~~~~~~~s~l~~~giYi~~~~~l~~~~~~~~~~----~s 232 (451)
+|.+||++..|+++++. .+.| |+..-+. +...+++|+|+|+|++++|..+++..... +-
T Consensus 152 --dp~~yG~i~~~~~g~v~-~ivE-----k~~~~~~---------~~~i~~in~Giy~f~~~~l~~~l~~l~~~n~~~e~ 214 (501)
T 3st8_A 152 --DPFGYGRILRTQDHEVM-AIVE-----QTDATPS---------QREIREVNAGVYAFDIAALRSALSRLSSNNAQQEL 214 (501)
T ss_dssp --CCTTSCEEEECTTCCEE-EEEC-----GGGCCHH---------HHHCCEEEEEEEEEEHHHHHHHHTTCCCCSTTCSC
T ss_pred --CchhccccccccceeEE-eecc-----ccCCChh---------hccceeeeceeeeecchhHHHhhhhhccccccccc
Confidence 37789999999998754 4443 2211111 12357899999999999998887653221 12
Q ss_pred cccchhhHHHHhccccccccCCCCCCccccccCCCcchhhhhccCCCCCccccccCCCCCCCCCCCcceeEEEEeccchh
Q 013012 233 LKQDVLPYLVRSQLKSEILINGAPQGQQAKENGNDKVSYRILANASTPSFHELYALGPNGSAPVRRTHKCCVYIASNSKY 312 (451)
Q Consensus 233 ~~~d~lp~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (451)
...|+++.+...+.......... ..+.. ..+ ....
T Consensus 215 yltd~i~~~~~~g~~v~~~~~~~-----~~~~~--g~n--------------------------------------~~~~ 249 (501)
T 3st8_A 215 YLTDVIAILRSDGQTVHASHVDD-----SALVA--GVN--------------------------------------NRVQ 249 (501)
T ss_dssp CTTHHHHHHHHTTCCEEEEECSS-----GGGGC--CCS--------------------------------------SHHH
T ss_pred chhhHHHHHHhcCceEEEEeccc-----hhhhc--ccc--------------------------------------cHHH
Confidence 23456655555443221111000 00000 000 0000
Q ss_pred hhhccC------HHHHHHHchhccc-------------ccccc------CCccccCC-----------------------
Q 013012 313 CVRLNS------IQAFMDINRDVIG-------------EANHL------SGYNFSAQ----------------------- 344 (451)
Q Consensus 313 ~~~i~~------~~~y~~~~~~~l~-------------~~~~~------~~~~~~~~----------------------- 344 (451)
+..... .+.++.....++. ....+ .+...+..
T Consensus 250 l~~~~~~~~~r~~~~~~~~gv~~~dp~~~~i~~dv~IG~dv~I~~~v~i~g~~~Ig~~~~I~~~~~i~~~~i~~~~~i~~ 329 (501)
T 3st8_A 250 LAELASELNRRVVAAHQLAGVTVVDPATTWIDVDVTIGRDTVIHPGTQLLGRTQIGGRCVVGPDTTLTDVAVGDGASVVR 329 (501)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEESCGGGEEECTTCEECTTCEECSSEEEETTCEECTTCEECSSCEEEEEEECTTCEECS
T ss_pred HHHHHHHhhhhhhhhhcccCceeeeeccccccCceEECCcceecceeeecCccccccceEEeeceeecCceEecCCEEEe
Confidence 000000 0000100000000 00000 00000111
Q ss_pred ----CceeCCCCeeCCCcEECCCCEECCCCEECCCCEEeceEECCCCEECCCcEEeceEECCCCEECCCcEEe-------
Q 013012 345 ----NNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVKRSVIGRHCRIGSNVKVVNSVVMNHVTIGDGCSIQ------- 413 (451)
Q Consensus 345 ----~~~i~~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~~svig~~~~ig~~~~i~~s~i~~~~~Ig~~~~i~------- 413 (451)
...++.++.+++.+.+++++.|+++|.||.++.+++|+||++|.|++.++|++|+|+++|.||++|.+.
T Consensus 330 ~~i~~~~ig~~~~ig~~~~i~~~~~i~~~v~IG~~v~ik~s~Ig~gskI~~~~~i~d~~Ig~~v~IG~g~i~~n~dg~~~ 409 (501)
T 3st8_A 330 THGSSSSIGDGAAVGPFTYLRPGTALGADGKLGAFVEVKNSTIGTGTKVPHLTYVGDADIGEYSNIGASSVFVNYDGTSK 409 (501)
T ss_dssp EEEEEEEECTTCEECSSEEECTTCEECTTCEEEETEEEESCEECTTCEEEESCEEESEEECSSCEECTTCEEECBCSSSB
T ss_pred ecccccccccccccCCceeecCCcEEccccccCCeEEEccceecCCcEEeccceecCceEcCCCEECCCEEEEcccCCcc
Confidence 112344455566667777788888888888888899999999999999999999999999999999885
Q ss_pred -CeEECCCCEECCCcEEc-ceEECCCCEECCCCccCC
Q 013012 414 -GSVICSNAQLQERVALK-DCQVLSLSTSVFLSLSSN 448 (451)
Q Consensus 414 -~~ii~~~~~i~~~~~i~-~~~ig~~~~i~~~~~~~~ 448 (451)
+++||++|.||.++.|. ++.||+|+.|++||-...
T Consensus 410 ~~t~IGd~~~iG~~~~l~~~v~Ig~~~~i~ags~v~~ 446 (501)
T 3st8_A 410 RRTTVGSHVRTGSDTMFVAPVTIGDGAYTGAGTVVRE 446 (501)
T ss_dssp CCEEECTTCEECTTCEEESSEEECTTCEECTTCEECS
T ss_pred cCCEECCCcEECCCCEEcCCcEECCCCEECCCCEECc
Confidence 38999999999999987 599999999998885443
No 4
>2ggo_A 401AA long hypothetical glucose-1-phosphate thymidylyltransferase; beta barrel; 1.80A {Sulfolobus tokodaii} PDB: 2ggq_A*
Probab=100.00 E-value=6.7e-40 Score=326.45 Aligned_cols=334 Identities=20% Similarity=0.334 Sum_probs=225.0
Q ss_pred ceEEEEecCCCCCCCCCCCCCCcccccccCCcchHHHHHHHHHHCCCcEEEEEecCchhhHHHHHhhhhhccCceeeEEE
Q 013012 3 FQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVEVA 82 (451)
Q Consensus 3 ~~avIlAgG~g~Rl~pl~~~~~pK~llpv~gkpli~~~l~~l~~~gi~~iivv~~~~~~~~~i~~~~~~~~~~~~~~~i~ 82 (451)
|+|||||||.|+||+|+ |.+.||+|+|++|+|||+|++++|.++++++++|+++++ +.+++.+... ++.++
T Consensus 1 m~aiIlA~G~g~R~~pl-t~~~~K~ll~i~g~pli~~~l~~l~~~~~~~i~vv~~~~-----i~~~~~~~~~---~i~~~ 71 (401)
T 2ggo_A 1 MKAFILAAGSGERLEPI-THTRPKAFVPILSKPLIEYQIEYLRKCGIRDITVIVSSK-----NKEYFEKKLK---EISIV 71 (401)
T ss_dssp CEEEEECCCCCGGGTTG-GGTSCGGGCEETTEEHHHHHHHHHHHTTCCEEEEEECGG-----GHHHHHHHCT---TCEEE
T ss_pred CeEEEEcCcCccccCcc-cCCCCcceeeECCEeHHHHHHHHHHHCCCCEEEEEeCHH-----HHHHhhccCC---cEEEE
Confidence 57999999999999999 889999999999999999999999999999999999743 3444433211 35666
Q ss_pred EcCC-CCChHHHHHHHHhcCCCCcEEEEcCCccCC--CCchHHHHHHHhcCceEEEEEeeeccCCCccCCCCCCcccCCC
Q 013012 83 TVPE-DVGTAGALRAIAHHLTAKDVLVVSGDLVSD--VPPGAVTAAHRRHDAVVTAMICSVPVSGLSEAGSSGAKDKTKK 159 (451)
Q Consensus 83 ~~~~-~~gt~~~l~~~~~~l~~~~~lvl~~D~i~~--~~~~~~l~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (451)
..++ ..|++++++.+.+ .+++++++||..+. .+++.+++ .+++++++.+.+ .
T Consensus 72 ~~~~~~~g~~~~l~~~~~---~~~~lv~~~D~~~~~~~~~~~l~~-----~~~~~i~~~~~~-----------------~ 126 (401)
T 2ggo_A 72 TQKDDIKGTGAAILSAKF---NDEALIIYGDLFFSNEKEICNIIT-----LKENAIIGVKVS-----------------N 126 (401)
T ss_dssp ECCTTCCBSTTTGGGCCC---SSEEEEEETTEEESCSHHHHHHTT-----CSSEEEEEEECS-----------------C
T ss_pred eCCCCCCChHHHHHHhcc---CCCEEEEeCccccccHHHHHHHHH-----hcCCEEEEEEcC-----------------C
Confidence 6666 6899988877765 46899999996544 55666654 345566655432 1
Q ss_pred CCcccEEEecCCCceEEEeeccccccccccccHHHHhhcCeeEEecCCccceEEeechHHHHHHHhcCc----ccccccc
Q 013012 160 PGRYNIIGMDPTKQFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAHMYAFNRSVLQEVLDQKD----KFQSLKQ 235 (451)
Q Consensus 160 ~~~~~~v~~d~~~~~l~~~~~~~~~ek~~~i~~~~~~~~~~~~~~s~l~~~giYi~~~~~l~~~~~~~~----~~~s~~~ 235 (451)
+..|+++..|+++++. .+. +|+. ...++++++|+|+|++++|+.+ +... ...++ +
T Consensus 127 ~~~~~~v~~~~~g~v~-~~~-----ek~~-------------~~~~~~~~~Giy~~~~~~~~~l-~~~~~~~~~~~~~-~ 185 (401)
T 2ggo_A 127 PKDYGVLVLDNQNNLS-KII-----EKPE-------------IPPSNLINAGIYKLNSDIFTYL-DKISISERGELEL-T 185 (401)
T ss_dssp CSSSCEEEECTTSSEE-EEE-----CSCS-------------SCSCSEEEEEEEEEETHHHHHH-HHSCCCSSSCBCH-H
T ss_pred CcceeEEEECCCCeEE-EEE-----ECCC-------------CCCCcEEEEEEEEEcHHHHHHh-hhcCcCCCCceEH-H
Confidence 3457888888777643 443 2321 1135789999999999998755 3211 01111 2
Q ss_pred chhhHHHHhccccccccCCCCCCccccccCCCcchhhhhccCCCCCccccccCCCCCCCCCCCcceeEEEEeccchhhhh
Q 013012 236 DVLPYLVRSQLKSEILINGAPQGQQAKENGNDKVSYRILANASTPSFHELYALGPNGSAPVRRTHKCCVYIASNSKYCVR 315 (451)
Q Consensus 236 d~lp~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (451)
|+++.+ ..+ .++..+. ..++|.+
T Consensus 186 ~~~~~~-~~g------------------------------------------------------~~v~~~~--~~~~~~d 208 (401)
T 2ggo_A 186 DAINLM-AKD------------------------------------------------------HRVKVIE--YEGYWMD 208 (401)
T ss_dssp HHHHHH-HHH------------------------------------------------------SCEEEEE--CCSCEEE
T ss_pred HHHHHH-HCC------------------------------------------------------CcEEEEE--ecceEEc
Confidence 455544 321 1223332 3458999
Q ss_pred ccCHHHHHHHchhcccccc------------ccCCccc------------cCCCceeCCCCeeCCCcEECCCCEECCCCE
Q 013012 316 LNSIQAFMDINRDVIGEAN------------HLSGYNF------------SAQNNIIHPSAELGSKTTVGPHCMLGEGSQ 371 (451)
Q Consensus 316 i~~~~~y~~~~~~~l~~~~------------~~~~~~~------------~~~~~~i~~~~~i~~~~~i~~~~~i~~~~~ 371 (451)
++++++|..+++.++.... .+.+... +.+++.|++++.|++++.|++++.||++|.
T Consensus 209 I~t~edl~~a~~~l~~~~~~~~~~~~i~~~~~i~~~~~ig~~~~I~~~~~i~~~~~Ig~~~~I~~~~~i~~~~~Ig~~~~ 288 (401)
T 2ggo_A 209 IGKPWNIIDVNKWALDNLVFSQNLGNVEDNVKIKGKVIIEEDAEIKSGTYIEGPVYIGKGSEIGPNSYLRPYTILVEKNK 288 (401)
T ss_dssp CCSHHHHHHHHHHHHHHTCCCEECSEECSSCEEESCEEECTTCEECTTCEEESSEEECTTCEECSSCEECTTEEECSSCE
T ss_pred CCCHHHHHHHHHHHHHhcccccccceeCCCCEEcCCeEEcCCCEECCCCEEeCCeEECCCCEECCCCEEcCCcEECCCCE
Confidence 9999999999887654321 1111111 112223344444444444445555566666
Q ss_pred ECCCCEEeceEECCCCEECCCcEEeceEECCCCEECCCcEEe-------------------------CeEECCCCEECCC
Q 013012 372 MGDKCSVKRSVIGRHCRIGSNVKVVNSVVMNHVTIGDGCSIQ-------------------------GSVICSNAQLQER 426 (451)
Q Consensus 372 i~~~~~i~~svig~~~~ig~~~~i~~s~i~~~~~Ig~~~~i~-------------------------~~ii~~~~~i~~~ 426 (451)
|+++|.|++++||+++.|++++.|.+++|++++.||.++.|. +++||++++||.+
T Consensus 289 ig~~~~i~~~~i~~~~~i~~~~~i~~~~Ig~~~~Ig~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~v~Ig~~~~Ig~~ 368 (401)
T 2ggo_A 289 IGASVEVKESVIMEGSKIPHLSYVGDSVIAEDVNFGAGTLIANLRFDEKEVKVNVKGKRISSGRRKLGAFIGGHVRTGIN 368 (401)
T ss_dssp EEETCEEESEEECTTCEEEESCEEESCEECTTCEECTTCEECCSCTTCSCCEEEETTEEEECSCSSCCCEECTTCEECTT
T ss_pred ECCCCEEecCEEcCCcEECCCceEcceEECCCcEECCCcEEcCcccCCCceeEEECCceEEecccccCcEECCCeEECCC
Confidence 666666666777777777777777778888888888888876 6788888888888
Q ss_pred cEEc-ceEECCCCEECCCCccCC
Q 013012 427 VALK-DCQVLSLSTSVFLSLSSN 448 (451)
Q Consensus 427 ~~i~-~~~ig~~~~i~~~~~~~~ 448 (451)
++|. ++.||++++|++++....
T Consensus 369 ~~I~~gv~Ig~~~vi~~gsvv~~ 391 (401)
T 2ggo_A 369 VTILPGVKIGAYARIYPGAVVNR 391 (401)
T ss_dssp CEECTTCEECTTCEECTTCEECS
T ss_pred cEEcCCcEECCCcEECCCCeEcc
Confidence 8887 588888888888875443
No 5
>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A*
Probab=100.00 E-value=7.8e-39 Score=324.39 Aligned_cols=180 Identities=18% Similarity=0.285 Sum_probs=132.4
Q ss_pred CCceEEEEecCCCCCCCCCCCCCCcccccccCCcchHHHHHHHHHHCCCcEEEEEecCchhhHHHHHhhhhhccCceeeE
Q 013012 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVE 80 (451)
Q Consensus 1 m~~~avIlAgG~g~Rl~pl~~~~~pK~llpv~gkpli~~~l~~l~~~gi~~iivv~~~~~~~~~i~~~~~~~~~~~~~~~ 80 (451)
|++.|||||||.|+||. ...||+|+|++|+|||+|++++|.++++++++|++++. .+.+.+++.+ .++.
T Consensus 7 ~~~~aiIlA~G~g~Rl~----~~~pK~l~~i~g~pli~~~l~~l~~~~~~~i~vv~~~~--~~~i~~~~~~-----~~~~ 75 (459)
T 4fce_A 7 SSMSVVILAAGKGTRMY----SDLPKVLHPLAGKPMVQHVIDAAMKLGAQHVHLVYGHG--GELLKKTLAD-----PSLN 75 (459)
T ss_dssp CCEEEEEEECCCCGGGC----CSSCGGGSEETTEEHHHHHHHHHHHHTCSCEEEEESSC--HHHHHHHC----------C
T ss_pred CcceEEEECCCCCccCC----CCCCcccCeeCCeeHHHHHHHHHHhCCCCcEEEEeCCC--HHHHHHHhcc-----CCcE
Confidence 57899999999999994 46899999999999999999999999999999999865 3466665543 2356
Q ss_pred EEEcCCCCChHHHHHHHHhcCCC-CcEEEEcCCc--cCCCCchHHHHHHHhcCceEEEEEeeeccCCCccCCCCCCcccC
Q 013012 81 VATVPEDVGTAGALRAIAHHLTA-KDVLVVSGDL--VSDVPPGAVTAAHRRHDAVVTAMICSVPVSGLSEAGSSGAKDKT 157 (451)
Q Consensus 81 i~~~~~~~gt~~~l~~~~~~l~~-~~~lvl~~D~--i~~~~~~~~l~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~ 157 (451)
++..+...|++++++.+++.+.+ +++++++||. +.+.+++.+++.|++ .+++++..+..
T Consensus 76 ~v~~~~~~g~~~~i~~~~~~~~~~~~~lv~~~D~P~i~~~~i~~l~~~~~~--~~~~~~~~~~~---------------- 137 (459)
T 4fce_A 76 WVLQAEQLGTGHAMQQAAPHFADDEDILMLYGDVPLISVDTLQRLLAAKPE--GGIGLLTVKLD---------------- 137 (459)
T ss_dssp EEECSSCCCHHHHHHHHGGGSCTTSEEEEEETTCTTCCHHHHHHHHHHCCT--TSEEEEEEECS----------------
T ss_pred EEeCCCCCCcHHHHHHHHHhcCCCCcEEEEeCCcccCCHHHHHHHHHHHhh--CCEEEEEEecC----------------
Confidence 66667779999999999998863 6799999994 777889999998875 34555544321
Q ss_pred CCCCcccEEEecCCCceEEEeeccccccccccccHHHHhhcCeeEEecCCccceEEeechHHHHHHHhc
Q 013012 158 KKPGRYNIIGMDPTKQFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAHMYAFNRSVLQEVLDQ 226 (451)
Q Consensus 158 ~~~~~~~~v~~d~~~~~l~~~~~~~~~ek~~~i~~~~~~~~~~~~~~s~l~~~giYi~~~~~l~~~~~~ 226 (451)
++..|+++..| +++ +..+.+ |+...+. ...++++++|+|+|+++.|..+++.
T Consensus 138 -~~~~~g~v~~~-~g~-v~~~~e-----k~~~~~~---------~~~~~~~~~Giy~~~~~~l~~~l~~ 189 (459)
T 4fce_A 138 -NPSGYGRIVRE-NGD-VVGIVE-----HKDASDA---------QREINEINTGILVANGRDLKRWLSL 189 (459)
T ss_dssp -CCTTSCEEEEE-TTE-EEEEEC-----GGGCCTT---------GGGCCEEEEEEEEEEHHHHHHHHHT
T ss_pred -CCCcccEEEeC-CCc-EEEEEE-----CCCCChH---------HhhccEEEEEEEEEEHHHHHHHHHH
Confidence 24567888877 454 445543 2110000 1124688999999999988666554
No 6
>1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A*
Probab=100.00 E-value=9.8e-39 Score=324.42 Aligned_cols=342 Identities=19% Similarity=0.242 Sum_probs=238.7
Q ss_pred ceEEEEecCCCCCCCCCCCCCCcccccccCCcchHHHHHHHHHHCCCcEEEEEecCchhhHHHHHhhhhhccCceeeEEE
Q 013012 3 FQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVEVA 82 (451)
Q Consensus 3 ~~avIlAgG~g~Rl~pl~~~~~pK~llpv~gkpli~~~l~~l~~~gi~~iivv~~~~~~~~~i~~~~~~~~~~~~~~~i~ 82 (451)
-+|||||||.|+||+ ...||+|+|++|+|||+|++++|.++++++++|++++. .+.+.+++.+ ++.++
T Consensus 12 ~~~vIlAaG~g~R~~----~~~pK~l~~i~gkpli~~~l~~l~~~g~~~iivv~~~~--~~~i~~~~~~------~i~~v 79 (468)
T 1hm9_A 12 NFAIILAAGKGTRMK----SDLPKVLHKVAGISMLEHVFRSVGAIQPEKTVTVVGHK--AELVEEVLAG------QTEFV 79 (468)
T ss_dssp EEEEEECCCCCGGGC----CSSCGGGSEETTEEHHHHHHHHHHTTCCSEEEEEECTT--HHHHHHSSSS------SSEEE
T ss_pred CcEEEEcCCCCccCC----CCCCcEeeEECCccHHHHHHHHHHhcCCCCEEEEECCC--HHHHHHHhCC------CcEEE
Confidence 379999999999994 46899999999999999999999999999999999854 3355554432 35666
Q ss_pred EcCCCCChHHHHHHHHhcCC--CCcEEEEcCCc--cCCCCchHHHHHHHhcCceEEEEEeeeccCCCccCCCCCCcccCC
Q 013012 83 TVPEDVGTAGALRAIAHHLT--AKDVLVVSGDL--VSDVPPGAVTAAHRRHDAVVTAMICSVPVSGLSEAGSSGAKDKTK 158 (451)
Q Consensus 83 ~~~~~~gt~~~l~~~~~~l~--~~~~lvl~~D~--i~~~~~~~~l~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~ 158 (451)
..+...|++++++.+++.+. .+++++++||. +.+.+++.+++.|++.++++++++.+..
T Consensus 80 ~~~~~~G~~~sl~~a~~~~~~~~~~vlv~~~D~P~i~~~~i~~l~~~~~~~~~~~~i~~~~~~----------------- 142 (468)
T 1hm9_A 80 TQSEQLGTGHAVMMTEPILEGLSGHTLVIAGDTPLITGESLKNLIDFHINHKNVATILTAETD----------------- 142 (468)
T ss_dssp ECSSCCCHHHHHHTTHHHHTTCCSEEEEEETTCTTCCHHHHHHHHHHHHHTTCSEEEEEEECS-----------------
T ss_pred eCCccCChHHHHHHHHHHhccCCCeEEEEeCCccccCHHHHHHHHHHHHhcCCcEEEEEeccC-----------------
Confidence 66677899999999988775 46799999995 7778999999999988888887766532
Q ss_pred CCCcccEEEecCCCceEEEeeccccccccccccHHHHhhcCeeEEecCCccceEEeechHHHHHHHhcCccc----cccc
Q 013012 159 KPGRYNIIGMDPTKQFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAHMYAFNRSVLQEVLDQKDKF----QSLK 234 (451)
Q Consensus 159 ~~~~~~~v~~d~~~~~l~~~~~~~~~ek~~~i~~~~~~~~~~~~~~s~l~~~giYi~~~~~l~~~~~~~~~~----~s~~ 234 (451)
.+..|+++..|+++++. .+.+ |+..-+ ....++++++|+|+|+++.|..+++..... ....
T Consensus 143 ~~~~~g~v~~d~~g~v~-~~~e-----k~~~~~---------~~~~~~~~~~Giy~f~~~~l~~~l~~~~~~~~~~~~~~ 207 (468)
T 1hm9_A 143 NPFGYGRIVRNDNAEVL-RIVE-----QKDATD---------FEKQIKEINTGTYVFDNERLFEALKNINTNNAQGEYYI 207 (468)
T ss_dssp CCTTSCEEEECTTCCEE-EEEC-----TTTCCT---------TGGGCCEEEEEEEEEEHHHHHHHHTTCCSCSTTCSCCT
T ss_pred CCCceeEEEECCCCCEE-EEEE-----CCCCCh---------HHhcCeEEEEEEEEEEHHHHHHHHHhhccccCCCeEEH
Confidence 24568888888877644 4443 221000 001246889999999999765555432111 1122
Q ss_pred cchhhHHHHhccccccccCCCCCCccccccCCCcchhhhhccCCCCCccccccCCCCCCCCCCCcceeEEEEeccchhhh
Q 013012 235 QDVLPYLVRSQLKSEILINGAPQGQQAKENGNDKVSYRILANASTPSFHELYALGPNGSAPVRRTHKCCVYIASNSKYCV 314 (451)
Q Consensus 235 ~d~lp~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (451)
+|+++.+++.+ .+++.|. ..++|.
T Consensus 208 ~d~~~~l~~~g------------------------------------------------------~~v~~~~--~~g~~~ 231 (468)
T 1hm9_A 208 TDVIGIFRETG------------------------------------------------------EKVGAYT--LKDFDE 231 (468)
T ss_dssp THHHHHHHHHT------------------------------------------------------CCEEEEE--CSSGGG
T ss_pred HHHHHHHHHCC------------------------------------------------------CEEEEEE--cCChHH
Confidence 67777766543 1233443 245887
Q ss_pred h--ccCHHHHHHHchhccccc--------cc-cC-CccccCCCceeCCCCeeCCCcEECCCCEECCCCEECCCCEEeceE
Q 013012 315 R--LNSIQAFMDINRDVIGEA--------NH-LS-GYNFSAQNNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVKRSV 382 (451)
Q Consensus 315 ~--i~~~~~y~~~~~~~l~~~--------~~-~~-~~~~~~~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~~sv 382 (451)
+ ++++++|..++..+..+. .. +. ...++.+++.+++++.|++++.|++++.||++|.|+++|.|++++
T Consensus 232 ~i~i~t~~dl~~a~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~i~~~~~i~~~~~ig~~~~I~~~~~i~~~~ 311 (468)
T 1hm9_A 232 SLGVNDRVALATAESVMRRRINHKHMVNGVSFVNPEATYIDIDVEIAPEVQIEANVILKGQTKIGAETVLTNGTYVVDST 311 (468)
T ss_dssp GCCCCSHHHHHHHHHHHHHHHHHHHHHTTCEESCGGGCEECTTCEECTTCEECSSCEEESSCEECTTCEECTTCEEESCE
T ss_pred hhCCCCHHHHHHHHHHHHHHHHHHHHhcCCEEECCCeeEECCCcEECCCCEECCCcEECCCCEECCCCEECCCCEEeccE
Confidence 7 559999988876542211 00 11 122345566777777777777777788888888888888888888
Q ss_pred ECCCCEECCCcEEeceEECCCCEECCCcEEe-CeEECCCCEECCCcEE-----------------cceEECCCCEECCCC
Q 013012 383 IGRHCRIGSNVKVVNSVVMNHVTIGDGCSIQ-GSVICSNAQLQERVAL-----------------KDCQVLSLSTSVFLS 444 (451)
Q Consensus 383 ig~~~~ig~~~~i~~s~i~~~~~Ig~~~~i~-~~ii~~~~~i~~~~~i-----------------~~~~ig~~~~i~~~~ 444 (451)
||++|.|+ ++.|.+++|++++.||+++.|. +++||+++.|++++.+ +++.||+++.|++++
T Consensus 312 ig~~~~i~-~~~i~~~~Ig~~~~Ig~~~~i~~~~~ig~~~~Ig~~~~i~~~~Ig~~~~i~~~~~i~~~~Ig~~~~Ig~~~ 390 (468)
T 1hm9_A 312 IGAGAVIT-NSMIEESSVADGVTVGPYAHIRPNSSLGAQVHIGNFVEVKGSSIGENTKAGHLTYIGNCEVGSNVNFGAGT 390 (468)
T ss_dssp ECTTCEEC-SCEEESCEECTTCEECSSCEECSSCEECTTCEEEEEEEEESCEECTTCEEEEEEEEESEEECTTCEECTTC
T ss_pred EeCCcEEE-EEEEeccccCCCcEECCceEEecCcEECCccEECCCcEEeeeEEcCCcEeCCceEEccccccCCcEECCCc
Confidence 88888887 7777777777777777777776 6677766666654444 334566666666655
Q ss_pred c
Q 013012 445 L 445 (451)
Q Consensus 445 ~ 445 (451)
.
T Consensus 391 ~ 391 (468)
T 1hm9_A 391 I 391 (468)
T ss_dssp E
T ss_pred E
Confidence 3
No 7
>2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A*
Probab=100.00 E-value=7e-38 Score=317.13 Aligned_cols=304 Identities=14% Similarity=0.215 Sum_probs=190.3
Q ss_pred CCceEEEEecCCCCCCCCCCCCCCcccccccCCcchHHHHHHHHHHCCCcEEEEEecCchhhHHHHHhhhhhccCceeeE
Q 013012 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVE 80 (451)
Q Consensus 1 m~~~avIlAgG~g~Rl~pl~~~~~pK~llpv~gkpli~~~l~~l~~~gi~~iivv~~~~~~~~~i~~~~~~~~~~~~~~~ 80 (451)
|++.|||||||.|+||. ...||+|+|++|+|||+|++++|.++++++++|+++++ .+.+.+++.+. ++.
T Consensus 4 ~~~~aiIlA~G~g~Rl~----~~~pK~l~~i~gkpli~~~l~~l~~~~~~~iivv~~~~--~~~i~~~~~~~-----~~~ 72 (456)
T 2v0h_A 4 KALSAVILAAGKGTRMY----SDLPKVLHTIAGKPMVKHVIDTAHQLGSENIHLIYGHG--GDLMRTHLANE-----QVN 72 (456)
T ss_dssp CCEEEEEECCCCCGGGC----SSSCGGGSEETTEEHHHHHHHHHHHTTCSCEEEEECTT--HHHHHHHTTTC-----CCE
T ss_pred CcceEEEECCCCCcccC----CCCCccccEECCccHHHHHHHHHHhCCCCcEEEEeCCC--HHHHHHHhhcC-----CcE
Confidence 46789999999999994 46899999999999999999999999999999999854 24566655431 356
Q ss_pred EEEcCCCCChHHHHHHHHhcCC-CCcEEEEcCCc--cCCCCchHHHHHHHhcCceEEEEEeeeccCCCccCCCCCCcccC
Q 013012 81 VATVPEDVGTAGALRAIAHHLT-AKDVLVVSGDL--VSDVPPGAVTAAHRRHDAVVTAMICSVPVSGLSEAGSSGAKDKT 157 (451)
Q Consensus 81 i~~~~~~~gt~~~l~~~~~~l~-~~~~lvl~~D~--i~~~~~~~~l~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~ 157 (451)
++..++..|++++++.+++.+. .+++++++||. +.+.+++.+++.|++ ++++++..+..
T Consensus 73 ~v~~~~~~g~~~~~~~~~~~~~~~~~vlv~~~D~P~i~~~~i~~l~~~~~~--~~~~~~~~~~~---------------- 134 (456)
T 2v0h_A 73 WVLQTEQLGTAHAVQQAAPFFKDNENIVVLYGDAPLITKETLEKLIEAKPE--NGIALLTVNLD---------------- 134 (456)
T ss_dssp EEECSCCCCHHHHHHHHGGGCCTTSEEEEEETTCTTCCHHHHHHHHHHCCT--TSEEEEEEECS----------------
T ss_pred EEeCCCCCCcHHHHHHHHHhcCCCCeEEEEcCCcceeCHHHHHHHHHHHhc--CCEEEEEeecC----------------
Confidence 6666777899999999999885 46799999995 677789999998876 45666655432
Q ss_pred CCCCcccEEEecCCCceEEEeeccccccccccccHHHHhhcCeeEEecCCccceEEeechHHHHHHHhcCccc----ccc
Q 013012 158 KKPGRYNIIGMDPTKQFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAHMYAFNRSVLQEVLDQKDKF----QSL 233 (451)
Q Consensus 158 ~~~~~~~~v~~d~~~~~l~~~~~~~~~ek~~~i~~~~~~~~~~~~~~s~l~~~giYi~~~~~l~~~~~~~~~~----~s~ 233 (451)
.+..|+.+..| +++ +..+.+ |+. ..... ..++++++|+|+|+++.|..+++..... ...
T Consensus 135 -~~~~~g~v~~~-~g~-v~~~~e-----k~~-~~~~~--------~~~~~~~~Giy~~~~~~l~~~l~~~~~~~~~~~~~ 197 (456)
T 2v0h_A 135 -NPTGYGRIIRE-NGN-VVAIVE-----QKD-ANAEQ--------LNIKEVNTGVMVSDGASFKKWLARVGNNNAQGEYY 197 (456)
T ss_dssp -SCTTSCEEEEE-TTE-EEEEEC-----TTT-CCHHH--------HTCCEEEEEEEEEEHHHHHHHHTTCCCCSTTCCCC
T ss_pred -CCCccceEEEc-CCc-EEEEEE-----CCC-CChhH--------hcCcEEEEEEEEEEHHHHHHHHHHhccccccccEE
Confidence 14457877777 554 445543 211 11000 1246889999999999775555432111 111
Q ss_pred ccchhhHHHHhccccccccCCCCCCccccccCCCcchhhhhccCCCCCccccccCCCCCCCCCCCcceeEEEEeccchhh
Q 013012 234 KQDVLPYLVRSQLKSEILINGAPQGQQAKENGNDKVSYRILANASTPSFHELYALGPNGSAPVRRTHKCCVYIASNSKYC 313 (451)
Q Consensus 234 ~~d~lp~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (451)
.+|+++.+...+ .++..|..+....|
T Consensus 198 ~~d~~~~~~~~g------------------------------------------------------~~v~~~~~~~~~~~ 223 (456)
T 2v0h_A 198 LTDLIALANQDN------------------------------------------------------CQVVAVQATDVMEV 223 (456)
T ss_dssp GGGHHHHHHHTT------------------------------------------------------CCEEEEECSCTGGG
T ss_pred HHHHHHHHHHcC------------------------------------------------------CEEEEEEeCCcceE
Confidence 245666554432 12333432222345
Q ss_pred hhccCHHHHHHHchhcccc--------cccc-CC-ccccCCCceeCCCCeeCCCcEECCCCEECCCCEECCCCEEeceEE
Q 013012 314 VRLNSIQAFMDINRDVIGE--------ANHL-SG-YNFSAQNNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVKRSVI 383 (451)
Q Consensus 314 ~~i~~~~~y~~~~~~~l~~--------~~~~-~~-~~~~~~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~~svi 383 (451)
.+++++++|..+++.+... ...+ .+ ...+.+++.+++++.|++++.|++++.||++|.|+++|.|++++|
T Consensus 224 ~~I~tpeDl~~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~ig~~~~I~~~~~i~~~~~Ig~~~~I~~~~~i~~~~i 303 (456)
T 2v0h_A 224 EGANNRLQLAALERYFQNKQASKLLLEGVMIYDPARFDLRGTLEHGKDVEIDVNVIIEGNVKLGDRVKIGTGCVLKNVVI 303 (456)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHHHHHHTTCEESCGGGEEEEEEEEECSSCEECSSEEEEEEEEECTTCEECTTCEEEEEEE
T ss_pred EeCCCHHHHHHHHHHHHHHHHHHHHHcCCEEECCCccEEcCceEECCCCEEcCCcEEcCCcEECCCCEECCCCEEEeEEE
Confidence 6888999998887644221 1110 10 122333444555555555555555555555555555555555555
Q ss_pred CCCCEECCCcEEeceEECCCC
Q 013012 384 GRHCRIGSNVKVVNSVVMNHV 404 (451)
Q Consensus 384 g~~~~ig~~~~i~~s~i~~~~ 404 (451)
|++|.|+++|.|.+++|++++
T Consensus 304 g~~~~I~~~~~i~~~~ig~~~ 324 (456)
T 2v0h_A 304 GNDVEIKPYSVLEDSIVGEKA 324 (456)
T ss_dssp CTTCEECSSCEEEEEEECTTC
T ss_pred eCCCEEcCCeEEccCcCCCCc
Confidence 555554444444433333333
No 8
>3juk_A UDP-glucose pyrophosphorylase (GALU); transfer; HET: UPG; 2.30A {Helicobacter pylori} PDB: 3juj_A*
Probab=99.97 E-value=1.4e-30 Score=246.40 Aligned_cols=239 Identities=14% Similarity=0.226 Sum_probs=176.3
Q ss_pred CCceEEEEecCCCCCCCCCCCCCCcccccccCCcchHHHHHHHHHHCCCcEEEEEecCchhhHHHHHhhhhhcc------
Q 013012 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYV------ 74 (451)
Q Consensus 1 m~~~avIlAgG~g~Rl~pl~~~~~pK~llpv~gkpli~~~l~~l~~~gi~~iivv~~~~~~~~~i~~~~~~~~~------ 74 (451)
|.++|||||||.|+||+|+ |...||+|+|++|+|||+|+++++.++|+++++|++++. .+.+.+++.+.+.
T Consensus 1 M~~~avIlAaG~gtRl~pl-t~~~pK~ll~i~gkpli~~~l~~l~~~gi~~i~vv~~~~--~~~i~~~~~~~~~l~~~l~ 77 (281)
T 3juk_A 1 MIKKCLFPAAGYGTRFLPI-TKTIPKEMLPIVDKPLIQYAVEEAMEAGCEVMAIVTGRN--KRSLEDYFDTSYEIEHQIQ 77 (281)
T ss_dssp CCCEEEEECCSCCGGGTTG-GGTSCGGGCBSSSSBHHHHHHHHHHHHTCCEEEEEECTT--HHHHHHHTSCCC-------
T ss_pred CceEEEEECCcCCcccCcc-ccCCCcccceECCEEHHHHHHHHHHhCCCCEEEEEecCC--HHHHHHHHhcchhhhhhhh
Confidence 8899999999999999999 899999999999999999999999999999999999855 3467777654210
Q ss_pred ---------------CceeeEEEEcCCCCChHHHHHHHHhcCCCCcEEEEcCCccCCCC-----chHHHHHHHhcCceEE
Q 013012 75 ---------------DRLHVEVATVPEDVGTAGALRAIAHHLTAKDVLVVSGDLVSDVP-----PGAVTAAHRRHDAVVT 134 (451)
Q Consensus 75 ---------------~~~~~~i~~~~~~~gt~~~l~~~~~~l~~~~~lvl~~D~i~~~~-----~~~~l~~~~~~~~~~t 134 (451)
....+.++.++...||+++++.+++.+.+++|+|++||.+.+.+ +..+++.|++.++ .+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Gt~~al~~a~~~l~~~~~lv~~~D~~~~~~~~~~~l~~l~~~~~~~~~-~~ 156 (281)
T 3juk_A 78 GTNKENALKSIRNIIEKCCFSYVRQKQMKGLGHAILTGEALIGNEPFAVILADDLCISHDHPSVLKQMTSLYQKYQC-SI 156 (281)
T ss_dssp -CCHHHHHHHHHHHHHHCEEEEEECSSCCCHHHHHHHTHHHHCSSCEEEECTTEEEECTTSCCHHHHHHHHHHHHCS-CE
T ss_pred cccchhhhhhhhccccCccEEEEecCCCCCcHHHHHHHHHHcCCCCEEEEeCCeeccCccchHHHHHHHHHHHHcCC-CE
Confidence 01235556667789999999999998876789999999877777 9999999988777 55
Q ss_pred EEEeeeccCCCccCCCCCCcccCCCCCcccEEEecC--CC-ceEEEeeccccccccccccHHHHhhcCeeEEecCCccce
Q 013012 135 AMICSVPVSGLSEAGSSGAKDKTKKPGRYNIIGMDP--TK-QFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAH 211 (451)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~--~~-~~l~~~~~~~~~ek~~~i~~~~~~~~~~~~~~s~l~~~g 211 (451)
+++...+.. .+.+||++..|+ ++ ..+..+. ||+..- ...++++++|
T Consensus 157 v~~~~~~~~---------------~~~~~g~v~~~~~~~g~~~v~~~~-----Ekp~~~-----------~~~~~~~~~G 205 (281)
T 3juk_A 157 VAIEEVALE---------------EVSKYGVIRGEWLEEGVYEIKDMV-----EKPNQE-----------DAPSNLAVIG 205 (281)
T ss_dssp EEEEECCTT---------------TGGGSEEEEEEEEETTEEEEEEEE-----ESCCTT-----------TCSCSEEEEE
T ss_pred EEEEEechh---------------hcccCCEEEeccCCCCceEEeEEE-----ECcCCC-----------CCCcceeEEE
Confidence 555544321 256789998886 55 1344554 332100 1135788999
Q ss_pred EEeechHHHHHHHhcCc---cccccccchhhHHHHhccccccccCCCCCCccccccCCCcchhhhhccCCCCCccccccC
Q 013012 212 MYAFNRSVLQEVLDQKD---KFQSLKQDVLPYLVRSQLKSEILINGAPQGQQAKENGNDKVSYRILANASTPSFHELYAL 288 (451)
Q Consensus 212 iYi~~~~~l~~~~~~~~---~~~s~~~d~lp~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (451)
+|+|++++|+.+.+... ....+ .|+++.++.++
T Consensus 206 iYi~~~~~l~~l~~~~~~~~~e~~l-~d~i~~l~~~~------------------------------------------- 241 (281)
T 3juk_A 206 RYILTPDIFEILSETKPGKNNEIQI-TDALRTQAKRK------------------------------------------- 241 (281)
T ss_dssp EEEECTTHHHHHHTCCCCGGGSCCH-HHHHHHHHHHS-------------------------------------------
T ss_pred EEEECHHHHHHHHhcCCCCCCceeH-HHHHHHHHhcC-------------------------------------------
Confidence 99999999975533211 11122 56776666432
Q ss_pred CCCCCCCCCCcceeEEEEeccchhhhhccCHHHHHHHchhcccc
Q 013012 289 GPNGSAPVRRTHKCCVYIASNSKYCVRLNSIQAFMDINRDVIGE 332 (451)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~y~~~~~~~l~~ 332 (451)
++.+|. ..++|.+++++++|+++++.++..
T Consensus 242 ------------~v~~~~--~~g~~~dIgt~~d~~~a~~~l~~~ 271 (281)
T 3juk_A 242 ------------RIIAYQ--FKGKRYDCGSVEGYIEASNAYYKK 271 (281)
T ss_dssp ------------CCEEEE--CCSEEEETTSHHHHHHHHHHHHHH
T ss_pred ------------CEEEEE--eCCeEEcCCCHHHHHHHHHHHHhc
Confidence 233443 357999999999999999987653
No 9
>4ecm_A Glucose-1-phosphate thymidylyltransferase; HET: DAU; 2.30A {Bacillus anthracis} PDB: 3hl3_A*
Probab=99.96 E-value=2.1e-28 Score=229.81 Aligned_cols=234 Identities=16% Similarity=0.257 Sum_probs=172.5
Q ss_pred CceEEEEecCCCCCCCCCCCCCCcccccccCCcchHHHHHHHHHHCCCcEEEEEecCchhhHHHHHhhhhhccCceeeEE
Q 013012 2 DFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVEV 81 (451)
Q Consensus 2 ~~~avIlAgG~g~Rl~pl~~~~~pK~llpv~gkpli~~~l~~l~~~gi~~iivv~~~~~~~~~i~~~~~~~~~~~~~~~i 81 (451)
+|+|||||||.|+||+|+ |...||+|+|++|+|||+|+++++.++|+++|+|++++.. .+.+.+++.+.......+.+
T Consensus 24 ~m~aiIlAaG~g~Rl~~l-t~~~pK~ll~i~g~pli~~~l~~l~~~g~~~iivv~~~~~-~~~~~~~~~~~~~~~~~i~~ 101 (269)
T 4ecm_A 24 AMKGIILAGGTGSRLYPI-TKVTNKHLLPVGRYPMIYHAVYKLKQCDITDIMIITGKEH-MGDVVSFLGSGQEFGVSFTY 101 (269)
T ss_dssp CEEEEEECCSCCGGGTTT-TSSSCGGGSEETTEEHHHHHHHHHHHTTCCEEEEEECTTT-HHHHHHHHTTSGGGTCEEEE
T ss_pred CcEEEEECCCCccccccc-cCCCCceecEECCEEHHHHHHHHHHHCCCCEEEEECChhh-HHHHHHHHhhccccCceEEE
Confidence 479999999999999999 8899999999999999999999999999999999998432 23455665431111223555
Q ss_pred EEcCCCCChHHHHHHHHhcCCCCcEEEEcCCccCCCCchHHHHHHHhcCceEEEEEeeeccCCCccCCCCCCcccCCCCC
Q 013012 82 ATVPEDVGTAGALRAIAHHLTAKDVLVVSGDLVSDVPPGAVTAAHRRHDAVVTAMICSVPVSGLSEAGSSGAKDKTKKPG 161 (451)
Q Consensus 82 ~~~~~~~gt~~~l~~~~~~l~~~~~lvl~~D~i~~~~~~~~l~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (451)
..++...|++++++.+++.+.+++++|++||.++..++.++++.|++.++++++++.+.+ .+.
T Consensus 102 ~~~~~~~G~~~al~~a~~~~~~~~~lv~~~D~~~~~~l~~l~~~~~~~~~~~~~~~~~~~-----------------~~~ 164 (269)
T 4ecm_A 102 RVQDKAGGIAQALGLCEDFVGNDRMVVILGDNIFSDDIRPYVEEFTNQKEGAKVLLQSVD-----------------DPE 164 (269)
T ss_dssp EECSSCCCHHHHHHTTHHHHTTSEEEEEETTEEESSCSHHHHHHHHTSSSSEEEEEEECS-----------------CGG
T ss_pred eeCCccCcHHHHHHHHHHhcCCCcEEEEeCCccCccCHHHHHHHHHhcCCCeEEEEEECC-----------------CCC
Confidence 556677999999999988876678999999987789999999999988888888876543 245
Q ss_pred cccEEEecCCCceEEEeeccccccccccccHHHHhhcCeeEEecCCccceEEeechHHHHHHHhcCcc--cccc-ccchh
Q 013012 162 RYNIIGMDPTKQFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAHMYAFNRSVLQEVLDQKDK--FQSL-KQDVL 238 (451)
Q Consensus 162 ~~~~v~~d~~~~~l~~~~~~~~~ek~~~i~~~~~~~~~~~~~~s~l~~~giYi~~~~~l~~~~~~~~~--~~s~-~~d~l 238 (451)
.|+++..|+ ++ +..+. ||+. ...++++++|+|+|++++|+.+ +.... ..++ ..|++
T Consensus 165 ~~g~v~~d~-g~-v~~~~-----ekp~-------------~~~~~~~~~Giy~~~~~~l~~l-~~~~~~~~ge~~l~d~l 223 (269)
T 4ecm_A 165 RFGVANIQN-RK-IIEIE-----EKPK-------------EPKSSYAVTGIYLYDSKVFSYI-KELKPSARGELEITDIN 223 (269)
T ss_dssp GSEEEEEET-TE-EEEEE-----ESCS-------------SCSCSEEEEEEEEECTTHHHHH-TSCCBCTTSCBCHHHHH
T ss_pred CceEEEEcC-CE-EEEEE-----ECCC-------------CCCCcEEEEEEEEECHHHHHhh-hhcCCCCCCeeeHHHHH
Confidence 789888885 54 44554 3321 1135688999999999998654 32211 0111 14555
Q ss_pred hHHHHhccccccccCCCCCCccccccCCCcchhhhhccCCCCCccccccCCCCCCCCCCCcceeEEEEeccchhhhhccC
Q 013012 239 PYLVRSQLKSEILINGAPQGQQAKENGNDKVSYRILANASTPSFHELYALGPNGSAPVRRTHKCCVYIASNSKYCVRLNS 318 (451)
Q Consensus 239 p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 318 (451)
+.++.++ ++.+| ...++|.++++
T Consensus 224 ~~l~~~g-------------------------------------------------------~v~~~--~~~~~~~dIgt 246 (269)
T 4ecm_A 224 NWYLKRG-------------------------------------------------------VLTYN--EMSGWWTDAGT 246 (269)
T ss_dssp HHHHHTT-------------------------------------------------------CEEEE--ECCSCEEECSS
T ss_pred HHHHHcC-------------------------------------------------------CEEEE--EeCCEEEeCCC
Confidence 5554331 22333 23678999999
Q ss_pred HHHHHHHchhcccc
Q 013012 319 IQAFMDINRDVIGE 332 (451)
Q Consensus 319 ~~~y~~~~~~~l~~ 332 (451)
+++|.++++.++..
T Consensus 247 ~~dl~~a~~~l~~~ 260 (269)
T 4ecm_A 247 HVSLQRANALARDI 260 (269)
T ss_dssp HHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999987654
No 10
>1tzf_A Glucose-1-phosphate cytidylyltransferase; nucleotidyltransferase, mixed alpha/beta fold; HET: C5G; 2.10A {Salmonella enterica subsp} SCOP: c.68.1.13 PDB: 1wvc_A*
Probab=99.95 E-value=1.5e-27 Score=222.97 Aligned_cols=228 Identities=18% Similarity=0.321 Sum_probs=160.0
Q ss_pred CCceEEEEecCCCCCCCCCCCCCCcccccccCCcchHHHHHHHHHHCCCcEEEEEecCchhhHHHHHhhhhhcc--Ccee
Q 013012 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYV--DRLH 78 (451)
Q Consensus 1 m~~~avIlAgG~g~Rl~pl~~~~~pK~llpv~gkpli~~~l~~l~~~gi~~iivv~~~~~~~~~i~~~~~~~~~--~~~~ 78 (451)
|+|+|||||||.|+||+|+ |...||+|+|++|+|||+|+++++.++|+++++|++++.. +.+.+++.+... ..+.
T Consensus 1 m~~~avIlAaG~gtRl~~l-t~~~pK~l~~i~gkpli~~~l~~l~~~g~~~i~vv~~~~~--~~i~~~~~~~~~~~~~~~ 77 (259)
T 1tzf_A 1 MASKAVILAGGLGTRLSEE-TIVKPKPMVEIGGKPILWHIMKMYSVHGIKDFIICCGYKG--YVIKEYFANYFLHMSDVT 77 (259)
T ss_dssp CCCEEEEEECSCC---------CCCGGGCEETTEEHHHHHHHHHHHTTCCEEEEEECTTH--HHHHHHHHTHHHHHSCEE
T ss_pred CCcEEEEECCCCcccCCCc-cCCCCccccEECCEEHHHHHHHHHHHCCCCEEEEEcccCH--HHHHHHHhhccccccccc
Confidence 8899999999999999999 8999999999999999999999999999999999998552 466666654210 0111
Q ss_pred -------------------eEEEEcCCCCChHHHHHHHHhcC-CCCcEEEEcCCccCCCCchHHHHHHHhcCceEEEEEe
Q 013012 79 -------------------VEVATVPEDVGTAGALRAIAHHL-TAKDVLVVSGDLVSDVPPGAVTAAHRRHDAVVTAMIC 138 (451)
Q Consensus 79 -------------------~~i~~~~~~~gt~~~l~~~~~~l-~~~~~lvl~~D~i~~~~~~~~l~~~~~~~~~~t~~~~ 138 (451)
+.+..++...||+++++.+++.+ .++++++++||.+++.++.++++.|++.++.+++...
T Consensus 78 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~gt~~al~~a~~~~~~~~~~lv~~~D~~~~~~~~~~~~~~~~~~~~~t~~~~ 157 (259)
T 1tzf_A 78 FHMAENRMEVHHKRVEPWNVTLVDTGDSSMTGGRLKRVAEYVKDDEAFLFTYGDGVADLDIKATIDFHKAHGKKATLTAT 157 (259)
T ss_dssp EEGGGTEEEETTCCCCCCEEEEEECCSSCCHHHHHHHTGGGTTTSSCEEEEETTEEECCCHHHHHHHHHHHCCSEEEEEE
T ss_pred ccccccceeeeeccccccceeeeecccccCcHHHHHHHHHhcCCCCcEEEEECCEecccCHHHHHHHHHHhCCeEEEEEe
Confidence 11222344689999999999888 3567999999988899999999999888777766432
Q ss_pred eeccCCCccCCCCCCcccCCCCCcccEEEecCCCceEEEeeccccccccccccHHHHhhcCeeEEecCCccceEEeechH
Q 013012 139 SVPVSGLSEAGSSGAKDKTKKPGRYNIIGMDPTKQFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAHMYAFNRS 218 (451)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~l~~~~~~~~~ek~~~i~~~~~~~~~~~~~~s~l~~~giYi~~~~ 218 (451)
. .+..|+++.+| +++ +..+. ||+.. .++++++|+|+|+++
T Consensus 158 ~-------------------~~~~~g~v~~~-~g~-v~~~~-----ekp~~--------------~~~~~~~Giy~~~~~ 197 (259)
T 1tzf_A 158 F-------------------PPGRFGALDIQ-AGQ-VRSFQ-----EKPKG--------------DGAMINGGFFVLNPS 197 (259)
T ss_dssp C-------------------CCCCSEEEEEE-TTE-EEEEE-----ESCSC--------------CSCCEECCCEEECGG
T ss_pred c-------------------CCCCccEEEEc-CCE-EEEEE-----ecCCC--------------CCceEEEEEEEeCHH
Confidence 1 14568888888 554 44554 34311 146899999999999
Q ss_pred HHHHHHhcCccccccccchhhHHHHhccccccccCCCCCCccccccCCCcchhhhhccCCCCCccccccCCCCCCCCCCC
Q 013012 219 VLQEVLDQKDKFQSLKQDVLPYLVRSQLKSEILINGAPQGQQAKENGNDKVSYRILANASTPSFHELYALGPNGSAPVRR 298 (451)
Q Consensus 219 ~l~~~~~~~~~~~s~~~d~lp~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (451)
+|..+ +.. ..++..|+++.+++++
T Consensus 198 ~l~~l-~~~--~~~~~~~~i~~~~~~~----------------------------------------------------- 221 (259)
T 1tzf_A 198 VIDLI-DND--ATTWEQEPLMTLAQQG----------------------------------------------------- 221 (259)
T ss_dssp GGGGC-CST--TCCTTTHHHHHHHHTT-----------------------------------------------------
T ss_pred HHHhh-ccc--ccccHHHHHHHHHHcC-----------------------------------------------------
Confidence 88533 221 1234466777665431
Q ss_pred cceeEEEEeccchhhhhccCHHHHHHHchhccc
Q 013012 299 THKCCVYIASNSKYCVRLNSIQAFMDINRDVIG 331 (451)
Q Consensus 299 ~~~~~~~~~~~~~~~~~i~~~~~y~~~~~~~l~ 331 (451)
++.+|.. .++|.+++++++|.++++.+..
T Consensus 222 --~v~~~~~--~~~~~dI~t~~d~~~a~~~~~~ 250 (259)
T 1tzf_A 222 --ELMAFEH--PGFWQPMDTLRDKVYLEGLWEK 250 (259)
T ss_dssp --CEEEEEE--CSCEEECCSHHHHHHHHHHHHT
T ss_pred --CEEEEEe--CcEEEeCCCHHHHHHHHHHHhc
Confidence 1333432 4699999999999999987654
No 11
>2ux8_A Glucose-1-phosphate uridylyltransferase; UGPG, GALU pyrophosphorylase, nucleotidyltransferase; HET: G1P; 2.65A {Sphingomonas elodea}
Probab=99.95 E-value=3.2e-27 Score=225.03 Aligned_cols=187 Identities=18% Similarity=0.227 Sum_probs=128.4
Q ss_pred CceEEEEecCCCCCCCCCCCCCCcccccccCCcchHHHHHHHHHHCCCcEEEEEecCchhhHHHHHhhhhhc--------
Q 013012 2 DFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAY-------- 73 (451)
Q Consensus 2 ~~~avIlAgG~g~Rl~pl~~~~~pK~llpv~gkpli~~~l~~l~~~gi~~iivv~~~~~~~~~i~~~~~~~~-------- 73 (451)
.++|||||||.|+||+|+ |...||+|+|++|+|||+|+++++.++|+++++|++++. .+.+.+++.+.+
T Consensus 14 ~~~avIlAaG~gtRl~pl-t~~~pK~ll~i~gkpli~~~l~~l~~~g~~~i~vv~~~~--~~~i~~~~~~~~~l~~~l~~ 90 (297)
T 2ux8_A 14 LRKAVFPVAGLGTRFLPA-TKAMPKEMLPVVDRPLIQYAVDEAVEAGIEQMIFVTGRG--KSALEDHFDIAYELEATMAA 90 (297)
T ss_dssp CCEEEEEECCCCGGGTTT-TSSSCGGGCEETTEEHHHHHHHHHHHTTCCEEEEEECTT--CHHHHHHTSCCHHHHHHHHT
T ss_pred ccEEEEECCCCccccCcc-ccCCCceeeeECCeEHHHHHHHHHHhCCCCEEEEEeCCC--HHHHHHHHhhhhhhhhhhhh
Confidence 579999999999999999 899999999999999999999999999999999999854 345666654310
Q ss_pred ------------cCceeeEEEEcCCCCChHHHHHHHHhcCCCCcEEEEcCCccCC---CCchHHHHHHHhcCceEEEEEe
Q 013012 74 ------------VDRLHVEVATVPEDVGTAGALRAIAHHLTAKDVLVVSGDLVSD---VPPGAVTAAHRRHDAVVTAMIC 138 (451)
Q Consensus 74 ------------~~~~~~~i~~~~~~~gt~~~l~~~~~~l~~~~~lvl~~D~i~~---~~~~~~l~~~~~~~~~~t~~~~ 138 (451)
.....+.++.++...||+++++.+++.+.+++|+|++||.+++ .++..+++.|++.++ .++.+.
T Consensus 91 ~~~~~~~~~~~~~~g~~i~~~~~~~~~Gt~~al~~a~~~~~~~~~lv~~~D~~~~~~~~~l~~l~~~~~~~~~-~~i~~~ 169 (297)
T 2ux8_A 91 RGKSLDVLDGTRLKPGNIAYVRQQEPMGLGHAVWCARDIVGDEPFAVLLPDDFMFGQPGCLKQMVDAYNKVGG-NLICAE 169 (297)
T ss_dssp TTCCGGGGTTSCCSTTSEEEEECCSCCCHHHHHHTTHHHHCSSCEEEECTTEEEESSSCHHHHHHHHHHHHCS-EEEEEC
T ss_pred ccchhhhhhhcccCCCceEEEeCCCCCChHHHHHHHHHHcCCCcEEEEeCCeecCCChHHHHHHHHHHHhcCC-CEEEEE
Confidence 0112466666677799999999998887667899999996555 679999999987765 455444
Q ss_pred eeccCCCccCCCCCCcccCCCCCcccEEEecC--CC-ceEEEeeccccccccccccHHHHhhcCeeEEecCCccceEEee
Q 013012 139 SVPVSGLSEAGSSGAKDKTKKPGRYNIIGMDP--TK-QFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAHMYAF 215 (451)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~--~~-~~l~~~~~~~~~ek~~~i~~~~~~~~~~~~~~s~l~~~giYi~ 215 (451)
..+.. .+..||++..|+ ++ ..+..+. ||+.. ....++++++|+|+|
T Consensus 170 ~~~~~---------------~~~~yg~v~~~~~~~~~~~v~~~~-----ekp~~-----------~~~~~~~~~~Giyi~ 218 (297)
T 2ux8_A 170 EVPDD---------------QTHRYGIITPGTQDGVLTEVKGLV-----EKPAP-----------GTAPSNLSVIGRYIL 218 (297)
T ss_dssp --------------------------CCCCCCBCSSEEEC------------------------------CCCEEEEEEE
T ss_pred ecCcc---------------cCCCCCeEEecccCCCceeEEEEE-----ECCCC-----------CCCCccEEEEEEEEE
Confidence 33211 245678776653 33 1233333 33210 022357899999999
Q ss_pred chHHHHHH
Q 013012 216 NRSVLQEV 223 (451)
Q Consensus 216 ~~~~l~~~ 223 (451)
++++|+.+
T Consensus 219 ~~~~l~~l 226 (297)
T 2ux8_A 219 QPEVMRIL 226 (297)
T ss_dssp CTHHHHHH
T ss_pred CHHHHHHH
Confidence 99988654
No 12
>1fxo_A Glucose-1-phosphate thymidylyltransferase; rhamnose, nucleotidyltransferase, pyrophosphorylase, allostery; HET: TMP; 1.66A {Pseudomonas aeruginosa} SCOP: c.68.1.6 PDB: 1fzw_A 1g0r_A* 1g1l_A* 1g23_A* 1g2v_A* 1g3l_A* 1h5r_A* 1h5s_C* 1h5t_A* 1h5s_D* 1h5s_A* 1h5r_B* 1h5s_B* 1h5t_B* 1iim_A* 1iin_A* 3pkp_A* 3pkq_A* 1mp5_A* 1mp3_A* ...
Probab=99.95 E-value=1e-26 Score=220.39 Aligned_cols=186 Identities=21% Similarity=0.347 Sum_probs=141.7
Q ss_pred CCceEEEEecCCCCCCCCCCCCCCcccccccCCcchHHHHHHHHHHCCCcEEEEEecCchhhHHHHHhhhhhccCceeeE
Q 013012 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVE 80 (451)
Q Consensus 1 m~~~avIlAgG~g~Rl~pl~~~~~pK~llpv~gkpli~~~l~~l~~~gi~~iivv~~~~~~~~~i~~~~~~~~~~~~~~~ 80 (451)
|+++|||||||.|+||+|+ |...||+|+|++|||||+|+++.+..+|+++|+|++.+++ .+.+++++.+.......+.
T Consensus 1 M~~~aIILAgG~gtRl~pl-T~~~pK~llpi~gkpli~~~l~~l~~~gi~~I~vv~~~~~-~~~i~~~l~~g~~~g~~i~ 78 (293)
T 1fxo_A 1 MKRKGIILAGGSGTRLHPA-TLAISKQLLPVYDKPMIYYPLSTLMLAGIREILIISTPQD-TPRFQQLLGDGSNWGLDLQ 78 (293)
T ss_dssp -CEEEEEECCCCCTTTTTH-HHHSCGGGSEETTEETTHHHHHHHHHTTCCEEEEEECTTT-HHHHHHHHTTSGGGTCEEE
T ss_pred CCceEEEECCCCCCcCccc-cCCCCceeCeECCEeHHHHHHHHHHHCCCCEEEEEecccc-HHHHHHHHhcccccCceEE
Confidence 8899999999999999999 8889999999999999999999999999999998885332 3456666654211122355
Q ss_pred EEEcCCCCChHHHHHHHHhcCCCCcEEEEcCC-ccCCCCchHHHHHHHhcCceEEEEEeeeccCCCccCCCCCCcccCCC
Q 013012 81 VATVPEDVGTAGALRAIAHHLTAKDVLVVSGD-LVSDVPPGAVTAAHRRHDAVVTAMICSVPVSGLSEAGSSGAKDKTKK 159 (451)
Q Consensus 81 i~~~~~~~gt~~~l~~~~~~l~~~~~lvl~~D-~i~~~~~~~~l~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (451)
++.++.+.|++++++.+.+++.+++++++.|| .+.+.++..+++.|.+.+..++++..++. +
T Consensus 79 ~~~~~~~~G~~~al~~a~~~i~~~~~~lv~gD~~~~~~~l~~~l~~~~~~~~~~~v~~~~v~-----------------d 141 (293)
T 1fxo_A 79 YAVQPSPDGLAQAFLIGESFIGNDLSALVLGDNLYYGHDFHELLGSASQRQTGASVFAYHVL-----------------D 141 (293)
T ss_dssp EEECSSCCCGGGHHHHTHHHHTTSEEEEEETTEEEECTTHHHHHHHHHTCCSSEEEEEEECS-----------------C
T ss_pred EeeCCCCCCHHHHHHHHHHHhCCCCEEEEECChhccCccHHHHHHHHHhcCCCcEEEEEECC-----------------C
Confidence 66667789999999999888866778888899 44467899999999776666776665432 2
Q ss_pred CCcccEEEecCCCceEEEeeccccccccccccHHHHhhcCeeEEecCCccceEEeechHHHHHHH
Q 013012 160 PGRYNIIGMDPTKQFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAHMYAFNRSVLQEVL 224 (451)
Q Consensus 160 ~~~~~~v~~d~~~~~l~~~~~~~~~ek~~~i~~~~~~~~~~~~~~s~l~~~giYi~~~~~l~~~~ 224 (451)
+.+||++.+|++++++ .+. ||+. ...++++++|+|+|++++|..+.
T Consensus 142 p~~~g~v~~d~~g~v~-~~~-----ekp~-------------~~~s~~~~~Giy~~~~~~l~~~~ 187 (293)
T 1fxo_A 142 PERYGVVEFDQGGKAI-SLE-----EKPL-------------EPKSNYAVTGLYFYDQQVVDIAR 187 (293)
T ss_dssp GGGSEEEEECTTSCEE-EEE-----ESCS-------------SCSSSEEEEEEEEECTTHHHHHH
T ss_pred cccCcEEEECCCCcEE-EEE-----ECCC-------------CCCCCeEEEEEEEEcHHHHHHHH
Confidence 4578999999877654 443 3321 11356889999999999987553
No 13
>2e3d_A UTP--glucose-1-phosphate uridylyltransferase; UDP-glucose, carbohydrate, pyrophosphorylase; 1.95A {Escherichia coli}
Probab=99.95 E-value=2.2e-26 Score=219.85 Aligned_cols=184 Identities=14% Similarity=0.284 Sum_probs=137.2
Q ss_pred ceEEEEecCCCCCCCCCCCCCCcccccccCCcchHHHHHHHHHHCCCcEEEEEecCchhhHHHHHhhhhhc---------
Q 013012 3 FQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAY--------- 73 (451)
Q Consensus 3 ~~avIlAgG~g~Rl~pl~~~~~pK~llpv~gkpli~~~l~~l~~~gi~~iivv~~~~~~~~~i~~~~~~~~--------- 73 (451)
|+|||||||.|+||+|+ |...||+|+|++|+|||+|+++++.++|+++++|++++. .+.+.+++...+
T Consensus 9 ~~avIlAaG~gtRl~pl-t~~~pK~ll~i~gkpli~~~l~~l~~~gi~~i~vv~~~~--~~~i~~~~~~~~~l~~~l~~~ 85 (302)
T 2e3d_A 9 KKAVIPVAGLGTRMLPA-TKAIPKEMLPLVDKPLIQYVVNECIAAGITEIVLVTHSS--KNSIENHFDTSFELEAMLEKR 85 (302)
T ss_dssp CEEEEECCSCCGGGTTT-TSSSCGGGCEETTEEHHHHHHHHHHHTTCCEEEEEECGG--GHHHHHHHSCCHHHHHHHC--
T ss_pred cEEEEECCcCcccCCcc-ccCCCceeeEECCeEHHHHHHHHHHHCCCCEEEEEeCCC--HHHHHHHHhcchhhhhhhhhc
Confidence 79999999999999999 999999999999999999999999999999999999854 345666654311
Q ss_pred -------------cCceeeEEEEcCCCCChHHHHHHHHhcCCCCcEEEEcCCccCC-----C---CchHHHHHHHhcCce
Q 013012 74 -------------VDRLHVEVATVPEDVGTAGALRAIAHHLTAKDVLVVSGDLVSD-----V---PPGAVTAAHRRHDAV 132 (451)
Q Consensus 74 -------------~~~~~~~i~~~~~~~gt~~~l~~~~~~l~~~~~lvl~~D~i~~-----~---~~~~~l~~~~~~~~~ 132 (451)
.....+.++.++...||+++++.+++.+.+++|+|++||.+++ . ++..+++.|++.++
T Consensus 86 ~~~~~l~~~~~~~~~~~~i~~~~~~~~~Gt~~al~~a~~~~~~~~~lv~~~D~~~~~~~~~~~~~~l~~l~~~~~~~~~- 164 (302)
T 2e3d_A 86 VKRQLLDEVQSICPPHVTIMQVRQGLAKGLGHAVLCAHPVVGDEPVAVILPDVILDEYESDLSQDNLAEMIRRFDETGH- 164 (302)
T ss_dssp --CHHHHHHHHTSCTTCEEEEEECSSCCCHHHHHHHTHHHHCSSCEEEECTTEEECTTSSCTTTSTHHHHHHHHHHHCC-
T ss_pred cchhhhhhhhhccccCcceEEeeCCccCCHHHHHHHHHHHcCCCcEEEEcCCccccCccccchHHHHHHHHHHHHhcCC-
Confidence 0122355666677799999999998888667899999996555 3 79999999988776
Q ss_pred EEEEEeeeccCCCccCCCCCCcccCCCCCcccEEEec----CCCc--eEEEeeccccccccccccHHHHhhcCeeEEecC
Q 013012 133 VTAMICSVPVSGLSEAGSSGAKDKTKKPGRYNIIGMD----PTKQ--FLLHIATGAELEKDTRIRKSILRAVGQMDIRAD 206 (451)
Q Consensus 133 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d----~~~~--~l~~~~~~~~~ek~~~i~~~~~~~~~~~~~~s~ 206 (451)
+++++.... .+..||++..+ +++. .+..+. ||+.. . ...++
T Consensus 165 ~~i~~~~~~-----------------~~~~yg~v~~~~~~~~~g~~~~v~~~~-----ekp~~------~-----~~~~~ 211 (302)
T 2e3d_A 165 SQIMVEPVA-----------------DVTAYGVVDCKGVELAPGESVPMVGVV-----EKPKA------D-----VAPSN 211 (302)
T ss_dssp EEEEEEECS-----------------CGGGSEEEECTTCCCCTTCEEEECEEE-----ESCCT------T-----TCSCS
T ss_pred cEEEEEEcc-----------------CCCCccEEEecccccCCCCceeEEEEE-----ECCCC------C-----ccccc
Confidence 565554431 24578888764 3341 344444 33210 0 11246
Q ss_pred CccceEEeechHHHHHH
Q 013012 207 LMDAHMYAFNRSVLQEV 223 (451)
Q Consensus 207 l~~~giYi~~~~~l~~~ 223 (451)
++++|+|+|++++|..+
T Consensus 212 ~~~~Giyi~~~~~l~~l 228 (302)
T 2e3d_A 212 LAIVGRYVLSADIWPLL 228 (302)
T ss_dssp EEEEEEEEECTTHHHHH
T ss_pred eEEEEEEEECHHHHHHH
Confidence 88999999999988654
No 14
>3pnn_A Conserved domain protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE GOL; 1.90A {Porphyromonas gingivalis}
Probab=99.94 E-value=3e-26 Score=218.51 Aligned_cols=201 Identities=15% Similarity=0.147 Sum_probs=141.6
Q ss_pred CCceEEEEecCCCCCCCCCCCCCCccccccc--CCcchHHHHHHHHHHCCCcEEEEEecCchhhHHHHHhhhhhccCcee
Q 013012 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPV--ANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLH 78 (451)
Q Consensus 1 m~~~avIlAgG~g~Rl~pl~~~~~pK~llpv--~gkpli~~~l~~l~~~gi~~iivv~~~~~~~~~i~~~~~~~~~~~~~ 78 (451)
|+++|||||||.|+||+| ||+|+|+ +|+|||+|+++++.++|+++++|++++.. .+.+.+++.+.+....+
T Consensus 4 m~~~~vIlAaG~g~R~~~------~K~l~~ig~~g~pli~~~l~~~~~~~~~~i~vv~~~~~-~~~~~~~~~~~~~~~~~ 76 (303)
T 3pnn_A 4 MKPTLFVLAAGMGSRYGS------LKQLDGIGPGGDTIMDYSVYDAIRAGFGRLVFVIRHSF-EKEFREKILTKYEGRIP 76 (303)
T ss_dssp CCCEEEEECTTCBCTTSS------BCCCCCCSTTSCCHHHHHHHHHHHHTCCEEEEEECGGG-HHHHHHHTHHHHTTTSC
T ss_pred CceEEEEECCCCcccCCC------CceEeEcCCCCeeHHHHHHHHHHHCCCCeEEEEcCchH-HHHHHHHHHHHhccCCc
Confidence 678999999999999954 6999999 59999999999999999999999998542 24677777654333345
Q ss_pred eEEEEcC---------------CCCChHHHHHHHHhcCCCCcEEEEcCCccCCCC-chHHHHHHHh---cCceEEEEEee
Q 013012 79 VEVATVP---------------EDVGTAGALRAIAHHLTAKDVLVVSGDLVSDVP-PGAVTAAHRR---HDAVVTAMICS 139 (451)
Q Consensus 79 ~~i~~~~---------------~~~gt~~~l~~~~~~l~~~~~lvl~~D~i~~~~-~~~~l~~~~~---~~~~~t~~~~~ 139 (451)
+.++.++ ++.||+++++.+++++ +++|+|++||.+++.+ +..++++|.+ .++++++++..
