Query 013014
Match_columns 451
No_of_seqs 412 out of 3201
Neff 7.7
Searched_HMMs 29240
Date Mon Mar 25 20:36:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013014.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013014hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qo6_A Protease DO-like 1, chl 100.0 3E-57 1E-61 457.2 31.8 325 110-434 11-335 (348)
2 3stj_A Protease DEGQ; serine p 100.0 1.9E-53 6.5E-58 428.4 31.7 306 117-437 14-339 (345)
3 4a8c_A Periplasmic PH-dependen 100.0 3.8E-51 1.3E-55 424.1 36.6 303 116-433 13-335 (436)
4 3pv2_A DEGQ; trypsin fold, PDZ 100.0 5.6E-51 1.9E-55 424.1 27.7 301 116-432 19-353 (451)
5 1te0_A Protease DEGS; two doma 100.0 1E-49 3.5E-54 397.5 30.9 299 116-432 9-315 (318)
6 4fln_A Protease DO-like 2, chl 100.0 1.4E-49 4.9E-54 417.6 33.1 292 124-433 45-358 (539)
7 1ky9_A Protease DO, DEGP, HTRA 100.0 2.4E-49 8.1E-54 411.5 23.3 300 117-431 14-356 (448)
8 1y8t_A Hypothetical protein RV 100.0 1.7E-47 5.8E-52 382.4 32.9 289 116-432 6-314 (324)
9 1lcy_A HTRA2 serine protease; 100.0 1.2E-47 4E-52 383.7 26.4 291 116-430 15-322 (325)
10 3num_A Serine protease HTRA1; 100.0 1.5E-47 5.1E-52 384.1 21.5 297 113-433 11-323 (332)
11 1l1j_A Heat shock protease HTR 100.0 5.2E-38 1.8E-42 300.5 18.2 220 116-336 4-239 (239)
12 3sti_A Protease DEGQ; serine p 100.0 3.7E-37 1.3E-41 295.4 17.6 213 117-333 14-241 (245)
13 3lgi_A Protease DEGS; stress-s 100.0 4E-35 1.4E-39 280.2 21.8 213 115-334 19-234 (237)
14 3tjo_A Serine protease HTRA1; 100.0 1.5E-33 5E-38 268.4 18.8 202 114-325 29-230 (231)
15 3k6y_A Serine protease, possib 100.0 2.6E-30 8.8E-35 246.7 24.0 198 116-330 31-231 (237)
16 2w5e_A Putative serine proteas 99.9 2.9E-23 9.9E-28 186.5 19.2 138 150-313 19-156 (163)
17 2as9_A Serine protease; trypsi 99.9 1.2E-21 4.1E-26 183.2 14.0 159 151-325 22-203 (210)
18 1agj_A Epidermolytic toxin A; 99.9 3.6E-21 1.2E-25 183.6 15.8 161 151-323 54-240 (242)
19 2l97_A HTRA, putative serine p 99.8 1.3E-20 4.5E-25 163.9 10.2 116 305-432 2-127 (134)
20 2h5c_A Alpha-lytic protease; s 99.8 1.1E-19 3.9E-24 168.3 14.9 158 153-320 17-191 (198)
21 2w7s_A Serine protease SPLA; h 99.8 6.5E-20 2.2E-24 169.7 11.4 155 152-323 22-197 (200)
22 2o8l_A V8 protease, taphylococ 99.8 1.6E-18 5.6E-23 168.6 19.9 158 151-325 33-211 (274)
23 2vid_A Serine protease SPLB; h 99.8 1.3E-18 4.5E-23 161.0 14.5 157 152-324 22-202 (204)
24 1wcz_A Glutamyl endopeptidase; 99.8 4.8E-18 1.6E-22 164.8 18.2 158 151-325 33-211 (268)
25 1qtf_A Exfoliative toxin B; se 99.8 3.9E-19 1.3E-23 170.2 9.8 144 151-317 47-216 (246)
26 1hpg_A Glutamic acid specific 99.8 5.3E-18 1.8E-22 155.8 16.3 159 152-320 12-182 (187)
27 2oua_A Serine protease, protei 99.8 7.5E-18 2.6E-22 154.8 15.3 155 152-319 14-181 (188)
28 2qa9_E Streptogrisin-B; chymot 99.8 6E-18 2E-22 154.8 14.3 163 151-321 11-181 (185)
29 2ea3_A Chymotrypsin; celloulom 99.7 9.2E-17 3.1E-21 147.6 14.3 151 153-320 17-176 (189)
30 2pfe_A Protease A, alkaline se 99.7 5.2E-17 1.8E-21 148.9 10.8 153 152-319 14-178 (186)
31 1mbm_A NSP4 proteinase, chymot 99.7 1.2E-16 4.2E-21 142.5 10.9 115 150-296 13-130 (198)
32 2sga_A Proteinase A; hydrolase 99.7 1.2E-16 4E-21 145.8 10.1 155 151-320 11-176 (181)
33 3fan_A Non-structural protein; 99.6 4.7E-15 1.6E-19 134.5 7.6 118 150-297 28-145 (213)
34 1pq7_A Trypsin; ultra-high res 99.5 1.4E-12 4.8E-17 122.3 20.2 171 151-323 23-223 (224)
35 2xw9_A Complement factor D; im 99.5 7.7E-12 2.6E-16 117.4 22.0 172 151-324 23-227 (228)
36 2zch_P Prostate-specific antig 99.5 5.3E-12 1.8E-16 119.3 20.8 172 151-325 23-234 (237)
37 2pzd_A Serine protease HTRA2; 99.5 9.1E-14 3.1E-18 116.7 7.6 92 327-432 1-103 (113)
38 1gvz_A Kallikrein-1E2; antigen 99.5 3E-12 1E-16 121.0 18.9 169 152-325 24-234 (237)
39 1a7s_A Heparin binding protein 99.5 7.2E-12 2.5E-16 117.5 21.3 166 151-327 23-220 (225)
40 2aiq_A Protein C activator; sn 99.4 4.3E-12 1.5E-16 119.6 19.3 172 152-326 23-223 (231)
41 1fuj_A PR3, myeloblastin; hydr 99.4 1.2E-11 4E-16 115.6 22.1 164 151-324 26-220 (221)
42 2z7f_E Leukocyte elastase; ser 99.4 7.7E-12 2.6E-16 116.8 20.5 164 151-324 23-217 (218)
43 1npm_A Neuropsin; serine prote 99.4 6E-12 2.1E-16 118.1 19.8 169 151-324 23-224 (225)
44 1azz_A Collagenase; complex (s 99.4 5.8E-12 2E-16 118.4 19.3 171 151-325 23-223 (226)
45 1eq9_A Chymotrypsin; FIRE ANT, 99.4 3.9E-12 1.3E-16 119.2 17.9 168 152-324 24-220 (222)
46 2p3w_A Probable serine proteas 99.4 1.5E-13 5.2E-18 115.2 7.2 93 327-433 1-104 (112)
47 1mza_A Pro-granzyme K; apoptos 99.4 1.9E-11 6.6E-16 115.7 22.7 172 151-325 25-235 (240)
48 1fxy_A Coagulation factor XA-t 99.4 7.4E-12 2.5E-16 117.8 19.4 171 151-325 24-225 (228)
49 1lo6_A Kallikrein 6, HK6; seri 99.4 1.1E-11 3.9E-16 116.2 20.5 170 151-325 23-221 (223)
50 1ao5_A Glandular kallikrein-13 99.4 6.4E-12 2.2E-16 118.8 18.9 170 151-325 23-234 (237)
51 1ton_A Tonin; hydrolase(serine 99.4 9.3E-12 3.2E-16 117.5 19.6 169 152-325 22-232 (235)
52 3mfj_A Cationic trypsin; serin 99.4 1.2E-11 4.2E-16 115.9 20.4 169 151-325 22-221 (223)
53 3s69_A Thrombin-like enzyme de 99.4 1.5E-11 5.3E-16 115.6 20.8 174 151-327 23-227 (234)
54 4e7n_A Snake-venom thrombin-li 99.4 2.1E-11 7.1E-16 115.0 21.7 174 151-327 25-231 (238)
55 1bru_P Elastase, PPE; serine p 99.4 3.1E-11 1.1E-15 114.4 22.8 173 152-325 28-239 (241)
56 1hj8_A Trypsin I; hydrolase, r 99.4 1.5E-11 5.1E-16 115.3 20.3 169 151-325 22-220 (222)
57 2bdg_A Kallikrein-4; serine pr 99.4 1.7E-11 5.9E-16 114.9 20.6 169 151-324 23-221 (223)
58 1cgh_A Cathepsin G; inflammati 99.4 1.7E-11 5.7E-16 115.0 20.4 167 152-325 27-223 (224)
59 3s9c_A Vipera russelli protein 99.4 2.5E-11 8.5E-16 114.2 21.3 172 152-328 26-228 (234)
60 3h7t_A Group 3 allergen smipp- 99.4 9.7E-12 3.3E-16 116.8 18.3 172 151-326 23-230 (235)
61 2psx_A Kallikrein-5; zinc inhi 99.4 1.9E-11 6.6E-16 114.8 20.3 170 151-325 24-224 (227)
62 2qxi_A Kallikrein-7; S1 pocket 99.4 1.4E-11 4.9E-16 115.5 19.3 168 153-325 25-221 (224)
63 1elt_A Elastase; serine protei 99.4 1.8E-11 6.1E-16 115.6 20.0 171 152-323 28-235 (236)
64 2i4s_A General secretion pathw 99.4 3.1E-13 1.1E-17 112.1 6.8 101 314-429 5-105 (105)
65 4ag1_A Chymase; hydrolase-de n 99.4 5.3E-11 1.8E-15 111.4 22.9 168 151-325 27-224 (226)
66 1iau_A Granzyme B; hydrolase-h 99.4 2.8E-11 9.5E-16 113.7 21.0 167 152-325 27-225 (227)
67 2zgc_A Granzyme M; serine prot 99.4 4.1E-11 1.4E-15 113.7 22.3 175 151-326 23-230 (240)
68 1gvk_B Elastase 1, peptide inh 99.4 9.3E-12 3.2E-16 118.0 17.8 173 152-325 28-238 (240)
69 1si5_H Scatter factor, hepatoc 99.4 9.2E-11 3.1E-15 111.1 24.5 174 151-326 22-228 (240)
70 3i18_A LMO2051 protein; alpha- 99.4 1.6E-12 5.4E-17 106.8 10.6 83 350-446 7-89 (100)
71 1spj_A Kallikrein 1; serine pr 99.4 2.2E-11 7.6E-16 115.0 19.7 169 152-325 24-235 (238)
72 1orf_A Granzyme A; hydrolase-h 99.4 5.1E-11 1.7E-15 112.4 22.1 172 151-325 23-231 (234)
73 4i8h_A Cationic trypsin, beta- 99.4 2.4E-11 8.3E-16 113.5 19.6 171 151-325 22-221 (223)
74 3gov_B MAsp-1; complement, ser 99.4 5.9E-11 2E-15 112.5 22.0 172 151-325 24-248 (251)
75 1sgf_A 7S NGF, nerve growth fa 99.4 1.1E-11 3.7E-16 117.5 16.5 170 151-325 26-237 (240)
76 2asu_B Hepatocyte growth facto 99.4 4.4E-11 1.5E-15 112.9 20.4 174 151-326 21-227 (234)
77 1m9u_A Earthworm fibrinolytic 99.4 2.7E-11 9.1E-16 114.7 18.8 170 152-322 27-239 (241)
78 3rp2_A RAT MAST cell protease 99.4 6.6E-11 2.3E-15 110.5 20.8 182 126-324 12-223 (224)
79 2kjp_A Uncharacterized protein 99.4 4.8E-13 1.6E-17 108.1 5.2 74 350-435 1-74 (91)
80 1p3c_A Glutamyl-endopeptidase; 99.4 3.5E-12 1.2E-16 118.7 11.7 159 151-323 29-212 (215)
81 2oq5_A Transmembrane protease, 99.3 1.7E-10 5.8E-15 108.6 23.2 172 151-324 23-230 (232)
82 1euf_A Duodenase; serine prote 99.3 9.3E-11 3.2E-15 110.1 21.1 167 152-325 27-224 (227)
83 1aut_C Activated protein C; se 99.3 3.9E-11 1.3E-15 114.4 18.7 174 151-326 24-240 (250)
84 3ncl_A Suppressor of tumorigen 99.3 8.4E-11 2.9E-15 111.0 20.8 171 152-324 25-239 (241)
85 3fzz_A Granzyme C; hydrolase, 99.3 1.2E-10 4.1E-15 109.0 21.7 183 126-325 12-226 (227)
86 2r0l_A Hepatocyte growth facto 99.3 1.2E-10 4E-15 110.8 21.7 174 151-326 22-240 (248)
87 1pyt_D TC, PCPA-TC, chymotryps 99.3 1.3E-10 4.5E-15 110.8 21.9 188 126-324 25-249 (251)
88 3tvj_B Mannan-binding lectin s 99.3 5.4E-11 1.8E-15 112.2 18.9 174 151-325 21-240 (242)
89 3mhw_U Urokinase-type plasmino 99.3 1.4E-10 4.9E-15 109.7 21.7 171 152-324 29-245 (247)
90 2any_A Kininogenin, plasma kal 99.3 1.2E-10 4.1E-15 110.3 20.9 173 151-325 26-236 (241)
91 3beu_A Trypsin, SGT; beta shee 99.3 9.3E-11 3.2E-15 109.6 19.4 169 153-325 21-222 (224)
92 1ym0_A Fibrinotic enzyme compo 99.3 1.1E-10 3.7E-15 110.1 20.0 172 151-325 25-236 (238)
93 2hlc_A Collagenase; serine pro 99.3 1E-10 3.5E-15 109.9 19.6 171 151-324 27-226 (230)
94 2kl1_A YLBL protein; structure 99.3 3.6E-12 1.2E-16 103.5 8.2 74 350-435 5-78 (94)
95 2olg_A Pro-phenoloxidase activ 99.3 1.9E-10 6.4E-15 111.3 21.5 171 152-324 51-276 (278)
96 2vz5_A TAX1-binding protein 3; 99.3 2.5E-12 8.4E-17 112.2 7.1 97 322-430 28-134 (139)
97 3gyl_B Prostasin; ENAC, zymoge 99.3 1.3E-10 4.3E-15 111.1 19.6 174 151-326 23-243 (261)
98 1rtf_B (TC)-T-PA, two chain ti 99.3 3.4E-10 1.2E-14 107.7 22.3 172 151-324 29-250 (252)
99 3h7o_A Group 3 allergen smipp- 99.3 5.1E-11 1.8E-15 111.5 16.2 169 153-325 27-226 (228)
100 1yc0_A Hepatocyte growth facto 99.3 2E-10 6.9E-15 111.5 20.9 173 151-325 57-274 (283)
101 2jkh_A Activated factor XA hea 99.3 6.7E-11 2.3E-15 112.0 16.9 174 151-326 24-234 (241)
102 2f91_A Hepatopancreas trypsin; 99.3 2E-10 6.8E-15 108.5 20.1 168 153-323 29-235 (237)
103 2jde_A Urokinase-type plasmino 99.3 2.6E-10 9E-15 110.0 21.2 172 152-325 52-269 (276)
104 1t8o_A Chymotrypsin A; chymotr 99.3 1.7E-10 5.9E-15 109.6 19.6 172 151-325 39-243 (245)
105 1ddj_A Plasminogen; catalytic 99.3 4.1E-10 1.4E-14 107.0 22.2 173 151-325 41-245 (247)
106 3bg8_A Coagulation factor XIA 99.3 1.4E-10 4.9E-15 109.6 18.5 172 151-324 26-235 (238)
107 4dgj_A Enteropeptidase catalyt 99.3 2.3E-10 7.7E-15 107.7 19.5 172 151-324 23-234 (235)
108 1fon_A Procarboxypeptidase A-S 99.3 1.5E-11 5E-16 116.5 11.4 173 152-325 26-238 (240)
109 2i6v_A General secretion pathw 99.3 6.6E-12 2.2E-16 100.3 7.5 70 349-429 18-87 (87)
110 1fiw_A Beta-acrosin heavy chai 99.3 1E-09 3.5E-14 107.1 23.3 173 152-326 30-250 (290)
111 2bz6_H Blood coagulation facto 99.2 1.3E-10 4.4E-15 110.9 16.3 174 151-326 23-241 (254)
112 2wph_S Coagulation factor IXA 99.2 1.6E-10 5.4E-15 108.9 16.2 173 151-325 23-233 (235)
113 3rm2_H Thrombin heavy chain; s 99.2 2.1E-10 7.3E-15 109.2 16.9 172 152-325 26-255 (259)
114 1z8g_A Serine protease hepsin; 99.2 7.3E-10 2.5E-14 112.0 21.3 174 151-326 140-361 (372)
115 1zyo_A Serine protease; beta-b 99.2 8E-11 2.7E-15 107.6 12.5 160 127-319 16-185 (191)
116 2qy0_B Complement C1R subcompo 99.2 2.2E-10 7.6E-15 108.3 15.8 170 152-325 22-239 (242)
117 2f9n_A Alpha I tryptase; serin 99.2 2.9E-10 1E-14 107.8 16.1 172 152-325 27-242 (245)
118 3id1_A Regulator of sigma E pr 99.2 4.2E-11 1.4E-15 97.3 8.1 70 353-433 5-76 (95)
119 2bdy_A Thrombin; thrombin, com 99.2 7.2E-10 2.5E-14 108.0 18.4 173 151-325 55-285 (289)
120 3f1s_B Vitamin K-dependent pro 99.2 6.5E-11 2.2E-15 115.2 10.7 187 124-326 62-277 (283)
121 1uit_A Human discs large 5 pro 99.2 9.4E-12 3.2E-16 105.0 3.6 90 323-425 6-106 (117)
122 2eaq_A LIM domain only protein 99.2 1.8E-11 6.2E-16 98.1 4.9 73 331-421 16-90 (90)
123 1zjk_A Mannan-binding lectin s 99.2 1.2E-09 4E-14 111.5 19.6 172 153-325 184-401 (403)
124 2zpm_A Regulator of sigma E pr 99.1 8.9E-11 3E-15 94.2 8.0 69 352-432 6-74 (91)
125 3h5c_B Vitamin K-dependent pro 99.1 1.2E-09 4E-14 107.8 17.4 183 126-324 105-316 (317)
126 2b9l_A Prophenoloxidase activa 99.1 8.1E-10 2.8E-14 112.6 16.5 174 151-326 161-384 (394)
127 4f4o_C Haptoglobin; globin fol 99.1 1.5E-09 5.3E-14 108.6 17.9 172 151-325 125-345 (347)
128 2vnt_A Urokinase-type plasmino 99.1 6.9E-09 2.3E-13 99.9 21.1 189 126-325 35-269 (276)
129 3cp7_A Alkaline serine proteas 99.1 9.2E-10 3.1E-14 103.0 12.7 151 126-298 6-191 (218)
130 1elv_A Complement C1S componen 99.1 5.6E-09 1.9E-13 103.8 18.5 169 153-326 104-326 (333)
131 1arb_A Achromobacter protease 99.1 1.1E-09 3.9E-14 105.6 13.0 150 124-302 20-217 (268)
132 3cyy_A Tight junction protein 99.1 2.3E-10 7.7E-15 91.9 6.7 72 344-428 14-91 (92)
133 1md8_A C1R complement serine p 99.0 3.9E-09 1.3E-13 104.9 17.0 170 152-325 111-328 (329)
134 2pkt_A PDZ and LIM domain prot 99.0 1.6E-10 5.4E-15 92.8 5.4 76 332-424 13-90 (91)
135 2xxl_A GRAM-positive specific 99.0 4.9E-09 1.7E-13 107.3 17.8 173 152-326 146-374 (408)
136 2w4f_A Protein LAP4; structura 99.0 2.1E-10 7.1E-15 93.1 5.5 81 331-422 13-95 (97)
137 3nxp_A Prethrombin-1; alloster 99.0 1.6E-09 5.6E-14 111.4 13.4 173 151-325 190-420 (424)
138 1qau_A Neuronal nitric oxide s 99.0 7.3E-10 2.5E-14 92.4 8.3 85 332-433 13-100 (112)
139 1w9e_A Syntenin 1; cell adhesi 99.0 4.7E-10 1.6E-14 100.4 7.6 81 330-428 14-95 (166)
140 2vsp_A PDZ domain-containing p 99.0 4.7E-10 1.6E-14 90.0 6.7 73 333-423 15-89 (91)
141 2eeh_A PDZ domain-containing p 99.0 2.5E-10 8.4E-15 93.4 4.8 74 331-422 21-96 (100)
142 1gpz_A Complement C1R componen 99.0 8.7E-09 3E-13 104.8 17.2 170 152-325 179-396 (399)
143 2hga_A Conserved protein MTH13 99.0 1.2E-09 4.2E-14 93.3 8.9 67 349-431 24-90 (125)
144 2jil_A GRIP1 protein, glutamat 99.0 3.8E-10 1.3E-14 91.6 5.1 79 332-423 14-95 (97)
145 1wh1_A KIAA1095 protein; PDZ d 99.0 3E-10 1E-14 96.8 4.6 81 332-426 32-113 (124)
146 4dur_A Plasminogen, serine pro 99.0 2.4E-08 8.1E-13 109.9 20.9 173 151-325 585-789 (791)
147 1x5q_A LAP4 protein; PDZ domai 99.0 4.4E-10 1.5E-14 93.5 5.3 63 350-423 46-108 (110)
148 2pa1_A PDZ and LIM domain prot 99.0 1.3E-09 4.4E-14 86.6 7.3 73 332-421 12-86 (87)
149 2v90_A PDZ domain-containing p 98.9 4.4E-10 1.5E-14 91.1 4.2 62 350-424 30-93 (96)
150 2fcf_A Multiple PDZ domain pro 98.9 1.7E-09 5.8E-14 88.7 6.6 79 330-421 14-100 (103)
151 1v5l_A PDZ and LIM domain 3; a 98.9 1E-09 3.6E-14 90.2 5.1 76 332-424 15-92 (103)
152 4fgm_A Aminopeptidase N family 98.9 2.1E-09 7.1E-14 114.9 8.7 71 350-432 496-566 (597)
153 2f83_A Coagulation factor XI; 98.9 1.7E-08 5.7E-13 108.8 15.9 172 151-324 413-622 (625)
154 3tsv_A Tight junction protein 98.9 1.8E-09 6.1E-14 92.1 6.3 62 350-422 51-114 (124)
155 1rrk_A Complement factor B; BB 98.9 9.2E-09 3.1E-13 107.4 12.9 177 151-328 241-493 (497)
156 1vb7_A PDZ and LIM domain 2; P 98.9 1.2E-09 4E-14 88.3 4.7 75 332-423 16-92 (94)
157 3hrz_D Complement factor B; se 98.9 8.8E-09 3E-13 112.8 13.1 176 151-327 483-734 (741)
158 1ihj_A INAD; intermolecular di 98.9 2.2E-09 7.5E-14 87.2 6.3 59 350-421 37-98 (98)
159 2rcz_A Tight junction protein 98.9 2.4E-09 8.1E-14 83.5 6.2 64 344-420 12-81 (81)
160 3sfj_A TAX1-binding protein 3; 98.9 2E-09 6.8E-14 88.5 6.0 78 330-419 17-104 (104)
161 2xrc_A Human complement factor 98.9 2.7E-08 9.2E-13 105.9 16.0 172 152-325 345-556 (565)
162 2yub_A LIMK-2, LIM domain kina 98.9 7.4E-10 2.5E-14 93.6 3.0 63 350-425 44-110 (118)
163 1v5q_A GRIP1 homolog, glutamat 98.9 2.1E-09 7.3E-14 91.2 5.6 62 350-422 45-109 (122)
164 2jre_A C60-1 PDZ domain peptid 98.9 2.3E-09 8E-14 88.7 5.6 79 332-423 25-107 (108)
165 2dls_A PDZ-rhogef, RHO guanine 98.9 2.9E-09 1E-13 85.8 6.0 60 350-421 29-88 (93)
166 2uzc_A Human pdlim5, PDZ and L 98.8 4E-09 1.4E-13 83.9 6.6 59 350-421 27-87 (88)
167 3rle_A Golgi reassembly-stacki 98.8 2.2E-09 7.5E-14 99.8 5.8 70 349-429 15-85 (209)
168 3bpu_A Membrane-associated gua 98.8 5.7E-09 2E-13 83.0 7.5 71 333-421 15-87 (88)
169 2jxo_A Ezrin-radixin-moesin-bi 98.8 1.3E-09 4.3E-14 88.7 3.5 73 333-422 21-95 (98)
170 1rgw_A ZAsp protein; PDZ, cyph 98.8 4.1E-09 1.4E-13 83.2 6.4 72 333-421 12-85 (85)
171 2he4_A Na(+)/H(+) exchange reg 98.8 3.7E-09 1.3E-13 84.5 6.0 59 350-421 28-88 (90)
172 2kom_A Partitioning defective 98.8 6.1E-09 2.1E-13 88.3 7.6 62 349-421 57-121 (121)
173 1b8q_A Protein (neuronal nitri 98.8 2E-09 6.9E-14 91.9 4.6 84 332-432 20-106 (127)
174 2koj_A Partitioning defective 98.8 6.8E-09 2.3E-13 86.3 7.4 62 350-422 39-103 (111)
175 3khf_A Microtubule-associated 98.8 4.5E-09 1.5E-13 85.6 6.1 60 350-422 34-95 (99)
176 2q3g_A PDZ and LIM domain prot 98.8 5.1E-09 1.7E-13 83.5 6.3 60 350-422 27-88 (89)
177 2i04_A Membrane-associated gua 98.8 7.3E-09 2.5E-13 81.8 7.0 58 350-418 25-85 (85)
178 2iwq_A Multiple PDZ domain pro 98.8 5E-09 1.7E-13 89.1 6.5 78 331-421 35-120 (123)
179 1uf1_A KIAA1526 protein; PDZ d 98.8 1E-09 3.6E-14 93.8 2.2 69 350-430 46-114 (128)
180 1wif_A RSGI RUH-020, riken cDN 98.8 5E-09 1.7E-13 89.5 6.2 59 350-419 49-110 (126)
181 1n7e_A AMPA receptor interacti 98.8 8.2E-09 2.8E-13 83.7 7.2 73 333-422 17-92 (97)
182 2o2t_A Multiple PDZ domain pro 98.8 1.7E-09 5.7E-14 91.0 3.0 62 350-424 49-114 (117)
183 1ueq_A Membrane associated gua 98.8 1.1E-08 3.7E-13 86.9 8.0 61 350-421 44-107 (123)
184 2yt7_A Amyloid beta A4 precurs 98.8 7.7E-09 2.6E-13 84.7 6.7 75 332-419 21-98 (101)
185 1wf7_A Enigma homologue protei 98.8 1.8E-09 6.1E-14 88.7 2.8 67 350-429 29-97 (103)
186 2h2b_A Tight junction protein 98.8 7.3E-09 2.5E-13 85.5 6.3 62 350-423 39-100 (107)
187 2awx_A Synapse associated prot 98.8 5.9E-09 2E-13 85.9 5.5 67 350-429 33-102 (105)
188 1wi2_A Riken cDNA 2700099C19; 98.8 7.2E-09 2.5E-13 85.3 6.0 72 332-421 27-100 (104)
189 2iwn_A Multiple PDZ domain pro 98.8 8.5E-09 2.9E-13 83.3 6.3 77 332-421 15-94 (97)
190 1uep_A Membrane associated gua 98.8 4.8E-09 1.6E-13 86.2 4.8 74 333-421 21-97 (103)
191 4amh_A Disks large homolog 1; 98.8 1.5E-08 5.2E-13 83.7 7.8 68 350-430 32-103 (106)
192 2opg_A Multiple PDZ domain pro 98.8 1.3E-08 4.4E-13 82.6 7.0 76 333-424 16-94 (98)
193 1ujd_A KIAA0559 protein; PDZ d 98.8 2.9E-09 9.8E-14 89.7 3.2 81 329-422 27-111 (117)
194 1p1d_A PDZ45, glutamate recept 98.8 1.4E-08 4.7E-13 93.2 7.9 79 332-421 18-99 (196)
195 1uez_A KIAA1526 protein; PDZ d 98.7 2.6E-09 8.8E-14 87.4 2.6 61 350-422 35-95 (101)
196 2f5y_A Regulator of G-protein 98.7 1.8E-08 6.1E-13 80.7 7.4 61 350-423 24-86 (91)
197 2eeg_A PDZ and LIM domain prot 98.7 1.2E-08 4.1E-13 82.3 6.4 59 350-421 32-92 (94)
198 2e7k_A Maguk P55 subfamily mem 98.7 9.5E-09 3.2E-13 82.5 5.7 70 331-420 17-88 (91)
199 1va8_A Maguk P55 subfamily mem 98.7 1.1E-08 3.7E-13 85.6 6.3 60 350-422 48-110 (113)
200 2i1n_A Discs, large homolog 3; 98.7 7.7E-09 2.6E-13 84.6 5.0 62 350-424 34-98 (102)
201 1uew_A Membrane associated gua 98.7 1E-08 3.5E-13 85.8 5.9 59 351-422 44-105 (114)
202 2odp_A Complement C2; C3/C5 co 98.7 2E-08 7E-13 105.2 9.4 174 151-325 246-501 (509)
203 2dmz_A INAD-like protein; PDZ 98.7 6.4E-09 2.2E-13 89.0 4.6 62 350-424 46-110 (129)
204 1d5g_A Human phosphatase HPTP1 98.7 2E-08 6.8E-13 81.1 7.3 59 350-421 33-94 (96)
205 3rle_A Golgi reassembly-stacki 98.7 1.2E-08 4E-13 94.8 6.6 84 331-429 94-181 (209)
206 2edz_A PDZ domain-containing p 98.7 7.7E-09 2.6E-13 86.5 4.8 66 350-428 38-105 (114)
207 2fne_A Multiple PDZ domain pro 98.7 1.5E-08 5.2E-13 85.3 6.6 60 350-422 53-115 (117)
208 2vwr_A Ligand of NUMB protein 98.7 8E-09 2.7E-13 83.4 4.7 60 350-422 29-91 (95)
209 3ngh_A PDZ domain-containing p 98.7 6E-09 2.1E-13 85.9 4.0 61 350-423 26-88 (106)
210 1m5z_A GRIP, AMPA receptor int 98.7 1.3E-08 4.4E-13 81.4 5.7 57 350-419 32-90 (91)
211 1nf3_C PAR-6B; semi-CRIB motif 98.7 8E-09 2.7E-13 88.4 4.7 59 350-421 65-126 (128)
212 2r4h_A Membrane-associated gua 98.7 2.3E-08 8E-13 83.4 7.5 73 333-422 36-111 (112)
213 2fe5_A Presynaptic protein SAP 98.7 2.5E-08 8.4E-13 80.2 7.1 59 350-421 33-94 (94)
214 2q9v_A Membrane-associated gua 98.7 1.1E-08 3.7E-13 81.7 4.9 60 350-420 27-89 (90)
215 1ujv_A Membrane associated gua 98.7 2.9E-08 1E-12 80.5 7.5 60 350-422 32-93 (96)
216 1wfg_A Regulating synaptic mem 98.7 1.8E-08 6.1E-13 86.6 6.5 61 350-421 65-128 (131)
217 2d90_A PDZ domain containing p 98.7 1.7E-08 5.8E-13 82.6 6.0 72 333-422 18-91 (102)
218 3gsl_A Disks large homolog 4; 98.7 3.3E-08 1.1E-12 89.9 8.5 89 333-432 17-109 (196)
219 2djt_A Unnamed protein product 98.7 1.8E-08 6E-13 82.8 5.8 60 350-422 38-100 (104)
220 2kpk_A Membrane-associated gua 98.7 2.7E-08 9.4E-13 85.2 6.9 61 350-421 43-106 (129)
221 2eno_A Synaptojanin-2-binding 98.7 1.6E-08 5.5E-13 85.4 5.4 78 332-422 28-109 (120)
222 1um1_A KIAA1849 protein, RSGI 98.7 2E-09 7E-14 89.4 -0.2 67 349-428 35-104 (110)
223 3e17_A Tight junction protein 98.7 2.2E-08 7.6E-13 79.8 5.8 58 350-420 21-81 (88)
224 3r68_A Na(+)/H(+) exchange reg 98.7 3.2E-08 1.1E-12 79.7 6.8 72 333-422 17-90 (95)
225 1wha_A KIAA0147 protein, scrib 98.7 2.7E-08 9.2E-13 81.9 6.4 76 333-421 19-99 (105)
226 2kv8_A RGS12, regulator of G-p 98.7 1.9E-08 6.6E-13 79.0 5.3 58 350-420 23-82 (83)
227 2byg_A Channel associated prot 98.7 2.9E-08 9.8E-13 83.6 6.6 59 350-421 54-115 (117)
228 2jik_A Synaptojanin-2 binding 98.7 3E-08 1E-12 80.9 6.4 59 350-421 37-98 (101)
229 1wg6_A Hypothetical protein (r 98.7 1.2E-08 4.1E-13 87.2 4.2 80 332-422 37-124 (127)
230 3mmg_A Nuclear inclusion prote 98.7 1.8E-06 6.1E-11 80.5 18.7 163 125-314 14-183 (241)
231 3cbz_A Dishevelled-2; PDZ doma 98.6 3E-08 1E-12 82.2 6.0 62 350-422 33-98 (108)
232 2la8_A Inactivation-NO-after-p 98.6 2.1E-08 7E-13 83.0 5.0 58 350-420 25-85 (106)
233 1v62_A KIAA1719 protein; struc 98.6 2.4E-08 8.3E-13 84.0 5.5 60 350-422 42-104 (117)
234 2ego_A General receptor for ph 98.6 4.4E-08 1.5E-12 79.2 6.9 57 350-419 37-95 (96)
235 1kwa_A Hcask/LIN-2 protein; PD 98.6 4.3E-08 1.5E-12 78.1 6.6 72 332-422 13-87 (88)
236 2iwo_A Multiple PDZ domain pro 98.6 1.5E-08 5E-13 85.8 3.9 63 350-425 53-118 (120)
237 2ejy_A 55 kDa erythrocyte memb 98.6 2.7E-08 9.2E-13 81.0 5.3 68 333-419 25-95 (97)
238 1whd_A RGS3, regulator of G-pr 98.6 3.9E-08 1.3E-12 80.2 6.2 59 350-421 36-96 (100)
239 1g9o_A NHE-RF; PDZ domain, com 98.6 4.2E-08 1.5E-12 78.4 6.3 73 333-422 15-89 (91)
240 1q7x_A PDZ2B domain of PTP-BAS 98.6 3.4E-08 1.2E-12 81.6 5.8 61 350-423 42-105 (108)
241 3axa_A Afadin, nectin-3, prote 98.6 4.6E-08 1.6E-12 80.6 6.5 60 350-422 38-100 (106)
242 2kjd_A Sodium/hydrogen exchang 98.6 1.8E-08 6.2E-13 85.9 4.1 68 350-429 33-104 (128)
243 2vsv_A Rhophilin-2; scaffold p 98.6 5.9E-08 2E-12 80.7 6.9 60 350-421 44-105 (109)
244 3qe1_A Sorting nexin-27, G pro 98.6 3.8E-08 1.3E-12 81.1 5.6 60 350-422 43-104 (107)
245 2dm8_A INAD-like protein; PDZ 98.6 3.2E-08 1.1E-12 82.8 5.2 76 332-423 28-106 (116)
246 2qg1_A Multiple PDZ domain pro 98.6 5.5E-08 1.9E-12 77.9 6.3 71 333-421 17-90 (92)
247 1y7n_A Amyloid beta A4 precurs 98.6 5.8E-08 2E-12 77.8 6.2 55 351-419 33-89 (90)
248 3i4w_A Disks large homolog 4; 98.6 3.3E-08 1.1E-12 81.0 4.8 59 350-421 35-96 (104)
249 2g5m_B Neurabin-2; spinophilin 98.6 1.3E-08 4.3E-13 85.0 2.2 66 350-428 35-103 (113)
250 2yuy_A RHO GTPase activating p 98.6 1.6E-08 5.5E-13 86.2 2.9 59 350-421 61-121 (126)
251 2qkv_A Inactivation-NO-after-p 98.6 3.9E-08 1.3E-12 79.6 5.0 58 350-420 31-91 (96)
252 1wfv_A Membrane associated gua 98.6 2.7E-08 9.4E-13 81.3 4.0 73 333-422 23-98 (103)
253 1q3o_A Shank1; PDZ, GKAP, pept 98.6 7.7E-08 2.6E-12 79.7 6.8 58 350-420 45-104 (109)
254 4a8c_A Periplasmic PH-dependen 98.6 1.2E-07 4.3E-12 97.6 9.8 70 350-432 363-432 (436)
255 2qbw_A PDZ-fibronectin fusion 98.6 9.7E-08 3.3E-12 87.2 8.0 67 350-430 24-95 (195)
256 2dlu_A INAD-like protein; PDZ 98.6 5.5E-08 1.9E-12 80.8 5.8 71 333-422 27-100 (111)
257 2db5_A INAD-like protein; PDZ 98.6 6.8E-08 2.3E-12 82.4 6.4 75 333-421 38-116 (128)
258 1tp5_A Presynaptic density pro 98.6 3.9E-08 1.3E-12 82.8 4.8 72 334-421 27-99 (119)
259 2edp_A Fragment, shroom family 98.6 5.1E-08 1.8E-12 79.5 5.1 60 350-422 35-96 (100)
260 1qav_A Alpha-1 syntrophin (res 98.6 8E-08 2.7E-12 76.6 6.1 56 350-418 30-88 (90)
261 3qik_A Phosphatidylinositol 3, 98.6 4.4E-08 1.5E-12 79.8 4.5 57 350-417 39-98 (101)
262 3kzd_A TIAM-1, T-lymphoma inva 98.6 1.2E-07 4E-12 76.6 6.9 68 332-417 20-89 (94)
263 1x6d_A Interleukin-16; PDZ dom 98.6 2.2E-08 7.6E-13 84.3 2.7 63 350-424 42-107 (119)
264 1yph_C Chymotrypsin A, chain B 98.6 1.2E-06 4.2E-11 74.7 13.8 85 151-237 24-128 (131)
265 1wi4_A Synip, syntaxin binding 98.6 5.5E-08 1.9E-12 80.8 5.1 61 350-421 41-106 (109)
266 2dkr_A LIN-7 homolog B; LIN-7B 98.5 8E-08 2.7E-12 77.0 5.8 59 350-421 30-91 (93)
267 1mfg_A ERB-B2 interacting prot 98.5 7.1E-08 2.4E-12 77.7 5.4 57 350-420 35-93 (95)
268 2gzv_A PRKCA-binding protein; 98.5 1.2E-07 4.2E-12 79.3 6.9 71 331-418 35-108 (114)
269 2d8i_A T-cell lymphoma invasio 98.5 7.7E-08 2.6E-12 80.6 5.4 69 334-420 31-101 (114)
270 3b76_A E3 ubiquitin-protein li 98.5 1.1E-07 3.9E-12 80.1 6.5 58 350-420 53-113 (118)
271 2qt5_A Glutamate receptor-inte 98.5 1.9E-07 6.5E-12 85.7 8.5 59 350-421 33-94 (200)
272 1fc6_A Photosystem II D1 prote 98.5 3.5E-07 1.2E-11 92.9 11.2 85 331-431 84-173 (388)
273 3gsl_A Disks large homolog 4; 98.5 1E-07 3.5E-12 86.7 6.5 62 350-424 130-194 (196)
274 1wf8_A Neurabin-I; PDZ domain, 98.5 4.9E-08 1.7E-12 80.6 3.9 59 350-421 40-101 (107)
275 3pv2_A DEGQ; trypsin fold, PDZ 98.5 1.1E-07 3.7E-12 98.4 7.3 65 350-427 386-450 (451)
276 3o46_A Maguk P55 subfamily mem 98.5 1.4E-07 4.9E-12 75.6 6.4 60 350-422 28-90 (93)
277 1vae_A Rhophilin 2, rhophilin, 98.5 9E-08 3.1E-12 79.8 5.3 57 350-418 36-94 (111)
278 3k1r_A Harmonin; protein-prote 98.5 1.9E-07 6.6E-12 85.4 7.3 58 350-421 110-169 (192)
279 1x5n_A Harmonin; PDZ domain, u 98.5 1.7E-08 5.7E-13 84.4 0.1 65 350-428 41-108 (114)
280 2edv_A FERM and PDZ domain-con 98.5 1.1E-07 3.6E-12 77.1 4.9 57 350-420 31-89 (96)
281 2qt5_A Glutamate receptor-inte 98.5 1.3E-07 4.5E-12 86.8 6.1 62 350-424 135-199 (200)
282 2daz_A INAD-like protein; PDZ 98.5 1.5E-07 5.1E-12 79.9 5.9 60 350-422 51-113 (124)
283 1uhp_A Hypothetical protein KI 98.5 2.4E-07 8.2E-12 76.4 6.7 59 350-421 41-102 (107)
284 3soe_A Membrane-associated gua 98.5 4.2E-07 1.4E-11 75.8 8.2 63 351-426 35-99 (113)
285 3l4f_D SH3 and multiple ankyri 98.5 2.7E-07 9.3E-12 79.3 7.1 61 350-423 65-127 (132)
286 2eei_A PDZ domain-containing p 98.4 1.5E-07 5E-12 77.4 5.0 60 350-422 32-93 (106)
287 1uju_A Scribble; PDZ domain, c 98.4 5.4E-08 1.8E-12 80.9 2.2 59 350-421 44-105 (111)
288 1n7t_A 99-MER peptide of densi 98.4 2.8E-07 9.6E-12 75.4 6.5 57 350-420 43-101 (103)
289 3r0h_A INAD, inactivation-NO-a 98.4 3.8E-07 1.3E-11 83.9 7.8 68 350-429 45-119 (206)
290 1v6b_A Harmonin isoform A1; st 98.4 6.6E-08 2.3E-12 81.5 2.4 58 351-419 44-106 (118)
291 3nfk_A Tyrosine-protein phosph 98.4 2.1E-07 7.3E-12 76.6 5.4 59 350-419 43-107 (107)
292 2d92_A INAD-like protein; PDZ 98.4 2.1E-07 7.3E-12 76.9 5.4 59 350-420 44-105 (108)
293 2dc2_A GOPC, golgi associated 98.4 5.4E-07 1.9E-11 73.8 7.5 59 350-421 35-96 (103)
294 2cs5_A Tyrosine-protein phosph 98.4 9.2E-08 3.1E-12 80.5 2.7 64 350-424 41-110 (119)
295 1p1d_A PDZ45, glutamate recept 98.4 3.1E-07 1.1E-11 84.1 6.3 75 332-421 119-196 (196)
296 2ehr_A INAD-like protein; PDZ 98.4 2.7E-07 9.2E-12 77.4 5.4 59 350-421 50-111 (117)
297 4e34_A Golgi-associated PDZ an 98.4 6E-07 2.1E-11 70.9 6.9 56 350-418 28-86 (87)
298 2pka_B Kallikrein A; serine pr 98.4 3E-06 1E-10 74.2 12.1 126 198-325 7-149 (152)
299 3tsz_A Tight junction protein 98.4 3.9E-07 1.3E-11 92.5 6.6 72 333-421 20-93 (391)
300 1um7_A Synapse-associated prot 98.4 2.1E-07 7.1E-12 77.3 3.8 71 333-421 27-100 (113)
301 1lvm_A Catalytic domain of the 98.4 3.9E-05 1.3E-09 71.0 19.3 171 125-323 22-201 (229)
302 3hpk_A Protein interacting wit 98.4 6.6E-07 2.3E-11 75.9 7.0 56 350-418 45-103 (125)
303 1i16_A Interleukin 16, LCF; cy 98.3 4.5E-07 1.5E-11 77.6 5.6 60 350-421 57-119 (130)
304 3egg_C Spinophilin; PP1, serin 98.3 7.6E-07 2.6E-11 79.9 7.0 57 350-419 111-170 (170)
305 2z17_A Pleckstrin homology SEC 98.3 3.1E-07 1.1E-11 75.3 4.0 54 350-416 48-103 (104)
306 2csj_A TJP2 protein; PDZ domai 98.3 2.7E-07 9.2E-12 77.4 3.1 59 350-422 46-106 (117)
307 3shw_A Tight junction protein 98.3 6.7E-07 2.3E-11 92.4 6.5 61 350-421 23-85 (468)
308 2krg_A Na(+)/H(+) exchange reg 98.3 3.9E-08 1.3E-12 91.7 -3.3 67 350-429 33-104 (216)
309 3r0h_A INAD, inactivation-NO-a 98.2 1.1E-06 3.9E-11 80.6 6.2 58 350-420 136-196 (206)
310 1ufx_A KIAA1526 protein; PDZ d 98.2 7E-07 2.4E-11 73.3 3.6 61 350-421 32-98 (103)
311 1r6j_A Syntenin 1; PDZ, membra 98.2 2.6E-06 9E-11 66.8 6.0 53 353-418 26-80 (82)
312 3suz_A Amyloid beta A4 precurs 98.1 9.6E-07 3.3E-11 89.6 3.8 68 350-428 232-302 (388)
313 1ky9_A Protease DO, DEGP, HTRA 98.1 4.2E-07 1.4E-11 94.0 0.0 65 350-427 383-447 (448)
314 3k50_A Putative S41 protease; 98.0 1.8E-06 6.1E-11 87.9 3.6 58 351-422 91-148 (403)
315 2lob_A Golgi-associated PDZ an 97.3 5.9E-07 2E-11 74.9 0.0 55 350-417 53-110 (112)
316 1z87_A Alpha-1-syntrophin; pro 98.0 4.7E-06 1.6E-10 79.8 4.7 60 350-422 103-165 (263)
317 2xkx_A Disks large homolog 4; 97.7 2.9E-05 9.9E-10 84.9 6.5 68 350-430 89-161 (721)
318 3gge_A PDZ domain-containing p 97.7 6.8E-05 2.3E-09 60.2 6.8 73 332-420 16-90 (95)
319 1w9e_A Syntenin 1; cell adhesi 97.7 3.2E-06 1.1E-10 75.2 -1.3 55 353-429 110-164 (166)
320 2xkx_A Disks large homolog 4; 97.7 3.6E-05 1.2E-09 84.1 6.5 63 349-424 183-248 (721)
321 1k32_A Tricorn protease; prote 97.7 5.8E-05 2E-09 85.5 8.2 69 350-429 748-825 (1045)
322 3qzr_A 3C protein; chymotrypsi 97.6 0.014 4.8E-07 52.4 21.5 157 126-313 16-178 (187)
323 3zve_A 3C protease; hydrolase, 97.6 0.018 6.2E-07 52.0 21.6 147 151-313 22-174 (190)
324 3q3y_A HEVB EV93 3C protease; 97.5 0.019 6.4E-07 51.6 20.4 157 126-313 14-176 (191)
325 4dcd_A Protease 3C, genome pol 97.5 0.03 1E-06 50.4 21.8 147 151-313 29-181 (190)
326 2hal_A Hepatitis A protease 3C 97.5 0.0021 7E-08 59.4 14.0 172 120-313 4-204 (212)
327 4fln_A Protease DO-like 2, chl 97.3 0.00046 1.6E-08 72.5 8.4 60 350-422 415-474 (539)
328 1cqq_A Type 2 rhinovirus 3C pr 97.1 0.082 2.8E-06 47.3 19.9 145 152-313 23-174 (180)
329 2b0f_A Picornain 3C (protease 97.1 0.021 7.3E-07 51.1 15.7 143 152-313 23-173 (182)
330 2pka_A Kallikrein A; serine pr 96.7 0.0059 2E-07 46.8 8.2 49 151-200 23-78 (80)
331 3suz_A Amyloid beta A4 precurs 96.7 0.00028 9.7E-09 71.3 0.0 58 350-420 315-374 (388)
332 2bhg_A Foot-and-mouth disease 96.5 0.0075 2.6E-07 55.5 8.8 159 153-324 31-204 (209)
333 2ijd_1 Picornain 3C, RNA-direc 95.8 0.47 1.6E-05 50.8 19.6 144 152-313 23-174 (644)
334 1yph_E Chymotrypsin A, chain C 94.3 0.044 1.5E-06 43.5 4.5 52 273-325 41-95 (97)
335 1wxr_A Haemoglobin protease; h 92.0 0.28 9.6E-06 54.6 7.8 79 152-236 56-144 (1048)
336 3e90_B NS3 protease; trypsin-l 90.9 0.49 1.7E-05 41.9 6.6 132 124-295 21-155 (198)
337 2fp7_B Serine protease NS3; fl 90.6 0.15 5.1E-06 44.3 3.1 114 152-295 20-136 (172)
338 2ggv_B NS3, non-structural pro 90.3 0.16 5.6E-06 44.5 3.1 134 124-297 16-152 (185)
339 2fom_B Polyprotein; flavivirus 90.1 0.17 6E-06 44.4 3.1 133 123-295 16-151 (185)
340 3lkw_A Fusion protein of nonst 89.7 0.67 2.3E-05 42.2 6.6 128 128-295 71-201 (236)
341 3u1j_B Serine protease NS3; se 89.4 0.22 7.5E-06 43.9 3.2 132 124-295 26-160 (191)
342 1ep5_B Capsid protein C, coat 88.9 0.56 1.9E-05 38.9 5.1 32 267-298 96-127 (157)
343 1vcp_A Semliki forest virus ca 88.4 0.72 2.5E-05 37.8 5.4 33 267-299 89-121 (149)
344 4agk_A Capsid protein, coat pr 87.8 0.82 2.8E-05 38.0 5.4 31 269-299 99-129 (158)
345 2yew_A Capsid protein, coat pr 87.4 0.76 2.6E-05 41.6 5.4 33 267-299 193-225 (253)
346 1svp_A Sindbis virus capsid pr 87.1 0.93 3.2E-05 37.8 5.4 33 267-299 98-130 (161)
347 1kxf_A Sindbis virus capsid pr 85.7 0.93 3.2E-05 41.4 5.1 32 267-298 203-234 (264)
348 4ash_A NS6 protease; hydrolase 84.1 8.1 0.00028 33.0 9.8 136 151-299 14-164 (185)
349 3su6_A NS3 protease, NS4A prot 79.5 1.2 3.9E-05 39.3 3.0 42 273-315 154-195 (203)
350 2fyq_A Chymotrypsin-like cyste 74.2 18 0.00062 31.0 8.9 135 152-299 26-175 (194)
351 4hcz_A PHD finger protein 1; p 61.8 27 0.00092 24.7 6.2 38 172-209 4-41 (58)
352 2eqj_A Metal-response element- 51.4 45 0.0015 24.3 6.1 37 172-208 14-50 (66)
353 3s6n_G Small nuclear ribonucle 48.6 49 0.0017 24.5 6.4 33 176-208 15-47 (76)
354 2o8m_A Protease; NS3, NS4A, vi 46.8 12 0.00041 33.3 2.9 42 275-317 146-187 (200)
355 3dor_A Protein CT_858, CPAF; m 44.2 27 0.00093 36.5 5.7 49 382-430 113-185 (583)
356 1h64_1 SnRNP SM-like protein; 44.0 37 0.0013 24.9 5.1 33 176-208 15-47 (75)
357 1i4k_A Putative snRNP SM-like 43.7 39 0.0013 24.9 5.2 33 176-208 15-47 (77)
358 1th7_A SnRNP-2, small nuclear 42.6 40 0.0014 25.3 5.1 33 176-208 20-52 (81)
359 1d3b_B Protein (small nuclear 41.3 37 0.0013 26.0 4.8 33 176-208 15-47 (91)
360 1mgq_A SM-like protein; LSM, R 39.9 46 0.0016 25.1 5.1 33 176-208 26-58 (83)
361 4esy_A CBS domain containing m 39.8 14 0.00046 31.4 2.3 21 276-296 47-67 (170)
362 1uf1_A KIAA1526 protein; PDZ d 39.5 5 0.00017 32.9 -0.6 25 406-430 5-29 (128)
363 1d3b_A Protein (small nuclear 38.2 58 0.002 24.0 5.3 33 176-208 16-48 (75)
364 1z8r_A Coxsackievirus B4 polyp 37.5 56 0.0019 28.2 5.6 31 266-297 113-143 (166)
365 4emk_B U6 snRNA-associated SM- 37.4 43 0.0015 24.6 4.5 32 176-207 15-46 (75)
366 3s6n_F Small nuclear ribonucle 37.2 56 0.0019 24.9 5.2 32 176-207 17-48 (86)
367 1y96_A Gemin6, SIP2, GEM-assoc 37.1 78 0.0027 24.3 5.9 32 176-207 18-50 (86)
368 4emg_A Probable U6 snRNA-assoc 36.6 54 0.0018 25.4 5.1 33 176-208 20-52 (93)
369 1ljo_A Archaeal SM-like protei 36.5 61 0.0021 23.9 5.2 33 176-208 16-49 (77)
370 2jvf_A De novo protein M7; tet 36.1 40 0.0014 24.8 3.9 21 410-430 6-26 (96)
371 4emk_A U6 snRNA-associated SM- 35.8 56 0.0019 25.4 5.1 33 176-208 31-63 (94)
372 1b34_A Protein (small nuclear 35.8 71 0.0024 25.9 5.9 61 176-238 13-73 (119)
373 2hrv_A 2A cysteine proteinase; 35.5 84 0.0029 26.4 6.3 31 266-297 93-123 (142)
374 1i8f_A Putative snRNP SM-like 35.2 44 0.0015 25.0 4.3 33 176-208 22-54 (81)
375 4emk_C U6 snRNA-associated SM- 35.0 58 0.002 26.3 5.2 33 176-208 34-66 (113)
376 2m0o_A PHD finger protein 1; t 33.6 45 0.0015 25.0 3.8 36 174-209 29-64 (79)
377 1b34_B Protein (small nuclear 33.4 61 0.0021 26.2 5.2 34 175-208 39-72 (118)
378 3bw1_A SMX4 protein, U6 snRNA- 33.3 49 0.0017 25.7 4.4 32 176-207 21-52 (96)
379 2e5p_A Protein PHF1, PHD finge 33.2 1.3E+02 0.0043 21.9 6.0 37 173-209 11-47 (68)
380 3k6e_A CBS domain protein; str 31.9 22 0.00075 29.9 2.3 22 275-296 45-66 (156)
381 4emh_A Probable U6 snRNA-assoc 30.6 77 0.0026 25.2 5.2 32 176-207 27-58 (105)
382 3k6e_A CBS domain protein; str 29.2 26 0.00088 29.5 2.3 16 281-296 118-133 (156)
383 3pgw_B SM B; protein-RNA compl 28.7 59 0.002 29.7 4.6 33 176-208 15-47 (231)
384 3nqr_A Magnesium and cobalt ef 28.2 27 0.00094 27.7 2.2 20 277-296 98-117 (127)
385 1n9r_A SMF, small nuclear ribo 28.0 76 0.0026 24.5 4.6 34 175-208 31-65 (93)
386 2xk0_A Polycomb protein PCL; t 27.9 1.1E+02 0.0038 22.3 5.0 38 170-209 14-51 (69)
387 3lfr_A Putative metal ION tran 27.3 29 0.00099 28.0 2.2 20 277-296 99-118 (136)
388 3gby_A Uncharacterized protein 26.8 31 0.0011 27.4 2.2 19 278-296 99-117 (128)
389 3hf7_A Uncharacterized CBS-dom 26.5 31 0.001 27.7 2.2 20 277-296 99-118 (130)
390 3i8n_A Uncharacterized protein 26.4 31 0.0011 27.5 2.2 20 277-296 101-120 (130)
391 3by8_A Sensor protein DCUS; hi 25.6 33 0.0011 28.3 2.3 17 281-297 111-127 (142)
392 3jtf_A Magnesium and cobalt ef 25.5 31 0.0011 27.5 2.1 20 277-296 98-117 (129)
393 3d3r_A Hydrogenase assembly ch 24.6 1E+02 0.0034 24.5 4.7 45 188-235 26-72 (103)
394 2fwk_A U6 snRNA-associated SM- 24.2 65 0.0022 26.2 3.8 32 176-207 39-70 (121)
395 3kpb_A Uncharacterized protein 23.3 39 0.0013 26.2 2.2 20 277-296 92-111 (122)
396 3oco_A Hemolysin-like protein 23.2 35 0.0012 28.1 2.0 20 277-296 115-134 (153)
397 3oi8_A Uncharacterized protein 23.1 37 0.0013 28.1 2.1 20 277-296 132-151 (156)
398 3lv9_A Putative transporter; C 22.9 38 0.0013 27.6 2.1 20 277-296 117-136 (148)
399 4a4f_A SurviVal of motor neuro 22.3 2.1E+02 0.0071 20.1 6.2 35 174-208 11-46 (64)
400 1p0z_A Sensor kinase CITA; tra 22.3 47 0.0016 26.9 2.5 18 281-298 106-123 (131)
401 3lqn_A CBS domain protein; csg 22.2 42 0.0014 27.3 2.2 14 282-295 120-133 (150)
402 1m5q_A SMAP3, small nuclear ri 22.2 1.3E+02 0.0046 24.7 5.3 33 176-208 11-43 (130)
403 2nyc_A Nuclear protein SNF4; b 21.6 44 0.0015 26.7 2.3 20 277-296 113-132 (144)
404 3kxr_A Magnesium transporter, 21.3 43 0.0015 29.6 2.3 20 277-296 146-165 (205)
405 2e5q_A PHD finger protein 19; 21.3 1.6E+02 0.0053 21.1 4.6 36 174-209 10-45 (63)
406 2ef7_A Hypothetical protein ST 20.7 46 0.0016 26.3 2.2 20 277-296 97-116 (133)
407 3ctu_A CBS domain protein; str 20.7 47 0.0016 27.2 2.3 14 282-295 119-132 (156)
408 4gqw_A CBS domain-containing p 20.6 47 0.0016 26.8 2.3 20 277-296 115-134 (152)
409 3ghd_A A cystathionine beta-sy 20.5 47 0.0016 23.9 1.9 20 276-296 21-40 (70)
410 2y9a_D Small nuclear ribonucle 20.0 1.9E+02 0.0067 23.6 5.9 33 176-208 16-48 (126)
No 1
>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}
Probab=100.00 E-value=3e-57 Score=457.21 Aligned_cols=325 Identities=86% Similarity=1.272 Sum_probs=294.6
Q ss_pred cCCcchhhHHHHHHHhCCceEEEEeeeeccCccccccccccCeEEEEEEEcCCCeEEecccccCCCCcEEEEeCCCcEEE
Q 013014 110 KLQTDELATVRLFQENTPSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYD 189 (451)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~SVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHVv~~~~~i~V~~~dg~~~~ 189 (451)
...+.+.+..++++++.||||.|......++.|..+..+.+.+.||||+|+++||||||+||+.++..+.|.+.+++.++
T Consensus 11 ~~~~~e~~~~~~~~~~~~sVV~I~~~~~~~~~~~~~~~~~~~g~GSG~iI~~~G~IlT~aHvv~~~~~i~V~~~~g~~~~ 90 (348)
T 3qo6_A 11 KLQTDELATVRLFQENTPSVVYITNLAVRQDAFTLDVLEVPQGSGSGFVWDKQGHIVTNYHVIRGASDLRVTLADQTTFD 90 (348)
T ss_dssp CCCHHHHHHHHHHHHHGGGEEEEEEEEEEECSSSCCEEEEEEEEEEEEEEETTTEEEECHHHHTTCSEEEEECTTSCEEE
T ss_pred ccCcchhHHHHHHHHhCCCEEEEEEEeecccccccccccccCceEEEEEEeCCCEEEECHHHhCCCcEEEEEECCCCEEE
Confidence 45567888999999999999999998777777665555556789999999999999999999999999999999999999
Q ss_pred EEEEEEcCCCCEEEEEEcCCCCCCcceecCCCCCCCCCcEEEEeeCCCCCCCceEEeEEeeeeeeeccCCCCCCcccEEE
Q 013014 190 AKIVGFDQDKDVAVLRIDAPKDKLRPIPIGVSADLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQ 269 (451)
Q Consensus 190 a~vv~~d~~~DlAlLkv~~~~~~~~~l~l~~s~~~~~G~~V~~iG~p~g~~~~~~~G~Vs~~~~~~~~~~~~~~~~~~i~ 269 (451)
++++..|+.+||||||++.+...+++++|+++..++.|+.|+++|||++....++.|.|+.+.+.......+.....+++
T Consensus 91 a~~v~~d~~~DlAlLkl~~~~~~~~~i~l~~s~~~~~G~~v~~iG~p~g~~~~~~~g~vs~~~~~~~~~~~~~~~~~~i~ 170 (348)
T 3qo6_A 91 AKVVGFDQDKDVAVLRIDAPKNKLRPIPVGVSADLLVGQKVFAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQ 170 (348)
T ss_dssp EEEEEEEGGGTEEEEECCCCGGGCCCCCBCCSTTCCTTCEEEEEECGGGCTTEEEEEEEEEEEEEECCSSSSSCEEEEEE
T ss_pred EEEEEEcCcCCEEEEEEcCCCCCceeEEecCcccCCCCCEEEEEECCCCCCCcEeEEEEEeeccccccccCCCcccCEEE
Confidence 99999999999999999875446889999888889999999999999998889999999999887665444445567899
Q ss_pred EcccCCCCCCCCceeCCCceEEEEEeeeeCCCCCccceeEEEeccCchhhHHHhhhccccccccccceeccchhhhhhCc
Q 013014 270 TDAAINPGNSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKFGKVTRPILGIKFAPDQSVEQLGV 349 (451)
Q Consensus 270 ~d~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~~g~~~~~~lGi~~~~~~~~~~~~~ 349 (451)
+|+.+++|+|||||+|.+|+||||+++...+++...+++|+||++.+++++++|+++|++.|||||+.+.+...++.+++
T Consensus 171 ~da~i~~G~SGGPLvn~~G~vvGI~s~~~~~~~~~~g~gfaiP~~~~~~~~~~l~~~g~~~~~~lGi~~~~~~~~~~~~~ 250 (348)
T 3qo6_A 171 TDAAINPGNSGGPLLDSSGTLIGINTAIYSPSGASSGVGFSIPVDTVGGIVDQLVRFGKVTRPILGIKFAPDQSVEQLGV 250 (348)
T ss_dssp ECSCCCTTCTTCEEECTTSCEEEEEEEEECSSSSCSSCEEEEEHHHHHHHHHHHHHHSSCCCEECCCEECCTTTTTTTTC
T ss_pred EeCCcCCCCcHHHhhCCCCeEEEEEEeeecCCCCcccEEEEEEecchHHHHHHHHhCCceeeeecCcEEccchhhhhcCC
Confidence 99999999999999999999999999998776667899999999999999999999999999999999998766778888
Q ss_pred cceEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEcCCHHHHHHHHhcCCCCCEEEEEEEECCeEEEEEEEe
Q 013014 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDELLLQGIKQPPVLSDNLRL 429 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i~~~~dl~~~l~~~~~g~~v~l~v~R~g~~~~~~v~l 429 (451)
.|++|.+|.++|||+++||++..+++.+.|+.||+|++|||++|.+++|+.++|...++|++++++|+|+|+++++++++
T Consensus 251 ~Gv~V~~V~~~spA~~AGl~~~~~~~~~~l~~GDvI~~ing~~v~~~~dl~~~l~~~~~g~~v~l~v~R~g~~~~~~v~l 330 (348)
T 3qo6_A 251 SGVLVLDAPPSGPAGKAGLQSTKRDGYGRLVLGDIITSVNGTKVSNGSDLYRILDQCKVGDEVTVEVLRGDHKEKISVTL 330 (348)
T ss_dssp SSEEEEECCSSSHHHHHTCCCCEECSSSCEECCCEECEETTBCCSSSHHHHHHHTTCCTTCEEEEEEECSSSEEEEEEEC
T ss_pred ceEEEEEecCCChHHHcCCccccccccCCCCCCCEEEEECCEEeCCHHHHHHHHHhCCCcCEEEEEEEECCEEEEEEEEE
Confidence 99999999999999999999988899999999999999999999999999999988889999999999999999999998
Q ss_pred eecCC
Q 013014 430 LWSEE 434 (451)
Q Consensus 430 ~~~~~ 434 (451)
...++
T Consensus 331 ~~~~~ 335 (348)
T 3qo6_A 331 EPKPD 335 (348)
T ss_dssp EECC-
T ss_pred ccCCC
Confidence 76643
No 2
>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}
Probab=100.00 E-value=1.9e-53 Score=428.44 Aligned_cols=306 Identities=36% Similarity=0.571 Sum_probs=263.8
Q ss_pred hHHHHHHHhCCceEEEEeeeeccC------c---cccc-----cccccCeEEEEEEEcCC-CeEEecccccCCCCcEEEE
Q 013014 117 ATVRLFQENTPSVVNITNLAARQD------A---FTLD-----VLEVPQGSGSGFVWDSK-GHVVTNYHVIRGASDIRVT 181 (451)
Q Consensus 117 ~~~~~~~~~~~SVV~I~~~~~~~~------~---~~~~-----~~~~~~~~GSGfiI~~~-G~ILT~aHVv~~~~~i~V~ 181 (451)
++.++++++.||||.|.+...... . |..+ ......+.||||+|+++ ||||||+||+.++..+.|.
T Consensus 14 ~~~~~~~~~~paVV~I~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~GSGfiI~~~~G~IlTnaHVv~~~~~i~V~ 93 (345)
T 3stj_A 14 SLAPMLEKVLPAVVSVRVEGTASQGQKIPEEFKKFFGDDLPDQPAQPFEGLGSGVIINASKGYVLTNNHVINQAQKISIQ 93 (345)
T ss_dssp BSHHHHHHHGGGEEEEEEEEC------------------------CCEEEEEEEEEEETTTTEEEECHHHHTTEEEEEEE
T ss_pred CHHHHHHHhCCcEEEEEEEEeecccccCchhhhhhcccccccccCcccceeEEEEEEECCCCEEEEChHHhCCCCEEEEE
Confidence 467899999999999988764431 1 1100 00112578999999987 9999999999999999999
Q ss_pred eCCCcEEEEEEEEEcCCCCEEEEEEcCCCCCCcceecCCCCCCCCCcEEEEeeCCCCCCCceEEeEEeeeeeeeccCCCC
Q 013014 182 FADQSAYDAKIVGFDQDKDVAVLRIDAPKDKLRPIPIGVSADLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATG 261 (451)
Q Consensus 182 ~~dg~~~~a~vv~~d~~~DlAlLkv~~~~~~~~~l~l~~s~~~~~G~~V~~iG~p~g~~~~~~~G~Vs~~~~~~~~~~~~ 261 (451)
+.|++.+++++++.|+.+||||||++.+ ..+++++++++..+++|++|+++|||++...+++.|+|++..+.... .
T Consensus 94 ~~dg~~~~a~vv~~d~~~DlAlLkv~~~-~~~~~~~l~~s~~~~~G~~V~aiG~p~g~~~~vt~G~Vs~~~~~~~~---~ 169 (345)
T 3stj_A 94 LNDGREFDAKLIGSDDQSDIALLQIQNP-SKLTQIAIADSDKLRVGDFAVAVGNPFGLGQTATSGIVSALGRSGLN---L 169 (345)
T ss_dssp CTTSCEEEEEEEEEETTTTEEEEEESSC-CSCCCCCBCCGGGCCTTBEEEEEECGGGCSCEEEEEEEEEEEECCSS---S
T ss_pred eCCCcEEEEEEEEEcCCCCEEEEEEccc-CCCceEeecCcccCCCCCEEEEEECCCCCCCcEEeeEEeeecccccC---C
Confidence 9999999999999999999999999754 47899999988889999999999999999999999999998775111 1
Q ss_pred CCcccEEEEcccCCCCCCCCceeCCCceEEEEEeeeeCCCCCccceeEEEeccCchhhHHHhhhccccccccccceecc-
Q 013014 262 RPIQDVIQTDAAINPGNSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKFGKVTRPILGIKFAP- 340 (451)
Q Consensus 262 ~~~~~~i~~d~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~~g~~~~~~lGi~~~~- 340 (451)
..+..++++|+++++|+|||||+|.+|+||||+++.....++..+++|+||++.+++++++|+++|++.|+|||+.+++
T Consensus 170 ~~~~~~iq~da~i~~GnSGGPLvn~~G~vVGI~s~~~~~~~~~~g~gfaIP~~~~~~~~~~l~~~g~v~~~~lGv~~~~~ 249 (345)
T 3stj_A 170 EGLENFIQTDASINRGNSGGALLNLNGELIGINTAILAPGGGSVGIGFAIPSNMARTLAQQLIDFGEIKRGLLGIKGTEM 249 (345)
T ss_dssp SSSCCEEEECSCCCTTCTTCEEECTTSCEEEEEEEEECTTSSCSSCEEEEEHHHHHHHHHHHHHHSSCCCEECCEEEEEC
T ss_pred CCccCEEEEecccCCCcCccceeCCCCEEEEEEeccccCCCCcceeEEEEehHHHHHHHHHHHhcccccccccceeeEee
Confidence 2245789999999999999999999999999999988877777899999999999999999999999999999999886
Q ss_pred -chhhhhhCc---cceEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEcCCHHHHHHHHhcCCCCCEEEEEE
Q 013014 341 -DQSVEQLGV---SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDELLLQG 416 (451)
Q Consensus 341 -~~~~~~~~~---~Gv~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i~~~~dl~~~l~~~~~g~~v~l~v 416 (451)
.+.++.+++ .|++|.+|.++|||+++||++ ||+|++|||++|.++.|+.+++...++|++++++|
T Consensus 250 ~~~~a~~~gl~~~~G~~V~~V~~~spA~~aGL~~-----------GDvI~~ing~~v~~~~~l~~~l~~~~~g~~v~l~v 318 (345)
T 3stj_A 250 SADIAKAFNLDVQRGAFVSEVLPGSGSAKAGVKA-----------GDIITSLNGKPLNSFAELRSRIATTEPGTKVKLGL 318 (345)
T ss_dssp CHHHHHHTTCSCCSSEEEEEECTTSHHHHHTCCT-----------TCEECEETTEECSCHHHHHHHHHTSCTTCEEEEEE
T ss_pred cHHHHHhcCCCCCceEEEEEeccCChHHHcCCCC-----------CCEEEEECCEECCCHHHHHHHHHhcCCCCEEEEEE
Confidence 346777886 799999999999999999999 99999999999999999999999888999999999
Q ss_pred EECCeEEEEEEEeeecCCCcc
Q 013014 417 IKQPPVLSDNLRLLWSEERPV 437 (451)
Q Consensus 417 ~R~g~~~~~~v~l~~~~~~~~ 437 (451)
+|+|+++++++++...++...
T Consensus 319 ~R~g~~~~~~v~l~~~~~~~~ 339 (345)
T 3stj_A 319 LRNGKPLEVEVTLDTSTSSLE 339 (345)
T ss_dssp EETTEEEEEEEECEEC-----
T ss_pred EECCEEEEEEEEEcccCCCCc
Confidence 999999999999977654433
No 3
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=100.00 E-value=3.8e-51 Score=424.12 Aligned_cols=303 Identities=36% Similarity=0.577 Sum_probs=266.4
Q ss_pred hhHHHHHHHhCCceEEEEeeeeccC------c---cccc-----cccccCeEEEEEEEcCC-CeEEecccccCCCCcEEE
Q 013014 116 LATVRLFQENTPSVVNITNLAARQD------A---FTLD-----VLEVPQGSGSGFVWDSK-GHVVTNYHVIRGASDIRV 180 (451)
Q Consensus 116 ~~~~~~~~~~~~SVV~I~~~~~~~~------~---~~~~-----~~~~~~~~GSGfiI~~~-G~ILT~aHVv~~~~~i~V 180 (451)
.++.++++++.||||.|.+...... . |..+ ......+.||||||+++ ||||||+||++++.++.|
T Consensus 13 ~~~~~~~~~~~paVV~I~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~GSGfii~~~~G~IlTn~Hvv~~a~~i~V 92 (436)
T 4a8c_A 13 PSLAPMLEKVLPAVVSVRVEGTASQGQKIPEEFKKFFGDDLPDQPAQPFEGLGSGVIINASKGYVLTNNHVINQAQKISI 92 (436)
T ss_pred CCHHHHHHhhCCcEEEEEEEEeecccccCcchhhhhcccccccccCCcCceEEEEEEEECCCCEEEECHHHhCCCCEEEE
Confidence 4688999999999999988764431 1 1100 01123589999999988 999999999999999999
Q ss_pred EeCCCcEEEEEEEEEcCCCCEEEEEEcCCCCCCcceecCCCCCCCCCcEEEEeeCCCCCCCceEEeEEeeeeeeeccCCC
Q 013014 181 TFADQSAYDAKIVGFDQDKDVAVLRIDAPKDKLRPIPIGVSADLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAAT 260 (451)
Q Consensus 181 ~~~dg~~~~a~vv~~d~~~DlAlLkv~~~~~~~~~l~l~~s~~~~~G~~V~~iG~p~g~~~~~~~G~Vs~~~~~~~~~~~ 260 (451)
.+.|++.++|++++.|+.+||||||++.+ ..+++++|+++..+++|++|+++|||++...+++.|+|++..+... .
T Consensus 93 ~~~dg~~~~a~vv~~d~~~DlAllkv~~~-~~l~~~~l~~s~~~~~G~~v~aiG~P~g~~~~vt~G~vs~~~r~~~---~ 168 (436)
T 4a8c_A 93 QLNDGREFDAKLIGSDDQSDIALLQIQNP-SKLTQIAIADSDKLRVGDFAVAVGNPFGLGQTATSGIVSALGRSGL---N 168 (436)
T ss_pred EeCCCCEEEEEEEEEcCCCCEEEEEecCC-CCCceEeccCcccCCCCCEEEEEEcCCCCCccEEEEEEeeeccccc---C
Confidence 99999999999999999999999999754 4799999998888999999999999999999999999998877511 1
Q ss_pred CCCcccEEEEcccCCCCCCCCceeCCCceEEEEEeeeeCCCCCccceeEEEeccCchhhHHHhhhccccccccccceecc
Q 013014 261 GRPIQDVIQTDAAINPGNSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKFGKVTRPILGIKFAP 340 (451)
Q Consensus 261 ~~~~~~~i~~d~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~~g~~~~~~lGi~~~~ 340 (451)
...+..++++|+++++|+|||||+|.+|+||||+++.....++..+++|+||++.+++++++|+++|++.|+|||+.+++
T Consensus 169 ~~~~~~~iq~da~i~~GnSGGPl~n~~G~vvGI~~~~~~~~~~~~g~gfaIP~~~~~~~~~~l~~~g~v~r~~lGv~~~~ 248 (436)
T 4a8c_A 169 LEGLENFIQTDASINRGNAGGALLNLNGELIGINTAILAPGGGSVGIGFAIPSNMARTLAQQLIDFGEIKRGLLGIKGTE 248 (436)
T ss_pred CCCccCEEEEcCccCCCCCcCcccCCCCEEEEEEeeeccCCCCceeEEEEEehHHHHHHHHHHHhccccccccCceEecc
Confidence 12345789999999999999999999999999999988776677899999999999999999999999999999999986
Q ss_pred --chhhhhhCc---cceEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEcCCHHHHHHHHhcCCCCCEEEEE
Q 013014 341 --DQSVEQLGV---SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDELLLQ 415 (451)
Q Consensus 341 --~~~~~~~~~---~Gv~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i~~~~dl~~~l~~~~~g~~v~l~ 415 (451)
.+.++.+++ .|++|.+|.++|||+++||++ ||+|++|||++|.++.++...+....+|++++++
T Consensus 249 ~~~~~a~~~gl~~~~G~~V~~V~~~spA~~aGL~~-----------GD~I~~vnG~~v~~~~~l~~~l~~~~~g~~v~l~ 317 (436)
T 4a8c_A 249 MSADIAKAFNLDVQRGAFVSEVLPGSGSAKAGVKA-----------GDIITSLNGKPLNSFAELRSRIATTEPGTKVKLG 317 (436)
T ss_pred cCHHHHHHhCCCCCcceEEEEECCCChHHHCCCCC-----------CCEEEEECCEECCCHHHHHHHHHhcCCCCEEEEE
Confidence 346777876 699999999999999999999 9999999999999999999999887889999999
Q ss_pred EEECCeEEEEEEEeeecC
Q 013014 416 GIKQPPVLSDNLRLLWSE 433 (451)
Q Consensus 416 v~R~g~~~~~~v~l~~~~ 433 (451)
|+|+|+.+++++++....
T Consensus 318 v~R~g~~~~~~v~l~~~~ 335 (436)
T 4a8c_A 318 LLRNGKPLEVEVTLDTST 335 (436)
T ss_pred EEECCEEEEEEEEECCCC
Confidence 999999999999987654
No 4
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=100.00 E-value=5.6e-51 Score=424.11 Aligned_cols=301 Identities=38% Similarity=0.588 Sum_probs=253.3
Q ss_pred hhHHHHHHHhCCceEEEEeeeecc-----------Cccc----cc-------cccccCeEEEEEEEcCC-CeEEeccccc
Q 013014 116 LATVRLFQENTPSVVNITNLAARQ-----------DAFT----LD-------VLEVPQGSGSGFVWDSK-GHVVTNYHVI 172 (451)
Q Consensus 116 ~~~~~~~~~~~~SVV~I~~~~~~~-----------~~~~----~~-------~~~~~~~~GSGfiI~~~-G~ILT~aHVv 172 (451)
.++.++++++.||||.|.+..... ++|. .+ ......+.||||||+++ ||||||+|||
T Consensus 19 ~~~~~~~~~~~pavv~i~~~~~~~~~~~~~~~~~~~~~~~~ff~~~~~~~~~~~~~~~~~GSGfiI~~~~G~IlTn~HVv 98 (451)
T 3pv2_A 19 PSMAPVLKNIMPAIVNVAVQGYLPNDVTPPGSAGNDEENQPNNRPPQSRMPEKGRKFESIGSGVIIDPNNGVIITNDHVI 98 (451)
T ss_dssp CCSHHHHHHHGGGEEEEEEEEECCC-----------------------------CEEEEEEEEEEEETTTTEEEECHHHH
T ss_pred CCHHHHHHHhCCcEEEEEEEEeecccCCCccccccchhHHhhcccccccccccCcccceeEEEEEEECCCCEEEEChHHh
Confidence 357789999999999998875321 1111 00 01223578999999975 9999999999
Q ss_pred CCCCcEEEEeCCCcEEEEEEEEEcCCCCEEEEEEcCCCCCCcceecCCCCCCCCCcEEEEeeCCCCCC-----CceEEeE
Q 013014 173 RGASDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDAPKDKLRPIPIGVSADLLVGQKVYAIGNPFGLD-----HTLTTGV 247 (451)
Q Consensus 173 ~~~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~~~~~~~~l~l~~s~~~~~G~~V~~iG~p~g~~-----~~~~~G~ 247 (451)
+++..+.|.+.|++.++|++++.|+.+||||||++. ..++++.++++..+++|++|+++|||++.. .+++.|+
T Consensus 99 ~~a~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~--~~l~~~~l~~s~~~~~G~~V~aiG~P~G~~~~~~~~~vt~Gi 176 (451)
T 3pv2_A 99 RNASLITVTLQDGRRLKARLIGGDSETDLAVLKIDA--KNLKSLVIGDSDKLEVGDFVVAIGNPFGLNSFGNSQSATFGI 176 (451)
T ss_dssp TTEEEEEEECTTSCEEECEEEEEETTTTEEEEECCC--SSCCCCCBCCGGGCCTTCEEEEEECCCCC-----CCEEEEEE
T ss_pred CCCCEEEEEEcCCCEEEEEEEecCcCCcEEEEEEcC--cCCceeEecCcccCCCCCEEEEEECCCCccccccCCceeEEE
Confidence 999999999999999999999999999999999975 468999999888899999999999999987 8999999
Q ss_pred EeeeeeeeccCCCCCCcccEEEEcccCCCCCCCCceeCCCceEEEEEeeeeCCCCCccceeEEEeccCchhhHHHhhhcc
Q 013014 248 ISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKFG 327 (451)
Q Consensus 248 Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~~g 327 (451)
|++..+.... ...+..++++|+++++|+|||||+|.+|+||||+++...+.++..+++||||++.+++++++|+++|
T Consensus 177 vs~~~r~~~~---~~~~~~~iqtda~i~~GnSGGPl~n~~G~VIGI~t~~~~~~~~~~g~gfaIP~~~~~~~~~~l~~~g 253 (451)
T 3pv2_A 177 VSALKRSDLN---IEGVENFIQTDAAINPGNSGGALVNAKGELIGINTAILSPYGGNVGIGFAIPINMVKDVAQQIIKFG 253 (451)
T ss_dssp EEEEC-------------CCEEESSCCCGGGTTSEEEETTCCEEEEEECCC------CCCEEEEEHHHHHHHHHHHHHHS
T ss_pred EeeccccccC---CCCcceEEEEecccCCCCCcCcccCCCCeEEEEEeEeecCCCCccceeeeehhHHHHHHHHHHHhcC
Confidence 9988765111 1223578999999999999999999999999999998877666789999999999999999999999
Q ss_pred ccccccccceecc--chhhhhhCc----cceEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEcCCHHHHHH
Q 013014 328 KVTRPILGIKFAP--DQSVEQLGV----SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYR 401 (451)
Q Consensus 328 ~~~~~~lGi~~~~--~~~~~~~~~----~Gv~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i~~~~dl~~ 401 (451)
++.|+|||+.+++ .+.++.+|+ .|++|.+|.++|||+++||++ ||+|++|||++|.++.++..
T Consensus 254 ~v~r~~lGv~~~~~~~~~a~~~gl~~~~~G~~V~~V~~~spA~~aGL~~-----------GDvI~~vnG~~v~~~~~l~~ 322 (451)
T 3pv2_A 254 SIHRGLMGIFVQHLTPELAQAMGYPEDFQGALVSQVNPNSPAELAGLKA-----------GDIITQINDTKITQATQVKT 322 (451)
T ss_dssp SCCCCBCCEEEEECCHHHHHHTTSCTTCCCEEEEEECTTSHHHHHTCCT-----------TCEEEEETTEECCSHHHHHH
T ss_pred CcccccccceEEeccHHHHHhcCCCcCCceEEEEecCCCChHHHcCCCC-----------CCEEEEECCEEcCCHHHHHH
Confidence 9999999999986 446777876 599999999999999999999 99999999999999999999
Q ss_pred HHhcCCCCCEEEEEEEECCeEEEEEEEeeec
Q 013014 402 ILDQCKVGDELLLQGIKQPPVLSDNLRLLWS 432 (451)
Q Consensus 402 ~l~~~~~g~~v~l~v~R~g~~~~~~v~l~~~ 432 (451)
++...++|++++++|+|+|+++++++++...
T Consensus 323 ~l~~~~~g~~v~l~V~R~g~~~~~~v~l~~~ 353 (451)
T 3pv2_A 323 TISLLRVGSTVKIIVERDNKPLTLSAVVTDI 353 (451)
T ss_dssp HHHTSCTTCEEEEEEEETTEEEEEEEECBCH
T ss_pred HHHhcCCCCEEEEEEEECCEEEEEEEEEccC
Confidence 9998889999999999999999999988654
No 5
>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A
Probab=100.00 E-value=1e-49 Score=397.49 Aligned_cols=299 Identities=32% Similarity=0.491 Sum_probs=257.7
Q ss_pred hhHHHHHHHhCCceEEEEeeeeccCccccccccccCeEEEEEEEcCCCeEEecccccCCCCcEEEEeCCCcEEEEEEEEE
Q 013014 116 LATVRLFQENTPSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDAKIVGF 195 (451)
Q Consensus 116 ~~~~~~~~~~~~SVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHVv~~~~~i~V~~~dg~~~~a~vv~~ 195 (451)
.++.++++++.||||+|........+ +......+.||||+|+++||||||+||+.+...+.|.+.+|+.++++++.+
T Consensus 9 ~~~~~~~~~~~~sVV~I~~~~~~~~~---~~~~~~~~~gsG~iI~~~G~IlT~aHvv~~~~~i~V~~~~g~~~~a~v~~~ 85 (318)
T 1te0_A 9 ASYNLAVRRAAPAVVNVYNRGLNTNS---HNQLEIRTLGSGVIMDQRGYIITNKHVINDADQIIVALQDGRVFEALLVGS 85 (318)
T ss_dssp CCCHHHHHHHGGGEEEEEEEEECSSS---SCCEEEEEEEEEEECSTTCEEEEEHHHHTTCSEEEEECTTSCEEEEEEEEE
T ss_pred ccHHHHHHhcCCcEEEEEeEeccCCc---ccccccCccEEEEEEeCCCEEEECHHHcCCCCEEEEEeCCCCEEEEEEEEe
Confidence 45678899999999999986543321 111123578999999998999999999999999999999999999999999
Q ss_pred cCCCCEEEEEEcCCCCCCcceecCCCCCCCCCcEEEEeeCCCCCCCceEEeEEeeeeeeeccCCCCCCcccEEEEcccCC
Q 013014 196 DQDKDVAVLRIDAPKDKLRPIPIGVSADLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAIN 275 (451)
Q Consensus 196 d~~~DlAlLkv~~~~~~~~~l~l~~s~~~~~G~~V~~iG~p~g~~~~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~ 275 (451)
|+.+||||||++.+ ..+++++|+++..++.|+.|+++|||++....++.|+|+...+.... ......++++|+.++
T Consensus 86 d~~~DlAllk~~~~-~~~~~~~l~~~~~~~~G~~v~~~G~p~g~~~~~~~g~vs~~~~~~~~---~~~~~~~i~~d~~~~ 161 (318)
T 1te0_A 86 DSLTDLAVLIIKAT-GGLPTIPINARRVPHIGDVVLAIGNPYNLGQTITQGIISATGRIGLN---PTGRQNFLQTDASIN 161 (318)
T ss_dssp ETTTTEEEEECCCS-SCCCCCCCCTTCCCCTTCEEEEECCCSSSSCCEEEEEEEECCCCCCC---TTCSCCSEEESSCCC
T ss_pred CCCceEEEEEEeCC-CCCceEEeeCccCCCCCCEEEEEEcCCCCCCcEEeeEEecccccccC---CCCcCCEEEECCCCC
Confidence 99999999999865 36899999877779999999999999998889999999987654211 112356889999999
Q ss_pred CCCCCCceeCCCceEEEEEeeeeCCCC---CccceeEEEeccCchhhHHHhhhccccccccccceecc--chhhhhhCc-
Q 013014 276 PGNSGGPLLDSSGSLIGINTAIYSPSG---ASSGVGFSIPVDTVNGIVDQLVKFGKVTRPILGIKFAP--DQSVEQLGV- 349 (451)
Q Consensus 276 ~G~SGGPlvd~~G~VVGI~s~~~~~~~---~~~~~~~aIP~~~i~~~l~~l~~~g~~~~~~lGi~~~~--~~~~~~~~~- 349 (451)
+|+|||||+|.+|+||||+++...+.+ ...+++|+||++.+++++++|+++|++.++|||+.+.+ ...++.+++
T Consensus 162 ~G~SGGPl~~~~G~vvGI~s~~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~~g~~~~~~lGi~~~~~~~~~~~~~g~~ 241 (318)
T 1te0_A 162 HGNSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRVIRGYIGIGGREIAPLHAQGGGID 241 (318)
T ss_dssp TTTTTSEEECTTCCEEEEEECCSSSSSSCCSCCSCEEEEEHHHHHHHHHHHHHHSSCCCEECCEEEEECSCCCSSSSCSS
T ss_pred CCCCcCceECCCCeEEEEEeeeeccCCccccccceEEeccHHHHHHHHHHHHHcCCcccccceeEeeecchhHHHhccCC
Confidence 999999999999999999998765421 35689999999999999999999999999999999886 234566665
Q ss_pred --cceEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEcCCHHHHHHHHhcCCCCCEEEEEEEECCeEEEEEE
Q 013014 350 --SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDELLLQGIKQPPVLSDNL 427 (451)
Q Consensus 350 --~Gv~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i~~~~dl~~~l~~~~~g~~v~l~v~R~g~~~~~~v 427 (451)
.|++|.+|.++|||+++||++ ||+|++|||++|.++.|+.+++...++|++++++|+|+|+.+++++
T Consensus 242 ~~~g~~V~~V~~~spA~~aGL~~-----------GD~I~~ing~~v~~~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v 310 (318)
T 1te0_A 242 QLQGIVVNEVSPDGPAANAGIQV-----------NDLIISVDNKPAISALETMDQVAEIRPGSVIPVVVMRDDKQLTLQV 310 (318)
T ss_dssp SCCCEEEEEECTTSTTTTTCCCT-----------TCCEEEETTEECCCHHHHHHHHHTSCTTCEEEEEEESSSCEEEEEE
T ss_pred CCCcEEEEEeCCCChHHHCCCCC-----------CCEEEEECCEEcCCHHHHHHHHHhcCCCCEEEEEEEECCEEEEEEE
Confidence 799999999999999999999 9999999999999999999999887889999999999999999999
Q ss_pred Eeeec
Q 013014 428 RLLWS 432 (451)
Q Consensus 428 ~l~~~ 432 (451)
++...
T Consensus 311 ~~~~~ 315 (318)
T 1te0_A 311 TIQEY 315 (318)
T ss_dssp ECEEC
T ss_pred EEccC
Confidence 87543
No 6
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=100.00 E-value=1.4e-49 Score=417.55 Aligned_cols=292 Identities=27% Similarity=0.369 Sum_probs=245.0
Q ss_pred HhCCceEEEEeeeeccCcccccccc-ccCeEEEEEEEcCCCeEEecccccCCCCcEEEEeC-CCcEEEEEEEEEcCCCCE
Q 013014 124 ENTPSVVNITNLAARQDAFTLDVLE-VPQGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFA-DQSAYDAKIVGFDQDKDV 201 (451)
Q Consensus 124 ~~~~SVV~I~~~~~~~~~~~~~~~~-~~~~~GSGfiI~~~G~ILT~aHVv~~~~~i~V~~~-dg~~~~a~vv~~d~~~Dl 201 (451)
...+|||+|.+.....+.+..|... ...+.||||||+ +||||||+|||+++..+.|.+. ||+.|+|++++.|+.+||
T Consensus 45 ~~~~sVV~I~~~~~~~~~~~Pw~~~~~~~s~GSGfiI~-dG~IlTN~HVV~~a~~i~V~~~~dg~~~~A~vv~~D~~~DL 123 (539)
T 4fln_A 45 SFLNAVVKVYCTHTAPDYSLPWQKQRQFTSTGSAFMIG-DGKLLTNAHCVEHDTQVKVKRRGDDRKYVAKVLVRGVDCDI 123 (539)
T ss_dssp HHHTTEEEEEEEECCBCSSSTTSBCCCEEEEEEEEEEE-TTEEEECGGGGTTEEEEEEECTTCCCCEEEEEEEEETTTTE
T ss_pred ccCCCeEEEEEEecCCCCCCccccCCccceEEEEEEEE-CCEEEEChHHcCCCCeEEEEEccCCEEEEEEEEEECCCCCE
Confidence 3568999999987776655444432 235789999997 7999999999999999999984 999999999999999999
Q ss_pred EEEEEcCCC--CCCcceecCCCCCCCCCcEEEEeeCCCCCCC-ceEEeEEeeeeeeeccCCCCCCcccEEEEcccCCCCC
Q 013014 202 AVLRIDAPK--DKLRPIPIGVSADLLVGQKVYAIGNPFGLDH-TLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGN 278 (451)
Q Consensus 202 AlLkv~~~~--~~~~~l~l~~s~~~~~G~~V~~iG~p~g~~~-~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~ 278 (451)
||||++.+. ..++++.+++ .+++|++|+++|||++... +++.|+|+++.+.... .+.....+||+|+++++|+
T Consensus 124 AvLkv~~~~~~~~~~pl~~g~--~~~vGd~V~aiG~P~g~~~~tvT~GIVSa~~r~~~~--~~~~~~~~IQtDAaInpGn 199 (539)
T 4fln_A 124 ALLSVESEDFWKGAEPLRLGH--LPRLQDSVTVVGYPLGGDTISVTKGVVSRIEVTSYA--HGSSDLLGIQIDAAINPGN 199 (539)
T ss_dssp EEEEECCSSSSTTCCCCCBCC--CCCTTCEEEEEECCSSSCCCEEEEEEEEEEEEEECT--TSCCEEEEEEESSCCCTTT
T ss_pred EEEEEeCCcCCcCCceeecCC--cCcCCCeEEEEEcCCCCCCCcEEeEEECcccccccC--CCCcceeEEEEEeEecCCC
Confidence 999998643 2345566653 4678999999999998765 8999999998876433 2233346799999999999
Q ss_pred CCCceeCCCceEEEEEeeeeCCCCCccceeEEEeccCchhhHHHhhhccccc-cccccceeccc---hhhhhhCc---cc
Q 013014 279 SGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKFGKVT-RPILGIKFAPD---QSVEQLGV---SG 351 (451)
Q Consensus 279 SGGPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~~g~~~-~~~lGi~~~~~---~~~~~~~~---~G 351 (451)
|||||||.+|+||||+++.+.. ++..++|||||++.+++++++|+++|++. |||||+.+++. ..++.+++ .|
T Consensus 200 SGGPLvn~~GeVIGIntai~~~-~~~~gigfAIP~~~v~~vl~~l~~~G~~~~r~~LGv~~~~~~~~~~~~~~~l~~~~G 278 (539)
T 4fln_A 200 SGGPAFNDQGECIGVAFQVYRS-EETENIGYVIPTTVVSHFLTDYERNGKYTGYPCLGVLLQKLENPALRECLKVPTNEG 278 (539)
T ss_dssp TTSEEECSSSCEEEEECCCC------CCCEEEEEHHHHHHHHHHHHTTTSCCCCCBCCEEEEECCCHHHHHHHTCSSSBC
T ss_pred ccchhccCCCcEEEEEEEEecC-CCCCcceecccHHHHHHHHHHHHHcCeEEeeeecceEEEecCCHHHHHhcCCCCcCc
Confidence 9999999999999999987654 33568999999999999999999999987 99999998752 35677776 69
Q ss_pred eEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEcCCHHH----------HHHHHhcCCCCCEEEEEEEECCe
Q 013014 352 VLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSD----------LYRILDQCKVGDELLLQGIKQPP 421 (451)
Q Consensus 352 v~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i~~~~d----------l~~~l~~~~~g~~v~l~v~R~g~ 421 (451)
++|.+|.++|||+++ |++ ||+|++|||++|.+..+ |..++..+++|++++++|+|+|+
T Consensus 279 v~V~~V~~~spA~~a-l~~-----------GDvI~~idg~~V~~~g~~~~~~~~~~~l~~~v~~~~~Gd~v~l~v~R~Gk 346 (539)
T 4fln_A 279 VLVRRVEPTSDASKV-LKE-----------GDVIVSFDDLHVGCEGTVPFRSSERIAFRYLISQKFAGDIAEIGIIRAGE 346 (539)
T ss_dssp EEEEEECTTSGGGGT-CCT-----------TCEEEEETTEECBSSSEEECSTTCEEETHHHHHTSCTTCEEEEEEEETTE
T ss_pred eeeecccCCChHHhC-ccC-----------CCEEEEECCEEeCcCCeeccccchhHHHHHHHHcCCCCCEEEEEEEECCE
Confidence 999999999999886 998 99999999999987654 67788888999999999999999
Q ss_pred EEEEEEEeeecC
Q 013014 422 VLSDNLRLLWSE 433 (451)
Q Consensus 422 ~~~~~v~l~~~~ 433 (451)
+++++|++....
T Consensus 347 ~~~v~Vtl~~~~ 358 (539)
T 4fln_A 347 HKKVQVVLRPRV 358 (539)
T ss_dssp EEEEEEECBCCC
T ss_pred EEEEEEEEccCc
Confidence 999999997553
No 7
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=100.00 E-value=2.4e-49 Score=411.55 Aligned_cols=300 Identities=39% Similarity=0.594 Sum_probs=256.6
Q ss_pred hHHHHHHHhCCceEEEEeeeecc-----------Ccccccc--------------------------ccccCeEEEEEEE
Q 013014 117 ATVRLFQENTPSVVNITNLAARQ-----------DAFTLDV--------------------------LEVPQGSGSGFVW 159 (451)
Q Consensus 117 ~~~~~~~~~~~SVV~I~~~~~~~-----------~~~~~~~--------------------------~~~~~~~GSGfiI 159 (451)
++.++++++.||||.|.+..... ..|.... .....+.||||+|
T Consensus 14 ~~~~~~~~~~pavV~i~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GSG~ii 93 (448)
T 1ky9_A 14 SLAPMLEKVMPSVVSINVEGSTTVNTPRMPRNFQQFFGDDSPFCQEGSPFQSSPFCQGGQGGNGGGQQQKFMALGSGVII 93 (448)
T ss_dssp CSHHHHHHHGGGEEEEEEEEEEEECCCCSSCCTTCCCC---------------------------CEEEEEEEEEEEEEE
T ss_pred cHHHHHHHhCCcEEEEEEEEEecccCCccchhhhhhhccccccccccccccccccccccccccccccccccccEEEEEEE
Confidence 46789999999999998765421 0111000 0012368999999
Q ss_pred cCC-CeEEecccccCCCCcEEEEeCCCcEEEEEEEEEcCCCCEEEEEEcCCCCCCcceecCCCCCCCCCcEEEEeeCCCC
Q 013014 160 DSK-GHVVTNYHVIRGASDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDAPKDKLRPIPIGVSADLLVGQKVYAIGNPFG 238 (451)
Q Consensus 160 ~~~-G~ILT~aHVv~~~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~~~~~~~~l~l~~s~~~~~G~~V~~iG~p~g 238 (451)
+++ ||||||+||++++..+.|++.||+.++|++++.|+.+||||||++.+ ..+++++|+++..+++|++|+++|||++
T Consensus 94 ~~~~g~IlTn~HVv~~a~~i~V~~~dg~~~~a~vv~~d~~~DlAvlkv~~~-~~~~~~~l~~s~~~~~G~~V~aiG~P~g 172 (448)
T 1ky9_A 94 DADKGYVVTNNHVVDNATVIKVQLSDGRKFDAKMVGKDPRSDIALIQIQNP-KNLTAIKMADSDALRVGDYTVAIGNPFG 172 (448)
T ss_dssp ETTTTEEEEEHHHHTTEEEEEEEETTSCEEEEEEEEEETTTTEEEEEESSC-CSCCCCCBCCGGGCCTTCEEEEEECTTS
T ss_pred ECCCCEEEEChHHhCCCCEEEEEECCCCEEEEEEEEEcCCCCEEEEEecCC-CCCceEEecccccCCCCCEEEEEECCCC
Confidence 987 99999999999999999999999999999999999999999999854 4689999998888999999999999999
Q ss_pred CCCceEEeEEeeeeeeeccCCCCCCcccEEEEcccCCCCCCCCceeCCCceEEEEEeeeeCCCCCccceeEEEeccCchh
Q 013014 239 LDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNG 318 (451)
Q Consensus 239 ~~~~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~ 318 (451)
...+++.|+|++..+... ....+..++++|+++++|+|||||+|.+|+||||+++.....++..+++|+||++.+++
T Consensus 173 ~~~tvt~Givs~~~r~~~---~~~~~~~~iqtda~i~~GnSGGpl~n~~G~vvGI~~~~~~~~~~~~g~gfaIP~~~~~~ 249 (448)
T 1ky9_A 173 LGETVTSGIVSALGRSGL---NAENYENFIQTDAAINRGNAGGALVNLNGELIGINTAILAPDGGNIGIGFAIPSNMVKN 249 (448)
T ss_dssp SSCEEEEEEEEEESSCC--------CCCCEEESCCCTTSCCCSEEECTTSCEEEEEECSSTTSCCCSSSEEEEEHHHHHH
T ss_pred CCCeEEeEEEeecccccc---CCCCccCEEEEcCCCCCCCCCCeeECCCCEEEEEEEEeecCCCCccceeeeeecccchh
Confidence 989999999999876511 11224578999999999999999999999999999988776556678999999999999
Q ss_pred hHHHhhhccccccccccceecc--chhhhhhCc---cceEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEc
Q 013014 319 IVDQLVKFGKVTRPILGIKFAP--DQSVEQLGV---SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKV 393 (451)
Q Consensus 319 ~l~~l~~~g~~~~~~lGi~~~~--~~~~~~~~~---~Gv~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i 393 (451)
++++|+++|++.|+|||+.+++ .+.++.+++ .|++|.+|.+++||+++||++ ||+|++|||++|
T Consensus 250 ~~~~l~~~g~v~~~~LGv~~~~~~~~~a~~lgl~~~~G~~V~~V~~gspA~~AGL~~-----------GDvI~~inG~~v 318 (448)
T 1ky9_A 250 LTSQMVEYGQVKRGELGIMGTELNSELAKAMKVDAQRGAFVSQVLPNSSAAKAGIKA-----------GDVITSLNGKPI 318 (448)
T ss_dssp HHHHHHHHSSCCBCCCCCSCCCTTSHHHHTSCCTTCCSEECCCCTTCSSSTTTTCCT-----------TCEECBSSSSBC
T ss_pred hHHHHhhhcccceeccccccccccHHHHHHhCCCCCCceEEEEeccCCHHHHcCCCC-----------CCEEEEECCEEc
Confidence 9999999999999999999886 345777887 599999999999999999999 999999999999
Q ss_pred CCHHHHHHHHhcCCCCCEEEEEEEECCeEEEEEEEeee
Q 013014 394 SNGSDLYRILDQCKVGDELLLQGIKQPPVLSDNLRLLW 431 (451)
Q Consensus 394 ~~~~dl~~~l~~~~~g~~v~l~v~R~g~~~~~~v~l~~ 431 (451)
.++.++..++...++|++++++|+|+|+.+++++++..
T Consensus 319 ~~~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~~~ 356 (448)
T 1ky9_A 319 SSFAALRAQVGTMPVGSKLTLGLLRDGKQVNVNLELQQ 356 (448)
T ss_dssp CSSHHHHHHTTSSBTTCCCEEEEESSSCEEECCCC---
T ss_pred CCHHHHHHHHHhcCCCCEEEEEEEECCEEEEEEEEEec
Confidence 99999999998777899999999999999888877643
No 8
>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A
Probab=100.00 E-value=1.7e-47 Score=382.43 Aligned_cols=289 Identities=35% Similarity=0.557 Sum_probs=248.9
Q ss_pred hhHHHHHHHhCCceEEEEeeeeccCccccccccccCeEEEEEEEcCCCeEEecccccCCCC---------cEEEEeCCCc
Q 013014 116 LATVRLFQENTPSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKGHVVTNYHVIRGAS---------DIRVTFADQS 186 (451)
Q Consensus 116 ~~~~~~~~~~~~SVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHVv~~~~---------~i~V~~~dg~ 186 (451)
.++.++++++.||||+|..... ...+.||||+|+++||||||+||+.+.. .+.|.+.+++
T Consensus 6 ~~~~~~~~~~~~svV~I~~~~~-----------~~~~~gsG~iI~~~g~ILT~aHvv~~~~~~~~~~~~~~i~V~~~~g~ 74 (324)
T 1y8t_A 6 GSVEQVAAKVVPSVVMLETDLG-----------RQSEEGSGIILSAEGLILTNNHVIAAAAKPPLGSPPPKTTVTFSDGR 74 (324)
T ss_dssp CCHHHHHHHHGGGEEEEEEEC---------------CEEEEEECCTTSEEEEEHHHHTTCC--------CEEEEEETTCC
T ss_pred ccHHHHHHHhcCcEEEEEEEcc-----------CCCceEEEEEEeCCCEEEEChHHcCCcccccccCCceEEEEEeCCCC
Confidence 4577899999999999987432 1356899999998899999999998875 7999999999
Q ss_pred EEEEEEEEEcCCCCEEEEEEcCCCCCCcceecCCCCCCCCCcEEEEeeCCCCCCCceEEeEEeeeeeeeccCC-CC--CC
Q 013014 187 AYDAKIVGFDQDKDVAVLRIDAPKDKLRPIPIGVSADLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAA-TG--RP 263 (451)
Q Consensus 187 ~~~a~vv~~d~~~DlAlLkv~~~~~~~~~l~l~~s~~~~~G~~V~~iG~p~g~~~~~~~G~Vs~~~~~~~~~~-~~--~~ 263 (451)
.++++++.+|+.+||||||++.+ ..++++.|+++..++.|+.|+++|||++....++.|+|+...+...... .+ ..
T Consensus 75 ~~~a~vv~~d~~~DlAllkl~~~-~~~~~~~l~~~~~~~~G~~v~~~G~p~g~~~~~~~G~vs~~~~~~~~~~~~g~~~~ 153 (324)
T 1y8t_A 75 TAPFTVVGADPTSDIAVVRVQGV-SGLTPISLGSSSDLRVGQPVLAIGSPLGLEGTVTTGIVSALNRPVSTTGEAGNQNT 153 (324)
T ss_dssp EECEEEEECCTTTTEEEEEECSC-CSCCCCEECCSTTCCTTCEEEEEECGGGCTTEEEEEEEEEEEEEECC-------CC
T ss_pred EEEEEEEEeCCCCCEEEEEECCC-CCCceEEecCcccCCCCCEEEEEEcCCCCCCcEeeeEEeecccccccccccCcccc
Confidence 99999999999999999999875 4689999987777899999999999999888899999998876543211 01 12
Q ss_pred cccEEEEcccCCCCCCCCceeCCCceEEEEEeeeeCCC-------CCccceeEEEeccCchhhHHHhhhccccccccccc
Q 013014 264 IQDVIQTDAAINPGNSGGPLLDSSGSLIGINTAIYSPS-------GASSGVGFSIPVDTVNGIVDQLVKFGKVTRPILGI 336 (451)
Q Consensus 264 ~~~~i~~d~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~-------~~~~~~~~aIP~~~i~~~l~~l~~~g~~~~~~lGi 336 (451)
...++++++.+++|+|||||+|.+|+||||+++..... ++..+++|+||++.+++++++|+++|++.++|||+
T Consensus 154 ~~~~i~~d~~~~~G~SGGPlv~~~G~vvGI~s~~~~~~~~~~~~~~~~~g~~~aIP~~~v~~~l~~l~~~g~~~~~~lGi 233 (324)
T 1y8t_A 154 VLDAIQTDAAINPGNSGGALVNMNAQLVGVNSAIATLGADSADAQSGSIGLGFAIPVDQAKRIADELISTGKASHASLGV 233 (324)
T ss_dssp CEEEEEECSCCCTTCTTEEEECTTSEEEEEEEEECCC-------CCCCSSCEEEEEHHHHHHHHHHHHHHSCCCCEECCE
T ss_pred cCCEEEEcCCCCCCCccCcEECCCCeEEEEEeeecccCcccccccccccceEEecCHHHHHHHHHHHHHcCCccccccce
Confidence 35789999999999999999999999999999876542 23468999999999999999999999999999999
Q ss_pred eeccchhhhhhCccceEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEcCCHHHHHHHHhcCCCCCEEEEEE
Q 013014 337 KFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDELLLQG 416 (451)
Q Consensus 337 ~~~~~~~~~~~~~~Gv~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i~~~~dl~~~l~~~~~g~~v~l~v 416 (451)
.+.... ...|++|.+|.+++||+++||++ ||+|++|||++|.++.|+..++...++|++++++|
T Consensus 234 ~~~~~~-----~~~g~~V~~v~~~spA~~aGl~~-----------GD~I~~ing~~v~~~~~l~~~l~~~~~g~~v~l~v 297 (324)
T 1y8t_A 234 QVTNDK-----DTLGAKIVEVVAGGAAANAGVPK-----------GVVVTKVDDRPINSADALVAAVRSKAPGATVALTF 297 (324)
T ss_dssp EEESCS-----SSSSEEEEEECTTSTTTTTTCCT-----------TCEEEEETTEECCSHHHHHHHHHTSCTTCEEEEEE
T ss_pred Eeeecc-----CCCceEEEEECCCChHHHcCCCC-----------CCEEEEECCEECCCHHHHHHHHHhcCCCCEEEEEE
Confidence 987532 13789999999999999999999 99999999999999999999998777899999999
Q ss_pred EE-CCeEEEEEEEeeec
Q 013014 417 IK-QPPVLSDNLRLLWS 432 (451)
Q Consensus 417 ~R-~g~~~~~~v~l~~~ 432 (451)
+| +|+.+++++++...
T Consensus 298 ~R~~g~~~~~~v~~~~~ 314 (324)
T 1y8t_A 298 QDPSGGSRTVQVTLGKA 314 (324)
T ss_dssp ECSSCCEEEEEEECEEC
T ss_pred EECCCCEEEEEEEEccC
Confidence 99 99999999988654
No 9
>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1
Probab=100.00 E-value=1.2e-47 Score=383.72 Aligned_cols=291 Identities=32% Similarity=0.514 Sum_probs=237.6
Q ss_pred hhHHHHHHHhCCceEEEEeeeeccCccccccccccCeEEEEEEEcCCCeEEecccccCCCCcEEEEeCCCcEEEEEEEEE
Q 013014 116 LATVRLFQENTPSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDAKIVGF 195 (451)
Q Consensus 116 ~~~~~~~~~~~~SVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHVv~~~~~i~V~~~dg~~~~a~vv~~ 195 (451)
....++++++.||||+|...... +|. ......+.||||+|+++||||||+||+.++..+.|++.+|+.++++++..