T Consensus 77 i~~~~~~~~~~~~~~~~~~~~~~~~Gt~~al~~a~~~i-~~~~lV~~gD~l~~~~~~~~l~~~~~~~~~~~~~~~v~~~~ 155 (303)
T 3pnn_A 77 VELVFQELDRLPEGFSCPEGREKPWGTNHAVLMGRDAI-REPFAVINADDFYGRNGFEVLARKLMTLEGKQGEYCMVGYR 155 (303)
T ss_dssp EEEEECCTTCCCTTCCCCTTCCSCCCHHHHHHTTTTTC-CSCEEEEESSCBCCHHHHHHHHHHHHTTTTCSSEEEEEEEE
T ss_pred EEEEecccccccccccccccccccCCcHHHHHHHHHhc-CCCEEEEECCeecCHHHHHHHHHHHHHhccccCceEEEEEE
Confidence 6777665 5689999999999998 6889999999887775 8999999986 56788888776
Q ss_pred eccCCC-ccCCCCCCcccCCCCCcccEEEecCCCceEEEeeccccccccccccHHHHh-hcCe-e-EEecCCccceEEee
Q 013012 140 VPVSGL-SEAGSSGAKDKTKKPGRYNIIGMDPTKQFLLHIATGAELEKDTRIRKSILR-AVGQ-M-DIRADLMDAHMYAF 215 (451)
Q Consensus 140 ~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~d~~~~~l~~~~~~~~~ek~~~i~~~~~~-~~~~-~-~~~s~l~~~giYi~ 215 (451)
.. +| +.++ ...+|++.+|++++ +..+.++++......- .... ..+. . ...++++++|+|+|
T Consensus 156 ~~--~~~~~~g----------~~~~G~v~~d~~g~-v~~i~Ekp~~~~~~~~--~~~~~~~g~~~~~~~~~~i~~GiY~f 220 (303)
T 3pnn_A 156 VG--NTLSESG----------GVSRGVCQVDEKHL-LTGVVERTGIERTDGT--ISFRDETGKICTLAEDAPVSMNMWGF 220 (303)
T ss_dssp GG--GSCBTTB----------CEEEEEEEECTTSB-EEEEEEEEEEEEETTE--EEEECTTSCEEEECTTCEEEEEEEEE
T ss_pred CC--CccCccC----------ceeeeeEeeCCCCc-EEEEEECCCCcccccc--ccccccccccccCCCCCEEEEEEEEE
Confidence 53 22 2111 11246888988776 4455532211000000 0000 0000 0 01367999999999
Q ss_pred chHHHHHHH
Q 013012 216 NRSVLQEVL 224 (451)
Q Consensus 216 ~~~~l~~~~ 224 (451)
++++|..+.
T Consensus 221 ~~~~~~~l~ 229 (303)
T 3pnn_A 221 TPDYFDYSE 229 (303)
T ss_dssp CTHHHHHHH
T ss_pred CHHHHHHHH
Confidence 999987653
No 15
>2pa4_A UTP-glucose-1-phosphate uridylyltransferase; phosphorylase, nucleotidyltransferase, metabolism; HET: GUD; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.94 E-value=1.4e-26 Score=222.93 Aligned_cols=239 Identities=17% Similarity=0.197 Sum_probs=166.0
Q ss_pred CceEEEEecCCCCCCCCCCCCCCcccccccCCcchHHHHHHHHHHCCCcEEEEEecCchhhHHHHHhhhhhc--------
Q 013012 2 DFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAY-------- 73 (451)
Q Consensus 2 ~~~avIlAgG~g~Rl~pl~~~~~pK~llpv~gkpli~~~l~~l~~~gi~~iivv~~~~~~~~~i~~~~~~~~-------- 73 (451)
.|+|||||||.|+||+|+ |...||+|+|++|+|||+|+++++..+|+++++|++++. .+.+.+++...+
T Consensus 12 ~~~aVIlAaG~gtRl~pl-t~~~pK~ll~i~gkpli~~~l~~l~~~gi~~iivv~~~~--~~~i~~~~~~~~~~~~~l~~ 88 (323)
T 2pa4_A 12 VKTVVVPAAGLGTRFLPA-TKTVPKELLPVVDTPGIELIAAEAAELGATRLAIITAPN--KAGVLAHFERSSELEETLME 88 (323)
T ss_dssp CCEEEEECCCCCGGGTTG-GGTSCGGGCEETTEEHHHHHHHHHHHTTCCEEEEEECTT--CHHHHHTTSCCHHHHHHHHH
T ss_pred ceEEEEECCCCccccCcc-ccCCCceeeeECCEEHHHHHHHHHHhCCCCEEEEEecCc--HHHHHHHHhccchhhhhhhc
Confidence 489999999999999999 899999999999999999999999999999999999864 235555543210
Q ss_pred -------------cCceeeEEEEcCCCCChHHHHHHHHhcCCCCc--EEEEcCCccCC--CCchHHHHHHHhcCceEEEE
Q 013012 74 -------------VDRLHVEVATVPEDVGTAGALRAIAHHLTAKD--VLVVSGDLVSD--VPPGAVTAAHRRHDAVVTAM 136 (451)
Q Consensus 74 -------------~~~~~~~i~~~~~~~gt~~~l~~~~~~l~~~~--~lvl~~D~i~~--~~~~~~l~~~~~~~~~~t~~ 136 (451)
.....+.++.++...||+++++.+++.+.+++ |+|++||.+++ .++..+++.|++.++ .++.
T Consensus 89 ~~~~~~~~~~~~~~~g~~i~~~~~~~~~Gt~~al~~a~~~l~~~~d~~lv~~~D~~~~~~~~l~~l~~~~~~~~~-~~i~ 167 (323)
T 2pa4_A 89 RGKTDQVEIIRRAADLIKAVPVTQDKPLGLGHAVGLAESVLDDDEDVVAVMLPDDLVLPTGVMERMAQVRAEFGG-SVLC 167 (323)
T ss_dssp TTCHHHHHHTTHHHHHCEEEEEECSSCCCHHHHHHTTGGGSCSSCCEEEEECTTEEEESSCHHHHHHHHHHTTCS-EEEE
T ss_pred cchhhhhhhhhccccCcceEEEeCCccCCcHHHHHHHHHHhcCCCCeEEEEeCCcccCchHHHHHHHHHHHhcCC-cEEE
Confidence 00123555666677999999999998886555 99999995555 689999999987765 3454
Q ss_pred EeeeccCCCccCCCCCCcccCCCCCcccEEEec----CCC-ceEEEeeccccccccccccHHHHhhcCeeEEecCCccce
Q 013012 137 ICSVPVSGLSEAGSSGAKDKTKKPGRYNIIGMD----PTK-QFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAH 211 (451)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d----~~~-~~l~~~~~~~~~ek~~~i~~~~~~~~~~~~~~s~l~~~g 211 (451)
+...+.. .+..||++..| +++ ..+..+.+ |+.. ....++++++|
T Consensus 168 ~~~~~~~---------------~~~~yg~v~~d~~~~~~~~~~V~~~~E-----kp~~-----------~~~~~~~~~~G 216 (323)
T 2pa4_A 168 AVEVSEA---------------DVSKYGIFEIEADTKDSDVKKVKGMVE-----KPAI-----------EDAPSRLAATG 216 (323)
T ss_dssp EEECCGG---------------GGGGSEEEEEEECCSSTTEEEEEEEEE-----SCCT-----------TTCSCSEEEEE
T ss_pred EEEeccc---------------ccCCccEEEeCCcccCCCceeEEEEEE-----CCCC-----------ccccccEEEEE
Confidence 4443211 14578888776 443 24555543 3210 01124678999
Q ss_pred EEeechHHHHHHHhcCccc-cccc-cchhhHHHHhccccccccCCCCCCccccccCCCcchhhhhccCCCCCccccccCC
Q 013012 212 MYAFNRSVLQEVLDQKDKF-QSLK-QDVLPYLVRSQLKSEILINGAPQGQQAKENGNDKVSYRILANASTPSFHELYALG 289 (451)
Q Consensus 212 iYi~~~~~l~~~~~~~~~~-~s~~-~d~lp~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (451)
+|+|++++|..+.....+. ..+. .++++.+++++
T Consensus 217 iY~~~~~~~~~l~~~~~~~~ge~~l~d~i~~l~~~g-------------------------------------------- 252 (323)
T 2pa4_A 217 RYLLDRKIFDALRRITPGAGGELQLTDAIDLLIDEG-------------------------------------------- 252 (323)
T ss_dssp EEEEETHHHHHHHHCCCCGGGCCCHHHHHHHHHHTT--------------------------------------------
T ss_pred EEEECHHHHHHHHhhCCCCCCeEeHHHHHHHHHHcC--------------------------------------------
Confidence 9999999887653322110 1111 45565554331
Q ss_pred CCCCCCCCCcceeEEEEeccchhhhhccCHHHHHHHchhccc
Q 013012 290 PNGSAPVRRTHKCCVYIASNSKYCVRLNSIQAFMDINRDVIG 331 (451)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~y~~~~~~~l~ 331 (451)
.++.+|. ..++|.+++++++|.++++.++.
T Consensus 253 ----------~~v~~~~--~~g~w~DIgt~~dl~~a~~~~~~ 282 (323)
T 2pa4_A 253 ----------HPVHIVI--HQGKRHDLGNPGGYIPACVDFGL 282 (323)
T ss_dssp ----------CCEEEEE--CCSEEEECSSHHHHHHHHHHHHH
T ss_pred ----------CCEEEEE--eCCeEEeCCCHHHHHHHHHHHhh
Confidence 1244443 34689999999999999987654
No 16
>1lvw_A Glucose-1-phosphate thymidylyltransferase; protein nucleotide complex, nucleotide binding fold; HET: TYD; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.68.1.6
Probab=99.94 E-value=7.2e-26 Score=214.60 Aligned_cols=185 Identities=19% Similarity=0.321 Sum_probs=141.1
Q ss_pred CceEEEEecCCCCCCCCCCCCCCcccccccCCcchHHHHHHHHHHCCCcEEEEEecCchhhHHHHHhhhhhccCceeeEE
Q 013012 2 DFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVEV 81 (451)
Q Consensus 2 ~~~avIlAgG~g~Rl~pl~~~~~pK~llpv~gkpli~~~l~~l~~~gi~~iivv~~~~~~~~~i~~~~~~~~~~~~~~~i 81 (451)
+|+|||||||.|+||+|+ |...||+|+|++|||||+|+++.+..+|+++|+|++++++ .+.+++++.+.......+.+
T Consensus 3 ~m~aIILAgG~GtRl~pl-T~~~pK~llpi~gkpli~~~l~~l~~~gi~~Iivv~~~~~-~~~i~~~l~~g~~~g~~i~~ 80 (295)
T 1lvw_A 3 HMKGIVLAGGSGTRLYPI-TRAVSKQLLPIYDKPMIYYPLSVLMLAGIRDILIISTPRD-LPLYRDLLGDGSQFGVRFSY 80 (295)
T ss_dssp SCEEEEECCCCCSTTTTT-TTSSCGGGSEETTEETTHHHHHHHHHTTCCEEEEEECTTT-HHHHHHHHTTSGGGTSEEEE
T ss_pred ceEEEEECCCCCCccccc-cCCCCceecEECCeeHHHHHHHHHHHCCCCeEEEEeccch-HHHHHHHhhhccccCceEEE
Confidence 479999999999999999 8999999999999999999999999999999999886332 34566666542111223556
Q ss_pred EEcCCCCChHHHHHHHHhcCCCCcEEEEcCCc-cCCCCchHHHHHHHhcCceEEEEEeeeccCCCccCCCCCCcccCCCC
Q 013012 82 ATVPEDVGTAGALRAIAHHLTAKDVLVVSGDL-VSDVPPGAVTAAHRRHDAVVTAMICSVPVSGLSEAGSSGAKDKTKKP 160 (451)
Q Consensus 82 ~~~~~~~gt~~~l~~~~~~l~~~~~lvl~~D~-i~~~~~~~~l~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (451)
+.++.+.|++++++.+.+++.+++++++.||. +.+.++..+++.|.+.+..+++++.++. ++
T Consensus 81 ~~~~~~~G~~~al~~a~~~i~~~~~~lv~gD~~~~~~~l~~~l~~~~~~~~~~~v~~~~v~-----------------dp 143 (295)
T 1lvw_A 81 RVQEEPRGIADAFIVGKDFIGDSKVALVLGDNVFYGHRFSEILRRAASLEDGAVIFGYYVR-----------------DP 143 (295)
T ss_dssp EECSSCCCGGGHHHHTHHHHTTSCEEEEETTCCEECTTHHHHHHHHHTCCSSEEEEEEECS-----------------CC
T ss_pred eeCCCCCChHHHHHHHHHHhCCCcEEEEECCccccCcCHHHHHHHHHHcCCCcEEEEEECC-----------------Cc
Confidence 66677789999999998888667788888994 4467999999999776666676665432 25
Q ss_pred CcccEEEecCCCceEEEeeccccccccccccHHHHhhcCeeEEecCCccceEEeechHHHHHHH
Q 013012 161 GRYNIIGMDPTKQFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAHMYAFNRSVLQEVL 224 (451)
Q Consensus 161 ~~~~~v~~d~~~~~l~~~~~~~~~ek~~~i~~~~~~~~~~~~~~s~l~~~giYi~~~~~l~~~~ 224 (451)
.+|+++.+|++++++ .+. ||+. ...++++++|+|+|+++++..+.
T Consensus 144 ~~~g~v~~d~~g~v~-~~~-----ekp~-------------~~~s~~~~~Giy~f~~~~l~~~~ 188 (295)
T 1lvw_A 144 RPFGVVEFDSEGRVI-SIE-----EKPS-------------RPKSNYVVPGLYFYDNQVVEIAR 188 (295)
T ss_dssp TTSEEEEECTTSBEE-EEE-----ESCS-------------SCSCSEECCSEEEECTTHHHHHH
T ss_pred ccCCEEEECCCCcEE-EEE-----ECCC-------------CCCCCEEEEEeEEEcHHHHHHHH
Confidence 578999999887654 443 3321 11346889999999999987553
No 17
>1mc3_A Glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylytransferase, RFFH; HET: TTP; 2.60A {Escherichia coli} SCOP: c.68.1.6
Probab=99.94 E-value=4.7e-26 Score=215.98 Aligned_cols=183 Identities=20% Similarity=0.335 Sum_probs=139.4
Q ss_pred ceEEEEecCCCCCCCCCCCCCCcccccccCCcchHHHHHHHHHHCCCcEEEEEecCchhhHHHHHhhhhhccCceeeEEE
Q 013012 3 FQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVEVA 82 (451)
Q Consensus 3 ~~avIlAgG~g~Rl~pl~~~~~pK~llpv~gkpli~~~l~~l~~~gi~~iivv~~~~~~~~~i~~~~~~~~~~~~~~~i~ 82 (451)
|+|||||||.|+||+|+ |...||+|+|++|||||+|+++.+..+|+++|+|++++++ .+.+++++.+.......+.++
T Consensus 4 m~aIILAgG~GtRl~pl-T~~~pK~llpi~gkpli~~~l~~l~~~gi~~I~vv~~~~~-~~~i~~~l~~g~~~g~~i~~~ 81 (296)
T 1mc3_A 4 MKGIILAGGSGTRLHPI-TRGVSKQLLPIYDKPMIYYPLSVLMLAGIREILIITTPED-KGYFQRLLGDGSEFGIQLEYA 81 (296)
T ss_dssp CEEEEECCCCCGGGHHH-HTTSCGGGSEETTEETTHHHHHHHHHTTCCEEEEEECTTT-HHHHHHHHTTSGGGTCEEEEE
T ss_pred cEEEEECCCCCCcCCcc-cCCCCceeeEECCeeHHHHHHHHHHhCCCCcEEEEechhH-HHHHHHHHhcccccCceEEEe
Confidence 78999999999999999 8899999999999999999999999999999999886332 345666665421112235566
Q ss_pred EcCCCCChHHHHHHHHhcCCCCcEEEEcCC-ccCCCCchHHHHHHHhcCceEEEEEeeeccCCCccCCCCCCcccCCCCC
Q 013012 83 TVPEDVGTAGALRAIAHHLTAKDVLVVSGD-LVSDVPPGAVTAAHRRHDAVVTAMICSVPVSGLSEAGSSGAKDKTKKPG 161 (451)
Q Consensus 83 ~~~~~~gt~~~l~~~~~~l~~~~~lvl~~D-~i~~~~~~~~l~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (451)
.++...|++++++.+.+++.+++++++.|| .+.+.++..+++.|.+.+..++++..++. ++.
T Consensus 82 ~~~~~~G~~~al~~a~~~i~~~~~~lv~gD~~~~~~~l~~~l~~~~~~~~~~~v~~~~v~-----------------dp~ 144 (296)
T 1mc3_A 82 EQPSPDGLAQAFIIGETFLNGEPSCLVLGDNIFFGQGFSPKLRHVAARTEGATVFGYQVM-----------------DPE 144 (296)
T ss_dssp ECSSCCCSTHHHHHTHHHHTTSCEEEEETTEEEECSSCHHHHHHHTTCCSSEEEEEEECS-----------------CCS
T ss_pred ccCCCCCHHHHHHHHHHHhCCCCEEEEECCccccccCHHHHHHHHHHcCCCCEEEEEECC-----------------Ccc
Confidence 667779999999999888866678888899 44567999999999766666676655432 255
Q ss_pred cccEEEecCCCceEEEeeccccccccccccHHHHhhcCeeEEecCCccceEEeechHHHHHH
Q 013012 162 RYNIIGMDPTKQFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAHMYAFNRSVLQEV 223 (451)
Q Consensus 162 ~~~~v~~d~~~~~l~~~~~~~~~ek~~~i~~~~~~~~~~~~~~s~l~~~giYi~~~~~l~~~ 223 (451)
+||++.+|+++++ ..+. ||+. ...++++++|+|+|+++++..+
T Consensus 145 ~yg~v~~d~~g~v-~~~~-----ekp~-------------~~~s~~~~~Giy~~~~~~l~~~ 187 (296)
T 1mc3_A 145 RFGVVEFDDNFRA-ISLE-----EKPK-------------QPKSNWAVTGLYFYDSKVVEYA 187 (296)
T ss_dssp SSBBCEEETTEEE-EECC-----BSCS-------------SCSCSEEEEEEEECCTHHHHHH
T ss_pred cCCEEEECCCCcE-EEEE-----ECCC-------------CCCCCEEEEEEEEEcHHHHHHH
Confidence 7899988877654 4443 3331 1134688999999999998755
No 18
>4evw_A Nucleoside-diphosphate-sugar pyrophosphorylase; structural genomics, PSI-biology; HET: MSE; 1.90A {Vibrio cholerae}
Probab=99.94 E-value=1.5e-25 Score=208.23 Aligned_cols=168 Identities=14% Similarity=0.165 Sum_probs=124.2
Q ss_pred EEEEecCCCCCCCCCCCCCCcccccccCCcchHHHHHHHHHH-CCCcEEEEEecCchh-hHHHHHhhhhhccCceeeEEE
Q 013012 5 VVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLEL-SNIKDLIVVVEGADA-ALRVGGWISAAYVDRLHVEVA 82 (451)
Q Consensus 5 avIlAgG~g~Rl~pl~~~~~pK~llpv~gkpli~~~l~~l~~-~gi~~iivv~~~~~~-~~~i~~~~~~~~~~~~~~~i~ 82 (451)
+||||||.|+||+|+ |...||+|+|++|||||+|+|+++.+ +|+++++|++++... .+.+.+.+.++.... ...++
T Consensus 2 ~iIlAaG~GtRl~pl-t~~~PK~llpv~gkpli~~~l~~l~~~~gi~~iivv~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 79 (255)
T 4evw_A 2 IVIPMAGMSSRFFKA-GYTQPKYMLEAHGQTLFEHSVNSFAAYFASTPFLFIVRNVYDTAVFVREKATQLGIKQ-FYIAE 79 (255)
T ss_dssp EEEECCSCCHHHHHT-TCCSCGGGCEETTEEHHHHHHGGGGGGTTTSCEEEEEESSTTHHHHHHHHHHHHTCSS-EEEEE
T ss_pred EEEEcCCCCcccccC-CCCCCccccEECCeEHHHHHHHHHhccCCCceEEEEECchhhhHHHHHHHHHHcCCCC-ceEEE
Confidence 899999999999999 88999999999999999999999999 799999999986521 123333332211111 12345
Q ss_pred EcCCCCChHHHHHHHHhcC------CCCcEEEEcCCccC-CCCchHHHHHHHhcCceEEEEEeeeccCCCccCCCCCCcc
Q 013012 83 TVPEDVGTAGALRAIAHHL------TAKDVLVVSGDLVS-DVPPGAVTAAHRRHDAVVTAMICSVPVSGLSEAGSSGAKD 155 (451)
Q Consensus 83 ~~~~~~gt~~~l~~~~~~l------~~~~~lvl~~D~i~-~~~~~~~l~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~ 155 (451)
.++...||+++++.+.+.+ .+++|+|++||.++ +.++..+ ..+++.++++...+
T Consensus 80 ~~~~~~Gt~~av~~a~~~l~~~~~~~~~~~lV~~gD~l~~~~~~~~~-----~~~~~~~i~~~~~~-------------- 140 (255)
T 4evw_A 80 LHTETRGQAETVTLGLEELAKQGVDYQGSITVFNIDTFRPNFVFPDI-----SQHSDGYLEVFQGG-------------- 140 (255)
T ss_dssp ESSCCSSHHHHHHHHHHHHHHTTCCCCSCEEECCTTEECTTCCCCGG-----GGSSSEEEEEEECC--------------
T ss_pred eCCCCCCHHHHHHHHHHHHhhcccCCCCcEEEEeCCEEEecchhHHH-----hhcCCcEEEEEecC--------------
Confidence 5677899999999998887 35679999999666 5666653 24556777776542
Q ss_pred cCCCCCcccEEEecCCC--ceEEEeeccccccccccccHHHHhhcCeeEEecCCccceEEeechH
Q 013012 156 KTKKPGRYNIIGMDPTK--QFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAHMYAFNRS 218 (451)
Q Consensus 156 ~~~~~~~~~~v~~d~~~--~~l~~~~~~~~~ek~~~i~~~~~~~~~~~~~~s~l~~~giYi~~~~ 218 (451)
.+ +||++..|+++ + +..+. ||+. .++++++|+|+|++.
T Consensus 141 ---~p-~yG~v~~d~~g~~~-V~~i~-----EK~~---------------~s~~~~~GiY~f~~~ 180 (255)
T 4evw_A 141 ---GD-NWSFAKPEHAGSTK-VIQTA-----EKNP---------------ISDLCSTGLYHFNRK 180 (255)
T ss_dssp ---SS-CSCEEEESSTTCCB-EEEEE-----SSSC---------------SSSEEEEEEEEESCH
T ss_pred ---CC-ceeEEEECCCCCeE-EEEEE-----eccC---------------ccCcEEEeEEEECcH
Confidence 13 78999999876 5 44554 3421 257899999999986
No 19
>2qh5_A PMI, ALGA, mannose-6-phosphate isomerase; structural genomics, PSI, protein structure initi nysgrc; 2.30A {Helicobacter pylori}
Probab=99.93 E-value=1.9e-25 Score=213.60 Aligned_cols=190 Identities=16% Similarity=0.202 Sum_probs=125.9
Q ss_pred CCceEEEEecCCCCCCCCCCCC-CCccccccc-CCcchHHHHHHHHHHCCCcEEEEEecCchhhHHHHHhhhhhccCce-
Q 013012 1 MDFQVVVLAGGTSKKLVPLVSK-EVPKALLPV-ANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRL- 77 (451)
Q Consensus 1 m~~~avIlAgG~g~Rl~pl~~~-~~pK~llpv-~gkpli~~~l~~l~~~gi~~iivv~~~~~~~~~i~~~~~~~~~~~~- 77 (451)
|+|+|||||||.|+||+|+ +. ..||+|+|+ +|+|||+|+++++.++ +++++|++++.. .+.+.+++.+.+ ..
T Consensus 3 ~~~~avIlAgG~gtRl~pl-t~~~~pK~ll~i~gg~pli~~~l~~l~~~-~~~i~vv~~~~~-~~~i~~~~~~~~--~~~ 77 (308)
T 2qh5_A 3 LKIKNILLSGGSGKRLWPL-SRSLYPKQFLKLFDHKSLFELSFKRNASL-VDETLIVCNEKH-YFLALEEIKNEI--KNK 77 (308)
T ss_dssp CCEEEEEECC--------------CCGGGCTTBTTBCHHHHHHHHHHTT-CSEEEEEEEGGG-HHHHHHHTTTTC--SSC
T ss_pred CccEEEEEcCCCCccCCcc-CCCCCCCEEEECCCCCCHHHHHHHHHHcc-CCCEEEEEChhH-HHHHHHHHHHhh--CCC
Confidence 4689999999999999999 64 799999999 5999999999999999 999999998542 235666665411 11
Q ss_pred eeEEEEcCCCCChHHHHHHHHhcCCCCc-EEEEcCCccC-CCC-chHHHHH---HHhcCceEEEEEeeeccCCCccCCCC
Q 013012 78 HVEVATVPEDVGTAGALRAIAHHLTAKD-VLVVSGDLVS-DVP-PGAVTAA---HRRHDAVVTAMICSVPVSGLSEAGSS 151 (451)
Q Consensus 78 ~~~i~~~~~~~gt~~~l~~~~~~l~~~~-~lvl~~D~i~-~~~-~~~~l~~---~~~~~~~~t~~~~~~~~~~~~~~~~~ 151 (451)
.+.++.++...||+++++.++..+..++ ++|++||.++ +.+ +.++++. |.+.++.+|+.+.+..
T Consensus 78 ~~~~i~~~~~~gt~~al~~a~~~l~~~~~~lv~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~---------- 147 (308)
T 2qh5_A 78 SVGFLLESLSKNTANAIALSALMSDKEDLLIVTPSDHLIKDLQAYENAIKKAIDLAQKGFLVTFGVSIDK---------- 147 (308)
T ss_dssp EEEEEEESSCCCHHHHHHHHHHTSCTTSEEEEEESSCBCCCHHHHHHHHHHHHHHHHTTCEEEEEEECSS----------
T ss_pred ccEEEeCCCCCChHHHHHHHHHHhCCCCeEEEEcCCccccCHHHHHHHHHHHHHHHhcCCEEEEEEecCC----------
Confidence 3456667778999999999988885454 9999999766 555 8899887 6666777777765432
Q ss_pred CCcccCCCCCcccEEEecCCCceEEEeeccccccccccc-cHHHHhhcCeeEEecCCccceEEeechHHHHHHH
Q 013012 152 GAKDKTKKPGRYNIIGMDPTKQFLLHIATGAELEKDTRI-RKSILRAVGQMDIRADLMDAHMYAFNRSVLQEVL 224 (451)
Q Consensus 152 ~~~~~~~~~~~~~~v~~d~~~~~l~~~~~~~~~ek~~~i-~~~~~~~~~~~~~~s~l~~~giYi~~~~~l~~~~ 224 (451)
.+..||++..|++++++ .+. ||+..- .+..+. . .+.++++|+|+|++++|...+
T Consensus 148 -------~~~~~g~i~~d~~~~V~-~~~-----Ekp~~~~~~~~~~-~-----g~~~~n~Giy~~~~~~ll~~l 202 (308)
T 2qh5_A 148 -------PNTEFGYIESPNGLDVK-RFI-----EKPSLDKAIEFQK-S-----GGFYFNSGMFVFQAGVFLDEL 202 (308)
T ss_dssp -------CCTTSEEEECSSSSBCS-EEE-----ESCCHHHHHHHHH-H-----CCEEEEEEEEEEEHHHHHHHH
T ss_pred -------CCCCceEEEECCCCEEE-EEE-----ECCChHHHHHHhh-c-----CCeEEEeEEEEEEHHHHHHHH
Confidence 13568988887666543 343 333210 111111 0 135889999999999864333
No 20
>3oam_A 3-deoxy-manno-octulosonate cytidylyltransferase; center for structural genomics of infectious diseases; 1.75A {Vibrio cholerae o1 biovar el tor} SCOP: c.68.1.13
Probab=99.91 E-value=6.5e-24 Score=197.03 Aligned_cols=191 Identities=19% Similarity=0.232 Sum_probs=134.3
Q ss_pred CCceEEEEecCCCCCCCCCCCCCCcccccccCCcchHHHHHHHHHHCCCcEEEEEecCchhhHHHHHhhhhhccCceeeE
Q 013012 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVE 80 (451)
Q Consensus 1 m~~~avIlAgG~g~Rl~pl~~~~~pK~llpv~gkpli~~~l~~l~~~gi~~iivv~~~~~~~~~i~~~~~~~~~~~~~~~ 80 (451)
|++.|||||||.|+|| . ||+|+|++|||||+|+++.+.++|+++|+|+++. +.+.+++.++ +++
T Consensus 1 M~~~aiIlA~G~stRl----p---~K~L~~i~GkPli~~~l~~l~~~~~~~ivVv~~~----~~i~~~~~~~-----g~~ 64 (252)
T 3oam_A 1 MSFTVVIPARYQSTRL----P---GKPLADIGGKPMIQWVYEQAMQAGADRVIIATDD----ERVEQAVQAF-----GGV 64 (252)
T ss_dssp CCEEEEEECCCCCSSS----T---TGGGCEETTEEHHHHHHHHHHHTTCSEEEEEESC----HHHHHHHHHT-----TCE
T ss_pred CceEEEEecCcCCCCC----C---CcceeeECCEEHHHHHHHHHHhCCCCeEEEECCH----HHHHHHHHHc-----CCE
Confidence 8999999999999999 2 7999999999999999999999999999999862 3566666542 244
Q ss_pred EEE--cCCCCChHHHHHHHHhcC---CCCcEEEEcCC--ccCCCCchHHHHHHHhcCceEEEEEeeeccCCCccCCCCCC
Q 013012 81 VAT--VPEDVGTAGALRAIAHHL---TAKDVLVVSGD--LVSDVPPGAVTAAHRRHDAVVTAMICSVPVSGLSEAGSSGA 153 (451)
Q Consensus 81 i~~--~~~~~gt~~~l~~~~~~l---~~~~~lvl~~D--~i~~~~~~~~l~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~ 153 (451)
++. ++...||++ +..+++.+ ..+.+++++|| ++...++..+++.|.+.++++++++.+.. +|.++
T Consensus 65 v~~~~~~~~~Gt~~-~~~~~~~l~~~~~d~vlv~~gD~Pli~~~~i~~l~~~~~~~~~~~~~~~~~v~--~~~~~----- 136 (252)
T 3oam_A 65 VCMTSPNHQSGTER-LAEVVAKMAIPADHIVVNVQGDEPLIPPAIIRQVADNLAACSAPMATLAVEIE--DEAEV----- 136 (252)
T ss_dssp EEECCTTCCSHHHH-HHHHHHHTTCCTTSEEEECCTTCTTCCHHHHHHHHHHHHHSSCSEEEEEEEEC--CHHHH-----
T ss_pred EEEcCCCCCCcHHH-HHHHHHhcCcCCCCEEEEEeCCeeecCHHHHHHHHHHHHhcCCCEEEEeeecC--CHHHh-----
Confidence 444 445689988 55565555 34679999999 56778999999999888888888877653 22211
Q ss_pred cccCCCCCcccEEEecCCCceEEEeeccccccccccccHHHHhhcCeeEEecCCccceEEeechHHHHHHHhc
Q 013012 154 KDKTKKPGRYNIIGMDPTKQFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAHMYAFNRSVLQEVLDQ 226 (451)
Q Consensus 154 ~~~~~~~~~~~~v~~d~~~~~l~~~~~~~~~ek~~~i~~~~~~~~~~~~~~s~l~~~giYi~~~~~l~~~~~~ 226 (451)
..| +.+.|..|++++++.+.. ++..-.+............++++++|+|+|++++|..+...
T Consensus 137 ----~~p-~~g~vv~d~~g~v~~fsr------~~i~~~~~~~~~~~~~~~~~~~~n~GiY~~~~~~l~~~~~~ 198 (252)
T 3oam_A 137 ----FNP-NAVKVITDKSGYALYFSR------ATIPWDRDNFAKADKAIVQPLLRHIGIYAYRAGFINTYLDW 198 (252)
T ss_dssp ----TCT-TSCEEEECTTSBEEEEES------SCSSCCHHHHHSSSCCCCSCEEEEEEEEEEETTHHHHHHHS
T ss_pred ----hCC-CceEEEECCCCeEEEEeC------CCCCCCCCccccccccccccceEEEEEEEcCHHHHHHHHcC
Confidence 011 227889999888665542 21110111000000000134689999999999999887654
No 21
>2x65_A Mannose-1-phosphate guanylyltransferase; nucleotidyltransferase; HET: M1P; 2.10A {Thermotoga maritima} PDB: 2x5z_A* 2x60_A* 2x5s_A*
Probab=99.91 E-value=1.3e-23 Score=202.66 Aligned_cols=186 Identities=20% Similarity=0.238 Sum_probs=129.1
Q ss_pred ceEEEEecCCCCCCCCCCCCCCcccccccCC-cchHHHHHHHHHHC-CCcEEEEEecCchhhHHHHHhhhhhccCceeeE
Q 013012 3 FQVVVLAGGTSKKLVPLVSKEVPKALLPVAN-RPVLSYVLEQLELS-NIKDLIVVVEGADAALRVGGWISAAYVDRLHVE 80 (451)
Q Consensus 3 ~~avIlAgG~g~Rl~pl~~~~~pK~llpv~g-kpli~~~l~~l~~~-gi~~iivv~~~~~~~~~i~~~~~~~~~~~~~~~ 80 (451)
|++||||||.|+||+|||+...||+|+|++| +|||+|+++++..+ |+++++|++++.. ...+.+++.+. .. ..
T Consensus 2 m~~VILAgG~GtRl~Pls~~~~pK~ll~l~g~~pli~~~l~~l~~~~~~~~iivvt~~~~-~~~i~~~l~~~--~~--~~ 76 (336)
T 2x65_A 2 MKALILAGGSGERFWPLSTPETPKQFLKLFGNKSLMRWTFERVLEEMDPKDVIVVTHKDY-VERTKKELPEL--PD--EN 76 (336)
T ss_dssp CEEEEECCCBCGGGTTTSCTTCBGGGCCCBTTBCHHHHHHHHHHTTCCGGGEEEEEEGGG-HHHHHHHCTTS--CG--GG
T ss_pred eEEEEECCCCCccCCCCcCCCCCceEEECCCCCcHHHHHHHHHhccCCCCcEEEEcChHH-HHHHHHHhhcc--cc--ce
Confidence 7899999999999999944789999999999 99999999999996 8999999998542 23455655432 11 24
Q ss_pred EEEcCCCCChHHHHHHHHhcCC-CCcEEEEcCCccCCC--Cc----hHHHHHHHhcCceEEEEEeeeccCCCccCCCCCC
Q 013012 81 VATVPEDVGTAGALRAIAHHLT-AKDVLVVSGDLVSDV--PP----GAVTAAHRRHDAVVTAMICSVPVSGLSEAGSSGA 153 (451)
Q Consensus 81 i~~~~~~~gt~~~l~~~~~~l~-~~~~lvl~~D~i~~~--~~----~~~l~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~ 153 (451)
++.++...||+++++.+...+. ++.++|++||.+... ++ ..+++.|++.++.+|+.+.+..
T Consensus 77 ii~e~~~~gta~ai~~a~~~~~~~~~~lvl~~D~~~~~~~~~~~~l~~~~~~~~~~~~~vt~~i~p~~------------ 144 (336)
T 2x65_A 77 IIAEPMKKNTAPACFIGTKLADDDEPVLVLPADHRIPDTKKFWKTVKKALDALEKYDGLFTFGIVPTR------------ 144 (336)
T ss_dssp EEEESSCCCHHHHHHHHHTTSCTTCEEEEEETTCBCCCHHHHHHHHHHHHHHHHHHCSEEEEEECCCS------------
T ss_pred EEeCCCCCCcHHHHHHHHHhhCCCCEEEEEcCCceeccHHHHHHHHHHHHHHHHhcCCeEEEEeeccc------------
Confidence 5667778999999998877664 345999999966543 44 4445557665676776654321
Q ss_pred cccCCCCCcccEEEecCC----CceEEEeecccccccccccc-HHHHhhcCeeEEecCCccceEEeechHHHH
Q 013012 154 KDKTKKPGRYNIIGMDPT----KQFLLHIATGAELEKDTRIR-KSILRAVGQMDIRADLMDAHMYAFNRSVLQ 221 (451)
Q Consensus 154 ~~~~~~~~~~~~v~~d~~----~~~l~~~~~~~~~ek~~~i~-~~~~~~~~~~~~~s~l~~~giYi~~~~~l~ 221 (451)
..++||++..|++ ...+..+. ||+..-+ +..+. .+ ..++|+|+|+|++++|.
T Consensus 145 -----~~~~yG~I~~~~~~~~~~~~V~~f~-----EKp~~~~a~~~~~-~g-----~y~~n~Giy~~~~~~ll 201 (336)
T 2x65_A 145 -----PETGYGYIEIGEELEEGVHKVAQFR-----EKPDLETAKKFVE-SG-----RFLWNSGMFLWKAREFI 201 (336)
T ss_dssp -----CCSSSEEEEEEEEEETTEEEEEEEE-----ESCCHHHHHHHHH-HT-----CEEEEEEEEEEEHHHHH
T ss_pred -----CCCCceEEEECCccCCCccEEEEEE-----ECCChHHHHHHHh-cC-----CeEEEeeeEEEEHHHHH
Confidence 1357898887653 12345554 3432111 11111 11 24899999999999873
No 22
>2cu2_A Putative mannose-1-phosphate guanylyl transferase; mannose-1-phosphate geranyltransferase, thermus thermophilus structural genomics; 2.20A {Thermus thermophilus} SCOP: b.81.4.1 c.68.1.20
Probab=99.89 E-value=6.1e-23 Score=198.02 Aligned_cols=181 Identities=20% Similarity=0.248 Sum_probs=124.7
Q ss_pred CCceEEEEecCCCCCCCCCCCCCCcccccccCC-cchHHHHHHHHHHC-CCcEEEEEecCchhhHHHHHhhhhhccCcee
Q 013012 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVAN-RPVLSYVLEQLELS-NIKDLIVVVEGADAALRVGGWISAAYVDRLH 78 (451)
Q Consensus 1 m~~~avIlAgG~g~Rl~pl~~~~~pK~llpv~g-kpli~~~l~~l~~~-gi~~iivv~~~~~~~~~i~~~~~~~~~~~~~ 78 (451)
|+|.+||||||.|+||+|+|....||+|+|++| +|||+|+++++..+ ++++++|++++.. ...+.+++.+ ..
T Consensus 1 M~m~~VILAgG~GtRl~Pls~~~~pK~ll~l~G~~pli~~~l~~l~~~~~~~~iiVvt~~~~-~~~i~~~l~~-----~~ 74 (337)
T 2cu2_A 1 MKTYALVMAGGRGERLWPLSREDRPKPFLPLFEGKTLLEATLERLAPLVPPERTLLAVRRDQ-EAVARPYADG-----IR 74 (337)
T ss_dssp CCEEEEEECCCCCGGGTTTCBTTBCGGGCBCGGGCBHHHHHHHHHTTTSCGGGEEEEEEGGG-HHHHGGGCSS-----SE
T ss_pred CCeEEEEEcCCCcccCCccCCCCCCceEEEcCCCChHHHHHHHHHhCcCCCCCEEEEcChHH-HHHHHHHhcc-----Cc
Confidence 889999999999999999933689999999999 99999999999988 8999999998532 2344444432 12
Q ss_pred eEEEEcCCCCChHHHHHHHHhcC----CCCcEEEEcCCccCCC--CchHHH----HHHHhcCceEEEEEeeeccCCCccC
Q 013012 79 VEVATVPEDVGTAGALRAIAHHL----TAKDVLVVSGDLVSDV--PPGAVT----AAHRRHDAVVTAMICSVPVSGLSEA 148 (451)
Q Consensus 79 ~~i~~~~~~~gt~~~l~~~~~~l----~~~~~lvl~~D~i~~~--~~~~~l----~~~~~~~~~~t~~~~~~~~~~~~~~ 148 (451)
. +.++...||+.++..+.. + .++.++|++||.+... .+..++ +.|++ ++.+|+.+.+..
T Consensus 75 ~--i~e~~~~gta~ai~~a~~-l~~~~~~~~~lvl~~D~~~~~~~~~~~~l~~~~~~~~~-~~~vt~~i~p~~------- 143 (337)
T 2cu2_A 75 L--LLEPLGRDTAGAVLLGVA-EALKEGAERLLVLPADHYVGDDEAYREALATMLEAAEE-GFVVALGLRPTR------- 143 (337)
T ss_dssp E--EEESSCCHHHHHHHHHHH-HHHHHTCSEEEEEESSCEESCHHHHHHHHHHHHHHCCT-TCEEEEEECCSS-------
T ss_pred e--EecCCCCCcHHHHHHHHH-HhccCCCCEEEEEECCccCCCHHHHHHHHHHHHHHHHc-CCeEEEeeccCC-------
Confidence 2 445677899999988765 3 2456999999965432 444444 34444 566666654321
Q ss_pred CCCCCcccCCCCCcccEEEecCC---CceEEEeeccccccccccc-cHHHHhhcCeeEEec-CCccceEEeechHHHH
Q 013012 149 GSSGAKDKTKKPGRYNIIGMDPT---KQFLLHIATGAELEKDTRI-RKSILRAVGQMDIRA-DLMDAHMYAFNRSVLQ 221 (451)
Q Consensus 149 ~~~~~~~~~~~~~~~~~v~~d~~---~~~l~~~~~~~~~ek~~~i-~~~~~~~~~~~~~~s-~l~~~giYi~~~~~l~ 221 (451)
.+++||++..|++ ...+..+. ||+..- .+..+ .+ .++|+|+|+|++++|.
T Consensus 144 ----------~~t~yG~I~~~~~~~~~~~V~~f~-----EKp~~~~a~~~~--------~~g~~~n~Giy~f~~~~ll 198 (337)
T 2cu2_A 144 ----------PETEYGYIRLGPREGAWYRGEGFV-----EKPSYAEALEYI--------RKGYVWNGGVFAFAPATMA 198 (337)
T ss_dssp ----------CCSSSCEEEEEEEETTEEEEEEEE-----CCCCHHHHHHHH--------HTTCEEEEEEEEECHHHHH
T ss_pred ----------CCCCceEEEECCcccccCeEEEEE-----eCCChHHHHHHh--------hcCCEEEEEEEEEeHHHHH
Confidence 1357899887754 12344554 343211 11111 12 5899999999999873
No 23
>1jyk_A LICC protein, CTP:phosphocholine cytidylytransferase; 3D structure, CTP:phosphocholine cytidylyltransferase; 1.50A {Streptococcus pneumoniae} SCOP: c.68.1.13 PDB: 1jyl_A*
Probab=99.89 E-value=1.2e-22 Score=188.76 Aligned_cols=167 Identities=16% Similarity=0.242 Sum_probs=116.1
Q ss_pred CCceEEEEecCCCCCCCCCCCCCCcccccccCCcchHHHHHHHHHHCCCcEEEEEecCchhhHHHHHhhhhhccCceeeE
Q 013012 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVE 80 (451)
Q Consensus 1 m~~~avIlAgG~g~Rl~pl~~~~~pK~llpv~gkpli~~~l~~l~~~gi~~iivv~~~~~~~~~i~~~~~~~~~~~~~~~ 80 (451)
|++.|||||||.|+||+|+ |...||+|+|++|+|||+|+++++.++|+++++|++++.. +.+..+... +++.
T Consensus 24 ~~~~aiIlAaG~gtRl~pl-t~~~pK~l~~i~gkpli~~~l~~l~~~g~~~i~vv~~~~~--~~i~~~~~~-----~~~~ 95 (254)
T 1jyk_A 24 IRVKAIILAAGLGTRLRPL-TENTPKALVQVNQKPLIEYQIEFLKEKGINDIIIIVGYLK--EQFDYLKEK-----YGVR 95 (254)
T ss_dssp CCCEEEEEECSCCGGGTTT-TSSSCGGGCEETTEEHHHHHHHHHHHTTCCCEEEEECTTG--GGGTHHHHH-----HCCE
T ss_pred cCceEEEECCCCcccCCcc-cCCCCCEEeeECCEEHHHHHHHHHHHCCCCeEEEEeCCcH--HHHHHHHHh-----CCcE
Confidence 4689999999999999999 8999999999999999999999999999999999998542 244443322 2356
Q ss_pred EEEcCC--CCChHHHHHHHHhcCCCCcEEEEcCCccCCCC-chHHHHHHHhcCceEEEEEeeeccCCCccCCCCCCcccC
Q 013012 81 VATVPE--DVGTAGALRAIAHHLTAKDVLVVSGDLVSDVP-PGAVTAAHRRHDAVVTAMICSVPVSGLSEAGSSGAKDKT 157 (451)
Q Consensus 81 i~~~~~--~~gt~~~l~~~~~~l~~~~~lvl~~D~i~~~~-~~~~l~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~ 157 (451)
++..++ ..|++++++.+++.+. +++|++||.++..+ +..++ +.++.+++. . .++
T Consensus 96 iv~~~~~~~~g~~~al~~a~~~~~--~~lv~~~D~~~~~~~~~~~~----~~~~~~t~~---~--~~~------------ 152 (254)
T 1jyk_A 96 LVFNDKYADYNNFYSLYLVKEELA--NSYVIDADNYLFKNMFRNDL----TRSTYFSVY---R--EDC------------ 152 (254)
T ss_dssp EEECTTTTTSCTHHHHHTTGGGCT--TEEEEETTEEESSCCCCSCC----CSEEEEECE---E--SSC------------
T ss_pred EEECCCccCCCcHHHHHHHHHHCC--CEEEEeCCcccCHHHHHHHH----hCCceEEEE---c--ccC------------
Confidence 666554 4799999999988873 58999999544333 33322 222222221 1 111
Q ss_pred CCCCcccEEEecCCCceEEEeeccccccccccccHHHHhhcCeeEEecCCccceEEeechHHHHHH
Q 013012 158 KKPGRYNIIGMDPTKQFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAHMYAFNRSVLQEV 223 (451)
Q Consensus 158 ~~~~~~~~v~~d~~~~~l~~~~~~~~~ek~~~i~~~~~~~~~~~~~~s~l~~~giYi~~~~~l~~~ 223 (451)
...|+++ +|++++++ .+. |++ .+.++++|+|+|+++.+..+
T Consensus 153 --~~~~~v~-~d~~g~v~-~~~-----e~~----------------~~~~~~~Giy~~~~~~~~~l 193 (254)
T 1jyk_A 153 --TNEWFLV-YGDDYKVQ-DII-----VDS----------------KAGRILSGVSFWDAPTAEKI 193 (254)
T ss_dssp --SSCCEEE-ECTTCBEE-EEE-----CCC----------------SSEEBCCSEEEECHHHHHHH
T ss_pred --CCCeEEE-ECCCCeEE-EEE-----ECC----------------CCCcEEEEEEEEcHHHHHHH
Confidence 1246654 78777654 443 221 12478999999999765443
No 24
>3k8d_A 3-deoxy-manno-octulosonate cytidylyltransferase; KDSB synthetase KDO complex, lipopolysaccharide biosynthesis magnesium, nucleotidyltransferase; HET: KDO CTP; 1.90A {Escherichia coli} SCOP: c.68.1.13 PDB: 3k8e_C 1vh1_A 3jtj_A*
Probab=99.87 E-value=1.9e-21 Score=180.64 Aligned_cols=190 Identities=18% Similarity=0.230 Sum_probs=131.0
Q ss_pred CCceEEEEecCCCCCCCCCCCCCCcccccccCCcchHHHHHHHHHHCCCcEEEEEecCchhhHHHHHhhhhhccCceeeE
Q 013012 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVE 80 (451)
Q Consensus 1 m~~~avIlAgG~g~Rl~pl~~~~~pK~llpv~gkpli~~~l~~l~~~gi~~iivv~~~~~~~~~i~~~~~~~~~~~~~~~ 80 (451)
|++.|||||||.|+|| . +|+|+|++|||||+|+++++.++|+++|+|++.. +.+.+++..+ +++
T Consensus 17 M~~~aIIlA~G~stRl----p---~K~L~~i~GkPmi~~~l~~l~~~~i~~IvV~t~~----~~i~~~~~~~-----g~~ 80 (264)
T 3k8d_A 17 MSFVVIIPARYASTRL----P---GKPLVDINGKPMIVHVLERARESGAERIIVATDH----EDVARAVEAA-----GGE 80 (264)
T ss_dssp -CCEEEEECCSCCSSS----T---TGGGCEETTEEHHHHHHHHHHHTTCSEEEEEESC----HHHHHHHHHT-----TCE
T ss_pred CceEEEEEcCCCCCCC----C---CcceeeECCeEHHHHHHHHHHhCCCCEEEEECCH----HHHHHHHHHc-----CCE
Confidence 7889999999999999 2 6999999999999999999999999999999852 3566655432 244
Q ss_pred EEE--cCCCCChHHHHHHHHhcC---CCCcEEEEcCC--ccCCCCchHHHHHHHhcCceEEEEEeeeccCCCccCCCCCC
Q 013012 81 VAT--VPEDVGTAGALRAIAHHL---TAKDVLVVSGD--LVSDVPPGAVTAAHRRHDAVVTAMICSVPVSGLSEAGSSGA 153 (451)
Q Consensus 81 i~~--~~~~~gt~~~l~~~~~~l---~~~~~lvl~~D--~i~~~~~~~~l~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~ 153 (451)
++. .+...||+. ++.+.+.+ ..+.++++.|| ++...+++.+++.+.+.++++++++.+.. ++.+.
T Consensus 81 v~~~~~~~~~Gt~~-i~~~~~~l~~~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~~~~~~~~~~~v~--d~~~~----- 152 (264)
T 3k8d_A 81 VCMTRADHQSGTER-LAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQVGMATLAVPIH--NAEEA----- 152 (264)
T ss_dssp EEECCTTCCSHHHH-HHHHHHHHTCCTTCEEEEECTTCTTCCHHHHHHHHHHHHTSSCSEEEEEEECC--SHHHH-----
T ss_pred EEEecCCCCCCHHH-HHHHHHHhccCCCCEEEEEcCCcccCCHHHHHHHHHHHhhcCCCEEEEEEEcC--CHHHc-----
Confidence 544 445678876 66666655 34679999999 57778999999999888888888877643 22221
Q ss_pred cccCCCCCcccEEEecCCCceEEEeeccccccccccccHHHHhhcCeeEEecCCccceEEeechHHHHHHHh
Q 013012 154 KDKTKKPGRYNIIGMDPTKQFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAHMYAFNRSVLQEVLD 225 (451)
Q Consensus 154 ~~~~~~~~~~~~v~~d~~~~~l~~~~~~~~~ek~~~i~~~~~~~~~~~~~~s~l~~~giYi~~~~~l~~~~~ 225 (451)
.+++.+. |++|++++.+.+. +++..-++..+.........+++.++|+|+|++++|..+..
T Consensus 153 ----~~p~~vk-Vv~d~~g~~l~fs------r~~ip~~r~~~~~~~~~~~~~~~~~~GiY~y~~~~l~~~~~ 213 (264)
T 3k8d_A 153 ----FNPNAVK-VVLDAEGYALYFS------RATIPWDRDRFAEGLETVGDNFLRHLGIYGYRAGFIRRYVN 213 (264)
T ss_dssp ----TCTTSCE-EEECTTSBEEEEE------SSCCSCCHHHHHHCSSCCCSCCEEECSEEEEEHHHHHHHHH
T ss_pred ----cCCCceE-EEECCCCeEEEEe------cCCCCCCCccccccccccCCcceEEEEEEEECHHHHHHHHh
Confidence 1233333 5678888866554 23221111111000000112468899999999999988754
No 25
>3tqd_A 3-deoxy-manno-octulosonate cytidylyltransferase; cell envelope; 1.80A {Coxiella burnetii} SCOP: c.68.1.0
Probab=99.86 E-value=5.3e-21 Score=176.88 Aligned_cols=191 Identities=17% Similarity=0.239 Sum_probs=124.6
Q ss_pred CCceEEEEecCCCCCCCCCCCCCCcccccccCCcchHHHHHHHHHHCCCcEEEEEecCchhhHHHHHhhhhhccCceeeE
Q 013012 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVE 80 (451)
Q Consensus 1 m~~~avIlAgG~g~Rl~pl~~~~~pK~llpv~gkpli~~~l~~l~~~gi~~iivv~~~~~~~~~i~~~~~~~~~~~~~~~ 80 (451)
|++.|||||||.|+|| . ||+|+|++|||||+|+++.+.++|+++|+|+++. +.+.+++..+ +++
T Consensus 8 M~~~aIIlA~G~stRl----~---~K~L~~i~GkPli~~~l~~l~~~~i~~VvVvt~~----~~i~~~~~~~-----g~~ 71 (256)
T 3tqd_A 8 MEFRVIIPARFDSTRL----P---GKALVDIAGKPMIQHVYESAIKSGAEEVVIATDD----KRIRQVAEDF-----GAV 71 (256)
T ss_dssp -CCEEEEECCCC---C----T---TGGGCEETTEEHHHHHHHHHHHTTCSEEEEEESC----HHHHHHHHHT-----TCE
T ss_pred CCceEEEEcCCCCCCC----C---CCCeeeECCchHHHHHHHHHHhCCCCEEEEECCH----HHHHHHHHHc-----CCe
Confidence 6789999999999999 2 8999999999999999999999999999999863 3566665432 244
Q ss_pred EEE--cCCCCChHHHHHHHHhcC---CCCcEEEEcCC--ccCCCCchHHHHHHHhc-CceEEEEEeeeccCCCccCCCCC
Q 013012 81 VAT--VPEDVGTAGALRAIAHHL---TAKDVLVVSGD--LVSDVPPGAVTAAHRRH-DAVVTAMICSVPVSGLSEAGSSG 152 (451)
Q Consensus 81 i~~--~~~~~gt~~~l~~~~~~l---~~~~~lvl~~D--~i~~~~~~~~l~~~~~~-~~~~t~~~~~~~~~~~~~~~~~~ 152 (451)
++. .+...|+++ ++.+++.+ ..+.++++.|| ++....+..+++.+++. ++++++++.+.. ++.+
T Consensus 72 v~~~~~~~~~Gt~~-i~~a~~~l~~~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~~~~~~a~l~~~v~--~~~~----- 143 (256)
T 3tqd_A 72 VCMTSSDHQSGTER-IAEAAVALGFEDDEIIVCLQGDEPLIPPDAIRKLAEDLDEHDNVKVASLCTPIT--EVDE----- 143 (256)
T ss_dssp EEECCTTCCSHHHH-HHHHHHHTTCCTTCEEEEECTTCCCCCHHHHHHHHHHHHHCC--CEEEEEEECC--CHHH-----
T ss_pred EEEeCCCCCCcHHH-HHHHHHHhCcCCCCEEEEEeCCcccCCHHHHHHHHHHHHhCCCCCEEEEeeEcC--CHHH-----
Confidence 444 344578876 77777776 34679999999 46677899999999874 556666655432 2111
Q ss_pred CcccCCCCCcccEEEecCCCceEEEeeccccccccccccHHHHh-hcCeeEEecCCccceEEeechHHHHHHHhc
Q 013012 153 AKDKTKKPGRYNIIGMDPTKQFLLHIATGAELEKDTRIRKSILR-AVGQMDIRADLMDAHMYAFNRSVLQEVLDQ 226 (451)
Q Consensus 153 ~~~~~~~~~~~~~v~~d~~~~~l~~~~~~~~~ek~~~i~~~~~~-~~~~~~~~s~l~~~giYi~~~~~l~~~~~~ 226 (451)
..+++.++ |++|++++.+.+.. ++..-++..+. ........+++.+.|+|+|++++|+.+...
T Consensus 144 ----~~~p~~vk-vv~d~~g~~l~fsr------~pip~~r~~~~~~~~~~~~~~~~~~~GiY~y~~~~l~~~~~l 207 (256)
T 3tqd_A 144 ----LFNPHSTK-VVLNRRNYALYFSH------APIPWGRDTFSDKENLQLNGSHYRHVGIYAYRVGFLEEYLSW 207 (256)
T ss_dssp ----HTCTTSCE-EEECTTSBEEEEES------SCSSCCTTTTTCGGGCCCSSCCEEEEEEEEEEHHHHHHHHHS
T ss_pred ----hhCCCccE-EEECCCCEEeEEec------CCCCCCCcccccccccccCCcceEEEEEEEcCHHHHHHHHhC
Confidence 11244444 56888888665543 22111110000 000000124688999999999999887543
No 26
>4fcu_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.90A {Acinetobacter baumannii} PDB: 3pol_A
Probab=99.81 E-value=7.2e-19 Score=162.37 Aligned_cols=187 Identities=20% Similarity=0.250 Sum_probs=122.0
Q ss_pred ceEEEEecCCCCCCCCCCCCCCcccccccCCcchHHHHH-HHHHHCCCcEEEEEecCchhhHHHHHhhhhhccCceeeEE
Q 013012 3 FQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVL-EQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVEV 81 (451)
Q Consensus 3 ~~avIlAgG~g~Rl~pl~~~~~pK~llpv~gkpli~~~l-~~l~~~gi~~iivv~~~~~~~~~i~~~~~~~~~~~~~~~i 81 (451)
+.|||||||.|+|| .+|+|+|++|||||+|++ +.+.++++++|+|+++. +.+.+++..+ ++++
T Consensus 2 ~~aiIlA~G~stR~-------~~K~L~~i~GkPli~~~i~~~~~~~~~~~vvVvt~~----~~i~~~~~~~-----g~~v 65 (253)
T 4fcu_A 2 KHIVIPARFSSSRL-------PGKPLLLIHDRPMILRVVDQAKKVEGFDDLCVATDD----ERIAEICRAE-----GVDV 65 (253)
T ss_dssp EEEEEECCSCCTTS-------TTGGGSEETTEEHHHHHHHHHHTCTTCCEEEEEESC----HHHHHHHHTT-----TCCE
T ss_pred eEEEEEeCCCCCCC-------CCCceeeECCeEhHHHHHHHHHHhcCCCEEEEECCH----HHHHHHHHHc-----CCeE
Confidence 67999999999999 259999999999999999 99988899999999973 3555555432 2344
Q ss_pred EE--cCCCCChHHHHHHHHhcCC---CCcEEEEcCC--ccCCCCchHHHHHHHhc-CceEEEEEeeeccCCCccCCCCCC
Q 013012 82 AT--VPEDVGTAGALRAIAHHLT---AKDVLVVSGD--LVSDVPPGAVTAAHRRH-DAVVTAMICSVPVSGLSEAGSSGA 153 (451)
Q Consensus 82 ~~--~~~~~gt~~~l~~~~~~l~---~~~~lvl~~D--~i~~~~~~~~l~~~~~~-~~~~t~~~~~~~~~~~~~~~~~~~ 153 (451)
+. .+...|+ ++++.+++.+. .+.++++.|| ++....+..+++.|.+. ++.+..++.... ++.+
T Consensus 66 ~~~~~~~~~Gt-~~i~~a~~~~~~~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~~~~~~at~~~~~~--~~~~------ 136 (253)
T 4fcu_A 66 VLTSADHPSGT-DRLSEVARIKGWDADDIIVNVQGDEPLLPAQLVQQVAKLLVDKPNCSMSTLCEPIH--ALDE------ 136 (253)
T ss_dssp EECCTTCCCHH-HHHHHHHHHHTCCTTCEEEECCTTCTTCCHHHHHHHHHHHHHCTTCSEEEEEEECC--CHHH------
T ss_pred EEeCCCCCChH-HHHHHHHHhcCcCCCCEEEEEeCCcccCCHHHHHHHHHHHHhCCCCCEEEEeEEcC--CHHH------
Confidence 43 3345676 46777766653 3569999999 56778999999999876 334333333221 1100
Q ss_pred cccCCCCCcccEEEecCCCceEEEeeccccccccccccHHHHhhcCeeEEecCCccceEEeechHHHHHHH
Q 013012 154 KDKTKKPGRYNIIGMDPTKQFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAHMYAFNRSVLQEVL 224 (451)
Q Consensus 154 ~~~~~~~~~~~~v~~d~~~~~l~~~~~~~~~ek~~~i~~~~~~~~~~~~~~s~l~~~giYi~~~~~l~~~~ 224 (451)
..+|+.++ |..|++++.+.+........++.. ...........+.++|+|+|++++|..+.
T Consensus 137 ---~~~p~~~k-vv~d~~g~~l~fsr~~ip~~r~~~------~~~~~~~~~~~~~~~GiY~f~~~~l~~~~ 197 (253)
T 4fcu_A 137 ---FQRDSIVK-VVMSKQNEALYFSRATIPYDRDGA------KRDEPTLHTQAFRHLGLYAYRVSLLQEYV 197 (253)
T ss_dssp ---HHCTTSCE-EEECTTSBEEEEESSCCSCCTTTS------SSSSCCCCSCCEEEEEEEEEEHHHHHHHT
T ss_pred ---ccCCCccE-EEECCCCeEEEecCCCCCCCCCcc------cccccccccceeEEEEEEEeCHHHHHHHH
Confidence 11344544 578888887665432111111100 00000001235679999999999998774
No 27
>2y6p_A 3-deoxy-manno-octulosonate cytidylyltransferase; lipid A; HET: CTP; 2.10A {Aquifex aeolicus}
Probab=99.81 E-value=1.5e-18 Score=159.22 Aligned_cols=178 Identities=19% Similarity=0.199 Sum_probs=117.6
Q ss_pred CCceEEEEecCCCCCCCCCCCCCCcccccccCCcchHHHHHHHHHHCCCcEEEEEecCchhhHHHHHhhhhhccCceeeE
Q 013012 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVE 80 (451)
Q Consensus 1 m~~~avIlAgG~g~Rl~pl~~~~~pK~llpv~gkpli~~~l~~l~~~gi~~iivv~~~~~~~~~i~~~~~~~~~~~~~~~ 80 (451)
|++.|||||||.|+|| . ||+|+|++|+|||+|+++++.++ +++++|++++ +.+.+++.++ +.
T Consensus 1 m~~~aiIlA~G~g~R~----~---~K~l~~i~g~pli~~~l~~~~~~-~~~i~v~~~~----~~i~~~~~~~------~~ 62 (234)
T 2y6p_A 1 MRRAVIIPARLGSTRL----K---EKPLKNLLGKPLIRWVVEGLVKT-GERVILATDS----ERVKEVVEDL------CE 62 (234)
T ss_dssp -CEEEEEECCSCCTTT----T---TGGGCEETTEEHHHHHHHHHHTT-TSCEEEEESC----HHHHHHHTTT------SE
T ss_pred CceEEEEEcCCCCCCC----C---CCcceeECCEEHHHHHHHHHHHh-CCEEEEECCh----HHHHHHHHhc------eE
Confidence 8899999999999999 3 99999999999999999999999 9999999974 2455555431 34
Q ss_pred EEEcC--CCCChHHHHHHHHhcCCCCcEEEEcCCc-cCC-CCchHHHHHHHhcCceEEEEEeeeccCCCccCCCCCCccc
Q 013012 81 VATVP--EDVGTAGALRAIAHHLTAKDVLVVSGDL-VSD-VPPGAVTAAHRRHDAVVTAMICSVPVSGLSEAGSSGAKDK 156 (451)
Q Consensus 81 i~~~~--~~~gt~~~l~~~~~~l~~~~~lvl~~D~-i~~-~~~~~~l~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~ 156 (451)
++..+ ...|+++++ .+++.+..+.+++++||. +.+ .++..+++.|.+.++.++++..... +
T Consensus 63 ~~~~~~~~~~g~~~~~-~~~~~~~~~~vlv~~~D~P~~~~~~i~~l~~~~~~~~~~~~~~~~~~~--~------------ 127 (234)
T 2y6p_A 63 VFLTPSDLPSGSDRVL-YVVRDLDVDLIINYQGDEPFVYEEDIKLIFRELEKGERVVTLARKDKE--A------------ 127 (234)
T ss_dssp EEECCTTCCSHHHHHH-HHHTTCCCSEEEECCTTCCCCCHHHHHHHHHHHHHTCSEEEEEEECSG--G------------
T ss_pred EEECCcccccchHHHH-HHHHhCCCCEEEEecCCcCcCCHHHHHHHHHHHHhCCCeEEEecCCHH--H------------
Confidence 44433 356788766 566666556799999995 555 7899999999877654544433110 0
Q ss_pred CCCCCcccEEEecCCCceEEEeeccccccccccccHHHHhhcCeeEEecCCccceEEeechHHHHHHHh
Q 013012 157 TKKPGRYNIIGMDPTKQFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAHMYAFNRSVLQEVLD 225 (451)
Q Consensus 157 ~~~~~~~~~v~~d~~~~~l~~~~~~~~~ek~~~i~~~~~~~~~~~~~~s~l~~~giYi~~~~~l~~~~~ 225 (451)
...+..++ +..|+++++ ..+.+ |+....+. .. . .+.+.++|+|+|++++|..+..