T Consensus 15 ~~~~~~~~~~~~sVV~I~~~~~~--~~~--~~~~~~~~gsG~iI~~~G~IlT~aHvv~~~~~i~V~~~~g~~~~a~v~~~ 90 (325)
T 1lcy_A 15 NFIADVVEKTAPAVVYIEILDRH--PFL--GREVPISNGSGFVVAADGLIVTNAHVVADRRRVRVRLLSGDTYEAVVTAV 90 (325)
T ss_dssp CHHHHHHHHHGGGEEEEEEEEEE--TTT--TEEEEEEEEEEEEEETTTEEEECHHHHTTCSEEEEECTTSCEEEEEEEEE
T ss_pred hHHHHHHHHhCCcEEEEEEEecC--ccC--CCccccccEEEEEEeCCCEEEECHHHcCCCCEEEEEeCCCCEEEEEEEEE
Confidence 45678999999999999875421 111 11123478999999999999999999999999999999999999999999
Q ss_pred cCCCCEEEEEEcCCCCCCcceecCCCCCCCCCcEEEEeeCCCCCCCceEEeEEeeeeeeeccCCCCCCcccEEEEcccCC
Q 013014 196 DQDKDVAVLRIDAPKDKLRPIPIGVSADLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAIN 275 (451)
Q Consensus 196 d~~~DlAlLkv~~~~~~~~~l~l~~s~~~~~G~~V~~iG~p~g~~~~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~ 275 (451)
|+.+||||||++.+ ..+++++|+++..++.|++|+++|||.+....++.|+|+...+.............++++|+.++
T Consensus 91 d~~~DlAllkl~~~-~~~~~~~l~~~~~~~~G~~v~~~G~p~~~~~~v~~G~vs~~~~~~~~~g~~~~~~~~i~~d~~~~ 169 (325)
T 1lcy_A 91 DPVADIATLRIQTK-EPLPTLPLGRSADVRQGEFVVAMGSPFALQNTITSGIVSSAQRPARDLGLPQTNVEYIQTDAAID 169 (325)
T ss_dssp ETTTTEEEEECCCS-SCCCCCCBCCGGGCCTTCEEEECCCTTSSSSCCEEEEBCSCSCC---------CCCCEEESSCCS
T ss_pred CCCCCEEEEEEcCC-CCCceEEecccccCCCCCEEEEEECCCCCCCcEEeEEEecccccccccCCCCCCCCEEEEcCCCC
Confidence 99999999999864 36899999877678999999999999998889999999987654221111112356899999999
Q ss_pred CCCCCCceeCCCceEEEEEeeeeCCCCCccceeEEEeccCchhhHHHhhhc------cccccccccceecc--chhhhhh
Q 013014 276 PGNSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKF------GKVTRPILGIKFAP--DQSVEQL 347 (451)
Q Consensus 276 ~G~SGGPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~~------g~~~~~~lGi~~~~--~~~~~~~ 347 (451)
+|+|||||+|.+|+||||+++... .+++|+||++.++++++++.+. +++.++|||+.+.+ ...++.+
T Consensus 170 ~G~SGGPl~~~~G~vVGI~s~~~~-----~g~~~aip~~~i~~~l~~~~~~~~~~g~~~~~r~~lGv~~~~l~~~~~~~~ 244 (325)
T 1lcy_A 170 FGNAGGPLVNLDGEVIGVNTMKVT-----AGISFAIPSDRLREFLHRGEKKNSSSGISGSQRRYIGVMMLTLSPSILAEL 244 (325)
T ss_dssp TTTTTSEEEETTSCEEEEEEEEEE-----TTEEEEEEHHHHHHHTCC---------------EECCEEEEECCHHHHHHH
T ss_pred CCCccccEECCCCEEEEEEeEeec-----CCeeEEEEHHHHHHHHHHhhhcccccccccccccccceEeecCCHHHHHhh
Confidence 999999999999999999998753 4699999999999999998764 46789999999875 2344555
Q ss_pred Cc---------cceEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEcCCHHHHHHHHhcCCCCCEEEEEEEE
Q 013014 348 GV---------SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDELLLQGIK 418 (451)
Q Consensus 348 ~~---------~Gv~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i~~~~dl~~~l~~~~~g~~v~l~v~R 418 (451)
++ .|++|.+|.++|||+++||++ ||+|++|||++|.+++|+.+++.. ++++.++|.|
T Consensus 245 ~l~~~~~~~~~~gv~V~~V~~~spA~~aGl~~-----------GDvI~~ing~~v~~~~~l~~~l~~---~~~v~l~v~R 310 (325)
T 1lcy_A 245 QLREPSFPDVQHGVLIHKVILGSPAHRAGLRP-----------GDVILAIGEQMVQNAEDVYEAVRT---QSQLAVQIRR 310 (325)
T ss_dssp TTSCTTSCCCSSCEEEEEECTTSHHHHHTCCT-----------TCEEEEETTEECCSHHHHHHHHTT---CSSEEEEEEE
T ss_pred CccccccccCCCCeEEEEeCcCChHHHCCCCC-----------CCEEEEECCEEcCCHHHHHHHHhC---CCeEEEEEEE
Confidence 54 599999999999999999999 999999999999999999999874 6889999999
Q ss_pred CCeEEEEEEEee
Q 013014 419 QPPVLSDNLRLL 430 (451)
Q Consensus 419 ~g~~~~~~v~l~ 430 (451)
+|+.+++++++.
T Consensus 311 ~g~~~~~~v~~~ 322 (325)
T 1lcy_A 311 GRETLTLYVTPE 322 (325)
T ss_dssp TTEEEEEEECCE
T ss_pred CCEEEEEEEEEe
Confidence 999999988764
No 10
>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A
Probab=100.00 E-value=1.5e-47 Score=384.09 Aligned_cols=297 Identities=31% Similarity=0.495 Sum_probs=160.7
Q ss_pred cchhhHHHHHHHhCCceEEEEeeeeccCccccccccccCeEEEEEEEcCCCeEEecccccCCCCcEEEEeCCCcEEEEEE
Q 013014 113 TDELATVRLFQENTPSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDAKI 192 (451)
Q Consensus 113 ~~~~~~~~~~~~~~~SVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHVv~~~~~i~V~~~dg~~~~a~v 192 (451)
.......++++++.||||+|...... .| +..+...+.||||+|+++||||||+||+.++..+.|.+.+++.+++++
T Consensus 11 ~~~~~~~~~~~~~~~sVV~I~~~~~~--~~--~~~~~~~~~GSG~iI~~~G~ILTaaHvv~~~~~i~V~~~~g~~~~a~~ 86 (332)
T 3num_A 11 HKYNFIADVVEKIAPAVVHIELFRKL--PF--SKREVPVASGSGFIVSEDGLIVTNAHVVTNKHRVKVELKNGATYEAKI 86 (332)
T ss_dssp HHHCHHHHHHHHHGGGEEEEEEEEEC--TT--SSCEEEEEEEEEEEEETTTEEEECTTTCCTTSEEEEEETTSCEEEEEE
T ss_pred cccchHHHHHHHhcCcEEEEEEEecc--cc--CCCcceeeeEEEEEEeCCCEEEEChHHcCCCCEEEEEECCCCEEEEEE
Confidence 34466788999999999999875422 11 111234578999999999999999999999999999999999999999
Q ss_pred EEEcCCCCEEEEEEcCCCCCCcceecCCCCCCCCCcEEEEeeCCCCCCCceEEeEEeeeeeeeccCCCCCCcccEEEEcc
Q 013014 193 VGFDQDKDVAVLRIDAPKDKLRPIPIGVSADLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDA 272 (451)
Q Consensus 193 v~~d~~~DlAlLkv~~~~~~~~~l~l~~s~~~~~G~~V~~iG~p~g~~~~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~d~ 272 (451)
+..|+.+||||||++.+ ..++++.++++..++.|+.|+++|||++...+++.|.++...+.............++++++
T Consensus 87 ~~~d~~~DlAlL~l~~~-~~~~~~~l~~~~~~~~G~~v~~~G~p~g~~~~~~~g~vs~~~~~~~~~~~~~~~~~~i~~d~ 165 (332)
T 3num_A 87 KDVDEKADIALIKIDHQ-GKLPVLLLGRSSELRPGEFVVAIGSPFSLQNTVTTGIVSTTQRGGKELGLRNSDMDYIQTDA 165 (332)
T ss_dssp EEEETTTTEEEEEECCS-SCCCCCCBCCTTSCCTTCEEEEECC-----CCEEEEEEEEC--------------CCEEESS
T ss_pred EEecCCCCeEEEEEcCC-CCCceeeecCcccCCCCCEEEEEECCCCCCcceeeeEEEeecccccccCcCCCcCCEEEEEC
Confidence 99999999999999865 46888999887789999999999999998889999999887664332211122346789999
Q ss_pred cCCCCCCCCceeCCCceEEEEEeeeeCCCCCccceeEEEeccCchhhHHHhhh-----ccccccccccceeccch--hhh
Q 013014 273 AINPGNSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK-----FGKVTRPILGIKFAPDQ--SVE 345 (451)
Q Consensus 273 ~i~~G~SGGPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~-----~g~~~~~~lGi~~~~~~--~~~ 345 (451)
.+++|+|||||+|.+|+||||+++... .+++|+||++.++++++++.+ .+.+.++|||+.+.+.. .++
T Consensus 166 ~i~~G~SGGPlv~~~G~vvGI~s~~~~-----~g~~~aip~~~i~~~l~~~~~~~~~g~~~~~r~~lGi~~~~~~~~~~~ 240 (332)
T 3num_A 166 IINYGNAGGPLVNLDGEVIGINTLKVT-----AGISFAIPSDKIKKFLTESHDRQAKGKAITKKKYIGIRMMSLTSSKAK 240 (332)
T ss_dssp CCCTTTTTSEEEETTSCEEEEEEEEEE-----TTEEEEEEHHHHHHHHHHHCC---------------------------
T ss_pred CcCCCCcHHHhhCCCCcEEEEEeeEec-----ccceEEECHHHHHHHHHHHhhhhccCcccccccccceEEEecCHHHhh
Confidence 999999999999999999999998753 469999999999999999864 23456899999987522 222
Q ss_pred hh-----C----ccceEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEcCCHHHHHHHHhcCCCCCEEEEEE
Q 013014 346 QL-----G----VSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDELLLQG 416 (451)
Q Consensus 346 ~~-----~----~~Gv~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i~~~~dl~~~l~~~~~g~~v~l~v 416 (451)
.+ + ..|++|.+|.++|||+++||++ ||+|++|||++|.++.|+..++.. |++++++|
T Consensus 241 ~~~~~~~~~~~~~~g~~V~~v~~~spA~~aGl~~-----------GD~I~~ing~~v~~~~~~~~~l~~---~~~v~l~v 306 (332)
T 3num_A 241 ELKDRHRDFPDVISGAYIIEVIPDTPAEAGGLKE-----------NDVIISINGQSVVSANDVSDVIKR---ESTLNMVV 306 (332)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hhhhhccccCCCCCceEEEEeccCCChHHcCCCC-----------CCEEEEECCEECCCHHHHHHHHhC---CCeEEEEE
Confidence 22 1 2699999999999999999999 999999999999999999988863 88999999
Q ss_pred EECCeEEEEEEEeeecC
Q 013014 417 IKQPPVLSDNLRLLWSE 433 (451)
Q Consensus 417 ~R~g~~~~~~v~l~~~~ 433 (451)
+|+|+++++++++..++
T Consensus 307 ~R~g~~~~~~v~p~~~~ 323 (332)
T 3num_A 307 RRGNEDIMITVIPEEID 323 (332)
T ss_dssp -----------------
T ss_pred EECCEEEEEEEEEeeec
Confidence 99999999999876554
No 11
>1l1j_A Heat shock protease HTRA; hydrolase, serine proteinase; 2.80A {Thermotoga maritima} SCOP: b.47.1.1
Probab=100.00 E-value=5.2e-38 Score=300.46 Aligned_cols=220 Identities=40% Similarity=0.672 Sum_probs=172.1
Q ss_pred hhHHHHHHHhCCceEEEEeeeeccC--------ccc----cc---ccccc-CeEEEEEEEcCCCeEEecccccCCCCcEE
Q 013014 116 LATVRLFQENTPSVVNITNLAARQD--------AFT----LD---VLEVP-QGSGSGFVWDSKGHVVTNYHVIRGASDIR 179 (451)
Q Consensus 116 ~~~~~~~~~~~~SVV~I~~~~~~~~--------~~~----~~---~~~~~-~~~GSGfiI~~~G~ILT~aHVv~~~~~i~ 179 (451)
.++.++++++.||||.|.+...... +|. .. ..... .+.||||+|+++||||||+||+.++..+.
T Consensus 4 ~~~~~~~~~~~psVV~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsG~iI~~~g~ILTnaHvv~~~~~i~ 83 (239)
T 1l1j_A 4 SPIVNVVEACAPAVVKIDVVKTVKTSFFDPYFEQFFKKWFGELPPGFERQVASLGSGFIFDPEGYILTNYHVVGGADNIT 83 (239)
T ss_dssp CHHHHHHHHHGGGEEEEEEECC--CCCCCHHHHHHHHHHCTTSCTTHHHHEEEEEEEEEEETTTEEEEEHHHHSSCSSCE
T ss_pred hhHHHHHHHhCCCEEEEEEEEeecccccccccchhhhhhccccccccccccCceEEEEEEeCCCEEEEChHHhCCCCEEE
Confidence 3577899999999999988654321 110 00 01112 57899999998899999999999999999
Q ss_pred EEeCCCcEEEEEEEEEcCCCCEEEEEEcCCCCCCcceecCCCCCCCCCcEEEEeeCCCCCCCceEEeEEeeeeeeeccCC
Q 013014 180 VTFADQSAYDAKIVGFDQDKDVAVLRIDAPKDKLRPIPIGVSADLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAA 259 (451)
Q Consensus 180 V~~~dg~~~~a~vv~~d~~~DlAlLkv~~~~~~~~~l~l~~s~~~~~G~~V~~iG~p~g~~~~~~~G~Vs~~~~~~~~~~ 259 (451)
|.+.||+.++++++..|+.+||||||++.+...+++++|+++..+++|++|+++|||.+...+++.|+|++..+......
T Consensus 84 V~~~~g~~~~a~vv~~d~~~DlAllkl~~~~~~~~~~~l~~s~~~~~G~~v~~iG~p~g~~~~vt~Givs~~~r~~~~~~ 163 (239)
T 1l1j_A 84 VTMLDGSKYDAEYIGGDEELDIAVIKIKASDKKFPYLEFGDSDKVKIGEWAIAIGNPLGFQHTVTVGVVSATNRRIPKPD 163 (239)
T ss_dssp EECTTSCEEEBCCCEEETTTTEEEEEBCCSSSCCCCCEECCGGGCCTTCEEEEEECTTSSSCEEEEEEEEEEEEEEECTT
T ss_pred EEECCCCEEEEEEEEEcCCCCEEEEEEcCCCCCCceEEecCccCCccccEEEEEECCCCCCCcEEEEEEeccccccccCC
Confidence 99999999999999999999999999986424689999987777899999999999999888999999998877643211
Q ss_pred CCCCcccEEEEcccCCCCCCCCceeCCCceEEEEEeeeeCCCCCccceeEEEeccCchhhHHHhhhccccccccccc
Q 013014 260 TGRPIQDVIQTDAAINPGNSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKFGKVTRPILGI 336 (451)
Q Consensus 260 ~~~~~~~~i~~d~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~~g~~~~~~lGi 336 (451)
.......++++|+.+++|+|||||+|.+|+||||+++... .++..+++|+||++.+++++++|+++|++.|+|||+
T Consensus 164 ~~~~~~~~i~tda~i~~G~SGGPLv~~~G~vvGI~s~~~~-~~~~~g~~faIP~~~~~~~~~~l~~~g~v~r~~lGv 239 (239)
T 1l1j_A 164 GSGYYVGLIQTDAAINPGNSGGPLLNIHGEVIGINTAIVN-PQEAVNLGFAIPINTVKKFLDTILTQKKVEKAYLGV 239 (239)
T ss_dssp SSCEEEEEEEESSCCCTTTTTSEEECSSSEEEEEECCCSC-CCSCCSCEEEEEHHHHHHHHGGGCC-----------
T ss_pred CccccCCEEEECCCCCCCCccHHhccCCCeEEEEEeeeec-CCCcCceEEEEEHHHHHHHHHHHHHCCCCccceeCc
Confidence 1112457899999999999999999999999999998765 344568999999999999999999999999999996
No 12
>3sti_A Protease DEGQ; serine protease, PDZ domain, chaperone, hydrolase; 2.60A {Escherichia coli}
Probab=100.00 E-value=3.7e-37 Score=295.41 Aligned_cols=213 Identities=40% Similarity=0.652 Sum_probs=163.9
Q ss_pred hHHHHHHHhCCceEEEEeeeeccC------c---cccc-----cccccCeEEEEEEEcCC-CeEEecccccCCCCcEEEE
Q 013014 117 ATVRLFQENTPSVVNITNLAARQD------A---FTLD-----VLEVPQGSGSGFVWDSK-GHVVTNYHVIRGASDIRVT 181 (451)
Q Consensus 117 ~~~~~~~~~~~SVV~I~~~~~~~~------~---~~~~-----~~~~~~~~GSGfiI~~~-G~ILT~aHVv~~~~~i~V~ 181 (451)
++.++++++.||||.|.+...... . |... ......+.||||||+++ ||||||+||++++..+.|.
T Consensus 14 ~~~~~~~~~~paVV~I~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~GSGfiI~~~~G~IlTnaHvv~~a~~i~V~ 93 (245)
T 3sti_A 14 SLAPMLEKVLPAVVSVRVEGTASQGQKIPEEFKKFFGDDLPDQPAQPFEGLGSGVIINASKGYVLTNNHVINQAQKISIQ 93 (245)
T ss_dssp BSHHHHHHHGGGEEEC----------------------------------CCEEEEEETTTTEEEECGGGC----CEEEE
T ss_pred CHHHHHHHhCCceEEEEEEEeeccccccchhhhhhccccccccccccccceEEEEEEeCCCCEEEEcHHHhCCCCEEEEE
Confidence 567899999999999988654431 1 1100 00112578999999988 9999999999999999999
Q ss_pred eCCCcEEEEEEEEEcCCCCEEEEEEcCCCCCCcceecCCCCCCCCCcEEEEeeCCCCCCCceEEeEEeeeeeeeccCCCC
Q 013014 182 FADQSAYDAKIVGFDQDKDVAVLRIDAPKDKLRPIPIGVSADLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATG 261 (451)
Q Consensus 182 ~~dg~~~~a~vv~~d~~~DlAlLkv~~~~~~~~~l~l~~s~~~~~G~~V~~iG~p~g~~~~~~~G~Vs~~~~~~~~~~~~ 261 (451)
+.|++.++++++..|+.+||||||++.+ ..+++++|+++..+++|++|+++|||++...+++.|+|++..+... ..
T Consensus 94 ~~dg~~~~a~vv~~d~~~DlAlLkv~~~-~~~~~~~l~~s~~~~~G~~v~aiG~P~g~~~~vt~G~vs~~~~~~~---~~ 169 (245)
T 3sti_A 94 LNDGREFDAKLIGSDDQSDIALLQIQNP-SKLTQIAIADSDKLRVGDFAVAVGNPFGLGQTATSGIVSALGRSGL---NL 169 (245)
T ss_dssp CTTSCEEEEEEEEEETTTTEEEEEESSC-CSCCCCCBCCGGGCCTTBEEEEEECGGGSCCEEEEEEEEECSSCSS---CC
T ss_pred ECCCCEEEEEEEEecCCCCEEEEEeccC-CCCceeeecCcCCCCCCCEEEEEECCCCCCCcEEeeEEeeeccccc---CC
Confidence 9999999999999999999999999754 4689999988878999999999999999999999999998876511 11
Q ss_pred CCcccEEEEcccCCCCCCCCceeCCCceEEEEEeeeeCCCCCccceeEEEeccCchhhHHHhhhcccccccc
Q 013014 262 RPIQDVIQTDAAINPGNSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKFGKVTRPI 333 (451)
Q Consensus 262 ~~~~~~i~~d~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~~g~~~~~~ 333 (451)
.....++++|+.+++|+|||||||.+|+||||+++.....++..+++||||++.+++++++|+++|++.++|
T Consensus 170 ~~~~~~i~tda~i~~G~SGGPLvn~~G~vVGI~s~~~~~~~~~~g~~faIP~~~~~~~~~~l~~~g~~~~~~ 241 (245)
T 3sti_A 170 EGLENFIQTDASINRGNSGGALLNLNGELIGINTAILAPGGGSVGIGFAIPSNMARTLAQQLIDFGEILEHH 241 (245)
T ss_dssp TTCSSCEEESSCCCTTTTTSEEECTTSCEEEEEECCC------CCCEEEEEHHHHHHHHHHHHHHHHHC---
T ss_pred CCccCEEEEcCCcCCCcchhHeecCCCeEEEEEEeEECCCCCcceEEEEEeHHHHHHHHHHHHHcCCCCCcc
Confidence 223567999999999999999999999999999998776666789999999999999999999999987765
No 13
>3lgi_A Protease DEGS; stress-sensor, HTRA, PDZ OMP, hydrolase, serine PR; 1.65A {Escherichia coli} PDB: 2qf3_A 2qf0_A 2rce_A* 3lh3_A* 3b8j_A 2qgr_A 3lh1_A 3lgy_A 3lgu_A 3lgv_A 3lgw_A 3lgt_A 2r3u_A
Probab=100.00 E-value=4e-35 Score=280.23 Aligned_cols=213 Identities=37% Similarity=0.557 Sum_probs=178.0
Q ss_pred hhhHHHHHHHhCCceEEEEeeeeccCccccccccccCeEEEEEEEcCCCeEEecccccCCCCcEEEEeCCCcEEEEEEEE
Q 013014 115 ELATVRLFQENTPSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDAKIVG 194 (451)
Q Consensus 115 ~~~~~~~~~~~~~SVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHVv~~~~~i~V~~~dg~~~~a~vv~ 194 (451)
..++.++++++.||||+|......... .......+.||||+|+++||||||+||+.+...+.|.+.+++.++++++.
T Consensus 19 ~~~~~~~~~~~~~sVV~I~~~~~~~~~---~~~~~~~~~GsG~ii~~~G~IlTaaHvv~~~~~~~V~~~~g~~~~a~vv~ 95 (237)
T 3lgi_A 19 PASYNLAVRRAAPAVVNVYNRGLNTNS---HNQLEIRTLGSGVIMDQRGYIITNKHVINDADQIIVALQDGRVFEALLVG 95 (237)
T ss_dssp CCBCHHHHHHHGGGEEEEEEECCTTTC---TTSCCEEEEEEEEEEETTTEEEEEHHHHTTCSEEEEECTTSCEEEEEEEE
T ss_pred CcCHHHHHHHhCCcEEEEEEEecccCc---ccccccceEEEEEEEeCCCEEEEeeeecCCCCEEEEEeCCCCEEEEEEEE
Confidence 345678899999999999986544321 01112347899999999999999999999999999999999999999999
Q ss_pred EcCCCCEEEEEEcCCCCCCcceecCCCCCCCCCcEEEEeeCCCCCCCceEEeEEeeeeeeeccCCCCCCcccEEEEcccC
Q 013014 195 FDQDKDVAVLRIDAPKDKLRPIPIGVSADLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAI 274 (451)
Q Consensus 195 ~d~~~DlAlLkv~~~~~~~~~l~l~~s~~~~~G~~V~~iG~p~g~~~~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i 274 (451)
.|+.+||||||++.+. .+++++|+++..++.|+.|+++|||++....++.|+|+...+..... .....++++|+.+
T Consensus 96 ~d~~~DlAll~l~~~~-~~~~~~l~~~~~~~~G~~v~~~G~p~~~~~~~~~g~vs~~~~~~~~~---~~~~~~i~~d~~i 171 (237)
T 3lgi_A 96 SDSLTDLAVLKINATG-GLPTIPINARRVPHIGDVVLAIGNPYNLGQTITQGIISATGRIGLNP---TGRQNFLQTDASI 171 (237)
T ss_dssp EETTTTEEEEECCCSS-CCCCCCCCTTCCCCTTBEEEEEECGGGSCSEEEEEEEEEECCSSCCT---TSCSCCEEECSCC
T ss_pred EcCCCCEEEEEecCCC-CCceEeccCcccCCCCCEEEEEECCCCCCCcEEEEEEEecccccccC---CCcCCEEEEcCcc
Confidence 9999999999998653 58899998777899999999999999988899999999877653221 2235679999999
Q ss_pred CCCCCCCceeCCCceEEEEEeeeeCCCC---CccceeEEEeccCchhhHHHhhhccccccccc
Q 013014 275 NPGNSGGPLLDSSGSLIGINTAIYSPSG---ASSGVGFSIPVDTVNGIVDQLVKFGKVTRPIL 334 (451)
Q Consensus 275 ~~G~SGGPlvd~~G~VVGI~s~~~~~~~---~~~~~~~aIP~~~i~~~l~~l~~~g~~~~~~l 334 (451)
++|+|||||+|.+|+||||+++.+.... ...+++||||++.+++++++|+++|+..++|+
T Consensus 172 ~~G~SGGPlv~~~G~vvGI~s~~~~~~~~~~~~~g~~~aip~~~i~~~~~~l~~~g~~~~~~~ 234 (237)
T 3lgi_A 172 NHGNSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRVIRHHH 234 (237)
T ss_dssp CTTCTTCEEECTTCCEEEEECCCCCCCTTSCCCCSCEEEEEHHHHHHHHHHHHHHSSCCC---
T ss_pred CCCCchHHeeCCCCeEEEEEeeeeccCCCCcCcCceEEEEEHHHHHHHHHHHHHcCCCCCchh
Confidence 9999999999999999999998765533 45689999999999999999999999987664
No 14
>3tjo_A Serine protease HTRA1; peptidase, hydrolase; HET: BOG; 2.30A {Homo sapiens} PDB: 3tjn_A 3nwu_A
Probab=100.00 E-value=1.5e-33 Score=268.38 Aligned_cols=202 Identities=36% Similarity=0.579 Sum_probs=164.7
Q ss_pred chhhHHHHHHHhCCceEEEEeeeeccCccccccccccCeEEEEEEEcCCCeEEecccccCCCCcEEEEeCCCcEEEEEEE
Q 013014 114 DELATVRLFQENTPSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDAKIV 193 (451)
Q Consensus 114 ~~~~~~~~~~~~~~SVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHVv~~~~~i~V~~~dg~~~~a~vv 193 (451)
......++++++.||||+|...... +|. ......+.||||+|+++||||||+||+.+...+.|.+.+++.++++++
T Consensus 29 ~~~~~~~~~~~~~~sVV~I~~~~~~--~~~--~~~~~~~~GSG~iI~~~G~VLTaaHvv~~~~~i~V~~~~g~~~~a~v~ 104 (231)
T 3tjo_A 29 KYNFIADVVEKIAPAVVHIELFRKL--PFS--KREVPVASGSGFIVSEDGLIVTNAHVVTNKHRVKVELKNGATYEAKIK 104 (231)
T ss_dssp HSCHHHHHHHHHGGGEEEEEEEEEC--TTS--SCEEEEEEEEEEECSTTCEEEEETTTCCSSSEEEEECTTSCEEEEEEE
T ss_pred hhhHHHHHHHHhcCcEEEEEEEecc--ccC--CCccccceEEEEEEeCCCEEEEchhcccCCceEEEEcCCCCEEEEEEE
Confidence 3456778999999999999876532 111 111234789999999989999999999999999999999999999999
Q ss_pred EEcCCCCEEEEEEcCCCCCCcceecCCCCCCCCCcEEEEeeCCCCCCCceEEeEEeeeeeeeccCCCCCCcccEEEEccc
Q 013014 194 GFDQDKDVAVLRIDAPKDKLRPIPIGVSADLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAA 273 (451)
Q Consensus 194 ~~d~~~DlAlLkv~~~~~~~~~l~l~~s~~~~~G~~V~~iG~p~g~~~~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~ 273 (451)
..|+.+||||||++.+ ..++++.|+++..++.|+.|+++|||++....++.|.|+...+.............++++|+.
T Consensus 105 ~~d~~~DlAlL~l~~~-~~~~~~~l~~~~~~~~G~~v~~~G~p~g~~~~~~~g~vs~~~~~~~~~~~~~~~~~~i~~da~ 183 (231)
T 3tjo_A 105 DVDEKADIALIKIDHQ-GKLPVLLLGRSSELRPGEFVVAIGSPFSLQNTVTTGIVSTTQRGGKELGLRNSDMDYIQTDAI 183 (231)
T ss_dssp EEETTTTEEEEECCCS-SCCCCCCBCCGGGCCTTCEEEEEEEEETTEEEEEEEEEEECC-------------CCEEESSC
T ss_pred EecCCCCEEEEEecCC-CCCCceecCCcCCCCCCCEEEEEECCCCCCCceeeEEEeeccccccccccCCCcccEEEEcCC
Confidence 9999999999999865 468899998777789999999999999888889999998876653322112223467899999
Q ss_pred CCCCCCCCceeCCCceEEEEEeeeeCCCCCccceeEEEeccCchhhHHHhhh
Q 013014 274 INPGNSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (451)
Q Consensus 274 i~~G~SGGPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (451)
+++|+|||||+|.+|+||||+++... .+++||||++.++++++++++
T Consensus 184 i~~G~SGGPLv~~~G~vVGI~s~~~~-----~g~~~aip~~~i~~~l~~~~~ 230 (231)
T 3tjo_A 184 INYGNAGGPLVNLDGEVIGINTLKVT-----AGISFAIPSDKIKKFLTESHD 230 (231)
T ss_dssp CCTTTTTSEEECTTSCEEEEEEEEEE-----TTEEEEEEHHHHHHHHHHHHT
T ss_pred cCCCCchhHeecCCCeEEEEEeEEec-----CCeEEEEEHHHHHHHHHHHhh
Confidence 99999999999999999999998753 469999999999999999875
No 15
>3k6y_A Serine protease, possible membrane-associated serine protease; oxidative stress, disulfide, BENT helix, HY protease; 1.30A {Mycobacterium tuberculosis} PDB: 3k6z_A 3lt3_A
Probab=99.97 E-value=2.6e-30 Score=246.71 Aligned_cols=198 Identities=28% Similarity=0.419 Sum_probs=161.8
Q ss_pred hhHHHHHHHhCCceEEEEeeeeccCccccccccccCeEEEEEEEcCCCeEEecccccCCCCcEEEEeCCCcEEEEEEEEE
Q 013014 116 LATVRLFQENTPSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDAKIVGF 195 (451)
Q Consensus 116 ~~~~~~~~~~~~SVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHVv~~~~~i~V~~~dg~~~~a~vv~~ 195 (451)
....++++++++|||+|....... ...+.||||+|+ +||||||+||+.+...+.|.+.+ ..+.++++..
T Consensus 31 ~~~~~~~~~~~~svV~I~~~~~~~---------~~~~~GsG~iI~-~~~VlTaaH~v~~~~~~~V~~~~-~~~~~~~v~~ 99 (237)
T 3k6y_A 31 LVNNPVVAATEPSVVKIRSLAPRC---------QKVLEGTGFVIS-PDRVMTNAHVVAGSNNVTVYAGD-KPFEATVVSY 99 (237)
T ss_dssp GGGCHHHHHHGGGEEEEEEEEGGG---------TEEEEEEEEEEE-TTEEEECGGGTTTCSEEEEEETT-EEEECEEEEE
T ss_pred cccHHHHHHhcCCEEEEEEEecCC---------CcceeEEEEEEE-CCEEEECHHHcCCCceEEEEECC-cEEEEEEEEE
Confidence 344678999999999998754322 125689999999 68999999999999999999988 4899999999
Q ss_pred cCCCCEEEEEEcCCCCCCcceecCCCCCCCCCcEEEEeeCCCCCCCceEEeEEeeeeeeeccCC--CCC-CcccEEEEcc
Q 013014 196 DQDKDVAVLRIDAPKDKLRPIPIGVSADLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAA--TGR-PIQDVIQTDA 272 (451)
Q Consensus 196 d~~~DlAlLkv~~~~~~~~~l~l~~s~~~~~G~~V~~iG~p~g~~~~~~~G~Vs~~~~~~~~~~--~~~-~~~~~i~~d~ 272 (451)
|+.+||||||++. ..++++.|+ +..+..|+.++++|||++.....+.|.++...+...... ... ....++++++
T Consensus 100 ~~~~DiAll~l~~--~~~~~~~l~-~~~~~~G~~v~v~G~p~g~~~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (237)
T 3k6y_A 100 DPSVDVAILAVPH--LPPPPLVFA-AEPAKTGADVVVLGYPGGGNFTATPARIREAIRLSGPDIYGDPEPVTRDVYTIRA 176 (237)
T ss_dssp ETTTTEEEEECTT--CCSCCCCBC-SSCCCTTCEEEEEECGGGCSCEEEEEEEEEEEEEEECCTTCCSSCEEEEEEEEES
T ss_pred cCCCCEEEEEeCC--CCCCceecC-CCCCCCCCEEEEEECCCCCCCccceeEEEeeEeecccccccCCCcccccEEEecC
Confidence 9999999999985 468899997 567899999999999998888888888876655433211 111 2346789999
Q ss_pred cCCCCCCCCceeCCCceEEEEEeeeeCCCCCccceeEEEeccCchhhHHHhhhccccc
Q 013014 273 AINPGNSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKFGKVT 330 (451)
Q Consensus 273 ~i~~G~SGGPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~~g~~~ 330 (451)
.+++|+|||||+|.+|+||||+++.... ..+++|+||++.++++++++.....+.
T Consensus 177 ~~~~GdSGGPLv~~~G~vvGI~s~~~~~---~~~~~~aip~~~v~~~l~~~~~~~~v~ 231 (237)
T 3k6y_A 177 DVEQGDSGGPLIDLNGQVLGVVFGAAID---DAETGFVLTAGEVAGQLAKIGATQPVG 231 (237)
T ss_dssp CCCTTCTTCEEECTTSCEEEEEEEECSS---STTEEEEEEHHHHHGGGGGTTCCSCCC
T ss_pred ccCCCccHHHEECCCCEEEEEEEeeccC---CCcEEEEEEHHHHHHHHHHccCCCCCC
Confidence 9999999999999999999999987543 346999999999999999996555443
No 16
>2w5e_A Putative serine protease; coiled coil, transmembrane, thiol protease, RNA replication, ribosomal frameshifting, catalytic triad, membrane; 2.00A {Human astrovirus 1}
Probab=99.91 E-value=2.9e-23 Score=186.47 Aligned_cols=138 Identities=21% Similarity=0.324 Sum_probs=106.5
Q ss_pred cCeEEEEEEEcCCCeEEecccccCCCCcEEEEeCCCcEEEEEEEEEcCCCCEEEEEEcCCCCCCcceecCCCCCCCCCcE
Q 013014 150 PQGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDAPKDKLRPIPIGVSADLLVGQK 229 (451)
Q Consensus 150 ~~~~GSGfiI~~~G~ILT~aHVv~~~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~~~~~~~~l~l~~s~~~~~G~~ 229 (451)
..+.||||+| +||||||+||++++..+.|++ |++.++|+++ .|+..||||||++.....+++++++++.. .+.
T Consensus 19 ~~~~GSGfii--~g~IlTn~HVV~~~~~i~V~~-dg~~~~a~vv-~d~~~DlAlLkv~~~~~~~~~l~l~~~~~---~~~ 91 (163)
T 2w5e_A 19 PEGKGTGFFS--GNDIVTAAHVVGNNTFVNVCY-EGLMYEAKVR-YMPEKDIAFITCPGDLHPTARLKLSKNPD---YSC 91 (163)
T ss_dssp TTEEEEEEEE--TTEEEEEHHHHTTCSEEEEEE-TTEEEEEEEE-ECCSSSEEEEECCTTCCCSCCCCBCSSCC---TTE
T ss_pred CceeEEEEEE--CCEEEecHHHhCCCceEEEEE-CCEEEEEEEE-EECCCCEEEEEecCCCCCcceEEcCCCCC---CCE
Confidence 4679999999 689999999999999999999 9999999999 89999999999986543456677875533 489
Q ss_pred EEEeeCCCCCCCceEEeEEeeeeeeeccCCCCCCcccEEEEcccCCCCCCCCceeCCCceEEEEEeeeeCCCCCccceeE
Q 013014 230 VYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGSLIGINTAIYSPSGASSGVGF 309 (451)
Q Consensus 230 V~~iG~p~g~~~~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~~~~~~~~~ 309 (451)
|+++|||.+. . .++...... ..+.+.+++++++|+|||||||.+|+||||+++... ..+ +|
T Consensus 92 v~~~G~p~~~---~---~~s~~~~~~--------~g~~~~~~a~i~pGnSGGPl~n~~G~VVGI~~~~~g----~~g-g~ 152 (163)
T 2w5e_A 92 VTVMAYVNED---L---VVSTAAAMV--------YGNTLSYAVRTQDGMSGAPVCDKYCRVLAVHQTNTG----YTG-GA 152 (163)
T ss_dssp EEEEEEETTE---E---EEEEEEEEE--------ETTEEEEECSCSSCCTTCEEECTTSCEEEEEEEEET----TEE-EE
T ss_pred EEEEEeCCCC---E---EEEEeccEE--------cCCeEEEEEEeCCCCchhhEEcCCCEEEEEEccCcc----ccc-CE
Confidence 9999999652 1 111111111 124567789999999999999999999999987532 334 67
Q ss_pred EEec
Q 013014 310 SIPV 313 (451)
Q Consensus 310 aIP~ 313 (451)
+|..
T Consensus 153 ai~~ 156 (163)
T 2w5e_A 153 VIID 156 (163)
T ss_dssp EECC
T ss_pred EEec
Confidence 7643
No 17
>2as9_A Serine protease; trypsin-like fold, hydrolase; 1.70A {Staphylococcus aureus}
Probab=99.86 E-value=1.2e-21 Score=183.23 Aligned_cols=159 Identities=25% Similarity=0.452 Sum_probs=124.1
Q ss_pred CeEEEEEEEcCCCeEEecccccCCCC---cEEEEe----CCCcEEEEE-EEEEcCCCCEEEEEEcCCC-----------C
Q 013014 151 QGSGSGFVWDSKGHVVTNYHVIRGAS---DIRVTF----ADQSAYDAK-IVGFDQDKDVAVLRIDAPK-----------D 211 (451)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHVv~~~~---~i~V~~----~dg~~~~a~-vv~~d~~~DlAlLkv~~~~-----------~ 211 (451)
...|+||+|++ +|||||+||+.+.. .+.|.. .+++.+.++ ++.+|+..||||||++.+. .
T Consensus 22 ~~~c~G~lI~~-~~VLTaaHcv~~~~~~~~i~v~~~~~~~~g~~~~~~~v~~~~~~~DiAll~l~~~~~~~~~~~~~~~~ 100 (210)
T 2as9_A 22 FKDATGFVIGK-NTIITNKHVSKDYKVGDRITAHPNGDKGNGGIYKIKSISDYPGDEDISVMNIEEQAVERGPKGFNFNE 100 (210)
T ss_dssp CSSCEEEEEET-TEEEECHHHHHHCCTTCEEEESCCGGGCCSCEEEEEEEEECSSSSSCEEEEECSEEEEEETTEEEGGG
T ss_pred eeeEEEEEEeC-CEEEECHhHCCccCCCCEEEEEeCcccCCCCEEEEEEEEeCCCCCcEEEEEecCcccccccccccccc
Confidence 35799999996 69999999997654 566653 477888885 7788889999999998621 1
Q ss_pred CCcceecCCCCCCCCCcEEEEeeCCCCCCCc----eEEeEEeeeeeeeccCCCCCCcccEEEEcccCCCCCCCCceeCCC
Q 013014 212 KLRPIPIGVSADLLVGQKVYAIGNPFGLDHT----LTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSS 287 (451)
Q Consensus 212 ~~~~l~l~~s~~~~~G~~V~~iG~p~g~~~~----~~~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPlvd~~ 287 (451)
.++++.|. ..+..|+.++++|||.+.... +..|.++... ...+++++.+++|+|||||+|.+
T Consensus 101 ~v~~i~l~--~~~~~g~~v~v~G~p~~~~~~~~l~~~~g~v~~~~------------~~~i~~~~~~~~GdSGGPlv~~~ 166 (210)
T 2as9_A 101 NVQAFNFA--KDAKVDDKIKVIGYPLPAQNSFKQFESTGTIKRIK------------DNILNFDAYIEPGNSGSPVLNSN 166 (210)
T ss_dssp SCCCCCBC--SCCCTTCEEEEEECSSTTTTTSCCEEEEEEEEEEE------------TTEEEEECCCCTTCTTCEEECTT
T ss_pred ccceeecC--CCCCCCCEEEEEeCCCCCCCCcceEEeeeEEcccc------------CCeEEEcCccCCCCccCcEECCC
Confidence 35677774 357899999999999865433 3566666431 24678899999999999999989
Q ss_pred ceEEEEEeeeeCCCCCccceeEEEeccCchhhHHHhhh
Q 013014 288 GSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (451)
Q Consensus 288 G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (451)
|+||||+++.....+ ....+|++|.+.+++++++...
T Consensus 167 g~lvGI~s~g~~~~~-~~~~~~~~~~~~i~~f~~~~~~ 203 (210)
T 2as9_A 167 NEVIGVVYGGIGKIG-SEYNGAVYFTPQIKDFIQKHIE 203 (210)
T ss_dssp SCEEEEECCSCCCTT-CSSEEEEECCHHHHHHHHTTCC
T ss_pred CeEEEEEecccccCC-ccccccEEEcHHHHHHHHHhhh
Confidence 999999998765443 4567899999999999987653
No 18
>1agj_A Epidermolytic toxin A; hydrolase, serine protease; 1.70A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dua_A 1exf_A 1due_A
Probab=99.86 E-value=3.6e-21 Score=183.63 Aligned_cols=161 Identities=26% Similarity=0.440 Sum_probs=119.3
Q ss_pred CeEEEEEEEcCCCeEEecccccCCCCc--EEEEeCCC-------------cEEEEEEEEEcC---CCCEEEEEEcCCCC-
Q 013014 151 QGSGSGFVWDSKGHVVTNYHVIRGASD--IRVTFADQ-------------SAYDAKIVGFDQ---DKDVAVLRIDAPKD- 211 (451)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHVv~~~~~--i~V~~~dg-------------~~~~a~vv~~d~---~~DlAlLkv~~~~~- 211 (451)
...|+||+|++ +||||||||+.+... +.|.+.+| ..+.++.+..|+ .+||||||++.+..
T Consensus 54 ~~~c~G~lI~~-~~VLTAaHcv~~~~~~~~~v~~~~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~DiAll~l~~~~~~ 132 (242)
T 1agj_A 54 QTSATGVLIGK-NTVLTNRHIAKFANGDPSKVSFRPSINTDDNGNTETPYGEYEVKEILQEPFGAGVDLALIRLKPDQNG 132 (242)
T ss_dssp TEEEEEEECSS-SEEEECHHHHGGGTTCGGGEEEEETCEECTTSCEECTTCCEEEEEEESCTTCTTSCCEEEEECCCTTS
T ss_pred CccEEEEEEeC-CEEEEChhhcccCCCCceEEEEecCccccccccccccCCceeEEEEEeCCCCCCCcEEEEEEcCCCcc
Confidence 46899999986 599999999976543 34444332 347888888888 88999999987531
Q ss_pred -----CCcceecCCCCCCCCCcEEEEeeCCCCCCCc-eEEeEEeeeeeeeccCCCCCCcccEEEEcccCCCCCCCCceeC
Q 013014 212 -----KLRPIPIGVSADLLVGQKVYAIGNPFGLDHT-LTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLD 285 (451)
Q Consensus 212 -----~~~~l~l~~s~~~~~G~~V~~iG~p~g~~~~-~~~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPlvd 285 (451)
.++++.|.++..+..|+.++++|||.+.... .....+... . ....+++++.+++|+|||||++
T Consensus 133 ~~~~~~v~~i~L~~~~~~~~g~~~~v~Gwg~~~~~~~l~~~~~~~~-----~------~~~~~~~~~~~c~GdSGGPl~~ 201 (242)
T 1agj_A 133 VSLGDKISPAKIGTSNDLKDGDKLELIGYPFDHKVNQMHRSEIELT-----T------LSRGLRYYGFTVPGNSGSGIFN 201 (242)
T ss_dssp CCHHHHSCCCEECCSTTCCTTCEEEEEECCTTTSTTCCEEEEEEEC-----C------GGGSEEEECCCCGGGTTCEEEC
T ss_pred ccccccccceecCccccCCCCCEEEEEeCCCCCCCccceeeeeeEe-----c------CCceEEEeCCcCCCCCchHhcc
Confidence 3788899766668899999999999775532 222222111 1 1234678899999999999999
Q ss_pred CCceEEEEEeeeeCCCCCccceeEEEecc-CchhhHHHh
Q 013014 286 SSGSLIGINTAIYSPSGASSGVGFSIPVD-TVNGIVDQL 323 (451)
Q Consensus 286 ~~G~VVGI~s~~~~~~~~~~~~~~aIP~~-~i~~~l~~l 323 (451)
.+|+||||+++.....+...+.+|++|+. .+++++++.
T Consensus 202 ~~g~lvGI~s~g~~c~~~~~~~~~~~~i~~~~~~~l~~~ 240 (242)
T 1agj_A 202 SNGELVGIHSSKVSHLDREHQINYGVGIGNYVKRIINEK 240 (242)
T ss_dssp TTSEEEEEEEEEEECSSTTCEEEEEEECCHHHHHHHHHH
T ss_pred cCCEEEEEEeccccccCcCCCceeeEEehHHHHHHHHhh
Confidence 89999999998765332446789999996 777777663
No 19
>2l97_A HTRA, putative serine protease; HTRA-PDZ, protein binding; NMR {Streptococcus pneumoniae}
Probab=99.83 E-value=1.3e-20 Score=163.91 Aligned_cols=116 Identities=33% Similarity=0.513 Sum_probs=105.3
Q ss_pred cceeEEEeccCchhhHHHhhhccccccccccceeccc-----hhhhhhCc-----cceEEEecCCCCcccccCceeeecc
Q 013014 305 SGVGFSIPVDTVNGIVDQLVKFGKVTRPILGIKFAPD-----QSVEQLGV-----SGVLVLDAPPNGPAGKAGLLSTKRD 374 (451)
Q Consensus 305 ~~~~~aIP~~~i~~~l~~l~~~g~~~~~~lGi~~~~~-----~~~~~~~~-----~Gv~V~~v~~~s~a~~aGl~~~~~~ 374 (451)
+++|||||++.+++++++|+++|++.|+|||+.+.+. ..++.+|+ .|++|.+|.++|||+ +||++
T Consensus 2 ~GigFAIP~~~~~~v~~~L~~~G~v~r~~LGv~~~~~~~~~~~~~~~lgl~~~~~~g~~V~~V~~~spA~-aGL~~---- 76 (134)
T 2l97_A 2 EGLGFAIPANDAINIIEQLEKNGKVTRPALGIQMVNLSNVSTSDIRRLNIPSNVTSGVIVRSVQSNMPAN-GHLEK---- 76 (134)
T ss_dssp CCCCCCCCCCCCCCCCCCCCCCCCSSCCCCCCEEEESSSSCHHHHHHHSSCSSSCSCEEEEECSTTSGGG-TTSCS----
T ss_pred CcEEEEeEHHHHHHHHHHHHHcCCEeeeEeeEEEEECCchhHHHHHHcCCCcCCCCCEEEEEECCCCchH-HCCCC----
Confidence 4799999999999999999999999999999998752 34566775 589999999999999 99999
Q ss_pred cCCCCCCCcEEEEECCEEcCCHHHHHHHHhcCCCCCEEEEEEEECCeEEEEEEEeeec
Q 013014 375 AYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDELLLQGIKQPPVLSDNLRLLWS 432 (451)
Q Consensus 375 ~~~~L~~GDiIl~vnG~~i~~~~dl~~~l~~~~~g~~v~l~v~R~g~~~~~~v~l~~~ 432 (451)
||+|++|||++|.++.++.+++...++|++++++|.|+|+.+++++++...
T Consensus 77 -------GD~I~~inG~~v~~~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~~~~ 127 (134)
T 2l97_A 77 -------YDVITKVDDKEIASSTDLQSALYNHSIGDTIKITYYRNGKEETTSIKLNKL 127 (134)
T ss_dssp -------SCEEEEETTEECCCHHHHHHHHHHSSTTCEEEEEEEETTEEEEEEEECCCC
T ss_pred -------CCEEEEECCEEcCCHHHHHHHHHhCCCCCEEEEEEEECCEEEEEEEEEccc
Confidence 999999999999999999999988778999999999999999999987543
No 20
>2h5c_A Alpha-lytic protease; serine protease, acylation transition STAT catalysis, protein folding, protein stability, packing DIST hydrolase; HET: SO4; 0.82A {Lysobacter enzymogenes} SCOP: b.47.1.1 PDB: 1p02_A 1p03_A 1p04_A 1p05_A 1p06_A* 1p01_A 1p11_E 1p12_E 1qrx_A* 1tal_A 2alp_A 1ssx_A* 2h5d_A* 2ull_A 3qgj_A* 9lpr_A 1boq_A 1gbj_A 1gbk_A 1gbl_A ...
Probab=99.82 E-value=1.1e-19 Score=168.33 Aligned_cols=158 Identities=20% Similarity=0.231 Sum_probs=121.9
Q ss_pred EEEEEEEcCC--CeEEecccccCCCCcEEEEeCCCcEEEEEEEEEc-CCCCEEEEEEcCCCCCCcc-------eecCCCC
Q 013014 153 SGSGFVWDSK--GHVVTNYHVIRGASDIRVTFADQSAYDAKIVGFD-QDKDVAVLRIDAPKDKLRP-------IPIGVSA 222 (451)
Q Consensus 153 ~GSGfiI~~~--G~ILT~aHVv~~~~~i~V~~~dg~~~~a~vv~~d-~~~DlAlLkv~~~~~~~~~-------l~l~~s~ 222 (451)
..+||+++++ +|||||+||+++...+. .|+ .+.++++..| +..|+||||++.+....+. +.+..+.
T Consensus 17 CT~Gf~v~~~~~~~ilTa~Hc~~~~~~v~---~~~-~~~g~vv~~~~~~~D~Avi~i~~~~~~~~~v~~~g~~~~v~g~~ 92 (198)
T 2h5c_A 17 CSVGFSVTRGATKGFVTAGHCGTVNATAR---IGG-AVVGTFAARVFPGNDRAWVSLTSAQTLLPRVANGSSFVTVRGST 92 (198)
T ss_dssp EECCEEEEETTEEEEEECGGGCCTTCEEE---ETT-EEEEEEEEEECSBSCEEEEEECTTSEEEEEEEETTEEEECCBCC
T ss_pred CCcCEEEecCCeeEEEECcccCCCCCEEE---eCC-cEEEEEEecCCCCCCEEEEEeCCCCccCceEecCCceEEecCcc
Confidence 3479999753 68999999999888776 454 8889999999 9999999999864211222 2345567
Q ss_pred CCCCCcEEEEeeCCCCCCCceEEeEEeeeeeeeccCCCCCCcccEEEEcccCCCCCCCCceeCCCceEEEEEeeee-CCC
Q 013014 223 DLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGSLIGINTAIY-SPS 301 (451)
Q Consensus 223 ~~~~G~~V~~iG~p~g~~~~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPlvd~~G~VVGI~s~~~-~~~ 301 (451)
.+++|+.|+.+|+|.+ .+.|+|+++.+.... ..+ .+..+++++..+.+|+|||||+|.+|++|||+++.. ...
T Consensus 93 ~~~vG~~V~~~G~~tg----~t~G~V~~~~~~~~~-~~g-~~~~~i~t~~~~~~GDSGGPl~~~~g~~vGI~s~~~~~~~ 166 (198)
T 2h5c_A 93 EAAVGAAVCRSGRTTG----YQCGTITAKNVTANY-AEG-AVRGLTQGNACMGRGDSGGSWITSAGQAQGVMSGGNVQSN 166 (198)
T ss_dssp CCCTTCEEEEEETTTE----EEEEEEEEEEEEEEE-TTE-EEEEEEEECSCCBTTCTTCEEECTTCBEEEEEEEECCCTT
T ss_pred cCCCCCeEEEeecCcc----eEEEEEEeeeeEEEe-CCC-eEeeeEEecccCCCCcceeEEEeeCCEEEEEEEeecCccC
Confidence 7999999999999876 689999999886442 111 245689999999999999999999999999999873 221
Q ss_pred -C-----CccceeEEEeccCchhhH
Q 013014 302 -G-----ASSGVGFSIPVDTVNGIV 320 (451)
Q Consensus 302 -~-----~~~~~~~aIP~~~i~~~l 320 (451)
+ ...+++|++|++.+++.+
T Consensus 167 ~~~c~~~~~~g~~f~~Pi~~vl~~~ 191 (198)
T 2h5c_A 167 GNNCGIPASQRSSLFERLQPILSQY 191 (198)
T ss_dssp SBSTTSCGGGCCEEEEEHHHHHHHH
T ss_pred CCccccccCCceEEEEEHHHHHHHC
Confidence 1 234789999998776544
No 21
>2w7s_A Serine protease SPLA; hydrolase, family S1; 1.80A {Staphylococcus aureus} PDB: 2w7u_A
Probab=99.81 E-value=6.5e-20 Score=169.72 Aligned_cols=155 Identities=25% Similarity=0.396 Sum_probs=111.0
Q ss_pred eEEEEEEEcCCCeEEecccccCCCCc----EEEEe----CCCcEEEE-EEEEEcCCCCEEEEEEcCCC-------CCCcc
Q 013014 152 GSGSGFVWDSKGHVVTNYHVIRGASD----IRVTF----ADQSAYDA-KIVGFDQDKDVAVLRIDAPK-------DKLRP 215 (451)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHVv~~~~~----i~V~~----~dg~~~~a-~vv~~d~~~DlAlLkv~~~~-------~~~~~ 215 (451)
..|+||+|++ +||||||||+.+... +.+.. .+++.+.+ +++.+|+.+||||||++.+. ..+++
T Consensus 22 ~~c~G~lI~~-~~VLTaaHcv~~~~~~~~~v~v~~~~~~~~~~~~~~~~i~~~~~~~DiAll~l~~~~~~~~~~~~~v~p 100 (200)
T 2w7s_A 22 VGGTGVVVGK-NTIVTNKHIAKSNDIFKNRVSAHHSSKGKGGGNYDVKDIVEYPGKEDLAIVHVHETSTEGLNFNKNVSY 100 (200)
T ss_dssp TTEEEEEEET-TEEEECHHHHHHHHHTTCCEEETCCSSSCCCCEECEEEEEECSSSSSCEEEEECSBCTTSCBGGGSCCC
T ss_pred ceEEEEEEEC-CEEEEChhhcCCcccCCcEEEEEecCccCCCcEEEEEEEecCCCcceEEEEEECCCCCCcccccccccc
Confidence 4699999986 599999999975433 55543 46777887 47788889999999998641 13567
Q ss_pred eecCCCCCCCCCcEEEEeeCCCCCCCc----eEEeEEeeeeeeeccCCCCCCcccEEEEcccCCCCCCCCceeCCCceEE
Q 013014 216 IPIGVSADLLVGQKVYAIGNPFGLDHT----LTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGSLI 291 (451)
Q Consensus 216 l~l~~s~~~~~G~~V~~iG~p~g~~~~----~~~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPlvd~~G~VV 291 (451)
+.|. ..+..|+.++++|||++.... +..|.++... ..++++++.+++|+|||||++.+|+||
T Consensus 101 i~l~--~~~~~g~~v~v~G~p~g~~~~~~~~~~~g~v~~~~------------~~~~~~~~~~~~GdSGGPl~~~~g~lv 166 (200)
T 2w7s_A 101 TKFA--DGAKVKDRISVIGYPKGAQTKYKMFESTGTINHIS------------GTFMEFDAYAQPGNSGSPVLNSKHELI 166 (200)
T ss_dssp CCBC--CCCCTTCEEEEEECTTHHHHTSCEEEEEEEEEEEE------------TTEEEECSCCCTTCTTCEEECTTSCEE
T ss_pred eecc--ccCCCCCEEEEEECCCCCCCccceEEeEEEEEccC------------CCEEEEcceeCCCCccCeEECcCCEEE
Confidence 7774 357889999999999864322 3556665421 245788999999999999999899999
Q ss_pred EEEeeeeCCCCCccceeEEE-eccCchhhHHHh
Q 013014 292 GINTAIYSPSGASSGVGFSI-PVDTVNGIVDQL 323 (451)
Q Consensus 292 GI~s~~~~~~~~~~~~~~aI-P~~~i~~~l~~l 323 (451)
||+++....+ ....+|++ ....+++|+++.
T Consensus 167 GI~s~g~~~~--~~~~~~~v~~~~~~~~wI~~~ 197 (200)
T 2w7s_A 167 GILYAGSGKD--ESEKNFGVYFTPQLKEFIQNN 197 (200)
T ss_dssp EEEEEEC------CCCEEEEECCHHHHHHHHHT
T ss_pred EEEeccccCC--CCccceeeecHHHHHHHHHhh
Confidence 9999875421 12344555 335566666554
No 22
>2o8l_A V8 protease, taphylococcal serine; serine protease, enzyme, hydrolase; 1.50A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1qy6_A
Probab=99.80 E-value=1.6e-18 Score=168.56 Aligned_cols=158 Identities=20% Similarity=0.311 Sum_probs=115.3
Q ss_pred CeEEEEEEEcCCCeEEecccccCCCCc----EEEEe--------CCCcEEEEEEEEEcCCCCEEEEEEcCCC------CC
Q 013014 151 QGSGSGFVWDSKGHVVTNYHVIRGASD----IRVTF--------ADQSAYDAKIVGFDQDKDVAVLRIDAPK------DK 212 (451)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHVv~~~~~----i~V~~--------~dg~~~~a~vv~~d~~~DlAlLkv~~~~------~~ 212 (451)
...|+||+|+++ ||||||||+.+... +.|.+ .+++....+++..+..+||||||++.+. ..
T Consensus 33 ~~~C~G~lI~~~-~VLTAAHCv~~~~~~~~~i~V~~G~~~~~~~~~g~~~~~~i~~~~~~~DIALLkL~~~~~~~~~~~~ 111 (274)
T 2o8l_A 33 TFIASGVVVGKD-TLLTNKHVVDATHGDPHALKAFPSAINQDNYPNGGFTAEQITKYSGEGDLAIVKFSPNEQNKHIGEV 111 (274)
T ss_dssp EEEEEEEEEETT-EEEECHHHHHTTTTCGGGEEEEETCCBTTBCTTCCEEEEEEEECSSSSCCEEEEECCCTTSCCTTTS
T ss_pred CEEEEEEEEECC-EEEEChhhCcccCCCcceEEEEecccCcccccCccEEEEEEEeCCCCCcEEEEEecCcccccccccc
Confidence 358999999875 99999999976543 77754 3444455667777788999999998652 35
Q ss_pred CcceecCCCCCCCCCcEEEEeeCCCCCCCc---eEEeEEeeeeeeeccCCCCCCcccEEEEcccCCCCCCCCceeCCCce
Q 013014 213 LRPIPIGVSADLLVGQKVYAIGNPFGLDHT---LTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGS 289 (451)
Q Consensus 213 ~~~l~l~~s~~~~~G~~V~~iG~p~g~~~~---~~~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPlvd~~G~ 289 (451)
+.++.|.....+..|+.++++|||.+.... ...|.+.... ..+++.++.++.|+|||||++.+|+
T Consensus 112 v~pi~L~~~~~~~~g~~v~v~Gwg~~~~~~~~~~~~g~i~~~~------------~~~i~~~~~~c~GdSGGPLv~~~g~ 179 (274)
T 2o8l_A 112 VKPATMSNNAETQTNQNITVTGYPGDKPVATMWESKGKITYLK------------GEAMQYDLSTTGGNSGSPVFNEKNE 179 (274)
T ss_dssp SCCCEECCCTTCCTTCEEEEEECCTTSSTTCEEEEEEEEEEEE------------TTEEEESCCCCTTCTTCEEECTTSC
T ss_pred cccccccccccccCCCEEEEEECCCCCCCceEEecCceEEecC------------CCeEEeCcccCCCCchhheeccCCe
Confidence 788889765567899999999999765422 2445544321 2467889999999999999998999
Q ss_pred EEEEEeeeeCCCCCccceeEEEeccCchhhHHHhhh
Q 013014 290 LIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (451)
Q Consensus 290 VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (451)
||||++++... . .+.++++. ..+..|+++.++
T Consensus 180 lvGIvS~G~~~-~--~~~~~~~~-~~~~~wI~~~i~ 211 (274)
T 2o8l_A 180 VIGIHWGGVPN-E--FNGAVFIN-ENVRNFLKQNIE 211 (274)
T ss_dssp EEEEEEEEETT-T--EEEEEECC-HHHHHHHHHHCT
T ss_pred EEEEEeCcccC-C--CCceEEec-HHHHHHHHHHHh
Confidence 99999987542 2 23455553 455666766543
No 23
>2vid_A Serine protease SPLB; hydrolase; 1.80A {Staphylococcus aureus}
Probab=99.78 E-value=1.3e-18 Score=160.98 Aligned_cols=157 Identities=23% Similarity=0.419 Sum_probs=109.8
Q ss_pred eEEEEEEEcCCCeEEecccccCCCC---cEEEEe----CCCcEEE-EEEEEEcCCCCEEEEEEcCCC-----------CC
Q 013014 152 GSGSGFVWDSKGHVVTNYHVIRGAS---DIRVTF----ADQSAYD-AKIVGFDQDKDVAVLRIDAPK-----------DK 212 (451)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHVv~~~~---~i~V~~----~dg~~~~-a~vv~~d~~~DlAlLkv~~~~-----------~~ 212 (451)
+.|+||+|+++ +|||||||+.+.. .+.+.. .++..+. .+++.+++.+||||||++.+. ..
T Consensus 22 ~~c~G~lI~~~-~VLTaaHcv~~~~~~~~v~v~~~~~~~~~~~~~~~~i~~~~~~~DiAll~l~~~~~~~~~~~~~~~~~ 100 (204)
T 2vid_A 22 KSATGFVVGKN-TILTNKHVSKNYKVGDRITAHPNSDKGNGGIYSIKKIINYPGKEDVSVIQVEERAIERGPKGFNFNDN 100 (204)
T ss_dssp SSCEEEEEETT-EEEECHHHHTTCCTTCEEEESCCSSSCCSCEEEEEEEEECSSSSCCEEEEECSEEEEEETTEEEHHHH
T ss_pred eeEEEEEEECC-EEEEChhHCCCccCCceEEEEeccccCCCcEEEeeEEecCCCCCeEEEEEEcCccccccccccccccc
Confidence 47999999876 9999999998755 455432 3556676 567777778999999998531 12
Q ss_pred CcceecCCCCCCCCCcEEEEeeCCCCCCC----ceEEeEEeeeeeeeccCCCCCCcccEEEEcccCCCCCCCCceeCCCc
Q 013014 213 LRPIPIGVSADLLVGQKVYAIGNPFGLDH----TLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSG 288 (451)
Q Consensus 213 ~~~l~l~~s~~~~~G~~V~~iG~p~g~~~----~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPlvd~~G 288 (451)
+.++.|.. .+..|+.++++|||.+... ....|.++... ...+..++.+++|+|||||++.+|
T Consensus 101 v~pi~l~~--~~~~g~~~~~~G~g~~~~~~~~~~~~~g~v~~~~------------~~~~~~~~~~~~GdSGGPl~~~~g 166 (204)
T 2vid_A 101 VTPFKYAA--GAKAGERIKVIGYPHPYKNKYVLYESTGPVMSVE------------GSSIVYSAHTESGNSGSPVLNSNN 166 (204)
T ss_dssp CCCCCBCS--CCCTTCEEEEEECCCCCC--CCCEEEEEEEEEEE------------TTEEEECCCCCGGGTTCEEECTTS
T ss_pred ccccccCC--cCCCCCEEEEEeCCCCCCCCcceEeeccEEeecc------------CCeEEEecccCCCCccCcEECCCC
Confidence 46777753 5788999999999976543 23445554421 246788899999999999999999
Q ss_pred eEEEEEeeeeCCCCCccceeEEE-eccCchhhHHHhh
Q 013014 289 SLIGINTAIYSPSGASSGVGFSI-PVDTVNGIVDQLV 324 (451)
Q Consensus 289 ~VVGI~s~~~~~~~~~~~~~~aI-P~~~i~~~l~~l~ 324 (451)
+||||+++....++ ....+|++ +...+++|+++.+
T Consensus 167 ~lvGI~s~g~~~~~-~~~~~~~~~~~~~~~~wI~~~~ 202 (204)
T 2vid_A 167 ELVGIHFASDVKND-DNRNAYGVYFTPEIKKFIAENI 202 (204)
T ss_dssp CEEEEEEEECC----CCCCEEEECCCHHHHHHHHHHS
T ss_pred eEEEEEecCccCCC-cccccceeEeCHHHHHHHHhhc
Confidence 99999998753111 22345544 3355666666543
No 24
>1wcz_A Glutamyl endopeptidase; virulence factor, hydrolase; 2.00A {Staphylococcus aureus} SCOP: b.47.1.1
Probab=99.78 E-value=4.8e-18 Score=164.76 Aligned_cols=158 Identities=20% Similarity=0.309 Sum_probs=115.0
Q ss_pred CeEEEEEEEcCCCeEEecccccCCCC----cEEEEe--------CCCcEEEEEEEEEcCCCCEEEEEEcCCC------CC
Q 013014 151 QGSGSGFVWDSKGHVVTNYHVIRGAS----DIRVTF--------ADQSAYDAKIVGFDQDKDVAVLRIDAPK------DK 212 (451)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHVv~~~~----~i~V~~--------~dg~~~~a~vv~~d~~~DlAlLkv~~~~------~~ 212 (451)
...|+||+|+++ ||||||||+.+.. .+.|++ .+++...++++..+..+||||||++.+. ..
T Consensus 33 ~~~CgG~lI~~~-~VLTAAHCv~~~~~~~~~i~V~~G~~~~~~~~~g~~~~~~i~~~~~~~DIALLkL~~~~~~~~~~~~ 111 (268)
T 1wcz_A 33 TFIASGVVVGKD-TLLTNKHVVDATHGDPHALKAFPSAINQDNYPNGGFTAEQITKYSGEGDLAIVKFSPNEQNKHIGEV 111 (268)
T ss_dssp EEEEEEEECSSS-EEEECHHHHGGGTTCGGGEEEEETCCBTTBCTTCCEEEEEEEECSSSSCCEEEEECCCTTSCCHHHH
T ss_pred CEEEEEEEEECC-EEEEChhhCCCccCCcceEEEEecccCcccccCCcEEEEEEecCCCCCcEEEEEecCcccccccccc
Confidence 468999999875 9999999997644 377764 3444455667777778999999998653 13
Q ss_pred CcceecCCCCCCCCCcEEEEeeCCCCCCC---ceEEeEEeeeeeeeccCCCCCCcccEEEEcccCCCCCCCCceeCCCce
Q 013014 213 LRPIPIGVSADLLVGQKVYAIGNPFGLDH---TLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGS 289 (451)
Q Consensus 213 ~~~l~l~~s~~~~~G~~V~~iG~p~g~~~---~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPlvd~~G~ 289 (451)
+.++.|.....+..|+.++++|||.+... ....+.++... ..+++.++.++.|+|||||++.+|+
T Consensus 112 v~pi~L~~~~~~~~g~~v~v~Gwg~~~~~~~~~~~~g~i~~~~------------~~~i~~~~~~c~GdSGGPLv~~~g~ 179 (268)
T 1wcz_A 112 VKPATMSNNAETQVNQNITVTGYPGDKPVATMWESKGKITYLK------------GEAMQYDLSTTGGNSGSPVFNEKNE 179 (268)
T ss_dssp SCCCCBCCCSSCCTTCEEEEEECCTTSSTTCEEEEEEEEEEEE------------TTEEEESBCCCTTCTTCEEECTTSC
T ss_pred cceeecccccccCCCCEEEEEECCCCCCCceEEeecceEEeeC------------CCeEEEecccCCCCccCeEEccCCE
Confidence 67888876556788999999999976432 23445554321 2467889999999999999998999
Q ss_pred EEEEEeeeeCCCCCccceeEEEeccCchhhHHHhhh
Q 013014 290 LIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (451)
Q Consensus 290 VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (451)
||||++++... . .+.++++. ..+..|+++.++
T Consensus 180 lvGIvS~G~~~-~--~~~~~~~~-~~~~~wI~~~i~ 211 (268)
T 1wcz_A 180 VIGIHWGGVPN-E--FNGAVFIN-ENVRNFLKQNIE 211 (268)
T ss_dssp EEEEEEEEETT-T--EEEEEECC-HHHHHHHHHHCT
T ss_pred EEEEEeCCccC-C--cceeEEcC-HHHHHHHHHHHH
Confidence 99999987542 2 23556653 556677766554
No 25
>1qtf_A Exfoliative toxin B; serine protease, superantigen, hydrolase; 2.40A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dt2_A
Probab=99.78 E-value=3.9e-19 Score=170.15 Aligned_cols=144 Identities=24% Similarity=0.363 Sum_probs=105.9
Q ss_pred CeEEEEEEEcCCCeEEecccccCCCC----cEEEEeCC------------CcEEEEEEEEEcC---CCCEEEEEEcCCCC
Q 013014 151 QGSGSGFVWDSKGHVVTNYHVIRGAS----DIRVTFAD------------QSAYDAKIVGFDQ---DKDVAVLRIDAPKD 211 (451)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHVv~~~~----~i~V~~~d------------g~~~~a~vv~~d~---~~DlAlLkv~~~~~ 211 (451)
...|+||+|++ ++|||||||+.+.. .+.+.... ...+.++.+..|+ .+|||||+++.+..
T Consensus 47 ~~~c~G~lI~~-~~VLTAaHcv~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~i~~hp~~~~~DiALLkl~~~~~ 125 (246)
T 1qtf_A 47 STLATGVLIGK-NTIVTNYHVAREAAKNPSNIIFTPAQNRDAEKNEFPTPYGKFEAEEIKESPYGQGLDLAIIKLKPNEK 125 (246)
T ss_dssp TEEEEEEEEET-TEEEECHHHHGGGTTCGGGEEEEETCCCCTTTTCCCCTTCCEEEEEEESCTTCTTSCCEEEEECCCTT
T ss_pred CceEEEEEEEC-CEEEECHHhCCCCCCCceEEEEecCccccccccccccCCceEEEEEEEeCCCCCCCCEEEEEEeCCcc
Confidence 46899999987 59999999998654 36665432 1468889999898 89999999987531
Q ss_pred ------CCcceecCCCCCCCCCcEEEEeeCCCCCCCce-EEeEEeeeeeeeccCCCCCCcccEEEEcccCCCCCCCCcee
Q 013014 212 ------KLRPIPIGVSADLLVGQKVYAIGNPFGLDHTL-TTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLL 284 (451)
Q Consensus 212 ------~~~~l~l~~s~~~~~G~~V~~iG~p~g~~~~~-~~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPlv 284 (451)
.++++.|.++..+..|+.++++|||.+..... ....+. .. ..+++++.+++|+|||||+
T Consensus 126 ~~~~~~~v~~i~L~~~~~~~~g~~v~v~G~p~g~~~~~~~~~~~~-----~~---------~~~~~~~~~~~GdSGGPlv 191 (246)
T 1qtf_A 126 GESAGDLIQPANIPDHIDIAKGDKYSLLGYPYNYSAYSLYQSQIE-----MF---------NDSQYFGYTEVGNSGSGIF 191 (246)
T ss_dssp SCCHHHHSCCCCCCSSCCCCTTCEEEEEECCTTTSTTCCEEEEEE-----ES---------SSSBEESCCCGGGTTCEEE
T ss_pred ccccccceeeeecCCccccCCCCEEEEEECCCCCCCceeEeeeee-----ec---------CcEEEeCCCCCCCchhheE
Confidence 37888887666678999999999998765421 111111 00 0123467889999999999
Q ss_pred CCCceEEEEEeeeeCCCCCccceeEEEeccCch
Q 013014 285 DSSGSLIGINTAIYSPSGASSGVGFSIPVDTVN 317 (451)
Q Consensus 285 d~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~ 317 (451)
|.+|+||||+++... ++++|+..+.
T Consensus 192 ~~~g~lvGI~s~g~~--------~~~ipi~~~~ 216 (246)
T 1qtf_A 192 NLKGELIGIHSGKGG--------QHNLPIGVFF 216 (246)
T ss_dssp CTTCCEEEEEEEEET--------TTTEEEEEET
T ss_pred CCCCEEEEEEecccc--------Cccccchhhh
Confidence 999999999998642 4677765543
No 26
>1hpg_A Glutamic acid specific protease; serine protease, hydrolase-hydrolase inhibitor complex; 1.50A {Streptomyces griseus} SCOP: b.47.1.1
Probab=99.77 E-value=5.3e-18 Score=155.77 Aligned_cols=159 Identities=18% Similarity=0.274 Sum_probs=117.3
Q ss_pred eEE-EEEEEcCC--CeEEecccccCCCCcEEEEeCCCcEEEEEEEEEc-CCCCEEEEEEcCCCCCCccee--------cC
Q 013014 152 GSG-SGFVWDSK--GHVVTNYHVIRGASDIRVTFADQSAYDAKIVGFD-QDKDVAVLRIDAPKDKLRPIP--------IG 219 (451)
Q Consensus 152 ~~G-SGfiI~~~--G~ILT~aHVv~~~~~i~V~~~dg~~~~a~vv~~d-~~~DlAlLkv~~~~~~~~~l~--------l~ 219 (451)
..| +||+++++ +|||||+||+++...+. ..++....+++...+ +..|+||||++.+....+.+. +.
T Consensus 12 ~~CT~Gfiv~~~g~~~ilT~~Hv~~~~~~v~--~~~~~~~~g~~~~~~~~~~DiAlikl~~~~~~~~~v~~~~g~~~~i~ 89 (187)
T 1hpg_A 12 SRCSAAFNVTKGGARYFVTAGHCTNISANWS--ASSGGSVVGVREGTSFPTNDYGIVRYTDGSSPAGTVDLYNGSTQDIS 89 (187)
T ss_dssp EEEECCEEEEETTEEEEEECHHHHTTCSEEE--SSTTCCEEEEEEEEECSBSCEEEEEECSSCCCCSEEECSSSCEEECC
T ss_pred CcCcceEEEEECCeeEEEECcccCCCCCeEE--eCCCceeEEEEeCccCCCCCEEEEEeCCCCCcCceEEecCCceeeec
Confidence 345 59999875 48999999999887654 456654446666555 788999999986422223333 33
Q ss_pred CCCCCCCCcEEEEeeCCCCCCCceEEeEEeeeeeeeccCCCCCCcccEEEEcccCCCCCCCCceeCCCceEEEEEeeeeC
Q 013014 220 VSADLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGSLIGINTAIYS 299 (451)
Q Consensus 220 ~s~~~~~G~~V~~iG~p~g~~~~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPlvd~~G~VVGI~s~~~~ 299 (451)
.+..+++|+.|+++|+|.+ .+.|+|+++.+.... . .....+++++++.+++|+|||||++. +++|||+++...
T Consensus 90 ~~~~~~~G~~v~~~G~~~g----~t~G~v~~~~~~v~~-~-~~~~~~~i~t~~~~~~GdSGgpl~~~-~~~vGi~s~~~~ 162 (187)
T 1hpg_A 90 SAANAVVGQAIKKSGSTTK----VTSGTVTAVNVTVNY-G-DGPVYNMVRTTACSAGGDSGGAHFAG-SVALGIHSGSSG 162 (187)
T ss_dssp EECCCCTTCEEEEEETTTE----EEEEEEEEEEEEEEE-T-TEEEEEEEEECCCCCTTCTTCEEEET-TEEEEEEEEESC
T ss_pred cccCCCCCCEEEEEEcCCC----EeEEEEEEeEEEEEe-C-CCeEeeeEEeccccCCCCCCCeEEEC-CEEEEEEEeeCC
Confidence 4567899999999999865 688999988876532 1 11245789999999999999999986 499999998753
Q ss_pred CCCCccceeEEEeccCchhhH
Q 013014 300 PSGASSGVGFSIPVDTVNGIV 320 (451)
Q Consensus 300 ~~~~~~~~~~aIP~~~i~~~l 320 (451)
.+. ..+.+|++|++.+++.+
T Consensus 163 ~~~-~~~~~~~~~i~~~~~~l 182 (187)
T 1hpg_A 163 CSG-TAGSAIHQPVTEALSAY 182 (187)
T ss_dssp CBT-TBCCCEEEEHHHHHHHH
T ss_pred CCC-CCCceEEEEHHHHHHHc
Confidence 332 34689999997766544
No 27
>2oua_A Serine protease, protein NAPA; kinetic stability, acid stability, electros hydrolase; HET: 2AB; 1.85A {Nocardiopsis alba}
Probab=99.76 E-value=7.5e-18 Score=154.84 Aligned_cols=155 Identities=17% Similarity=0.239 Sum_probs=117.4
Q ss_pred eEEEEEEEc-CCC--eEEecccccCCCCcEEEEeCCCcEEEEEEEEEc-CCCCEEEEEEcCCCCCCcc---------eec
Q 013014 152 GSGSGFVWD-SKG--HVVTNYHVIRGASDIRVTFADQSAYDAKIVGFD-QDKDVAVLRIDAPKDKLRP---------IPI 218 (451)
Q Consensus 152 ~~GSGfiI~-~~G--~ILT~aHVv~~~~~i~V~~~dg~~~~a~vv~~d-~~~DlAlLkv~~~~~~~~~---------l~l 218 (451)
...+||++. ++| |||||+||+++...+ ...| +.+++++.| +..|+||||++.+....+. +++
T Consensus 14 ~CTsGf~v~~~~G~~~ilTa~Hc~~~g~~v--~~~d---~~g~v~~~~~p~~DiAlikl~~~~~~~~~v~~~g~~~~~~l 88 (188)
T 2oua_A 14 RCSVGFAATNASGQPGFVTAGHCGSVGTQV--SIGN---GRGVFERSVFPGNDAAFVRGTSNFTLTNLVSRYNSGGYATV 88 (188)
T ss_dssp EEECCEEEECTTCCEEEEECGGGCCTTCEE--EETT---EEEEEEEEECSBSCEEEEEEEESCEEEEEEECGGGCSEEEC
T ss_pred cEecCEEEEeCCCCEEEEECcccCCCCCEE--EecC---ceEEEEeeCCCCCCEEEEEeCCCCccccceeecCCcceEec
Confidence 356899995 478 999999999766554 3455 889999999 9999999999864311221 346
Q ss_pred CCCCCCCCCcEEEEeeCCCCCCCceEEeEEeeeeeeeccCCCCCCcccEEEEcccCCCCCCCCceeCCCceEEEEEeeee
Q 013014 219 GVSADLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGSLIGINTAIY 298 (451)
Q Consensus 219 ~~s~~~~~G~~V~~iG~p~g~~~~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPlvd~~G~VVGI~s~~~ 298 (451)
..+..+++|+.|+.+|+|.+ .+.|+|+.+.+.... .. .....+++++..+.+|+|||||++ +|+++||+++..
T Consensus 89 ~~~~~~~vG~~v~~~G~~tG----~t~G~v~~~~~~v~~-~~-~~~~~~~~~~~~~~~GDSGgpl~~-~~~~vGi~s~~~ 161 (188)
T 2oua_A 89 SGSSTAPIGSQVCRSGSTTG----WYCGTIQARNQTVSY-PQ-GTVHSLTRTSVCAEPGDSGGSFIS-GTQAQGVTSGGS 161 (188)
T ss_dssp CBCCCCCTTCEEEEEETTTE----EEEEEEEEEEEEEEE-TT-EEEEEEEEESCCCCTTCTTCEEEE-TTEEEEEEEEEE
T ss_pred cCccCCCCCCeEEEEEcCCC----eEEEEEEEEeeEEEe-CC-CcEeeeEeeeeecCCCCccceEEE-CCEEEEEEeccC
Confidence 66677899999999999976 578999988876532 11 123467888888899999999994 889999999875
Q ss_pred CCCCCccceeEEEeccCchhh
Q 013014 299 SPSGASSGVGFSIPVDTVNGI 319 (451)
Q Consensus 299 ~~~~~~~~~~~aIP~~~i~~~ 319 (451)
..+. ..+++|++|++.+.+.
T Consensus 162 ~~~~-~~~~~~~~pi~~~l~~ 181 (188)
T 2oua_A 162 GNCR-TGGTTFYQEVNPMLNS 181 (188)
T ss_dssp EETT-TEEEEEEEESHHHHHH
T ss_pred CCCC-CCCceEEEEHHHHHHH
Confidence 3332 3468999998666553
No 28
>2qa9_E Streptogrisin-B; chymotrypsin-type serine peptidase, second tetrahedral inter tetrapeptide, beta barrels, alpha helix, hydrolase; HET: GOL; 1.18A {Streptomyces griseus} SCOP: b.47.1.1 PDB: 1sge_E 1sgn_E 1sgy_E 1sgd_E 2nu0_E 2nu1_E 2gkv_E 2nu3_E 2nu4_E 2nu2_E* 2qaa_A* 2sgd_E 2sge_E 2sgf_E 2sgp_E 2sgq_E 3sgq_E 1sgp_E 1cso_E 1ct0_E ...
Probab=99.76 E-value=6e-18 Score=154.83 Aligned_cols=163 Identities=24% Similarity=0.344 Sum_probs=117.6
Q ss_pred CeEEE-EEEEcC--CCeEEecccccCCCCcEEEEeCCCcEEEEEEEEEc-CCCCEEEEEEcC-CC---CCCcceecCCCC
Q 013014 151 QGSGS-GFVWDS--KGHVVTNYHVIRGASDIRVTFADQSAYDAKIVGFD-QDKDVAVLRIDA-PK---DKLRPIPIGVSA 222 (451)
Q Consensus 151 ~~~GS-GfiI~~--~G~ILT~aHVv~~~~~i~V~~~dg~~~~a~vv~~d-~~~DlAlLkv~~-~~---~~~~~l~l~~s~ 222 (451)
.+.|| ||++.. ++|||||+||+.+...+.+...++..+ +++...+ +.+||||||++. +. ...+++.+....
T Consensus 11 ~~~ct~Gf~v~~~~~~~ilTaaHcv~~~~~~~v~~~~~~~~-g~~~~~~~~~~DiAll~l~~~~~~~~~~v~~~~l~~~~ 89 (185)
T 2qa9_E 11 TGRCSLGFNVRSGSTYYFLTAGHCTDGATTWWANSARTTVL-GTTSGSSFPNNDYGIVRYTNTTIPKDGTVGGQDITSAA 89 (185)
T ss_dssp SCEEECCEEEEETTEEEEEECHHHHTTCSEEESSTTSCSEE-EEEEEEECSBSCEEEEEECCSSSCCCCEETTEECCEEC
T ss_pred CCcEeccEEEEECCceEEEECcccCCCCCcEEecCCCceEe-EEEeccccCCCCEEEEEecCCCccccCccceeeeCCcc
Confidence 34676 999964 369999999999988887765554443 5556666 889999999986 32 123566775445
Q ss_pred CCCCCcEEEEeeCCCCCCCceEEeEEeeeeeeeccCCCCCCcccEEEEcccCCCCCCCCceeCCCceEEEEEeeeeCCCC
Q 013014 223 DLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGSLIGINTAIYSPSG 302 (451)
Q Consensus 223 ~~~~G~~V~~iG~p~g~~~~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~~ 302 (451)
.+..|+.++++||+.+ .+.+.+..+..... +.....+...++.+...++|+|||||++.+ +++||+++....+.
T Consensus 90 ~~~~g~~v~~~Gw~~~----~~~g~l~~~~~~v~-~~~~~~~~~~~~~~~cac~GDSGGPlv~~~-~~vGI~s~g~~~~~ 163 (185)
T 2qa9_E 90 NATVGMAVTRRGSTTG----THSGSVTALNATVN-YGGGDVVYGMIRTNVCAEPGDSGGPLYSGT-RAIGLTSGGSGNCS 163 (185)
T ss_dssp CCCTTCEEEEEETTTE----EEEEEEEEEEEEEE-CSTTCEEEEEEEESCCCCTTCTTCEEEETT-EEEEEEEEEEEETT
T ss_pred cCCCCCEEEEecCCCc----eeEeEEEEEEEEEE-cCCCCEEeceEEecccCCCCCccceEEECC-EEEEEEEecCCCCC
Confidence 6789999999999753 45777776665532 111111234567778889999999999865 99999998754322
Q ss_pred CccceeEEEeccCchhhHH
Q 013014 303 ASSGVGFSIPVDTVNGIVD 321 (451)
Q Consensus 303 ~~~~~~~aIP~~~i~~~l~ 321 (451)
....++++|+..++++++
T Consensus 164 -~~~p~vyt~v~~~~~wI~ 181 (185)
T 2qa9_E 164 -SGGTTFFQPVTEALSAYG 181 (185)
T ss_dssp -TEEEEEEEEHHHHHHHHT
T ss_pred -CCCcEEEEEHHHHHHhhC
Confidence 346789999988888775
No 29
>2ea3_A Chymotrypsin; celloulomonas, protease, hydrolase; 1.78A {Cellulomonas bogoriensis}
Probab=99.71 E-value=9.2e-17 Score=147.63 Aligned_cols=151 Identities=22% Similarity=0.339 Sum_probs=112.8
Q ss_pred EEEEEEEcCCCeEEecccccCCCCcEEEEeCCCcEEEEEEEEEc-CCCCEEEEEEcCCCCCCc--------ceecCCCCC
Q 013014 153 SGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDAKIVGFD-QDKDVAVLRIDAPKDKLR--------PIPIGVSAD 223 (451)
Q Consensus 153 ~GSGfiI~~~G~ILT~aHVv~~~~~i~V~~~dg~~~~a~vv~~d-~~~DlAlLkv~~~~~~~~--------~l~l~~s~~ 223 (451)
.-+||+++. +||||+||+++...+. ..| ++++..| +..|+||||++.+....+ ++++..+..
T Consensus 17 CT~Gf~~~~--~ilTa~Hc~~~~~~v~--~~d-----g~v~~~~~~~~DiAlikl~~~~~~~~~v~~~~g~~v~l~~s~~ 87 (189)
T 2ea3_A 17 CSIGFAVNG--GFITAGHCGRTGATTA--NPT-----GTFAGSSFPGNDYAFVRTGAGVNLLAQVNNYSGGRVQVAGHTA 87 (189)
T ss_dssp EECCEEETT--EEEECGGGCCTTCEEE--TTT-----EEEEEEECSBSCEEEEEECTTCEEEEEEECSSSCEEECCBCCC
T ss_pred CccCEEccC--eEEEchhcCCCCCEEE--eCC-----cEEEeeCCCCCCEEEEEECCCCccccceEecCCceeecCCCcC
Confidence 347999964 9999999999877654 444 7788888 899999999986431112 335666677
Q ss_pred CCCCcEEEEeeCCCCCCCceEEeEEeeeeeeeccCCCCCCcccEEEEcccCCCCCCCCceeCCCceEEEEEeeeeCCCCC
Q 013014 224 LLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGSLIGINTAIYSPSGA 303 (451)
Q Consensus 224 ~~~G~~V~~iG~p~g~~~~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~~~ 303 (451)
+++|+.|+.+|++.+ .+.|+|+.+.+.... .. .....+++++..+.+|+|||||++ +|+++||+++....++
T Consensus 88 ~~vG~~v~~~G~~tG----~t~G~Vs~~~~~v~~-~~-~~~~~~~~~~~~~~~GDSGgpl~~-~~~~vGi~s~~~~~c~- 159 (189)
T 2ea3_A 88 APVGSAVCRSGSTTG----WHCGTITALNSSVTY-PE-GTVRGLIRTTVCAEPGDSGGSLLA-GNQAQGVTSGGSGNCR- 159 (189)
T ss_dssp CCTTCEEEEEETTTE----EEEEEEEEEEEEEEE-TT-EEEEEEEEESCCCCTTCTTCEEEE-TTEEEEEEEEEEEETT-
T ss_pred CCCCCEEEEEEeCCc----cEEEEEEecceEEEe-CC-ccCcceEEeeeeccCCCccCeEEE-CCEEEEEEeecCCCCC-
Confidence 899999999999866 578999888776531 11 113457888888999999999996 7899999998754332
Q ss_pred ccceeEEEeccCchhhH
Q 013014 304 SSGVGFSIPVDTVNGIV 320 (451)
Q Consensus 304 ~~~~~~aIP~~~i~~~l 320 (451)
..+.+|++|++.+++.+
T Consensus 160 ~~~~~~~~pi~~~l~~~ 176 (189)
T 2ea3_A 160 TGGTTFFQPVNPILQAY 176 (189)
T ss_dssp TEEEEEEEEHHHHHHHH
T ss_pred CCCcEEEEEHHHHHHHC
Confidence 34689999986665543
No 30
>2pfe_A Protease A, alkaline serine protease, TFPA; beta-barrels, thermophIle, kinetic stabilit thermostability, protein folding; HET: 2AB; 1.44A {Thermobifida fusca}
Probab=99.70 E-value=5.2e-17 Score=148.86 Aligned_cols=153 Identities=19% Similarity=0.279 Sum_probs=113.6
Q ss_pred eEE-EEEEEcC--CCeEEecccccCCCCcEEEEeCCCcEEEEEEEEEc-CCCCEEEEEEcCCCCCCc--------ceecC
Q 013014 152 GSG-SGFVWDS--KGHVVTNYHVIRGASDIRVTFADQSAYDAKIVGFD-QDKDVAVLRIDAPKDKLR--------PIPIG 219 (451)
Q Consensus 152 ~~G-SGfiI~~--~G~ILT~aHVv~~~~~i~V~~~dg~~~~a~vv~~d-~~~DlAlLkv~~~~~~~~--------~l~l~ 219 (451)
..| +||++.+ ++|||||+||+++...+.+ +.++++..| +..|+|+||++.+....+ ++++.
T Consensus 14 ~~CT~Gf~v~~~~~~~ilTa~Hc~~~g~~v~~-------~~g~v~~~~~~~~D~Alikl~~~~~~~~~v~~~~g~~~~i~ 86 (186)
T 2pfe_A 14 YRCSIGFSVRQGSQTGFATAGHCGSTGTRVSS-------PSGTVAGSYFPGRDMGWVRITSADTVTPLVNRYNGGTVTVT 86 (186)
T ss_dssp EEEECCEEEEETTEEEEEECGGGCCTTCEEBT-------TTEEEEEEECSBSCEEEEEECTTSEEEEEEECSSSCEEECC
T ss_pred CcEEeeEEEEcCCeeEEEEChhhCCCCCEEEE-------eeEEEEecCCCCCCEEEEEeCCCcccccceeccCCceEecC
Confidence 345 6999964 4689999999998877664 557888887 899999999986421122 23455
Q ss_pred CCCCCCCCcEEEEeeCCCCCCCceEEeEEeeeeeeeccCCCCCCcccEEEEcccCCCCCCCCceeCCCceEEEEEeeeeC
Q 013014 220 VSADLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGSLIGINTAIYS 299 (451)
Q Consensus 220 ~s~~~~~G~~V~~iG~p~g~~~~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPlvd~~G~VVGI~s~~~~ 299 (451)
.+..+++|++|+.+|++.+ .+.|+|+++.+..... . ..+..+++++..+.+|+|||||++ +++++||+++...
T Consensus 87 ~~~~~~vG~~vc~~G~~tG----~t~G~vs~~~~tv~~~-~-~~~~~~~~~~~c~~~GDSGgpl~~-~~~~vGi~s~g~~ 159 (186)
T 2pfe_A 87 GSQEAATGSSVCRSGATTG----WRCGTIQSKNQTVRYA-E-GTVTGLTRTTACAEGGDSGGPWLT-GSQAQGVTSGGTG 159 (186)
T ss_dssp BCCCCCTTCEEEEEETTTE----EEEEEEEEEEEEEEET-T-EEEEEEEEESCCCCTTCTTCEEEE-TTEEEEEEEEEEE
T ss_pred CCCCCCCCCeEEEEEeCCc----eEEEEEEEEeeeEEeC-C-ceEeceEeccEEecCCCccCeEEE-CCEEEEEEeecCC
Confidence 5667899999999999876 6789999888764321 1 123456788888889999999995 7899999998753
Q ss_pred CCCCccceeEEEeccCchhh
Q 013014 300 PSGASSGVGFSIPVDTVNGI 319 (451)
Q Consensus 300 ~~~~~~~~~~aIP~~~i~~~ 319 (451)
.+. ..+.+|++|++.+.+.
T Consensus 160 ~c~-~~~~~~~~pi~~~l~~ 178 (186)
T 2pfe_A 160 DCR-SGGITFFQPINPLLSY 178 (186)
T ss_dssp ETT-TEEEEEEEEHHHHHHH
T ss_pred CCC-CCCcEEEEEHHHHHHH
Confidence 332 3468999997665543
No 31
>1mbm_A NSP4 proteinase, chymotrypsin-like serine protease; serine proteinase, chymotrypsin-like proteinase, collapsed O HOLE, transferase; 2.00A {Equine arteritis virus} SCOP: b.47.1.3
Probab=99.68 E-value=1.2e-16 Score=142.54 Aligned_cols=115 Identities=19% Similarity=0.332 Sum_probs=93.2
Q ss_pred cCeEEEEEEEcCCCeEEecccccCCCCcEEEEeCCCcEEEEEEEEEcCCCCEEEEEE---cCCCCCCcceecCCCCCCCC
Q 013014 150 PQGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDAKIVGFDQDKDVAVLRI---DAPKDKLRPIPIGVSADLLV 226 (451)
Q Consensus 150 ~~~~GSGfiI~~~G~ILT~aHVv~~~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv---~~~~~~~~~l~l~~s~~~~~ 226 (451)
+.+.||||+|+.+|++||++||+.+.....|++ +|+++. +.+++..|+|++++ +.+ ..+|+++++. +++
T Consensus 13 ~~G~GsgF~i~~~g~vVTA~HVv~~~~~~~V~~-~G~~~~---Vgf~~~~DlA~l~v~~~~~~-g~~P~l~las---p~v 84 (198)
T 1mbm_A 13 SYGTGSVWTRNNEVVVLTASHVVGRANMATLKI-GDAMLT---LTFKKNGDFAEAVTTQSELP-GNWPQLHFAQ---PTT 84 (198)
T ss_dssp SEEEEEEEEETTEEEEEEEHHHHCTTCEEEEEE-TTEEEE---EECEEETTEEEEEECTTTSC-SCCCBCCBCC---CCS
T ss_pred cCCccceEEECCCeEEEEeeeEEccCceEEEEE-CCEEEE---eecccCCcEEEEEeeccCCC-CCCcccccCC---Ccc
Confidence 468999999999999999999999999999999 998887 77779999999999 544 4678888853 688
Q ss_pred CcEEEEeeCCCCCCCceEEeEEeeeeeeeccCCCCCCcccEEEEcccCCCCCCCCceeCCCceEEEEEee
Q 013014 227 GQKVYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGSLIGINTA 296 (451)
Q Consensus 227 G~~V~~iG~p~g~~~~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPlvd~~G~VVGI~s~ 296 (451)
|+.-+. .+.|.+.++... ...++++ .||+||||++|.+ +||||+++
T Consensus 85 G~a~~~----------~~tG~~~~l~g~----------~g~l~~t---~PGDSGsPVl~~~-~vIGV~T~ 130 (198)
T 1mbm_A 85 GPASWC----------TATGDEEGLLSG----------EVCLAWT---TSGDSGSAVVQGD-AVVGVHTG 130 (198)
T ss_dssp EEEEEE----------ETTEEEEEEECS----------SCEECCC---CGGGTTCEEEETT-EEEEEEEE
T ss_pred cceEEe----------eccccEEEEecC----------CceeEcC---CCCCCCCccccCC-eEEEEEec
Confidence 883333 455666655411 3566666 7999999999998 99999998
No 32
>2sga_A Proteinase A; hydrolase (serine proteinase); 1.50A {Streptomyces griseus} SCOP: b.47.1.1 PDB: 1sgc_A 3sga_E* 4sga_E 5sga_E 2sfa_A
Probab=99.67 E-value=1.2e-16 Score=145.77 Aligned_cols=155 Identities=23% Similarity=0.352 Sum_probs=105.5
Q ss_pred CeEEE-EEEEcC--CCeEEecccccCCCCcEEEEeCCCcEEEEEEEEEcCCCCEEEEEEcCCCC---CCcce-----ecC
Q 013014 151 QGSGS-GFVWDS--KGHVVTNYHVIRGASDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDAPKD---KLRPI-----PIG 219 (451)
Q Consensus 151 ~~~GS-GfiI~~--~G~ILT~aHVv~~~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~~~~---~~~~l-----~l~ 219 (451)
.+.|| ||+|+. ++|||||+||+.+...+.+-..++ ...+.+|+||||++.+.. ...++ .+.
T Consensus 11 ~~~ct~G~~v~~~~~~~vlTaaHc~~~~~~~~~G~~~~--------~~~~~~DiAlikl~~~~~~~~~v~~i~~~~~~~~ 82 (181)
T 2sga_A 11 GSRCSLGFNVSVNGVAHALTAGHCTNISASWSIGTRTG--------TSFPNNDYGIIRHSNPAAADGRVYLYNGSYQDIT 82 (181)
T ss_dssp TEEEECCEEEEETTEEEEEECHHHHTTCSEETTEEEEE--------EECSBSCEEEEEESCGGGCCCEEECSSSCEEECC
T ss_pred CCcEeccEEEEECCceEEEECcccCCCCCceeecceeC--------CcCCCCCEEEEEccCCCcccceEEecCCcceeec
Confidence 35677 999974 358999999998766543322211 233678999999986321 11221 222
Q ss_pred CCCCCCCCcEEEEeeCCCCCCCceEEeEEeeeeeeeccCCCCCCcccEEEEcccCCCCCCCCceeCCCceEEEEEeeeeC
Q 013014 220 VSADLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGSLIGINTAIYS 299 (451)
Q Consensus 220 ~s~~~~~G~~V~~iG~p~g~~~~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPlvd~~G~VVGI~s~~~~ 299 (451)
....+.+|+.|+++|++.+ .+.|.++.+..... +..+..+...++++..+++|+|||||++.+ +++||+++...
T Consensus 83 ~~~~~~~G~~v~~~G~~~~----~t~G~v~~~~~~v~-~~~~~~~~~~i~~~~c~~~GDSGGPlv~~~-~~vGI~s~g~~ 156 (181)
T 2sga_A 83 TAGNAFVGQAVQRSGSTTG----LRSGSVTGLNATVN-YGSSGIVYGMIQTNVCAQPGDSGGSLFAGS-TALGLTSGGSG 156 (181)
T ss_dssp EECCCCTTCEEEEEETTTE----EEEEEEEEEEEEEE-CGGGCEEEEEEEESCCCCTTCTTCEEEETT-EEEEEEEEEEE
T ss_pred ccccCCCCCEEEEeecCCC----ccEEEEEEeEEEEE-CCCCCEEeeeEecccccCCCCCCCEEEECC-EEEEEEEeeCC
Confidence 3456889999999998754 46778877766542 111111345677888888999999999866 99999998764
Q ss_pred CCCCccceeEEEeccCchhhH
Q 013014 300 PSGASSGVGFSIPVDTVNGIV 320 (451)
Q Consensus 300 ~~~~~~~~~~aIP~~~i~~~l 320 (451)
.+. ....++++|+..+++++
T Consensus 157 ~~~-~~~~~v~~~v~~~~~~l 176 (181)
T 2sga_A 157 NCR-TGGTTFYQPVTEALSAY 176 (181)
T ss_dssp ETT-TEEEEEEEEHHHHHHHH
T ss_pred CCc-CCCceEEEEHHHHHHhc
Confidence 333 24688999987776655
No 33
>3fan_A Non-structural protein; chymotrypsin-like, N-terminal beta-barrels, C-terminal alpha-beta extra domain; 1.90A {Porcine respiratory and reproductivesyndrome virus} PDB: 3fao_A
Probab=99.55 E-value=4.7e-15 Score=134.46 Aligned_cols=118 Identities=24% Similarity=0.301 Sum_probs=80.8
Q ss_pred cCeEEEEEEEcCCCeEEecccccCCCCcEEEEeCCCcEEEEEEEEEcCCCCEEEEEEcCCCCCCcceecCCCCCCCCCcE
Q 013014 150 PQGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDAPKDKLRPIPIGVSADLLVGQK 229 (451)
Q Consensus 150 ~~~~GSGfiI~~~G~ILT~aHVv~~~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~~~~~~~~l~l~~s~~~~~G~~ 229 (451)
..+.|+||.++.+++||||+|||.+.+. +...++..|. +.+|+..|+|++++......+|.++++... ..|..
T Consensus 28 ~~GsGt~F~i~g~~~VvTA~HVVg~~~~--vVt~~g~r~~---~~f~~~~D~All~i~~~~g~~P~lKlA~~~--~~G~a 100 (213)
T 3fan_A 28 SMGSGGVFTIDGKIKCVTAAHVLTGNSA--RVSGVGFNQM---LDFDVKGDFAIADCPNWQGVAPKAQFCEDG--WTGRA 100 (213)
T ss_dssp SEEEEEEEEETTEEEEEEEGGGSBTTEE--EEEETTEEEE---EECEEETTEEEEECTTCCSCCCBCCBCCTT--CCEEE
T ss_pred CCCceEEEEECCcEEEEEeccEeCCCCE--EEecCCcEEE---EEecCCCcEEEEEccCcCCCCCcceeeeee--ccCce
Confidence 3578999999877899999999999888 4445676664 367999999999996544578999987322 22333
Q ss_pred EEEeeCCCCCCCceEEeEEeeeeeeeccCCCCCCcccEEEEcccCCCCCCCCceeCCCceEEEEEeee
Q 013014 230 VYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGSLIGINTAI 297 (451)
Q Consensus 230 V~~iG~p~g~~~~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPlvd~~G~VVGI~s~~ 297 (451)
.+..-+ ....|.+.. ...+.+ .++|||||||+|.+|+||||+++.
T Consensus 101 ~~~~~~------gv~~G~i~~--------------~~al~~---T~pGdSGsPVvn~dG~VIGVHt~s 145 (213)
T 3fan_A 101 YWLTSS------GVEPGVIGN--------------GFAFCF---TACGDSGSPVITEAGELVGVHTGS 145 (213)
T ss_dssp EEEETT------EEEEEEEET--------------TEEEES---SCCCSTTCEEEETTSCEEEEEEC-
T ss_pred EEEEcc------Ccccccccc--------------CCEEEe---cCCCCCCCccCCCCCcEEEEEecc
Confidence 232211 122232220 012222 268999999999999999999975
No 34
>1pq7_A Trypsin; ultra-high resolution, catalysis, hydrolase; HET: ARG; 0.80A {Fusarium oxysporum} SCOP: b.47.1.2 PDB: 1fy4_A 1fy5_A 1gdn_A 1gdq_A 1gdu_A 1ppz_A* 1pq5_A* 1fn8_A* 1pq8_A* 1try_A 1xvm_A 1xvo_A* 2g51_A 2g52_A 2vu8_E 1pqa_A*
Probab=99.50 E-value=1.4e-12 Score=122.35 Aligned_cols=171 Identities=18% Similarity=0.230 Sum_probs=112.5
Q ss_pred CeEEEEEEEcCCCeEEecccccCCC--CcEEEEeC------CCcEEEEEEEEEcCC-----CCEEEEEEcCCCC---CCc
Q 013014 151 QGSGSGFVWDSKGHVVTNYHVIRGA--SDIRVTFA------DQSAYDAKIVGFDQD-----KDVAVLRIDAPKD---KLR 214 (451)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHVv~~~--~~i~V~~~------dg~~~~a~vv~~d~~-----~DlAlLkv~~~~~---~~~ 214 (451)
...|+|.+|+++ +|||+|||+.+. ..+.|++. +++.+..+-+..|+. +||||||++.+.. ...
T Consensus 23 ~~~CgGtLI~~~-~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~v~~i~~hp~y~~~~~DiALl~L~~~~~~~~~v~ 101 (224)
T 1pq7_A 23 GPWCGGSLLNAN-TVLTAAHCVSGYAQSGFQIRAGSLSRTSGGITSSLSSVRVHPSYSGNNNDLAILKLSTSIPSGGNIG 101 (224)
T ss_dssp EEEEEEEEEETT-EEEECHHHHTTSCGGGEEEEESCSBSSSSSEEECEEEEEECTTCBTTBTCCEEEEESSCCCCBTTBC
T ss_pred CeEEEEEEecCC-EEEEcHHccCCCCCCceEEEeCcceecCCCEEEEEEEEEECCCCCCCCCCEEEEEeCCCCcCCCccc
Confidence 357999999987 999999999853 46777763 345667777777775 4999999987642 356
Q ss_pred ceecCC-CCCCCCCcEEEEeeCCCCCC------CceEEeEEeeeeeeecc--CCCCCCcccEEEE-----cccCCCCCCC
Q 013014 215 PIPIGV-SADLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISS--AATGRPIQDVIQT-----DAAINPGNSG 280 (451)
Q Consensus 215 ~l~l~~-s~~~~~G~~V~~iG~p~g~~------~~~~~G~Vs~~~~~~~~--~~~~~~~~~~i~~-----d~~i~~G~SG 280 (451)
|+.|.. ......|+.++++||..... .......+.-+...... +........++.. ....+.|+||
T Consensus 102 picL~~~~~~~~~g~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSG 181 (224)
T 1pq7_A 102 YARLAASGSDPVAGSSATVAGWGATSEGGSSTPVNLLKVTVPIVSRATCRAQYGTSAITNQMFCAGVSSGGKDSCQGDSG 181 (224)
T ss_dssp CCCBCCTTCCCCTTCEEEEEESCCSSTTCSCCCSBCEEEEEEEECHHHHHHHHCTTTSCTTEEEECCTTCCCBCCTTCTT
T ss_pred ceecCCcccCCCCCCEEEEEecCCcCCCCCcccceeeEeEEEEEcHHHhhHhhcCCCCCCCeEEeecCCCCCCCCcCCCC
Confidence 777763 23467899999999874322 12333333322221111 1001112334443 2457899999
Q ss_pred CceeCCCceEEEEEeeeeCCCCCccceeEEEeccCchhhHHHh
Q 013014 281 GPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQL 323 (451)
Q Consensus 281 GPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l 323 (451)
|||+..+|.++||+++.. .++.....+....+...++|+++.
T Consensus 182 gPL~~~~g~l~Gi~S~g~-~C~~~~~p~vyt~V~~~~~WI~~~ 223 (224)
T 1pq7_A 182 GPIVDSSNTLIGAVSWGN-GCARPNYSGVYASVGALRSFIDTY 223 (224)
T ss_dssp CEEECTTCCEEEEEEECS-SSSCTTCCEEEEETTTSHHHHHHH
T ss_pred cceECcCCeEEEEEEeCC-CCCCCCCCeEEEEHHHHHHHHHhh
Confidence 999987899999999864 344333456778888888888753
No 35
>2xw9_A Complement factor D; immune system, hydrolase, serine protease, alternative pathw; HET: GOL; 1.20A {Homo sapiens} PDB: 2xwb_I* 1bio_A 1dfp_A* 1dic_A* 1dsu_A 1hfd_A 4d9r_A 1fdp_A 2xwa_A 1dst_A 4d9q_A
Probab=99.46 E-value=7.7e-12 Score=117.43 Aligned_cols=172 Identities=20% Similarity=0.288 Sum_probs=109.2
Q ss_pred CeEEEEEEEcCCCeEEecccccCCCC--cEEEEeCC---------CcEEEEEEEEEcCC-------CCEEEEEEcCCCC-
Q 013014 151 QGSGSGFVWDSKGHVVTNYHVIRGAS--DIRVTFAD---------QSAYDAKIVGFDQD-------KDVAVLRIDAPKD- 211 (451)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHVv~~~~--~i~V~~~d---------g~~~~a~vv~~d~~-------~DlAlLkv~~~~~- 211 (451)
...|+|.+|+++ +|||+|||+.+.. .+.|.+.. .+.+..+-+..|+. +||||||++.+..