T Consensus 128 ~~~~~~~~-~~~~~~g~v-~~~~e-----~~~~~~~~----~~--~-~~~~~~~giy~~~~~~l~~~~~ 182 (234)
T 2y6p_A 128 YERPEDVK-VVLDREGYA-LYFSR-----SPIPYFRK----ND--T-FYPLKHVGIYGFRKETLMEFGA 182 (234)
T ss_dssp GGCTTSCE-EEECTTSBE-EEEES-----SCCSCCSS----CC--S-SCCEEEEEEEEEEHHHHHHHHH
T ss_pred hcCCCceE-EEEcCCCCE-eeeec-----CCCCcccc----cc--c-ceeeEEEEEEEcCHHHHHHHHh
Confidence 01133334 345666654 34432 21100000 00 0 0246799999999999876643
No 28
>1h7e_A 3-deoxy-manno-octulosonate cytidylyltransferase; nucleotidyltransferase, CMP-KDO synthetase, nucleoside monophosphate glycosides; 1.83A {Escherichia coli} SCOP: c.68.1.13 PDB: 1gqc_A* 1gq9_A 1h6j_A 1h7f_A* 1h7g_A* 1h7h_A* 1h7t_A*
Probab=99.78 E-value=6.7e-18 Score=155.94 Aligned_cols=123 Identities=18% Similarity=0.222 Sum_probs=94.5
Q ss_pred CCceEEEEecCCCCCCCCCCCCCCcccccccCCcchHHHHHHHHHHCCC-cEEEEEecCchhhHHHHHhhhhhccCceee
Q 013012 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNI-KDLIVVVEGADAALRVGGWISAAYVDRLHV 79 (451)
Q Consensus 1 m~~~avIlAgG~g~Rl~pl~~~~~pK~llpv~gkpli~~~l~~l~~~gi-~~iivv~~~~~~~~~i~~~~~~~~~~~~~~ 79 (451)
|++.|||||||.|+|| . ||+|+|++|+|||+|+++.+.++++ ++++|++++ +.+.+++.+. ++
T Consensus 1 m~~~aiIlA~G~~~R~----~---~K~l~~i~g~pli~~~i~~~~~~~~~~~ivvv~~~----~~i~~~~~~~-----~~ 64 (245)
T 1h7e_A 1 SKAVIVIPARYGSSRL----P---GKPLLDIVGKPMIQHVYERALQVAGVAEVWVATDD----PRVEQAVQAF-----GG 64 (245)
T ss_dssp CCEEEEEECCSCCSSS----T---TGGGCEETTEEHHHHHHHHHHTCTTCCEEEEEESC----HHHHHHHHHT-----TC
T ss_pred CCeEEEEEcCCcCCCC----C---CCcccccCCchHHHHHHHHHHhCCCCCeEEEECCc----HHHHHHHHHc-----CC
Confidence 8899999999999999 2 9999999999999999999999996 999999974 2455555432 35
Q ss_pred EEEEc--CCCCChHHHHHHHHhcCCCCcEEEEcCC--ccCCCCchHHHHHHHhc-CceEEEEEeee
Q 013012 80 EVATV--PEDVGTAGALRAIAHHLTAKDVLVVSGD--LVSDVPPGAVTAAHRRH-DAVVTAMICSV 140 (451)
Q Consensus 80 ~i~~~--~~~~gt~~~l~~~~~~l~~~~~lvl~~D--~i~~~~~~~~l~~~~~~-~~~~t~~~~~~ 140 (451)
.++.. +...|+++++ .+++.+..+.+++++|| ++...++..+++.|.+. ++++++++.+.
T Consensus 65 ~~~~~~~~~~~g~~~~~-~~~~~~~~~~~lv~~~D~P~~~~~~i~~l~~~~~~~~~~~~~~~~~~~ 129 (245)
T 1h7e_A 65 KAIMTRNDHESGTDRLV-EVMHKVEADIYINLQGDEPMIRPRDVETLLQGMRDDPALPVATLCHAI 129 (245)
T ss_dssp EEEECCSCCSSHHHHHH-HHHHHSCCSEEEECCTTCTTCCHHHHHHHHHHHHHCTTCCEEEEEEEE
T ss_pred eEEeCCCccCCcHHHHH-HHHHhCCCCEEEEEcCCcCcCCHHHHHHHHHHHHhCCCCCEEEEeecC
Confidence 55553 3346776554 55555555679999999 45667899999999887 67766665543
No 29
>1vic_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics; 1.80A {Haemophilus influenzae} SCOP: c.68.1.13 PDB: 1vh3_A 3duv_A*
Probab=99.78 E-value=5.5e-18 Score=158.14 Aligned_cols=189 Identities=17% Similarity=0.216 Sum_probs=119.7
Q ss_pred CCceEEEEecCCCCCCCCCCCCCCcccccccCCcchHHHHHHHHHHCCCcEEEEEecCchhhHHHHHhhhhhccCceeeE
Q 013012 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVE 80 (451)
Q Consensus 1 m~~~avIlAgG~g~Rl~pl~~~~~pK~llpv~gkpli~~~l~~l~~~gi~~iivv~~~~~~~~~i~~~~~~~~~~~~~~~ 80 (451)
|++.|||||||.|+|| . +|+|+|++|+|||+|+++.+.++++++|+|++++. .+.+++..+ ++.
T Consensus 1 m~~~aiIlA~G~g~R~----~---~K~l~~~~gkpli~~~l~~l~~~~~~~ivvv~~~~----~i~~~~~~~-----~~~ 64 (262)
T 1vic_A 1 MSFTVIIPARFASSRL----P---GKPLADIKGKPMIQHVFEKALQSGASRVIIATDNE----NVADVAKSF-----GAE 64 (262)
T ss_dssp -CCEEEEECCCCCSSS----T---TGGGCEETTEEHHHHHHHHHHHTTCSEEEEEESCH----HHHHHHHHT-----TCE
T ss_pred CCcEEEEEcCCCCCCC----C---CCccccCCCeEHHHHHHHHHHhCCCceEEEECCcH----HHHHHHHhc-----CCE
Confidence 8899999999999999 2 49999999999999999999999999999998742 455555431 345
Q ss_pred EEEcC--CCCChHHHHHHHHhcC---CCCcEEEEcCC--ccCCCCchHHHHHHHhcCceEEEEEeeeccCCCccCCCCCC
Q 013012 81 VATVP--EDVGTAGALRAIAHHL---TAKDVLVVSGD--LVSDVPPGAVTAAHRRHDAVVTAMICSVPVSGLSEAGSSGA 153 (451)
Q Consensus 81 i~~~~--~~~gt~~~l~~~~~~l---~~~~~lvl~~D--~i~~~~~~~~l~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~ 153 (451)
++..+ ...|++ .+..+.+.+ ..+.+++++|| ++...++..+++.+.+.++++++++.+.. ++.+.
T Consensus 65 ~~~~~~~~~~g~~-~~~~~~~~l~~~~~~~vlv~~~D~P~i~~~~i~~l~~~~~~~~~~~~~~~~~~~--~~~~~----- 136 (262)
T 1vic_A 65 VCMTSVNHNSGTE-RLAEVVEKLAIPDNEIIVNIQGDEPLIPPVIVRQVADNLAKFNVNMASLAVKIH--DAEEL----- 136 (262)
T ss_dssp EEECCCSSCCHHH-HHHHHHHHTTCCTTCEEEECCTTCTTCCHHHHHHHHHHHHHHTCSEEEEEEECC--CHHHH-----
T ss_pred EEECCccccCChH-HHHHHHHHhccCCCCEEEEEeCCcCccCHHHHHHHHHHHHhcCCCEEEEEEecC--CHHHh-----
Confidence 55543 345665 454555444 34569999999 46677899999999887777766655432 11000
Q ss_pred cccCCCCCcccEEEecCCCceEEEeeccccccccccccHHHHh----hcCeeEEecCCccceEEeechHHHHHHH
Q 013012 154 KDKTKKPGRYNIIGMDPTKQFLLHIATGAELEKDTRIRKSILR----AVGQMDIRADLMDAHMYAFNRSVLQEVL 224 (451)
Q Consensus 154 ~~~~~~~~~~~~v~~d~~~~~l~~~~~~~~~ek~~~i~~~~~~----~~~~~~~~s~l~~~giYi~~~~~l~~~~ 224 (451)
. ...+..+..|++++++.+.. +.....+.... +.....+...+.++|+|+|++++|..+.
T Consensus 137 ----~-~~~~~~~~~~~~g~v~~f~~------~~~~~~r~~~~~~~~~~~~~~p~~~~~~~giy~~~~~~l~~~~ 200 (262)
T 1vic_A 137 ----F-NPNAVKVLTDKDGYVLYFSR------SVIPYDRDQFMNLQDVQKVQLSDAYLRHIGIYAYRAGFIKQYV 200 (262)
T ss_dssp ----T-CTTSCEEEECTTSBEEEEES------SCSSCCHHHHTTCSCGGGCCCCTTCEEEEEEEEEEHHHHHHHH
T ss_pred ----c-CCCceEEEECCCCCEeeeec------CCCCcCCccccccccccccccccceEEEEEEEEeeHHHHHHHH
Confidence 0 11233444566666544322 11100011100 0000011235789999999999887653
No 30
>2icy_A Probable UTP-glucose-1-phosphate uridylyltransferase 2; AT3G03250, UDP, putative UDP-glucose pyrophosphorylase; HET: UPG U5P; 1.64A {Arabidopsis thaliana} SCOP: b.81.1.4 c.68.1.5 PDB: 2icx_A* 1z90_A 2q4j_A
Probab=99.75 E-value=9.6e-17 Score=159.32 Aligned_cols=193 Identities=12% Similarity=0.116 Sum_probs=128.2
Q ss_pred CceEEEEecCCCCCCCCCCCCCCcccccccC-CcchHHHHHHHHHHC----CCc-EEEEEecCchhhHHHHHhhhhhccC
Q 013012 2 DFQVVVLAGGTSKKLVPLVSKEVPKALLPVA-NRPVLSYVLEQLELS----NIK-DLIVVVEGADAALRVGGWISAAYVD 75 (451)
Q Consensus 2 ~~~avIlAgG~g~Rl~pl~~~~~pK~llpv~-gkpli~~~l~~l~~~----gi~-~iivv~~~~~~~~~i~~~~~~~~~~ 75 (451)
++.+||||||.|||| +...||+|+|+. |+|+|++.++++.+. |+. .+++.+++.. .+.+++|+.++...
T Consensus 79 k~~vviLAGGlGTRL----g~~~PK~llpv~~gkp~Le~~i~~l~~~~~~~G~~ip~vimts~~t-~e~t~~~f~~~~~f 153 (469)
T 2icy_A 79 KLVVLKLNGGLGTTM----GCTGPKSVIEVRDGLTFLDLIVIQIENLNNKYGCKVPLVLMNSFNT-HDDTHKIVEKYTNS 153 (469)
T ss_dssp TEEEEEEECCBSGGG----TCCSBGGGSEEETTEEHHHHHHHHHHHHHHHHSCCCCEEEEECTTT-HHHHHHHHGGGTTS
T ss_pred cceEEEEcCCccccC----CCCCCccccccCCCCCHHHHHHHHHHHHHHhcCCCccEEEEeCCCC-HHHHHHHHHhcccC
Confidence 478999999999999 678999999999 999999999999876 532 4555555432 45788888763211
Q ss_pred ceeeEEEEcC------------------------CCCChHHHHHHH-----Hhc-C--CCCcEEEEcCCccCCCCchHHH
Q 013012 76 RLHVEVATVP------------------------EDVGTAGALRAI-----AHH-L--TAKDVLVVSGDLVSDVPPGAVT 123 (451)
Q Consensus 76 ~~~~~i~~~~------------------------~~~gt~~~l~~~-----~~~-l--~~~~~lvl~~D~i~~~~~~~~l 123 (451)
.+++.+..++ .+.|+++.++.+ ++. + ..++++|.++|.+.......++
T Consensus 154 G~~I~~f~Q~~~P~i~~e~~~~l~~~~~~~~~e~~P~GtGG~~~~L~~sGll~~l~~~G~e~~~V~n~DnL~~~~d~~ll 233 (469)
T 2icy_A 154 NVDIHTFNQSKYPRVVADEFVPWPSKGKTDKEGWYPPGHGDVFPALMNSGKLDTFLSQGKEYVFVANSDNLGAIVDLTIL 233 (469)
T ss_dssp SSCEEEEECCCEECEETTTTEEGGGGTCCSGGGEECCCGGGHHHHHHHHSHHHHHHTTTCCEEEEEETTBTTCCCCHHHH
T ss_pred CceEEEEEecceeeEccccCccccCCCCCccccCCcCCchHHHHHHHhcCcHHHHHhcCCCEEEEEECCcCCcccCHHHH
Confidence 2345544331 457999888754 222 2 2468999999988776555899
Q ss_pred HHHHhcCceEEEEEeeeccCCCccCCCCCCcccCCCCCcccEEEecCCCc-eEEEeeccccccccccccHHHHhhcCeeE
Q 013012 124 AAHRRHDAVVTAMICSVPVSGLSEAGSSGAKDKTKKPGRYNIIGMDPTKQ-FLLHIATGAELEKDTRIRKSILRAVGQMD 202 (451)
Q Consensus 124 ~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~-~l~~~~~~~~~ek~~~i~~~~~~~~~~~~ 202 (451)
.+|.++++++++.+..... + ...||++... +++ .+..+. +++... ...+.. .
T Consensus 234 ~~~~~~~a~~t~~v~~k~~--~--------------~~~~Gvl~~~-dg~~~vvE~~-----e~p~~~-~~e~k~----~ 286 (469)
T 2icy_A 234 KHLIQNKNEYCMEVTPKTL--A--------------DVKGGTLISY-EGKVQLLEIA-----QVPDEH-VNEFKS----I 286 (469)
T ss_dssp HHHHHHTCSEEEEEEECCT--T--------------CCSSCEEEEE-TTEEEEECGG-----GSCGGG-HHHHHS----S
T ss_pred HHHHHcCCCeeEEEEEecc--C--------------CCceeEEEEE-CCEEEEEEEe-----ccChhh-hhhhcc----c
Confidence 9999999999988776431 1 1357877653 233 223332 222110 000000 0
Q ss_pred EecCCccceEEeechHHHHHHHhc
Q 013012 203 IRADLMDAHMYAFNRSVLQEVLDQ 226 (451)
Q Consensus 203 ~~s~l~~~giYi~~~~~l~~~~~~ 226 (451)
...++.|+|+|+|++++|+.+.+.
T Consensus 287 ~~~~~~N~g~y~~~~~~L~~i~~~ 310 (469)
T 2icy_A 287 EKFKIFNTNNLWVNLKAIKKLVEA 310 (469)
T ss_dssp SSCCEEEEEEEEEEHHHHHHHHHT
T ss_pred cccceeeEEEEEEcHHHHHHHHhc
Confidence 123567999999999999887654
No 31
>3f1c_A Putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2; structural genomics, PSI-2, protein structure initiative; 2.30A {Listeria monocytogenes str} SCOP: c.68.1.0
Probab=99.74 E-value=2.7e-17 Score=151.84 Aligned_cols=129 Identities=14% Similarity=0.169 Sum_probs=91.9
Q ss_pred CCceEEEEecCCCCCCCCCCCCCCcccccccCCcchHHHHHHHHHHCC-CcEEEEEecCchhhHHHHHhhhhhccCceee
Q 013012 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSN-IKDLIVVVEGADAALRVGGWISAAYVDRLHV 79 (451)
Q Consensus 1 m~~~avIlAgG~g~Rl~pl~~~~~pK~llpv~gkpli~~~l~~l~~~g-i~~iivv~~~~~~~~~i~~~~~~~~~~~~~~ 79 (451)
|++.|||||||.|+||.+ ...||+|+|++|+|||+|+++++.+++ +++|+|++++.. .+.+.+.+..+.... .+
T Consensus 2 ~~~~aIIlAaG~g~Rm~~---~~~pK~l~~l~Gkpll~~~l~~~~~~~~~~~ivvv~~~~~-~~~~~~~~~~~~~~~-~~ 76 (246)
T 3f1c_A 2 SLIYAQILAGGKGTRMGN---VSMPKQFLPLNGKPIIVHTVEKFILNTRFDKILISSPKEW-MNHAEDNIKKYISDD-RI 76 (246)
T ss_dssp CCEEEEEECC-----C-C---SSCCGGGSEETTEEHHHHHHHHHHTCTTCSEEEEEECGGG-HHHHHHHHHHHCCCT-TE
T ss_pred CccEEEEECCccccccCC---CCCCCeEEEECCeeHHHHHHHHHHcCCCCCEEEEEeCHHH-HHHHHHHHHHhCCCC-CE
Confidence 357899999999999943 267999999999999999999999987 999999998543 223444444432221 23
Q ss_pred EEEEcCCCCChHHHHHHHHhcCC-------CCcEEEEcCC--ccCCCCchHHHHHHHhcCceEEEE
Q 013012 80 EVATVPEDVGTAGALRAIAHHLT-------AKDVLVVSGD--LVSDVPPGAVTAAHRRHDAVVTAM 136 (451)
Q Consensus 80 ~i~~~~~~~gt~~~l~~~~~~l~-------~~~~lvl~~D--~i~~~~~~~~l~~~~~~~~~~t~~ 136 (451)
.++ ....+..++++.+++.+. .+.++++.|| ++....+..+++.+.+.++.++++
T Consensus 77 ~~~--~~~~~~~~sv~~al~~l~~~~~~~~~~~vlv~~~d~Pli~~~~i~~li~~~~~~~a~i~~~ 140 (246)
T 3f1c_A 77 VVI--EGGEDRNETIMNGIRFVEKTYGLTDDDIIVTHDAVRPFLTHRIIEENIDAALETGAVDTVI 140 (246)
T ss_dssp EEE--ECCSSHHHHHHHHHHHHHHHTCCCTTCEEEEEETTCTTCCHHHHHHHHHHHHHTSEEEEEE
T ss_pred EEE--CCCCchHHHHHHHHHHHhhhhcCCCCCEEEEecCcccCCCHHHHHHHHHHHHhcCCEEEEE
Confidence 333 345677888888877653 3569999999 677888999999999887665543
No 32
>1ezi_A CMP-N-acetylneuraminic acid synthetase; homodimer, alpha-beta-alpha, transferase; 2.00A {Neisseria meningitidis} SCOP: c.68.1.13 PDB: 1eyr_A
Probab=99.73 E-value=1.5e-17 Score=151.92 Aligned_cols=123 Identities=16% Similarity=0.147 Sum_probs=92.6
Q ss_pred CCceEEEEecCCCCCCCCCCCCCCcccccccCCcchHHHHHHHHHHCC-CcEEEEEecCchhhHHHHHhhhhhccCceee
Q 013012 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSN-IKDLIVVVEGADAALRVGGWISAAYVDRLHV 79 (451)
Q Consensus 1 m~~~avIlAgG~g~Rl~pl~~~~~pK~llpv~gkpli~~~l~~l~~~g-i~~iivv~~~~~~~~~i~~~~~~~~~~~~~~ 79 (451)
|++.|||||||.|+|| . ||+|+|++|+|||+|+++.+.+++ +++++|++++. .+.+++..+ ++
T Consensus 3 m~~~aiIlA~G~g~R~----~---~K~l~~i~gkpll~~~l~~~~~~~~~~~ivvv~~~~----~i~~~~~~~-----~~ 66 (228)
T 1ezi_A 3 KQNIAVILARQNSKGL----P---LKNLRKMNGISLLGHTINAAISSKCFDRIIVSTDGG----LIAEEAKNF-----GV 66 (228)
T ss_dssp CEEEEEEECCSSCSSS----T---TTTTCEETTEEHHHHHHHHHHHHCCCSEEEEEESCH----HHHHHHHHT-----TC
T ss_pred CceEEEEecCCCCCCC----C---CcccceeCCcCHHHHHHHHHHhCCCCCEEEEECCCH----HHHHHHHHc-----CC
Confidence 4456999999999999 3 999999999999999999999988 79999999732 344444332 23
Q ss_pred EEEEcC-----CCCChHHHHHHHHhcCC--CCcEEEEcCC--ccCCCCchHHHHHHHhcCceEEEEEee
Q 013012 80 EVATVP-----EDVGTAGALRAIAHHLT--AKDVLVVSGD--LVSDVPPGAVTAAHRRHDAVVTAMICS 139 (451)
Q Consensus 80 ~i~~~~-----~~~gt~~~l~~~~~~l~--~~~~lvl~~D--~i~~~~~~~~l~~~~~~~~~~t~~~~~ 139 (451)
.++..+ ...|++++++.+++.+. .+.++++.|| ++...++..+++.+++.++++++.+.+
T Consensus 67 ~~~~~~~~~~~~~~g~~~sv~~~l~~~~~~~d~vlv~~~D~P~~~~~~i~~l~~~~~~~~~~~~~~~~~ 135 (228)
T 1ezi_A 67 EVVLRPAELASDTASSISGVIHALETIGSNSGTVTLLQPTSPLRTGAHIREAFSLFDEKIKGSVVSACP 135 (228)
T ss_dssp EEEECCC------CHHHHHHHHHHHHHTCCSEEEEECCTTCTTCCHHHHHHHHTTCCTTTCCCEEEEEE
T ss_pred EEEeCchHHcCCCCChHHHHHHHHHHhCCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCEEEEEEe
Confidence 443332 34678899999988763 3569999999 456678999998887766666665554
No 33
>2dpw_A Hypothetical protein TTHA0179; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 2.90A {Thermus thermophilus} SCOP: c.68.1.19
Probab=99.73 E-value=6.2e-18 Score=154.77 Aligned_cols=118 Identities=25% Similarity=0.323 Sum_probs=92.0
Q ss_pred CCceEEEEecCCCCCCCCCCCCCCcccccccCCcchHHHHHHHHHHCCCcEEEEEecCchhhHHHHHhhhhhccCceeeE
Q 013012 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVE 80 (451)
Q Consensus 1 m~~~avIlAgG~g~Rl~pl~~~~~pK~llpv~gkpli~~~l~~l~~~gi~~iivv~~~~~~~~~i~~~~~~~~~~~~~~~ 80 (451)
|++.|||||||. +||.+. ....||+|+|++|+|||+|+++.+..++. +++|++. . +.+.+++ ++.
T Consensus 1 m~~~~vIlAaG~-tRl~~r-~~~~~K~l~~i~g~pll~~~l~~l~~~~~-~ivvv~~-~---~~i~~~~--------~~~ 65 (232)
T 2dpw_A 1 MRPSAIVLAGGK-EAWAER-FGVGSKALVPYRGRPMVEWVLEALYAAGL-SPVYVGE-N---PGLVPAP--------ALT 65 (232)
T ss_dssp CCCEEEEECCCB-CSGGGT-TTCSBGGGSEETTEETHHHHHHHHHHTTC-EEEEESC-C---SSCSSCC--------SEE
T ss_pred CceeEEEECCCC-Cccccc-cCCCCceeeEECCEEHHHHHHHHHHhcCC-EEEEEeC-h---HHHhhhc--------CeE
Confidence 889999999999 666555 34589999999999999999999999988 8888754 2 2333222 234
Q ss_pred EEEcCCCCChHHHHHHHHhcCCCCcEEEEcCCc--cCCCCchHHHHHHHhcCceEEEEEee
Q 013012 81 VATVPEDVGTAGALRAIAHHLTAKDVLVVSGDL--VSDVPPGAVTAAHRRHDAVVTAMICS 139 (451)
Q Consensus 81 i~~~~~~~gt~~~l~~~~~~l~~~~~lvl~~D~--i~~~~~~~~l~~~~~~~~~~t~~~~~ 139 (451)
+ +...|++++++.+++.+. +.++|++||. +...++..+++ | +.++++++...+
T Consensus 66 ~---~~~~g~~~~i~~a~~~~~-~~~lv~~~D~P~~~~~~i~~l~~-~-~~~~~~~~~~~~ 120 (232)
T 2dpw_A 66 L---PDRGGLLENLEQALEHVE-GRVLVATGDIPHLTEEAVRFVLD-K-APEAALVYPIVP 120 (232)
T ss_dssp E---CCCSSHHHHHHHHHHTCC-SEEEEEETTCTTCCHHHHHHHHH-H-CCSCSEEEEEEE
T ss_pred e---cCCCCHHHHHHHHHHHcC-CCEEEEeCCcccCCHHHHHHHHh-c-CCCCCEEEEEee
Confidence 4 567899999999998886 7899999995 67778899998 6 555666665543
No 34
>2xme_A CTP-inositol-1-phosphate cytidylyltransferase; CDP-inositol, DI-MYO-inositol phosphate; 1.89A {Archaeoglobus fulgidus} PDB: 2xmh_A*
Probab=99.72 E-value=1.4e-16 Score=145.83 Aligned_cols=103 Identities=17% Similarity=0.243 Sum_probs=74.1
Q ss_pred CceEEEEecCCCCCCCCCCCCCCcccccccCCcchHHHHHHHHHHCCCcEEEEEecCchhhHHHHHhhhhhccCceeeEE
Q 013012 2 DFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVEV 81 (451)
Q Consensus 2 ~~~avIlAgG~g~Rl~pl~~~~~pK~llpv~gkpli~~~l~~l~~~gi~~iivv~~~~~~~~~i~~~~~~~~~~~~~~~i 81 (451)
++.|||||||.|+||+|+ ||+|+|++|+|||+|+++.+.++ +++++|++ +.. +.+.+++.+.+ ..++.+
T Consensus 18 ~~~~iIlA~G~g~R~~~~-----~K~l~~i~g~pli~~~l~~l~~~-~~~i~vv~-~~~--~~~~~~~~~~~--~~~~~~ 86 (232)
T 2xme_A 18 LMKAVILAAGLGTRLGGV-----PKPLVRVGGCEIILRTMKLLSPH-VSEFIIVA-SRY--ADDIDAFLKDK--GFNYKI 86 (232)
T ss_dssp CEEEEEEECC------CC-----CGGGCEETTEEHHHHHHHHHGGG-EEEEEEEE-STT--HHHHHHHHTTS--CCCEEE
T ss_pred cceEEEECCcCcCcCCCC-----CcEEeEECCEEHHHHHHHHHHHh-CCEEEEEe-CCh--HHHHHHHHHhc--CCcEEE
Confidence 479999999999999643 99999999999999999999988 99999988 432 23444432211 123566
Q ss_pred EEcCCC-CChHHHHHHHHhcCCCCcEEEEcCCccCC
Q 013012 82 ATVPED-VGTAGALRAIAHHLTAKDVLVVSGDLVSD 116 (451)
Q Consensus 82 ~~~~~~-~gt~~~l~~~~~~l~~~~~lvl~~D~i~~ 116 (451)
+..+.. .|++++++.+++.+. +++++++||..++
T Consensus 87 v~~~~~~~g~~~~i~~a~~~~~-~~~lv~~~D~p~~ 121 (232)
T 2xme_A 87 VRHDRPEKGNGYSLLVAKNHVE-DRFILTMGDHVYS 121 (232)
T ss_dssp EECSCGGGCHHHHHHTTGGGCC-SSEEEEETTEEEC
T ss_pred EECCCCCCCcHHHHHHHHHHCC-CCEEEEcCCcccC
Confidence 655544 799999999998885 6899999996543
No 35
>2vsh_A TARI, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; nucleotidyltransferase; HET: 1PE PG4 P6G; 2.00A {Streptococcus pneumoniae} PDB: 2vsi_A*
Probab=99.71 E-value=1.3e-16 Score=146.36 Aligned_cols=123 Identities=18% Similarity=0.259 Sum_probs=82.8
Q ss_pred ceEEEEecCCCCCCCCCCCCCCcccccccCCcchHHHHHHHHHHC-CCcEEEEEecCchhhHHHHHhhhhhcc-CceeeE
Q 013012 3 FQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELS-NIKDLIVVVEGADAALRVGGWISAAYV-DRLHVE 80 (451)
Q Consensus 3 ~~avIlAgG~g~Rl~pl~~~~~pK~llpv~gkpli~~~l~~l~~~-gi~~iivv~~~~~~~~~i~~~~~~~~~-~~~~~~ 80 (451)
+.|||||||.|+||.+ ...||+|+|++|+|||+|+++++.++ ++++++|++++.. .+.+++++.++.. -.....
T Consensus 3 ~~~iIlA~G~g~R~~~---~~~~K~l~~i~g~pli~~~l~~l~~~~~~~~i~vv~~~~~-~~~~~~~~~~~~~~~~~~~~ 78 (236)
T 2vsh_A 3 IYAGILAGGTGTRMGI---SNLPKQFLELGDRPILIHTIEKFVLEPSIEKIVVGVHGDW-VSHAEDLVDKYLPLYKERII 78 (236)
T ss_dssp EEEEEEEC--------------CGGGSEETTEEHHHHHHHHHHTCTTCCCEEEEECGGG-HHHHHHHHHHHCGGGGGGEE
T ss_pred eEEEEeCCccccccCC---CCCCCeeeeeCCccHHHHHHHHHHcCCCCCeEEEEeCHHH-HHHHHHHHHhccccccCceE
Confidence 7899999999999964 25799999999999999999999998 4999999998543 1345555543210 001122
Q ss_pred EEEcCCCCChHHHHHHHHhcC----C--C-CcEEEEcCCc--cCCCCchHHHHHHHhcCc
Q 013012 81 VATVPEDVGTAGALRAIAHHL----T--A-KDVLVVSGDL--VSDVPPGAVTAAHRRHDA 131 (451)
Q Consensus 81 i~~~~~~~gt~~~l~~~~~~l----~--~-~~~lvl~~D~--i~~~~~~~~l~~~~~~~~ 131 (451)
+ .+...|+.++++.+++.+ . + +.+++++||. +...++..+++.|.+.++
T Consensus 79 ~--~~~~~~~~~~i~~~l~~~~~~~~~~~~~~vlv~~~D~P~~~~~~i~~l~~~~~~~~~ 136 (236)
T 2vsh_A 79 I--TKGGADRNTSIKNIIEAIDAYRPLTPEDIVVTHDSVRPFITLRMIQDNIQLAQNHDA 136 (236)
T ss_dssp E--EECCSSHHHHHHHHHHHHHHHSCCCTTCEEEEEETTCTTCCHHHHHHHHHHHHHSSE
T ss_pred E--ECCCCchHHHHHHHHHHHHhhccCCCCCEEEEecCCcccCCHHHHHHHHHHHHhcCc
Confidence 2 234478889998887766 2 3 5688999994 666789999999987655
No 36
>2iu8_A LPXD, UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; UDP-3- O-acyl-glucosamine N-acyltransferase, lipid A biosynthesis; HET: PLM UD1; 2.2A {Chlamydia trachomatis} PDB: 2iu9_A* 2iua_A*
Probab=99.70 E-value=2e-16 Score=154.88 Aligned_cols=72 Identities=21% Similarity=0.399 Sum_probs=45.9
Q ss_pred cCCCceeCCCCeeCCCcEECCCCEECCCCEECCCCEEe-ceEECCCCEECCCcEEe---------------------ceE
Q 013012 342 SAQNNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVK-RSVIGRHCRIGSNVKVV---------------------NSV 399 (451)
Q Consensus 342 ~~~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~-~svig~~~~ig~~~~i~---------------------~s~ 399 (451)
+.+++.|++++.|++++.|++++.||++|.|+++|.|. +++||++|.|++++.|+ .++
T Consensus 151 I~~~~~IG~~~~I~~~~~Ig~~~~IG~~~~I~~~~~I~~~~~IG~~~~I~~~~~Ig~~~~~~~~~~~~~~~~i~~~g~v~ 230 (374)
T 2iu8_A 151 VCQHAHVGSACHIGSGSVIGAYSTVGEHSYIHPRVVIRERVSIGKRVIIQPGAVIGSCGFGYVTSAFGQHKHLKHLGKVI 230 (374)
T ss_dssp ECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSSEEECTTCEECTTCEEEEECSCEEEETTTEEEECCCCCCEE
T ss_pred ECCCCEECCCCEECCCcEECCCcEECCceeeCCCcEEcccceECCCCEECCCCEECcCCcccccccCCceeEeeeeccEE
Confidence 33444445555555555555555666666666666663 46777777777777774 377
Q ss_pred ECCCCEECCCcEEe
Q 013012 400 VMNHVTIGDGCSIQ 413 (451)
Q Consensus 400 i~~~~~Ig~~~~i~ 413 (451)
|+++|.||+++.|.
T Consensus 231 Ig~~v~IG~~~~I~ 244 (374)
T 2iu8_A 231 IEDDVEIGANTTID 244 (374)
T ss_dssp ECTTCEECTTCEEE
T ss_pred ECCCCEECCCcEEc
Confidence 88888888888773
No 37
>2xwl_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; transferase, MEP pathway; HET: CTP; 1.49A {Mycobacterium smegmatis} PDB: 2xwm_A*
Probab=99.70 E-value=4.2e-16 Score=141.62 Aligned_cols=114 Identities=23% Similarity=0.216 Sum_probs=87.9
Q ss_pred CCceEEEEecCCCCCCCCCCCCCCcccccccCCcchHHHHHHHHHHCC-CcEEEEEecCchhhHHHHHhhhhhccCceee
Q 013012 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSN-IKDLIVVVEGADAALRVGGWISAAYVDRLHV 79 (451)
Q Consensus 1 m~~~avIlAgG~g~Rl~pl~~~~~pK~llpv~gkpli~~~l~~l~~~g-i~~iivv~~~~~~~~~i~~~~~~~~~~~~~~ 79 (451)
|++.|||||||.|+||. ...||+|+|++|+|||+|+++.+.+++ +++++|++++.. .+.+.+++. ..++
T Consensus 1 m~~~~vIlA~G~g~R~~----~~~~K~l~~~~g~pli~~~l~~l~~~~~~~~i~vv~~~~~-~~~~~~~~~-----~~~v 70 (223)
T 2xwl_A 1 MATVAVVPAAGSGERLR----AGRPKAFVTLGGTPLLEHALSGLRASGVIDRIVIAVPPAL-TDESKLVFG-----GEDS 70 (223)
T ss_dssp -CEEEEEECCCCCGGGT----SSSCGGGSEETTEEHHHHHHHHHHHHSCCSEEEEEECGGG-HHHHHHHTC-----BTTE
T ss_pred CceEEEEECCccCcccC----CCCCCeeeEECCeEHHHHHHHHHhcCCCCCeEEEEEcccH-HHHHHHHhc-----cCCe
Confidence 88999999999999993 457999999999999999999999987 999999998542 223444331 1124
Q ss_pred EEEEcCCCCChHHHHHHHHhcC-CCCcEEEEcCC--ccCCCCchHHHHHH
Q 013012 80 EVATVPEDVGTAGALRAIAHHL-TAKDVLVVSGD--LVSDVPPGAVTAAH 126 (451)
Q Consensus 80 ~i~~~~~~~gt~~~l~~~~~~l-~~~~~lvl~~D--~i~~~~~~~~l~~~ 126 (451)
.++. +..+++++++.+++.+ ..+.+++++|| ++...++..+++.+
T Consensus 71 ~~~~--~~~~~~~~i~~al~~~~~~~~vlv~~~D~P~~~~~~i~~l~~~~ 118 (223)
T 2xwl_A 71 VIVS--GGVDRTESVALALEAAGDAEFVLVHDAARALTPPALIARVVAAL 118 (223)
T ss_dssp EEEE--CCSSHHHHHHHHHTTCTTCSEEEECCTTCTTCCHHHHHHHHHHH
T ss_pred EEEc--CCCCHHHHHHHHHHhcCCCCEEEEEcCCcccCCHHHHHHHHHHH
Confidence 4443 3466889999998887 44568899999 45566899999988
No 38
>2yc3_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran chloroplastic; transferase, non-mevalonate-pathway, herbicide, allosteric P; HET: MW5; 1.40A {Arabidopsis thaliana} PDB: 2yc5_A* 1w77_A* 2ycm_A*
Probab=99.69 E-value=2.4e-16 Score=143.77 Aligned_cols=120 Identities=17% Similarity=0.237 Sum_probs=85.6
Q ss_pred CceEEEEecCCCCCCCCCCCCCCcccccccCCcchHHHHHHHHHHC-CCcEEEEEecCchhhHHHHHhhhhhccCceeeE
Q 013012 2 DFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELS-NIKDLIVVVEGADAALRVGGWISAAYVDRLHVE 80 (451)
Q Consensus 2 ~~~avIlAgG~g~Rl~pl~~~~~pK~llpv~gkpli~~~l~~l~~~-gi~~iivv~~~~~~~~~i~~~~~~~~~~~~~~~ 80 (451)
++.|||||||.|+|| ....||+|+|++|+|||+|+++.+.++ ++++++|++++.. +.+.+++...+ ..++.
T Consensus 4 ~~~aiIlAaG~g~R~----~~~~~K~l~~i~g~pli~~~l~~l~~~~~~~~ivvv~~~~~--~~~~~~~~~~~--~~~v~ 75 (228)
T 2yc3_A 4 SVSVILLAGGQGKRM----KMSMPKQYIPLLGQPIALYSFFTFSRMPEVKEIVVVCDPFF--RDIFEEYEESI--DVDLS 75 (228)
T ss_dssp CEEEEEECCCCC-----------CGGGSEETTEEHHHHHHHHHHHCTTEEEEEEECCGGG--HHHHHTTTTTS--SSEEE
T ss_pred ceEEEEECCcccccc----CCCCCccEeEECCEEHHHHHHHHHHcCCCCCeEEEEEChHH--HHHHHHHHHhC--CCcEE
Confidence 478999999999999 445799999999999999999999998 7999999998542 23333332211 11233
Q ss_pred EEEcCCCCChHHHHHHHHhcCCC--CcEEEEcCC--ccCCCCchHHHHHHHhcCc
Q 013012 81 VATVPEDVGTAGALRAIAHHLTA--KDVLVVSGD--LVSDVPPGAVTAAHRRHDA 131 (451)
Q Consensus 81 i~~~~~~~gt~~~l~~~~~~l~~--~~~lvl~~D--~i~~~~~~~~l~~~~~~~~ 131 (451)
++ ....|+.++++.+++.+.. +.++++.|| ++...++..+++.|.+.++
T Consensus 76 ~~--~~~~~~~~sv~~al~~~~~~~~~vl~~d~d~P~~~~~~i~~l~~~~~~~~~ 128 (228)
T 2yc3_A 76 FA--IPGKERQDSVYSGLQEIDVNSELVCIHDSARPLVNTEDVEKVLKDGSAVGA 128 (228)
T ss_dssp EE--CCCSSHHHHHHHHHTTSCTTCSEEEEEETTCTTCCHHHHHHHHHHHHHHSE
T ss_pred EE--CCCCCHHHHHHHHHHhhccCCCEEEEecCCCccCCHHHHHHHHHHHHhcCc
Confidence 33 3457999999999988753 457888898 4666789999999877654
No 39
>1vgw_A 4-diphosphocytidyl-2C-methyl-D-erythritol synthas; structural genomics, transferase; 2.35A {Neisseria gonorrhoeae} SCOP: c.68.1.13 PDB: 1vgz_A
Probab=99.67 E-value=1.9e-15 Score=138.15 Aligned_cols=119 Identities=16% Similarity=0.165 Sum_probs=82.4
Q ss_pred CCceEEEEecCCCCCCCCCCCCCCcccccccCCcchHHHHHHHHHHCC-CcEEEEEecCchhhHHHHHhhhhhccCceee
Q 013012 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSN-IKDLIVVVEGADAALRVGGWISAAYVDRLHV 79 (451)
Q Consensus 1 m~~~avIlAgG~g~Rl~pl~~~~~pK~llpv~gkpli~~~l~~l~~~g-i~~iivv~~~~~~~~~i~~~~~~~~~~~~~~ 79 (451)
|++.|||||||.|+||+ ...||+|+|++|+|||+|+++.+.+++ +++++|++++.. +.+.+ +.+... ..+
T Consensus 5 ~~~~aiIlA~G~g~R~~----~~~~K~l~~~~gkpli~~~l~~l~~~~~~~~ivvv~~~~~--~~~~~-~~~~~~--~~i 75 (231)
T 1vgw_A 5 RKNIALIPAAGIGVRFG----ADKPKQYVEIGSKTVLEHVLGIFERHEAVDLTVVVVSPED--TFADK-VQTAFP--QVR 75 (231)
T ss_dssp CCEEEEEECC--------------CCSCCEETTEEHHHHHHHHHHTCTTCCEEEEECCTTC--STHHH-HHHHCT--TSE
T ss_pred CceEEEEEcccccccCC----CCCCceEeEECCeEHHHHHHHHHHcCCCCCeEEEEECccH--HHHHH-HHhcCC--Cce
Confidence 56789999999999994 346999999999999999999999885 999999997542 24444 332211 123
Q ss_pred EEEEcCCCCChHHHHHHHHhcC-------CCCcEEEEcCC--ccCCCCchHHHHHHHhcC
Q 013012 80 EVATVPEDVGTAGALRAIAHHL-------TAKDVLVVSGD--LVSDVPPGAVTAAHRRHD 130 (451)
Q Consensus 80 ~i~~~~~~~gt~~~l~~~~~~l-------~~~~~lvl~~D--~i~~~~~~~~l~~~~~~~ 130 (451)
.+ ..+..|++++++.+++.+ ..+.+++++|| ++....+..+++.+.+.+
T Consensus 76 ~~--~~~~~~~~~si~~~l~~~~~~~~~~~~~~vlv~~~D~p~~~~~~i~~l~~~~~~~~ 133 (231)
T 1vgw_A 76 VW--KNGGQTRAETVRNGVAKLLETGLAAETDNILVHDAARCCLPSEALARLIEQAGNAA 133 (231)
T ss_dssp EE--CCCCSSHHHHHHHHHHHHHHHSSSCTTSEEEECCTTCTTCCHHHHHHHHHHHTTCT
T ss_pred EE--EcCCCcHHHHHHHHHHHHhhhccCCCCCEEEEEcCCcccCCHHHHHHHHHHHhhcC
Confidence 33 356689999999887765 34679999999 455667899999887654
No 40
>1qwj_A Cytidine monophospho-N-acetylneuraminic acid synthetase; CMP-5-N-acetylneuraminic acid synthetase, CMP-NEU5AC, sialic acid, glycosylation; HET: NCC; 2.80A {Mus musculus} SCOP: c.68.1.13
Probab=99.65 E-value=1e-15 Score=139.69 Aligned_cols=121 Identities=14% Similarity=0.112 Sum_probs=92.7
Q ss_pred CCceEEEEecCCCCCCCCCCCCCCcccccccCCcchHHHHHHHHHHCC-CcEEEEEecCchhhHHHHHhhhhhccCceee
Q 013012 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSN-IKDLIVVVEGADAALRVGGWISAAYVDRLHV 79 (451)
Q Consensus 1 m~~~avIlAgG~g~Rl~pl~~~~~pK~llpv~gkpli~~~l~~l~~~g-i~~iivv~~~~~~~~~i~~~~~~~~~~~~~~ 79 (451)
|++.|||||||.|+|| . +|+|+|++|+|||+|+++.+.+++ +++|+|++.. +.+.+++..+ ++
T Consensus 2 ~~~~aiIlA~G~s~R~----~---~K~l~~i~Gkpli~~~i~~~~~~~~~~~ivv~~~~----~~i~~~~~~~-----g~ 65 (229)
T 1qwj_A 2 PHLAALVLARGGSKGI----P---LKNIKRLAGVPLIGWVLRAALDAGVFQSVWVSTDH----DEIENVAKQF-----GA 65 (229)
T ss_dssp CCEEEEEECCSCCSSS----S---CTTTSEETTEEHHHHHHHHHHHHTCCSEEEEEESC----HHHHHHHHHT-----TC
T ss_pred CcEEEEEEcCCCCCCC----C---CcccceECCEEHHHHHHHHHHhCCCcCEEEEECCh----HHHHHHHHHc-----CC
Confidence 7889999999999999 2 599999999999999999999988 6999998852 3455555432 24
Q ss_pred EEEEcC-----CCCChHHHHHHHHhcCC-CCcEEEEcCC--ccCCCCchHHHHHHHhcCceEEEEE
Q 013012 80 EVATVP-----EDVGTAGALRAIAHHLT-AKDVLVVSGD--LVSDVPPGAVTAAHRRHDAVVTAMI 137 (451)
Q Consensus 80 ~i~~~~-----~~~gt~~~l~~~~~~l~-~~~~lvl~~D--~i~~~~~~~~l~~~~~~~~~~t~~~ 137 (451)
+++..+ ...+..++++.+++.+. .+.+++++|| ++...++..+++.|.+.+++.++.+
T Consensus 66 ~~~~~~~~~~~~~~~~~~~v~~al~~~~~~d~vlv~~~D~Pli~~~~i~~l~~~~~~~~~~~~~~~ 131 (229)
T 1qwj_A 66 QVHRRSSETSKDSSTSLDAIVEFLNYHNEVDIVGNIQATSPCLHPTDLQKVAEMIREEGYDSVFSV 131 (229)
T ss_dssp EEEECCGGGSSTTCCHHHHHHHHHTTCTTCSEEEEECTTCTTCCHHHHHHHHHHHHSSCCSEEEEE
T ss_pred EEEeChhhhcCCCCcHHHHHHHHHHhcCCCCEEEEecCCCCcCCHHHHHHHHHHHHhCCCCEEEEE
Confidence 554443 23455588888888773 4669999999 5667789999999988776644433
No 41
>2i5k_A UTP--glucose-1-phosphate uridylyltransferase; LEFT-handed beta-helix, SGC domain; 3.10A {Saccharomyces cerevisiae}
Probab=99.64 E-value=2.5e-15 Score=150.09 Aligned_cols=192 Identities=13% Similarity=0.158 Sum_probs=126.8
Q ss_pred CceEEEEecCCCCCCCCCCCCCCcccccccC-CcchHHHHHHHHHHC----CCc-EEEEEecCchhhHHHHHhhhhhccC
Q 013012 2 DFQVVVLAGGTSKKLVPLVSKEVPKALLPVA-NRPVLSYVLEQLELS----NIK-DLIVVVEGADAALRVGGWISAAYVD 75 (451)
Q Consensus 2 ~~~avIlAgG~g~Rl~pl~~~~~pK~llpv~-gkpli~~~l~~l~~~----gi~-~iivv~~~~~~~~~i~~~~~~~~~~ 75 (451)
++.+||||||.|||| ....||+|+||+ |+|||+|+++++... |+. .++|+++.+. .+.+++++.++...
T Consensus 92 k~avViLAGG~GTRm----gs~~PK~l~~V~~gk~~Le~~i~~i~~l~~~~G~~Ip~vImts~~t-~e~t~~~~~~~~~f 166 (488)
T 2i5k_A 92 KLAVLKLNGGLGTSM----GCVGPKSVIEVREGNTFLDLSVRQIEYLNRQYDSDVPLLLMNSFNT-DKDTEHLIKKYSAN 166 (488)
T ss_dssp GEEEEEECCCBSGGG----TCCSBSTTSCCBTTBCHHHHHHHHHHHHHHHHTCCCEEEEECCTTT-HHHHHHHHGGGCSS
T ss_pred CceEEEEcCCCcccC----CCCCCccccccCCCCcHHHHHHHHHHHhHHhcCCCccEEEEECCCC-HHHHHHHHHhcccc
Confidence 467899999999999 678999999999 999999999998776 532 3666666343 45678887663211
Q ss_pred ceeeEEEEcC------------------------CCCChHHHHHHH-----HhcC---CCCcEEEEcCCccCC-CCchHH
Q 013012 76 RLHVEVATVP------------------------EDVGTAGALRAI-----AHHL---TAKDVLVVSGDLVSD-VPPGAV 122 (451)
Q Consensus 76 ~~~~~i~~~~------------------------~~~gt~~~l~~~-----~~~l---~~~~~lvl~~D~i~~-~~~~~~ 122 (451)
..++.++.|. .+.||++++... ++.+ ..++++|+++|.+.. .++. +
T Consensus 167 g~~i~~f~Q~~~P~i~~d~~~~l~~~~~~~~~~~~P~GtGga~~~L~~sg~l~~l~~~g~~~v~V~ngDnL~~~~d~~-~ 245 (488)
T 2i5k_A 167 RIRIRSFNQSRFPRVYKDSLLPVPTEYDSPLDAWYPPGHGDLFESLHVSGELDALIAQGREILFVSNGDNLGATVDLK-I 245 (488)
T ss_dssp SCEEEEECCCCEECEETTTCCBSCSSSSSCTTSEECCCGGGHHHHHHHHTHHHHHHHTTCCEEEEECTTBSSCCCCHH-H
T ss_pred CceEEEEEeCccceEccccceeeccCCCCCceeeecCCCchhhhhhhhcCcHHHHHhcCCCEEEEEeCCcCCCcccHH-H
Confidence 2245555444 467999998743 3433 357899999996654 5775 6
Q ss_pred HHHHHhcCceEEEEEeeeccCCCccCCCCCCcccCCCCC-cccEEEecCCCceEEEeeccccccccccccHHHHhhcCee
Q 013012 123 TAAHRRHDAVVTAMICSVPVSGLSEAGSSGAKDKTKKPG-RYNIIGMDPTKQFLLHIATGAELEKDTRIRKSILRAVGQM 201 (451)
Q Consensus 123 l~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~d~~~~~l~~~~~~~~~ek~~~i~~~~~~~~~~~ 201 (451)
+.+|.+.++++++.+...+ + +. .||++..+ +++ ..+.|-.+..+.. ...+...
T Consensus 246 L~~~~~~~a~~t~~v~~~~--~---------------p~~~yG~Iv~~-dG~--~~iVE~~e~~~e~---~~~~~~~--- 299 (488)
T 2i5k_A 246 LNHMIETGAEYIMELTDKT--R---------------ADVKGGTLISY-DGQ--VRLLEVAQVPKEH---IDEFKNI--- 299 (488)
T ss_dssp HHHHHHSCCSEEEEEEECC--G---------------GGSSSCEEEEE-TTE--EEEECGGGSCTTS---HHHHTCT---
T ss_pred HHHHHhcCCcEEEEEEEec--C---------------CCCceeEEEEE-CCc--EEEEEeccCCHHH---Hhhcccc---
Confidence 6899899999998877543 1 22 47877665 343 2233212111110 0001000
Q ss_pred EEecCCccceEEeechHHHHHHHhc
Q 013012 202 DIRADLMDAHMYAFNRSVLQEVLDQ 226 (451)
Q Consensus 202 ~~~s~l~~~giYi~~~~~l~~~~~~ 226 (451)
..-..+|+|+|+|+.++|..+++.
T Consensus 300 -~~~~~~Ntgi~~f~~~~L~~~l~~ 323 (488)
T 2i5k_A 300 -RKFTNFNTNNLWINLKAVKRLIES 323 (488)
T ss_dssp -TTCCEEEEEEEEEEHHHHHHHHHT
T ss_pred -cccCEEEEEEEEEeHHHHHHHHhh
Confidence 012467999999999999888764
No 42
>3r8y_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- acetyltransferase; structural genomics, csgid; 1.70A {Bacillus anthracis} PDB: 3cj8_A*
Probab=99.64 E-value=2.9e-15 Score=137.59 Aligned_cols=133 Identities=13% Similarity=0.160 Sum_probs=93.3
Q ss_pred hhhhccCHHHHHHHchhccccccccCC--ccccCCCceeCCCCeeCCCcEECCCCEECCCCEECCCCEEe-ceEECCCCE
Q 013012 312 YCVRLNSIQAFMDINRDVIGEANHLSG--YNFSAQNNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVK-RSVIGRHCR 388 (451)
Q Consensus 312 ~~~~i~~~~~y~~~~~~~l~~~~~~~~--~~~~~~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~-~svig~~~~ 388 (451)
+|.++++ |++.++.++........ ..........++++.|++++.|++++.||++|.|++++.|. +++||++|.
T Consensus 53 ~w~di~~---~l~~n~~~l~~~~~~~~~~~~~~~~~~~~~~~~~I~~~a~I~~~v~Ig~~~~I~~~s~I~~~~~IG~~~~ 129 (240)
T 3r8y_A 53 EWSEIKT---ILDENSKYIVDYVVENDRRNSAIPMLDLKGIKARIEPGAIIRDHVEIGDNAVIMMNATINIGAVIGEGSM 129 (240)
T ss_dssp EHHHHHH---HHHHTTTTEEEEEEEECCBSBCSCBCCCTTCSSEECTTCEEBSSCEECTTCEECTTCEECTTCEECTTCE
T ss_pred cHHHHHH---HHHhccceechhhhhhhhhhhccchhhccCCCCEECCCCEECCCcEECCCCEECCCCEECCCCEECCCCE
Confidence 3888876 78888877643211000 00011112234556666666666777777777777777774 578888888
Q ss_pred ECCCcEEe-ceEECCCCEECCCcEEeC---------eEECCCCEECCCcEEc-ceEECCCCEECCCCccC
Q 013012 389 IGSNVKVV-NSVVMNHVTIGDGCSIQG---------SVICSNAQLQERVALK-DCQVLSLSTSVFLSLSS 447 (451)
Q Consensus 389 ig~~~~i~-~s~i~~~~~Ig~~~~i~~---------~ii~~~~~i~~~~~i~-~~~ig~~~~i~~~~~~~ 447 (451)
|+.+|.|+ +++|+++|+||+++.+.+ ++||+++.||.+++|. +++||++++|++++...
T Consensus 130 I~~~~~I~~~~~IG~~~~I~~~~~i~~~~~~~~~~~~~Ig~~~~IG~~~~I~~~~~Ig~~~~I~~gsvV~ 199 (240)
T 3r8y_A 130 IDMNAVLGGRATVGKNCHVGAGAVLAGVIEPPSAKPVIVEDDVVIGANVVVLEGVTVGKGAVVAAGAVVT 199 (240)
T ss_dssp ECTTCEECTTCEECTTCEECTTCEECCCCSCTTSCCCEECTTCEECTTCEECTTCEECTTCEECTTCEEC
T ss_pred ECCCCEECCCCEECCCcEECCCcEECCCccCCCCCCcEECCCCEECCCCEECCCcEECCCCEECCCCEEC
Confidence 88888886 788999999999988876 8888888888888884 68888888888887543
No 43
>2wee_A MOBA-related protein; unknown function; 1.65A {Mycobacterium tuberculosis H37RV} PDB: 2we9_A 2yes_A
Probab=99.62 E-value=1.3e-15 Score=135.45 Aligned_cols=112 Identities=28% Similarity=0.384 Sum_probs=87.4
Q ss_pred CCceEEEEecCCCCCCCCCCCCCCcccccccCCcchHHHHHHHHHHCCCcEEEEEecCchhhHHHHHhhhhhccCceeeE
Q 013012 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVE 80 (451)
Q Consensus 1 m~~~avIlAgG~g~Rl~pl~~~~~pK~llpv~gkpli~~~l~~l~~~gi~~iivv~~~~~~~~~i~~~~~~~~~~~~~~~ 80 (451)
|++.+||||||.|+|| +.||+|+|++|+|||+|+++.+..+++++++|++++. .+.+.+++.+ .++.
T Consensus 4 ~~~~~iIlA~G~~~R~------g~~K~l~~~~g~pll~~~l~~l~~~~~~~i~vv~~~~--~~~~~~~~~~-----~~~~ 70 (197)
T 2wee_A 4 TQITGVVLAAGRSNRL------GTPKQLLPYRDTTVLGATLDVARQAGFDQLILTLGGA--ASAVRAAMAL-----DGTD 70 (197)
T ss_dssp SEEEEEEEECCCCTTT------SSCGGGSEETTEEHHHHHHHHHHHTTCSEEEEEECTT--HHHHHHHSCC-----TTSE
T ss_pred CceEEEEECCCCcccC------CCCeEcCeeCCccHHHHHHHHHHhcCCCcEEEEeCCC--HHHHHHHhcc-----CCCE
Confidence 4578999999999999 4899999999999999999999999999999999754 2345554432 2355
Q ss_pred EEEcC-CCCChHHHHHHHHhcCC--CCcEEEEcCCc--cCCCCchHHHHH
Q 013012 81 VATVP-EDVGTAGALRAIAHHLT--AKDVLVVSGDL--VSDVPPGAVTAA 125 (451)
Q Consensus 81 i~~~~-~~~gt~~~l~~~~~~l~--~~~~lvl~~D~--i~~~~~~~~l~~ 125 (451)
++..+ ...|++++++.+++.+. .+.+++++||. +....+..+++.
T Consensus 71 ~~~~~~~~~g~~~~i~~al~~~~~~~~~vlv~~~D~P~~~~~~i~~l~~~ 120 (197)
T 2wee_A 71 VVVVEDVERGCAASLRVALARVHPRATGIVLMLGDQPQVAPATLRRIIDV 120 (197)
T ss_dssp EEECC----CCHHHHHHHHTTSCTTEEEEEEEETTCTTCCHHHHHHHHHH
T ss_pred EEECCCcccCHHHHHHHHHHHhcccCCeEEEEeCCcCCCCHHHHHHHHhh
Confidence 55543 34799999999998873 35699999994 556678888877
No 44
>2waw_A MOBA relate protein; unknown function; HET: PGE; 1.60A {Mycobacterium SP}
Probab=99.61 E-value=2.2e-15 Score=134.30 Aligned_cols=118 Identities=25% Similarity=0.377 Sum_probs=91.1
Q ss_pred CCceEEEEecCCCCCCCCCCCCCCcccccccCCcchHHHHHHHHHHCCCcEEEEEecCchhhHHHHHhhhhhccCceeeE
Q 013012 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVE 80 (451)
Q Consensus 1 m~~~avIlAgG~g~Rl~pl~~~~~pK~llpv~gkpli~~~l~~l~~~gi~~iivv~~~~~~~~~i~~~~~~~~~~~~~~~ 80 (451)
|++.|||||||.|+|| +.||+|+|++|+|||+|+++.+..+++++++|++++. .+.+.+++.+ .++.
T Consensus 4 ~~~~~iIlA~G~~~R~------g~~K~l~~~~g~pli~~~l~~l~~~~~~~i~vv~~~~--~~~~~~~~~~-----~~~~ 70 (199)
T 2waw_A 4 SRVTGVVLAAGYSRRL------GTPKQLLPLGDTTLLGATLAMARRCPFDQLIVTLGGA--ADEVLEKVEL-----DGLD 70 (199)
T ss_dssp CCEEEEEEESSCCTTT------TSCGGGCEETTEEHHHHHHHHHHTSSCSEEEEEECTT--HHHHHHHSCC-----TTSE
T ss_pred CceEEEEECCCCCCCC------CCCEEeCEeCccCHHHHHHHHHHhCCCCcEEEEeCCC--HHHHHHHhcc-----CCCE
Confidence 4578999999999999 3799999999999999999999999999999999754 2355554432 2345
Q ss_pred EEEcC-CCCChHHHHHHHHhcC--CCCcEEEEcCCc--cCCCCchHHHHHHHhcCceE
Q 013012 81 VATVP-EDVGTAGALRAIAHHL--TAKDVLVVSGDL--VSDVPPGAVTAAHRRHDAVV 133 (451)
Q Consensus 81 i~~~~-~~~gt~~~l~~~~~~l--~~~~~lvl~~D~--i~~~~~~~~l~~~~~~~~~~ 133 (451)
++..+ ...|++++++.+++.+ ..+.+++++||. +...++..+++. +.++.+
T Consensus 71 ~~~~~~~~~g~~~~i~~al~~~~~~~~~vlv~~~D~P~~~~~~i~~l~~~--~~~~~~ 126 (199)
T 2waw_A 71 IVLVDDAGLGCSSSLKSALTWVDPTAEGIVLMLGDQPGITASAVASLIAG--GRGATI 126 (199)
T ss_dssp EEECCCCCTTCCCHHHHHHHTSCTTCSEEEEEETTCTTCCHHHHHHHHHH--HTTCSE
T ss_pred EEECCCcccCHHHHHHHHHHhhhccCCeEEEEeCCcccCCHHHHHHHHhh--cCCCCE
Confidence 55433 3479999999998887 346799999994 556678888887 344443
No 45
>3rsb_A Adenosylcobinamide-phosphate guanylyltransferase; pyrophosphorylase binding motif, pyrophosphorylase; HET: GTP; 2.80A {Methanocaldococcus jannaschii}
Probab=99.61 E-value=3.8e-16 Score=139.04 Aligned_cols=117 Identities=20% Similarity=0.311 Sum_probs=85.1
Q ss_pred ceEEEEecCCCCCCCCCCCCCCcccccccCCcchHHHHHHHHHHCCCcEEEEEecCchhhHHHHHhhhhhccCceeeEEE
Q 013012 3 FQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVEVA 82 (451)
Q Consensus 3 ~~avIlAgG~g~Rl~pl~~~~~pK~llpv~gkpli~~~l~~l~~~gi~~iivv~~~~~~~~~i~~~~~~~~~~~~~~~i~ 82 (451)
|+|||||||.|+||.| .||+|+|++|+|||+|+++++.++++++++|++++. .+.+.+++...+....++.++
T Consensus 1 m~aiIlA~G~s~R~~~-----~~K~l~~~~g~pli~~~l~~l~~~~~~~v~vv~~~~--~~~i~~~~~~~~~~~~~~~~~ 73 (196)
T 3rsb_A 1 MDALIMAGGKGTRMGG-----VEKPLIKLCGRCLIDYVVSPLLKSKVNNIFIATSPN--TPKTKEYINSAYKDYKNIVVI 73 (196)
T ss_dssp CEEEEEC----CGGGG-----SCGGGCEETTEEHHHHHHHHHHSSSCCCEEEECCTT--CHHHHHHHHHHTTTTTEEEE-
T ss_pred CEEEEECCCCCCcCCC-----CCccEEEECCEEHHHHHHHHHHHCCCCEEEEEeCCC--hHHHHHHHHhhccCCCCEEEE
Confidence 5899999999999943 799999999999999999999999999999999754 345666665532211134433
Q ss_pred EcCCCCChHHHHHHHHhcCCCCcEEEEcCC--ccCCCCchHHHHHHHh
Q 013012 83 TVPEDVGTAGALRAIAHHLTAKDVLVVSGD--LVSDVPPGAVTAAHRR 128 (451)
Q Consensus 83 ~~~~~~gt~~~l~~~~~~l~~~~~lvl~~D--~i~~~~~~~~l~~~~~ 128 (451)
.+...|++++++.+++.+ .+.++++.|| ++...++..+++.+.+
T Consensus 74 -~~~~~g~~~si~~al~~~-~~~vlv~~~D~P~i~~~~i~~l~~~~~~ 119 (196)
T 3rsb_A 74 -DTSGKGYIEDLNECIGYF-SEPFLVVSSDLINLKSKIINSIVDYFYC 119 (196)
T ss_dssp --------CCCCCTTTTTC-SSCEEEEETTEESCCHHHHHHHHHHHHH
T ss_pred -ECCCCCcHHHHHHHHHhC-CCCEEEEeCCcccCCHHHHHHHHHHHHh
Confidence 345678888999888887 7889999999 4778899999999986
No 46
>1xhd_A Putative acetyltransferase/acyltransferase; structural genomics, protein structure initiative, medwest C structural genomics, MCSG; 1.90A {Bacillus cereus} SCOP: b.81.1.5 PDB: 3vnp_A 2eg0_A
Probab=99.61 E-value=8.7e-15 Score=127.39 Aligned_cols=104 Identities=15% Similarity=0.157 Sum_probs=82.2
Q ss_pred CCCceeCCCCeeCCCcEECCCCEECCCCEECCCCEEec----eEECCCCEECCCcEEe-----ceEECCCCEECCCcEEe
Q 013012 343 AQNNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVKR----SVIGRHCRIGSNVKVV-----NSVVMNHVTIGDGCSIQ 413 (451)
Q Consensus 343 ~~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~~----svig~~~~ig~~~~i~-----~s~i~~~~~Ig~~~~i~ 413 (451)
.....+++++.|++++.+.+++.||++|.|+++|.|.. ++||++|.|+++|.|. +++|++++.|+.++.|.
T Consensus 10 ~~~~~ig~~~~I~~~~~i~~~v~IG~~~~I~~~~~i~~~~~~v~IG~~~~I~~~~~I~~~~~~~~~Ig~~~~Ig~~~~i~ 89 (173)
T 1xhd_A 10 EKKPKIASSAFIADYVTITGDVYVGEESSIWFNTVIRGDVSPTIIGDRVNVQDQCTLHQSPQYPLILEDDVTVGHQVILH 89 (173)
T ss_dssp TBCCEECTTCEECTTCEEEEEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECCTTCCEEECTTCEECTTCEEE
T ss_pred CCCCEECCCcEECCCCEEECCEEECCCcEEcCCcEEecCCCeEEECCCCEECCCCEEEeCCCCCeEECCCCEECCCCEEe
Confidence 34556777777777777777778888888888888764 6888888888888887 78888888888888888
Q ss_pred CeEECCCCEECCCcEEc-ceEECCCCEECCCCcc
Q 013012 414 GSVICSNAQLQERVALK-DCQVLSLSTSVFLSLS 446 (451)
Q Consensus 414 ~~ii~~~~~i~~~~~i~-~~~ig~~~~i~~~~~~ 446 (451)
+++||++++|++++.|. ++.||++++|++++..
T Consensus 90 ~~~Ig~~~~Ig~~~~i~~~~~Ig~~~~Ig~~s~V 123 (173)
T 1xhd_A 90 SCHIKKDALIGMGSIILDGAEIGEGAFIGAGSLV 123 (173)
T ss_dssp SCEECTTCEECTTCEECTTCEECTTCEECTTCEE
T ss_pred CCEECCCCEEcCCCEEcCCCEECCCCEECCCCEE
Confidence 88888888888888877 4788888887777643
No 47
>1i52_A 4-diphosphocytidyl-2-C-methylerythritol synthase; cytidylyltransferase, deoxyxylulose-5-phosphate pathway (DXP isoprenoid biosynthesys, MEP; HET: CTP; 1.50A {Escherichia coli} SCOP: c.68.1.13 PDB: 1ini_A* 1inj_A 1vgt_A 1vgu_A 3n9w_A 1h3m_A
Probab=99.61 E-value=1.4e-14 Score=132.68 Aligned_cols=119 Identities=20% Similarity=0.248 Sum_probs=89.2
Q ss_pred CCceEEEEecCCCCCCCCCCCCCCcccccccCCcchHHHHHHHHHHCC-CcEEEEEecCchhhHHHHHhhhhhccCceee
Q 013012 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSN-IKDLIVVVEGADAALRVGGWISAAYVDRLHV 79 (451)
Q Consensus 1 m~~~avIlAgG~g~Rl~pl~~~~~pK~llpv~gkpli~~~l~~l~~~g-i~~iivv~~~~~~~~~i~~~~~~~~~~~~~~ 79 (451)
|++.|||||||.|+|| ....||+|+|++|+|||+|+++.+.+++ +++++|++++.. +.+.+ +..+. . ..+
T Consensus 6 ~~~~~iIlA~G~g~R~----~~~~~K~l~~i~g~pll~~~i~~l~~~~~~~~ivvv~~~~~--~~~~~-~~~~~-~-~~v 76 (236)
T 1i52_A 6 LDVCAVVPAAGFGRRM----QTECPKQYLSIGNQTILEHSVHALLAHPRVKRVVIAISPGD--SRFAQ-LPLAN-H-PQI 76 (236)
T ss_dssp CCEEEEEEECCCCGGG----CCSSCGGGSEETTEEHHHHHHHHHHTSTTEEEEEEEECTTC--CSGGG-SGGGG-C-TTE
T ss_pred CceeEEEECCcCcccc----CCCCCcceeeECCEEHHHHHHHHHHhCCCCCeEEEEeCccH--HHHHH-HHhcC-C-CCE
Confidence 5689999999999999 4457999999999999999999999887 899999997532 22333 22211 1 124
Q ss_pred EEEEcCCCCChHHHHHHHHhcCC-CCcEEEEcCC--ccCCCCchHHHHHHHhcC
Q 013012 80 EVATVPEDVGTAGALRAIAHHLT-AKDVLVVSGD--LVSDVPPGAVTAAHRRHD 130 (451)
Q Consensus 80 ~i~~~~~~~gt~~~l~~~~~~l~-~~~~lvl~~D--~i~~~~~~~~l~~~~~~~ 130 (451)
.++. ...|+.++++.+++.+. .+.+++++|| ++....+..+++.+.+.+
T Consensus 77 ~~~~--~~~g~~~~i~~al~~~~~~~~~lv~~~D~P~~~~~~i~~l~~~~~~~~ 128 (236)
T 1i52_A 77 TVVD--GGDERADSVLAGLKAAGDAQWVLVHDAARPCLHQDDLARLLALSETSR 128 (236)
T ss_dssp EEEE--CCSSHHHHHHHHHHTSTTCSEEEECCTTCTTCCHHHHHHHHGGGGTCS
T ss_pred EEEC--CCCCHHHHHHHHHHhcCCCCEEEEEcCccccCCHHHHHHHHHHHHhcC
Confidence 4432 34689999999988874 4679999999 455567888888876654
No 48
>3ixc_A Hexapeptide transferase family protein; niaid, ssgcid, seattle structural genomics center for infect disease, GRAM-negative bacteria; 1.61A {Anaplasma phagocytophilum}
Probab=99.61 E-value=7.4e-15 Score=129.94 Aligned_cols=105 Identities=16% Similarity=0.189 Sum_probs=88.2
Q ss_pred cCCCceeCCCCeeCCCcEECCCCEECCCCEECCCCEEe----ceEECCCCEECCCcEEe------ceEECCCCEECCCcE
Q 013012 342 SAQNNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVK----RSVIGRHCRIGSNVKVV------NSVVMNHVTIGDGCS 411 (451)
Q Consensus 342 ~~~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~----~svig~~~~ig~~~~i~------~s~i~~~~~Ig~~~~ 411 (451)
.+....+++++.|++++.|.+++.||++|.|+++|.|. +.+||++|.|+++|.|. +++|++++.||+++.