T Consensus 23 ~~~CgGtLIs~~-~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIAll~L~~~~~~ 101 (228)
T 2xw9_A 23 AHLCGGVLVAEQ-WVLSAAHCLEDAADGKVQVLLGAHSLSQPEPSKRLYDVLRAVPHPDSQPDTIDHDLLLLQLSEKATL 101 (228)
T ss_dssp EEEEEEEEEETT-EEEECGGGGSSCTTCCEEEEESCSBSSSCCTTCEEEEEEEEEECTTCCTTCCTTCCEEEEESSCCCC
T ss_pred CeEEEEEEEeCC-EEEEcHHhCCCCCCCceEEEEcccccCCCCCcceEEEEEEEEeCCCCCCCCCCCcEEEEEeCCCccc
Confidence 357999999987 9999999997543 67777642 24456666666653 5999999987642
Q ss_pred --CCcceecCCC-CCCCCCcEEEEeeCCCCCC-----CceEEeEEeeeeeeeccCCC---CCCcccEEEE---cccCCCC
Q 013014 212 --KLRPIPIGVS-ADLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISSAAT---GRPIQDVIQT---DAAINPG 277 (451)
Q Consensus 212 --~~~~l~l~~s-~~~~~G~~V~~iG~p~g~~-----~~~~~G~Vs~~~~~~~~~~~---~~~~~~~i~~---d~~i~~G 277 (451)
...|+.|... ..+..|+.+.+.||..... .......+.-+......... ......++.. ....+.|
T Consensus 102 ~~~v~pi~l~~~~~~~~~g~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~C~G 181 (228)
T 2xw9_A 102 GPAVRPLPWQRVDRDVAPGTLCDVAGWGIVNHAGRRPDSLQHVLLPVLDRATCNRRTHHDGAITERLMCAESNRRDSCKG 181 (228)
T ss_dssp BTTBCCCCBCCSCCCCCTTC-CEEEESSCCSTTCCCCSBCEEEECCEECHHHHTSTTTTTTCCCTTEEEECCSSCBCCTT
T ss_pred CCCeeecccCCcccCCCCCCEEEEEEecccCCCCCCCchheEEEEEEcChhHhcCccccCCcccCCEEecCCCCCccCCC
Confidence 3566777543 3467899999999874322 12222222222221111110 1111233333 2457889
Q ss_pred CCCCceeCCCceEEEEEeeeeCCCCCccceeEEEeccCchhhHHHhh
Q 013014 278 NSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLV 324 (451)
Q Consensus 278 ~SGGPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~ 324 (451)
+|||||+. +|.++||+++....++.....+....+...++|+++.+
T Consensus 182 DsGgPL~~-~~~l~Gi~s~g~~~C~~~~~p~vyt~V~~~~~WI~~~i 227 (228)
T 2xw9_A 182 DAGGPLVC-GGVLEGVVTSGSRVCGNRKKPGIYTRVASYAAWIDSVL 227 (228)
T ss_dssp CTTCEEEE-TTEEEEEECCSCCCSSCTTSCEEEEEGGGGHHHHHHHH
T ss_pred CCcccEEE-CCEEEEEEeecCCcCCCCCCCcEEEEHHHHHHHHHHHh
Confidence 99999996 67999999976544443344567788888888887754
No 36
>2zch_P Prostate-specific antigen; human PSA, kallikrein related peptidases, antibodies, prostate cancer, glycoprotein, hydrolase, polymorphism; HET: NDG; 2.83A {Homo sapiens} PDB: 2zck_P* 2zcl_P* 3qum_P*
Probab=99.46 E-value=5.3e-12 Score=119.34 Aligned_cols=172 Identities=17% Similarity=0.232 Sum_probs=110.3
Q ss_pred CeEEEEEEEcCCCeEEecccccCCCCcEEEEeC-------CCcEEEEEEEEEcC------------------CCCEEEEE
Q 013014 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFA-------DQSAYDAKIVGFDQ------------------DKDVAVLR 205 (451)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHVv~~~~~i~V~~~-------dg~~~~a~vv~~d~------------------~~DlAlLk 205 (451)
...|+|.+|+++ +|||+|||+.+...+.+-.. .++.+..+-+..|+ .+|||||+
T Consensus 23 ~~~CgGsLIs~~-~VLTAAHC~~~~~~v~~G~~~~~~~~~~~~~~~v~~~~~Hp~y~~~~~~~~~~~~~~~~~~DIALl~ 101 (237)
T 2zch_P 23 RAVCGGVLVHPQ-WVLTAAHCIRNKSVILLGRHSLFHPEDTGQVFQVSHSFPHPLYDMSLLKNRFLRPGDDSSHDLMLLR 101 (237)
T ss_dssp SEEEEEEEEETT-EEEECGGGCCSSCEEEESCSBSSSCCTTCEEEEEEEEEECTTSCGGGGTSSSCCTTCBCTTCCEEEE
T ss_pred CeEEEEEEecCC-EEEEcHHhcCCCceEEEecccccCCCCCcEEEEEEEEecCCCcchhhhcccccccCCCCCcceEEEE
Confidence 457999999986 99999999987554433221 23456666566664 46999999
Q ss_pred EcCCC---CCCcceecCCCCCCCCCcEEEEeeCCCCCC------CceEEeEEeeeeeeeccCC-CCCCcccEEEE-----
Q 013014 206 IDAPK---DKLRPIPIGVSADLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISSAA-TGRPIQDVIQT----- 270 (451)
Q Consensus 206 v~~~~---~~~~~l~l~~s~~~~~G~~V~~iG~p~g~~------~~~~~G~Vs~~~~~~~~~~-~~~~~~~~i~~----- 270 (451)
++.+. ....|+.|... ....|+.+++.||..... .......+.-+........ .......++..
T Consensus 102 L~~~~~~~~~v~pi~Lp~~-~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~ 180 (237)
T 2zch_P 102 LSEPAELTDAVKVMDLPTQ-EPALGTTCYASGWGSIEPEEFLTPKKLQCVDLHVISNDVCAQVHPQKVTKFMLCAGRWTG 180 (237)
T ss_dssp ESSCCCCCSSCCCCCCCSS-CCCTTCEEEEEESCCSSSSSCCCCSBCEEEEEEEECHHHHHHHCSSBCCTTEEEEECTTC
T ss_pred eCCCCccCCcEeeeECCCC-CCCCCCEEEEEeCCccCCCCCcCCcccEEeEEEEeCHHHhcccccCCCCceEEeecCCCC
Confidence 98764 24567777543 467899999999875322 1222333322222111100 00111234433
Q ss_pred cccCCCCCCCCceeCCCceEEEEEeeeeCCCCCccceeEEEeccCchhhHHHhhh
Q 013014 271 DAAINPGNSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (451)
Q Consensus 271 d~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (451)
....+.|+|||||+. ++.++||+++....++.....+....+...++|+++.++
T Consensus 181 ~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~i~ 234 (237)
T 2zch_P 181 GKSTCSGDSGGPLVC-NGVLQGITSWGSEPCALPERPSLYTKVVHYRKWIKDTIV 234 (237)
T ss_dssp SCBCCTTCTTCEEES-SSSEEEEEEECCSSTTCTTCCEEEEEGGGGHHHHHHHHH
T ss_pred CCcccCCCccCeEEE-CCEEEEEEEeCcCCCCCCCCCcEEEEHHHHHHHHHHHHh
Confidence 235789999999996 679999999875444433445677888888898887664
No 37
>2pzd_A Serine protease HTRA2; PDZ domain, apoptosis, mitochondria, peptid module, hydrolase; 2.75A {Homo sapiens} SCOP: b.36.1.4
Probab=99.46 E-value=9.1e-14 Score=116.67 Aligned_cols=92 Identities=24% Similarity=0.366 Sum_probs=76.5
Q ss_pred cccccccccceecc--chhhhhhCc---------cceEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEcCC
Q 013014 327 GKVTRPILGIKFAP--DQSVEQLGV---------SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSN 395 (451)
Q Consensus 327 g~~~~~~lGi~~~~--~~~~~~~~~---------~Gv~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i~~ 395 (451)
|++.|+|||+.+.+ ...++.+++ .|++|.++.++|||+++||++ ||+|++|||++|.+
T Consensus 1 G~v~r~~lGi~~~~l~~~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGl~~-----------GD~I~~ing~~v~~ 69 (113)
T 2pzd_A 1 GSHMRRYIGVMMLTLSPSILAELQLREPSFPDVQHGVLIHKVILGSPAHRAGLRP-----------GDVILAIGEQMVQN 69 (113)
T ss_dssp ----CEECCEEEEECCHHHHHHHHHHCSSCCCCSSCEEEEEEBTTSHHHHHTCCT-----------TCEEEEETTEECCS
T ss_pred CcccccEeEEEEEeCCHHHHHHhccccccccCCCCCeEEEEeCCCChHHHcCCCC-----------CCEEEEECCEECCC
Confidence 56789999999886 234455543 799999999999999999999 99999999999999
Q ss_pred HHHHHHHHhcCCCCCEEEEEEEECCeEEEEEEEeeec
Q 013014 396 GSDLYRILDQCKVGDELLLQGIKQPPVLSDNLRLLWS 432 (451)
Q Consensus 396 ~~dl~~~l~~~~~g~~v~l~v~R~g~~~~~~v~l~~~ 432 (451)
+.++..++.. |+.+.++|.|+|+..++++++...
T Consensus 70 ~~~~~~~l~~---~~~v~l~v~R~g~~~~~~v~~~~~ 103 (113)
T 2pzd_A 70 AEDVYEAVRT---QSQLAVQIRRGRETLTLYVTPEVT 103 (113)
T ss_dssp HHHHHHHHHH---CSSEEEEEEETTEEEEEEECCEEC
T ss_pred HHHHHHHHhC---CCeEEEEEEECCEEEEEEEEEeec
Confidence 9999998875 688999999999999988887544
No 38
>1gvz_A Kallikrein-1E2; antigen, prostate specific antigen, hydrolase; 1.42A {Equus caballus} SCOP: b.47.1.2
Probab=99.46 E-value=3e-12 Score=121.03 Aligned_cols=169 Identities=18% Similarity=0.202 Sum_probs=106.3
Q ss_pred eEEEEEEEcCCCeEEecccccCCCCcEEEEeCC---------CcEEEEEEEEEcC------------------CCCEEEE
Q 013014 152 GSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD---------QSAYDAKIVGFDQ------------------DKDVAVL 204 (451)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHVv~~~~~i~V~~~d---------g~~~~a~vv~~d~------------------~~DlAlL 204 (451)
..|+|.+|+++ +|||+|||+. ..+.|.+.. ++.+..+-+..|+ .+|||||
T Consensus 24 ~~CgGsLIs~~-~VLTAAHC~~--~~~~v~~G~~~~~~~~~~~~~~~v~~~~~hp~y~~~~~~~~~~~~~~~~~~DIALl 100 (237)
T 1gvz_A 24 FQCGGVLVHPQ-WVLTAAHCMS--DDYQIWLGRHNLSKDEDTAQFHQVSDSFLDPQFDLSLLKKKYLRPYDDISHDLMLL 100 (237)
T ss_dssp EEEEEEEEETT-EEEECGGGCC--SSCEEEESCSBTTSCCTTCEEECEEEEEECTTSCGGGGGCSSCCTTSCCTTCCEEE
T ss_pred eEEEeEEeeCC-EEEEcHHhCC--CCCeEEEeecccccCCCCceEEEeeeEecCCccCcccccccccccccccCCceEEE
Confidence 47999999987 9999999997 344555422 3445566566664 6799999
Q ss_pred EEcCCC---CCCcceecCCCCCCCCCcEEEEeeCCCCCC-Cc-----eEEeEEeeeeeeeccCCCC-CCcccEEEEc---
Q 013014 205 RIDAPK---DKLRPIPIGVSADLLVGQKVYAIGNPFGLD-HT-----LTTGVISGLRREISSAATG-RPIQDVIQTD--- 271 (451)
Q Consensus 205 kv~~~~---~~~~~l~l~~s~~~~~G~~V~~iG~p~g~~-~~-----~~~G~Vs~~~~~~~~~~~~-~~~~~~i~~d--- 271 (451)
+++.+. ....|+.|... ....|+.+.++||..... .. .....+.-+.......... .....++...
T Consensus 101 ~L~~~~~~~~~v~picLp~~-~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~ 179 (237)
T 1gvz_A 101 RLAQPARITDAVKILDLPTQ-EPKLGSTCYTSGWGLISTFTNRGSGTLQCVELRLQSNEKCARAYPEKMTEFVLCATHRD 179 (237)
T ss_dssp EESSCCCCBTTBCCCCCCSS-CCCTTCEEEEEEEECSCTTTCSEEEEEEEEEEEEECGGGGCSSCGGGCCTTEEEEECSS
T ss_pred EeCCCcccCCcEeeeECCCC-CCCCCCEEEEECCCcccCCCCCCCCccEEEEEeEeChhHhhhhhhhcCCCceEEEeeCC
Confidence 998764 24567777544 467899999999875421 11 1222222222211111000 0112334332
Q ss_pred --ccCCCCCCCCceeCCCceEEEEEeeeeCCCCCccceeEEEeccCchhhHHHhhh
Q 013014 272 --AAINPGNSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (451)
Q Consensus 272 --~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (451)
...+.|+|||||+. +|.++||++++...++.....+....+....+|+++.++
T Consensus 180 ~~~~~C~GDSGgPL~~-~~~l~GI~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~~ 234 (237)
T 1gvz_A 180 DSGSICLGDSGGALIC-DGVFQGITSWGYSECADFNDNFVFTKVMPHKKWIKETIE 234 (237)
T ss_dssp TTCEECGGGTTCEEEE-TTEEEEEECCCSSSCEETTTSCCEEESGGGHHHHHHHHH
T ss_pred CCCccCCCCccCcEee-CCEEEEEEEeCCCCCCCCCCCcEEEEHHHHHHHHHHHHh
Confidence 24688999999996 789999999865334322334567778888888887654
No 39
>1a7s_A Heparin binding protein; serine protease homolog, endotoxin binding; HET: NAG; 1.12A {Homo sapiens} SCOP: b.47.1.2 PDB: 1ae5_A* 1fy3_A* 1fy1_A*
Probab=99.45 E-value=7.2e-12 Score=117.49 Aligned_cols=166 Identities=14% Similarity=0.203 Sum_probs=106.7
Q ss_pred CeEEEEEEEcCCCeEEecccccCCC--CcEEEEeCCC----------cEEEEEEEEEc------CCCCEEEEEEcCCCC-
Q 013014 151 QGSGSGFVWDSKGHVVTNYHVIRGA--SDIRVTFADQ----------SAYDAKIVGFD------QDKDVAVLRIDAPKD- 211 (451)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHVv~~~--~~i~V~~~dg----------~~~~a~vv~~d------~~~DlAlLkv~~~~~- 211 (451)
...|+|.+|+++ +|||+|||+.+. ..+.|.+... +.+..+-+..+ ..+|||||+++.+..
T Consensus 23 ~~~CgGtLI~~~-~VLTAAHC~~~~~~~~~~V~~G~~~~~~~~~~~~~~~~v~~i~~h~y~~~~~~~DIALl~L~~~~~~ 101 (225)
T 1a7s_A 23 RHFCGGALIHAR-FVMTAASCFQSQNPGVSTVVLGAYDLRRRERQSRQTFSISSMSENGYDPQQNLNDLMLLQLDREANL 101 (225)
T ss_dssp EEEEEEEEEETT-EEEECGGGC----CCSEEEEESCSSTTSCCTTTCEEEEEEEEECSSCBTTTTBSCCEEEEESSCCCC
T ss_pred CcEEEEEEeeCC-EEEEchhccCCCCCCceEEEEeeeECCCCCCcceeEEeEEEEecccccCCCCcCCEEEEEcCCcccC
Confidence 357999999987 999999999763 4577776421 34455444443 246999999987642
Q ss_pred --CCcceecCCCC-CCCCCcEEEEeeCCCCCC-----CceEEeEEeeeeeeeccCCCCCCcccEEEE-----cccCCCCC
Q 013014 212 --KLRPIPIGVSA-DLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISSAATGRPIQDVIQT-----DAAINPGN 278 (451)
Q Consensus 212 --~~~~l~l~~s~-~~~~G~~V~~iG~p~g~~-----~~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~-----d~~i~~G~ 278 (451)
...|+.|.... .+..|+.+.+.||..... .......+.-+.... +. ..++.. ....+.|+
T Consensus 102 ~~~v~pi~L~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~-----C~--~~~~Ca~~~~~~~~~C~GD 174 (225)
T 1a7s_A 102 TSSVTILPLPLQNATVEAGTRCQVAGWGSQRSGGRLSRFPRFVNVTVTPEDQ-----CR--PNNVCTGVLTRRGGICNGD 174 (225)
T ss_dssp BTTBCCCCCCCTTCCCCTTCEEEEEESCCSSTTCCCCSSCEEEEEEECCGGG-----SC--TTEEEEECSSSSCBCCTTC
T ss_pred CCceeEEEcCCCcCCCCCCCEEEEEeCCcCCCCCCcccccceeeeEECCHHH-----hc--cCceEEeccCCCCCcccCC
Confidence 35667775433 346899999999875432 122222222222111 11 133332 23678999
Q ss_pred CCCceeCCCceEEEEEeeeeCCCCCccceeEEEeccCchhhHHHhhhcc
Q 013014 279 SGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKFG 327 (451)
Q Consensus 279 SGGPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~~g 327 (451)
|||||+.. |.++||+++....++.. .+....+...++|+++.++..
T Consensus 175 SGgPl~~~-g~l~Gi~S~g~~~C~~~--p~vyt~V~~~~~WI~~~~~~~ 220 (225)
T 1a7s_A 175 GGTPLVCE-GLAHGVASFSLGPCGRG--PDFFTRVALFRDWIDGVLNNP 220 (225)
T ss_dssp TTCEEEET-TEEEEEEEEECSSTTSS--CEEEEEGGGGHHHHHHHHHSC
T ss_pred CcchheeC-CEEEEEEEEccCCcCCC--CcEEEEhHHhHHHHHHHhcCC
Confidence 99999964 79999999874444432 567788888999998877643
No 40
>2aiq_A Protein C activator; snake venom serine proteinase, hydrolas; HET: NAG NDG; 1.54A {Agkistrodon contortrix contortrix} PDB: 2aip_A*
Probab=99.45 E-value=4.3e-12 Score=119.62 Aligned_cols=172 Identities=19% Similarity=0.226 Sum_probs=108.0
Q ss_pred eEEEEEEEcCCCeEEecccccCCCCcEEEEeCC--------CcEEEEEEEEEcC-------CCCEEEEEEcCCC---CCC
Q 013014 152 GSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD--------QSAYDAKIVGFDQ-------DKDVAVLRIDAPK---DKL 213 (451)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHVv~~~~~i~V~~~d--------g~~~~a~vv~~d~-------~~DlAlLkv~~~~---~~~ 213 (451)
..|+|.+|+++ +|||+|||+.+...+.+-..+ .+.+..+-+..|+ .+||||||++.+. ...
T Consensus 23 ~~CgGsLIs~~-~VLTAAHC~~~~~~v~~G~~~~~~~~~~~~~~~~v~~~~~hp~y~~~~~~~DIALl~L~~~v~~~~~v 101 (231)
T 2aiq_A 23 SLCGGTLINQE-WVLTARHCDRGNMRIYLGMHNLKVLNKDALRRFPKEKYFCLNTRNDTIWDKDIMLIRLNRPVRNSAHI 101 (231)
T ss_dssp EEEEEEECSSS-EEEECGGGCCSSCEEEESCSCTTSCCTTCEEECEEEEECCSSCCSSSTTTTCCEEEEESSCCCCBTTB
T ss_pred CeEEEEEEeCC-EEEEcHHcCCCCCEEEEecccccccCCCceEEEEEEEEEECCCCCCCCCCCCEEEEEecCCCCCCCcE
Confidence 47999999976 999999999874433332221 1234444444444 3599999998764 235
Q ss_pred cceecCCCCCCCCCcEEEEeeCCCCCC------CceEEeEEeeeeeeeccCCCCCCcccEEEE-----cccCCCCCCCCc
Q 013014 214 RPIPIGVSADLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISSAATGRPIQDVIQT-----DAAINPGNSGGP 282 (451)
Q Consensus 214 ~~l~l~~s~~~~~G~~V~~iG~p~g~~------~~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~-----d~~i~~G~SGGP 282 (451)
.|+.|... ....|+.++++||..... .......+.-+...............++.. ....+.|+||||
T Consensus 102 ~picL~~~-~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgP 180 (231)
T 2aiq_A 102 APLSLPSN-PPSVGSVCRIMGWGTITSPNATLPDVPHCANINILDYAVCQAAYKGLAATTLCAGILEGGKDTCKGDSGGP 180 (231)
T ss_dssp CCCCCCSS-CCCTTCEEEEEESSCSSSSSCCCCSSCEEEEEEEECHHHHHHHCTTCCSSEEEEECTTCSCBCCTTCTTCE
T ss_pred EeeECCCC-CCCCCCEEEEEeCCccCCCCCccCchhhhccceecchhhhhhhhcCCCcCcEEeccCCCCCcccCCcCCCc
Confidence 67777644 346799999999875321 222333333222221110000011233333 245789999999
Q ss_pred eeCCCceEEEEEeeeeCCCCCccceeEEEeccCchhhHHHhhhc
Q 013014 283 LLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKF 326 (451)
Q Consensus 283 lvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~~ 326 (451)
|+. +|+++||+++....++.....+....+....+|+++.++.
T Consensus 181 L~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~~~ 223 (231)
T 2aiq_A 181 LIC-NGQFQGILSVGGNPCAQPRKPGIYTKVFDYTDWIQSIISG 223 (231)
T ss_dssp EEE-TTEEEEEEEEECSSTTCTTCCEEEEEGGGGHHHHHHHHHT
T ss_pred EEE-CCEEEEEEEEeCCCCCCCCCCEEEEEHHHHHHHHHHHHcC
Confidence 996 6899999998744454434456778888899999887664
No 41
>1fuj_A PR3, myeloblastin; hydrolase, serine protease, glycoprotein, zymogen, hydrolase protease); HET: NAG FUC; 2.20A {Homo sapiens} SCOP: b.47.1.2
Probab=99.45 E-value=1.2e-11 Score=115.59 Aligned_cols=164 Identities=19% Similarity=0.225 Sum_probs=105.0
Q ss_pred CeEEEEEEEcCCCeEEecccccCCCC--cEEEEeCC---------CcEEEEEEEEEc------CCCCEEEEEEcCCC---
Q 013014 151 QGSGSGFVWDSKGHVVTNYHVIRGAS--DIRVTFAD---------QSAYDAKIVGFD------QDKDVAVLRIDAPK--- 210 (451)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHVv~~~~--~i~V~~~d---------g~~~~a~vv~~d------~~~DlAlLkv~~~~--- 210 (451)
...|+|.+|+++ +|||+|||+.+.. .+.|.+.. .+.+..+.+..+ ..+|||||+++.+.
T Consensus 26 ~~~CgGtLIs~~-~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~h~y~~~~~~~DiALl~L~~~~~~~ 104 (221)
T 1fuj_A 26 SHFCGGTLIHPS-FVLTAAHCLRDIPQRLVNVVLGAHNVRTQEPTQQHFSVAQVFLNNYDAENKLNDILLIQLSSPANLS 104 (221)
T ss_dssp CCCEEEEEEETT-EEEECGGGGSSSCGGGEEEEESCSBTTSCCTTCEEEEEEEEEECCCBTTTTBCCCEEEEESSCCCCC
T ss_pred CEEEEEEEecCC-EEEEchHhcCcCCCCceEEEEeeeeccCCCCceEEEEEEEEEeCCCCCCCCcccEEEEEeCCccccC
Confidence 357999999987 9999999998643 57777642 234555444443 24599999998764
Q ss_pred CCCcceecCCCC-CCCCCcEEEEeeCCCCCCC-----ceEEeEEeeeeeeeccCCCCCCcccEEEE-----cccCCCCCC
Q 013014 211 DKLRPIPIGVSA-DLLVGQKVYAIGNPFGLDH-----TLTTGVISGLRREISSAATGRPIQDVIQT-----DAAINPGNS 279 (451)
Q Consensus 211 ~~~~~l~l~~s~-~~~~G~~V~~iG~p~g~~~-----~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~-----d~~i~~G~S 279 (451)
....|+.|.... .+..|+.++++||...... ......+.-+ .. .+. ..++.. ....+.|+|
T Consensus 105 ~~v~picL~~~~~~~~~~~~~~~~GwG~~~~~~~~~~~l~~~~~~~~-~~-----~C~--~~~~Ca~~~~~~~~~C~GDS 176 (221)
T 1fuj_A 105 ASVATVQLPQQDQPVPHGTQCLAMGWGRVGAHDPPAQVLQELNVTVV-TF-----FCR--PHNICTFVPRRKAGICFGDS 176 (221)
T ss_dssp SSCCCCBCCCTTCCCCTTCEEEEEESSBSCSSSCBCSBCEEEEEEEE-CT-----TCC--TTEEEEECSSSSCBCCTTCT
T ss_pred CcceeeECCCCcCCCCCCCEEEEEEeCCCCCCCCHHHHhhcccceEE-ee-----ecC--CceeeeccCCCCCCCCCCCC
Confidence 236677775443 3568999999998743321 1222222211 11 111 123322 345789999
Q ss_pred CCceeCCCceEEEEEeeeeCCCCCccceeEEEeccCchhhHHHhh
Q 013014 280 GGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLV 324 (451)
Q Consensus 280 GGPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~ 324 (451)
||||+. +|.++||+++....++.....+....+...++|+++.+
T Consensus 177 GgPL~~-~~~l~Gi~s~~~~gC~~~~~p~vyt~v~~~~~WI~~~i 220 (221)
T 1fuj_A 177 GGPLIC-DGIIQGIDSFVIWGCATRLFPDFFTRVALYVDWIRSTL 220 (221)
T ss_dssp TCEEEE-TTEEEEEEEECSSSTTCSSSCEEEEEGGGGHHHHHHHH
T ss_pred CCeeEE-CCEEeEEEEEeccCCCCCCCCcEEEeHHHHHHHHHHHh
Confidence 999997 78999999974311333334566778888888887654
No 42
>2z7f_E Leukocyte elastase; serine protease, serine protease inhibitor, disease mutation glycoprotein, hydrolase, zymogen, secreted; HET: NAG FUC; 1.70A {Homo sapiens} SCOP: b.47.1.2 PDB: 1h1b_A* 1ppg_E* 1ppf_E* 3q76_A* 3q77_A* 1hne_E 2rg3_A* 1b0f_A*
Probab=99.44 E-value=7.7e-12 Score=116.77 Aligned_cols=164 Identities=15% Similarity=0.208 Sum_probs=105.4
Q ss_pred CeEEEEEEEcCCCeEEecccccCCC--CcEEEEeCC---------CcEEEEEEEEEc------CCCCEEEEEEcCCC---
Q 013014 151 QGSGSGFVWDSKGHVVTNYHVIRGA--SDIRVTFAD---------QSAYDAKIVGFD------QDKDVAVLRIDAPK--- 210 (451)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHVv~~~--~~i~V~~~d---------g~~~~a~vv~~d------~~~DlAlLkv~~~~--- 210 (451)
...|+|.+|+++ +|||+|||+.+. ..+.|.+.. .+.+..+-+..| ..+||||||++.+.
T Consensus 23 ~~~CgGtLI~~~-~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~h~y~~~~~~~DIALl~L~~~~~~~ 101 (218)
T 2z7f_E 23 GHFCGATLIAPN-FVMSAAHCVANVNVRAVRVVLGAHNLSRREPTRQVFAVQRIFENGYDPVNLLNDIVILQLNGSATIN 101 (218)
T ss_dssp EEEEEEEEEETT-EEEECHHHHTTSCGGGCEEEESCSBTTSCCTTCEEEEEEEEEESCCBTTTTBSCCEEEEESSCCCCS
T ss_pred CcEEEEEEccCC-EEEEcHHhcCCCCcCcEEEEEeceecCCCCCceEEEEEEEEEccCCCCCCCCCCEEEEEECCcCcCC
Confidence 357999999987 999999999864 356776643 134555545444 23599999998754
Q ss_pred CCCcceecCCCC-CCCCCcEEEEeeCCCCCCC-----ceEEeEEeeeeeeeccCCCCCCcccEEEE-----cccCCCCCC
Q 013014 211 DKLRPIPIGVSA-DLLVGQKVYAIGNPFGLDH-----TLTTGVISGLRREISSAATGRPIQDVIQT-----DAAINPGNS 279 (451)
Q Consensus 211 ~~~~~l~l~~s~-~~~~G~~V~~iG~p~g~~~-----~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~-----d~~i~~G~S 279 (451)
....|+.|.... .+..|+.++++||...... ......+.-+ .. .+.. .++.. ....+.|+|
T Consensus 102 ~~v~picL~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~-~~-----~C~~--~~~Ca~~~~~~~~~C~GDS 173 (218)
T 2z7f_E 102 ANVQVAQLPAQGRRLGNGVQCLAMGWGLLGRNRGIASVLQELNVTVV-TS-----LCRR--SNVCTLVRGRQAGVCFGDS 173 (218)
T ss_dssp SSCCCCCCCCTTCCCCTTCEEEEEESSBCSSSCCBCSBCEEEEEEEE-CT-----TCCT--TSEEEECTTSCCBCCTTCT
T ss_pred CceeccCcCCCCCCCCCCCEEEEEEeCCCCCCCCccchheEeeeEEe-hh-----HcCc--ceeeeccCCCCCeeCCCcC
Confidence 235677775443 3568999999998743321 2222222222 11 1111 12222 245789999
Q ss_pred CCceeCCCceEEEEEeeeeCCCCCccceeEEEeccCchhhHHHhh
Q 013014 280 GGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLV 324 (451)
Q Consensus 280 GGPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~ 324 (451)
||||+. +|.++||+++....++.....+....+....+|+++.+
T Consensus 174 GgPl~~-~~~l~Gi~S~~~g~C~~~~~p~vyt~V~~~~~WI~~~~ 217 (218)
T 2z7f_E 174 GSPLVC-NGLIHGIASFVRGGCASGLYPDAFAPVAQFVNWIDSII 217 (218)
T ss_dssp TCEEEE-TTEEEEEEEEESSSTTCSSSCEEEEEGGGGHHHHHHHH
T ss_pred CCceEE-ccEEEEEEEeCCccCCCCCCCeEEEEHHHhHHHHHHHh
Confidence 999996 67999999983222443333567788888888887754
No 43
>1npm_A Neuropsin; serine proteinase, glycoprotein; HET: NAG; 2.10A {Mus musculus} SCOP: b.47.1.2
Probab=99.44 E-value=6e-12 Score=118.15 Aligned_cols=169 Identities=20% Similarity=0.263 Sum_probs=106.9
Q ss_pred CeEEEEEEEcCCCeEEecccccCCCCcEEEEeCC---------CcEEEEEEEEEcCC----------CCEEEEEEcCCC-
Q 013014 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD---------QSAYDAKIVGFDQD----------KDVAVLRIDAPK- 210 (451)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHVv~~~~~i~V~~~d---------g~~~~a~vv~~d~~----------~DlAlLkv~~~~- 210 (451)
...|+|.+|+++ +|||+|||+.. .+.|++.. ++.+..+-+..|+. +||||||++.+.
T Consensus 23 ~~~CgGsLI~~~-~VLTAAHC~~~--~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~~DIALl~L~~~~~ 99 (225)
T 1npm_A 23 RLICGGVLVGDR-WVLTAAHCKKQ--KYSVRLGDHSLQSRDQPEQEIQVAQSIQHPCYNNSNPEDHSHDIMLIRLQNSAN 99 (225)
T ss_dssp EEEEEEEEEETT-EEEECGGGCCS--SCEEEESCSBTTC--CCCEEECEEEEEECTTCCSSCTTCCTTCCEEEEESSCCC
T ss_pred ceEEEEEEECCC-EEEEhHHcCCC--CceEEEeeeEcCCCCCCcEEEEEEEEEECCCCCCCCccCccccEEEEeeCCccc
Confidence 357999999987 99999999973 44555432 34455555555543 499999998754
Q ss_pred --CCCcceecCCCCCCCCCcEEEEeeCCCCC------CCceEEeEEeeeeeeeccCC-CCCCcccEEEE----cccCCCC
Q 013014 211 --DKLRPIPIGVSADLLVGQKVYAIGNPFGL------DHTLTTGVISGLRREISSAA-TGRPIQDVIQT----DAAINPG 277 (451)
Q Consensus 211 --~~~~~l~l~~s~~~~~G~~V~~iG~p~g~------~~~~~~G~Vs~~~~~~~~~~-~~~~~~~~i~~----d~~i~~G 277 (451)
....|+.|... ....|+.++++||.... ........+.-+........ .......++.. ....+.|
T Consensus 100 ~~~~v~pi~L~~~-~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~C~G 178 (225)
T 1npm_A 100 LGDKVKPVQLANL-CPKVGQKCIISGWGTVTSPQENFPNTLNCAEVKIYSQNKCERAYPGKITEGMVCAGSSNGADTCQG 178 (225)
T ss_dssp CSSSSCCCEECSS-CCCTTCEEEEEESSCSSSSSCCCCSBCEEEEEEECCHHHHHHHSTTTCCTTEEEEECTTCCBCCTT
T ss_pred CCCceeceECCCC-CCCCCCEEEEEeCCcccCCCCCCCccceEeEEeeecHHHhhHHhCCCCCCCEEeecCCCCCeecCC
Confidence 24678888654 46789999999987531 12233333332222211100 01111234433 3467899
Q ss_pred CCCCceeCCCceEEEEEeeeeCCCCCccceeEEEeccCchhhHHHhh
Q 013014 278 NSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLV 324 (451)
Q Consensus 278 ~SGGPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~ 324 (451)
+|||||+. +|+++||+++....++.....+....+...++|+++.+
T Consensus 179 DSGgPL~~-~~~l~GI~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~~ 224 (225)
T 1npm_A 179 DSGGPLVC-DGMLQGITSWGSDPCGKPEKPGVYTKICRYTTWIKKTM 224 (225)
T ss_dssp CTTCEEEE-TTEEEEEEEECCSSSCBTTBCEEEEEHHHHHHHHHHHH
T ss_pred CCCchheE-CCEEEEEEEeCCCCCCCCCCCeEEEEHHHHHHHHHHHh
Confidence 99999996 68999999987444443334566677777777776643
No 44
>1azz_A Collagenase; complex (serine protease/inhibitor), serine protease, inhibitor, complex, protease-substrate interactions, collagen; 2.30A {Celuca pugilator} SCOP: b.47.1.2
Probab=99.44 E-value=5.8e-12 Score=118.39 Aligned_cols=171 Identities=18% Similarity=0.176 Sum_probs=109.7
Q ss_pred CeEEEEEEEcCCCeEEecccccCCCCcEEEEeCC---------CcEEEEEEEEEcC-------CCCEEEEEEcCCC---C
Q 013014 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD---------QSAYDAKIVGFDQ-------DKDVAVLRIDAPK---D 211 (451)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHVv~~~~~i~V~~~d---------g~~~~a~vv~~d~-------~~DlAlLkv~~~~---~ 211 (451)
...|+|.+|+++ +|||+|||+.+...+.|.+.. ...+..+-+..|+ .+||||||++.+. .
T Consensus 23 ~~~CgGtLI~~~-~VLTAAHC~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DiALl~L~~~~~~~~ 101 (226)
T 1azz_A 23 MYFCGGSLISPE-WILTAAHCMDGAGFVDVVLGAHNIREDEATQVTIQSTDFTVHENYNSFVISNDIAVIRLPVPVTLTA 101 (226)
T ss_dssp TEEEEEEEEETT-EEEECHHHHTTCSCEEEEESCSBSSSCCTTCEEEEECCEEECTTCBTTTTBSCCEEEECSSCCCCCS
T ss_pred cEEEEEEEecCC-EEEEhHHhcCCCCceEEEEcceEcCCCCCccEEEEEEEEEECCCCCCCCCCCceEEEEECCccccCC
Confidence 458999999986 999999999988888887642 2344444455554 3599999998764 2
Q ss_pred CCcceecCCCCCCCCCcEEEEeeCCCCCC------CceEEeEEeeeeeeeccCCCCCCcccEEEE----cccCCCCCCCC
Q 013014 212 KLRPIPIGVSADLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISSAATGRPIQDVIQT----DAAINPGNSGG 281 (451)
Q Consensus 212 ~~~~l~l~~s~~~~~G~~V~~iG~p~g~~------~~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~----d~~i~~G~SGG 281 (451)
...|+.|.... ...|+.+++.||..... .......+.-+.........+.....++.. ....+.|+|||
T Consensus 102 ~v~picL~~~~-~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~~~~Ca~~~~~~~~C~GDSGg 180 (226)
T 1azz_A 102 AIATVGLPSTD-VGVGTVVTPTGWGLPSDSALGISDVLRQVDVPIMSNADCDAVYGIVTDGNICIDSTGGKGTCNGDSGG 180 (226)
T ss_dssp SSCCCBCCSSC-CCTTCEEEEEESSCSSTTCSSSCSBCEECCEEEECHHHHHHHHSCCCTTEEEECCTTTCBCCTTCTTC
T ss_pred CcccccCCCCC-CCCCCEEEEEeCCccCCCCCCCCchhEEeeEEEEChhHhhhhhCcCCCceEeecCCCCCccCCCCCCc
Confidence 46677776444 47899999999874322 122222222222111110000111233433 23578899999
Q ss_pred ceeCCCceEEEEEeeeeC-CCCCccceeEEEeccCchhhHHHhhh
Q 013014 282 PLLDSSGSLIGINTAIYS-PSGASSGVGFSIPVDTVNGIVDQLVK 325 (451)
Q Consensus 282 Plvd~~G~VVGI~s~~~~-~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (451)
||+ .+|.++||+++... .++ ....+....+...++|+++.++
T Consensus 181 PL~-~~~~l~Gi~S~g~~~~C~-~~~p~vyt~V~~~~~WI~~~~~ 223 (226)
T 1azz_A 181 PLN-YNGLTYGITSFGAAAGCE-AGYPDAFTRVTYFLDWIQTQTG 223 (226)
T ss_dssp EEE-ETTEEEEEEEEEETTCTT-SCCCEEEEESGGGHHHHHHHHC
T ss_pred ceE-ECCEEEEEEEEECCCCCC-CCCCCEEEEHHHHHHHHHHHhC
Confidence 999 47899999998763 233 2335667788888888887653
No 45
>1eq9_A Chymotrypsin; FIRE ANT, serine proteinase, hydrolase; HET: PMS; 1.70A {Solenopsis invicta} SCOP: b.47.1.2
Probab=99.43 E-value=3.9e-12 Score=119.23 Aligned_cols=168 Identities=20% Similarity=0.258 Sum_probs=109.4
Q ss_pred eEEEEEEEcCCCeEEecccccCCC---CcEEEEeCC------CcEEEEEEEEEcCC-------CCEEEEEEcCCC---CC
Q 013014 152 GSGSGFVWDSKGHVVTNYHVIRGA---SDIRVTFAD------QSAYDAKIVGFDQD-------KDVAVLRIDAPK---DK 212 (451)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHVv~~~---~~i~V~~~d------g~~~~a~vv~~d~~-------~DlAlLkv~~~~---~~ 212 (451)
..|+|.+|+++ +|||+|||+.+. ..+.|.+.. ++.+..+-+..|+. +|||||+++.+. ..
T Consensus 24 ~~CgGtLIs~~-~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~v~~~~~hp~y~~~~~~~DIALl~L~~~v~~~~~ 102 (222)
T 1eq9_A 24 HRCGASILDNN-NVLTAAHCVDGLSNLNRLKVHVGTNYLSESGDVYDVEDAVVNKNYDDFLLRNDVALVHLTNPIKFNDL 102 (222)
T ss_dssp EEEEEEECSSS-EEEECHHHHTTCSCGGGEEEEESCSBTTSCCEEEEEEEEEECTTCBTTTTBCCCEEEEESSCCCCBTT
T ss_pred eEEEEEEeeCC-EEEEhhhcCCCCCCCceEEEEECceecCCCCeEEEEEEEEECCCCCCCCCCCCEEEEEECCccccCCc
Confidence 57999999976 999999999763 467777642 45566666666653 599999998764 23
Q ss_pred CcceecCCCCCCCCCcEEEEeeCCCCCC-----CceEEeEEeeeeeeecc-CCCCCCcccEEEE----cccCCCCCCCCc
Q 013014 213 LRPIPIGVSADLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISS-AATGRPIQDVIQT----DAAINPGNSGGP 282 (451)
Q Consensus 213 ~~~l~l~~s~~~~~G~~V~~iG~p~g~~-----~~~~~G~Vs~~~~~~~~-~~~~~~~~~~i~~----d~~i~~G~SGGP 282 (451)
..|+.|........|+.+++.||..... .......+.-+...... .... ....++.. ....+.|+||||
T Consensus 103 v~picL~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~-~~~~~~Ca~~~~~~~~C~GDSGgP 181 (222)
T 1eq9_A 103 VQPIKLSTNDEDLESNPCTLTGWGSTRLGGNTPNALQEIELIVHPQKQCERDQWR-VIDSHICTLTKRGEGACHGDSGGP 181 (222)
T ss_dssp BCCCEECSCCTTCTTSEEEEEECCCSSTTCCCCSBCEEEEEEEECHHHHHHHSSS-CCTTEEEECCCTTCBCCTTCTTCE
T ss_pred eEccCCCCCCcCCCCCEEEEEcccccCCCCcccchheEeEEEEeCHHHhCcccCC-CCccEEeecCCCCCeeeeCCccce
Confidence 6788886544446799999999874422 12233333222221111 0000 11233433 235789999999
Q ss_pred eeCCCceEEEEEeeeeCCCCCccceeEEEeccCchhhHHHhh
Q 013014 283 LLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLV 324 (451)
Q Consensus 283 lvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~ 324 (451)
|+. +|.++||+++.. .++. ...+....+....+|+++.+
T Consensus 182 L~~-~~~l~GI~S~g~-~C~~-~~p~vyt~V~~~~~WI~~~~ 220 (222)
T 1eq9_A 182 LVA-NGAQIGIVSFGS-PCAL-GEPDVYTRVSSFVSWINANL 220 (222)
T ss_dssp EEE-TTEEEEEEEECS-TTTS-SSCEEEEEGGGGHHHHHHTS
T ss_pred EEE-CCEEEEEEEECC-CcCC-CCCCEEEEHHHHHHHHHHHh
Confidence 996 689999999864 2332 33566778888888887754
No 46
>2p3w_A Probable serine protease HTRA3; PDZ domain, phage derived high affinity ligand, protein BIND; 1.70A {Homo sapiens}
Probab=99.43 E-value=1.5e-13 Score=115.17 Aligned_cols=93 Identities=27% Similarity=0.408 Sum_probs=79.5
Q ss_pred cccccccccceeccc--hhhhhhC---------ccceEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEcCC
Q 013014 327 GKVTRPILGIKFAPD--QSVEQLG---------VSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSN 395 (451)
Q Consensus 327 g~~~~~~lGi~~~~~--~~~~~~~---------~~Gv~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i~~ 395 (451)
|++.|+|||+.+.+. ..++.++ ..|++|.++.++|||+++||++ ||+|++|||++|.+
T Consensus 1 G~v~~~~lGi~~~~l~~~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGl~~-----------GD~I~~ing~~v~~ 69 (112)
T 2p3w_A 1 GSHMKRFIGIRMRTITPSLVDELKASNPDFPEVSSGIYVQEVAPNSPSQRGGIQD-----------GDIIVKVNGRPLVD 69 (112)
T ss_dssp CCCCEEECCEEEEECCHHHHHHHHHHCTTC--CCSSEEEEEECTTSHHHHHTCCT-----------TCEEEEETTEECCS
T ss_pred CCcccceeeEEEecCCHHHHHHhcccCcCcccCCCCeEEEEECCCChHHHCCCCC-----------CCEEEEECCEECCC
Confidence 567899999998863 3344554 2689999999999999999999 99999999999999
Q ss_pred HHHHHHHHhcCCCCCEEEEEEEECCeEEEEEEEeeecC
Q 013014 396 GSDLYRILDQCKVGDELLLQGIKQPPVLSDNLRLLWSE 433 (451)
Q Consensus 396 ~~dl~~~l~~~~~g~~v~l~v~R~g~~~~~~v~l~~~~ 433 (451)
+.++..++. .|+.+.++|.|+|+.+++++++...+
T Consensus 70 ~~~~~~~l~---~g~~v~l~v~R~g~~~~~~v~~~~~~ 104 (112)
T 2p3w_A 70 SSELQEAVL---TESPLLLEVRRGNDDLLFSIAPEVVM 104 (112)
T ss_dssp HHHHHHHHH---HCSSEEEEEEETTEEEEEEECCEEEC
T ss_pred HHHHHHHHh---CCCeEEEEEEECCEEEEEEEEEeeeC
Confidence 999998884 47889999999999988888876553
No 47
>1mza_A Pro-granzyme K; apoptosis, serine protease, S1 family, hydrolase; 2.23A {Homo sapiens} SCOP: b.47.1.2 PDB: 1mzd_A
Probab=99.43 E-value=1.9e-11 Score=115.67 Aligned_cols=172 Identities=16% Similarity=0.195 Sum_probs=109.4
Q ss_pred CeEEEEEEEcCCCeEEecccccCC---CCcEEEEeCC---------CcEEEEEEEEEcCC-------CCEEEEEEcCCC-
Q 013014 151 QGSGSGFVWDSKGHVVTNYHVIRG---ASDIRVTFAD---------QSAYDAKIVGFDQD-------KDVAVLRIDAPK- 210 (451)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHVv~~---~~~i~V~~~d---------g~~~~a~vv~~d~~-------~DlAlLkv~~~~- 210 (451)
...|+|.+|+++ +|||+|||+.+ ...+.|.+.. .+.+..+-+..++. +|||||+++.+.
T Consensus 25 ~~~CgGtLIs~~-~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~~~ 103 (240)
T 1mza_A 25 HHVCGGVLIDPQ-WVLTAAHCQYRFTKGQSPTVVLGAHSLSKNEASKQTLEIKKFIPFSRVTSDPQSNDIMLVKLQTAAK 103 (240)
T ss_dssp EEEEEEEEEETT-EEEECGGGSCTTCSCSCEEEEESCSBSSSCCTTCEEEEEEEEEECCCSSCSSSSSCCEEEEESSCCC
T ss_pred ceEEEEEEecCC-EEEECHHhCCCCCCCCCeEEEeCceecCCCCCceEEEEEEEEEeCCCccCCCCCceEEEEEeCCCcc
Confidence 357999999986 99999999864 4567777632 23455665555543 599999998754
Q ss_pred --CCCcceecCCCCCCCCCcEEEEeeCCCCCC------CceEEeEEeeeeeeecc----CCCC-CCcccEEEE-----cc
Q 013014 211 --DKLRPIPIGVSADLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISS----AATG-RPIQDVIQT-----DA 272 (451)
Q Consensus 211 --~~~~~l~l~~s~~~~~G~~V~~iG~p~g~~------~~~~~G~Vs~~~~~~~~----~~~~-~~~~~~i~~-----d~ 272 (451)
....|+.|.....+..|+.+++.||..... .......+.-+....+. +... .....++.. ..
T Consensus 104 ~~~~v~pi~l~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~~~~~~~~~Ca~~~~~~~ 183 (240)
T 1mza_A 104 LNKHVKMLHIRSKTSLRSGTKCKVTGWGATDPDSLRPSDTLREVTVTVLSRKLCNSQSYYNGDPFITKDMVCAGDAKGQK 183 (240)
T ss_dssp CBTTBCCCCBCSSCCCCTTCEEEEEECCCSSTTCSSCCSBCEEEEEEECCHHHHTSTTTTTTTTCCCTTEEEEECTTSCC
T ss_pred cCCceeeeecCCcccCCCCCEEEEEeCCcCCCCCCCccccceEeEEEEeCHHHcCCcceeCCCCcCCCCeEeecCCCCCC
Confidence 235677776535577899999999874321 22333333333322221 1000 111234443 23
Q ss_pred cCCCCCCCCceeCCCceEEEEEeeeeCCCCCccceeEEEeccC-chhhHHHhhh
Q 013014 273 AINPGNSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDT-VNGIVDQLVK 325 (451)
Q Consensus 273 ~i~~G~SGGPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~-i~~~l~~l~~ 325 (451)
..+.|+|||||+. +|.++||+++.. .++.....+....+.. ..+||++.++
T Consensus 184 ~~C~GDSGGPL~~-~~~l~Gi~S~g~-~C~~~~~p~vyt~v~~~y~~WI~~~~~ 235 (240)
T 1mza_A 184 DSCKGDAGGPLIC-KGVFHAIVSGGH-ECGVATKPGIYTLLTKKYQTWIKSNLV 235 (240)
T ss_dssp CCCTTCTTCEEEE-TTEEEEEECSSC-CSSCTTCCEEEEECCHHHHHHHHHHTC
T ss_pred ccCCCCCCCeeEE-CCEEEEEEEECC-CCCCCCCCcEEEeChHHHHHHHHHhcc
Confidence 5789999999996 679999999764 3433333455666666 7778777553
No 48
>1fxy_A Coagulation factor XA-trypsin chimera; protease, chloromethylketone, hydrolase-hydrolase I complex; HET: 0G6; 2.15A {Homo sapiens} SCOP: b.47.1.2
Probab=99.43 E-value=7.4e-12 Score=117.76 Aligned_cols=171 Identities=19% Similarity=0.230 Sum_probs=110.4
Q ss_pred CeEEEEEEEcCCCeEEecccccCCCCcEEEEeCC---------CcEEEEEEEEEcCC-------CCEEEEEEcCCC---C
Q 013014 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD---------QSAYDAKIVGFDQD-------KDVAVLRIDAPK---D 211 (451)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHVv~~~~~i~V~~~d---------g~~~~a~vv~~d~~-------~DlAlLkv~~~~---~ 211 (451)
...|+|.+|+++ +|||+|||+.....+.|++.+ .+.+..+.+..|+. +||||||++.+. .
T Consensus 24 ~~~CgGtLI~~~-~VLTAAHC~~~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~~~~ 102 (228)
T 1fxy_A 24 EGFCGGTILSEF-YILTAAHCLYQAKRFKVRVGDRNTEQEEGGEAVHEVEVVIKHNRFTKETYDFDIAVLRLKTPITFRM 102 (228)
T ss_dssp CEEEEEEECSSS-EEEECGGGTTSCSSCEEEEECSCTTTCCCCEEEEEEEEEEECTTCBTTTTBTCCEEEEESSCCCCBT
T ss_pred CeeEEEEEeeCC-EEEECHHHCCCCCcEEEEECccCccccCCCcEEEEEEEEEECCCCCCCCCcCcEEEEEECCcccCCC
Confidence 357999999976 999999999876667776632 13455555666653 599999998764 2
Q ss_pred CCcceecCCCCCCCCCcEEEEeeCCCCCC------CceEEeEEeeeeeeeccCC-CCCCcccEEEE-----cccCCCCCC
Q 013014 212 KLRPIPIGVSADLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISSAA-TGRPIQDVIQT-----DAAINPGNS 279 (451)
Q Consensus 212 ~~~~l~l~~s~~~~~G~~V~~iG~p~g~~------~~~~~G~Vs~~~~~~~~~~-~~~~~~~~i~~-----d~~i~~G~S 279 (451)
...|+.|... ....|+.+++.||..... .......+.-+........ .......++.. ....+.|+|
T Consensus 103 ~v~picLp~~-~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDS 181 (228)
T 1fxy_A 103 NVAPASLPTA-PPATGTKCLISGWGNTASSGADYPDELQCLDAPVLSQAKCEASYPGKITSNMFCVGFLEGGKDSCQGDS 181 (228)
T ss_dssp TBCCCCCCSS-CCCTTCEEEEEESSCCCSSSCCCCSSCEEEEEEBCCHHHHHHHSTTTCCTTEEEESCTTCSCBCCTTCT
T ss_pred ceeccCCCCC-CCCCCCEEEEEecCccCCCCCCCCccceEEEEEEeCHHHhHhhcCCCCCCCEEEeccCCCCCccccCcc
Confidence 3567777543 467899999999874321 1223333332222111100 01111234443 235789999
Q ss_pred CCceeCCCceEEEEEeeeeCCCCCccceeEEEeccCchhhHHHhhh
Q 013014 280 GGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (451)
Q Consensus 280 GGPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (451)
||||+. +++++||+++.. .++.....+....+....+|+++.++
T Consensus 182 GgPL~~-~~~l~Gi~S~g~-~C~~~~~p~vyt~V~~y~~WI~~~~~ 225 (228)
T 1fxy_A 182 GGPVVC-NGQLQGVVSWGD-GCAQKNKPGVYTKVYNYVKWIKNTIA 225 (228)
T ss_dssp TCEEEE-TTEEEEEEEECS-SSSBTTBCEEEEEGGGGHHHHHHHHH
T ss_pred ccceEE-CCEEEEEEEECC-CCCCCCCCEEEEEhHHHHHHHHHHHh
Confidence 999995 679999999864 23323345677888888888887654
No 49
>1lo6_A Kallikrein 6, HK6; serine protease, human kallikrein 6, benzamidine, protease, brain serine protease, myelencephalon specific protease, MSP, ZYME; 1.56A {Homo sapiens} SCOP: b.47.1.2 PDB: 1l2e_A 1gvl_A 4d8n_A*
Probab=99.43 E-value=1.1e-11 Score=116.17 Aligned_cols=170 Identities=20% Similarity=0.273 Sum_probs=108.8
Q ss_pred CeEEEEEEEcCCCeEEecccccCCCCcEEEEeC---------CCcEEEEEEEEEcC-------CCCEEEEEEcCCC---C
Q 013014 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFA---------DQSAYDAKIVGFDQ-------DKDVAVLRIDAPK---D 211 (451)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHVv~~~~~i~V~~~---------dg~~~~a~vv~~d~-------~~DlAlLkv~~~~---~ 211 (451)
...|+|.+|+++ +|||+|||+.. .+.|.+. +++.+..+-+..|+ .+|||||+++.+. .
T Consensus 23 ~~~CgGtLIs~~-~VLTAAHC~~~--~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIAll~L~~~~~~~~ 99 (223)
T 1lo6_A 23 HLLCGGVLIHPL-WVLTAAHCKKP--NLQVFLGKHNLRQRESSQEQSSVVRAVIHPDYDAASHDQDIMLLRLARPAKLSE 99 (223)
T ss_dssp EEEEEEEEEETT-EEEECGGGCCT--TCEEEESCSBTTSCCTTCEEEEEEEEEECTTCCTTTCTTCCEEEEESSCCCCBT
T ss_pred CEEEEeEEecCC-EEEECccCCCC--CeEEEEcceecCCCCCCcEEEEEEEEEECCCCCCCCCcCeEEEEEECCcccCCC
Confidence 357999999986 99999999974 3445442 13445555555665 3599999998764 2
Q ss_pred CCcceecCCCCCCCCCcEEEEeeCCCCCC----CceEEeEEeeeeeeeccCC-CCCCcccEEEE-----cccCCCCCCCC
Q 013014 212 KLRPIPIGVSADLLVGQKVYAIGNPFGLD----HTLTTGVISGLRREISSAA-TGRPIQDVIQT-----DAAINPGNSGG 281 (451)
Q Consensus 212 ~~~~l~l~~s~~~~~G~~V~~iG~p~g~~----~~~~~G~Vs~~~~~~~~~~-~~~~~~~~i~~-----d~~i~~G~SGG 281 (451)
...|+.|... ....|+.+.++||..... .......+.-+........ .......++.. ....+.|+|||
T Consensus 100 ~v~pi~l~~~-~~~~~~~~~v~GwG~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGg 178 (223)
T 1lo6_A 100 LIQPLPLERD-CSANTTSCHILGWGKTADGDFPDTIQCAYIHLVSREECEHAYPGQITQNMLCAGDEKYGKDSCQGDSGG 178 (223)
T ss_dssp TBCCCCBCCC-TTCCCCEEEEEESSCCTTSSCCSBCEEEEEEEECHHHHHHHSTTTCCTTEEEEECTTTCCBCCTTTTTC
T ss_pred ceeecccCCC-CCCCCCEEEEEEECCCCCCCcCceeeEEEEEEeCHHHhhhhhCCCCCCCeEEeecCCCCCeeccccCCC
Confidence 4567777543 357899999999875421 1233333332222211100 01111334443 23578999999
Q ss_pred ceeCCCceEEEEEeeeeCCCCCccceeEEEeccCchhhHHHhhh
Q 013014 282 PLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (451)
Q Consensus 282 Plvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (451)
||+. +|.++||+++....++.....+....+...++|+++.++
T Consensus 179 PL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~i~ 221 (223)
T 1lo6_A 179 PLVC-GDHLRGLVSWGNIPCGSKEKPGVYTNVCRYTNWIQKTIQ 221 (223)
T ss_dssp EEEE-TTEEEEEEEECCSSCCCSSSCEEEEEGGGGHHHHHHHHC
T ss_pred cEEe-CCEEEEEEeeCCCCCCCCCCCcEEEEHHHHHHHHHHHhc
Confidence 9996 679999999864344433445677888888888887654
No 50
>1ao5_A Glandular kallikrein-13; serine protease, protein maturation; HET: NAG; 2.60A {Mus musculus} SCOP: b.47.1.2 PDB: 1sgf_G*
Probab=99.43 E-value=6.4e-12 Score=118.76 Aligned_cols=170 Identities=19% Similarity=0.192 Sum_probs=108.1
Q ss_pred CeEEEEEEEcCCCeEEecccccCCCCcEEEEeCC---------CcEEEEEEEEEcC------------------CCCEEE
Q 013014 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD---------QSAYDAKIVGFDQ------------------DKDVAV 203 (451)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHVv~~~~~i~V~~~d---------g~~~~a~vv~~d~------------------~~DlAl 203 (451)
...|+|.+|+++ +|||+|||+.+ .+.|.+.. ++.+..+-+..|+ .+||||
T Consensus 23 ~~~CgGtLI~~~-~VLTAAHC~~~--~~~v~~G~~~~~~~~~~~~~~~v~~~~~Hp~y~~~~~~~~~~~~~~~~~~DIAL 99 (237)
T 1ao5_A 23 EHICGGVLLDRN-WVLTAAHCYVD--QYEVWLGKNKLFQEEPSAQHRLVSKSFPHPGFNMSLLMLQTIPPGADFSDDLML 99 (237)
T ss_dssp EEEEEEEEEETT-EEEECTTCCCS--SCEEEESCCBSSSCCSSCEECCEEEEEECTTSCGGGGGCSSCCTTCCCTTCCEE
T ss_pred CeEEEEEEeeCC-EEEECHHHCCC--CCEEEecccccccCCCCcEEEEEEEEEcCCCcCcccccccccccccCCCCCEEE
Confidence 357999999987 99999999963 44555432 2334445455554 579999
Q ss_pred EEEcCCC---CCCcceecCCCCCCCCCcEEEEeeCCCCCC------CceEEeEEeeeeeeeccCC-CCCCcccEEEEc--
Q 013014 204 LRIDAPK---DKLRPIPIGVSADLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISSAA-TGRPIQDVIQTD-- 271 (451)
Q Consensus 204 Lkv~~~~---~~~~~l~l~~s~~~~~G~~V~~iG~p~g~~------~~~~~G~Vs~~~~~~~~~~-~~~~~~~~i~~d-- 271 (451)
|+++.+. ....|+.|... ....|+.+.+.||..... .......+.-+........ .......++...
T Consensus 100 l~L~~~~~~~~~v~picL~~~-~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~ 178 (237)
T 1ao5_A 100 LRLSKPADITDVVKPIALPTK-EPKPGSKCLASGWGSITPTRWQKPDDLQCVFITLLPNENCAKVYLQKVTDVMLCAGEM 178 (237)
T ss_dssp EEESSCCCCCSSSCCCCCCCS-CCCTTCEEEEEESCCSSCC-CCCCSBCEEEEEEEECHHHHHHHCSSCCCTTEEEEECT
T ss_pred EEeCCccccCCceeCCCcCCC-CCCCCCEEEEEECCccCCCCCCCCCcccEEEEEecChhHhhhhhcccCCCCEEEEccC
Confidence 9998764 23567777644 467899999999874321 1223333332222111100 001112344332
Q ss_pred ---ccCCCCCCCCceeCCCceEEEEEeeeeCCCCCccceeEEEeccCchhhHHHhhh
Q 013014 272 ---AAINPGNSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (451)
Q Consensus 272 ---~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (451)
...+.|+|||||+. +|.++||+++....++.....+....+....+|+++.++
T Consensus 179 ~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~~ 234 (237)
T 1ao5_A 179 GGGKDTCRDDSGGPLIC-DGILQGTTSYGPVPCGKPGVPAIYTNLIKFNSWIKDTMM 234 (237)
T ss_dssp TCSCBCCTTCTTCEEEE-TTEEEEEEEECCSSTTCTTCCEEEECGGGGHHHHHHHHH
T ss_pred CCCCCCCCCCCcceEEE-CCEEeEEEeEcCCCCCCCCCCcEEEEHHHHHHHHHHHHh
Confidence 35789999999996 789999999874445433445677888888888887654
No 51
>1ton_A Tonin; hydrolase(serine proteinase); 1.80A {Rattus rattus} SCOP: b.47.1.2
Probab=99.42 E-value=9.3e-12 Score=117.50 Aligned_cols=169 Identities=19% Similarity=0.223 Sum_probs=108.9
Q ss_pred eEEEEEEEcCCCeEEecccccCCCCcEEEEeCC---------CcEEEEEEEEEcCC------------------CCEEEE
Q 013014 152 GSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD---------QSAYDAKIVGFDQD------------------KDVAVL 204 (451)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHVv~~~~~i~V~~~d---------g~~~~a~vv~~d~~------------------~DlAlL 204 (451)
..|+|.+|+++ +|||+|||+. ..+.|.+.. ++.+..+-+..|++ +|||||
T Consensus 22 ~~CgGsLIs~~-~VLTAAHC~~--~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~~~~~~~~~~DIALl 98 (235)
T 1ton_A 22 YLCGGVLIDPS-WVITAAHCYS--NNYQVLLGRNNLFKDEPFAQRRLVRQSFRHPDYIPLIVTNDTEQPVHDHSNDLMLL 98 (235)
T ss_dssp SEEEEEEEETT-EEEECGGGCC--SCCEEEESCSBTTSCCTTCEEECEEEEEECTTCCCC--------CCCCSTTCCEEE
T ss_pred CeEEEEEecCC-EEEEcHHhCC--CCcEEEeCcccccCCCCcceEEEEEEEEeCCCCcccccccccccccCCCcCCEEEE
Confidence 47999999986 9999999996 344555422 23444554555543 499999
Q ss_pred EEcCCC---CCCcceecCCCCCCCCCcEEEEeeCCCCCC------CceEEeEEeeeeeeeccCCC-CCCcccEEEE----
Q 013014 205 RIDAPK---DKLRPIPIGVSADLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISSAAT-GRPIQDVIQT---- 270 (451)
Q Consensus 205 kv~~~~---~~~~~l~l~~s~~~~~G~~V~~iG~p~g~~------~~~~~G~Vs~~~~~~~~~~~-~~~~~~~i~~---- 270 (451)
+++.+. ....|+.|... .+..|+.++++||..... .......+.-+......... ......++..
T Consensus 99 ~L~~~~~~~~~v~picL~~~-~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~ 177 (235)
T 1ton_A 99 HLSEPADITGGVKVIDLPTK-EPKVGSTCLASGWGSTNPSEMVVSHDLQCVNIHLLSNEKCIETYKDNVTDVMLCAGEME 177 (235)
T ss_dssp EESSCCCCCSSCCCCCCCCS-CCCTTCEEEEEESSCSSSSSCCCCSBCEEEEEEEECGGGCGGGGSTTGGGGEEEEECTT
T ss_pred EcCCccccCCcceeeeCCCC-CCCCCCEEEEEecCCCCCCCCccCccceEEEEEEeCHHHHHHHhcCcCCCCeEeeccCC
Confidence 998764 24667788644 467899999999875421 12333333333222221111 1111334433
Q ss_pred -cccCCCCCCCCceeCCCceEEEEEeeeeCCCCCccceeEEEeccCchhhHHHhhh
Q 013014 271 -DAAINPGNSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (451)
Q Consensus 271 -d~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (451)
....+.|+|||||+. +|.++||+++....++.....+....+...++|+++.++
T Consensus 178 ~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~~ 232 (235)
T 1ton_A 178 GGKDTCAGDSGGPLIC-DGVLQGITSGGATPCAKPKTPAIYAKLIKFTSWIKKVMK 232 (235)
T ss_dssp CSCBCCTTCTTCEEEE-TTEEEEEECCCCSSCSCTTCCEEEEEGGGGHHHHHHHHH
T ss_pred CCCcCCCCCCccccEE-CCEEEEEEeeCCCCCCCCCCCeEEEEHHHHHHHHHHHHc
Confidence 235789999999996 789999999874445433445677888888999888665
No 52
>3mfj_A Cationic trypsin; serine proteinase, hydrolase; 0.80A {Bos taurus} PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A 1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A* 1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A ...
Probab=99.42 E-value=1.2e-11 Score=115.91 Aligned_cols=169 Identities=18% Similarity=0.196 Sum_probs=108.5
Q ss_pred CeEEEEEEEcCCCeEEecccccCCCCcEEEEeCC---------CcEEEEEEEEEcCC-------CCEEEEEEcCCC---C
Q 013014 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD---------QSAYDAKIVGFDQD-------KDVAVLRIDAPK---D 211 (451)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHVv~~~~~i~V~~~d---------g~~~~a~vv~~d~~-------~DlAlLkv~~~~---~ 211 (451)
...|+|.+|+++ +|||+|||+. ..+.|++.. ++.+..+-+..|+. +||||||++.+. .
T Consensus 22 ~~~CgGsLIs~~-~VLTAAHC~~--~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~~~~~~ 98 (223)
T 3mfj_A 22 YHFCGGSLINSQ-WVVSAAHCYK--SGIQVRLGEDNINVVEGNEQFISASKSIVHPSYNSNTLNNDIMLIKLKSAASLNS 98 (223)
T ss_dssp SEEEEEEEEETT-EEEECGGGCC--SSCEEEESCSSTTSCCSCCEEEEEEEEEECTTCCTTTCTTCCEEEEESSCCCCBT
T ss_pred CeEEEEEEecCC-EEEEhHHhcC--CCcEEEECCceecccCCCcEEEEeeEEEECCCCCCCCCCCCEEEEEeCCCcccCC
Confidence 357999999987 9999999995 445555522 34456665666653 599999998764 2
Q ss_pred CCcceecCCCCCCCCCcEEEEeeCCCCCC------CceEEeEEeeeeeeeccC-CCCCCcccEEEEc-----ccCCCCCC
Q 013014 212 KLRPIPIGVSADLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISSA-ATGRPIQDVIQTD-----AAINPGNS 279 (451)
Q Consensus 212 ~~~~l~l~~s~~~~~G~~V~~iG~p~g~~------~~~~~G~Vs~~~~~~~~~-~~~~~~~~~i~~d-----~~i~~G~S 279 (451)
...|+.|... ....|+.+++.||..... .......+.-+....... ........++... ...+.|+|
T Consensus 99 ~v~picL~~~-~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDS 177 (223)
T 3mfj_A 99 RVASISLPTS-CASAGTQCLISGWGNTKSSGTSYPDVLKCLKAPILSDSSCKSAYPGQITSNMFCAGYLEGGKDSCQGDS 177 (223)
T ss_dssp TBCCCBCCSS-CCCTTCEEEEEESSCCCSSSCCCCSSCEEEEEEBCCHHHHHHHSTTTCCTTEEEESCTTSSCBCCTTCT
T ss_pred cEeeeECCCC-CCCCCCEEEEEeeeccCCCCCcccchheEEEEEEeCHHHhhhhhcCcCCCCEEEccCCCCCCCcCCCCc
Confidence 4677888644 357899999999875421 122333333222211110 0011123444432 35789999
Q ss_pred CCceeCCCceEEEEEeeeeCCCCCccceeEEEeccCchhhHHHhhh
Q 013014 280 GGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (451)
Q Consensus 280 GGPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (451)
||||+. +|+++||+++.. .++.....+....+...++|+++.++
T Consensus 178 GgPL~~-~~~l~GI~S~g~-~C~~~~~p~vyt~V~~~~~WI~~~i~ 221 (223)
T 3mfj_A 178 GGPVVC-SGKLQGIVSWGS-GCAQKNKPGVYTKVCNYVSWIKQTIA 221 (223)
T ss_dssp TCEEEE-TTEEEEEEEECS-SSSBTTBCEEEEEGGGGHHHHHHHHH
T ss_pred ccceEE-CCEEEEEEEECC-CCCCCCCCeEEEEHHHhHHHHHHHHh
Confidence 999996 689999999863 23333345677888888888887654
No 53
>3s69_A Thrombin-like enzyme defibrase; beta-barrel, serine enzymes, fibrinogen binding, glycosylati hydrolase; 1.43A {Gloydius saxatilis} PDB: 1op2_A* 1op0_A* 4gso_A 1bqy_A*
Probab=99.42 E-value=1.5e-11 Score=115.56 Aligned_cols=174 Identities=17% Similarity=0.172 Sum_probs=108.4
Q ss_pred CeEEEEEEEcCCCeEEecccccCCCCcEEEEeCC-------CcE-EEEEEEEEcC-------CCCEEEEEEcCCC---CC
Q 013014 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD-------QSA-YDAKIVGFDQ-------DKDVAVLRIDAPK---DK 212 (451)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHVv~~~~~i~V~~~d-------g~~-~~a~vv~~d~-------~~DlAlLkv~~~~---~~ 212 (451)
...|+|.+|+++ +|||+|||+.....+.+...+ ... ...+.+..++ .+|||||+++.+. ..
T Consensus 23 ~~~CgGtLI~~~-~VLTAAHC~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~DIALl~L~~~v~~~~~ 101 (234)
T 3s69_A 23 GFFCSGTLINEE-WVLTAAHCDNTNFQMKLGVHSKKVLNEDEQTRNPKEKFICPNKKNDEVLDKDIMLIKLDSRVSNSEH 101 (234)
T ss_dssp CEEEEEEEEETT-EEEECGGGCCSSCEEEESCCCSSSCCTTCEEECEEEEEECTTCCTTCTTSSCCEEEEESSCCCCBTT
T ss_pred CeEEeEEEeeCC-EEEEchhhCCCCceEEecccccccccCCcceeeceEEEECCCccCCCCCcccEEEEeeCCcCCCCCc
Confidence 457999999986 999999999754444433221 111 2233343343 3599999998754 24
Q ss_pred CcceecCCCCCCCCCcEEEEeeCCCCCC------CceEEeEEeeeeeeecc--CCCCCCcccEEEE-----cccCCCCCC
Q 013014 213 LRPIPIGVSADLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISS--AATGRPIQDVIQT-----DAAINPGNS 279 (451)
Q Consensus 213 ~~~l~l~~s~~~~~G~~V~~iG~p~g~~------~~~~~G~Vs~~~~~~~~--~~~~~~~~~~i~~-----d~~i~~G~S 279 (451)
..|+.|... ....|+.+.+.||..... .......+.-+...... +........++.. ....+.|+|
T Consensus 102 v~pi~l~~~-~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDS 180 (234)
T 3s69_A 102 IVPLSLPSS-PPSVGSVCHIMGWGSITPIKVTYPDVPYCAYINLLDDAVCQAGYPELLTEYRTLCAGILEGGKDTCGGDS 180 (234)
T ss_dssp BCCCCCCSS-CCCTTCEEEEEESSCSSSSSCCCCSSCEEEEEEEECHHHHHHHCTTCCTTSCEEEEECTTCSCBCCTTCT
T ss_pred ceeeecCCC-CCCCCCEEEEEECCCCCCCCcCcccccceeEEeecCHHHHhhhcccccCCcceEeccCCCCCCccCCCCC
Confidence 567777543 456799999999874322 12222333222222111 1101111233332 345788999
Q ss_pred CCceeCCCceEEEEEeeeeCCCCCccceeEEEeccCchhhHHHhhhcc
Q 013014 280 GGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKFG 327 (451)
Q Consensus 280 GGPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~~g 327 (451)
||||+. +++++||++++...++.....+....+...++||++.++..
T Consensus 181 GgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~i~~~ 227 (234)
T 3s69_A 181 GGPLIC-NGQFQGIVSFGAHPCGQGLKPGVYTKVFDYNHWIQSIIAGN 227 (234)
T ss_dssp TCEEEE-TTEEEEEEEECCSSTTCTTCCEEEEEGGGGHHHHHHHHHTC
T ss_pred ccceEE-cCEEEEEEEEcccccCCCCCCcEEeeHHHHHHHHHHHhcCC
Confidence 999996 67899999987654554445677788899999998877643
No 54
>4e7n_A Snake-venom thrombin-like enzyme; beta-barrel, hydrolase, arginine esterase, glycosylation, extracellular; HET: NAG; 1.75A {Agkistrodon halys}
Probab=99.42 E-value=2.1e-11 Score=114.97 Aligned_cols=174 Identities=18% Similarity=0.170 Sum_probs=109.3
Q ss_pred CeEEEEEEEcCCCeEEecccccCCCCcEEEEeCC------Cc--EEEEEEEEEcC-------CCCEEEEEEcCCC---CC
Q 013014 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD------QS--AYDAKIVGFDQ-------DKDVAVLRIDAPK---DK 212 (451)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHVv~~~~~i~V~~~d------g~--~~~a~vv~~d~-------~~DlAlLkv~~~~---~~ 212 (451)
...|+|.+|+++ +|||+|||+.....+.+...+ .. .+..+.+..++ .+|||||+++.+. ..
T Consensus 25 ~~~CgGtLI~~~-~VLTAAHC~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~DIALl~L~~~v~~~~~ 103 (238)
T 4e7n_A 25 TLFCGGTLINQE-WVLTAAHCDRKNFRIKLGMHSKKVPNEDEQTRVPKEKFFCLSSKNYTLWDKDIMLIRLDSPVKNSKH 103 (238)
T ss_dssp CEEEEEEECSSS-EEEECGGGCCSSCEEEESCSCSSSCCTTCEEECEEEEECSSTTCCCCSSSCCCEEEEESSCCCCBTT
T ss_pred CEEEEEEEecCC-EEEEhHHcCCCCCeEEeceeeccccCCCceeEeeeeeEEcCCCCCCCCCCCcEEEEEeCCCccCCCc
Confidence 457999999986 999999999865444443221 11 12233333343 4599999998654 23
Q ss_pred CcceecCCCCCCCCCcEEEEeeCCCCCC------CceEEeEEeeeeeeeccCCC----CCCcccEEEE-----cccCCCC
Q 013014 213 LRPIPIGVSADLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISSAAT----GRPIQDVIQT-----DAAINPG 277 (451)
Q Consensus 213 ~~~l~l~~s~~~~~G~~V~~iG~p~g~~------~~~~~G~Vs~~~~~~~~~~~----~~~~~~~i~~-----d~~i~~G 277 (451)
..|+.|... ....|+.+.++||..... .......+.-+......... ......++.. ....+.|
T Consensus 104 v~pi~l~~~-~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~G 182 (238)
T 4e7n_A 104 IAPFSLPSS-PPSVGSVCRIMGWGRISPTEGTYPDVPHCVNINLLEYEMCRAPYPEFELPATSRTLCAGILEGGKDTCKG 182 (238)
T ss_dssp BCCCCCCSS-CCCTTCEEEEEESSCSSSSSCCCCSSCEEEEEEEECGGGGTTTCGGGCCCSCCSEEEEECTTCSCBCCTT
T ss_pred eeeeeCCCC-CCCCCCEEEEEECCCCCCCCCCCCccceEeeccccCHHHHhhhcccccCCCCCCeEEeCCCCCCCccCCC
Confidence 567777543 456799999999874321 12333333333332221110 0111233333 2457889
Q ss_pred CCCCceeCCCceEEEEEeeeeCCCCCccceeEEEeccCchhhHHHhhhcc
Q 013014 278 NSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKFG 327 (451)
Q Consensus 278 ~SGGPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~~g 327 (451)
+|||||+. +++++||+++....++.....+....+...++||++.++..
T Consensus 183 DSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~i~~~ 231 (238)
T 4e7n_A 183 DSGGPLIC-NGQFQGIASWGDDPCAQPHKPAAYTKVFDHLDWIENIIAGN 231 (238)
T ss_dssp CTTCEEEE-TTEEEEEEEECCSSTTCTTCCEEEEESGGGHHHHHHHHTTC
T ss_pred CCCcceEE-CCEEEEEEEEeCCCCCCCCCCeEEEEhHHHHHHHHHHHhcC
Confidence 99999996 67999999987654554445677888889999998877643
No 55
>1bru_P Elastase, PPE; serine protease, hydrolase; HET: 1NB; 2.30A {Sus scrofa} SCOP: b.47.1.2
Probab=99.41 E-value=3.1e-11 Score=114.44 Aligned_cols=173 Identities=21% Similarity=0.211 Sum_probs=111.2
Q ss_pred eEEEEEEEcCCCeEEecccccCCCCcEEEEeCC---------CcEEEEEEEEEcCC---------CCEEEEEEcCCC---
Q 013014 152 GSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD---------QSAYDAKIVGFDQD---------KDVAVLRIDAPK--- 210 (451)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHVv~~~~~i~V~~~d---------g~~~~a~vv~~d~~---------~DlAlLkv~~~~--- 210 (451)
..|+|.+|+++ +|||+|||+.....+.|.+.. ++.+..+-+..|+. +||||||++.+.
T Consensus 28 ~~CgGtLI~~~-~VLTAAHC~~~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~DIALl~L~~~v~~~ 106 (241)
T 1bru_P 28 HTCGGTLVDQS-WVLTAAHCISSSRTYRVVLGRHSLSTNEPGSLAVKVSKLVVHQDWNSNQLSNGNDIALLKLASPVSLT 106 (241)
T ss_dssp EEEEEEEEETT-EEEECGGGCCTTSCEEEEESCSBSSSCCTTCEEEEEEEEEECTTCCTTCGGGCCCCEEEEESSCCCCC
T ss_pred eEEEeEEeeCC-EEEEcHHhcccCCceEEEEEcccccCCCCccEEEEEEEEEECCCCCCCCCCCCCcEEEEEeCCCcccC
Confidence 57999999987 999999999865677777642 24566666666653 799999998764
Q ss_pred CCCcceecCCCC-CCCCCcEEEEeeCCCCCC-----CceEEeEEeeeeeeeccCC--CC-CCcccEEEEc----ccCCCC
Q 013014 211 DKLRPIPIGVSA-DLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISSAA--TG-RPIQDVIQTD----AAINPG 277 (451)
Q Consensus 211 ~~~~~l~l~~s~-~~~~G~~V~~iG~p~g~~-----~~~~~G~Vs~~~~~~~~~~--~~-~~~~~~i~~d----~~i~~G 277 (451)
....|+.|.... .+..|+.+++.||..... .......+.-+........ .+ .....++... ...+.|
T Consensus 107 ~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~C~G 186 (241)
T 1bru_P 107 DKIQLGCLPAAGTILPNNYVCYVTGWGRLQTNGASPDILQQGQLLVVDYATCSKPGWWGSTVKTNMICAGGDGIISSCNG 186 (241)
T ss_dssp SSCCCCBCCCTTCCCCTTCEEEEEESCCSSTTSCCCSBCEEEEEEEECHHHHTSTTTTGGGCCTTEEEECCSSSSBCCTT
T ss_pred CccCCcccCCCcCCCCCCCEEEEEEccccCCCCCCCccceeCEEEEecHHHhCcccccCCcCCCceEeecCCCCCccCCC
Confidence 235677775433 356899999999874321 2233333333322222110 00 0112344432 356899
Q ss_pred CCCCceeCC--Cc--eEEEEEeeeeC-CCCCccceeEEEeccCchhhHHHhhh
Q 013014 278 NSGGPLLDS--SG--SLIGINTAIYS-PSGASSGVGFSIPVDTVNGIVDQLVK 325 (451)
Q Consensus 278 ~SGGPlvd~--~G--~VVGI~s~~~~-~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (451)
+|||||+.. +| .++||+++... .++.....+....+....+|+++.++
T Consensus 187 DSGgPL~~~~~~g~~~l~Gi~S~g~~~~C~~~~~p~vyt~V~~~~~WI~~~i~ 239 (241)
T 1bru_P 187 DSGGPLNCQGANGQWQVHGIVSFGSSLGCNYYHKPSVFTRVSNYIDWINSVIA 239 (241)
T ss_dssp CTTCEEEEECTTSCEEEEEEEEECBTTBSSCTTCCEEEEEGGGSHHHHHHHHH
T ss_pred CCCCcEEEECCCCCEEEEEEEEEcCCCCCCCCCCCcEEEEHHHhHHHHHHHHh
Confidence 999999853 56 89999998752 33333345667788888888887654
No 56
>1hj8_A Trypsin I; hydrolase, radiation damage, disulphide bond breakage, salmon, atomic resolution; HET: BAM; 1.00A {Salmo salar} SCOP: b.47.1.2 PDB: 1utm_A 1utj_A 1utl_M* 1utk_A 1bit_A 2sta_E 1bzx_E 2stb_E 2zpq_A 2zps_A 2tbs_A 2zpr_A 1mbq_A 2eek_A
Probab=99.41 E-value=1.5e-11 Score=115.26 Aligned_cols=169 Identities=17% Similarity=0.213 Sum_probs=108.4
Q ss_pred CeEEEEEEEcCCCeEEecccccCCCCcEEEEeC---------CCcEEEEEEEEEcCC-------CCEEEEEEcCCC---C
Q 013014 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFA---------DQSAYDAKIVGFDQD-------KDVAVLRIDAPK---D 211 (451)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHVv~~~~~i~V~~~---------dg~~~~a~vv~~d~~-------~DlAlLkv~~~~---~ 211 (451)
...|+|.+|+++ +|||+|||+.. .+.|++. +++.+..+-+..|++ +||||||++.+. .
T Consensus 22 ~~~CgGsLIs~~-~VLTAAHC~~~--~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~~~~~~ 98 (222)
T 1hj8_A 22 YHFCGGSLVNEN-WVVSAAHCYKS--RVEVRLGEHNIKVTEGSEQFISSSRVIRHPNYSSYNIDNDIMLIKLSKPATLNT 98 (222)
T ss_dssp SEEEEEEEEETT-EEEECGGGCCS--SCEEEESCSBTTSCCSCCEEEEEEEEEECTTCBTTTTBSCCEEEEESSCCCCSS
T ss_pred CcEEEeEEecCC-EEEECHHhcCC--CeEEEEcccccccCCCCcEEEEEEEEEECCCCCCCCCCCcEEEEEECCcccCCC
Confidence 357999999986 99999999974 3444442 234456666666653 599999998764 2
Q ss_pred CCcceecCCCCCCCCCcEEEEeeCCCCCC-----CceEEeEEeeeeeeeccCC-CCCCcccEEEEc-----ccCCCCCCC
Q 013014 212 KLRPIPIGVSADLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISSAA-TGRPIQDVIQTD-----AAINPGNSG 280 (451)
Q Consensus 212 ~~~~l~l~~s~~~~~G~~V~~iG~p~g~~-----~~~~~G~Vs~~~~~~~~~~-~~~~~~~~i~~d-----~~i~~G~SG 280 (451)
...|+.|... .+..|+.+++.||..... .......+.-+........ .......++... ...+.|+||
T Consensus 99 ~v~picL~~~-~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSG 177 (222)
T 1hj8_A 99 YVQPVALPTS-CAPAGTMCTVSGWGNTMSSTADSNKLQCLNIPILSYSDCNNSYPGMITNAMFCAGYLEGGKDSCQGDSG 177 (222)
T ss_dssp SCCCCBCCSS-CCCTTCEEEEEESSCCCCSSCCTTBCEEEEEEBCCHHHHHHHSTTCCCTTEEEESCTTSSCBCCTTCTT
T ss_pred ceeccCCCCC-CCCCCCEEEEEECCCCCCCCCCCceeEEEEEEEcCHHHhhhhccCCCCCCeEEeccCCCCCccCCCCcc
Confidence 3567788543 467899999999875422 1233333332222111100 011112344432 357899999
Q ss_pred CceeCCCceEEEEEeeeeCCCCCccceeEEEeccCchhhHHHhhh
Q 013014 281 GPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (451)
Q Consensus 281 GPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (451)
|||+. +|+++||+++.. .++.....+....+...++|+++.++
T Consensus 178 gPL~~-~~~l~Gi~S~g~-~C~~~~~p~vyt~v~~~~~WI~~~~~ 220 (222)
T 1hj8_A 178 GPVVC-NGELQGVVSWGY-GCAEPGNPGVYAKVCIFNDWLTSTMA 220 (222)
T ss_dssp CEEEE-TTEEEEEEEECS-SSSCTTCCEEEEEGGGGHHHHHHHHH
T ss_pred cceEE-CCEEEEEEeecC-CCCCCCcCcEEEEhHHhHHHHHHHhh
Confidence 99996 689999999864 34333345677888888888887653
No 57
>2bdg_A Kallikrein-4; serine proteinase, S1 subsite, 70-80 loop, structural proteo europe, spine, structural genomics, hydrolase; HET: PBZ; 1.95A {Homo sapiens} PDB: 2bdh_A* 2bdi_A*
Probab=99.41 E-value=1.7e-11 Score=114.92 Aligned_cols=169 Identities=18% Similarity=0.236 Sum_probs=108.2
Q ss_pred CeEEEEEEEcCCCeEEecccccCCCCcEEEEeC----------CCcEEEEEEEEEcCC-------CCEEEEEEcCCC---
Q 013014 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFA----------DQSAYDAKIVGFDQD-------KDVAVLRIDAPK--- 210 (451)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHVv~~~~~i~V~~~----------dg~~~~a~vv~~d~~-------~DlAlLkv~~~~--- 210 (451)
...|+|.+|+++ +|||+|||+.+. +.|.+. +.+.+..+.+..|+. +||||||++.+.
T Consensus 23 ~~~CgGsLIs~~-~VLTAAHC~~~~--~~v~~g~~~~~~~~~~~~~~~~v~~~~~Hp~y~~~~~~~DIALl~L~~~v~~~ 99 (223)
T 2bdg_A 23 ELFCSGVLVHPQ-WVLSAAHCFQNS--YTIGLGLHSLEADQEPGSQMVEASLSVRHPEYNRPLLANDLMLIKLDESVSES 99 (223)
T ss_dssp CEEEEEEEEETT-EEEECGGGCCSS--EEEEESCSBSCGGGCTTCEEEEEEEEEECTTTTSSTTCSCCEEEEESSCCCCC
T ss_pred CEEEEEEEecCC-EEEEhHHhCCCC--eEEEEeeeecCCCCCCCcEEEEEEEEEeCCCCCCCCCcCcEEEEEECCcccCC
Confidence 457999999986 999999999753 444442 123456665666653 599999998764
Q ss_pred CCCcceecCCCCCCCCCcEEEEeeCCCCCCC----ceEEeEEeeeeeeeccCC-CCCCcccEEEEc-----ccCCCCCCC
Q 013014 211 DKLRPIPIGVSADLLVGQKVYAIGNPFGLDH----TLTTGVISGLRREISSAA-TGRPIQDVIQTD-----AAINPGNSG 280 (451)
Q Consensus 211 ~~~~~l~l~~s~~~~~G~~V~~iG~p~g~~~----~~~~G~Vs~~~~~~~~~~-~~~~~~~~i~~d-----~~i~~G~SG 280 (451)
....|+.|... .+..|+.+++.||...... ......+.-+........ .......++... ...+.|+||
T Consensus 100 ~~v~pi~l~~~-~~~~~~~~~v~GwG~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsG 178 (223)
T 2bdg_A 100 DTIRSISIASQ-CPTAGNSCLVSGWGLLANGRMPTVLQCVNVSVVSEEVCSKLYDPLYHPSMFCAGGGQDQKDSCNGDSG 178 (223)
T ss_dssp SSCCCCCBCSS-CCCTTCEEEEEESCCCTTSCCCSBCEEEEEEBCCHHHHHHHSTTTCCTTEEEECCSTTCCBCCTTCTT
T ss_pred CceecccCCCC-CCCCCCEEEEEeCcccCCCCCCCcceEEEEEEeCHHHhhhhhCCCCCCCeEeccCCCCCCCcCCCCCC
Confidence 23567777543 4678999999998754321 222333332222111100 011113344432 357899999
Q ss_pred CceeCCCceEEEEEeeeeCCCCCccceeEEEeccCchhhHHHhh
Q 013014 281 GPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLV 324 (451)
Q Consensus 281 GPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~ 324 (451)
|||+. ++.++||+++....++.....+....+....+|+++.+
T Consensus 179 gPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~i 221 (223)
T 2bdg_A 179 GPLIC-NGYLQGLVSFGKAPCGQVGVPGVYTNLCKFTEWIEKTV 221 (223)
T ss_dssp CEEEE-TTEEEEEEEECCSSTTCTTCCEEEECGGGTHHHHHHHH
T ss_pred chheE-ccEEEEEEEecCCCCCCCCCCcEEEEHHHhHHHHHHHh
Confidence 99996 67999999987544544344567788888888887754
No 58
>1cgh_A Cathepsin G; inflammation, specificity, serine protease, hydrolase-hydrol inhibitor complex; HET: 1ZG; 1.80A {Homo sapiens} SCOP: b.47.1.2 PDB: 1au8_A* 1t32_A* 1kyn_A*
Probab=99.41 E-value=1.7e-11 Score=115.02 Aligned_cols=167 Identities=20% Similarity=0.173 Sum_probs=106.5
Q ss_pred eEEEEEEEcCCCeEEecccccCCCCcEEEEeCC---------CcEEEEEEEEEcCC-------CCEEEEEEcCCC---CC
Q 013014 152 GSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD---------QSAYDAKIVGFDQD-------KDVAVLRIDAPK---DK 212 (451)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHVv~~~~~i~V~~~d---------g~~~~a~vv~~d~~-------~DlAlLkv~~~~---~~ 212 (451)
..|+|.+|+++ +|||+|||+.+ .+.|++.. .+.+..+-+..|+. +||||||++.+. ..
T Consensus 27 ~~CgGsLI~~~-~VLTAAHC~~~--~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~~~~~ 103 (224)
T 1cgh_A 27 SRCGGFLVRED-FVLTAAHCWGS--NINVTLGAHNIQRRENTQQHITARRAIRHPQYNQRTIQNDIMLLQLSRRVRRNRN 103 (224)
T ss_dssp CEEEEEEEETT-EEEECGGGCCS--SEEEEESCSBTTSCCTTCEEEEEEEEEECTTCBTTTTBSCCEEEEESSCCCCBTT
T ss_pred eEEEEEEeeCC-EEEEhHHhCCC--CCEEEEeecccCCCCCccEEEEEEEEEcCCCCCCCCCcCCEEEEEECCCCcCCCc
Confidence 57999999987 99999999986 45555521 34566666666654 499999998764 23
Q ss_pred CcceecCCCC-CCCCCcEEEEeeCCCCCC----CceEEeEEeeeeeeeccCCCC-CCcccEEEEc-----ccCCCCCCCC
Q 013014 213 LRPIPIGVSA-DLLVGQKVYAIGNPFGLD----HTLTTGVISGLRREISSAATG-RPIQDVIQTD-----AAINPGNSGG 281 (451)
Q Consensus 213 ~~~l~l~~s~-~~~~G~~V~~iG~p~g~~----~~~~~G~Vs~~~~~~~~~~~~-~~~~~~i~~d-----~~i~~G~SGG 281 (451)
..|+.|.... .+..|+.+++.||..... .......+.-+.........+ .....++... ...+.|+|||
T Consensus 104 v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~l~~~~~~i~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGg 183 (224)
T 1cgh_A 104 VNPVALPRAQEGLRPGTLCTVAGWGRVSMRRGTDTLREVQLRVQRDRQCLRIFGSYDPRRQICVGDRRERKAAFKGDSGG 183 (224)
T ss_dssp BCCCBCCCTTCCCCTTCEEEEEESCCSSSSCCCSBCEEEEEEBCCHHHHHHHCTTCCTTTEEEECCTTSCCBCCTTCTTC
T ss_pred eEeeECCCCCCCCCCCCEEEEEECCcCCCCCCCCcceEEEEEeeCHHHHHHHhCcCCCcceEeeccCCCCCeEeeCCCcc
Confidence 5677775433 357899999999875431 123333333222211110000 1112244432 3578899999
Q ss_pred ceeCCCceEEEEEeeeeCCCCCccceeEEEeccCchhhHHHhhh
Q 013014 282 PLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (451)
Q Consensus 282 Plvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (451)
||+. +|.++||+++... . ....+....+....+|+++.++
T Consensus 184 PL~~-~~~l~Gi~S~g~~-~--~~~p~vyt~V~~~~~WI~~~~~ 223 (224)
T 1cgh_A 184 PLLC-NNVAHGIVSYGKS-S--GVPPEVFTRVSSFLPWIRTTMR 223 (224)
T ss_dssp EEEE-TTEEEEEEEECCT-T--CCSCEEEEEGGGGHHHHHHHHH
T ss_pred ceEE-ccEEEEEEEEECC-C--CCCCeEEEEHHHhHHHHHHHhh
Confidence 9996 6799999998652 1 2234566778888888877553
No 59
>3s9c_A Vipera russelli proteinase RVV-V gamma; serine proteinase, double six-stranded beta-barrels, hydrola glycosylation; HET: NAG BMA BGC GLC; 1.80A {Daboia russellii siamensis} PDB: 3s9b_A* 3s9a_A* 3sbk_A*
Probab=99.40 E-value=2.5e-11 Score=114.22 Aligned_cols=172 Identities=17% Similarity=0.181 Sum_probs=108.5
Q ss_pred eEEEEEEEcCCCeEEecccccCCCCcEEEEeCC--------CcE--EEEEEEEEcCC-------CCEEEEEEcCCC---C
Q 013014 152 GSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD--------QSA--YDAKIVGFDQD-------KDVAVLRIDAPK---D 211 (451)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHVv~~~~~i~V~~~d--------g~~--~~a~vv~~d~~-------~DlAlLkv~~~~---~ 211 (451)
..|+|.+|+++ +|||+|||+... +.|.+.. ... +....+..++. +|||||+++.+. .
T Consensus 26 ~~CgGtLI~~~-~VLTAAHC~~~~--~~v~~g~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~DIALl~L~~~v~~~~ 102 (234)
T 3s9c_A 26 IHCAGALINRE-WVLTAAHCDRRN--IRIKLGMHSKNIRNEDEQIRVPRGKYFCLNTKFPNGLDKDIMLIRLRRPVTYST 102 (234)
T ss_dssp EEEEEEEEETT-EEEECGGGCCTT--EEEEESCSSSSSCCTTCEEECEEEEECCSSCSSTTCGGGCCEEEEESSCCCCBT
T ss_pred EEEeeEEeeCC-EEEEchhhcCCC--ceEEEeecccccccCCcceEEeeeEEEeCCCCCCCCCcCceEEEEECCccccCC
Confidence 46999999987 999999999753 4444421 111 22223333433 499999998754 2
Q ss_pred CCcceecCCCCCCCCCcEEEEeeCCCCCC----CceEEeEEeeeeeeeccCCCC--CCcccEEEE-----cccCCCCCCC
Q 013014 212 KLRPIPIGVSADLLVGQKVYAIGNPFGLD----HTLTTGVISGLRREISSAATG--RPIQDVIQT-----DAAINPGNSG 280 (451)
Q Consensus 212 ~~~~l~l~~s~~~~~G~~V~~iG~p~g~~----~~~~~G~Vs~~~~~~~~~~~~--~~~~~~i~~-----d~~i~~G~SG 280 (451)
...|+.|... ....|+.+.++||..... .......+.-+.......... .....++.. ....+.|+||
T Consensus 103 ~v~pi~L~~~-~~~~~~~~~v~GwG~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSG 181 (234)
T 3s9c_A 103 HIAPVSLPSR-SRGVGSRCRIMGWGKISTTTYPDVPHCTNIFIVKHKWCEPLYPWVPADSRTLCAGILKGGRDTCHGDSG 181 (234)
T ss_dssp TBCCCBCCSS-CCCTTCEEEEEESSCSBTTBCCSSCEEEEEEEECGGGTTTTCTTSCTTSSEEEEECTTSSCBCCTTCTT
T ss_pred cccccccCCC-CCCCCCeEEEEeeCCCCCCCCCccccccceEecCHHHhhhcccCCCCCcceEEeecCCCCCccCCCCCC
Confidence 4667787544 456799999999874322 122333333232222211111 111233433 2457889999
Q ss_pred CceeCCCceEEEEEeeeeCCCCCccceeEEEeccCchhhHHHhhhccc
Q 013014 281 GPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKFGK 328 (451)
Q Consensus 281 GPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~~g~ 328 (451)
|||+. +++++||+++....++.....+....+...++||++.++..+
T Consensus 182 gPl~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~i~~~~ 228 (234)
T 3s9c_A 182 GPLIC-NGEMHGIVAGGSEPCGQHLKPAVYTKVFDYNNWIQSIIAGNR 228 (234)
T ss_dssp CEEEE-TTEEEEEEEECCSSTTCTTCCEEEEEGGGGHHHHHHHHHTCS
T ss_pred CeEEE-eCCcEEEEEEeCCCCCCCCCCcEEEEhHHhHHHHHHHHcCCC
Confidence 99996 678999999876545544456778888999999998876543
No 60
>3h7t_A Group 3 allergen smipp-S YVT004A06; hydrolase; 2.00A {Sarcoptes scabiei type hominis}
Probab=99.40 E-value=9.7e-12 Score=116.82 Aligned_cols=172 Identities=17% Similarity=0.177 Sum_probs=110.4
Q ss_pred CeEEEEEEEcCCCeEEecccccCC--CCcEEEEeCC------CcEEEEEEEEEc------CCCCEEEEEEcCCCC----C
Q 013014 151 QGSGSGFVWDSKGHVVTNYHVIRG--ASDIRVTFAD------QSAYDAKIVGFD------QDKDVAVLRIDAPKD----K 212 (451)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHVv~~--~~~i~V~~~d------g~~~~a~vv~~d------~~~DlAlLkv~~~~~----~ 212 (451)
...|+|.+|+++ +|||+|||+.+ ...+.|.+.. +..+..+-+..+ ..+|||||+++.+.. .
T Consensus 23 ~~~CgGtLIs~~-~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~v~~i~~h~y~~~~~~~DiAll~L~~~v~~~~~~ 101 (235)
T 3h7t_A 23 KPFCGGSILTAN-FVITAAQCVDGTKPSDISIHYGSSYRTTKGTSVMAKKIYIVRYHPLTMQNNYAVIETEMPIKLDDKT 101 (235)
T ss_dssp SCCEEEEESSSS-EEEECHHHHTTCCGGGEEEEESCSBSSSSSEEEEEEEEEECSCBTTTTBTCCEEEEESSCCCCCSSS
T ss_pred CceEeEEEeeCC-EEEECHHHCCCCCCCeeEEEcCccccccCCceeeeeeEEeeecCCCCCCCCeEEEEeccccccCCcc
Confidence 347999999987 99999999964 4567777643 244555544443 235999999987642 4
Q ss_pred CcceecCCCC-CCCCCcEEEEeeCCCCCC------CceEEeEEeeeeeeeccC--CCC----CCcccEEEE-----cccC
Q 013014 213 LRPIPIGVSA-DLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISSA--ATG----RPIQDVIQT-----DAAI 274 (451)
Q Consensus 213 ~~~l~l~~s~-~~~~G~~V~~iG~p~g~~------~~~~~G~Vs~~~~~~~~~--~~~----~~~~~~i~~-----d~~i 274 (451)
..|+.|.... .+..|+.+++.||..... .......+.-+....... ... .....++.. ....
T Consensus 102 v~pi~Lp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~ 181 (235)
T 3h7t_A 102 TKKIELPSLLYDPEPDTSVLVSGWGSTNFKSLEYSGDLMEANFTVVDRKSCEEQYKQIEADKYIYDGVFCAGGEYDETYI 181 (235)
T ss_dssp CCCCBCCCTTCCCCTTCEEEEEECCCSSTTCCCCCSBCEEEEEEEECHHHHHHHHHTTTCGGGCSTTEEEECBTTTTBBC
T ss_pred ccceecCccccCCCCCCeEEEEecCCCCCCCCchhHHHhhCCCceeCHHHHHHHhhhcccCccccCCeEecCCCCCCCcc
Confidence 5677775432 267899999999874321 223333333222221110 000 011234443 3457
Q ss_pred CCCCCCCceeCCCceEEEEEeeeeCCCCCccceeEEEeccCchhhHHHhhhc
Q 013014 275 NPGNSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKF 326 (451)
Q Consensus 275 ~~G~SGGPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~~ 326 (451)
+.|+|||||+. +|+++||+++... ++. ...+....+....+||++.++.
T Consensus 182 C~GDsGgPl~~-~~~l~Gi~S~g~~-C~~-~~p~vyt~v~~~~~WI~~~i~~ 230 (235)
T 3h7t_A 182 GYGDAGDPAVQ-NGTLVGVASYISS-MPS-EFPSVFLRVGYYVLDIKDIISG 230 (235)
T ss_dssp CTTCTTCEEEE-TTEEEEEECCCTT-CCT-TSCEEEEEGGGGHHHHHHHHTT
T ss_pred ccCCCCCceee-CCeEEEEEEecCC-CCC-CCCceEEEHHHHHHHHHHHHhC
Confidence 78999999996 7899999998643 433 4466778888889999887653
No 61
>2psx_A Kallikrein-5; zinc inhibition, stratum corneum, glcosylation, hydrolase, H hydrolase inhibitor complex; HET: AR7 NAG; 2.30A {Homo sapiens} PDB: 2psy_A*
Probab=99.40 E-value=1.9e-11 Score=114.82 Aligned_cols=170 Identities=17% Similarity=0.190 Sum_probs=108.2
Q ss_pred CeEEEEEEEcCCCeEEecccccCCCCcEEEEeC----------CCcEEEEEEEEEcC-------CCCEEEEEEcCCC---
Q 013014 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFA----------DQSAYDAKIVGFDQ-------DKDVAVLRIDAPK--- 210 (451)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHVv~~~~~i~V~~~----------dg~~~~a~vv~~d~-------~~DlAlLkv~~~~--- 210 (451)
...|+|.+|+++ +|||+|||+... +.|++. ..+.+..+-+..|+ .+||||||++.+.
T Consensus 24 ~~~CgGtLIs~~-~VLTAAHC~~~~--~~v~~G~~~~~~~~~~~~~~~~v~~~~~Hp~y~~~~~~~DIALl~L~~~~~~~ 100 (227)
T 2psx_A 24 QLYCGAVLVHPQ-WLLTAAHCRKKV--FRVRLGHYSLSPVYESGQQMFQGVKSIPHPGYSHPGHSNDLMLIKLNRRIRPT 100 (227)
T ss_dssp EEEEEEEEEETT-EEEECGGGCCSS--CEEEESCCBSSCCCCTTCEEEEEEEEEECTTCCSSSCTTCCEEEEESSCCCCC
T ss_pred CceEEEEEEcCC-EEEEhHHcCCCC--cEEEEeeeecccCCCCCcEEEEEEEEEeCCCCCCCCCCCCEEEEEeCCCCCCC
Confidence 357999999986 999999999854 344432 12345555555554 3599999998754
Q ss_pred CCCcceecCCCCCCCCCcEEEEeeCCCCCC------CceEEeEEeeeeeeeccCCC-CCCcccEEEEc----ccCCCCCC
Q 013014 211 DKLRPIPIGVSADLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISSAAT-GRPIQDVIQTD----AAINPGNS 279 (451)
Q Consensus 211 ~~~~~l~l~~s~~~~~G~~V~~iG~p~g~~------~~~~~G~Vs~~~~~~~~~~~-~~~~~~~i~~d----~~i~~G~S 279 (451)
....|+.|.. ..+..|+.++++||..... .......+.-+......... ......++... ...+.|+|
T Consensus 101 ~~v~pi~l~~-~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~C~GDS 179 (227)
T 2psx_A 101 KDVRPINVSS-HCPSAGTKCLVSGWGTTKSPQVHFPKVLQCLNISVLSQKRCEDAYPRQIDDTMFCAGDKAGRDSCQGDS 179 (227)
T ss_dssp SSSCCCCBCS-SCCCTTCEEEEEESSCSSSSSCCCCSBCEEEEEEBCCHHHHHHHSTTTCCTTEEEECCSTTCBCCTTCT
T ss_pred CceeeeECCC-CCCCCCCEEEEEeCcccCCCCCCCCchheEEEEEecCHhHhhhhcCCCCCCCEEcccCCCCCccCCCCC
Confidence 2467788864 4567899999999875332 12233333322221111000 01112344332 35788999
Q ss_pred CCceeCCCceEEEEEeeeeCCCCCccceeEEEeccCchhhHHHhhh
Q 013014 280 GGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (451)
Q Consensus 280 GGPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (451)
||||+. ++.++||+++....++.....+....+...++|+++.++
T Consensus 180 GgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~~ 224 (227)
T 2psx_A 180 GGPVVC-NGSLQGLVSWGDYPCARPNRPGVYTNLCKFTKWIQETIQ 224 (227)
T ss_dssp TCEEEE-TTEEEEEEEECCSSTTCTTCCEEEEEGGGCHHHHHHHHH
T ss_pred Ccceee-CCEEEEEEeecCCCCCCCCCCcEEEEHHHhHHHHHHHHh
Confidence 999996 579999999864344433445677888888888887664
No 62
>2qxi_A Kallikrein-7; S1 pocket, chloromethyl ketone, alternate conformations, alternative splicing, glycoprotein, hydrolase, protease, secreted; HET: K7J; 1.00A {Homo sapiens} PDB: 2qxg_A* 2qxh_A* 2qxj_A* 3bsq_A
Probab=99.40 E-value=1.4e-11 Score=115.54 Aligned_cols=168 Identities=14% Similarity=0.175 Sum_probs=107.9
Q ss_pred EEEEEEEcCCCeEEecccccCCCCcEEEEeCC-------CcEEEEEEEEEcCC-------CCEEEEEEcCCC---CCCcc
Q 013014 153 SGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD-------QSAYDAKIVGFDQD-------KDVAVLRIDAPK---DKLRP 215 (451)
Q Consensus 153 ~GSGfiI~~~G~ILT~aHVv~~~~~i~V~~~d-------g~~~~a~vv~~d~~-------~DlAlLkv~~~~---~~~~~ 215 (451)
.|+|.+|+++ +|||+|||+. ..+.|.+.. ++.+..+-+..|+. +|||||+++.+. ....|
T Consensus 25 ~CgGtLI~~~-~VLTAAHC~~--~~~~v~~G~~~~~~~~~~~~~v~~~~~Hp~y~~~~~~~DIALl~L~~~~~~~~~v~p 101 (224)
T 2qxi_A 25 HCGGVLVNER-WVLTAAHCKM--NEYTVHLGSDTLGDRRAQRIKASKSFRHPGYSTQTHVNDLMLVKLNSQARLSSMVKK 101 (224)
T ss_dssp EEEEEEEETT-EEEECGGGCC--SCEEEEESCSBTTCTTSEEEEECEEEECTTCCTTTCTTCCEEEECSSCCCCBTTBCC
T ss_pred EEEEEEecCC-EEEEhHHcCC--CCcEEEEeeeecCCCccEEEEEEEEEECCCCCCCCCcCcEEEEEeCCCCcCCCceee
Confidence 7999999987 9999999995 456666632 23455555566653 599999998764 24667
Q ss_pred eecCCCCCCCCCcEEEEeeCCCCCC------CceEEeEEeeeeeeeccCC-CCCCcccEEEEc-----ccCCCCCCCCce
Q 013014 216 IPIGVSADLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISSAA-TGRPIQDVIQTD-----AAINPGNSGGPL 283 (451)
Q Consensus 216 l~l~~s~~~~~G~~V~~iG~p~g~~------~~~~~G~Vs~~~~~~~~~~-~~~~~~~~i~~d-----~~i~~G~SGGPl 283 (451)
+.|.... ...|+.++++||..... .......+.-+........ .......++... ...+.|+|||||
T Consensus 102 icL~~~~-~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL 180 (224)
T 2qxi_A 102 VRLPSRC-EPPGTTCTVSGWGTTTSPDVTFPSDLMCVDVKLISPQDCTKVYKDLLENSMLCAGIPDSKKNACNGDSGGPL 180 (224)
T ss_dssp CCCCSSC-CCTTCEEEEEESSCSSSSSCCCCSBCEEEEEEEECHHHHHHHHGGGCCTTEEEEECTTCCCBCCTTCTTCEE
T ss_pred EECCCCC-CCCCCEEEEEeCCccCCCCCCCChhheEEEeeecCHHHhhHHhcCcCCCCeEEecCCCCCCccCCCCccccE
Confidence 7775443 56899999999875421 1222222322221111000 000112334332 357899999999
Q ss_pred eCCCceEEEEEeeeeCCCCCccceeEEEeccCchhhHHHhhh
Q 013014 284 LDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (451)
Q Consensus 284 vd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (451)
+. +|+++||+++....++.....+....+...++|+++.++
T Consensus 181 ~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~~ 221 (224)
T 2qxi_A 181 VC-RGTLQGLVSWGTFPCGQPNDPGVYTQVCKFTKWINDTMK 221 (224)
T ss_dssp EE-TTEEEEEEEECCSSSCCTTCCEEEEEGGGSHHHHHHHHH
T ss_pred EE-CCEEEEEEEeCCCCCCCCCCCeEEEEHHHHHHHHHHHHh
Confidence 96 789999999864344433345677888888888887664
No 63
>1elt_A Elastase; serine proteinase; 1.61A {Salmo salar} SCOP: b.47.1.2
Probab=99.40 E-value=1.8e-11 Score=115.59 Aligned_cols=171 Identities=18% Similarity=0.213 Sum_probs=109.4
Q ss_pred eEEEEEEEcCCCeEEecccccCCCCcEEEEeCC---------CcEEEEEEEEEcC---------CCCEEEEEEcCCC---
Q 013014 152 GSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD---------QSAYDAKIVGFDQ---------DKDVAVLRIDAPK--- 210 (451)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHVv~~~~~i~V~~~d---------g~~~~a~vv~~d~---------~~DlAlLkv~~~~--- 210 (451)
..|+|.+|+++ +|||+|||+.+...+.|.+.. .+.+..+-+..|+ .+||||||++.+.
T Consensus 28 ~~CgGtLIs~~-~VLTAAHC~~~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~~DiALl~L~~~~~~~ 106 (236)
T 1elt_A 28 HTCGGSLIRQG-WVMTAAHCVDSARTWRVVLGEHNLNTNEGKEQIMTVNSVFIHSGWNSDDVAGGYDIALLRLNTQASLN 106 (236)
T ss_dssp EEEEEEEEETT-EEEECHHHHSSCCCEEEEESCSBTTSCCSCCEEECEEEEEECTTCCTTCGGGCCCCEEEEESSCCCCS
T ss_pred eEEEEEEEeCC-EEEECHHhhCCcCceEEEEccccCCCCCCCcEEEEEEEEEECCCCCCCCCCCCccEEEEECCCCCccC
Confidence 47999999987 999999999987788887743 2345566566664 5699999998654
Q ss_pred CCCcceecCCCC-CCCCCcEEEEeeCCCCCC-----CceEEeEEeeeeeeeccCC--CC-CCcccEEEEc---ccCCCCC
Q 013014 211 DKLRPIPIGVSA-DLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISSAA--TG-RPIQDVIQTD---AAINPGN 278 (451)
Q Consensus 211 ~~~~~l~l~~s~-~~~~G~~V~~iG~p~g~~-----~~~~~G~Vs~~~~~~~~~~--~~-~~~~~~i~~d---~~i~~G~ 278 (451)
....|+.|.... .+..|+.+.++||..... .......+.-+........ .+ .....++... ...+.|+
T Consensus 107 ~~v~picL~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~C~GD 186 (236)
T 1elt_A 107 SAVQLAALPPSNQILPNNNPCYITGWGKTSTGGPLSDSLKQAWLPSVDHATCSSSGWWGSTVKTTMVCAGGGANSGCNGD 186 (236)
T ss_dssp SSCCCCCCCCTTCCCCTTCCEEEEESCCSSTTCCCCSBCEEEECCEECHHHHTSTTTTGGGSCTTEEEECCSSCBCCTTC
T ss_pred CcEEeccCCCccccCCCCCEEEEEeCCCcCCCCCcChhheEeEeeecCHHHhccccccCCcCCcceEEecCCCCccCCCC
Confidence 235677775443 356799999999875422 1222332222222211110 00 0112334332 4568999
Q ss_pred CCCceeCC-Cc--eEEEEEeeeeC-CCCCccceeEEEeccCchhhHHHh
Q 013014 279 SGGPLLDS-SG--SLIGINTAIYS-PSGASSGVGFSIPVDTVNGIVDQL 323 (451)
Q Consensus 279 SGGPlvd~-~G--~VVGI~s~~~~-~~~~~~~~~~aIP~~~i~~~l~~l 323 (451)
|||||+-. +| .++||+++... .++.....+....+....+|+++.
T Consensus 187 SGgPL~~~~~g~~~l~Gi~S~g~~~~C~~~~~p~vyt~V~~~~~WI~~~ 235 (236)
T 1elt_A 187 SGGPLNCQVNGSYYVHGVTSFVSSSGCNASKKPTVFTRVSAYISWMNGI 235 (236)
T ss_dssp TTCEEEEEETTEEEEEEEEEECCSSCTTCTTCCEEEEEGGGGHHHHHHH
T ss_pred CCCeeEEEECCEEEEEEEEEEeCCCCCCCCCCCeEEEEHHHhHHHHHhh
Confidence 99999864 56 89999998642 344334456677777777877653
No 64
>2i4s_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.92A {Vibrio cholerae} SCOP: b.36.1.5
Probab=99.40 E-value=3.1e-13 Score=112.08 Aligned_cols=101 Identities=14% Similarity=0.142 Sum_probs=86.5
Q ss_pred cCchhhHHHhhhccccccccccceeccchhhhhhCccceEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEc
Q 013014 314 DTVNGIVDQLVKFGKVTRPILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKV 393 (451)
Q Consensus 314 ~~i~~~l~~l~~~g~~~~~~lGi~~~~~~~~~~~~~~Gv~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i 393 (451)
+.++++.++++++++..+.++|+...... ..+.|+.|....+.++|+++||++ ||+|++|||++|
T Consensus 5 ~~~~~~~~~l~~~~~~~~~~~g~~~~~~~----~~~~G~~V~~~~pas~A~~aGl~~-----------GDvI~~ing~~v 69 (105)
T 2i4s_A 5 DKVDAIREAIARNPQEIFQYVRLSQVKRD----DKVLGYRVSPGKDPVLFESIGLQD-----------GDMAVALNGLDL 69 (105)
T ss_dssp HHHHHHHHHHHHSGGGHHHHEEEEEEEET----TEEEEEEEEECSCTHHHHHHTCCT-----------TCEEEEETTEET
T ss_pred HHHHHHHHHHHHCHHHHHhhceeEEEecC----CcEEEEEEecCCCCCHHHHcCCCC-----------CCEEEEECCEEC
Confidence 45778899999999999999998764321 124688888888888999999999 999999999999
Q ss_pred CCHHHHHHHHhcCCCCCEEEEEEEECCeEEEEEEEe
Q 013014 394 SNGSDLYRILDQCKVGDELLLQGIKQPPVLSDNLRL 429 (451)
Q Consensus 394 ~~~~dl~~~l~~~~~g~~v~l~v~R~g~~~~~~v~l 429 (451)
.++.|+.+++...++|++++++|.|+|+.++++++|
T Consensus 70 ~~~~d~~~~~~~~~~g~~v~l~v~R~g~~~~~~v~l 105 (105)
T 2i4s_A 70 TDPNVMNTLFQSMNEMTEMSLTVERDGQQHDVYIQF 105 (105)
T ss_dssp TSTTHHHHHHHHHTTCSEEEEEEEETTEEEEEEEEC
T ss_pred CCHHHHHHHHHhcCCCCeEEEEEEECCEEEEEEEeC
Confidence 999999998887678999999999999988887764
No 65
>4ag1_A Chymase; hydrolase-de novo protein complex, inhibitor, serine proteas; 1.40A {Homo sapiens} PDB: 4afs_A 4afu_A 4afz_A* 4afq_A 4ag2_A* 1nn6_A* 1klt_A* 3n7o_A* 1t31_A* 1pjp_A* 2hvx_A* 3s0n_A* 2rdl_A
Probab=99.40 E-value=5.3e-11 Score=111.44 Aligned_cols=168 Identities=17% Similarity=0.130 Sum_probs=105.9
Q ss_pred CeEEEEEEEcCCCeEEecccccCCCCcEEEEeCC---------CcEEEEEEEEEcCC-------CCEEEEEEcCCC---C
Q 013014 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD---------QSAYDAKIVGFDQD-------KDVAVLRIDAPK---D 211 (451)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHVv~~~~~i~V~~~d---------g~~~~a~vv~~d~~-------~DlAlLkv~~~~---~ 211 (451)
...|+|.+|+++ +|||+|||+.. .+.|.+.. .+.+...-+..|+. +||||||++.+. .
T Consensus 27 ~~~CgGtLI~~~-~VLTAAhC~~~--~~~v~~G~~~~~~~~~~~~~~~v~~~~~hp~y~~~~~~~DIALl~L~~~~~~~~ 103 (226)
T 4ag1_A 27 SKFCGGFLIRRN-FVLTAAHCAGR--SITVTLGAHNITEEEDTWQKLEVIKQFRHPKYNTSTLHHDIMLLKLKEKASLTL 103 (226)
T ss_dssp CEEEEEEEEETT-EEEECGGGCCS--EEEEEESCSBTTSCCTTCEEEEEEEEEECTTCCTTTCTTCCEEEEESSCCCCCS
T ss_pred ccEEEEEEEeCC-EEEECcccCCC--CeEEEeCCcccCCCCCcceEEEEEEEEeCCCCCCCCCcCcEEEEEECCCCccCC
Confidence 457999999987 99999999954 55665532 13456666666765 599999998753 2
Q ss_pred CCcceecCCCC-CCCCCcEEEEeeCCCCCC-----CceEEeEEeeeeeeeccCCCCCCcccEEEE-----cccCCCCCCC
Q 013014 212 KLRPIPIGVSA-DLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISSAATGRPIQDVIQT-----DAAINPGNSG 280 (451)
Q Consensus 212 ~~~~l~l~~s~-~~~~G~~V~~iG~p~g~~-----~~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~-----d~~i~~G~SG 280 (451)
...++.|.... .+..|+.+.+.||..... .......+.-+................+.. ....+.|+||
T Consensus 104 ~v~pi~l~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~Ca~~~~~~~~~C~GDsG 183 (226)
T 4ag1_A 104 AVGTLPFPSQFNFVPPGRMCRVAGWGRTGVLKPGSDTLQEVKLRLMDPQACSHFRDFDHNLQLCVGNPRKTKSAFKGDSG 183 (226)
T ss_dssp SSCCCCCC-----CCTTCEEEEEESSBSSTTSCBCSBCEEEEEEEECGGGGTTSTTCCTTTEEEESCTTSCCBCCTTCTT
T ss_pred ceeccccCCcccCCCCCCEEEEEECCCCCCCCCCCCEeEEEEEEEcChHHcccccCcCccceEeeccCCCCCcCccCCCC
Confidence 34566664332 356899999999874321 223333333333322221111112334433 2356789999
Q ss_pred CceeCCCceEEEEEeeeeCCCCCccceeEEEeccCchhhHHHhhh
Q 013014 281 GPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (451)
Q Consensus 281 GPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (451)
|||+. ++.++||+++... +... .+....+...++||++.++
T Consensus 184 gPl~~-~~~l~Gi~S~g~~-c~~~--p~vyt~v~~~~~WI~~~i~ 224 (226)
T 4ag1_A 184 GPLLC-AGVAQGIVSYGRS-DAKP--PAVFTRISHYRPWINQILQ 224 (226)
T ss_dssp CEEEE-TTEEEEEEEECBT-TCCS--CEEEEEHHHHHHHHHHHHH
T ss_pred CceEE-cCEEEEEEEECCC-CCCC--CCEEEEhHHHHHHHHHHHh
Confidence 99996 7799999998754 2222 5667777788888887654
No 66
>1iau_A Granzyme B; hydrolase-hydrolase inhibitor complex; HET: ASJ NAG FUC MAN BMA; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1fq3_A* 1fi8_A 3tk9_A 3tju_A 3tjv_A
Probab=99.40 E-value=2.8e-11 Score=113.68 Aligned_cols=167 Identities=17% Similarity=0.149 Sum_probs=106.2
Q ss_pred eEEEEEEEcCCCeEEecccccCCCCcEEEEeCC---------CcEEEEEEEEEcCC-------CCEEEEEEcCCC---CC
Q 013014 152 GSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD---------QSAYDAKIVGFDQD-------KDVAVLRIDAPK---DK 212 (451)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHVv~~~~~i~V~~~d---------g~~~~a~vv~~d~~-------~DlAlLkv~~~~---~~ 212 (451)
..|+|.+|+++ +|||+|||+.+ .+.|.+.. .+.+..+-+..|+. +||||||++.+. ..
T Consensus 27 ~~CgGtLI~~~-~VLTAAHC~~~--~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~~~~~~~ 103 (227)
T 1iau_A 27 KRCGGFLIRDD-FVLTAAHCWGS--SINVTLGAHNIKEQEPTQQFIPVKRPIPHPAYNPKNFSNDIMLLQLERKAKRTRA 103 (227)
T ss_dssp EEEEEEEEETT-EEEECGGGCCS--EEEEEESCSBTTSCCTTCEEEEEEEEEECTTCCTTTCTTCCEEEEESSCCCCBTT
T ss_pred eEEEEEEEcCC-EEEECHHhCCC--ceEEEEccccccCCCCccEEEEEEEEECCCCCCCCCCCCCeEEEEECCcccCCCc
Confidence 47999999987 99999999975 45555532 34456666666653 599999998754 23
Q ss_pred CcceecCCCC-CCCCCcEEEEeeCCCCCC-----CceEEeEEeeeeeeecc--CCCCCCcccEEEEc-----ccCCCCCC
Q 013014 213 LRPIPIGVSA-DLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISS--AATGRPIQDVIQTD-----AAINPGNS 279 (451)
Q Consensus 213 ~~~l~l~~s~-~~~~G~~V~~iG~p~g~~-----~~~~~G~Vs~~~~~~~~--~~~~~~~~~~i~~d-----~~i~~G~S 279 (451)
..|+.|.... .+..|+.+++.||..... .......+.-+...... +........++... ...+.|+|
T Consensus 104 v~picLp~~~~~~~~g~~~~v~GwG~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDS 183 (227)
T 1iau_A 104 VQPLRLPSNKAQVKPGQTCSVAGWGQTAPLGKHSHTLQEVKMTVQEDRKCESDLRHYYDSTIELCVGDPEIKKTSFKGDS 183 (227)
T ss_dssp BCCCCCCCTTCCCCTTCEEEEEESSCSSSSSCCCSBCEEEEEEBCCHHHHHHHTTTTCCTTTEEEESCTTSCCBCCTTCT
T ss_pred eecccCCCCCCCCCCCCEEEEEEcccCCCCCCcCceeeEeeeeeechHHhhhHhccccCCCcEEEeECCCCCCeeeecCC
Confidence 5677775433 357899999999874322 12333333322221111 10000111244432 35788999
Q ss_pred CCceeCCCceEEEEEeeeeCCCCCccceeEEEeccCchhhHHHhhh
Q 013014 280 GGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (451)
Q Consensus 280 GGPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (451)
||||+. +|.++||+++. ++.....+....+....+|+++.++
T Consensus 184 GgPL~~-~~~l~Gi~S~g---c~~~~~p~vyt~v~~~~~WI~~~~~ 225 (227)
T 1iau_A 184 GGPLVC-NKVAQGIVSYG---RNNGMPPRACTKVSSFVHWIKKTMK 225 (227)
T ss_dssp TSEEEE-TTEEEEEEEEE---CTTSCSCEEEEEGGGGHHHHHHHHH
T ss_pred CchheE-eeEEEEEEeEe---cCCCCCCeEEEEHHHHHHHHHHHHh
Confidence 999996 67999999987 2222235667788888888887654
No 67
>2zgc_A Granzyme M; serine protease, cytolysis, glycoprotein, hydrolase, secrete zymogen; 1.96A {Homo sapiens} PDB: 2zgh_A 2zks_A 2zgj_A
Probab=99.40 E-value=4.1e-11 Score=113.70 Aligned_cols=175 Identities=17% Similarity=0.200 Sum_probs=111.2
Q ss_pred CeEEEEEEEcCCCeEEecccccCCCC-cEEEEeCC------CcEEEEEEEEEcC--------CCCEEEEEEcCCC---CC
Q 013014 151 QGSGSGFVWDSKGHVVTNYHVIRGAS-DIRVTFAD------QSAYDAKIVGFDQ--------DKDVAVLRIDAPK---DK 212 (451)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHVv~~~~-~i~V~~~d------g~~~~a~vv~~d~--------~~DlAlLkv~~~~---~~ 212 (451)
...|+|.+|+++ +|||+|||+.+.. .+.|.+.. ++.+..+-+..|+ .+||||||++.+. ..
T Consensus 23 ~~~CgGtLIs~~-~VLTAAHC~~~~~~~~~v~~G~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~DIALl~L~~~v~~~~~ 101 (240)
T 2zgc_A 23 SHLCGGVLVHPK-WVLTAAHCLAQRMAQLRLVLGLHTLDSPGLTFHIKAAIQHPRYKPVPALENDLALLQLDGKVKPSRT 101 (240)
T ss_dssp EEEEEEEEEETT-EEEECGGGGCSCGGGEEEEESCSBSSSCCEEEEEEEEEECTTCBCTTSCBSCCEEEEESSCCCCCSS
T ss_pred CeEEEEEEEcCC-EEEEcHHhcCCCCCCEEEEecccccCCCCeEEEEEEEEECCCCCCCCCCcccEEEEEeCCcccCCCc
Confidence 357999999987 9999999998653 57777642 3455555555543 3599999998754 23
Q ss_pred CcceecCCCC-CCCCCcEEEEeeCCCCCC-----CceEEeEEeeeeeeeccC--C-CCCCcccEEEE-----cccCCCCC
Q 013014 213 LRPIPIGVSA-DLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISSA--A-TGRPIQDVIQT-----DAAINPGN 278 (451)
Q Consensus 213 ~~~l~l~~s~-~~~~G~~V~~iG~p~g~~-----~~~~~G~Vs~~~~~~~~~--~-~~~~~~~~i~~-----d~~i~~G~ 278 (451)
..|+.|.... .+..|+.+++.||..... .......+.-+....+.. . .......++.. ....+.|+
T Consensus 102 v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GD 181 (240)
T 2zgc_A 102 IRPLALPSKRQVVAAGTRCSMAGWGLTHQGGRLSRVLRELDLQVLDTRMCNNSRFWNGSLSPSMVCLAADSKDQAPCKGD 181 (240)
T ss_dssp CCCCCCCCTTCCCCTTCEEEEEECCBSSTTCCBCSBCEEEEEEECCHHHHTSTTTTTTCCCTTEEEEECSSTTCBCCTTC
T ss_pred eeeeEcCCCCCCCCCCCEEEEEECCcccCCCCcCceeeeeeeeecCHHHhCCccccCCCCCCceEeeccCCCCCccCCCC
Confidence 5677775433 357899999999874321 122333333222222211 0 01111234443 23568999
Q ss_pred CCCceeCC-CceEEEEEeeeeCCCCCccceeEEEeccCchhhHHHhhhc
Q 013014 279 SGGPLLDS-SGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKF 326 (451)
Q Consensus 279 SGGPlvd~-~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~~ 326 (451)
|||||+.. +..++||+++....++.....+....+...++||++.++.
T Consensus 182 SGgPL~~~~~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~~~~ 230 (240)
T 2zgc_A 182 SGGPLVCGKGRVLAGVLSFSSRVCTDIFKPPVATAVAPYVSWIRKVTGR 230 (240)
T ss_dssp TTCEEEETTTTEEEEEECCCCSSTTCTTSCCEEEESGGGHHHHHHHHCC
T ss_pred ccCeeEECCCCEEEEEEEECCCCCCCCCCCcEEEEHHHhHHHHHHHHhh
Confidence 99999963 2389999998644444333456778888888999887653
No 68
>1gvk_B Elastase 1, peptide inhibitor; hydrolase, serine protease, catalytic intermediate, atomic resolution, hydrolase-hydrolase inhibitor complex; 0.94A {Sus scrofa} SCOP: b.47.1.2 PDB: 1bma_A* 1b0e_A* 1e34_B* 1e35_B* 1e36_B* 1e37_B* 1e38_B* 1eas_A* 1eat_A* 1eau_A* 1ela_A* 1elb_A* 1elc_A* 1eld_E* 1ele_E* 1elf_A* 1elg_A* 1esa_A 1esb_A* 1est_A* ...
Probab=99.40 E-value=9.3e-12 Score=117.96 Aligned_cols=173 Identities=16% Similarity=0.204 Sum_probs=110.7
Q ss_pred eEEEEEEEcCCCeEEecccccCCCCcEEEEeCC---------CcEEEEEEEEEcC---------CCCEEEEEEcCCC---
Q 013014 152 GSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD---------QSAYDAKIVGFDQ---------DKDVAVLRIDAPK--- 210 (451)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHVv~~~~~i~V~~~d---------g~~~~a~vv~~d~---------~~DlAlLkv~~~~--- 210 (451)
..|+|.+|+++ +|||+|||+.+...+.|.+.. .+.+..+-+..|+ .+||||||++.+.
T Consensus 28 ~~CgGsLI~~~-~VLTAAHC~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~DIALl~L~~~v~~~ 106 (240)
T 1gvk_B 28 HTCGGTLIRQN-WVMTAAHCVDRELTFRVVVGEHNLNQNNGTEQYVGVQKIVVHPYWNTDDVAAGYDIALLRLAQSVTLN 106 (240)
T ss_dssp EEEEEEEEETT-EEEECGGGGCSCCCEEEEESCSBTTSCCSCCEEEEEEEEEECTTCCTTCGGGCCCCEEEEESSCCCCB
T ss_pred ceEEEEEeeCC-EEEECHHHCCCCcceEEEECCeecccCCCcceEEEEEEEEECCCCCCCCCCCCCcEEEEEECCccccC
Confidence 47999999987 999999999987788887742 2345566566665 5699999998754
Q ss_pred CCCcceecCCCC-CCCCCcEEEEeeCCCCCC-----CceEEeEEeeeeeeeccCC--CC-CCcccEEEEc----ccCCCC
Q 013014 211 DKLRPIPIGVSA-DLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISSAA--TG-RPIQDVIQTD----AAINPG 277 (451)
Q Consensus 211 ~~~~~l~l~~s~-~~~~G~~V~~iG~p~g~~-----~~~~~G~Vs~~~~~~~~~~--~~-~~~~~~i~~d----~~i~~G 277 (451)
....|+.|.... .+..|+.+++.||..... .......+.-+........ .+ .....++... ...+.|
T Consensus 107 ~~v~pi~lp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~C~G 186 (240)
T 1gvk_B 107 SYVQLGVLPRAGTILANNSPCYITGWGLTRTNGQLAQTLQQAYLPTVDYAICSSSSYWGSTVKNSMVCAGGDGVRSGCQG 186 (240)
T ss_dssp TTBCCCCCCCTTCCCCTTCCEEEEESCBSSTTCCBCSBCEEEECCEECHHHHTSTTTTGGGCCTTEEEECCSSSCBCCTT
T ss_pred CCccceecCCCCCCCCCCCEEEEEecCcCCCCCCcchhccEEEEEEEcHHHhccccccCccCCcceEeecCCCCCcccCC
Confidence 235566665433 356899999999874321 1222222222222211110 00 0112344432 356899
Q ss_pred CCCCceeCC-Cc--eEEEEEeeeeC-CCCCccceeEEEeccCchhhHHHhhh
Q 013014 278 NSGGPLLDS-SG--SLIGINTAIYS-PSGASSGVGFSIPVDTVNGIVDQLVK 325 (451)
Q Consensus 278 ~SGGPlvd~-~G--~VVGI~s~~~~-~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (451)
+|||||+-. +| .++||+++... .++.....+....+....+|+++.++
T Consensus 187 DSGgPL~~~~~g~~~l~Gi~S~g~~~~C~~~~~p~vyt~V~~~~~WI~~~i~ 238 (240)
T 1gvk_B 187 DSGGPLHCLVNGQYAVHGVTSFVSRLGCNVTRKPTVFTRVSAYISWINNVIA 238 (240)
T ss_dssp CTTCEEEEEETTEEEEEEEEEECBTTBSSCTTCCEEEEEGGGSHHHHHHHHH
T ss_pred CCcCceEEEECCcEEEEEEEEEeCCCCCCCCCCCcEEEeHHHHHHHHHHHHh
Confidence 999999853 56 89999998642 34333345667788888888887654
No 69
>1si5_H Scatter factor, hepatocyte growth factor, SF, hepatopoeitin A, LUNG; chymotrypsin homology, hormone/growth factor complex; 2.53A {Homo sapiens} SCOP: b.47.1.2 PDB: 1shy_A
Probab=99.39 E-value=9.2e-11 Score=111.06 Aligned_cols=174 Identities=12% Similarity=0.136 Sum_probs=110.6
Q ss_pred CeEEEEEEEcCCCeEEecccccCCC--CcEEEEeCC-----------CcEEEEEEEEEcC-CCCEEEEEEcCCC---CCC
Q 013014 151 QGSGSGFVWDSKGHVVTNYHVIRGA--SDIRVTFAD-----------QSAYDAKIVGFDQ-DKDVAVLRIDAPK---DKL 213 (451)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHVv~~~--~~i~V~~~d-----------g~~~~a~vv~~d~-~~DlAlLkv~~~~---~~~ 213 (451)
...|+|.+|+++ +|||+|||+.+. ..+.|.+.. .+.+..+-+.+++ .+|||||+++.+. ...
T Consensus 22 ~~~CgGtLIs~~-~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~~v~~~~~~p~~~DiALl~L~~~v~~~~~v 100 (240)
T 1si5_H 22 KHICGGSLIKES-WVLTARQCFPSRDLKDYEAWLGIHDVHGRGDEKCKQVLNVSQLVYGPEGSDLVLMKLARPAVLDDFV 100 (240)
T ss_dssp SEEEEEEEEETT-EEEEEGGGCSSSCGGGEEEEESCSBSSCSTTTTTCEEEEEEEEEECSSTTCEEEEEESSCCCCSSSC
T ss_pred CeEEEEEEeeCC-EEEEhHHhcCCCCCccEEEEEeeeecCCCCCCCcceEEEEEEEEcCCCCCcEEEEEECCccccCCce
Confidence 457999999987 999999999764 467777632 2334554444565 6899999998754 235
Q ss_pred cceecCCC-CCCCCCcEEEEeeCCCCCC----CceEEeEEeeeeeeeccCCCC-C--CcccEEEE-----cccCCCCCCC
Q 013014 214 RPIPIGVS-ADLLVGQKVYAIGNPFGLD----HTLTTGVISGLRREISSAATG-R--PIQDVIQT-----DAAINPGNSG 280 (451)
Q Consensus 214 ~~l~l~~s-~~~~~G~~V~~iG~p~g~~----~~~~~G~Vs~~~~~~~~~~~~-~--~~~~~i~~-----d~~i~~G~SG 280 (451)
.|+.|... ..+..|+.+.++||..... .......+.-+....+..... . ....++.. ....+.|+||
T Consensus 101 ~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSG 180 (240)
T 1si5_H 101 STIDLPNYGSTIPEKTSCSVYGWGYTGLINYDGLLRVAHLYIMGNEKCSQHHRGKVTLNESEICAGAEKIGSGPCEGDYG 180 (240)
T ss_dssp CCCBCCCTTCCCCTTCEEEEEESSCCCCSSCCCBCEEEEEEEECGGGTCC-------CCTTEEEEECSSSCCBCCTTCTT
T ss_pred eccCcCCcCCCCCCCCEEEEEEeCCCCCCCCCCeeEEEEEeecCHHHhhhhhcCCccCCCCEEeecCCCCCCEeccCCCC
Confidence 67777543 3466899999999875432 223333333332222211100 0 11233333 2457889999
Q ss_pred CceeCCCc---eEEEEEeeeeCCCCCccceeEEEeccCchhhHHHhhhc
Q 013014 281 GPLLDSSG---SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKF 326 (451)
Q Consensus 281 GPlvd~~G---~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~~ 326 (451)
|||+..++ .++||+++.. .++.....+....+...++||++.++.
T Consensus 181 gPL~~~~~~~~~l~Gi~S~g~-~C~~~~~p~vyt~V~~y~~WI~~~i~~ 228 (240)
T 1si5_H 181 GPLVCEQHKMRMVLGVIVPGR-GCAIPNRPGIFVRVAYYAKWIHKIILT 228 (240)
T ss_dssp CEEEEECSSSEEEEEEECSCS-CSSCTTCCEEEEEGGGGHHHHHHHHSS
T ss_pred CcEEEEECCcEEEEEEEEECC-CCCCCCCCcEEEEHHHHHHHHHHHHhc
Confidence 99996433 7999999764 233333456778888889999887653
No 70
>3i18_A LMO2051 protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.70A {Listeria monocytogenes} PDB: 2kjk_A 3i1e_A
Probab=99.39 E-value=1.6e-12 Score=106.81 Aligned_cols=83 Identities=20% Similarity=0.318 Sum_probs=71.8
Q ss_pred cceEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEcCCHHHHHHHHhcCCCCCEEEEEEEECCeEEEEEEEe
Q 013014 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDELLLQGIKQPPVLSDNLRL 429 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i~~~~dl~~~l~~~~~g~~v~l~v~R~g~~~~~~v~l 429 (451)
.|++|.++.++|||++ ||++ ||+|++|||++|.++.|+.+++...++|++++++|.|+|+..++++++
T Consensus 7 ~Gv~V~~V~~~spA~~-GL~~-----------GD~I~~Ing~~v~~~~dl~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~ 74 (100)
T 3i18_A 7 DGVYVMSVKDDVPAAD-VLHA-----------GDLITEIDGNAFKSSQEFIDYIHSKKVGDTVKINYKHGDKNEQADIKL 74 (100)
T ss_dssp CCEEEEEECTTSGGGG-TCCT-----------TCEEEEETTBCCSSHHHHHHHHHTSCTTCEEEEEEEETTEEEEEEEEC
T ss_pred CCEEEEEeCCCCchHH-CCCC-----------CCEEEEECCEECCCHHHHHHHHHhCCCCCEEEEEEEECCEEEEEEEEE
Confidence 7999999999999996 9999 999999999999999999999998778999999999999999999998
Q ss_pred eecCCCcccceeecccC
Q 013014 430 LWSEERPVRQMLCGYVS 446 (451)
Q Consensus 430 ~~~~~~~~~~~~~~~~~ 446 (451)
...++. .+...|+..
T Consensus 75 ~~~~~~--~~~~iGi~~ 89 (100)
T 3i18_A 75 TAIDKK--GTPGIGITL 89 (100)
T ss_dssp EECSTT--CCEECSEEE
T ss_pred ecCCCC--CCcEEeEEE
Confidence 766532 233445443
No 71
>1spj_A Kallikrein 1; serine protease, KLK1, HK1, hydrolase; HET: NAG; 1.70A {Homo sapiens}
Probab=99.39 E-value=2.2e-11 Score=115.04 Aligned_cols=169 Identities=18% Similarity=0.219 Sum_probs=107.4
Q ss_pred eEEEEEEEcCCCeEEecccccCCCCcEEEEeCC---------CcEEEEEEEEEcCC------------------CCEEEE
Q 013014 152 GSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD---------QSAYDAKIVGFDQD------------------KDVAVL 204 (451)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHVv~~~~~i~V~~~d---------g~~~~a~vv~~d~~------------------~DlAlL 204 (451)
..|+|.+|+++ +|||+|||+.+ .+.|.+.. ++.+..+-+..|++ +|||||
T Consensus 24 ~~CgGsLIs~~-~VLTAAHC~~~--~~~v~~G~~~~~~~~~~~~~~~v~~~~~hp~y~~~~~~~~~~~~~~~~~~DIALl 100 (238)
T 1spj_A 24 FQCGGILVHRQ-WVLTAAHCISD--NYQLWLGRHNLFDDENTAQFVHVSESFPHPGFNMSLLENHTRQADEDYSHDLMLL 100 (238)
T ss_dssp EEEEEEEEETT-EEEECGGGCCS--SEEEEESCSBTTSCCTTCEEECEEEEEECTTSCGGGGCC--CTTTCCCTTCCEEE
T ss_pred eeEEEEEecCC-EEEEcHHhCCC--CceEEEEeccccCCCCCceEEEEEEEEcCCCccccccccccccccccCCCCeEEE
Confidence 57999999986 99999999975 34554421 23455555555543 499999
Q ss_pred EEcCCCC----CCcceecCCCCCCCCCcEEEEeeCCCCCC------CceEEeEEeeeeeeeccCC-CCCCcccEEEE---
Q 013014 205 RIDAPKD----KLRPIPIGVSADLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISSAA-TGRPIQDVIQT--- 270 (451)
Q Consensus 205 kv~~~~~----~~~~l~l~~s~~~~~G~~V~~iG~p~g~~------~~~~~G~Vs~~~~~~~~~~-~~~~~~~~i~~--- 270 (451)
+++.+.. ...|+.|... ....|+.++++||..... .......+.-+........ .......++..
T Consensus 101 ~L~~~~~~~~~~v~pi~L~~~-~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~ 179 (238)
T 1spj_A 101 RLTEPADTITDAVKVVELPTE-EPEVGSTCLASGWGSIEPENFSFPDDLQCVDLKILPNDECKKAHVQKVTDFMLCVGHL 179 (238)
T ss_dssp EESSCCCCSSTTCCCCCCCSS-CCCTTCEEEEEESSCSSSSSCCCCSBCEEEEEEEECHHHHHHHCSSCCCTTEEEEECT
T ss_pred EECccccccCCceeeccCCCC-CCCCCCEEEEEecCCCCCCCCCCcCcccEEEEeecCHHHhhhhccCCCCCCeEEeeCC
Confidence 9987542 3567777543 456799999999874321 1233333332222211100 00111234433
Q ss_pred --cccCCCCCCCCceeCCCceEEEEEeeeeCCCCCccceeEEEeccCchhhHHHhhh
Q 013014 271 --DAAINPGNSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (451)
Q Consensus 271 --d~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (451)
....+.|+|||||+. ++.++||++++...++.....+....+...++|+++.++
T Consensus 180 ~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~i~ 235 (238)
T 1spj_A 180 EGGKDTCVGDSGGPLMC-DGVLQGVTSWGYVPCGTPNKPSVAVRVLSYVKWIEDTIA 235 (238)
T ss_dssp TCSSBCCTTCTTCEEEE-TTEEEEEEEECCSSTTCTTCCEEEEEGGGGHHHHHHHHH
T ss_pred CCCCCCCCCCCCCcEEE-cCEEEEEEEeCCCCCCCCCCCeEEEEHHHhHHHHHHHhh
Confidence 245789999999995 689999999874445443445677888888888887664
No 72
>1orf_A Granzyme A; hydrolase-hydrolase inhibitor complex; HET: 0G6; 2.40A {Homo sapiens} SCOP: b.47.1.2 PDB: 1op8_A
Probab=99.38 E-value=5.1e-11 Score=112.40 Aligned_cols=172 Identities=16% Similarity=0.150 Sum_probs=108.1
Q ss_pred CeEEEEEEEcCCCeEEecccccCCCCcEEEEeCC---------CcEEEEEEEEEcC-------CCCEEEEEEcCCC---C
Q 013014 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD---------QSAYDAKIVGFDQ-------DKDVAVLRIDAPK---D 211 (451)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHVv~~~~~i~V~~~d---------g~~~~a~vv~~d~-------~~DlAlLkv~~~~---~ 211 (451)
...|+|.+|+++ +|||+|||+.+ ..+.|.+.. .+.+..+-+..|+ .+||||||++.+. .
T Consensus 23 ~~~CgGtLIs~~-~VLTAAHC~~~-~~~~v~~G~~~~~~~~~~~~~~~v~~~~~Hp~y~~~~~~~DIALl~L~~~~~~~~ 100 (234)
T 1orf_A 23 KTICAGALIAKD-WVLTAAHCNLN-KRSQVILGAHSITREEPTKQIMLVKKEFPYPCYDPATREGDLKLLQLTEKAKINK 100 (234)
T ss_dssp SCEEEEEEEETT-EEEECTTCCCC-TTCEEEESCSBSSSCCTTCEEECEEEEEECTTCCTTTCTTCCEEEEESSCCCCSS
T ss_pred ceEEEEEEeeCC-EEEEchhcCCC-CCceEEEeccccCcCCCceEEEEEEEEEcCCCCCCCCCCCCEEEEEECCcCccCC
Confidence 457999999987 99999999975 345565532 2445566666665 3599999998754 2
Q ss_pred CCcceecCCCC-CCCCCcEEEEeeCCCCCC-----CceEEeEEeeeeeeecc--CCCCCC---cccEEEE-----cccCC
Q 013014 212 KLRPIPIGVSA-DLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISS--AATGRP---IQDVIQT-----DAAIN 275 (451)
Q Consensus 212 ~~~~l~l~~s~-~~~~G~~V~~iG~p~g~~-----~~~~~G~Vs~~~~~~~~--~~~~~~---~~~~i~~-----d~~i~ 275 (451)
...|+.|.... .+..|+.+.+.||..... .......+.-+...... ...... ...++.. ....+
T Consensus 101 ~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C 180 (234)
T 1orf_A 101 YVTILHLPKKGDDVKPGTMCQVAGWGRTHNSASWSDTLREVEITIIDRKVCNDRNHYNFNPVIGMNMVCAGSLRGGRDSC 180 (234)
T ss_dssp SSCCCCCCSSCCCCCTTCEEEEEESSCSSSSSCCCSBCEEEEEEEECHHHHTSTTTTTTTTCCCTTEEEEECSSCCCBCC
T ss_pred CeeeeecCCCcCCCCCCCEEEEEECCcCCCCCCccccceEeEEEeeCHHHcCCccccccCCccCCCEEEecCCCCCCcCC
Confidence 35677775433 357899999999864321 22333334333332222 000000 0134443 23578
Q ss_pred CCCCCCceeCCCceEEEEEeeee-CCCCCccceeEEEecc-CchhhHHHhhh
Q 013014 276 PGNSGGPLLDSSGSLIGINTAIY-SPSGASSGVGFSIPVD-TVNGIVDQLVK 325 (451)
Q Consensus 276 ~G~SGGPlvd~~G~VVGI~s~~~-~~~~~~~~~~~aIP~~-~i~~~l~~l~~ 325 (451)
.|+|||||+. +|.++||+++.. ..++.....+....+. ...+|+++.++
T Consensus 181 ~GDSGgPL~~-~~~l~GI~S~g~~~~C~~~~~p~vyt~v~~~~~~WI~~~~~ 231 (234)
T 1orf_A 181 NGDSGSPLLC-EGVFRGVTSFGLENKCGDPRGPGVYILLSKKHLNWIIMTIK 231 (234)
T ss_dssp TTCTTCEEEE-TTEEEEEEEECCTTCTTCTTSCEEEEECCHHHHHHHHHHHC
T ss_pred CCCCCCeEEE-CCEEEEEEEEcCCCCCCCCCCCCEEEEchHHHHHHHHHHHH
Confidence 8999999996 689999999875 2344333456667777 67777776543
No 73
>4i8h_A Cationic trypsin, beta-trypsin; serine protease, hydrolase; HET: BEN; 0.75A {Bos taurus} PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A 1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A* 1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A ...
Probab=99.38 E-value=2.4e-11 Score=113.53 Aligned_cols=171 Identities=17% Similarity=0.188 Sum_probs=108.4
Q ss_pred CeEEEEEEEcCCCeEEecccccCCCCcEEEEeC-------CCcEEEEEEEEEcCC-------CCEEEEEEcCCC---CCC
Q 013014 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFA-------DQSAYDAKIVGFDQD-------KDVAVLRIDAPK---DKL 213 (451)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHVv~~~~~i~V~~~-------dg~~~~a~vv~~d~~-------~DlAlLkv~~~~---~~~ 213 (451)
...|+|.+|+++ +|||+|||+.....+.+-.. +.+.+..+-+..|+. +|||||+++.+. ...
T Consensus 22 ~~~C~GtLI~~~-~VLTAAhC~~~~~~v~~g~~~~~~~~~~~~~~~v~~~~~hp~y~~~~~~~DIAll~L~~~~~~~~~v 100 (223)
T 4i8h_A 22 YHFCGGSLINSQ-WVVSAAHCYKSGIQVRLGEDNINVVEGNEQFISASKSIVHPSYNSNTLNNDIMLIKLKSAASLNSRV 100 (223)
T ss_dssp SEEEEEEECSSS-EEEECGGGCCSSCEEEESCSSTTSCCSCCEEEEEEEEEECTTCCTTTCTTCCEEEEESSCCCCBTTB
T ss_pred CcEEEEEEEcCC-EEEecHHhCCCCcEEEEccccccccCCCcEEEEEeEEEECcCCCCCCCcCCEEEEEECCcCcCCCce
Confidence 357999999986 99999999985433333211 223456666666663 599999998754 246
Q ss_pred cceecCCCCCCCCCcEEEEeeCCCCCC------CceEEeEEeeeeeeeccCC-CCCCcccEEEE-----cccCCCCCCCC
Q 013014 214 RPIPIGVSADLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISSAA-TGRPIQDVIQT-----DAAINPGNSGG 281 (451)
Q Consensus 214 ~~l~l~~s~~~~~G~~V~~iG~p~g~~------~~~~~G~Vs~~~~~~~~~~-~~~~~~~~i~~-----d~~i~~G~SGG 281 (451)
.|+.|... ....|+.+++.||..... .......+.-+........ .......++.. ....+.|+|||
T Consensus 101 ~pi~l~~~-~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGg 179 (223)
T 4i8h_A 101 ASISLPTS-CASAGTQCLISGWGNTKSSGTSYPDVLKCLKAPILSDSSCKSAYPGQITSNMFCAGYLEGGKDSCQGDSGG 179 (223)
T ss_dssp CCCBCCSS-CCCTTCEEEEEESSCCCSSSCCCCSSCEEEEEEBCCHHHHHHHSTTTCCTTEEEESCTTSSCBCCTTCTTC
T ss_pred eceECCCC-CCCCCCEEEEEecccccCCCCCccccceEEEeeecCHHHHHHhhCCCCCCCeEeccCCCCCCccCCCCCCC
Confidence 67777544 367899999999874332 1223333332222111100 01112334433 24568899999
Q ss_pred ceeCCCceEEEEEeeeeCCCCCccceeEEEeccCchhhHHHhhh
Q 013014 282 PLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (451)
Q Consensus 282 Plvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (451)
||+. +++++||+++... ++.....+....+...++||++.++
T Consensus 180 Pl~~-~~~l~Gi~S~g~~-c~~~~~p~vyt~v~~~~~WI~~~i~ 221 (223)
T 4i8h_A 180 PVVC-SGKLQGIVSWGSG-CAQKNKPGVYTKVCNYVSWIKQTIA 221 (223)
T ss_dssp EEEE-TTEEEEEEEECSS-SSCTTCCEEEEEGGGGHHHHHHHHH
T ss_pred cEEE-CCEEEEEEEcCCC-CCCCCCCeEEEEHHHHHHHHHHHHh
Confidence 9996 6799999998643 3333345677888888888887664
No 74
>3gov_B MAsp-1; complement, serine protease, beta barrel, hydrolase, hydroxy immune response, innate immunity, sushi, coagulation, compl pathway; 2.55A {Homo sapiens} SCOP: b.47.1.0 PDB: 4djz_B
Probab=99.38 E-value=5.9e-11 Score=112.53 Aligned_cols=172 Identities=19% Similarity=0.218 Sum_probs=110.1
Q ss_pred CeEEEEEEEcCCCeEEecccccCC----------------CCcEEEEeCC---------CcEEEEEEEEEcCC-------
Q 013014 151 QGSGSGFVWDSKGHVVTNYHVIRG----------------ASDIRVTFAD---------QSAYDAKIVGFDQD------- 198 (451)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHVv~~----------------~~~i~V~~~d---------g~~~~a~vv~~d~~------- 198 (451)
...|+|.+|+++ +|||+|||+.+ ...+.|.+.. ++.+..+-+..|+.
T Consensus 24 ~~~CgGtLIs~~-~VLTAAHC~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~ 102 (251)
T 3gov_B 24 QPFCGGSLLGSS-WIVTAAHCLHQSLDPKDPTLRDSDLLSPSDFKIILGKHWRLRSDENEQHLGVKHTTLHPQYDPNTFE 102 (251)
T ss_dssp CEEEEEEEETTT-EEEECGGGGBCCCCTTSCCCCGGGBCCGGGEEEEESCCBSSSCCSSCEEECEEEEEECTTCBTTTTB
T ss_pred CeeEEEEEecCC-EEEECHhhccccccccccccccccccccccEEEEecceeccCCCCcceEeeeEEEEECCCCCCCCCC
Confidence 457999999987 99999999954 3467777642 34455666667765
Q ss_pred CCEEEEEEcCCC---CCCcceecCCCCCCCCCcEEEEeeCCCCCC----CceEEeEEeeeeeeecc--CCC--CCCcccE
Q 013014 199 KDVAVLRIDAPK---DKLRPIPIGVSADLLVGQKVYAIGNPFGLD----HTLTTGVISGLRREISS--AAT--GRPIQDV 267 (451)
Q Consensus 199 ~DlAlLkv~~~~---~~~~~l~l~~s~~~~~G~~V~~iG~p~g~~----~~~~~G~Vs~~~~~~~~--~~~--~~~~~~~ 267 (451)
+|||||+++.+. ....|+.|... ....|+.+.+.||..... .......+.-+....+. +.. ......+
T Consensus 103 ~DIAll~L~~~~~~~~~v~picLp~~-~~~~~~~~~v~GwG~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~ 181 (251)
T 3gov_B 103 NDVALVELLESPVLNAFVMPICLPEG-PQQEGAMVIVSGWGKQFLQRFPETLMEIEIPIVDHSTCQKAYAPLKKKVTRDM 181 (251)
T ss_dssp TCCEEEEESSCCCCSSSCCCCBCCSS-CCCTTCEEEEEECSCCTTSCCCSBCEEEEEEEECHHHHHHHTTTTTCCCCTTE
T ss_pred CCEEEEEeCCcccCCCceEEeECCCC-CCCCCCEEEEEcCCCCCCCCCCccceEEeeEEECHHHhhhhhhhccCCCCCCc
Confidence 599999998653 23567777544 347899999999875322 12233333222221111 100 0111234
Q ss_pred EEE-----cccCCCCCCCCceeCC---Cc--eEEEEEeeeeCCCCCccceeEEEeccCchhhHHHhhh
Q 013014 268 IQT-----DAAINPGNSGGPLLDS---SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (451)
Q Consensus 268 i~~-----d~~i~~G~SGGPlvd~---~G--~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (451)
+.. ....+.|+|||||+.. +| .++||+++.. .++.....+....+...++||++.++
T Consensus 182 ~Ca~~~~~~~~~C~GDsGgPl~~~~~~~~~~~l~Gi~S~g~-~C~~~~~p~vyt~V~~~~~WI~~~~~ 248 (251)
T 3gov_B 182 ICAGEKEGGKDACAGDSGGPMVTLNRERGQWYLVGTVSWGD-DCGKKDRYGVYSYIHHNKDWIQRVTG 248 (251)
T ss_dssp EEESCTTCCCBCCTTCTTCEEEEECTTTCCEEEEEEEEECS-SSSCSSCCEEEEETTTTHHHHHHHHC
T ss_pred EEecCCCCCCccCCCCCCCeEEeeeCCCCcEEEEEEEEECC-CCCCCCCCEEEEEHHHhHHHHHHHhc
Confidence 443 2457899999999853 34 6999999873 34433445777888888999987653
No 75
>1sgf_A 7S NGF, nerve growth factor; growth factor (beta-NGF), hydrolase - serine proteinase (GAM inactive serine proteinase (alpha-NGF); HET: NAG NDG; 3.15A {Mus musculus} SCOP: b.47.1.2
Probab=99.37 E-value=1.1e-11 Score=117.48 Aligned_cols=170 Identities=18% Similarity=0.211 Sum_probs=102.0
Q ss_pred CeEEEEEEEcCCCeEEecccccCCCCcEEEEeC---------CCcEEEEEEEEEcC------------------CCCEEE
Q 013014 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFA---------DQSAYDAKIVGFDQ------------------DKDVAV 203 (451)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHVv~~~~~i~V~~~---------dg~~~~a~vv~~d~------------------~~DlAl 203 (451)
...|+|.+|+++ +|||+|||+.+. +.|.+. .++.+..+-+..|+ .+||||
T Consensus 26 ~~~CgGsLIs~~-~VLTAAHC~~~~--~~v~~G~~~~~~~~~~~~~~~v~~~~~Hp~y~~~~~~~~~~~~~~~~~~DIAL 102 (240)
T 1sgf_A 26 KYQCGGVLLDRN-WVLTAAHCYNDK--YQVWLGKNNFLEDEPSDQHRLVSKAIPHPDFNMSLLNEHTPQPEDDYSNDLML 102 (240)
T ss_dssp SCCEEEEECSSS-EEEECGGGCCSC--CEEEECC----C-CTTCEEEEEEEEEECTTSCGGGC----CCTTCBCTTCCEE
T ss_pred CeEEEEEEecCC-EEEECHHhCCCC--ceEEeCCcccccCCCCceEEEEEEEEcCCCCcccccccccccccCCCCCceEE
Confidence 347999999986 999999999854 334332 13344555455443 359999
Q ss_pred EEEcCCC---CCCcceecCCCCCCCCCcEEEEeeCCCCCCC------ceEEeEEeeeeeeeccCCCC-CCcccEEEEc--
Q 013014 204 LRIDAPK---DKLRPIPIGVSADLLVGQKVYAIGNPFGLDH------TLTTGVISGLRREISSAATG-RPIQDVIQTD-- 271 (451)
Q Consensus 204 Lkv~~~~---~~~~~l~l~~s~~~~~G~~V~~iG~p~g~~~------~~~~G~Vs~~~~~~~~~~~~-~~~~~~i~~d-- 271 (451)
|+++.+. ....|+.|... ....|+.+++.||...... ......+.-+.......... .....++...
T Consensus 103 l~L~~~~~~~~~v~picL~~~-~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~ 181 (240)
T 1sgf_A 103 LRLSKPADITDVVKPITLPTE-EPKLGSTCLASGWGSTTPIKFKYPDDLQCVNLKLLPNEDCDKAHEMKVTDAMLCAGEM 181 (240)
T ss_dssp EEESSCCCCCSSCCCCCCCCS-CCCTTCEEEEC-------C---------CEEEEEECTHHHHTTCSSBCCTTEEEEEEC
T ss_pred EEeCCcCcCCCcccccCCCCC-CCCCCCEEEEEecCCCCCCCCCCCccccEEeeeEeCHHHhhhhhCCCcCCCeEeEccC
Confidence 9998764 24667888644 4678999999998643211 11222222222111111000 1112334332
Q ss_pred ---ccCCCCCCCCceeCCCceEEEEEeeeeCCCCCccceeEEEeccCchhhHHHhhh
Q 013014 272 ---AAINPGNSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (451)
Q Consensus 272 ---~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (451)
...+.|+|||||+. +|.++||+++....++.....+....+...++||++.++
T Consensus 182 ~~~~~~C~GDSGgPL~~-~~~l~GI~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~~ 237 (240)
T 1sgf_A 182 DGGSYTCEHDSGGPLIC-DGILQGITSWGPEPCGEPTEPSVYTKLIKFSSWIRETMA 237 (240)
T ss_dssp SSSEEECCCCTTCEEEE-TTEEEEEECCCCSSCCCSSCCEEEEESGGGHHHHHHHHH
T ss_pred CCCCCCCCCCCcCcEEE-ccEEEEEEEECCCCCCCCCCCeEEEeHHHHHHHHHHHHh
Confidence 24689999999996 789999999874445443445677888888999988765
No 76
>2asu_B Hepatocyte growth factor-like protein; serine proteinase, beta-chain, MSP, HGFL, hydrolase; 1.85A {Homo sapiens}
Probab=99.37 E-value=4.4e-11 Score=112.90 Aligned_cols=174 Identities=13% Similarity=0.118 Sum_probs=109.0
Q ss_pred CeEEEEEEEcCCCeEEecccccCC----CCcEEEEeCC-----------CcEEEEEEEEEcC-CCCEEEEEEcCCC---C
Q 013014 151 QGSGSGFVWDSKGHVVTNYHVIRG----ASDIRVTFAD-----------QSAYDAKIVGFDQ-DKDVAVLRIDAPK---D 211 (451)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHVv~~----~~~i~V~~~d-----------g~~~~a~vv~~d~-~~DlAlLkv~~~~---~ 211 (451)
...|+|.+|+++ +|||+|||+.+ ...+.|.+.. .+.+...-+..++ .+|||||+++.+. .
T Consensus 21 ~~~CgGtLI~~~-~VLTAAHC~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~~v~~i~~hp~~~DiALl~L~~~v~~~~ 99 (234)
T 2asu_B 21 QHFCGGSLVKEQ-WILTARQCFSSCHMPLTGYEVWLGTLFQNPQHGEPSLQRVPVAKMVCGPSGSQLVLLKLERSVTLNQ 99 (234)
T ss_dssp CEEEEEEEEETT-EEEEEGGGSSCTTCCCTTCEEEESCSBSSCCTTCTTCEEEEEEEEEECSTTCCEEEEEESSCCCCSS
T ss_pred CEEEEEEEEeCC-EEEECHHHcCCCCCCcccEEEEEeeeeccCCCCCCceEEEEEEEEecCCCCCCeEEEEeCCcCcCCC
Confidence 457999999987 99999999964 3456676532 2345555555665 4799999998764 2
Q ss_pred CCcceecCCCC-CCCCCcEEEEeeCCCCCC----CceEEeEEeeeeeeeccCC-CCCCcccEEEE-----cccCCCCCCC
Q 013014 212 KLRPIPIGVSA-DLLVGQKVYAIGNPFGLD----HTLTTGVISGLRREISSAA-TGRPIQDVIQT-----DAAINPGNSG 280 (451)
Q Consensus 212 ~~~~l~l~~s~-~~~~G~~V~~iG~p~g~~----~~~~~G~Vs~~~~~~~~~~-~~~~~~~~i~~-----d~~i~~G~SG 280 (451)
...|+.|.... .+..|+.++++||..... .......+.-+........ .......++.. ....+.|+||
T Consensus 100 ~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSG 179 (234)
T 2asu_B 100 RVALICLPPEWYVVPPGTKCEIAGWGETKGTGNDTVLNVALLNVISNQECNIKHRGRVRESEMCTEGLLAPVGACEGDYG 179 (234)
T ss_dssp SSCCCBCCCTTCCCCTTCEEEEEESSCCTTSSCTTBCEEEEEEEECHHHHHHHTTTCCCTTEEEECCCSSCCBCCTTCTT
T ss_pred cEeccCCCCccccCCCCCEEEEEeCCccCCCCCCccceEEEeeEEcHHHcccccCCccCcceEeecCCCCCCeeccCCCC
Confidence 35677775433 356899999999874432 2233333332222211100 01111234433 2357889999
Q ss_pred CceeCCC-c--eEEEEEeeeeCCCCCccceeEEEeccCchhhHHHhhhc
Q 013014 281 GPLLDSS-G--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKF 326 (451)
Q Consensus 281 GPlvd~~-G--~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~~ 326 (451)
|||+..+ | .++||+++.. .++.....+....+....+|+++.++.
T Consensus 180 gPL~~~~~~~~~l~Gi~S~g~-~C~~~~~p~vyt~V~~~~~WI~~~~~~ 227 (234)
T 2asu_B 180 GPLACFTHNSWVLEGIIIPNR-VCARSRWPAVFTRVSVFVDWIHKVMRL 227 (234)
T ss_dssp CEEEEEETTEEEEEEEECCCS-SSSCTTCCEEEEEGGGSHHHHHHHC--
T ss_pred CceEEEECCeEEEEEEEEcCC-CCCCCCCCeEEEEHHHHHHHHHHHhhc
Confidence 9998643 3 7999999764 233333456778888888888876543
No 77
>1m9u_A Earthworm fibrinolytic enzyme; hydrolase, serine protease (elastase-like); 2.30A {Eisenia fetida} SCOP: b.47.1.2
Probab=99.36 E-value=2.7e-11 Score=114.71 Aligned_cols=170 Identities=15% Similarity=0.197 Sum_probs=107.3
Q ss_pred eEEEEEEEcCCCeEEecccccCC--CCcEEEEeC--------CCcEEEEEEEEEcCCC---------CEEEEEEcCCC--
Q 013014 152 GSGSGFVWDSKGHVVTNYHVIRG--ASDIRVTFA--------DQSAYDAKIVGFDQDK---------DVAVLRIDAPK-- 210 (451)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHVv~~--~~~i~V~~~--------dg~~~~a~vv~~d~~~---------DlAlLkv~~~~-- 210 (451)
..|+|.+|+++ +|||+|||+.+ ...+.|.+. +++.+..+-+..|+.+ |||||+++.+.
T Consensus 27 ~~CgGtLIs~~-~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~~DIALl~L~~~v~~ 105 (241)
T 1m9u_A 27 HSCGASLLSST-SALSASHCVDGVLPNNIRVIAGLWQQSDTSGTQTANVDSYTMHENYGAGTASYSNDIAILHLATSISL 105 (241)
T ss_dssp EEEEEEECSSS-EEEECHHHHTTCCGGGEEEEESCSBTTCCTTCEEEEEEEEEECTTTTCSSSTTTTCCEEEEESSCCCC
T ss_pred eeeEEEEEeCC-EEEecHHhCCCCCcceEEEEEEeecCCCCCCceEEEEEEEEeCCCcCCCCCcccccEEEEEecCcccc
Confidence 57999999986 99999999986 456777763 2345666766776654 99999998764
Q ss_pred -CCCcceecCCC-CCCCCCcEEEEeeCCCCCC-----CceEEeEEeeeeeeecc--CCC-CC--CcccEEEEc-----cc
Q 013014 211 -DKLRPIPIGVS-ADLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISS--AAT-GR--PIQDVIQTD-----AA 273 (451)
Q Consensus 211 -~~~~~l~l~~s-~~~~~G~~V~~iG~p~g~~-----~~~~~G~Vs~~~~~~~~--~~~-~~--~~~~~i~~d-----~~ 273 (451)
....|+.|... .....|+.+++.||..... .......+.-+....+. +.. .. ....++... ..
T Consensus 106 ~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~Ca~~~~~~~~ 185 (241)
T 1m9u_A 106 GGNIQAAVLPANNNNDYAGTTCVISGWGRTDGTNNLPDILQKSSIPVITTAQCTAAMVGVGGANIWDNHICVQDPAGNTG 185 (241)
T ss_dssp CSSCCCCCCCSCSSCCCTTCEEEEEESSCSSSSSCCCSBCEEEEEEBCCHHHHHHHHTTSTTCCCCTTEEEECCTTSCCB
T ss_pred CCCccccCcCCCcCCCCCCCEEEEEeCcccCCCCCcccceeEeeEEEEcHHHhhhhhcccCCCcccCCcEEECcCCCCCe
Confidence 23567777644 2233799999999864432 22333333322221111 000 01 123344432 35
Q ss_pred CCCCCCCCceeCCCc--eEEEEEee--ee-CCCCCccceeEEEeccCchhhHHH
Q 013014 274 INPGNSGGPLLDSSG--SLIGINTA--IY-SPSGASSGVGFSIPVDTVNGIVDQ 322 (451)
Q Consensus 274 i~~G~SGGPlvd~~G--~VVGI~s~--~~-~~~~~~~~~~~aIP~~~i~~~l~~ 322 (451)
.+.|+|||||+..+| .++||+++ .. ..+......+....+....+|+++
T Consensus 186 ~C~GDSGgPL~~~~~~~~l~Gi~S~~~~~g~~C~~~~~p~vyt~V~~~~~WI~~ 239 (241)
T 1m9u_A 186 ACNGDSGGPLNCPDGGTRVVGVTSWVVSSGLGACLPDYPSVYTRVSAYLGWIGD 239 (241)
T ss_dssp CCTTCTTCEEEEESSSEEEEEEEEECCBCTTSCBCTTSCEEEEEGGGTHHHHHH
T ss_pred eecCcCCccEEEeCCCEEEEEEEEEeccCCCCccCCCCCEEEEEhHHhHhHHhh
Confidence 789999999996535 89999998 32 223322345666777777777765
No 78
>3rp2_A RAT MAST cell protease II; serine proteinase; 1.90A {Rattus rattus} SCOP: b.47.1.2
Probab=99.36 E-value=6.6e-11 Score=110.54 Aligned_cols=182 Identities=16% Similarity=0.171 Sum_probs=111.4
Q ss_pred CCceEEEEeeeeccCccccccccccCeEEEEEEEcCCCeEEecccccCCCCcEEEEeCC---------CcEEEEEEEEEc
Q 013014 126 TPSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD---------QSAYDAKIVGFD 196 (451)
Q Consensus 126 ~~SVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHVv~~~~~i~V~~~d---------g~~~~a~vv~~d 196 (451)
-|-+|.|......+ ....|+|.+|+++ +|||+|||+.. .+.|.+.. .+.+..+-+..|
T Consensus 12 ~Pw~v~l~~~~~~~----------~~~~CgGtLI~~~-~VLTAAhC~~~--~~~v~~g~~~~~~~~~~~~~~~v~~~~~h 78 (224)
T 3rp2_A 12 RPYMAHLDIVTEKG----------LRVICGGFLISRQ-FVLTAAHCKGR--EITVILGAHDVRKRESTQQKIKVEKQIIH 78 (224)
T ss_dssp CTTEEEEEEECTTS----------CEEEEEEEESSSS-EEEECGGGCCS--EEEEEESCSBTTSCCTTCEEEEEEEEEEC
T ss_pred CCcEEEEEEecCCC----------cEEEEEeEEeeCC-EEEEchhcCCC--CcEEEEeccccCcCCCCcEEEEEEEEEEC
Confidence 46677776432111 1347999999986 99999999854 45555531 234566666666
Q ss_pred CC-------CCEEEEEEcCCC---CCCcceecCCCC-CCCCCcEEEEeeCCCCCC-----CceEEeEEeeeeeeeccCCC
Q 013014 197 QD-------KDVAVLRIDAPK---DKLRPIPIGVSA-DLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISSAAT 260 (451)
Q Consensus 197 ~~-------~DlAlLkv~~~~---~~~~~l~l~~s~-~~~~G~~V~~iG~p~g~~-----~~~~~G~Vs~~~~~~~~~~~ 260 (451)
+. +||||||++.+. ....|+.|.... .+..|+.+++.||..... .......+.-+.........
T Consensus 79 p~y~~~~~~~DIALl~L~~~~~~~~~v~pi~l~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~ 158 (224)
T 3rp2_A 79 ESYNSVPNLHDIMLLKLEKKVELTPAVNVVPLPSPSDFIHPGAMCWAAGWGKTGVRDPTSYTLREVELRIMDEKACVDYR 158 (224)
T ss_dssp TTCCSSSCCSCCEEEEESSCCCCBTTBCCCCCCCTTCCCCTTCEEEEEESSEEETTEEECSBCEEEEEEEECGGGTTTTT
T ss_pred CCccCCCCCccEEEEEcCCCcccCCcccceecCCcccCCCCCCEEEEEeCCCCCCCCCCCceeeEeeeeecChHHhcccc
Confidence 64 599999998754 234566665332 357899999999863221 12223333322222221101
Q ss_pred CCCcccEEEEc-----ccCCCCCCCCceeCCCceEEEEEeeeeCCCCCccceeEEEeccCchhhHHHhh
Q 013014 261 GRPIQDVIQTD-----AAINPGNSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLV 324 (451)
Q Consensus 261 ~~~~~~~i~~d-----~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~ 324 (451)
.......+... ...+.|+|||||+. ++.++||++++.. +... .+....+...++||++.+
T Consensus 159 ~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~-~~~l~Gi~S~g~~-c~~~--p~vyt~v~~y~~WI~~~i 223 (224)
T 3rp2_A 159 YYEYKFQVCVGSPTTLRAAFMGDSGGPLLC-AGVAHGIVSYGHP-DAKP--PAIFTRVSTYVPWINAVI 223 (224)
T ss_dssp CCCTTTEEEECCTTSCCBCCTTTTTCEEEE-TTEEEEEEEECCT-TCCS--CEEEEEHHHHHHHHHHHH
T ss_pred ccCcCCEEEecCCCCCCeeccCCCCCeEEE-cceeeEEEEECCC-CCCC--CcEEEEHHHhHHHHHHHh
Confidence 11122334332 35678999999996 6799999998654 2222 556677777778877654
No 79
>2kjp_A Uncharacterized protein YLBL; mixed alpha-beta protein, cell membrane, hydrolase, membrane, protease, serine protease, transmembrane; NMR {Bacillus subtilis}
Probab=99.36 E-value=4.8e-13 Score=108.09 Aligned_cols=74 Identities=23% Similarity=0.267 Sum_probs=67.7
Q ss_pred cceEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEcCCHHHHHHHHhcCCCCCEEEEEEEECCeEEEEEEEe
Q 013014 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDELLLQGIKQPPVLSDNLRL 429 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i~~~~dl~~~l~~~~~g~~v~l~v~R~g~~~~~~v~l 429 (451)
.|++|.+|.++|||++ ||++ ||+|++|||++|.++.++..++...++|++++++|.|+|+.+++++++
T Consensus 1 ~Gv~V~~V~~~spA~~-GL~~-----------GD~I~~InG~~v~~~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~ 68 (91)
T 2kjp_A 1 NGIYASSVVENMPAKG-KIEV-----------GDKIISADGKNYQSAEKLIDYISSKKAGDKVTLKIEREEKEKRVTLTL 68 (91)
T ss_dssp CCSSCCCCCCSSCCSS-CCCS-----------SCEEEEETTBCCSSHHHHHHHHSSCCSSCEECEEEESSSCEECCCEEC
T ss_pred CceEEEEECCCChHHH-cCCC-----------CCEEEEECCEECCCHHHHHHHHHcCCCCCEEEEEEEECCEEEEEEEEE
Confidence 4889999999999999 9999 999999999999999999999988778999999999999999999998
Q ss_pred eecCCC
Q 013014 430 LWSEER 435 (451)
Q Consensus 430 ~~~~~~ 435 (451)
....+.
T Consensus 69 ~~~~~~ 74 (91)
T 2kjp_A 69 KQFPDE 74 (91)
T ss_dssp CCCTTC
T ss_pred eccCCC
Confidence 766543
No 80
>1p3c_A Glutamyl-endopeptidase; serine protease, hydrolase; 1.50A {Bacillus intermedius} SCOP: b.47.1.1 PDB: 1p3e_A
Probab=99.35 E-value=3.5e-12 Score=118.74 Aligned_cols=159 Identities=18% Similarity=0.200 Sum_probs=97.8
Q ss_pred CeEEEEEEEcCCCeEEecccccCCC--CcE----EEEeCC------CcEEEEEEEEEcC--------CCCEEEEEEcCCC
Q 013014 151 QGSGSGFVWDSKGHVVTNYHVIRGA--SDI----RVTFAD------QSAYDAKIVGFDQ--------DKDVAVLRIDAPK 210 (451)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHVv~~~--~~i----~V~~~d------g~~~~a~vv~~d~--------~~DlAlLkv~~~~ 210 (451)
...|+|++|+++ +|||+|||+.+. ..+ .|.+.. +..+..+-+..|+ .+||||||++.+.
T Consensus 29 ~~~CgGtLIs~~-~VLTAAHCv~~~~~~~~~~~~~v~~G~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~DiAll~L~~~~ 107 (215)
T 1p3c_A 29 GSSCTGTLIAPN-KILTNGHCVYNTASRSYSAKGSVYPGMNDSTAVNGSANMTEFYVPSGYINTGASQYDFAVIKTDTNI 107 (215)
T ss_dssp SCEEEEEEEETT-EEEECHHHHEETTTTEECCCCEEEETCBTTBCTTCCEEEEEEECCHHHHHHCCGGGCCEEEEESSCH
T ss_pred CceEEEEEEeCC-EEEECccEeccCCCCccccceEEEEcccCCCCCCCeEEEEEEEeCCccccCCCcccCEEEEEECCCC
Confidence 458999999986 999999999653 233 665532 2245555555543 4599999998642
Q ss_pred -CCCcceecCCCCCCCCCcEEEEeeCCCCCC----CceEEeEEeeeeeeeccCCCCCCcccEEEEcccCCCCCCCCceeC
Q 013014 211 -DKLRPIPIGVSADLLVGQKVYAIGNPFGLD----HTLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLD 285 (451)
Q Consensus 211 -~~~~~l~l~~s~~~~~G~~V~~iG~p~g~~----~~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPlvd 285 (451)
....|+.|... ....|+.++++||+.... .......+..+... .+ .....+...+.|+|||||+.
T Consensus 108 ~~~v~pi~l~~~-~~~~g~~~~~~Gwg~~~~~~~~~~l~~~~~~~~~~~-----~c----~~~~~~~~~C~GDSGgPl~~ 177 (215)
T 1p3c_A 108 GNTVGYRSIRQV-TNLTGTTIKISGYPGDKMRSTGKVSQWEMSGSVTRE-----DT----NLAYYTIDTFSGNSGSAMLD 177 (215)
T ss_dssp HHHHCCCCBCCC-SCCTTCEEEEEECCHHHHHHHSSCCCEEEEEECCEE-----CS----SEEEECCCCCTTCTTCEEEC
T ss_pred cccceeeecCCC-cccCCCeEEEecCCCCCcccccceechhccCccCcc-----cc----hheeeccccCCCCCCCeeEc
Confidence 12567777543 357899999999973211 11111111111111 01 11123567899999999998
Q ss_pred CCceEEEEEeeeeCCCCCccceeEEEeccCchhhHHHh
Q 013014 286 SSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQL 323 (451)
Q Consensus 286 ~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l 323 (451)
.+|.++||+++... ++ ...+....+....+|+++.
T Consensus 178 ~~g~lvGi~S~g~~-c~--~~p~v~t~v~~~~~WI~~~ 212 (215)
T 1p3c_A 178 QNQQIVGVHNAGYS-NG--TINGGPKATAAFVEFINYA 212 (215)
T ss_dssp TTSCEEEECCEEEG-GG--TEEEEEBCCHHHHHHHHHH
T ss_pred cCCeEEEEEecccC-CC--ccCceeEechHHHHHHHHH
Confidence 78999999997653 22 2233334445555666554
No 81
>2oq5_A Transmembrane protease, serine 11E; type II trans-membrane serine proteinases, trypsin-like serine protease, tumor marker, hydrolase; 1.61A {Homo sapiens}
Probab=99.35 E-value=1.7e-10 Score=108.57 Aligned_cols=172 Identities=12% Similarity=0.184 Sum_probs=108.2
Q ss_pred CeEEEEEEEcCCCeEEecccccCCC---CcEEEEeC-----CCcEEEEEEEEEcCC-------CCEEEEEEcCCC---CC
Q 013014 151 QGSGSGFVWDSKGHVVTNYHVIRGA---SDIRVTFA-----DQSAYDAKIVGFDQD-------KDVAVLRIDAPK---DK 212 (451)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHVv~~~---~~i~V~~~-----dg~~~~a~vv~~d~~-------~DlAlLkv~~~~---~~ 212 (451)
...|+|.+|+++ +|||+|||+.+. ..+.|.+. ++..+..+-+..|+. +||||||++.+. ..
T Consensus 23 ~~~CgGtLIs~~-~VLTAAhC~~~~~~~~~~~v~~G~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~~~~~~~ 101 (232)
T 2oq5_A 23 SHRCGATLINAT-WLVSAAHCFTTYKNPARWTASFGVTIKPSKMKRGLRRIIVHEKYKHPSHDYDISLAELSSPVPYTNA 101 (232)
T ss_dssp EEEEEEEEEETT-EEEECGGGGSSCCCGGGEEEEESSBSTTCSEEEEEEEEEECTTCCTTCCTTCCEEEEESSCCCCCSS
T ss_pred CeeEEEEEEcCC-EEEECHHHcCCCCCCceEEEEEeeEECCCceEEeEEEEEeCCCCCCCCCCCCEEEEEecCCCccCCc
Confidence 357999999987 999999999763 45677663 234555665666653 599999998764 23
Q ss_pred CcceecCCCC-CCCCCcEEEEeeCCCCCC-----CceEEeEEeeeeeeeccCC---CCCCcccEEEEc-----ccCCCCC
Q 013014 213 LRPIPIGVSA-DLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISSAA---TGRPIQDVIQTD-----AAINPGN 278 (451)
Q Consensus 213 ~~~l~l~~s~-~~~~G~~V~~iG~p~g~~-----~~~~~G~Vs~~~~~~~~~~---~~~~~~~~i~~d-----~~i~~G~ 278 (451)
..|+.|.... .+..|+.+++.||..... .......+.-+........ .......++... ...+.|+
T Consensus 102 v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GD 181 (232)
T 2oq5_A 102 VHRVCLPDASYEFQPGDVMFVTGFGALKNDGYSQNHLRQAQVTLIDATTCNEPQAYNDAITPRMLCAGSLEGKTDACQGD 181 (232)
T ss_dssp SCCCBCCCTTCCCCTTCEEEEEESCCSSTTCCCCSBCEEEEEEEECHHHHTSTTTTTTCCCTTEEEEECTTCSSBCCTTC
T ss_pred eeEeECCCccccCCCCCEEEEEECCccCCCCCCCceeeEeEEEEeCHHHcCCccccCCccCCCEEeecCCCCCCccCCCC
Confidence 5677775432 356799999999874321 2233333333332222110 011113344432 3578999
Q ss_pred CCCceeCCC--c--eEEEEEeeeeCCCCCccceeEEEeccCchhhHHHhh
Q 013014 279 SGGPLLDSS--G--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLV 324 (451)
Q Consensus 279 SGGPlvd~~--G--~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~ 324 (451)
|||||+..+ | .++||+++.. .++.....+....+...++|+++..
T Consensus 182 sGgPL~~~~~~~~~~l~GI~S~g~-~C~~~~~p~vyt~V~~~~~WI~~~~ 230 (232)
T 2oq5_A 182 SGGPLVSSDARDIWYLAGIVSWGD-ECAKPNKPGVYTRVTALRDWITSKT 230 (232)
T ss_dssp TTCEEEEECTTSCEEEEEEEEECS-SSSBTTBCEEEEETGGGHHHHHHHH
T ss_pred CCCcEEEECCCCCEEEEEEEEeCC-CCCCCCCCeEEEEhHHhHHHHHHHh
Confidence 999999533 3 6999999864 2332234566677888888887643
No 82
>1euf_A Duodenase; serine protease, dual specificity, hydrola; HET: NAG; 2.40A {Bos taurus} SCOP: b.47.1.2
Probab=99.35 E-value=9.3e-11 Score=110.13 Aligned_cols=167 Identities=19% Similarity=0.168 Sum_probs=104.7
Q ss_pred eEEEEEEEcCCCeEEecccccCCCCcEEEEeCC---------CcEEEEEEEEEcCC-------CCEEEEEEcCCC---CC
Q 013014 152 GSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD---------QSAYDAKIVGFDQD-------KDVAVLRIDAPK---DK 212 (451)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHVv~~~~~i~V~~~d---------g~~~~a~vv~~d~~-------~DlAlLkv~~~~---~~ 212 (451)
..|+|.+|+++ +|||+|||+.+ .+.|++.. .+.+..+-+..|+. +||||||++.+. ..
T Consensus 27 ~~CgGsLI~~~-~VLTAAHC~~~--~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~~~~~~~ 103 (227)
T 1euf_A 27 HICGGFLVRED-FVLTAAHCLGS--SINVTLGAHNIMERERTQQVIPVRRPIPHPDYNDETLANDIMLLKLTRKADITDK 103 (227)
T ss_dssp EEEEEEEEETT-EEEECGGGCCE--EEEEEESCSBTTSCCTTCEEEEEEEEEECTTCCTTTCTTCCEEEEESSCCCCCSS
T ss_pred eEEEEEEeeCC-EEEECHHHCCC--CcEEEEcccccCCCCCccEEEEEEEEEeCCCCCCCCCcCceEEEEECCcCcCCCc
Confidence 47999999987 99999999975 45555532 24456665666653 599999998754 24
Q ss_pred CcceecCCCC-CCCCCcEEEEeeCCCCCC-----CceEEeEEeeeeeeeccCCCC-CCcccEEEEc-----ccCCCCCCC
Q 013014 213 LRPIPIGVSA-DLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISSAATG-RPIQDVIQTD-----AAINPGNSG 280 (451)
Q Consensus 213 ~~~l~l~~s~-~~~~G~~V~~iG~p~g~~-----~~~~~G~Vs~~~~~~~~~~~~-~~~~~~i~~d-----~~i~~G~SG 280 (451)
..|+.|.... .+..|+.+.+.||..... .......+.-+.......... .....++... ...+.|+||
T Consensus 104 v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~~~GDsG 183 (227)
T 1euf_A 104 VSPINLPRSLAEVKPGMMCSVAGWGRLGVNMPSTDKLQEVDLEVQSEEKCIARFKNYIPFTQICAGDPSKRKNSFSGDSG 183 (227)
T ss_dssp CCCCCCCCTTCCCCTTCEEEEEESCBSSTTCCBCSBCEEEEEEBCCTHHHHTTCTTCCTTTEEEESCTTSCCBCCTTCTT
T ss_pred eeccCCCCccccCCCCCEEEEEEEccCCCCCCCchhheEeEeccccHHHhhHhhcCcCCCcEEEccCCCCCCcccccCCC
Confidence 5677775432 357899999999864321 122333333222221111110 1112344432 223489999
Q ss_pred CceeCCCceEEEEEeeeeCCCCCccceeEEEeccCchhhHHHhhh
Q 013014 281 GPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (451)
Q Consensus 281 GPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (451)
|||+. +|.++||++++ ++.....+....+...++|+++.++
T Consensus 184 gPL~~-~~~l~Gi~S~g---c~~~~~p~vyt~V~~y~~WI~~~~~ 224 (227)
T 1euf_A 184 GPLVC-NGVAQGIVSYG---RNDGTTPDVYTRISSFLSWIHSTMR 224 (227)
T ss_dssp CEEEE-TTEEEEEEEEC---CTTCCSCEEEEEGGGTHHHHHHHTC
T ss_pred CceEE-CCEEEEEEEEe---CCCCCCCeEEEEHHHhHHHHHHHHh
Confidence 99996 68999999986 2222335667778888888877653
No 83
>1aut_C Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: b.47.1.2 PDB: 3f6u_H*
Probab=99.34 E-value=3.9e-11 Score=114.42 Aligned_cols=174 Identities=18% Similarity=0.240 Sum_probs=109.6
Q ss_pred CeEEEEEEEcCCCeEEecccccCCCCcEEEEeCC---------CcEEEEEEEEEcCC-------CCEEEEEEcCCC---C
Q 013014 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD---------QSAYDAKIVGFDQD-------KDVAVLRIDAPK---D 211 (451)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHVv~~~~~i~V~~~d---------g~~~~a~vv~~d~~-------~DlAlLkv~~~~---~ 211 (451)
...|+|.+|+++ +|||+|||+.+...+.|++.. +..+..+-+..|+. +|||||+++.+. .
T Consensus 24 ~~~CgGsLI~~~-~VLTAAHC~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~~~~ 102 (250)
T 1aut_C 24 KLACGAVLIHPS-WVLTAAHCMDESKKLLVRLGEYDLRRWEKWELDLDIKEVFVHPNYSKSTTDNDIALLHLAQPATLSQ 102 (250)
T ss_dssp CEEEEEEEEETT-EEEECGGGSSSCSCCEEEESCCBTTCCCTTCEEEEEEEEEECTTCBTTTTBTCCEEEEESSCCCCBT
T ss_pred ceEEEEEEeeCC-EEEEChHHcCCCCceEEEEcccccCCCCCccEEEEEEEEEECCCCCCCCCCCcEEEEEECCcccCCC
Confidence 457999999987 999999999887777777642 23456666666654 599999998764 2
Q ss_pred CCcceecCCCC-----CCCCCcEEEEeeCCCCCCC----------ceEEeEEeeeeeeeccC-CCCCCcccEEEEc----
Q 013014 212 KLRPIPIGVSA-----DLLVGQKVYAIGNPFGLDH----------TLTTGVISGLRREISSA-ATGRPIQDVIQTD---- 271 (451)
Q Consensus 212 ~~~~l~l~~s~-----~~~~G~~V~~iG~p~g~~~----------~~~~G~Vs~~~~~~~~~-~~~~~~~~~i~~d---- 271 (451)
...|+.|.... ....|+.+++.||...... ......+.-+....+.. ........++...
T Consensus 103 ~v~picLp~~~~~~~~~~~~g~~~~v~GwG~~~~~~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~~~~~Cag~~~~ 182 (250)
T 1aut_C 103 TIVPICLPDSGLAERELNQAGQETLVTGWGYHSSREKEAKRNRTFVLNFIKIPVVPHNECSEVMSNMVSENMLCAGILGD 182 (250)
T ss_dssp TBCCCBCCCHHHHHHTTTSTTCEEEEEECCCCCSCCSCCCSSCSSBCEEEEEEEECHHHHHHHCSSCCCTTEEEECCTTC
T ss_pred ceeeeEcCCCccccccccCCCCEEEEEEeCCCCCCCccccccccceeeEEEEEEecHHHhhHHhccCCCCCEEEeCCCCC
Confidence 34566664321 2357999999998743221 12222222222111110 0011113344432
Q ss_pred -ccCCCCCCCCceeCC-Cce--EEEEEeeeeCCCCCccceeEEEeccCchhhHHHhhhc
Q 013014 272 -AAINPGNSGGPLLDS-SGS--LIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKF 326 (451)
Q Consensus 272 -~~i~~G~SGGPlvd~-~G~--VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~~ 326 (451)
...+.|+|||||+.. +|+ ++||+++... ++.....+....+....+||++.++.
T Consensus 183 ~~~~C~GDSGGPL~~~~~g~~~l~GI~S~g~~-C~~~~~p~vyt~V~~y~~WI~~~~~~ 240 (250)
T 1aut_C 183 RQDACEGDSGGPMVASFHGTWFLVGLVSWGEG-CGLLHNYGVYTKVSRYLDWIHGHIRD 240 (250)
T ss_dssp CCBCCTTCTTCEEEEEETTEEEEEEEEEECSS-SSCTTCCEEEECGGGTHHHHHHHHC-
T ss_pred CCCCCCCCCchheEEEECCeEEEEEEEEECCC-CCCCCCCEEEEEHHHHHHHHHHHhhc
Confidence 357899999999953 564 9999998642 33333456778888888888876653
No 84
>3ncl_A Suppressor of tumorigenicity 14 protein; proteinase-inhibitor complex, serine proteinase, benzamidine phosphonate, serine endopeptidases; HET: CCZ; 1.19A {Homo sapiens} SCOP: b.47.1.2 PDB: 3bn9_B* 3nps_A 3so3_A* 1eax_A 1eaw_A 2gv6_A* 2gv7_A* 3p8g_A* 3p8f_A*
Probab=99.34 E-value=8.4e-11 Score=110.98 Aligned_cols=171 Identities=15% Similarity=0.181 Sum_probs=107.0
Q ss_pred eEEEEEEEcCCCeEEecccccCCC--------CcEEEEeC----------CCcEEEEEEEEEcC-------CCCEEEEEE
Q 013014 152 GSGSGFVWDSKGHVVTNYHVIRGA--------SDIRVTFA----------DQSAYDAKIVGFDQ-------DKDVAVLRI 206 (451)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHVv~~~--------~~i~V~~~----------dg~~~~a~vv~~d~-------~~DlAlLkv 206 (451)
..|+|.+|+++ +|||+|||+.+. ..+.|.+. ..+.+..+-+..|+ .+||||||+
T Consensus 25 ~~CgGtLI~~~-~VLTAAhC~~~~~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L 103 (241)
T 3ncl_A 25 HICGASLISPN-WLVSAAHCYIDDRGFRYSDPTQWTAFLGLHDQSQRSAPGVQERRLKRIISHPFFNDFTFDYDIALLEL 103 (241)
T ss_dssp EEEEEEECSSS-EEEECGGGGCCBTTBCTTCGGGEEEEESCSBTTCTTSTTCEEEEEEEEEECTTCCTTTCTTCCEEEEE
T ss_pred eEEEEEEeeCC-EEEEcHHhcccCCCccccCCceEEEEEeccccccCCCCCceEEEEEEEEECCCCCCCCCCCcEEEEEE
Confidence 47999999986 999999999643 45666653 12456666667776 459999999
Q ss_pred cCCC---CCCcceecCCC-CCCCCCcEEEEeeCCCCCC-----CceEEeEEeeeeeeeccCCC-CCCcccEEEE-----c
Q 013014 207 DAPK---DKLRPIPIGVS-ADLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISSAAT-GRPIQDVIQT-----D 271 (451)
Q Consensus 207 ~~~~---~~~~~l~l~~s-~~~~~G~~V~~iG~p~g~~-----~~~~~G~Vs~~~~~~~~~~~-~~~~~~~i~~-----d 271 (451)
+.+. ....|+.|... ..+..|+.+++.||..... .......+.-+......... ......++.. .
T Consensus 104 ~~~~~~~~~v~piclp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~ 183 (241)
T 3ncl_A 104 EKPAEYSSMVRPISLPDASHVFPAGKAIWVTGWGHTQYGGTGALILQKGEIRVINQTTCENLLPQQITPRMMCVGFLSGG 183 (241)
T ss_dssp SSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESSBSSTTSCBCSBCEEEEEEECCHHHHHHHSTTTCCTTEEEEECTTCS
T ss_pred CCCCcccCccCceEcCCcccCCCCCCEEEEEEecccCCCCCcCceeeEEeEEEECHHHhhhhcccCCCCCeEEeCCCCCC
Confidence 8754 23567777543 2356899999999864321 12233333322222111100 1111233433 2
Q ss_pred ccCCCCCCCCceeC--CCce--EEEEEeeeeCCCCCccceeEEEeccCchhhHHHhh
Q 013014 272 AAINPGNSGGPLLD--SSGS--LIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLV 324 (451)
Q Consensus 272 ~~i~~G~SGGPlvd--~~G~--VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~ 324 (451)
...+.|+|||||+. .+|+ ++||+++... ++.....+....+...++||++..
T Consensus 184 ~~~C~GDsGgPl~~~~~~g~~~l~Gi~S~g~~-c~~~~~p~vyt~v~~y~~WI~~~~ 239 (241)
T 3ncl_A 184 VDSCQGDSGGPLSSVEADGRIFQAGVVSWGDG-CAQRNKPGVYTRLPLFRDWIKENT 239 (241)
T ss_dssp SBCCTTCTTCEEEEECTTSCEEEEEEEEECSS-SSCTTCCEEEEESGGGHHHHHHHH
T ss_pred CccCCCcCCCCEEEEcCCCcEEEEEEEEECCC-CCCCCCCeEEEEHHHHHHHHHHHh
Confidence 35789999999983 3555 8999998643 333334567778888888887643
No 85
>3fzz_A Granzyme C; hydrolase, cytolysis, protease, serine protease, zymogen; 2.50A {Mus musculus} SCOP: b.47.1.2 PDB: 3g01_A
Probab=99.34 E-value=1.2e-10 Score=108.96 Aligned_cols=183 Identities=18% Similarity=0.183 Sum_probs=113.2
Q ss_pred CCceEEEEeeeeccCccccccccccCeEEEEEEEcCCCeEEecccccCCCCcEEEEeCC---------CcEEEEEEEEEc
Q 013014 126 TPSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD---------QSAYDAKIVGFD 196 (451)
Q Consensus 126 ~~SVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHVv~~~~~i~V~~~d---------g~~~~a~vv~~d 196 (451)
-|-+|.|......+ ....|+|.+|+++ +|||+|||+.. .+.|.+.. ++.+..+-+..|
T Consensus 12 ~Pw~v~l~~~~~~~----------~~~~CgGtLI~~~-~VLTAAHC~~~--~~~v~~G~~~~~~~~~~~~~~~v~~~~~h 78 (227)
T 3fzz_A 12 RPYMAYYEFLKVGG----------KKMFCGGFLVRDK-FVLTAAHCKGR--SMTVTLGAHNIKAKEETQQIIPVAKAIPH 78 (227)
T ss_dssp STTEEEEEEECSSS----------CEEEEEEEEEETT-EEEECTTCCCE--EEEEEESCSBTTSCCTTCEEEEEEEEEEC
T ss_pred cCCEEEEEEEeCCC----------ceeEEEEEEEeCC-EEEECcccCCC--CcEEEEcccccCCCCCCceEEEEEEEEEC
Confidence 46677776432111 1347999999987 99999999853 45555531 244666666667
Q ss_pred CC-------CCEEEEEEcCCC---CCCcceecCCCC-CCCCCcEEEEeeCCCCCC-----CceEEeEEeeeeeeecc--C
Q 013014 197 QD-------KDVAVLRIDAPK---DKLRPIPIGVSA-DLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISS--A 258 (451)
Q Consensus 197 ~~-------~DlAlLkv~~~~---~~~~~l~l~~s~-~~~~G~~V~~iG~p~g~~-----~~~~~G~Vs~~~~~~~~--~ 258 (451)
+. +|||||+++.+. ....|+.|.... .+..|+.+++.||..... .......+.-+...... +
T Consensus 79 p~y~~~~~~~DIALl~L~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~ 158 (227)
T 3fzz_A 79 PDYNPDDRSNDIMLLKLVRNAKRTRAVRPLNLPRRNAHVKPGDECYVAGWGKVTPDGEFPKTLHEVKLTVQKDQVCESQF 158 (227)
T ss_dssp TTCBTTTTBTCCEEEEESSCCCCBTTBCCCCCCCTTCCCCTTCEEEEEESSCSSTTSCCCSBCEEEEEEBCCHHHHHHHH
T ss_pred cCCCCCCCcCCEEEEEECCcCCCCCcccccCCCCcccCCCCCCEEEEEECCcccCCCCCCCeeeEEEeeeecHHHhhhhh
Confidence 65 599999998654 235677775432 357899999999864321 12233333322222111 0
Q ss_pred CCCCCcccEEEE-----cccCCCCCCCCceeCCCceEEEEEeeeeCCCCCccceeEEEeccCchhhHHHhhh
Q 013014 259 ATGRPIQDVIQT-----DAAINPGNSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (451)
Q Consensus 259 ~~~~~~~~~i~~-----d~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (451)
.........+.. ....+.|+|||||+. ++.++||+++... ++. ..+....+...++||++.++
T Consensus 159 ~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~-~~~l~Gi~S~g~~-c~~--~p~vyt~V~~~~~WI~~~i~ 226 (227)
T 3fzz_A 159 QSSYNRANEICVGDSKIKGASFEEDSGGPLVC-KRAAAGIVSYGQT-DGS--APQVFTRVLSFVSWIKKTMK 226 (227)
T ss_dssp TTTCCTTTEEEECCCSSCBCCTTTTTTCEEEE-TTEEEEEEEECCT-TCS--SSEEEEEGGGTHHHHHHHHT
T ss_pred ccccCCCceEEEeCCCCCCcccccCCccceEE-ecCCcEEEEECCC-CCC--CCeEEEEhHHhHHHHHHHHh
Confidence 011111233433 235678999999996 5699999998653 222 25677788888888887654
No 86
>2r0l_A Hepatocyte growth factor activator; serine protease, antibody, allosteric inhibitor, EGF-like DO glycoprotein, hydrolase, kringle, secreted; HET: NAG BMA; 2.20A {Homo sapiens} PDB: 3k2u_A* 2wub_A* 2wuc_A*
Probab=99.34 E-value=1.2e-10 Score=110.76 Aligned_cols=174 Identities=17% Similarity=0.210 Sum_probs=110.6
Q ss_pred CeEEEEEEEcCCCeEEecccccCCC---CcEEEEeCC---------CcEEEEEEEEEcC--------CCCEEEEEEcCC-
Q 013014 151 QGSGSGFVWDSKGHVVTNYHVIRGA---SDIRVTFAD---------QSAYDAKIVGFDQ--------DKDVAVLRIDAP- 209 (451)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHVv~~~---~~i~V~~~d---------g~~~~a~vv~~d~--------~~DlAlLkv~~~- 209 (451)
...|+|.+|+++ +|||+|||+.+. ..+.|.+.. .+.+..+-+..++ .+|||||+++.+
T Consensus 22 ~~~CgGsLIs~~-~VLTAAHC~~~~~~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~DiALl~L~~~~ 100 (248)
T 2r0l_A 22 DSFCAGSLVHTC-WVVSAAHCFSHSPPRDSVSVVLGQHFFNRTTDVTQTFGIEKYIPYTLYSVFNPSDHDLVLIRLKKKG 100 (248)
T ss_dssp TEEEEEEEEETT-EEEECGGGGTTCCCGGGEEEEESCCBTTCCCSSCEEECEEEEEECTTCCTTSTTTTCCEEEEECCSS
T ss_pred CceEEEEEEcCC-EEEECHHHcCCCCCcCcEEEEEEeEEcCCCCCccEEEeeeEEEeCCccCcCCCCCCCEEEEEeCCcc
Confidence 357999999987 999999999764 467777642 2345555554443 359999999865
Q ss_pred ---C---CCCcceecCCC-CCCCCCcEEEEeeCCCCCC------CceEEeEEeeeeeeeccCC--CC-CCcccEEEEc--
Q 013014 210 ---K---DKLRPIPIGVS-ADLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISSAA--TG-RPIQDVIQTD-- 271 (451)
Q Consensus 210 ---~---~~~~~l~l~~s-~~~~~G~~V~~iG~p~g~~------~~~~~G~Vs~~~~~~~~~~--~~-~~~~~~i~~d-- 271 (451)
. ....|+.|... ..+..|+.+++.||..... .......+.-+........ .+ .....++...
T Consensus 101 ~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~ 180 (248)
T 2r0l_A 101 DRCATRSQFVQPICLPEPGSTFPAGHKCQIAGWGHLDENVSGYSSSLREALVPLVADHKCSSPEVYGADISPNMLCAGYF 180 (248)
T ss_dssp SCSSCCBTTBCCCBCCCTTCCCCTTCEEEEEESCCSSSSCCSCCSBCEEEEEEBCCHHHHTSTTTTGGGCCTTEEEESCS
T ss_pred cccccCCCcEEEEECCCCCCCCCCCCEEEEEEccccCCCCCCCCchheEEEEeeeCHHHhCCccccCCcCCCCEEeECCC
Confidence 1 23567777543 3456899999999874321 2233333433332222110 00 0112344432
Q ss_pred ---ccCCCCCCCCceeCC-Cc--eEEEEEeeeeCCCCCccceeEEEeccCchhhHHHhhhc
Q 013014 272 ---AAINPGNSGGPLLDS-SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKF 326 (451)
Q Consensus 272 ---~~i~~G~SGGPlvd~-~G--~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~~ 326 (451)
...+.|+|||||+.. +| .++||+++.. .++.....+....+....+|+++.++.
T Consensus 181 ~~~~~~C~GDSGgPL~~~~~g~~~l~GI~S~g~-~C~~~~~p~vyt~V~~~~~WI~~~~~~ 240 (248)
T 2r0l_A 181 DCKSDACQGDSGGPLACEKNGVAYLYGIISWGD-GCGRLHKPGVYTRVANYVDWINDRIRP 240 (248)
T ss_dssp SSCCBCCTTCTTCEEEEEETTEEEEEEEEEECS-TTTCTTCCEEEEEGGGGHHHHHHHHC-
T ss_pred CCCCcCCCCccCCeEEEEECCcEEEEEEEEeCC-CCCCCCCCcEEEEHHHHHHHHHHHhcC
Confidence 357899999999964 45 5999999864 344334456778888888888876653
No 87
>1pyt_D TC, PCPA-TC, chymotrypsinogen C; ternary complex (zymogen), serine proteinase, C-terminal peptidase; 2.35A {Bos taurus} SCOP: b.47.1.2
Probab=99.34 E-value=1.3e-10 Score=110.77 Aligned_cols=188 Identities=15% Similarity=0.160 Sum_probs=116.2
Q ss_pred CCceEEEEeeeeccCccccccccccCeEEEEEEEcCCCeEEecccccCCCCcEEEEeCC----------CcEEEEEEEEE
Q 013014 126 TPSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD----------QSAYDAKIVGF 195 (451)
Q Consensus 126 ~~SVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHVv~~~~~i~V~~~d----------g~~~~a~vv~~ 195 (451)
-|-.|.|...... .....|+|.+|+++ +|||+|||+.+...+.|.+.. ...+..+-+..
T Consensus 25 ~Pw~v~l~~~~~~----------~~~~~CgGtLIs~~-~VLTAAHC~~~~~~~~V~~G~~~~~~~~~~~~~~~~v~~i~~ 93 (251)
T 1pyt_D 25 WPWQISLQYLRDN----------TWRHTCGGTLITPN-HVLTAAHCISNTLTYRVALGKNNLEVEDEAGSLYVGVDTIFV 93 (251)
T ss_dssp STTEEEEEEEETT----------EEEEEEEEEEEETT-EEEECGGGCCTTCCEEEEESCSBTTCSCCSSCEEEEEEEEEE
T ss_pred CCceEEEEEEcCC----------CcceEEEeEEecCC-EEEECHHHhCCCceEEEEEcccccccCCCCCcEEEEEEEEEE
Confidence 4677887543111 12347999999987 999999999987788887632 13455666666
Q ss_pred cCC-------CCEEEEEEcCCC---CCCcceecCCCC-CCCCCcEEEEeeCCCCCC-----CceEEeEEeeeeeeeccCC
Q 013014 196 DQD-------KDVAVLRIDAPK---DKLRPIPIGVSA-DLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISSAA 259 (451)
Q Consensus 196 d~~-------~DlAlLkv~~~~---~~~~~l~l~~s~-~~~~G~~V~~iG~p~g~~-----~~~~~G~Vs~~~~~~~~~~ 259 (451)
|+. +|||||+++.+. ....|+.|.... .+..|+.+++.||..... .......+.-+........
T Consensus 94 Hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~ 173 (251)
T 1pyt_D 94 HEKWNSFLVRNDIALIKLAETVELGDTIQVACLPSEGSLLPQDYPCFVTGWGRLYTNGPIAAELQQGLQPVVDYATCSQR 173 (251)
T ss_dssp CTTCBTTTTBSCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEECBCCCSSCCSCCCSBCBCCEEECBCHHHHTST
T ss_pred CCCCCCCCCCCCEEEEEECCCcccCCCeeeeEcCCCcccCCCCCEEEEEecccCCCCCCcccchheeEeEeeCHHHcchh
Confidence 653 599999998754 235677775433 356789999999874321 1222222222222111110
Q ss_pred ---CCCCcccEEEEc----ccCCCCCCCCceeCC-Cc--eEEEEEeeeeC-CCCCccceeEEEeccCchhhHHHhh
Q 013014 260 ---TGRPIQDVIQTD----AAINPGNSGGPLLDS-SG--SLIGINTAIYS-PSGASSGVGFSIPVDTVNGIVDQLV 324 (451)
Q Consensus 260 ---~~~~~~~~i~~d----~~i~~G~SGGPlvd~-~G--~VVGI~s~~~~-~~~~~~~~~~aIP~~~i~~~l~~l~ 324 (451)
.......++-.. ...+.|+|||||+.. +| .++||+++... .++.....+....+....+||++.+
T Consensus 174 ~~~~~~~~~~~~Ca~~~~~~~~C~GDSGgPL~~~~~~~~~l~GI~S~g~~~~C~~~~~p~vyt~V~~~~~WI~~~~ 249 (251)
T 1pyt_D 174 DWWGTTVKETMVCAGGDGVISACNGDSGGPLNCQADGQWDVRGIVSFGSGLSCNTFKKPTVFTRVSAYIDWINQKL 249 (251)
T ss_dssp TTTTTTCCTTEEEECCSCSSCCCCSCTTCEEEEESSSSEEEEEEEEECCSSCTTBTTBCEEEEEGGGGHHHHHHHT
T ss_pred hccCCCcCCCeEEecCCCCCccCCCCCCCceEEEECCCEEEEEEEEECCCCCCCCCCCCeEEEEHHHHHHHHHHHh
Confidence 011112344432 357899999999853 45 69999998742 3443334566777888888887654
No 88
>3tvj_B Mannan-binding lectin serine protease 2 B chain; in vitro evolution, specific inhibitor, allostery, hydrolase; 1.28A {Homo sapiens} PDB: 4fxg_H*
Probab=99.34 E-value=5.4e-11 Score=112.19 Aligned_cols=174 Identities=16% Similarity=0.170 Sum_probs=109.6
Q ss_pred CeEEEEEEEcCCCeEEecccccCC----CCcEEEEeCCC-------cEEEEEEEEEcC--------CCCEEEEEEcCCC-
Q 013014 151 QGSGSGFVWDSKGHVVTNYHVIRG----ASDIRVTFADQ-------SAYDAKIVGFDQ--------DKDVAVLRIDAPK- 210 (451)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHVv~~----~~~i~V~~~dg-------~~~~a~vv~~d~--------~~DlAlLkv~~~~- 210 (451)
...|+|.+|+++ +|||+|||+.+ ...+.|.+... ..+..+.+..|+ .+||||||++.+.
T Consensus 21 ~~~CgGtLI~~~-~VLTAAhC~~~~~~~~~~~~v~~g~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~DIALl~L~~~v~ 99 (242)
T 3tvj_B 21 GTTAAGALLYDN-WVLTAAHAVYEQKHDASALDIRMGTLKRLSPHYTQAWSEAVFIHEGYTHDAGFDNDIALIKLNNKVV 99 (242)
T ss_dssp SEEEEEEEETTT-EEEECHHHHSTTTTCSSCCEEEESCSBTTCSCCEEEEEEEEEECTTCCTTSCSTTCCEEEEESSCCC
T ss_pred CCcEEEEEecCC-EEEECHHHCCCCCCCcceEEEEeccccccCcccceeeEEEEEeCCCCCCCCCCcCcEEEEEECCccc
Confidence 347999999986 99999999954 44566766431 344455555554 3599999998764
Q ss_pred --CCCcceecCCCC---CCCCCcEEEEeeCCCCCC----CceEEeEEeeeeeeeccC--C-----CCCCcccEEEE----
Q 013014 211 --DKLRPIPIGVSA---DLLVGQKVYAIGNPFGLD----HTLTTGVISGLRREISSA--A-----TGRPIQDVIQT---- 270 (451)
Q Consensus 211 --~~~~~l~l~~s~---~~~~G~~V~~iG~p~g~~----~~~~~G~Vs~~~~~~~~~--~-----~~~~~~~~i~~---- 270 (451)
....|+.|.... .+..|+.+.+.||..... .......+.-+....... . .......++..
T Consensus 100 ~~~~v~picLp~~~~~~~~~~~~~~~~~GwG~~~~~~~~~~l~~~~~~i~~~~~C~~~~~~~~~~~~~~~~~~~Ca~~~~ 179 (242)
T 3tvj_B 100 INSNITPICLPRKEAESFMRTDDIGTASGWGLTQRGFLARNLMYVDIPIVDHQKCTAAYEKPPYPRGSVTANMLCAGLES 179 (242)
T ss_dssp CBTTBCCCBCCCTTGGGGSCTTCEEEEEESCCCTTSSCCSBCEEEEEEBCCHHHHHHHHHSTTSCTTCCCTTEEEESCTT
T ss_pred cCCCEecCCcCCCcccccccCCCEEEEEEeCCCCCCCcCccceEEeeeEEcHHHHHHhhccCCcccccccCCeEEECCCC
Confidence 346777775443 267899999999875432 122333333222211110 0 00112334443
Q ss_pred -cccCCCCCCCCceeCC---Cc--eEEEEEeeeeCCCCCccceeEEEeccCchhhHHHhhh
Q 013014 271 -DAAINPGNSGGPLLDS---SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (451)
Q Consensus 271 -d~~i~~G~SGGPlvd~---~G--~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (451)
....+.|+|||||+.. +| .++||+++....++.....+....+...++|+++.++
T Consensus 180 ~~~~~C~GDsGgPL~~~~~~~~~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~i~ 240 (242)
T 3tvj_B 180 GGKDSCRGDSGGALVFLDSETERWFVGGIVSWGSMNCGEAGQYGVYTKVINYIPWIENIIS 240 (242)
T ss_dssp CCSBCCTTCTTCEEEEEETTTTEEEEEEEEEEEESSTTCTTCCEEEEEGGGGHHHHHHHHH
T ss_pred CCCccccCCCCCeEEEEeCCCCcEEEEEEEEeCCCCCCCCCCCeEEEEHHHHHHHHHHHHh
Confidence 2457899999999852 33 4999999875455544445777888888888887654
No 89
>3mhw_U Urokinase-type plasminogen activator; hydrolase, blood coagulation, fibrinolysis, plasminogen activation; HET: ABV; 1.45A {Homo sapiens} SCOP: b.47.1.2 PDB: 1w10_U* 1w11_U* 1w12_U* 1w13_U* 1w14_U* 1w0z_U* 2vip_A* 1f5k_U 1f5l_A* 1f92_A* 2r2w_U* 2vin_A* 2vio_A* 1ejn_A* 2viq_A* 2viv_A* 2viw_A* 1vja_U* 1vj9_U* 1sc8_U* ...
Probab=99.33 E-value=1.4e-10 Score=109.66 Aligned_cols=171 Identities=17% Similarity=0.198 Sum_probs=107.8
Q ss_pred eEEEEEEEcCCCeEEecccccCCC---CcEEEEeCC---------CcEEEEEEEEEcCC---------CCEEEEEEcCC-
Q 013014 152 GSGSGFVWDSKGHVVTNYHVIRGA---SDIRVTFAD---------QSAYDAKIVGFDQD---------KDVAVLRIDAP- 209 (451)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHVv~~~---~~i~V~~~d---------g~~~~a~vv~~d~~---------~DlAlLkv~~~- 209 (451)
..|+|.+|+++ +|||+|||+.+. ..+.|.+.. ++.+..+-+..|+. +|||||+++.+
T Consensus 29 ~~CgGtLI~~~-~VLTAAHC~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~~DIALl~L~~~~ 107 (247)
T 3mhw_U 29 YVCGGSLISPC-WVISATHCFIDYPKKEDYIVYLGRSRLNSNTQGEMKFEVENLILHKDYSADTLAHHNDIALLKIRSKE 107 (247)
T ss_dssp EEEEEEEEETT-EEEECGGGTTTSCCGGGEEEEESCCBSSSCCTTCEEEEEEEEEECTTCEEC-CCEESCCEEEEEECTT
T ss_pred eEEEEEEEeCC-EEEEcHHhCcCCCCCccEEEEeccccccCCCCCCEEEEEEEEEECCCCCCCcCCCCCcEEEEEeCCcc
Confidence 47999999987 999999999653 356676632 23566666666654 49999999865
Q ss_pred ------CCCCcceecCCC-CCCCCCcEEEEeeCCCCCC------CceEEeEEeeeeeeeccCC--C-CCCcccEEEE---
Q 013014 210 ------KDKLRPIPIGVS-ADLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISSAA--T-GRPIQDVIQT--- 270 (451)
Q Consensus 210 ------~~~~~~l~l~~s-~~~~~G~~V~~iG~p~g~~------~~~~~G~Vs~~~~~~~~~~--~-~~~~~~~i~~--- 270 (451)
.....|+.|... ..+..|+.+++.||..... .......+.-+........ . ......++..
T Consensus 108 ~~~~~~~~~v~pi~lp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~ 187 (247)
T 3mhw_U 108 GRCAQPSRTIQTISLPSMYNDPQFGTSCEITGFGKENSTDYLYPEQLKMTVVKLISHRECQQPHYYGSEVTTKMLCAADP 187 (247)
T ss_dssp SCCCCCBTTBCCCBCCCTTCCCCTTCEEEEEESCCSSTTCSSCCSBCEEEEEEEECHHHHTSTTTTGGGCCTTEEEEECT
T ss_pred ccccccCCcccccccCCCcCCCCCCCEEEEEecCCcCCCCcccchhheeeEEEEEChHHhcCccccCCcCCCCeEecCCC
Confidence 134566666543 3467799999999875422 1233333332222222110 0 0111233433
Q ss_pred --cccCCCCCCCCceeCC-Cc--eEEEEEeeeeCCCCCccceeEEEeccCchhhHHHhh
Q 013014 271 --DAAINPGNSGGPLLDS-SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLV 324 (451)
Q Consensus 271 --d~~i~~G~SGGPlvd~-~G--~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~ 324 (451)
....+.|+|||||+.. +| .++||+++... ++.....+....+...++||++.+
T Consensus 188 ~~~~~~C~GDSGgPl~~~~~~~~~l~Gi~S~g~~-c~~~~~p~vyt~V~~~~~WI~~~~ 245 (247)
T 3mhw_U 188 QWKTDSCQGDSGGPLVCSLQGRMTLTGIVSWGRG-CALKDKPGVYTRVSHFLPWIRSHT 245 (247)
T ss_dssp TSCCBCCTTCTTCEEEEEETTEEEEEEEEEECSS-SSBTTBCEEEEEGGGCHHHHHHHT
T ss_pred CCCCccCCCCCCCeEEEEECCCEEEEEEEEECCC-CCCCCCCeEEEEHHHHHHHHHHHh
Confidence 2456899999999853 34 59999998642 333334567788888888887754
No 90
>2any_A Kininogenin, plasma kallikrein, light chain, fletcher factor; mutagenically deglycosyalted human plasma kallikrein protease domain; HET: BAM; 1.40A {Homo sapiens} PDB: 2anw_A*
Probab=99.33 E-value=1.2e-10 Score=110.26 Aligned_cols=173 Identities=18% Similarity=0.228 Sum_probs=108.6
Q ss_pred CeEEEEEEEcCCCeEEecccccCCC---CcEEEEeCC---------CcEEEEEEEEEcCC-------CCEEEEEEcCCC-
Q 013014 151 QGSGSGFVWDSKGHVVTNYHVIRGA---SDIRVTFAD---------QSAYDAKIVGFDQD-------KDVAVLRIDAPK- 210 (451)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHVv~~~---~~i~V~~~d---------g~~~~a~vv~~d~~-------~DlAlLkv~~~~- 210 (451)
...|+|.+|+++ +|||+|||+.+. ..+.|.+.. ...+..+-+..|+. +|||||+++.+.