T Consensus 30 ~~~~~~ig~~~~I~~~~~i~~~v~IG~~~~I~~~~~I~~~~~~i~IG~~~~I~~~~~I~~~~~~g~~~Ig~~~~Ig~~~~ 109 (191)
T 3ixc_A 30 AGVSPSVDSTAFIAGNARIIGDVCIGKNASIWYGTVLRGDVDKIEVGEGTNIQDNTVVHTDSMHGDTVIGKFVTIGHSCI 109 (191)
T ss_dssp TTBCCEECTTSEECTTCEEEEEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEECC----CCEEECTTCEECTTCE
T ss_pred cCCCCEECCCCEECCCCEEeCCcEECCCCEECCCCEEecCCCCeEECCCCEECCCCEEeecCCcCCeEECCCCEECCCCE
Confidence 34566778888888888888888888888888888886 34899999999999997 899999999999999
Q ss_pred EeCeEECCCCEECCCcEEc-ceEECCCCEECCCCcc
Q 013012 412 IQGSVICSNAQLQERVALK-DCQVLSLSTSVFLSLS 446 (451)
Q Consensus 412 i~~~ii~~~~~i~~~~~i~-~~~ig~~~~i~~~~~~ 446 (451)
|.+++||+++.|+.++.|. ++.||++++|++++..
T Consensus 110 i~~~~Ig~~~~Ig~~~~I~~~~~Ig~~~~Ig~gsvV 145 (191)
T 3ixc_A 110 LHACTLGNNAFVGMGSIVMDRAVMEEGSMLAAGSLL 145 (191)
T ss_dssp ECSCEECTTCEECTTCEECTTCEECTTCEECTTCEE
T ss_pred EECCEECCCCEECCCCEEeCCeEECCCCEECCCCEE
Confidence 9999999999999998887 4888888888777643
No 49
>3q80_A 2-C-methyl-D-erythritol 4-phosphate cytidyltransf; TB structural genomics consortium, TBSGC, rossman fold; HET: CDM; 2.00A {Mycobacterium tuberculosis} SCOP: c.68.1.0 PDB: 3q7u_A* 3okr_A 2xwn_A*
Probab=99.58 E-value=9.2e-14 Score=126.33 Aligned_cols=113 Identities=18% Similarity=0.234 Sum_probs=88.5
Q ss_pred ceEEEEecCCCCCCCCCCCCCCcccccccCCcchHHHHHHHHHHCC-CcEEEEEecCchhhHHHHHhhhhhccCceeeEE
Q 013012 3 FQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSN-IKDLIVVVEGADAALRVGGWISAAYVDRLHVEV 81 (451)
Q Consensus 3 ~~avIlAgG~g~Rl~pl~~~~~pK~llpv~gkpli~~~l~~l~~~g-i~~iivv~~~~~~~~~i~~~~~~~~~~~~~~~i 81 (451)
+.|||||||.|+|| ....||+|++++|+|||+|+++.+.+++ +++++|++++.. .+.+++++.. .+.+
T Consensus 8 ~~aIIlAaG~g~Rm----g~~~~K~l~~l~Gkpll~~~l~~~~~~~~~~~ivVv~~~~~-~~~~~~~~~~------~v~~ 76 (231)
T 3q80_A 8 VVAIVPAAGSGERL----AVGVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPADR-TDEARQILGH------RAMI 76 (231)
T ss_dssp EEEEEECCCCCTTT----CSSSCGGGCEETTEEHHHHHHHHHHHTSCCCEEEEEECGGG-HHHHHHHHGG------GCEE
T ss_pred eEEEEECCCCCccC----CCCCCceEEEECCeEHHHHHHHHHHhCCCCCeEEEECChHH-HHHHHHHhcC------CeEE
Confidence 68999999999999 5568999999999999999999999875 899999998542 2344444322 2444
Q ss_pred EEcCCCCChHHHHHHHHhcCCC----CcEEEEcCC--ccCCCCchHHHHHHHh
Q 013012 82 ATVPEDVGTAGALRAIAHHLTA----KDVLVVSGD--LVSDVPPGAVTAAHRR 128 (451)
Q Consensus 82 ~~~~~~~gt~~~l~~~~~~l~~----~~~lvl~~D--~i~~~~~~~~l~~~~~ 128 (451)
+. ...+..++++.+++.+.+ +.++++.|| ++....+..+++.+++
T Consensus 77 v~--gg~~r~~sv~~gl~~~~~~~~~d~Vlv~~~d~Pli~~~~i~~li~~~~~ 127 (231)
T 3q80_A 77 VA--GGSNRTDTVNLALTVLSGTAEPEFVLVHDAARALTPPALVARVVEALRD 127 (231)
T ss_dssp EE--CCSSHHHHHHHHHGGGC---CCSEEEECCTTCTTCCHHHHHHHHHHHHT
T ss_pred Ec--CCCchHHHHHHHHHHhhhcCCCCEEEEEcCCcCCCCHHHHHHHHHHHhh
Confidence 42 345567899999888753 468999999 7778889999998876
No 50
>3tv0_A Dynactin subunit 6; LEFT-handed beta-helix, ARP11, cytosol, structural; 2.15A {Homo sapiens}
Probab=99.58 E-value=2.7e-14 Score=126.73 Aligned_cols=103 Identities=14% Similarity=0.144 Sum_probs=75.2
Q ss_pred CCceeCCCCeeCCCcEECCCCEECCCCEECCCCEEe----ceEECCCCEECCCcEEe-----------------ceEECC
Q 013012 344 QNNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVK----RSVIGRHCRIGSNVKVV-----------------NSVVMN 402 (451)
Q Consensus 344 ~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~----~svig~~~~ig~~~~i~-----------------~s~i~~ 402 (451)
.++.|+|++.|.+++.|++++.||++|.|+++|.|. +.+||++|.|++++.|. .++|++
T Consensus 11 ~~v~I~~~a~I~~~a~I~g~V~IG~~~~I~~~~~I~~~~g~i~IG~~~~I~~~~~I~~~~~~~~~~~~~~~~~~~~~Ig~ 90 (194)
T 3tv0_A 11 KSVKIAPGAVVCVESEIRGDVTIGPRTVIHPKARIIAEAGPIVIGEGNLIEEQALIINAYPDNITPDTEDPEPKPMIIGT 90 (194)
T ss_dssp -CEEECTTCEECTTSEEESSEEECTTCEECTTCEEEESSSCEEECTTCEECTTCEEEECCCSCC---------CCEEECS
T ss_pred CCCEECCCCEEcCCCEEeCCCEECCCCEECCCCEEccCCCCeEECCCccccCCcccccccccccccccccCcCCceEECC
Confidence 466777888888888887788888888888888774 36788888888888874 357788
Q ss_pred CCEECCCcEEeCeEECCCCEECCCcEEc-ceEECCCCEECCCCcc
Q 013012 403 HVTIGDGCSIQGSVICSNAQLQERVALK-DCQVLSLSTSVFLSLS 446 (451)
Q Consensus 403 ~~~Ig~~~~i~~~ii~~~~~i~~~~~i~-~~~ig~~~~i~~~~~~ 446 (451)
++.|+.++.+.++.||++++|+.++.|. ++.||++++|++++..
T Consensus 91 ~~~i~~~~~i~~~~Ig~~~~Ig~~~~I~~gv~IG~~~~IgagsvV 135 (194)
T 3tv0_A 91 NNVFEVGCYSQAMKMGDNNVIESKAYVGRNVILTSGCIIGACCNL 135 (194)
T ss_dssp SCEECTTCEECCSEECSSCEECTTCEECTTEEECSSCEECTTCEE
T ss_pred cceEecceeEeeeeecccceecceeeECCeEEECCCCEECCCCEE
Confidence 8888877777777777777777777666 4666666666666543
No 51
>3kwd_A Carbon dioxide concentrating mechanism protein; LEFT-handed beta helix, gamma carbonic anhydrase, disulfide dependent activity; 1.10A {Thermosynechococcus elongatus} PDB: 3kwe_A 3kwc_A
Probab=99.57 E-value=2.2e-14 Score=129.26 Aligned_cols=107 Identities=10% Similarity=0.087 Sum_probs=81.1
Q ss_pred cccCCCceeCCCCeeCCCcEEC----CCCEECCCCEECCCCEEec---------------eEECCCCEECCCcEEec-eE
Q 013012 340 NFSAQNNIIHPSAELGSKTTVG----PHCMLGEGSQMGDKCSVKR---------------SVIGRHCRIGSNVKVVN-SV 399 (451)
Q Consensus 340 ~~~~~~~~i~~~~~i~~~~~i~----~~~~i~~~~~i~~~~~i~~---------------svig~~~~ig~~~~i~~-s~ 399 (451)
..+.++..|++++.|++++.|. .++.||++|.|+++|.|.. ++||++|.|++++.|.+ ++
T Consensus 52 a~i~~~v~IG~~~~I~~~~~I~~~~~~~v~IG~~~~Ig~~~~I~~~~~~~~ig~~~~~~~~~IG~~v~Ig~~~~I~~~v~ 131 (213)
T 3kwd_A 52 SNLIGDVRIKDYVHIAPGTSIRADEGTPFHIGSRTNIQDGVVIHGLQQGRVIGDDGQEYSVWIGDNVSITHMALIHGPAY 131 (213)
T ss_dssp SEEEESEEECTTCEECTTCEEEESSSCCEEECTTCEECTTCEEEECSSCCEECTTSCEESEEECTTCEECTTCEEEEEEE
T ss_pred CEEeCceEECCCCEEcCCcEEecCCCCceEECCCCEECCCCEEEecCCCceeccCCcccceEECCCcEECCCcEEcCCCE
Confidence 3333455566666666666653 2467788888888888863 78888888888888886 88
Q ss_pred ECCCCEECCCcEEeCeEECCCCEECCCcEEcceEECCCCEECCCCcc
Q 013012 400 VMNHVTIGDGCSIQGSVICSNAQLQERVALKDCQVLSLSTSVFLSLS 446 (451)
Q Consensus 400 i~~~~~Ig~~~~i~~~ii~~~~~i~~~~~i~~~~ig~~~~i~~~~~~ 446 (451)
|+++|.||.++.|.+++||++++|+++++|.+++|++++.|++++..
T Consensus 132 Ig~~v~IG~~a~I~~~~Ig~~~~Igags~V~~~~i~~~~~v~~~~vv 178 (213)
T 3kwd_A 132 IGDGCFIGFRSTVFNARVGAGCVVMMHVLIQDVEIPPGKYVPSGMVI 178 (213)
T ss_dssp ECTTCEECTTCEEEEEEECTTCEECSSCEEESCEECTTBEECTTCEE
T ss_pred ECCCCEECCCCEEeCcEECCCCEEcCCCEECCcEeCCCCEECCCcEE
Confidence 89999999988888888999999998888877778888887777644
No 52
>3r3r_A Ferripyochelin binding protein; structural genomics, csgid, center for structural genomics O infectious diseases, all beta protein; 1.20A {Salmonella enterica subsp} SCOP: b.81.1.0 PDB: 3tio_A 3tis_A
Probab=99.57 E-value=2.2e-14 Score=126.60 Aligned_cols=101 Identities=13% Similarity=0.068 Sum_probs=72.0
Q ss_pred CceeCCCCeeCCCcEECCCCEECCCCEECCCCEEec----eEECCCCEECCCcEE------------eceEECCCCEECC
Q 013012 345 NNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVKR----SVIGRHCRIGSNVKV------------VNSVVMNHVTIGD 408 (451)
Q Consensus 345 ~~~i~~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~~----svig~~~~ig~~~~i------------~~s~i~~~~~Ig~ 408 (451)
...+++++.|++++.+++++.||++|.|++++.|.. ++||++|.|++++.| .+++|++++.||+
T Consensus 15 ~~~ig~~~~I~~~~~i~~~v~IG~~~~I~~~~~i~~~~~~i~IG~~~~I~~~~~I~~~~~~~~~~~~~~~~Ig~~~~Ig~ 94 (187)
T 3r3r_A 15 FPGIGQRVMIDTSSVVIGDVRLADDVGIWPLVVIRGDVNYVAIGARTNIQDGSVLHVTHKSSSNPHGNPLIIGEDVTVGH 94 (187)
T ss_dssp CCEECTTCEECTTCEEEEEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECBCCBTTBC-CBCEEECSSCEECT
T ss_pred CcccCCCeEECCCCEEECceEECCCCEECCCcEEEcCCccEEECCCCEECCCCEEecCCccccCCCCCCeEECCCCEECC
Confidence 445666666666666666677777777777777752 477888888888887 5678888888888
Q ss_pred CcEEeCeEECCCCEECCCcEEc-ceEECCCCEECCCCc
Q 013012 409 GCSIQGSVICSNAQLQERVALK-DCQVLSLSTSVFLSL 445 (451)
Q Consensus 409 ~~~i~~~ii~~~~~i~~~~~i~-~~~ig~~~~i~~~~~ 445 (451)
++.|.+++||++++|+.+++|. ++.||++++|++++.
T Consensus 95 ~~~i~~~~Ig~~~~Ig~~~~I~~~~~Ig~~~~Ig~~s~ 132 (187)
T 3r3r_A 95 KVMLHGCTIGNRVLVGMGSIVLDGAIIEDDVMIGAGSL 132 (187)
T ss_dssp TCEEESCEECSSEEECTTCEECTTCEECSSEEECTTCE
T ss_pred CCEEeCcEECCCCEECCCCEECCCCEECCCCEECCCCE
Confidence 8887777777777777777775 466666666666664
No 53
>1v3w_A Ferripyochelin binding protein; beta-helix, carbonic anhydrase, structural genomics, riken S genomics/proteomics initiative, RSGI, lyase; 1.50A {Pyrococcus horikoshii} SCOP: b.81.1.5 PDB: 1v67_A 2fko_A
Probab=99.57 E-value=2.7e-14 Score=124.29 Aligned_cols=100 Identities=16% Similarity=0.179 Sum_probs=59.3
Q ss_pred CceeCCCCeeCCCcEECCCCEECCCCEECCCCEEec----eEECCCCEECCCcEEe-----ceEECCCCEECCCcEEeCe
Q 013012 345 NNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVKR----SVIGRHCRIGSNVKVV-----NSVVMNHVTIGDGCSIQGS 415 (451)
Q Consensus 345 ~~~i~~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~~----svig~~~~ig~~~~i~-----~s~i~~~~~Ig~~~~i~~~ 415 (451)
...+++++.|++++.+.+++.||++|.|++++.|.. ++||++|.|+++|.|. +++|++++.|++++.|.++
T Consensus 10 ~~~i~~~~~I~~~a~i~g~v~IG~~~~I~~~~~i~~~~~~~~IG~~~~I~~~~~I~~~~~~~~~Ig~~~~I~~~~~i~~~ 89 (173)
T 1v3w_A 10 KPRIHPSAFVDENAVVIGDVVLEEKTSVWPSAVLRGDIEQIYVGKYSNVQDNVSIHTSHGYPTEIGEYVTIGHNAMVHGA 89 (173)
T ss_dssp CCEECTTCEECTTSEEEEEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECBTTBCEEECSSCEECTTCEEESC
T ss_pred CCEECCCCEECCCCEEeCCEEECCCCEECCCeEEecCCceEEECCCCEECCCcEEEecCCCCeEECCCCEECCCCEECCC
Confidence 334555555555555555555666666666665553 5666666666666665 3666666666666666666
Q ss_pred EECCCCEECCCcEEc-ceEECCCCEECCCC
Q 013012 416 VICSNAQLQERVALK-DCQVLSLSTSVFLS 444 (451)
Q Consensus 416 ii~~~~~i~~~~~i~-~~~ig~~~~i~~~~ 444 (451)
+||++++|+.++.|. +++||++++|++++
T Consensus 90 ~Ig~~~~Ig~~~~i~~~~~Ig~~~~Ig~~s 119 (173)
T 1v3w_A 90 KVGNYVIIGISSVILDGAKIGDHVIIGAGA 119 (173)
T ss_dssp EECSSEEECTTCEECTTCEECSSEEECTTC
T ss_pred EECCCCEECCCCEEeCCCEECCCCEECCCC
Confidence 666666666666554 35555555555555
No 54
>3mqg_A Lipopolysaccharides biosynthesis acetyltransferas; beta helix, acetyl transferase, transferase; HET: ACO U5P UDP PE4; 1.43A {Bordetella petrii} PDB: 3mqh_A*
Probab=99.56 E-value=5e-14 Score=124.77 Aligned_cols=105 Identities=16% Similarity=0.208 Sum_probs=72.4
Q ss_pred CCCceeCCCCeeCCCcEECCCCEECCCCEECCCCEEec-eEECCCCEECCCcEEe-ceEECCCCEECCCcEE--------
Q 013012 343 AQNNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVKR-SVIGRHCRIGSNVKVV-NSVVMNHVTIGDGCSI-------- 412 (451)
Q Consensus 343 ~~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~~-svig~~~~ig~~~~i~-~s~i~~~~~Ig~~~~i-------- 412 (451)
.+++.|++++.|++++.|++++.||++|.|++++.|.+ ++||++|.|++++.|. +++|++++.||.++.+
T Consensus 13 ~~~~~Ig~~~~I~~~~~I~~~~~IG~~~~Ig~~~~I~~~~~IG~~~~I~~~~~I~~~~~Ig~~~~ig~~~~~~~~~~~~~ 92 (192)
T 3mqg_A 13 DEGARIGAHSRIWHWVHICGGAEIGEGCSLGQNVFVGNRVRIGNRVKIQNNVSVYDNVFLEDDVFCGPSMVFTNVYNPRA 92 (192)
T ss_dssp CTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSSCEECSSCEECTTCEECTTEEECTTCEECTTCBCCSCSSCBT
T ss_pred CCCCEECCCCEECCCCEECCCcEECCCCEECCCEEECCceEECCCcEEcCCcEEeCCCEECCCCEECCceEEecccCCcc
Confidence 34445555555555555555666666666666666654 6667777777766664 5667777777766655
Q ss_pred --------eCeEECCCCEECCCcEEc-ceEECCCCEECCCCccC
Q 013012 413 --------QGSVICSNAQLQERVALK-DCQVLSLSTSVFLSLSS 447 (451)
Q Consensus 413 --------~~~ii~~~~~i~~~~~i~-~~~ig~~~~i~~~~~~~ 447 (451)
..++||++++||.++.|. +++||++++|++++...
T Consensus 93 ~~~~~~~~~~~~Ig~~v~IG~~~~I~~g~~Ig~~~~IgagsvV~ 136 (192)
T 3mqg_A 93 AIERKSEYRDTIVRQGATLGANCTVVCGATIGRYAFVGAGAVVN 136 (192)
T ss_dssp TBCCGGGCCCEEECTTCEECTTCEECTTCEECTTCEECTTCEEC
T ss_pred ccccccccCCcEECCCcEECCCCEECCCCEECCCCEEcCCCEEC
Confidence 357899999999999887 58888888888887543
No 55
>3kwd_A Carbon dioxide concentrating mechanism protein; LEFT-handed beta helix, gamma carbonic anhydrase, disulfide dependent activity; 1.10A {Thermosynechococcus elongatus} PDB: 3kwe_A 3kwc_A
Probab=99.56 E-value=4.7e-14 Score=127.09 Aligned_cols=102 Identities=17% Similarity=0.145 Sum_probs=88.5
Q ss_pred CceeCCCCeeCCCcEECCCCEECCCCEECCCCEEe-----ceEECCCCEECCCcEEec---------------eEECCCC
Q 013012 345 NNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVK-----RSVIGRHCRIGSNVKVVN---------------SVVMNHV 404 (451)
Q Consensus 345 ~~~i~~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~-----~svig~~~~ig~~~~i~~---------------s~i~~~~ 404 (451)
...+++++.|++++.+++++.||++|.|+++|.|. +++||++|.|+++|.|.. ++|++++
T Consensus 39 ~~~i~~~~~I~~~a~i~~~v~IG~~~~I~~~~~I~~~~~~~v~IG~~~~Ig~~~~I~~~~~~~~ig~~~~~~~~~IG~~v 118 (213)
T 3kwd_A 39 EPEIAPTAYVHSFSNLIGDVRIKDYVHIAPGTSIRADEGTPFHIGSRTNIQDGVVIHGLQQGRVIGDDGQEYSVWIGDNV 118 (213)
T ss_dssp CCEECTTCEECTTSEEEESEEECTTCEECTTCEEEESSSCCEEECTTCEECTTCEEEECSSCCEECTTSCEESEEECTTC
T ss_pred CCcCCCCCEECCCCEEeCceEECCCCEEcCCcEEecCCCCceEECCCCEECCCCEEEecCCCceeccCCcccceEECCCc
Confidence 34567777777777777778888888888888884 479999999999999974 8999999
Q ss_pred EECCCcEEeC-eEECCCCEECCCcEEcceEECCCCEECCCCcc
Q 013012 405 TIGDGCSIQG-SVICSNAQLQERVALKDCQVLSLSTSVFLSLS 446 (451)
Q Consensus 405 ~Ig~~~~i~~-~ii~~~~~i~~~~~i~~~~ig~~~~i~~~~~~ 446 (451)
.|+.++.|.+ ++||++++||++++|.+++||++++|++++..
T Consensus 119 ~Ig~~~~I~~~v~Ig~~v~IG~~a~I~~~~Ig~~~~Igags~V 161 (213)
T 3kwd_A 119 SITHMALIHGPAYIGDGCFIGFRSTVFNARVGAGCVVMMHVLI 161 (213)
T ss_dssp EECTTCEEEEEEEECTTCEECTTCEEEEEEECTTCEECSSCEE
T ss_pred EECCCcEEcCCCEECCCCEECCCCEEeCcEECCCCEEcCCCEE
Confidence 9999999976 99999999999999999999999999998865
No 56
>3d5n_A Q97W15_sulso; NESG, SSR125, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.80A {Sulfolobus solfataricus}
Probab=99.56 E-value=6.1e-15 Score=131.27 Aligned_cols=114 Identities=19% Similarity=0.276 Sum_probs=86.6
Q ss_pred CCceEEEEecCCCCCCCCCCCCCCcccccccCCcchHHHHHHHHHHCCCcEEEEEecCchhhHHHHHhhhhhccCceeeE
Q 013012 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVE 80 (451)
Q Consensus 1 m~~~avIlAgG~g~Rl~pl~~~~~pK~llpv~gkpli~~~l~~l~~~gi~~iivv~~~~~~~~~i~~~~~~~~~~~~~~~ 80 (451)
|++.|||||||.|+|| +.||+|+|++|+|||+|+++.+..+ +++|++++. .+.+.+++. .++
T Consensus 1 M~~~~iIlAgG~g~Rm------g~~K~l~~i~g~pll~~~l~~l~~~---~ivvv~~~~--~~~~~~~~~------~~~- 62 (197)
T 3d5n_A 1 MNIGVIILAAGEGKRF------GGDKLLAKIDNTPIIMRTIRIYGDL---EKIIIVGKY--VNEMLPLLM------DQI- 62 (197)
T ss_dssp CCEEEEEECSCCTTCC------CSSGGGSBSSSSBHHHHHHHHTTTS---BCCEEECTT--HHHHGGGCT------TSC-
T ss_pred CceEEEEECCcCcccC------CCCeeeCEeCceEHHHHHHHHHHhC---CEEEEECCC--HHHHHHHhc------CCE-
Confidence 8899999999999999 3599999999999999999999776 788888754 234544432 134
Q ss_pred EEEcCC-CCChHHHHHHHHhcCCC-CcEEEEcCCc--cCCCCchHHHHHHHhcCceE
Q 013012 81 VATVPE-DVGTAGALRAIAHHLTA-KDVLVVSGDL--VSDVPPGAVTAAHRRHDAVV 133 (451)
Q Consensus 81 i~~~~~-~~gt~~~l~~~~~~l~~-~~~lvl~~D~--i~~~~~~~~l~~~~~~~~~~ 133 (451)
++..+. ..|++++++.+++.+.+ +.+++++||. +....+..+++.+ +.++++
T Consensus 63 ~v~~~~~~~G~~~si~~al~~~~~~~~vlv~~~D~P~i~~~~i~~l~~~~-~~~~~~ 118 (197)
T 3d5n_A 63 VIYNPFWNEGISTSLKLGLRFFKDYDAVLVALGDMPFVTKEDVNKIINTF-KPNCKA 118 (197)
T ss_dssp EEECTTGGGCHHHHHHHHHHHTTTSSEEEEEETTCCCSCHHHHHHHHHTC-CTTCSE
T ss_pred EEECCCCCCCHHHHHHHHHHhhccCCcEEEEeCCccccCHHHHHHHHHHh-cCCCcE
Confidence 444333 37999999999988854 5799999994 5556778888776 444443
No 57
>3r1w_A Carbonic anhydrase; beta-helix, lyase; 1.73A {Unidentified}
Probab=99.54 E-value=5.4e-14 Score=124.25 Aligned_cols=100 Identities=11% Similarity=0.117 Sum_probs=65.4
Q ss_pred ceeCCCCeeCCCcEECCCCEECCCCEECCCCEEe----ceEECCCCEECCCcEEece------------EECCCCEECCC
Q 013012 346 NIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVK----RSVIGRHCRIGSNVKVVNS------------VVMNHVTIGDG 409 (451)
Q Consensus 346 ~~i~~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~----~svig~~~~ig~~~~i~~s------------~i~~~~~Ig~~ 409 (451)
..+++++.|++++.+++++.||++|.|+++|.|. +++||++|.|++++.|..+ +|++++.||++
T Consensus 20 ~~ig~~~~I~~~~~i~~~v~IG~~~~I~~~~~i~~~~~~i~IG~~~~I~~~~~I~~~~~~~~~~~~~~~~Ig~~~~Ig~~ 99 (189)
T 3r1w_A 20 PKLGERVFVDRSSVIIGDVELGDDCSVWPLAVIRGDMHHIRIGARTSVQDGSVLHITHASDYNPGGYPLIIGDDVTIGHQ 99 (189)
T ss_dssp CEECTTCEECTTCEEEEEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECBCCSSSSTTCBCEEECSSEEECTT
T ss_pred CEECCCcEECCCCEEeeeeEECCCCEECCCCEEecCCCceEECCCCEECCCCEEecCCcccCCCCCCCeEECCCCEECCC
Confidence 3455555666666666666666666666666664 2477777777777777643 77777777777
Q ss_pred cEEeCeEECCCCEECCCcEEc-ceEECCCCEECCCCc
Q 013012 410 CSIQGSVICSNAQLQERVALK-DCQVLSLSTSVFLSL 445 (451)
Q Consensus 410 ~~i~~~ii~~~~~i~~~~~i~-~~~ig~~~~i~~~~~ 445 (451)
+.|.+++||++++|+++++|. ++.||++++|++++.
T Consensus 100 ~~i~~~~Ig~~~~Ig~~~~i~~~v~Ig~~~~Ig~~s~ 136 (189)
T 3r1w_A 100 AMLHGCTIGNRVLIGMKSMIMDGAIVEDEVIVAAGAT 136 (189)
T ss_dssp CEEESCEECSSEEECTTCEECTTCEECSSCEECTTCE
T ss_pred CEEeCcEECCCcEECCCCEEcCCCEECCCCEEccCCE
Confidence 777777777777777777665 466666666665553
No 58
>1jv1_A Glcnac1P uridyltransferase isoform 1: AGX1; nucleotidyltransferase, alternative splicing; HET: UD1; 1.90A {Homo sapiens} SCOP: c.68.1.5 PDB: 1jv3_A* 1jvg_A* 1jvd_A* 1vm8_A*
Probab=99.53 E-value=2.3e-13 Score=136.50 Aligned_cols=193 Identities=14% Similarity=0.138 Sum_probs=126.7
Q ss_pred CceEEEEecCCCCCCCCCCCCCCccccccc---CCcchHHHHHHHHHH--------CC----CcEEEEEecCchhhHHHH
Q 013012 2 DFQVVVLAGGTSKKLVPLVSKEVPKALLPV---ANRPVLSYVLEQLEL--------SN----IKDLIVVVEGADAALRVG 66 (451)
Q Consensus 2 ~~~avIlAgG~g~Rl~pl~~~~~pK~llpv---~gkpli~~~l~~l~~--------~g----i~~iivv~~~~~~~~~i~ 66 (451)
++.+||||||.|||| +...||+|+|| .|+|+|++.++++.+ .| +..+++...+. .+.+.
T Consensus 102 kvavViLAGG~GTRL----g~~~PK~l~pv~~~~gk~~le~~~e~l~~lq~la~~~~G~~~~ip~vImtS~~t--~e~t~ 175 (505)
T 1jv1_A 102 KVAVLLLAGGQGTRL----GVAYPKGMYDVGLPSRKTLFQIQAERILKLQQVAEKYYGNKCIIPWYIMTSGRT--MESTK 175 (505)
T ss_dssp CEEEEEECCCCCCTT----SCSSCGGGCCCCCTTCCCHHHHHHHHHHHHHHHHHHHHSSCCCCCEEEEECTTT--HHHHH
T ss_pred ceEEEEEcCCccccC----CCCCCCccceeecCCCCcHHHHHHHHHHHHHHHHHHhcCCCccceEEEEecCCC--HHHHH
Confidence 478999999999999 67899999999 799999999999876 25 55555544432 34677
Q ss_pred Hhhhhh--cc-CceeeEEEEc---------------------CCCCChHHHHHHHHh-----cC---CCCcEEEEcCCcc
Q 013012 67 GWISAA--YV-DRLHVEVATV---------------------PEDVGTAGALRAIAH-----HL---TAKDVLVVSGDLV 114 (451)
Q Consensus 67 ~~~~~~--~~-~~~~~~i~~~---------------------~~~~gt~~~l~~~~~-----~l---~~~~~lvl~~D~i 114 (451)
+|+.+. +. ++-.+.+..+ ..+.|+++.++.+.. .+ ..++++|+++|.+
T Consensus 176 ~~f~~~~~fGl~~~~I~~f~Q~~~P~i~~~g~~~l~~~~~~e~~P~GtGG~~~~L~~sg~L~~l~~~g~e~~~V~n~Dn~ 255 (505)
T 1jv1_A 176 EFFTKHKYFGLKKENVIFFQQGMLPAMSFDGKIILEEKNKVSMAPDGNGGLYRALAAQNIVEDMEQRGIWSIHVYCVDNI 255 (505)
T ss_dssp HHHHHTGGGGSCGGGEEEEECCEEECEETTSCBCEEETTEECEEECCGGGHHHHHHHTTHHHHHHHTTCCEEEEEETTBT
T ss_pred HHHHhhhhcCCCcCceEEEEecceEEEcCCCcccccCCcccccCCCCchHHHHHHHHcCcHHHHHhcCCCEEEEEECCcc
Confidence 777542 21 1112443332 235789888876532 21 2478999999974
Q ss_pred -CCCCchHHHHHHHhcCceEEEEEeeeccCCCccCCCCCCcccCCCCCcccEEEecCCCc-eEEEeeccccccccccccH
Q 013012 115 -SDVPPGAVTAAHRRHDAVVTAMICSVPVSGLSEAGSSGAKDKTKKPGRYNIIGMDPTKQ-FLLHIATGAELEKDTRIRK 192 (451)
Q Consensus 115 -~~~~~~~~l~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~-~l~~~~~~~~~ek~~~i~~ 192 (451)
...+...++.+|.++++++++.+.+.. ..+..+|++..++ ++ .+..+. +++.
T Consensus 256 L~~~~d~~~lg~~~~~~~~~~~~v~~k~----------------~~~e~~Gvl~~~d-g~~~vvEy~-----E~p~---- 309 (505)
T 1jv1_A 256 LVKVADPRFIGFCIQKGADCGAKVVEKT----------------NPTEPVGVVCRVD-GVYQVVEYS-----EISL---- 309 (505)
T ss_dssp TCCTTCHHHHHHHHHTTCSEEEEEEECC----------------STTCSCCEEEEET-TEEEEECGG-----GSCH----
T ss_pred ccccchHHHHHHHHHcCCCEEEEEEEcc----------------CCccCcceEEEEC-CeEEEEEEe-----eCCH----
Confidence 777788999999999999998776421 1245678877653 33 222232 2211
Q ss_pred HHHh-hcCeeEEecCCccceEEeechHHHHHHHhc
Q 013012 193 SILR-AVGQMDIRADLMDAHMYAFNRSVLQEVLDQ 226 (451)
Q Consensus 193 ~~~~-~~~~~~~~s~l~~~giYi~~~~~l~~~~~~ 226 (451)
.... ..+.-....+..|+|+|+|+.++|+.+.+.
T Consensus 310 ~~~~~~~~~g~~~~~~~N~~~~~f~l~~L~~i~~~ 344 (505)
T 1jv1_A 310 ATAQKRSSDGRLLFNAGNIANHFFTVPFLRDVVNV 344 (505)
T ss_dssp HHHHCBCTTSSBSSCEEEEEEEEEEHHHHHHHHHT
T ss_pred HHhhhcccccccccceeeEEEEEecHHHHHHHHHh
Confidence 1110 000011234688999999999999887653
No 59
>3vbi_A ANTD, galactoside O-acetyltransferase; anthrose, acylated sugar, LEFT-handed beta helix, sugar N-AC transferase; HET: COA 0FX; 1.80A {Bacillus cereus} PDB: 3vbj_A* 3vbm_A* 3vbk_A* 3vbp_A* 3vbl_A* 3vbn_A*
Probab=99.53 E-value=3.2e-14 Score=127.40 Aligned_cols=101 Identities=9% Similarity=0.140 Sum_probs=73.5
Q ss_pred eeCCCCeeCCCcEECC--CCEECCCCEECCCCEEe-ceEECCCCEECCCcEEe----ceEECCCCEECCCcEE-------
Q 013012 347 IIHPSAELGSKTTVGP--HCMLGEGSQMGDKCSVK-RSVIGRHCRIGSNVKVV----NSVVMNHVTIGDGCSI------- 412 (451)
Q Consensus 347 ~i~~~~~i~~~~~i~~--~~~i~~~~~i~~~~~i~-~svig~~~~ig~~~~i~----~s~i~~~~~Ig~~~~i------- 412 (451)
.+++++.|++++.|.. ++.||++|.|+++|.|. +++||++|.|++++.|. +++|+++|.||++|.|
T Consensus 34 ~ig~~~~I~~~~~i~~~~~v~IG~~~~I~~~~~I~~~v~IG~~~~I~~~~~I~~~~~~~~IG~~~~Ig~~~~I~~~~~~~ 113 (205)
T 3vbi_A 34 SVGKNVLISKKASIYNPGVISIGNNVRIDDFCILSGKVTIGSYSHIAAYTALYGGEVGIEMYDFANISSRTIVYAAIDDF 113 (205)
T ss_dssp EECSSEEEBTTSEEESGGGEEECSSEEECTTCEEEEEEEECSSEEECTTCEEEEEEEEEEECTTCEECTTCEEESEECCC
T ss_pred EECCCCEECCCeEEccCCeeEECCCCEECCCCEEccceEECCCCEECCCeEEEcCCccEEECCCCEECCCcEEEeCCCCc
Confidence 3455555555555544 56677777777777776 57888888888888883 4888888888888888
Q ss_pred -------------------eCeEECCCCEECCCcEEc-ceEECCCCEECCCCccC
Q 013012 413 -------------------QGSVICSNAQLQERVALK-DCQVLSLSTSVFLSLSS 447 (451)
Q Consensus 413 -------------------~~~ii~~~~~i~~~~~i~-~~~ig~~~~i~~~~~~~ 447 (451)
++++||++|.||.++.|. ++.||++++|++++...
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~v~IG~~v~IG~~~~I~~gv~Ig~~~~Ig~gsvV~ 168 (205)
T 3vbi_A 114 SGNALMGPTIPNQYKNVKTGKVILKKHVIIGAHSIIFPNVVIGEGVAVGAMSMVK 168 (205)
T ss_dssp SSSSCCSTTSCGGGCCCEECCEEECTTCEECTTCEECSSCEECTTCEECTTCEEC
T ss_pred ccccccCcccccccceeccCCEEECCCCEECCCCEEcCCCEECCCCEEcCCCEEC
Confidence 467888888888888887 57888888887777443
No 60
>1qre_A Carbonic anhydrase; beta-helix, lyase; 1.46A {Methanosarcina thermophila} SCOP: b.81.1.5 PDB: 1qq0_A 1qrf_A 1qrg_A 1qrm_A 1qrl_A 1thj_A 3otm_A 3ow5_A 3ou9_A 3otz_A 3oup_A
Probab=99.52 E-value=1.7e-13 Score=126.25 Aligned_cols=102 Identities=15% Similarity=0.137 Sum_probs=76.8
Q ss_pred CceeCCCCeeCCCcEECCCC----EECCCCEECCCCEEe------------------------ceEECCCCEECCCcEEe
Q 013012 345 NNIIHPSAELGSKTTVGPHC----MLGEGSQMGDKCSVK------------------------RSVIGRHCRIGSNVKVV 396 (451)
Q Consensus 345 ~~~i~~~~~i~~~~~i~~~~----~i~~~~~i~~~~~i~------------------------~svig~~~~ig~~~~i~ 396 (451)
+..|++++.|++++.|.+++ .||++|.|+++|.|. +++||++|.||++|.|.
T Consensus 77 ~v~IG~~~~I~~~~~I~~~~~~~i~IG~~~~Ig~~~~I~~~~~~~~~g~~~~~~~~~~~~~~~~v~IG~~v~Ig~~~~I~ 156 (247)
T 1qre_A 77 EVTIGANVMVSPMASIRSDEGMPIFVGDRSNVQDGVVLHALETINEEGEPIEDNIVEVDGKEYAVYIGNNVSLAHQSQVH 156 (247)
T ss_dssp SEEECTTCEECTTCEEEESSSCCEEECTTCEECTTCEEEECCSBCTTSCBCGGGCEEETTEEESEEECTTCEECTTCEEE
T ss_pred CcEECCCCEECCCcEEecCCCCCEEECCCCEECCCeEEEecccccccCcccccceeeccCccCceEECCCCEECCCCEEc
Confidence 33444444444444443322 677777777777775 37899999999999998
Q ss_pred c-eEECCCCEECCCcEEeCeEECCCCEECCCcEEcceEECCCCEECCCCcc
Q 013012 397 N-SVVMNHVTIGDGCSIQGSVICSNAQLQERVALKDCQVLSLSTSVFLSLS 446 (451)
Q Consensus 397 ~-s~i~~~~~Ig~~~~i~~~ii~~~~~i~~~~~i~~~~ig~~~~i~~~~~~ 446 (451)
+ ++|+++|.||.++.|.++.||++++|+++++|.++.|++++++++++..
T Consensus 157 ~~~~Ig~~v~IG~~a~I~~v~Ig~~~~IgagsvV~~~~I~~~~~v~~g~vv 207 (247)
T 1qre_A 157 GPAAVGDDTFIGMQAFVFKSKVGNNCVLEPRSAAIGVTIPDGRYIPAGMVV 207 (247)
T ss_dssp EEEEECTTCEECTTCEEEEEEECTTCEECTTCEEESCEECTTBEECTTCEE
T ss_pred CCcEECCCCEECCCCEEeceEECCCCEECCCCEECCeEeCCCCEECCCCEE
Confidence 7 8999999999999886689999999999999866888888888877643
No 61
>1e5k_A Molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin nucleotidyl-transferase,; HET: CIT; 1.35A {Escherichia coli} SCOP: c.68.1.8 PDB: 1h4e_A* 1hjl_A* 1hjj_A* 1h4c_A* 1h4d_A* 1fr9_A 1frw_A*
Probab=99.51 E-value=4.2e-14 Score=126.15 Aligned_cols=108 Identities=19% Similarity=0.247 Sum_probs=83.9
Q ss_pred CCceEEEEecCCCCCCCCCCCCCCcccccccCCcchHHHHHHHHHHCCCcEEEEEecCchhhHHHHHhhhhhccCceeeE
Q 013012 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVE 80 (451)
Q Consensus 1 m~~~avIlAgG~g~Rl~pl~~~~~pK~llpv~gkpli~~~l~~l~~~gi~~iivv~~~~~~~~~i~~~~~~~~~~~~~~~ 80 (451)
|++.+||||||.|+|| . +.||+|+|++|+|||+|+++.+.. ++++|+|++++.. +.+ . . .++.
T Consensus 5 m~~~~iILAgG~s~Rm----g-~~~K~ll~i~G~pli~~~l~~l~~-~~~~ivvv~~~~~--~~~---~-~-----~~~~ 67 (201)
T 1e5k_A 5 TTITGVVLAGGKARRM----G-GVDKGLLELNGKPLWQHVADALMT-QLSHVVVNANRHQ--EIY---Q-A-----SGLK 67 (201)
T ss_dssp CSEEEEEECCCCCSSS----C-SSCGGGSEETTEEHHHHHHHHHHH-HCSCEEEECSSSH--HHH---H-T-----TSCC
T ss_pred CcceEEEEcCCCCCcC----C-CCCCceeeECceeHHHHHHHHHHh-hCCEEEEEcCCcH--HHH---h-h-----cCCe
Confidence 4689999999999999 2 379999999999999999999985 5899999987542 122 1 1 1244
Q ss_pred EEEcCC-C-CChHHHHHHHHhcCCCCcEEEEcCCc--cCCCCchHHHHH
Q 013012 81 VATVPE-D-VGTAGALRAIAHHLTAKDVLVVSGDL--VSDVPPGAVTAA 125 (451)
Q Consensus 81 i~~~~~-~-~gt~~~l~~~~~~l~~~~~lvl~~D~--i~~~~~~~~l~~ 125 (451)
++..+. . .|++++++.+++.+..+.+++++||. +....+..+++.
T Consensus 68 ~v~~~~~~~~G~~~si~~~l~~~~~~~vlv~~~D~P~i~~~~i~~l~~~ 116 (201)
T 1e5k_A 68 VIEDSLADYPGPLAGMLSVMQQEAGEWFLFCPCDTPYIPPDLAARLNHQ 116 (201)
T ss_dssp EECCCTTCCCSHHHHHHHHHHHCCSSEEEEEETTCTTCCTTHHHHHHHT
T ss_pred EEecCCCCCCCHHHHHHHHHHhCCCCcEEEEeCCcCcCCHHHHHHHHhh
Confidence 443332 2 69999999999888767799999994 666677888765
No 62
>1qre_A Carbonic anhydrase; beta-helix, lyase; 1.46A {Methanosarcina thermophila} SCOP: b.81.1.5 PDB: 1qq0_A 1qrf_A 1qrg_A 1qrm_A 1qrl_A 1thj_A 3otm_A 3ow5_A 3ou9_A 3otz_A 3oup_A
Probab=99.50 E-value=2.6e-13 Score=125.00 Aligned_cols=105 Identities=12% Similarity=0.198 Sum_probs=90.3
Q ss_pred cCCCceeCCCCeeCCCcEECCCCEECCCCEECCCCEEec-----eEECCCCEECCCcEEe--------------------
Q 013012 342 SAQNNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVKR-----SVIGRHCRIGSNVKVV-------------------- 396 (451)
Q Consensus 342 ~~~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~~-----svig~~~~ig~~~~i~-------------------- 396 (451)
.+....+++++.|++++.|.+++.||++|.|+++|.|.. .+||++|.|+++|.|.
T Consensus 56 ~~~~~~I~~~~~I~~~a~I~g~v~IG~~~~I~~~~~I~~~~~~~i~IG~~~~Ig~~~~I~~~~~~~~~g~~~~~~~~~~~ 135 (247)
T 1qre_A 56 EPSAPVIDPTAYIDPQASVIGEVTIGANVMVSPMASIRSDEGMPIFVGDRSNVQDGVVLHALETINEEGEPIEDNIVEVD 135 (247)
T ss_dssp SCCCCEECTTCEECTTCEEEESEEECTTCEECTTCEEEESSSCCEEECTTCEECTTCEEEECCSBCTTSCBCGGGCEEET
T ss_pred cCCCcEECCCcEECCCCEEeCCcEECCCCEECCCcEEecCCCCCEEECCCCEECCCeEEEecccccccCcccccceeecc
Confidence 344566788888888888877888889999999888874 3899999999999996
Q ss_pred ----ceEECCCCEECCCcEEeC-eEECCCCEECCCcEEcceEECCCCEECCCCcc
Q 013012 397 ----NSVVMNHVTIGDGCSIQG-SVICSNAQLQERVALKDCQVLSLSTSVFLSLS 446 (451)
Q Consensus 397 ----~s~i~~~~~Ig~~~~i~~-~ii~~~~~i~~~~~i~~~~ig~~~~i~~~~~~ 446 (451)
+++|++++.||++|.|.+ ++||++++||.++.|.++.||++++|++++..
T Consensus 136 ~~~~~v~IG~~v~Ig~~~~I~~~~~Ig~~v~IG~~a~I~~v~Ig~~~~IgagsvV 190 (247)
T 1qre_A 136 GKEYAVYIGNNVSLAHQSQVHGPAAVGDDTFIGMQAFVFKSKVGNNCVLEPRSAA 190 (247)
T ss_dssp TEEESEEECTTCEECTTCEEEEEEEECTTCEECTTCEEEEEEECTTCEECTTCEE
T ss_pred CccCceEECCCCEECCCCEEcCCcEECCCCEECCCCEEeceEECCCCEECCCCEE
Confidence 389999999999999987 99999999999999877888888888888754
No 63
>1vpa_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; TM1393, JCSG, joint center for structural GENO PSI, protein structure initiative; HET: CTP; 2.67A {Thermotoga maritima} SCOP: c.68.1.13
Probab=99.49 E-value=7.6e-14 Score=127.65 Aligned_cols=119 Identities=20% Similarity=0.246 Sum_probs=86.3
Q ss_pred CceEEEEecCCCCCCCCCCCCCCcccccccCCcchHHHHHHHHHHCC-CcEEEEEecCchhhHHHHHhhhhhccCceeeE
Q 013012 2 DFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSN-IKDLIVVVEGADAALRVGGWISAAYVDRLHVE 80 (451)
Q Consensus 2 ~~~avIlAgG~g~Rl~pl~~~~~pK~llpv~gkpli~~~l~~l~~~g-i~~iivv~~~~~~~~~i~~~~~~~~~~~~~~~ 80 (451)
++.|||||||.|+|| ....||+|+|++|+|||+|+++.+.+++ +++++|++++.. .+.+.+++. + . ..
T Consensus 13 ~~~aiILAaG~s~Rm----~~~~~K~l~~i~Gkpli~~~i~~l~~~~~~~~ivVv~~~~~-~~~~~~~~~--~-~---~~ 81 (234)
T 1vpa_A 13 MNVAILLAAGKGERM----SENVPKQFLEIEGRMLFEYPLSTFLKSEAIDGVVIVTRREW-FEVVEKRVF--H-E---KV 81 (234)
T ss_dssp CEEEEEEECCCCGGG----CCSSCGGGCEETTEETTHHHHHHHHHCTTCSEEEEEECGGG-HHHHHTTCC--C-T---TE
T ss_pred cCeEEEEcCcchhhc----CCCCCceEEEECCeEHHHHHHHHHHcCCCCCeEEEEEChHH-HHHHHHHhc--c-C---Cc
Confidence 378999999999999 4456999999999999999999999988 899999998542 112233322 1 1 12
Q ss_pred EEEcCCCCChHHHHHHHHhcCC---CCcEEEEcCC--ccCCCCchHHHHHHHhcCc
Q 013012 81 VATVPEDVGTAGALRAIAHHLT---AKDVLVVSGD--LVSDVPPGAVTAAHRRHDA 131 (451)
Q Consensus 81 i~~~~~~~gt~~~l~~~~~~l~---~~~~lvl~~D--~i~~~~~~~~l~~~~~~~~ 131 (451)
+.......+..++++.+++.+. .+.+++++|| ++....+..+++.+.+.++
T Consensus 82 ~~~~~gg~~~~~sv~~al~~~~~~~~~~vlv~~~D~Pli~~~~i~~l~~~~~~~~~ 137 (234)
T 1vpa_A 82 LGIVEGGDTRSQSVRSALEFLEKFSPSYVLVHDSARPFLRKKHVSEVLRRARETGA 137 (234)
T ss_dssp EEEEECCSSHHHHHHHHHHHHGGGCCSEEEEEETTSCCCCHHHHHHHHHHHHHHSE
T ss_pred eEEeCCCCcHHHHHHHHHHHhhhcCCCEEEEecCcccCCCHHHHHHHHHHHHhcCC
Confidence 2222233457788888876652 3457888899 5666688999998876544
No 64
>3r0s_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; structural genomics; 2.30A {Campylobacter jejuni subsp} SCOP: b.81.1.0
Probab=99.49 E-value=5.4e-13 Score=124.26 Aligned_cols=111 Identities=12% Similarity=0.106 Sum_probs=62.4
Q ss_pred cCCccccCCCceeCCCCeeCCCcEECCCCEECCCCEECCCCEE--------------eceEECCCCEECCCcEEec----
Q 013012 336 LSGYNFSAQNNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSV--------------KRSVIGRHCRIGSNVKVVN---- 397 (451)
Q Consensus 336 ~~~~~~~~~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~~~~~i--------------~~svig~~~~ig~~~~i~~---- 397 (451)
+.++.++.+++.|++++.|++++.|.+++.||++|.|++++.| .+++||++|.|+++++|..
T Consensus 25 I~~~~~I~~~v~IG~~~~I~~~~~I~g~~~IG~~~~I~~~a~I~~~~~~~~~~g~~~~~v~IG~~~~Ig~~~~I~~~~~~ 104 (266)
T 3r0s_A 25 IEAYAYVSKDAKIGNNVVIKQGARILSDTTIGDHSRVFSYAIVGDIPQDISYKEEQKSGVVIGKNATIREFATINSGTAK 104 (266)
T ss_dssp ECTTCEECTTCEECTTCEECTTCEECSSCEECTTCEECTTCEEEECCSCSCCC----CEEEECTTCEECTTCEEECCCTT
T ss_pred ECCCCEECCCCEECCCCEEcCCeEEeCCcEECCCcEEccCceeccCCccccccCCcCceEEECCCCEECCceEecCCccc
Confidence 3333444445555555555555555556666666666666666 3566666666666666642
Q ss_pred ----eEECCCCEECCCcE------------------Ee-CeEECCCCEECCCcEEc-ceEECCCCEECCCCcc
Q 013012 398 ----SVVMNHVTIGDGCS------------------IQ-GSVICSNAQLQERVALK-DCQVLSLSTSVFLSLS 446 (451)
Q Consensus 398 ----s~i~~~~~Ig~~~~------------------i~-~~ii~~~~~i~~~~~i~-~~~ig~~~~i~~~~~~ 446 (451)
++|++++.|+.++. +. ++.||++++|+.++.|. ++.||++++|++++..
T Consensus 105 ~~~~~~IG~~~~I~~~~~I~~~~~IG~~~~i~~~~~i~~~v~Igd~~~Ig~~a~V~~~v~Ig~~a~Vg~~s~V 177 (266)
T 3r0s_A 105 GDGFTRIGDNAFIMAYCHIAHDCLLGNNIILANNATLAGHVELGDFTVVGGLTPIHQFVKVGEGCMIAGASAL 177 (266)
T ss_dssp TTSEEEECTTCEECTTCEECTTCEECSSCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSSCBB
T ss_pred CCccEEECCCceeCCcceEccccccCCCeEECCCceecCCeEECCCcEEccCCEECCCcEECCCCEEccCCeE
Confidence 44444444444443 32 35566666666666665 3666666666666643
No 65
>1j2z_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; UDP-N-acetylglucosamine acyltransferase, LPXA, LEFT-handed B structure; HET: SOG TLA; 2.10A {Helicobacter pylori} SCOP: b.81.1.1
Probab=99.48 E-value=5.6e-13 Score=124.26 Aligned_cols=32 Identities=9% Similarity=-0.135 Sum_probs=17.2
Q ss_pred eEECCCCEECCCcEEc-ceEECCCCEECCCCcc
Q 013012 415 SVICSNAQLQERVALK-DCQVLSLSTSVFLSLS 446 (451)
Q Consensus 415 ~ii~~~~~i~~~~~i~-~~~ig~~~~i~~~~~~ 446 (451)
+.||+++.|+.++.|. ++.||++++|++++..
T Consensus 141 v~Igd~~~Ig~~a~V~~~v~IG~~a~Ig~~s~V 173 (270)
T 1j2z_A 141 IEIGDYVNIGGLTAIHQFVRIAKGCMIAGKSAL 173 (270)
T ss_dssp CEECSSCEECTTCEECTTCEECTTCEECTTCEE
T ss_pred cEECCCeEEecCCEECCCcEeCCceEEecCcEe
Confidence 4445555555555554 3566666666666543
No 66
>3r0s_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; structural genomics; 2.30A {Campylobacter jejuni subsp} SCOP: b.81.1.0
Probab=99.48 E-value=6.9e-13 Score=123.54 Aligned_cols=106 Identities=16% Similarity=0.168 Sum_probs=83.0
Q ss_pred cccCCCceeCCCCeeCCCcEECCCCEECCCCEECCCCEEe-ceEECCCCEECCCcEE--------------eceEECCCC
Q 013012 340 NFSAQNNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVK-RSVIGRHCRIGSNVKV--------------VNSVVMNHV 404 (451)
Q Consensus 340 ~~~~~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~-~svig~~~~ig~~~~i--------------~~s~i~~~~ 404 (451)
.++++++.+++++.|++.++|++++.||++|.|++++.|. ++.||++|.|++++.| .+++|++++
T Consensus 11 a~I~~~a~Ig~~v~I~~~~~I~~~v~IG~~~~I~~~~~I~g~~~IG~~~~I~~~a~I~~~~~~~~~~g~~~~~v~IG~~~ 90 (266)
T 3r0s_A 11 AVIEEGAQLGDDVVIEAYAYVSKDAKIGNNVVIKQGARILSDTTIGDHSRVFSYAIVGDIPQDISYKEEQKSGVVIGKNA 90 (266)
T ss_dssp CEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSSCEECTTCEECTTCEEEECCSCSCCC----CEEEECTTC
T ss_pred CEECCCCEECCCCEECCCCEECCCCEECCCCEEcCCeEEeCCcEECCCcEEccCceeccCCccccccCCcCceEEECCCC
Confidence 3445566777777777777777788888888888888887 6999999999999999 589999999
Q ss_pred EECCCcEEeC--------eEECCCCEECCCcEEc-ceEECCCCEECCCCc
Q 013012 405 TIGDGCSIQG--------SVICSNAQLQERVALK-DCQVLSLSTSVFLSL 445 (451)
Q Consensus 405 ~Ig~~~~i~~--------~ii~~~~~i~~~~~i~-~~~ig~~~~i~~~~~ 445 (451)
.|++++.|.. ++||+++.|++++.+. +|.||+++.+++++.
T Consensus 91 ~Ig~~~~I~~~~~~~~~~~~IG~~~~I~~~~~I~~~~~IG~~~~i~~~~~ 140 (266)
T 3r0s_A 91 TIREFATINSGTAKGDGFTRIGDNAFIMAYCHIAHDCLLGNNIILANNAT 140 (266)
T ss_dssp EECTTCEEECCCTTTTSEEEECTTCEECTTCEECTTCEECSSCEECTTCE
T ss_pred EECCceEecCCcccCCccEEECCCceeCCcceEccccccCCCeEECCCce
Confidence 9999999963 7788887777777764 466666666655543
No 67
>4eqy_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; ssgcid, beta helix, structural genomics, seattle structural center for infectious disease, transferase; 1.80A {Burkholderia thailandensis}
Probab=99.48 E-value=5.6e-13 Score=125.32 Aligned_cols=105 Identities=20% Similarity=0.170 Sum_probs=52.2
Q ss_pred cccCCCceeCCCCeeCCCcEECCCCEECCCCEECCCCEE-------------eceEECCCCEECCCcEEec--------e
Q 013012 340 NFSAQNNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSV-------------KRSVIGRHCRIGSNVKVVN--------S 398 (451)
Q Consensus 340 ~~~~~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~~~~~i-------------~~svig~~~~ig~~~~i~~--------s 398 (451)
+.+.+++.|+.++.|+++++|.+++.||++|.|+++|.| .+++||++|.|+++|+|.. +
T Consensus 47 ~~I~~~v~IG~~~~I~~~~~I~~~~~IG~~~~I~~~a~Ig~~~~~~~~~g~~~~v~IG~~~~Ig~~~~I~~g~~~~~~~~ 126 (283)
T 4eqy_A 47 AIVGSNVTIGARTTIGSHSVIEGHTTIGEDNRIGHYASVGGRPQDMKYKDEPTRLVIGDRNTIREFTTIHTGTVQDAGVT 126 (283)
T ss_dssp CEECTTEEECTTCEECTTCEECSEEEECSSCEECTTEEEEECCCCTTCCCCCCEEEECSSCEECTTEEEECCCTTTTSEE
T ss_pred CEECCCCEECCCCEECCCCEECCCcEECCCcEEcCCcEECCCCccccccCCCceEEECCCcccCcceeEccceecCCCce
Confidence 333344444444444444444445555555555555555 2455666666666666642 5
Q ss_pred EECCCCEECCCcEE-eC------------------eEECCCCEECCCcEEc-ceEECCCCEECCCC
Q 013012 399 VVMNHVTIGDGCSI-QG------------------SVICSNAQLQERVALK-DCQVLSLSTSVFLS 444 (451)
Q Consensus 399 ~i~~~~~Ig~~~~i-~~------------------~ii~~~~~i~~~~~i~-~~~ig~~~~i~~~~ 444 (451)
+|++++.|+.++.| .+ +.||++++|+.++.|. ++.||++++|++++
T Consensus 127 ~IG~~~~I~~~~~I~~~~~IG~~v~i~~~~~i~~~v~Igd~~~Ig~~a~V~~~v~Ig~~~vvg~~s 192 (283)
T 4eqy_A 127 TLGDDNWIMAYVHIGHDCRVGSHVVLSSNAQMAGHVEIGDWAIVGGMSGVHQYVRIGAHSMLGGAS 192 (283)
T ss_dssp EECSSCEECTTCEECTTCEECSSCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTC
T ss_pred EECCCcEECceeEEcCCcEECCCcEECCCceEcCCcEECCCeEEecCCEEcCCeEECCCcEECCCC
Confidence 55555544444444 23 4444444444444444 24455555555544
No 68
>1xhd_A Putative acetyltransferase/acyltransferase; structural genomics, protein structure initiative, medwest C structural genomics, MCSG; 1.90A {Bacillus cereus} SCOP: b.81.1.5 PDB: 3vnp_A 2eg0_A
Probab=99.48 E-value=2.7e-13 Score=117.90 Aligned_cols=102 Identities=13% Similarity=0.205 Sum_probs=86.6
Q ss_pred CCceeCCCCeeCCCcEECCC---CEECCCCEECCCCEEe-----ceEECCCCEECCCcEEeceEECCCCEECCCcEEe-C
Q 013012 344 QNNIIHPSAELGSKTTVGPH---CMLGEGSQMGDKCSVK-----RSVIGRHCRIGSNVKVVNSVVMNHVTIGDGCSIQ-G 414 (451)
Q Consensus 344 ~~~~i~~~~~i~~~~~i~~~---~~i~~~~~i~~~~~i~-----~svig~~~~ig~~~~i~~s~i~~~~~Ig~~~~i~-~ 414 (451)
++..|++++.|++++.|.++ +.||++|.|+++|.|. +++||++|.|++++.|.+++|++++.||.++.|. +
T Consensus 29 ~~v~IG~~~~I~~~~~i~~~~~~v~IG~~~~I~~~~~I~~~~~~~~~Ig~~~~Ig~~~~i~~~~Ig~~~~Ig~~~~i~~~ 108 (173)
T 1xhd_A 29 GDVYVGEESSIWFNTVIRGDVSPTIIGDRVNVQDQCTLHQSPQYPLILEDDVTVGHQVILHSCHIKKDALIGMGSIILDG 108 (173)
T ss_dssp EEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECCTTCCEEECTTCEECTTCEEESCEECTTCEECTTCEECTT
T ss_pred CCEEECCCcEEcCCcEEecCCCeEEECCCCEECCCCEEEeCCCCCeEECCCCEECCCCEEeCCEECCCCEEcCCCEEcCC
Confidence 45566667777777666544 7789999999999998 7999999999999999999999999999999985 7
Q ss_pred eEECCCCEECCCcEEc-ceEECCCCEE-CCCCc
Q 013012 415 SVICSNAQLQERVALK-DCQVLSLSTS-VFLSL 445 (451)
Q Consensus 415 ~ii~~~~~i~~~~~i~-~~~ig~~~~i-~~~~~ 445 (451)
+.||+++.|++++.|. +..|++++++ +..++
T Consensus 109 ~~Ig~~~~Ig~~s~V~~~~~i~~~~vv~G~pa~ 141 (173)
T 1xhd_A 109 AEIGEGAFIGAGSLVSQGKKIPPNTLAFGRPAK 141 (173)
T ss_dssp CEECTTCEECTTCEECTTCEECTTEEEEETTEE
T ss_pred CEECCCCEECCCCEECCCcEeCCCCEEECCCCE
Confidence 9999999999999998 4889999888 44443
No 69
>2qia_A UDP-N-acetylglucosamine acyltransferase; LEFT-handed parallel beta helix; HET: U20; 1.74A {Escherichia coli K12} SCOP: b.81.1.1 PDB: 1lxa_A 2jf3_A* 2aq9_A* 2qiv_X* 2jf2_A
Probab=99.48 E-value=7.7e-13 Score=123.09 Aligned_cols=102 Identities=19% Similarity=0.114 Sum_probs=48.7
Q ss_pred CCceeCCCCeeCCCcEECCCCEECCCCEECCCCEEe-------------ceEECCCCEECCCcEEec--------eEECC
Q 013012 344 QNNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVK-------------RSVIGRHCRIGSNVKVVN--------SVVMN 402 (451)
Q Consensus 344 ~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~-------------~svig~~~~ig~~~~i~~--------s~i~~ 402 (451)
+++.|++++.|+++++|++++.||++|.|+++|.|. +++||++|.|+++++|.. ++|++
T Consensus 34 ~~v~IG~~~~I~~~~~I~~~~~IG~~~~I~~~~~I~~~~~~~~~~g~~~~~~IG~~~~Ig~~~~I~~~~~~~~~~~~IG~ 113 (262)
T 2qia_A 34 PHVEIGEGTVLKSHVVVNGHTKIGRDNEIYQFASIGEVNQDLKYAGEPTRVEIGDRNRIRESVTIHRGTVQGGGLTKVGS 113 (262)
T ss_dssp TTEEECTTCEECSSCEECSEEEECSSCEECTTCEEEECCSCTTCCSCCCEEEECSSCEECTTCEEECCCTTTTSEEEECS
T ss_pred CCCEECCCcEECCCCEECCCcEECCCCEEecceEECcCCccccccCCccceEECCCceeCCCCEEcCCccCCCCcCEECC
Confidence 344444444444444444444455555555555553 345555555555555531 45555
Q ss_pred CCEECCCcEE-eC------------------eEECCCCEECCCcEEc-ceEECCCCEECCCCc
Q 013012 403 HVTIGDGCSI-QG------------------SVICSNAQLQERVALK-DCQVLSLSTSVFLSL 445 (451)
Q Consensus 403 ~~~Ig~~~~i-~~------------------~ii~~~~~i~~~~~i~-~~~ig~~~~i~~~~~ 445 (451)
++.|+.++.| .+ +.||+++.|+.++.|. ++.||++++|++++.
T Consensus 114 ~~~Ig~~~~I~~~~~Ig~~~~i~~~~~i~~~v~Ig~~~~Ig~~~~I~~~v~Ig~~~~ig~~s~ 176 (262)
T 2qia_A 114 DNLLMINAHIAHDCTVGNRCILANNATLAGHVSVDDFAIIGGMTAVHQFCIIGAHVMVGGCSG 176 (262)
T ss_dssp SCEECTTCEECTTCEECSSCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSSCE
T ss_pred CcEEeeeeEECCCCEECCCeEECCcccccCCcEECCCcEEccCCEECCCCEECCCCEEccCCE
Confidence 5444444444 12 3344444444444444 355555555555553
No 70
>4eqy_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; ssgcid, beta helix, structural genomics, seattle structural center for infectious disease, transferase; 1.80A {Burkholderia thailandensis}
Probab=99.47 E-value=4.4e-13 Score=126.01 Aligned_cols=105 Identities=21% Similarity=0.320 Sum_probs=81.2
Q ss_pred ccCCCceeCCCCeeCCCcEECCCCEECCCCEECCCCEEe-ceEECCCCEECCCcEEe-------------ceEECCCCEE
Q 013012 341 FSAQNNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVK-RSVIGRHCRIGSNVKVV-------------NSVVMNHVTI 406 (451)
Q Consensus 341 ~~~~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~-~svig~~~~ig~~~~i~-------------~s~i~~~~~I 406 (451)
.+.+++.+++++.|+++++|++++.||++|.|+++|.|. +++||++|.|+++|.|+ +++|++++.|
T Consensus 30 ~I~~~a~ig~~v~Ig~~~~I~~~v~IG~~~~I~~~~~I~~~~~IG~~~~I~~~a~Ig~~~~~~~~~g~~~~v~IG~~~~I 109 (283)
T 4eqy_A 30 IIEPGAQLHETVEVGPYAIVGSNVTIGARTTIGSHSVIEGHTTIGEDNRIGHYASVGGRPQDMKYKDEPTRLVIGDRNTI 109 (283)
T ss_dssp EECTTCEECTTCEECTTCEECTTEEECTTCEECTTCEECSEEEECSSCEECTTEEEEECCCCTTCCCCCCEEEECSSCEE
T ss_pred EECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCcEECCCcEEcCCcEECCCCccccccCCCceEEECCCccc
Confidence 344566666777777777777777788888888888887 58999999999999993 7899999999
Q ss_pred CCCcEEeC--------eEECCCCEECCCcEEc-ceEECCCCEECCCCc
Q 013012 407 GDGCSIQG--------SVICSNAQLQERVALK-DCQVLSLSTSVFLSL 445 (451)
Q Consensus 407 g~~~~i~~--------~ii~~~~~i~~~~~i~-~~~ig~~~~i~~~~~ 445 (451)
+++|.|.. ++||+++.|++++.|. +|+||+++.++.++.
T Consensus 110 g~~~~I~~g~~~~~~~~~IG~~~~I~~~~~I~~~~~IG~~v~i~~~~~ 157 (283)
T 4eqy_A 110 REFTTIHTGTVQDAGVTTLGDDNWIMAYVHIGHDCRVGSHVVLSSNAQ 157 (283)
T ss_dssp CTTEEEECCCTTTTSEEEECSSCEECTTCEECTTCEECSSCEECTTCE
T ss_pred CcceeEccceecCCCceEECCCcEECceeEEcCCcEECCCcEECCCce
Confidence 99999974 8888888888877774 466666666665553
No 71
>3c8v_A Putative acetyltransferase; YP_390128.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.28A {Desulfovibrio desulfuricans subsp}
Probab=99.47 E-value=2e-13 Score=136.29 Aligned_cols=98 Identities=10% Similarity=0.123 Sum_probs=61.9
Q ss_pred eCCCCeeCCCcEECCCCEECCCCEECCCCEEeceEECCCCEECCCcEEeceEECCCCEECCCcEEeCeEECCCCEECCCc
Q 013012 348 IHPSAELGSKTTVGPHCMLGEGSQMGDKCSVKRSVIGRHCRIGSNVKVVNSVVMNHVTIGDGCSIQGSVICSNAQLQERV 427 (451)
Q Consensus 348 i~~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~~svig~~~~ig~~~~i~~s~i~~~~~Ig~~~~i~~~ii~~~~~i~~~~ 427 (451)
+++++.|++++.+.+++.||++|.|+++|.|.+++||++|.|+++|+|.+|+|++++.||+++.|.+++||++|+||+++
T Consensus 276 I~~~a~I~p~a~i~g~v~IG~~~~I~~~a~I~~v~IG~~~~I~~~~~I~~~vIG~~~~Ig~~a~I~gv~IGd~v~IG~~a 355 (496)
T 3c8v_A 276 SASGASVSGYAVIKGDTVIGENVLVSQRAYLDNAWMGKGSNAQENCYIINSRLERNCVTAHGGKIINAHLGDMIFTGFNS 355 (496)
T ss_dssp CCTTCEECTTSEEESSCEECTTCEECTTCEEEEEEECTTCEECTTCEEEEEEEEESCEECTTCEEESEEEEETCEECTTC
T ss_pred cCCCcEECCCcEEeCCeEECCCCEECCCcEEeceEecCCCEECCCceEeceEeCCCCEECCCcEEcCceECCCcEECCCC
Confidence 44455555555555556666666666666666666666666666666666666666666666666666666666666666
Q ss_pred EEc-c----eEECCCCEECCCCc
Q 013012 428 ALK-D----CQVLSLSTSVFLSL 445 (451)
Q Consensus 428 ~i~-~----~~ig~~~~i~~~~~ 445 (451)
.|. + ++||++++|++++.