T Consensus 26 ~~~CgGtLI~~~-~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~ 104 (241)
T 2any_A 26 RHLCGGSLIGHQ-WVLTAAHCFDGLPLQDVWRIYSGILELSDITKDTPFSQIKEIIIHQNYKVSEGNHDIALIKLQAPLE 104 (241)
T ss_dssp EEEEEEEEEETT-EEEECGGGGSSCCCSTTEEEECSCSBGGGCCTTSCCBCEEEEEECTTCCTTSSSSCCEEEEESSCCC
T ss_pred ceEEEEEEecCC-EEEECHHHcCCCCCCccEEEEeeeeeccccccCceEEeeEEEEECCCCCCCCCCCCeEEEEeCCccc
Confidence 357999999987 999999999764 456666532 23345555566653 599999998754
Q ss_pred --CCCcceecCCCC-CCCCCcEEEEeeCCCCCC-----CceEEeEEeeeeeeeccCCCC--CCcccEEEE-----cccCC
Q 013014 211 --DKLRPIPIGVSA-DLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISSAATG--RPIQDVIQT-----DAAIN 275 (451)
Q Consensus 211 --~~~~~l~l~~s~-~~~~G~~V~~iG~p~g~~-----~~~~~G~Vs~~~~~~~~~~~~--~~~~~~i~~-----d~~i~ 275 (451)
....|+.|.... ....|+.++++||..... .......+.-+....+..... .....++.. ....+
T Consensus 105 ~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~C 184 (241)
T 2any_A 105 YTEFQKPISLPSKGDTSTIYTNCWVTGWGFSKEKGEIQNILQKVNIPLVTNEECQKRYQDYKITQRMVCAGYKEGGKDAC 184 (241)
T ss_dssp CBTTBCCCCCCCSSCCSTTCSEEEEEESSCSSTTCCCCSBCEEEEEEEECHHHHHTTSCTTCSCTTEEEECCTTCCCBCC
T ss_pred CCCCcceeEcCCcccCCCCCCeEEEEecccCCCCCCcCchhheeEeEEeCHHHhhhHhccCCCCcCcEeecCCCCCCccC
Confidence 235677775432 356799999999875322 122333333222221111100 111334443 23578
Q ss_pred CCCCCCceeCC-Cc--eEEEEEeeeeCCCCCccceeEEEeccCchhhHHHhhh
Q 013014 276 PGNSGGPLLDS-SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (451)
Q Consensus 276 ~G~SGGPlvd~-~G--~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (451)
.|+|||||+.. +| .++||+++... ++.....+....+...++|+++.++
T Consensus 185 ~GDsGgPl~~~~~~~~~l~GI~S~g~~-c~~~~~p~vyt~V~~~~~WI~~~~~ 236 (241)
T 2any_A 185 KGDSGGPLVCKHNGMWRLVGITSWGEG-CARREQPGVYTKVAEYMDWILEKTQ 236 (241)
T ss_dssp TTCTTCEEEEEETTEEEEEEEEEECSS-SSCTTCCEEEEEGGGGHHHHHHHHS
T ss_pred CCCCCCcEEEEECCEEEEEEEEEecCC-CCCCCCCeEEEEHHHhHHHHHHHhh
Confidence 99999999864 44 69999998642 3333345667888888888887664
No 91
>3beu_A Trypsin, SGT; beta sheets, serine protease, hydrolase, zymogen; HET: BEN; 1.05A {Streptomyces griseus} PDB: 3i78_A 3i77_A 2fmj_A 1os8_A 1oss_A 1sgt_A
Probab=99.32 E-value=9.3e-11 Score=109.60 Aligned_cols=169 Identities=15% Similarity=0.174 Sum_probs=105.7
Q ss_pred EEEEEEEcCCCeEEecccccCCC---CcEEEEeCC-------CcEEEEEEEEEcCC-------CCEEEEEEcCCCCCCcc
Q 013014 153 SGSGFVWDSKGHVVTNYHVIRGA---SDIRVTFAD-------QSAYDAKIVGFDQD-------KDVAVLRIDAPKDKLRP 215 (451)
Q Consensus 153 ~GSGfiI~~~G~ILT~aHVv~~~---~~i~V~~~d-------g~~~~a~vv~~d~~-------~DlAlLkv~~~~~~~~~ 215 (451)
.|+|.+|+++ +|||+|||+.+. ..+.|.+.. ...+..+-+..|+. +||||||++.+. .+++
T Consensus 21 ~CgGtLI~~~-~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~v-~~~~ 98 (224)
T 3beu_A 21 GCGGALYAQD-IVLTAAHCVSGSGNNTSITATGGVVDLQSSSAVKVRSTKVLQAPGFTKETYGKDWALIKLAQPI-NQPT 98 (224)
T ss_dssp TEEEEEEETT-EEEECGGGSCSSEEBCCCEEEESCSBTTCTTCEEEEEEEEEECTTCCCGGGSCCCEEEEESSCC-CSCC
T ss_pred ceeEEEeeCC-EEEEChhhcCCCCCcceEEEEeeEeecCCCCceEEEEEEEEeCCCcCCCcCCCCEEEEEeCCCC-CCCc
Confidence 4999999986 999999999864 345666532 24555665666664 499999999764 5778
Q ss_pred eecCCCCCCCCCcEEEEeeCCCCCC-----CceEEeEEeeeeeeecc--CCCCCCcccEEEEc-----ccCCCCCCCCce
Q 013014 216 IPIGVSADLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISS--AATGRPIQDVIQTD-----AAINPGNSGGPL 283 (451)
Q Consensus 216 l~l~~s~~~~~G~~V~~iG~p~g~~-----~~~~~G~Vs~~~~~~~~--~~~~~~~~~~i~~d-----~~i~~G~SGGPl 283 (451)
+.+.... ...+..+.++||..... .......+.-+...... +........++... ...+.|+|||||
T Consensus 99 i~l~~~~-~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl 177 (224)
T 3beu_A 99 LKIATTT-AYNQGTFTVAGWGANREGGSQQRYLLKANVPFVSDAACRSSSSFILVANEMICAGYDTKQEDTCQGDSGGPM 177 (224)
T ss_dssp CEECCSS-TTSSSEEEEEESSCSSTTCCCCSBCEEEEEEEECHHHHHHHCSSCCCGGGEEEECCSSSSCBCCTTCTTCEE
T ss_pred ccccccc-ccCCCEEEEEecCccCCCCcccceeeEeeCcccCHHHhhhhcCCccCCCCeEEeccCCCCCcCCCCcCCCee
Confidence 8886543 33466899999874322 12333333322221111 11011123344332 357899999999
Q ss_pred eCCC--c--eEEEEEeeeeCCCCCccceeEEEeccCchhhHHHhhh
Q 013014 284 LDSS--G--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (451)
Q Consensus 284 vd~~--G--~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (451)
+..+ | .++||+++... ++.....+....+....+|+++.++
T Consensus 178 ~~~~~~~~~~l~Gi~S~g~~-C~~~~~p~vyt~V~~~~~WI~~~~~ 222 (224)
T 3beu_A 178 FRKDNADEWVQVGIVSWGEG-CARKGKYGVYTEVSTFASAIASAAR 222 (224)
T ss_dssp EEECTTSCEEEEEEEEEESS-SSCTTCCEEEEEHHHHHHHHHHHHT
T ss_pred EEecCCCCEEEEEEeccCCC-CCCCCCCeEEEEHHHHHHHHHHHHh
Confidence 8543 3 69999998743 4333345667777777888876543
No 92
>1ym0_A Fibrinotic enzyme component B; two chains, glycosylation, pyroglutamation, eight-membered R peptide bond, hydrolase; HET: NAG MAN FUC; 2.06A {Eisenia fetida}
Probab=99.32 E-value=1.1e-10 Score=110.14 Aligned_cols=172 Identities=20% Similarity=0.209 Sum_probs=108.0
Q ss_pred CeEEEEEEEcCCCeEEecccccCCC--CcEEEEeCC---------CcEEEEEEEEEcC-------CCCEEEEEEcCCC--
Q 013014 151 QGSGSGFVWDSKGHVVTNYHVIRGA--SDIRVTFAD---------QSAYDAKIVGFDQ-------DKDVAVLRIDAPK-- 210 (451)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHVv~~~--~~i~V~~~d---------g~~~~a~vv~~d~-------~~DlAlLkv~~~~-- 210 (451)
...|+|.+|+++ +|||+|||+.+. ..+.|.+.. .+.+..+-+..|+ .+||||||++.+.
T Consensus 25 ~~~CgGtLIs~~-~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~~~~ 103 (238)
T 1ym0_A 25 SHFCGGSIINDR-WVVCAAHCMQGEAPALVSLVVGEHDSSAASTVRQTHDVDSIFVNENYDPATLENDVSVIKTAVAITF 103 (238)
T ss_dssp EEEEEEEEEETT-EEEECHHHHTTCCGGGEEEEESCSBTTSCCSSCEEEEEEEEEECTTCCTTTCTTCCEEEEESSCCCC
T ss_pred ceEEEEEEeeCC-EEEECHHhCCCCCCceEEEEEcccccCCCCCCceEEEEEEEEECCCCCCCCCcccEEEEEeCCCccc
Confidence 357999999987 999999999764 567777642 2455666666665 3599999998764
Q ss_pred -CCCcceecCCCCCCCCCcEEEEeeCCCCCC------CceEEeEEeeeeeeecc--CCCCCCcccEEEEc-------ccC
Q 013014 211 -DKLRPIPIGVSADLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISS--AATGRPIQDVIQTD-------AAI 274 (451)
Q Consensus 211 -~~~~~l~l~~s~~~~~G~~V~~iG~p~g~~------~~~~~G~Vs~~~~~~~~--~~~~~~~~~~i~~d-------~~i 274 (451)
....|+.|........|+.+.++||..... .......+.-+...... +........++... ...
T Consensus 104 ~~~v~picLp~~~~~~~~~~~~~~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~~~ 183 (238)
T 1ym0_A 104 DINVGPICAPDPANDYVYRKSQCSGWGTINSGGVCCPAVLRYVTLNITTNAFCDAVYTSDTIYDDMICATDNTGMTDRDS 183 (238)
T ss_dssp SSSCCCCBCCCTTCCCTTCEEEEEESCCSSTTCCSCCSBCEEEEEEECCHHHHHHHCTTSCCCTTEEEEECSSCSSSCBC
T ss_pred cCcccccCCCCCcCCCCCCceEEEeecCCCCCCCcCCccceEEEEEeeCHHHHhHhhcccccCCCeEEecCCCCCCcCcc
Confidence 235677775443323789999999874322 12233333222221111 11001112344331 467
Q ss_pred CCCCCCCceeCC--Cc--eEEEEEeeeeCCCCCccceeEEEeccCchhhHHHhhh
Q 013014 275 NPGNSGGPLLDS--SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (451)
Q Consensus 275 ~~G~SGGPlvd~--~G--~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (451)
+.|+|||||+.. +| .++||+++... ++ ....+....+....+|+++.++
T Consensus 184 C~GDsGgPL~~~~~~~~~~l~Gi~S~g~~-C~-~~~p~vyt~v~~~~~WI~~~i~ 236 (238)
T 1ym0_A 184 CQGDSGGPLSVKDGSGIFSLVGIVSWGIG-CA-SGYPGVYSRVGFHAGWITDTIT 236 (238)
T ss_dssp CTTTTTCEEEEECTTCCEEEEEEEEECSS-SS-SSSCEEEEEHHHHHHHHHHHHH
T ss_pred CCCccCCeeEEECCCCCEEEEEEEeECCC-CC-CCCCcEEEEHHHhHHHHHHHhc
Confidence 899999999864 34 69999998642 33 3335666777777888877654
No 93
>2hlc_A Collagenase; serine protease, hydrolase, collagen degradation; 1.70A {Hypoderma lineatum} SCOP: b.47.1.2 PDB: 1hyl_A
Probab=99.32 E-value=1e-10 Score=109.91 Aligned_cols=171 Identities=18% Similarity=0.151 Sum_probs=107.2
Q ss_pred CeEEEEEEEcCCCeEEecccccCCCCcEEEEeCCC------cEEEEEEEEEcCC-------CCEEEEEEcCCC---CCCc
Q 013014 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQ------SAYDAKIVGFDQD-------KDVAVLRIDAPK---DKLR 214 (451)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHVv~~~~~i~V~~~dg------~~~~a~vv~~d~~-------~DlAlLkv~~~~---~~~~ 214 (451)
...|+|.+|+++ +|||+|||+.+...+.|.+... ..+..+-+..|+. +|||||+++ +. ....
T Consensus 27 ~~~CgGtLIs~~-~VLTAAHC~~~~~~~~v~~G~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DiALl~L~-~~~~~~~v~ 104 (230)
T 2hlc_A 27 RVWCGGSLIDNK-WILTAAHCVHDAVSVVVYLGSAVQYEGEAVVNSERIISHSMFNPDTYLNDVALIKIP-HVEYTDNIQ 104 (230)
T ss_dssp EEEEEEEEEETT-EEEECHHHHTTEEEEEEEESCSBTTCCSEEEECSEEEECTTCBTTTTBTCCEEEECS-CCCCCSSCC
T ss_pred CEEEEEEEeeCC-EEEECHHHCCCCcceEEEEeeeecCCCCeEEEEEEEEECCCCCCCCccccEEEEEec-CCCcCCcEe
Confidence 357999999987 9999999999877777777432 3444555555543 599999998 43 2466
Q ss_pred ceecCCCC---CCCCCcEEEEeeCCCCCCC--ceEEeEEeeeeeeeccCCCC--CCcccEEEEc----ccCCCCCCCCce
Q 013014 215 PIPIGVSA---DLLVGQKVYAIGNPFGLDH--TLTTGVISGLRREISSAATG--RPIQDVIQTD----AAINPGNSGGPL 283 (451)
Q Consensus 215 ~l~l~~s~---~~~~G~~V~~iG~p~g~~~--~~~~G~Vs~~~~~~~~~~~~--~~~~~~i~~d----~~i~~G~SGGPl 283 (451)
|+.|.... ....|+.+.+.||...... ......+.-+.......... .....++... ...+.|+|||||
T Consensus 105 picLp~~~~~~~~~~~~~~~v~GwG~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~C~GDSGgPl 184 (230)
T 2hlc_A 105 PIRLPSGEELNNKFENIWATVSGWGQSNTDTVILQYTYNLVIDNDRCAQEYPPGIIVESTICGDTSDGKSPCFGDSGGPF 184 (230)
T ss_dssp CCBCCCGGGGGCCCTTCEEEEEESSCCSSCCCBCEEEEEEEECHHHHHTTSCTTSSCTTEEEECCTTSCBCCTTCTTCEE
T ss_pred eeEcCCccccccccCCcEEEEEeeeecCCCCceeEEEEEEEeCHHHhhhhhCCCcccCCeEEecCCCCCCcCCCCCCCee
Confidence 77775433 2457899999998754322 22333332222221111110 1123344332 357889999999
Q ss_pred eCC-CceEEEEEeeeeC-CCCCccceeEEEeccCchhhHHHhh
Q 013014 284 LDS-SGSLIGINTAIYS-PSGASSGVGFSIPVDTVNGIVDQLV 324 (451)
Q Consensus 284 vd~-~G~VVGI~s~~~~-~~~~~~~~~~aIP~~~i~~~l~~l~ 324 (451)
+.. ++.++||+++... .+. ....+....+....+|+++.+
T Consensus 185 ~~~~~~~l~Gi~S~g~~~~C~-~~~p~vyt~V~~~~~WI~~~~ 226 (230)
T 2hlc_A 185 VLSDKNLLIGVVSFVSGAGCE-SGKPVGFSRVTSYMDWIQQNT 226 (230)
T ss_dssp EEGGGTEEEEEEEECCTTCTT-SCCCEEEEEGGGGHHHHHHHH
T ss_pred EECcCCEEEEEEEEeCCCCCC-CCCCCEEEEhHHhHHHHHHhh
Confidence 853 4599999998642 232 233455677788888887754
No 94
>2kl1_A YLBL protein; structure genomics, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; NMR {Geobacillus thermodenitrificans}
Probab=99.32 E-value=3.6e-12 Score=103.48 Aligned_cols=74 Identities=23% Similarity=0.350 Sum_probs=68.0
Q ss_pred cceEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEcCCHHHHHHHHhcCCCCCEEEEEEEECCeEEEEEEEe
Q 013014 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDELLLQGIKQPPVLSDNLRL 429 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i~~~~dl~~~l~~~~~g~~v~l~v~R~g~~~~~~v~l 429 (451)
.|++|.+|.++|||++ ||++ ||+|++|||++|.++.++..++...++|++++++|.|+|+.+++++++
T Consensus 5 ~Gv~V~~V~~~spA~~-GL~~-----------GD~Il~InG~~v~~~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~ 72 (94)
T 2kl1_A 5 KGVYVMSVLPNMPAAG-RLEA-----------GDRIAAIDGQPINTSEQIVSYVREKQAGDRVRVTFIRDRKQHEAELVL 72 (94)
T ss_dssp CCEECCCCCTTSTTBT-TBCT-----------TCEEEEETTBCCCCHHHHHHHHHHSCTTCCEEEEEEETTEEEEEEECC
T ss_pred CcEEEEEECCCChHHh-CCCC-----------CCEEEEECCEECCCHHHHHHHHHhCCCCCEEEEEEEECCEEEEEEEEE
Confidence 6899999999999999 9999 999999999999999999999988778999999999999999999998
Q ss_pred eecCCC
Q 013014 430 LWSEER 435 (451)
Q Consensus 430 ~~~~~~ 435 (451)
......
T Consensus 73 ~~~~~~ 78 (94)
T 2kl1_A 73 KPFPHH 78 (94)
T ss_dssp CBCSSC
T ss_pred eeCCCC
Confidence 766433
No 95
>2olg_A Pro-phenoloxidase activating enzyme-I; prophenoloxidase activating factor-I, PPAF-I, serine proteas hydrolase; HET: NAG; 1.70A {Holotrichia diomphalia}
Probab=99.31 E-value=1.9e-10 Score=111.32 Aligned_cols=171 Identities=18% Similarity=0.225 Sum_probs=104.8
Q ss_pred eEEEEEEEcCCCeEEecccccCCC------CcEEEEeCC--------------------CcEEEEEEEEEcC--------
Q 013014 152 GSGSGFVWDSKGHVVTNYHVIRGA------SDIRVTFAD--------------------QSAYDAKIVGFDQ-------- 197 (451)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHVv~~~------~~i~V~~~d--------------------g~~~~a~vv~~d~-------- 197 (451)
..|.|.+|+++ +|||+|||+.+. ..+.|++.. ...+..+-+..|+
T Consensus 51 ~~CgGsLIs~~-~VLTAAHC~~~~~~~~~~~~~~V~~G~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~ 129 (278)
T 2olg_A 51 FACGGSLINNR-YIVTAAHCVAGRVLRVVGALNKVRLGEWNTATDPDCYGAVRVCVPDKPIDLGIEETIQHPDYVDGSKD 129 (278)
T ss_dssp EEEEEEECSSS-EEEECGGGTSTHHHHHTCEEEEEEESCSBTTCSSCEETTTTEECSSCCEEECEEEEEECTTCCTTCSS
T ss_pred eeEEEEEEeCC-EEEEhHHhCCCcccccccceeEEEeCcccCCCCccccccccccCCCCceEEeeEEEEECCCCcCCCCC
Confidence 47999999976 999999999762 345666532 2334455455553
Q ss_pred -CCCEEEEEEcCCC---CCCcceecCCCC-CCCCCcEEEEeeCCCCCC----CceEEeEEeeeeeeeccCCCC----CCc
Q 013014 198 -DKDVAVLRIDAPK---DKLRPIPIGVSA-DLLVGQKVYAIGNPFGLD----HTLTTGVISGLRREISSAATG----RPI 264 (451)
Q Consensus 198 -~~DlAlLkv~~~~---~~~~~l~l~~s~-~~~~G~~V~~iG~p~g~~----~~~~~G~Vs~~~~~~~~~~~~----~~~ 264 (451)
.+||||||++.+. ....|+.|.... .+..|+.++++||..... .......+.-+.......... ...
T Consensus 130 ~~nDIALl~L~~~v~~~~~v~picLp~~~~~~~~g~~~~v~GWG~t~~~~~~~~l~~~~~~i~~~~~C~~~~~~~~~~~~ 209 (278)
T 2olg_A 130 RYHDIALIRLNRQVEFTNYIRPVCLPQPNEEVQVGQRLTVVGWGRTETGQYSTIKQKLAVPVVHAEQCAKTFGAAGVRVR 209 (278)
T ss_dssp CTTCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESCCSSSCCCCSBCEEEEEEBCCGGGGGGGGSSTTCCCC
T ss_pred CCCeEEEEEECCCCcCCCCcCccCcCCCCCCcCCCCEEEEEcCCcCCCCCccchhhcccccccCHHHHHHHhccccccCC
Confidence 3699999998754 235677775443 367899999999874322 122233333222222211000 111
Q ss_pred ccEEEE----cccCCCCCCCCceeCC--Cc--eEEEEEeeeeCCCCCccceeEEEeccCchhhHHHhh
Q 013014 265 QDVIQT----DAAINPGNSGGPLLDS--SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLV 324 (451)
Q Consensus 265 ~~~i~~----d~~i~~G~SGGPlvd~--~G--~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~ 324 (451)
..++-. ....+.|+|||||+-. +| .++||++++. .++.....+....+....+||++.+
T Consensus 210 ~~~~Ca~~~~~~~~C~GDSGGPL~~~~~~~~~~l~GIvS~g~-~C~~~~~p~vyt~V~~y~~WI~~~i 276 (278)
T 2olg_A 210 SSQLCAGGEKAKDSCGGDSGGPLLAERANQQFFLEGLVSFGA-TCGTEGWPGIYTKVGKYRDWIEGNI 276 (278)
T ss_dssp TTEEEECCTTCTTCCCCCTTCEEEEEEGGGEEEEEEEEEECC-BCSTTCBCEEEEEGGGGHHHHHTTC
T ss_pred CceEeeecCCCCeeCCCccCcceEEEcCCCcEEEEEEEEECC-CCCCCCCCcEEeEHHHHHHHHHHhh
Confidence 234443 2357899999999853 34 6999999863 3443333466777777888876643
No 96
>2vz5_A TAX1-binding protein 3; WNT signaling pathway, protein binding, nucleus, cytoplasm, PDZ domain; 1.74A {Homo sapiens} PDB: 3dj1_A 3diw_A 2l4s_A 2l4t_A 3gj9_A 2kg2_A 3dj3_A
Probab=99.30 E-value=2.5e-12 Score=112.18 Aligned_cols=97 Identities=24% Similarity=0.311 Sum_probs=74.4
Q ss_pred Hhhhccccccccccceecc---ch-hhhhhC----ccceEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEc
Q 013014 322 QLVKFGKVTRPILGIKFAP---DQ-SVEQLG----VSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKV 393 (451)
Q Consensus 322 ~l~~~g~~~~~~lGi~~~~---~~-~~~~~~----~~Gv~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i 393 (451)
+|.+.+++.+++||+.+.. .. ..+.++ ..|++|.+|.+++||+++||++ ||+|++|||++|
T Consensus 28 ~l~~~~~~~~~~lG~~i~~g~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGL~~-----------GD~I~~vng~~v 96 (139)
T 2vz5_A 28 EIHKLRQGENLILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAGLQI-----------GDKIMQVNGWDM 96 (139)
T ss_dssp EEECEEETTEEECSEEEEECTTSCGGGCSSCSSTTCCCEEEEEECTTSHHHHHTCCT-----------TCEEEEETTEEC
T ss_pred EEEEcCCCCcccccEEEEccccCChhhhhhcccCCCCCEEEEEECCCCHHHHCCCCC-----------CCEEEEECCEEc
Confidence 3456788889999998753 11 122333 2799999999999999999999 999999999999
Q ss_pred C--CHHHHHHHHhcCCCCCEEEEEEEECCeEEEEEEEee
Q 013014 394 S--NGSDLYRILDQCKVGDELLLQGIKQPPVLSDNLRLL 430 (451)
Q Consensus 394 ~--~~~dl~~~l~~~~~g~~v~l~v~R~g~~~~~~v~l~ 430 (451)
. ++.++.+++.. .+|++++++|.|+|+..++++++.
T Consensus 97 ~~~~~~~~~~~l~~-~~g~~v~l~v~R~g~~~~v~~~~~ 134 (139)
T 2vz5_A 97 TMVTHDQARKRLTK-RSEEVVRLLVTRQSLQKAVQQSML 134 (139)
T ss_dssp TTCCHHHHHHHHCC-TTCSEEEEEEEECC-------CCC
T ss_pred CCCCHHHHHHHHHh-CCCCEEEEEEEECCEEEEEEEeec
Confidence 9 58999999987 689999999999999888887764
No 97
>3gyl_B Prostasin; ENAC, zymogen, divalent cation, channel activatin membrane, disulfide bond, glycoprotein, hydrolase, membrane protease, secreted; 1.30A {Homo sapiens} PDB: 3gym_A 3e16_B* 3e0p_B* 3e0n_B* 3e1x_B 3fvf_B* 3dfj_A 3dfl_A*
Probab=99.30 E-value=1.3e-10 Score=111.12 Aligned_cols=174 Identities=19% Similarity=0.198 Sum_probs=109.3
Q ss_pred CeEEEEEEEcCCCeEEecccccCC---CCcEEEEeCC---------CcEEEEEEEEEcCC-------CCEEEEEEcCCC-
Q 013014 151 QGSGSGFVWDSKGHVVTNYHVIRG---ASDIRVTFAD---------QSAYDAKIVGFDQD-------KDVAVLRIDAPK- 210 (451)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHVv~~---~~~i~V~~~d---------g~~~~a~vv~~d~~-------~DlAlLkv~~~~- 210 (451)
...|+|.+|+++ +|||+|||+.+ ...+.|.+.. .+.+..+-+..|+. +||||||++.+.
T Consensus 23 ~~~CgGtLI~~~-~VLTAAhC~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~v~ 101 (261)
T 3gyl_B 23 VHVCGGSLVSEQ-WVLSAAHCFPSEHHKEAYEVKLGAHQLDSYSEDAKVSTLKDIIPHPSYLQEGSQGDIALLQLSRPIT 101 (261)
T ss_dssp EEEEEEEECSSS-EEEECGGGSCTTSCGGGEEEEESCSBTTSCCSSCEEECEEEEEECTTCCSTTCSCCCEEEEESSCCC
T ss_pred ceEEEEEEEcCC-EEEECHHHCCCCCCcccEEEEeCceeccCCCCCceEEEEEEEEECCCcCCCCCCCcEEEEEECCCcc
Confidence 357999999986 99999999953 3456777642 23455666666664 499999998754
Q ss_pred --CCCcceecCCC-CCCCCCcEEEEeeCCCCCC-------CceEEeEEeeeeeeecc--CC-------CCCCcccEEEEc
Q 013014 211 --DKLRPIPIGVS-ADLLVGQKVYAIGNPFGLD-------HTLTTGVISGLRREISS--AA-------TGRPIQDVIQTD 271 (451)
Q Consensus 211 --~~~~~l~l~~s-~~~~~G~~V~~iG~p~g~~-------~~~~~G~Vs~~~~~~~~--~~-------~~~~~~~~i~~d 271 (451)
....|+.|... ..+..|+.+++.||..... .......+.-+....+. +. .......++...
T Consensus 102 ~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~Ca~ 181 (261)
T 3gyl_B 102 FSRYIRPISLPAAQASFPNGLHCTVTGWGHVAPSVSLLTPKPLQQLEVPLISRETCNSLYNIDAKPEEPHFVQEDMVCAG 181 (261)
T ss_dssp CBTTBCCCBCCCTTCCCCTTCEEEEEESSCSBTTBCCCTTCBCEEEEEEEECHHHHHHHHTTTCCTTCCCCCCTTEEEES
T ss_pred CCCceeccCCCCcccCCCCCCEEEEEecCCCCCCCCccCCccceEEEEEEECHHHhhhhhcccccccccccccCCeEeeC
Confidence 23567777433 3356899999999874321 12223333222221111 00 001113344432
Q ss_pred -----ccCCCCCCCCceeCC-Cc--eEEEEEeeeeCCCCCccceeEEEeccCchhhHHHhhhc
Q 013014 272 -----AAINPGNSGGPLLDS-SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKF 326 (451)
Q Consensus 272 -----~~i~~G~SGGPlvd~-~G--~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~~ 326 (451)
...+.|+|||||+.. +| .++||+++.. .++.....+....+...++||++.++.
T Consensus 182 ~~~~~~~~C~GDsGgPl~~~~~~~~~lvGI~S~g~-~c~~~~~p~vyt~v~~~~~WI~~~i~~ 243 (261)
T 3gyl_B 182 YVEGGKDACQGDSGGPLSCPVEGLWYLTGIVSWGD-ACGARNRPGVYTLASSYASWIQSKVTE 243 (261)
T ss_dssp CSSSSCBCCTTTTTCEEEEEETTEEEEEEEECCCC-CSSCTTCCEEEEEGGGGHHHHHHHHHH
T ss_pred CCCCCCccCCCCCCCeeEEEeCCEEEEEEEEecCC-CCCCCCCCCEEEEHHHhHHHHHHHHhh
Confidence 357899999999864 45 5999999863 333334456778888888888886653
No 98
>1rtf_B (TC)-T-PA, two chain tissue plasminogen activator; serine protease, fibrinolytic enzymes; HET: BEN; 2.30A {Homo sapiens} SCOP: b.47.1.2 PDB: 1a5h_A* 1bda_A* 1a5i_A*
Probab=99.30 E-value=3.4e-10 Score=107.69 Aligned_cols=172 Identities=14% Similarity=0.184 Sum_probs=108.2
Q ss_pred CeEEEEEEEcCCCeEEecccccCCC---CcEEEEeCC---------CcEEEEEEEEEcCC-------CCEEEEEEcCC--
Q 013014 151 QGSGSGFVWDSKGHVVTNYHVIRGA---SDIRVTFAD---------QSAYDAKIVGFDQD-------KDVAVLRIDAP-- 209 (451)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHVv~~~---~~i~V~~~d---------g~~~~a~vv~~d~~-------~DlAlLkv~~~-- 209 (451)
...|+|.+|+++ +|||+|||+.+. ..+.|.+.. .+.+..+-+..|+. +|||||+++.+
T Consensus 29 ~~~CgGtLI~~~-~VLTAAHC~~~~~~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~~~ 107 (252)
T 1rtf_B 29 RFLCGGILISSC-WILSAAHCFQERFPPHHLTVILGRTYRVVPGEEEQKFEVEKYIVHKEFDDDTYDNDIALLQLKSDSS 107 (252)
T ss_dssp EEEEEEEECSSS-EEEECGGGGTTCCCGGGEEEEESCSBSSSCCTTCEEEEEEEEEECTTCCTTTCTTCCEEEEECCSSS
T ss_pred CEEEEEEEEeCC-EEEECHHHCCCCCCcccEEEEeCcccccCCCCcceEEEEEEEEeCCCCCcCCCCCCEEEEEECCccc
Confidence 357999999986 999999999753 457777632 24566666666653 59999999875
Q ss_pred --C---CCCcceecCCCC-CCCCCcEEEEeeCCCCCC------CceEEeEEeeeeeeeccCCC---CCCcccEEEEc---
Q 013014 210 --K---DKLRPIPIGVSA-DLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISSAAT---GRPIQDVIQTD--- 271 (451)
Q Consensus 210 --~---~~~~~l~l~~s~-~~~~G~~V~~iG~p~g~~------~~~~~G~Vs~~~~~~~~~~~---~~~~~~~i~~d--- 271 (451)
. ....|+.|.... .+..|+.+.+.||..... .......+.-+....+.... ......++...
T Consensus 108 ~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~ 187 (252)
T 1rtf_B 108 RCAQESSVVRTVCLPPADLQLPDWTECELSGYGKHEALSPFYSERLKEAHVRLYPSSRCTSQHLLNRTVTDNMLCAGDTR 187 (252)
T ss_dssp CCSCCBTTBCCCBCCCTTCCCCTTCEEEEEESCCSSTTCSSCCSBCEEEEEEECCGGGSSTTTTTTCCCCTTEEEEECCC
T ss_pred cccccCCceeceeCCCccccCCCCCEEEEEEcCCCCCCCccccchheEeeeEEecHHHhhhhhccCCCCCCCEEEecCCC
Confidence 2 235677775432 356789999999874322 12333333333222221110 01112344331
Q ss_pred --------ccCCCCCCCCceeCC-Cc--eEEEEEeeeeCCCCCccceeEEEeccCchhhHHHhh
Q 013014 272 --------AAINPGNSGGPLLDS-SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLV 324 (451)
Q Consensus 272 --------~~i~~G~SGGPlvd~-~G--~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~ 324 (451)
...+.|+|||||+-. +| .++||+++... ++.....+....+...++||++.+
T Consensus 188 ~~~~~~~~~~~C~GDsGgPL~~~~~~~~~l~Gi~S~g~~-C~~~~~p~vyt~V~~y~~WI~~~~ 250 (252)
T 1rtf_B 188 SGGPQANLHDACQGDSGGPLVCLNDGRMTLVGIISWGLG-CGQKDVPGVYTKVTNYLDWIRDNM 250 (252)
T ss_dssp ------CCCBCCTTCTTCEEEEEETTEEEEEEEEEECSS-SSCTTCCEEEEEGGGGHHHHHHHC
T ss_pred CCCccCCCCccccCCCcCceEEEeCCcEEEEEEEEEcCC-CCCCCCCeEEEEHHHHHHHHHHhc
Confidence 457899999999853 45 69999998643 333333566778888888887654
No 99
>3h7o_A Group 3 allergen smipp-S YV6023A04; hydrolase; 1.85A {Sarcoptes scabiei type hominis} SCOP: b.47.1.0
Probab=99.30 E-value=5.1e-11 Score=111.50 Aligned_cols=169 Identities=15% Similarity=0.223 Sum_probs=105.5
Q ss_pred EEEEEEEcCCCeEEecccccCC--CCcEEEEeCC--------CcEEEEEEEEEc------CCCCEEEEEEcCCCC----C
Q 013014 153 SGSGFVWDSKGHVVTNYHVIRG--ASDIRVTFAD--------QSAYDAKIVGFD------QDKDVAVLRIDAPKD----K 212 (451)
Q Consensus 153 ~GSGfiI~~~G~ILT~aHVv~~--~~~i~V~~~d--------g~~~~a~vv~~d------~~~DlAlLkv~~~~~----~ 212 (451)
.|+|.+|+++ +|||+|||+.+ ...+.|.+.. +..+..+.+..+ ..+|||||+++.+.. .
T Consensus 27 ~CgGtLI~~~-~VLTAAHC~~~~~~~~~~v~~g~~~~~~~~~~~~~~v~~i~~h~y~~~~~~~DIALl~L~~~v~~~~~~ 105 (228)
T 3h7o_A 27 TCGGAILSQW-FVLTAAHCVFDQKPETIVIQYESTNLWEDPGKSDPYVSHVYLSFYRQETMENDIAILELSRPLKLDGLK 105 (228)
T ss_dssp EEEEEESSSS-EEEECHHHHTTSCGGGCEEEESCSBTTTBCCEEECCEEEEEESSCBTTTTBTCCEEEEESSCCCCCSSS
T ss_pred EeeeEEeeCC-EEEEcHHhcccCCCCcEEEEecccccccCCCceeeeEEEEEccccCCCCccCCEEEEEECCcccccccc
Confidence 7999999986 99999999954 3456666532 122333333333 236999999987642 4
Q ss_pred CcceecCCCC-CCCCCcEEEEeeCCCCCCC-----ceEEeEEeeeeeeecc--CCCCCCcccEEEE---cccCCCCCCCC
Q 013014 213 LRPIPIGVSA-DLLVGQKVYAIGNPFGLDH-----TLTTGVISGLRREISS--AATGRPIQDVIQT---DAAINPGNSGG 281 (451)
Q Consensus 213 ~~~l~l~~s~-~~~~G~~V~~iG~p~g~~~-----~~~~G~Vs~~~~~~~~--~~~~~~~~~~i~~---d~~i~~G~SGG 281 (451)
..|+.|.... .+..|+.+++.||...... ......+.-+...... +........++.. +...+.|+|||
T Consensus 106 v~pi~lp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~C~GDsGg 185 (228)
T 3h7o_A 106 SKPAKLPDIEFRPKTGSDVLVSGYGDGQTMDPKDHDLKSAQLTVVDLDECRTKYGPIFLSLQVFCAQKVGVSLESGDAGD 185 (228)
T ss_dssp SCCCBCCCTTCCCCTTCEEEEEECCCSSCSCGGGGBCEEEEEEEECHHHHHHHHTTSCCCSSEEEEECTTCCCCGGGTTC
T ss_pred cccccCCccccCCCCCCeeEEEEEecCCCCCCcccccccceeEEEcHHHHHHHhcCccCCceEEecCCCCCcCCCCCCCC
Confidence 5677775443 2678999999998754321 2333333322222111 0000111233332 24568899999
Q ss_pred ceeCCCceEEEEEeeeeCCCCCccceeEEEeccCchhhHHHhhh
Q 013014 282 PLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (451)
Q Consensus 282 Plvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (451)
||+. +++++||+++... ++. ...+....+...++||++.++
T Consensus 186 Pl~~-~~~l~Gi~S~g~~-c~~-~~p~vyt~v~~~~~WI~~~i~ 226 (228)
T 3h7o_A 186 PTVQ-QDTLVGVAAYFPK-RPE-GAPEVFTKVGSYVSWIQDIIK 226 (228)
T ss_dssp EEEE-TTEEEEEECCCTT-CCT-TCCEEEEEGGGTHHHHHHHHT
T ss_pred ccee-cCeEEEEEeecCc-CCC-CCCcEEEEHHHHHHHHHHHhh
Confidence 9996 7789999998643 332 345677888888888888665
No 100
>1yc0_A Hepatocyte growth factor activator; hydrolase/inhibitor, hydrolase-inhibitor complex; 2.60A {Homo sapiens} PDB: 1ybw_A 2r0k_A
Probab=99.30 E-value=2e-10 Score=111.52 Aligned_cols=173 Identities=17% Similarity=0.222 Sum_probs=110.2
Q ss_pred CeEEEEEEEcCCCeEEecccccCCC---CcEEEEeCC---------CcEEEEEEEEEcC--------CCCEEEEEEcCC-
Q 013014 151 QGSGSGFVWDSKGHVVTNYHVIRGA---SDIRVTFAD---------QSAYDAKIVGFDQ--------DKDVAVLRIDAP- 209 (451)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHVv~~~---~~i~V~~~d---------g~~~~a~vv~~d~--------~~DlAlLkv~~~- 209 (451)
...|+|.+|+++ +|||+|||+.+. ..+.|.+.. .+.+..+-+..|+ .+|||||+++.+
T Consensus 57 ~~~CgGsLIs~~-~VLTAAHC~~~~~~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~DIALl~L~~~~ 135 (283)
T 1yc0_A 57 DSFCAGSLVHTC-WVVSAAHCFSHSPPRDSVSVVLGQHFFNRTTDVTQTFGIEKYIPYTLYSVFNPSDHDLVLIRLKKKG 135 (283)
T ss_dssp TEEEEEEEEETT-EEEECGGGGTTCCCGGGEEEEESCCBTTCCCSSCEEECEEEEEECTTCCTTSTTTTCCEEEEECCBT
T ss_pred CcEEEEEEeeCC-EEEECHHHcCCCCCCceEEEEEeeeecccCCCceEEEeeEEEEecCccccCCCCCCceEEEEeCCCc
Confidence 357999999987 999999999764 467777642 2344555555443 359999999865
Q ss_pred ---C---CCCcceecCCC-CCCCCCcEEEEeeCCCCCC------CceEEeEEeeeeeeeccCC--CC-CCcccEEEEc--
Q 013014 210 ---K---DKLRPIPIGVS-ADLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISSAA--TG-RPIQDVIQTD-- 271 (451)
Q Consensus 210 ---~---~~~~~l~l~~s-~~~~~G~~V~~iG~p~g~~------~~~~~G~Vs~~~~~~~~~~--~~-~~~~~~i~~d-- 271 (451)
. ....|+.|... ..+..|+.+++.||..... .......+.-+........ .+ .....++...
T Consensus 136 ~~~v~~~~~v~picLp~~~~~~~~g~~~~v~GwG~~~~~~~~~~~~L~~~~v~i~~~~~C~~~~~~~~~~~~~~iCa~~~ 215 (283)
T 1yc0_A 136 DRCATRSQFVQPICLPEPGSTFPAGHKCQIAGWGHLDENVSGYSSSLREALVPLVADHKCSSPEVYGADISPNMLCAGYF 215 (283)
T ss_dssp TBSSCCBTTBCCCBCCCTTCCCCTTCEEEEEESSCSBTTBCSCCSBCEEEEEEBCCHHHHTSTTTTGGGCCTTEEEESCS
T ss_pred cccccccCceeeeECCCCcCCCCCCCEEEEEEeCccCCCCCccCchheEeEEEEECHHHhcCccccCCcCCCCEEeeCCC
Confidence 1 23567777543 3456899999999874321 2233344433332222110 00 0112344432
Q ss_pred ---ccCCCCCCCCceeCC-Cc--eEEEEEeeeeCCCCCccceeEEEeccCchhhHHHhhh
Q 013014 272 ---AAINPGNSGGPLLDS-SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (451)
Q Consensus 272 ---~~i~~G~SGGPlvd~-~G--~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (451)
...+.|+|||||+.. +| .++||++++.. ++.....+....+....+||++.++
T Consensus 216 ~~~~~~C~GDSGgPL~~~~~g~~~l~GIvS~g~~-C~~~~~p~vyt~V~~y~~WI~~~i~ 274 (283)
T 1yc0_A 216 DCKSDACQGDSGGPLACEKNGVAYLYGIISWGDG-CGRLHKPGVYTRVANYVDWINDRIR 274 (283)
T ss_dssp SSCCBCCTTCTTCEEEEEETTEEEEEEEEEECST-TTCTTCCEEEEEGGGGHHHHHHHCC
T ss_pred CCCCccCCCCCCCceEEEECCcEEEEEEEEECCC-CCCCCCCeEEEEhhhHHHHHHHHhc
Confidence 357899999999864 45 59999998643 4433445677888888888887665
No 101
>2jkh_A Activated factor XA heavy chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_A* 2vvc_A* 2vvu_A* 2vvv_A* 2vwl_A* 2vwm_A* 2vwn_A* 2vwo_A* 2xbv_A* 1c5m_D 2vh0_A* 1ezq_A* 1f0s_A* 1ksn_A* 1f0r_A* 1lpk_B* 1lpz_B* 1lqd_B* 1nfu_A* 1nfw_A* ...
Probab=99.29 E-value=6.7e-11 Score=111.99 Aligned_cols=174 Identities=18% Similarity=0.197 Sum_probs=110.0
Q ss_pred CeEEEEEEEcCCCeEEecccccCCCCcEEEEeCC---------CcEEEEEEEEEcCC-------CCEEEEEEcCCC---C
Q 013014 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD---------QSAYDAKIVGFDQD-------KDVAVLRIDAPK---D 211 (451)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHVv~~~~~i~V~~~d---------g~~~~a~vv~~d~~-------~DlAlLkv~~~~---~ 211 (451)
...|+|.+|+++ +|||+|||+.+...+.|++.+ .+.+..+.+..|+. +|||||+++.+. .
T Consensus 24 ~~~CgGtLIs~~-~VLTAAhC~~~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~~~~ 102 (241)
T 2jkh_A 24 EGFCGGTILSEF-YILTAAHCLYQAKRFKVRVGDRNTEQEEGGEAVHEVEVVIKHNRFTKETYDFDIAVLRLKTPITFRM 102 (241)
T ss_dssp CEEEEEEECSSS-EEEECGGGGGSCSSCEEEESCSBTTCCCSCCEEECEEEEEECTTCBTTTTBTCCEEEEESSCCCCBT
T ss_pred CcEEEEEEeeCC-EEEEcHHHcCCCCcEEEEECCccCCCCCCCcEEEEeEEEEeCCCCCCCCCCCcEEEEEECCcccCCC
Confidence 457999999986 999999999887777787742 23455666666653 599999998764 2
Q ss_pred CCcceecCCCC----CCCCCcEEEEeeCCCCCC-----CceEEeEEeeeeeeeccCC-CCCCcccEEEE-----cccCCC
Q 013014 212 KLRPIPIGVSA----DLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISSAA-TGRPIQDVIQT-----DAAINP 276 (451)
Q Consensus 212 ~~~~l~l~~s~----~~~~G~~V~~iG~p~g~~-----~~~~~G~Vs~~~~~~~~~~-~~~~~~~~i~~-----d~~i~~ 276 (451)
...|+.|.... .+..|+.+++.||..... .......+.-+........ .......++.. ....+.
T Consensus 103 ~v~picLp~~~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~ 182 (241)
T 2jkh_A 103 NVAPACLPERDWAESTLMTQKTGIVSGFGRTHEKGEQSTRLKMLEVPYVDRNSCKLSSSFIITQNMFCAGYDTKQEDACQ 182 (241)
T ss_dssp TBCCCBCCCHHHHHHHTTTSSEEEEEESCBSSTTSCBCSBCEEEEEEEECHHHHHHHCSSCCCTTEEEESCSSSSCBCCT
T ss_pred CEeeeEcCCCCcccccccCCCeEEEEecCCCCCCCCcCccccEeeeccccHHHhcccccCcCCCCeEEeeCCCCCCccCc
Confidence 35677774322 145689999999864321 1223333332222111100 00111234433 235789
Q ss_pred CCCCCceeCC-Cc--eEEEEEeeeeCCCCCccceeEEEeccCchhhHHHhhhc
Q 013014 277 GNSGGPLLDS-SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKF 326 (451)
Q Consensus 277 G~SGGPlvd~-~G--~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~~ 326 (451)
|+|||||+.. +| .++||+++... ++.....+....+....+||++.++.
T Consensus 183 GDsGgPl~~~~~~~~~l~GI~S~g~~-C~~~~~p~vyt~V~~~~~WI~~~~~~ 234 (241)
T 2jkh_A 183 GDSGGPHVTRFKDTYFVTGIVSWGEG-CARKGKYGIYTKVTAFLKWIDRSMKT 234 (241)
T ss_dssp TTTTCEEEEEETTEEEEEEEEEECSS-SSCTTCCEEEEEGGGGHHHHHHHTC-
T ss_pred CcCCCeeEEEECCEEEEEEEEEECCC-CCCCCCceEEEEhHHHHHHHHHHhcc
Confidence 9999999964 44 59999998643 33333456778888888998886653
No 102
>2f91_A Hepatopancreas trypsin; trypsin, canonical inhibitor, atomic resolution, hydrolase/hydrolase inhibitor complex; 1.20A {Pontastacus leptodactylus} SCOP: b.47.1.2
Probab=99.29 E-value=2e-10 Score=108.51 Aligned_cols=168 Identities=16% Similarity=0.214 Sum_probs=105.9
Q ss_pred EEEEEEEcCCCeEEecccccCCC-----CcEEEEeCC-------C--cEEEEEEEEEcCC-------CCEEEEEEcCCC-
Q 013014 153 SGSGFVWDSKGHVVTNYHVIRGA-----SDIRVTFAD-------Q--SAYDAKIVGFDQD-------KDVAVLRIDAPK- 210 (451)
Q Consensus 153 ~GSGfiI~~~G~ILT~aHVv~~~-----~~i~V~~~d-------g--~~~~a~vv~~d~~-------~DlAlLkv~~~~- 210 (451)
.|+|.+|+++ +|||+|||+.+. ..+.|.+.. + +.+..+-+..|+. +||||||++.+.
T Consensus 29 ~CgGtLIs~~-~VLTAAHC~~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~ 107 (237)
T 2f91_A 29 FCGASIYNEN-YAITAGHCVYGDDYENPSGLQIVAGELDMSVNEGSEQIITVSKIILHENFDYNLLDNDISLLKLSGSLT 107 (237)
T ss_dssp EEEEEEEETT-EEEECGGGTTTSCTTSCCSEEEEESCSBTTSCCSCCEEEEEEEEEECTTCCTTTCTTCCEEEEESSCCC
T ss_pred eEEEEEeeCC-EEEEcHHhCCCCccCCcccEEEEECCeeccCCCCccEEEEEEEEEECCCCCCCCCCCcEEEEEECCCcc
Confidence 4999999987 999999999753 457777632 2 4566666666653 599999998764
Q ss_pred --CCCcceecCCCCCCCCCcEEEEeeCCCCCC-----CceEEeEEeeeeeeecc--CCCCCCcccEEEE-----cccCCC
Q 013014 211 --DKLRPIPIGVSADLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISS--AATGRPIQDVIQT-----DAAINP 276 (451)
Q Consensus 211 --~~~~~l~l~~s~~~~~G~~V~~iG~p~g~~-----~~~~~G~Vs~~~~~~~~--~~~~~~~~~~i~~-----d~~i~~ 276 (451)
....|+.|.... ...++.++++||..... .......+.-+...... +........++.. ....+.
T Consensus 108 ~~~~v~picLp~~~-~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~ 186 (237)
T 2f91_A 108 FNDNVAPIALPEQG-HTATGDVIVTGWGTTSEGGNTPDVLQKVTVPLVSDEDCRADYGADEILDSMICAGVPEGGKDSCQ 186 (237)
T ss_dssp CBTTBCCCBCCCTT-CCCCSEEEEEESCCSSTTCCCCSBCEEEEEEEECHHHHHHHHCTTTSCTTEEEECCTTCCCBCCT
T ss_pred cCCceeeccCCCCC-CCCCCcEEEEECCcCCCCCCccceeeEEEEeEcCHHHhhhhhCCCCcCCCeEEEecCCCCCCCCC
Confidence 246777776443 46789999999874321 12233333322221111 1001111334443 235789
Q ss_pred CCCCCceeCCCc---eEEEEEeeeeCCCCCccceeEEEeccCchhhHHHh
Q 013014 277 GNSGGPLLDSSG---SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQL 323 (451)
Q Consensus 277 G~SGGPlvd~~G---~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l 323 (451)
|+|||||+..++ .++||+++... ++.....+....+...++|+++.
T Consensus 187 GDSGgPL~~~~~~~~~l~Gi~S~g~~-C~~~~~p~vyt~V~~~~~WI~~~ 235 (237)
T 2f91_A 187 GDSGGPLAASDTGSTYLAGIVSWGYG-CARPGYPGVYTEVSYHVDWIKAN 235 (237)
T ss_dssp TCTTCEEEECTTSSCEEEEEEEEESS-SSCTTCCEEEEEGGGSHHHHHHH
T ss_pred CcCCCCeEEecCCCEEEEEEEEecCC-CCCCCCCcEEEEHHHhHHHHHHh
Confidence 999999996432 79999998643 33333346677777788887763
No 103
>2jde_A Urokinase-type plasminogen activator; plasminogen activation, EGF-like domain, blood coagulation, inhibitor complex, UPA, kringle, zymogen; 2.2A {Homo sapiens} PDB: 2vnt_A*
Probab=99.29 E-value=2.6e-10 Score=110.03 Aligned_cols=172 Identities=17% Similarity=0.197 Sum_probs=108.2
Q ss_pred eEEEEEEEcCCCeEEecccccCCC---CcEEEEeCC---------CcEEEEEEEEEcCC---------CCEEEEEEcCC-
Q 013014 152 GSGSGFVWDSKGHVVTNYHVIRGA---SDIRVTFAD---------QSAYDAKIVGFDQD---------KDVAVLRIDAP- 209 (451)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHVv~~~---~~i~V~~~d---------g~~~~a~vv~~d~~---------~DlAlLkv~~~- 209 (451)
..|+|.+|+++ +|||+|||+.+. ..+.|.+.. +..+..+-+..|+. +|||||+++.+
T Consensus 52 ~~CgGtLI~~~-~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~~DIALl~L~~~~ 130 (276)
T 2jde_A 52 YVCGGSLMSPC-WVISATHCFIDYPKKEDYIVYLGRSRLNSNTQGEMKFEVENLILHKDYSADTLAHHNDIALLKIRSKE 130 (276)
T ss_dssp EEEEEEEEETT-EEEECGGGTTTSCCGGGEEEEESCCBSSSCCTTCEEEEEEEEEECTTCEECSSCEESCCEEEEEECTT
T ss_pred eeeeeEEeeCC-EEEEcHHhccCCCCcccEEEEecccccCCCCCCcEEEEEEEEEECCCCCCCCCcCCCcEEEEEeCCcc
Confidence 47999999987 999999999653 356676632 23466666666653 49999999865
Q ss_pred ---C---CCCcceecCCC-CCCCCCcEEEEeeCCCCCC------CceEEeEEeeeeeeeccCC--C-CCCcccEEEE---
Q 013014 210 ---K---DKLRPIPIGVS-ADLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISSAA--T-GRPIQDVIQT--- 270 (451)
Q Consensus 210 ---~---~~~~~l~l~~s-~~~~~G~~V~~iG~p~g~~------~~~~~G~Vs~~~~~~~~~~--~-~~~~~~~i~~--- 270 (451)
. ....|+.|... ..+..|+.+++.||..... .......+.-+........ . ......++..
T Consensus 131 ~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~ 210 (276)
T 2jde_A 131 GRCAQPSRTIQTICLPSMYNDPQFGTSCEITGFGKENSTDYLYPEQLKMTVVKLISHRECQQPHYYGSEVTTKMLCAADP 210 (276)
T ss_dssp SCCCCCBTTBCCCBCCBTTBCCCTTCEEEEEESCCSSTTCSCCCSBCEEEEEEEECHHHHTSTTTTGGGSCTTEEEEECT
T ss_pred ccccccCCceEccCCCCcccCCCCCCEEEEEECCccCCCCcccchhhhhceecccChHHhCcccccCccCCCCeEEecCC
Confidence 1 34567777543 3467899999999875422 1233333332222222110 0 0111234433
Q ss_pred --cccCCCCCCCCceeCC-Cc--eEEEEEeeeeCCCCCccceeEEEeccCchhhHHHhhh
Q 013014 271 --DAAINPGNSGGPLLDS-SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (451)
Q Consensus 271 --d~~i~~G~SGGPlvd~-~G--~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (451)
....+.|+|||||+.. +| .++||+++... ++.....+....+....+||++.++
T Consensus 211 ~~~~~~C~GDSGgPL~~~~~~~~~l~GI~S~g~~-C~~~~~p~vyt~V~~y~~WI~~~~~ 269 (276)
T 2jde_A 211 QWKTDSCQGDSGGPLVCSLQGRMTLTGIVSWGRG-CALKDKPGVYTRVSHFLPWIRSHTK 269 (276)
T ss_dssp TSCCBCCTTCTTCEEEEEETTEEEEEEEEEECSS-SSCTTCCEEEEEGGGGHHHHHHTC-
T ss_pred CCCCcccccccCcceEEEeCCcEEEEEEEEECCC-CCCCCCCeEEEEHHHHHHHHHHHhh
Confidence 2457899999999953 34 49999998643 3333345677888888888887554
No 104
>1t8o_A Chymotrypsin A; chymotrypsin, serine proteinase, BPTI, protein-protein interaction, non-cognate binding, S1 pocket, primary specificity; 1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1cgi_E 1cgj_E 1chg_A 1ex3_A 1acb_E 1gl0_E 1gl1_A 1gcd_A* 1oxg_A 1k2i_1 1p2n_A 1p2o_A 1p2q_A 1t7c_A 1t8l_A 1t8m_A 1t8n_A 1p2m_A 2cga_A 2y6t_A ...
Probab=99.29 E-value=1.7e-10 Score=109.65 Aligned_cols=172 Identities=18% Similarity=0.177 Sum_probs=106.2
Q ss_pred CeEEEEEEEcCCCeEEecccccCCCCcEEEEeC---------CCcEEEEEEEEEcCC-------CCEEEEEEcCCC---C
Q 013014 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFA---------DQSAYDAKIVGFDQD-------KDVAVLRIDAPK---D 211 (451)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHVv~~~~~i~V~~~---------dg~~~~a~vv~~d~~-------~DlAlLkv~~~~---~ 211 (451)
...|+|.+|+++ +|||+|||+.+. ...|.+. ..+.+..+-+..|+. +||||||++.+. .
T Consensus 39 ~~~CgGtLI~~~-~VLTAAHC~~~~-~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~~~~~~ 116 (245)
T 1t8o_A 39 FHFCGGSLINEN-WVVTAAHCGVTT-SDVVVAGEFDQGSSSEKIQKLKIAKVFKNSKYNSLTINNDITLLKLSTAASFSQ 116 (245)
T ss_dssp CEEEEEEEEETT-EEEECGGGCCCT-TSEEEESCSBTTCSSSCCEEEEEEEEEECTTCCTTTCCSCCEEEEESSCCCCBT
T ss_pred CeEEEEEEeeCC-EEEEcHHhCcCC-CcEEEEeeeecCCCCCCcEEEEEEEEEeCCCCCCCCCCCCEEEEEECCCCcCCC
Confidence 357999999987 999999999763 3445442 123455665566643 599999998764 2
Q ss_pred CCcceecCCC-CCCCCCcEEEEeeCCCCCC------CceEEeEEeeeeeeeccCC-CCCCcccEEEE---cccCCCCCCC
Q 013014 212 KLRPIPIGVS-ADLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISSAA-TGRPIQDVIQT---DAAINPGNSG 280 (451)
Q Consensus 212 ~~~~l~l~~s-~~~~~G~~V~~iG~p~g~~------~~~~~G~Vs~~~~~~~~~~-~~~~~~~~i~~---d~~i~~G~SG 280 (451)
...|+.|... ..+..|+.+++.||..... .......+.-+........ .......++-. ....+.|+||
T Consensus 117 ~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~C~GDSG 196 (245)
T 1t8o_A 117 TVSAVCLPSASDDFAAGTTCVTTGWGLTRYTNANTPDRLQQASLPLLSNTNCKKYWGTKIKDAMICAGASGVSSCMGDSG 196 (245)
T ss_dssp TBCCCBCCCTTCCCCTTCEEEEEESCCSCC--CCCCSBCEEEEEEEECHHHHHHHHGGGCCTTEEEEECSSCBCCTTCTT
T ss_pred ceeeeECCCCccCCCCCCEEEEEEeCCCCCCCCCCcchheEEEEeeEcchhhhHhhcCcCCCceEEccCCCCccCcccCc
Confidence 3567777543 2366899999999874321 1223333322222111000 00011223332 2457899999
Q ss_pred CceeCC-Cc--eEEEEEeeeeCCCCCccceeEEEeccCchhhHHHhhh
Q 013014 281 GPLLDS-SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (451)
Q Consensus 281 GPlvd~-~G--~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (451)
|||+.. +| .++||+++... +......+....+....+||++.++
T Consensus 197 gPL~~~~~~~~~l~GI~S~g~~-c~~~~~p~vyt~V~~~~~WI~~~~~ 243 (245)
T 1t8o_A 197 GPLVCKKNGAWTLVGIVSWGSS-TCSTSTPGVYARVTALVNWVQQTLA 243 (245)
T ss_dssp CEEEEEETTEEEEEEEEEECCT-TCCTTSEEEEEEGGGTHHHHHHHHH
T ss_pred CCEEEEECCEEEEEEEEEeCCC-CCCCCCCEEEEEHHHHHHHHHHHHc
Confidence 999864 34 79999998653 3323345677888888888887654
No 105
>1ddj_A Plasminogen; catalytic domain, blood clotting; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1bml_A 1l4d_A 1l4z_A 1bui_A* 1rjx_B 1qrz_A
Probab=99.29 E-value=4.1e-10 Score=107.05 Aligned_cols=173 Identities=16% Similarity=0.237 Sum_probs=108.0
Q ss_pred CeEEEEEEEcCCCeEEecccccCCC---CcEEEEeCC---------CcEEEEEEEEEcC-CCCEEEEEEcCCC---CCCc
Q 013014 151 QGSGSGFVWDSKGHVVTNYHVIRGA---SDIRVTFAD---------QSAYDAKIVGFDQ-DKDVAVLRIDAPK---DKLR 214 (451)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHVv~~~---~~i~V~~~d---------g~~~~a~vv~~d~-~~DlAlLkv~~~~---~~~~ 214 (451)
...|+|.+|+++ +|||+|||+.+. ..+.|.+.. .+.+...-+..++ .+||||||++.+. ....
T Consensus 41 ~~~CgGsLIs~~-~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~~~~hp~~~DIALl~L~~~v~~~~~v~ 119 (247)
T 1ddj_A 41 MHFCGGTLISPE-WVLTAAHCLEKSPRPSSYKVILGAHQEVNLEPHVQEIEVSRLFLEPTRKDIALLKLSSPAVITDKVI 119 (247)
T ss_dssp CEEEEEEEEETT-EEEECGGGGTTCSCGGGCEEEESCSBSSSCCTTCEEEEEEEEEECTTSCSCEEEEESSCCCCCSSCC
T ss_pred CeEEEEEEeeCC-EEEEcHHHcCCCCCCccEEEEEcccccCccCCceEEEEeeeEEcCCCCCcEEEEEeCCceeeCCCEE
Confidence 357999999987 999999999754 456676532 1334444445555 5799999998764 2356
Q ss_pred ceecCCCC-CCCCCcEEEEeeCCCCCC----CceEEeEEeeeeeeeccC---CCCCCcccEEEEc-----ccCCCCCCCC
Q 013014 215 PIPIGVSA-DLLVGQKVYAIGNPFGLD----HTLTTGVISGLRREISSA---ATGRPIQDVIQTD-----AAINPGNSGG 281 (451)
Q Consensus 215 ~l~l~~s~-~~~~G~~V~~iG~p~g~~----~~~~~G~Vs~~~~~~~~~---~~~~~~~~~i~~d-----~~i~~G~SGG 281 (451)
|+.|.... .+..|+.+++.||..... .......+.-+....... ........++-.. ...+.|+|||
T Consensus 120 picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGg 199 (247)
T 1ddj_A 120 PACLPSPNYVVADRTECFITGWGETQGTFGAGLLKEAQLPVIENKVCNRYEFLNGRVQSTELCAGHLAGGTDSCQGDAGG 199 (247)
T ss_dssp CCBCCCTTCCCCTTCEEEEEECCCCSSSTTTTBCEEEEEEEECHHHHTSTTTTTTCCCTTEEEESCSSSCCCBCCSCTTC
T ss_pred eeecCCcccCCCCCCEEEEEEcccCCCCCCCccceEEeeeecCHHHhcchhccCCCCcCCeEeecCCCCCCccccCcCcC
Confidence 77775432 356789999999875432 123333333222222211 0111123344432 3568999999
Q ss_pred ceeCC-Cc--eEEEEEeeeeCCCCCccceeEEEeccCchhhHHHhhh
Q 013014 282 PLLDS-SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (451)
Q Consensus 282 Plvd~-~G--~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (451)
||+-. +| .++||+++... ++.....+....+....+|+++.++
T Consensus 200 PL~~~~~~~~~l~GI~S~g~~-C~~~~~p~vyt~V~~y~~WI~~~~~ 245 (247)
T 1ddj_A 200 PLVCFEKDKYILQGVTSWGLG-CARPNKPGVYVRVSRFVTWIEGVMR 245 (247)
T ss_dssp EEEEECSSSEEEEEEECGGGC-CBBTTBCEEEEEGGGSHHHHHHHHH
T ss_pred cEEEEECCcEEEEEEEEECCC-CCCCCCCEEEEEhHHhHHHHHHHhh
Confidence 99853 33 69999998642 3322345667788888888887664
No 106
>3bg8_A Coagulation factor XIA light chain; protease inhibitor, factor XIA inhibitor complex, covalent inhibitor, alternative splicing, blood coagulation; HET: INH; 1.60A {Homo sapiens} PDB: 3sor_A* 3sos_A* 1zsl_A* 1zpz_A* 1zrk_A* 1xx9_A* 1zjd_A 1zhr_A 1zmj_A* 1zml_A* 1zmn_A* 1zom_A* 1zpb_A* 1zpc_A* 1zsj_A* 1zsk_A* 1ztj_A* 1ztk_A* 1ztl_A* 2fda_A* ...
Probab=99.28 E-value=1.4e-10 Score=109.60 Aligned_cols=172 Identities=19% Similarity=0.224 Sum_probs=107.2
Q ss_pred CeEEEEEEEcCCCeEEecccccCCC---CcEEEEeC---------CCcEEEEEEEEEcCC-------CCEEEEEEcCCC-
Q 013014 151 QGSGSGFVWDSKGHVVTNYHVIRGA---SDIRVTFA---------DQSAYDAKIVGFDQD-------KDVAVLRIDAPK- 210 (451)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHVv~~~---~~i~V~~~---------dg~~~~a~vv~~d~~-------~DlAlLkv~~~~- 210 (451)
...|+|.+|+++ +|||+|||+.+. ..+.|.+. +.+.+..+-+..|+. +||||||++.+.
T Consensus 26 ~~~CgGtLI~~~-~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~ 104 (238)
T 3bg8_A 26 RHLCGGSIIGNQ-WILTAAHCFYGVESPKILRVYSGILNQSEIKEDTSFFGVQEIIIHDQYKMAESGYDIALLKLETTVN 104 (238)
T ss_dssp EEEEEEEEEETT-EEEECGGGGTTCCCGGGEEEECSCSBGGGCCTTSCCEEEEEEEECTTCCCGGGSCCCEEEEESSCCC
T ss_pred cEEEEEEEeeCC-EEEECHHHCCCCCCCceEEEEEeeccCCcCCCCceEEeeEEEEECCCCCCCCCCCcEEEEEECCccc
Confidence 357999999987 999999999764 45777653 234566666666654 599999998754
Q ss_pred --CCCcceecCCCC-CCCCCcEEEEeeCCCCCC-----CceEEeEEeeeeeeecc--CCCCCCcccEEEE-----cccCC
Q 013014 211 --DKLRPIPIGVSA-DLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISS--AATGRPIQDVIQT-----DAAIN 275 (451)
Q Consensus 211 --~~~~~l~l~~s~-~~~~G~~V~~iG~p~g~~-----~~~~~G~Vs~~~~~~~~--~~~~~~~~~~i~~-----d~~i~ 275 (451)
....|+.|.... ....++.+++.||..... .......+.-+...... +........++.. ....+
T Consensus 105 ~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~C 184 (238)
T 3bg8_A 105 YTDSQRPISLPSKGERNVIYTDCWVTGWGYRKLRDKIQNTLQKAKIPLVTNEECQKRYRGHKITHKMICAGYREGGKDAC 184 (238)
T ss_dssp CBTTBCCCBCCCGGGGSSCCCCEEEEESCCSSSSCCCCSBCEEEECCEECHHHHHHHCTTSCCCTTEEEECCTTCCCBCC
T ss_pred cCCCcccCCCCCCccCcCCCCeEEEEecCCCCCCCChhhhhcEeeEEEECHHHhhhhhcCCCCCCCeEeecCCCCCCCcC
Confidence 235677775432 256788999999864322 12222222222211111 1110111234443 23578
Q ss_pred CCCCCCceeCC-Cc--eEEEEEeeeeCCCCCccceeEEEeccCchhhHHHhh
Q 013014 276 PGNSGGPLLDS-SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLV 324 (451)
Q Consensus 276 ~G~SGGPlvd~-~G--~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~ 324 (451)
.|+|||||+.. +| .++||+++.. .++.....+...-+....+|+++.+
T Consensus 185 ~GDSGgPL~~~~~~~~~l~GI~S~g~-~C~~~~~p~vyt~V~~y~~WI~~~~ 235 (238)
T 3bg8_A 185 KGDSGGPLSCKHNEVWHLVGITSWGE-GCAQRERPGVYTNVVEYVDWILEKT 235 (238)
T ss_dssp TTCTTCEEEEEETTEEEEEEEEEECS-SSSCTTCCEEEEEGGGGHHHHHHHH
T ss_pred CCCCCcceEEEECCeEEEEEEEEECC-CCCCCCCCcEEEeHHHHHHHHHHHH
Confidence 99999999864 44 5999999864 2333334566778888888887754
No 107
>4dgj_A Enteropeptidase catalytic light chain; serine protease, hydrolase; 1.90A {Homo sapiens} PDB: 1ekb_B
Probab=99.28 E-value=2.3e-10 Score=107.68 Aligned_cols=172 Identities=16% Similarity=0.187 Sum_probs=105.9
Q ss_pred CeEEEEEEEcCCCeEEecccccCCC----CcEEEEeCC----------CcEEEEEEEEEcCC-------CCEEEEEEcCC
Q 013014 151 QGSGSGFVWDSKGHVVTNYHVIRGA----SDIRVTFAD----------QSAYDAKIVGFDQD-------KDVAVLRIDAP 209 (451)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHVv~~~----~~i~V~~~d----------g~~~~a~vv~~d~~-------~DlAlLkv~~~ 209 (451)
...|+|.+|+++ +|||+|||+.+. ..+.+.+.. ...+..+-+..|+. +|||||+++.+
T Consensus 23 ~~~CgGtLI~~~-~VLTAAHC~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DiALl~L~~~ 101 (235)
T 4dgj_A 23 RLLCGASLVSSD-WLVSAAHCVYGRNLEPSKWTAILGLHMKSNLTSPQTVPRLIDEIVINPHYNRRRKDNDIAMMHLEFK 101 (235)
T ss_dssp EEEEEEEECSSS-EEEECHHHHTTSCSSGGGEEEEESCCBTTCCSCTTCEEEEEEEEEECTTCBTTTTBTCCEEEEESSC
T ss_pred CeEEEEEEeeCC-EEEECHHhcCCCCCCCccEEEEEeeecccccCCCceeEEeEEEEEECCCCCCCCCCCeEEEEEECCc
Confidence 357999999987 999999999543 356666531 22344555666664 59999999865
Q ss_pred C---CCCcceecCCCC-CCCCCcEEEEeeCCCCCC-----CceEEeEEeeeeeeecc--CCCCCCcccEEEEc-----cc
Q 013014 210 K---DKLRPIPIGVSA-DLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISS--AATGRPIQDVIQTD-----AA 273 (451)
Q Consensus 210 ~---~~~~~l~l~~s~-~~~~G~~V~~iG~p~g~~-----~~~~~G~Vs~~~~~~~~--~~~~~~~~~~i~~d-----~~ 273 (451)
. ....|+.|.... .+..|+.+.+.||..... .......+.-+...... +........++... ..
T Consensus 102 ~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~ 181 (235)
T 4dgj_A 102 VNYTDYIQPISLPEENQVFPPGRNCSIAGWGTVVYQGTTADILQEADVPLLSNERCQQQMPEYNITENMICAGYEEGGID 181 (235)
T ss_dssp CCCBTTBCCCBCCCTTCCCCTTCEEEEEESSBSSTTCCBCSBCEEEEEEEECHHHHHHHCTTSCCCTTEEEECCTTCCCB
T ss_pred cccCCcccccCCCCcccCCCCCCEEEEEecccCCCCCccchhheEeEeeecCHHHhhhhccCccCCCCeEeecCCCCCCc
Confidence 4 235677775433 356899999999863221 12233333322222111 11101113344432 35
Q ss_pred CCCCCCCCceeCC-Cc--eEEEEEeeeeCCCCCccceeEEEeccCchhhHHHhh
Q 013014 274 INPGNSGGPLLDS-SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLV 324 (451)
Q Consensus 274 i~~G~SGGPlvd~-~G--~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~ 324 (451)
.+.|+|||||+.. +| .++||+++... ++.....+....+....+|+++.+
T Consensus 182 ~C~GDsGgPl~~~~~~~~~l~Gi~S~g~~-c~~~~~p~vyt~V~~~~~WI~~~i 234 (235)
T 4dgj_A 182 SCQGDSGGPLMCQENNRWFLAGVTSFGYE-CALPNRPGVYARVSRFTEWIQSFL 234 (235)
T ss_dssp CCTTCTTCEEEEEETTEEEEEEEEEECSS-SSCTTCCEEEEEGGGTHHHHHTTC
T ss_pred cCCCCCCCeEEEEECCcEEEEEEEEEcCC-CCCCCCCEEEeeHHHHHHHHHHHh
Confidence 6889999999964 34 49999998743 333334566777888888887654
No 108
>1fon_A Procarboxypeptidase A-S6; truncated zymogen E, serine protease; 1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1pyt_C
Probab=99.28 E-value=1.5e-11 Score=116.50 Aligned_cols=173 Identities=17% Similarity=0.184 Sum_probs=106.5
Q ss_pred eEEEEEEEcCCCeEEecccccCCCCcEEEEeCCC--c---------EEEEEEEEEcC-------C--CCEEEEEEcCCC-
Q 013014 152 GSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQ--S---------AYDAKIVGFDQ-------D--KDVAVLRIDAPK- 210 (451)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHVv~~~~~i~V~~~dg--~---------~~~a~vv~~d~-------~--~DlAlLkv~~~~- 210 (451)
..|+|.+|+++ +|||+|||+.+...+.|.+..- . .+..+-+..|+ . +|||||+++.+.
T Consensus 26 ~~CgGtLIs~~-~VLTAAhC~~~~~~~~v~~G~~~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~DIALl~L~~~v~ 104 (240)
T 1fon_A 26 HTCGGSLIAPD-WVVTAGHCISTSRTYQVVLGEYDRSVLEGSEQVIPINAGDLFVHPLWNSNCVACGNDIALVKLSRSAQ 104 (240)
T ss_dssp EEECCEEEETT-EEEECGGGCCTTSCEEEEEEEEETTEEEEEEEEEEECTTSEEECTTCCTTCGGGCCCCEEEECSSCCC
T ss_pred eEEEEEEeeCC-EEEECHHHCCCCCceEEEeeeeeccccCCCceeEeeeeeEEEECCCCcCCCccCCCCEEEEEecCccc
Confidence 57999999987 9999999998877777766321 1 11111233443 2 799999998764
Q ss_pred --CCCcceecCCCC-CCCCCcEEEEeeCCCCCC-----CceEEeEEeeeeeeeccCC--CC-CCcccEEEEc---ccCCC
Q 013014 211 --DKLRPIPIGVSA-DLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISSAA--TG-RPIQDVIQTD---AAINP 276 (451)
Q Consensus 211 --~~~~~l~l~~s~-~~~~G~~V~~iG~p~g~~-----~~~~~G~Vs~~~~~~~~~~--~~-~~~~~~i~~d---~~i~~ 276 (451)
....|+.|.... .+..|+.+++.||..... .......+.-+........ .+ .....++... ...+.
T Consensus 105 ~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~C~ 184 (240)
T 1fon_A 105 LGDKVQLANLPPAGDILPNEAPCYISGWGRLYTGGPLPDKLQQALLPTVDYEHCSQWDWWGITVKKTMVCAGGDTRSGCN 184 (240)
T ss_dssp CTTSCCCCBCCCTTCCCCTTCCCEEEECTTCCCSSSCCSBCEEEECCEECHHHHTSTTTTGGGCCTTEEEECCSSSCSTT
T ss_pred cCCcccccCCCCcccCCCCCCeEEEEEEeEcCCCCCCChhheEEEEeeeCHHHhccceecCCccccceEeecCCCCcccC
Confidence 235677775442 356799999999874321 1222333222222211110 00 0112334332 45688
Q ss_pred CCCCCceeCC--Cc--eEEEEEeeee-CCCCCccceeEEEeccCchhhHHHhhh
Q 013014 277 GNSGGPLLDS--SG--SLIGINTAIY-SPSGASSGVGFSIPVDTVNGIVDQLVK 325 (451)
Q Consensus 277 G~SGGPlvd~--~G--~VVGI~s~~~-~~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (451)
|+|||||+-. +| .++||+++.. ..++.....+....+....+||++.++
T Consensus 185 GDsGgPL~~~~~~~~~~l~Gi~S~g~~~~C~~~~~p~vyt~V~~~~~WI~~~~~ 238 (240)
T 1fon_A 185 GDSGGPLNCPAADGSWQVHGVTSFVSAFGCNTIKKPTVFTRVSAFIDWIDETIA 238 (240)
T ss_dssp SCTTCEEEEECSSSCEEEEEEEEECCTTCSSBTTBCEEEEEGGGSHHHHHHHHH
T ss_pred CCCCCeEEeEcCCCCEEEEEEEEEcCCCCCCCCCCCcEEEEhHHHHHHHHHHHh
Confidence 9999999853 56 8999999864 233333345677888888888887654
No 109
>2i6v_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.63A {Vibrio cholerae} SCOP: b.36.1.5
Probab=99.28 E-value=6.6e-12 Score=100.34 Aligned_cols=70 Identities=16% Similarity=0.169 Sum_probs=63.6
Q ss_pred ccceEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEcCCHHHHHHHHhcCCCCCEEEEEEEECCeEEEEEEE
Q 013014 349 VSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDELLLQGIKQPPVLSDNLR 428 (451)
Q Consensus 349 ~~Gv~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i~~~~dl~~~l~~~~~g~~v~l~v~R~g~~~~~~v~ 428 (451)
..|+.|..+.++|+|+++||++ ||+|++|||++|.++.|+.+++...++|++++++|.|+|+..+++++
T Consensus 18 ~~G~~V~~~~~~s~A~~aGl~~-----------GD~I~~ing~~v~~~~d~~~~~~~~~~g~~v~l~v~R~g~~~~~~v~ 86 (87)
T 2i6v_A 18 VLGYRVSPGKDPVLFESIGLQD-----------GDMAVALNGLDLTDPNVMNTLFQSMNEMTEMSLTVERDGQQHDVYIQ 86 (87)
T ss_dssp EEEEEEEECSCHHHHHHTTCCT-----------TCEEEEETTEETTCHHHHHHHHHTGGGCSEEEEEEEETTEEEEEEEE
T ss_pred EEEEEEEeCCCCCHHHHCCCCC-----------CCEEEEECCEECCCHHHHHHHHHhcCCCCEEEEEEEECCEEEEEEEE
Confidence 3688899999999999999999 99999999999999999999988767799999999999998887776
Q ss_pred e
Q 013014 429 L 429 (451)
Q Consensus 429 l 429 (451)
+
T Consensus 87 l 87 (87)
T 2i6v_A 87 F 87 (87)
T ss_dssp C
T ss_pred C
Confidence 4
No 110
>1fiw_A Beta-acrosin heavy chain; anti-parallel beta-barrel, hydrolase; HET: NAG FUL BMA MAN PBZ; 2.10A {Ovis aries} SCOP: b.47.1.2 PDB: 1fiz_A*
Probab=99.25 E-value=1e-09 Score=107.08 Aligned_cols=173 Identities=17% Similarity=0.207 Sum_probs=108.0
Q ss_pred eEEEEEEEcCCCeEEecccccCCC---CcEEEEeCC--------------CcEEEEEEEEEcCC-------CCEEEEEEc
Q 013014 152 GSGSGFVWDSKGHVVTNYHVIRGA---SDIRVTFAD--------------QSAYDAKIVGFDQD-------KDVAVLRID 207 (451)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHVv~~~---~~i~V~~~d--------------g~~~~a~vv~~d~~-------~DlAlLkv~ 207 (451)
..|.|.+|+++ +|||+|||+.+. ..+.|.+.. .+.+..+-+..|+. +||||||++
T Consensus 30 ~~CgGsLIs~~-~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~~~~~V~~i~~Hp~y~~~~~~nDIALl~L~ 108 (290)
T 1fiw_A 30 HVCGGSLLNSQ-WLLTAAHCFRIKKKVTDWRLIFGAKEVEWGTNKPVKPPLQERYVEKIIIHEKYSASSEANDIALMKIT 108 (290)
T ss_dssp EEEEEEEEETT-EEEECGGGGSSCCSGGGEEEEESCSBCCTTCCSCCCTTCEEEEEEEEEECTTCBTTTTBTCCEEEEEE
T ss_pred eEEEEEEeeCC-EEEECHHhCCCCCCCcceEEEecceEEeccCCCcCCCCceEEEEEEEEECCCCCCCCCCCCEEEEEEC
Confidence 47999999986 999999999754 356666532 23445555566654 599999998
Q ss_pred CCC---CCCcceecCCCC--CCCCCcEEEEeeCCCCCC------CceEEeEEeeeeeeeccCC---CCCCcccEEEEc--
Q 013014 208 APK---DKLRPIPIGVSA--DLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISSAA---TGRPIQDVIQTD-- 271 (451)
Q Consensus 208 ~~~---~~~~~l~l~~s~--~~~~G~~V~~iG~p~g~~------~~~~~G~Vs~~~~~~~~~~---~~~~~~~~i~~d-- 271 (451)
.+. ....|+.|.... ....|+.+++.||..... .......+.-+....+... .......++...
T Consensus 109 ~~v~~~~~v~PicLp~~~~~~~~~~~~~~v~GWG~~~~~~~~~~~~L~~~~v~i~~~~~C~~~~~~~~~i~~~~iCag~~ 188 (290)
T 1fiw_A 109 PPVTCGHFIGPGCLPQFRAGPPRVPQTCWVAGWGFLQENARRTSPMLQEARVDLIDLGLCNSTRWYNGRIRSTNVCAGYP 188 (290)
T ss_dssp SCCCCBTTBCCCBCCCTTCCSCCSSCEEEEEESCCSSTTCSSCCSBCEEEEEEEECHHHHTSTTTTTTCCCTTEEEEECT
T ss_pred CccccCCccccccCCCccccCcCCCCeEEEEEeccCCCCCCCCCceeeEEEEEEecHHHhccccccCCcCCCCEEEEecC
Confidence 764 235677775332 245699999999874321 1233333433333222110 011123344432
Q ss_pred ---ccCCCCCCCCceeCCC---c--eEEEEEeeeeCCCCCccceeEEEeccCchhhHHHhhhc
Q 013014 272 ---AAINPGNSGGPLLDSS---G--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKF 326 (451)
Q Consensus 272 ---~~i~~G~SGGPlvd~~---G--~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~~ 326 (451)
...|.|+|||||+-.+ | .++||++++.. ++.....+...-+....+||++.++.
T Consensus 189 ~~~~~~C~GDSGGPLv~~~~~~~~~~l~GIvS~g~~-C~~~~~p~vyt~V~~y~~WI~~~~~~ 250 (290)
T 1fiw_A 189 EGKIDTCQGDSGGPLMCKDSAENSYVVVGITSWGVG-CARAKRPGVYTSTWSYLNWIASKIGS 250 (290)
T ss_dssp TCSSBCCTTCTTCEEEEECSSSSCEEEEEEEEECSS-SSBTTBCEEEEESGGGHHHHHHHHCH
T ss_pred CCCCeeCCCCCchheEEEECCCCCEEEEEEEEECCC-CCCCCCCeEEEEHHHhHHHHHHHhCc
Confidence 3578999999998532 3 69999998642 33333456677788888888876653
No 111
>2bz6_H Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: b.47.1.2 PDB: 1cvw_H* 1dva_H* 1fak_H* 1j9c_H* 1jbu_H 1dan_H 1klj_H 1o5d_H* 1qfk_H* 1w0y_H* 1w2k_H* 1w7x_H* 1w8b_H* 1wqv_H* 1wss_H* 1wtg_H* 1wun_H* 1wv7_H* 1ygc_H* 1z6j_H* ...
Probab=99.25 E-value=1.3e-10 Score=110.94 Aligned_cols=174 Identities=17% Similarity=0.175 Sum_probs=108.6
Q ss_pred CeEEEEEEEcCCCeEEecccccCCCC---cEEEEeCC---------CcEEEEEEEEEcCC-------CCEEEEEEcCCC-
Q 013014 151 QGSGSGFVWDSKGHVVTNYHVIRGAS---DIRVTFAD---------QSAYDAKIVGFDQD-------KDVAVLRIDAPK- 210 (451)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHVv~~~~---~i~V~~~d---------g~~~~a~vv~~d~~-------~DlAlLkv~~~~- 210 (451)
...|+|.+|+++ +|||+|||+.+.. .+.|.+.. .+.+..+-+..|+. +|||||+++.+.
T Consensus 23 ~~~CgGtLIs~~-~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~v~ 101 (254)
T 2bz6_H 23 AQLCGGTLINTI-WVVSAAHCFDKIKNWRNLIAVLGEHDLSEHDGDEQSRRVAQVIIPSTYVPGTTNHDIALLRLHQPVV 101 (254)
T ss_dssp EEEEEEEECSSS-EEEECGGGGTTCSCGGGEEEEESCCBTTCCCSCCEEEEEEEEEEETTCCTTSCSSCCEEEEESSCCC
T ss_pred CcEEEEEEecCC-EEEECHHHcCCCCCcceEEEEECCcccCCCCCCcEEEEEEEEEECCCCCCCCCcCcEEEEEECCccc
Confidence 357999999976 9999999998654 47777642 24455555555543 599999998754
Q ss_pred --CCCcceecCCCC----CCCCCcEEEEeeCCCCCC-----CceEEeEEeeeeeeecc--CCC----CCCcccEEEEc--
Q 013014 211 --DKLRPIPIGVSA----DLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISS--AAT----GRPIQDVIQTD-- 271 (451)
Q Consensus 211 --~~~~~l~l~~s~----~~~~G~~V~~iG~p~g~~-----~~~~~G~Vs~~~~~~~~--~~~----~~~~~~~i~~d-- 271 (451)
....|+.|.... .+..|+.+++.||..... .......+.-+...... +.. ......++...
T Consensus 102 ~~~~v~picLp~~~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~Ca~~~ 181 (254)
T 2bz6_H 102 LTDHVVPLCLPERTFSERTLAFVRFSLVSGWGQLLDRGATALELMVLNVPRLMTQDCLQQSRKVGDSPNITEYMFCAGYS 181 (254)
T ss_dssp CBTTBCCCBCCCHHHHHHTGGGCCEEEEEESCBSSTTSCBCSBCEEEEEEEECHHHHHHHSCCCTTCCCCCTTEEEESCS
T ss_pred cCCCccceECCCCccccccccCCCcEEEEeCcccCCCCCCChhheeeeeeeecHHHHhhhhhccccCCccCCCEEeecCC
Confidence 235667664321 245689999999864322 12233333222221111 000 01113344432
Q ss_pred ---ccCCCCCCCCceeCC-Cc--eEEEEEeeeeCCCCCccceeEEEeccCchhhHHHhhhc
Q 013014 272 ---AAINPGNSGGPLLDS-SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKF 326 (451)
Q Consensus 272 ---~~i~~G~SGGPlvd~-~G--~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~~ 326 (451)
...+.|+|||||+.. +| .++||+++... ++.....+....+....+|+++.++.
T Consensus 182 ~~~~~~C~GDSGgPl~~~~~g~~~l~GI~S~g~~-C~~~~~p~vyt~V~~~~~WI~~~~~~ 241 (254)
T 2bz6_H 182 DGSKDSCKGDSGGPHATHYRGTWYLTGIVSWGQG-CATVGHFGVYTRVSQYIEWLQKLMRS 241 (254)
T ss_dssp SSSCBCCGGGTTCEEEEEETTEEEEEEEEEECSS-SSCTTCCEEEEEGGGGHHHHHHHHTS
T ss_pred CCCCccccccCCCceEEeECCEEEEEEEEEECCC-CCCCCCCeEEEEHHHHHHHHHHHHhc
Confidence 357889999999864 45 59999998643 43333456778888888999887653
No 112
>2wph_S Coagulation factor IXA heavy chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpj_S* 2wpk_S* 2wpl_S* 2wpi_S* 2wpm_S 3lc3_A* 1rfn_A* 3lc5_A* 3kcg_H* 1x7a_C* 1pfx_C*
Probab=99.24 E-value=1.6e-10 Score=108.89 Aligned_cols=173 Identities=19% Similarity=0.197 Sum_probs=106.6
Q ss_pred CeEEEEEEEcCCCeEEecccccCCCCcEEEEeCC---------CcEEEEEEEEEcCC---------CCEEEEEEcCCC--
Q 013014 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD---------QSAYDAKIVGFDQD---------KDVAVLRIDAPK-- 210 (451)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHVv~~~~~i~V~~~d---------g~~~~a~vv~~d~~---------~DlAlLkv~~~~-- 210 (451)
...|+|.+|+++ +|||+|||+.....+.|.+.. .+.+..+-+..|+. +||||||++.+.
T Consensus 23 ~~~CgGtLIs~~-~VLTAAhC~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~DIALl~L~~~~~~ 101 (235)
T 2wph_S 23 DAFCGGSIVNEK-WIVTAAHCVETGVKITVVAGEHNIEETEHTEQKRNVIRIIPHHNFNAAINTYNHDIALLELDEPLVL 101 (235)
T ss_dssp TTCEEEEEEETT-EEEECGGGCCTTSCCEEEESCCBTTSCCSCCEEEEEEEEEECTTTTSSSSCCTTCCEEEEESSCCCC
T ss_pred CeeEEEEEEeCC-EEEECHHHCcCCCCEEEEEcccccCCCCCCcEEeeeEEEEeCCCCcccCCcCCCCEEEEEECCcCcC
Confidence 347999999987 999999999887777777642 23455555555542 599999998764
Q ss_pred -CCCcceecCCCCC---CCCCcEEEEeeCCCCCC-----CceEEeEEeeeeeeeccCCCC-CCcccEEEEc-----ccCC
Q 013014 211 -DKLRPIPIGVSAD---LLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISSAATG-RPIQDVIQTD-----AAIN 275 (451)
Q Consensus 211 -~~~~~l~l~~s~~---~~~G~~V~~iG~p~g~~-----~~~~~G~Vs~~~~~~~~~~~~-~~~~~~i~~d-----~~i~ 275 (451)
....|+.|..... +..++.+++.||..... .......+.-+.......... .....++... ...+
T Consensus 102 ~~~v~picL~~~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C 181 (235)
T 2wph_S 102 NSYVTPICIADKEYTNIFLKFGSGYVSGWGRVFHKGRSALVLQYLRVPLVDRATCLRSTKFTITNNMFCAGFHEGGRDSC 181 (235)
T ss_dssp BTTBCCCBCCCHHHHHHHHHTCEEEEEESSBSSTTSCBCSBCEEEEEEEECHHHHHHTCSSCCCTTEEEESCTTCSCBCC
T ss_pred CCCccccCCCCCcccccccCCccEEEEeCCCccCCCCccchheEeeeeeeCHHHhcCcccCCCCCCEEEeCCCCCCCccC
Confidence 2355666643221 23578899999864321 122233332222221111000 1113344432 3578
Q ss_pred CCCCCCceeCC-Cc--eEEEEEeeeeCCCCCccceeEEEeccCchhhHHHhhh
Q 013014 276 PGNSGGPLLDS-SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (451)
Q Consensus 276 ~G~SGGPlvd~-~G--~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (451)
.|+|||||+.. +| .++||+++... ++.....+....+....+|+++.++
T Consensus 182 ~GDsGgPl~~~~~~~~~l~GI~S~g~~-C~~~~~p~vyt~V~~~~~WI~~~~~ 233 (235)
T 2wph_S 182 QGDSGGPHVTEVEGTSFLTGIISWGEE-CAMKGKYGIYTKVSRYVNWIKEKTK 233 (235)
T ss_dssp TTCTTCEEEEEETTEEEEEEEEEECSS-SSCTTCCEEEEEGGGGHHHHHHHCC
T ss_pred CCCCCCceEEeECCeEEEEEEEEECCC-CCCCCCCeEEEEHHHhHHHHHHHHh
Confidence 99999999853 44 59999998642 4433445677888888888877543
No 113
>3rm2_H Thrombin heavy chain; serine protease, kringle, hydrolase, blood coagulation, BLOO clotting, convertion of fibrinogen to fibrin; HET: TYS NAG S00; 1.23A {Homo sapiens} PDB: 1a2c_H* 1a3e_H* 1a46_H* 1a4w_H* 1a5g_H* 1a61_H* 1abi_H* 1abj_H* 1ad8_H* 1ae8_H* 1afe_H* 1a3b_H* 1ai8_H* 1aix_H* 1awf_H* 1awh_B* 1ay6_H* 1b5g_H* 1ba8_B* 1bb0_B* ...
Probab=99.23 E-value=2.1e-10 Score=109.19 Aligned_cols=172 Identities=17% Similarity=0.221 Sum_probs=104.4
Q ss_pred eEEEEEEEcCCCeEEecccccC--------CCCcEEEEeCCC----------cEEEEEEEEEcC--------CCCEEEEE
Q 013014 152 GSGSGFVWDSKGHVVTNYHVIR--------GASDIRVTFADQ----------SAYDAKIVGFDQ--------DKDVAVLR 205 (451)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHVv~--------~~~~i~V~~~dg----------~~~~a~vv~~d~--------~~DlAlLk 205 (451)
..|+|.+|+++ +|||+|||+. ....+.|.+... +....+-+..|+ .+|||||+
T Consensus 26 ~~CgGtLI~~~-~VLTAAHC~~~~~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~DIALl~ 104 (259)
T 3rm2_H 26 LLCGASLISDR-WVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMK 104 (259)
T ss_dssp EEEEEEECSSS-EEEECGGGTEEGGGTEECCGGGEEEEESCCBSSSCCTTTCEEEEEEEEEECTTCBTTTTCBTCCEEEE
T ss_pred eEEEEEEEeCC-EEEEcHHhCcccccccccCcccEEEEECcccccccccCcceeeEEEEEEECCCCCCCCCCCCcEEEEE
Confidence 47999999986 9999999994 234567766321 223345455554 24999999
Q ss_pred EcCCC---CCCcceecCCCCC----CCCCcEEEEeeCCCCCC-----------CceEEeEEeeeeeeeccCCCC-CCccc
Q 013014 206 IDAPK---DKLRPIPIGVSAD----LLVGQKVYAIGNPFGLD-----------HTLTTGVISGLRREISSAATG-RPIQD 266 (451)
Q Consensus 206 v~~~~---~~~~~l~l~~s~~----~~~G~~V~~iG~p~g~~-----------~~~~~G~Vs~~~~~~~~~~~~-~~~~~ 266 (451)
++.+. ....|+.|..... +..|..+.+.||..... .......+.-+....+..... .....
T Consensus 105 L~~~v~~~~~v~picLp~~~~~~~~~~~g~~~~v~GwG~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~ 184 (259)
T 3rm2_H 105 LKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVERPVCKDSTRIRITDN 184 (259)
T ss_dssp ESSCCCCBTTBCCCBCCCHHHHHHHCCTTCEEEEEESCCSSCC-------CCCSBCEEEEEEBCCHHHHHHTCSSCCCTT
T ss_pred eCCceEcCCCcccccCCCccccccccCCCCEEEEeecCCCcCcCCccccccccccceEEEEEEeCHHHhhhhhcccCCCc
Confidence 98754 2355666643221 35699999999874321 122222232222211111111 11133
Q ss_pred EEEEc--------ccCCCCCCCCceeCC---Cc--eEEEEEeeeeCCCCCccceeEEEeccCchhhHHHhhh
Q 013014 267 VIQTD--------AAINPGNSGGPLLDS---SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (451)
Q Consensus 267 ~i~~d--------~~i~~G~SGGPlvd~---~G--~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (451)
++... ...+.|+|||||+.. +| .++||+++.. .++.....+....+...++||++.++
T Consensus 185 ~~Cag~~~~~~~~~~~C~GDsGgPL~~~~~~~~~~~l~GI~S~g~-~C~~~~~p~vyt~V~~~~~WI~~~i~ 255 (259)
T 3rm2_H 185 MFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGE-GCDRDGKYGFYTHVFRLKKWIQKVID 255 (259)
T ss_dssp EEEECCCGGGSCCCBCCTTCTTCEEEEECTTTCCEEEEEEEEECS-SSSCTTCCEEEEETGGGHHHHHHHHH
T ss_pred eEeeeccCCCCCCCcccCCCCCCeeEEEECCCCCEEEEEEEEECC-CCCCCCCCeEEEEHHHhHHHHHHHHH
Confidence 44442 267899999999853 23 6999999863 34433345677888888888887664
No 114
>1z8g_A Serine protease hepsin; serine protease hepsin, protease, hydrolase-hydrolase inhibi complex; HET: AR7; 1.55A {Homo sapiens} SCOP: b.47.1.2 d.170.1.2 PDB: 3t2n_A 1o5e_H* 1o5f_H* 1p57_B* 1o5e_L* 1o5f_L* 1p57_A*
Probab=99.22 E-value=7.3e-10 Score=112.02 Aligned_cols=174 Identities=16% Similarity=0.189 Sum_probs=109.5
Q ss_pred CeEEEEEEEcCCCeEEecccccCC----CCcEEEEeCC-------CcEEEEEEEEEcCC-------------CCEEEEEE
Q 013014 151 QGSGSGFVWDSKGHVVTNYHVIRG----ASDIRVTFAD-------QSAYDAKIVGFDQD-------------KDVAVLRI 206 (451)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHVv~~----~~~i~V~~~d-------g~~~~a~vv~~d~~-------------~DlAlLkv 206 (451)
...+.|.+|+++ +|||+|||+.. ...+.|.+.. +..+..+-+..|+. +||||||+
T Consensus 140 ~~~CgGsLIs~~-~VLTAAHCv~~~~~~~~~~~V~~G~~~~~~~~~~~~~V~~i~~Hp~y~~~~~~~~~~~~nDIALlkL 218 (372)
T 1z8g_A 140 AHLCGGSLLSGD-WVLTAAHCFPERNRVLSRWRVFAGAVAQASPHGLQLGVQAVVYHGGYLPFRDPNSEENSNDIALVHL 218 (372)
T ss_dssp EEEEEEEESSSS-EEEECGGGCCGGGCCGGGEEEEESCSBTTCTTSEEECEEEEEEETTCGGGTCTTCCCCTTCCEEEEE
T ss_pred ceEEEEEEecCC-EEEEChhhcCCCCCccceEEEEEeeEeccCCCCcEEEEEEEEECCCccccccCCCCCCCccEEEEEE
Confidence 357999999986 99999999942 3457776632 33455655555543 49999999
Q ss_pred cCCC---CCCcceecCCC-CCCCCCcEEEEeeCCCCCC-----CceEEeEEeeeeeeeccC---CCCCCcccEEEEc---
Q 013014 207 DAPK---DKLRPIPIGVS-ADLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISSA---ATGRPIQDVIQTD--- 271 (451)
Q Consensus 207 ~~~~---~~~~~l~l~~s-~~~~~G~~V~~iG~p~g~~-----~~~~~G~Vs~~~~~~~~~---~~~~~~~~~i~~d--- 271 (451)
+.+. ..+.|+.|... ..+..|+.+++.||..... .......+.-+....... ........++-..
T Consensus 219 ~~pv~~~~~v~PicLp~~~~~~~~g~~~~v~GWG~t~~~~~~~~~L~~~~v~ii~~~~C~~~~~~~~~i~~~~iCag~~~ 298 (372)
T 1z8g_A 219 SSPLPLTEYIQPVCLPAAGQALVDGKICTVTGWGNTQYYGQQAGVLQEARVPIISNDVCNGADFYGNQIKPKMFCAGYPE 298 (372)
T ss_dssp SSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESSBSSTTSCBCSBCEEEEEEEECHHHHTSTTTTTTCCCTTEEEESCTT
T ss_pred CCCCCCCCceeccccCCcccCCCCCCEEEEEecCCCCCCCCCCceeeEEEEEecChHHhCcchhcCCcCCCCeEeeecCC
Confidence 8754 24567777543 3456799999999874321 123333333333222211 0111123444432
Q ss_pred --ccCCCCCCCCceeCCC-----c--eEEEEEeeeeCCCCCccceeEEEeccCchhhHHHhhhc
Q 013014 272 --AAINPGNSGGPLLDSS-----G--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKF 326 (451)
Q Consensus 272 --~~i~~G~SGGPlvd~~-----G--~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~~ 326 (451)
...+.|+|||||+-.+ | .++||++++.. ++.....+....+....+||++.++.
T Consensus 299 ~~~d~C~GDSGGPLv~~~~~~~~~~~~lvGIvS~G~~-C~~~~~p~vyt~V~~y~~WI~~~i~~ 361 (372)
T 1z8g_A 299 GGIDACQGDSGGPFVCEDSISRTPRWRLCGIVSWGTG-CALAQKPGVYTKVSDFREWIFQAIKT 361 (372)
T ss_dssp CSCBCCTTCTTCEEEEEECTTSSCEEEEEEEEEEBSS-SSCTTCCEEEEEGGGGHHHHHHHHHH
T ss_pred CCCcCCCCCCccceEeccCcCCCCCEEEEEEEEeCCC-CCCCCCCeEEEEHHHHHHHHHHHHhc
Confidence 3578999999998532 3 69999998743 33333456778888888888876653
No 115
>1zyo_A Serine protease; beta-barrel, glutamyl endopeptidase, hydrolase; 2.40A {Sesbania mosaic virus}
Probab=99.22 E-value=8e-11 Score=107.60 Aligned_cols=160 Identities=16% Similarity=0.107 Sum_probs=100.8
Q ss_pred CceEEEEeeeeccCccccccccccCeEEEEEEEcCCC--eEEecccccCCCCcEEEEeCCCcEEE-----EEEEEEcCCC
Q 013014 127 PSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKG--HVVTNYHVIRGASDIRVTFADQSAYD-----AKIVGFDQDK 199 (451)
Q Consensus 127 ~SVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~G--~ILT~aHVv~~~~~i~V~~~dg~~~~-----a~vv~~d~~~ 199 (451)
++||.|...+ ...|+|+.|..+| ++|||+||+.+.........+++.++ ......|+..
T Consensus 16 ~svv~l~~~d--------------~h~G~g~~V~~~G~~~LlTA~Hv~~~~~~~~~~~k~g~~ip~~~~~~~~~~~d~~~ 81 (191)
T 1zyo_A 16 ASLVAIKSGP--------------TTIGFGCRTKIDGEDCLLTAHHVWCNSMRPTGLAKAGKQVSVEDWEISMSSSDKML 81 (191)
T ss_dssp SSEEEEEETT--------------EEEEEEEEEEC--CEEEEECHHHHTSSSCCCEEEETTEEEECCSCEEEEEECCTTT
T ss_pred CeEEEEEeCC--------------eEEEEEEEEEECCCcEEEEChhhCcCCcceeeecCCCCEEEcccceeeEccCCCCC
Confidence 4588887621 3478888886554 89999999987532122223554443 3344456789
Q ss_pred CEEEEEEcCCCC---CCcceecCCCCCCCCCcEEEEeeCCCCCCCceEEeEEeeeeeeeccCCCCCCcccEEEEcccCCC
Q 013014 200 DVAVLRIDAPKD---KLRPIPIGVSADLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINP 276 (451)
Q Consensus 200 DlAlLkv~~~~~---~~~~l~l~~s~~~~~G~~V~~iG~p~g~~~~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~ 276 (451)
|+||+++....+ ...++.+. ....++.|.+.|++.........|+.... .....+++++...+
T Consensus 82 D~all~vp~~~~s~lg~~~a~~~---~~~~~~~vt~yg~~~~~~~~s~~g~~~~~-----------~~~~~~~~~~~T~~ 147 (191)
T 1zyo_A 82 DFAIVRVPTHVWSKLGVKSTPLV---CPSSKDVITCYGGSSSDCLMSGVGSSSTS-----------EFTWKLTHTCPTAA 147 (191)
T ss_dssp CEEEEECCHHHHHHHTCCCCCBC---CCCSCEEEEEEEESSTTSEEEEEEEEEEC-----------SSTTEEEECCCCCT
T ss_pred cEEEEEcCCChhhhcCcceeEee---cCCCCccEEEEeecCCCCEeecccceeec-----------cCCcEEEEEcCCCC
Confidence 999999974211 13343442 23468999999987644322233321110 01357889999999
Q ss_pred CCCCCceeCCCceEEEEEeeeeCCCCCccceeEEEeccCchhh
Q 013014 277 GNSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGI 319 (451)
Q Consensus 277 G~SGGPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~ 319 (451)
|.||+|+||.+ .||||+..... ....+.++-+..++.+
T Consensus 148 G~SGsP~~ng~-~IVGvh~G~~~----~~~~N~a~n~~~~~~~ 185 (191)
T 1zyo_A 148 GWSGTPLYSSR-GVVGMHVGFEE----IGKLNRGVNMFYVANY 185 (191)
T ss_dssp TCTTCEEECSS-CEEEEEEEEEE----TTTEEEEECHHHHHHH
T ss_pred CCCCCcEEcCC-eEEEEEeCccc----CCceeeeeehHHHhhh
Confidence 99999999975 78999987532 2346777766666554
No 116
>2qy0_B Complement C1R subcomponent; serine protease, beta barrel, complement pathway like domain, glycoprotein, hydrolase, hydroxylation, immune response; 2.60A {Homo sapiens} SCOP: b.47.1.2
Probab=99.21 E-value=2.2e-10 Score=108.29 Aligned_cols=170 Identities=18% Similarity=0.212 Sum_probs=104.2
Q ss_pred eEEEEEEEcCCCeEEecccccCC-------CCcEEEEeCCC--------cEEEEEEEEEcCC----------CCEEEEEE
Q 013014 152 GSGSGFVWDSKGHVVTNYHVIRG-------ASDIRVTFADQ--------SAYDAKIVGFDQD----------KDVAVLRI 206 (451)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHVv~~-------~~~i~V~~~dg--------~~~~a~vv~~d~~----------~DlAlLkv 206 (451)
..|+|.+|+++ +|||+|||+.. ...+.|.+... ..+..+-+..|+. +||||||+
T Consensus 22 ~~CgGtLIs~~-~VLTAAHC~~~~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~~DIALl~L 100 (242)
T 2qy0_B 22 GRGGGALLGDR-WILTAAHTLYPKEHEAQSNASLDVFLGHTNVEELMKLGNHPIRRVSVHPDYRQDESYNFEGDIALLEL 100 (242)
T ss_dssp SEEEEEEETTT-EEEECHHHHSCSSCCC----CCEEEESCSBHHHHHHHCCCCEEEEEECTTCCTTCSSCCTTCCEEEEE
T ss_pred CCEEEEEEeCC-EEEEcHHhccccccccCCCceEEEEEeeccccccccccceeEEEEEECCCCccCcCCCCCCcEEEEEE
Confidence 46999999987 99999999973 23456666432 2334555555543 39999999
Q ss_pred cCCC---CCCcceecCCCCC-CCCCcEEEEeeCCCCCC---CceEEeEEeeeeeeeccC-----C-CCCCcccEEEE---
Q 013014 207 DAPK---DKLRPIPIGVSAD-LLVGQKVYAIGNPFGLD---HTLTTGVISGLRREISSA-----A-TGRPIQDVIQT--- 270 (451)
Q Consensus 207 ~~~~---~~~~~l~l~~s~~-~~~G~~V~~iG~p~g~~---~~~~~G~Vs~~~~~~~~~-----~-~~~~~~~~i~~--- 270 (451)
+.+. ....|+.|..... +..|+.+++.||..... .......+.-+....+.. . .......++..
T Consensus 101 ~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~Ca~~~ 180 (242)
T 2qy0_B 101 ENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFGVMEEKIAHDLRFVRLPVANPQACENWLRGKNRMDVFSQNMFCAGHP 180 (242)
T ss_dssp SSCCCCBTTBCCCBCCCSGGGGCTTCEEEEEECCCCSSSCCSBCEEEEEEBCCHHHHHHHHHHTTCCCCCCTTEEEESCT
T ss_pred CCCCcCCCCcceeecCCCccccCCCCeEEEEeeccCCCcCCccceEEEEEEeCHHHHHHHhccccccccCCCCEEeccCC
Confidence 8764 2456777754332 46799999999875432 223333333222211110 0 00011234443
Q ss_pred --cccCCCCCCCCceeCCC---c--eEEEEEeeeeCCCCCccceeEEEeccCchhhHHHhhh
Q 013014 271 --DAAINPGNSGGPLLDSS---G--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (451)
Q Consensus 271 --d~~i~~G~SGGPlvd~~---G--~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (451)
....+.|+|||||+..+ + .++||+++... ++. +.+....+....+||++.++
T Consensus 181 ~~~~~~C~GDSGgPl~~~~~~~~~~~l~Gi~S~g~~-C~~--~~~vyt~V~~y~~WI~~~~~ 239 (242)
T 2qy0_B 181 SLKQDACQGDSGGVFAVRDPNTDRWVATGIVSWGIG-CSR--GYGFYTKVLNYVDWIKKEME 239 (242)
T ss_dssp TCCCBCCTTCTTCEEEEECTTTCCEEEEEEEEECSS-SSS--SCEEEEEGGGGHHHHHHHTT
T ss_pred CCCCccccCCCCCcEEEEECCCCeEEEEEEEEECCC-cCC--CCcEEEEHHHHHHHHHHHhh
Confidence 23578999999998532 2 59999998643 332 24677888888888887654
No 117
>2f9n_A Alpha I tryptase; serine proteinase, trypsin-like, difucosylation, hydrolase-hydrolase inhibitor complex; HET: AR7 NAG FUC; 1.60A {Homo sapiens} PDB: 2f9o_A* 2f9p_A* 1lto_A 2fpz_A* 2bm2_A* 2fs8_A* 2fs9_A* 2fww_A* 2fxr_A* 2gdd_A* 2za5_A* 3v7t_A* 4a6l_A* 1a0l_A* 2zec_A* 2zeb_A*
Probab=99.20 E-value=2.9e-10 Score=107.83 Aligned_cols=172 Identities=15% Similarity=0.189 Sum_probs=106.7
Q ss_pred eEEEEEEEcCCCeEEecccccCC----CCcEEEEeCC------CcEEEEEEEEEcCC-------CCEEEEEEcCCC---C
Q 013014 152 GSGSGFVWDSKGHVVTNYHVIRG----ASDIRVTFAD------QSAYDAKIVGFDQD-------KDVAVLRIDAPK---D 211 (451)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHVv~~----~~~i~V~~~d------g~~~~a~vv~~d~~-------~DlAlLkv~~~~---~ 211 (451)
..|+|.+|+++ +|||+|||+.. ...+.|.+.+ ++.+..+-+..|++ +||||||++.+. .