T Consensus 356 ~I~~~~~~~v~IG~~a~IGagsv 378 (496)
T 3c8v_A 356 FLQGSESSPLKIGDGCVVMPHTI 378 (496)
T ss_dssp EEECCSSSCEEECTTCEECTTCE
T ss_pred EEeCCCCcceEECCCCEECCCCE
Confidence 665 3 36666666666653
No 72
>3fs8_A QDTC; acetyltransferase, natural product, deoxysugar; HET: ACO; 1.70A {Thermoanaerobacteriumthermosaccharolyticum} PDB: 3fsb_A* 3fsc_A*
Probab=99.47 E-value=7.8e-13 Score=123.84 Aligned_cols=104 Identities=12% Similarity=0.187 Sum_probs=64.9
Q ss_pred ccccCCCceeCCCCeeCCCcEECCCCEECCCCEECCCCEEec---------------eEECCCCEECCCcEEe-ceEECC
Q 013012 339 YNFSAQNNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVKR---------------SVIGRHCRIGSNVKVV-NSVVMN 402 (451)
Q Consensus 339 ~~~~~~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~~---------------svig~~~~ig~~~~i~-~s~i~~ 402 (451)
...+.+++.|++++.|++++.|++++.||++|.|+++|.|.+ ++||++|.|++++.|. +++|++
T Consensus 14 ~a~I~~~~~Ig~~~~Ig~~~~I~~~v~Ig~~~~I~~~~~I~~~~~~~~~~~~~~~~~~~Ig~~~~I~~~~~i~~~~~Ig~ 93 (273)
T 3fs8_A 14 GVIIGENVTIEDNVYIDYGCIIRDNVHIKKGSFIGARSILGEYLVDFYNDRINKKHPLIIGENALIRTENVIYGDTIIGD 93 (273)
T ss_dssp TCEECSSEEECTTCEECTTCEECSSEEECTTCEECTTCEEEECCTTHHHHTCCCCCCEEECTTCEECTTCEEESSCEECT
T ss_pred CcEECCCCEECCCcEECCCCEECCCCEECCCcEECCCcEeCCccccccccccccccceEECCCCEECCCCEEeCCCEECC
Confidence 334445556666666666666666666666777777766653 6777777777777774 677777
Q ss_pred CCEECCCcEEe-CeEECCCCEECCCcEEc-ceEECCCCEECC
Q 013012 403 HVTIGDGCSIQ-GSVICSNAQLQERVALK-DCQVLSLSTSVF 442 (451)
Q Consensus 403 ~~~Ig~~~~i~-~~ii~~~~~i~~~~~i~-~~~ig~~~~i~~ 442 (451)
++.||.++.|. ++.||+++.|+.++.+. +++||+++.|++
T Consensus 94 ~~~Ig~~~~I~~~~~Ig~~~~Ig~~~~i~~~~~IG~~~~I~~ 135 (273)
T 3fs8_A 94 NFQTGHKVTIRENTKIGNNVKIGTLSDIQHHVYIGNYVNIHS 135 (273)
T ss_dssp TCEECSSCEECSSCEECSSCEECTTCEECSSCEECSSCEECT
T ss_pred CCEECCceEECCCCEECCCCEECccceeCCceEECCceEECC
Confidence 77777777663 66666666666555544 244444444433
No 73
>1v3w_A Ferripyochelin binding protein; beta-helix, carbonic anhydrase, structural genomics, riken S genomics/proteomics initiative, RSGI, lyase; 1.50A {Pyrococcus horikoshii} SCOP: b.81.1.5 PDB: 1v67_A 2fko_A
Probab=99.46 E-value=2.4e-13 Score=118.24 Aligned_cols=101 Identities=19% Similarity=0.217 Sum_probs=85.6
Q ss_pred CCceeCCCCeeCCCcEECCC---CEECCCCEECCCCEEe-----ceEECCCCEECCCcEEeceEECCCCEECCCcEEe-C
Q 013012 344 QNNIIHPSAELGSKTTVGPH---CMLGEGSQMGDKCSVK-----RSVIGRHCRIGSNVKVVNSVVMNHVTIGDGCSIQ-G 414 (451)
Q Consensus 344 ~~~~i~~~~~i~~~~~i~~~---~~i~~~~~i~~~~~i~-----~svig~~~~ig~~~~i~~s~i~~~~~Ig~~~~i~-~ 414 (451)
++..+++++.|++++.|.++ +.||++|.|+++|.|. +++||++|.|++++.|.+++|++++.||.++.|. +
T Consensus 27 g~v~IG~~~~I~~~~~i~~~~~~~~IG~~~~I~~~~~I~~~~~~~~~Ig~~~~I~~~~~i~~~~Ig~~~~Ig~~~~i~~~ 106 (173)
T 1v3w_A 27 GDVVLEEKTSVWPSAVLRGDIEQIYVGKYSNVQDNVSIHTSHGYPTEIGEYVTIGHNAMVHGAKVGNYVIIGISSVILDG 106 (173)
T ss_dssp EEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECBTTBCEEECSSCEECTTCEEESCEECSSEEECTTCEECTT
T ss_pred CCEEECCCCEECCCeEEecCCceEEECCCCEECCCcEEEecCCCCeEECCCCEECCCCEECCCEECCCCEECCCCEEeCC
Confidence 34556666666666666543 7888999999999997 5899999999999999999999999999999985 7
Q ss_pred eEECCCCEECCCcEEc-ceEECCCCEE-CCCC
Q 013012 415 SVICSNAQLQERVALK-DCQVLSLSTS-VFLS 444 (451)
Q Consensus 415 ~ii~~~~~i~~~~~i~-~~~ig~~~~i-~~~~ 444 (451)
+.||++++|+++++|. ++.|++++++ +..+
T Consensus 107 ~~Ig~~~~Ig~~s~V~~~~~i~~~~~v~G~pa 138 (173)
T 1v3w_A 107 AKIGDHVIIGAGAVVPPNKEIPDYSLVLGVPG 138 (173)
T ss_dssp CEECSSEEECTTCEECTTCEECTTEEEEETTE
T ss_pred CEECCCCEECCCCEECCCcEeCCCcEEECcCC
Confidence 9999999999999998 4899999998 4444
No 74
>4e6u_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; lipopolysaccaride synthesis; 1.41A {Acinetobacter baumannii} PDB: 4e6t_A*
Probab=99.46 E-value=9.1e-13 Score=122.74 Aligned_cols=111 Identities=18% Similarity=0.165 Sum_probs=60.2
Q ss_pred ccCCccccCCCceeCCCCeeCCCcEECCCCEECCCCEECCCCEE-------------eceEECCCCEECCCcEEe-----
Q 013012 335 HLSGYNFSAQNNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSV-------------KRSVIGRHCRIGSNVKVV----- 396 (451)
Q Consensus 335 ~~~~~~~~~~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~~~~~i-------------~~svig~~~~ig~~~~i~----- 396 (451)
.+..+..+.+++.|++++.|+++++|++++.||++|.|++++.| .+++||++|.|+++++|.
T Consensus 27 ~Ig~~~~I~~~v~IG~~~~I~~~~~I~~~~~IG~~~~I~~~a~Ig~~~~~~~~~g~~~~~~IG~~~~Ig~~~~I~~g~~~ 106 (265)
T 4e6u_A 27 QIGPYCIIGPQVTIGAGTKLHSHVVVGGFTRIGQNNEIFQFASVGEVCQDLKYKGEETWLEIGNNNLIREHCSLHRGTVQ 106 (265)
T ss_dssp EECTTCEECTTEEECTTCEECSSCEECSSEEECSSCEECTTCEEEECCCCTTCCSCCCEEEECSSCEECTTCEEECCCTT
T ss_pred EECCCeEECCCCEECCCCEEcCCcEEeCCcEECCCCEEcCCcEECCccccccccCCCCeEEECCCeEECCceEECccccc
Confidence 33334444445555555555555555556666666666666666 346667777777776665
Q ss_pred ---ceEECCCCEECCCcEE-eC------------------eEECCCCEECCCcEEc-ceEECCCCEECCCCc
Q 013012 397 ---NSVVMNHVTIGDGCSI-QG------------------SVICSNAQLQERVALK-DCQVLSLSTSVFLSL 445 (451)
Q Consensus 397 ---~s~i~~~~~Ig~~~~i-~~------------------~ii~~~~~i~~~~~i~-~~~ig~~~~i~~~~~ 445 (451)
+++|++++.|+.++.| .+ +.||++++|+.++.|. ++.||++++|++++.
T Consensus 107 ~~~~~~IG~~~~I~~~~~I~~~~~Ig~~~~i~~~~~i~~~v~Igd~~~Ig~~a~V~~~v~Ig~~~~i~~~sv 178 (265)
T 4e6u_A 107 DNALTKIGSHNLLMVNTHIAHDCIVGDHNIFANNVGVAGHVHIGDHVIVGGNSGIHQFCKIDSYSMIGGASL 178 (265)
T ss_dssp TTSEEEECSSCEECTTCEECTTCEECSSCEECTTCEECTTCEECSSCEECTTCEECTTCEECTTCEECTTCE
T ss_pred CCCceEEccCcEEeeeeEEcccEEECCCcEEcCCcEECCCcEECCCeEEcCCCEECCCcEECCCCEEcCCCE
Confidence 2455554444444444 22 4444455555555544 355555555555553
No 75
>4e6u_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; lipopolysaccaride synthesis; 1.41A {Acinetobacter baumannii} PDB: 4e6t_A*
Probab=99.46 E-value=8.1e-13 Score=123.08 Aligned_cols=104 Identities=20% Similarity=0.268 Sum_probs=74.2
Q ss_pred ccCCCceeCCCCeeCCCcEECCCCEECCCCEECCCCEEe-ceEECCCCEECCCcEE-------------eceEECCCCEE
Q 013012 341 FSAQNNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVK-RSVIGRHCRIGSNVKV-------------VNSVVMNHVTI 406 (451)
Q Consensus 341 ~~~~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~-~svig~~~~ig~~~~i-------------~~s~i~~~~~I 406 (451)
.+.+++.+++++.|++.++|++++.||++|.|++++.|. ++.||++|.|++++.| .+++|++++.|
T Consensus 15 ~i~~~a~Ig~~v~Ig~~~~I~~~v~IG~~~~I~~~~~I~~~~~IG~~~~I~~~a~Ig~~~~~~~~~g~~~~~~IG~~~~I 94 (265)
T 4e6u_A 15 IIDPSAVIASDVQIGPYCIIGPQVTIGAGTKLHSHVVVGGFTRIGQNNEIFQFASVGEVCQDLKYKGEETWLEIGNNNLI 94 (265)
T ss_dssp EECTTCEECTTCEECTTCEECTTEEECTTCEECSSCEECSSEEECSSCEECTTCEEEECCCCTTCCSCCCEEEECSSCEE
T ss_pred EECCCCEECCCCEECCCeEECCCCEECCCCEEcCCcEEeCCcEECCCCEEcCCcEECCccccccccCCCCeEEECCCeEE
Confidence 344555666666666666666677777777777777776 4888888888888888 46888999999
Q ss_pred CCCcEEe--------CeEECCCCEECCCcEEc-ceEECCCCEECCCC
Q 013012 407 GDGCSIQ--------GSVICSNAQLQERVALK-DCQVLSLSTSVFLS 444 (451)
Q Consensus 407 g~~~~i~--------~~ii~~~~~i~~~~~i~-~~~ig~~~~i~~~~ 444 (451)
++++.|. .++||+++.|++++.|. +|+||+++.++.++
T Consensus 95 g~~~~I~~g~~~~~~~~~IG~~~~I~~~~~I~~~~~Ig~~~~i~~~~ 141 (265)
T 4e6u_A 95 REHCSLHRGTVQDNALTKIGSHNLLMVNTHIAHDCIVGDHNIFANNV 141 (265)
T ss_dssp CTTCEEECCCTTTTSEEEECSSCEECTTCEECTTCEECSSCEECTTC
T ss_pred CCceEECcccccCCCceEEccCcEEeeeeEEcccEEECCCcEEcCCc
Confidence 9888886 37777777777777664 45555555555544
No 76
>2pig_A Putative transferase; SCR6, NESG, YDCK, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.38A {Salmonella paratyphi} PDB: 2f9c_A
Probab=99.46 E-value=4.1e-13 Score=127.90 Aligned_cols=108 Identities=20% Similarity=0.293 Sum_probs=77.7
Q ss_pred CccccCC-CceeCCCCeeCCCcEECCCCEECCCCEECCCCEEeceEECCCCEECCCcEEeceEECCCCE-----------
Q 013012 338 GYNFSAQ-NNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVKRSVIGRHCRIGSNVKVVNSVVMNHVT----------- 405 (451)
Q Consensus 338 ~~~~~~~-~~~i~~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~~svig~~~~ig~~~~i~~s~i~~~~~----------- 405 (451)
+..++.+ ++.+++++.|++++.|++++.|+++|+|+++|.|++|+|+++|.|+++++|.+++|++++.
T Consensus 57 ~~~~I~~~~a~I~~~a~I~~~~~I~g~~~Ig~~~~Ig~~~~I~~~~Ig~~~~I~~~s~I~~s~I~~~~~I~~~~~i~~~s 136 (334)
T 2pig_A 57 GDCWIYDENAMAFAGTEITGNARITQPCTLYNNVRIGDNVWIDRADISDGARISDNVTIQSSSVREECAIYGDARVLNQS 136 (334)
T ss_dssp SSCEECCTTCEEETTCEECTTCEEESSCEEESSCEECTTCEEESCEEESSCEECTTCEEESCEEESSEEECTTCEEESSC
T ss_pred CceEEcCCCeEEcCCcEECCCcEEeeeeeECCCcEECCCCEEEeEEEcCCCEEeCCcEEeccEEcCCeEEecCCEEeCCE
Confidence 3445556 6777778888888888888888888888888888888888888888888887666555544
Q ss_pred -----------------ECCCcEEeCeEECCCCEECCCcEEcceEECCCCEECCCCc
Q 013012 406 -----------------IGDGCSIQGSVICSNAQLQERVALKDCQVLSLSTSVFLSL 445 (451)
Q Consensus 406 -----------------Ig~~~~i~~~ii~~~~~i~~~~~i~~~~ig~~~~i~~~~~ 445 (451)
|++++.|.+++|+++|.|++++.|.+++|++++.|+.++.
T Consensus 137 ~I~~~~~~~~~~~~g~~I~~~a~I~~s~I~~g~~I~~~a~I~~svI~~~a~I~~~a~ 193 (334)
T 2pig_A 137 EILAIQGLTHEHAQILQIYDRATVNHSRIVHQVQLYGNATITHAFIEHRAEVFDFAL 193 (334)
T ss_dssp EEEC--------CCCEEECTTCEEESCEEETTCEECTTCEEESEEECTTCEECTTCE
T ss_pred EEeecceeecccCCCeEECCCCEEeccEEcCCCEEcCCeEEeCcEEcCCCEECCCcE
Confidence 4444445556666777777777776666666666666554
No 77
>3r3r_A Ferripyochelin binding protein; structural genomics, csgid, center for structural genomics O infectious diseases, all beta protein; 1.20A {Salmonella enterica subsp} SCOP: b.81.1.0 PDB: 3tio_A 3tis_A
Probab=99.46 E-value=2.9e-13 Score=119.35 Aligned_cols=99 Identities=13% Similarity=0.216 Sum_probs=83.9
Q ss_pred CCCceeCCCCeeCCCcEECCCC---EECCCCEECCCCEE------------eceEECCCCEECCCcEEeceEECCCCEEC
Q 013012 343 AQNNIIHPSAELGSKTTVGPHC---MLGEGSQMGDKCSV------------KRSVIGRHCRIGSNVKVVNSVVMNHVTIG 407 (451)
Q Consensus 343 ~~~~~i~~~~~i~~~~~i~~~~---~i~~~~~i~~~~~i------------~~svig~~~~ig~~~~i~~s~i~~~~~Ig 407 (451)
.++..|++++.|++++.|.+++ .||++|.|+++|.| .+++||++|.|++++.|.+++|++++.||
T Consensus 31 ~~~v~IG~~~~I~~~~~i~~~~~~i~IG~~~~I~~~~~I~~~~~~~~~~~~~~~~Ig~~~~Ig~~~~i~~~~Ig~~~~Ig 110 (187)
T 3r3r_A 31 IGDVRLADDVGIWPLVVIRGDVNYVAIGARTNIQDGSVLHVTHKSSSNPHGNPLIIGEDVTVGHKVMLHGCTIGNRVLVG 110 (187)
T ss_dssp EEEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECBCCBTTBC-CBCEEECSSCEECTTCEEESCEECSSEEEC
T ss_pred ECceEECCCCEECCCcEEEcCCccEEECCCCEECCCCEEecCCccccCCCCCCeEECCCCEECCCCEEeCcEECCCCEEC
Confidence 3455666666666666665543 88999999999999 57999999999999999999999999999
Q ss_pred CCcEE-eCeEECCCCEECCCcEEcc-eEECCCCEEC
Q 013012 408 DGCSI-QGSVICSNAQLQERVALKD-CQVLSLSTSV 441 (451)
Q Consensus 408 ~~~~i-~~~ii~~~~~i~~~~~i~~-~~ig~~~~i~ 441 (451)
.++.| .++.||++++|+++++|.. ..|++++++.
T Consensus 111 ~~~~I~~~~~Ig~~~~Ig~~s~V~~~~~i~~~~vv~ 146 (187)
T 3r3r_A 111 MGSIVLDGAIIEDDVMIGAGSLVPQHKRLESGYLYL 146 (187)
T ss_dssp TTCEECTTCEECSSEEECTTCEECTTCEECTTEEEE
T ss_pred CCCEECCCCEECCCCEECCCCEECCCcCcCCCcEEE
Confidence 99999 5799999999999999984 8889988854
No 78
>3bfp_A Acetyltransferase; LEFT-handed beta helix, COA binding protein, N-glycan biosynthesis, bacillosamine, structural genomics, MKBSGI; HET: FLC; 1.75A {Campylobacter jejuni} SCOP: b.81.1.8 PDB: 2vhe_A* 3bsw_A* 3bss_A* 3bsy_A* 2npo_A
Probab=99.46 E-value=1.8e-12 Score=114.73 Aligned_cols=63 Identities=13% Similarity=0.043 Sum_probs=29.1
Q ss_pred EECCCCEECCCcEEe-ceEECCCCEECCCcEEeC-eEECCCCEECCCcEEc-ceEECCCCEECCCC
Q 013012 382 VIGRHCRIGSNVKVV-NSVVMNHVTIGDGCSIQG-SVICSNAQLQERVALK-DCQVLSLSTSVFLS 444 (451)
Q Consensus 382 vig~~~~ig~~~~i~-~s~i~~~~~Ig~~~~i~~-~ii~~~~~i~~~~~i~-~~~ig~~~~i~~~~ 444 (451)
.||++|.|+.++.|. ++.|+++++|+.++.|.+ +.||+++.|+.++.|. +++||++++|++++
T Consensus 109 ~IG~~~~I~~~~~i~~~~~Ig~~~~I~~~~~i~~~~~Ig~~~~Ig~~~~i~~~~~Ig~~~~Igags 174 (194)
T 3bfp_A 109 KIEKGVILNTSSVIEHECVIGEFSHVSVGAKCAGNVKIGKNCFLGINSCVLPNLSLADDSILGGGA 174 (194)
T ss_dssp EECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTC
T ss_pred EECCCCEECCCCEEcCCCEECCCCEECCCCEECCCcEECCCCEEcCCCEECCCCEECCCCEECCCC
Confidence 344444444444443 344555555555454432 4455555555444443 24444444444444
No 79
>3hsq_A Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; L.interrogans LPXA, LPXA, LPXA acyltransferase; 2.10A {Leptospira interrogans} SCOP: b.81.1.0 PDB: 3i3a_A* 3i3x_A*
Probab=99.46 E-value=1e-12 Score=121.95 Aligned_cols=110 Identities=16% Similarity=0.178 Sum_probs=61.0
Q ss_pred CCccccCCCceeCCCCeeCCCcEECCCCEECCCCEECCCCEE-------------e-ceEECCCCEECCCcEEe------
Q 013012 337 SGYNFSAQNNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSV-------------K-RSVIGRHCRIGSNVKVV------ 396 (451)
Q Consensus 337 ~~~~~~~~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~~~~~i-------------~-~svig~~~~ig~~~~i~------ 396 (451)
..+..+.+++.|++++.|++++.|.+++.||++|.|+++|.| . +++||++|.|+++++|.
T Consensus 22 ~~~~~I~~~v~IG~~~~I~~~~~I~~~~~IG~~~~I~~~a~Ig~~~~~~~~~g~~~~~v~IG~~~~Ig~~~~I~~~~~~~ 101 (259)
T 3hsq_A 22 GPYSIIEGNVSIQEGTIIEGHVKICAGSEIGKFNRFHQGAVIGVMPQDLGFNQQLLTKTVIGDHNIFREYSNIHKGTKED 101 (259)
T ss_dssp CTTCEECSSCEECTTCEECTTCEECTTEEECSSCEECTTCEEEECCSCTTCCTTSCCCEEECSSCEECTTCEEECCSBTT
T ss_pred CCCCEECCCCEECCCCEEcCCcEEcCCcEECCCcEECCCCEECCCcccccccCccCCcEEECCCcEECCCCEECCCccCC
Confidence 333344445555555555555555555555566666666555 2 35566666666666654
Q ss_pred -ceEECCC------------------CEECCCcEE-eCeEECCCCEECCCcEEc-ceEECCCCEECCCCcc
Q 013012 397 -NSVVMNH------------------VTIGDGCSI-QGSVICSNAQLQERVALK-DCQVLSLSTSVFLSLS 446 (451)
Q Consensus 397 -~s~i~~~------------------~~Ig~~~~i-~~~ii~~~~~i~~~~~i~-~~~ig~~~~i~~~~~~ 446 (451)
.++|+++ +.|+.++.+ +++.||++++|+.++.|. ++.||++++|++++..
T Consensus 102 ~~~~IG~~~~I~~~~~I~~~~~IG~~~~i~~~~~i~~~v~Igd~~~Ig~~a~V~~~v~Ig~~~~Vg~~s~V 172 (259)
T 3hsq_A 102 SPTVIGNKNYFMGNSHVGHDCILGNNNILTHGAVLAGHVTLGNFAFISGLVAVHQFCFVGDYSMVAGLAKV 172 (259)
T ss_dssp BCEEECSSCEECTTCEECTTCEECSSCEECTTCEECTTCEECSSCEECSSEEECTTCEECTTCEECSSEEE
T ss_pred CcEEECCCcEEcCCcEECCCcEECCccEEcCCceECCccEECCCcEEeCCCEECCCCEECCCCEECCCCEE
Confidence 3334443 333333333 245666666666666666 4677777777766643
No 80
>3pmo_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltr; lipid A biosynthesis pathway, transferase; 1.30A {Pseudomonas aeruginosa}
Probab=99.46 E-value=1.2e-12 Score=127.32 Aligned_cols=33 Identities=18% Similarity=0.421 Sum_probs=16.7
Q ss_pred ceEECCCCEECCCcEE-----eCeEECCCCEECCCcEE
Q 013012 397 NSVVMNHVTIGDGCSI-----QGSVICSNAQLQERVAL 429 (451)
Q Consensus 397 ~s~i~~~~~Ig~~~~i-----~~~ii~~~~~i~~~~~i 429 (451)
+++|+++|.||+++.| .+++||+++.|+.++.|
T Consensus 222 ~v~IGd~v~IGa~~~I~~g~~~~t~IG~~~~I~~~v~I 259 (372)
T 3pmo_A 222 GVTIGDDVEIGANTTIDRGALSDTLIGNGVKLDNQIMI 259 (372)
T ss_dssp CEEECSSCEECTTCEEECCSSSCEEECTTCEECTTCEE
T ss_pred CeEECCCCEECCCcEEccCcccceEECCCCEECCCCEE
Confidence 4555666666666655 23444444444444444
No 81
>2px7_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; TTHA0171, ISPD_THET8, ISPD, structural genomics PSI; 2.20A {Thermus thermophilus HB8}
Probab=99.46 E-value=1.6e-13 Score=125.59 Aligned_cols=112 Identities=21% Similarity=0.272 Sum_probs=79.8
Q ss_pred CCceEEEEecCCCCCCCCCCCCCCcccccccCCcchHHHHHHHHHHCCCcEEEEEecCchhhHHHHHhhhhhccCceeeE
Q 013012 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVE 80 (451)
Q Consensus 1 m~~~avIlAgG~g~Rl~pl~~~~~pK~llpv~gkpli~~~l~~l~~~gi~~iivv~~~~~~~~~i~~~~~~~~~~~~~~~ 80 (451)
|++.|||||||.|+||. .. ||+|+|++|+|||+|+++. ..++++++|++++ . +.+ +.. ..+.
T Consensus 24 M~~~aiILAgG~s~Rm~----~~-~K~l~~i~gkpli~~~l~~--~~~~~~ivvv~~~-~----~~~-~~~-----~~v~ 85 (236)
T 2px7_A 24 MEVSVLIPAAGNGLRLG----RG-PKAFLQVGGRTLLEWTLAA--FRDAAEVLVALPP-G----AEP-PKG-----LGAV 85 (236)
T ss_dssp CCCEEEEECCC-----------C-CGGGCBCSSSBHHHHHHHH--TTTCSEEEEEECT-T----CCC-CTT-----CSCE
T ss_pred CceEEEEEcCCCCccCC----CC-CCeEEEECCEEHHHHHHHh--cCCCCeEEEEeCH-H----HHH-hhc-----CCcE
Confidence 66779999999999993 34 9999999999999999999 6789999999974 1 111 211 1244
Q ss_pred EEEcCCCCChHHHHHHHHhcCCCCcEEEEcCC--ccCCCCchHHHHHHHhcCce
Q 013012 81 VATVPEDVGTAGALRAIAHHLTAKDVLVVSGD--LVSDVPPGAVTAAHRRHDAV 132 (451)
Q Consensus 81 i~~~~~~~gt~~~l~~~~~~l~~~~~lvl~~D--~i~~~~~~~~l~~~~~~~~~ 132 (451)
++ ++..|+..+++.+++.+..+.+++++|| ++....+..+++.+.+.++.
T Consensus 86 ~~--~~~~~~~~~i~~al~~~~~~~vlv~~~D~P~~~~~~i~~l~~~~~~~~~~ 137 (236)
T 2px7_A 86 FL--EGGATRQASVARLLEAASLPLVLVHDVARPFVSRGLVARVLEAAQRSGAA 137 (236)
T ss_dssp EE--ECCSSHHHHHHHHHHHCCSSEEEECCTTCCCCCHHHHHHHHHHHHHHSEE
T ss_pred EE--eCCCchHHHHHHHHHHcCCCeEEEecCccccCCHHHHHHHHHHHHhcCCe
Confidence 44 3345788999999888765669999999 45566788999888765543
No 82
>3ixc_A Hexapeptide transferase family protein; niaid, ssgcid, seattle structural genomics center for infect disease, GRAM-negative bacteria; 1.61A {Anaplasma phagocytophilum}
Probab=99.46 E-value=6.8e-13 Score=117.26 Aligned_cols=97 Identities=22% Similarity=0.240 Sum_probs=77.0
Q ss_pred CceeCCCCeeCCCcEECC---CCEECCCCEECCCCEEe------ceEECCCCEECCCcEEeceEECCCCEECCCcEEe-C
Q 013012 345 NNIIHPSAELGSKTTVGP---HCMLGEGSQMGDKCSVK------RSVIGRHCRIGSNVKVVNSVVMNHVTIGDGCSIQ-G 414 (451)
Q Consensus 345 ~~~i~~~~~i~~~~~i~~---~~~i~~~~~i~~~~~i~------~svig~~~~ig~~~~i~~s~i~~~~~Ig~~~~i~-~ 414 (451)
++.|++++.|++++.|.. ++.||++|.|+++|.|. +++||++|.||+++.|.+++|+++|.||.++.|. +
T Consensus 51 ~v~IG~~~~I~~~~~I~~~~~~i~IG~~~~I~~~~~I~~~~~~g~~~Ig~~~~Ig~~~~i~~~~Ig~~~~Ig~~~~I~~~ 130 (191)
T 3ixc_A 51 DVCIGKNASIWYGTVLRGDVDKIEVGEGTNIQDNTVVHTDSMHGDTVIGKFVTIGHSCILHACTLGNNAFVGMGSIVMDR 130 (191)
T ss_dssp EEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEECC----CCEEECTTCEECTTCEECSCEECTTCEECTTCEECTT
T ss_pred CcEECCCCEECCCCEEecCCCCeEECCCCEECCCCEEeecCCcCCeEECCCCEECCCCEEECCEECCCCEECCCCEEeCC
Confidence 334444444444444432 22568888999999887 8999999999999999999999999999999996 6
Q ss_pred eEECCCCEECCCcEEcc-eEECCCCEEC
Q 013012 415 SVICSNAQLQERVALKD-CQVLSLSTSV 441 (451)
Q Consensus 415 ~ii~~~~~i~~~~~i~~-~~ig~~~~i~ 441 (451)
+.||++++|+++++|.. ..|++++++.
T Consensus 131 ~~Ig~~~~Ig~gsvV~~~~~i~~~~~v~ 158 (191)
T 3ixc_A 131 AVMEEGSMLAAGSLLTRGKIVKSGELWA 158 (191)
T ss_dssp CEECTTCEECTTCEECTTCEECTTEEEE
T ss_pred eEECCCCEECCCCEECCCcCcCCCeEEE
Confidence 89999999999998884 7888888754
No 83
>4e79_A UDP-3-O-acylglucosamine N-acyltransferase; lipopolysaccaride synthesis; 2.66A {Acinetobacter baumannii} PDB: 4e75_A
Probab=99.46 E-value=1.2e-12 Score=126.84 Aligned_cols=61 Identities=23% Similarity=0.492 Sum_probs=24.4
Q ss_pred CeeCCCcEECCCCEECCCCEECCCCEEe-ceEECCCCEECCCcEEe-ceEECCCCEECCCcEE
Q 013012 352 AELGSKTTVGPHCMLGEGSQMGDKCSVK-RSVIGRHCRIGSNVKVV-NSVVMNHVTIGDGCSI 412 (451)
Q Consensus 352 ~~i~~~~~i~~~~~i~~~~~i~~~~~i~-~svig~~~~ig~~~~i~-~s~i~~~~~Ig~~~~i 412 (451)
+.|+++++|++++.||++|.|+++|.|. +++||++|.|+++++|. +++|+++|.|++++.|
T Consensus 121 ~~I~~~~~I~~~~~IG~~~~I~~~~~I~~~~~IG~~~~I~~~~~I~~~~~IG~~~~I~~g~~I 183 (357)
T 4e79_A 121 AYIGHYVVIGENCVVGDNTVIQSHTKLDDNVEVGKDCFIDSYVTITGSSKLRDRVRIHSSTVI 183 (357)
T ss_dssp CEECTTCEECTTCEECTTCEECTTCEECTTCEECSSCEECTTCEECTTCEECSSCEECTTCEE
T ss_pred CEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCcEEecccEEEeEeeccCCeEE
Confidence 3333333333333333333333333333 24444444444444442 3444444444444444
No 84
>3eh0_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase; LPXD, LEFT-handed parallel beta helix, acyl carrier protein, antibiotic resistance; 2.60A {Escherichia coli}
Probab=99.46 E-value=1.6e-12 Score=125.43 Aligned_cols=67 Identities=21% Similarity=0.360 Sum_probs=26.5
Q ss_pred ceeCCCCeeCCCcEECCCCEECCCCEECCCCEEe-ceEECCCCEECCCcEE-eceEECCCCEECCCcEE
Q 013012 346 NIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVK-RSVIGRHCRIGSNVKV-VNSVVMNHVTIGDGCSI 412 (451)
Q Consensus 346 ~~i~~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~-~svig~~~~ig~~~~i-~~s~i~~~~~Ig~~~~i 412 (451)
+.+++++.|+++++|++++.||++|.|+++|.|. ++.||++|.|+++++| .++.|+++|.|+.++.|
T Consensus 110 a~ig~~~~I~~~~~I~~~v~IG~~~~I~~~~~Ig~~~~IG~~~~I~~~~~I~~~~~IG~~~~I~~g~~I 178 (341)
T 3eh0_A 110 AKLGNNVSIGANAVIESGVELGDNVIIGAGCFVGKNSKIGAGSRLWANVTIYHEIQIGQNCLIQSGTVV 178 (341)
T ss_dssp CEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSSCEECTTCEECSSCEECTTCEE
T ss_pred cEECCCCEECCCcEECCCcEECCCcEECCCcEECCCCEECCCcEECCCcEECCCCEECCccEEcCCcEE
Confidence 3333333333333333333333334333333332 2344444444444444 23444444444444443
No 85
>2ggo_A 401AA long hypothetical glucose-1-phosphate thymidylyltransferase; beta barrel; 1.80A {Sulfolobus tokodaii} PDB: 2ggq_A*
Probab=99.45 E-value=3.5e-13 Score=133.44 Aligned_cols=86 Identities=24% Similarity=0.380 Sum_probs=73.4
Q ss_pred CceeCCCCeeCCCcEECCCCEECCCCEECCCCEEe-ceEECCCCEECCCcEEeceEECCCCEECCCcEEeCeEECCCCEE
Q 013012 345 NNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVK-RSVIGRHCRIGSNVKVVNSVVMNHVTIGDGCSIQGSVICSNAQL 423 (451)
Q Consensus 345 ~~~i~~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~-~svig~~~~ig~~~~i~~s~i~~~~~Ig~~~~i~~~ii~~~~~i 423 (451)
++.+++++.|++++.|++++.||++|.|+++|.|. +++||++|.||++|.|.+|+|++++.|++++.|++++||+++.|
T Consensus 244 ~~~ig~~~~I~~~~~i~~~~~Ig~~~~I~~~~~i~~~~~Ig~~~~ig~~~~i~~~~i~~~~~i~~~~~i~~~~Ig~~~~I 323 (401)
T 2ggo_A 244 KVIIEEDAEIKSGTYIEGPVYIGKGSEIGPNSYLRPYTILVEKNKIGASVEVKESVIMEGSKIPHLSYVGDSVIAEDVNF 323 (401)
T ss_dssp CEEECTTCEECTTCEEESSEEECTTCEECSSCEECTTEEECSSCEEEETCEEESEEECTTCEEEESCEEESCEECTTCEE
T ss_pred CeEEcCCCEECCCCEEeCCeEECCCCEECCCCEEcCCcEECCCCEECCCCEEecCEEcCCcEECCCceEcceEECCCcEE
Confidence 34455555566666666677788888888888887 69999999999999999999999999999999999999999999
Q ss_pred CCCcEEc
Q 013012 424 QERVALK 430 (451)
Q Consensus 424 ~~~~~i~ 430 (451)
++++.|.
T Consensus 324 g~~~~i~ 330 (401)
T 2ggo_A 324 GAGTLIA 330 (401)
T ss_dssp CTTCEEC
T ss_pred CCCcEEc
Confidence 9988886
No 86
>3hsq_A Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; L.interrogans LPXA, LPXA, LPXA acyltransferase; 2.10A {Leptospira interrogans} SCOP: b.81.1.0 PDB: 3i3a_A* 3i3x_A*
Probab=99.45 E-value=1.4e-12 Score=120.99 Aligned_cols=104 Identities=16% Similarity=0.238 Sum_probs=77.5
Q ss_pred cccCCCceeCCCCeeCCCcEECCCCEECCCCEECCCCEEec-eEECCCCEECCCcEE--------------eceEECCCC
Q 013012 340 NFSAQNNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVKR-SVIGRHCRIGSNVKV--------------VNSVVMNHV 404 (451)
Q Consensus 340 ~~~~~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~~-svig~~~~ig~~~~i--------------~~s~i~~~~ 404 (451)
.++++.+.+++++.|++.++|++++.||++|.|+++|.|.. +.||++|.|++++.| .+++|++++
T Consensus 7 a~I~~~a~ig~~v~I~~~~~I~~~v~IG~~~~I~~~~~I~~~~~IG~~~~I~~~a~Ig~~~~~~~~~g~~~~~v~IG~~~ 86 (259)
T 3hsq_A 7 AIIDPKAELHESVEVGPYSIIEGNVSIQEGTIIEGHVKICAGSEIGKFNRFHQGAVIGVMPQDLGFNQQLLTKTVIGDHN 86 (259)
T ss_dssp CEECTTCEECTTCEECTTCEECSSCEECTTCEECTTCEECTTEEECSSCEECTTCEEEECCSCTTCCTTSCCCEEECSSC
T ss_pred cEECCCCEECCCCEECCCCEECCCCEECCCCEEcCCcEEcCCcEECCCcEECCCCEECCCcccccccCccCCcEEECCCc
Confidence 34456667777777777788888888888888888888885 999999999999999 378999999
Q ss_pred EECCCcEEe-------CeEECCCCEECCCcEEc-ceEECCCCEECCC
Q 013012 405 TIGDGCSIQ-------GSVICSNAQLQERVALK-DCQVLSLSTSVFL 443 (451)
Q Consensus 405 ~Ig~~~~i~-------~~ii~~~~~i~~~~~i~-~~~ig~~~~i~~~ 443 (451)
.|++++.|. .++||+++.|++++.|. +|.||+++.++++
T Consensus 87 ~Ig~~~~I~~~~~~~~~~~IG~~~~I~~~~~I~~~~~IG~~~~i~~~ 133 (259)
T 3hsq_A 87 IFREYSNIHKGTKEDSPTVIGNKNYFMGNSHVGHDCILGNNNILTHG 133 (259)
T ss_dssp EECTTCEEECCSBTTBCEEECSSCEECTTCEECTTCEECSSCEECTT
T ss_pred EECCCCEECCCccCCCcEEECCCcEEcCCcEECCCcEECCccEEcCC
Confidence 999999987 56666666655555554 2444444444433
No 87
>3r8y_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- acetyltransferase; structural genomics, csgid; 1.70A {Bacillus anthracis} PDB: 3cj8_A*
Probab=99.45 E-value=8.5e-13 Score=121.09 Aligned_cols=100 Identities=18% Similarity=0.347 Sum_probs=81.1
Q ss_pred ccCCCceeCCCCeeCCCcEECCCCEECCCCEECCCCEEe-ceEECCCCEECCCcEEec---------eEECCCCEECCCc
Q 013012 341 FSAQNNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVK-RSVIGRHCRIGSNVKVVN---------SVVMNHVTIGDGC 410 (451)
Q Consensus 341 ~~~~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~-~svig~~~~ig~~~~i~~---------s~i~~~~~Ig~~~ 410 (451)
.+.+++.|++++.|+.++.|++++.||++|.|+.+|.|. +++||++|.|++++.+.+ ++|+++|.||.+|
T Consensus 99 ~I~~~v~Ig~~~~I~~~s~I~~~~~IG~~~~I~~~~~I~~~~~IG~~~~I~~~~~i~~~~~~~~~~~~~Ig~~~~IG~~~ 178 (240)
T 3r8y_A 99 IIRDHVEIGDNAVIMMNATINIGAVIGEGSMIDMNAVLGGRATVGKNCHVGAGAVLAGVIEPPSAKPVIVEDDVVIGANV 178 (240)
T ss_dssp EEBSSCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECCCCSCTTSCCCEECTTCEECTTC
T ss_pred EECCCcEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCcEECCCcEECCCccCCCCCCcEECCCCEECCCC
Confidence 344566777777777777777777788888888777776 688999999999999876 8999999999999
Q ss_pred EE-eCeEECCCCEECCCcEEcceEECCCCEEC
Q 013012 411 SI-QGSVICSNAQLQERVALKDCQVLSLSTSV 441 (451)
Q Consensus 411 ~i-~~~ii~~~~~i~~~~~i~~~~ig~~~~i~ 441 (451)
.| .++.||++++|+++++|.+. |.+++++.
T Consensus 179 ~I~~~~~Ig~~~~I~~gsvV~~~-vp~~~v~~ 209 (240)
T 3r8y_A 179 VVLEGVTVGKGAVVAAGAVVTED-VPPYTVVA 209 (240)
T ss_dssp EECTTCEECTTCEECTTCEECSC-BCTTEEEE
T ss_pred EECCCcEECCCCEECCCCEECCC-cCCCcEEE
Confidence 99 79999999999999999854 56666654
No 88
>2e8b_A Probable molybdopterin-guanine dinucleotide biosy protein A; putative protein, molybdenum cofactor, structural G NPPSFA; 1.61A {Aquifex aeolicus}
Probab=99.44 E-value=1.1e-13 Score=123.54 Aligned_cols=103 Identities=23% Similarity=0.272 Sum_probs=80.3
Q ss_pred CceEEEEecCCCCCCCCCCCCCCcccccccCCcchHHHHHHHHHHCCCcEEEEEecCchhhHHHHHhhhhhccCceeeEE
Q 013012 2 DFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVEV 81 (451)
Q Consensus 2 ~~~avIlAgG~g~Rl~pl~~~~~pK~llpv~gkpli~~~l~~l~~~gi~~iivv~~~~~~~~~i~~~~~~~~~~~~~~~i 81 (451)
++.|||||||.|+|| +.||+|+|++|+|||+|+++.+..+ +++++|++++... +++. ++.+
T Consensus 14 ~~~~iILA~G~g~Rm------g~~K~ll~i~g~pll~~~l~~l~~~-~~~i~vv~~~~~~-----~~~~-------~~~~ 74 (201)
T 2e8b_A 14 VNTCYVLAGGKSKRF------GEDKLLYEIKGKKVIERVYETAKSV-FKEVYIVAKDREK-----FSFL-------NAPV 74 (201)
T ss_dssp CCEEEEEEESSCCCC------STTHHHHHHHHHHHHHHHHHHHHTT-CSEEEEEESCSGG-----GGGG-------TCCE
T ss_pred CceEEEECCCCCccC------CCCcccceECceEHHHHHHHHHHHh-CCEEEEEeCcHHH-----hhcC-------CceE
Confidence 468999999999999 3799999999999999999999988 8999999985421 1121 2445
Q ss_pred EEcC-CCCChHHHHHHHHhcCCCCcEEEEcCCc--cCCCCchH-HH
Q 013012 82 ATVP-EDVGTAGALRAIAHHLTAKDVLVVSGDL--VSDVPPGA-VT 123 (451)
Q Consensus 82 ~~~~-~~~gt~~~l~~~~~~l~~~~~lvl~~D~--i~~~~~~~-~l 123 (451)
+..+ ...|++++++.+++.+..+.+++++||. +....+.. ++
T Consensus 75 v~~~~~~~g~~~~i~~al~~~~~~~~lv~~~D~P~i~~~~i~~~l~ 120 (201)
T 2e8b_A 75 VLDEFEESASIIGLYTALKHAKEENVFVLSGDLPLMKKETVLYVLE 120 (201)
T ss_dssp EECCCSSCCHHHHHHHHHHHCSSSEEEEEETTCTTCCHHHHHHHHH
T ss_pred EecCCCCCCcHHHHHHHHHHcCCCCEEEEeCCcCcCCHHHHHHHHh
Confidence 5433 4579999999999888667899999994 34444555 54
No 89
>1w55_A ISPD/ISPF bifunctional enzyme; biosynthetic pathway, isoprenoids, nonmevalonate, transferase; HET: C GPP; 2.3A {Campylobacter jejuni} SCOP: c.68.1.13 d.79.5.1 PDB: 1w57_A*
Probab=99.44 E-value=2.4e-13 Score=131.72 Aligned_cols=114 Identities=19% Similarity=0.266 Sum_probs=90.1
Q ss_pred CCceEEEEecCCCCCCCCCCCCCCcccccccCCcchHHHHHHHHHH-CCCcEEEEEecCchhhHHHHHhhhhhccCceee
Q 013012 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLEL-SNIKDLIVVVEGADAALRVGGWISAAYVDRLHV 79 (451)
Q Consensus 1 m~~~avIlAgG~g~Rl~pl~~~~~pK~llpv~gkpli~~~l~~l~~-~gi~~iivv~~~~~~~~~i~~~~~~~~~~~~~~ 79 (451)
|++.|||||||.|+|| ....||+|+|++|+|||+|+++.+.+ .++++++|+++ . .+.+.+++. . +
T Consensus 2 mki~aIILAaG~ssRm----g~~~pK~ll~l~GkPLi~~~l~~l~~~~~~~~IvVvt~-~--~~~i~~~~~-----~--v 67 (371)
T 1w55_A 2 SEMSLIMLAAGNSTRF----NTKVKKQFLRLGNDPLWLYATKNLSSFYPFKKIVVTSS-N--ITYMKKFTK-----N--Y 67 (371)
T ss_dssp CCEEEEEECCSCCTTT----CSSSCGGGCEEBTEEHHHHHHHHHHTTSCCSCEEEEES-C--HHHHHTTCS-----S--S
T ss_pred CccEEEEECCCCCccC----CCCCCcceEEECCeEHHHHHHHHHHccCCCCeEEEEcC-C--HHHHHHHhC-----C--C
Confidence 5689999999999999 44579999999999999999999998 57999999997 3 234444332 1 3
Q ss_pred EEEEcCCCCChHHHHHHHHhcCCCCcEEEEcCC--ccCCCCchHHHHHHHhcC
Q 013012 80 EVATVPEDVGTAGALRAIAHHLTAKDVLVVSGD--LVSDVPPGAVTAAHRRHD 130 (451)
Q Consensus 80 ~i~~~~~~~gt~~~l~~~~~~l~~~~~lvl~~D--~i~~~~~~~~l~~~~~~~ 130 (451)
.++ ....|+.++++.+++.+..+.++++.|| ++....++.+++.+.+.+
T Consensus 68 ~~v--~~g~g~~~sv~~aL~~l~~d~vlv~~~D~Pli~~~~i~~li~~~~~~~ 118 (371)
T 1w55_A 68 EFI--EGGDTRAESLKKALELIDSEFVMVSDVARVLVSKNLFDRLIENLDKAD 118 (371)
T ss_dssp EEE--ECCSSHHHHHHHHHTTCCSSEEEEEETTCTTCCHHHHHHHHTTGGGCS
T ss_pred EEE--eCCCChHHHHHHHHHhcCCCeEEEEeCCcccCCHHHHHHHHHHHHhcC
Confidence 444 3457888999999988866679999999 556667888888876654
No 90
>3tv0_A Dynactin subunit 6; LEFT-handed beta-helix, ARP11, cytosol, structural; 2.15A {Homo sapiens}
Probab=99.44 E-value=1.4e-12 Score=115.51 Aligned_cols=101 Identities=11% Similarity=0.094 Sum_probs=81.4
Q ss_pred CCceeCCCCeeCCCcEEC---CCCEECCCCEECCCCEEe-----------------ceEECCCCEECCCcEEeceEECCC
Q 013012 344 QNNIIHPSAELGSKTTVG---PHCMLGEGSQMGDKCSVK-----------------RSVIGRHCRIGSNVKVVNSVVMNH 403 (451)
Q Consensus 344 ~~~~i~~~~~i~~~~~i~---~~~~i~~~~~i~~~~~i~-----------------~svig~~~~ig~~~~i~~s~i~~~ 403 (451)
+++.|++++.|++++.|. .++.||++|.|+++|.|. +++||+++.|+.++.+.++.|+++
T Consensus 29 g~V~IG~~~~I~~~~~I~~~~g~i~IG~~~~I~~~~~I~~~~~~~~~~~~~~~~~~~~~Ig~~~~i~~~~~i~~~~Ig~~ 108 (194)
T 3tv0_A 29 GDVTIGPRTVIHPKARIIAEAGPIVIGEGNLIEEQALIINAYPDNITPDTEDPEPKPMIIGTNNVFEVGCYSQAMKMGDN 108 (194)
T ss_dssp SSEEECTTCEECTTCEEEESSSCEEECTTCEECTTCEEEECCCSCC---------CCEEECSSCEECTTCEECCSEECSS
T ss_pred CCCEECCCCEECCCCEEccCCCCeEECCCccccCCcccccccccccccccccCcCCceEECCcceEecceeEeeeeeccc
Confidence 455555555555555552 345677888888888773 368999999999999999999999
Q ss_pred CEECCCcEEe-CeEECCCCEECCCcEEc-ceEECCCCEECCCC
Q 013012 404 VTIGDGCSIQ-GSVICSNAQLQERVALK-DCQVLSLSTSVFLS 444 (451)
Q Consensus 404 ~~Ig~~~~i~-~~ii~~~~~i~~~~~i~-~~~ig~~~~i~~~~ 444 (451)
+.||.++.|. ++.||++|.|++++.|. ++.|++++++...+
T Consensus 109 ~~Ig~~~~I~~gv~IG~~~~IgagsvV~~~~~Ip~~svv~G~p 151 (194)
T 3tv0_A 109 NVIESKAYVGRNVILTSGCIIGACCNLNTFEVIPENTVIYGAD 151 (194)
T ss_dssp CEECTTCEECTTEEECSSCEECTTCEECCCEEECTTEEEESTT
T ss_pred ceecceeeECCeEEECCCCEECCCCEECCCcEECCCCEEECCC
Confidence 9999999995 89999999999999998 59999999986433
No 91
>3pmo_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltr; lipid A biosynthesis pathway, transferase; 1.30A {Pseudomonas aeruginosa}
Probab=99.44 E-value=1.8e-12 Score=126.16 Aligned_cols=104 Identities=15% Similarity=0.218 Sum_probs=60.8
Q ss_pred cCCCceeCCCCeeCCCcEECCCCEECCCCEECCCCEEe--------------------ceEECCCCEECCCcEEe-----
Q 013012 342 SAQNNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVK--------------------RSVIGRHCRIGSNVKVV----- 396 (451)
Q Consensus 342 ~~~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~--------------------~svig~~~~ig~~~~i~----- 396 (451)
+..++.|++++.|++++.|+.++.||++|.|++++.|. +++||++|.||.+++|.
T Consensus 164 Ig~~v~IG~~~~I~~~~~I~~~~~IG~~v~I~~g~~Ig~dgfg~~~~~g~~~~i~~~g~v~IGd~v~IGa~~~I~~g~~~ 243 (372)
T 3pmo_A 164 IGARSVIGEGGWLAPRVTLYHDVTIGARVSIQSGAVIGGEGFGFANEKGVWQKIAQIGGVTIGDDVEIGANTTIDRGALS 243 (372)
T ss_dssp ECTTCEECTTCEECTTCEECTTEEECTTCEECTTCEEEECCCCEEEETTEEEECCCCCCEEECSSCEECTTCEEECCSSS
T ss_pred ECCCCEECCCcccCCCcEEEeeeEECceeeccCCcEEecCcccccccCCcceeccccCCeEECCCCEECCCcEEccCccc
Confidence 33344444444444444555555566666666666653 57788888888888873
Q ss_pred ceEECCCCEECCCcEEe-------------------CeEECCCCEECCCcEEcc-eEECCCCEECCCCc
Q 013012 397 NSVVMNHVTIGDGCSIQ-------------------GSVICSNAQLQERVALKD-CQVLSLSTSVFLSL 445 (451)
Q Consensus 397 ~s~i~~~~~Ig~~~~i~-------------------~~ii~~~~~i~~~~~i~~-~~ig~~~~i~~~~~ 445 (451)
+++|++++.|+.++.|. ++.||++|+|+.++.|.+ +.||++++|++++-
T Consensus 244 ~t~IG~~~~I~~~v~I~~~v~IG~~~~I~~~~~I~~~v~IG~~~~Ig~~a~V~~~v~Ig~~~vI~a~s~ 312 (372)
T 3pmo_A 244 DTLIGNGVKLDNQIMIAHNVQIGDHTAMAACVGISGSAKIGRHCMLAGGVGLVGHIEICDNVFVTGMTM 312 (372)
T ss_dssp CEEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSSCEECTTCEECSSCEECSSEEECTTCE
T ss_pred ceEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCeEEeCCCEECCCCEECCCCEEeeCCE
Confidence 45555555444444442 355666666666666653 66677777766664
No 92
>3ngw_A Molybdopterin-guanine dinucleotide biosynthesis P (MOBA); alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.31A {Archaeoglobus fulgidus}
Probab=99.44 E-value=2.9e-13 Score=121.09 Aligned_cols=113 Identities=19% Similarity=0.260 Sum_probs=84.1
Q ss_pred ceEEEEecCCCCCCCCCCCCCCcccccccCCcchHHHHHHHHHHCCCcEEEEEecCchhhHHHHHhhhhhccCceeeEEE
Q 013012 3 FQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVEVA 82 (451)
Q Consensus 3 ~~avIlAgG~g~Rl~pl~~~~~pK~llpv~gkpli~~~l~~l~~~gi~~iivv~~~~~~~~~i~~~~~~~~~~~~~~~i~ 82 (451)
|.|||||||.|+|| + .||+|+|++|+|||+|+++.+..+ +++|++++. +.+..+.. ..++.++
T Consensus 1 m~aiILAgG~s~Rm----g--~~K~ll~~~G~pli~~~~~~l~~~---~vvvv~~~~---~~~~~~~~-----~~~~~~v 63 (208)
T 3ngw_A 1 MKVAVLVGGVGRRI----G--MEKTEVMLCGKKLIEWVLEKYSPF---QTVFVCRDE---KQAEKLSS-----RYEAEFI 63 (208)
T ss_dssp CEEEEECCCCCTTT----T--SCGGGCEETTEEHHHHHHHHHTTS---EEEEECSSH---HHHHHHHT-----TSCSCEE
T ss_pred CEEEEECCCchhhC----C--CCCcccEECCeeHHHHHHHHhcCC---CEEEEECCH---HHHHHHHH-----hcCCeEE
Confidence 57999999999999 3 899999999999999999999876 888888642 23333221 1234444
Q ss_pred EcC-CCCChHHHHHHHHhcCCCCcEEEEcCC--ccCCCCchHHHHHHHhcCceEE
Q 013012 83 TVP-EDVGTAGALRAIAHHLTAKDVLVVSGD--LVSDVPPGAVTAAHRRHDAVVT 134 (451)
Q Consensus 83 ~~~-~~~gt~~~l~~~~~~l~~~~~lvl~~D--~i~~~~~~~~l~~~~~~~~~~t 134 (451)
... ...|+..+++.+++.+ .+.+ +++|| ++....+..+++.+.+.++++.
T Consensus 64 ~d~~~~~G~~~si~~gl~~~-~~~v-v~~~D~P~i~~~~i~~l~~~~~~~~~~~v 116 (208)
T 3ngw_A 64 WDLHKGVGSIAGIHAALRHF-GSCV-VAAIDMPFVKPEVLEHLYKEGEKAGCDAL 116 (208)
T ss_dssp CCTTCCCSHHHHHHHHHHHH-SSEE-EEETTCTTCCHHHHHHHHHHHHHHTCSEE
T ss_pred ecCCCCCChHHHHHHHHHHc-CCCE-EEECCccCCCHHHHHHHHHHhhcCCCCEE
Confidence 322 2368889999998877 6667 99999 5666678888888765455543
No 93
>3eg4_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid, beta helix, acyltransferase, amino-acid biosynthesis, cytoplasm; 1.87A {Brucella suis}
Probab=99.43 E-value=6e-13 Score=125.42 Aligned_cols=103 Identities=17% Similarity=0.275 Sum_probs=73.2
Q ss_pred CCCceeCCCCeeCCCcEECCCCEECCCCEECCCCEEec-eEECCCCEECCCcEEec---------eEECCCCEECCCcEE
Q 013012 343 AQNNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVKR-SVIGRHCRIGSNVKVVN---------SVVMNHVTIGDGCSI 412 (451)
Q Consensus 343 ~~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~~-svig~~~~ig~~~~i~~---------s~i~~~~~Ig~~~~i 412 (451)
..+++|++++.|+++ +|++++.||++|.|+.++.|.+ +.||++|.|++++.|.+ ++|+++|.||.+|.|
T Consensus 139 ~~~v~Ig~g~~I~~~-~I~~~~~IG~~~~I~~~~~Ig~~~~IG~~v~I~~~~~i~~~~~~~~~~~v~IGd~v~IG~~a~I 217 (304)
T 3eg4_A 139 RHSAYIAPNAILMPS-FVNLGAYVDKGAMIDTWATVGSCAQIGKNVHLSGGVGIGGVLEPMQAGPTIIEDNCFIGARSEV 217 (304)
T ss_dssp BTTCEECTTCEECSE-EECTTCEECTTCEECTTEEECTTCEECTTCEECTTCEECCCCSSTTCCCCEECTTCEECTTCEE
T ss_pred CCCcEECCCCEEeCC-EECCCCEECCCcEEcCCcEECCCCccCCCcEECCCCEECCccccCccCCeEEcCCCEECCCCEE
Confidence 344455555555544 5555666666666666666664 67777777777777766 899999999999977
Q ss_pred -eCeEECCCCEECCCcEEcc--------------eEECCCCEECCCCcc
Q 013012 413 -QGSVICSNAQLQERVALKD--------------CQVLSLSTSVFLSLS 446 (451)
Q Consensus 413 -~~~ii~~~~~i~~~~~i~~--------------~~ig~~~~i~~~~~~ 446 (451)
.++.||++++|+++++|.. +.|++++++.+++..
T Consensus 218 ~~gv~IG~~avIgagsvV~~g~~Igd~~~g~~~~~~Ip~~svV~~Gs~v 266 (304)
T 3eg4_A 218 VEGCIVREGSVLGMGVFIGKSTKIVDRATGEVFYGEVPPYSVVVAGTMP 266 (304)
T ss_dssp CTTCEECTTCEECTTCEECTTCCEEETTTCCEECSEECTTEEEEEEEEE
T ss_pred cCCcEECCCcEECCCCEEcCCeEECccceeeeccCEeCCCCEEecCcEe
Confidence 5888999999999888873 357777777766543
No 94
>3eh0_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase; LPXD, LEFT-handed parallel beta helix, acyl carrier protein, antibiotic resistance; 2.60A {Escherichia coli}
Probab=99.43 E-value=1.8e-12 Score=125.07 Aligned_cols=30 Identities=7% Similarity=-0.010 Sum_probs=16.6
Q ss_pred eEECCCCEECCCcEEc-ceEECCCCEECCCC
Q 013012 415 SVICSNAQLQERVALK-DCQVLSLSTSVFLS 444 (451)
Q Consensus 415 ~ii~~~~~i~~~~~i~-~~~ig~~~~i~~~~ 444 (451)
+.||++|+|+.++.|. ++.||++++|++++
T Consensus 259 v~IG~~~~Ig~~s~V~~~v~Ig~~~vv~a~s 289 (341)
T 3eh0_A 259 LKIGRYCMIGGASVINGHMEICDKVTVTGMG 289 (341)
T ss_dssp EEECTTCEECTTCEECSSEEECSSEEECTTC
T ss_pred cEECCCcEEcCCCEECCCCEECCCCEEeeCC
Confidence 4455555555555555 25566666666555
No 95
>3vbi_A ANTD, galactoside O-acetyltransferase; anthrose, acylated sugar, LEFT-handed beta helix, sugar N-AC transferase; HET: COA 0FX; 1.80A {Bacillus cereus} PDB: 3vbj_A* 3vbm_A* 3vbk_A* 3vbp_A* 3vbl_A* 3vbn_A*
Probab=99.43 E-value=7.4e-13 Score=118.48 Aligned_cols=117 Identities=15% Similarity=0.094 Sum_probs=90.7
Q ss_pred HHchhccccccccCCccccCC--CceeCCCCeeCCCcEECCCCEECCCCEECCCCEEe----ceEECCCCEECCCcEE--
Q 013012 324 DINRDVIGEANHLSGYNFSAQ--NNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVK----RSVIGRHCRIGSNVKV-- 395 (451)
Q Consensus 324 ~~~~~~l~~~~~~~~~~~~~~--~~~i~~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~----~svig~~~~ig~~~~i-- 395 (451)
+.....+.+...+.....+.. +..|++++.|++++.|.+++.||++|.|+++|.|. +++||++|.|+++|.|
T Consensus 29 ~~~~~~ig~~~~I~~~~~i~~~~~v~IG~~~~I~~~~~I~~~v~IG~~~~I~~~~~I~~~~~~~~IG~~~~Ig~~~~I~~ 108 (205)
T 3vbi_A 29 KIGFLSVGKNVLISKKASIYNPGVISIGNNVRIDDFCILSGKVTIGSYSHIAAYTALYGGEVGIEMYDFANISSRTIVYA 108 (205)
T ss_dssp TTCCSEECSSEEEBTTSEEESGGGEEECSSEEECTTCEEEEEEEECSSEEECTTCEEEEEEEEEEECTTCEECTTCEEES
T ss_pred hcCCeEECCCCEECCCeEEccCCeeEECCCCEECCCCEEccceEECCCCEECCCeEEEcCCccEEECCCCEECCCcEEEe
Confidence 333334444444444333333 67788888888888888889999999999999993 4999999999999999
Q ss_pred ------------------------eceEECCCCEECCCcEEe-CeEECCCCEECCCcEEcceEECCCCEEC
Q 013012 396 ------------------------VNSVVMNHVTIGDGCSIQ-GSVICSNAQLQERVALKDCQVLSLSTSV 441 (451)
Q Consensus 396 ------------------------~~s~i~~~~~Ig~~~~i~-~~ii~~~~~i~~~~~i~~~~ig~~~~i~ 441 (451)
.+++|+++|.||.+|.|. ++.||++++|+++++|... |.+++++.
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~IG~~v~IG~~~~I~~gv~Ig~~~~Ig~gsvV~~~-v~~~~v~~ 178 (205)
T 3vbi_A 109 AIDDFSGNALMGPTIPNQYKNVKTGKVILKKHVIIGAHSIIFPNVVIGEGVAVGAMSMVKES-LDDWYIYV 178 (205)
T ss_dssp EECCCSSSSCCSTTSCGGGCCCEECCEEECTTCEECTTCEECSSCEECTTCEECTTCEECSC-BCTTEEEE
T ss_pred CCCCcccccccCcccccccceeccCCEEECCCCEECCCCEEcCCCEECCCCEEcCCCEECCc-cCCCeEEE
Confidence 468999999999999885 8899999999999988854 56666654
No 96
>3t57_A UDP-N-acetylglucosamine O-acyltransferase domain- protein; LEFT-handed parallel beta helix, lipid A biosynthesis, lipid synthesis; 2.10A {Arabidopsis thaliana}
Probab=99.43 E-value=2.1e-12 Score=122.59 Aligned_cols=30 Identities=17% Similarity=0.085 Sum_probs=14.9
Q ss_pred EECCCCEECCCcEEc-ceEECCCCEECCCCc
Q 013012 416 VICSNAQLQERVALK-DCQVLSLSTSVFLSL 445 (451)
Q Consensus 416 ii~~~~~i~~~~~i~-~~~ig~~~~i~~~~~ 445 (451)
.||++++|+.++.|. ++.||++++|++++.
T Consensus 170 ~Igd~~~Ig~~~~V~~~v~IG~~a~ig~gs~ 200 (305)
T 3t57_A 170 VVEDNTHTAGASVVHQFCHIGSFAFIGGGSV 200 (305)
T ss_dssp EECSSCEECTTCEECTTCEECTTCEECTTCE
T ss_pred EECCceEEcCCCEEcCCeEECCCCEEcCCCe
Confidence 444444444444444 255555555555553
No 97
>4e79_A UDP-3-O-acylglucosamine N-acyltransferase; lipopolysaccaride synthesis; 2.66A {Acinetobacter baumannii} PDB: 4e75_A
Probab=99.42 E-value=2e-12 Score=125.27 Aligned_cols=13 Identities=15% Similarity=0.245 Sum_probs=8.6
Q ss_pred cceEEeechHHHH
Q 013012 209 DAHMYAFNRSVLQ 221 (451)
Q Consensus 209 ~~giYi~~~~~l~ 221 (451)
.++..+++++...
T Consensus 59 ~a~~~i~~~~~~~ 71 (357)
T 4e79_A 59 RAGAYIVTAALKE 71 (357)
T ss_dssp CCSEEEECHHHHH
T ss_pred CCEEEEEcHHHhh
Confidence 4577778877543
No 98
>1j2z_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; UDP-N-acetylglucosamine acyltransferase, LPXA, LEFT-handed B structure; HET: SOG TLA; 2.10A {Helicobacter pylori} SCOP: b.81.1.1
Probab=99.42 E-value=1.9e-12 Score=120.63 Aligned_cols=64 Identities=16% Similarity=0.127 Sum_probs=29.8
Q ss_pred eEECCCCEECCCcEEe--------ceEECCCCEECCCcEE-eCeEECCCCEECCCcEEc-ceEECCCCEECCCC
Q 013012 381 SVIGRHCRIGSNVKVV--------NSVVMNHVTIGDGCSI-QGSVICSNAQLQERVALK-DCQVLSLSTSVFLS 444 (451)
Q Consensus 381 svig~~~~ig~~~~i~--------~s~i~~~~~Ig~~~~i-~~~ii~~~~~i~~~~~i~-~~~ig~~~~i~~~~ 444 (451)
++||++|.|+++++|. .+.|++++.|++++.| .+++||++++|+.++.+. +++||+++.|+.++
T Consensus 80 ~~IG~~~~I~~~~~I~~~~~~~~~~~~IG~~~~I~~~~~I~~~~~IG~~~~I~~~~~i~~~v~Igd~~~Ig~~a 153 (270)
T 1j2z_A 80 LIIGEDNLIREFCMINPGTEGGIKKTLIGDKNLLMAYVHVAHDCVIGSHCILANGVTLAGHIEIGDYVNIGGLT 153 (270)
T ss_dssp EEECSSCEECTTCEECCCCTTTTSEEEECSSCEECTTCEECTTCEECSSCEECTTCEECTTCEECSSCEECTTC
T ss_pred eEECCCCEECCCeEEcCCeecCCccEEECCCcEECcccccCCCcEECCCcEEcCCccccCccEECCCeEEecCC
Confidence 4444555555444443 2445555555554444 244555555554444443 24444444444433
No 99
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=99.42 E-value=3.3e-12 Score=115.57 Aligned_cols=32 Identities=13% Similarity=0.162 Sum_probs=12.2
Q ss_pred eEECCCCEECCCcEEeC-eEECCCCEECCCcEE
Q 013012 398 SVVMNHVTIGDGCSIQG-SVICSNAQLQERVAL 429 (451)
Q Consensus 398 s~i~~~~~Ig~~~~i~~-~ii~~~~~i~~~~~i 429 (451)
|+|++++.|+.++.|.+ +.||+++.|+.+++|
T Consensus 148 ~~Ig~~~~i~~~~~i~~~v~Ig~~~~Ig~~~~i 180 (220)
T 4ea9_A 148 CRLGAACHLGPASALAGGVSVGERAFLGVGARV 180 (220)
T ss_dssp CEECTTCEECTTCEECSSCEECTTCEECTTCEE
T ss_pred CEECCCCEECCCCEEcCCCEECCCCEECCCCEE
Confidence 33333333333333322 333333333333333
No 100
>2qia_A UDP-N-acetylglucosamine acyltransferase; LEFT-handed parallel beta helix; HET: U20; 1.74A {Escherichia coli K12} SCOP: b.81.1.1 PDB: 1lxa_A 2jf3_A* 2aq9_A* 2qiv_X* 2jf2_A
Probab=99.42 E-value=2.6e-12 Score=119.54 Aligned_cols=105 Identities=21% Similarity=0.294 Sum_probs=81.0
Q ss_pred cccCCCceeCCCCeeCCCcEECCCCEECCCCEECCCCEEe-ceEECCCCEECCCcEEe-------------ceEECCCCE
Q 013012 340 NFSAQNNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVK-RSVIGRHCRIGSNVKVV-------------NSVVMNHVT 405 (451)
Q Consensus 340 ~~~~~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~-~svig~~~~ig~~~~i~-------------~s~i~~~~~ 405 (451)
..+.+++.+++++.|+++++|++++.||++|.|+++|.|. +++||++|.|++++.|. +++|++++.