T Consensus 27 ~~CgGtLIs~~-~VLTAAHC~~~~~~~~~~~~v~~g~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~~~~ 105 (245)
T 2f9n_A 27 HFCGGSLIHPQ-WVLTAAHCVGPDVKDLATLRVQLREQHLYYQDQLLPVSRIIVHPQFYIIQTGADIALLELEEPVNISS 105 (245)
T ss_dssp EEEEEEEEETT-EEEECGGGGCSSCCCGGGEEEECSCSBTTTTCCCBCEEEEEECTTCCSSCCTTCCEEEEESSCCCCCS
T ss_pred eEEEEEEeeCC-EEEECHHhCCCCCCCcceEEEEeCCcccccCceEEEEEEEEECCCccCCCCCCcEEEEEeCCCCcCCC
Confidence 47999999987 99999999953 3457777643 23455565666654 499999998764 2
Q ss_pred CCcceecCCC-CCCCCCcEEEEeeCCCCCCC-------ceEEeEEeeeeeeecc--CCC--------CCCcccEEEE---
Q 013014 212 KLRPIPIGVS-ADLLVGQKVYAIGNPFGLDH-------TLTTGVISGLRREISS--AAT--------GRPIQDVIQT--- 270 (451)
Q Consensus 212 ~~~~l~l~~s-~~~~~G~~V~~iG~p~g~~~-------~~~~G~Vs~~~~~~~~--~~~--------~~~~~~~i~~--- 270 (451)
...|+.|... ..+..|+.++++||...... ......+.-+....+. +.. ......++..
T Consensus 106 ~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~Ca~~~ 185 (245)
T 2f9n_A 106 RVHTVMLPPASETFPPGMPCWVTGWGDVDNDEPLPPPFPLKQVKVPIMENHICDAKYHLGAYTGDDVRIIRDDMLCAGNS 185 (245)
T ss_dssp SSCCCBCCCTTCCCCTTCCEEEEESCCSBTTBCCCTTCBCEEEECCEECHHHHHHHHHTTCCSCTTSCCSCTTEEEECCS
T ss_pred CccccCCCCcccCCCCCCEEEEEEeCCCCCCCCCCccccceEEEEEEcCHHHhhhhhcccccccccccccccccEeecCC
Confidence 3567777543 34568999999998743211 1222222222111110 000 0011233333
Q ss_pred cccCCCCCCCCceeCC-Cc--eEEEEEeeeeCCCCCccceeEEEeccCchhhHHHhhh
Q 013014 271 DAAINPGNSGGPLLDS-SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (451)
Q Consensus 271 d~~i~~G~SGGPlvd~-~G--~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (451)
....+.|+|||||+.. +| .++||+++... ++.....+....+....+||++.++
T Consensus 186 ~~~~C~GDSGgPL~~~~~g~~~l~GI~S~g~~-C~~~~~p~vyt~V~~y~~WI~~~~~ 242 (245)
T 2f9n_A 186 QRDSCQGDSGGPLVCKVNGTWLQAGVVSWGEG-CAQPNRPGIYTRVTYYLDWIHHYVP 242 (245)
T ss_dssp SSBCCTTCTTCEEEEEETTEEEEEEEEEECSS-SSBTTBCEEEEEGGGGHHHHHHHSC
T ss_pred CCCcCCCCCCCceEEEECCEEEEEEEEEeCCC-CCCCCCCeEEEEHHHHHHHHHHHhh
Confidence 2357899999999864 55 59999998642 3323345667788888888877654
No 118
>3id1_A Regulator of sigma E protease; hydrolase, cell inner membrane, cell membrane, membrane, metal-binding, metalloprotease, transmembrane; 1.67A {Escherichia coli k-12} PDB: 2zpl_A
Probab=99.19 E-value=4.2e-11 Score=97.32 Aligned_cols=70 Identities=14% Similarity=0.049 Sum_probs=63.1
Q ss_pred EEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEcCCHHHHHHHHhcCCCCCEEEEEEEECC--eEEEEEEEee
Q 013014 353 LVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDELLLQGIKQP--PVLSDNLRLL 430 (451)
Q Consensus 353 ~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i~~~~dl~~~l~~~~~g~~v~l~v~R~g--~~~~~~v~l~ 430 (451)
+|.+|.++|||+++||++ ||+|++|||++|.++.|+.+.+.....++.+.++|.|+| +.+++++++.
T Consensus 5 ~V~~V~~~spA~~aGl~~-----------GD~I~~ing~~v~~~~d~~~~l~~~~~~~~v~l~v~R~g~~~~~~~~l~l~ 73 (95)
T 3id1_A 5 VVGEIAANSIAAEAQIAP-----------GTELKAVDGIETPDWDAVRLQLVDKIGDESTTITVAPFGSDQRRDVKLDLR 73 (95)
T ss_dssp BEEEECTTSHHHHTTCCT-----------TCEEEEETTEECSSHHHHHHHHHHTTTCSEEEEEEECTTCCCCEEEEEECT
T ss_pred EEEeeCCCCHHHHcCCCC-----------CCEEEEECCEECCCHHHHHHHHHHhcCCCcEEEEEEECCCCceEEEEEEcc
Confidence 588999999999999999 999999999999999999999987666689999999998 5678888887
Q ss_pred ecC
Q 013014 431 WSE 433 (451)
Q Consensus 431 ~~~ 433 (451)
.+.
T Consensus 74 ~~~ 76 (95)
T 3id1_A 74 HWA 76 (95)
T ss_dssp TCC
T ss_pred ccc
Confidence 664
No 119
>2bdy_A Thrombin; thrombin, complex structure, hydrolase, hydrolase-hydrolase complex; HET: TYS UNB; 1.61A {Homo sapiens} SCOP: b.47.1.2 PDB: 3k65_B 1doj_A* 1hag_E* 1xm1_A* 1nu9_A* 3sqe_E 3sqh_E 1jwt_A* 1d9i_A* 1d6w_A* 1g37_A* 1nm6_A* 1nt1_A* 1sl3_A* 1ta2_A* 1ta6_A* 1z71_A* 1zgi_A* 1zgv_A* 1zrb_A* ...
Probab=99.19 E-value=7.2e-10 Score=107.97 Aligned_cols=173 Identities=17% Similarity=0.211 Sum_probs=105.9
Q ss_pred CeEEEEEEEcCCCeEEecccccCC--------CCcEEEEeCC----------CcEEEEEEEEEcC--------CCCEEEE
Q 013014 151 QGSGSGFVWDSKGHVVTNYHVIRG--------ASDIRVTFAD----------QSAYDAKIVGFDQ--------DKDVAVL 204 (451)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHVv~~--------~~~i~V~~~d----------g~~~~a~vv~~d~--------~~DlAlL 204 (451)
...|.|.+|+++ +|||+|||+.. ...+.|++.. .+.+..+-+..|+ .+|||||
T Consensus 55 ~~~CgGsLIs~~-~VLTAAHC~~~~~~~~~~~~~~~~V~~G~~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~DIALl 133 (289)
T 2bdy_A 55 ELLCGASLISDR-WVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALM 133 (289)
T ss_dssp EEEEEEEECSSS-EEEECGGGTEEGGGTEECCGGGEEEEESCCBSSSCCTTTCEEEEEEEEEECTTCBTTTTCBTCCEEE
T ss_pred CEEEEEEEecCC-EEEEcHHhcccCccccccCcccEEEEEccccccccCCCcceeeeeEEEEECCCCCCCCCCCCeEEEE
Confidence 357999999976 99999999942 3457777642 1234455455554 2599999
Q ss_pred EEcCCC---CCCcceecCCCCC----CCCCcEEEEeeCCCCCC-----------CceEEeEEeeeeeeeccCCC-CCCcc
Q 013014 205 RIDAPK---DKLRPIPIGVSAD----LLVGQKVYAIGNPFGLD-----------HTLTTGVISGLRREISSAAT-GRPIQ 265 (451)
Q Consensus 205 kv~~~~---~~~~~l~l~~s~~----~~~G~~V~~iG~p~g~~-----------~~~~~G~Vs~~~~~~~~~~~-~~~~~ 265 (451)
|++.+. ..+.|+.|..... +..|..+.+.||..... .......+.-+....+.... .....
T Consensus 134 ~L~~pv~~~~~v~picLp~~~~~~~~~~~g~~~~v~GWG~~~~~~~~~~~~~~~~~L~~~~v~i~~~~~C~~~~~~~i~~ 213 (289)
T 2bdy_A 134 KLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVERPVCKDSTRIRITD 213 (289)
T ss_dssp EESSCCCCBTTBCCCBCCCHHHHHHHCCTTCEEEEEESSCSSCC-------CCCSBCEEEEEEBCCHHHHHHTCSSCCCT
T ss_pred EECCccccCCcccccCCCCccccccccCCCCEEEEECCCcCCCccccCccccccccceEEEEEEECHHHhhccccCcCCC
Confidence 998764 2356777753321 45799999999864321 12222222222221111100 01113
Q ss_pred cEEEE--------cccCCCCCCCCceeCC---Cc--eEEEEEeeeeCCCCCccceeEEEeccCchhhHHHhhh
Q 013014 266 DVIQT--------DAAINPGNSGGPLLDS---SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (451)
Q Consensus 266 ~~i~~--------d~~i~~G~SGGPlvd~---~G--~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (451)
.++-. ....+.|+|||||+-. +| .++||++++. .++.....+...-+....+||++.++
T Consensus 214 ~~iCag~~~~~~~~~~~C~GDSGGPLv~~~~~~~~~~l~GIvS~g~-~C~~~~~p~vyt~V~~y~~WI~~~i~ 285 (289)
T 2bdy_A 214 NMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGE-GCDRDGKYGFYTHVFRLKKWIQKVID 285 (289)
T ss_dssp TEEEECCCGGGCCCCBCCTTCTTCEEEEECTTTCCEEEEEEEEECS-SSSCTTCCEEEEETGGGHHHHHHHHH
T ss_pred CEEeccCCCCCCCCCccCCCCCccceEEEECCCCCEEEEEEEEECC-CCCCCCCCEEEEEHHHHHHHHHHHHH
Confidence 44444 2357899999999853 34 5999999864 34433445677888888888887654
No 120
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=99.18 E-value=6.5e-11 Score=115.18 Aligned_cols=187 Identities=16% Similarity=0.083 Sum_probs=115.2
Q ss_pred HhCCceEEEEeeeeccCccccccccccCeEEEEEEEcCCCeEEecccccCCCCcEEEEeCC------CcEEEEEEEEEcC
Q 013014 124 ENTPSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD------QSAYDAKIVGFDQ 197 (451)
Q Consensus 124 ~~~~SVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHVv~~~~~i~V~~~d------g~~~~a~vv~~d~ 197 (451)
..-|-.|.|... .....++|.+|+++ +|||+|||+.+...+.|.+.. ++.+..+-+..|+
T Consensus 62 ~~~Pw~v~l~~~-------------~~~~~CgGtLI~~~-~VLTAAHC~~~~~~~~V~~G~~~~~~~~~~~~v~~i~~Hp 127 (283)
T 3f1s_B 62 QDLPWQVKLTNS-------------EGKDFCGGVIIREN-FVLTTAKCSLLHRNITVKTYFNRTSQDPLMIKITHVHVHM 127 (283)
T ss_dssp -CCTTEEEEECT-------------TSCEEEEEEEEETT-EEEECHHHHTSCSSCEEEECTTC-CCCCEEEEEEEEEECT
T ss_pred cccCCEEEEEec-------------CCCeeeccEEecCC-EEEEcHHhcCccCceEEEEeeeeCCCCcEEEEeEEEEECC
Confidence 346777877531 12457999999986 999999999888788887752 3456666666665
Q ss_pred C-------CCEEEEEEcCCC---CCCcceecCCCC----CCCCCcEEEEeeCCCCCC---CceEEeEEeeeeeeeccCC-
Q 013014 198 D-------KDVAVLRIDAPK---DKLRPIPIGVSA----DLLVGQKVYAIGNPFGLD---HTLTTGVISGLRREISSAA- 259 (451)
Q Consensus 198 ~-------~DlAlLkv~~~~---~~~~~l~l~~s~----~~~~G~~V~~iG~p~g~~---~~~~~G~Vs~~~~~~~~~~- 259 (451)
. +||||||++.+. ..+.|+.|.... .+..|+.+++.||..... .......+.-+........
T Consensus 128 ~y~~~~~~nDIALl~L~~pv~~~~~v~picLp~~~~~~~~~~~~~~~~v~GwG~~~~~~~~~L~~~~v~~~~~~~C~~~~ 207 (283)
T 3f1s_B 128 RYDADAGENDLSLLELEWPIQCPGAGLPVCTPEKDFAEHLLIPRTRGLLSGWARNGTDLGNSLTTRPVTLVEGEECGQVL 207 (283)
T ss_dssp TCBTTTTBTCCEEEEESSCCCTTTTCCCCBCCCHHHHHHTTTTTSCEEEEECBCC-------CEEEEEEEECHHHHHHHH
T ss_pred CCCCCCCCCCEEEEEeCCcccCCCCEEeEECCCCccccccccCCCEEEEEECCCCCCCCCceeeEEEEeEeCHHHHhhhh
Confidence 3 499999998754 245677775432 356799999999865211 1122222222221111000
Q ss_pred CCCCcccEEEE--cccCCCCCCCCceeCC-Cce--EEEEEeeeeCCCCCccceeEEEeccCchhhHHHhhhc
Q 013014 260 TGRPIQDVIQT--DAAINPGNSGGPLLDS-SGS--LIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKF 326 (451)
Q Consensus 260 ~~~~~~~~i~~--d~~i~~G~SGGPlvd~-~G~--VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~~ 326 (451)
.......++-. ......|+|||||+.. +|+ ++||+++.. +......+...-+....+||++.++.
T Consensus 208 ~~~~~~~~~Ca~~~~~~~~gDSGgPlv~~~~~~~~l~GIvS~g~--c~~~~~p~vyt~V~~y~~WI~~~~~~ 277 (283)
T 3f1s_B 208 NVTVTTRTYCERSSVAAMHWMDGSVVTREHRGSWFLTGVLGSQP--VGGQAHMVLVTKVSRYSLWFKQIMNA 277 (283)
T ss_dssp TSCCCTTEEEEECSSCGGGBCTTCEEEEECSSCEEEEEEECCCS--GGGCSSEEEEEEGGGGHHHHHHHHTC
T ss_pred cCCCCCCeEcccCCCCCCCCCCCCcEEEEECCEEEEEEEEEeCC--CCCCCcceEEEEhHHhHHHHHHHhhc
Confidence 00011233332 1223468999999863 555 999998742 22233456778888888998887654
No 121
>1uit_A Human discs large 5 protein; PDZ domain, HDLG5, maguk family, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.17 E-value=9.4e-12 Score=104.99 Aligned_cols=90 Identities=22% Similarity=0.254 Sum_probs=74.2
Q ss_pred hhhccccccccc----cceeccchhhhhhCc-------cceEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCE
Q 013014 323 LVKFGKVTRPIL----GIKFAPDQSVEQLGV-------SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGK 391 (451)
Q Consensus 323 l~~~g~~~~~~l----Gi~~~~~~~~~~~~~-------~Gv~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~ 391 (451)
++++|++.++|+ |+.+.... ..+|+ .|++|.+|.+++||+++||++ ||+|++|||+
T Consensus 6 ~~~~g~v~r~~l~~~~~v~l~~~~--~~lG~~~~~~~~~gv~V~~V~~~spA~~aGL~~-----------GD~Il~vng~ 72 (117)
T 1uit_A 6 SGGERRKDRPYVEEPRHVKVQKGS--EPLGISIVSGEKGGIYVSKVTVGSIAHQAGLEY-----------GDQLLEFNGI 72 (117)
T ss_dssp CCCCCCSCCCCSCCCEEEEEECSS--CCCCEEEEECTTSCEEEEEECTTSHHHHHTCCT-----------TCEECEETTE
T ss_pred ccccCccccccCCCCEEEEEEeCC--CCccEEEEccCCCCEEEEEECCCCHHHHcCCCC-----------CCEEEEECCE
Confidence 456789999999 88877532 22221 689999999999999999999 9999999999
Q ss_pred EcCCHHHHHHHHhcCCCCCEEEEEEEECCeEEEE
Q 013014 392 KVSNGSDLYRILDQCKVGDELLLQGIKQPPVLSD 425 (451)
Q Consensus 392 ~i~~~~dl~~~l~~~~~g~~v~l~v~R~g~~~~~ 425 (451)
+|.++.++...+....+|+++.++|.|+++..++
T Consensus 73 ~v~~~~~~~~~~~~~~~g~~v~l~v~r~~~~~~~ 106 (117)
T 1uit_A 73 NLRSATEQQARLIIGQQCDTITILAQYNPHVHQL 106 (117)
T ss_dssp ETTTCCHHHHHHHTTSCCSEEEEEECCCSCCCCC
T ss_pred ECCCCCHHHHHHHHHcCCCeEEEEEEECCchhhh
Confidence 9999988877765556899999999999876543
No 122
>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens}
Probab=99.17 E-value=1.8e-11 Score=98.10 Aligned_cols=73 Identities=16% Similarity=0.233 Sum_probs=62.9
Q ss_pred cccccceeccchhhhhhCccceEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEc--CCHHHHHHHHhcCCC
Q 013014 331 RPILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKV--SNGSDLYRILDQCKV 408 (451)
Q Consensus 331 ~~~lGi~~~~~~~~~~~~~~Gv~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i--~~~~dl~~~l~~~~~ 408 (451)
.+++|+.+.... .|++|.+|.++|||+++||++ ||+|++|||++| .++.++..++...++
T Consensus 16 ~~~lG~~~~~~~-------~g~~V~~V~~~spA~~aGl~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~~~~ 77 (90)
T 2eaq_A 16 SLDFGFTIKWDI-------PGIFVASVEAGSPAEFSQLQV-----------DDEIIAINNTKFSYNDSKEWEEAMAKAQE 77 (90)
T ss_dssp SSCCSEEEEEET-------TEEEEEEECTTSHHHHTTCCT-----------TCEEEEETTEECCTTCHHHHHHHHHHHHH
T ss_pred CCcccEEEEecC-------CCEEEEEECCCChHHHcCCCC-----------CCEEEEECCEEccCCCHHHHHHHHHhcCC
Confidence 357787775322 689999999999999999999 999999999999 899999999886557
Q ss_pred CCEEEEEEEECCe
Q 013014 409 GDELLLQGIKQPP 421 (451)
Q Consensus 409 g~~v~l~v~R~g~ 421 (451)
|+++.++|.|+|+
T Consensus 78 g~~v~l~v~R~g~ 90 (90)
T 2eaq_A 78 TGHLVMDVRRYGK 90 (90)
T ss_dssp HTEEEEEEEEEC-
T ss_pred CCEEEEEEEeCCC
Confidence 8999999999874
No 123
>1zjk_A Mannan-binding lectin serine protease 2; beta barrel, modular protein, hydrolase; 2.18A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1 PDB: 1q3x_A
Probab=99.17 E-value=1.2e-09 Score=111.54 Aligned_cols=172 Identities=16% Similarity=0.175 Sum_probs=107.7
Q ss_pred EEEEEEEcCCCeEEecccccCC----CCcEEEEeCC-------CcEEEEEEEEEcC--------CCCEEEEEEcCCC---
Q 013014 153 SGSGFVWDSKGHVVTNYHVIRG----ASDIRVTFAD-------QSAYDAKIVGFDQ--------DKDVAVLRIDAPK--- 210 (451)
Q Consensus 153 ~GSGfiI~~~G~ILT~aHVv~~----~~~i~V~~~d-------g~~~~a~vv~~d~--------~~DlAlLkv~~~~--- 210 (451)
.+.|.+|+++ +|||+|||+.+ ...+.|++.. .+.+..+-+..|+ .+||||||++.+.
T Consensus 184 ~CgGsLIs~~-~VLTAAHC~~~~~~~~~~~~V~~G~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~DIALl~L~~~v~~~ 262 (403)
T 1zjk_A 184 TAAGALLYDN-WVLTAAHAVYEQKHDASALDIRMGTLKRLSPHYTQAWSEAVFIHEGYTHDAGFDNDIALIKLNNKVVIN 262 (403)
T ss_dssp CEEEEEETTT-EEEECHHHHGGGTTCSTTEEEEESCSBTTCSCCEEEEEEEEEECTTCCTTSCCTTCCEEEEESSCCCCB
T ss_pred ceEEEEecCC-EEEEcHHhCCCCCCCcceEEEEccccccCCCCceEEeEEEEEECCCCCCCCCCcccEEEEEeCCcCcCC
Confidence 5999999976 99999999965 4567777643 2345555555554 3599999998764
Q ss_pred CCCcceecCCCCC---CCCCcEEEEeeCCCCCC----CceEEeEEeeeeeeecc--CCC-----CCCcccEEEE-----c
Q 013014 211 DKLRPIPIGVSAD---LLVGQKVYAIGNPFGLD----HTLTTGVISGLRREISS--AAT-----GRPIQDVIQT-----D 271 (451)
Q Consensus 211 ~~~~~l~l~~s~~---~~~G~~V~~iG~p~g~~----~~~~~G~Vs~~~~~~~~--~~~-----~~~~~~~i~~-----d 271 (451)
..+.|+.|..... +..|+.+++.||..... .......+.-+...... +.. ......++-. .
T Consensus 263 ~~v~picLp~~~~~~~~~~~~~~~v~GWG~~~~~~~~~~L~~~~v~v~~~~~C~~~~~~~~~~~~~i~~~~~Cag~~~~~ 342 (403)
T 1zjk_A 263 SNITPICLPRKEAESFMRTDDIGTASGWGLTQRGFLARNLMYVDIPIVDHQKCTAAYEKPPYPRGSVTANMLCAGLESGG 342 (403)
T ss_dssp TTBCCCBCCCGGGGGGSSTTCEEEEEESCTTSSSCCCSBCEEEEEEEECHHHHHHHTTSSSCCSSCSCTTEEEECCSSCC
T ss_pred CceecccCCCcccccccCCCCeEEEEcCCcCCCCccCcccEEEEEeEeCHHHHhhhhhccccccCcCCCCeEeeccCCCC
Confidence 2466777754322 56799999999875432 22333333322221111 100 0112344443 2
Q ss_pred ccCCCCCCCCceeCC---Cc--eEEEEEeeeeCCCCCccceeEEEeccCchhhHHHhhh
Q 013014 272 AAINPGNSGGPLLDS---SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (451)
Q Consensus 272 ~~i~~G~SGGPlvd~---~G--~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (451)
...+.|+|||||+-. +| .++||+++....++.....+....+....+||++.++
T Consensus 343 ~~~C~GDSGGPL~~~~~~~~~~~l~GIvS~g~~~C~~~~~p~vyt~V~~y~~WI~~~i~ 401 (403)
T 1zjk_A 343 KDSCRGDSGGALVFLDSETERWFVGGIVSWGSMNCGEAGQYGVYTKVINYIPWIENIIS 401 (403)
T ss_dssp TTSCSCSTTCEEEEEETTTTEEEEEEEEEEECSCC--CCCCEEEEEGGGGHHHHHHHHT
T ss_pred CCCCcCCCCccEEEEECCCCcEEEEEEEEECCCCCCCCCCCeEEEEHHHHHHHHHHHHh
Confidence 457899999999853 34 5999999874344433345777888888888887654
No 124
>2zpm_A Regulator of sigma E protease; metalloproteinase, membrane protein, PDZ domain, hydrolase, inner membrane, membrane, metal-binding; HET: MLY MSE; 0.98A {Escherichia coli} PDB: 3id2_A 3id3_A 3id4_A
Probab=99.14 E-value=8.9e-11 Score=94.21 Aligned_cols=69 Identities=26% Similarity=0.300 Sum_probs=62.4
Q ss_pred eEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEcCCHHHHHHHHhcCCCCCEEEEEEEECCeEEEEEEEeee
Q 013014 352 VLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDELLLQGIKQPPVLSDNLRLLW 431 (451)
Q Consensus 352 v~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i~~~~dl~~~l~~~~~g~~v~l~v~R~g~~~~~~v~l~~ 431 (451)
++|.++.+++||+++||++ ||+|++|||+++.++.|+...+... +|+++.++|.|+|+.+++++++..
T Consensus 6 ~~V~~v~~~spA~~aGl~~-----------GD~I~~ing~~v~~~~~~~~~l~~~-~g~~v~l~v~R~g~~~~~~v~~~~ 73 (91)
T 2zpm_A 6 PVLENVQPNSAASXAGLQA-----------GDRIVXVDGQPLTQWVTFVMLVRDN-PGXSLALEIERQGSPLSLTLIPES 73 (91)
T ss_dssp CBCSEECTTSHHHHTTCCT-----------TCEEEEETTEECCCHHHHHHHHHHC-TTCCEEEEEEETTEEEEEEECCEE
T ss_pred eEEEEECCCChHHhcCCCC-----------CCEEEEECCeEcCCHHHHHHHHhcC-CCCeEEEEEEECCeEEEEEEEEee
Confidence 4688899999999999999 9999999999999999999999874 789999999999999888888754
Q ss_pred c
Q 013014 432 S 432 (451)
Q Consensus 432 ~ 432 (451)
.
T Consensus 74 ~ 74 (91)
T 2zpm_A 74 X 74 (91)
T ss_dssp E
T ss_pred e
Confidence 3
No 125
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=99.13 E-value=1.2e-09 Score=107.84 Aligned_cols=183 Identities=16% Similarity=0.081 Sum_probs=113.1
Q ss_pred CCceEEEEeeeeccCccccccccccCeEEEEEEEcCCCeEEecccccCCCCcEEEEeCC------CcEEEEEEEEEcCC-
Q 013014 126 TPSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD------QSAYDAKIVGFDQD- 198 (451)
Q Consensus 126 ~~SVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHVv~~~~~i~V~~~d------g~~~~a~vv~~d~~- 198 (451)
-|-+|.|... .....++|.+|+++ +|||+|||+.+...+.|++.. ++.+..+-+..|+.
T Consensus 105 ~Pw~v~l~~~-------------~~~~~CgGtLIs~~-~VLTAAHC~~~~~~~~V~~G~~~~~~~~~~~~v~~i~~Hp~y 170 (317)
T 3h5c_B 105 LPWQVKLTNS-------------EGKDFCGGVIIREN-FVLTTAKCSLLHRNITVKTYFNRTSQDPLMIKITHVHVHMRY 170 (317)
T ss_dssp CTTEEEEECS-------------SSCEEEEEEEEETT-EEEECHHHHHSCSSCEEEECTTSCTTSCEEEEEEEEEECTTC
T ss_pred CCcEEEEecc-------------CCceeeeeEEeeCC-EEEEChHhcCcCCceEEEEeeecCCCCcEEEEeeEEEECCCC
Confidence 5677777531 12457999999987 999999999887777887742 34566666667653
Q ss_pred ------CCEEEEEEcCCC---CCCcceecCCCC----CCCCCcEEEEeeCCCCCC---CceEEeEEeeeeeeeccCC-CC
Q 013014 199 ------KDVAVLRIDAPK---DKLRPIPIGVSA----DLLVGQKVYAIGNPFGLD---HTLTTGVISGLRREISSAA-TG 261 (451)
Q Consensus 199 ------~DlAlLkv~~~~---~~~~~l~l~~s~----~~~~G~~V~~iG~p~g~~---~~~~~G~Vs~~~~~~~~~~-~~ 261 (451)
+||||||++.+. ..+.|+.|.... .+..|+.+++.||..... .......+.-+........ ..
T Consensus 171 ~~~~~~~DIALl~L~~pv~~~~~v~picLp~~~~~~~~~~~~~~~~v~GwG~~~~~~~~~L~~~~v~~~~~~~C~~~~~~ 250 (317)
T 3h5c_B 171 DADAGENDLSLLELEWPIQCPGAGLPVCTPEKDFAEHLLIPRTRGLLSGWARNGTDLGNSLTTRPVTLVEGEECGQVLNV 250 (317)
T ss_dssp BTTTTBSCCEEEEESSCCCTTTSCCCCBCCCHHHHHHTTTTTSCEEEEBCCTTCCSSSCCCBCCEEEEECHHHHHHHHTC
T ss_pred CCCCCCCCeEEEEeCCcccCCCCccceeCCCcccccccccCCCeEEEEecCCCCCCCCccceEEEEEEECHHHHhhhhcC
Confidence 499999998754 245677775432 356799999999864211 1122222222221111000 00
Q ss_pred CCcccEEEE--cccCCCCCCCCceeCC-Cce--EEEEEeeeeCCCCCccceeEEEeccCchhhHHHhh
Q 013014 262 RPIQDVIQT--DAAINPGNSGGPLLDS-SGS--LIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLV 324 (451)
Q Consensus 262 ~~~~~~i~~--d~~i~~G~SGGPlvd~-~G~--VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~ 324 (451)
.....++-. ......|+|||||+-. +|+ ++||+++.. .......+....+....+||++.+
T Consensus 251 ~~~~~~~Ca~~~~~~~~gDsGgPl~~~~~~~~~l~Gi~S~g~--~~~~~~p~vyt~V~~y~~WI~~~i 316 (317)
T 3h5c_B 251 TVTTRTYCERSSVAAMHWMDGSVVTREHRGSWFLTGVLGSQP--VGGQAHMVLVTKVSRYSLWFKQIM 316 (317)
T ss_dssp CCCTTEEEEECSCCCCCCCTTCEEEEEETTEEEEEEEECCCC--SSCCTTEEEEEEGGGCHHHHHHHH
T ss_pred cCCCceeECCCCCCCcCCCCCCCEEEecCCEEEEEEEEEECC--CCCCCcceEEEEhHHhHHHHHHHh
Confidence 011233322 2234578999999864 455 999998742 233334567778888888887654
No 126
>2b9l_A Prophenoloxidase activating factor; CLIP domain, easter, innate immunity, melanin, immune system binding complex; HET: NAG FUC; 2.00A {Holotrichia diomphalia}
Probab=99.13 E-value=8.1e-10 Score=112.57 Aligned_cols=174 Identities=18% Similarity=0.206 Sum_probs=109.5
Q ss_pred CeEEEEEEEcCCCeEEecccccCCC----CcEEEEeCC-----------CcEEEEEEEEEcCC-------CCEEEEEEcC
Q 013014 151 QGSGSGFVWDSKGHVVTNYHVIRGA----SDIRVTFAD-----------QSAYDAKIVGFDQD-------KDVAVLRIDA 208 (451)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHVv~~~----~~i~V~~~d-----------g~~~~a~vv~~d~~-------~DlAlLkv~~ 208 (451)
...|.|.+|+++ ||||+|||+.+. ..+.|++.. .+.+..+-+..|+. +|||||+++.
T Consensus 161 ~~~CGGsLIs~~-~VLTAAHCv~~~~~~~~~~~V~~G~~~~~~~~~~~~~~~~~V~~ii~Hp~y~~~~~~nDIALL~L~~ 239 (394)
T 2b9l_A 161 QLVCGGSLIAPS-VVLTGAHCVNSYQSNLDAIKIRAGEWDTLTEKERLPYQERKIRQVIIHSNFNPKTVVNDVALLLLDR 239 (394)
T ss_dssp SEEEEEEEEETT-EEEECHHHHGGGTTCGGGEEEEESCCBTTCCCSSSCCEEEEEEEEEECTTCCTTTCTTCCEEEEESS
T ss_pred ceEeeEEEEeCC-EEEeccceecCCCCCcccEEEEeceeeccCCcCCCccEEEEEEEEEECCCCCCCccccceEEEEecC
Confidence 457999999987 999999999753 457787642 13455565666654 5999999987
Q ss_pred CC---CCCcceecCCCCCCCCCcEEEEeeCCCCCC-------CceEEeEEeeeeeeecc--CC---CC---CCcccEEEE
Q 013014 209 PK---DKLRPIPIGVSADLLVGQKVYAIGNPFGLD-------HTLTTGVISGLRREISS--AA---TG---RPIQDVIQT 270 (451)
Q Consensus 209 ~~---~~~~~l~l~~s~~~~~G~~V~~iG~p~g~~-------~~~~~G~Vs~~~~~~~~--~~---~~---~~~~~~i~~ 270 (451)
+. ..+.|+.|........++.+++.||..... .......+.-+...... +. .+ .....++-.
T Consensus 240 pv~~~~~v~PicLp~~~~~~~~~~~~v~GWG~t~~~~~~~~s~~L~~~~v~iv~~~~C~~~~~~~~~~~~~~i~~~~iCA 319 (394)
T 2b9l_A 240 PLVQADNIGTICLPQQSQIFDSTECFASGWGKKEFGSRHRYSNILKKIQLPTVDRDKCQADLRNTRLGLKFVLDQTFVCA 319 (394)
T ss_dssp CCBCCTTCCCCBCCCTTCCCCCSCEEEEECCTTTTTCTTSSCCBCEEEEECEECHHHHHHHHHTTTTCTTCCCCTTEEEE
T ss_pred ccccCCceeeeEcCCcccCccCCEEEEEeccCccCCCCCcccccceEEEEEEECHHHHHHHHhhcccccceecCCCEEEe
Confidence 64 246677776544445678899999874321 12233333322222111 00 00 011233433
Q ss_pred ----cccCCCCCCCCceeCC----Cc--eEEEEEeeeeCCCCCccceeEEEeccCchhhHHHhhhc
Q 013014 271 ----DAAINPGNSGGPLLDS----SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKF 326 (451)
Q Consensus 271 ----d~~i~~G~SGGPlvd~----~G--~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~~ 326 (451)
....+.|+|||||+-. +| .++||++++.. ++....-+...-+...++||++.++.
T Consensus 320 g~~~g~d~C~GDSGGPLv~~~~~~~~~~~lvGIvS~G~~-C~~~~~PgVYT~V~~y~~WI~~~i~~ 384 (394)
T 2b9l_A 320 GGEQGKDTCTGDGGSPLFCPDPRNPSRYMQMGIVAWGIG-CGDENVPGVYANVAHFRNWIDQEMQA 384 (394)
T ss_dssp CCBSSCSCCSSCTTCEEEEEETTEEEEEEEEEEESCTTC-CCBSSSCEEEEEGGGGHHHHHHHHHH
T ss_pred eCCCCCcCCCCCcchhhEEEEcCCCCeEEEEEEEEECCC-CCCCCCCeEEEEHHHhHHHHHHHHHh
Confidence 2457899999999852 23 69999998642 44333456777888888888876654
No 127
>4f4o_C Haptoglobin; globin fold, serine protease fold, complement control protei haemoglobin scavenging, oxygen storage-transport complex; HET: HEM NAG FUC; 2.90A {Sus scrofa}
Probab=99.12 E-value=1.5e-09 Score=108.63 Aligned_cols=172 Identities=13% Similarity=0.154 Sum_probs=109.1
Q ss_pred CeEEEEEEEcCCCeEEecccccCCCC-----------cEEEEeCCCcEEEEEEEEEcCC---CCEEEEEEcCCC---CCC
Q 013014 151 QGSGSGFVWDSKGHVVTNYHVIRGAS-----------DIRVTFADQSAYDAKIVGFDQD---KDVAVLRIDAPK---DKL 213 (451)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHVv~~~~-----------~i~V~~~dg~~~~a~vv~~d~~---~DlAlLkv~~~~---~~~ 213 (451)
...+.|.+|+++ ||||+|||+.... ...+.....+.+..+-+..||+ +||||||++.+. ...
T Consensus 125 ~~~CGGsLIs~~-~VLTAAHCv~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~HP~y~~nDIALlkL~~~v~~~~~v 203 (347)
T 4f4o_C 125 NLTSGATLINEQ-WLLTTAKNLRLGHKNDTKAKDIAPTLRLYVGKKQEVEIEKVIFHPDNSTVDIGLIKLKQKVPVNERV 203 (347)
T ss_dssp CCEEECCBCSSS-EEEECHHHHTTTSCTTCCHHHHGGGCEEEETTTEEECEEEEEECSCTTTCCCEEEEESSCCCCSSSC
T ss_pred CEEEEEEEEcCC-EEEeCcccccCCCCCcceEEeeeeeeeecCCCeEEEEEEEEEECcCCCCCCEEEEEECCCccCCCce
Confidence 457999999876 9999999996422 2344555566777777777875 599999998754 346
Q ss_pred cceecCCCCCCCCCcEEEEeeCCCCCCC----ceEEeEEeeeeeeecc--CC----------------CCCCcccEEEE-
Q 013014 214 RPIPIGVSADLLVGQKVYAIGNPFGLDH----TLTTGVISGLRREISS--AA----------------TGRPIQDVIQT- 270 (451)
Q Consensus 214 ~~l~l~~s~~~~~G~~V~~iG~p~g~~~----~~~~G~Vs~~~~~~~~--~~----------------~~~~~~~~i~~- 270 (451)
.|+.|........|+..++.||...... ......+.-+...... +. .......++-.
T Consensus 204 ~PicLp~~~~~~~g~~~~v~GWG~~~~~~~s~~L~~~~v~iv~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iCAG 283 (347)
T 4f4o_C 204 MPICLPSKDYVNVGLVGYVSGWGRNANLNFTEHLKYVMLPVADQEKCVQYYEGSTVPEKKTPKSPVGVQPILNEHTFCAG 283 (347)
T ss_dssp CCCBCCSSCCCCTTCEEEEEECSBCTTSSBCSSCEEEEEEEECHHHHHHHHSSCSSGGGCCCCCSSSSCCCCSTTEEEEC
T ss_pred eeeecCccccCCCCcEEEEeccccCCCCCCCccceEEEEEEeCHHHHHHHhccccccccccccccccccccccCCeEEec
Confidence 7888866666788999999998643221 2223333222221110 00 00011233433
Q ss_pred ----cccCCCCCCCCceeC---CCce--EEEEEeeeeCCCCCccceeEEEeccCchhhHHHhhh
Q 013014 271 ----DAAINPGNSGGPLLD---SSGS--LIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (451)
Q Consensus 271 ----d~~i~~G~SGGPlvd---~~G~--VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (451)
....+.|+|||||+- .+|+ ++||+|++.. ++. ...+...-+....+||++.+.
T Consensus 284 ~~~~~~d~C~GDSGGPLv~~~~~~~~~~lvGIvS~G~~-C~~-~~pgVYTrVs~y~~WI~~~i~ 345 (347)
T 4f4o_C 284 LSKYQEDTCYGDAGSAFAVHDKDDDTWYAAGILSFDKS-CRT-AEYGVYVRVTSILDWIQTTIA 345 (347)
T ss_dssp CCTTCCCCCTTCTTCEEEEEETTTTEEEEEEEEEECCC-TTT-SSCEEEEEHHHHHHHHHHHHT
T ss_pred CCCCCCCCCCCCCCcceEEEeCCCCEEEEEEEEEeCCC-CCC-CCCeEEEEHHHHHHHHHHHHH
Confidence 234678999999973 2443 9999998643 332 235666777778888887654
No 128
>2vnt_A Urokinase-type plasminogen activator; UPA, inhibitor complex, hydrolase; HET: QGG; 2.2A {Homo sapiens}
Probab=99.11 E-value=6.9e-09 Score=99.86 Aligned_cols=189 Identities=17% Similarity=0.181 Sum_probs=111.0
Q ss_pred CCceEEEEeeeeccCccccccccccCeEEEEEEEcCCCeEEecccccCCC---CcEEEEeC---------CCcEEEEEEE
Q 013014 126 TPSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKGHVVTNYHVIRGA---SDIRVTFA---------DQSAYDAKIV 193 (451)
Q Consensus 126 ~~SVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHVv~~~---~~i~V~~~---------dg~~~~a~vv 193 (451)
-|-.|.|....... .....|.|.+|+++ ||||+|||+.+. ..+.|... .+..+..+.+
T Consensus 35 ~Pw~v~l~~~~~~~---------~~~~~CgGsLIs~~-~VLTAAHCv~~~~~~~~~~v~~g~~~~~~~~~~~~~~~v~~i 104 (276)
T 2vnt_A 35 QPWFAAIYRRHRGG---------SVTYVCGGSLMSPC-WVISATHCFIDYPKKEDYIVYLGRSRLNSNTQGEMKFEVENL 104 (276)
T ss_dssp STTEEEEEEECSSS---------CEEEEEEEEEEETT-EEEECGGGTTTCCCGGGEEEEESCCBSSSCCTTCEEEEEEEE
T ss_pred CCcEEEEEEecCCC---------cceeEEEEEEeeCC-EEEECcccccCCCCCccEEEEeeeeeccCCCCceEEEEEEEE
Confidence 47788876432111 11347999999987 999999999753 34555542 2345666666
Q ss_pred EEcCC---------CCEEEEEEcCCC-------CCCcceecCCC-CCCCCCcEEEEeeCCCCCCC------ceEEeEEee
Q 013014 194 GFDQD---------KDVAVLRIDAPK-------DKLRPIPIGVS-ADLLVGQKVYAIGNPFGLDH------TLTTGVISG 250 (451)
Q Consensus 194 ~~d~~---------~DlAlLkv~~~~-------~~~~~l~l~~s-~~~~~G~~V~~iG~p~g~~~------~~~~G~Vs~ 250 (451)
..|+. .|||+|+++.+. ....|+.|... ..+..|+.+.+.||.+.... ......+.-
T Consensus 105 ~~Hp~y~~~~~~~~~Diall~L~~~~~~~~~~~~~v~picL~~~~~~~~~~~~~~~~g~G~~~~~~~~~~~~l~~~~~~i 184 (276)
T 2vnt_A 105 ILHKDYSADTLAHHNDIALLKIRSKEGRCAQPSRTIQTICLPSMYNDPQFGTSCEITGFGKENSTDYLYPEQLKMTVVKL 184 (276)
T ss_dssp EECTTCEECSSCEESCCEEEEEECTTSCCCCCCSSCCCCBCCCSSCCCCTTCEEEEEESCCSSTTCSCCCSBCEEEEEEE
T ss_pred EEccccccccccccchhhhhhhhccccccccCcccccccccccccccccccceEEEEEeeccccCCCCcchhheeeeeeE
Confidence 66543 499999997432 23456666433 34677999999998754321 112222222
Q ss_pred eeeeeccCCC---CCCcccEEEE-----cccCCCCCCCCceeCC-Cc--eEEEEEeeeeCCCCCccceeEEEeccCchhh
Q 013014 251 LRREISSAAT---GRPIQDVIQT-----DAAINPGNSGGPLLDS-SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGI 319 (451)
Q Consensus 251 ~~~~~~~~~~---~~~~~~~i~~-----d~~i~~G~SGGPlvd~-~G--~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~ 319 (451)
+......... .......+.. ....+.|+|||||+-. +| .++||+|++.. ++....-+...-+...++|
T Consensus 185 ~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~C~GDSGGPLv~~~~~~~~lvGIvS~G~~-C~~~~~P~vyt~V~~y~~W 263 (276)
T 2vnt_A 185 ISHRECQQPHYYGSEVTTKMLCAADPQWKTDSCQGDSGGPLVCSLQGRMTLTGIVSWGRG-CALKDKPGVYTRVSHFLPW 263 (276)
T ss_dssp ECHHHHTSTTTTGGGSCTTEEEEECTTSCCCCCTTCTTCEEEEEETTEEEEEEEEEECSS-SSBTTBCEEEEEGGGGHHH
T ss_pred ecHHHhhhhhccCcccCccceeeccCCCCCCCCCCCCCCeEEEeeCCeEEEEEEEEECCC-CCCCCCCEEEEEHHHHHHH
Confidence 2221111100 0011122222 2346889999999853 33 49999998643 3323334666788888888
Q ss_pred HHHhhh
Q 013014 320 VDQLVK 325 (451)
Q Consensus 320 l~~l~~ 325 (451)
|++.++
T Consensus 264 I~~~~~ 269 (276)
T 2vnt_A 264 IRSHTK 269 (276)
T ss_dssp HHHHHS
T ss_pred HHHHhh
Confidence 887664
No 129
>3cp7_A Alkaline serine protease Al20; trypsin-like, hydrolase; 1.39A {Nesterenkonia abyssinica}
Probab=99.07 E-value=9.2e-10 Score=103.01 Aligned_cols=151 Identities=17% Similarity=0.178 Sum_probs=87.9
Q ss_pred CCceEEEEeeeeccCccccccccccCeEEEEEEEc---CCCeEEecccccCCC------CcEEEEeC--CC----cEEEE
Q 013014 126 TPSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWD---SKGHVVTNYHVIRGA------SDIRVTFA--DQ----SAYDA 190 (451)
Q Consensus 126 ~~SVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~---~~G~ILT~aHVv~~~------~~i~V~~~--dg----~~~~a 190 (451)
-|.+++|.... . .....|+|.+|+ ++ +|||||||+.+. ..+.+... +. ..+.+
T Consensus 6 ~p~~g~l~~~~-~----------~~~~~CgGslI~s~s~~-~VLTAAHC~~~~~~~~~~~~~~v~~G~~~~~~~~~~~~v 73 (218)
T 3cp7_A 6 SPHIGKVFFST-N----------QGDFVCSANIVASANQS-TVATAGHCLHDGNGGQFARNFVFAPAYDYGESEHGVWAA 73 (218)
T ss_dssp CTTEEEEEEEE-T----------TEEEEEEEEEBCCTTSC-EEEECGGGTBCCTTCBBCEEEEEEETCSSSCCTTCCEEE
T ss_pred CceEEEEEEEc-C----------CCCeEEEEEEEecCCCC-EEEEChHhcCcCCCCeeecCEEEECcccCCCCCccEEEE
Confidence 46778875421 1 123579999998 66 999999999653 24555442 11 13455
Q ss_pred EEEEEc--------CCCCEEEEEEcCC--CC---CCc-ceecCCCCCCCCCcEEEEeeCCCCCC--C-ceEEeEEeeeee
Q 013014 191 KIVGFD--------QDKDVAVLRIDAP--KD---KLR-PIPIGVSADLLVGQKVYAIGNPFGLD--H-TLTTGVISGLRR 253 (451)
Q Consensus 191 ~vv~~d--------~~~DlAlLkv~~~--~~---~~~-~l~l~~s~~~~~G~~V~~iG~p~g~~--~-~~~~G~Vs~~~~ 253 (451)
+-+..| ..+||||||++.+ .. ... ++.|... ...|+.+.+.||+.... . ....-. ..
T Consensus 74 ~~~~~hp~y~~~~~~~~DiAll~L~~~~~~~~~~~v~~~~~l~~~--~~~g~~~~v~GwG~~~~~~~~~l~~C~----~~ 147 (218)
T 3cp7_A 74 EELVTSAEWANRGDFEHDYAFAVLETKGGTTVQQQVGTASPIAFN--QPRGQYYSAYGYPAAAPFNGQELHSCH----GT 147 (218)
T ss_dssp EEEEECHHHHHHCCGGGCCEEEEECCBTTBCHHHHHSCCBCBCCS--CCSSCEEEEEECCCSTTCCSSSCEEEE----EE
T ss_pred EEEEECcccccCCCCcCCEEEEEEeCCCCcChhHhcCcccceeec--CCCCCEEEEEeCCCCCCCCCceeeEee----ee
Confidence 544443 2469999999875 10 122 5555432 24789999999986431 1 111000 00
Q ss_pred eeccCCCCCCcccEEEEcccCCCCCCCCceeCC---CceEEEEEeeee
Q 013014 254 EISSAATGRPIQDVIQTDAAINPGNSGGPLLDS---SGSLIGINTAIY 298 (451)
Q Consensus 254 ~~~~~~~~~~~~~~i~~d~~i~~G~SGGPlvd~---~G~VVGI~s~~~ 298 (451)
..... .. ...+...|+.+.|+|||||+.. .++++||+|+..
T Consensus 148 ~~~~~-~~---~~~~~~~Ca~~~GDSGGPlv~~~~g~~~lvGIvS~G~ 191 (218)
T 3cp7_A 148 ATNDP-MG---SSTQGIPCNMTGGSSGGPWFLGNGTGGAQNSTNSYGY 191 (218)
T ss_dssp CEECT-TS---SSCEEEECCCCTTCTTCEEEESSSSSSCEEEECCEEE
T ss_pred EEcCC-CC---CceEEecCCCCCCCcCCeeEEccCCCeEEEEEEcccc
Confidence 00000 00 1112233445679999999964 378999999875
No 130
>1elv_A Complement C1S component; trypsin-like serin protease, CCP (OR sushi or SCR)module, HY; HET: NAG FUC NES; 1.70A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1
Probab=99.06 E-value=5.6e-09 Score=103.75 Aligned_cols=169 Identities=16% Similarity=0.155 Sum_probs=102.1
Q ss_pred EEEEEEEcCCCeEEecccccCCCCcEEEEeCC-------CcEEEE---EEEEEcC--------------CCCEEEEEEcC
Q 013014 153 SGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD-------QSAYDA---KIVGFDQ--------------DKDVAVLRIDA 208 (451)
Q Consensus 153 ~GSGfiI~~~G~ILT~aHVv~~~~~i~V~~~d-------g~~~~a---~vv~~d~--------------~~DlAlLkv~~ 208 (451)
.|.|.+|+++ +|||+|||+.+.....|.+.. ...+.. +-+..|+ .+||||||++.
T Consensus 104 ~CgGsLIs~~-~VLTAAHC~~~~~~~~v~~G~~~~~~~~~~~~~v~~v~~i~~Hp~y~~~~~~~~~~~~~nDIALl~L~~ 182 (333)
T 1elv_A 104 WAGGALINEY-WVLTAAHVVEGNREPTMYVGSTSVQTSRLAKSKMLTPEHVFIHPGWKLLAVPEGRTNFDNDIALVRLKD 182 (333)
T ss_dssp EEEEEEEETT-EEEECHHHHTTCSSCCEECSCSBCC-------CEECEEEEEECTTSCCCSSCTTCCCCTTCCEEEEESS
T ss_pred ceeEEEecCC-EEEehhheeCCCCCCeEEEeeeecccCccceeeeeccceEEECCCCcccccccccCCCcceEEEEEeCC
Confidence 6999999987 999999999876544555432 122222 4444443 35999999987
Q ss_pred CC---CCCcceecCCCC---CCCCCcEEEEeeCCCCCC----CceEEeEEeeeeeeeccCCCC----------CCcccEE
Q 013014 209 PK---DKLRPIPIGVSA---DLLVGQKVYAIGNPFGLD----HTLTTGVISGLRREISSAATG----------RPIQDVI 268 (451)
Q Consensus 209 ~~---~~~~~l~l~~s~---~~~~G~~V~~iG~p~g~~----~~~~~G~Vs~~~~~~~~~~~~----------~~~~~~i 268 (451)
+. ..+.|+.|.... .+..|+.+++.||..... .......+.-+.......... .....++
T Consensus 183 ~v~~~~~v~PicLp~~~~~~~~~~g~~~~v~GWG~t~~~~~~~~L~~~~v~v~~~~~C~~~~~~~~~~~~~~~~~~~~~~ 262 (333)
T 1elv_A 183 PVKMGPTVSPICLPGTSSDYNLMDGDLGLISGWGRTEKRDRAVRLKAARLPVAPLRKCKEVKVEKPTADAEAYVFTPNMI 262 (333)
T ss_dssp CCCCBTTBCCCBCCCSSGGGCCCTTCEEEEEESCCCSSCSSCSBCEEEEEEEECHHHHHTC----------CCCCCTTEE
T ss_pred CCcCCCcccceecCCCcccccccCCcEEEEEECcCcCCCCcCceeEEEEEEEEcHHHhhhhhhcccccccccccCCCCeE
Confidence 64 245677775332 245799999999864322 123333333222211110000 0112334
Q ss_pred EE----cccCCCCCCCCceeCC---Cc---eEEEEEeeeeCCCCCccceeEEEeccCchhhHHHhhhc
Q 013014 269 QT----DAAINPGNSGGPLLDS---SG---SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKF 326 (451)
Q Consensus 269 ~~----d~~i~~G~SGGPlvd~---~G---~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~~ 326 (451)
-. ....+.|+|||||+-. ++ .++||++++.. ++. .+....+.....||++.++.
T Consensus 263 Cag~~~~~~~C~GDSGGPL~~~~~~~~~~~~l~GIvS~g~~-C~~---~~vyt~V~~y~~WI~~~~~~ 326 (333)
T 1elv_A 263 CAGGEKGMDSCKGDSGGAFAVQDPNDKTKFYAAGLVSWGPQ-CGT---YGLYTRVKNYVDWIMKTMQE 326 (333)
T ss_dssp EEECSTTCBCCTTCTTCEEEEECSSCTTCEEEEEEEEECSS-TTS---EEEEEEGGGGHHHHHHHHHH
T ss_pred CccCCCCCCcCcCcCCCceEEEECCCCcEEEEEEEEeeCCC-CCC---CcEEeEHHHHHHHHHHHHhc
Confidence 33 2357899999999853 23 49999998643 332 47778888888888886653
No 131
>1arb_A Achromobacter protease I; hydrolase(serine protease); 1.20A {Achromobacter lyticus} SCOP: b.47.1.1 PDB: 1arc_A*
Probab=99.06 E-value=1.1e-09 Score=105.64 Aligned_cols=150 Identities=13% Similarity=0.116 Sum_probs=83.6
Q ss_pred HhCCceEEEEeeeeccCccccccccccCeEEEEEEEcCC-----CeEEecccccCCC----CcEEEEeCCC---------
Q 013014 124 ENTPSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSK-----GHVVTNYHVIRGA----SDIRVTFADQ--------- 185 (451)
Q Consensus 124 ~~~~SVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~-----G~ILT~aHVv~~~----~~i~V~~~dg--------- 185 (451)
..+.||++|.. .+...|+|++|+++ .||||||||+.+. ..+.|.+..+
T Consensus 20 ~~~~aV~rl~~--------------~g~~~CGGSLI~~~~~~~~~~VLTAAHCv~~~~~~~~~~~v~~~~~~~~c~~~~~ 85 (268)
T 1arb_A 20 DIIRAVGAYSK--------------SGTLACTGSLVNNTANDRKMYFLTAHHCGMGTASTAASIVVYWNYQNSTCRAPNT 85 (268)
T ss_dssp TGGGGEEEEEE--------------TTEEEEEEEEBCCTTCCCCCEEEEEGGGSCCSHHHHHTCEEEESCCCSSCCCTTS
T ss_pred HhhceEEEEEe--------------CCccEEeEEEEcCCCCCCCCEEEEcHHhCCCccCcceEEEEEeCCCCCccccccc
Confidence 56778999864 12457999999862 5999999999752 3455554210
Q ss_pred ------------cE-EEEEEEEEcCCCCEEEEEEcCCCCCCcceecCCCCCCCCCcEEEEeeCCCCCCCce-EE------
Q 013014 186 ------------SA-YDAKIVGFDQDKDVAVLRIDAPKDKLRPIPIGVSADLLVGQKVYAIGNPFGLDHTL-TT------ 245 (451)
Q Consensus 186 ------------~~-~~a~vv~~d~~~DlAlLkv~~~~~~~~~l~l~~s~~~~~G~~V~~iG~p~g~~~~~-~~------ 245 (451)
+. ....+......+||||||++.+. + .+..+++.||........ ..
T Consensus 86 ~~~~~~~~~~~~~~~v~~~i~h~~~~nDIALLrL~~~v---~-----------~~~~~~vsGWG~t~~~~~~~~~~~~~~ 151 (268)
T 1arb_A 86 PASGANGDGSMSQTQSGSTVKATYATSDFTLLELNNAA---N-----------PAFNLFWAGWDRRDQNYPGAIAIHHPN 151 (268)
T ss_dssp GGGGSCCCCCCCCEEECEEEEEEETTTTEEEEEESSCC---C-----------GGGCCEEBCEECCSCCCSCEEEEECGG
T ss_pred cccccccCCcceEEeccceEecCCCCCceEEEEecCCC---C-----------CCCceEEeCcCccCCCCCcceeeccCC
Confidence 11 22233334567899999998642 1 133455555532211100 00
Q ss_pred eEEeeeeeee-----ccCCCCCCcccEEEEc-----ccCCCCCCCCceeCCCceEEEEEeeeeCCCC
Q 013014 246 GVISGLRREI-----SSAATGRPIQDVIQTD-----AAINPGNSGGPLLDSSGSLIGINTAIYSPSG 302 (451)
Q Consensus 246 G~Vs~~~~~~-----~~~~~~~~~~~~i~~d-----~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~~ 302 (451)
+.+..+.... ..+. ......++... ...+.|+|||||+..+++++||+++....++
T Consensus 152 ~~l~~i~~~~~~~~~~~~~-~~~~~~~iCag~~~~~gdtC~gdsGgPl~~~~~~~~Gi~s~g~~~C~ 217 (268)
T 1arb_A 152 VAEKRISNSTSPTSFVAWG-GGAGTTHLNVQWQPSGGVTEPGSSGSPIYSPEKRVLGQLHGGPSSCS 217 (268)
T ss_dssp GCSCEEEEECSCCEEECTT-SSSCSSEEEEECCTTSCCCCTTCTTCEEECTTSCEEEEEEECSCCTT
T ss_pred cccEEEEeecccccccccc-ccccCCeEEEeeecCCCCCccCcccCCcEeeCCEEEEEEeecCcccC
Confidence 0000010000 0011 00112344432 2478999999999878899999998754444
No 132
>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens}
Probab=99.05 E-value=2.3e-10 Score=91.89 Aligned_cols=72 Identities=18% Similarity=0.324 Sum_probs=54.7
Q ss_pred hhhhCc---cceEEEecCCCCcccccC-ceeeecccCCCCCCCcEEEEECCEEcC--CHHHHHHHHhcCCCCCEEEEEEE
Q 013014 344 VEQLGV---SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCKVGDELLLQGI 417 (451)
Q Consensus 344 ~~~~~~---~Gv~V~~v~~~s~a~~aG-l~~~~~~~~~~L~~GDiIl~vnG~~i~--~~~dl~~~l~~~~~g~~v~l~v~ 417 (451)
++.+|+ .|++|.++.++|||+++| |++ ||+|++|||+++. ++.++.+++... ++.+.++|.
T Consensus 14 ~~~~g~~~~~gv~V~~v~~~s~A~~aG~l~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~~--~~~v~l~v~ 80 (92)
T 3cyy_A 14 NEEYGLRLASHIFVKEISQDSLAARDGNIQE-----------GDVVLKINGTVTENMSLTDAKTLIERS--KGKLKMVVQ 80 (92)
T ss_dssp TSCCCEEEEEEEEEEEECTTCHHHHSCCCCT-----------TCEEEEETTEECTTCCHHHHHHHHHTT--TTEEEEEEE
T ss_pred CCCCCEEEeCCEEEEEECCCChHHhcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHcC--CCcEEEEEE
Confidence 344554 689999999999999999 999 9999999999999 999999988763 469999999
Q ss_pred ECCeEEEEEEE
Q 013014 418 KQPPVLSDNLR 428 (451)
Q Consensus 418 R~g~~~~~~v~ 428 (451)
|+|+..++++.
T Consensus 81 r~g~~~~~~v~ 91 (92)
T 3cyy_A 81 RDERATLLNVP 91 (92)
T ss_dssp C----------
T ss_pred eCCceeeeeCC
Confidence 99988776654
No 133
>1md8_A C1R complement serine protease; innate immunity, activation, substrate specificity, hydrolase; 2.80A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 PDB: 1md7_A*
Probab=99.05 E-value=3.9e-09 Score=104.87 Aligned_cols=170 Identities=17% Similarity=0.210 Sum_probs=102.2
Q ss_pred eEEEEEEEcCCCeEEecccccCC-------CCcEEEEeCCC--------cEEEEEEEEEcC----------CCCEEEEEE
Q 013014 152 GSGSGFVWDSKGHVVTNYHVIRG-------ASDIRVTFADQ--------SAYDAKIVGFDQ----------DKDVAVLRI 206 (451)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHVv~~-------~~~i~V~~~dg--------~~~~a~vv~~d~----------~~DlAlLkv 206 (451)
..|.|.+|+++ +|||+|||+.. ...+.|.+..- ..+..+-+..|+ .+||||||+
T Consensus 111 ~~CgGsLIs~~-~VLTAAHCv~~~~~~~~~~~~~~V~~G~~~~~~~~~~~~~~V~~i~~Hp~y~~~~~~~~~nDIALl~L 189 (329)
T 1md8_A 111 GRGGGALLGDR-WILTAAHTLYPKEHEAQSNASLDVFLGHTNVEELMKLGNHPIRRVSVHPDYRQDESYNFEGDIALLEL 189 (329)
T ss_dssp SEEEEEEETTT-EEEECGGGTSCTTC-----CCCCEEESCSBHHHHHHHCCCCEEEEEECSSCCSSCTTCCTTCCEEEEE
T ss_pred CCcceEEecCC-EEEecCCEEEeCCcccCCCceEEEEeccccccccccccceeeEEEEECCCcccccCCCCCccEEEEEE
Confidence 36999999976 99999999973 23455665432 123444444553 249999999
Q ss_pred cCCC---CCCcceecCCCCC-CCCCcEEEEeeCCCCCC---CceEEeEEeeeeeeeccC-----C-CCCCcccEEEE---
Q 013014 207 DAPK---DKLRPIPIGVSAD-LLVGQKVYAIGNPFGLD---HTLTTGVISGLRREISSA-----A-TGRPIQDVIQT--- 270 (451)
Q Consensus 207 ~~~~---~~~~~l~l~~s~~-~~~G~~V~~iG~p~g~~---~~~~~G~Vs~~~~~~~~~-----~-~~~~~~~~i~~--- 270 (451)
+.+. ..+.|+.|..... +..|..+++.||..... .......+.-+....... . .......++-.
T Consensus 190 ~~~v~~~~~v~PicLp~~~~~~~~g~~~~v~GWG~t~~~~~~~L~~~~v~i~~~~~C~~~~~~~~~~~~~~~~~iCAg~~ 269 (329)
T 1md8_A 190 ENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFGVMEEKIAHDLRFVRLPVANPQACENWLRGKNRMDVFSQNMFCAGHP 269 (329)
T ss_dssp SSCCCCBTTBCCCBCCCSGGGGCTTCEEEEEECCBCSSSBCSBCEEEEEEBCCHHHHHHHHHHTTCCCCCCTTEEEESCT
T ss_pred CCcccCCCceEccccCCCccccCCCCEEEEEeCCCCCCCCCccceEEEEEEcCHHHHHHHhhcccccccCCCCeEeeecC
Confidence 8764 2456777754332 35789999999864332 122333332222211110 0 00011234443
Q ss_pred --cccCCCCCCCCceeCC---Cc--eEEEEEeeeeCCCCCccceeEEEeccCchhhHHHhhh
Q 013014 271 --DAAINPGNSGGPLLDS---SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (451)
Q Consensus 271 --d~~i~~G~SGGPlvd~---~G--~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (451)
....+.|+|||||+-. ++ .++||++++.. ++. ..+...-+....+||++.++
T Consensus 270 ~~~~d~C~GDSGGPL~~~~~~~~~~~l~GIvS~G~~-C~~--~~gvyT~V~~y~~WI~~~i~ 328 (329)
T 1md8_A 270 SLKQDACQGDSGGVFAVRDPNTDRWVATGIVSWGIG-CSR--GYGFYTKVLNYVDWIKKEME 328 (329)
T ss_dssp TCSCBCCTTTTTCEEEEEETTTTEEEEEEEEEECSS-SSS--SCEEEEEGGGTHHHHHHHHH
T ss_pred CCCCcCCCCccccceEEEECCCCcEEEEEEEEECCC-cCC--CCcEEEEHHHHHHHHHHHHh
Confidence 2357899999999852 23 49999998643 332 34677888888888877553
No 134
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=99.04 E-value=1.6e-10 Score=92.81 Aligned_cols=76 Identities=20% Similarity=0.279 Sum_probs=62.5
Q ss_pred ccccceeccchhhhhhCccceEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEcCCHH--HHHHHHhcCCCC
Q 013014 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGS--DLYRILDQCKVG 409 (451)
Q Consensus 332 ~~lGi~~~~~~~~~~~~~~Gv~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i~~~~--dl~~~l~~~~~g 409 (451)
..+|+.+...... ..|++|.+|.++|||+++||++ ||+|++|||++|.++. ++..++.. +|
T Consensus 13 ~~~G~~l~~~~~~----~~g~~V~~V~~~spA~~aGl~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~--~g 75 (91)
T 2pkt_A 13 GPWGFRLVGGKDF----EQPLAISRVTPGSKAALANLCI-----------GDVITAIDGENTSNMTHLEAQNRIKG--CT 75 (91)
T ss_dssp SCCSEEEEEEGGG----TEEEEEEEECTTSHHHHTTCCT-----------TCEEEEETTEECTTCCHHHHHHHHHT--CS
T ss_pred CCCCEEEEccCCC----CCCeEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CC
Confidence 3466666532111 1589999999999999999999 9999999999999998 88888876 79
Q ss_pred CEEEEEEEECCeEEE
Q 013014 410 DELLLQGIKQPPVLS 424 (451)
Q Consensus 410 ~~v~l~v~R~g~~~~ 424 (451)
+++.++|.|+|+..+
T Consensus 76 ~~v~l~v~R~g~~~~ 90 (91)
T 2pkt_A 76 DNLTLTVARSEHESD 90 (91)
T ss_dssp SEEEEEEEEECCCCC
T ss_pred CeEEEEEEECCcccc
Confidence 999999999987643
No 135
>2xxl_A GRAM-positive specific serine protease, isoform B; hydrolase, innate immunity; HET: NAG FUC BMA; 1.80A {Drosophila melanogaster}
Probab=99.04 E-value=4.9e-09 Score=107.25 Aligned_cols=173 Identities=15% Similarity=0.157 Sum_probs=106.6
Q ss_pred eEEEEEEEcCCCeEEecccccCCC--CcEEEEeCC---------------------CcEEEEEEEEEcCC-------CCE
Q 013014 152 GSGSGFVWDSKGHVVTNYHVIRGA--SDIRVTFAD---------------------QSAYDAKIVGFDQD-------KDV 201 (451)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHVv~~~--~~i~V~~~d---------------------g~~~~a~vv~~d~~-------~Dl 201 (451)
..+.|.+|+++ ||||+|||+.+. ..+.|++.+ .+.+..+-+..|+. +||
T Consensus 146 ~~CGGsLIs~~-~VLTAAHCv~~~~~~~~~V~lG~~~~~~~~~~~~~~~~~~c~~~~~~~~V~~ii~Hp~y~~~~~~nDI 224 (408)
T 2xxl_A 146 FLCGGAMISER-YILTAAHCVHGLQNDLYEIRLGEHRISTEEDCRQQGRKKKCAPPVVNVGIEKHLIHEKYDARHIMHDI 224 (408)
T ss_dssp EEEEEEEEETT-EEEECGGGTTTCTTTEEEEEESCSBTTCSCCEEEETTEEEECCCCEEEEEEEEEECTTCBTTTTBSCC
T ss_pred EEEEEEEEECC-EEEEcHHhcCCCCCceEEEEeeeeECCCccchhhcccccccCCceEEEeEEEEEeCCCCCccccccce
Confidence 47999999987 999999999764 456776642 12344444555553 599
Q ss_pred EEEEEcCCC---CCCcceecCCCCC----CCCCcEEEEeeCCCCCC----CceEEeEEeeeeeeecc--CCCCCCcccEE
Q 013014 202 AVLRIDAPK---DKLRPIPIGVSAD----LLVGQKVYAIGNPFGLD----HTLTTGVISGLRREISS--AATGRPIQDVI 268 (451)
Q Consensus 202 AlLkv~~~~---~~~~~l~l~~s~~----~~~G~~V~~iG~p~g~~----~~~~~G~Vs~~~~~~~~--~~~~~~~~~~i 268 (451)
|||+++.+. ..+.|+.|..... ...|+.+++.||..... .......+.-+...... +... ....++
T Consensus 225 ALL~L~~~v~~~~~V~PICLp~~~~~~~~~~~~~~~~v~GWG~t~~~~~s~~L~~~~v~iv~~~~C~~~~~~~-~~~~~i 303 (408)
T 2xxl_A 225 ALLKLNRSVPFQKHIKPICLPITDELKEKAEQISTYFVTGWGTTENGSSSDVLLQANVPLQPRSACSQAYRRA-VPLSQL 303 (408)
T ss_dssp EEEEESSCCCCBTTBCCCBCCCSHHHHHHTTTCSEEEEEECCCBTTBCSCSBCEEEEEEEECHHHHHHHHTSC-CCTTEE
T ss_pred EEEEECCccccccCccccCCCCcccccccccCCCEEEEEEeCcCCCCCCCchheEeeeeecCHHHHHHHhccc-CCCceE
Confidence 999998764 2456777754322 46789999999864322 12223333222221111 1100 011333
Q ss_pred EE----cccCCCCCCCCce------eCC-Cc--eEEEEEeeeeCCCCCccceeEEEeccCchhhHHHhhhc
Q 013014 269 QT----DAAINPGNSGGPL------LDS-SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKF 326 (451)
Q Consensus 269 ~~----d~~i~~G~SGGPl------vd~-~G--~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~~ 326 (451)
-. ....+.|+||||| +.. +| .++||++++...++....-+...-+....+||++.++.
T Consensus 304 CAg~~~g~d~C~GDSGGPL~~~~~~~~~~~~~~~l~GIvS~G~~~Cg~~~~PgVYTrVs~y~~WI~~~i~~ 374 (408)
T 2xxl_A 304 CVGGGDLQDSCKGDSGGPLQAPAQYLGEYAPKMVEFGIVSQGVVTCGQISLPGLYTNVGEYVQWITDTMAS 374 (408)
T ss_dssp EECCSCSSSGGGSCTTCEEEEEECCTTCSSCEEEEEEEEEECCCCTTSCCCCEEEEEGGGGHHHHHHHHHH
T ss_pred eecCCCCCccCCCcccChhhcCccceEEECCEEEEEEEEEECCCCCCCCCCCeEEEEHHHHHHHHHHHHhh
Confidence 33 2356789999999 532 33 68999998744455433456777888888888886653
No 136
>2w4f_A Protein LAP4; structural protein, phosphoprotein, UBL conjugation, leucine-rich repeat, alternative splicing, cytoplasm, circletail, coiled coil; 1.30A {Homo sapiens}
Probab=99.03 E-value=2.1e-10 Score=93.10 Aligned_cols=81 Identities=20% Similarity=0.307 Sum_probs=63.1
Q ss_pred cccccceeccchhhhhh--CccceEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEcCCHHHHHHHHhcCCC
Q 013014 331 RPILGIKFAPDQSVEQL--GVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKV 408 (451)
Q Consensus 331 ~~~lGi~~~~~~~~~~~--~~~Gv~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i~~~~dl~~~l~~~~~ 408 (451)
.++||+.+........+ ...|++|.+|.+++||+++||++ ||+|++|||++|.++.++........+
T Consensus 13 ~~glG~~i~~g~~~~~~~~~~~g~~V~~V~~~spA~~aGl~~-----------GD~I~~ing~~v~~~~~~~~~~~~~~~ 81 (97)
T 2w4f_A 13 TGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAGVRV-----------GDKLLEVNGVALQGAEHHEAVEALRGA 81 (97)
T ss_dssp TTBSSEEEEECTTSCCSBTTBCSEEEEEECTTSHHHHHTCCT-----------TCEEEEETTEECTTCCHHHHHHHHHTS
T ss_pred CCceeEEEECCccCCcccCCCCCEEEEEECCCChHHHcCCCC-----------CCEEEEECCEECCCcCHHHHHHHHhCC
Confidence 46778777632110001 23799999999999999999999 999999999999998876655443347
Q ss_pred CCEEEEEEEECCeE
Q 013014 409 GDELLLQGIKQPPV 422 (451)
Q Consensus 409 g~~v~l~v~R~g~~ 422 (451)
|++++++|.|+|+.
T Consensus 82 g~~v~l~v~R~g~~ 95 (97)
T 2w4f_A 82 GTAVQMRVWRERET 95 (97)
T ss_dssp CSEEEEEEECCSSC
T ss_pred CCeEEEEEEeCCcc
Confidence 99999999999875
No 137
>3nxp_A Prethrombin-1; allostery, blood coagulation, hydro kringle, serine protease, zymogen; HET: NAG; 2.20A {Homo sapiens}
Probab=99.02 E-value=1.6e-09 Score=111.36 Aligned_cols=173 Identities=16% Similarity=0.208 Sum_probs=105.7
Q ss_pred CeEEEEEEEcCCCeEEecccccC--------CCCcEEEEeCC----------CcEEEEEEEEEcCC--------CCEEEE
Q 013014 151 QGSGSGFVWDSKGHVVTNYHVIR--------GASDIRVTFAD----------QSAYDAKIVGFDQD--------KDVAVL 204 (451)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHVv~--------~~~~i~V~~~d----------g~~~~a~vv~~d~~--------~DlAlL 204 (451)
...|.|.||+++ +|||+|||+. ....+.|++.. .+.+..+-+..|+. +|||||
T Consensus 190 ~~~CGGsLIs~~-~VLTAAHCv~~~~~~~~~~~~~~~V~lG~~~~~~~~~~~~~~~~V~~ii~Hp~y~~~~~~~nDIALL 268 (424)
T 3nxp_A 190 ELLCGASLISDR-WVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALM 268 (424)
T ss_dssp EEEEEEEESSSS-EEEECHHHHEEGGGTEECCGGGEEEEESCCBSSSCCTTTCEEECEEEEEECTTCBTTTTSBTCCEEE
T ss_pred CccceeEEEcCC-EEEEhHHhcCccccccccCcccEEEEeCcccccccCCCceeEEEEEEEEeCCCCCCCCCCcCCeEEE
Confidence 357999999976 9999999984 33467777642 12334454555543 499999
Q ss_pred EEcCCC---CCCcceecCCCCC----CCCCcEEEEeeCCCC---------C--CCceEEeEEeeeeeeeccCCCC-CCcc
Q 013014 205 RIDAPK---DKLRPIPIGVSAD----LLVGQKVYAIGNPFG---------L--DHTLTTGVISGLRREISSAATG-RPIQ 265 (451)
Q Consensus 205 kv~~~~---~~~~~l~l~~s~~----~~~G~~V~~iG~p~g---------~--~~~~~~G~Vs~~~~~~~~~~~~-~~~~ 265 (451)
+++.+. ..+.|+.|..... +..|..+.+.||... . ........+.-+.......... ....
T Consensus 269 kL~~pv~~s~~v~PicLp~~~~~~~~~~~g~~~~v~GWG~t~~~~~~~~~~~~~~~L~~~~v~ii~~~~C~~~~~~~i~~ 348 (424)
T 3nxp_A 269 KLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVERPVCKDSTRIRITD 348 (424)
T ss_dssp EESSCCCCCSSCCCCBCCCHHHHHHHHHHCSEEEEEESSHHHHHHHHC----CCSBCEEEEEEBCCHHHHHHTCSSCCCT
T ss_pred EecCccccCCcccccCCCCcccccccccCCCeEEEEecCCCCccCccccCCCCCccceEEEeeEEcHHHhhhhccCcCCC
Confidence 998754 2356666643221 346899999998631 1 1223333333222221111111 1123
Q ss_pred cEEEEc--------ccCCCCCCCCceeCC---Cc--eEEEEEeeeeCCCCCccceeEEEeccCchhhHHHhhh
Q 013014 266 DVIQTD--------AAINPGNSGGPLLDS---SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (451)
Q Consensus 266 ~~i~~d--------~~i~~G~SGGPlvd~---~G--~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (451)
.++-.. ...+.|+|||||+-. +| .++||++++. .++.....+....+....+||++.++
T Consensus 349 ~~iCAg~~~~~~~~~d~C~GDSGGPLv~~~~~~~~~~l~GIvS~G~-~C~~~~~pgVyT~Vs~y~~WI~~~i~ 420 (424)
T 3nxp_A 349 NMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGE-GCDRDGKYGFYTHVFRLKKWIQKVID 420 (424)
T ss_dssp TEEEESCCCBTTBCCCTTCSCTTCEEEEECTTTCCEEEEEEECCSS-CTTTCCSCEEEEECTTCHHHHHHHHH
T ss_pred CeEecccCCCCCCCCccCCCcCCCceEEEECCCCcEEEEEEEEeCC-CCCCCCCCEEEEEHHHHHHHHHHHHH
Confidence 444432 257899999999853 34 5999999864 34433445777888888888887654
No 138
>1qau_A Neuronal nitric oxide synthase (residues 1-130); beta-finger, oxidoreductase; 1.25A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1qav_B
Probab=99.01 E-value=7.3e-10 Score=92.42 Aligned_cols=85 Identities=20% Similarity=0.301 Sum_probs=71.4
Q ss_pred ccccceeccchhhhhhCccceEEEecCCCCcccccCc-eeeecccCCCCCCCcEEEEECCEEcCC--HHHHHHHHhcCCC
Q 013014 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGL-LSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKV 408 (451)
Q Consensus 332 ~~lGi~~~~~~~~~~~~~~Gv~V~~v~~~s~a~~aGl-~~~~~~~~~~L~~GDiIl~vnG~~i~~--~~dl~~~l~~~~~ 408 (451)
..+|+.+.... +..|++|.++.++|||+++|| ++ ||+|++|||+++.+ +.++.+++.. .+
T Consensus 13 ~glG~~~~~~~-----~~~~~~V~~v~~~spA~~aGll~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~-~~ 75 (112)
T 1qau_A 13 GGLGFLVKERV-----SKPPVIISDLIRGGAAEQSGLIQA-----------GDIILAVNDRPLVDLSYDSALEVLRG-IA 75 (112)
T ss_dssp TBTSEEEEECS-----SSSCEEEEEECTTSHHHHHTCCCT-----------TCEEEEETTEECTTSCHHHHHHHHHH-SC
T ss_pred CceeEEEEecC-----CCCCEEEEEeCCCChHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHh-CC
Confidence 45677765432 125899999999999999998 99 99999999999999 9999999987 47
Q ss_pred CCEEEEEEEECCeEEEEEEEeeecC
Q 013014 409 GDELLLQGIKQPPVLSDNLRLLWSE 433 (451)
Q Consensus 409 g~~v~l~v~R~g~~~~~~v~l~~~~ 433 (451)
|+.+.+++.|+|+..+++++.....
T Consensus 76 g~~v~l~v~R~g~~~~~~~~~~~~~ 100 (112)
T 1qau_A 76 SETHVVLILRGPEGFTTHLETTFTG 100 (112)
T ss_dssp SSSEEEEEEECCTTSEEEEEEEECT
T ss_pred CCcEEEEEEeCCcccceEeeeeccC
Confidence 8999999999999888888865443
No 139
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=99.01 E-value=4.7e-10 Score=100.36 Aligned_cols=81 Identities=19% Similarity=0.281 Sum_probs=68.1
Q ss_pred ccccccceeccchhhhhhCccceEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEcCCHHH-HHHHHhcCCC
Q 013014 330 TRPILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSD-LYRILDQCKV 408 (451)
Q Consensus 330 ~~~~lGi~~~~~~~~~~~~~~Gv~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i~~~~d-l~~~l~~~~~ 408 (451)
.++|||+.+.... .|++|.++.++|||+++||++ ||+|++|||+++.++.+ +...+....+
T Consensus 14 ~~~~lG~~~~~~~-------~g~~V~~v~~~spA~~aGl~~-----------GD~I~~ing~~v~~~~~~~~~~~~~~~~ 75 (166)
T 1w9e_A 14 QDGKIGLRLKSID-------NGIFVQLVQANSPASLVGLRF-----------GDQVLQINGENCAGWSSDKAHKVLKQAF 75 (166)
T ss_dssp TTSCCSEEEEEET-------TEEEEEEECTTSHHHHTTCCT-----------TCEEEEETTEECTTCCHHHHHHHHHHCC
T ss_pred CCCcEeEEEEeCC-------CCEEEEEECCCChHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHhcCC
Confidence 4689999987643 689999999999999999999 99999999999999987 6655555567
Q ss_pred CCEEEEEEEECCeEEEEEEE
Q 013014 409 GDELLLQGIKQPPVLSDNLR 428 (451)
Q Consensus 409 g~~v~l~v~R~g~~~~~~v~ 428 (451)
|++++++|.|+++.++++++
T Consensus 76 ~~~v~l~vr~~~~~~~v~l~ 95 (166)
T 1w9e_A 76 GEKITMTIRDRPFERTITMH 95 (166)
T ss_dssp SSEEEEEEECCTTCEEEEEE
T ss_pred CCEEEEEEEcCCCcEEEEEe
Confidence 88999999444488777776
No 140
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=99.00 E-value=4.7e-10 Score=90.03 Aligned_cols=73 Identities=23% Similarity=0.331 Sum_probs=57.9
Q ss_pred cccceeccchhhhhhCccceEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEcC--CHHHHHHHHhcCCCCC
Q 013014 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCKVGD 410 (451)
Q Consensus 333 ~lGi~~~~~~~~~~~~~~Gv~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i~--~~~dl~~~l~~~~~g~ 410 (451)
.+|+.+.... +..|++|.+|.++|||+++||++ ||+|++|||++|. ++.++.+++... |+
T Consensus 15 ~~G~~l~~~~-----~~~g~~V~~V~~~spA~~aGl~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~~--g~ 76 (91)
T 2vsp_A 15 GYGFHLNAIR-----GLPGSFIKEVQKGGPADLAGLED-----------EDVIIEVNGVNVLDEPYEKVVDRIQSS--GK 76 (91)
T ss_dssp BTSCCCBCCT-----TCSCCBC-CCCTTSHHHHTTCCT-----------TCEEEEETTEECTTSCHHHHHHHHTTS--CS
T ss_pred cccEEEEecc-----CCCCeEEEEECCCChHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHcC--CC
Confidence 4677765422 23689999999999999999999 9999999999999 999999999864 89
Q ss_pred EEEEEEEECCeEE
Q 013014 411 ELLLQGIKQPPVL 423 (451)
Q Consensus 411 ~v~l~v~R~g~~~ 423 (451)
+++++|.|+++..
T Consensus 77 ~v~l~v~r~~~~~ 89 (91)
T 2vsp_A 77 NVTLLVCGKKAQD 89 (91)
T ss_dssp EEEEEEEC-----
T ss_pred EEEEEEEeCCccc
Confidence 9999999988654
No 141
>2eeh_A PDZ domain-containing protein 7; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.00 E-value=2.5e-10 Score=93.43 Aligned_cols=74 Identities=23% Similarity=0.274 Sum_probs=60.9
Q ss_pred cccccceeccchhhhhhCccceEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEcCCH--HHHHHHHhcCCC
Q 013014 331 RPILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKV 408 (451)
Q Consensus 331 ~~~lGi~~~~~~~~~~~~~~Gv~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i~~~--~dl~~~l~~~~~ 408 (451)
.++||+.+..... + -.|++|.+|.+++||+++||++ ||+|++|||++|.++ .++...+. .
T Consensus 21 ~~~lG~~~~~~~~---~-~~gv~V~~V~~~spA~~aGL~~-----------GD~I~~ing~~v~~~~~~~~~~~~~---~ 82 (100)
T 2eeh_A 21 AGRLGFSVRGGSE---H-GLGIFVSKVEEGSSAERAGLCV-----------GDKITEVNGLSLESTTMGSAVKVLT---S 82 (100)
T ss_dssp SSSCSEEEECCTT---T-TCCEEEEEECTTSHHHHHTCCS-----------SCEEEEETTEECSSCCHHHHHHHHH---S
T ss_pred CCCccEEEEcccc---C-CCCEEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHhhc---C
Confidence 4689998876321 1 1689999999999999999999 999999999999996 55555554 3
Q ss_pred CCEEEEEEEECCeE
Q 013014 409 GDELLLQGIKQPPV 422 (451)
Q Consensus 409 g~~v~l~v~R~g~~ 422 (451)
|+++.++|.|+|+.
T Consensus 83 ~~~v~l~v~R~g~~ 96 (100)
T 2eeh_A 83 SSRLHMMVRRMGSG 96 (100)
T ss_dssp CSSEEEEEEECSCC
T ss_pred CCEEEEEEEECCcC
Confidence 78999999999864
No 142
>1gpz_A Complement C1R component; hydrolase, activation, innate immunity, modular structure, serine protease; HET: NAG FUC MAN; 2.9A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1
Probab=98.99 E-value=8.7e-09 Score=104.80 Aligned_cols=170 Identities=18% Similarity=0.206 Sum_probs=101.2
Q ss_pred eEEEEEEEcCCCeEEecccccCCC-------CcEEEEeCCC--------cEEEEEEEEEcCC----------CCEEEEEE
Q 013014 152 GSGSGFVWDSKGHVVTNYHVIRGA-------SDIRVTFADQ--------SAYDAKIVGFDQD----------KDVAVLRI 206 (451)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHVv~~~-------~~i~V~~~dg--------~~~~a~vv~~d~~----------~DlAlLkv 206 (451)
+.|.|.+|+++ ||||||||+.+. ..+.|.+..- ..+..+-+..|+. +||||||+
T Consensus 179 ~~CgGsLIs~~-~VLTAAHC~~~~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~~DIALl~L 257 (399)
T 1gpz_A 179 GRGGGALLGDR-WILTAAHTLYPKEHEAQSNASLDVFLGHTNVEELMKLGNHPIRRVSVHPDYRQDESYNFEGDIALLEL 257 (399)
T ss_dssp SEEEEEEETTT-EEEECGGGTSCTTC-----CCCEEEESCSBHHHHHHTCCCCEEEEEECSSCCSSSSSCCTTCCEEEEE
T ss_pred CCeEEEEeCCC-EEEeChhcccccccccCCcceEEEEeccccccccccccccceEEEEECCCCCcCCCCCCCCcEEEEEE
Confidence 46999999976 999999999753 2355665431 1234444455543 49999999
Q ss_pred cCCC---CCCcceecCCCCC-CCCCcEEEEeeCCCCCC---CceEEeEEeeeeeeeccCCC------CCCcccEEEE---
Q 013014 207 DAPK---DKLRPIPIGVSAD-LLVGQKVYAIGNPFGLD---HTLTTGVISGLRREISSAAT------GRPIQDVIQT--- 270 (451)
Q Consensus 207 ~~~~---~~~~~l~l~~s~~-~~~G~~V~~iG~p~g~~---~~~~~G~Vs~~~~~~~~~~~------~~~~~~~i~~--- 270 (451)
+.+. ..+.|+.|..... ...|..+++.||..... .......+.-+......... ......++-.
T Consensus 258 ~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~~~~~~~~~~Cag~~ 337 (399)
T 1gpz_A 258 ENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFGVMEEKIAHDLRFVRLPVANPQACENWLRGKNRMDVFSQNMFCAGHP 337 (399)
T ss_dssp SSCCCCBTTBCCCBCCCSGGGGCTTCEEEEEECC-----CCSBCEEEEEEEECHHHHHC-----------CCSEEEEECG
T ss_pred CCcCcCCCceeeeecCCCccccCCCCEEEEEccCCCCCccCccceEEEEEEcCHHHhhhhhhcccccCcCCCCeEecccC
Confidence 8764 2466777754332 35789999999864321 22233333222221111000 0011233333
Q ss_pred --cccCCCCCCCCceeCC---Cc--eEEEEEeeeeCCCCCccceeEEEeccCchhhHHHhhh
Q 013014 271 --DAAINPGNSGGPLLDS---SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (451)
Q Consensus 271 --d~~i~~G~SGGPlvd~---~G--~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (451)
....+.|+|||||+-. ++ .++||++++.. ++. +.+....+....+||++.++
T Consensus 338 ~~~~d~C~GDSGGPl~~~~~~~~~~~l~GivS~g~~-C~~--~~~vyt~V~~y~~WI~~~~~ 396 (399)
T 1gpz_A 338 SLKQDACQGDSGGVFAVRDPNTDRWVATGIVSWGIG-CSR--GYGFYTKVLNYVDWIKKEME 396 (399)
T ss_dssp GGGGGGGCSCSSCEEEEEETTTTEEEEEEEECCCTT-TTT--TEEEEEEGGGGHHHHHHHTC
T ss_pred CCCCccCCCCCchHeEEEECCCCeEEEEEEEEeCCC-cCC--CCeEEEEhHHhHHHHHHHhc
Confidence 2357899999999842 33 59999998643 332 35777888888888877654
No 143
>2hga_A Conserved protein MTH1368; GFT structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: b.36.1.6
Probab=98.99 E-value=1.2e-09 Score=93.26 Aligned_cols=67 Identities=28% Similarity=0.334 Sum_probs=59.8
Q ss_pred ccceEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEcCCHHHHHHHHhcCCCCCEEEEEEEECCeEEEEEEE
Q 013014 349 VSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDELLLQGIKQPPVLSDNLR 428 (451)
Q Consensus 349 ~~Gv~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i~~~~dl~~~l~~~~~g~~v~l~v~R~g~~~~~~v~ 428 (451)
..|++|.+|.+++||+++ |++ ||+|++|||++|.++.++.+++...++|++++++| |+|+ ++++
T Consensus 24 ~~gv~V~~V~~~spA~~a-L~~-----------GD~Il~InG~~v~~~~dl~~~l~~~~~g~~v~l~V-R~g~---~~v~ 87 (125)
T 2hga_A 24 PDGVQIDSVVPGSPASKV-LTP-----------GLVIESINGMPTSNLTTYSAALKTISVGEVINITT-DQGT---FHLK 87 (125)
T ss_dssp CCCEEEEEECSSSGGGGT-SCT-----------TCEEEEETTEECSSHHHHHHHHTTCCTTCEEEEEE-TTEE---EEEE
T ss_pred CCceEEEEECCCChHHHh-cCC-----------CCEEEEECCEEcCCHHHHHHHHHhcCCCCEEEEEE-ECCE---EEEE
Confidence 379999999999999999 999 99999999999999999999998767899999999 9997 5555
Q ss_pred eee
Q 013014 429 LLW 431 (451)
Q Consensus 429 l~~ 431 (451)
+..
T Consensus 88 l~~ 90 (125)
T 2hga_A 88 TGR 90 (125)
T ss_dssp CCB
T ss_pred Eec
Confidence 543
No 144
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=98.97 E-value=3.8e-10 Score=91.61 Aligned_cols=79 Identities=23% Similarity=0.325 Sum_probs=63.2
Q ss_pred ccccceeccchhhhhhCccceEEEecCCCCcccccC-ceeeecccCCCCCCCcEEEEECCEEcCC--HHHHHHHHhcCCC
Q 013014 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKV 408 (451)
Q Consensus 332 ~~lGi~~~~~~~~~~~~~~Gv~V~~v~~~s~a~~aG-l~~~~~~~~~~L~~GDiIl~vnG~~i~~--~~dl~~~l~~~~~ 408 (451)
..+|+.+............|++|.+|.+++||+++| |++ ||+|++|||+++.+ +.++.+++.. .
T Consensus 14 ~~lG~~i~~~~~~~~~~~~~~~V~~V~~~spA~~aG~l~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~--~ 80 (97)
T 2jil_A 14 NTFGFVIRGGAHDDRNKSRPVVITSVRPGGPADREGTIKP-----------GDRLLSVDGIRLLGTTHAEAMSILKQ--C 80 (97)
T ss_dssp TBCSEEEEEECCSCC--CEEEEEEEECTTSHHHHHCCCCT-----------TCEEEEETTEECSSCCHHHHHHHHHH--S
T ss_pred CccCEEEeCcccCCCCCCCCEEEEEECCCCHHHHCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--C
Confidence 356766653211111123689999999999999999 999 99999999999999 8999999886 7
Q ss_pred CCEEEEEEEECCeEE
Q 013014 409 GDELLLQGIKQPPVL 423 (451)
Q Consensus 409 g~~v~l~v~R~g~~~ 423 (451)
|+.+.++|.|+++..
T Consensus 81 g~~v~l~v~R~~~~~ 95 (97)
T 2jil_A 81 GQEAALLIEYDVSET 95 (97)
T ss_dssp CSEEEEEEEEECCCC
T ss_pred CCeEEEEEEeCCCcC
Confidence 899999999988754
No 145
>1wh1_A KIAA1095 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.97 E-value=3e-10 Score=96.80 Aligned_cols=81 Identities=22% Similarity=0.309 Sum_probs=67.9
Q ss_pred ccccceeccchhhhhhCccceEEEecCCCCcccccC-ceeeecccCCCCCCCcEEEEECCEEcCCHHHHHHHHhcCCCCC
Q 013014 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGD 410 (451)
Q Consensus 332 ~~lGi~~~~~~~~~~~~~~Gv~V~~v~~~s~a~~aG-l~~~~~~~~~~L~~GDiIl~vnG~~i~~~~dl~~~l~~~~~g~ 410 (451)
.+||+.+...... ....|++|.+|.+++||+++| |++ ||+|++|||++|.++.++.++|.. .+|+
T Consensus 32 ~~lG~~~~~~~~~--~~~~gv~V~~V~~~spA~~aG~l~~-----------GD~I~~ing~~v~~~~~~~~~l~~-~~g~ 97 (124)
T 1wh1_A 32 DKLGLTVCYRTDD--EDDIGIYISEIDPNSIAAKDGRIRE-----------GDRIIQINGIEVQNREEAVALLTS-EENK 97 (124)
T ss_dssp CCCCEEEECCCCC--SSCCCEEEEEECSSSHHHHTCCCCT-----------TCEEEEESSCBCCSHHHHHHHHTC-SSCC
T ss_pred CcccEEEEecCCC--CCCCCEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEECCCHHHHHHHHHh-CCCC
Confidence 4688888753211 113799999999999999999 999 999999999999999999999987 5689
Q ss_pred EEEEEEEECCeEEEEE
Q 013014 411 ELLLQGIKQPPVLSDN 426 (451)
Q Consensus 411 ~v~l~v~R~g~~~~~~ 426 (451)
++.|+|.|+|+.++..
T Consensus 98 ~v~l~v~R~g~~~~~~ 113 (124)
T 1wh1_A 98 NFSLLIARPELQLDEG 113 (124)
T ss_dssp SCCEEEEECSSCCCCC
T ss_pred EEEEEEEECCEEeecc
Confidence 9999999999765544
No 146
>4dur_A Plasminogen, serine protease; fibrinolysis, hydrolase; HET: NAG GAL SIA; 2.45A {Homo sapiens} PDB: 4a5t_S* 4duu_A 2feb_A
Probab=98.97 E-value=2.4e-08 Score=109.90 Aligned_cols=173 Identities=16% Similarity=0.235 Sum_probs=107.2
Q ss_pred CeEEEEEEEcCCCeEEecccccCCC---CcEEEEeCC---------CcEEEEEEEEEcC-CCCEEEEEEcCCC---CCCc
Q 013014 151 QGSGSGFVWDSKGHVVTNYHVIRGA---SDIRVTFAD---------QSAYDAKIVGFDQ-DKDVAVLRIDAPK---DKLR 214 (451)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHVv~~~---~~i~V~~~d---------g~~~~a~vv~~d~-~~DlAlLkv~~~~---~~~~ 214 (451)
...+.|.||+++ +|||||||+.+. ..+.|.+.. .+.+...-+..++ ..|||||+++.+. ..+.
T Consensus 585 ~~~CGGSLIs~~-wVLTAAHCv~~~~~~~~~~V~lG~~~~~~~~~~~q~~~V~~i~~hp~~nDIALLkL~~pv~~s~~V~ 663 (791)
T 4dur_A 585 MHFCGGTLISPE-WVLTAAHCLEKSPRPSSYKVILGAHQEVNLEPHVQEIEVSRLFLEPTRKDIALLKLSSPAVITDKVI 663 (791)
T ss_dssp CEEEEEEEEETT-EEEECGGGGSSCCCGGGCEEEESCCBSSSCCTTCEEEEEEEEEECTTCCSCEEEEESSCCCCCSSCC
T ss_pred CeEEEEEEEeCC-EEEECHHHcCCcCCCceEEEEeccccccCCCCccEEEEEEEEECCCCCCceEEEEecCccccCCcee
Confidence 457999999987 999999999753 456666632 2345555555555 4799999998753 2456
Q ss_pred ceecCCC-CCCCCCcEEEEeeCCCCCC----CceEEeEEeeeeeeeccC---CCCCCcccEEEE-----cccCCCCCCCC
Q 013014 215 PIPIGVS-ADLLVGQKVYAIGNPFGLD----HTLTTGVISGLRREISSA---ATGRPIQDVIQT-----DAAINPGNSGG 281 (451)
Q Consensus 215 ~l~l~~s-~~~~~G~~V~~iG~p~g~~----~~~~~G~Vs~~~~~~~~~---~~~~~~~~~i~~-----d~~i~~G~SGG 281 (451)
|+.|... ..+..|..+++.||..... .......+.-+....... ........++-. ....+.|+|||
T Consensus 664 PIcLP~~~~~~~~g~~~~vsGWG~t~~~~~s~~L~~~~v~ii~~~~C~~~~~~~~~i~~~~iCAg~~~gg~daC~GDSGG 743 (791)
T 4dur_A 664 PACLPSPNYVVADRTECFITGWGETQGTFGAGLLKEAQLPVIENKVCNRYEFLNGRVQSTELCAGHLAGGTDSCQGDSGG 743 (791)
T ss_dssp CCBCCCTTCCCCTTCEEEEEECCCC---CCTTBCEEEEEEEECHHHHTSTTTTTTCCCTTEEEESCSSSCCCBCCSCTTC
T ss_pred eeeccCcccccCCCCEEEEEEeCCCCCCCCCCeeEEEEEEEeCHHHhhcccccCCCCCCCeEEeccCCCCCCCCCCCccc
Confidence 7777533 2356799999999874321 122333333222221111 111112334433 23567899999
Q ss_pred ceeCC-Cc--eEEEEEeeeeCCCCCccceeEEEeccCchhhHHHhhh
Q 013014 282 PLLDS-SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (451)
Q Consensus 282 Plvd~-~G--~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (451)
||+-. +| .|+||++++.. ++....-+...-+.....+|++.++
T Consensus 744 PLv~~~~~~~~LvGIvS~G~g-C~~~~~PgVYTrVs~y~dWI~~~i~ 789 (791)
T 4dur_A 744 PLVCFEKDKYILQGVTSWGLG-CARPNKPGVYVRVSRFVTWIEGVMR 789 (791)
T ss_dssp EEEEEETTEEEEEEECCTTTC-CBBTTBCEEEEEGGGTHHHHHHHHH
T ss_pred ceEEEeCCeEEEEEEEEeCCC-CCCCCCCeEEEEHHHHHHHHHHHHH
Confidence 99853 23 59999997642 2322345677888888888887664
No 147
>1x5q_A LAP4 protein; PDZ domain, scribble homolog protein, hscrib, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.97 E-value=4.4e-10 Score=93.54 Aligned_cols=63 Identities=19% Similarity=0.331 Sum_probs=53.6
Q ss_pred cceEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEcCCHHHHHHHHhcCCCCCEEEEEEEECCeEE
Q 013014 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDELLLQGIKQPPVL 423 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i~~~~dl~~~l~~~~~g~~v~l~v~R~g~~~ 423 (451)
.|++|.+|.+++||+++||++ ||+|++|||++|.+..++........+|++++|+|.|+|+.+
T Consensus 46 ~g~~V~~V~~~spA~~aGL~~-----------GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~g~~~ 108 (110)
T 1x5q_A 46 EGIFISRVSEEGPAARAGVRV-----------GDKLLEVNGVALQGAEHHEAVEALRGAGTAVQMRVWRESGPS 108 (110)
T ss_dssp CSEEEEEECTTSHHHHHTCCT-----------TCEEEEETTEECTTCCHHHHHHHHHSCCSEEEEEEEECSSCC
T ss_pred CCEEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCcCHHHHHHHhhCCCCeEEEEEEECCccC
Confidence 799999999999999999999 999999999999996554443332347999999999999754
No 148
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=98.95 E-value=1.3e-09 Score=86.61 Aligned_cols=73 Identities=22% Similarity=0.312 Sum_probs=60.7
Q ss_pred ccccceeccchhhhhhCccceEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEcCC--HHHHHHHHhcCCCC
Q 013014 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVG 409 (451)
Q Consensus 332 ~~lGi~~~~~~~~~~~~~~Gv~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i~~--~~dl~~~l~~~~~g 409 (451)
..+|+.+...... ..|++|.+|.++|||+++||++ ||+|++|||+++.+ +.++.+++....
T Consensus 12 ~~lG~~l~~~~~~----~~g~~V~~V~~~spA~~aGL~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~~~-- 74 (87)
T 2pa1_A 12 APWGFRITGGRDF----HTPIMVTKVAERGKAKDADLRP-----------GDIIVAINGESAEGMLHAEAQSKIRQSP-- 74 (87)
T ss_dssp SCCSEEEEEEGGG----TEEEEEEEECSSSHHHHTTCCT-----------TCEEEEETTEESTTCCHHHHHHHHHTCC--
T ss_pred CccCEEEecccCC----CCCEEEEEECCCChHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHcCC--
Confidence 3567776532111 2589999999999999999999 99999999999999 799999998753
Q ss_pred CEEEEEEEECCe
Q 013014 410 DELLLQGIKQPP 421 (451)
Q Consensus 410 ~~v~l~v~R~g~ 421 (451)
+++.++|.|+|+
T Consensus 75 ~~v~l~v~R~~~ 86 (87)
T 2pa1_A 75 SPLRLQLDRITS 86 (87)
T ss_dssp SSEEEEEEECCC
T ss_pred CeEEEEEEecCC
Confidence 889999999985
No 149
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=98.94 E-value=4.4e-10 Score=91.10 Aligned_cols=62 Identities=23% Similarity=0.356 Sum_probs=56.6
Q ss_pred cceEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEcCC--HHHHHHHHhcCCCCCEEEEEEEECCeEEE
Q 013014 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDELLLQGIKQPPVLS 424 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i~~--~~dl~~~l~~~~~g~~v~l~v~R~g~~~~ 424 (451)
.|++|.+|.++|||+++||++ ||+|++|||++|.+ +.++.+++.. .|+++.++|.|+|+..+
T Consensus 30 ~g~~V~~V~~~spA~~aGl~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~--~g~~v~l~v~r~~~~~~ 93 (96)
T 2v90_A 30 PGQFLWEVDPGLPAKKAGMQA-----------GDRLVAVAGESVEGLGHEETVSRIQG--QGSCVSLTVVDPEADRE 93 (96)
T ss_dssp EEEEEEEECTTSHHHHTTCCT-----------TEEEEEETTEECTTCCHHHHHHHHHT--TTTEEEEEEECCCTTSC
T ss_pred CCeEEEEECCCChHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCEEEEEEECCCCccc
Confidence 589999999999999999999 99999999999999 7899998876 38999999999987644
No 150
>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1
Probab=98.91 E-value=1.7e-09 Score=88.72 Aligned_cols=79 Identities=20% Similarity=0.344 Sum_probs=60.3
Q ss_pred ccccccceeccch--hhhhhCc---cceEEEecCCCCcccccC-ceeeecccCCCCCCCcEEEEECCEEcCC--HHHHHH
Q 013014 330 TRPILGIKFAPDQ--SVEQLGV---SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYR 401 (451)
Q Consensus 330 ~~~~lGi~~~~~~--~~~~~~~---~Gv~V~~v~~~s~a~~aG-l~~~~~~~~~~L~~GDiIl~vnG~~i~~--~~dl~~ 401 (451)
.++++|+.+.... .++.++. .|++|.+|.++|||+++| |++ ||+|++|||++|.+ +.++.+
T Consensus 14 ~~~~lG~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~-----------GD~I~~ing~~v~~~~~~~~~~ 82 (103)
T 2fcf_A 14 PSKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKP-----------GDRIVEVDGMDLRDASHEQAVE 82 (103)
T ss_dssp C-CCCCEEEECCCC-------------EEEEEECSSSHHHHHCCCCT-----------TCEEEEETTEECTTCCHHHHHH
T ss_pred CCCceeEEEEccCCCCcccccCCCCCCEEEEEeCCCCcHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHH
Confidence 3578898886521 2222222 699999999999999999 999 99999999999999 899999
Q ss_pred HHhcCCCCCEEEEEEEECCe
Q 013014 402 ILDQCKVGDELLLQGIKQPP 421 (451)
Q Consensus 402 ~l~~~~~g~~v~l~v~R~g~ 421 (451)
++... ++.+.++|.|+++
T Consensus 83 ~l~~~--~~~v~l~v~r~~~ 100 (103)
T 2fcf_A 83 AIRKA--GNPVVFMVQSIIS 100 (103)
T ss_dssp HHHTC--CSSEEEEEECCCC
T ss_pred HHHhC--CCcEEEEEEECCC
Confidence 99764 4589999999765
No 151
>1v5l_A PDZ and LIM domain 3; actinin alpha 2 associated LIM protein; PDZ domain, cytoskeleton, actin binding, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.90 E-value=1e-09 Score=90.18 Aligned_cols=76 Identities=17% Similarity=0.236 Sum_probs=63.6
Q ss_pred ccccceeccchhhhhhCccceEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEcCC--HHHHHHHHhcCCCC
Q 013014 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVG 409 (451)
Q Consensus 332 ~~lGi~~~~~~~~~~~~~~Gv~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i~~--~~dl~~~l~~~~~g 409 (451)
.++|+.+...... -.+++|.+|.+++||+++||++ ||+|++|||++|.+ +.++.+++... |
T Consensus 15 ~~lG~~l~~g~~~----~~~~~V~~V~~~spA~~aGL~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~~--g 77 (103)
T 1v5l_A 15 APWGFRLSGGIDF----NQPLVITRITPGSKAAAANLCP-----------GDVILAIDGFGTESMTHADAQDRIKAA--S 77 (103)
T ss_dssp SCCSBCCEEETTT----TEEEECSCBCTTSTTGGGTCCT-----------TCBEEEETTEECSSCCHHHHHHHHTTC--C
T ss_pred CCcCEEEeccccC----CCCeEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhC--C
Confidence 5677777532110 1478999999999999999999 99999999999999 99999999864 8
Q ss_pred CEEEEEEEECCeEEE
Q 013014 410 DELLLQGIKQPPVLS 424 (451)
Q Consensus 410 ~~v~l~v~R~g~~~~ 424 (451)
+++.++|.|+|+.+.
T Consensus 78 ~~v~l~v~R~g~~~~ 92 (103)
T 1v5l_A 78 YQLCLKIDRAETRLW 92 (103)
T ss_dssp SEEECEECCCTTTTS
T ss_pred CeEEEEEEECCeEcc
Confidence 999999999997543
No 152
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=98.90 E-value=2.1e-09 Score=114.95 Aligned_cols=71 Identities=23% Similarity=0.346 Sum_probs=65.5
Q ss_pred cceEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEcCCHHHHHHHHhcCCCCCEEEEEEEECCeEEEEEEEe
Q 013014 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDELLLQGIKQPPVLSDNLRL 429 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i~~~~dl~~~l~~~~~g~~v~l~v~R~g~~~~~~v~l 429 (451)
.|++|.+|.++|||+++||++ ||+|++|||++| +..++.+++...++|++|+++|.|+|+.+++++++
T Consensus 496 ~gv~V~~V~~~spA~~AGL~~-----------GD~I~aInG~~v-~~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~l 563 (597)
T 4fgm_A 496 QGLDVLNVYHDESAYHAGLSA-----------GDKIIAIDHLQA-TEQSVKRILERYIPGDTVTIHAFRRDELMTLELTW 563 (597)
T ss_dssp TEEEEEEECTTSHHHHHTCCT-----------TCEEEEETTEEC-CTTTHHHHHTTCCTTCEEEEEEEETTEEEEEEEEC
T ss_pred CeEEEEEeCCCChHHHCCCCC-----------CCEEEEECCEEC-CHHHHHHHHHhcCCCCEEEEEEEECCEEEEEEEEe
Confidence 479999999999999999999 999999999999 58899999988788999999999999999999987
Q ss_pred eec
Q 013014 430 LWS 432 (451)
Q Consensus 430 ~~~ 432 (451)
...