T Consensus 12 a~I~~~a~Ig~~v~I~~~~~I~~~v~IG~~~~I~~~~~I~~~~~IG~~~~I~~~~~I~~~~~~~~~~g~~~~~~IG~~~~ 91 (262)
T 2qia_A 12 AIVEEGASIGANAHIGPFCIVGPHVEIGEGTVLKSHVVVNGHTKIGRDNEIYQFASIGEVNQDLKYAGEPTRVEIGDRNR 91 (262)
T ss_dssp CEECTTCEECTTCEECTTCEECTTEEECTTCEECSSCEECSEEEECSSCEECTTCEEEECCSCTTCCSCCCEEEECSSCE
T ss_pred CEECCCCEECCCCEECCCCEECCCCEECCCcEECCCCEECCCcEECCCCEEecceEECcCCccccccCCccceEECCCce
Confidence 3444566666777777777777777788888888888887 58899999999999996 688999999
Q ss_pred ECCCcEEeC--------eEECCCCEECCCcEEc-ceEECCCCEECCCC
Q 013012 406 IGDGCSIQG--------SVICSNAQLQERVALK-DCQVLSLSTSVFLS 444 (451)
Q Consensus 406 Ig~~~~i~~--------~ii~~~~~i~~~~~i~-~~~ig~~~~i~~~~ 444 (451)
|++++.|.. ++||+++.|++++.|. +|.||+++++.+++
T Consensus 92 Ig~~~~I~~~~~~~~~~~~IG~~~~Ig~~~~I~~~~~Ig~~~~i~~~~ 139 (262)
T 2qia_A 92 IRESVTIHRGTVQGGGLTKVGSDNLLMINAHIAHDCTVGNRCILANNA 139 (262)
T ss_dssp ECTTCEEECCCTTTTSEEEECSSCEECTTCEECTTCEECSSCEECTTC
T ss_pred eCCCCEEcCCccCCCCcCEECCCcEEeeeeEECCCCEECCCeEECCcc
Confidence 999999863 8888888888887774 46666666666554
No 101
>3r1w_A Carbonic anhydrase; beta-helix, lyase; 1.73A {Unidentified}
Probab=99.42 E-value=8.8e-13 Score=116.42 Aligned_cols=99 Identities=14% Similarity=0.187 Sum_probs=82.2
Q ss_pred CCCceeCCCCeeCCCcEECC---CCEECCCCEECCCCEEece------------EECCCCEECCCcEEeceEECCCCEEC
Q 013012 343 AQNNIIHPSAELGSKTTVGP---HCMLGEGSQMGDKCSVKRS------------VIGRHCRIGSNVKVVNSVVMNHVTIG 407 (451)
Q Consensus 343 ~~~~~i~~~~~i~~~~~i~~---~~~i~~~~~i~~~~~i~~s------------vig~~~~ig~~~~i~~s~i~~~~~Ig 407 (451)
.++..|++++.|++++.|.+ ++.||++|.|+++|.|..+ +||++|.|+++|.|.+++|+++|.||
T Consensus 35 ~~~v~IG~~~~I~~~~~i~~~~~~i~IG~~~~I~~~~~I~~~~~~~~~~~~~~~~Ig~~~~Ig~~~~i~~~~Ig~~~~Ig 114 (189)
T 3r1w_A 35 IGDVELGDDCSVWPLAVIRGDMHHIRIGARTSVQDGSVLHITHASDYNPGGYPLIIGDDVTIGHQAMLHGCTIGNRVLIG 114 (189)
T ss_dssp EEEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECBCCSSSSTTCBCEEECSSEEECTTCEEESCEECSSEEEC
T ss_pred eeeeEECCCCEECCCCEEecCCCceEECCCCEECCCCEEecCCcccCCCCCCCeEECCCCEECCCCEEeCcEECCCcEEC
Confidence 34555666666666666652 3477889999999988754 99999999999999999999999999
Q ss_pred CCcEE-eCeEECCCCEECCCcEEcc-eEECCCCEEC
Q 013012 408 DGCSI-QGSVICSNAQLQERVALKD-CQVLSLSTSV 441 (451)
Q Consensus 408 ~~~~i-~~~ii~~~~~i~~~~~i~~-~~ig~~~~i~ 441 (451)
.++.| .++.||++++|+++++|.. ..|++++++.
T Consensus 115 ~~~~i~~~v~Ig~~~~Ig~~s~V~~g~~i~~~~vv~ 150 (189)
T 3r1w_A 115 MKSMIMDGAIVEDEVIVAAGATVSPGKVLESGFVYM 150 (189)
T ss_dssp TTCEECTTCEECSSCEECTTCEECTTCEECTTEEEE
T ss_pred CCCEEcCCCEECCCCEEccCCEECCCCEeCCCCEEE
Confidence 99998 5899999999999999984 8889998885
No 102
>3fs8_A QDTC; acetyltransferase, natural product, deoxysugar; HET: ACO; 1.70A {Thermoanaerobacteriumthermosaccharolyticum} PDB: 3fsb_A* 3fsc_A*
Probab=99.39 E-value=4.5e-12 Score=118.67 Aligned_cols=85 Identities=19% Similarity=0.264 Sum_probs=57.6
Q ss_pred CEECCCCEECCCCEEe-ceEECCCCEECCCcEEe-ceEECCCCEECCCcEEe-CeEECCCCEECCCcEEc-ceEECCCCE
Q 013012 364 CMLGEGSQMGDKCSVK-RSVIGRHCRIGSNVKVV-NSVVMNHVTIGDGCSIQ-GSVICSNAQLQERVALK-DCQVLSLST 439 (451)
Q Consensus 364 ~~i~~~~~i~~~~~i~-~svig~~~~ig~~~~i~-~s~i~~~~~Ig~~~~i~-~~ii~~~~~i~~~~~i~-~~~ig~~~~ 439 (451)
+.||++|.|+++|.|. +++||++|.||+++.|+ ++.|++++.|+.++.|. +++||+++.|++++.|. ++.|++++.
T Consensus 71 ~~Ig~~~~I~~~~~i~~~~~Ig~~~~Ig~~~~I~~~~~Ig~~~~Ig~~~~i~~~~~IG~~~~I~~~~~I~~~~~ig~~~~ 150 (273)
T 3fs8_A 71 LIIGENALIRTENVIYGDTIIGDNFQTGHKVTIRENTKIGNNVKIGTLSDIQHHVYIGNYVNIHSNVFVGEKSIIKDFVW 150 (273)
T ss_dssp EEECTTCEECTTCEEESSCEECTTCEECSSCEECSSCEECSSCEECTTCEECSSCEECSSCEECTTCEECTTCEECTTCE
T ss_pred eEECCCCEECCCCEEeCCCEECCCCEECCceEECCCCEECCCCEECccceeCCceEECCceEECCCCEECCCceeCCcee
Confidence 3344444444455553 46677777777777775 77777777777777774 67777777777777777 477777777
Q ss_pred ECCCCccCC
Q 013012 440 SVFLSLSSN 448 (451)
Q Consensus 440 i~~~~~~~~ 448 (451)
+.+++...+
T Consensus 151 i~~~~~i~~ 159 (273)
T 3fs8_A 151 LFPHVVLTN 159 (273)
T ss_dssp ECTTCEECC
T ss_pred ecCceEecC
Confidence 777765443
No 103
>3gos_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransfera acyltransferase; 1.80A {Yersinia pestis} SCOP: b.81.1.2 PDB: 1kgq_A* 1kgt_A* 2tdt_A* 3tdt_A* 3bxy_A 1tdt_A
Probab=99.39 E-value=1.6e-12 Score=121.30 Aligned_cols=87 Identities=14% Similarity=0.271 Sum_probs=62.6
Q ss_pred CCceeCCCCeeCCCcEECCCCEECCCCEECCCCEEec-eEECCCCEECCCcEEe---------ceEECCCCEECCCcEEe
Q 013012 344 QNNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVKR-SVIGRHCRIGSNVKVV---------NSVVMNHVTIGDGCSIQ 413 (451)
Q Consensus 344 ~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~~-svig~~~~ig~~~~i~---------~s~i~~~~~Ig~~~~i~ 413 (451)
+++.|++++.|+++ +++.++.||++|.|++++.|.+ ++||++|.|++++.|. +++|+++|.||.+|.|.
T Consensus 115 ~~~~Ig~g~~I~~~-~i~~~~~IG~~~~I~~~~~Ig~~~~IG~~v~I~~~~~i~g~~~~~~~~~v~IGd~v~IG~~a~I~ 193 (276)
T 3gos_A 115 KGAFIARNTVLMPS-YVNIGAFVDEGTMVDTWATVGSCAQIGKNVHLSGGVGIGGVLEPLQANPTIIEDNCFVGARSEVV 193 (276)
T ss_dssp TTCEECTTCEECSE-EECTTCEECTTCEECTTEEECTTCEECTTCEECTTCEECCCCSSTTSCCCEECTTCEECTTCEEC
T ss_pred CCCEECCCCEEcCC-EEcCCeEECCCCEECCCCEECCCCEECCCCEECCCCEECCccccCCCCCeEECCCCEECCCCEEC
Confidence 44445555555444 4555677777777777777765 7788888888888774 48888888888888884
Q ss_pred -CeEECCCCEECCCcEEcc
Q 013012 414 -GSVICSNAQLQERVALKD 431 (451)
Q Consensus 414 -~~ii~~~~~i~~~~~i~~ 431 (451)
++.||++|+|+++++|..
T Consensus 194 ~gv~IG~~avIgagsvV~~ 212 (276)
T 3gos_A 194 EGVIVEEGSVISMGVFIGQ 212 (276)
T ss_dssp TTCEECTTCEECTTCEECT
T ss_pred CCCEECCCCEECCCCEECC
Confidence 788888888888888773
No 104
>3t57_A UDP-N-acetylglucosamine O-acyltransferase domain- protein; LEFT-handed parallel beta helix, lipid A biosynthesis, lipid synthesis; 2.10A {Arabidopsis thaliana}
Probab=99.38 E-value=6.7e-12 Score=119.14 Aligned_cols=57 Identities=21% Similarity=0.181 Sum_probs=30.5
Q ss_pred ccccCCCceeCCCCeeCCCcEECCCCEECCCCEECCCCEEe-----ceEECCCCEECCCcEE
Q 013012 339 YNFSAQNNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVK-----RSVIGRHCRIGSNVKV 395 (451)
Q Consensus 339 ~~~~~~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~-----~svig~~~~ig~~~~i 395 (451)
+..+.+++.|+.++.|+++++|.+++.||++|.|++++.|. +++||++|.|++++.|
T Consensus 31 ~~~I~~~v~IG~~~~I~~~~~I~g~~~IG~~~~I~~~a~I~~d~~g~~~IG~~~~Ig~~a~I 92 (305)
T 3t57_A 31 YCTIGSSVKLGNGCKLYPSSHVFGNTELGESCVLMTGAVVGDELPGYTFIGCNNIIGHHAVV 92 (305)
T ss_dssp TCEECTTEEECTTCEECTTCEECSSEEECTTCEECTTCEECCSSSEEEEECSSCEECTTCEE
T ss_pred CCEECCCCEECCCCEECCCcEECCCcEECCCcEEccCcEeccCCCCceEECCceEECCccEe
Confidence 33344444455555555555555555555555555555554 3556666666666655
No 105
>3tk8_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid; 1.80A {Burkholderia pseudomallei}
Probab=99.37 E-value=1.2e-12 Score=123.69 Aligned_cols=83 Identities=18% Similarity=0.330 Sum_probs=41.1
Q ss_pred eeCCCCeeCCCcEECCCCEECCCCEECCCCEEec-eEECCCCEECCCcEE------ec---------eEECCCCEECCCc
Q 013012 347 IIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVKR-SVIGRHCRIGSNVKV------VN---------SVVMNHVTIGDGC 410 (451)
Q Consensus 347 ~i~~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~~-svig~~~~ig~~~~i------~~---------s~i~~~~~Ig~~~ 410 (451)
++++++.|++++.|+++ +++.++.||++|.|.+ ++||++|.||++|.| .+ ++|+++|.||.+|
T Consensus 153 ~I~~~~~IG~g~~I~~~-~I~~g~~IG~~~~I~~~~~Ig~~~~IG~~v~I~~~~~I~~~~~~~~~~~v~IGd~v~IG~~a 231 (316)
T 3tk8_A 153 IARRGSFIAKNVVLMPS-YTNIGAYVDEGTMVDTWATVGSCAQIGKNVHLSGGVGIGGVLEPLQANPVIIEDNCFIGARS 231 (316)
T ss_dssp EEBTTCEECTTCEECSE-EECTTCEECTTCEECTTEEECTTCEECTTCEECTTCEECCCCSSTTSCCCEECTTCEECTTC
T ss_pred EEeCCcEEcCCCEECCC-EEeCCCEECCCCEEccceEECCCCEECCCCEEcCCCEECCCcccccCCCcEECCCCEECCCC
Confidence 33333334444433322 3333445555554443 444444444444444 33 5666666666666
Q ss_pred EE-eCeEECCCCEECCCcEEc
Q 013012 411 SI-QGSVICSNAQLQERVALK 430 (451)
Q Consensus 411 ~i-~~~ii~~~~~i~~~~~i~ 430 (451)
.| .++.||++++|+++++|.
T Consensus 232 ~I~~gv~IG~g~vIgagsvV~ 252 (316)
T 3tk8_A 232 EVVEGVIVEENSVISMGVYLG 252 (316)
T ss_dssp EECTTCEECTTCEECTTCEEC
T ss_pred EEcCCCEECCCCEEcCCCEEc
Confidence 65 356666666666666665
No 106
>3c8v_A Putative acetyltransferase; YP_390128.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.28A {Desulfovibrio desulfuricans subsp}
Probab=99.37 E-value=2.2e-12 Score=128.83 Aligned_cols=97 Identities=14% Similarity=0.259 Sum_probs=86.8
Q ss_pred CCceeCCCCeeCCCcEECCCCEECCCCEECCCCEEeceEECCCCEECCCcEEeceEECCCCEECCCcEEeC-----eEEC
Q 013012 344 QNNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVKRSVIGRHCRIGSNVKVVNSVVMNHVTIGDGCSIQG-----SVIC 418 (451)
Q Consensus 344 ~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~~svig~~~~ig~~~~i~~s~i~~~~~Ig~~~~i~~-----~ii~ 418 (451)
+++.|++++.|++++.| .++.||++|.|+++|.|.+++||++|.||+++.|.+++|+++|.||.+|.|.+ +.||
T Consensus 290 g~v~IG~~~~I~~~a~I-~~v~IG~~~~I~~~~~I~~~vIG~~~~Ig~~a~I~gv~IGd~v~IG~~a~I~~~~~~~v~IG 368 (496)
T 3c8v_A 290 GDTVIGENVLVSQRAYL-DNAWMGKGSNAQENCYIINSRLERNCVTAHGGKIINAHLGDMIFTGFNSFLQGSESSPLKIG 368 (496)
T ss_dssp SSCEECTTCEECTTCEE-EEEEECTTCEECTTCEEEEEEEEESCEECTTCEEESEEEEETCEECTTCEEECCSSSCEEEC
T ss_pred CCeEECCCCEECCCcEE-eceEecCCCEECCCceEeceEeCCCCEECCCcEEcCceECCCcEECCCCEEeCCCCcceEEC
Confidence 45667777777777777 67889999999999999999999999999999999999999999999999975 5999
Q ss_pred CCCEECCCcEEc---ceEECCCCEEC
Q 013012 419 SNAQLQERVALK---DCQVLSLSTSV 441 (451)
Q Consensus 419 ~~~~i~~~~~i~---~~~ig~~~~i~ 441 (451)
++|.||.+++|. ++.|++++++.
T Consensus 369 ~~a~IGagsvV~~~~~~~I~~~s~v~ 394 (496)
T 3c8v_A 369 DGCVVMPHTIIDLEEPLEIPAGHLVW 394 (496)
T ss_dssp TTCEECTTCEEECSSCEEECSSEEEC
T ss_pred CCCEECCCCEEecCCCcEeCCCCEEE
Confidence 999999999998 58999999887
No 107
>2iu8_A LPXD, UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; UDP-3- O-acyl-glucosamine N-acyltransferase, lipid A biosynthesis; HET: PLM UD1; 2.2A {Chlamydia trachomatis} PDB: 2iu9_A* 2iua_A*
Probab=99.37 E-value=9.1e-12 Score=121.76 Aligned_cols=105 Identities=9% Similarity=0.152 Sum_probs=64.3
Q ss_pred cCCCceeCCCCeeCCCcEECCCCEECCCCEECCCCEEe---------------------ceEECCCCEECCCcEEec---
Q 013012 342 SAQNNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVK---------------------RSVIGRHCRIGSNVKVVN--- 397 (451)
Q Consensus 342 ~~~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~---------------------~svig~~~~ig~~~~i~~--- 397 (451)
+..++.|+.++.|++++.|+.++.||++|.|++++.|. +++||++|.||++++|..
T Consensus 169 Ig~~~~IG~~~~I~~~~~I~~~~~IG~~~~I~~~~~Ig~~~~~~~~~~~~~~~~i~~~g~v~Ig~~v~IG~~~~I~~~~~ 248 (374)
T 2iu8_A 169 IGAYSTVGEHSYIHPRVVIRERVSIGKRVIIQPGAVIGSCGFGYVTSAFGQHKHLKHLGKVIIEDDVEIGANTTIDRGRF 248 (374)
T ss_dssp ECTTCEECTTCEECTTCEECSSEEECTTCEECTTCEEEEECSCEEEETTTEEEECCCCCCEEECTTCEECTTCEEEECSS
T ss_pred ECCCcEECCceeeCCCcEEcccceECCCCEECCCCEECcCCcccccccCCceeEeeeeccEEECCCCEECCCcEEccCcc
Confidence 33444455555555555555566666666777666663 377888888888887741
Q ss_pred --------------eEECCCCEECCCcEEe-------CeEECCCCEECCCcEEc-ceEECCCCEECCCCcc
Q 013012 398 --------------SVVMNHVTIGDGCSIQ-------GSVICSNAQLQERVALK-DCQVLSLSTSVFLSLS 446 (451)
Q Consensus 398 --------------s~i~~~~~Ig~~~~i~-------~~ii~~~~~i~~~~~i~-~~~ig~~~~i~~~~~~ 446 (451)
+.|+++|+||++|.|. ++.||++|.|+.++.|. ++.||++++|++++..
T Consensus 249 ~~t~ig~~~~i~~~v~I~~~v~IG~~~~i~~~~~v~~~~~Ig~~~~Ig~~~~i~~~v~Ig~~~~I~a~s~V 319 (374)
T 2iu8_A 249 KHSVVREGSKIDNLVQIAHQVEVGQHSMIVAQAGIAGSTKIGNHVIIGGQAGITGHICIADHVIMMAQTGV 319 (374)
T ss_dssp SCEEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSSCEECTTCEECSSCEECTTEEECTTCEE
T ss_pred cceeECCCcEECCccccCCccEECCCCEEccCcccCCCcEECCCeEEecCcEECCCcccCCCcEEccCcee
Confidence 2233344444444332 45677777777777766 3777777777777643
No 108
>3r5d_A Tetrahydrodipicolinate N-succinyletransferase; 1.80A {Pseudomonas aeruginosa} PDB: 3r5b_A* 3r5c_A* 3r5a_A
Probab=99.36 E-value=6.9e-13 Score=123.14 Aligned_cols=49 Identities=14% Similarity=0.277 Sum_probs=25.6
Q ss_pred eEECCCCEECCCcEEec---------eEECCCCEECCCcEEeCeEECCCCEECCCcEEc
Q 013012 381 SVIGRHCRIGSNVKVVN---------SVVMNHVTIGDGCSIQGSVICSNAQLQERVALK 430 (451)
Q Consensus 381 svig~~~~ig~~~~i~~---------s~i~~~~~Ig~~~~i~~~ii~~~~~i~~~~~i~ 430 (451)
++||++|.|+++|.|.. ++|+++|.||.++.| ++.||++|+|++|++|.
T Consensus 231 v~IGdnv~IgpGa~IgG~~~~~~~~~V~IGdnv~IGAnAtI-GVtIGd~~iIGAGSVVt 288 (347)
T 3r5d_A 231 VFVGKGSDLGGGCSTMGTLSGGGNIVISVGEGCLIGANAGI-GIPLGDRNIVEAGLYIT 288 (347)
T ss_dssp CEECTTEEECTTCEECC------CCCCEECTTCEECTTCEE-CSCBCTTCEECTTCEEC
T ss_pred EEECCCCEECCCCEEccccCCCCccceEECCCCEECCCCEE-eeEECCCCEECCCCEEC
Confidence 45555555555555543 455555555555555 45555555555544444
No 109
>3mqg_A Lipopolysaccharides biosynthesis acetyltransferas; beta helix, acetyl transferase, transferase; HET: ACO U5P UDP PE4; 1.43A {Bordetella petrii} PDB: 3mqh_A*
Probab=99.35 E-value=7.3e-12 Score=110.75 Aligned_cols=94 Identities=18% Similarity=0.297 Sum_probs=49.2
Q ss_pred ceeCCCCeeCCCcEECCCCEECCCCEECCCCEEe-ceEECCCCEECCCcEE----------------eceEECCCCEECC
Q 013012 346 NIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVK-RSVIGRHCRIGSNVKV----------------VNSVVMNHVTIGD 408 (451)
Q Consensus 346 ~~i~~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~-~svig~~~~ig~~~~i----------------~~s~i~~~~~Ig~ 408 (451)
+.|++++.|++++.|++++.||++|.|++++.|. +++||++|.||+++.+ .+++|+++|.||.
T Consensus 34 ~~IG~~~~Ig~~~~I~~~~~IG~~~~I~~~~~I~~~~~Ig~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~Ig~~v~IG~ 113 (192)
T 3mqg_A 34 AEIGEGCSLGQNVFVGNRVRIGNRVKIQNNVSVYDNVFLEDDVFCGPSMVFTNVYNPRAAIERKSEYRDTIVRQGATLGA 113 (192)
T ss_dssp CEECTTCEECTTCEECSSCEECSSCEECTTCEECTTEEECTTCEECTTCBCCSCSSCBTTBCCGGGCCCEEECTTCEECT
T ss_pred cEECCCCEECCCEEECCceEECCCcEEcCCcEEeCCCEECCCCEECCceEEecccCCccccccccccCCcEECCCcEECC
Confidence 3333333333333333334444444444444442 2444555555544444 2367777777777
Q ss_pred CcEEe-CeEECCCCEECCCcEEcceEECCCCEE
Q 013012 409 GCSIQ-GSVICSNAQLQERVALKDCQVLSLSTS 440 (451)
Q Consensus 409 ~~~i~-~~ii~~~~~i~~~~~i~~~~ig~~~~i 440 (451)
++.|. ++.||+++.|+++++|... |.+++++
T Consensus 114 ~~~I~~g~~Ig~~~~IgagsvV~~~-vp~~~v~ 145 (192)
T 3mqg_A 114 NCTVVCGATIGRYAFVGAGAVVNKD-VPDFALV 145 (192)
T ss_dssp TCEECTTCEECTTCEECTTCEECSC-BCTTEEE
T ss_pred CCEECCCCEECCCCEEcCCCEECcc-cCCCCEE
Confidence 77773 6777777777777777632 3444433
No 110
>3bfp_A Acetyltransferase; LEFT-handed beta helix, COA binding protein, N-glycan biosynthesis, bacillosamine, structural genomics, MKBSGI; HET: FLC; 1.75A {Campylobacter jejuni} SCOP: b.81.1.8 PDB: 2vhe_A* 3bsw_A* 3bss_A* 3bsy_A* 2npo_A
Probab=99.34 E-value=1.5e-11 Score=108.90 Aligned_cols=88 Identities=17% Similarity=0.272 Sum_probs=42.9
Q ss_pred cCCCceeCCCCeeC--CCcEECCCCEECCCCEECCCCEEe-ceEECCCCEECCCcEEe-c------eEECCCCEECCCcE
Q 013012 342 SAQNNIIHPSAELG--SKTTVGPHCMLGEGSQMGDKCSVK-RSVIGRHCRIGSNVKVV-N------SVVMNHVTIGDGCS 411 (451)
Q Consensus 342 ~~~~~~i~~~~~i~--~~~~i~~~~~i~~~~~i~~~~~i~-~svig~~~~ig~~~~i~-~------s~i~~~~~Ig~~~~ 411 (451)
+++.+++++++.|+ +++.|+++++|+++++||++|.|. +++|+++|.||++|+|. + ++|++++.||.++.
T Consensus 78 i~~~a~i~~~~~Ig~~~g~~I~~~~~I~~~~~IG~~~~I~~~~~i~~~~~Ig~~~~I~~~~~i~~~~~Ig~~~~Ig~~~~ 157 (194)
T 3bfp_A 78 IHKSALISPSAIVEENAGILIMPYVVINAKAKIEKGVILNTSSVIEHECVIGEFSHVSVGAKCAGNVKIGKNCFLGINSC 157 (194)
T ss_dssp ECTTCEECTTCEECTTSCCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCE
T ss_pred cCCeEEECCCceeCCCCCcEEcCCCEECCCCEECCCCEECCCCEEcCCCEECCCCEECCCCEECCCcEECCCCEEcCCCE
Confidence 34455555555555 555555555555555555555553 24444444444444444 3 44444444444443
Q ss_pred E-eCeEECCCCEECCCcEE
Q 013012 412 I-QGSVICSNAQLQERVAL 429 (451)
Q Consensus 412 i-~~~ii~~~~~i~~~~~i 429 (451)
| .++.||++++|++++++
T Consensus 158 i~~~~~Ig~~~~Igagsvv 176 (194)
T 3bfp_A 158 VLPNLSLADDSILGGGATL 176 (194)
T ss_dssp ECTTCEECTTCEECTTCEE
T ss_pred ECCCCEECCCCEECCCCEE
Confidence 3 23444444444444444
No 111
>3gos_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransfera acyltransferase; 1.80A {Yersinia pestis} SCOP: b.81.1.2 PDB: 1kgq_A* 1kgt_A* 2tdt_A* 3tdt_A* 3bxy_A 1tdt_A
Probab=99.34 E-value=7.1e-12 Score=116.83 Aligned_cols=49 Identities=20% Similarity=0.357 Sum_probs=21.3
Q ss_pred eeCCCCeeCCCcEECCCCEECCCCEECCCCEEe-ceEECCCCEECCCcEEe
Q 013012 347 IIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVK-RSVIGRHCRIGSNVKVV 396 (451)
Q Consensus 347 ~i~~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~-~svig~~~~ig~~~~i~ 396 (451)
.+++++.|++++.|+++ +++.++.||++|.|. +++|+++|.||++|.|+
T Consensus 112 ~I~~~~~Ig~g~~I~~~-~i~~~~~IG~~~~I~~~~~Ig~~~~IG~~v~I~ 161 (276)
T 3gos_A 112 TVRKGAFIARNTVLMPS-YVNIGAFVDEGTMVDTWATVGSCAQIGKNVHLS 161 (276)
T ss_dssp EEBTTCEECTTCEECSE-EECTTCEECTTCEECTTEEECTTCEECTTCEEC
T ss_pred EECCCCEECCCCEEcCC-EEcCCeEECCCCEECCCCEECCCCEECCCCEEC
Confidence 33333344444433333 344444444444444 34444444444444444
No 112
>3jqy_B NEUO, polysialic acid O-acetyltransferase; LEFT-handed beta-helix polysia; HET: PEG; 1.70A {Escherichia coli}
Probab=99.34 E-value=3.5e-12 Score=117.80 Aligned_cols=50 Identities=22% Similarity=0.480 Sum_probs=23.0
Q ss_pred eCCCCeeCCCcEE--CCCCEECCCCEECCCCEEe----ceEECCCCEECCCcEEec
Q 013012 348 IHPSAELGSKTTV--GPHCMLGEGSQMGDKCSVK----RSVIGRHCRIGSNVKVVN 397 (451)
Q Consensus 348 i~~~~~i~~~~~i--~~~~~i~~~~~i~~~~~i~----~svig~~~~ig~~~~i~~ 397 (451)
|++++.|.+++.+ +.++.||++|.|+++|.|. +++||++|.||++|.|.+
T Consensus 88 Ig~~~~I~~~~~i~~g~~v~IG~~~~Ig~~~~I~~~~~~~~IG~~~~Ig~~~~I~~ 143 (252)
T 3jqy_B 88 IHKNSKIKGDIVATKGSKVIIGRRTTIGAGFEVVTDKCNVTIGHDCMIARDVILRA 143 (252)
T ss_dssp ECTTCEEEEEEEEESSCEEEECTTCEECTTCEEECSSSEEEECTTCEECSSEEEEC
T ss_pred ECCCCEECCceEEccCCEEEECCCCEECCCcEEEeCCCCeEECCCCEEcCCcEEec
Confidence 4444444444443 2234444455555544444 445555555555555443
No 113
>3tk8_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid; 1.80A {Burkholderia pseudomallei}
Probab=99.34 E-value=4.7e-12 Score=119.64 Aligned_cols=94 Identities=11% Similarity=0.070 Sum_probs=51.2
Q ss_pred CCCeeCCCcEECCCCEECCCCEECCCCEEe-ceEECCCCEECCCcEEe-ceEECCCCEECCCcEEeC---------eEEC
Q 013012 350 PSAELGSKTTVGPHCMLGEGSQMGDKCSVK-RSVIGRHCRIGSNVKVV-NSVVMNHVTIGDGCSIQG---------SVIC 418 (451)
Q Consensus 350 ~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~-~svig~~~~ig~~~~i~-~s~i~~~~~Ig~~~~i~~---------~ii~ 418 (451)
.++.|.+++.|++++.||++|.|+++ .|. ++.||++|.|+.++.|+ ++.|+++|.|+.++.|.+ ++||
T Consensus 144 ~~~~I~p~a~I~~~~~IG~g~~I~~~-~I~~g~~IG~~~~I~~~~~Ig~~~~IG~~v~I~~~~~I~~~~~~~~~~~v~IG 222 (316)
T 3tk8_A 144 GGFRVVPPAIARRGSFIAKNVVLMPS-YTNIGAYVDEGTMVDTWATVGSCAQIGKNVHLSGGVGIGGVLEPLQANPVIIE 222 (316)
T ss_dssp HCCEECTTCEEBTTCEECTTCEECSE-EECTTCEECTTCEECTTEEECTTCEECTTCEECTTCEECCCCSSTTSCCCEEC
T ss_pred CCcEEeCCeEEeCCcEEcCCCEECCC-EEeCCCEECCCCEEccceEECCCCEECCCCEEcCCCEECCCcccccCCCcEEC
Confidence 34444444444444444445544443 222 34566666666666664 466666666666666644 5666
Q ss_pred CCCEECCCcEEc-ceEECCCCEECCCC
Q 013012 419 SNAQLQERVALK-DCQVLSLSTSVFLS 444 (451)
Q Consensus 419 ~~~~i~~~~~i~-~~~ig~~~~i~~~~ 444 (451)
++|.||.++.|. +++||+|++|++++
T Consensus 223 d~v~IG~~a~I~~gv~IG~g~vIgags 249 (316)
T 3tk8_A 223 DNCFIGARSEVVEGVIVEENSVISMGV 249 (316)
T ss_dssp TTCEECTTCEECTTCEECTTCEECTTC
T ss_pred CCCEECCCCEEcCCCEECCCCEEcCCC
Confidence 666666666655 35555555555555
No 114
>1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A*
Probab=99.34 E-value=3.1e-12 Score=129.28 Aligned_cols=98 Identities=16% Similarity=0.146 Sum_probs=59.3
Q ss_pred CceeCCCCeeCCCcEECCCCEECCCCEECCCCEEeceEECCCCEECCCcEEe-ceEECCCCEECCCcEE-----------
Q 013012 345 NNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVKRSVIGRHCRIGSNVKVV-NSVVMNHVTIGDGCSI----------- 412 (451)
Q Consensus 345 ~~~i~~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~~svig~~~~ig~~~~i~-~s~i~~~~~Ig~~~~i----------- 412 (451)
++.|++++.|++++.|+ ++.||++|.|+ ++.|.+++||++|.||++|+|. +++|++++.||+++.|
T Consensus 292 ~~~ig~~~~I~~~~~i~-~~~ig~~~~i~-~~~i~~~~Ig~~~~Ig~~~~i~~~~~ig~~~~Ig~~~~i~~~~Ig~~~~i 369 (468)
T 1hm9_A 292 QTKIGAETVLTNGTYVV-DSTIGAGAVIT-NSMIEESSVADGVTVGPYAHIRPNSSLGAQVHIGNFVEVKGSSIGENTKA 369 (468)
T ss_dssp SCEECTTCEECTTCEEE-SCEECTTCEEC-SCEEESCEECTTCEECSSCEECSSCEECTTCEEEEEEEEESCEECTTCEE
T ss_pred CCEECCCCEECCCCEEe-ccEEeCCcEEE-EEEEeccccCCCcEECCceEEecCcEECCccEECCCcEEeeeEEcCCcEe
Confidence 33344444444444442 44455666666 6666667777777777777776 6777766666655444
Q ss_pred ------eCeEECCCCEECCCcEEc--------ceEECCCCEECCCC
Q 013012 413 ------QGSVICSNAQLQERVALK--------DCQVLSLSTSVFLS 444 (451)
Q Consensus 413 ------~~~ii~~~~~i~~~~~i~--------~~~ig~~~~i~~~~ 444 (451)
+++.||+++.||+++.+. .++||+++.|++++
T Consensus 370 ~~~~~i~~~~Ig~~~~Ig~~~~i~~~~~~~~~~~~Ig~~~~Ig~~~ 415 (468)
T 1hm9_A 370 GHLTYIGNCEVGSNVNFGAGTITVNYDGKNKYKTVIGDNVFVGSNS 415 (468)
T ss_dssp EEEEEEESEEECTTCEECTTCEEECBCSSCBCCEEECTTCEECTTC
T ss_pred CCceEEccccccCCcEECCCcEEecCcCccCCCcEECCCeEECCCC
Confidence 345677777777776653 26666666666655
No 115
>3eg4_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid, beta helix, acyltransferase, amino-acid biosynthesis, cytoplasm; 1.87A {Brucella suis}
Probab=99.33 E-value=5e-12 Score=119.10 Aligned_cols=63 Identities=19% Similarity=0.228 Sum_probs=27.1
Q ss_pred EECCCCEECCCcEEec-eEECCCCEECCCcEEeC---------eEECCCCEECCCcEEc-ceEECCCCEECCCC
Q 013012 382 VIGRHCRIGSNVKVVN-SVVMNHVTIGDGCSIQG---------SVICSNAQLQERVALK-DCQVLSLSTSVFLS 444 (451)
Q Consensus 382 vig~~~~ig~~~~i~~-s~i~~~~~Ig~~~~i~~---------~ii~~~~~i~~~~~i~-~~~ig~~~~i~~~~ 444 (451)
.||++|.|+.++.|++ +.|+++|.|+.++.|.+ ++||++|.||+++.|. +++||++++|++++
T Consensus 160 ~IG~~~~I~~~~~Ig~~~~IG~~v~I~~~~~i~~~~~~~~~~~v~IGd~v~IG~~a~I~~gv~IG~~avIgags 233 (304)
T 3eg4_A 160 YVDKGAMIDTWATVGSCAQIGKNVHLSGGVGIGGVLEPMQAGPTIIEDNCFIGARSEVVEGCIVREGSVLGMGV 233 (304)
T ss_dssp EECTTCEECTTEEECTTCEECTTCEECTTCEECCCCSSTTCCCCEECTTCEECTTCEECTTCEECTTCEECTTC
T ss_pred EECCCcEEcCCcEECCCCccCCCcEECCCCEECCccccCccCCeEEcCCCEECCCCEEcCCcEECCCcEECCCC
Confidence 3444444444444432 44444444444444433 4444444444444433 24444444444443
No 116
>3fsy_A Tetrahydrodipicolinate N-succinyltransferase; beta helix, L beta H domain, acyltransferase; HET: SCA; 1.97A {Mycobacterium tuberculosis} PDB: 3fsx_A*
Probab=99.33 E-value=2.5e-12 Score=118.50 Aligned_cols=100 Identities=12% Similarity=0.172 Sum_probs=67.0
Q ss_pred CCCceeCCCCeeCCCcEECCCCEECCCCEECCCCEEe-----ceEECCCCEECCCcEEec---------eEECCCCEECC
Q 013012 343 AQNNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVK-----RSVIGRHCRIGSNVKVVN---------SVVMNHVTIGD 408 (451)
Q Consensus 343 ~~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~-----~svig~~~~ig~~~~i~~---------s~i~~~~~Ig~ 408 (451)
++.++|.+++.|++++.|+++++|..++.++.+|.|. .++||++|.|++++.|.. ++|+++|.||.
T Consensus 165 ~P~AvI~~gA~IGeGv~Igp~~fVniga~Ig~g~~In~~i~iGv~IGd~v~IgpGa~IgG~~~~~~~~~V~IGDnv~IGa 244 (332)
T 3fsy_A 165 ADADRVRLGAHLAPGTTVMHEGFVNYNAGTLGASMVEGRISAGVVVGDGSDVGGGASIMGTLSGGGTHVISIGKRCLLGA 244 (332)
T ss_dssp SCGGGBBTTEEECTTCEECTTCEECTTEEESSCCEECSEECTTCEECTTCEECTTCEECSBCC---CCBCEECTTCEECT
T ss_pred CCcCEECCCCEECCCCEEccccEEEECCeECcCCEECCceecceEECCCCEECCCCEEcCCCCCCCccceEECCCCEECC
Confidence 3444455555555555555555555555555566553 257888888888888864 78888888888
Q ss_pred CcEEeCeEECCCCEECCCcEEc-c--eEECCCCEECCC
Q 013012 409 GCSIQGSVICSNAQLQERVALK-D--CQVLSLSTSVFL 443 (451)
Q Consensus 409 ~~~i~~~ii~~~~~i~~~~~i~-~--~~ig~~~~i~~~ 443 (451)
++.| ++.||++|+|++|++|. + .++.+|.++.++
T Consensus 245 nAtI-gVtIGd~~iIGAGSVVtkdt~I~~~~g~~v~a~ 281 (332)
T 3fsy_A 245 NSGL-GISLGDDCVVEAGLYVTAGTRVTMPDSNSVKAR 281 (332)
T ss_dssp TCEE-CSCBCSSCEECTTCEECTTCEEECTTSCEEEGG
T ss_pred CCEE-eeEECCCCEECCCCEECCCCEEEeCCCCEEEhH
Confidence 8888 88888888888888887 3 344456655543
No 117
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=99.32 E-value=1.9e-11 Score=110.53 Aligned_cols=87 Identities=11% Similarity=0.225 Sum_probs=45.3
Q ss_pred CceeCCCCeeCCCcEECCCCEECCCCEECCCCEEe-ceEECCCCEECCCcEEec-eEECCCCEECCCcEEe-CeEECCCC
Q 013012 345 NNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVK-RSVIGRHCRIGSNVKVVN-SVVMNHVTIGDGCSIQ-GSVICSNA 421 (451)
Q Consensus 345 ~~~i~~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~-~svig~~~~ig~~~~i~~-s~i~~~~~Ig~~~~i~-~~ii~~~~ 421 (451)
...+++++.|++++.|++++.||++|.|++++.|. +++||++|.|++++.|.+ ++|+++|.||.++.|. ++.||+++
T Consensus 111 ~v~IG~g~~I~~~~~i~~~~~IG~~~~I~~~~~I~~~~~Ig~~~~i~~~~~i~~~v~Ig~~~~Ig~~~~i~~~~~Ig~~~ 190 (220)
T 4ea9_A 111 SVRLGEGVAVMAGVAINADSWIGDLAIINTGAVVDHDCRLGAACHLGPASALAGGVSVGERAFLGVGARVIPGVTIGADT 190 (220)
T ss_dssp TCEECSSCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSSCEECTTCEECTTCEECTTCEECTTC
T ss_pred CCEECCCCEEcCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEEcCCCEECCCCEECCCCEEcCCcEECCCC
Confidence 33444444444444444444444444444444444 255555555555555543 5566666666665553 45566666
Q ss_pred EECCCcEEcc
Q 013012 422 QLQERVALKD 431 (451)
Q Consensus 422 ~i~~~~~i~~ 431 (451)
+|+++++|..
T Consensus 191 ~igagsvv~~ 200 (220)
T 4ea9_A 191 IVGAGGVVVR 200 (220)
T ss_dssp EECTTCEECS
T ss_pred EECCCCEEcc
Confidence 6666665553
No 118
>3fsy_A Tetrahydrodipicolinate N-succinyltransferase; beta helix, L beta H domain, acyltransferase; HET: SCA; 1.97A {Mycobacterium tuberculosis} PDB: 3fsx_A*
Probab=99.31 E-value=9.3e-12 Score=114.73 Aligned_cols=97 Identities=14% Similarity=0.114 Sum_probs=68.1
Q ss_pred eeCCCCeeCCCcEECCCCEECCCCEECCCCEEe-ceEECCCCEECCCcEEeceEECCCCEECCCcEEeC---------eE
Q 013012 347 IIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVK-RSVIGRHCRIGSNVKVVNSVVMNHVTIGDGCSIQG---------SV 416 (451)
Q Consensus 347 ~i~~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~-~svig~~~~ig~~~~i~~s~i~~~~~Ig~~~~i~~---------~i 416 (451)
.+++++.|++.++|.+++.||+++.|++++.|. ++.|+.+|.|...+.+ +++|+++|.|+.++.|.+ +.
T Consensus 157 vI~~gv~I~P~AvI~~gA~IGeGv~Igp~~fVniga~Ig~g~~In~~i~i-Gv~IGd~v~IgpGa~IgG~~~~~~~~~V~ 235 (332)
T 3fsy_A 157 VVPTGVRIADADRVRLGAHLAPGTTVMHEGFVNYNAGTLGASMVEGRISA-GVVVGDGSDVGGGASIMGTLSGGGTHVIS 235 (332)
T ss_dssp CCCTTCEESCGGGBBTTEEECTTCEECTTCEECTTEEESSCCEECSEECT-TCEECTTCEECTTCEECSBCC---CCBCE
T ss_pred ecCCCcEECCcCEECCCCEECCCCEEccccEEEECCeECcCCEECCceec-ceEECCCCEECCCCEEcCCCCCCCccceE
Confidence 344555555555555555666666666655554 3567777777655443 489999999999999875 89
Q ss_pred ECCCCEECCCcEEcceEECCCCEECCCCc
Q 013012 417 ICSNAQLQERVALKDCQVLSLSTSVFLSL 445 (451)
Q Consensus 417 i~~~~~i~~~~~i~~~~ig~~~~i~~~~~ 445 (451)
||++|.||+++.| ++.||++++|++|+.
T Consensus 236 IGDnv~IGanAtI-gVtIGd~~iIGAGSV 263 (332)
T 3fsy_A 236 IGKRCLLGANSGL-GISLGDDCVVEAGLY 263 (332)
T ss_dssp ECTTCEECTTCEE-CSCBCSSCEECTTCE
T ss_pred ECCCCEECCCCEE-eeEECCCCEECCCCE
Confidence 9999999999988 766677666666663
No 119
>2wlg_A Polysialic acid O-acetyltransferase; enzyme, LEFT-handed beta HEL; HET: SOP; 1.90A {Neisseria meningitidis serogroup Y} PDB: 2wld_A 2wle_A* 2wlf_A* 2wlc_A*
Probab=99.30 E-value=1.3e-11 Score=111.24 Aligned_cols=101 Identities=9% Similarity=0.072 Sum_probs=63.0
Q ss_pred CceeCCCCeeCCC-cEECC---CCEECCCCEECCCCEEec----eEECCCCEECCCcEE----eceEECCCCEECCCcEE
Q 013012 345 NNIIHPSAELGSK-TTVGP---HCMLGEGSQMGDKCSVKR----SVIGRHCRIGSNVKV----VNSVVMNHVTIGDGCSI 412 (451)
Q Consensus 345 ~~~i~~~~~i~~~-~~i~~---~~~i~~~~~i~~~~~i~~----svig~~~~ig~~~~i----~~s~i~~~~~Ig~~~~i 412 (451)
..++++++.|.+. +.+.+ ++.||++|.|++++.|.. ++||++|.|++.+.+ .+++|+++|.||++|.|
T Consensus 36 ~v~Ig~~~~I~~~~~~i~g~~~~v~IG~~~~I~~~~~i~~~~~~~~IG~~~~Ig~~~ii~~~~~~i~IG~~~~Ig~~~~I 115 (215)
T 2wlg_A 36 SVYIGNNCKIVSSNIRLKGNNITLFIADDVEIMGLVCSLHSDCSLQIQAKTTMGNGEITIAEKGKISIGKDCMLAHGYEI 115 (215)
T ss_dssp EEEECTTCEEESCEEEEESSSCEEEECTTCEEESEEEEECTTCEEEECTTCEECSEEEEECTTCEEEECTTCEECTTEEE
T ss_pred EEEECCCCEEeCceEEEEcCCCEEEECCCCEECCCeEEEcCCceEEEcCCCEECCEEEEEeCCCCEEECCCCEEcCCEEE
Confidence 3455555555554 34433 266666666666666652 677777777764444 45677777777777776
Q ss_pred eC--------------------eEECCCCEECCCcEEc-ceEECCCCEECCCCc
Q 013012 413 QG--------------------SVICSNAQLQERVALK-DCQVLSLSTSVFLSL 445 (451)
Q Consensus 413 ~~--------------------~ii~~~~~i~~~~~i~-~~~ig~~~~i~~~~~ 445 (451)
.+ ++||++++||.++.|. +++||++++|++++.
T Consensus 116 ~~~~~h~~~~~~~~~~~~~~~~v~Igd~v~IG~~~~I~~gv~Ig~~~vIgagsv 169 (215)
T 2wlg_A 116 RNTDMHPIYSLENGERINHGKDVIIGNHVWLGRNVTILKGVCIPNNVVVGSHTV 169 (215)
T ss_dssp ESCCSSCEEETTTCBBCCCCCCEEECTTCEECTTCEECTTCEECSSCEECTTCE
T ss_pred ECCCCcccccccccccccCCCCeEECCCcEECCCCEECCCCEECCCCEECCCCE
Confidence 54 3677777777777666 466777777766664
No 120
>2pig_A Putative transferase; SCR6, NESG, YDCK, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.38A {Salmonella paratyphi} PDB: 2f9c_A
Probab=99.29 E-value=1.4e-11 Score=117.24 Aligned_cols=105 Identities=12% Similarity=0.205 Sum_probs=74.3
Q ss_pred ccCCCceeCCCCeeCCCcEECCCCEECCCCEECCCCEEeceEECCCCE----------------------------ECCC
Q 013012 341 FSAQNNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVKRSVIGRHCR----------------------------IGSN 392 (451)
Q Consensus 341 ~~~~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~~svig~~~~----------------------------ig~~ 392 (451)
.+.+.+.|++++.|++++.|+ ++.|++++.|++++.|.+++|+.+|. |+++
T Consensus 79 ~I~g~~~Ig~~~~Ig~~~~I~-~~~Ig~~~~I~~~s~I~~s~I~~~~~I~~~~~i~~~s~I~~~~~~~~~~~~g~~I~~~ 157 (334)
T 2pig_A 79 RITQPCTLYNNVRIGDNVWID-RADISDGARISDNVTIQSSSVREECAIYGDARVLNQSEILAIQGLTHEHAQILQIYDR 157 (334)
T ss_dssp EEESSCEEESSCEECTTCEEE-SCEEESSCEECTTCEEESCEEESSEEECTTCEEESSCEEEC--------CCCEEECTT
T ss_pred EEeeeeeECCCcEECCCCEEE-eEEEcCCCEEeCCcEEeccEEcCCeEEecCCEEeCCEEEeecceeecccCCCeEECCC
Confidence 334455566666666666665 66677777777777776655444443 4555
Q ss_pred cEEeceEECCCCEECCCcEEeCeEECCCCEECCCcEEcceE-----ECCCCEECCCCcc
Q 013012 393 VKVVNSVVMNHVTIGDGCSIQGSVICSNAQLQERVALKDCQ-----VLSLSTSVFLSLS 446 (451)
Q Consensus 393 ~~i~~s~i~~~~~Ig~~~~i~~~ii~~~~~i~~~~~i~~~~-----ig~~~~i~~~~~~ 446 (451)
++|.+|+|+++|.|+.+|.|++++|++++.|++++.+.+.. |++++.+..+++.
T Consensus 158 a~I~~s~I~~g~~I~~~a~I~~svI~~~a~I~~~a~V~~~~~~~v~I~~~~~I~g~a~V 216 (334)
T 2pig_A 158 ATVNHSRIVHQVQLYGNATITHAFIEHRAEVFDFALIEGDKDNNVWICDCAKVYGHARV 216 (334)
T ss_dssp CEEESCEEETTCEECTTCEEESEEECTTCEECTTCEEECCSSCCEEECTTCEECTTCEE
T ss_pred CEEeccEEcCCCEEcCCeEEeCcEEcCCCEECCCcEECCceeccEEECCCcEEeeeEEE
Confidence 56667888888899999999999999999999999887543 7777777776654
No 121
>3r5d_A Tetrahydrodipicolinate N-succinyletransferase; 1.80A {Pseudomonas aeruginosa} PDB: 3r5b_A* 3r5c_A* 3r5a_A
Probab=99.28 E-value=7.9e-12 Score=116.08 Aligned_cols=96 Identities=14% Similarity=0.142 Sum_probs=62.9
Q ss_pred eCCCCeeCCCcEECCCCEECCCCEECCCCEEe-ceEECCCCEECCCcEEeceEECCCCEECCCcEEeC---------eEE
Q 013012 348 IHPSAELGSKTTVGPHCMLGEGSQMGDKCSVK-RSVIGRHCRIGSNVKVVNSVVMNHVTIGDGCSIQG---------SVI 417 (451)
Q Consensus 348 i~~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~-~svig~~~~ig~~~~i~~s~i~~~~~Ig~~~~i~~---------~ii 417 (451)
+++++.|++.+.|.+++.||+++.|++++.|. ++.||++|.|..++.++ ++|+++|.|+.++.|.+ ++|
T Consensus 181 I~~gv~I~P~AvI~~GA~IGeGv~Igp~a~Vn~na~IGdg~iI~~~a~ig-v~IGdnv~IgpGa~IgG~~~~~~~~~V~I 259 (347)
T 3r5d_A 181 VPAGVRIADTARVRLGAYIGEGTTVMHEGFVNFNAGTEGPGMIEGRVSAG-VFVGKGSDLGGGCSTMGTLSGGGNIVISV 259 (347)
T ss_dssp CCTTEEESSGGGBBTTEEECTTEEECTTCEECTTEEESSSEEECSEECTT-CEECTTEEECTTCEECC------CCCCEE
T ss_pred ccCCcEECCcCEECCCCEECCCCEECCCCEECCCCEECCCcEEcCCceEe-EEECCCCEECCCCEEccccCCCCccceEE
Confidence 34444444444444444455555555544444 35677777777766654 88888888888888865 788
Q ss_pred CCCCEECCCcEEcceEECCCCEECCCCc
Q 013012 418 CSNAQLQERVALKDCQVLSLSTSVFLSL 445 (451)
Q Consensus 418 ~~~~~i~~~~~i~~~~ig~~~~i~~~~~ 445 (451)
|++|.||.++.| ++.||++++|++|+.
T Consensus 260 Gdnv~IGAnAtI-GVtIGd~~iIGAGSV 286 (347)
T 3r5d_A 260 GEGCLIGANAGI-GIPLGDRNIVEAGLY 286 (347)
T ss_dssp CTTCEECTTCEE-CSCBCTTCEECTTCE
T ss_pred CCCCEECCCCEE-eeEECCCCEECCCCE
Confidence 888988888888 666666666666653
No 122
>2oeg_A UTP-glucose-1-phosphate uridylyltransferase 2, putative; rossmann-fold, beta-helix, pyrophosphorylase; HET: UPG; 2.30A {Leishmania major} PDB: 2oef_A*
Probab=99.27 E-value=1.5e-11 Score=122.57 Aligned_cols=134 Identities=14% Similarity=0.120 Sum_probs=94.8
Q ss_pred CceEEEEecCCCCCCCCCCCCCCcccccccC-CcchHHHHHHHHHHCCCc-----EEEEEecCchhhHHHHHhhh-h--h
Q 013012 2 DFQVVVLAGGTSKKLVPLVSKEVPKALLPVA-NRPVLSYVLEQLELSNIK-----DLIVVVEGADAALRVGGWIS-A--A 72 (451)
Q Consensus 2 ~~~avIlAgG~g~Rl~pl~~~~~pK~llpv~-gkpli~~~l~~l~~~gi~-----~iivv~~~~~~~~~i~~~~~-~--~ 72 (451)
++.+||||||.|||| ....||+|+||+ |+|+|++.++++.+.+.. .+++.+++. ..+.+++|+. + +
T Consensus 75 k~avViLAGGlGTRL----g~~~PK~llpV~~gk~fLe~~ie~l~~~~~~~g~~ip~viMtS~~-t~e~t~~~f~~~~~~ 149 (505)
T 2oeg_A 75 STVVLKLNGGLGTGM----GLCDAKTLLEVKDGKTFLDFTALQVQYLRQHCSEHLRFMLMDSFN-TSASTKSFLKARYPW 149 (505)
T ss_dssp TEEEEEEECCCCGGG----TCCSCGGGSEEETTEEHHHHHHHHHHHHHHHTCTTCEEEEEECHH-HHHHHHHHHHHHCHH
T ss_pred cceEEEEcCCccccc----CCCCCCcccccCCCCcHHHHHHHHHHHHHHhcCCCcCEEEEeCCC-CHHHHHHHHhhhhhc
Confidence 367999999999999 567999999999 999999999999877533 566666533 2456777776 3 2
Q ss_pred cc-CceeeEEE-----------------E------cCCCCChHHHHHHH-----HhcC---CCCcEEEEcCCccCC-CCc
Q 013012 73 YV-DRLHVEVA-----------------T------VPEDVGTAGALRAI-----AHHL---TAKDVLVVSGDLVSD-VPP 119 (451)
Q Consensus 73 ~~-~~~~~~i~-----------------~------~~~~~gt~~~l~~~-----~~~l---~~~~~lvl~~D~i~~-~~~ 119 (451)
+. .+-.+.+. . ...+.|+++.+... ++.+ ..++++|.++|.+.. .|+
T Consensus 150 fGl~~~~I~~f~Q~~~P~~~~~~~~~i~~~~~~~~e~~P~G~Gg~~~aL~~sGlL~~l~~~G~e~i~V~N~DNL~~~~D~ 229 (505)
T 2oeg_A 150 LYQVFDSEVELMQNQVPKILQDTLEPAAWAENPAYEWAPPGHGDIYTALYGSGKLQELVEQGYRYMFVSNGDNLGATIDK 229 (505)
T ss_dssp HHTTCCCCCEEECCCEECEETTTCCBCCCTTCGGGGEECCCTTHHHHHHHHTTHHHHHHHTTCCEEEEECTTCTTCCCCH
T ss_pred cCCCccceEEEEEcCEEeEecCCCceeecCCCCccccCcCCchHHHHHHHhcChHHHHHhcCCCEEEEEECCccccccCH
Confidence 21 10012211 0 11245999988744 2322 246899999997764 466
Q ss_pred hHHHHHHHhcCceEEEEEeeec
Q 013012 120 GAVTAAHRRHDAVVTAMICSVP 141 (451)
Q Consensus 120 ~~~l~~~~~~~~~~t~~~~~~~ 141 (451)
.++.+|.++++++++.+.+..
T Consensus 230 -~llg~~~~~~ad~~~~v~~k~ 250 (505)
T 2oeg_A 230 -RVLAYMEKEKIDFLMEVCRRT 250 (505)
T ss_dssp -HHHHHHHHHTCSEEEEEEECC
T ss_pred -HHHHHHHhcCCcEEEEEEEec
Confidence 899999999999999887653
No 123
>3jqy_B NEUO, polysialic acid O-acetyltransferase; LEFT-handed beta-helix polysia; HET: PEG; 1.70A {Escherichia coli}
Probab=99.22 E-value=3.7e-11 Score=110.89 Aligned_cols=104 Identities=21% Similarity=0.248 Sum_probs=84.2
Q ss_pred CceeCCCCeeCCCcEE----CCCCEECCCCEECCCCEEe---ceEECCCCEECCCcEEe----ceEECCCCEECCCcEEe
Q 013012 345 NNIIHPSAELGSKTTV----GPHCMLGEGSQMGDKCSVK---RSVIGRHCRIGSNVKVV----NSVVMNHVTIGDGCSIQ 413 (451)
Q Consensus 345 ~~~i~~~~~i~~~~~i----~~~~~i~~~~~i~~~~~i~---~svig~~~~ig~~~~i~----~s~i~~~~~Ig~~~~i~ 413 (451)
.+.+++++.+...+.+ ..++.||++|.|++++.|. +++||++|.|++++.|. +++|+++|.||++|.|.
T Consensus 63 ~v~I~~~~~i~~~~~i~~g~~~~v~Ig~~~~I~~~~~i~~g~~v~IG~~~~Ig~~~~I~~~~~~~~IG~~~~Ig~~~~I~ 142 (252)
T 3jqy_B 63 KLIIEDDVECRWLTVIFRGDNNYVRIHKNSKIKGDIVATKGSKVIIGRRTTIGAGFEVVTDKCNVTIGHDCMIARDVILR 142 (252)
T ss_dssp EEEECTTCEEEEEEEEEESSSCEEEECTTCEEEEEEEEESSCEEEECTTCEECTTCEEECSSSEEEECTTCEECSSEEEE
T ss_pred EEEEcCCcEEecceEEEeCCCCeEEECCCCEECCceEEccCCEEEECCCCEECCCcEEEeCCCCeEECCCCEEcCCcEEe
Confidence 4556666665554444 4456677777777777774 58999999999999998 89999999999999997
Q ss_pred Ce--------------------EECCCCEECCCcEEc-ceEECCCCEECCCCccCC
Q 013012 414 GS--------------------VICSNAQLQERVALK-DCQVLSLSTSVFLSLSSN 448 (451)
Q Consensus 414 ~~--------------------ii~~~~~i~~~~~i~-~~~ig~~~~i~~~~~~~~ 448 (451)
++ +||++|.||+++.|. +++||++++|++++....
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~v~Igd~v~IG~~a~I~~gv~IG~~~~IgagsvV~~ 198 (252)
T 3jqy_B 143 ASDGHPIFDIHSKKRINWAKDIIISSYVWVGRNVSIMKGVSVGSGSVIGYGSIVTK 198 (252)
T ss_dssp CSCSSCEEETTTCBBCCCCCCEEECSSCEECSSEEECTTCEECTTCEECTTCEECS
T ss_pred cCCCcccccccccccccccCCeEEecCcEECCCCEECCCCEECCCCEECCCCEECc
Confidence 64 999999999999887 699999999999886543
No 124
>3q1x_A Serine acetyltransferase; cysteine biosynthesis, LEFT handed helix, OASS; 1.59A {Entamoeba histolytica} PDB: 3p47_A 3p1b_A
Probab=99.22 E-value=2.7e-11 Score=113.84 Aligned_cols=87 Identities=20% Similarity=0.336 Sum_probs=65.6
Q ss_pred CceeCCCCeeCCCcEE--CCCCEECCCCEECCCCEEec-eEECCCCEECCCcEEe-----ceEECCCCEECCCcEE-eCe
Q 013012 345 NNIIHPSAELGSKTTV--GPHCMLGEGSQMGDKCSVKR-SVIGRHCRIGSNVKVV-----NSVVMNHVTIGDGCSI-QGS 415 (451)
Q Consensus 345 ~~~i~~~~~i~~~~~i--~~~~~i~~~~~i~~~~~i~~-svig~~~~ig~~~~i~-----~s~i~~~~~Ig~~~~i-~~~ 415 (451)
+..|++++.|++++.| +.+++||++|.||++|.|.+ ++||.++.+++++.+. +++|+++|.||.+|.| +++
T Consensus 163 gv~I~p~a~IG~~v~I~~g~gvvIG~~~~IG~~v~I~~~vtIG~~~~ig~~~~i~~~~~~~~~IGd~v~IGaga~Ilggv 242 (313)
T 3q1x_A 163 SIDIHPGASIKGHFFIDHGVGVVIGETAIIGEWCRIYQSVTLGAMHFQEEGGVIKRGTKRHPTVGDYVTIGTGAKVLGNI 242 (313)
T ss_dssp CCEECTTCEECSSCEESSCTTCEECTTCEECSSCEECTTCEEECCCCCCTTCCCCCCSSCSCEECSSCEECTTCEEESSC
T ss_pred CeEECCCCEECCCEEECCCCceEECCCcEECCCCEECCCcEEeCCcEECCCceEcCCCccCCEECCCCEECCCCEECCCc
Confidence 4567777777777777 55677777777777776653 6666666666666664 4599999999999987 579
Q ss_pred EECCCCEECCCcEEcc
Q 013012 416 VICSNAQLQERVALKD 431 (451)
Q Consensus 416 ii~~~~~i~~~~~i~~ 431 (451)
.||++++||++++|..
T Consensus 243 ~IG~~a~IGagsvV~~ 258 (313)
T 3q1x_A 243 IVGSHVRIGANCWIDR 258 (313)
T ss_dssp EECSSEEECTTCEECS
T ss_pred EECCCCEECCCCEECC
Confidence 9999999999999874
No 125
>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A*
Probab=99.22 E-value=4.3e-11 Score=120.51 Aligned_cols=34 Identities=12% Similarity=-0.007 Sum_probs=25.3
Q ss_pred CeEECCCCEECCCcEEc-ceEECCCCEECCCCccC
Q 013012 414 GSVICSNAQLQERVALK-DCQVLSLSTSVFLSLSS 447 (451)
Q Consensus 414 ~~ii~~~~~i~~~~~i~-~~~ig~~~~i~~~~~~~ 447 (451)
+++||++++||.++.|. ++.||+|++|++++...
T Consensus 397 ~v~Ig~~~~IG~~~~I~~gv~Ig~~~~igagsvV~ 431 (459)
T 4fce_A 397 KTIIGDDVFVGSDTQLVAPVTVANGATIGAGTTVT 431 (459)
T ss_dssp CEEECTTCEECTTCEEESSEEECTTCEECTTCEEC
T ss_pred CCEECCCeEEcCCCEEcCCcEECCCCEECCCCEEc
Confidence 36777788888888776 58888888888877443
No 126
>3brk_X Glucose-1-phosphate adenylyltransferase; ADP-glucose pyrophosphorylase, allostery, kinetics, structure-function relationships; 2.10A {Agrobacterium tumefaciens}
Probab=99.19 E-value=5.3e-11 Score=118.43 Aligned_cols=86 Identities=12% Similarity=0.126 Sum_probs=75.4
Q ss_pred CCCEECCCCEECC-----CCEEeceEECCCCEECCCcEEeceEECCCCEECCCcEEeCeEECCCCEECCCcEEcceEECC
Q 013012 362 PHCMLGEGSQMGD-----KCSVKRSVIGRHCRIGSNVKVVNSVVMNHVTIGDGCSIQGSVICSNAQLQERVALKDCQVLS 436 (451)
Q Consensus 362 ~~~~i~~~~~i~~-----~~~i~~svig~~~~ig~~~~i~~s~i~~~~~Ig~~~~i~~~ii~~~~~i~~~~~i~~~~ig~ 436 (451)
..+.+.+.+.|++ ++.++++.||++|.| +++.|.+|+|+++|+||++|.|.+|+|++++.|++++.|.+|+||+
T Consensus 301 ~~~~i~~~~~i~~~~~~~~~~i~~~~ig~~~~I-~~~~i~~~~ig~~~~I~~~~~i~~~~i~~~~~i~~~~~i~~~~ig~ 379 (420)
T 3brk_X 301 TYAEITPPAKFVHDDEDRRGSAVSSVVSGDCII-SGAALNRSLLFTGVRANSYSRLENAVVLPSVKIGRHAQLSNVVIDH 379 (420)
T ss_dssp CCCCCCCCCEEECBCSSCBCEEESCEECSSCEE-ESCEEESCEECTTCEECTTCEEEEEEECTTCEECTTCEEEEEEECT
T ss_pred eccccCCCcEEecccccCCcEecCCEECCCCEE-cCCEEeCcEEcCCCEECCCCEEcceEEcCCCEECCCCEEeceEECC
Confidence 3444445555554 888889999999999 9999999999999999999999999999999999999999999999
Q ss_pred CCEECCCCccCC
Q 013012 437 LSTSVFLSLSSN 448 (451)
Q Consensus 437 ~~~i~~~~~~~~ 448 (451)
+++|++++...+
T Consensus 380 ~~~i~~~~~i~~ 391 (420)
T 3brk_X 380 GVVIPEGLIVGE 391 (420)
T ss_dssp TCEECTTCEESS
T ss_pred CCEECCCCEEeC
Confidence 999999986554
No 127
>3nz2_A Hexapeptide-repeat containing-acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: ACO; 2.35A {Vibrio cholerae o1 biovar eltor} SCOP: b.81.1.0 PDB: 3ect_A*
Probab=99.18 E-value=5.2e-11 Score=105.35 Aligned_cols=85 Identities=24% Similarity=0.412 Sum_probs=49.6
Q ss_pred CCceeCCC--CeeCCCcEECCCCEECCCCEECCCCEEeceEECCCCEECCCcEEec-------------------eEECC
Q 013012 344 QNNIIHPS--AELGSKTTVGPHCMLGEGSQMGDKCSVKRSVIGRHCRIGSNVKVVN-------------------SVVMN 402 (451)
Q Consensus 344 ~~~~i~~~--~~i~~~~~i~~~~~i~~~~~i~~~~~i~~svig~~~~ig~~~~i~~-------------------s~i~~ 402 (451)
.+++|+++ +.++.++.||++++|+.+|.|.+++ ..+||++|.||++|.|.. ++|++
T Consensus 61 ~~~~I~~p~~~~ig~~v~IG~~~~I~~~~~i~~~~---~i~IG~~~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~v~IG~ 137 (195)
T 3nz2_A 61 HKSCVQPPFHCEFGKTIRIGDHTFINMNVVMLDGA---PITIGDHVLIGPSTQFYTASHSLDYRRRQAWETICKPIVIED 137 (195)
T ss_dssp TTCEECSSEEESCSTTEEECTTCEECTTEEEECSS---CEEECTTCEECTTCEEECEECCSSGGGTTTCCCEECCEEECT
T ss_pred CCcEEcCCeEEEeCCCeEECCCcEECcCCEEecCc---eEEECCCCEECCCCEEecCCCCcccccccccceecCCeEECC
Confidence 34445542 3334444444444444444443332 248999999999988863 36666
Q ss_pred CCEECCCcEE-eCeEECCCCEECCCcEEcc
Q 013012 403 HVTIGDGCSI-QGSVICSNAQLQERVALKD 431 (451)
Q Consensus 403 ~~~Ig~~~~i-~~~ii~~~~~i~~~~~i~~ 431 (451)
+|.||.+|.| .++.||++++|+++++|..
T Consensus 138 ~v~IG~~~~I~~gv~IG~~~vIgagsvV~~ 167 (195)
T 3nz2_A 138 DVWIGGNVVINQGVTIGARSVVAANSVVNQ 167 (195)
T ss_dssp TCEECTTCEECTTCEECTTCEECTTCEECS
T ss_pred CCEEcCCCEECCCCEECCCCEECCCCEEcc
Confidence 6666666666 3566666666666666654
No 128
>2yqc_A UDP-N-acetylglucosamine pyrophosphorylase; uridine-diphospho-N- acetylglucosamine, N-acetylglucosamine-1-phosphate, transferase; 1.90A {Candida albicans} PDB: 2yqh_A* 2yqj_A* 2yqs_A*
Probab=99.18 E-value=5.7e-10 Score=111.48 Aligned_cols=192 Identities=11% Similarity=0.146 Sum_probs=119.7
Q ss_pred CceEEEEecCCCCCCCCCCCCCCcccccccC---CcchHHHHHHHHHHC--------C------CcEEEEEecCchhhHH
Q 013012 2 DFQVVVLAGGTSKKLVPLVSKEVPKALLPVA---NRPVLSYVLEQLELS--------N------IKDLIVVVEGADAALR 64 (451)
Q Consensus 2 ~~~avIlAgG~g~Rl~pl~~~~~pK~llpv~---gkpli~~~l~~l~~~--------g------i~~iivv~~~~~~~~~ 64 (451)
++.+||||||.|||| +...||+|+||+ |+|++++.++++.+. | +..+++...+. .+.
T Consensus 103 kvavvlLaGG~GTRL----g~~~PK~l~~v~l~~gk~~l~~~~e~l~~~~~~~~~~~G~~~~~~ip~~ImtS~~t--~~~ 176 (486)
T 2yqc_A 103 EVAVLLMAGGQGTRL----GSSAPKGCFNIELPSQKSLFQIQAEKILKIEQLAQQYLKSTKKPIINWYIMTSGPT--RNA 176 (486)
T ss_dssp CEEEEEEEESBCGGG----TCSSBGGGCBCCCTTCCBHHHHHHHHHHHHHHHHHHHHTCSSCCCCEEEEEECGGG--HHH
T ss_pred CeEEEEEcCCccccC----CCCCCCccceecCCCCCcHHHHHHHHHHHHHHHhhhhcCCCcCCccCEEEEECCCC--HHH
Confidence 478999999999999 778999999999 999999999999875 5 66565555543 446
Q ss_pred HHHhhhhh--cc-CceeeEEEEcC----------------------CCCChHHHHHHHHh-----cC---CCCcEEEEcC
Q 013012 65 VGGWISAA--YV-DRLHVEVATVP----------------------EDVGTAGALRAIAH-----HL---TAKDVLVVSG 111 (451)
Q Consensus 65 i~~~~~~~--~~-~~~~~~i~~~~----------------------~~~gt~~~l~~~~~-----~l---~~~~~lvl~~ 111 (451)
+.+|+.+. +. ..-.+.+..|. .+.|+++.++.... .+ .-+++.+.+.
T Consensus 177 t~~~~~~~~~fgl~~~~v~~f~Q~~~P~i~~dg~~i~l~~~~~i~~~P~G~Ggi~~aL~~sG~Ld~l~~~G~~yi~v~~v 256 (486)
T 2yqc_A 177 TESFFIENNYFGLNSHQVIFFNQGTLPCFNLQGNKILLELKNSICQSPDGNGGLYKALKDNGILDDLNSKGIKHIHMYCV 256 (486)
T ss_dssp HHHHHHHTGGGGSCGGGEEEEECCEEECBCTTSSSBCEEETTEECEEECCGGGHHHHHHHTTHHHHHHHHTCCEEEEEET
T ss_pred HHHHHhhccccCCCcceEEEEecccceeEcCCCCccccCCCCccccCcCCchHHHHHHHHcCcHHHHHhcCCeEEEEECC
Confidence 77777652 21 11122211111 24688877654422 11 2356788888
Q ss_pred C-ccC-CCCchHHHHHHHhcCceEEEEEeeeccCCCccCCCCCCcccCCCCCcccEEEecC-CCc-eEEEeecccccccc
Q 013012 112 D-LVS-DVPPGAVTAAHRRHDAVVTAMICSVPVSGLSEAGSSGAKDKTKKPGRYNIIGMDP-TKQ-FLLHIATGAELEKD 187 (451)
Q Consensus 112 D-~i~-~~~~~~~l~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~-~~~-~l~~~~~~~~~ek~ 187 (451)
| ++. ..| ..++.+|.++++++++.+.+.. .+ ....|++.... +++ .+..+.+ ++
T Consensus 257 DN~l~~~~D-p~~lg~~~~~~~~~~~~vv~k~--~~--------------~e~~Gvl~~~~~dg~~~vvEy~E-----~~ 314 (486)
T 2yqc_A 257 DNCLVKVAD-PIFIGFAIAKKFDLATKVVRKR--DA--------------NESVGLIVLDQDNQKPCVIEYSE-----IS 314 (486)
T ss_dssp TBTTCCTTC-HHHHHHHHHHTCSEEEEEEECC--ST--------------TCCCCEEEEETTTTEEEEECGGG-----SC
T ss_pred CCceeeccC-HHHHHHHHHcCCCEEEEEEEcC--CC--------------CCceeEEEEEecCCCEEEEEEec-----CC
Confidence 8 333 334 4688899999999888776542 11 23457766542 343 2333332 22
Q ss_pred ccccHHHHhh-cCe--eEEecCCccceEEeechHHHHHHHh
Q 013012 188 TRIRKSILRA-VGQ--MDIRADLMDAHMYAFNRSVLQEVLD 225 (451)
Q Consensus 188 ~~i~~~~~~~-~~~--~~~~s~l~~~giYi~~~~~l~~~~~ 225 (451)
. ..... .+. -....+..|+++|+|+.++|...++
T Consensus 315 ~----~~~~~~~~~~~~~~~~~~~Ni~~~~~~l~~L~~~l~ 351 (486)
T 2yqc_A 315 Q----ELANKKDPQDSSKLFLRAANIVNHYYSVEFLNKMIP 351 (486)
T ss_dssp H----HHHHCEETTEEEEESSCEEEEEEEEEEHHHHHHHHH
T ss_pred H----HHhhcccccccccccccceeEEEEEEeHHHHHHHHH
Confidence 1 11110 111 1234568899999999999987444
No 129
>3hjj_A Maltose O-acetyltransferase; LEFT-handed beta-helix, acyltransferase, struct genomics; 2.15A {Bacillus anthracis} SCOP: b.81.1.0 PDB: 3igj_A*
Probab=99.17 E-value=2.5e-10 Score=100.59 Aligned_cols=91 Identities=22% Similarity=0.316 Sum_probs=57.1
Q ss_pred CceeCCCCeeCCCcEECCCCEECCCCEECCCCEEe---ceEECCCCEECCCcEEec-------------------eEECC
Q 013012 345 NNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVK---RSVIGRHCRIGSNVKVVN-------------------SVVMN 402 (451)
Q Consensus 345 ~~~i~~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~---~svig~~~~ig~~~~i~~-------------------s~i~~ 402 (451)
+++|++++.+. ++.++.||+++.|+++|.|. ..+||++|.||++|.|.+ ++|++
T Consensus 64 ~~~I~~~~~~~----~g~~v~IG~~~~I~~~~~i~~~~~v~IG~~~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~v~IG~ 139 (190)
T 3hjj_A 64 KAQINPDFRCD----YGYNIHVGKSFFANFNCVILDVCEVRIGDHCMFAPGVHIYTATHPLHPVERNSGKEYGKPVKIGN 139 (190)
T ss_dssp CCEECSSCEES----SSTTEEECTTCEECTTCEEECSSCEEECTTCEECTTCEEECEECCSSHHHHTSSEEEECCEEECT
T ss_pred CcEECCCEEEE----eCCceEECCceeeCCCeEEEeCCCeEECCceEEcCCcEEecCCccCchhhccccccccCCeEECC
Confidence 45555554440 13444555555555555554 458999999999999943 46777
Q ss_pred CCEECCCcEEe-CeEECCCCEECCCcEEcceEECCCCEE
Q 013012 403 HVTIGDGCSIQ-GSVICSNAQLQERVALKDCQVLSLSTS 440 (451)
Q Consensus 403 ~~~Ig~~~~i~-~~ii~~~~~i~~~~~i~~~~ig~~~~i 440 (451)
+|.||.+|.|. ++.||++++|+++++|... |.+++++
T Consensus 140 ~v~IG~~~~I~~gv~IG~~~vIgagsvV~~d-vp~~~v~ 177 (190)
T 3hjj_A 140 NVWVGGGAIINPGVSIGDNAVIASGAVVTKD-VPNNVVV 177 (190)
T ss_dssp TCEECTTCEECTTCEECTTCEECTTCEECSC-BCTTEEE
T ss_pred CCEECCCCEECCCCEECCCCEECCCCEECcc-cCCCCEE
Confidence 77777777774 6777777777777777643 3444444
No 130
>3oc9_A UDP-N-acetylglucosamine pyrophosphorylase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.80A {Entamoeba histolytica}
Probab=99.17 E-value=8.7e-10 Score=106.53 Aligned_cols=191 Identities=9% Similarity=0.129 Sum_probs=121.5
Q ss_pred CceEEEEecCCCCCCCCCCCCCCccccccc---CCcchHHHHHHHHHH-------------CCCcEEEEEecCchhhHHH
Q 013012 2 DFQVVVLAGGTSKKLVPLVSKEVPKALLPV---ANRPVLSYVLEQLEL-------------SNIKDLIVVVEGADAALRV 65 (451)
Q Consensus 2 ~~~avIlAgG~g~Rl~pl~~~~~pK~llpv---~gkpli~~~l~~l~~-------------~gi~~iivv~~~~~~~~~i 65 (451)
++.+|+||||.|||| +...||+|+|| .|||++++.++.+.+ .++. .+|.++... .+.+
T Consensus 35 kvavvlLAGG~GTRL----G~~~PK~~~~Vgl~~gks~lq~~~e~i~~lq~l~~~~~~~~~~~Ip-~~IMtS~~t-~e~t 108 (405)
T 3oc9_A 35 KTALITPAGGQGSRL----GFEHPKGMFVLPFEIPKSIFQMTSERLLRLQELASEYSHQKNVMIH-WFLMTNEET-IEEI 108 (405)
T ss_dssp CEEEEEECCSBCTTT----TCCSBGGGCEECSSSCEEHHHHHHHHHHHHHHHHHHHHCCSCCCCE-EEEEECTTT-HHHH
T ss_pred ceEEEEecCCCcccc----cCCCCCccccccCCCCCcHHHHHHHHHHHHHHHHhhhccccCCCCC-EEEEeCCcc-HHHH
Confidence 467899999999999 77899999999 899999999988854 4566 445554332 4577
Q ss_pred HHhhhhh--cc-CceeeEEEEc---------------------CCCCChHHHHHHHHh-----cC---CCCcEEEEcCCc
Q 013012 66 GGWISAA--YV-DRLHVEVATV---------------------PEDVGTAGALRAIAH-----HL---TAKDVLVVSGDL 113 (451)
Q Consensus 66 ~~~~~~~--~~-~~~~~~i~~~---------------------~~~~gt~~~l~~~~~-----~l---~~~~~lvl~~D~ 113 (451)
.+|+.++ +. +.-++.+..| ..+.|+++..+.... .+ .-+++.|.+.|.
T Consensus 109 ~~~f~~~~~fGl~~~~i~~f~Q~~~P~i~~dg~i~l~~~~~i~~~P~GhGgi~~aL~~sG~Ld~l~~~Gieyi~v~nvDN 188 (405)
T 3oc9_A 109 NNYFKEHQYFGLSSEQIHCFPQGMLPVVDFNGKILYEKKDKPYMAPNGHGGLFKALKDNGILEFMNEKGIKYSVAHNVDN 188 (405)
T ss_dssp HHHHHHTGGGGSCTTSEEEEECCEEECBCTTSCBCEEETTEECEEECCGGGHHHHHHHTTHHHHHHHHTCCEEEEECTTB
T ss_pred HHHHHhCcccCCCccceEEEeeCceeEEecCCCeecCCCCccccccCCChHHHHHHHHCCcHHHHHhcCCEEEEEEeCCC
Confidence 8887653 21 1112333221 124677776665322 11 135788888996
Q ss_pred -cCCCCchHHHHHHHhcCceEEEEEeeeccCCCccCCCCCCcccCCCCCcccEEEe-cCCCceEEEeecccccccccccc
Q 013012 114 -VSDVPPGAVTAAHRRHDAVVTAMICSVPVSGLSEAGSSGAKDKTKKPGRYNIIGM-DPTKQFLLHIATGAELEKDTRIR 191 (451)
Q Consensus 114 -i~~~~~~~~l~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-d~~~~~l~~~~~~~~~ek~~~i~ 191 (451)
+.......++.+|.++++++++-+.+... + .+..|++.. |...+ +..+.+. .+....
T Consensus 189 ~L~~~~Dp~~lg~~~~~~~d~~~kvv~k~~--~--------------dek~Gvl~~~dg~~~-vvEysei---~~e~e~- 247 (405)
T 3oc9_A 189 ILCKDVDPNMIGYMDLLQSEICIKIVKKGF--K--------------EEKVGVLVKEQERIK-VVEYTEL---TDELNK- 247 (405)
T ss_dssp TTCCSSCHHHHHHHHHTTCSEEEEEEECCS--T--------------TCSCCEEEEETTEEE-EECGGGC---CTTTTC-
T ss_pred cccccCCHHHHHHHHHcCCCEEEEEEECCC--C--------------CCccceEEEECCeeE-EEEEeeC---CHHHhh-
Confidence 88888899999999999999888776431 1 134576664 43222 3333321 111000
Q ss_pred HHHHhhcCeeEEecCCccceEEeechHHHHHHH
Q 013012 192 KSILRAVGQMDIRADLMDAHMYAFNRSVLQEVL 224 (451)
Q Consensus 192 ~~~~~~~~~~~~~s~l~~~giYi~~~~~l~~~~ 224 (451)
+..+-....+..|.++|+|+.++|+.+.
T Consensus 248 -----~~~~g~l~fn~~Ni~~h~fs~~fL~~i~ 275 (405)
T 3oc9_A 248 -----QLSNGEFIYNCGHISINGYSTSFLEKAA 275 (405)
T ss_dssp -----BCTTSCBSSCEEEEEEEEEEHHHHHHHT
T ss_pred -----cCCCCceeeccceeEeeecCHHHHHHhh
Confidence 0001112335567889999999998775
No 131
>2rij_A Putative 2,3,4,5-tetrahydropyridine-2-carboxylate succinyltransferase; structural genomics, joint center for structural genomics; HET: MSE CIT; 1.90A {Campylobacter jejuni}
Probab=99.17 E-value=9.5e-11 Score=112.23 Aligned_cols=15 Identities=7% Similarity=0.011 Sum_probs=10.5
Q ss_pred EEeechHHHHHHHhc
Q 013012 212 MYAFNRSVLQEVLDQ 226 (451)
Q Consensus 212 iYi~~~~~l~~~~~~ 226 (451)
++-++++++..+++.
T Consensus 82 ~~~~~~~~~~~~~~~ 96 (387)
T 2rij_A 82 VQTLKLEDIDFALSC 96 (387)
T ss_dssp EEECCHHHHHHHHHH
T ss_pred eEeCCHHHHHHHHHH
Confidence 677888888766543
No 132
>3srt_A Maltose O-acetyltransferase; structural genomics, the center structural genomics of infectious diseases, csgid; 2.50A {Clostridium difficile} PDB: 4ebh_A*
Probab=99.15 E-value=1.8e-10 Score=101.30 Aligned_cols=86 Identities=20% Similarity=0.282 Sum_probs=57.4
Q ss_pred CCceeCCCCee--CCCcEECCCCEECCCCEECCCCEEeceEECCCCEECCCcEE-------------------eceEECC
Q 013012 344 QNNIIHPSAEL--GSKTTVGPHCMLGEGSQMGDKCSVKRSVIGRHCRIGSNVKV-------------------VNSVVMN 402 (451)
Q Consensus 344 ~~~~i~~~~~i--~~~~~i~~~~~i~~~~~i~~~~~i~~svig~~~~ig~~~~i-------------------~~s~i~~ 402 (451)
.+.+|.+++.+ +.++.||+++.|+.+|.|.+.+ ...||++|.||++|.| ..++|++
T Consensus 61 ~~~~I~~~~~~~~g~~~~IG~~~~i~~~~~i~~~~---~i~IG~~~~Ig~~v~I~~~~h~~~~~~~~~~~~~~~~v~IG~ 137 (188)
T 3srt_A 61 KQINVEQNIRCDYGYNIHVGENFFANYDCIFLDVC---KIEIGDNVMLAPNVQIYTAYHPIDAQLRNSGIEYGSPVKIGD 137 (188)
T ss_dssp SCEEECSCEEESSSTTEEECTTEEECTTEEEECSS---CEEECSSCEECTTCEEECEECCSSHHHHHTTEEEECCEEECS
T ss_pred CCCEEcCCEEEEeCCCeEECCcccccCceEEecCC---ceEECCeeEECCCcEEeeCCccCchhhccccceECCCcEECC
Confidence 45556665554 3344555555555555444433 2379999999999999 3567888
Q ss_pred CCEECCCcEEe-CeEECCCCEECCCcEEcce
Q 013012 403 HVTIGDGCSIQ-GSVICSNAQLQERVALKDC 432 (451)
Q Consensus 403 ~~~Ig~~~~i~-~~ii~~~~~i~~~~~i~~~ 432 (451)
+|.||.+|.|. ++.||++++|+++++|...
T Consensus 138 ~v~IG~~~~I~~gv~IG~~~vIgagsvV~~d 168 (188)
T 3srt_A 138 NVWIGGGVIITPGITIGDNVVIGAGSVVTKD 168 (188)
T ss_dssp SCEECTTCEECTTCEECSSEEECTTCEECSC
T ss_pred CcEEcCCCEECCCcEECCCCEECCCCEECcc
Confidence 88888887774 6777777777777777754
No 133
>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A*
Probab=99.14 E-value=1.9e-10 Score=117.12 Aligned_cols=89 Identities=12% Similarity=0.174 Sum_probs=50.7
Q ss_pred ccCCCceeCCCCeeCCCcEECCCCEECCCCEECCCCEEec----------------------------------eEECCC
Q 013012 341 FSAQNNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVKR----------------------------------SVIGRH 386 (451)
Q Consensus 341 ~~~~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~~----------------------------------svig~~ 386 (451)
++..+..+++++.|.+++.+.+++.++.+|.|++++.+.+ ++|+++
T Consensus 279 ~i~~dv~IG~dv~I~~~v~i~g~~~Ig~~~~I~~~~~i~~~~i~~~~~i~~~~i~~~~ig~~~~ig~~~~i~~~~~i~~~ 358 (501)
T 3st8_A 279 WIDVDVTIGRDTVIHPGTQLLGRTQIGGRCVVGPDTTLTDVAVGDGASVVRTHGSSSSIGDGAAVGPFTYLRPGTALGAD 358 (501)
T ss_dssp EECTTCEECTTCEECSSEEEETTCEECTTCEECSSCEEEEEEECTTCEECSEEEEEEEECTTCEECSSEEECTTCEECTT
T ss_pred cccCceEECCcceecceeeecCccccccceEEeeceeecCceEecCCEEEeecccccccccccccCCceeecCCcEEccc
Confidence 4445566666666666666666666666666555554432 344444
Q ss_pred CEECCCcEEeceEECCCCEECCCcEEeCeEECCCCEECCCcEE
Q 013012 387 CRIGSNVKVVNSVVMNHVTIGDGCSIQGSVICSNAQLQERVAL 429 (451)
Q Consensus 387 ~~ig~~~~i~~s~i~~~~~Ig~~~~i~~~ii~~~~~i~~~~~i 429 (451)
|.||+++.+.+|+|++++.|++.+.|++|+||++|.||+++++
T Consensus 359 v~IG~~v~ik~s~Ig~gskI~~~~~i~d~~Ig~~v~IG~g~i~ 401 (501)
T 3st8_A 359 GKLGAFVEVKNSTIGTGTKVPHLTYVGDADIGEYSNIGASSVF 401 (501)
T ss_dssp CEEEETEEEESCEECTTCEEEESCEEESEEECSSCEECTTCEE
T ss_pred cccCCeEEEccceecCCcEEeccceecCceEcCCCEECCCEEE
Confidence 4444444445555555555555555556666666666665544
No 134
>3mc4_A WW/RSP5/WWP domain:bacterial transferase hexapept repeat:serine O-acetyltransferase...; ssgcid, structural genomics; 1.95A {Brucella melitensis biovar abortus}
Probab=99.13 E-value=2.2e-10 Score=105.99 Aligned_cols=34 Identities=15% Similarity=0.213 Sum_probs=28.7
Q ss_pred eEECCCCEECCCcEEe-CeEECCCCEECCCcEEcc
Q 013012 398 SVVMNHVTIGDGCSIQ-GSVICSNAQLQERVALKD 431 (451)
Q Consensus 398 s~i~~~~~Ig~~~~i~-~~ii~~~~~i~~~~~i~~ 431 (451)
++|+++|.||.++.|. ++.||++++||++++|..
T Consensus 217 ~~IGd~v~IGaga~Il~gv~IG~~a~IGagsvV~k 251 (287)
T 3mc4_A 217 PKIRQGVLIGAGAKILGNIQVGQCSKIAAGSVVLK 251 (287)
T ss_dssp CEECTTCEECTTCEEESSCEECTTCEECTTCEECS
T ss_pred CEECCCCEECCCCEECCCcEECCCCEECCCCEEcc
Confidence 6888888888888874 788888888888888875
No 135
>3ftt_A Putative acetyltransferase sacol2570; galactoside O-acetyltransferase, enzyme, structural genomics, acyltransferase; 1.60A {Staphylococcus aureus subsp} PDB: 3v4e_A* 4dcl_A 4egg_A
Probab=99.12 E-value=1.8e-10 Score=102.18 Aligned_cols=93 Identities=15% Similarity=0.168 Sum_probs=58.8
Q ss_pred CCceeCCCCee--CCCcEECCCCEECCCCEECCCCEEeceEECCCCEECCCcEEe-------------------ceEECC
Q 013012 344 QNNIIHPSAEL--GSKTTVGPHCMLGEGSQMGDKCSVKRSVIGRHCRIGSNVKVV-------------------NSVVMN 402 (451)
Q Consensus 344 ~~~~i~~~~~i--~~~~~i~~~~~i~~~~~i~~~~~i~~svig~~~~ig~~~~i~-------------------~s~i~~ 402 (451)
.++.+.+++.+ +.++.||+++.|+++|+|.+++ ..+||++|.||++|.|. .++|++
T Consensus 59 ~~~~i~~~~~~~~g~~~~IG~~~~I~~~~~i~~~~---~v~IG~~v~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~v~IG~ 135 (199)
T 3ftt_A 59 DNVSISIPFDTDYGWNVKLGKNVYVNTNCYFMDGG---QITIGDNVFIGPNCGFYTATHPLNFHHRNEGFEKAGPIHIGS 135 (199)
T ss_dssp SSEEECSSEEESSSTTEEECSSEEECTTEEEECSS---CEEECSSEEECTTCEEECEECCSSHHHHHTTEEEECCEEECS
T ss_pred CCeEEeCCEEEEecCCcEECCCeEECCCeEEecCC---EEEECCCCEECCCCEEecCCCcCccccccccceecCCeEEcC
Confidence 35556555554 4445555555555555554332 24899999999999883 336777
Q ss_pred CCEECCCcEEe-CeEECCCCEECCCcEEcceEECCCCEE
Q 013012 403 HVTIGDGCSIQ-GSVICSNAQLQERVALKDCQVLSLSTS 440 (451)
Q Consensus 403 ~~~Ig~~~~i~-~~ii~~~~~i~~~~~i~~~~ig~~~~i 440 (451)
+|.||.+|.|. ++.||++++|+++++|... |.+++++
T Consensus 136 ~v~IG~~~~I~~gv~IG~~~vIgagsvV~~d-vp~~~v~ 173 (199)
T 3ftt_A 136 NTWFGGHVAVLPGVTIGEGSVIGAGSVVTKD-IPPHSLA 173 (199)
T ss_dssp SEEECTTCEECTTCEECTTCEECTTCEECSC-BCTTEEE
T ss_pred CcEEcCCCEECCCCEECCCCEECCCCEECcc-cCCCCEE
Confidence 77777777774 6777777777777777643 3444444
No 136
>2p2o_A Maltose transacetylase; GK1921, GKA001001921.1, geobacillus kaustophilus structural genomics, PSI; 1.74A {Geobacillus kaustophilus} PDB: 2ic7_A
Probab=99.12 E-value=2e-10 Score=100.52 Aligned_cols=81 Identities=25% Similarity=0.245 Sum_probs=59.4
Q ss_pred CCCEECCCCEECCCCEE---eceEECCCCEECCCcEEe-------------------ceEECCCCEECCCcEEe-CeEEC
Q 013012 362 PHCMLGEGSQMGDKCSV---KRSVIGRHCRIGSNVKVV-------------------NSVVMNHVTIGDGCSIQ-GSVIC 418 (451)
Q Consensus 362 ~~~~i~~~~~i~~~~~i---~~svig~~~~ig~~~~i~-------------------~s~i~~~~~Ig~~~~i~-~~ii~ 418 (451)
.++.||+++.|+.+|.| .+.+||++|.|+++|.|. .++|+++|.||.+|.|. ++.||
T Consensus 73 ~~v~IG~~~~i~~~~~i~~~~~i~IG~~v~Ig~~v~I~~~~h~~~~~~~~~~~~~~~~v~IGd~v~IG~~~~I~~gv~IG 152 (185)
T 2p2o_A 73 YNIHVGENFFMNFDGVILDVCEVRIGDHCFIGPGVHIYTATHPLDPHERNSGLEYGKPVVIGHNVWIGGRAVINPGVTIG 152 (185)
T ss_dssp TTEEECTTEEECSSEEEECSSCEEECTTCEECTTCEEECEECCSSHHHHHTCCBEECCEEECSSCEECTTCEECTTCEEC
T ss_pred CCEEECCeeEEcCCeEEEeccceEECCCcEEeCCCEEEcCCCcCChhhcccCccccCCeEEcCCeEECCCCEECCCCEEC
Confidence 34444444444444444 346899999999999884 47888888888888885 88888
Q ss_pred CCCEECCCcEEcceEECCCCEECCC
Q 013012 419 SNAQLQERVALKDCQVLSLSTSVFL 443 (451)
Q Consensus 419 ~~~~i~~~~~i~~~~ig~~~~i~~~ 443 (451)
++++|+++++|... |++++++..+
T Consensus 153 ~~~vIgagsvV~~~-vp~~~vv~G~ 176 (185)
T 2p2o_A 153 DNAVIASGAVVTKD-VPANAVVGGN 176 (185)
T ss_dssp TTCEECTTCEECSC-BCTTEEEEET
T ss_pred CCCEECCCCEECCC-CCCCcEEEcc
Confidence 88888888888754 6777776644
No 137
>3q1x_A Serine acetyltransferase; cysteine biosynthesis, LEFT handed helix, OASS; 1.59A {Entamoeba histolytica} PDB: 3p47_A 3p1b_A
Probab=99.12 E-value=2.5e-10 Score=107.25 Aligned_cols=91 Identities=16% Similarity=0.206 Sum_probs=48.1
Q ss_pred CCCCeeCCCcEECCCCEE--CCCCEECCCCEEeceEECCCCEECCCcEEe-ceEECCCCEECCCcEEeCeEECCCCEECC
Q 013012 349 HPSAELGSKTTVGPHCML--GEGSQMGDKCSVKRSVIGRHCRIGSNVKVV-NSVVMNHVTIGDGCSIQGSVICSNAQLQE 425 (451)
Q Consensus 349 ~~~~~i~~~~~i~~~~~i--~~~~~i~~~~~i~~svig~~~~ig~~~~i~-~s~i~~~~~Ig~~~~i~~~ii~~~~~i~~ 425 (451)
..++.|++++.||+++.| +.+++||++ ++||++|.|+++++|+ ++.+++++.++.++. ..++||++|+||+
T Consensus 161 ~~gv~I~p~a~IG~~v~I~~g~gvvIG~~-----~~IG~~v~I~~~vtIG~~~~ig~~~~i~~~~~-~~~~IGd~v~IGa 234 (313)
T 3q1x_A 161 YTSIDIHPGASIKGHFFIDHGVGVVIGET-----AIIGEWCRIYQSVTLGAMHFQEEGGVIKRGTK-RHPTVGDYVTIGT 234 (313)
T ss_dssp HHCCEECTTCEECSSCEESSCTTCEECTT-----CEECSSCEECTTCEEECCCCCCTTCCCCCCSS-CSCEECSSCEECT
T ss_pred cCCeEECCCCEECCCEEECCCCceEECCC-----cEECCCCEECCCcEEeCCcEECCCceEcCCCc-cCCEECCCCEECC
Confidence 345555555555555555 333444433 3555556665555554 345555555555441 2346666666666
Q ss_pred CcEEc-ceEECCCCEECCCCc
Q 013012 426 RVALK-DCQVLSLSTSVFLSL 445 (451)
Q Consensus 426 ~~~i~-~~~ig~~~~i~~~~~ 445 (451)
++.|. +++||++++|++++.
T Consensus 235 ga~Ilggv~IG~~a~IGagsv 255 (313)
T 3q1x_A 235 GAKVLGNIIVGSHVRIGANCW 255 (313)
T ss_dssp TCEEESSCEECSSEEECTTCE
T ss_pred CCEECCCcEECCCCEECCCCE
Confidence 66554 366666666665553
No 138
>1ocx_A Maltose O-acetyltransferase; LEFT-handed parallel beta-helix; 2.15A {Escherichia coli} SCOP: b.81.1.3
Probab=99.11 E-value=3.4e-10 Score=98.73 Aligned_cols=94 Identities=20% Similarity=0.214 Sum_probs=63.6
Q ss_pred CceeCCCCe--eCCCcEECCCCEECCCCEECCCCEEeceEECCCCEECCCcEEe-------------------ceEECCC
Q 013012 345 NNIIHPSAE--LGSKTTVGPHCMLGEGSQMGDKCSVKRSVIGRHCRIGSNVKVV-------------------NSVVMNH 403 (451)
Q Consensus 345 ~~~i~~~~~--i~~~~~i~~~~~i~~~~~i~~~~~i~~svig~~~~ig~~~~i~-------------------~s~i~~~ 403 (451)
+.+|++++. ++.++.||+++.|+.+|.|.+. ...+||++|.|+++|.|. +++|+++
T Consensus 58 ~~~I~~~~~~~~g~~v~IG~~~~I~~~~~i~~~---~~i~IG~~v~Ig~~v~I~~~~h~~~~~~~~~~~~~~~~v~IG~~ 134 (182)
T 1ocx_A 58 EAYIEPTFRCDYGYNIFLGNNFFANFDCVMLDV---CPIRIGDNCMLAPGVHIYTATHPIDPVARNSGAELGKPVTIGNN 134 (182)
T ss_dssp SEEECSCEEESSSTTEEECSSEEECSSEEEECS---SCEEECTTCEECTTCEEECEECCSSHHHHTTTCBEECCEEECTT
T ss_pred CEEEeCCEEEEeCCCEEECCCcEEeCCeEEEec---cceEEcCCcEEeCCcEEEeCCCccChhhcccCccccCCeEEeCC
Confidence 455666532 3444555555555555444332 246899999999999983 5788888
Q ss_pred CEECCCcEEe-CeEECCCCEECCCcEEcceEECCCCEECC
Q 013012 404 VTIGDGCSIQ-GSVICSNAQLQERVALKDCQVLSLSTSVF 442 (451)
Q Consensus 404 ~~Ig~~~~i~-~~ii~~~~~i~~~~~i~~~~ig~~~~i~~ 442 (451)
|.||.++.|. ++.||++++|+++++|... |++++++..
T Consensus 135 v~Ig~~a~I~~gv~IG~~~vIgagsvV~~d-ip~~~vv~G 173 (182)
T 1ocx_A 135 VWIGGRAVINPGVTIGDNVVVASGAVVTKD-VPDNVVVGG 173 (182)
T ss_dssp CEECTTCEECTTCEECTTCEECTTCEECSC-BCSSEEEET
T ss_pred eEECCCCEECCCcEECCCCEECCCCEECCc-CCCCcEEEc
Confidence 8888888874 7888888888888888754 566666553
No 139
>2wlg_A Polysialic acid O-acetyltransferase; enzyme, LEFT-handed beta HEL; HET: SOP; 1.90A {Neisseria meningitidis serogroup Y} PDB: 2wld_A 2wle_A* 2wlf_A* 2wlc_A*
Probab=99.11 E-value=2.4e-10 Score=102.84 Aligned_cols=95 Identities=18% Similarity=0.240 Sum_probs=74.7
Q ss_pred ceeCCCCeeCCCcEEC---CCCEECCCCEECCCCEE----eceEECCCCEECCCcEEec--------------------e
Q 013012 346 NIIHPSAELGSKTTVG---PHCMLGEGSQMGDKCSV----KRSVIGRHCRIGSNVKVVN--------------------S 398 (451)
Q Consensus 346 ~~i~~~~~i~~~~~i~---~~~~i~~~~~i~~~~~i----~~svig~~~~ig~~~~i~~--------------------s 398 (451)
..|++++.|++++.+. .++.||++|.|++.+.+ .+++||++|.|+++|+|.+ +
T Consensus 59 v~IG~~~~I~~~~~i~~~~~~~~IG~~~~Ig~~~ii~~~~~~i~IG~~~~Ig~~~~I~~~~~h~~~~~~~~~~~~~~~~v 138 (215)
T 2wlg_A 59 LFIADDVEIMGLVCSLHSDCSLQIQAKTTMGNGEITIAEKGKISIGKDCMLAHGYEIRNTDMHPIYSLENGERINHGKDV 138 (215)
T ss_dssp EEECTTCEEESEEEEECTTCEEEECTTCEECSEEEEECTTCEEEECTTCEECTTEEEESCCSSCEEETTTCBBCCCCCCE
T ss_pred EEECCCCEECCCeEEEcCCceEEEcCCCEECCEEEEEeCCCCEEECCCCEEcCCEEEECCCCcccccccccccccCCCCe
Confidence 6677777777777764 34889999999885555 5789999999999999985 3
Q ss_pred EECCCCEECCCcEEe-CeEECCCCEECCCcEEcceEECCCCEEC
Q 013012 399 VVMNHVTIGDGCSIQ-GSVICSNAQLQERVALKDCQVLSLSTSV 441 (451)
Q Consensus 399 ~i~~~~~Ig~~~~i~-~~ii~~~~~i~~~~~i~~~~ig~~~~i~ 441 (451)
+|+++|.||.++.|. ++.||++++|++++++... |.+++++.
T Consensus 139 ~Igd~v~IG~~~~I~~gv~Ig~~~vIgagsvV~~~-vp~~~i~~ 181 (215)
T 2wlg_A 139 IIGNHVWLGRNVTILKGVCIPNNVVVGSHTVLYKS-FKEPNCVI 181 (215)
T ss_dssp EECTTCEECTTCEECTTCEECSSCEECTTCEECSC-CCCCSCEE
T ss_pred EECCCcEECCCCEECCCCEECCCCEECCCCEEcCc-cCCCeEEE
Confidence 888888888888874 7888888888888888753 45665554
No 140
>3f1x_A Serine acetyltransferase; NESG X-RAY BVR62 A6KZB9 A6KZB9_BACV8, structural genomics, P protein structure initiative; 2.00A {Bacteroides vulgatus atcc 8482}
Probab=99.11 E-value=4.1e-10 Score=105.54 Aligned_cols=93 Identities=19% Similarity=0.264 Sum_probs=62.3
Q ss_pred CceeCCCCeeCCCcEE--CCCCEECCCCEECCCCEEeceEECCCCEECCCcEE------------eceEECCCCEECCCc
Q 013012 345 NNIIHPSAELGSKTTV--GPHCMLGEGSQMGDKCSVKRSVIGRHCRIGSNVKV------------VNSVVMNHVTIGDGC 410 (451)
Q Consensus 345 ~~~i~~~~~i~~~~~i--~~~~~i~~~~~i~~~~~i~~svig~~~~ig~~~~i------------~~s~i~~~~~Ig~~~ 410 (451)
+..|++++.|++++.| +.+++||++|+||++| .|+.+|.||.++.. ++++|+++|.||.+|
T Consensus 190 gv~I~p~a~IG~~v~I~hg~gvvIG~~~~IG~~v-----~I~~gvtIg~~~~~~~~~g~~i~~~~~~~~IGd~V~IGaga 264 (310)
T 3f1x_A 190 GIDIHPGAQIGHHFTIDHGTGVVIGATSIIGNNV-----KLYQGVTLGAKSFPLDNNGNPIKGIPRHPILEDDVIVYSNA 264 (310)
T ss_dssp SCEECTTCEECSSCEEESCTTCEECTTCEECSSC-----EEETTCEEECC--------------CCSCEECTTCEECTTC
T ss_pred CcEECCCCEECCCcEECCCCCeEECCceEEcCCC-----EECCCCEECCCccccccccccccCCCCCCEECCCcEEcCCC
Confidence 4456666666666666 5555555555555555 34445555444411 245899999999999
Q ss_pred EEe-CeEECCCCEECCCcEEcceEECCCCEECCC
Q 013012 411 SIQ-GSVICSNAQLQERVALKDCQVLSLSTSVFL 443 (451)
Q Consensus 411 ~i~-~~ii~~~~~i~~~~~i~~~~ig~~~~i~~~ 443 (451)
.|. ++.||++++||++++|... |.+++++..+
T Consensus 265 ~Il~gv~IGd~a~IGagsvV~~d-Vp~~svv~Gn 297 (310)
T 3f1x_A 265 TILGRVTIGKGATVGGNIWVTEN-VPAGSRIVQR 297 (310)
T ss_dssp EEESSCEECTTCEECSSCEECSC-BCTTCEECCC
T ss_pred EECCCcEECCCCEECCCCEECCc-cCCCcEEECC
Confidence 985 8999999999999999854 5666666543
No 141
>1yp2_A Glucose-1-phosphate adenylyltransferase small subunit; ADP-glucose synthase, ADP-glucose pyrophosphorylase, agpase B; HET: PMB; 2.11A {Solanum tuberosum} SCOP: b.81.1.4 c.68.1.6 PDB: 1yp3_A* 1yp4_A*
Probab=99.09 E-value=1.7e-10 Score=115.90 Aligned_cols=79 Identities=23% Similarity=0.198 Sum_probs=47.7
Q ss_pred ECCCCEECCCCEEeceEECCCCEECCCcEEeceEECCCCEECCCcEEeCeEECCC-------------------CEECCC
Q 013012 366 LGEGSQMGDKCSVKRSVIGRHCRIGSNVKVVNSVVMNHVTIGDGCSIQGSVICSN-------------------AQLQER 426 (451)
Q Consensus 366 i~~~~~i~~~~~i~~svig~~~~ig~~~~i~~s~i~~~~~Ig~~~~i~~~ii~~~-------------------~~i~~~ 426 (451)
|++++.| .++.|.+++||++|.|+. +.|.+++|+++|.||++|.|.++++..+ +.||++
T Consensus 317 i~~~~~i-~~~~I~~~~Ig~~~~I~~-~~i~~~~Ig~~~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~~~g~~~~~Ig~~ 394 (451)
T 1yp2_A 317 YLPPSKM-LDADVTDSVIGEGCVIKN-CKIHHSVVGLRSCISEGAIIEDSLLMGADYYETDADRKLLAAKGSVPIGIGKN 394 (451)
T ss_dssp CCCCEEE-EEEEEEEEEECTTCEEEE-EEEESCEECTTCEECTTCEEESCEECCCSSCCCHHHHHHHHTTTCCCSEECTT
T ss_pred cCCCeEE-cceEEeCeEECCCCEEcc-eEEeccEECCCCEECCCCEEcCceEECCCCcccccccccccccCceeEEECCC
Confidence 3333333 345555566666666664 6666666677777777666666655555 666666
Q ss_pred cEEcceEECCCCEECCCCcc
Q 013012 427 VALKDCQVLSLSTSVFLSLS 446 (451)
Q Consensus 427 ~~i~~~~ig~~~~i~~~~~~ 446 (451)
+.+.+|+||+++.|++++..
T Consensus 395 ~~i~~~~Ig~~~~IG~~~~i 414 (451)
T 1yp2_A 395 CHIKRAIIDKNARIGDNVKI 414 (451)
T ss_dssp CEEESEEECTTCEECTTCEE
T ss_pred CEEeccEeCCCcEECCCCEE
Confidence 66666666666666655543
No 142
>1krr_A Galactoside O-acetyltransferase; LEFT-handed parallel beta helix; HET: ACO; 2.50A {Escherichia coli} SCOP: b.81.1.3 PDB: 1kqa_A* 1kru_A* 1krv_A*
Probab=99.08 E-value=5.9e-10 Score=98.68 Aligned_cols=92 Identities=18% Similarity=0.248 Sum_probs=56.6
Q ss_pred CCceeCCCCeeCCCcEECCCCEECCCCEECCCCEEe---ceEECCCCEECCCcEEe-------------------ceEEC
Q 013012 344 QNNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVK---RSVIGRHCRIGSNVKVV-------------------NSVVM 401 (451)
Q Consensus 344 ~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~---~svig~~~~ig~~~~i~-------------------~s~i~ 401 (451)
.++.|.+++.+ .++.++.||+++.|+.+|.|. ..+||++|.||++|.|. .++|+
T Consensus 60 ~~~~I~~~~~~----~~g~~i~IG~~~~I~~~~~i~~~~~i~IG~~v~Ig~~v~I~~~~h~~~~~~~~~~~~~~~~v~IG 135 (203)
T 1krr_A 60 ENAWVEPPVYF----SYGSNIHIGRNFYANFNLTIVDDYTVTIGDNVLIAPNVTLSVTGHPVHHELRKNGEMYSFPITIG 135 (203)
T ss_dssp SSCEECSCEEE----SCSTTEEECSSCEECSCEEEECSSCEEECSSCEECSSCEEESEECCSSTTTCTTCCBEECCEEEC
T ss_pred CCcEEcCCeEE----EeCCCeEECCeeEECCccEEecccceEECCCCEECCCCEEecCCcccchhhcccCceeCCCcEEC
Confidence 34555555432 124455555555555555554 36899999999999874 25667
Q ss_pred CCCEECCCcEEe-CeEECCCCEECCCcEEcceEECCCCEE
Q 013012 402 NHVTIGDGCSIQ-GSVICSNAQLQERVALKDCQVLSLSTS 440 (451)
Q Consensus 402 ~~~~Ig~~~~i~-~~ii~~~~~i~~~~~i~~~~ig~~~~i 440 (451)
++|.||.+|.|. ++.||++++|+++++|... |.+++++
T Consensus 136 d~v~IG~~a~I~~gv~IG~~~vIgagsvV~~d-vp~~~vv 174 (203)
T 1krr_A 136 NNVWIGSHVVINPGVTIGDNSVIGAGSIVTKD-IPPNVVA 174 (203)
T ss_dssp TTCEECTTCEECTTCEECTTCEECTTCEECSC-BCTTEEE
T ss_pred CCeEECCCCEEeCCeEECCCCEECCCCEECCC-cCCCcEE
Confidence 777777777664 6677777777777766643 4455443
No 143
>2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A*
Probab=99.07 E-value=2.1e-10 Score=115.36 Aligned_cols=83 Identities=12% Similarity=0.211 Sum_probs=69.5
Q ss_pred CCEECCCCEECCCCEEeceEECCCCEECCCcEEe-ceEECCCCEECCCcEEeCeEECCCCEECCCcEEcceEECCCCEEC
Q 013012 363 HCMLGEGSQMGDKCSVKRSVIGRHCRIGSNVKVV-NSVVMNHVTIGDGCSIQGSVICSNAQLQERVALKDCQVLSLSTSV 441 (451)
Q Consensus 363 ~~~i~~~~~i~~~~~i~~svig~~~~ig~~~~i~-~s~i~~~~~Ig~~~~i~~~ii~~~~~i~~~~~i~~~~ig~~~~i~ 441 (451)
++.||++|.|+++|.|.+++||++|.||+++.|. +++|++++.||+++.|.+++|++++.+++.+.+++++||+++.|+
T Consensus 300 ~~~ig~~~~I~~~~~i~~~~ig~~~~I~~~~~i~~~~~ig~~~~ig~~~~i~~~~i~~~~~i~~~~~~~~~~Ig~~v~Ig 379 (456)
T 2v0h_A 300 NVVIGNDVEIKPYSVLEDSIVGEKAAIGPFSRLRPGAELAAETHVGNFVEIKKSTVGKGSKVNHLTYVGDSEIGSNCNIG 379 (456)
T ss_dssp EEEECTTCEECSSCEEEEEEECTTCEECSSEEECTTCEECTTCEEEEEEEEESCEECTTCEEEEEEEEESEEECTTCEEC
T ss_pred eEEEeCCCEEcCCeEEccCcCCCCcEECCccEECCCCEECCCCEECCCCEEeccEECCCCEeccceeecCcEECCCcEEC
Confidence 3446777888888888888889999999998887 788899999999888888889999888888888778888888888
Q ss_pred CCCc
Q 013012 442 FLSL 445 (451)
Q Consensus 442 ~~~~ 445 (451)
+++.
T Consensus 380 ~~~~ 383 (456)
T 2v0h_A 380 AGVI 383 (456)
T ss_dssp TTCE
T ss_pred CceE
Confidence 8774
No 144
>1ssq_A SAT, serine acetyltransferase; LEFT-handed parallel beta helix; 1.85A {Haemophilus influenzae} SCOP: b.81.1.6 PDB: 1sst_A* 1s80_A 1ssm_A 3gvd_A*
Probab=99.05 E-value=1.4e-09 Score=99.96 Aligned_cols=86 Identities=23% Similarity=0.301 Sum_probs=51.7
Q ss_pred CceeCCCCeeCCCcEECCCCEECCCCEECCCCEEeceEECCCCEECCCcEEec---------eEECCCCEECCCcEE-eC
Q 013012 345 NNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVKRSVIGRHCRIGSNVKVVN---------SVVMNHVTIGDGCSI-QG 414 (451)
Q Consensus 345 ~~~i~~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~~svig~~~~ig~~~~i~~---------s~i~~~~~Ig~~~~i-~~ 414 (451)
...|++++.|++++.|+.+ .+++||++| +||++|.|+++++|++ ++|+++|.||.++.| ++
T Consensus 137 g~~I~p~a~IG~g~~I~~~----~~vvIG~~~-----~IG~~v~I~~gvtig~~~~~~~~~~~~IGd~v~IGaga~Il~g 207 (267)
T 1ssq_A 137 DVDIHPAAKIGHGIMFDHA----TGIVVGETS-----VIENDVSILQGVTLGGTGKESGDRHPKVREGVMIGAGAKILGN 207 (267)
T ss_dssp SCEECTTCEECSSCEESSC----TTCEECTTC-----EECTTCEECTTCEEECCSSSCSSCSCEECTTCEECTTCEEESS
T ss_pred ceEeCCCCEECCCEEECCC----CceEECCee-----EECCCCEEcCCcEECCCcccCCCCCeEECCCeEEcCCCEEeCC
Confidence 3445565555555555421 123333322 4455555555555543 688888888888887 47
Q ss_pred eEECCCCEECCCcEEcceEECCCCEE
Q 013012 415 SVICSNAQLQERVALKDCQVLSLSTS 440 (451)
Q Consensus 415 ~ii~~~~~i~~~~~i~~~~ig~~~~i 440 (451)
+.||++++||++++|... |.+++++
T Consensus 208 v~IG~~a~IGagsvV~~d-Vp~~~~v 232 (267)
T 1ssq_A 208 IEVGKYAKIGANSVVLNP-VPEYATA 232 (267)
T ss_dssp CEECTTCEECTTCEECSC-BCTTCEE
T ss_pred cEECCCCEECCCCEEccC-CCCCCEE
Confidence 888888888888888743 3455443
No 145
>4hur_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); HET: ACO; 2.15A {Staphylococcus aureus} PDB: 4hus_A* 4e8l_A
Probab=99.02 E-value=1.1e-09 Score=98.77 Aligned_cols=95 Identities=20% Similarity=0.210 Sum_probs=58.6
Q ss_pred CceeCCCCeeCCCcEEC-CCCEECCCCEECCCCEEec-eEECCCCEECCCcEE---------------------------
Q 013012 345 NNIIHPSAELGSKTTVG-PHCMLGEGSQMGDKCSVKR-SVIGRHCRIGSNVKV--------------------------- 395 (451)
Q Consensus 345 ~~~i~~~~~i~~~~~i~-~~~~i~~~~~i~~~~~i~~-svig~~~~ig~~~~i--------------------------- 395 (451)
+..+++++.||++++|+ .+..+.++|+|++++.|.+ ++||++|.|+++++|
T Consensus 29 ~~v~~~~v~IG~~t~i~~~~~~~~~~~vI~~~~~Ig~~v~IG~~~~Ig~~v~i~~~g~~~~~~~~~~~~~~~~~~~~~~~ 108 (220)
T 4hur_A 29 PTITNENILVGEYSYYDSKRGESFEDQVLYHYEVIGDKLIIGRFCSIGPGTTFIMNGANHRMDGSTYPFHLFRMGWEKYM 108 (220)
T ss_dssp GGCCSTTEEECTTCEEECSSSCCGGGGEESCCTTTCCCEEECSSCEECTTCEEECGGGCCCCSSCCCCGGGGCTTGGGGC
T ss_pred ceEECCCEEECCCeEECCcCCcccCCeEEeCCCEECCCeEECCCCEECCCCEEEECCCCcccCCcceeeeeecccccccc
Confidence 34444555555555441 1222334667777776664 688888888888875
Q ss_pred ---------eceEECCCCEECCCcEEe-CeEECCCCEECCCcEEcceEECCCCEE
Q 013012 396 ---------VNSVVMNHVTIGDGCSIQ-GSVICSNAQLQERVALKDCQVLSLSTS 440 (451)
Q Consensus 396 ---------~~s~i~~~~~Ig~~~~i~-~~ii~~~~~i~~~~~i~~~~ig~~~~i 440 (451)
++++|+++|.||.+|.|. ++.||++|+|+++++|... |.+++++
T Consensus 109 ~~~~~~~~~g~v~IG~~v~IG~~a~I~~gv~IG~gavIgagsvV~~d-Vp~~~vv 162 (220)
T 4hur_A 109 PSLKDLPLKGDIEIGNDVWIGRDVTIMPGVKIGDGAIIAAEAVVTKN-VAPYSIV 162 (220)
T ss_dssp CCGGGSCCCCCEEECSSCEECTTCEECTTCEECTTCEECTTCEECSC-BCTTEEE
T ss_pred cccccccccCCeEECCCcEECCCCEEeCCCEECCCCEEcCCCEEccc-CCCCcEE
Confidence 246677777777777764 6777777777777776643 3444444
No 146
>2rij_A Putative 2,3,4,5-tetrahydropyridine-2-carboxylate succinyltransferase; structural genomics, joint center for structural genomics; HET: MSE CIT; 1.90A {Campylobacter jejuni}
Probab=99.02 E-value=8.4e-10 Score=105.70 Aligned_cols=28 Identities=4% Similarity=-0.210 Sum_probs=11.8
Q ss_pred eEECCCCEECCCcEEcceEECCCCEECCC
Q 013012 415 SVICSNAQLQERVALKDCQVLSLSTSVFL 443 (451)
Q Consensus 415 ~ii~~~~~i~~~~~i~~~~ig~~~~i~~~ 443 (451)
++||++|.||.++. .+++||++++|+++
T Consensus 291 VvIGdnv~IGagAv-~GV~IGdgavIGAG 318 (387)
T 2rij_A 291 ISVGKACLLGANSV-TGIPLGDNCIVDAG 318 (387)
T ss_dssp CEECTTCEECTTCE-ECSCBCTTCEECTT
T ss_pred eEEeCCCEECCCCc-CCcEECCCCEECCC
Confidence 44444444444444 33333333333333
No 147
>3nz2_A Hexapeptide-repeat containing-acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: ACO; 2.35A {Vibrio cholerae o1 biovar eltor} SCOP: b.81.1.0 PDB: 3ect_A*
Probab=99.01 E-value=1.5e-09 Score=95.82 Aligned_cols=40 Identities=8% Similarity=-0.007 Sum_probs=23.7
Q ss_pred cccCCCceeCCCCeeCCCcEEC--CCCEECCCCEECCCCEEe
Q 013012 340 NFSAQNNIIHPSAELGSKTTVG--PHCMLGEGSQMGDKCSVK 379 (451)
Q Consensus 340 ~~~~~~~~i~~~~~i~~~~~i~--~~~~i~~~~~i~~~~~i~ 379 (451)
..++.+..|++++.|+.++.|. ..+.||++|.|+++|.|.
T Consensus 71 ~~ig~~v~IG~~~~I~~~~~i~~~~~i~IG~~~~Ig~~~~I~ 112 (195)
T 3nz2_A 71 CEFGKTIRIGDHTFINMNVVMLDGAPITIGDHVLIGPSTQFY 112 (195)
T ss_dssp ESCSTTEEECTTCEECTTEEEECSSCEEECTTCEECTTCEEE
T ss_pred EEeCCCeEECCCcEECcCCEEecCceEEECCCCEECCCCEEe
Confidence 3344556666666666666662 334666667777666654
No 148
>1t3d_A SAT, serine acetyltransferase; LEFT-handed-beta-helix, dimer of trimers; 2.20A {Escherichia coli} SCOP: b.81.1.6
Probab=99.01 E-value=2.4e-09 Score=99.22 Aligned_cols=84 Identities=21% Similarity=0.275 Sum_probs=52.4
Q ss_pred CceeCCCCeeCCCcEECC--CCEECCCCEECCCCEEeceEECCCCEECCCcEEe---------ceEECCCCEECCCcEE-
Q 013012 345 NNIIHPSAELGSKTTVGP--HCMLGEGSQMGDKCSVKRSVIGRHCRIGSNVKVV---------NSVVMNHVTIGDGCSI- 412 (451)
Q Consensus 345 ~~~i~~~~~i~~~~~i~~--~~~i~~~~~i~~~~~i~~svig~~~~ig~~~~i~---------~s~i~~~~~Ig~~~~i- 412 (451)
...|++++.|++++.|+. +++||++|+ ||++|.|+++++|+ +++|+++|.||.++.|
T Consensus 157 g~~I~p~a~IG~gv~I~~g~gvvIG~~~~-----------IG~~v~I~~gvtLg~~~~~~~~~~~~IGd~v~IGaga~Il 225 (289)
T 1t3d_A 157 QVDIHPAAKIGRGIMLDHATGIVVGETAV-----------IENDVSILQSVTLGGTGKSGGDRHPKIREGVMIGAGAKIL 225 (289)
T ss_dssp SCEECTTCEECSSCEECSCTTCEECTTCE-----------ECSSCEECTTCEEECCSSSCSSCSCEECTTCEECTTCEEE
T ss_pred ceEEcCCCEEcCCEEECCCCceEECCCcE-----------ECCCCEEcCCcEECCCccccCCCCeEECCCeEECCCCEEe
Confidence 445666666666666542 334444433 34444444444443 4788899999988887
Q ss_pred eCeEECCCCEECCCcEEcceEECCCCEE
Q 013012 413 QGSVICSNAQLQERVALKDCQVLSLSTS 440 (451)
Q Consensus 413 ~~~ii~~~~~i~~~~~i~~~~ig~~~~i 440 (451)
+++.||++++||++++|... |.+++++
T Consensus 226 ggv~IG~~a~IGagsvV~~d-Vp~~s~v 252 (289)
T 1t3d_A 226 GNIEVGRGAKIGAGSVVLQP-VPPHTTA 252 (289)
T ss_dssp SSCEECTTCEECTTCEECSC-BCTTCEE
T ss_pred cCcEECCCCEECCCCEEccC-CCCCCEE
Confidence 47888999999888888743 4455444
No 149
>3hjj_A Maltose O-acetyltransferase; LEFT-handed beta-helix, acyltransferase, struct genomics; 2.15A {Bacillus anthracis} SCOP: b.81.1.0 PDB: 3igj_A*
Probab=99.01 E-value=3e-09 Score=93.59 Aligned_cols=36 Identities=8% Similarity=0.013 Sum_probs=21.8
Q ss_pred CCCceeCCCCeeCCCcEECC--CCEECCCCEECCCCEE
Q 013012 343 AQNNIIHPSAELGSKTTVGP--HCMLGEGSQMGDKCSV 378 (451)
Q Consensus 343 ~~~~~i~~~~~i~~~~~i~~--~~~i~~~~~i~~~~~i 378 (451)
+.+..|++++.|++++.|.. ++.||++|.|+++|.|
T Consensus 76 g~~v~IG~~~~I~~~~~i~~~~~v~IG~~~~Ig~~~~I 113 (190)
T 3hjj_A 76 GYNIHVGKSFFANFNCVILDVCEVRIGDHCMFAPGVHI 113 (190)
T ss_dssp STTEEECTTCEECTTCEEECSSCEEECTTCEECTTCEE
T ss_pred CCceEECCceeeCCCeEEEeCCCeEECCceEEcCCcEE
Confidence 44555666666666666643 4466666666666666
No 150
>3srt_A Maltose O-acetyltransferase; structural genomics, the center structural genomics of infectious diseases, csgid; 2.50A {Clostridium difficile} PDB: 4ebh_A*
Probab=99.01 E-value=1.3e-09 Score=95.72 Aligned_cols=70 Identities=16% Similarity=0.219 Sum_probs=36.4
Q ss_pred CCceeCCCCeeCCCcEECC--CCEECCCCEECCCCEE-------------------eceEECCCCEECCCcEEe-ceEEC
Q 013012 344 QNNIIHPSAELGSKTTVGP--HCMLGEGSQMGDKCSV-------------------KRSVIGRHCRIGSNVKVV-NSVVM 401 (451)
Q Consensus 344 ~~~~i~~~~~i~~~~~i~~--~~~i~~~~~i~~~~~i-------------------~~svig~~~~ig~~~~i~-~s~i~ 401 (451)
.+..|++++.++.++.+.. .+.||++|.|+++|.| .+++||++|.||.+|.|. +++|+
T Consensus 75 ~~~~IG~~~~i~~~~~i~~~~~i~IG~~~~Ig~~v~I~~~~h~~~~~~~~~~~~~~~~v~IG~~v~IG~~~~I~~gv~IG 154 (188)
T 3srt_A 75 YNIHVGENFFANYDCIFLDVCKIEIGDNVMLAPNVQIYTAYHPIDAQLRNSGIEYGSPVKIGDNVWIGGGVIITPGITIG 154 (188)
T ss_dssp TTEEECTTEEECTTEEEECSSCEEECSSCEECTTCEEECEECCSSHHHHHTTEEEECCEEECSSCEECTTCEECTTCEEC
T ss_pred CCeEECCcccccCceEEecCCceEECCeeEECCCcEEeeCCccCchhhccccceECCCcEECCCcEEcCCCEECCCcEEC
Confidence 4455555555555555533 3366667777777666 234455555555544443 34444
Q ss_pred CCCEECCCcEEe
Q 013012 402 NHVTIGDGCSIQ 413 (451)
Q Consensus 402 ~~~~Ig~~~~i~ 413 (451)
+++.||.++.|.
T Consensus 155 ~~~vIgagsvV~ 166 (188)
T 3srt_A 155 DNVVIGAGSVVT 166 (188)
T ss_dssp SSEEECTTCEEC
T ss_pred CCCEECCCCEEC
Confidence 444444444444
No 151
>3ftt_A Putative acetyltransferase sacol2570; galactoside O-acetyltransferase, enzyme, structural genomics, acyltransferase; 1.60A {Staphylococcus aureus subsp} PDB: 3v4e_A* 4dcl_A 4egg_A
Probab=99.00 E-value=1.1e-09 Score=97.17 Aligned_cols=37 Identities=11% Similarity=0.193 Sum_probs=26.6
Q ss_pred cCCCceeCCCCeeCCCcEEC--CCCEECCCCEECCCCEE
Q 013012 342 SAQNNIIHPSAELGSKTTVG--PHCMLGEGSQMGDKCSV 378 (451)
Q Consensus 342 ~~~~~~i~~~~~i~~~~~i~--~~~~i~~~~~i~~~~~i 378 (451)
++.+..|++++.|++++.|. ..+.||++|.|+++|.|
T Consensus 71 ~g~~~~IG~~~~I~~~~~i~~~~~v~IG~~v~Ig~~~~I 109 (199)
T 3ftt_A 71 YGWNVKLGKNVYVNTNCYFMDGGQITIGDNVFIGPNCGF 109 (199)
T ss_dssp SSTTEEECSSEEECTTEEEECSSCEEECSSEEECTTCEE
T ss_pred ecCCcEECCCeEECCCeEEecCCEEEECCCCEECCCCEE
Confidence 35667777777777777773 34678888888888877
No 152
>4hur_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); HET: ACO; 2.15A {Staphylococcus aureus} PDB: 4hus_A* 4e8l_A
Probab=99.00 E-value=4.8e-10 Score=101.09 Aligned_cols=34 Identities=6% Similarity=-0.000 Sum_probs=24.7
Q ss_pred CeEECCCCEECCCcEEc-ceEECCCCEECCCCccC
Q 013012 414 GSVICSNAQLQERVALK-DCQVLSLSTSVFLSLSS 447 (451)
Q Consensus 414 ~~ii~~~~~i~~~~~i~-~~~ig~~~~i~~~~~~~ 447 (451)
+++||++|.||.+++|. +++||+|++|++++...
T Consensus 119 ~v~IG~~v~IG~~a~I~~gv~IG~gavIgagsvV~ 153 (220)
T 4hur_A 119 DIEIGNDVWIGRDVTIMPGVKIGDGAIIAAEAVVT 153 (220)
T ss_dssp CEEECSSCEECTTCEECTTCEECTTCEECTTCEEC
T ss_pred CeEECCCcEECCCCEEeCCCEECCCCEEcCCCEEc
Confidence 46677888888777777 47777777777777543
No 153
>3mc4_A WW/RSP5/WWP domain:bacterial transferase hexapept repeat:serine O-acetyltransferase...; ssgcid, structural genomics; 1.95A {Brucella melitensis biovar abortus}
Probab=98.99 E-value=1.5e-09 Score=100.29 Aligned_cols=74 Identities=18% Similarity=0.201 Sum_probs=44.8
Q ss_pred CCCceeCCCCeeC--CCcEECCCCEECCCCEECCCCEEec---------eEECCCCEECCCcEEe-ceEECCCCEECCCc
Q 013012 343 AQNNIIHPSAELG--SKTTVGPHCMLGEGSQMGDKCSVKR---------SVIGRHCRIGSNVKVV-NSVVMNHVTIGDGC 410 (451)
Q Consensus 343 ~~~~~i~~~~~i~--~~~~i~~~~~i~~~~~i~~~~~i~~---------svig~~~~ig~~~~i~-~s~i~~~~~Ig~~~ 410 (451)
++++.|++++.|+ .+++||+++.||++|.|++++.|.. ++||++|.||.+|+|. +++|++++.||.++
T Consensus 168 ~p~a~IG~~v~I~hg~gvvIG~~~~IGd~v~I~~gvtIg~~~~~~~~r~~~IGd~v~IGaga~Il~gv~IG~~a~IGags 247 (287)
T 3mc4_A 168 HPAARLGSGLFLDHATGLVVGETAVVEDNVSILHGVTLGGTGKSSGDRHPKIRQGVLIGAGAKILGNIQVGQCSKIAAGS 247 (287)
T ss_dssp CTTCEECSSCEEESCTTCEECTTCEECSSCEEETTCEEEC-----CCCSCEECTTCEECTTCEEESSCEECTTCEECTTC
T ss_pred CCCCEECCCeEEccCCCeEECCCeEECCCCEEcCCCEEcCCcccCCCcCCEECCCCEECCCCEECCCcEECCCCEECCCC
Confidence 3444555555554 4455555566666666666666653 4677777777777665 56667777777666
Q ss_pred EEeCeE
Q 013012 411 SIQGSV 416 (451)
Q Consensus 411 ~i~~~i 416 (451)
+|...+
T Consensus 248 vV~kdV 253 (287)
T 3mc4_A 248 VVLKSV 253 (287)
T ss_dssp EECSCB
T ss_pred EEcccc
Confidence 666443
No 154
>1krr_A Galactoside O-acetyltransferase; LEFT-handed parallel beta helix; HET: ACO; 2.50A {Escherichia coli} SCOP: b.81.1.3 PDB: 1kqa_A* 1kru_A* 1krv_A*
Probab=98.91 E-value=8.9e-09 Score=91.08 Aligned_cols=87 Identities=21% Similarity=0.252 Sum_probs=50.3
Q ss_pred cCCCceeCCCCeeCCCcEECC--CCEECCCCEECCCCEEece-------------EECCCCEECCCcEEe-ceEECCCCE
Q 013012 342 SAQNNIIHPSAELGSKTTVGP--HCMLGEGSQMGDKCSVKRS-------------VIGRHCRIGSNVKVV-NSVVMNHVT 405 (451)
Q Consensus 342 ~~~~~~i~~~~~i~~~~~i~~--~~~i~~~~~i~~~~~i~~s-------------vig~~~~ig~~~~i~-~s~i~~~~~ 405 (451)
++.+..|++++.|+.++.|.. .+.||++|.|+++|.|..+ .++.++.||++|+|+ +++|+++++
T Consensus 72 ~g~~i~IG~~~~I~~~~~i~~~~~i~IG~~v~Ig~~v~I~~~~h~~~~~~~~~~~~~~~~v~IGd~v~IG~~a~I~~gv~ 151 (203)
T 1krr_A 72 YGSNIHIGRNFYANFNLTIVDDYTVTIGDNVLIAPNVTLSVTGHPVHHELRKNGEMYSFPITIGNNVWIGSHVVINPGVT 151 (203)
T ss_dssp CSTTEEECSSCEECSCEEEECSSCEEECSSCEECSSCEEESEECCSSTTTCTTCCBEECCEEECTTCEECTTCEECTTCE
T ss_pred eCCCeEECCeeEECCccEEecccceEECCCCEECCCCEEecCCcccchhhcccCceeCCCcEECCCeEECCCCEEeCCeE
Confidence 355666777777777766643 4678888888888877421 133445555555554 455555555
Q ss_pred ECCCcEEe-CeEECCCCEECCCcEEc
Q 013012 406 IGDGCSIQ-GSVICSNAQLQERVALK 430 (451)
Q Consensus 406 Ig~~~~i~-~~ii~~~~~i~~~~~i~ 430 (451)
||++|.|+ +|+|.++ |.+++++.
T Consensus 152 IG~~~vIgagsvV~~d--vp~~~vv~ 175 (203)
T 1krr_A 152 IGDNSVIGAGSIVTKD--IPPNVVAA 175 (203)
T ss_dssp ECTTCEECTTCEECSC--BCTTEEEE
T ss_pred ECCCCEECCCCEECCC--cCCCcEEE
Confidence 55555553 4444444 45555443
No 155
>3f1x_A Serine acetyltransferase; NESG X-RAY BVR62 A6KZB9 A6KZB9_BACV8, structural genomics, P protein structure initiative; 2.00A {Bacteroides vulgatus atcc 8482}
Probab=98.89 E-value=5.5e-09 Score=97.90 Aligned_cols=15 Identities=20% Similarity=0.430 Sum_probs=6.3
Q ss_pred EECCCCEECCCcEEe
Q 013012 382 VIGRHCRIGSNVKVV 396 (451)
Q Consensus 382 vig~~~~ig~~~~i~ 396 (451)
+||++|.|+++++|+
T Consensus 218 ~IG~~v~I~~gvtIg 232 (310)
T 3f1x_A 218 IIGNNVKLYQGVTLG 232 (310)
T ss_dssp EECSSCEEETTCEEE
T ss_pred EEcCCCEECCCCEEC
Confidence 344444444444443
No 156
>1ssq_A SAT, serine acetyltransferase; LEFT-handed parallel beta helix; 1.85A {Haemophilus influenzae} SCOP: b.81.1.6 PDB: 1sst_A* 1s80_A 1ssm_A 3gvd_A*
Probab=98.88 E-value=1.1e-08 Score=93.86 Aligned_cols=75 Identities=13% Similarity=0.147 Sum_probs=61.5
Q ss_pred ccCCCceeCCCCeeC--CCcEECCCCEECCCCEECCCCEEec---------eEECCCCEECCCcEEe-ceEECCCCEECC
Q 013012 341 FSAQNNIIHPSAELG--SKTTVGPHCMLGEGSQMGDKCSVKR---------SVIGRHCRIGSNVKVV-NSVVMNHVTIGD 408 (451)
Q Consensus 341 ~~~~~~~i~~~~~i~--~~~~i~~~~~i~~~~~i~~~~~i~~---------svig~~~~ig~~~~i~-~s~i~~~~~Ig~ 408 (451)
.+++.+.|++++.|+ .+++||+++.||++|.|++++.|.. ++||++|.||.+++|. +++|++++.||.
T Consensus 139 ~I~p~a~IG~g~~I~~~~~vvIG~~~~IG~~v~I~~gvtig~~~~~~~~~~~~IGd~v~IGaga~Il~gv~IG~~a~IGa 218 (267)
T 1ssq_A 139 DIHPAAKIGHGIMFDHATGIVVGETSVIENDVSILQGVTLGGTGKESGDRHPKVREGVMIGAGAKILGNIEVGKYAKIGA 218 (267)
T ss_dssp EECTTCEECSSCEESSCTTCEECTTCEECTTCEECTTCEEECCSSSCSSCSCEECTTCEECTTCEEESSCEECTTCEECT
T ss_pred EeCCCCEECCCEEECCCCceEECCeeEECCCCEEcCCcEECCCcccCCCCCeEECCCeEEcCCCEEeCCcEECCCCEECC
Confidence 456777888888887 4688888999999999999998875 5899999999988886 688888888888
Q ss_pred CcEEeCe
Q 013012 409 GCSIQGS 415 (451)
Q Consensus 409 ~~~i~~~ 415 (451)
|++|...