T Consensus 564 ~~~ 566 (597)
T 4fgm_A 564 QEP 566 (597)
T ss_dssp CCC
T ss_pred cCC
Confidence 543
No 153
>2f83_A Coagulation factor XI; protease, apple domain, hydrolase; HET: NAG; 2.87A {Homo sapiens} PDB: 2j8j_A 2j8l_A
Probab=98.90 E-value=1.7e-08 Score=108.81 Aligned_cols=172 Identities=18% Similarity=0.210 Sum_probs=97.2
Q ss_pred CeEEEEEEEcCCCeEEecccccCCC---CcEEEEeCC---------CcEEEEEEEEEcCC-------CCEEEEEEcCCC-
Q 013014 151 QGSGSGFVWDSKGHVVTNYHVIRGA---SDIRVTFAD---------QSAYDAKIVGFDQD-------KDVAVLRIDAPK- 210 (451)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHVv~~~---~~i~V~~~d---------g~~~~a~vv~~d~~-------~DlAlLkv~~~~- 210 (451)
...+.|.||+++ ||||+|||+.+. ..+.|.+.. +..+..+-+..|+. +|||||+++.+.
T Consensus 413 ~~~CgGsLIs~~-~VLTAAHC~~~~~~~~~~~V~~G~~~~~~~~~~~~~~~V~~ii~Hp~y~~~~~~nDIALlkL~~pv~ 491 (625)
T 2f83_A 413 RHLCGGSIIGNQ-WILTAAHCFYGVESPKILRVYSGILNQSEIKEDTSFFGVQEIIIHDQYKMAESGYDIALLKLETTVN 491 (625)
T ss_dssp EEEEEEEECSSS-EEEECGGGGSSCCCGGGEEEEESCSBGGGCCSSCCCEEEEEEEECTTCCBTTTBCCCEEEEESSCCC
T ss_pred cEEEEEEEECCC-EEEEcHHhCCCCCCCceEEEEEEeccCCCCCCCceEEeEEEEEECCccCcCCccccEEEEEECCccc
Confidence 357999999976 999999999753 346676532 23455666666654 499999998764
Q ss_pred --CCCcceecCCCC-CCCCCcEEEEeeCCCCCC-----CceEEeEEeeeeeeecc--CCCCCCcccEE-----EEcccCC
Q 013014 211 --DKLRPIPIGVSA-DLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISS--AATGRPIQDVI-----QTDAAIN 275 (451)
Q Consensus 211 --~~~~~l~l~~s~-~~~~G~~V~~iG~p~g~~-----~~~~~G~Vs~~~~~~~~--~~~~~~~~~~i-----~~d~~i~ 275 (451)
....|+.|.... ....|+.+++.||..... .......+.-+...... +........++ .-....+
T Consensus 492 ~~~~v~PicLp~~~~~~~~~~~~~v~GWG~~~~~~~~s~~L~~~~v~i~~~~~C~~~~~~~~i~~~~iCag~~~~~~d~C 571 (625)
T 2f83_A 492 YTDSQRPICLPSKGDRNVIYTDCWVTGWGYRKLRDKIQNTLQKAKIPLVTNEECQKRYRGHKITHKMICAGYREGGKDAC 571 (625)
T ss_dssp CBTTBCCCBCCCGGGTTCCCCCEEECBCC------CCCSBCBCCEECCCCHHHHHTTCTTSCCCTTBCCC----------
T ss_pred CCCceeeeEcCCccCCccCCCEEEEEEecCCCCCCcCCcccEEEEEEEcCHHHHHHHhccCCCCCCeEEeecCCCCCcCC
Confidence 235677775432 245688899999864321 11222222211111110 00000001111 1124567
Q ss_pred CCCCCCceeCC-Cc--eEEEEEeeeeCCCCCccceeEEEeccCchhhHHHhh
Q 013014 276 PGNSGGPLLDS-SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLV 324 (451)
Q Consensus 276 ~G~SGGPlvd~-~G--~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~ 324 (451)
.|+|||||+-. +| .++||++++.. ++.....+...-+....+||++.+
T Consensus 572 ~GDSGGPLv~~~~~~~~lvGIvS~G~~-C~~~~~P~vyT~V~~y~~WI~~~~ 622 (625)
T 2f83_A 572 KGDSGGPLSCKHNEVWHLVGITSWGEG-CAQRERPGVYTNVVEYVDWILEKT 622 (625)
T ss_dssp CCCTTCEEEEEETTEEEEEEEEEECCC-----CCCCEEEEGGGGHHHHHHTC
T ss_pred CCCcccceEEEECCeEEEEEEEEeCCC-CCCCCCCeEEEEHHHHHHHHHHHH
Confidence 89999999853 45 59999998643 332233456677778888887644
No 154
>3tsv_A Tight junction protein ZO-1; PDZ, scaffolding, JAM, cell adhesion; 1.99A {Homo sapiens} PDB: 3shu_A
Probab=98.89 E-value=1.8e-09 Score=92.07 Aligned_cols=62 Identities=29% Similarity=0.379 Sum_probs=57.7
Q ss_pred cceEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEcCCH--HHHHHHHhcCCCCCEEEEEEEECCeE
Q 013014 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVGDELLLQGIKQPPV 422 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i~~~--~dl~~~l~~~~~g~~v~l~v~R~g~~ 422 (451)
.|++|.+|.++|||+++||++ ||+|++|||++|.++ +++.+++....+|++++++|.|+++.
T Consensus 51 ~gv~V~~V~~gspA~~aGL~~-----------GD~Il~Vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~~~ 114 (124)
T 3tsv_A 51 VGIFVAGVLEDSPAAKEGLEE-----------GDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTILAQKKKDV 114 (124)
T ss_dssp SCEEEEEECTTCHHHHTTCCT-----------TEEEEEETTEECSSCCHHHHHHHHHHSCTTCEEEEEEEECHHH
T ss_pred CCEEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEEEEECCch
Confidence 689999999999999999999 999999999999999 89999888767899999999998764
No 155
>1rrk_A Complement factor B; BB, hydrolase; 2.00A {Homo sapiens} SCOP: b.47.1.2 c.62.1.1 PDB: 1rs0_A* 1rtk_A* 2win_I* 1dle_A
Probab=98.88 E-value=9.2e-09 Score=107.36 Aligned_cols=177 Identities=18% Similarity=0.179 Sum_probs=102.4
Q ss_pred CeEEEEEEEcCCCeEEecccccCCC---CcEEEEeCC-CcEEEEEEEEEcC----------------CCCEEEEEEcCCC
Q 013014 151 QGSGSGFVWDSKGHVVTNYHVIRGA---SDIRVTFAD-QSAYDAKIVGFDQ----------------DKDVAVLRIDAPK 210 (451)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHVv~~~---~~i~V~~~d-g~~~~a~vv~~d~----------------~~DlAlLkv~~~~ 210 (451)
...|.|.+|+++ ||||+|||+.+. ..+.|.+.. .+.+..+-+..|+ .+|||||+++.+.
T Consensus 241 ~~~CgGsLIs~~-~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~v~~i~~Hp~y~~~~~~~~~~~~~~~nDIALl~L~~~v 319 (497)
T 1rrk_A 241 HESCMGAVVSEY-FVLTAAHCFTVDDKEHSIKVSVGGEKRDLEIEVVLFHPNYNINGKKEAGIPEFYDYDVALIKLKNKL 319 (497)
T ss_dssp CEEEEEEECSSS-EEEECGGGCCTTCCGGGEEEEETTCSSCEEEEEEEECTTCCTTTTGGGTCSSCCTTCCEEEEESSCC
T ss_pred CceeEEEEecCC-EEEECHHhCCCCCCceEEEEEeCCccceeeeEEEEeCCCccccccccccccccCCCcEEEEEECCCC
Confidence 457999999986 999999999753 468888865 3456666555553 2499999998764
Q ss_pred ---CCCcceecCCCC------CCCCCcEEEEeeCCCCC------------CCceEEeEEeeee---eeecc--------C
Q 013014 211 ---DKLRPIPIGVSA------DLLVGQKVYAIGNPFGL------------DHTLTTGVISGLR---REISS--------A 258 (451)
Q Consensus 211 ---~~~~~l~l~~s~------~~~~G~~V~~iG~p~g~------------~~~~~~G~Vs~~~---~~~~~--------~ 258 (451)
..+.|+.|.... .+..|..+++.|+.... ........+.-+. ...+. +
T Consensus 320 ~~~~~v~picLp~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~L~~~~v~i~~~~~~~~C~~~~~~~~~~ 399 (497)
T 1rrk_A 320 KYGQTIRPICLPCTEGTTRALRLPPTTTCQQQKEELLPAQDIKALFVSEEEKKLTRKEVYIKNGDKKGSCERDAQYAPGY 399 (497)
T ss_dssp CCBTTBCCCBCTTBHHHHHHTTCCTTCCHHHHHHHHSCSSEEEEEEEEESSSCEEEEEEEEECSTTHHHHHHGGGGSTTC
T ss_pred cCCCCeeeeeCCCCCccccccccCCCCchhcccccccCCccccceeeccCCCcceeeeEEEecCcccchhhhhhhhcccc
Confidence 246677775321 23456555444432110 1112222222111 00110 1
Q ss_pred CC-----CCCcccEEEEc-------ccCCCCCCCCceeCC-Cc--eEEEEEeeeeC-CCC------Cccce--eEEEecc
Q 013014 259 AT-----GRPIQDVIQTD-------AAINPGNSGGPLLDS-SG--SLIGINTAIYS-PSG------ASSGV--GFSIPVD 314 (451)
Q Consensus 259 ~~-----~~~~~~~i~~d-------~~i~~G~SGGPlvd~-~G--~VVGI~s~~~~-~~~------~~~~~--~~aIP~~ 314 (451)
.. ......++... ...|.|+|||||+-. +| .++||+|++.. .|+ ...++ +....+.
T Consensus 400 ~~~~~~~~~~~~~~iCag~~~~~~~~~~C~GDSGGPL~~~~~~~~~l~GIvS~g~~~~C~~~~~~~~~P~~~r~vyt~V~ 479 (497)
T 1rrk_A 400 DKVKDISEVVTPRFLCTGGVSPYADPNTCRGDSGGPLIVHKRSRFIQVGVISWGVVDVCKNQKRQKQVPAHARDFHINLF 479 (497)
T ss_dssp TTCSCGGGTSCTTEEEEESSSSSCCCCCCGGGTTCEEEEEETTEEEEEEEEEEESCCCC--------CCTTCEEEEEEGG
T ss_pred cccccccccCCCCeEEeCCCCCCCCCcCCCCCCCCeeEEEeCCEEEEEEEEEecCCCCCCCccccCCCCCccceeeeeHH
Confidence 00 00113445442 357889999999853 34 49999998753 343 11111 2567788
Q ss_pred CchhhHHHhhhccc
Q 013014 315 TVNGIVDQLVKFGK 328 (451)
Q Consensus 315 ~i~~~l~~l~~~g~ 328 (451)
...+||++.++...
T Consensus 480 ~~~~WI~~~~~~~~ 493 (497)
T 1rrk_A 480 QVLPWLKEKLQDED 493 (497)
T ss_dssp GGHHHHHHHTTTSS
T ss_pred HHHHHHHHHhCccc
Confidence 88889888766543
No 156
>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.88 E-value=1.2e-09 Score=88.30 Aligned_cols=75 Identities=23% Similarity=0.275 Sum_probs=61.6
Q ss_pred ccccceeccchhhhhhCccceEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEcCCH--HHHHHHHhcCCCC
Q 013014 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVG 409 (451)
Q Consensus 332 ~~lGi~~~~~~~~~~~~~~Gv~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i~~~--~dl~~~l~~~~~g 409 (451)
..+|+.+..... ...|++|.+|.+++||+++||++ ||+|++|||++|.++ .++.+++... +
T Consensus 16 ~~lG~~l~~g~~----~~~g~~V~~V~~~spA~~aGL~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~~--~ 78 (94)
T 1vb7_A 16 APWGFRISGGRD----FHTPIIVTKVTERGKAEAADLRP-----------GDIIVAINGQSAENMLHAEAQSKIRQS--A 78 (94)
T ss_dssp SCCSBCCEEETT----TTEEEECCCBCTTSSHHHHTCCT-----------TCEEEEETTEECTTCCHHHHHHHHHTC--C
T ss_pred CCccEEEecccC----CCCCeEEEEECCCCHHHHCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhC--C
Confidence 456777654211 12589999999999999999999 999999999999998 8999888764 3
Q ss_pred CEEEEEEEECCeEE
Q 013014 410 DELLLQGIKQPPVL 423 (451)
Q Consensus 410 ~~v~l~v~R~g~~~ 423 (451)
+++.++|.|+|+..
T Consensus 79 ~~v~l~v~R~g~~~ 92 (94)
T 1vb7_A 79 SPLRLQLDRSSGPS 92 (94)
T ss_dssp SSEEEEEECCCCCC
T ss_pred CcEEEEEEECCcCC
Confidence 88999999998753
No 157
>3hrz_D Complement factor B; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Homo sapiens} PDB: 2xwj_I* 3hs0_D* 2ok5_A* 2xwb_F*
Probab=98.88 E-value=8.8e-09 Score=112.84 Aligned_cols=176 Identities=18% Similarity=0.193 Sum_probs=102.3
Q ss_pred CeEEEEEEEcCCCeEEecccccCC---CCcEEEEeC-CCcEEEEEEEEEcCC----------------CCEEEEEEcCCC
Q 013014 151 QGSGSGFVWDSKGHVVTNYHVIRG---ASDIRVTFA-DQSAYDAKIVGFDQD----------------KDVAVLRIDAPK 210 (451)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHVv~~---~~~i~V~~~-dg~~~~a~vv~~d~~----------------~DlAlLkv~~~~ 210 (451)
...|.|.+|+++ ||||+|||+.+ ...+.|.+. ..+.+..+-+..|+. +|||||+++.+.
T Consensus 483 ~~~CgGsLIs~~-~VLTAAHC~~~~~~~~~~~V~~G~~~~~~~v~~i~~Hp~y~~~~~~~~~~~~~~~nDIALlkL~~pv 561 (741)
T 3hrz_D 483 HESCMGAVVSEY-FVLTAAHCFTVDDKEHSIKVSVGGEKRDLEIEVVLFHPNYNINGKKEAGIPEFYDYDVALIKLKNKL 561 (741)
T ss_dssp ---EEEEECSSS-EEEECGGGCC-----CCEEEEETTCSCCEEEEEEEECTTCCTTTTGGGTCSCCCTTCCEEEEESSCC
T ss_pred CCEEEEEEecCC-EEEEchhhccccCCcceEEEEeCCCceEEEEEEEEECCCCCcccccccccCCccCCcEEEEEECCcC
Confidence 457999999987 99999999974 456788886 345566666666643 499999998754
Q ss_pred ---CCCcceecCCC------CCCCCCcEEEEeeCCCCCCCc------------eEEeEEeeee---eeec--------cC
Q 013014 211 ---DKLRPIPIGVS------ADLLVGQKVYAIGNPFGLDHT------------LTTGVISGLR---REIS--------SA 258 (451)
Q Consensus 211 ---~~~~~l~l~~s------~~~~~G~~V~~iG~p~g~~~~------------~~~G~Vs~~~---~~~~--------~~ 258 (451)
..+.|+.|... ..+..|..+.+.||....... .....+.-.. +... .+
T Consensus 562 ~~s~~v~picLp~~~~~~~~~~~~~~~~~~~~gwg~~~~~~~~~~~~~~~~~~L~~~~v~i~~~~~~~~C~~~~~~~~~~ 641 (741)
T 3hrz_D 562 KYGQTIRPICLPCTEGTTRALRLPPTTTCQQQKEELLPAQDIKALFVSEEEKKLTRKEVYIKNGDKKGSCERDAQYAPGY 641 (741)
T ss_dssp CCCSSCCCCBCTTBHHHHHHTTCCTTCCHHHHHHHHSCSSEEEEEEEEESSSCEEEEEEEEECSTTHHHHHHGGGGSTTC
T ss_pred cCCCCccccccCCcccccchhccCCCCccccccccccccccccceeccccccccccceeEeecCcccchhhhhhhhcccc
Confidence 24566666422 124556666666654222111 1111111111 0000 00
Q ss_pred CC-----CCCcccEEEE-------cccCCCCCCCCceeCC-Cc--eEEEEEeeee-CCCCC---ccce-----eEEEecc
Q 013014 259 AT-----GRPIQDVIQT-------DAAINPGNSGGPLLDS-SG--SLIGINTAIY-SPSGA---SSGV-----GFSIPVD 314 (451)
Q Consensus 259 ~~-----~~~~~~~i~~-------d~~i~~G~SGGPlvd~-~G--~VVGI~s~~~-~~~~~---~~~~-----~~aIP~~ 314 (451)
.. ......++-. +...+.|+|||||+-. +| .++||+|++. ..++. .... ++...+.
T Consensus 642 ~~~~~~~~~i~~~~lCag~~~~~~~~~~C~GDSGGPL~~~~~~~~~lvGIvS~G~~~~C~~~~~~~~p~~~~~~vyt~V~ 721 (741)
T 3hrz_D 642 DKVKDISEVVTPRFLCTGGVSPYADPNTCRGDSGGPLIVHKRSRFIQVGVISWGVVDVCKNQKRQKQVPAHARDFHINLF 721 (741)
T ss_dssp TTCSSGGGTSCTTEEEEESSSSSCCCCCCGGGTTCEEEEEETTEEEEEEEEEEESSCCCC------CCCTTCEEEEEEGG
T ss_pred ccccccccccCCCeEecCCcCCCCCCCcCcCcccCceEEeeCCeEEEEEEEeecCCcccCCcccccCCCCCccceEEEhH
Confidence 00 0111334443 2347889999999954 33 3999999885 23432 1223 6788899
Q ss_pred CchhhHHHhhhcc
Q 013014 315 TVNGIVDQLVKFG 327 (451)
Q Consensus 315 ~i~~~l~~l~~~g 327 (451)
..++||++.++..
T Consensus 722 ~~~~WI~~~i~~~ 734 (741)
T 3hrz_D 722 QVLPWLKEKLQDE 734 (741)
T ss_dssp GSHHHHHHHTTTS
T ss_pred HhHHHHHHHhcCC
Confidence 9999999887654
No 158
>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1
Probab=98.88 E-value=2.2e-09 Score=87.21 Aligned_cols=59 Identities=27% Similarity=0.421 Sum_probs=53.1
Q ss_pred cceEEEecCCCCcccccC-ceeeecccCCCCCCCcEEEEECCEEcCCH--HHHHHHHhcCCCCCEEEEEEEECCe
Q 013014 350 SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVGDELLLQGIKQPP 421 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aG-l~~~~~~~~~~L~~GDiIl~vnG~~i~~~--~dl~~~l~~~~~g~~v~l~v~R~g~ 421 (451)
.|++|.+|.++|||+++| |++ ||+|++|||++|.++ .++..++.. +|+++.++|.|+|+
T Consensus 37 ~g~~V~~V~~~spA~~aG~L~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~--~g~~v~l~v~R~g~ 98 (98)
T 1ihj_A 37 TGIFIKGIVPDSPAHLCGRLKV-----------GDRILSLNGKDVRNSTEQAVIDLIKE--ADFKIELEIQTFDK 98 (98)
T ss_dssp EEEEEEEECTTSHHHHHCSCCT-----------TCEEEEETTEECTTCCHHHHHHHHHH--SCSEEEEEEEEC--
T ss_pred CCEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHhc--CCCeEEEEEEeCCC
Confidence 689999999999999999 999 999999999999997 788888875 68999999999874
No 159
>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A
Probab=98.88 E-value=2.4e-09 Score=83.51 Aligned_cols=64 Identities=19% Similarity=0.383 Sum_probs=54.1
Q ss_pred hhhhCc---cceEEEecCCCCcccccC-ceeeecccCCCCCCCcEEEEECCEEcC--CHHHHHHHHhcCCCCCEEEEEEE
Q 013014 344 VEQLGV---SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCKVGDELLLQGI 417 (451)
Q Consensus 344 ~~~~~~---~Gv~V~~v~~~s~a~~aG-l~~~~~~~~~~L~~GDiIl~vnG~~i~--~~~dl~~~l~~~~~g~~v~l~v~ 417 (451)
.+.+|+ .|++|.++.+++||+++| |++ ||+|++|||+++. ++.++.+++... ++.+.++|.
T Consensus 12 ~~~~g~~~~~gv~V~~v~~~s~A~~aG~l~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~~--~~~v~l~v~ 78 (81)
T 2rcz_A 12 NEEYGLRLASHIFVKEISQDSLAARDGNIQE-----------GDVVLKINGTVTENMSLTDAKTLIERS--KGKLKMVVQ 78 (81)
T ss_dssp TCCCCEEEEEEEEEEEECTTSHHHHHSSCCT-----------TCEEEEETTEECTTCCHHHHHHHHHTS--TTEEEEEEE
T ss_pred CCCCCEEEeCCEEEEEECCCChHHHCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHCC--CCeEEEEEE
Confidence 344454 689999999999999999 999 9999999999999 999999988763 459999999
Q ss_pred ECC
Q 013014 418 KQP 420 (451)
Q Consensus 418 R~g 420 (451)
|+|
T Consensus 79 R~g 81 (81)
T 2rcz_A 79 RDE 81 (81)
T ss_dssp C--
T ss_pred eCC
Confidence 875
No 160
>3sfj_A TAX1-binding protein 3; PDZ:peptide complex, signaling protein-inhibitor complex; 1.24A {Homo sapiens} PDB: 3dj3_A
Probab=98.88 E-value=2e-09 Score=88.47 Aligned_cols=78 Identities=26% Similarity=0.352 Sum_probs=62.2
Q ss_pred ccccccceecc---chhhh-hh----CccceEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEcCC--HHHH
Q 013014 330 TRPILGIKFAP---DQSVE-QL----GVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDL 399 (451)
Q Consensus 330 ~~~~lGi~~~~---~~~~~-~~----~~~Gv~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i~~--~~dl 399 (451)
.+++||+.+.. ...++ .+ ...|++|.+|.++|||+++||++ ||+|++|||+++.+ ++++
T Consensus 17 ~~~~lG~~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGl~~-----------GD~I~~ing~~v~~~~~~~~ 85 (104)
T 3sfj_A 17 ENLILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAGLQI-----------GDKIMQVNGWDMTMVTHDQA 85 (104)
T ss_dssp TEEECSEEEEECTTSCGGGCSSCSSTTCCSEEEEEECTTSHHHHHTCCT-----------TCEEEEETTEECTTCCHHHH
T ss_pred CCCcccEEEECccccCccccccccCCCCCCEEEEEECCCChHHHcCCCC-----------CCEEEEECCEECCCCCHHHH
Confidence 45688988872 11111 12 23799999999999999999999 99999999999966 5599
Q ss_pred HHHHhcCCCCCEEEEEEEEC
Q 013014 400 YRILDQCKVGDELLLQGIKQ 419 (451)
Q Consensus 400 ~~~l~~~~~g~~v~l~v~R~ 419 (451)
...+.. ..|+.+.++|.|+
T Consensus 86 ~~~l~~-~~g~~v~l~v~R~ 104 (104)
T 3sfj_A 86 RKRLTK-RSEEVVRLLVTRQ 104 (104)
T ss_dssp HHHHTC-TTCSEEEEEEEEC
T ss_pred HHHHHh-CCCCEEEEEEEcC
Confidence 888876 5789999999984
No 161
>2xrc_A Human complement factor I; immune system, hydrolase, conglutinogen activating factor, S protease, complement system; HET: NAG; 2.69A {Homo sapiens}
Probab=98.87 E-value=2.7e-08 Score=105.94 Aligned_cols=172 Identities=14% Similarity=0.095 Sum_probs=89.1
Q ss_pred eEEEEEEEcCCCeEEecccccCCC--CcEEEEeCC----------CcEEEEEEEEEcCC-------CCEEEEEEcCCCC-
Q 013014 152 GSGSGFVWDSKGHVVTNYHVIRGA--SDIRVTFAD----------QSAYDAKIVGFDQD-------KDVAVLRIDAPKD- 211 (451)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHVv~~~--~~i~V~~~d----------g~~~~a~vv~~d~~-------~DlAlLkv~~~~~- 211 (451)
..+.|.||+++ +|||||||+.+. ..+.|.+.. ...+..+-+..|+. +|||||+++.+..
T Consensus 345 ~~CGGsLIs~~-~VLTAAHCv~~~~~~~~~V~~G~~~~~~~~~~~~~~~~V~~ii~Hp~Y~~~~~~nDIALlkL~~~v~~ 423 (565)
T 2xrc_A 345 ITCGGIYIGGC-WILTAAHCLRASKTHRYQIWTTVVDWIHPDLKRIVIEYVDRIIFHENYNAGTYQNDIALIEMKKDGNK 423 (565)
T ss_dssp CCCCCEEEETT-EEEECHHHHTTCSSCCEEEEC-------------CEEEEEEEEECTTCCTTTCTTCCEEEEECCCSSS
T ss_pred eeeeEEEEeCC-EEEEChhhcccCCCcceEEEEEEeeccCCCCCccEEEEEEEEEeCCCCCCCcccccceeeeecccccc
Confidence 46999999987 999999999754 345665431 23445555566654 4999999987531
Q ss_pred ------CCcceecCCC-CCCCCCcEEEEeeCCCCCCC----ceEEeEEeeeeeeeccCCCCCCcccEEEE-----cccCC
Q 013014 212 ------KLRPIPIGVS-ADLLVGQKVYAIGNPFGLDH----TLTTGVISGLRREISSAATGRPIQDVIQT-----DAAIN 275 (451)
Q Consensus 212 ------~~~~l~l~~s-~~~~~G~~V~~iG~p~g~~~----~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~-----d~~i~ 275 (451)
...|+.|... ..+..|+.+++.||...... ......+.-+..-...+........++-. ....+
T Consensus 424 ~~~~~~~v~PicLp~~~~~~~~g~~~~v~GWG~t~~~~~~~~L~~~~v~i~~~C~~~~~~~~~~~~~iCAg~~~g~~d~C 503 (565)
T 2xrc_A 424 KDCELPRSIPACVPWSPYLFQPNDTCIVSGWGREKDNERVFSLQWGEVKLISNCSKFYGNRFYEKEMECAGTYDGSIDAC 503 (565)
T ss_dssp SCSCCTTCCCCBCCSCTTSSCTTCEEEEEC-------------CEEEEEECSCTHHHHTTSCCTTTEEEEEEC-------
T ss_pred ccccccceeeeecCCcccccCCCCEEEEEeCccCCCCCccceeeEEeeeehHHhHHhhccCcCCCceEEeCCCCCCCccC
Confidence 2356656432 23567999999998643221 11222222111000000000000113322 13567
Q ss_pred CCCCCCceeCC--Cc--eEEEEEeeeeCCCCCccceeEEEeccCchhhHHHhhh
Q 013014 276 PGNSGGPLLDS--SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (451)
Q Consensus 276 ~G~SGGPlvd~--~G--~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (451)
.|+|||||+-. +| .|+||+|++.. ++.....+...-+.....||++.+.
T Consensus 504 ~GDSGGPLv~~~~~~~~~lvGIvS~G~~-C~~~~~PgVYTrVs~y~~WI~~~i~ 556 (565)
T 2xrc_A 504 KGDSGGPLVCMDANNVTYVWGVVSWGEN-CGKPEFPGVYTKVANYFDWISYHVG 556 (565)
T ss_dssp ---CCCEEEEECTTCCEEEEEEECC-------CCCCEEEEEGGGGHHHHHHHC-
T ss_pred CCccccceEEEeCCCcEEEEEEEeeCCC-CCCCCCCEEEEEHHHHHHHHHHHhc
Confidence 89999999842 45 38999998643 3322335667778888888877654
No 162
>2yub_A LIMK-2, LIM domain kinase 2; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.86 E-value=7.4e-10 Score=93.64 Aligned_cols=63 Identities=21% Similarity=0.229 Sum_probs=58.1
Q ss_pred cceEEEecCC--CCcccccCceeeecccCCCCCCCcEEEEECCEEcCCH--HHHHHHHhcCCCCCEEEEEEEECCeEEEE
Q 013014 350 SGVLVLDAPP--NGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVGDELLLQGIKQPPVLSD 425 (451)
Q Consensus 350 ~Gv~V~~v~~--~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i~~~--~dl~~~l~~~~~g~~v~l~v~R~g~~~~~ 425 (451)
.|++|.+|.+ ++||+++||++ ||+|++|||++|.++ .|+.+++... |+++.++|.|+|+..++
T Consensus 44 ~gv~V~~V~~~~~spA~~aGL~~-----------GD~Il~Vng~~v~~~~~~dl~~~l~~~--g~~v~l~v~R~g~~~~~ 110 (118)
T 2yub_A 44 TTVQVKEVNRMHISPNNRNAIHP-----------GDRILEINGTPVRTLRVEEVEDAIKQT--SQTLQLLIEHDPVPQRL 110 (118)
T ss_dssp CEEEEEECCTTTSCTTHHHHCCT-----------TCCEEEESSSBTTTSCHHHHHHHHHCC--SSCEEEEEEECSSCCCC
T ss_pred CcEEEEEecCCCCChHHHcCCCC-----------CCEEEEECCEECCCcCHHHHHHHHHhC--CCEEEEEEEECCEEEee
Confidence 6899999999 99999999999 999999999999999 9999999875 88999999999986543
No 163
>1v5q_A GRIP1 homolog, glutamate receptor interacting protein 1A-L homolog; PDZ domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.86 E-value=2.1e-09 Score=91.20 Aligned_cols=62 Identities=19% Similarity=0.265 Sum_probs=57.0
Q ss_pred cceEEEecCCCCcccccC-ceeeecccCCCCCCCcEEEEECCEEcCC--HHHHHHHHhcCCCCCEEEEEEEECCeE
Q 013014 350 SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDELLLQGIKQPPV 422 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aG-l~~~~~~~~~~L~~GDiIl~vnG~~i~~--~~dl~~~l~~~~~g~~v~l~v~R~g~~ 422 (451)
.+++|.+|.+++||+++| |++ ||+|++|||++|.+ ++|+.+++....+|++++|+|.|+++.
T Consensus 45 ~~~~V~~V~~~spA~~aG~L~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~~~ 109 (122)
T 1v5q_A 45 SPPLISYIEADSPAERCGVLQI-----------GDRVMAINGIPTEDSTFEEANQLLRDSSITSKVTLEIEFDVAE 109 (122)
T ss_dssp SCCEEEEECTTSHHHHSCCCCT-----------TCCEEEETTEESSSSCHHHHHHHHHHHTTTTCEEEEEEEECCC
T ss_pred CCcEEEEECCCChHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEECCcc
Confidence 468999999999999999 999 99999999999988 999999998876699999999998864
No 164
>2jre_A C60-1 PDZ domain peptide; de novo protein; NMR {Synthetic}
Probab=98.85 E-value=2.3e-09 Score=88.70 Aligned_cols=79 Identities=25% Similarity=0.377 Sum_probs=61.5
Q ss_pred ccccceeccchhhhhh-CccceEEEecCCCCcccccC-ceeeecccCCCCCCCcEEEEECCEEcCC--HHHHHHHHhcCC
Q 013014 332 PILGIKFAPDQSVEQL-GVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCK 407 (451)
Q Consensus 332 ~~lGi~~~~~~~~~~~-~~~Gv~V~~v~~~s~a~~aG-l~~~~~~~~~~L~~GDiIl~vnG~~i~~--~~dl~~~l~~~~ 407 (451)
..||+.+......... ...|++|.+|.+++||+++| |++ ||+|++|||++|.+ +.++..++..
T Consensus 25 ~~lG~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~-----------GD~I~~vng~~v~~~~~~~~~~~l~~-- 91 (108)
T 2jre_A 25 SSLGISISGMRDQSTTGEATGIYVKSLIPGSAAALDGRIEP-----------NDKILRVDDVNVQGMAQSDVVEVLRN-- 91 (108)
T ss_dssp SCCSEEEECCCCCSCSSCCCCCEEEEECTTSHHHHHSSCCS-----------SEEEEEETTEECTTSCHHHHHHHHHH--
T ss_pred CCcCEEEEcccCCCCCCCCCCEEEEEeCCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--
Confidence 3566666532111111 23699999999999999999 999 99999999999998 5788887765
Q ss_pred CCCEEEEEEEECCeEE
Q 013014 408 VGDELLLQGIKQPPVL 423 (451)
Q Consensus 408 ~g~~v~l~v~R~g~~~ 423 (451)
.|+.+.++|.|+++.+
T Consensus 92 ~g~~v~l~v~R~~~~~ 107 (108)
T 2jre_A 92 AGNPVRLLLIRRLPLL 107 (108)
T ss_dssp HCSEEEEEEEECCCCC
T ss_pred CCCeEEEEEEeCCcCC
Confidence 6899999999998653
No 165
>2dls_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; PDZ domain, arhgef11, KIAA0380, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2omj_A 2os6_A
Probab=98.85 E-value=2.9e-09 Score=85.77 Aligned_cols=60 Identities=37% Similarity=0.459 Sum_probs=51.9
Q ss_pred cceEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEcCCHHHHHHHHhcCCCCCEEEEEEEECCe
Q 013014 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDELLLQGIKQPP 421 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i~~~~dl~~~l~~~~~g~~v~l~v~R~g~ 421 (451)
.|++|.+|.+++||+++||++ ||+|++|||++|.++.++ +++...+.|++++++|.|++.
T Consensus 29 ~g~~V~~V~~~spA~~aGL~~-----------GD~I~~ing~~v~~~~~~-~~~~~~~~g~~v~l~v~R~~~ 88 (93)
T 2dls_A 29 RIVLVQSVRPGGAAMKAGVKE-----------GDRIIKVNGTMVTNSSHL-EVVKLIKSGAYVALTLLGSSS 88 (93)
T ss_dssp SSCEEEEECSSSTTTTTTCCS-----------SCEEEEETTEECSSSCHH-HHHHHHTSSSEEEEEEECCCC
T ss_pred CCEEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHH-HHHHhhcCCCEEEEEEEECCC
Confidence 589999999999999999999 999999999999997654 344444579999999999864
No 166
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=98.85 E-value=4e-09 Score=83.91 Aligned_cols=59 Identities=14% Similarity=0.189 Sum_probs=53.3
Q ss_pred cceEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEcCCH--HHHHHHHhcCCCCCEEEEEEEECCe
Q 013014 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVGDELLLQGIKQPP 421 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i~~~--~dl~~~l~~~~~g~~v~l~v~R~g~ 421 (451)
.|++|.+|.+++||+++||++ ||+|++|||+++.++ .++...+.. .|+++.++|.|+|+
T Consensus 27 ~~~~V~~V~~~spA~~aGl~~-----------GD~I~~ing~~v~~~~~~~~~~~~~~--~g~~v~l~v~R~g~ 87 (88)
T 2uzc_A 27 MPLTISSLKDGGKAAQANVRI-----------GDVVLSIDGINAQGMTHLEAQNKIKG--CTGSLNMTLQRESD 87 (88)
T ss_dssp EEEEEEEECTTSHHHHTTCCT-----------TCEEEEETTEECTTCCHHHHHHHHHT--CCSEEEEEEECCCC
T ss_pred CCeEEEEECCCChHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHh--CCCeEEEEEEeCCC
Confidence 579999999999999999999 999999999999999 788777765 38999999999875
No 167
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=98.84 E-value=2.2e-09 Score=99.80 Aligned_cols=70 Identities=23% Similarity=0.302 Sum_probs=61.1
Q ss_pred ccceEEEecCCCCcccccCceeeecccCCCCCCC-cEEEEECCEEcCCHHHHHHHHhcCCCCCEEEEEEEECCeEEEEEE
Q 013014 349 VSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILG-DIITSVNGKKVSNGSDLYRILDQCKVGDELLLQGIKQPPVLSDNL 427 (451)
Q Consensus 349 ~~Gv~V~~v~~~s~a~~aGl~~~~~~~~~~L~~G-DiIl~vnG~~i~~~~dl~~~l~~~~~g~~v~l~v~R~g~~~~~~v 427 (451)
..|++|.+|.++|||++|||++ | |+|++|||++|.++.++...+....+|++++++|+|+++..+.++
T Consensus 15 ~~G~~V~~V~~~SpA~~AGL~~-----------G~D~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~~~~~~~v 83 (209)
T 3rle_A 15 TEGYHVLRVQENSPGHRAGLEP-----------FFDFIVSINGSRLNKDNDTLKDLLKANVEKPVKMLIYSSKTLELRET 83 (209)
T ss_dssp SEEEEEEEECTTSHHHHTTCCT-----------TTEEEEEETTEECCSSSSHHHHHHHHTTTSCEEEEEEETTTCCEEEE
T ss_pred CCEEEEEEECCCCHHHHCCCCc-----------CCeEEEEECCEECcCHHHHHHHHHhcCCCCEEEEEEEecCCceEEEE
Confidence 3799999999999999999999 9 999999999999999888777666789999999999875555555
Q ss_pred Ee
Q 013014 428 RL 429 (451)
Q Consensus 428 ~l 429 (451)
++
T Consensus 84 ~l 85 (209)
T 3rle_A 84 SV 85 (209)
T ss_dssp EE
T ss_pred EE
Confidence 55
No 168
>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens}
Probab=98.84 E-value=5.7e-09 Score=83.00 Aligned_cols=71 Identities=28% Similarity=0.368 Sum_probs=56.8
Q ss_pred cccceeccchhhhhhCccceEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEcCCH--HHHHHHHhcCCCCC
Q 013014 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVGD 410 (451)
Q Consensus 333 ~lGi~~~~~~~~~~~~~~Gv~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i~~~--~dl~~~l~~~~~g~ 410 (451)
.+|+.+.... +-.|++|..+ +++||+ +||++ ||+|++|||++|.++ .++.+.+...++|+
T Consensus 15 g~G~~~~~~~-----~~~~~~v~~v-~~spA~-aGl~~-----------GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~ 76 (88)
T 3bpu_A 15 GFGFTIADSP-----GGGGQRVKQI-VDSPRS-RGLKE-----------GDLIVEVNKKNVQALTHNQVVDMLVESPKGS 76 (88)
T ss_dssp BSSCEEEECT-----TSSSEEEEEC-CC--CC-TTCCT-----------TCEEEEETTEECTTSCHHHHHHHHHTSCTTC
T ss_pred ceeEEEEecC-----CCCcEEEEEe-cCChhH-hCCCC-----------CCEEEEECCEEcCCCCHHHHHHHHHhCCCCC
Confidence 4677665321 1258888887 999999 99999 999999999999998 88888887666799
Q ss_pred EEEEEEEECCe
Q 013014 411 ELLLQGIKQPP 421 (451)
Q Consensus 411 ~v~l~v~R~g~ 421 (451)
++.++|.|+|+
T Consensus 77 ~v~l~v~R~g~ 87 (88)
T 3bpu_A 77 EVTLLVQRQTR 87 (88)
T ss_dssp EEEEEEEEECC
T ss_pred EEEEEEEeCCc
Confidence 99999999875
No 169
>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens}
Probab=98.84 E-value=1.3e-09 Score=88.69 Aligned_cols=73 Identities=22% Similarity=0.310 Sum_probs=61.4
Q ss_pred cccceeccchhhhhhCccceEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEcCC--HHHHHHHHhcCCCCC
Q 013014 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGD 410 (451)
Q Consensus 333 ~lGi~~~~~~~~~~~~~~Gv~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i~~--~~dl~~~l~~~~~g~ 410 (451)
.+|+.+.... +..|++|.+|.++|||+++||++ ||+|++|||++|.+ +.++.+++... .|+
T Consensus 21 g~G~~~~~~~-----~~~g~~V~~V~~~spA~~aGl~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~~-~~~ 83 (98)
T 2jxo_A 21 GYGFNLHSDK-----SKPGQFIRSVDPDSPAEASGLRA-----------QDRIVEVNGVCMEGKQHGDVVSAIRAG-GDE 83 (98)
T ss_dssp CCCEEEECCC-----SSSCEEEEEECTTSHHHHHTCCT-----------TCEEEEETTEECTTCCHHHHHHHHHTT-TTE
T ss_pred cccEEEEecC-----CCCCEEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhC-CCc
Confidence 4666664321 12589999999999999999999 99999999999999 99999999875 788
Q ss_pred EEEEEEEECCeE
Q 013014 411 ELLLQGIKQPPV 422 (451)
Q Consensus 411 ~v~l~v~R~g~~ 422 (451)
.+.++|.|+|+.
T Consensus 84 ~~~l~v~R~g~~ 95 (98)
T 2jxo_A 84 TKLLVVDRETDE 95 (98)
T ss_dssp EEEEECCHHHHH
T ss_pred EEEEEEECCchh
Confidence 888999998753
No 170
>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A
Probab=98.84 E-value=4.1e-09 Score=83.16 Aligned_cols=72 Identities=14% Similarity=0.212 Sum_probs=56.8
Q ss_pred cccceeccchhhhhhCccceEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEcCCH--HHHHHHHhcCCCCC
Q 013014 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVGD 410 (451)
Q Consensus 333 ~lGi~~~~~~~~~~~~~~Gv~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i~~~--~dl~~~l~~~~~g~ 410 (451)
.+|+.+...... ..|++|.+|.++|||+++||++ ||+|++|||+++.++ .++...+.. .++
T Consensus 12 ~~G~~l~gg~~~----~~~v~V~~V~~~spA~~aGl~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~--~~~ 74 (85)
T 1rgw_A 12 PWGFRLQGGKDF----NMPLTISRITPGSKAAQSQLSQ-----------GDLVVAIDGVNTDTMTHLEAQNKIKS--ASY 74 (85)
T ss_dssp CCCEEECCCGGG----TSCCBEEEECTTSHHHHSSCCC-----------CSBEEEETTEECTTCCHHHHHHHHTT--CSS
T ss_pred ccCEEEEeccCC----CCCeEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCcCHHHHHHHHHc--CCC
Confidence 456666532111 1589999999999999999999 999999999999998 677766653 467
Q ss_pred EEEEEEEECCe
Q 013014 411 ELLLQGIKQPP 421 (451)
Q Consensus 411 ~v~l~v~R~g~ 421 (451)
++.++|.|+|+
T Consensus 75 ~v~l~v~R~~~ 85 (85)
T 1rgw_A 75 NLSLTLQKSKR 85 (85)
T ss_dssp CEEEEEESCCC
T ss_pred eEEEEEEeCCC
Confidence 79999999874
No 171
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=98.83 E-value=3.7e-09 Score=84.47 Aligned_cols=59 Identities=24% Similarity=0.376 Sum_probs=54.5
Q ss_pred cceEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEcCCH--HHHHHHHhcCCCCCEEEEEEEECCe
Q 013014 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVGDELLLQGIKQPP 421 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i~~~--~dl~~~l~~~~~g~~v~l~v~R~g~ 421 (451)
.|++|.+|.+++||+++||++ ||+|++|||++|.++ .++.+++... |+++.++|.|.+.
T Consensus 28 ~gv~V~~V~~~spA~~aGl~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~~--~~~v~l~v~r~~~ 88 (90)
T 2he4_A 28 PGQYIRSVDPGSPAARSGLRA-----------QDRLIEVNGQNVEGLRHAEVVASIKAR--EDEARLLVVGPST 88 (90)
T ss_dssp SSEEEEEECTTSHHHHHTCCT-----------TCEEEEETTEECTTSCHHHHHHHHTTS--SSEEEEEEECCCC
T ss_pred CCEEEEEECCCChHHHCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHcC--CCcEEEEEEccCC
Confidence 589999999999999999999 999999999999999 8999988763 8999999999765
No 172
>2kom_A Partitioning defective 3 homolog; PAR-3B, PDZ domain, PSI, structural genomics, alternative splicing, cell cycle, cell division, cell junction; NMR {Homo sapiens}
Probab=98.83 E-value=6.1e-09 Score=88.26 Aligned_cols=62 Identities=24% Similarity=0.363 Sum_probs=56.1
Q ss_pred ccceEEEecCCCCcccccC-ceeeecccCCCCCCCcEEEEECCEEcCC--HHHHHHHHhcCCCCCEEEEEEEECCe
Q 013014 349 VSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDELLLQGIKQPP 421 (451)
Q Consensus 349 ~~Gv~V~~v~~~s~a~~aG-l~~~~~~~~~~L~~GDiIl~vnG~~i~~--~~dl~~~l~~~~~g~~v~l~v~R~g~ 421 (451)
..|++|.+|.+++||+++| |++ ||+|++|||++|.+ +.++.+++...++|++++++|.|+|+
T Consensus 57 ~~gv~V~~V~~gspA~~aG~L~~-----------GD~Il~Ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~g~ 121 (121)
T 2kom_A 57 SAPIYVKNILPRGAAIQDGRLKA-----------GDRLIEVNGVDLVGKSQEEVVSLLRSTKMEGTVSLLVFRQED 121 (121)
T ss_dssp SCCEEEEEECTTSHHHHHTCCCS-----------SSEEEEETTEECTTSCHHHHHHHHHHCCSSCEEEEEEEECCC
T ss_pred CCCEEEEEECCCChHHHcCCCCC-----------CCEEEEECCEEcCCCCHHHHHHHHhcCCCCCEEEEEEEeCCC
Confidence 3689999999999999999 999 99999999999998 58888888876678999999999874
No 173
>1b8q_A Protein (neuronal nitric oxide synthase); PDZ domain, NNOS, nitric oxide synthase, oxidoreductase; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=98.83 E-value=2e-09 Score=91.90 Aligned_cols=84 Identities=20% Similarity=0.307 Sum_probs=70.7
Q ss_pred ccccceeccchhhhhhCccceEEEecCCCCcccccCc-eeeecccCCCCCCCcEEEEECCEEcCC--HHHHHHHHhcCCC
Q 013014 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGL-LSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKV 408 (451)
Q Consensus 332 ~~lGi~~~~~~~~~~~~~~Gv~V~~v~~~s~a~~aGl-~~~~~~~~~~L~~GDiIl~vnG~~i~~--~~dl~~~l~~~~~ 408 (451)
..+|+.+.... +..|++|.+|.+++||+++|| ++ ||+|++|||++|.+ +.++.+++.. ..
T Consensus 20 ~glG~~~~~~~-----~~~~~~V~~V~~~spA~~aGll~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~-~~ 82 (127)
T 1b8q_A 20 GGLGFLVKERV-----SKPPVIISDLIRGGAAEQSGLIQA-----------GDIILAVNDRPLVDLSYDSALEVLRG-IA 82 (127)
T ss_dssp SCCSCCEEECT-----TSSCEEECCCSSSSSHHHHSSCCT-----------TTCCCEETTEECSSSCHHHHHHHHHS-CC
T ss_pred CcEeEEEEecC-----CCCCEEEEEeCCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHh-CC
Confidence 45677765432 125899999999999999998 99 99999999999999 9999999987 47
Q ss_pred CCEEEEEEEECCeEEEEEEEeeec
Q 013014 409 GDELLLQGIKQPPVLSDNLRLLWS 432 (451)
Q Consensus 409 g~~v~l~v~R~g~~~~~~v~l~~~ 432 (451)
|+.+.++|.|+|+..++++++...
T Consensus 83 g~~v~l~v~R~g~~~~~~~~~~~~ 106 (127)
T 1b8q_A 83 SETHVVLILRGPEGFTTHLETTFT 106 (127)
T ss_dssp SSCEEEEEECCCCSEEECCCCCCC
T ss_pred CCeEEEEEEeCCceEEEEEEEEec
Confidence 899999999999998888876433
No 174
>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A
Probab=98.82 E-value=6.8e-09 Score=86.33 Aligned_cols=62 Identities=24% Similarity=0.381 Sum_probs=56.2
Q ss_pred cceEEEecCCCCcccccC-ceeeecccCCCCCCCcEEEEECCEEcCC--HHHHHHHHhcCCCCCEEEEEEEECCeE
Q 013014 350 SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDELLLQGIKQPPV 422 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aG-l~~~~~~~~~~L~~GDiIl~vnG~~i~~--~~dl~~~l~~~~~g~~v~l~v~R~g~~ 422 (451)
.|++|.+|.+++||+++| |++ ||+|++|||++|.+ +.++.+++...++|+.+.++|.|+|+.
T Consensus 39 ~g~~V~~V~~~spA~~aG~l~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~~~ 103 (111)
T 2koj_A 39 APIYVKNILPRGAAIQDGRLKA-----------GDRLIEVNGVDLAGKSQEEVVSLLRSTKMEGTVSLLVFRQEEA 103 (111)
T ss_dssp SCEEEEEECSSSHHHHHCSSCT-----------TCEEEEETTEECTTSCHHHHHHHHHHCCCSSEEEEEEEECCCC
T ss_pred cCEEEEEECCCChHHHCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEeCCCC
Confidence 689999999999999999 999 99999999999966 588988888766799999999999864
No 175
>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A
Probab=98.82 E-value=4.5e-09 Score=85.57 Aligned_cols=60 Identities=30% Similarity=0.422 Sum_probs=54.7
Q ss_pred cceEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEcC--CHHHHHHHHhcCCCCCEEEEEEEECCeE
Q 013014 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCKVGDELLLQGIKQPPV 422 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i~--~~~dl~~~l~~~~~g~~v~l~v~R~g~~ 422 (451)
.|++|.+|.++|||+++||++ ||+|++|||+++. ++.++..++. ++|+.+.+++.|+|+.
T Consensus 34 ~g~~V~~V~~~spA~~aGl~~-----------GD~I~~ing~~v~~~~~~~~~~~l~--~~g~~v~l~v~r~~~~ 95 (99)
T 3khf_A 34 VHHVVWSVEDGSPAQEAGLRA-----------GDLITHINGESVLGLVHMDVVELLL--KSGNKISLRTTALENT 95 (99)
T ss_dssp EEEEEEEECTTSHHHHHTCCT-----------TCEEEEETTEECTTCCHHHHHHHHH--HSCSEEEEEEECSCSS
T ss_pred CCeEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHh--cCCCEEEEEEEECCCc
Confidence 478999999999999999999 9999999999999 8889998887 4699999999998764
No 176
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=98.82 E-value=5.1e-09 Score=83.50 Aligned_cols=60 Identities=20% Similarity=0.318 Sum_probs=52.7
Q ss_pred cceEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEcCC--HHHHHHHHhcCCCCCEEEEEEEECCeE
Q 013014 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDELLLQGIKQPPV 422 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i~~--~~dl~~~l~~~~~g~~v~l~v~R~g~~ 422 (451)
.|++|.+|.+++||+++||++ ||+|++|||+++.+ +.++...+.. .|+++.++|.|+++.
T Consensus 27 ~~v~V~~V~~~spA~~aGl~~-----------GD~I~~ing~~v~~~~~~~~~~~~~~--~g~~v~l~v~R~~~~ 88 (89)
T 2q3g_A 27 VPLSISRLTPGGKAAQAGVAV-----------GDWVLSIDGENAGSLTHIEAQNKIRA--CGERLSLGLSRAITS 88 (89)
T ss_dssp EEEEEEEECTTSHHHHTTCCT-----------TCEEEEETTEEGGGCCHHHHHHHHHT--CTTEEEEEEEEECCC
T ss_pred CCEEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHh--CCCEEEEEEEeCCCC
Confidence 589999999999999999999 99999999999995 5777777764 488999999998763
No 177
>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}
Probab=98.81 E-value=7.3e-09 Score=81.79 Aligned_cols=58 Identities=24% Similarity=0.364 Sum_probs=52.6
Q ss_pred cceEEEecCCCCcccccC-ceeeecccCCCCCCCcEEEEECCEEcC--CHHHHHHHHhcCCCCCEEEEEEEE
Q 013014 350 SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCKVGDELLLQGIK 418 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aG-l~~~~~~~~~~L~~GDiIl~vnG~~i~--~~~dl~~~l~~~~~g~~v~l~v~R 418 (451)
.|++|.+|.+++||+++| |++ ||+|++|||+++. ++.++.+++...++|++++++|.|
T Consensus 25 ~~~~V~~v~~~spA~~aG~l~~-----------GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R 85 (85)
T 2i04_A 25 EFLQIKSLVLDGPAALDGKMET-----------GDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASVDLELCR 85 (85)
T ss_dssp BCEEEEEECTTSHHHHHCCCCT-----------TCEEEEETTEECTTCCHHHHHHHHHTSCTTCEEEEEEEC
T ss_pred CCEEEEEECCCChHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEC
Confidence 579999999999999999 999 9999999999999 468999888877679999999876
No 178
>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- interaction, structural genomics consortium, synaptosome, T junction; 1.80A {Homo sapiens}
Probab=98.81 E-value=5e-09 Score=89.10 Aligned_cols=78 Identities=21% Similarity=0.368 Sum_probs=61.9
Q ss_pred cccccceeccch--hhhhhC---ccceEEEecCCCCcccccC-ceeeecccCCCCCCCcEEEEECCEEcCC--HHHHHHH
Q 013014 331 RPILGIKFAPDQ--SVEQLG---VSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRI 402 (451)
Q Consensus 331 ~~~lGi~~~~~~--~~~~~~---~~Gv~V~~v~~~s~a~~aG-l~~~~~~~~~~L~~GDiIl~vnG~~i~~--~~dl~~~ 402 (451)
++++|+.+.... .++..+ ..|++|.+|.++|||+++| |++ ||+|++|||++|.+ +.++.++
T Consensus 35 ~~~lGi~v~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~-----------GD~Il~Vng~~v~~~~~~~~~~~ 103 (123)
T 2iwq_A 35 SKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKP-----------GDRIVEVDGMDLRDASHEQAVEA 103 (123)
T ss_dssp TSCCSEEEEECC---------CCCCSEEEEEECSSSHHHHHCCCCT-----------TCEEEEETTEECTTCCHHHHHHH
T ss_pred CCCccEEEEeccCccccccccCCCCCEEEEEECCCChHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHH
Confidence 578999886421 122112 2699999999999999999 999 99999999999998 8999999
Q ss_pred HhcCCCCCEEEEEEEECCe
Q 013014 403 LDQCKVGDELLLQGIKQPP 421 (451)
Q Consensus 403 l~~~~~g~~v~l~v~R~g~ 421 (451)
+... ++.++++|.|..+
T Consensus 104 l~~~--~~~v~l~v~r~~~ 120 (123)
T 2iwq_A 104 IRKA--GNPVVFMVQSIIS 120 (123)
T ss_dssp HHHC--CSSEEEEEECCCC
T ss_pred HHcC--CCeEEEEEEECCc
Confidence 9764 5689999998764
No 179
>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.81 E-value=1e-09 Score=93.84 Aligned_cols=69 Identities=22% Similarity=0.223 Sum_probs=58.6
Q ss_pred cceEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEcCCHHHHHHHHhcCCCCCEEEEEEEECCeEEEEEEEe
Q 013014 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDELLLQGIKQPPVLSDNLRL 429 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i~~~~dl~~~l~~~~~g~~v~l~v~R~g~~~~~~v~l 429 (451)
.|++|.+|.+++||+++||++ ||+|++|||++|.++.+ .+++...+.++.+.++|.|+|+..++++++
T Consensus 46 ~gv~V~~V~~~spA~~aGL~~-----------GD~I~~vng~~v~~~~~-~~~~~~~~~~~~v~l~v~R~g~~~~~~v~~ 113 (128)
T 1uf1_A 46 LGIYITGVDPGSEAEGSGLKV-----------GDQILEVNGRSFLNILH-DEAVRLLKSSRHLILTVKDVGRLPHARTTV 113 (128)
T ss_dssp CCCEEEEECTTCHHHHHTCCT-----------TCEEEEETTEECSSCCH-HHHHHHHTTCSEEEEEEECCSCCSSCSCCC
T ss_pred CCEEEEEECCCCHHHHCCCCC-----------CCEEEEECCEECCCCCH-HHHHHHHhcCCeEEEEEEECCccccccccc
Confidence 489999999999999999999 99999999999999755 444444445789999999999988777765
Q ss_pred e
Q 013014 430 L 430 (451)
Q Consensus 430 ~ 430 (451)
.
T Consensus 114 ~ 114 (128)
T 1uf1_A 114 D 114 (128)
T ss_dssp C
T ss_pred c
Confidence 4
No 180
>1wif_A RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, structural genomics, mouse cDNA, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.80 E-value=5e-09 Score=89.48 Aligned_cols=59 Identities=20% Similarity=0.356 Sum_probs=55.1
Q ss_pred cceEEEecCCCCcccccC-ceeeecccCCCCCCCcEEEEECCEEcC--CHHHHHHHHhcCCCCCEEEEEEEEC
Q 013014 350 SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCKVGDELLLQGIKQ 419 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aG-l~~~~~~~~~~L~~GDiIl~vnG~~i~--~~~dl~~~l~~~~~g~~v~l~v~R~ 419 (451)
.+++|.+|.+++||+++| |++ ||+|++|||++|. ++.|+.++|...++|++++|+|.|+
T Consensus 49 ~~v~V~~V~~gspA~~aG~L~~-----------GD~Il~VnG~~v~~~s~~d~~~~l~~~~~G~~v~l~V~R~ 110 (126)
T 1wif_A 49 PYLQISHLINKGAAASDGILQP-----------GDVLISVGHANVLGYTLREFLKLLQNITIGTVLQIKAYRG 110 (126)
T ss_dssp TEEEECCCCTTSSGGGCSSSCT-----------TCBEEEESSSCCTTCCHHHHHHHHTSCCSSCEEEEEEESS
T ss_pred CcEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEEcCCCCHHHHHHHHhcCCCCCEEEEEEEEC
Confidence 468899999999999999 999 9999999999995 8999999998877899999999998
No 181
>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=98.80 E-value=8.2e-09 Score=83.73 Aligned_cols=73 Identities=22% Similarity=0.344 Sum_probs=59.5
Q ss_pred cccceeccchhhhhhCccceEEEecCCCCcccccC-ceeeecccCCCCCCCcEEEEECCEEcCC--HHHHHHHHhcCCCC
Q 013014 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVG 409 (451)
Q Consensus 333 ~lGi~~~~~~~~~~~~~~Gv~V~~v~~~s~a~~aG-l~~~~~~~~~~L~~GDiIl~vnG~~i~~--~~dl~~~l~~~~~g 409 (451)
.+|+.+..... ...|++|.+|.+++||+++| |++ ||+|++|||++|.+ +.++..++. ..|
T Consensus 17 ~lG~~i~~~~~----~~~~~~V~~V~~~spA~~aG~l~~-----------GD~I~~vng~~v~~~~~~~~~~~l~--~~g 79 (97)
T 1n7e_A 17 PLGITISGTEE----PFDPIIISSLTKGGLAERTGAIHI-----------GDRILAINSSSLKGKPLSEAIHLLQ--MAG 79 (97)
T ss_dssp CCCEEEECCSS----TTSCCEEEEECTTSHHHHHTCCCT-----------TCEEEEETTEECTTCCHHHHHHHHH--TCC
T ss_pred CcCEEEEcccC----CCCCEEEEEECCCCHHHHCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHH--cCC
Confidence 36666654211 12689999999999999999 999 99999999999975 678888886 478
Q ss_pred CEEEEEEEECCeE
Q 013014 410 DELLLQGIKQPPV 422 (451)
Q Consensus 410 ~~v~l~v~R~g~~ 422 (451)
+.+.++|.|+|+.
T Consensus 80 ~~v~l~v~R~~~~ 92 (97)
T 1n7e_A 80 ETVTLKIKKQTDA 92 (97)
T ss_dssp SEEEEEEECCCCC
T ss_pred CeEEEEEEeCCCC
Confidence 9999999998864
No 182
>2o2t_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens}
Probab=98.80 E-value=1.7e-09 Score=91.01 Aligned_cols=62 Identities=21% Similarity=0.271 Sum_probs=56.6
Q ss_pred cceEEEecCCCCcccccC-ceeeecccCCCCCCCcEEEEECCEEcC---CHHHHHHHHhcCCCCCEEEEEEEECCeEEE
Q 013014 350 SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVS---NGSDLYRILDQCKVGDELLLQGIKQPPVLS 424 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aG-l~~~~~~~~~~L~~GDiIl~vnG~~i~---~~~dl~~~l~~~~~g~~v~l~v~R~g~~~~ 424 (451)
.|++|.+|.+++||+++| |++ ||+|++|||++|. ++.++..++.. .|+++.++|.|+++..+
T Consensus 49 ~gv~V~~V~~~spA~~aG~l~~-----------GD~Il~ing~~v~~~~~~~~~~~~l~~--~~~~v~l~v~R~~~~~~ 114 (117)
T 2o2t_A 49 LGIFVQEIQEGSVAHRDGRLKE-----------TDQILAINGQALDQTITHQQAISILQK--AKDTVQLVIARGSLPQY 114 (117)
T ss_dssp EEEEECCCCTTSHHHHHCCCCT-----------TCEEEEETTEECCTTSCHHHHHHHHHH--CCSEEEEEEESSCCGGG
T ss_pred CCEEEEEECCCCHHHHCCCCCC-----------CCEEEEECCEECCCCCCHHHHHHHHHc--CCCEEEEEEEeCCccee
Confidence 689999999999999999 999 9999999999999 88999988876 58999999999987543
No 183
>1ueq_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.79 E-value=1.1e-08 Score=86.91 Aligned_cols=61 Identities=25% Similarity=0.419 Sum_probs=56.1
Q ss_pred cceEEEecCCCCcccccC-ceeeecccCCCCCCCcEEEEECCEEcC--CHHHHHHHHhcCCCCCEEEEEEEECCe
Q 013014 350 SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCKVGDELLLQGIKQPP 421 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aG-l~~~~~~~~~~L~~GDiIl~vnG~~i~--~~~dl~~~l~~~~~g~~v~l~v~R~g~ 421 (451)
.|++|.+|.+++||+++| |++ ||+|++|||++|. ++.++.++|...+.|++++|+|.|++.
T Consensus 44 ~gv~V~~V~~~spA~~aG~L~~-----------GD~Il~Vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~~ 107 (123)
T 1ueq_A 44 EFLQVKSVIPDGPAAQDGKMET-----------GDVIVYINEVCVLGHTHADVVKLFQSVPIGQSVNLVLCRGYP 107 (123)
T ss_dssp CCCEEEEECTTSHHHHTSCCCT-----------TCEEEEETTEECTTSCHHHHHHHHHTSCTTCEEEEEEEESCC
T ss_pred CCEEEEEECCCCHHHHCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEeCCC
Confidence 579999999999999999 999 9999999999998 678999999887679999999999874
No 184
>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}
Probab=98.79 E-value=7.7e-09 Score=84.65 Aligned_cols=75 Identities=17% Similarity=0.197 Sum_probs=61.1
Q ss_pred ccccceeccchhhhhhCccceEEEecCCCCcccc-cCceeeecccCCCCCCCcEEEEECCEEc--CCHHHHHHHHhcCCC
Q 013014 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGK-AGLLSTKRDAYGRLILGDIITSVNGKKV--SNGSDLYRILDQCKV 408 (451)
Q Consensus 332 ~~lGi~~~~~~~~~~~~~~Gv~V~~v~~~s~a~~-aGl~~~~~~~~~~L~~GDiIl~vnG~~i--~~~~dl~~~l~~~~~ 408 (451)
.+||+.+...... -...+++|.+|.+++||++ +||++ ||+|++|||++| .+++|+.++|...+.
T Consensus 21 ~~lG~~i~~~~~~--~~~~~~~V~~V~~~spA~~~ggl~~-----------GD~I~~Ing~~v~~~~~~~~~~~l~~~~~ 87 (101)
T 2yt7_A 21 EGLGVALVESGWG--SLLPTAVIANLLHGGPAERSGALSI-----------GDRLTAINGTSLVGLPLAACQAAVRETKS 87 (101)
T ss_dssp CCCCEEEEECCCS--SSSCCEEEEEECTTSTTGGGSSCCT-----------TCEEEEESSCBCTTSCHHHHHHHHHHTTT
T ss_pred CccCEEEEeCCCC--CCccCEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 4677777531110 0234799999999999999 67999 999999999999 899999999988668
Q ss_pred CCEEEEEEEEC
Q 013014 409 GDELLLQGIKQ 419 (451)
Q Consensus 409 g~~v~l~v~R~ 419 (451)
|+.++|+|.|.
T Consensus 88 g~~v~l~v~R~ 98 (101)
T 2yt7_A 88 QTSVTLSIVHC 98 (101)
T ss_dssp SSEEEEEECCC
T ss_pred CCeEEEEEEeC
Confidence 99999999884
No 185
>1wf7_A Enigma homologue protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.79 E-value=1.8e-09 Score=88.74 Aligned_cols=67 Identities=12% Similarity=0.124 Sum_probs=57.7
Q ss_pred cceEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEcCCH--HHHHHHHhcCCCCCEEEEEEEECCeEEEEEE
Q 013014 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVGDELLLQGIKQPPVLSDNL 427 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i~~~--~dl~~~l~~~~~g~~v~l~v~R~g~~~~~~v 427 (451)
.+++|.+|.+++||+++||++ ||+|++|||++|.++ .++...+.. .|+++.++|.|+++..++++
T Consensus 29 ~~v~V~~V~~~spA~~aGL~~-----------GD~I~~ing~~v~~~~~~~~~~~~~~--~g~~v~l~v~R~g~~~~~~v 95 (103)
T 1wf7_A 29 MPLTISSLKDGGKASQAHVRI-----------GDVVLSIDGISAQGMTHLEAQNKIKA--CTGSLNMTLQRASAAAKSEP 95 (103)
T ss_dssp EEEEECCCCTTCHHHHTTCCT-----------TCBEEEETTEECSSCCHHHHHHHHHH--CSSEEEEEECCCSCCCCCCC
T ss_pred CCEEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEeCCCcCCCCC
Confidence 468999999999999999999 999999999999997 566666654 48899999999998877766
Q ss_pred Ee
Q 013014 428 RL 429 (451)
Q Consensus 428 ~l 429 (451)
++
T Consensus 96 ~p 97 (103)
T 1wf7_A 96 VS 97 (103)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 186
>2h2b_A Tight junction protein ZO-1; PDZ domain, phage derived high affinity ligand, cell adhesio; 1.60A {Homo sapiens} PDB: 2h2c_A 2h3m_A 2rrm_A
Probab=98.78 E-value=7.3e-09 Score=85.54 Aligned_cols=62 Identities=19% Similarity=0.257 Sum_probs=55.1
Q ss_pred cceEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEcCCHHHHHHHHhcCCCCCEEEEEEEECCeEE
Q 013014 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDELLLQGIKQPPVL 423 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i~~~~dl~~~l~~~~~g~~v~l~v~R~g~~~ 423 (451)
.|++|.+|.+++||+ +||++ ||+|++|||++|.++.++...+...+.|++++++|.|+|+..
T Consensus 39 ~gv~V~~V~~~spA~-agl~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~~~~ 100 (107)
T 2h2b_A 39 TSIVISDVLKGGPAE-GQLQE-----------NDRVAMVNGVSMDNVEHAFAVQQLRKSGKNAKITIRRKKGGG 100 (107)
T ss_dssp CCEEEEEECTTSTTB-TTBCT-----------TCEEEEETTEECTTCCHHHHHHHHHTCCSEEEEEEEEESCCC
T ss_pred CCEEEEEECCCCchh-hCCCC-----------CCEEEEECCEECCCccHHHHHHHhhCCCCEEEEEEEECCCCC
Confidence 699999999999999 99999 999999999999999887776655567999999999988643
No 187
>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A
Probab=98.77 E-value=5.9e-09 Score=85.91 Aligned_cols=67 Identities=21% Similarity=0.255 Sum_probs=52.2
Q ss_pred cceEEEecCCCCcccccC-ceeeecccCCCCCCCcEEEEECCEEcCC--HHHHHHHHhcCCCCCEEEEEEEECCeEEEEE
Q 013014 350 SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDELLLQGIKQPPVLSDN 426 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aG-l~~~~~~~~~~L~~GDiIl~vnG~~i~~--~~dl~~~l~~~~~g~~v~l~v~R~g~~~~~~ 426 (451)
.|++|.+|.++|||+++| |++ ||+|++|||+++.+ +.++...+.. .|+.+.++|.|+++.....
T Consensus 33 ~gv~V~~V~~~spA~~aG~L~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~--~~~~v~l~v~R~~~~~~~~ 99 (105)
T 2awx_A 33 NSIYVTKIIEGGAAHKDGKLQI-----------GDKLLAVNSVSLEEVTHEEAVTALKN--TSDFVYLKVAKPTSMYISR 99 (105)
T ss_dssp CCEEEEEECTTSHHHHHCCCCT-----------TCEEEEETTEECTTCBHHHHHHHHHS--CCSEEEEEEECCCC-----
T ss_pred CCEEEEEECCCCHHHHCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEcCCCCCCcc
Confidence 689999999999999999 999 99999999999976 5566666654 4899999999999888877
Q ss_pred EEe
Q 013014 427 LRL 429 (451)
Q Consensus 427 v~l 429 (451)
+..
T Consensus 100 ~~p 102 (105)
T 2awx_A 100 HHH 102 (105)
T ss_dssp ---
T ss_pred ccc
Confidence 664
No 188
>1wi2_A Riken cDNA 2700099C19; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.77 E-value=7.2e-09 Score=85.26 Aligned_cols=72 Identities=22% Similarity=0.323 Sum_probs=60.7
Q ss_pred ccccceeccchhhhhhCccceEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEcCC--HHHHHHHHhcCCCC
Q 013014 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVG 409 (451)
Q Consensus 332 ~~lGi~~~~~~~~~~~~~~Gv~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i~~--~~dl~~~l~~~~~g 409 (451)
.++|+.+..... ...|++|.+|.+++||+++||++ ||+|++|||++|.+ +.++.+++.. |
T Consensus 27 ~~lG~~~~~~~~----~~~g~~V~~V~~~spA~~aGL~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~---~ 88 (104)
T 1wi2_A 27 AQLGFNIRGGKA----SQLGIFISKVIPDSDAHRAGLQE-----------GDQVLAVNDVDFQDIEHSKAVEILKT---A 88 (104)
T ss_dssp CCCSEEEECCSS----SCCCCEEEEECTTSHHHHHTCCT-----------TCEEEEETTEECSSCCHHHHHHHHHH---S
T ss_pred CCccEEEEcccC----CCCCEEEEEeCCCChHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHhC---C
Confidence 577887765221 12689999999999999999999 99999999999999 8999988876 7
Q ss_pred CEEEEEEEECCe
Q 013014 410 DELLLQGIKQPP 421 (451)
Q Consensus 410 ~~v~l~v~R~g~ 421 (451)
+++.++|.|+..
T Consensus 89 ~~v~l~v~r~~~ 100 (104)
T 1wi2_A 89 REISMRVRFFSG 100 (104)
T ss_dssp SSEEEEEECCCC
T ss_pred CEEEEEEEECCC
Confidence 889999998764
No 189
>2iwn_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.35A {Homo sapiens}
Probab=98.77 E-value=8.5e-09 Score=83.26 Aligned_cols=77 Identities=23% Similarity=0.344 Sum_probs=59.1
Q ss_pred ccccceeccchhhhhhCccceEEEecCCCCcccccC-ceeeecccCCCCCCCcEEEEECCEEcCCH--HHHHHHHhcCCC
Q 013014 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKV 408 (451)
Q Consensus 332 ~~lGi~~~~~~~~~~~~~~Gv~V~~v~~~s~a~~aG-l~~~~~~~~~~L~~GDiIl~vnG~~i~~~--~dl~~~l~~~~~ 408 (451)
..+|+.+........-...|++|.+|.+++||+++| |++ ||+|++|||+++.++ .++...+.. .
T Consensus 15 ~~lG~~i~~~~~~~~~~~~~~~V~~v~~~s~A~~aG~l~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~--~ 81 (97)
T 2iwn_A 15 QGLGITIAGYIGDKKLEPSGIFVKSITKSSAVEHDGRIQI-----------GDQIIAVDGTNLQGFTNQQAVEVLRH--T 81 (97)
T ss_dssp TBSCEEEECCCCC----CCCCEEEEECTTCHHHHHCCCCT-----------TCEEEEETTEECTTSCHHHHHHHHHT--C
T ss_pred CCCcEEEEccCCCCCCCCCCEEEEEeCCCChHHhCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--C
Confidence 457777765321111123689999999999999999 999 999999999999975 566666654 7
Q ss_pred CCEEEEEEEECCe
Q 013014 409 GDELLLQGIKQPP 421 (451)
Q Consensus 409 g~~v~l~v~R~g~ 421 (451)
|+++.++|.|+|+
T Consensus 82 ~~~v~l~v~r~g~ 94 (97)
T 2iwn_A 82 GQTVLLTLMRRGE 94 (97)
T ss_dssp CSEEEEEEEEEEE
T ss_pred CCeEEEEEEeCCC
Confidence 8999999999875
No 190
>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.77 E-value=4.8e-09 Score=86.17 Aligned_cols=74 Identities=16% Similarity=0.218 Sum_probs=60.0
Q ss_pred cccceeccchhhhhhCccceEEEecCCCCcccccC-ceeeecccCCCCCCCcEEEEECCEEcCC--HHHHHHHHhcCCCC
Q 013014 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVG 409 (451)
Q Consensus 333 ~lGi~~~~~~~~~~~~~~Gv~V~~v~~~s~a~~aG-l~~~~~~~~~~L~~GDiIl~vnG~~i~~--~~dl~~~l~~~~~g 409 (451)
.+|+.+..... ...|++|.+|.+++||+++| |++ ||+|++|||++|.+ +.++.+++....+|
T Consensus 21 g~G~~i~~g~~----~~~~~~V~~V~~~spA~~aG~L~~-----------GD~Il~ing~~v~~~~~~~~~~~l~~~~~g 85 (103)
T 1uep_A 21 GFGFRILGGDE----PGQPILIGAVIAMGSADRDGRLHP-----------GDELVYVDGIPVAGKTHRYVIDLMHHAARN 85 (103)
T ss_dssp SCCEEECCCCS----TTSCCBEEEECTTSTTGGGTCCCT-----------TCEEEEETTEECTTSCHHHHHHHHHHHHHH
T ss_pred ccCEEEeeecC----CCCCeEEEEeCCCChHHhCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhCCCC
Confidence 46776653110 02689999999999999999 999 99999999999965 78888888765448
Q ss_pred CEEEEEEEECCe
Q 013014 410 DELLLQGIKQPP 421 (451)
Q Consensus 410 ~~v~l~v~R~g~ 421 (451)
++|+|+|.|+++
T Consensus 86 ~~v~l~v~R~~~ 97 (103)
T 1uep_A 86 GQVNLTVRRKVL 97 (103)
T ss_dssp TEEEEEEEEECC
T ss_pred CcEEEEEEeCCC
Confidence 999999999875
No 191
>4amh_A Disks large homolog 1; permutation, protein folding, structural protein; 2.30A {Homo sapiens}
Probab=98.77 E-value=1.5e-08 Score=83.69 Aligned_cols=68 Identities=22% Similarity=0.275 Sum_probs=56.4
Q ss_pred cceEEEecCCCCcccccC-ceeeecccCCCCCCCcEEEEECCEEcCC--HHHHHHHHhcCCCCCEEEEEEEECCe-EEEE
Q 013014 350 SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDELLLQGIKQPP-VLSD 425 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aG-l~~~~~~~~~~L~~GDiIl~vnG~~i~~--~~dl~~~l~~~~~g~~v~l~v~R~g~-~~~~ 425 (451)
.|++|.+|.+++||+++| |++ ||+|++|||++|.+ +.++...+.. .++++.++|.|+++ ...+
T Consensus 32 ~gv~V~~V~~gspA~~aG~L~~-----------GD~Il~Vng~~v~~~~~~~~~~~l~~--~~~~v~l~v~R~~~~~~~~ 98 (106)
T 4amh_A 32 NSIYVTKIIEGGAAHKDGKLQI-----------GDKLLAVNNVALEEVTHEEAVTALKN--TSDFVYLKVAKPGSGEKIM 98 (106)
T ss_dssp CCEEEEEECTTSHHHHHCCCCT-----------TCEEEEETTEECSSCCHHHHHHHHHS--CCSEEEEEEECCSSSCSEE
T ss_pred CCEEEEEECCCCHHHHCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHhC--CCCeEEEEEEeCCCCCeEE
Confidence 689999999999999999 999 99999999999965 6677777754 57899999999885 3444
Q ss_pred EEEee
Q 013014 426 NLRLL 430 (451)
Q Consensus 426 ~v~l~ 430 (451)
++++.
T Consensus 99 ~v~l~ 103 (106)
T 4amh_A 99 EIKLI 103 (106)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 55553
No 192
>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=98.76 E-value=1.3e-08 Score=82.61 Aligned_cols=76 Identities=21% Similarity=0.328 Sum_probs=59.3
Q ss_pred cccceeccchhhhhhCccceEEEecCCCCcccccC-ceeeecccCCCCCCCcEEEEECCEEcCCH--HHHHHHHhcCCCC
Q 013014 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVG 409 (451)
Q Consensus 333 ~lGi~~~~~~~~~~~~~~Gv~V~~v~~~s~a~~aG-l~~~~~~~~~~L~~GDiIl~vnG~~i~~~--~dl~~~l~~~~~g 409 (451)
.+|+.+...... ...|++|.+|.+++||+++| |++ ||+|++|||+++.++ .++...+.. .+
T Consensus 16 ~lG~~l~~~~~~---~~~gv~V~~V~~~spA~~aG~l~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~--~~ 79 (98)
T 2opg_A 16 GLGLSIVGGSDT---LLGAIIIHEVYEEGAACKDGRLWA-----------GDQILEVNGIDLRKATHDEAINVLRQ--TP 79 (98)
T ss_dssp BTCEEEEECTTS---TTCSEEEEEECTTSHHHHHCCCCT-----------TCEEEEETTEECTTCCHHHHHHHHHT--CC
T ss_pred cccEEEecCCCC---CCCCEEEEEECCCChHHhCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHh--CC
Confidence 466666532100 12589999999999999999 999 999999999999884 577766664 35
Q ss_pred CEEEEEEEECCeEEE
Q 013014 410 DELLLQGIKQPPVLS 424 (451)
Q Consensus 410 ~~v~l~v~R~g~~~~ 424 (451)
+.+.++|.|+++..+
T Consensus 80 ~~v~l~v~R~~~~~~ 94 (98)
T 2opg_A 80 QRVRLTLYRDEAPYK 94 (98)
T ss_dssp SEEEEEEEECSSCCC
T ss_pred CeEEEEEEcCCCCCc
Confidence 899999999987544
No 193
>1ujd_A KIAA0559 protein; PDZ domain, structural genomics, human cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.76 E-value=2.9e-09 Score=89.70 Aligned_cols=81 Identities=21% Similarity=0.299 Sum_probs=62.3
Q ss_pred cccccccceeccchhhh-hhCccceEEEecCCCCcccccC-ceeeecccCCCCCCCcEEEEECCEEcCC--HHHHHHHHh
Q 013014 329 VTRPILGIKFAPDQSVE-QLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILD 404 (451)
Q Consensus 329 ~~~~~lGi~~~~~~~~~-~~~~~Gv~V~~v~~~s~a~~aG-l~~~~~~~~~~L~~GDiIl~vnG~~i~~--~~dl~~~l~ 404 (451)
.....+|+.+....... .-+-.|++|.+|.+++||+++| |++ ||+|++|||+++.+ +.++..++.
T Consensus 27 ~~~~glG~~i~g~~~~~~~~~~~g~~V~~v~~~s~A~~aG~L~~-----------GD~Il~vng~~v~~~~~~~~~~~l~ 95 (117)
T 1ujd_A 27 VSGNGLGIRIVGGKEIPGHSGEIGAYIAKILPGGSAEQTGKLME-----------GMQVLEWNGIPLTSKTYEEVQSIIS 95 (117)
T ss_dssp SSCCSCSEEEEEEEECSSSSSCEEEEEEEECTTCHHHHHSSCCT-----------TCEEEEETTEECTTCCHHHHHHHHS
T ss_pred CCCCcccEEEeCCCCCCcccCCcCEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEEcCCCCHHHHHHHHh
Confidence 33456777775421100 0112589999999999999999 999 99999999999977 678887776
Q ss_pred cCCCCCEEEEEEEECCeE
Q 013014 405 QCKVGDELLLQGIKQPPV 422 (451)
Q Consensus 405 ~~~~g~~v~l~v~R~g~~ 422 (451)
. .++.++|+|.|+++.
T Consensus 96 ~--~~~~v~l~v~R~~~~ 111 (117)
T 1ujd_A 96 Q--QSGEAEICVRLDLNM 111 (117)
T ss_dssp C--CSSCEEEEEESSCCC
T ss_pred c--CCCEEEEEEEECCcc
Confidence 5 688999999999864
No 194
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=98.75 E-value=1.4e-08 Score=93.19 Aligned_cols=79 Identities=18% Similarity=0.214 Sum_probs=63.9
Q ss_pred ccccceeccchhhhhhCccceEEEecCCCCcccccC-ceeeecccCCCCCCCcEEEEECCEEcC--CHHHHHHHHhcCCC
Q 013014 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCKV 408 (451)
Q Consensus 332 ~~lGi~~~~~~~~~~~~~~Gv~V~~v~~~s~a~~aG-l~~~~~~~~~~L~~GDiIl~vnG~~i~--~~~dl~~~l~~~~~ 408 (451)
.-+|+.+.........+..|++|.+|.+++||+++| |++ ||+|++|||+++. ++.++..++....+
T Consensus 18 ~glG~~i~~~~~~~~~~~~~~~V~~v~~~spA~~aG~l~~-----------GD~I~~vng~~v~~~~~~~~~~~l~~~~~ 86 (196)
T 1p1d_A 18 TGFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQI-----------GDRVMAINGIPTEDSTFEEANQLLRDSSI 86 (196)
T ss_dssp TBCCCEEEECSSCSSSCSCSEEEEECCTTSHHHHTSCCCS-----------SCCEEEETTBCSTTSCHHHHHHHHHTCCS
T ss_pred CccCEEEeCCcCCCCCCCCCEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 346666554211111223679999999999999999 999 9999999999999 68999999988777
Q ss_pred CCEEEEEEEECCe
Q 013014 409 GDELLLQGIKQPP 421 (451)
Q Consensus 409 g~~v~l~v~R~g~ 421 (451)
|++++++|.|+|+
T Consensus 87 g~~v~l~v~R~~~ 99 (196)
T 1p1d_A 87 TSKVTLEIEFDVA 99 (196)
T ss_dssp SSEEEEEEEECSC
T ss_pred CCeEEEEEEecCC
Confidence 9999999999995
No 195
>1uez_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.75 E-value=2.6e-09 Score=87.39 Aligned_cols=61 Identities=26% Similarity=0.300 Sum_probs=53.5
Q ss_pred cceEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEcCCHHHHHHHHhcCCCCCEEEEEEEECCeE
Q 013014 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDELLLQGIKQPPV 422 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i~~~~dl~~~l~~~~~g~~v~l~v~R~g~~ 422 (451)
.|++|.+|.+++||+++||++ ||+|++|||++|.++.+ .+++...+.++++.++|.|+|+.
T Consensus 35 ~g~~V~~V~~~spA~~aGL~~-----------GD~I~~ing~~v~~~~~-~~~~~~~~~~~~v~l~v~R~g~~ 95 (101)
T 1uez_A 35 VGIYVSLVEPGSLAEKEGLRV-----------GDQILRVNDKSLARVTH-AEAVKALKGSKKLVLSVYSAGRI 95 (101)
T ss_dssp CCEEEEEECTTSHHHHHTCCS-----------SCCEEEETTEECSSCCH-HHHHHHSSSSSSCCEEECCCCCC
T ss_pred CCEEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCcCH-HHHHHhhcCCCeEEEEEEECCcc
Confidence 689999999999999999999 99999999999999987 44555556678899999998863
No 196
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=98.74 E-value=1.8e-08 Score=80.72 Aligned_cols=61 Identities=26% Similarity=0.342 Sum_probs=51.8
Q ss_pred cceEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEcCC--HHHHHHHHhcCCCCCEEEEEEEECCeEE
Q 013014 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDELLLQGIKQPPVL 423 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i~~--~~dl~~~l~~~~~g~~v~l~v~R~g~~~ 423 (451)
.|++|.+|.++|||+++||++ ||+|++|||++|.+ +.++...+.. .++++.++|.|++...
T Consensus 24 ~~~~V~~V~~~spA~~aGl~~-----------GD~I~~vng~~v~~~~~~~~~~~l~~--~~~~v~l~v~R~~~~~ 86 (91)
T 2f5y_A 24 SPVRVQAVDSGGPAERAGLQQ-----------LDTVLQLNERPVEHWKCVELAHEIRS--CPSEIILLVWRMVPQV 86 (91)
T ss_dssp SSCEEEEECTTSHHHHHTCCT-----------TCEEEEETTEECTTCCHHHHHHHHHT--CSSEEEEEEEECC---
T ss_pred CCEEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEeCCCCC
Confidence 578999999999999999999 99999999999996 4788877765 4678999999988654
No 197
>2eeg_A PDZ and LIM domain protein 4; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.74 E-value=1.2e-08 Score=82.28 Aligned_cols=59 Identities=20% Similarity=0.256 Sum_probs=51.8
Q ss_pred cceEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEcCCH--HHHHHHHhcCCCCCEEEEEEEECCe
Q 013014 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVGDELLLQGIKQPP 421 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i~~~--~dl~~~l~~~~~g~~v~l~v~R~g~ 421 (451)
.+++|.+|.+++||+++||++ ||+|++|||++|.++ .++...+.. .|+++.++|.|+|+
T Consensus 32 ~~v~V~~V~~~spA~~aGl~~-----------GD~I~~ing~~v~~~~~~~~~~~~~~--~g~~v~l~v~R~g~ 92 (94)
T 2eeg_A 32 APLTISRVHAGSKAALAALCP-----------GDLIQAINGESTELMTHLEAQNRIKG--CHDHLTLSVSSGPS 92 (94)
T ss_dssp SCCEECCCCSSSHHHHTTCCT-----------TCEEEEETTEETTTCCHHHHHHHHHT--CCSCEEEEEECCSS
T ss_pred CCEEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEeCCC
Confidence 578999999999999999999 999999999999996 566666654 68899999999886
No 198
>2e7k_A Maguk P55 subfamily member 2; PDZ domain, MPP2 protein, discs large homolog 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.74 E-value=9.5e-09 Score=82.52 Aligned_cols=70 Identities=27% Similarity=0.452 Sum_probs=60.3
Q ss_pred cccccceeccchhhhhhCccceEEEecCCCCcccccC-ceeeecccCCCCCCCcEEEEECCEEc-CCHHHHHHHHhcCCC
Q 013014 331 RPILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKV-SNGSDLYRILDQCKV 408 (451)
Q Consensus 331 ~~~lGi~~~~~~~~~~~~~~Gv~V~~v~~~s~a~~aG-l~~~~~~~~~~L~~GDiIl~vnG~~i-~~~~dl~~~l~~~~~ 408 (451)
..+||+.+... ..|++|.+|.+++||+++| |++ ||+|++|||++| .+++|+.+++.. .
T Consensus 17 ~~~lG~~i~~~-------~~~v~V~~V~~~spA~~ag~L~~-----------GD~I~~ing~~v~~~~~~~~~~l~~--~ 76 (91)
T 2e7k_A 17 GEHLGVTFRVE-------GGELVIARILHGGMVAQQGLLHV-----------GDIIKEVNGQPVGSDPRALQELLRN--A 76 (91)
T ss_dssp TCCCCEEEEES-------SSSEEEEEECSSSHHHHHCCCCT-----------TCEEEEETTEECTTCHHHHHHHHHT--C
T ss_pred CCcEeEEEEec-------CCCEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEECCCCHHHHHHHHHc--C
Confidence 36788888762 2689999999999999987 998 999999999999 999999999986 3
Q ss_pred CCEEEEEEEECC
Q 013014 409 GDELLLQGIKQP 420 (451)
Q Consensus 409 g~~v~l~v~R~g 420 (451)
++++.++|.|..
T Consensus 77 ~~~v~l~v~~~~ 88 (91)
T 2e7k_A 77 SGSVILKILSGP 88 (91)
T ss_dssp CSSBCEEEECCS
T ss_pred CCeEEEEEEECC
Confidence 678999998754
No 199
>1va8_A Maguk P55 subfamily member 5; PDZ domain, palmitoylated 5, PALS1 protein, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.74 E-value=1.1e-08 Score=85.56 Aligned_cols=60 Identities=22% Similarity=0.375 Sum_probs=54.0
Q ss_pred cceEEEecCCCCcccccCc-eeeecccCCCCCCCcEEEEECCEEcC--CHHHHHHHHhcCCCCCEEEEEEEECCeE
Q 013014 350 SGVLVLDAPPNGPAGKAGL-LSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCKVGDELLLQGIKQPPV 422 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aGl-~~~~~~~~~~L~~GDiIl~vnG~~i~--~~~dl~~~l~~~~~g~~v~l~v~R~g~~ 422 (451)
.|++|.+|.+++||+++|| ++ ||+|++|||++|. ++.++.+++... ++++.++|.|+++.
T Consensus 48 ~gv~V~~V~~~spA~~aGll~~-----------GD~I~~vng~~v~~~~~~~~~~~l~~~--~~~v~l~v~r~~~~ 110 (113)
T 1va8_A 48 DSVIISRIVKGGAAEKSGLLHE-----------GDEVLEINGIEIRGKDVNEVFDLLSDM--HGTLTFVLIPSSGP 110 (113)
T ss_dssp SSEEEEEECTTSHHHHHTCCCT-----------TCEEEEETTEECTTCCHHHHHHHHHHC--CEEEEEEEECCCCC
T ss_pred CCEEEEEeCCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHcC--CCeEEEEEEECCcc
Confidence 6899999999999999999 98 9999999999999 678999988753 46899999999874
No 200
>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A
Probab=98.73 E-value=7.7e-09 Score=84.63 Aligned_cols=62 Identities=26% Similarity=0.334 Sum_probs=54.9
Q ss_pred cceEEEecCCCCcccccC-ceeeecccCCCCCCCcEEEEECCEEcCC--HHHHHHHHhcCCCCCEEEEEEEECCeEEE
Q 013014 350 SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDELLLQGIKQPPVLS 424 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aG-l~~~~~~~~~~L~~GDiIl~vnG~~i~~--~~dl~~~l~~~~~g~~v~l~v~R~g~~~~ 424 (451)
.|++|.+|.+++||+++| |++ ||+|++|||++|.+ +.++...+.. .|+.+.++|.|+++..+
T Consensus 34 ~gv~V~~V~~~spA~~aG~L~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~--~g~~v~l~v~R~~~~~~ 98 (102)
T 2i1n_A 34 PGIFITKIIPGGAAAMDGRLGV-----------NDCVLRVNEVDVSEVVHSRAVEALKE--AGPVVRLVVRRRQPPPE 98 (102)
T ss_dssp CCEEEEEECTTSHHHHHCCCCT-----------TCEEEEETTEECSSCCHHHHHHHHHH--SCSEEEEEEEEECCCCS
T ss_pred CCEEEEEECCCCHHHHCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEeCCCCCC
Confidence 699999999999999999 999 99999999999987 6777777765 58999999999887543
No 201
>1uew_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.73 E-value=1e-08 Score=85.76 Aligned_cols=59 Identities=27% Similarity=0.367 Sum_probs=54.4
Q ss_pred ceEEEecCCCCcccc-cCceeeecccCCCCCCCcEEEEECCEEcCC--HHHHHHHHhcCCCCCEEEEEEEECCeE
Q 013014 351 GVLVLDAPPNGPAGK-AGLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDELLLQGIKQPPV 422 (451)
Q Consensus 351 Gv~V~~v~~~s~a~~-aGl~~~~~~~~~~L~~GDiIl~vnG~~i~~--~~dl~~~l~~~~~g~~v~l~v~R~g~~ 422 (451)
+++|.+|.+++||++ +||++ ||+|++|||++|.+ +.++.+++.. .|+.+.|+|.|+++.
T Consensus 44 ~~~V~~V~~~spA~~~agL~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~--~g~~v~l~v~r~~~~ 105 (114)
T 1uew_A 44 PHKIGRIIDGSPADRCAKLKV-----------GDRILAVNGQSIINMPHADIVKLIKD--AGLSVTLRIIPQEEL 105 (114)
T ss_dssp SCEEEEECTTCTTGGGSSCCT-----------TCBEEEETTBCTTTSCHHHHHHHHHH--TTTEEEEEECCCSCC
T ss_pred CeEEEEECCCChHHHhCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEeCCcC
Confidence 679999999999999 99999 99999999999999 5899999886 689999999998864
No 202
>2odp_A Complement C2; C3/C5 convertase, complement serin protease, human complement system, glycoprotein, SP, VWFA,; HET: NAG; 1.90A {Homo sapiens} PDB: 2odq_A* 2i6q_A* 2i6s_A*
Probab=98.73 E-value=2e-08 Score=105.17 Aligned_cols=174 Identities=17% Similarity=0.182 Sum_probs=96.0
Q ss_pred CeEEEEEEEcCCCeEEecccccCCC---CcEEEEeCC-----CcEEEEEEEEEcC----------------CCCEEEEEE
Q 013014 151 QGSGSGFVWDSKGHVVTNYHVIRGA---SDIRVTFAD-----QSAYDAKIVGFDQ----------------DKDVAVLRI 206 (451)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHVv~~~---~~i~V~~~d-----g~~~~a~vv~~d~----------------~~DlAlLkv 206 (451)
...|.|.+|+++ ||||+|||+.+. ..+.|++.. ++.+..+-+..|| .+|||||++
T Consensus 246 ~~~CgGsLIs~~-~VLTAAHC~~~~~~~~~~~V~~G~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~~~~~~~nDIALl~L 324 (509)
T 2odp_A 246 QETCRGALISDQ-WVLTAAHCFRDGNDHSLWRVNVGDPKSQWGKEFLIEKAVISPGFDVFAKKNQGILEFYGDDIALLKL 324 (509)
T ss_dssp --CEEEEECSSS-EEEECGGGC--------CEEEECCTTCTTCEEECEEEEEECTTCCTTTTGGGTCCCCCTTCCEEEEE
T ss_pred CcEEEEEEEcCC-EEEEcHHHcCCCCCcceEEEEeCCcccCCCceeeeEEEEECCCCccccccccccccccCCCeEEEEE
Confidence 457999999986 999999999753 456676643 3456666555554 259999999
Q ss_pred cCCC---CCCcceecCCCC------CCCCCcEEEEeeCCCCCCCce------------EEeEEeeeeeeecc--------
Q 013014 207 DAPK---DKLRPIPIGVSA------DLLVGQKVYAIGNPFGLDHTL------------TTGVISGLRREISS-------- 257 (451)
Q Consensus 207 ~~~~---~~~~~l~l~~s~------~~~~G~~V~~iG~p~g~~~~~------------~~G~Vs~~~~~~~~-------- 257 (451)
+.+. ....|+.|.... ....|..+.+.||........ ....+..+....+.
T Consensus 325 ~~~v~~~~~v~picLp~~~~~~~~~~~~~g~~~~~~g~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~C~~~~~~~~~ 404 (509)
T 2odp_A 325 AQKVKMSTHARPICLPCTMEANLALRRPQGSTCRDHENELLNKQSVPAHFVALNGSKLNINLKMGVEWTSCAEVVSQEKT 404 (509)
T ss_dssp SSCCCCBTTBCCCBCTTBHHHHHHTTCCTTCCHHHHHHHHSCSSEEEEEEECTTSCEEEEEEECTHHHHHHHHGGGGCTT
T ss_pred CCcccCCCCcccccCCCCcccchhhccCCCCccccccccccccccceeeeecccCceeeEEEecCccHHHHHHHhhcccc
Confidence 8764 245677775321 124466555555431111111 11111100111110
Q ss_pred -CC-----CCCCcccEEEEc----ccCCCCCCCCceeCCC-c--eEEEEEeeeeC-CCCC-----------ccce----e
Q 013014 258 -AA-----TGRPIQDVIQTD----AAINPGNSGGPLLDSS-G--SLIGINTAIYS-PSGA-----------SSGV----G 308 (451)
Q Consensus 258 -~~-----~~~~~~~~i~~d----~~i~~G~SGGPlvd~~-G--~VVGI~s~~~~-~~~~-----------~~~~----~ 308 (451)
+. .......++... ...|.|+|||||+-.. | .++||+|++.. .|+. ..+. +
T Consensus 405 ~~~~~~~~~~~~~~~~iCag~~~~~~~C~GDSGGPL~~~~~~~~~l~GIvS~G~~~~C~~~~~~~~~~~~~~Pg~~y~~~ 484 (509)
T 2odp_A 405 MFPNLTDVREVVTDQFLCSGTQEDESPCKGESGGAVFLERRFRFFQVGLVSWGLYNPCLGSADKNSRKRAPRSKVPPPRD 484 (509)
T ss_dssp TCTTCSSGGGTSCTTEEEECCTTCCCCCGGGTTCEEEEEETTEEEEEEEEEEESCCTTC-----CCCCCCCTTCSSCCCE
T ss_pred cccccccccccccCCEEEeCCCCCCcccCCCccCceEEEECCeEEEEEEEEEcCCCCCCCcccccccccCcccCCCCCCc
Confidence 10 001113445442 3578899999998542 3 49999998863 3431 1111 4
Q ss_pred EEEeccCchhhHHHhhh
Q 013014 309 FSIPVDTVNGIVDQLVK 325 (451)
Q Consensus 309 ~aIP~~~i~~~l~~l~~ 325 (451)
+...+....+||++.++
T Consensus 485 vyt~V~~~~~WI~~~~~ 501 (509)
T 2odp_A 485 FHINLFRMQPWLRQHLG 501 (509)
T ss_dssp EEEEGGGCHHHHHHHHT
T ss_pred eeeeHHHHhHHHHHHhC
Confidence 67778888889988664
No 203
>2dmz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.73 E-value=6.4e-09 Score=88.97 Aligned_cols=62 Identities=24% Similarity=0.394 Sum_probs=57.2
Q ss_pred cceEEEecCCCCcccccC-ceeeecccCCCCCCCcEEEEECCEEcCC--HHHHHHHHhcCCCCCEEEEEEEECCeEEE
Q 013014 350 SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDELLLQGIKQPPVLS 424 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aG-l~~~~~~~~~~L~~GDiIl~vnG~~i~~--~~dl~~~l~~~~~g~~v~l~v~R~g~~~~ 424 (451)
.|++|.+|.+++||+++| |++ ||+|++|||++|.+ +.++.+++.. .|+.+.|+|.|+|+..+
T Consensus 46 ~gv~V~~V~~~spA~~aG~L~~-----------GD~I~~vng~~v~~~~~~~~~~~l~~--~~~~v~l~v~R~~~~~~ 110 (129)
T 2dmz_A 46 SGIYVKSVIPGSAAYHNGHIQV-----------NDKIVAVDGVNIQGFANHDVVEVLRN--AGQVVHLTLVRRKTSSS 110 (129)
T ss_dssp CEEEEEEECTTSHHHHHTCCCS-----------SCBEEEETTBCCTTCCHHHHHHHHHH--CCSSEEEEEEEESSSSS
T ss_pred CCEEEEEeCCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEeCCcccc
Confidence 789999999999999999 999 99999999999999 8999999886 68999999999987544
No 204
>1d5g_A Human phosphatase HPTP1E; protein-peptide complex, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 3lnx_A 3lny_A 3pdz_A 1vj6_A 1gm1_A 1ozi_A
Probab=98.73 E-value=2e-08 Score=81.12 Aligned_cols=59 Identities=25% Similarity=0.363 Sum_probs=53.1
Q ss_pred cceEEEecCCCCcccccC-ceeeecccCCCCCCCcEEEEECCEEcC--CHHHHHHHHhcCCCCCEEEEEEEECCe
Q 013014 350 SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCKVGDELLLQGIKQPP 421 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aG-l~~~~~~~~~~L~~GDiIl~vnG~~i~--~~~dl~~~l~~~~~g~~v~l~v~R~g~ 421 (451)
.|++|.+|.++|||+++| |++ ||+|++|||+++. ++.++..++.. .|+++.++|.|++.
T Consensus 33 ~g~~V~~V~~~spA~~aG~l~~-----------GD~I~~vng~~v~~~~~~~~~~~l~~--~g~~v~l~v~R~~~ 94 (96)
T 1d5g_A 33 GGIYVKAVIPQGAAESDGRIHK-----------GDRVLAVNGVSLEGATHKQAVETLRN--TGQVVHLLLEKGQS 94 (96)
T ss_dssp SCCEEEEECTTSHHHHTTCCCT-----------TCEEEEETTEECTTCCHHHHHHHHHS--CCSEEEEEEECCSC
T ss_pred CCEEEEEeCCCChHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEcCCC
Confidence 689999999999999999 999 9999999999999 56788877765 58999999999874
No 205
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=98.73 E-value=1.2e-08 Score=94.83 Aligned_cols=84 Identities=19% Similarity=0.226 Sum_probs=67.9
Q ss_pred cccccceeccc--hhhhhhCccceEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEcCCHHHHHHHHhcCCC
Q 013014 331 RPILGIKFAPD--QSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKV 408 (451)
Q Consensus 331 ~~~lGi~~~~~--~~~~~~~~~Gv~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i~~~~dl~~~l~~~~~ 408 (451)
+.++|+.+... ..++ ..|++|.+|.++|||+++||++ .||+|++|||+ |.+++|+.+++... +
T Consensus 94 ~~~lGi~~~~~~~~~~~---~~Gv~V~~V~~~spA~~aGl~~----------~GD~I~~ing~-v~~~~~l~~~l~~~-~ 158 (209)
T 3rle_A 94 QGLLGVSIRFCSFDGAN---ENVWHVLEVESNSPAALAGLRP----------HSDYIIGADTV-MNESEDLFSLIETH-E 158 (209)
T ss_dssp SSSSCEEEEEEECTTGG---GSCEEEEEECTTSHHHHHTCCT----------TTEEEEEESSC-CCSSSCHHHHHHHT-T
T ss_pred cCccceEEeecChhHcc---ccceEEEEeCCCChHHHCCCCC----------CCCEEEECCCE-eCCHHHHHHHHHhC-C
Confidence 57899988742 1122 1799999999999999999985 16999999998 99999999999886 8
Q ss_pred CCEEEEEEEECCeE--EEEEEEe
Q 013014 409 GDELLLQGIKQPPV--LSDNLRL 429 (451)
Q Consensus 409 g~~v~l~v~R~g~~--~~~~v~l 429 (451)
|+++.++|.|++.. .++++++
T Consensus 159 g~~v~l~v~r~~~~~~~~v~l~p 181 (209)
T 3rle_A 159 AKPLKLYVYNTDTDNCREVIITP 181 (209)
T ss_dssp TSCEEEEEEETTTTEEEEEEECC
T ss_pred CCeEEEEEEECCceEEEEEEEEe
Confidence 99999999998654 4555544
No 206
>2edz_A PDZ domain-containing protein 1; CFTR-associated protein of 70 kDa, Na/PI cotransporter C- terminal-associated protein, NAPI-CAP1; NMR {Mus musculus}
Probab=98.73 E-value=7.7e-09 Score=86.55 Aligned_cols=66 Identities=24% Similarity=0.351 Sum_probs=58.0
Q ss_pred cceEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEcCCH--HHHHHHHhcCCCCCEEEEEEEECCeEEEEEE
Q 013014 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVGDELLLQGIKQPPVLSDNL 427 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i~~~--~dl~~~l~~~~~g~~v~l~v~R~g~~~~~~v 427 (451)
.|++|.+|.++|||+++||++ ||+|++|||++|.++ .++.+.+.. .|+++.++|.|+++..++++
T Consensus 38 ~g~~V~~V~~~spA~~aGL~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~--~g~~v~l~v~R~~~~~~~~~ 104 (114)
T 2edz_A 38 DGHLIRVIEEGSPAEKAGLLD-----------GDRVLRINGVFVDKEEHAQVVELVRK--SGNSVTLLVLDGDSYEKAVK 104 (114)
T ss_dssp CSCEEECCCTTCTTGGGTCCT-----------TCEEEEESSSBCSSSCHHHHHHHHHH--TCSEEEEEEECHHHHHHHHH
T ss_pred CCeEEEEeCCCChHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCEEEEEEEECCcceehhh
Confidence 689999999999999999999 999999999999985 788888875 48999999999987655444
Q ss_pred E
Q 013014 428 R 428 (451)
Q Consensus 428 ~ 428 (451)
+
T Consensus 105 ~ 105 (114)
T 2edz_A 105 N 105 (114)
T ss_dssp H
T ss_pred c
Confidence 3
No 207
>2fne_A Multiple PDZ domain protein; structural protein, structural genomics, SGC, structural genomics consortium, unknown function; 1.83A {Homo sapiens} SCOP: b.36.1.1
Probab=98.72 E-value=1.5e-08 Score=85.30 Aligned_cols=60 Identities=23% Similarity=0.326 Sum_probs=53.9
Q ss_pred cceEEEecCCCCcccccC-ceeeecccCCCCCCCcEEEEECCEEcC--CHHHHHHHHhcCCCCCEEEEEEEECCeE
Q 013014 350 SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCKVGDELLLQGIKQPPV 422 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aG-l~~~~~~~~~~L~~GDiIl~vnG~~i~--~~~dl~~~l~~~~~g~~v~l~v~R~g~~ 422 (451)
.|++|.+|.++|||+++| |++ ||+|++|||++|. ++.++..++.. .+++++++|.|+|+.
T Consensus 53 ~gv~V~~V~~~spA~~aG~L~~-----------GD~Il~Vng~~v~~~~~~~~~~~l~~--~~~~v~l~v~R~g~~ 115 (117)
T 2fne_A 53 LPIYVKTVFAKGAASEDGRLKR-----------GDQIIAVNGQSLEGVTHEEAVAILKR--TKGTVTLMVLSSDET 115 (117)
T ss_dssp EEEEEEEECTTSHHHHHCCCCT-----------TCEEEEETTEECTTCCHHHHHHHHHH--CCSSEEEEEEECSCE
T ss_pred CCEEEEEECCCChHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEeCCcc
Confidence 589999999999999999 999 9999999999999 78888888875 355699999999875
No 208
>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}
Probab=98.72 E-value=8e-09 Score=83.39 Aligned_cols=60 Identities=27% Similarity=0.410 Sum_probs=51.7
Q ss_pred cceEEEecCCCCcccccC-ceeeecccCCCCCCCcEEEEECCEEcCCH--HHHHHHHhcCCCCCEEEEEEEECCeE
Q 013014 350 SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVGDELLLQGIKQPPV 422 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aG-l~~~~~~~~~~L~~GDiIl~vnG~~i~~~--~dl~~~l~~~~~g~~v~l~v~R~g~~ 422 (451)
.|++|.+|.++|||+++| |++ ||+|++|||+++.+. .+....+.. .|+.+.++|.|+++.
T Consensus 29 ~gv~V~~V~~~spA~~aG~L~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~--~g~~v~l~v~R~~~~ 91 (95)
T 2vwr_A 29 PGVFILDLLEGGLAAQDGRLSS-----------NDRVLAINGHDLKYGTPELAAQIIQA--SGERVNLTIARPGKP 91 (95)
T ss_dssp CSEEEEEECTTSHHHHHCCCCT-----------TCEEEEETTEECTTCCHHHHHHHHHH--CCSEEEEEEEEESCS
T ss_pred CCEEEEEeCCCChHHHCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCEEEEEEEcCCcC
Confidence 589999999999999999 999 999999999999874 555555543 589999999998763
No 209
>3ngh_A PDZ domain-containing protein 1; adaptor protein, SR-BI, signaling protein; 1.80A {Mus musculus} SCOP: b.36.1.0
Probab=98.72 E-value=6e-09 Score=85.90 Aligned_cols=61 Identities=26% Similarity=0.398 Sum_probs=54.8
Q ss_pred cceEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEcCCHH--HHHHHHhcCCCCCEEEEEEEECCeEE
Q 013014 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGS--DLYRILDQCKVGDELLLQGIKQPPVL 423 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i~~~~--dl~~~l~~~~~g~~v~l~v~R~g~~~ 423 (451)
.|++|..|.++|||+++||++ ||+|++|||+++.++. ++..++.. .|+++.++|.|+++..