T Consensus 219 gsvV~~d 225 (267)
T 1ssq_A 219 NSVVLNP 225 (267)
T ss_dssp TCEECSC
T ss_pred CCEEccC
Confidence 8888654
No 157
>1t3d_A SAT, serine acetyltransferase; LEFT-handed-beta-helix, dimer of trimers; 2.20A {Escherichia coli} SCOP: b.81.1.6
Probab=98.85 E-value=1.7e-08 Score=93.45 Aligned_cols=75 Identities=17% Similarity=0.190 Sum_probs=58.2
Q ss_pred ccCCCceeCCCCeeC--CCcEECCCCEECCCCEECCCCEEec---------eEECCCCEECCCcEEe-ceEECCCCEECC
Q 013012 341 FSAQNNIIHPSAELG--SKTTVGPHCMLGEGSQMGDKCSVKR---------SVIGRHCRIGSNVKVV-NSVVMNHVTIGD 408 (451)
Q Consensus 341 ~~~~~~~i~~~~~i~--~~~~i~~~~~i~~~~~i~~~~~i~~---------svig~~~~ig~~~~i~-~s~i~~~~~Ig~ 408 (451)
.+++++.|++++.|+ .+++||+++.||++|.|++++.|.. ++||++|.||.+|.|. +++|++++.||.
T Consensus 159 ~I~p~a~IG~gv~I~~g~gvvIG~~~~IG~~v~I~~gvtLg~~~~~~~~~~~~IGd~v~IGaga~Ilggv~IG~~a~IGa 238 (289)
T 1t3d_A 159 DIHPAAKIGRGIMLDHATGIVVGETAVIENDVSILQSVTLGGTGKSGGDRHPKIREGVMIGAGAKILGNIEVGRGAKIGA 238 (289)
T ss_dssp EECTTCEECSSCEECSCTTCEECTTCEECSSCEECTTCEEECCSSSCSSCSCEECTTCEECTTCEEESSCEECTTCEECT
T ss_pred EEcCCCEEcCCEEECCCCceEECCCcEECCCCEEcCCcEECCCccccCCCCeEECCCeEECCCCEEecCcEECCCCEECC
Confidence 456777888888886 4678888888888888888888874 5788888888888775 577777777777
Q ss_pred CcEEeCe
Q 013012 409 GCSIQGS 415 (451)
Q Consensus 409 ~~~i~~~ 415 (451)
|++|...
T Consensus 239 gsvV~~d 245 (289)
T 1t3d_A 239 GSVVLQP 245 (289)
T ss_dssp TCEECSC
T ss_pred CCEEccC
Confidence 7777643
No 158
>2p2o_A Maltose transacetylase; GK1921, GKA001001921.1, geobacillus kaustophilus structural genomics, PSI; 1.74A {Geobacillus kaustophilus} PDB: 2ic7_A
Probab=98.81 E-value=2.2e-08 Score=87.45 Aligned_cols=73 Identities=14% Similarity=0.171 Sum_probs=47.5
Q ss_pred ccCCCceeCCCCeeCCCcEEC--CCCEECCCCEECCCCEEe-------------------ceEECCCCEECCCcEEe-ce
Q 013012 341 FSAQNNIIHPSAELGSKTTVG--PHCMLGEGSQMGDKCSVK-------------------RSVIGRHCRIGSNVKVV-NS 398 (451)
Q Consensus 341 ~~~~~~~i~~~~~i~~~~~i~--~~~~i~~~~~i~~~~~i~-------------------~svig~~~~ig~~~~i~-~s 398 (451)
.++.+..|++++.+..++.|. .++.||++|.|+++|.|. +++||++|.||.+|.|. ++
T Consensus 70 ~~g~~v~IG~~~~i~~~~~i~~~~~i~IG~~v~Ig~~v~I~~~~h~~~~~~~~~~~~~~~~v~IGd~v~IG~~~~I~~gv 149 (185)
T 2p2o_A 70 DYGYNIHVGENFFMNFDGVILDVCEVRIGDHCFIGPGVHIYTATHPLDPHERNSGLEYGKPVVIGHNVWIGGRAVINPGV 149 (185)
T ss_dssp SCSTTEEECTTEEECSSEEEECSSCEEECTTCEECTTCEEECEECCSSHHHHHTCCBEECCEEECSSCEECTTCEECTTC
T ss_pred EecCCEEECCeeEEcCCeEEEeccceEECCCcEEeCCCEEEcCCCcCChhhcccCccccCCeEEcCCeEECCCCEECCCC
Confidence 345566677777777776663 567888888888888883 35666666666666554 45
Q ss_pred EECCCCEECCCcEEe
Q 013012 399 VVMNHVTIGDGCSIQ 413 (451)
Q Consensus 399 ~i~~~~~Ig~~~~i~ 413 (451)
+|++++.||+++.|.
T Consensus 150 ~IG~~~vIgagsvV~ 164 (185)
T 2p2o_A 150 TIGDNAVIASGAVVT 164 (185)
T ss_dssp EECTTCEECTTCEEC
T ss_pred EECCCCEECCCCEEC
Confidence 555555555555554
No 159
>1ocx_A Maltose O-acetyltransferase; LEFT-handed parallel beta-helix; 2.15A {Escherichia coli} SCOP: b.81.1.3
Probab=98.79 E-value=4.8e-08 Score=84.99 Aligned_cols=71 Identities=11% Similarity=0.165 Sum_probs=41.8
Q ss_pred CCCceeCCCCeeCCCcEEC--CCCEECCCCEECCCCEEe-------------------ceEECCCCEECCCcEEe-ceEE
Q 013012 343 AQNNIIHPSAELGSKTTVG--PHCMLGEGSQMGDKCSVK-------------------RSVIGRHCRIGSNVKVV-NSVV 400 (451)
Q Consensus 343 ~~~~~i~~~~~i~~~~~i~--~~~~i~~~~~i~~~~~i~-------------------~svig~~~~ig~~~~i~-~s~i 400 (451)
+.+..|++++.|++++.|. .++.||++|.|+++|.|. +++||++|.||.+|.|. ++.|
T Consensus 70 g~~v~IG~~~~I~~~~~i~~~~~i~IG~~v~Ig~~v~I~~~~h~~~~~~~~~~~~~~~~v~IG~~v~Ig~~a~I~~gv~I 149 (182)
T 1ocx_A 70 GYNIFLGNNFFANFDCVMLDVCPIRIGDNCMLAPGVHIYTATHPIDPVARNSGAELGKPVTIGNNVWIGGRAVINPGVTI 149 (182)
T ss_dssp STTEEECSSEEECSSEEEECSSCEEECTTCEECTTCEEECEECCSSHHHHTTTCBEECCEEECTTCEECTTCEECTTCEE
T ss_pred CCCEEECCCcEEeCCeEEEeccceEEcCCcEEeCCcEEEeCCCccChhhcccCccccCCeEEeCCeEECCCCEECCCcEE
Confidence 4455666666666666663 456777777777777773 35555555555555553 4455
Q ss_pred CCCCEECCCcEEe
Q 013012 401 MNHVTIGDGCSIQ 413 (451)
Q Consensus 401 ~~~~~Ig~~~~i~ 413 (451)
++++.||.++.|.
T Consensus 150 G~~~vIgagsvV~ 162 (182)
T 1ocx_A 150 GDNVVVASGAVVT 162 (182)
T ss_dssp CTTCEECTTCEEC
T ss_pred CCCCEECCCCEEC
Confidence 5555555544444
No 160
>3eev_A Chloramphenicol acetyltransferase; beta-helix, structural genomics, center for STR genomics of infectious diseases, csgid; 2.61A {Vibrio cholerae o1 biovar el tor} SCOP: b.81.1.3
Probab=98.70 E-value=3.9e-08 Score=88.02 Aligned_cols=44 Identities=20% Similarity=0.234 Sum_probs=27.3
Q ss_pred ceEECCCCEECCCcEEe-CeEECCCCEECCCcEEcceEECCCCEEC
Q 013012 397 NSVVMNHVTIGDGCSIQ-GSVICSNAQLQERVALKDCQVLSLSTSV 441 (451)
Q Consensus 397 ~s~i~~~~~Ig~~~~i~-~~ii~~~~~i~~~~~i~~~~ig~~~~i~ 441 (451)
+++|+++|.||.+|.|. ++.||++|+|+++++|... |.+++++.
T Consensus 111 ~v~IG~~v~IG~~a~I~~gv~IG~~~iIgagsvV~~d-Vp~~~vv~ 155 (212)
T 3eev_A 111 DTIIGHDVWIGTEAMIMPGVKIGHGAIIASRSVVTKD-VAPYEVVG 155 (212)
T ss_dssp CEEECSSCEECTTCEECTTCEECTTCEECTTCEECSC-BCTTEEEE
T ss_pred CeEECCCCEECCCCEEcCCCEECCCCEECCCCEEccc-cCCCcEEE
Confidence 46666777777776663 6666777777777766632 45555443
No 161
>4e8l_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); 2.70A {Staphylococcus aureus}
Probab=98.69 E-value=3.8e-08 Score=88.11 Aligned_cols=26 Identities=23% Similarity=0.457 Sum_probs=14.1
Q ss_pred CEECCCCEEe-ceEECCCCEECCCcEE
Q 013012 370 SQMGDKCSVK-RSVIGRHCRIGSNVKV 395 (451)
Q Consensus 370 ~~i~~~~~i~-~svig~~~~ig~~~~i 395 (451)
+.+...+.+. +.+||++|.|+++++|
T Consensus 54 ~vi~~~~~i~~~v~IG~~~~I~~gv~I 80 (219)
T 4e8l_A 54 QVLYHYEVIGDKLIIGRFCSIGPGTTF 80 (219)
T ss_dssp GEESCCTTTCCCEEECSSCEECTTCEE
T ss_pred eEEeecceeCCCEEECCCCEEcCCCEE
Confidence 3444443333 3566666666666666
No 162
>3eev_A Chloramphenicol acetyltransferase; beta-helix, structural genomics, center for STR genomics of infectious diseases, csgid; 2.61A {Vibrio cholerae o1 biovar el tor} SCOP: b.81.1.3
Probab=98.63 E-value=1.1e-07 Score=85.13 Aligned_cols=13 Identities=54% Similarity=0.938 Sum_probs=5.4
Q ss_pred EECCCCEECCCcE
Q 013012 382 VIGRHCRIGSNVK 394 (451)
Q Consensus 382 vig~~~~ig~~~~ 394 (451)
.||++|.|+++|+
T Consensus 60 ~IG~~~~I~~~v~ 72 (212)
T 3eev_A 60 VIGSFCSIGSGAV 72 (212)
T ss_dssp EECSSCEECTTCE
T ss_pred EECCCCEECCCCE
Confidence 3444444444443
No 163
>1mr7_A Streptogramin A acetyltransferase; LEFT-handed parallel beta-helix domain; 1.80A {Enterococcus faecium} SCOP: b.81.1.3 PDB: 1khr_A* 1kk5_A 1kk4_A 1kk6_A 1mr9_A* 1mrl_A* 3dho_A*
Probab=98.57 E-value=3e-08 Score=88.24 Aligned_cols=43 Identities=19% Similarity=0.235 Sum_probs=25.1
Q ss_pred ceEECCCCEECCCcEEe-CeEECCCCEECCCcEEcceEECCCCEE
Q 013012 397 NSVVMNHVTIGDGCSIQ-GSVICSNAQLQERVALKDCQVLSLSTS 440 (451)
Q Consensus 397 ~s~i~~~~~Ig~~~~i~-~~ii~~~~~i~~~~~i~~~~ig~~~~i 440 (451)
+++|+++|.||.++.|. ++.||++++|++++.|... |.+++++
T Consensus 113 ~v~Ig~~v~IG~~a~I~~gv~Ig~~~~Igags~V~~~-v~~~~i~ 156 (209)
T 1mr7_A 113 DTIIGNDVWIGKDVVIMPGVKIGDGAIVAANSVVVKD-IAPYMLA 156 (209)
T ss_dssp CEEECSSCEECTTCEECTTCEECTTCEECTTCEECSC-BCTTEEE
T ss_pred CcEECCCCEEcCCCEEcCCCEECCCCEEcCCCEEcCC-CCCCeEE
Confidence 45666666666666663 5666666666666666532 3444443
No 164
>1xat_A Xenobiotic acetyltransferase; chloramphenicol, LEFT-handed helix; 3.20A {Pseudomonas aeruginosa} SCOP: b.81.1.3 PDB: 2xat_A*
Probab=98.48 E-value=3e-07 Score=81.84 Aligned_cols=33 Identities=18% Similarity=0.266 Sum_probs=14.8
Q ss_pred eEECCCCEECCCcEEe-CeEECCCCEECCCcEEc
Q 013012 398 SVVMNHVTIGDGCSIQ-GSVICSNAQLQERVALK 430 (451)
Q Consensus 398 s~i~~~~~Ig~~~~i~-~~ii~~~~~i~~~~~i~ 430 (451)
++|+++|.||.+|.|. ++.||++++|+++++|.
T Consensus 111 v~IG~~v~IG~~a~I~~gv~Ig~~~~IgagsvV~ 144 (212)
T 1xat_A 111 TLIGHEVWIGTEAMFMPGVRVGHGAIIGSRALVT 144 (212)
T ss_dssp EEECTTCEECTTCEECTTCEECTTCEECTTCEEC
T ss_pred eEECCCCEECCCCEEeCCCEECCCCEECCCCEEc
Confidence 4444444444444442 44444444444444443
No 165
>4e8l_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); 2.70A {Staphylococcus aureus}
Probab=98.36 E-value=1.2e-06 Score=78.37 Aligned_cols=45 Identities=22% Similarity=0.186 Sum_probs=32.0
Q ss_pred eceEECCCCEECCCcEEe-CeEECCCCEECCCcEEcceEECCCCEEC
Q 013012 396 VNSVVMNHVTIGDGCSIQ-GSVICSNAQLQERVALKDCQVLSLSTSV 441 (451)
Q Consensus 396 ~~s~i~~~~~Ig~~~~i~-~~ii~~~~~i~~~~~i~~~~ig~~~~i~ 441 (451)
++++|+++|.||.++.|. ++.||++++|+++++|... |.+++++.
T Consensus 117 g~v~Igd~v~IG~~a~I~~gv~IG~~~~IgagsvV~~d-v~~~~~~~ 162 (219)
T 4e8l_A 117 GDIEIGNDVWIGRDVTIMPGVKIGDGAIIAAEAVVTKN-VAPYSIVG 162 (219)
T ss_dssp CCEEECSSCEECTTCEECTTCEECTTCEECTTCEECSC-BCTTEEEE
T ss_pred CCcEECCCeEECCCCEEcCCCEECCCCEECCCCEEccc-CCCCeEEE
Confidence 367888888888888774 6778888888888877642 45555543
No 166
>1mr7_A Streptogramin A acetyltransferase; LEFT-handed parallel beta-helix domain; 1.80A {Enterococcus faecium} SCOP: b.81.1.3 PDB: 1khr_A* 1kk5_A 1kk4_A 1kk6_A 1mr9_A* 1mrl_A* 3dho_A*
Probab=98.27 E-value=1.1e-06 Score=78.17 Aligned_cols=32 Identities=9% Similarity=0.101 Sum_probs=19.2
Q ss_pred CeEECCCCEECCCcEEc-ceEECCCCEECCCCc
Q 013012 414 GSVICSNAQLQERVALK-DCQVLSLSTSVFLSL 445 (451)
Q Consensus 414 ~~ii~~~~~i~~~~~i~-~~~ig~~~~i~~~~~ 445 (451)
+++||+++.||.++.|. ++.||++++|++++.
T Consensus 113 ~v~Ig~~v~IG~~a~I~~gv~Ig~~~~Igags~ 145 (209)
T 1mr7_A 113 DTIIGNDVWIGKDVVIMPGVKIGDGAIVAANSV 145 (209)
T ss_dssp CEEECSSCEECTTCEECTTCEECTTCEECTTCE
T ss_pred CcEECCCCEEcCCCEEcCCCEECCCCEEcCCCE
Confidence 45566666666666665 366666666666553
No 167
>1xat_A Xenobiotic acetyltransferase; chloramphenicol, LEFT-handed helix; 3.20A {Pseudomonas aeruginosa} SCOP: b.81.1.3 PDB: 2xat_A*
Probab=98.10 E-value=1.7e-05 Score=70.47 Aligned_cols=68 Identities=16% Similarity=0.180 Sum_probs=38.6
Q ss_pred eceEECCCCEECCCcEEe--ce--EECC---------------CCEECCCcEEe-CeEECCCCEECCCcEEc-ceEECCC
Q 013012 379 KRSVIGRHCRIGSNVKVV--NS--VVMN---------------HVTIGDGCSIQ-GSVICSNAQLQERVALK-DCQVLSL 437 (451)
Q Consensus 379 ~~svig~~~~ig~~~~i~--~s--~i~~---------------~~~Ig~~~~i~-~~ii~~~~~i~~~~~i~-~~~ig~~ 437 (451)
.+.+||++|.|+++|+|. +. ...+ .+.+++++.+. .++||++|.||.++.|. +++||+|
T Consensus 55 ~~i~IG~~~~Ig~~v~i~~~g~~~h~~~~~s~~p~~~~~~~~~~~~i~~~~~~~~~v~IG~~v~IG~~a~I~~gv~Ig~~ 134 (212)
T 1xat_A 55 DKLVIGSFCSIGSGAAFIMAGNQGHRAEWASTFPFHFMHEEPAFAGAVNGYQPAGDTLIGHEVWIGTEAMFMPGVRVGHG 134 (212)
T ss_dssp CCEEECSSCEECTTCEEECSTTTTCCTTSSCCSCGGGCCSCGGGGGCCCCCCCCCCEEECTTCEECTTCEECTTCEECTT
T ss_pred cCEEEcCCCEECCCCEEEeCCCCccccccccccceeeecccccccccccCceecCCeEECCCCEECCCCEEeCCCEECCC
Confidence 345777777777777662 11 1111 12333444443 46666777777777666 4666666
Q ss_pred CEECCCCcc
Q 013012 438 STSVFLSLS 446 (451)
Q Consensus 438 ~~i~~~~~~ 446 (451)
++|++++..
T Consensus 135 ~~IgagsvV 143 (212)
T 1xat_A 135 AIIGSRALV 143 (212)
T ss_dssp CEECTTCEE
T ss_pred CEECCCCEE
Confidence 666666643
No 168
>2i5e_A Hypothetical protein MM_2497; APC86122, methanosarcina mazei GO1, hypothetic protein, STRU genomics, PSI-2, protein structure initiative; 2.10A {Methanosarcina mazei} SCOP: c.68.1.21
Probab=97.81 E-value=2e-05 Score=70.14 Aligned_cols=104 Identities=17% Similarity=0.176 Sum_probs=75.0
Q ss_pred CceEEEEe--cCCCCCCCCCCCCCCcccccccCCcchHHHHHHHHHHCCCcEE-EEEecCchhhHHHHHhhhhhccCcee
Q 013012 2 DFQVVVLA--GGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDL-IVVVEGADAALRVGGWISAAYVDRLH 78 (451)
Q Consensus 2 ~~~avIlA--gG~g~Rl~pl~~~~~pK~llpv~gkpli~~~l~~l~~~gi~~i-ivv~~~~~~~~~i~~~~~~~~~~~~~ 78 (451)
+|.+||++ |...|||.|. .........++|||+|+++.+..++++.+ ++++++.. ...+ ++
T Consensus 3 ~~~~vip~k~g~~KtRL~~~----l~~~~~~~l~~~ll~~vl~~l~~~~~~~v~vvv~~~~~----~~~~--------~~ 66 (211)
T 2i5e_A 3 AMRAVIPYKKAGAKSRLSPV----LSLQEREEFVELMLNQVISSLKGAGIEQVDILSPSVYG----LEEM--------TE 66 (211)
T ss_dssp CCEEEEECCCTTTTGGGTTT----SCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEESSCTT----CSSC--------CS
T ss_pred ceEEEEEeCCCCCccccCcc----CCHHHHHHHHHHHHHHHHHHHHHcCCceEEEEEcCcHH----HHhh--------cC
Confidence 37899999 7777888322 22333336679999999999999988888 88876431 1111 23
Q ss_pred eEEEEcCCCCChHHHHHHHHhcCCCCcEEEEcCC--ccCCCCchHHHH
Q 013012 79 VEVATVPEDVGTAGALRAIAHHLTAKDVLVVSGD--LVSDVPPGAVTA 124 (451)
Q Consensus 79 ~~i~~~~~~~gt~~~l~~~~~~l~~~~~lvl~~D--~i~~~~~~~~l~ 124 (451)
+.++.++ .|.+++++.+.+.+ .+.++++.|| ++....+..+++
T Consensus 67 ~~~v~~~--~gl~~sl~~a~~~~-~~~vlvi~~D~P~l~~~~i~~l~~ 111 (211)
T 2i5e_A 67 ARVLLDE--KDLNEALNRYLKEA-EEPVLIVMADLPLLSPEHIKEISS 111 (211)
T ss_dssp SEEEECC--SCHHHHHHHHHHHC-CSCEEEECSCCTTCCHHHHHHHTT
T ss_pred CEEEECC--CCHHHHHHHHHHhc-CCCEEEEcCCcCCCCHHHHHHHHc
Confidence 5666554 88999999998776 5789999999 666667777765
No 169
>3r3i_A UTP--glucose-1-phosphate uridylyltransferase; rossmann fold, beta barrel, nucleotidyltransferase; 3.57A {Homo sapiens} PDB: 3r2w_A
Probab=97.48 E-value=0.0032 Score=62.51 Aligned_cols=66 Identities=21% Similarity=0.247 Sum_probs=50.5
Q ss_pred CceEEEEecCCCCCCCCCCCCCCcccccccC-CcchHHHHHHHHHHC----C-CcEEEEEecCchhhHHHHHhhhhh
Q 013012 2 DFQVVVLAGGTSKKLVPLVSKEVPKALLPVA-NRPVLSYVLEQLELS----N-IKDLIVVVEGADAALRVGGWISAA 72 (451)
Q Consensus 2 ~~~avIlAgG~g~Rl~pl~~~~~pK~llpv~-gkpli~~~l~~l~~~----g-i~~iivv~~~~~~~~~i~~~~~~~ 72 (451)
++.+|+||||.|||| +...||.++|+. |+++++..++++... | .-.++|.++... .+.+.+++.++
T Consensus 127 kvavvlLaGGlGTRL----G~~~PK~~i~V~sgktflql~~eqI~~l~~~~g~~IPl~IMTS~~T-~~~T~~~f~k~ 198 (528)
T 3r3i_A 127 KLVVVKLNGGLGTSM----GCKGPKSLIGVRNENTFLDLTVQQIEHLNKTYNTDVPLVLMNSFNT-DEDTKKILQKY 198 (528)
T ss_dssp TEEEEEECCCBCTTT----TCSSBGGGSEEETTEEHHHHHHHHHHHHHHHHTCCCCEEEEECTTT-HHHHHSSCGGG
T ss_pred ceEEEEeCCCCcccc----CCCCCccceecCCCCcHHHHHHHHHHHHHHHhCCCCCEEEEeccch-hHHHHHHHHhc
Confidence 357899999999999 788999999996 889999999998664 3 234666666443 34666776653
No 170
>3gue_A UTP-glucose-1-phosphate uridylyltransferase 2; phosphatase, UDP, structural GE structural genomics consortium, SGC; HET: UPG PG4; 1.92A {Trypanosoma brucei}
Probab=97.01 E-value=0.011 Score=58.09 Aligned_cols=134 Identities=14% Similarity=0.117 Sum_probs=84.3
Q ss_pred CceEEEEecCCCCCCCCCCCCCCccccccc-CCcchHHHHHHHHHHC----C-CcEEEEEecCchhhHHHHHhhhhh--c
Q 013012 2 DFQVVVLAGGTSKKLVPLVSKEVPKALLPV-ANRPVLSYVLEQLELS----N-IKDLIVVVEGADAALRVGGWISAA--Y 73 (451)
Q Consensus 2 ~~~avIlAgG~g~Rl~pl~~~~~pK~llpv-~gkpli~~~l~~l~~~----g-i~~iivv~~~~~~~~~i~~~~~~~--~ 73 (451)
++-+|+||||.|||| +...||.++|+ .|+++++..++++... + .-.++|.++... .+.+.+++.++ +
T Consensus 76 kvavvlLaGGlGTRL----G~~~pKg~~~v~sgksflql~~eqI~~l~~~~~~~iPl~IMTS~~T-~~~T~~~~~k~~~F 150 (484)
T 3gue_A 76 QAVVLKLNGGLGTGM----GLNGPKSLLQVKNGQTFLDFTALQLEHFRQVRNCNVPFMLMNSFST-SGETKNFLRKYPTL 150 (484)
T ss_dssp TEEEEEEECCCCGGG----TCSSCGGGSEEETTEEHHHHHHHHHHHHHHHHTCCCCEEEEECTTT-HHHHHHHGGGCHHH
T ss_pred hcEEEEEcCCccccc----CCCCCceeeecCCCCcHHHHHHHHHHHHHHHcCCCceEEEECCcch-hHHHHHHHHhCccc
Confidence 356899999999999 77899999999 6789999999988652 2 234677777543 34666666542 1
Q ss_pred c-CceeeEEEEc----------------CC-------CCChHHHHHHH-----HhcC---CCCcEEEEcCCccCCCCchH
Q 013012 74 V-DRLHVEVATV----------------PE-------DVGTAGALRAI-----AHHL---TAKDVLVVSGDLVSDVPPGA 121 (451)
Q Consensus 74 ~-~~~~~~i~~~----------------~~-------~~gt~~~l~~~-----~~~l---~~~~~lvl~~D~i~~~~~~~ 121 (451)
. ..-.+.+..| +. +.|.++..... ++.+ .-+++.+.+.|.+....=..
T Consensus 151 gl~~~~v~~F~Q~~~P~i~~dg~~~i~~~~~~~i~~~P~GhGdiy~aL~~sGiLd~l~~~Gieyi~v~~vDNL~a~~Dp~ 230 (484)
T 3gue_A 151 YEVFDSDIELMQNRVPKIRQDNFFPVTYEADPTCEWVPPGHGDVYTVLYSSGKLDYLLGKGYRYMFISNGDNLGATLDVR 230 (484)
T ss_dssp HTTCCCCCEEECCCEECEETTTCCBCCCTTCGGGGEECCCGGGHHHHHHHHSHHHHHHHTTCCEEEEEETTCTTCCCCHH
T ss_pred CCCccceEEEEeCceeeEecCCCceeecCCCCceeeccCCchHHHHHHHhCCcHHHHHHcCCEEEEEEcCCCcccccCHH
Confidence 1 1101111111 00 23444322221 2222 24678888999655543356
Q ss_pred HHHHHHhcCceEEEEEeee
Q 013012 122 VTAAHRRHDAVVTAMICSV 140 (451)
Q Consensus 122 ~l~~~~~~~~~~t~~~~~~ 140 (451)
++.++.++++++.+-+.+.
T Consensus 231 ~lG~~~~~~~d~~~kvv~K 249 (484)
T 3gue_A 231 LLDYMHEKQLGFLMEVCRR 249 (484)
T ss_dssp HHHHHHHTTCSEEEEEEEC
T ss_pred HHHHHHhcCCCEEEEEEEC
Confidence 8888888999887776654
No 171
>3ogz_A UDP-sugar pyrophosphorylase; LEFT handed beta helix, rossmann fold, UDP sugar pyrophospho transferase; 2.03A {Leishmania major} PDB: 3oh3_A* 3oh1_A* 3oh0_A* 3oh2_A* 3oh4_A*
Probab=96.73 E-value=0.0047 Score=62.49 Aligned_cols=132 Identities=14% Similarity=0.143 Sum_probs=83.5
Q ss_pred ceEEEEecCCCCCCCCCCCCCCcccccccC---CcchHHHHHHHHHHC-C-CcEEEEEecCchhhHHHHHhhhhhccCce
Q 013012 3 FQVVVLAGGTSKKLVPLVSKEVPKALLPVA---NRPVLSYVLEQLELS-N-IKDLIVVVEGADAALRVGGWISAAYVDRL 77 (451)
Q Consensus 3 ~~avIlAgG~g~Rl~pl~~~~~pK~llpv~---gkpli~~~l~~l~~~-g-i~~iivv~~~~~~~~~i~~~~~~~~~~~~ 77 (451)
+.+|+||||.|+|| +...||.++|++ |++++++.++++.+. | .-.++|.++... .+.+.+++.+.-+.+.
T Consensus 115 vavvllaGGlGTRL----G~~~pK~~lpv~~~s~ks~lql~~e~i~~~~g~~iPl~IMTS~~T-~~~T~~~~~~fgl~~~ 189 (630)
T 3ogz_A 115 TVFVLVAGGLGERL----GYSSIKVSLPVETATNTTYLAYYLRWAQRVGGKEVPFVIMTSDDT-HDRTLQLLRELQLEVP 189 (630)
T ss_dssp EEEEEECCCEEGGG----TEEEEGGGSBSCTTTCCBHHHHHHHHHHHHHCTTCCEEEEECTTT-HHHHHHHHHHTTCCCT
T ss_pred ceEEEecCCccccc----CCCCCcccceecCCCCCcHHHHHHHHHHHHhCCCCcEEEEecccc-hHHHHHHHHHhCCCcc
Confidence 56899999999999 778999999997 999999999999752 3 234677776543 3467777766322222
Q ss_pred eeEEEEcC----------------C------CCChHHHHHHH-----------------------HhcC---CCCcEEEE
Q 013012 78 HVEVATVP----------------E------DVGTAGALRAI-----------------------AHHL---TAKDVLVV 109 (451)
Q Consensus 78 ~~~i~~~~----------------~------~~gt~~~l~~~-----------------------~~~l---~~~~~lvl 109 (451)
++.+..|. . +.|.++..... ++.+ .-+++.+.
T Consensus 190 ~V~~F~Q~~~P~i~~~~g~l~l~~~~~i~~~P~GhGdv~~aL~~sG~~~~~~~~~~~~~~~~~~lLd~l~~~Gieyi~v~ 269 (630)
T 3ogz_A 190 NLHVLKQGQVFCFADSAAHLALDETGKLLRKPHGHGDVHSLIYNATVKRDVVPDSGDGTATAQPLVNDWLAAGYESIVFI 269 (630)
T ss_dssp TEEEEECCCEECBSSTTCCBCBCTTSSBCEECCCTTHHHHHHHHCBC--------------CCBHHHHHHHTTCCEEEEE
T ss_pred cEEEEEcCCEEEEecCCCceeecCCCcccCCCCCCHHHHHHHHHcCCCcccccccccccccHHHHHHHHHHcCCEEEEEE
Confidence 23332221 0 23444322221 1211 23567777
Q ss_pred cCCc-cCCCCchHHHHHHHhcCceEEEEEee
Q 013012 110 SGDL-VSDVPPGAVTAAHRRHDAVVTAMICS 139 (451)
Q Consensus 110 ~~D~-i~~~~~~~~l~~~~~~~~~~t~~~~~ 139 (451)
+.|. +....-..++..+.++++++.+-+.+
T Consensus 270 ~vDN~L~~~~DP~~lG~~~~~~~d~~~kvv~ 300 (630)
T 3ogz_A 270 QDTNAGATITIPISLALSAEHSLDMNFTCIP 300 (630)
T ss_dssp CTTBTTHHHHHHHHHHHHHHTTCSEEEEEEC
T ss_pred ccCCccccccCHHHhHHHHhcCCCEEEEEEE
Confidence 8885 33333344778888888888776654
No 172
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=90.38 E-value=1.6 Score=38.70 Aligned_cols=93 Identities=8% Similarity=0.014 Sum_probs=60.7
Q ss_pred cchHHHHHHHHHHCCCc--EEEEEecCchhhHHHHHhhhhhccCceeeEEEEcC--------CCCChHHHHHHHHhcCCC
Q 013012 34 RPVLSYVLEQLELSNIK--DLIVVVEGADAALRVGGWISAAYVDRLHVEVATVP--------EDVGTAGALRAIAHHLTA 103 (451)
Q Consensus 34 kpli~~~l~~l~~~gi~--~iivv~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~--------~~~gt~~~l~~~~~~l~~ 103 (451)
...|..+|+.+.+.... +++|+-..- .+...+.+.++.. ..++.++..+ ...|.+.+.-.+++....
T Consensus 13 ~~~l~~~l~Sl~~q~~~~~eiivvDd~S--~d~t~~~~~~~~~-~~~i~~i~~~~~~~~~~~~n~G~~~a~N~gi~~a~g 89 (255)
T 1qg8_A 13 SDYVAKSISSILSQTFSDFELFIMDDNS--NEETLNVIRPFLN-DNRVRFYQSDISGVKERTEKTRYAALINQAIEMAEG 89 (255)
T ss_dssp TTTHHHHHHHHHTCSCCCEEEEEEECSC--CHHHHHHHGGGGG-STTEEEEECCCCSHHHHHSSCHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHHhccCCceEEEEEECCC--CchHHHHHHHHhh-cCCEEEEecccccccccccccCHHHHHHHHHHHcCC
Confidence 47889999999876543 455554322 1222333333211 2346777666 578888888888888777
Q ss_pred CcEEEEcCC-ccCCCCchHHHHHHHhc
Q 013012 104 KDVLVVSGD-LVSDVPPGAVTAAHRRH 129 (451)
Q Consensus 104 ~~~lvl~~D-~i~~~~~~~~l~~~~~~ 129 (451)
+.++++.+| .+.+..+..+++...+.
T Consensus 90 ~~i~~lD~Dd~~~~~~l~~~~~~~~~~ 116 (255)
T 1qg8_A 90 EYITYATDDNIYMPDRLLKMVRELDTH 116 (255)
T ss_dssp SEEEEEETTEEECTTHHHHHHHHHHHC
T ss_pred CEEEEeCCCCccChHHHHHHHHHHHhC
Confidence 778999999 55555678888877765
No 173
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=90.22 E-value=0.83 Score=40.21 Aligned_cols=102 Identities=13% Similarity=0.143 Sum_probs=64.0
Q ss_pred cccCC-cchHHHHHHHHHHCCCc--EEEEEecCc-h-hhHHHHHhhhhhccCceeeEEEEcCCCCChHHHHHHHHhcCCC
Q 013012 29 LPVAN-RPVLSYVLEQLELSNIK--DLIVVVEGA-D-AALRVGGWISAAYVDRLHVEVATVPEDVGTAGALRAIAHHLTA 103 (451)
Q Consensus 29 lpv~g-kpli~~~l~~l~~~gi~--~iivv~~~~-~-~~~~i~~~~~~~~~~~~~~~i~~~~~~~gt~~~l~~~~~~l~~ 103 (451)
+|.-| ...|..+|+.+.+.... +++|+-..- + ..+.++++..+. ..+.++. .+..|.+.+.-.+++....
T Consensus 11 Ip~yn~~~~l~~~l~Sl~~q~~~~~eiIvvDd~S~d~t~~~~~~~~~~~----~~i~~i~-~~n~G~~~a~N~g~~~a~g 85 (240)
T 3bcv_A 11 VPIYNVEKYLDQCVQALLAQTLSDIEIILIDDESPDNCPKICDDYAAQY----PNIKVIH-KKNAGLGMACNSGLDVATG 85 (240)
T ss_dssp EEESSCTTTHHHHHHHHHTCSSSSEEEEEEECCCSSSHHHHHHHHHHHC----SSEEEEE-CCCCCHHHHHHHHHHHCCS
T ss_pred EecCCCHHHHHHHHHHHHhCcCCCeEEEEEECCCCcCHHHHHHHHHhhC----CCEEEEE-CCCCChHHHHHHHHHHcCC
Confidence 34434 47899999999876443 555554321 1 122333433221 1356654 4578999999888888877
Q ss_pred CcEEEEcCC-ccCCCCchHHHHHHHhcCceEEE
Q 013012 104 KDVLVVSGD-LVSDVPPGAVTAAHRRHDAVVTA 135 (451)
Q Consensus 104 ~~~lvl~~D-~i~~~~~~~~l~~~~~~~~~~t~ 135 (451)
+.++++..| .+.+..++.+++...+.+.++.+
T Consensus 86 ~~i~~lD~Dd~~~~~~l~~l~~~~~~~~~~~v~ 118 (240)
T 3bcv_A 86 EYVAFCDSDDYVDSDMYMTMYNVAQKYTCDAVF 118 (240)
T ss_dssp SEEEECCTTCCCCTTHHHHHHHHHHHHTCSEEE
T ss_pred CEEEEECCCCcCCHHHHHHHHHHHHhcCCCEEE
Confidence 778888899 55555678888887765555543
No 174
>3cgx_A Putative nucleotide-diphospho-sugar transferase; YP_389115.1, joint center for structural genomics; 1.90A {Desulfovibrio desulfuricans subsp}
Probab=87.61 E-value=1.2 Score=39.93 Aligned_cols=87 Identities=13% Similarity=0.119 Sum_probs=57.8
Q ss_pred cchHHHHHHHHHHCCCcEEEEEecCchhhHHH--HHhhhhhccCceeeEEEEcCCCCChHHHHHHHHhcC---CCCcEEE
Q 013012 34 RPVLSYVLEQLELSNIKDLIVVVEGADAALRV--GGWISAAYVDRLHVEVATVPEDVGTAGALRAIAHHL---TAKDVLV 108 (451)
Q Consensus 34 kpli~~~l~~l~~~gi~~iivv~~~~~~~~~i--~~~~~~~~~~~~~~~i~~~~~~~gt~~~l~~~~~~l---~~~~~lv 108 (451)
++|+.++++.+...+...++++.+... ...+ ..+.. ..+.+.. ....|.+.+++.+...+ ..+.+++
T Consensus 37 ~~ll~~tl~~~~~~~~~~vvvvt~~~~-~~~~~~~~~~~------~~~~~~~-q~~~gLg~rl~~a~~~~~~~~~~~vli 108 (242)
T 3cgx_A 37 RHFVQDMLQGLARLHADLHICYVPGDA-DLPEKFKAWLG------PQHMFAA-QQGLDLGERMKHAMQKAFDDGYDRVVL 108 (242)
T ss_dssp HHHHHHHHHHHTTSSSEEEEEECCCCT-THHHHHHHHHC------TTSEEEE-CCSSSHHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHHHhCCCCEEEEEcCCch-hhhhhhhhhcc------CCcEEec-CCCCCHHHHHHHHHHHHHhCCCCeEEE
Confidence 599999999999888776666654322 2112 33331 1233332 34578889998886654 2356999
Q ss_pred EcCC--ccCCCCchHHHHHHHh
Q 013012 109 VSGD--LVSDVPPGAVTAAHRR 128 (451)
Q Consensus 109 l~~D--~i~~~~~~~~l~~~~~ 128 (451)
+.+| .+...++..+++...+
T Consensus 109 igaD~P~L~~~~l~~a~~~l~~ 130 (242)
T 3cgx_A 109 MGSDIPDYPCELVQKALNDLQH 130 (242)
T ss_dssp ECSSCTTCCHHHHHHHHHHTTT
T ss_pred EcCCCCCCCHHHHHHHHHHhcc
Confidence 9999 7778888888876554
No 175
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=86.58 E-value=3.5 Score=40.64 Aligned_cols=102 Identities=10% Similarity=0.087 Sum_probs=67.9
Q ss_pred cccCCc--chHHHHHHHHHHCCC----cEEEEEecCch---hhHHHHHhhhhhccCceeeEEEEcCCCCChHHHHHHHHh
Q 013012 29 LPVANR--PVLSYVLEQLELSNI----KDLIVVVEGAD---AALRVGGWISAAYVDRLHVEVATVPEDVGTAGALRAIAH 99 (451)
Q Consensus 29 lpv~gk--pli~~~l~~l~~~gi----~~iivv~~~~~---~~~~i~~~~~~~~~~~~~~~i~~~~~~~gt~~~l~~~~~ 99 (451)
+|.-|. ..|..+|+.+.+... .+|+||-..-. ..+.++++..+. ...+.++..+...|.+.+...+++
T Consensus 35 Ip~yN~~~~~l~~~l~Sl~~q~~~~~~~EIIvVDd~S~d~~t~~~l~~~~~~~---~~~v~vi~~~~n~G~~~a~N~g~~ 111 (472)
T 1xhb_A 35 IVFHNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLESYVKKL---KVPVHVIRMEQRSGLIRARLKGAA 111 (472)
T ss_dssp EEESSCCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHHHHHHHSS---SSCEEEEECSSCCCHHHHHHHHHH
T ss_pred EEeCCCCHHHHHHHHHHHHhcCcHhHceEEEEEECCCCcHHHHHHHHHHHHHC---CCcEEEEECCCCCChHHHHHHHHH
Confidence 454554 589999999987643 26776653221 122344433221 113777777778999999988888
Q ss_pred cCCCCcEEEEcCC-ccCCCCchHHHHHHHhcCceE
Q 013012 100 HLTAKDVLVVSGD-LVSDVPPGAVTAAHRRHDAVV 133 (451)
Q Consensus 100 ~l~~~~~lvl~~D-~i~~~~~~~~l~~~~~~~~~~ 133 (451)
....+.++++..| .+.+..+..+++...+....+
T Consensus 112 ~A~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~~ 146 (472)
T 1xhb_A 112 VSRGQVITFLDAHCECTAGWLEPLLARIKHDRRTV 146 (472)
T ss_dssp HCCSSEEEEEESSEEECTTCHHHHHHHHHHCTTEE
T ss_pred hccCCeEEEECCCeEeCccHHHHHHHHHHhCCCEE
Confidence 8877778999999 556667888988887665443
No 176
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=83.07 E-value=4.4 Score=41.09 Aligned_cols=99 Identities=9% Similarity=0.041 Sum_probs=65.8
Q ss_pred cccCCc--chHHHHHHHHHHCCC-c---EEEEEecCc--hh-hHHHHHhhhhhccCceeeEEEEcCCCCChHHHHHHHHh
Q 013012 29 LPVANR--PVLSYVLEQLELSNI-K---DLIVVVEGA--DA-ALRVGGWISAAYVDRLHVEVATVPEDVGTAGALRAIAH 99 (451)
Q Consensus 29 lpv~gk--pli~~~l~~l~~~gi-~---~iivv~~~~--~~-~~~i~~~~~~~~~~~~~~~i~~~~~~~gt~~~l~~~~~ 99 (451)
+|.-|. ..|..+|+.+.+... . +|+||-..- .. .+.++++.... ..+.++..+...|.+.+...+++
T Consensus 118 Ip~yNe~~~~L~~~L~Sll~qt~~~~~~EIIVVDDgS~D~tl~~~l~~~~~~~----~~v~vi~~~~n~G~~~A~N~G~~ 193 (570)
T 2d7i_A 118 IPFHNEGWSSLLRTVHSVLNRSPPELVAEIVLVDDFSDREHLKKPLEDYMALF----PSVRILRTKKREGLIRTRMLGAS 193 (570)
T ss_dssp EEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCCCGGGTHHHHHHHTTS----TTEEEEECSSCCCHHHHHHHHHH
T ss_pred EEECCCCHHHHHHHHHHHHhcCCccCcEEEEEEECCCCcHHHHHHHHHHHHhC----CeEEEEECCCCCCHHHHHHHHHH
Confidence 455565 588899998876433 2 677765421 11 22334433321 24777777778999999988888
Q ss_pred cCCCCcEEEEcCC-ccCCCCchHHHHHHHhcCc
Q 013012 100 HLTAKDVLVVSGD-LVSDVPPGAVTAAHRRHDA 131 (451)
Q Consensus 100 ~l~~~~~lvl~~D-~i~~~~~~~~l~~~~~~~~ 131 (451)
....+.++++..| .+.+..+..+++...+...
T Consensus 194 ~A~gd~i~fLD~D~~~~p~~L~~ll~~l~~~~~ 226 (570)
T 2d7i_A 194 VATGDVITFLDSHCEANVNWLPPLLDRIARNRK 226 (570)
T ss_dssp HCCSSEEEECCSSEEECTTCSHHHHHHHHHCTT
T ss_pred hcCCCEEEEEcCCccccccHHHHHHHHHHhCCC
Confidence 8776778888899 5566678889888776543
No 177
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=77.00 E-value=8.9 Score=37.99 Aligned_cols=99 Identities=11% Similarity=0.019 Sum_probs=65.8
Q ss_pred cccCCc-c-hHHHHHHHHHHCCCc----EEEEEecCchhhHHHHHhhhhhccCceeeEEEEcCCCCChHHHHHHHHhcCC
Q 013012 29 LPVANR-P-VLSYVLEQLELSNIK----DLIVVVEGADAALRVGGWISAAYVDRLHVEVATVPEDVGTAGALRAIAHHLT 102 (451)
Q Consensus 29 lpv~gk-p-li~~~l~~l~~~gi~----~iivv~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~~~gt~~~l~~~~~~l~ 102 (451)
+|.-|. . .|..+|+.+.+.... +|+||-..-. ...+...+.. ...+.++..+...|.+.+...+++...
T Consensus 72 Ip~yN~~~~~L~~~l~Sl~~q~~~~~~~EIIvVDDgS~-D~t~~~~~~~----~~~v~vi~~~~n~G~~~A~N~G~~~A~ 146 (501)
T 2ffu_A 72 ITFHNEARSALLRTVVSVLKKSPPHLIKEIILVDDYSN-DPEDGALLGK----IEKVRVLRNDRREGLMRSRVRGADAAQ 146 (501)
T ss_dssp EEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCS-CTHHHHGGGG----BTTEEEEECSSCCHHHHHHHHHHHHCC
T ss_pred EEeCcCcHHHHHHHHHHHHhhCchhhceeEEEEECCCC-chHHHHHHhc----CCCEEEEECCCCcCHHHHHHHHHHhcC
Confidence 455565 4 899999998764332 6776643221 1122233322 124777776777899999988888887
Q ss_pred CCcEEEEcCC-ccCCCCchHHHHHHHhcCce
Q 013012 103 AKDVLVVSGD-LVSDVPPGAVTAAHRRHDAV 132 (451)
Q Consensus 103 ~~~~lvl~~D-~i~~~~~~~~l~~~~~~~~~ 132 (451)
.+.++++.+| .+.+..+..+++...+....
T Consensus 147 gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~ 177 (501)
T 2ffu_A 147 AKVLTFLDSHCECNEHWLEPLLERVAEDRTR 177 (501)
T ss_dssp SSEEEECCSSEEECTTCHHHHHHHHHHCTTE
T ss_pred CCEEEEECCCcccCccHHHHHHHHHHhCCCe
Confidence 6778888899 55666789999888776554
No 178
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=67.84 E-value=13 Score=37.97 Aligned_cols=96 Identities=11% Similarity=0.133 Sum_probs=59.9
Q ss_pred cccCC-cchHHHHHHHHHHCCCc--EEEEEecCc-h-hhHHHHHhhhhhccCceeeEEEEcCCCCChHHHHHHHHhcCCC
Q 013012 29 LPVAN-RPVLSYVLEQLELSNIK--DLIVVVEGA-D-AALRVGGWISAAYVDRLHVEVATVPEDVGTAGALRAIAHHLTA 103 (451)
Q Consensus 29 lpv~g-kpli~~~l~~l~~~gi~--~iivv~~~~-~-~~~~i~~~~~~~~~~~~~~~i~~~~~~~gt~~~l~~~~~~l~~ 103 (451)
+|.-| ...|..+|+.+...... +++|+-+.- + ..+.++++..+ ...+.++. ....|.+.+...+++....
T Consensus 381 i~~yn~~~~l~~~l~s~~~q~~~~~eiivvdd~S~d~t~~~~~~~~~~----~~~i~~~~-~~n~G~~~a~n~g~~~a~g 455 (625)
T 2z86_A 381 IPAYNCSKYIVRCVESALNQTITDLEVCICDDGSTDDTLRILQEHYAN----HPRVRFIS-QKNKGIGSASNTAVRLCRG 455 (625)
T ss_dssp EEESSCTTTHHHHHHHHHSSSCCSEEEEEEEESCSSSHHHHHHHHHTT----CTTEEEEE-ECCCCHHHHHHHHHHHCCS
T ss_pred EeCCCCHHHHHHHHHHHHhCcCCCeEEEEEECcCChhHHHHHHHHHhh----CCcEEEEe-CCCCCHHHHHHHHHHhcCC
Confidence 34444 58999999999765432 555554321 1 12233333221 12355554 5668999999888888766
Q ss_pred CcEEEEcCC-ccCCCCchHHHHHHHhc
Q 013012 104 KDVLVVSGD-LVSDVPPGAVTAAHRRH 129 (451)
Q Consensus 104 ~~~lvl~~D-~i~~~~~~~~l~~~~~~ 129 (451)
+.++++.+| .+.+..+..+++...+.
T Consensus 456 ~~i~~ld~D~~~~~~~l~~~~~~~~~~ 482 (625)
T 2z86_A 456 FYIGQLDSDDFLEPDAVELCLDEFRKD 482 (625)
T ss_dssp SEEEECCTTCEECTTHHHHHHHHHHHC
T ss_pred CEEEEECCCcccChhHHHHHHHHHHhC
Confidence 778888999 55555677788776544
No 179
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=58.91 E-value=51 Score=33.41 Aligned_cols=103 Identities=14% Similarity=0.091 Sum_probs=63.5
Q ss_pred ccccCCc-chHHHHHHHHHHCC---CcEEEEEecCchhhHHHHHhhhhhccCceeeEEEEcCCC-CChHHHHHHHHhcCC
Q 013012 28 LLPVANR-PVLSYVLEQLELSN---IKDLIVVVEGADAALRVGGWISAAYVDRLHVEVATVPED-VGTAGALRAIAHHLT 102 (451)
Q Consensus 28 llpv~gk-pli~~~l~~l~~~g---i~~iivv~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~~-~gt~~~l~~~~~~l~ 102 (451)
++|.-|. ..|..+|+.+.... --+|+|+-.... +...+.+.+. .....+.++..+.. .|.+.++-.+++...
T Consensus 98 iIp~~n~~~~l~~~l~sl~~q~~~~~~eiivvDd~s~--d~t~~~~~~~-~~~~~i~~i~~~~~~~g~~~a~N~g~~~a~ 174 (625)
T 2z86_A 98 VIPTYNRAKILAITLACLCNQKTIYDYEVIVADDGSK--ENIEEIVREF-ESLLNIKYVRQKDYGYQLCAVRNLGLRAAK 174 (625)
T ss_dssp EEEESSCHHHHHHHHHHHHTCCCSSCEEEEEEEESCS--SCHHHHHHTT-TTTSCEEEEEECCCSCCHHHHHHHHHHHCC
T ss_pred EEecCCcHHHHHHHHHHHHhhccCCCeEEEEEeCCCc--hhHHHHHHHh-hhcCCeEEEEeCCCCcchhHHHHHHHHhCC
Confidence 3555565 78999999998763 345666654221 1222333322 12234666655443 468888888888776
Q ss_pred CCcEEEEcCC-ccCCCCchHHHHHHHhcCceE
Q 013012 103 AKDVLVVSGD-LVSDVPPGAVTAAHRRHDAVV 133 (451)
Q Consensus 103 ~~~~lvl~~D-~i~~~~~~~~l~~~~~~~~~~ 133 (451)
.+.++++.+| .+.+..+..+++.+.+.....
T Consensus 175 g~~v~~lD~D~~~~~~~l~~~~~~~~~~~~~~ 206 (625)
T 2z86_A 175 YNYVAILDCDMAPNPLWVQSYMELLAVDDNVA 206 (625)
T ss_dssp SSEEEEECTTEEECTTHHHHHHHHHHHCTTEE
T ss_pred cCEEEEECCCCCCCHHHHHHHHHHHhcCCceE
Confidence 6778999999 445555777888776654443
No 180
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=47.11 E-value=32 Score=32.74 Aligned_cols=104 Identities=14% Similarity=0.127 Sum_probs=62.2
Q ss_pred ccccCCc-chHHHHHHHHHH----C-CCcEEEEEecCchhhHHHHHhhhhhccCceeeEEE-------EcCCCCChHHHH
Q 013012 28 LLPVANR-PVLSYVLEQLEL----S-NIKDLIVVVEGADAALRVGGWISAAYVDRLHVEVA-------TVPEDVGTAGAL 94 (451)
Q Consensus 28 llpv~gk-pli~~~l~~l~~----~-gi~~iivv~~~~~~~~~i~~~~~~~~~~~~~~~i~-------~~~~~~gt~~~l 94 (451)
.+|.-|. ..|..+|+.+.+ . ...+|+|+-+.-. +...+.+.+. ..++. ..+...|.+.++
T Consensus 99 VIP~yNe~~~l~~~l~sl~~~l~~~~~~~EIIVVDDgSt--D~T~~i~~~~-----~~~v~~~~~~~i~~~~n~G~g~A~ 171 (387)
T 3f1y_A 99 VLPSRNVADTVGGIIDEIHALNERAPLIDQILVVDADSE--DGTAGVAASH-----GAEVYSENELMSGYGDAHGKGDAM 171 (387)
T ss_dssp EEEESSCTTTHHHHHHHHHHHHHHSCCCSEEEEEECSCS--SSHHHHHHHT-----TCEEEEGGGTTGGGCSCCSHHHHH
T ss_pred EEEcCCCHHHHHHHHHHHHHHHhcCCCCeEEEEEcCcCC--ccHHHHHHHh-----CchhcccceeEecCCccCCHHHHH
Confidence 4455554 677777777754 3 2457777754211 1122222221 11222 123568999999
Q ss_pred HHHHhcCCCCcEEEEcCCcc--CCCCchHHHHHHHhc-CceEEEEEe
Q 013012 95 RAIAHHLTAKDVLVVSGDLV--SDVPPGAVTAAHRRH-DAVVTAMIC 138 (451)
Q Consensus 95 ~~~~~~l~~~~~lvl~~D~i--~~~~~~~~l~~~~~~-~~~~t~~~~ 138 (451)
..+.+....+.++++.+|.. .+..+..+++...+. +.++.....
T Consensus 172 n~G~~~A~gd~i~~lDaD~~~~~p~~L~~l~~~l~~~p~~d~v~G~~ 218 (387)
T 3f1y_A 172 WRALSVTRGDLVLYIDADTRDFRPQLAYGVLGPVLEVPGVRFVKAAY 218 (387)
T ss_dssp HHHTTTCCSSEEEECCTTCSSCCTHHHHTTHHHHHHSTTCCEEEEEE
T ss_pred HHHHHhcCCCEEEEEcCCCCcCCHHHHHHHHHHHHHCCCceEEEEee
Confidence 99988876667888899954 566788888877654 566555443
No 181
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=46.51 E-value=78 Score=29.02 Aligned_cols=103 Identities=18% Similarity=0.174 Sum_probs=60.1
Q ss_pred cccCC-cchHHHHHHHHHHCC---CcEEEEEecCchhhHHHHHhhhhhccCce--eeEEEE-cCCCCChHHHHHHHHhcC
Q 013012 29 LPVAN-RPVLSYVLEQLELSN---IKDLIVVVEGADAALRVGGWISAAYVDRL--HVEVAT-VPEDVGTAGALRAIAHHL 101 (451)
Q Consensus 29 lpv~g-kpli~~~l~~l~~~g---i~~iivv~~~~~~~~~i~~~~~~~~~~~~--~~~i~~-~~~~~gt~~~l~~~~~~l 101 (451)
+|.-| ...|..+|+.+.+.. ..+|+|+-+.-. +...+.+.+. ..+. .+.++. .+...|.+.++..+++..
T Consensus 54 Ip~yN~~~~l~~~l~sl~~q~~~~~~eiivVDdgS~--D~t~~~~~~~-~~~~~~~~~~~~~~~~n~G~~~a~n~g~~~a 130 (329)
T 3ckj_A 54 LPALDEEDTIGSVIDSISPLVDGLVDELIVLDSGST--DDTEIRAVAA-GARVVSREQALPEVPIRPGKGEALWRSLAAS 130 (329)
T ss_dssp EEESSCTTTHHHHHHHHGGGBTTTBSEEEEEECSCC--SSHHHHHHHT-TCEEEEHHHHCTTSCCCCSHHHHHHHHHHHC
T ss_pred EeeCCCHHHHHHHHHHHHHhhCCCCcEEEEEeCCCC--chHHHHHHHh-hhhhccceeeeccCCCCCCHHHHHHHHHHhC
Confidence 45444 488999999987642 256777653211 1122222221 1110 011111 345689999999888887
Q ss_pred CCCcEEEEcCCcc--CCCCchHHHHHHHhc-CceEE
Q 013012 102 TAKDVLVVSGDLV--SDVPPGAVTAAHRRH-DAVVT 134 (451)
Q Consensus 102 ~~~~~lvl~~D~i--~~~~~~~~l~~~~~~-~~~~t 134 (451)
..+.++++.+|.+ .+..+..+++...+. +.++.
T Consensus 131 ~gd~i~~lD~D~~~~~p~~l~~l~~~l~~~~~~~~v 166 (329)
T 3ckj_A 131 RGDIVVFVDSDLINPHPMFVPWLVGPLLTGDGVHLV 166 (329)
T ss_dssp CCSEEEECCTTEESCCTTHHHHHHHHHHSCSSCCEE
T ss_pred CCCEEEEECCCCCCcChHHHHHHHHHHHhCCCccEE
Confidence 7677888999954 556678888875443 44443
No 182
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=43.43 E-value=97 Score=32.64 Aligned_cols=97 Identities=20% Similarity=0.199 Sum_probs=61.0
Q ss_pred ccccCCcc--hHHHHHHHHHHCCCc----EEEEEecCchhh-----------------HHHHHhhhhhccCceeeEEEEc
Q 013012 28 LLPVANRP--VLSYVLEQLELSNIK----DLIVVVEGADAA-----------------LRVGGWISAAYVDRLHVEVATV 84 (451)
Q Consensus 28 llpv~gkp--li~~~l~~l~~~gi~----~iivv~~~~~~~-----------------~~i~~~~~~~~~~~~~~~i~~~ 84 (451)
++|.-|.+ ++..+++.+.+.... +|+|+...-... +.++.+.. +.++.++..
T Consensus 145 iIPtyNe~~~lL~~~L~Sl~~q~yp~~~~eIiVVDDgStD~T~~~~d~~i~~~~~~~~~~l~~~~~-----~~~v~~i~~ 219 (802)
T 4hg6_A 145 LVPSYNEPADMLSVTLAAAKNMIYPARLRTVVLCDDGGTDQRCMSPDPELAQKAQERRRELQQLCR-----ELGVVYSTR 219 (802)
T ss_dssp EEECTTCCHHHHHHHHHHHHTSSCCTTCCEEEEESTTCHHHHHTCSSHHHHHHHHHHHHHHHHHHH-----HHTCEEEEC
T ss_pred EEEECCCCHHHHHHHHHHHHhccCCCCcEEEEEEECCCCccccccCCHHHHHHHHhhhHHHHHHHH-----hcCcEEEEe
Confidence 45666664 569999999776432 577776432111 01222211 224566655
Q ss_pred CCC-CChHHHHHHHHhcCCCCcEEEEcCC-ccCCCCchHHHHHHHhc
Q 013012 85 PED-VGTAGALRAIAHHLTAKDVLVVSGD-LVSDVPPGAVTAAHRRH 129 (451)
Q Consensus 85 ~~~-~gt~~~l~~~~~~l~~~~~lvl~~D-~i~~~~~~~~l~~~~~~ 129 (451)
++. .|-++++..+.+....+.++++.+| .+.+..+..+++...+.
T Consensus 220 ~~~~~GKa~alN~gl~~a~gd~Il~lDaD~~~~pd~L~~lv~~~~~d 266 (802)
T 4hg6_A 220 ERNEHAKAGNMSAALERLKGELVVVFDADHVPSRDFLARTVGYFVED 266 (802)
T ss_dssp SSCCSHHHHHHHHHHHHCCCSEEEECCTTEEECTTHHHHHHHHHHHS
T ss_pred cCCCCcchHHHHHHHHhcCCCEEEEECCCCCcChHHHHHHHHHHhcC
Confidence 554 6788889888888877778899999 44555678888877543
No 183
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=35.56 E-value=7.8 Score=40.56 Aligned_cols=91 Identities=14% Similarity=0.189 Sum_probs=0.0
Q ss_pred chHHHHHHHHHHCCCc--EEEEEecCchhhHHHHHhhhhhccC-ceeeEEEEcCCCCChHHHHHHHHhcCCCCcEEEEcC
Q 013012 35 PVLSYVLEQLELSNIK--DLIVVVEGADAALRVGGWISAAYVD-RLHVEVATVPEDVGTAGALRAIAHHLTAKDVLVVSG 111 (451)
Q Consensus 35 pli~~~l~~l~~~gi~--~iivv~~~~~~~~~i~~~~~~~~~~-~~~~~i~~~~~~~gt~~~l~~~~~~l~~~~~lvl~~ 111 (451)
..|..+|+.+.+.... +|+|+-..- .+...+.+.++... ...+.++..++..|.+.+.-.+++....+.++++.+
T Consensus 15 ~~L~~~L~Sll~Qt~~~~EIIVVDDgS--tD~t~~il~~~~~~~~~~i~~i~~~~n~G~~~arN~gi~~A~gdyI~flD~ 92 (729)
T 3l7i_A 15 EYITGCLESIKQQRTQDFNLIIVNDGS--TDQSKKLMDEAIKDYDKNIRFIDLDENSGHAHARNIALEEVETPYFMFLDA 92 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhCCCCCeEEEEEECCC--CCcHHHHHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHhccCCEEEEECC
Confidence 5677777777554333 344443211 11222223221111 123556655667888888888888776677888899
Q ss_pred C-ccCCCCchHHHHHHH
Q 013012 112 D-LVSDVPPGAVTAAHR 127 (451)
Q Consensus 112 D-~i~~~~~~~~l~~~~ 127 (451)
| .+.+..++.+++...
T Consensus 93 Dd~~~p~~l~~l~~~l~ 109 (729)
T 3l7i_A 93 DDELASYAITFYLEKFN 109 (729)
T ss_dssp -----------------
T ss_pred CCCCChhHHHHHHHHhc
Confidence 9 556666777777766
No 184
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=34.42 E-value=1e+02 Score=31.63 Aligned_cols=96 Identities=17% Similarity=0.160 Sum_probs=57.3
Q ss_pred CCcchHHHHHHHHHHC-----CCcEEEEEecCchh---hHHHHHhhhhhccCceeeEEEEcCCCCChHHHHHHHHhcC--
Q 013012 32 ANRPVLSYVLEQLELS-----NIKDLIVVVEGADA---ALRVGGWISAAYVDRLHVEVATVPEDVGTAGALRAIAHHL-- 101 (451)
Q Consensus 32 ~gkpli~~~l~~l~~~-----gi~~iivv~~~~~~---~~~i~~~~~~~~~~~~~~~i~~~~~~~gt~~~l~~~~~~l-- 101 (451)
++...|..+|+.+.+. ...+|+||=+.-.. ...+.+++.... ..+.++..+ ..|-+.+.-.+++..
T Consensus 190 N~~~~L~~~L~SL~~qt~~~~~~~EIIVVDNgStD~s~~~~~~e~~~~~~---~~I~vI~~~-N~G~a~a~N~Gl~~A~g 265 (657)
T 4fix_A 190 NRPADCVNALRELTADPLVDQVIGAVIVPDQGERKVRDHPDFPAAAARLG---SRLSIHDQP-NLGGSGGYSRVMYEALK 265 (657)
T ss_dssp SCHHHHHHHHHHHTTSHHHHTTEEEEEEEECSSSCGGGSTTHHHHHHHHG---GGEEEEECC-CCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHcCccccCCCCEEEEEECcCCCccchHHHHHHHHhcC---CCEEEEECC-CCCHHHHHHHHHHHHHh
Confidence 3458999999998664 23366666442211 112333333221 246777665 777777665554433
Q ss_pred --CCCcEEEEcCC-ccCCCCchHHHHHHHhcCc
Q 013012 102 --TAKDVLVVSGD-LVSDVPPGAVTAAHRRHDA 131 (451)
Q Consensus 102 --~~~~~lvl~~D-~i~~~~~~~~l~~~~~~~~ 131 (451)
..+.++++..| .+.+..+..+++.......
T Consensus 266 ~~~~dyIlfLD~D~~~~pd~L~~ll~~l~~~~~ 298 (657)
T 4fix_A 266 NTDCQQILFMDDDIRLEPDSILRVLAMHRFAKA 298 (657)
T ss_dssp HCCCSEEEEECSSEEECTHHHHHHHHHHHHBSS
T ss_pred cCCCCEEEEECCCCccChhHHHHHHHHHHhCCC
Confidence 34678999999 4555568888888776543
No 185
>2xvy_A Chelatase, putative; metal binding protein; HET: HEM; 1.70A {Desulfovibrio vulgaris} PDB: 2xvx_A* 2xvz_A*
Probab=27.31 E-value=1e+02 Score=27.37 Aligned_cols=25 Identities=12% Similarity=0.084 Sum_probs=20.5
Q ss_pred CcchHHHHHHHHHHCCCcEEEEEec
Q 013012 33 NRPVLSYVLEQLELSNIKDLIVVVE 57 (451)
Q Consensus 33 gkpli~~~l~~l~~~gi~~iivv~~ 57 (451)
+.|-+.-.++.|...|+++++|+--
T Consensus 63 ~~P~i~~al~~l~~~G~~~ivV~Pl 87 (269)
T 2xvy_A 63 AAPSPAEALAGMAEEGFTHVAVQSL 87 (269)
T ss_dssp CCCCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCCHHHHHHHHHHCCCCEEEEEec
Confidence 5688888899988888888887753
No 186
>3toe_A MTH10B, DNA/RNA-binding protein ALBA; SAC10B family, alpha/beta mixed, homodimer, unknown function; 2.20A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=23.56 E-value=1e+02 Score=22.55 Aligned_cols=35 Identities=23% Similarity=0.518 Sum_probs=27.4
Q ss_pred ccccCCcchHHHHHHHHHH--CCCcEEEEEecCchhh
Q 013012 28 LLPVANRPVLSYVLEQLEL--SNIKDLIVVVEGADAA 62 (451)
Q Consensus 28 llpv~gkpli~~~l~~l~~--~gi~~iivv~~~~~~~ 62 (451)
.+-+++||+..|++..+.. .|.+++++-..+...+
T Consensus 6 vv~vg~Kpv~~YV~~~i~~~n~g~~eV~ikA~G~aIs 42 (91)
T 3toe_A 6 VVYIGNKPVMNYVLAVVTQMNGGTSEVILKARGIAIS 42 (91)
T ss_dssp CEECCSSCHHHHHHHHHHHHHTTCCEEEEEEETTHHH
T ss_pred EEEECCCcHHHHHHHHHHHHhCCCCEEEEEEehhHHH
Confidence 3567899999999998854 4799999998766433
No 187
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A*
Probab=21.68 E-value=2.3e+02 Score=26.28 Aligned_cols=93 Identities=17% Similarity=0.071 Sum_probs=50.4
Q ss_pred ccccCCcchHHHHHHHHHHCC--C--cEEEEEecCchhhHHHHHhhhhhccCceeeEEEEc---------CCCCCh----
Q 013012 28 LLPVANRPVLSYVLEQLELSN--I--KDLIVVVEGADAALRVGGWISAAYVDRLHVEVATV---------PEDVGT---- 90 (451)
Q Consensus 28 llpv~gkpli~~~l~~l~~~g--i--~~iivv~~~~~~~~~i~~~~~~~~~~~~~~~i~~~---------~~~~gt---- 90 (451)
+++..|+|=+..+|+.+.++. . ..++|.-... .+++++.+.++. . ++..+.+ +...|.
T Consensus 7 iI~~yNRp~l~~~L~sL~~~~p~~~~~~iivsdDgs--~~~~~~vi~~~~-~--~I~~~~~~d~~~~~~~~~N~g~~~y~ 81 (343)
T 1fo8_A 7 LVIACDRSTVRRCLDKLLHYRPSAELFPIIVSQDCG--HEETAQVIASYG-S--AVTHIRQPDLSNIAVQPDHRKFQGYY 81 (343)
T ss_dssp EEEESSCTTHHHHHHHHHHHCSCTTTSCEEEEECTT--CHHHHHHHHTTG-G--GSEEEECSCCCCCCCCTTCGGGHHHH
T ss_pred EEEECCcHHHHHHHHHHHhcCCCcCCcEEEEEECCC--CHHHHHHHHHcC-C--ceEEEEcCCccccccchhhcCcccch
Confidence 445678877899999997764 2 2344443322 334555554321 1 1222211 222343
Q ss_pred --HHHHHHHHh----cCCCCcEEEEcCCccCCCCchHHHHH
Q 013012 91 --AGALRAIAH----HLTAKDVLVVSGDLVSDVPPGAVTAA 125 (451)
Q Consensus 91 --~~~l~~~~~----~l~~~~~lvl~~D~i~~~~~~~~l~~ 125 (451)
+..+..++. ....+.++++-.|++...++-++++.
T Consensus 82 ~ia~h~~~al~~vf~~~~~~~vIiLEDDl~~spdF~~y~~~ 122 (343)
T 1fo8_A 82 KIARHYRWALGQIFHNFNYPAAVVVEDDLEVAPDFFEYFQA 122 (343)
T ss_dssp HHHHHHHHHHHHHHTTSCCSEEEEEETTEEECTTHHHHHHH
T ss_pred hHhHHHHHHHHHHHHhccCCEEEEEcCCCeECHHHHHHHHH
Confidence 244444433 33456799999998888876554443
Done!