T Consensus 26 ~g~~V~~V~~~spA~~aGl~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~--~g~~v~l~v~r~~~~~ 88 (106)
T 3ngh_A 26 DGHLIRVIEEGSPAEKAGLLD-----------GDRVLRINGVFVDKEEHAQVVELVRK--SGNSVTLLVLDGDSYE 88 (106)
T ss_dssp CSCEEECCCTTSHHHHTTCCT-----------TCEEEEETTEECTTSCHHHHHHHHHH--TTTEEEEEEECHHHHH
T ss_pred CCEEEEEeCCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHh--CCCEEEEEEEECCeee
Confidence 589999999999999999999 9999999999999986 88888873 6899999999987643
No 210
>1m5z_A GRIP, AMPA receptor interacting protein; six beta-strands and two alpha-helices, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=98.72 E-value=1.3e-08 Score=81.40 Aligned_cols=57 Identities=25% Similarity=0.335 Sum_probs=49.1
Q ss_pred cceEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEcCCHHH--HHHHHhcCCCCCEEEEEEEEC
Q 013014 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSD--LYRILDQCKVGDELLLQGIKQ 419 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i~~~~d--l~~~l~~~~~g~~v~l~v~R~ 419 (451)
.|++|.+|.+++||+++||++ ||+|++|||+++.++.+ +...+. ..|+.+.++|.|+
T Consensus 32 ~gv~V~~V~~~spA~~aGl~~-----------GD~I~~vng~~v~~~~~~~~~~~~~--~~g~~v~l~v~R~ 90 (91)
T 1m5z_A 32 KGVYVKNIRPAGPGDLGGLKP-----------YDRLLQVNHVRTRDFDCCLVVPLIA--ESGNKLDLVISRN 90 (91)
T ss_dssp SCEEEEEECTTSHHHHHTCCT-----------TCEEEEETTEECTTCCHHHHHHHHH--TSTTEEEEEEEEC
T ss_pred CCEEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHH--cCCCEEEEEEEeC
Confidence 689999999999999999999 99999999999999753 334444 3589999999986
No 211
>1nf3_C PAR-6B; semi-CRIB motif, switch I and II, PDZ domain, GTPase binding domain, signaling protein; HET: GNP; 2.10A {Mus musculus} SCOP: b.36.1.1 PDB: 2lc6_A 1ry4_A 1x8s_A 2lc7_A 1rzx_A
Probab=98.72 E-value=8e-09 Score=88.40 Aligned_cols=59 Identities=20% Similarity=0.301 Sum_probs=53.5
Q ss_pred cceEEEecCCCCcccccC-ceeeecccCCCCCCCcEEEEECCEEc--CCHHHHHHHHhcCCCCCEEEEEEEECCe
Q 013014 350 SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKV--SNGSDLYRILDQCKVGDELLLQGIKQPP 421 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aG-l~~~~~~~~~~L~~GDiIl~vnG~~i--~~~~dl~~~l~~~~~g~~v~l~v~R~g~ 421 (451)
.|++|.+|.+++||+++| |++ ||+|++|||++| .++.++..++.. .++.+.++|.|+++
T Consensus 65 ~gv~V~~V~~~spA~~aG~L~~-----------GD~Il~vng~~v~~~~~~~~~~~l~~--~~~~v~l~v~r~~~ 126 (128)
T 1nf3_C 65 PGIFISRLVPGGLAQSTGLLAV-----------NDEVLEVNGIEVSGKSLDQVTDMMIA--NSRNLIITVRPANQ 126 (128)
T ss_dssp EEEEEEEECTTCHHHHHTCCCT-----------TCEEEEETTEESTTCCHHHHHHHHHH--TTTSEEEEEECCCC
T ss_pred CCEEEEEECCCCHHHHCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEECCc
Confidence 589999999999999999 898 999999999999 788899988874 46679999999886
No 212
>2r4h_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; transferase, STRU genomics, structural genomics consortium, SGC, ATP-binding; HET: HIS; 2.05A {Homo sapiens}
Probab=98.71 E-value=2.3e-08 Score=83.37 Aligned_cols=73 Identities=22% Similarity=0.317 Sum_probs=57.8
Q ss_pred cccceeccchhhhhhCccceEEEecCCCCcccccC-ceeeecccCCCCCCCcEEEEECCEEcCCH--HHHHHHHhcCCCC
Q 013014 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVG 409 (451)
Q Consensus 333 ~lGi~~~~~~~~~~~~~~Gv~V~~v~~~s~a~~aG-l~~~~~~~~~~L~~GDiIl~vnG~~i~~~--~dl~~~l~~~~~g 409 (451)
.+|+.+...... ..|++|.+|.+++||+++| |++ ||+|++|||++|.++ .++...+.. .|
T Consensus 36 glG~~l~~~~~~----~~gv~V~~V~~~spA~~aG~L~~-----------GD~Il~Vng~~v~~~~~~~~~~~l~~--~g 98 (112)
T 2r4h_A 36 GFGFSLRGGREY----NMDLYVLRLAEDGPAERSGKMRI-----------GDEILEINGETTKNMKHSRAIELIKN--GG 98 (112)
T ss_dssp BTSEEEEECGGG----TCCEEEEEECTTSHHHHTTCCCT-----------TCEEEEETTEECTTCCHHHHHHHHHT--TT
T ss_pred ccCEEEeccccC----CCCEEEEEECCCChHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CC
Confidence 366666532111 2689999999999999999 999 999999999999774 566666654 58
Q ss_pred CEEEEEEEECCeE
Q 013014 410 DELLLQGIKQPPV 422 (451)
Q Consensus 410 ~~v~l~v~R~g~~ 422 (451)
++++++|.|+++.
T Consensus 99 ~~v~l~v~R~~~~ 111 (112)
T 2r4h_A 99 RRVRLFLKRGETS 111 (112)
T ss_dssp TEEEEEEECCEEE
T ss_pred CeEEEEEEeCCcc
Confidence 9999999998764
No 213
>2fe5_A Presynaptic protein SAP102; PDZ domain, DLG3, human, structural genomics, structural GEN consortium, SGC, structural protein; HET: GOL; 1.10A {Homo sapiens} SCOP: b.36.1.1 PDB: 2x7z_A 2oqs_A 1qlc_A 2i0l_A
Probab=98.71 E-value=2.5e-08 Score=80.19 Aligned_cols=59 Identities=22% Similarity=0.307 Sum_probs=51.5
Q ss_pred cceEEEecCCCCcccccC-ceeeecccCCCCCCCcEEEEECCEEcCCH--HHHHHHHhcCCCCCEEEEEEEECCe
Q 013014 350 SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVGDELLLQGIKQPP 421 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aG-l~~~~~~~~~~L~~GDiIl~vnG~~i~~~--~dl~~~l~~~~~g~~v~l~v~R~g~ 421 (451)
.|++|.+|.+++||+++| |++ ||+|++|||+++.++ .++...+.. .++++.++|.|+|+
T Consensus 33 ~gv~V~~V~~~spA~~aG~l~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~--~~~~v~l~v~R~g~ 94 (94)
T 2fe5_A 33 NSIYITKIIEGGAAQKDGRLQI-----------GDRLLAVNNTNLQDVRHEEAVASLKN--TSDMVYLKVAKPGS 94 (94)
T ss_dssp CCEEEEEECTTSHHHHHCCCCT-----------TCEEEEETTEECTTCBHHHHHHHHHT--CCSEEEEEEECCCC
T ss_pred CCEEEEEECCCChHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEcCCC
Confidence 689999999999999999 999 999999999999884 677766654 46799999999874
No 214
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=98.70 E-value=1.1e-08 Score=81.71 Aligned_cols=60 Identities=23% Similarity=0.299 Sum_probs=52.7
Q ss_pred cceEEEecCCCCcccccC-ceeeecccCCCCCCCcEEEEECCEEc--CCHHHHHHHHhcCCCCCEEEEEEEECC
Q 013014 350 SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKV--SNGSDLYRILDQCKVGDELLLQGIKQP 420 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aG-l~~~~~~~~~~L~~GDiIl~vnG~~i--~~~~dl~~~l~~~~~g~~v~l~v~R~g 420 (451)
.+++|.+|.++|||+++| |++ ||+|++|||+++ .++.++..++.....+++++++|.|.+
T Consensus 27 ~~~~V~~V~~~spA~~aG~L~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~v~l~v~R~~ 89 (90)
T 2q9v_A 27 EPIYIGHIVPLGAADTDGRLRS-----------GDELISVDGTPVIGKSHQLVVQLMQQAAKQGHVNLTVRQTR 89 (90)
T ss_dssp SCEEEEEECTTSHHHHHCCCCT-----------TCEEEEETTEECTTSCHHHHHHHHHHHHHHTEEEEEEEECC
T ss_pred CCEEEEEECCCChHHHCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEecc
Confidence 568999999999999999 999 999999999999 668898888876544569999999864
No 215
>1ujv_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics, KIAA0705 protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.70 E-value=2.9e-08 Score=80.49 Aligned_cols=60 Identities=28% Similarity=0.403 Sum_probs=52.5
Q ss_pred cceEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEcCCH--HHHHHHHhcCCCCCEEEEEEEECCeE
Q 013014 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVGDELLLQGIKQPPV 422 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i~~~--~dl~~~l~~~~~g~~v~l~v~R~g~~ 422 (451)
.|++|.++.+ +|+++||++ ||+|++|||++|.++ .++.++|....+|+++.|+|.|+++.
T Consensus 32 ~Gv~V~~v~~--~a~~aGL~~-----------GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~g~~ 93 (96)
T 1ujv_A 32 TGQRVKQILD--IQGCPGLCE-----------GDLIVEINQQNVQNLSHTEVVDILKDCPIGSETSLIIHRGSGP 93 (96)
T ss_dssp TEEEEEEESC--GGGSTTCCS-----------SCEEEEETTEECSSCCHHHHHHHHHHSCTTSEEEEEEECCSSC
T ss_pred CCEEEEEEec--ccccCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHcCCCCCEEEEEEEECCCC
Confidence 4789999987 378999999 999999999999875 89999998866699999999998863
No 216
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=98.70 E-value=1.8e-08 Score=86.62 Aligned_cols=61 Identities=20% Similarity=0.273 Sum_probs=56.0
Q ss_pred cceEEEecCCCCcccccC-ceeeecccCCCCCCCcEEEEECCEEcCC--HHHHHHHHhcCCCCCEEEEEEEECCe
Q 013014 350 SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDELLLQGIKQPP 421 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aG-l~~~~~~~~~~L~~GDiIl~vnG~~i~~--~~dl~~~l~~~~~g~~v~l~v~R~g~ 421 (451)
.|++|.+|.+++||+++| |++ ||+|++|||+++.+ +.++.+++....+|++++|+|.|++.
T Consensus 65 ~gv~V~~V~~gspA~~aG~L~~-----------GD~Il~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~g~ 128 (131)
T 1wfg_A 65 LCAFITKVKKGSLADTVGHLRP-----------GDEVLEWNGRLLQGATFEEVYNIILESKPEPQVELVVSRSGP 128 (131)
T ss_dssp EEEEEEEECTTSHHHHTSCCCT-----------TCEEEEETTEECTTCCHHHHHHHHHHTSSSSEEEEEEEEECS
T ss_pred CCEEEEEECCCChHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEEEEcCCC
Confidence 589999999999999999 999 99999999999975 58999999887788999999999874
No 217
>2d90_A PDZ domain containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.70 E-value=1.7e-08 Score=82.60 Aligned_cols=72 Identities=25% Similarity=0.404 Sum_probs=59.0
Q ss_pred cccceeccchhhhhhCccceEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEcCCH--HHHHHHHhcCCCCC
Q 013014 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVGD 410 (451)
Q Consensus 333 ~lGi~~~~~~~~~~~~~~Gv~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i~~~--~dl~~~l~~~~~g~ 410 (451)
.+|+.+.... +..|++|.+|.+++||+++||++ ||+|++|||++|.++ .++.+.+.. .|+
T Consensus 18 g~G~~l~~~~-----~~~g~~V~~V~~~spA~~aGl~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~--~g~ 79 (102)
T 2d90_A 18 GYGFYLRAGP-----EQKGQIIKDIEPGSPAEAAGLKN-----------NDLVVAVNGKSVEALDHDGVVEMIRK--GGD 79 (102)
T ss_dssp SSSCEEEECS-----SSSSEEEECCCTTSTTTTTTCCT-----------TCEEEEESSCBCTTSCHHHHHHHHHH--STT
T ss_pred CccEEEEeec-----CCCCEEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCC
Confidence 4666665321 12689999999999999999999 999999999999984 788888875 489
Q ss_pred EEEEEEEECCeE
Q 013014 411 ELLLQGIKQPPV 422 (451)
Q Consensus 411 ~v~l~v~R~g~~ 422 (451)
++.++|.|+++.
T Consensus 80 ~v~l~v~r~~~~ 91 (102)
T 2d90_A 80 QTTLLVLDKEAE 91 (102)
T ss_dssp EEEEEECSTTCC
T ss_pred EEEEEEEECCCc
Confidence 999999987654
No 218
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=98.69 E-value=3.3e-08 Score=89.94 Aligned_cols=89 Identities=18% Similarity=0.177 Sum_probs=65.7
Q ss_pred cccceeccchhhhh-hCccceEEEecCCCCcccccC-ceeeecccCCCCCCCcEEEEECCEEcCCHHHHHHHHhcCCCCC
Q 013014 333 ILGIKFAPDQSVEQ-LGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGD 410 (451)
Q Consensus 333 ~lGi~~~~~~~~~~-~~~~Gv~V~~v~~~s~a~~aG-l~~~~~~~~~~L~~GDiIl~vnG~~i~~~~dl~~~l~~~~~g~ 410 (451)
-+|+.+........ .+..|++|.+|.++|||+++| |++ ||+|++|||+++.++.++.........|+
T Consensus 17 ~lG~~i~~g~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~~g~ 85 (196)
T 3gsl_A 17 GLGFSIAGGTDNPHIGDDPSIFITKIIPGGAAAQDGRLRV-----------NDSILFVNEVDVREVTHSAAVEALKEAGS 85 (196)
T ss_dssp BSSEEEECCTTSCTTSSCCCEEEEEECTTSHHHHHCCCCT-----------TCEEEEETTEECTTCCHHHHHHHHHTSCS
T ss_pred CCCEEEEcccCCcccCCCCCEEEEEECCCChHHhcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 36776654221111 123699999999999999999 999 99999999999999866555444335689
Q ss_pred EEEEEEEECC--eEEEEEEEeeec
Q 013014 411 ELLLQGIKQP--PVLSDNLRLLWS 432 (451)
Q Consensus 411 ~v~l~v~R~g--~~~~~~v~l~~~ 432 (451)
.+.+++.|++ ....+++++...
T Consensus 86 ~v~l~v~r~~~~~~~~~~v~l~~~ 109 (196)
T 3gsl_A 86 IVRLYVMRRKPPAEKVMEIKLIKG 109 (196)
T ss_dssp EEEEEEEEECCCCEEEEEEEEEEB
T ss_pred cEEEEEEecCCCccccEEEEEecC
Confidence 9999999988 455566665443
No 219
>2djt_A Unnamed protein product; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.69 E-value=1.8e-08 Score=82.77 Aligned_cols=60 Identities=22% Similarity=0.304 Sum_probs=53.1
Q ss_pred cceEEEecCCCCcccccC-ceeeecccCCCCCCCcEEEEECCEEcCC--HHHHHHHHhcCCCCCEEEEEEEECCeE
Q 013014 350 SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDELLLQGIKQPPV 422 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aG-l~~~~~~~~~~L~~GDiIl~vnG~~i~~--~~dl~~~l~~~~~g~~v~l~v~R~g~~ 422 (451)
.|++|.+|.+++||+++| |++ ||+|++|||++|.+ +.++...+.. .|+++.|+|.|+|+.
T Consensus 38 ~~v~V~~V~~~spA~~aG~l~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~--~g~~v~l~v~R~g~~ 100 (104)
T 2djt_A 38 TPLAVRGLLKDGPAQRCGRLEV-----------GDLVLHINGESTQGLTHAQAVERIRA--GGPQLHLVIRRPLSG 100 (104)
T ss_dssp CCCEEEEECTTCHHHHHCSCCT-----------TCBEEEETTEECTTCCHHHHHHHHHH--TCSEEEEEECCCCCC
T ss_pred CCEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEECCCC
Confidence 689999999999999999 999 99999999999988 4677766665 589999999998864
No 220
>2kpk_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; PDZ domain, ATP-binding, cell junction, cell membrane; NMR {Homo sapiens} PDB: 2kpl_A
Probab=98.68 E-value=2.7e-08 Score=85.15 Aligned_cols=61 Identities=25% Similarity=0.365 Sum_probs=55.4
Q ss_pred cceEEEecCCCCcccccC-ceeeecccCCCCCCCcEEEEECCEEcCC--HHHHHHHHhcCCCCCEEEEEEEECCe
Q 013014 350 SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDELLLQGIKQPP 421 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aG-l~~~~~~~~~~L~~GDiIl~vnG~~i~~--~~dl~~~l~~~~~g~~v~l~v~R~g~ 421 (451)
.|++|.+|.+++||+++| |++ ||+|++|||++|.+ +.++.+++....+|++++|+|.|++.
T Consensus 43 ~~v~V~~V~~~spA~~aG~L~~-----------GD~Il~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~~ 106 (129)
T 2kpk_A 43 EFLQIKSLVLDGPAALDGKMET-----------GDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASVDLELCRGYP 106 (129)
T ss_dssp EEEEEEEECTTSHHHHHSSCCT-----------TCEEEEETTEECTTSCHHHHHHHHHHSCTTEEEEEEEEECSC
T ss_pred CCEEEEEECCCChHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEeCCC
Confidence 478999999999999999 999 99999999999985 67999999887679999999999873
No 221
>2eno_A Synaptojanin-2-binding protein; mitochondrial outer membrane protein 25, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.68 E-value=1.6e-08 Score=85.39 Aligned_cols=78 Identities=28% Similarity=0.331 Sum_probs=60.3
Q ss_pred ccccceeccchhhh-hhCccceEEEecCCCCcccccC-ceeeecccCCCCCCCcEEEEECCEEcCCHH--HHHHHHhcCC
Q 013014 332 PILGIKFAPDQSVE-QLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSNGS--DLYRILDQCK 407 (451)
Q Consensus 332 ~~lGi~~~~~~~~~-~~~~~Gv~V~~v~~~s~a~~aG-l~~~~~~~~~~L~~GDiIl~vnG~~i~~~~--dl~~~l~~~~ 407 (451)
..+|+.+....... ..+..|++|.+|.+++||+++| |++ ||+|++|||++|.++. ++..++..
T Consensus 28 ~~lG~~i~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~-----------GD~Il~vng~~v~~~~~~~~~~~~~~-- 94 (120)
T 2eno_A 28 SGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQE-----------GDKILSVNGQDLKNLLHQDAVDLFRN-- 94 (120)
T ss_dssp SSCSEEEECCTTTCSSSSCCSEEEEEECSSSHHHHSCCSCT-----------TCEEEEETTEECCSCCHHHHHHHHHH--
T ss_pred CCCCEEEecccCCccccCCCCEEEEEECCCChHHHCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--
Confidence 46777766421110 0123699999999999999999 999 9999999999999954 77777765
Q ss_pred CCCEEEEEEEECCeE
Q 013014 408 VGDELLLQGIKQPPV 422 (451)
Q Consensus 408 ~g~~v~l~v~R~g~~ 422 (451)
.|++++|+|.|+++.
T Consensus 95 ~g~~v~l~v~R~~~~ 109 (120)
T 2eno_A 95 AGYAVSLRVQHRLQV 109 (120)
T ss_dssp HCSEEEEEEEEEEEC
T ss_pred CCCeEEEEEEeCCcC
Confidence 488999999998764
No 222
>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.67 E-value=2e-09 Score=89.43 Aligned_cols=67 Identities=21% Similarity=0.302 Sum_probs=56.9
Q ss_pred ccceEEEecCCCCcccccC-ceeeecccCCCCCCCcEEEEECCEEcCC--HHHHHHHHhcCCCCCEEEEEEEECCeEEEE
Q 013014 349 VSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDELLLQGIKQPPVLSD 425 (451)
Q Consensus 349 ~~Gv~V~~v~~~s~a~~aG-l~~~~~~~~~~L~~GDiIl~vnG~~i~~--~~dl~~~l~~~~~g~~v~l~v~R~g~~~~~ 425 (451)
..|++|.+|.+++||+++| |++ ||+|++|||++|.+ +.++...+.. .|+.+.|+|.|+++..++
T Consensus 35 ~~gv~V~~V~~~spA~~aG~L~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~--~~~~v~l~v~R~~~~~~~ 101 (110)
T 1um1_A 35 APGLYIQTLLPGSPAAADGRLSL-----------GDRILEVNGSSLLGLGYLRAVDLIRH--GGKKMRFLVAKSDVETAK 101 (110)
T ss_dssp CSSEEEEEECTTSHHHHHSCCCT-----------TCEEEEESSCBCSSCCHHHHHHHHHT--CCSEEEEEEECCCHHHHH
T ss_pred CCCEEEEEECCCChHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEeCCcceeE
Confidence 3689999999999999999 999 99999999999975 5666666654 489999999999987665
Q ss_pred EEE
Q 013014 426 NLR 428 (451)
Q Consensus 426 ~v~ 428 (451)
+++
T Consensus 102 ~v~ 104 (110)
T 1um1_A 102 KIH 104 (110)
T ss_dssp HHS
T ss_pred EEE
Confidence 554
No 223
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=98.67 E-value=2.2e-08 Score=79.80 Aligned_cols=58 Identities=28% Similarity=0.424 Sum_probs=50.6
Q ss_pred cceEEEecCCCCcccccC-ceeeecccCCCCCCCcEEEEECCEEc--CCHHHHHHHHhcCCCCCEEEEEEEECC
Q 013014 350 SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKV--SNGSDLYRILDQCKVGDELLLQGIKQP 420 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aG-l~~~~~~~~~~L~~GDiIl~vnG~~i--~~~~dl~~~l~~~~~g~~v~l~v~R~g 420 (451)
.|++|.+|.+++||+++| |++ ||+|++|||+++ .+++++.+++... ++++.+++.+.-
T Consensus 21 ~gv~V~~V~~gspA~~aG~L~~-----------GD~Il~ing~~v~~~~~~~~~~~i~~~--~~~v~L~v~~~~ 81 (88)
T 3e17_A 21 SQIFVKEMTRTGLATKDGNLHE-----------GDIILKINGTVTENMSLTDARKLIEKS--RGKLQLVVLRDL 81 (88)
T ss_dssp EEEEEEEECTTSHHHHHCCCCT-----------TCEEEEETTEECTTCCHHHHHHHHHHT--TTEEEEEECCC-
T ss_pred CCEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHcC--CCeEEEEEeCCC
Confidence 589999999999999999 999 999999999999 7889999998863 568888877643
No 224
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=98.67 E-value=3.2e-08 Score=79.65 Aligned_cols=72 Identities=25% Similarity=0.396 Sum_probs=56.9
Q ss_pred cccceeccchhhhhhCccceEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEcCCH--HHHHHHHhcCCCCC
Q 013014 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVGD 410 (451)
Q Consensus 333 ~lGi~~~~~~~~~~~~~~Gv~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i~~~--~dl~~~l~~~~~g~ 410 (451)
.+|+.+..... ..|++|..|.++|||+++||++ ||+|++|||+++.++ .++..++.. .++
T Consensus 17 ~~G~~l~~~~~-----~~~~~V~~v~~~spA~~aGl~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~--~~~ 78 (95)
T 3r68_A 17 GYGFYLRAGPE-----QKGQIIKDIEPGSPAEAAGLKN-----------NDLVVAVNGKSVEALDHDGVVEMIRK--GGD 78 (95)
T ss_dssp BCSCEEEEC-------CCSEEEECCCTTSHHHHHTCCT-----------TEEEEEETTEECTTCCHHHHHHHHHT--TTT
T ss_pred cccEEEEecCC-----CCCEEEEEECCCCHHHHCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHh--CCC
Confidence 46666653220 1489999999999999999999 999999999999999 899988876 467
Q ss_pred EEEEEEEECCeE
Q 013014 411 ELLLQGIKQPPV 422 (451)
Q Consensus 411 ~v~l~v~R~g~~ 422 (451)
++.+.+.|.+..
T Consensus 79 ~~~~~~~r~~~~ 90 (95)
T 3r68_A 79 QTTLLVLDKELE 90 (95)
T ss_dssp EEEEEEEECC--
T ss_pred eEEEEEECCccc
Confidence 778887776543
No 225
>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.67 E-value=2.7e-08 Score=81.91 Aligned_cols=76 Identities=25% Similarity=0.363 Sum_probs=59.9
Q ss_pred cccceeccchhhh--hhCccceEEEecCCCCcccccC-ceeeecccCCCCCCCcEEEEECCEEcCC--HHHHHHHHhcCC
Q 013014 333 ILGIKFAPDQSVE--QLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCK 407 (451)
Q Consensus 333 ~lGi~~~~~~~~~--~~~~~Gv~V~~v~~~s~a~~aG-l~~~~~~~~~~L~~GDiIl~vnG~~i~~--~~dl~~~l~~~~ 407 (451)
.+|+.+....... ..+-.|++|.+|.+++||+++| |++ ||+|++|||++|.+ +.++..++..
T Consensus 19 glG~~l~~g~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~-----------GD~I~~vng~~v~~~~~~~~~~~l~~-- 85 (105)
T 1wha_A 19 GLGFSIAGGKGSTPYRAGDAGIFVSRIAEGGAAHRAGTLQV-----------GDRVLSINGVDVTEARHDHAVSLLTA-- 85 (105)
T ss_dssp CCSCEEECCTTSCCSSTTCCSCEEEECCTTSSHHHHSSCCT-----------TCEEEEESSCBCTTCCHHHHHHHHTS--
T ss_pred ccCEEEEeccCCCcccCCCCCEEEEEeCCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--
Confidence 3677765421100 0123689999999999999999 999 99999999999988 7888888865
Q ss_pred CCCEEEEEEEECCe
Q 013014 408 VGDELLLQGIKQPP 421 (451)
Q Consensus 408 ~g~~v~l~v~R~g~ 421 (451)
.|+.++|+|.|+++
T Consensus 86 ~g~~v~l~v~R~~~ 99 (105)
T 1wha_A 86 ASPTIALLLEREAG 99 (105)
T ss_dssp CCSCEEEEEEECCC
T ss_pred CCCeEEEEEEECCC
Confidence 38889999999764
No 226
>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens}
Probab=98.67 E-value=1.9e-08 Score=78.98 Aligned_cols=58 Identities=21% Similarity=0.263 Sum_probs=51.3
Q ss_pred cceEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEcCCH--HHHHHHHhcCCCCCEEEEEEEECC
Q 013014 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVGDELLLQGIKQP 420 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i~~~--~dl~~~l~~~~~g~~v~l~v~R~g 420 (451)
.|++|.+|.+++||+++||++ ||+|++|||+++.++ .++...+.. .++.++++|.|+.
T Consensus 23 ~~~~V~~V~~~spA~~aGl~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~--~~~~v~l~v~R~~ 82 (83)
T 2kv8_A 23 APCVLSCVMRGSPADFVGLRA-----------GDQILAVNEINVKKASHEDVVKLIGK--CSGVLHMVIAEGV 82 (83)
T ss_dssp SSCBCCBCCTTSTTTTTTCCT-----------TCEEEEETTEECSSCCHHHHHHHHTT--CSSCEEEEEECCC
T ss_pred CCeEEEEeCCCChHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHh--CCCeEEEEEEcCC
Confidence 478999999999999999999 999999999999999 788887754 3677999999864
No 227
>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1
Probab=98.67 E-value=2.9e-08 Score=83.60 Aligned_cols=59 Identities=24% Similarity=0.291 Sum_probs=53.7
Q ss_pred cceEEEecCCCCcccccC-ceeeecccCCCCCCCcEEEEECCEEcC--CHHHHHHHHhcCCCCCEEEEEEEECCe
Q 013014 350 SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCKVGDELLLQGIKQPP 421 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aG-l~~~~~~~~~~L~~GDiIl~vnG~~i~--~~~dl~~~l~~~~~g~~v~l~v~R~g~ 421 (451)
.|++|.+|.+++||+++| |++ ||+|++|||++|. +..++...+.. .|++++|+|.|+++
T Consensus 54 ~gv~V~~V~~gspA~~aG~L~~-----------GD~Il~Vng~~v~~~~~~~~~~~l~~--~g~~v~l~v~R~~~ 115 (117)
T 2byg_A 54 NSIYVTKIIDGGAAQKDGRLQV-----------GDRLLMVNNYSLEEVTHEEAVAILKN--TSEVVYLKVGKPTT 115 (117)
T ss_dssp CCEEEEEECTTSHHHHHCCCCT-----------TCEEEEETTEECTTCCHHHHHHHHHT--CCSEEEEEEEEEEE
T ss_pred CCEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEeCCc
Confidence 689999999999999999 999 9999999999999 77888888874 48999999999875
No 228
>2jik_A Synaptojanin-2 binding protein; transmembrane, outer membrane, mitochondria distribution, PDZ, membrane, scaffold, mitochondrion, membrane protein; 1.35A {Homo sapiens} PDB: 2jin_A
Probab=98.66 E-value=3e-08 Score=80.94 Aligned_cols=59 Identities=32% Similarity=0.415 Sum_probs=52.4
Q ss_pred cceEEEecCCCCcccccC-ceeeecccCCCCCCCcEEEEECCEEcCCH--HHHHHHHhcCCCCCEEEEEEEECCe
Q 013014 350 SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVGDELLLQGIKQPP 421 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aG-l~~~~~~~~~~L~~GDiIl~vnG~~i~~~--~dl~~~l~~~~~g~~v~l~v~R~g~ 421 (451)
.|++|.+|.+++||+++| |++ ||+|++|||+++.++ .++...+.. .|+.+.++|.|+++
T Consensus 37 ~gv~V~~V~~~spA~~aG~L~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~--~g~~v~l~v~R~~~ 98 (101)
T 2jik_A 37 SGIYVSRIKENGAAALDGRLQE-----------GDKILSVNGQDLKNLLHQDAVDLFRN--AGYAVSLRVQHRLE 98 (101)
T ss_dssp CCEEEEEECTTSHHHHHCCCCT-----------TCEEEEETTEECSSCCHHHHHHHHHT--CCSEEEEEEEEESC
T ss_pred CCEEEEEECCCCHHHHCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHh--CCCeEEEEEEeCCC
Confidence 689999999999999999 999 999999999999885 677766654 48899999999875
No 229
>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A
Probab=98.66 E-value=1.2e-08 Score=87.20 Aligned_cols=80 Identities=20% Similarity=0.261 Sum_probs=61.8
Q ss_pred ccccceeccchhhhhhCccceEEEecCCCCcccccC-ceeeecccCCCCCCCcEEEEECCEEcCC--HHHHHHHHhcC--
Q 013014 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQC-- 406 (451)
Q Consensus 332 ~~lGi~~~~~~~~~~~~~~Gv~V~~v~~~s~a~~aG-l~~~~~~~~~~L~~GDiIl~vnG~~i~~--~~dl~~~l~~~-- 406 (451)
..||+.+.........+..|++|.+|.+++||+++| |++ ||+|++|||+.+.+ +.++.++|...
T Consensus 37 ~glG~~i~~~~~~~~~~~~gi~V~~V~~gspA~~aG~L~~-----------GD~Il~Vng~~v~~~~~~~~~~~l~~~~~ 105 (127)
T 1wg6_A 37 AGLGVSLKGNKSRETGTDLGIFIKSIIHGGAAFKDGRLRM-----------NDQLIAVNGETLLGKSNHEAMETLRRSMS 105 (127)
T ss_dssp TCCCCEEEEEEETTTTEEEEEEEEECCSSSSTHHHHTSCS-----------CCBEEEETTEESTTSCHHHHHHHHHHHHH
T ss_pred CccCeEEecccCCCCCCCCCEEEEEECCCCHHHHCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHHhhc
Confidence 456776654221111112589999999999999999 999 99999999999988 56888888754
Q ss_pred ---CCCCEEEEEEEECCeE
Q 013014 407 ---KVGDELLLQGIKQPPV 422 (451)
Q Consensus 407 ---~~g~~v~l~v~R~g~~ 422 (451)
++|++|+|+|.|+++.
T Consensus 106 ~~g~~~~~v~l~v~R~~~~ 124 (127)
T 1wg6_A 106 MEGNIRGMIQLVILRRSGP 124 (127)
T ss_dssp HHHHHTCEEEEEEEECSCS
T ss_pred cccCCCCEEEEEEEeCCCC
Confidence 3589999999998753
No 230
>3mmg_A Nuclear inclusion protein A; 3C-type protease, TEV, TVMV, viral protein, hydrolase; 1.70A {Tobacco vein mottling virus} SCOP: b.47.1.0
Probab=98.65 E-value=1.8e-06 Score=80.49 Aligned_cols=163 Identities=14% Similarity=0.250 Sum_probs=105.7
Q ss_pred hCCceEEEEeeeeccCccccccccccCeEEEEEEEcCCCeEEecccccCCC-CcEEEEeCCCcEEEEE----EEEEcCCC
Q 013014 125 NTPSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKGHVVTNYHVIRGA-SDIRVTFADQSAYDAK----IVGFDQDK 199 (451)
Q Consensus 125 ~~~SVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHVv~~~-~~i~V~~~dg~~~~a~----vv~~d~~~ 199 (451)
+...|+.++..+.+. ...--|+..+ .||+|++|.+... ..++|+...|.-.-.. -+..-+..
T Consensus 14 ia~~iC~l~n~sdg~-----------~~~l~gigyG--~~iItn~HLf~rnng~L~I~s~hG~f~v~nt~~lki~~i~g~ 80 (241)
T 3mmg_A 14 ISACVCLLENSSDGH-----------SERLFGIGFG--PYIIANQHLFRRNNGELTIKTMHGEFAVANSTQLQMKPVEGR 80 (241)
T ss_dssp HHTTEEEEEEEETTE-----------EEEEEEEEET--TEEEECGGGGSSTTCEEEEEETTEEEEEEEGGGSCEEECTBS
T ss_pred hhheEEEEEEEeCCC-----------EEEEEEEeEC--CEEEEChhhcccCCCeEEEEECCceEEccCCCceeeEEeCCc
Confidence 345577776543221 1233466664 4999999999865 4688988877432111 34556788
Q ss_pred CEEEEEEcCCCCCCcceecCC-CCCCCCCcEEEEeeCCCCCCCceEEeEEeeeeeeeccCCCCCCcccEEEEcccCCCCC
Q 013014 200 DVAVLRIDAPKDKLRPIPIGV-SADLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGN 278 (451)
Q Consensus 200 DlAlLkv~~~~~~~~~l~l~~-s~~~~~G~~V~~iG~p~g~~~~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~ 278 (451)
||.++|+.. ++||.+-.. -..++.||.|+++|..+...... ..|+........ . ...+-........|+
T Consensus 81 DiiiIrmPk---DfpPf~~kl~FR~P~~~E~V~lVg~~fq~k~~~--s~vSesS~i~p~--~---~~~fWkHwIsT~~G~ 150 (241)
T 3mmg_A 81 DIIVIKMAK---DFPPFPQKLKFRQPTIKDRVCMVSTNFQQKSVS--SLVSESSHIVHK--E---DTSFWQHWITTKDGQ 150 (241)
T ss_dssp SCEEEECCT---TSCCCCSCCCBCCCCTTCCEEEEEEEECSSCEE--EEEEEEECCEEC--T---TSSEEEECBCCCTTC
T ss_pred cEEEEeCCC---CCCCcchhcccCCCCCCCeEEEEEeecccCCcc--EEECCcceeEEc--C---CCCEEEEEcCCCCCc
Confidence 999999953 566665422 25688999999999765543322 223322111111 1 135667778888999
Q ss_pred CCCceeCC-CceEEEEEeeeeCCCCCccceeEEEecc
Q 013014 279 SGGPLLDS-SGSLIGINTAIYSPSGASSGVGFSIPVD 314 (451)
Q Consensus 279 SGGPlvd~-~G~VVGI~s~~~~~~~~~~~~~~aIP~~ 314 (451)
-|+|+++. +|++|||++..... ...+|+.|+.
T Consensus 151 CGlPlVs~~Dg~IVGiHsl~~~~----~~~N~F~~f~ 183 (241)
T 3mmg_A 151 AGSPLVSIIDGNILGIHSLTHTT----NGSNYFVEFP 183 (241)
T ss_dssp TTCEEEETTTCCEEEEEEEEETT----TCCEEEEECC
T ss_pred CCCeEEEcCCCcEEEEEecccCC----CCcEEEEcCC
Confidence 99999995 99999999987543 2367888773
No 231
>3cbz_A Dishevelled-2; PDZ domain, phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, WNT signaling pathway; 1.38A {Homo sapiens} PDB: 3cby_A 3cc0_A 3cbx_A 2rey_A 2f0a_A 1l6o_A 3fy5_A 2kaw_A* 1mc7_A
Probab=98.64 E-value=3e-08 Score=82.19 Aligned_cols=62 Identities=21% Similarity=0.306 Sum_probs=53.7
Q ss_pred cceEEEecCCCCcccccC-ceeeecccCCCCCCCcEEEEECCEEcCC--HHHHHHHHhcCC-CCCEEEEEEEECCeE
Q 013014 350 SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCK-VGDELLLQGIKQPPV 422 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aG-l~~~~~~~~~~L~~GDiIl~vnG~~i~~--~~dl~~~l~~~~-~g~~v~l~v~R~g~~ 422 (451)
.|++|.+|.+++||+++| |++ ||+|++|||+++.+ +.++.+++.... .++.++|+|.|+++.
T Consensus 33 ~gv~V~~V~~~spA~~aG~L~~-----------GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~~~v~l~v~R~~~~ 98 (108)
T 3cbz_A 33 GGIYIGSIMKGGAVAADGRIEP-----------GDMLLQVNDMNFENMSNDDAVRVLRDIVHKPGPIVLTVAKSGGG 98 (108)
T ss_dssp CEEEEEEECTTSHHHHHCCCCT-----------TCEEEEETTEETTSCCHHHHHHHHHHHHTSSSCEEEEEECCCC-
T ss_pred CCEEEEEECCCChHHhcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhcccCCCeEEEEEEeCCCC
Confidence 689999999999999999 999 99999999999999 889999887651 234599999997754
No 232
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=98.64 E-value=2.1e-08 Score=83.01 Aligned_cols=58 Identities=19% Similarity=0.255 Sum_probs=47.9
Q ss_pred cceEEEecCCCCcccccC-ceeeecccCCCCCCCcEEEEECCEEcCCHH--HHHHHHhcCCCCCEEEEEEEECC
Q 013014 350 SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSNGS--DLYRILDQCKVGDELLLQGIKQP 420 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aG-l~~~~~~~~~~L~~GDiIl~vnG~~i~~~~--dl~~~l~~~~~g~~v~l~v~R~g 420 (451)
.|++|.+|.+++||+++| |++ ||+|++|||++|.+.. +....+. ..++++.++|.|..
T Consensus 25 ~gv~V~~V~~gspA~~aG~L~~-----------GD~Il~Ing~~v~~~~~~~~~~~~~--~~~~~v~l~v~R~~ 85 (106)
T 2la8_A 25 IGCTIADLIQGQYPEIDSKLQR-----------GDIITKFNGDALEGLPFQVCYALFK--GANGKVSMEVTRPK 85 (106)
T ss_dssp SSEEEEECCTTSCHHHHTTCCT-----------TCEEEEESSCBCSSSCHHHHHHHHH--SCBSCEEEEEEECC
T ss_pred CCEEEEEECCCCHHHHCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHh--CCCCeEEEEEEeCC
Confidence 689999999999999999 999 9999999999998743 3344443 35677999999864
No 233
>1v62_A KIAA1719 protein; structural genomics, synaptic transmission, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.64 E-value=2.4e-08 Score=83.97 Aligned_cols=60 Identities=20% Similarity=0.355 Sum_probs=54.6
Q ss_pred cceEEEecCCCCcccccC-ceeeecccCCCCCCCcEEEEECCEEc--CCHHHHHHHHhcCCCCCEEEEEEEECCeE
Q 013014 350 SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKV--SNGSDLYRILDQCKVGDELLLQGIKQPPV 422 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aG-l~~~~~~~~~~L~~GDiIl~vnG~~i--~~~~dl~~~l~~~~~g~~v~l~v~R~g~~ 422 (451)
.+++|.+|.+++||+++| |++ ||+|++|||++| .+++++.+++.. .|+.++|+|.|+++.
T Consensus 42 ~~~~V~~V~~~spA~~aG~l~~-----------GD~Il~Ing~~v~~~~~~~~~~~l~~--~g~~v~l~v~r~~~~ 104 (117)
T 1v62_A 42 SVITIDRIKPASVVDRSGALHP-----------GDHILSIDGTSMEHCSLLEATKLLAS--ISEKVRLEILPVPQS 104 (117)
T ss_dssp CEEEEEECCTTSHHHHHTCCCT-----------TCBEEEETTEETTSCCHHHHHHHHHS--CSSEEEEEECCBTTB
T ss_pred CCEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHh--CCCeEEEEEEECCCC
Confidence 349999999999999999 999 999999999999 779999999984 689999999998864
No 234
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=98.64 E-value=4.4e-08 Score=79.23 Aligned_cols=57 Identities=32% Similarity=0.438 Sum_probs=51.8
Q ss_pred cceEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEcCC--HHHHHHHHhcCCCCCEEEEEEEEC
Q 013014 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDELLLQGIKQ 419 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i~~--~~dl~~~l~~~~~g~~v~l~v~R~ 419 (451)
.|++|.+|.+++||+++||++ ||+|++|||++|.+ ++++.+++... ++++.++|.|.
T Consensus 37 ~~~~V~~V~~~spA~~aGL~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~~--~~~v~l~v~~~ 95 (96)
T 2ego_A 37 MVTFVARVHESSPAQLAGLTP-----------GDTIASVNGLNVEGIRHREIVDIIKAS--GNVLRLETLYG 95 (96)
T ss_dssp EEEEEEEECTTCHHHHTTCCT-----------TCEEEEETTEECTTCCHHHHHHHHHHT--TTEEEEEEECC
T ss_pred CCeEEEEECCCChHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhC--CCeEEEEEEEC
Confidence 589999999999999999999 99999999999999 58999998874 56999999875
No 235
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=98.64 E-value=4.3e-08 Score=78.09 Aligned_cols=72 Identities=19% Similarity=0.288 Sum_probs=60.2
Q ss_pred ccccceeccchhhhhhCccceEEEecCCCCcccc-cCceeeecccCCCCCCCcEEEEECCEEcC--CHHHHHHHHhcCCC
Q 013014 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGK-AGLLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCKV 408 (451)
Q Consensus 332 ~~lGi~~~~~~~~~~~~~~Gv~V~~v~~~s~a~~-aGl~~~~~~~~~~L~~GDiIl~vnG~~i~--~~~dl~~~l~~~~~ 408 (451)
..+|+.+.... ..+++|.+|.+++||++ +||++ ||+|++|||+++. +++++.+++... +
T Consensus 13 ~~lG~~i~~~~------~~~~~I~~V~~gspA~~~agL~~-----------GD~I~~Ing~~v~~~~~~~~~~~l~~~-~ 74 (88)
T 1kwa_A 13 EPMGITLKMNE------LNHCIVARIMHGGMIHRQGTLHV-----------GDEIREINGISVANQTVEQLQKMLREM-R 74 (88)
T ss_dssp SCCCEEEECSC------GGGEEEEEECTTSHHHHHTCCCT-----------TCEEEEETTEEGGGSCHHHHHHHHHHC-C
T ss_pred CceeEEEEeCC------CCCEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHhcC-C
Confidence 35677776521 14789999999999999 88999 9999999999999 999999999875 4
Q ss_pred CCEEEEEEEECCeE
Q 013014 409 GDELLLQGIKQPPV 422 (451)
Q Consensus 409 g~~v~l~v~R~g~~ 422 (451)
+ +++++|.|+++.
T Consensus 75 ~-~v~l~v~r~~~~ 87 (88)
T 1kwa_A 75 G-SITFKIVPSYRE 87 (88)
T ss_dssp E-EEEEEEECCCCC
T ss_pred C-cEEEEEECCcCC
Confidence 5 899999998753
No 236
>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A
Probab=98.63 E-value=1.5e-08 Score=85.81 Aligned_cols=63 Identities=17% Similarity=0.273 Sum_probs=54.2
Q ss_pred cceEEEecCCCCccccc-CceeeecccCCCCCCCcEEEEECCEEcCC--HHHHHHHHhcCCCCCEEEEEEEECCeEEEE
Q 013014 350 SGVLVLDAPPNGPAGKA-GLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDELLLQGIKQPPVLSD 425 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~a-Gl~~~~~~~~~~L~~GDiIl~vnG~~i~~--~~dl~~~l~~~~~g~~v~l~v~R~g~~~~~ 425 (451)
.|++|.+|.+++||+++ ||++ ||+|++|||+++.+ +.++..++.. .+++++|+|.|+|+..++
T Consensus 53 ~~~~V~~V~~~spA~~aggL~~-----------GD~Il~VnG~~v~~~~~~~~~~~l~~--~~~~v~l~v~r~g~~~~~ 118 (120)
T 2iwo_A 53 VPIFIAMMHPTGVAAQTQKLRV-----------GDRIVTICGTSTEGMTHTQAVNLLKN--ASGSIEMQVVAGGDVSET 118 (120)
T ss_dssp EEEEEEEECTTSHHHHHTCCCT-----------TCEEEEETTEECTTCBHHHHHHHHHH--CCSEEEEEEECCTTSSSC
T ss_pred CCEEEEEECCCCHHHHhCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEECCcccee
Confidence 58999999999999999 9999 99999999999987 5677777765 477899999999876543
No 237
>2ejy_A 55 kDa erythrocyte membrane protein; GPC, maguk, PDZ, membrane protein; NMR {Homo sapiens} PDB: 2ev8_A
Probab=98.63 E-value=2.7e-08 Score=80.98 Aligned_cols=68 Identities=24% Similarity=0.318 Sum_probs=56.6
Q ss_pred cccceeccchhhhhhCccceEEEecCCCCcccccC-ceeeecccCCCCCCCcEEEEECCEEcCC--HHHHHHHHhcCCCC
Q 013014 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVG 409 (451)
Q Consensus 333 ~lGi~~~~~~~~~~~~~~Gv~V~~v~~~s~a~~aG-l~~~~~~~~~~L~~GDiIl~vnG~~i~~--~~dl~~~l~~~~~g 409 (451)
.||+.+.... -.|++|.+|.+++||+++| |++ ||+|++|||++|.+ ++|+.+++... +
T Consensus 25 ~lG~~l~~~~------~~gv~V~~V~~gspA~~aG~L~~-----------GD~Il~ING~~v~~~~~~~~~~~l~~~--~ 85 (97)
T 2ejy_A 25 PMGICLKLNE------KQSCTVARILHGGMIHRQGSLHV-----------GDEILEINGTNVTNHSVDQLQKAMKET--K 85 (97)
T ss_dssp CCSEEEEECT------TCCEEEEEECSSSHHHHHTCCCT-----------TCEEEEETTBCCCSSCSHHHHHHHHHC--C
T ss_pred CeeEEEEeCC------CCCEEEEEeCCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHcC--C
Confidence 4566665321 1589999999999999999 999 99999999999996 89999999863 6
Q ss_pred CEEEEEEEEC
Q 013014 410 DELLLQGIKQ 419 (451)
Q Consensus 410 ~~v~l~v~R~ 419 (451)
++++++|.+.
T Consensus 86 ~~v~L~V~~~ 95 (97)
T 2ejy_A 86 GMISLKVIPN 95 (97)
T ss_dssp EEEEEEEECC
T ss_pred CeEEEEEEEC
Confidence 7888988865
No 238
>1whd_A RGS3, regulator of G-protein signaling 3; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.63 E-value=3.9e-08 Score=80.22 Aligned_cols=59 Identities=25% Similarity=0.309 Sum_probs=51.8
Q ss_pred cceEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEcCC--HHHHHHHHhcCCCCCEEEEEEEECCe
Q 013014 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDELLLQGIKQPP 421 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i~~--~~dl~~~l~~~~~g~~v~l~v~R~g~ 421 (451)
.|++|.+|.+++||+++||++ ||+|++|||++|.+ +.++..++.. .++++.++|.|++.
T Consensus 36 ~~~~V~~V~~~spA~~aGL~~-----------GD~I~~vng~~v~~~~~~~~~~~l~~--~~~~v~l~v~R~~~ 96 (100)
T 1whd_A 36 SPVRVQAVDSGGPAERAGLQQ-----------LDTVLQLNERPVEHWKCVELAHEIRS--CPSEIILLVWRVSG 96 (100)
T ss_dssp SSCBCCBCCTTSHHHHHTCCS-----------SCEEEEETTEECTTCCHHHHHHHHHH--CSSEEEEEEEECCS
T ss_pred CCEEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEECCC
Confidence 578999999999999999999 99999999999995 5888888876 35679999999864
No 239
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=98.63 E-value=4.2e-08 Score=78.35 Aligned_cols=73 Identities=26% Similarity=0.363 Sum_probs=55.5
Q ss_pred cccceeccchhhhhhCccceEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEcCC--HHHHHHHHhcCCCCC
Q 013014 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGD 410 (451)
Q Consensus 333 ~lGi~~~~~~~~~~~~~~Gv~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i~~--~~dl~~~l~~~~~g~ 410 (451)
.+|+.+.... +..|++|.+|.++|||+++||++ ||+|++|||+++.+ ..++...+... .++
T Consensus 15 g~G~~~~~~~-----~~~g~~V~~V~~~spA~~aGL~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~~-~~~ 77 (91)
T 1g9o_A 15 GYGFHLHGEK-----GKLGQYIRLVEPGSPAEKAGLLA-----------GDRLVEVNGENVEKETHQQVVSRIRAA-LNA 77 (91)
T ss_dssp BCCEEEEECT-----TCSSEEEEEECTTSHHHHTTCCT-----------TCEEEEETTEECTTCCHHHHHHHHHTC-SSE
T ss_pred cccEEEEecC-----CCCCEEEEEECCCCHHHHCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHcC-CCc
Confidence 3566654321 12589999999999999999999 99999999999998 67888877753 455
Q ss_pred EEEEEEEECCeE
Q 013014 411 ELLLQGIKQPPV 422 (451)
Q Consensus 411 ~v~l~v~R~g~~ 422 (451)
.+.+.+.|++++
T Consensus 78 ~~~~~~~r~~~~ 89 (91)
T 1g9o_A 78 VRLLVVDPETDE 89 (91)
T ss_dssp EEEEEECCCCSC
T ss_pred EEEEEEcCCccc
Confidence 555666666653
No 240
>1q7x_A PDZ2B domain of PTP-BAS (HPTP1E); phosphatase, structural proteomics in europe, spine, structural genomics, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.62 E-value=3.4e-08 Score=81.63 Aligned_cols=61 Identities=25% Similarity=0.334 Sum_probs=54.6
Q ss_pred cceEEEecCCCCcccccC-ceeeecccCCCCCCCcEEEEECCEEcC--CHHHHHHHHhcCCCCCEEEEEEEECCeEE
Q 013014 350 SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCKVGDELLLQGIKQPPVL 423 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aG-l~~~~~~~~~~L~~GDiIl~vnG~~i~--~~~dl~~~l~~~~~g~~v~l~v~R~g~~~ 423 (451)
.|++|.+|.+++||+++| |++ ||+|++|||+++. ++.++...+.. .|+++.++|.|+++..
T Consensus 42 ~gv~V~~V~~~spA~~aG~L~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~--~g~~v~l~v~R~~~~~ 105 (108)
T 1q7x_A 42 GGIYVKAVIPQGAAESDGRIHK-----------GDRVLAVNGVSLEGATHKQAVETLRN--TGQVVHLLLEKGQSPT 105 (108)
T ss_dssp CCCBEEEECTTSTHHHHTCCCS-----------SCEEEEETTEECBSCTTSHHHHHHHH--TTSEEEEEEECCCCSC
T ss_pred CCEEEEEECCCChHHHCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEeCCccC
Confidence 689999999999999999 999 9999999999999 66788887775 4899999999988643
No 241
>3axa_A Afadin, nectin-3, protein AF-6; PDZ domain, fusion protein, cell adhesion; 2.78A {Mus musculus} PDB: 1xz9_A 2exg_A* 1t2m_A 2ain_A
Probab=98.62 E-value=4.6e-08 Score=80.57 Aligned_cols=60 Identities=23% Similarity=0.371 Sum_probs=53.0
Q ss_pred cceEEEecCCCCcccccC-ceeeecccCCCCCCCcEEEEECCEEcCC--HHHHHHHHhcCCCCCEEEEEEEECCeE
Q 013014 350 SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDELLLQGIKQPPV 422 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aG-l~~~~~~~~~~L~~GDiIl~vnG~~i~~--~~dl~~~l~~~~~g~~v~l~v~R~g~~ 422 (451)
.|++|.+|.+++||+++| |++ ||+|++|||+++.+ +.++...+.. .|+++.++|.|+|+.
T Consensus 38 ~gv~V~~V~~~spA~~aG~L~~-----------GD~I~~ing~~v~~~~~~~~~~~~~~--~g~~v~l~v~R~~~~ 100 (106)
T 3axa_A 38 LGIYVKSVVKGGAADVDGRLAA-----------GDQLLSVDGRSLVGLSQERAAELMTR--TSSVVTLEVAKQGAI 100 (106)
T ss_dssp EEEEEEEEBTTSHHHHHCCCCT-----------TCEEEEETTEECTTCCHHHHHHHHHT--CCSEEEEEEECCCSS
T ss_pred CCEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEeCCcc
Confidence 689999999999999999 999 99999999999985 6677766654 689999999998864
No 242
>2kjd_A Sodium/hydrogen exchange regulatory cofactor NHE- RF1; PDZ domain, protein, acetylation, cell projection, disease mutation, membrane; NMR {Homo sapiens}
Probab=98.62 E-value=1.8e-08 Score=85.90 Aligned_cols=68 Identities=21% Similarity=0.250 Sum_probs=60.8
Q ss_pred cceEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEcCC--HHHHHHHHhcCCCCCEEEEEEEECCeEEE--E
Q 013014 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDELLLQGIKQPPVLS--D 425 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i~~--~~dl~~~l~~~~~g~~v~l~v~R~g~~~~--~ 425 (451)
.|++|.+|.+++||+++||++ ||+|++|||++|.+ +.++..++... .|+.+.++|.|+|+..+ +
T Consensus 33 ~gv~V~~V~~~spA~~aGl~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~~-~~~~~~l~v~R~g~~~~~~~ 100 (128)
T 2kjd_A 33 PGQFIRSVDPDSPAEASGLRA-----------QDRIVEVNGVCMEGKQHGDVVSAIRAG-GDETKLLVVDRETDEFFKKC 100 (128)
T ss_dssp CSEEEEEECTTSHHHHHTCCT-----------TCEEEEETTEECTTCCHHHHHHHHHTT-CSEEEEEEECHHHHHHHHHH
T ss_pred CCEEEEEeCCCChHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhC-CCCEEEEEEEeCCcceEEEE
Confidence 589999999999999999999 99999999999999 99999999875 78889999999998766 4
Q ss_pred EEEe
Q 013014 426 NLRL 429 (451)
Q Consensus 426 ~v~l 429 (451)
++++
T Consensus 101 ~l~~ 104 (128)
T 2kjd_A 101 RVIP 104 (128)
T ss_dssp TCCC
T ss_pred EEEe
Confidence 4443
No 243
>2vsv_A Rhophilin-2; scaffold protein, RHO GTPase binding, protein-binding, RHOB, nitration, cytoplasm, PDZ domain, CAsp8; 1.82A {Homo sapiens}
Probab=98.61 E-value=5.9e-08 Score=80.70 Aligned_cols=60 Identities=23% Similarity=0.204 Sum_probs=51.5
Q ss_pred cceEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEcC--CHHHHHHHHhcCCCCCEEEEEEEECCe
Q 013014 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCKVGDELLLQGIKQPP 421 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i~--~~~dl~~~l~~~~~g~~v~l~v~R~g~ 421 (451)
.+++|.+|.+++||+++||++ ||+|++|||++|. ++.|+.+++.. ..+++++++|.|...
T Consensus 44 ~~v~V~~V~~gspA~~AGL~~-----------GD~Il~VnG~~v~~~~~~dv~~~i~~-~~~~~v~l~V~~~~~ 105 (109)
T 2vsv_A 44 APVQVHFLDPYCSASVAGARE-----------GDYIVSIQLVDCKWLTLSEVMKLLKS-FGEDEIEMKVVSLLD 105 (109)
T ss_dssp SSCEEEEECTTSHHHHTTCCT-----------TCEEEEETTEECTTCCHHHHHHHHHT-TTTSCEEEEEESCC-
T ss_pred CCeEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHh-CCCCeEEEEEEECCC
Confidence 578999999999999999999 9999999999999 66899988875 345569999988654
No 244
>3qe1_A Sorting nexin-27, G protein-activated inward RECT potassium channel 3 chimera; PDZ domain, PDZ binding, GIRK3 regulation, early endosomes; 1.68A {Rattus norvegicus} SCOP: b.36.1.0 PDB: 3qdo_A 3qgl_A
Probab=98.61 E-value=3.8e-08 Score=81.14 Aligned_cols=60 Identities=27% Similarity=0.340 Sum_probs=53.7
Q ss_pred cceEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEcC--CHHHHHHHHhcCCCCCEEEEEEEECCeE
Q 013014 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCKVGDELLLQGIKQPPV 422 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i~--~~~dl~~~l~~~~~g~~v~l~v~R~g~~ 422 (451)
.+++|.+|.+++||+++||++ ||+|++|||++|. ++.++..++.. .|+.+.++|.|.+.+
T Consensus 43 p~~~V~~v~~~spA~~aGl~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~--~g~~v~l~v~r~~~~ 104 (107)
T 3qe1_A 43 PLQHVSAVLPGGAADRAGVRK-----------GDRILEVNGVNVEGATHKQVVDLIRA--GEKELILTVLSVESE 104 (107)
T ss_dssp CCEEEEEECTTSHHHHHTCCT-----------TCEEEEETTEECTTCCHHHHHHHHHH--CSSEEEEEEECSSCC
T ss_pred CceEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCEEEEEEEcCCCC
Confidence 456799999999999999999 9999999999999 78999998875 589999999997654
No 245
>2dm8_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.61 E-value=3.2e-08 Score=82.82 Aligned_cols=76 Identities=21% Similarity=0.340 Sum_probs=60.1
Q ss_pred ccccceeccchhhhhhCccceEEEecCCCCcccccC-ceeeecccCCCCCCCcEEEEECCEEcCC--HHHHHHHHhcCCC
Q 013014 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKV 408 (451)
Q Consensus 332 ~~lGi~~~~~~~~~~~~~~Gv~V~~v~~~s~a~~aG-l~~~~~~~~~~L~~GDiIl~vnG~~i~~--~~dl~~~l~~~~~ 408 (451)
..+|+.+...... ...|++|.+|.+++||+++| |++ ||+|++|||++|.+ +.++..++.. .
T Consensus 28 ~glG~~l~~~~~~---~~~gv~V~~V~~~spA~~aG~L~~-----------GD~I~~vng~~v~~~~~~~~~~~l~~--~ 91 (116)
T 2dm8_A 28 SGLGLSIVGGKDT---PLNAIVIHEVYEEGAAARDGRLWA-----------GDQILEVNGVDLRNSSHEEAITALRQ--T 91 (116)
T ss_dssp SCCCCCCBCCTTS---SCSSEECCCCCSSSHHHHHTCCCT-----------TCEEEEETTEECSSSCHHHHHHHHHT--C
T ss_pred CcccEEEeCCCCC---CcCCEEEEEECCCChHHhCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHh--C
Confidence 3567766532110 12589999999999999999 999 99999999999988 6788877765 3
Q ss_pred CCEEEEEEEECCeEE
Q 013014 409 GDELLLQGIKQPPVL 423 (451)
Q Consensus 409 g~~v~l~v~R~g~~~ 423 (451)
++.+.|+|.|+++..
T Consensus 92 ~~~v~l~v~R~~~~~ 106 (116)
T 2dm8_A 92 PQKVRLVVYRDEAHY 106 (116)
T ss_dssp CSEEEEEEECCSSCC
T ss_pred CCeEEEEEEeCCccc
Confidence 589999999998754
No 246
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=98.61 E-value=5.5e-08 Score=77.87 Aligned_cols=71 Identities=28% Similarity=0.358 Sum_probs=56.6
Q ss_pred cccceeccchhhhhhCccceEEEecCCCCcccccC-ceeeecccCCCCCCCcEEEEECCEEcCCH--HHHHHHHhcCCCC
Q 013014 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVG 409 (451)
Q Consensus 333 ~lGi~~~~~~~~~~~~~~Gv~V~~v~~~s~a~~aG-l~~~~~~~~~~L~~GDiIl~vnG~~i~~~--~dl~~~l~~~~~g 409 (451)
.+|+.+.... +..|++|.+|.++|||+++| |++ ||+|++|||+++.+. .++...+.. .+
T Consensus 17 ~lG~~~~~~~-----~~~gv~V~~V~~~spA~~aG~L~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~--~~ 78 (92)
T 2qg1_A 17 GLGLSIVGKR-----NDTGVFVSDIVKGGIADADGRLMQ-----------GDQILMVNGEDVRNATQEAVAALLKC--SL 78 (92)
T ss_dssp CCSEEEECCS-----SSCSCEEEEECTTSHHHHHTCCCT-----------TCEEEEETTEECTTCCHHHHHHHHHH--CC
T ss_pred cccEEEEecc-----CCCCEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CC
Confidence 4566664321 12689999999999999999 999 999999999999874 566666654 57
Q ss_pred CEEEEEEEECCe
Q 013014 410 DELLLQGIKQPP 421 (451)
Q Consensus 410 ~~v~l~v~R~g~ 421 (451)
++++++|.|.+.
T Consensus 79 ~~v~l~v~R~~~ 90 (92)
T 2qg1_A 79 GTVTLEVGRIST 90 (92)
T ss_dssp SEEEEEEECCCC
T ss_pred CeEEEEEEcccc
Confidence 899999999864
No 247
>1y7n_A Amyloid beta A4 precursor protein-binding family A member 1; copper chaperone for superoxide dismutase, neuronal adaptor, protein transport; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.60 E-value=5.8e-08 Score=77.82 Aligned_cols=55 Identities=22% Similarity=0.400 Sum_probs=49.8
Q ss_pred ceEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEc--CCHHHHHHHHhcCCCCCEEEEEEEEC
Q 013014 351 GVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKV--SNGSDLYRILDQCKVGDELLLQGIKQ 419 (451)
Q Consensus 351 Gv~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i--~~~~dl~~~l~~~~~g~~v~l~v~R~ 419 (451)
| +|.+|.++|||+++||++ ||+|++|||++| .++.++.+++.. .|+++.++|.+.
T Consensus 33 G-~V~~V~~~spA~~aGL~~-----------GD~Il~Ing~~v~~~~~~~~~~~l~~--~g~~v~l~v~p~ 89 (90)
T 1y7n_A 33 G-IICSLMRGGIAERGGVRV-----------GHRIIEINGQSVVATPHEKIVHILSN--AVGEIHMKTMPA 89 (90)
T ss_dssp T-EEEEECTTSHHHHHTCCS-----------SCEEEEETTEECTTSCHHHHHHHHHH--CCEEEEEEEECC
T ss_pred C-EEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEEC
Confidence 5 899999999999999999 999999999999 589999999975 488999998864
No 248
>3i4w_A Disks large homolog 4; alpha and beta protein, alternative splicing, cell junction, cell membrane, lipoprotein, membrane, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.36.1.1 PDB: 3k82_A* 3jxt_A* 2he2_A 1pdr_A 2i0i_A
Probab=98.59 E-value=3.3e-08 Score=80.99 Aligned_cols=59 Identities=29% Similarity=0.434 Sum_probs=50.1
Q ss_pred cceEEEecCCCCcccccC-ceeeecccCCCCCCCcEEEEECCEEcCCH--HHHHHHHhcCCCCCEEEEEEEECCe
Q 013014 350 SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVGDELLLQGIKQPP 421 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aG-l~~~~~~~~~~L~~GDiIl~vnG~~i~~~--~dl~~~l~~~~~g~~v~l~v~R~g~ 421 (451)
.|++|.+|.++|||+++| |++ ||+|++|||+++.++ .++...+.. .++++.++|.|+++
T Consensus 35 ~gv~V~~V~~~spA~~aG~l~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~--~~~~v~l~v~r~~~ 96 (104)
T 3i4w_A 35 EGIFISFILAGGPADLSGELRK-----------GDQILSVNGVDLRNASHEQAAIALKN--AGQTVTIIAQYKPE 96 (104)
T ss_dssp CCEEEEEECTTSHHHHHCCCCT-----------TEEEEEETTEECTTCCHHHHHHHHHT--SCSEEEEEEEECHH
T ss_pred CCEEEEEECCCChHHhcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEECcc
Confidence 489999999999999999 999 999999999999654 455555543 68999999999864
No 249
>2g5m_B Neurabin-2; spinophilin, PDZ domain, CNS, synaptic transmission, protein binding; NMR {Rattus norvegicus}
Probab=98.59 E-value=1.3e-08 Score=85.00 Aligned_cols=66 Identities=17% Similarity=0.264 Sum_probs=56.5
Q ss_pred cceEEEecCCCCcccccC-ceeeecccCCCCCCCcEEEEECCEEcCC--HHHHHHHHhcCCCCCEEEEEEEECCeEEEEE
Q 013014 350 SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDELLLQGIKQPPVLSDN 426 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aG-l~~~~~~~~~~L~~GDiIl~vnG~~i~~--~~dl~~~l~~~~~g~~v~l~v~R~g~~~~~~ 426 (451)
.|++|.+|.++|||+++| |++ ||+|++|||+++.+ +.++..++.. .|+.+.++|.|+++..+++
T Consensus 35 ~g~~V~~V~~~s~A~~aG~l~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~--~g~~v~l~v~R~~~~~~~~ 101 (113)
T 2g5m_B 35 LGIFVKTVTEGGAAHRDGRIQV-----------NDLLVEVDGTSLVGVTQSFAASVLRN--TKGRVRFMIGRERPGEQSE 101 (113)
T ss_dssp EEEEEEECCTTSHHHHHTCSCT-----------TCBEEEETTEECSSCCHHHHHHHHHH--SCSSCEEEEEECCCCTTSS
T ss_pred CCEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHhc--CCCeEEEEEEeCCCCCcch
Confidence 699999999999999999 999 99999999999986 5666666665 4899999999999866555
Q ss_pred EE
Q 013014 427 LR 428 (451)
Q Consensus 427 v~ 428 (451)
+.
T Consensus 102 v~ 103 (113)
T 2g5m_B 102 VA 103 (113)
T ss_dssp CS
T ss_pred hh
Confidence 43
No 250
>2yuy_A RHO GTPase activating protein 21; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.59 E-value=1.6e-08 Score=86.20 Aligned_cols=59 Identities=29% Similarity=0.410 Sum_probs=54.7
Q ss_pred cceEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEcC--CHHHHHHHHhcCCCCCEEEEEEEECCe
Q 013014 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCKVGDELLLQGIKQPP 421 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i~--~~~dl~~~l~~~~~g~~v~l~v~R~g~ 421 (451)
.|++|..|.+++||+++||++ ||+|++|||++|. ++.++.+++.. .|+++.|+|.|+++
T Consensus 61 ~gv~V~~V~~~spA~~aGL~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~--~g~~v~l~v~r~~~ 121 (126)
T 2yuy_A 61 DTIFVKQVKEGGPAFEAGLCT-----------GDRIIKVNGESVIGKTYSQVIALIQN--SDTTLELSVMPKDS 121 (126)
T ss_dssp CCCCBCCCCSSSHHHHHTCCS-----------SCCCCEETTEECSSCCHHHHHHHHHT--CTTEEEEECCCCCC
T ss_pred CCEEEEEECCCChHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCEEEEEEEECCC
Confidence 679999999999999999999 9999999999998 89999999886 38999999999875
No 251
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=98.59 E-value=3.9e-08 Score=79.64 Aligned_cols=58 Identities=19% Similarity=0.250 Sum_probs=48.1
Q ss_pred cceEEEecCCCCcccccC-ceeeecccCCCCCCCcEEEEECCEEcCCH--HHHHHHHhcCCCCCEEEEEEEECC
Q 013014 350 SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVGDELLLQGIKQP 420 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aG-l~~~~~~~~~~L~~GDiIl~vnG~~i~~~--~dl~~~l~~~~~g~~v~l~v~R~g 420 (451)
.|++|.+|.+++||+++| |++ ||+|++|||++|.+. .+....+. ..++++.++|.|..
T Consensus 31 ~gv~V~~V~~~spA~~aG~L~~-----------GD~I~~Ing~~v~~~~~~~~~~~~~--~~~~~v~l~v~R~~ 91 (96)
T 2qkv_A 31 IGCTIADLIQGQYPEIDSKLQR-----------GDIITKFNGDALEGLPFQVSYALFK--GANGKVSMEVTRPK 91 (96)
T ss_dssp SSEEEEEECTTSCHHHHHHCCT-----------TCEEEEETTEECTTCCHHHHHHHHH--TCSSEEEEEEECCC
T ss_pred CcEEEEEeCCCChHHhcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHh--cCCCcEEEEEEeCC
Confidence 689999999999999999 999 999999999999874 33344443 35678999999863
No 252
>1wfv_A Membrane associated guanylate kinase inverted-2; atrophin-1 interacting protein 1, activin receptor interacting protein 1; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.58 E-value=2.7e-08 Score=81.34 Aligned_cols=73 Identities=19% Similarity=0.272 Sum_probs=58.0
Q ss_pred cccceeccchhhhhhCccceEEEecCCCCcccccC-ceeeecccCCCCCCCcEEEEECCEEcCCH--HHHHHHHhcCCCC
Q 013014 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVG 409 (451)
Q Consensus 333 ~lGi~~~~~~~~~~~~~~Gv~V~~v~~~s~a~~aG-l~~~~~~~~~~L~~GDiIl~vnG~~i~~~--~dl~~~l~~~~~g 409 (451)
.+|+.+..... .-.|++|.+|.+++||+++| |++ ||+|++|||+++.++ .++...+. ..|
T Consensus 23 g~G~~~~~~~~----~~~~~~V~~V~~~spA~~aG~l~~-----------GD~I~~vng~~v~~~~~~~~~~~~~--~~g 85 (103)
T 1wfv_A 23 GFGFSIRGGRE----YKMDLYVLRLAEDGPAIRNGRMRV-----------GDQIIEINGESTRDMTHARAIELIK--SGG 85 (103)
T ss_dssp SSSBCCEEETT----TTEEEECCCBCTTSHHHHHCSSCT-----------TCEEEEETTEECSSCCHHHHHHHHH--HHC
T ss_pred cCCEEEecccc----CCCCEEEEEECCCChHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHH--cCC
Confidence 36776653211 01489999999999999999 999 999999999999984 56666665 358
Q ss_pred CEEEEEEEECCeE
Q 013014 410 DELLLQGIKQPPV 422 (451)
Q Consensus 410 ~~v~l~v~R~g~~ 422 (451)
+++.++|.|+++.
T Consensus 86 ~~v~l~v~R~~~~ 98 (103)
T 1wfv_A 86 RRVRLLLKRGTGS 98 (103)
T ss_dssp SEECEEEECTTCS
T ss_pred CeEEEEEEECCCC
Confidence 9999999998864
No 253
>1q3o_A Shank1; PDZ, GKAP, peptide binding protein; 1.80A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1q3p_A 3qjm_A 3qjn_A 3o5n_A*
Probab=98.58 E-value=7.7e-08 Score=79.66 Aligned_cols=58 Identities=24% Similarity=0.357 Sum_probs=52.4
Q ss_pred cceEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEcCCH--HHHHHHHhcCCCCCEEEEEEEECC
Q 013014 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVGDELLLQGIKQP 420 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i~~~--~dl~~~l~~~~~g~~v~l~v~R~g 420 (451)
.|++|..|.+++||+++||++ ||+|++|||++|.++ .++..++.. .|+++.++|.|.+
T Consensus 45 ~gv~V~~V~~~spA~~aGl~~-----------GD~I~~vng~~v~~~~~~~~~~~l~~--~~~~v~l~v~~~~ 104 (109)
T 1q3o_A 45 ALQYLESVDEGGVAWRAGLRM-----------GDFLIEVNGQNVVKVGHRQVVNMIRQ--GGNTLMVKVVMVT 104 (109)
T ss_dssp SSEEEEEECTTSHHHHTTCCT-----------TCEEEEETTEECTTCCHHHHHHHHHH--TTTEEEEEEEEEE
T ss_pred CCEEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHh--CCCEEEEEEEECC
Confidence 589999999999999999999 999999999999999 888888876 3788999998754
No 254
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=98.58 E-value=1.2e-07 Score=97.64 Aligned_cols=70 Identities=24% Similarity=0.353 Sum_probs=63.4
Q ss_pred cceEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEcCCHHHHHHHHhcCCCCCEEEEEEEECCeEEEEEEEe
Q 013014 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDELLLQGIKQPPVLSDNLRL 429 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i~~~~dl~~~l~~~~~g~~v~l~v~R~g~~~~~~v~l 429 (451)
.|++|.+|.++|||+++||++ ||+|++|||++|.+++|+.+++.. + ++.+.++|.|+|+.+.+++..
T Consensus 363 ~gv~V~~V~~~spA~~aGL~~-----------GD~I~~vng~~v~~~~~~~~~l~~-~-~~~v~l~v~R~g~~~~~~~~~ 429 (436)
T 4a8c_A 363 KGIKIDEVVKGSPAAQAGLQK-----------DDVIIGVNRDRVNSIAEMRKVLAA-K-PAIIALQIVRGNESIYLLMRL 429 (436)
T ss_pred CCEEEEEeCCCCHHHHcCCCC-----------CCEEEEECCEECCCHHHHHHHHHh-C-CCeEEEEEEECCEEEEEEEEe
Confidence 589999999999999999999 999999999999999999999987 3 348999999999999888876
Q ss_pred eec
Q 013014 430 LWS 432 (451)
Q Consensus 430 ~~~ 432 (451)
..+
T Consensus 430 ~~~ 432 (436)
T 4a8c_A 430 EHH 432 (436)
T ss_pred ccc
Confidence 544
No 255
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=98.58 E-value=9.7e-08 Score=87.21 Aligned_cols=67 Identities=25% Similarity=0.338 Sum_probs=58.1
Q ss_pred cceEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEcCCHH--HHHHHHhcCCCCCEEEEEEEE---CCeEEE
Q 013014 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGS--DLYRILDQCKVGDELLLQGIK---QPPVLS 424 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i~~~~--dl~~~l~~~~~g~~v~l~v~R---~g~~~~ 424 (451)
.|++|.+|.+++||++ ||++ ||+|++|||++|.+.. ++...+.. .++.+.|+|.| +|+..+
T Consensus 24 ~g~~V~~v~~~spA~~-gl~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~--~~~~v~l~v~r~~~~G~~~~ 89 (195)
T 2qbw_A 24 DGIFVTRVQPEGPASK-LLQP-----------GDKIIQANGYSFINIEHGQAVSLLKT--FQNTVELIIVREVGNGAKQE 89 (195)
T ss_dssp CSEEEEEECTTSTTTT-TCCT-----------TCEEEEETTEECTTCCHHHHHHHHHH--CCSEEEEEEEEECSSSCEEE
T ss_pred CCEEEEEECCCChHHh-CCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEEcCCCCCCce
Confidence 6999999999999999 9999 9999999999999854 55555544 46799999999 999988
Q ss_pred EEEEee
Q 013014 425 DNLRLL 430 (451)
Q Consensus 425 ~~v~l~ 430 (451)
+++++.
T Consensus 90 ~~v~~~ 95 (195)
T 2qbw_A 90 IRVRVE 95 (195)
T ss_dssp EEEEEE
T ss_pred eEeEee
Confidence 888875
No 256
>2dlu_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.58 E-value=5.5e-08 Score=80.77 Aligned_cols=71 Identities=27% Similarity=0.463 Sum_probs=58.7
Q ss_pred cccceeccchhhhhhCccceEEEecCCCCcccccC-ceeeecccCCCCCCCcEEEEECCEEcCC--HHHHHHHHhcCCCC
Q 013014 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVG 409 (451)
Q Consensus 333 ~lGi~~~~~~~~~~~~~~Gv~V~~v~~~s~a~~aG-l~~~~~~~~~~L~~GDiIl~vnG~~i~~--~~dl~~~l~~~~~g 409 (451)
.+|+.+.... -.|++|.+|.+++||+++| |++ ||+|++|||++|.+ +.++..++.. .|
T Consensus 27 ~lG~~l~~~~------~~g~~V~~V~~~spA~~aG~l~~-----------GD~I~~vng~~v~~~~~~~~~~~l~~--~g 87 (111)
T 2dlu_A 27 GLGFGIVGGK------TSGVVVRTIVPGGLADRDGRLQT-----------GDHILKIGGTNVQGMTSEQVAQVLRN--CG 87 (111)
T ss_dssp CCCEEEECCS------SSSBEEEEECTTSSHHHHTCCCS-----------SCEEEEESSCCCTTSCHHHHHHHHHH--HC
T ss_pred ccCEEEeccC------CCCEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHh--CC
Confidence 4666665321 1589999999999999999 999 99999999999994 5788887765 47
Q ss_pred CEEEEEEEECCeE
Q 013014 410 DELLLQGIKQPPV 422 (451)
Q Consensus 410 ~~v~l~v~R~g~~ 422 (451)
+.+.++|.|+++.
T Consensus 88 ~~v~l~v~R~~~~ 100 (111)
T 2dlu_A 88 NSVRMLVARDPAG 100 (111)
T ss_dssp SEEEEEEEESCTT
T ss_pred CeEEEEEEeCCCC
Confidence 8999999998765
No 257
>2db5_A INAD-like protein; PDZ domain, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ, structural genomics; NMR {Homo sapiens}
Probab=98.57 E-value=6.8e-08 Score=82.44 Aligned_cols=75 Identities=24% Similarity=0.314 Sum_probs=60.1
Q ss_pred cccceeccchhhhhhCccceEEEecCCCCcccccC-ceeeecccCCCCCCCcEEEEECCEEcC---CHHHHHHHHhcCCC
Q 013014 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVS---NGSDLYRILDQCKV 408 (451)
Q Consensus 333 ~lGi~~~~~~~~~~~~~~Gv~V~~v~~~s~a~~aG-l~~~~~~~~~~L~~GDiIl~vnG~~i~---~~~dl~~~l~~~~~ 408 (451)
-+|+.+...... ..+..|++|.+|.+++||+++| |++ ||+|++|||++|. ++.++..++.. .
T Consensus 38 ~lG~~i~g~~~~-~~~~~gv~V~~V~~~spA~~aG~L~~-----------GD~Il~ing~~v~~~~~~~~~~~~l~~--~ 103 (128)
T 2db5_A 38 GLGFSVVALRSQ-NLGKVDIFVKDVQPGSVADRDQRLKE-----------NDQILAINHTPLDQNISHQQAIALLQQ--T 103 (128)
T ss_dssp CCCCEEEEEECS-SSSCEEEEEECCCTTSHHHHTCCCCS-----------SCBEEEESSCBCSTTSCHHHHHHHHHH--C
T ss_pred ccCEEEecccCC-CCCCCCEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCCHHHHHHHHHc--C
Confidence 566666431100 1123589999999999999999 999 9999999999998 88899988876 5
Q ss_pred CCEEEEEEEECCe
Q 013014 409 GDELLLQGIKQPP 421 (451)
Q Consensus 409 g~~v~l~v~R~g~ 421 (451)
|+.++|+|.|++.
T Consensus 104 ~~~v~l~v~r~~~ 116 (128)
T 2db5_A 104 TGSLRLIVAREPV 116 (128)
T ss_dssp CSEEEEEEEECCC
T ss_pred CCeEEEEEEcCCC
Confidence 7999999999864
No 258
>1tp5_A Presynaptic density protein 95; PDZ-peptide ligand complex, peptide binding protein; 1.54A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1tp3_A 1tq3_A 1be9_A 1bfe_A
Probab=98.57 E-value=3.9e-08 Score=82.75 Aligned_cols=72 Identities=26% Similarity=0.388 Sum_probs=56.3
Q ss_pred ccceeccchhhhhhCccceEEEecCCCCcccccC-ceeeecccCCCCCCCcEEEEECCEEcCCHHHHHHHHhcCCCCCEE
Q 013014 334 LGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDEL 412 (451)
Q Consensus 334 lGi~~~~~~~~~~~~~~Gv~V~~v~~~s~a~~aG-l~~~~~~~~~~L~~GDiIl~vnG~~i~~~~dl~~~l~~~~~g~~v 412 (451)
+|+.+..... ..|++|.+|.+++||+++| |++ ||+|++|||++|.++.+..........|+++
T Consensus 27 lG~~l~~~~~-----~~gv~V~~V~~~spA~~aG~L~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v 90 (119)
T 1tp5_A 27 LGFNIVGGED-----GEGIFISFILAGGPADLSGELRK-----------GDQILSVNGVDLRNASHEQAAIALKNAGQTV 90 (119)
T ss_dssp CCEEEEECGG-----GCCEEEEEECTTSHHHHHSCCCT-----------TEEEEEETTEECTTCCHHHHHHHHHTSCSEE
T ss_pred ccEEEecCCC-----CCCEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHcCCCeE
Confidence 6666654221 2689999999999999999 999 9999999999999986544333333468999
Q ss_pred EEEEEECCe
Q 013014 413 LLQGIKQPP 421 (451)
Q Consensus 413 ~l~v~R~g~ 421 (451)
.++|.|+++
T Consensus 91 ~l~v~r~~~ 99 (119)
T 1tp5_A 91 TIIAQYKPE 99 (119)
T ss_dssp EEEEEECHH
T ss_pred EEEEEECCc
Confidence 999999764
No 259
>2edp_A Fragment, shroom family member 4; APX/shroom family member, KIAA1202 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.56 E-value=5.1e-08 Score=79.54 Aligned_cols=60 Identities=15% Similarity=0.158 Sum_probs=51.9
Q ss_pred cceEEEecCCCCccccc-CceeeecccCCCCCCCcEEEEECCEEcCCH-HHHHHHHhcCCCCCEEEEEEEECCeE
Q 013014 350 SGVLVLDAPPNGPAGKA-GLLSTKRDAYGRLILGDIITSVNGKKVSNG-SDLYRILDQCKVGDELLLQGIKQPPV 422 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~a-Gl~~~~~~~~~~L~~GDiIl~vnG~~i~~~-~dl~~~l~~~~~g~~v~l~v~R~g~~ 422 (451)
.+++|.+|.+++||+++ ||++ ||+|++|||++|.++ .++...+.. .++.++|+|.|+++.
T Consensus 35 ~~v~V~~V~~~spA~~agGL~~-----------GD~I~~ing~~v~~~~~~~~~~~~~--~~~~v~l~v~R~~~~ 96 (100)
T 2edp_A 35 EPLTVSKIEDGGKAALSQKMRT-----------GDELVNINGTPLYGSRQEALILIKG--SFRILKLIVRRRNSG 96 (100)
T ss_dssp EEEEECCCCTTSHHHHHTSCCT-----------TCEEEEETTEECCSCSHHHHHHHHT--CCSSCEEEEEECCCS
T ss_pred CCeEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEEccchHHHHHHHHHh--CCCeEEEEEEeCCCC
Confidence 47899999999999999 9999 999999999999995 566666654 478899999999863
No 260
>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A
Probab=98.56 E-value=8e-08 Score=76.62 Aligned_cols=56 Identities=27% Similarity=0.366 Sum_probs=48.6
Q ss_pred cceEEEecCCCCccccc-CceeeecccCCCCCCCcEEEEECCEEcCC--HHHHHHHHhcCCCCCEEEEEEEE
Q 013014 350 SGVLVLDAPPNGPAGKA-GLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDELLLQGIK 418 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~a-Gl~~~~~~~~~~L~~GDiIl~vnG~~i~~--~~dl~~~l~~~~~g~~v~l~v~R 418 (451)
.|++|.+|.++|||+++ ||++ ||+|++|||++|.+ +.++...+.. .|++++++|.|
T Consensus 30 ~g~~V~~V~~~spA~~aggl~~-----------GD~I~~ing~~v~~~~~~~~~~~~~~--~~~~v~l~v~r 88 (90)
T 1qav_A 30 MPILISKIFKGLAADQTEALFV-----------GDAILSVNGEDLSSATHDEAVQALKK--TGKEVVLEVKY 88 (90)
T ss_dssp EEEEEEEECTTSHHHHTTCCCT-----------TEEEEEETTEECTTCCHHHHHHHHHT--CCSEEEEEEEE
T ss_pred CCEEEEEECCCCHHHhcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHh--CCCeEEEEEEE
Confidence 58999999999999999 9999 99999999999986 4566666654 47889999987
No 261
>3qik_A Phosphatidylinositol 3,4,5-trisphosphate-dependen exchanger 1 protein; PDZ domain, structural genomics consortium, SGC, hydrolase R; 2.29A {Homo sapiens}
Probab=98.56 E-value=4.4e-08 Score=79.77 Aligned_cols=57 Identities=30% Similarity=0.217 Sum_probs=50.2
Q ss_pred cceEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEc--CCHHHHHHHHhcC-CCCCEEEEEEE
Q 013014 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKV--SNGSDLYRILDQC-KVGDELLLQGI 417 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i--~~~~dl~~~l~~~-~~g~~v~l~v~ 417 (451)
.+.+|.+|.++|||++|||++ ||+|++|||++| .+|+|+...+... +.|+.+.+.|-
T Consensus 39 ~~~~I~~V~~gSpA~~AGL~~-----------GD~I~~Ing~~v~~~s~~dv~~~i~~~~~~g~~v~LLV~ 98 (101)
T 3qik_A 39 KAVVVKSVQRGSLAEVAGLQV-----------GRKIYSINEDLVFLRPFSEVESILNQSFCSRRPLRLLVA 98 (101)
T ss_dssp TEEEEEEECTTSHHHHHTCCT-----------TCBEEEETTEESTTSCHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred CCeEEEEECCCCHHHHcCCCC-----------CCEEEEECCEEcCcCCHHHHHHHHHHhhccCCeEEEEEe
Confidence 478899999999999999999 999999999997 4999999998864 35788888765
No 262
>3kzd_A TIAM-1, T-lymphoma invasion and metastasis-inducing prote; PDZ, cell junction, cell adhesion, signaling protein, nucleotide exchange factor; 1.30A {Homo sapiens} PDB: 3kze_A
Probab=98.55 E-value=1.2e-07 Score=76.57 Aligned_cols=68 Identities=26% Similarity=0.304 Sum_probs=52.2
Q ss_pred ccccceeccchhhhhhCccceEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEcCC--HHHHHHHHhcCCCC
Q 013014 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVG 409 (451)
Q Consensus 332 ~~lGi~~~~~~~~~~~~~~Gv~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i~~--~~dl~~~l~~~~~g 409 (451)
..+|+.+..... -+..|++|.+|.++|||+++||++ ||+|++|||++|.+ ++++..++..
T Consensus 20 ~~~Gf~v~~~~~---~~~~g~~V~~V~~~spA~~aGL~~-----------GD~Il~vng~~v~~~~~~~l~~~l~~---- 81 (94)
T 3kzd_A 20 DTYGFSLSSVEE---DGIRRLYVNSVKETGLASKKGLKA-----------GDEILEINNRAADALNSSMLKDFLSQ---- 81 (94)
T ss_dssp -CCSEEEEEECS---SSSCEEEEEEECTTSHHHHTTCCT-----------TCEEEEETTEEGGGCCHHHHHHHHHS----
T ss_pred CCcCEEEEecCC---CCcCCeEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHhC----
Confidence 356666654211 123689999999999999999999 99999999999994 6899988863
Q ss_pred CEEEEEEE
Q 013014 410 DELLLQGI 417 (451)
Q Consensus 410 ~~v~l~v~ 417 (451)
..++++|.
T Consensus 82 ~~l~ltV~ 89 (94)
T 3kzd_A 82 PSLGLLVR 89 (94)
T ss_dssp SEEEEEEE
T ss_pred CeEEEEEE
Confidence 45666665
No 263
>1x6d_A Interleukin-16; PDZ domain, lymphocyte chemoattractant factor (LCF), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=98.55 E-value=2.2e-08 Score=84.34 Aligned_cols=63 Identities=24% Similarity=0.288 Sum_probs=54.4
Q ss_pred cceEEEecCCCCcccccC-ceeeecccCCCCCCCcEEEEECCEEcC--CHHHHHHHHhcCCCCCEEEEEEEECCeEEE
Q 013014 350 SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCKVGDELLLQGIKQPPVLS 424 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aG-l~~~~~~~~~~L~~GDiIl~vnG~~i~--~~~dl~~~l~~~~~g~~v~l~v~R~g~~~~ 424 (451)
.|++|.+|.+++||+++| |++ ||+|++|||++|. ++.++..++... .+..+.+++.|+++..+
T Consensus 42 ~gv~V~~V~~~spA~~aG~L~~-----------GD~Il~ing~~v~~~~~~~~~~~l~~~-~~~~~~l~v~R~~~~~~ 107 (119)
T 1x6d_A 42 KVITVHRVFPNGLASQEGTIQK-----------GNEVLSINGKSLKGTTHHDALAILRQA-REPRQAVIVTRKLTPEA 107 (119)
T ss_dssp SSCEEEEECSSSHHHHHTSSCT-----------TCBCCEETTEECSSCCHHHHHHHHHHT-TSSSEEEEEEECCCSSS
T ss_pred CCEEEEEECCCChHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhC-CCCeEEEEEEcCCCccc
Confidence 689999999999999999 999 9999999999999 578888888663 46667789999987654
No 264
>1yph_C Chymotrypsin A, chain B; serine protease, hydrolase; 1.34A {Bos taurus} PDB: 1afq_B* 1ca0_B 1cbw_B 1cho_F 1gct_B 1ab9_B* 1ggd_B* 1gha_F 1ghb_F* 1gmc_F 1gmd_F 1gmh_F 1hja_B 1mtn_B 1n8o_B 1vgc_B* 1gg6_B 2cha_B* 2gch_F 2gct_B ...
Probab=98.55 E-value=1.2e-06 Score=74.70 Aligned_cols=85 Identities=14% Similarity=0.142 Sum_probs=60.7
Q ss_pred CeEEEEEEEcCCCeEEecccccCCCCcEEEEeC---------CCcEEEEEEEEEcCC-------CCEEEEEEcCCC---C
Q 013014 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFA---------DQSAYDAKIVGFDQD-------KDVAVLRIDAPK---D 211 (451)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHVv~~~~~i~V~~~---------dg~~~~a~vv~~d~~-------~DlAlLkv~~~~---~ 211 (451)
...|.|.+|+++ +|||+|||+.+ ..+.|.+. +++.+..+-+..++. +||||||++.+. .
T Consensus 24 ~~~CgGsLIs~~-~VLTAAHC~~~-~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~~~~~~ 101 (131)
T 1yph_C 24 FHFCGGSLINEN-WVVTAAHCGVT-TSDVVVAGEFDQGSSSEKIQKLKIAKVFKNSKYNSLTINNDITLLKLSTAASFSQ 101 (131)
T ss_dssp CEEEEEEEEETT-EEEECGGGCCC-TTSEEEESCSBTTCSSSCCEEEEEEEEEECTTCCTTTCCSCCEEEEESSCCCCBT
T ss_pred CEEEEEEEeeCC-EEEECHHHCCC-CCeEEEEeEccCCCCCCceEEEEEEEEEeCCCCCCCCCCCCEEEEEECCcccCCC
Confidence 457999999987 99999999976 44455542 123455665566543 599999998764 2
Q ss_pred CCcceecCCCC-CCCCCcEEEEeeCCC
Q 013014 212 KLRPIPIGVSA-DLLVGQKVYAIGNPF 237 (451)
Q Consensus 212 ~~~~l~l~~s~-~~~~G~~V~~iG~p~ 237 (451)
...|+.|.... .+..|+.+++.||..
T Consensus 102 ~v~picLp~~~~~~~~g~~~~v~GWG~ 128 (131)
T 1yph_C 102 TVSAVCLPSASDDFAAGTTCVTTGWGL 128 (131)
T ss_dssp TBCCCBCCCTTCCCCTTCEEEEEESCC
T ss_pred cCcceECCCcccCCCCCCEEEEEcCCc
Confidence 46677776443 356899999999763
No 265
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.55 E-value=5.5e-08 Score=80.77 Aligned_cols=61 Identities=23% Similarity=0.307 Sum_probs=54.8
Q ss_pred cceEEEecCCCCcccccC-ceeeecccCCCCCCCcEEEEECCEEcCC--HHHHHHHHhcCC--CCCEEEEEEEECCe
Q 013014 350 SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCK--VGDELLLQGIKQPP 421 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aG-l~~~~~~~~~~L~~GDiIl~vnG~~i~~--~~dl~~~l~~~~--~g~~v~l~v~R~g~ 421 (451)
.+++|.+|.+++||+++| |++ ||+|++|||+.+.+ ++++.++|.... .+.++++++.|+++
T Consensus 41 ~~~~V~~v~~~s~A~~aG~l~~-----------GD~Il~Vng~~~~~~~~~~~~~~l~~~~~r~~~~~~l~v~R~~~ 106 (109)
T 1wi4_A 41 PLVYIHEVIPGGDCYKDGRLKP-----------GDQLVSINKESMIGVSFEEAKSIITRAKLRSESPWEIAFIRSGP 106 (109)
T ss_dssp SSEEEEEECTTSHHHHHCSCCT-----------TCBEEEETTSCCTTCCHHHHHHHHHHSCCSSSSCEEEEEECCCC
T ss_pred CCEEEEEeCCCChHHHCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHccccCCCceEEEEEEeCCC
Confidence 479999999999999999 999 99999999999988 889999998753 48899999999875
No 266
>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.55 E-value=8e-08 Score=76.98 Aligned_cols=59 Identities=27% Similarity=0.364 Sum_probs=51.2
Q ss_pred cceEEEecCCCCcccccC-ceeeecccCCCCCCCcEEEEECCEEcCC--HHHHHHHHhcCCCCCEEEEEEEECCe
Q 013014 350 SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDELLLQGIKQPP 421 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aG-l~~~~~~~~~~L~~GDiIl~vnG~~i~~--~~dl~~~l~~~~~g~~v~l~v~R~g~ 421 (451)
.|++|.+|.+++||+++| |++ ||+|++|||+++.+ +.++...+.. .++++.++|.|+++
T Consensus 30 ~~~~V~~V~~~spA~~aGgl~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~--~~~~v~l~v~r~~~ 91 (93)
T 2dkr_A 30 SPIYISRVIPGGVADRHGGLKR-----------GDQLLSVNGVSVEGEQHEKAVELLKA--AQGSVKLVVRSGPS 91 (93)
T ss_dssp CCCEEEEECTTSHHHHHCCCCT-----------TCBEEEETTEECTTSCHHHHHHHHHH--CCSEEEEEECCCCS
T ss_pred CCEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHh--CCCcEEEEEEeCCC
Confidence 689999999999999996 999 99999999999995 5788877765 35789999998764
No 267
>1mfg_A ERB-B2 interacting protein; PDZ domain, protein-peptide complex, erbin., signaling protein; 1.25A {Homo sapiens} SCOP: b.36.1.1 PDB: 1mfl_A
Probab=98.54 E-value=7.1e-08 Score=77.73 Aligned_cols=57 Identities=28% Similarity=0.426 Sum_probs=49.6
Q ss_pred cceEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEcCC--HHHHHHHHhcCCCCCEEEEEEEECC
Q 013014 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDELLLQGIKQP 420 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i~~--~~dl~~~l~~~~~g~~v~l~v~R~g 420 (451)
.|++|.+|.+++||++ ||++ ||+|++|||++|.+ +.++...+. ..|+.++++|.|+.
T Consensus 35 ~gv~V~~V~~~spA~~-gL~~-----------GD~I~~vng~~v~~~~~~~~~~~~~--~~~~~v~l~v~R~~ 93 (95)
T 1mfg_A 35 DGIFVTRVQPEGPASK-LLQP-----------GDKIIQANGYSFINIEHGQAVSLLK--TFQNTVELIIVREV 93 (95)
T ss_dssp CCEEEEEECTTSTTTT-TCCT-----------TCEEEEETTEECTTCBHHHHHHHHH--HCCSEEEEEEEEEC
T ss_pred CCEEEEEECCCCchhh-CCCC-----------CCEEEEECCEEcCCCCHHHHHHHhh--cCCCeEEEEEEeCC
Confidence 6999999999999999 9999 99999999999988 455555555 35899999999964
No 268
>2gzv_A PRKCA-binding protein; protein kinase C, PDZ domain, structural genomics, structura genomics consortium, SGC, signaling protein; 1.12A {Homo sapiens} PDB: 2pku_A
Probab=98.54 E-value=1.2e-07 Score=79.34 Aligned_cols=71 Identities=21% Similarity=0.408 Sum_probs=56.8
Q ss_pred cccccceeccchhhhhhCccceEEEecCCCCcccccC-ceeeecccCCCCCCCcEEEEECCEEc--CCHHHHHHHHhcCC
Q 013014 331 RPILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKV--SNGSDLYRILDQCK 407 (451)
Q Consensus 331 ~~~lGi~~~~~~~~~~~~~~Gv~V~~v~~~s~a~~aG-l~~~~~~~~~~L~~GDiIl~vnG~~i--~~~~dl~~~l~~~~ 407 (451)
.+.+|+.+...... ..+++|.+|.++|||+++| |++ ||+|++|||++| .++.++.+++...
T Consensus 35 ~~~lG~~l~~~~~~----~~~~~V~~V~~gspA~~aG~L~~-----------GD~I~~Ing~~v~~~~~~~~~~~l~~~- 98 (114)
T 2gzv_A 35 QNLIGISIGGGAQY----CPCLYIVQVFDNTPAALDGTVAA-----------GDEITGVNGRSIKGKTKVEVAKMIQEV- 98 (114)
T ss_dssp TSCCSEEEEECCC------CCEEEEEECTTSHHHHHCCCCT-----------TCEEEEETTEECTTCCHHHHHHHHHHC-
T ss_pred CCcEeEEEEeCCCC----CCCEEEEEECCCChHHHCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHcC-
Confidence 45678777642211 1579999999999999999 999 999999999999 8999999988753
Q ss_pred CCCEEEEEEEE
Q 013014 408 VGDELLLQGIK 418 (451)
Q Consensus 408 ~g~~v~l~v~R 418 (451)
++.++++|.+
T Consensus 99 -~~~v~l~v~~ 108 (114)
T 2gzv_A 99 -KGEVTIHYNK 108 (114)
T ss_dssp -CSEEEEEEEC
T ss_pred -CCeEEEEEEe
Confidence 4568888765
No 269
>2d8i_A T-cell lymphoma invasion and metastasis 1 variant; PDZ domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.53 E-value=7.7e-08 Score=80.63 Aligned_cols=69 Identities=28% Similarity=0.340 Sum_probs=55.4
Q ss_pred ccceeccchhhhhhCccceEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEcCC--HHHHHHHHhcCCCCCE
Q 013014 334 LGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDE 411 (451)
Q Consensus 334 lGi~~~~~~~~~~~~~~Gv~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i~~--~~dl~~~l~~~~~g~~ 411 (451)
+|+.+...... +..|++|.+|.+++||+++||++ ||+|++|||++|.+ +.++.+++.. +.
T Consensus 31 ~G~~v~~~~~~---~~~gv~V~~V~~~spA~~aGL~~-----------GD~Il~Ing~~v~~~~~~~~~~~l~~----~~ 92 (114)
T 2d8i_A 31 YGFSLSSVEED---GIRRLYVNSVKETGLASKKGLKA-----------GDEILEINNRAADALNSSMLKDFLSQ----PS 92 (114)
T ss_dssp CCCEEEEEEET---TEEEEEEEECCTTSSHHHHTCCT-----------TCCEEEESSCBGGGCCHHHHHHHHTS----SE
T ss_pred cCEEEEecCcC---CcCCEEEEEeCCCCHHHHcCCCC-----------CCEEEEECCEECCCcCHHHHHHHHhC----Cc
Confidence 57776642111 33689999999999999999999 99999999999998 4688887763 48
Q ss_pred EEEEEEECC
Q 013014 412 LLLQGIKQP 420 (451)
Q Consensus 412 v~l~v~R~g 420 (451)
+.|+|.|..
T Consensus 93 v~l~v~R~p 101 (114)
T 2d8i_A 93 LGLLVRTYP 101 (114)
T ss_dssp EEEEEEECC
T ss_pred EEEEEEECC
Confidence 889988865
No 270
>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens}
Probab=98.53 E-value=1.1e-07 Score=80.06 Aligned_cols=58 Identities=21% Similarity=0.497 Sum_probs=52.7
Q ss_pred cceEEEecCCCCcccccC-ceeeecccCCCCCCCcEEEEECCEEcC--CHHHHHHHHhcCCCCCEEEEEEEECC
Q 013014 350 SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCKVGDELLLQGIKQP 420 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aG-l~~~~~~~~~~L~~GDiIl~vnG~~i~--~~~dl~~~l~~~~~g~~v~l~v~R~g 420 (451)
.|++|.+|.+++||+++| |++ ||+|++|||+.+. ++.++..++.. .+++++++|.|..
T Consensus 53 ~gv~V~~V~~gspA~~aG~L~~-----------GD~Il~VNg~~v~~~~~~~~~~~l~~--~~~~v~L~v~R~~ 113 (118)
T 3b76_A 53 LPIYVISVEPGGVISRDGRIKT-----------GDILLNVDGVELTEVSRSEAVALLKR--TSSSIVLKALEVK 113 (118)
T ss_dssp CCEEEEEECTTSHHHHHCSSCT-----------TCEEEEETTEEGGGSCHHHHHHHHHS--CCSEEEEEEEEEE
T ss_pred CCEEEEEECCCCHHHHCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEECC
Confidence 689999999999999999 999 9999999999999 88899988875 4788999999853
No 271
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=98.53 E-value=1.9e-07 Score=85.70 Aligned_cols=59 Identities=25% Similarity=0.379 Sum_probs=53.2
Q ss_pred cceEEEecCCCCccccc-CceeeecccCCCCCCCcEEEEECCEEcCCH--HHHHHHHhcCCCCCEEEEEEEECCe
Q 013014 350 SGVLVLDAPPNGPAGKA-GLLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVGDELLLQGIKQPP 421 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~a-Gl~~~~~~~~~~L~~GDiIl~vnG~~i~~~--~dl~~~l~~~~~g~~v~l~v~R~g~ 421 (451)
.|++|.+|.+++||+++ ||++ ||+|++|||+++.++ .++..++.. .|+++.++|.|+++
T Consensus 33 ~~~~V~~v~~~spA~~aggl~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~--~g~~v~l~v~R~~~ 94 (200)
T 2qt5_A 33 GKPRVSNLRQGGIAARSDQLDV-----------GDYIKAVNGINLAKFRHDEIISLLKN--VGERVVLEVEYELP 94 (200)
T ss_dssp SCSEEEEECTTSHHHHTTSCCT-----------TCEEEEETTEECTTSCHHHHHHHHHT--CCSEEEEEEEEECC
T ss_pred CCeEEEEECCCChHHhcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHh--CCCeEEEEEeccCC
Confidence 57899999999999999 9999 999999999999999 888877754 58899999999774
No 272
>1fc6_A Photosystem II D1 protease; D1 C-terminal processing protease, serine protease, serine- lysine catalytic DYAD, PDZ domain, photosynthesis; 1.80A {Scenedesmus obliquus} SCOP: b.36.1.3 c.14.1.2 PDB: 1fc9_A 1fc7_A 1fcf_A
Probab=98.53 E-value=3.5e-07 Score=92.87 Aligned_cols=85 Identities=25% Similarity=0.300 Sum_probs=67.9
Q ss_pred cccccceeccchhhhhhCccceEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEcCCH--HHHHHHHhcCCC
Q 013014 331 RPILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKV 408 (451)
Q Consensus 331 ~~~lGi~~~~~~~~~~~~~~Gv~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i~~~--~dl~~~l~~~~~ 408 (451)
+..+|+.+.... -.-.|++|..|.+++||+++||++ ||+|++|||++|.++ .++...+.. .+
T Consensus 84 ~~giG~~~~~~~----~~~~~~~V~~v~~~spA~~aGl~~-----------GD~I~~Ing~~v~~~~~~~~~~~l~~-~~ 147 (388)
T 1fc6_A 84 VTGVGLEITYDG----GSGKDVVVLTPAPGGPAEKAGARA-----------GDVIVTVDGTAVKGMSLYDVSDLLQG-EA 147 (388)
T ss_dssp CBBCSEEEEECT----TCSSCEEEEEECTTSHHHHTTCCT-----------TCEEEEETTEECTTCCHHHHHHHHCB-ST
T ss_pred eEEEEEEEEEee----cCCCcEEEEEeCCCChHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHhc-CC
Confidence 356777765421 012689999999999999999999 999999999999997 688877764 67
Q ss_pred CCEEEEEEEECCe---EEEEEEEeee
Q 013014 409 GDELLLQGIKQPP---VLSDNLRLLW 431 (451)
Q Consensus 409 g~~v~l~v~R~g~---~~~~~v~l~~ 431 (451)
|++++++|.|+|+ .++++++...
T Consensus 148 g~~v~l~v~r~g~~~~~~~~~l~r~~ 173 (388)
T 1fc6_A 148 DSQVEVVLHAPGAPSNTRTLQLTRQK 173 (388)
T ss_dssp TCEEEEEEEETTEEEEEEEEEEECBC
T ss_pred CCEEEEEEEeCCCCcceEEEEEEEce
Confidence 9999999999998 6666666443
No 273
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=98.52 E-value=1e-07 Score=86.66 Aligned_cols=62 Identities=26% Similarity=0.280 Sum_probs=56.4
Q ss_pred cceEEEecCCCCcccccC-ceeeecccCCCCCCCcEEEEECCEEcCC--HHHHHHHHhcCCCCCEEEEEEEECCeEEE
Q 013014 350 SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDELLLQGIKQPPVLS 424 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aG-l~~~~~~~~~~L~~GDiIl~vnG~~i~~--~~dl~~~l~~~~~g~~v~l~v~R~g~~~~ 424 (451)
.|++|.+|.++++|+++| |++ ||+|++|||++|.+ +.++.+++.. .++.+.++|.|+++...
T Consensus 130 ~gv~V~~V~~gs~A~~aG~L~~-----------GD~Il~Vng~~v~~~~~~~~~~~l~~--~~~~v~l~v~R~~~~~~ 194 (196)
T 3gsl_A 130 NSIYVTKIIEGGAAHKDGRLQI-----------GDKILAVNSVGLEDVMHEDAVAALKN--TYDVVYLKVAKPSNAET 194 (196)
T ss_dssp CCEEEEEECTTSHHHHHCCCCT-----------TCEEEEETTEECSSCBHHHHHHHHHS--CCEEEEEEEEEESCCCE
T ss_pred CCEEEEEECCCChHHhcCCCCC-----------CCEEEEECCCcCCCCCHHHHHHHHHc--CCCeEEEEEeCCCCccc
Confidence 689999999999999999 999 99999999999999 9999998865 48899999999987654
No 274
>1wf8_A Neurabin-I; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.52 E-value=4.9e-08 Score=80.57 Aligned_cols=59 Identities=19% Similarity=0.278 Sum_probs=51.9
Q ss_pred cceEEEecCCCCcccccC-ceeeecccCCCCCCCcEEEEECCEEcCC--HHHHHHHHhcCCCCCEEEEEEEECCe
Q 013014 350 SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDELLLQGIKQPP 421 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aG-l~~~~~~~~~~L~~GDiIl~vnG~~i~~--~~dl~~~l~~~~~g~~v~l~v~R~g~ 421 (451)
.|++|.+|.+++||+++| |++ ||+|++|||++|.+ +.++..++.. .++++.|+|.|++.
T Consensus 40 ~gv~V~~V~~~spA~~aG~L~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~--~~~~v~l~v~R~~~ 101 (107)
T 1wf8_A 40 LGIFVKTVTEGGAAQRDGRIQV-----------NDQIVEVDGISLVGVTQNFAATVLRN--TKGNVRFVIGREKP 101 (107)
T ss_dssp EEEEEEEECTTCHHHHHCSSCT-----------TCBEEEETTEECBSCCHHHHHHHHHH--CCSEEEEEEEEECC
T ss_pred CCEEEEEeCCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHhc--CCCeEEEEEEeCCC
Confidence 689999999999999999 999 99999999999985 5666666665 48999999999764
No 275
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=98.52 E-value=1.1e-07 Score=98.44 Aligned_cols=65 Identities=34% Similarity=0.421 Sum_probs=60.5
Q ss_pred cceEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEcCCHHHHHHHHhcCCCCCEEEEEEEECCeEEEEEE
Q 013014 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDELLLQGIKQPPVLSDNL 427 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i~~~~dl~~~l~~~~~g~~v~l~v~R~g~~~~~~v 427 (451)
.|++|.+|.++|||+++||++ ||+|++|||++|.+++|+.+++.. .++.+.++|.|+|+.+.+.+
T Consensus 386 ~Gv~V~~V~~gspA~~aGL~~-----------GD~I~~Vng~~v~~~~~~~~~l~~--~~~~v~l~v~R~g~~~~v~l 450 (451)
T 3pv2_A 386 IGVQVVGASENSAGWRAGIRP-----------GDIIISANKKPVTDVKSLQTIAQE--KKKELLVQVLRGPGSMYLLV 450 (451)
T ss_dssp EEEEEEEECTTSHHHHHTCCT-----------TCEEEEETTEECCSHHHHHHHTTS--SCSCEEEEEEETTEEEEEEE
T ss_pred CceEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCHHHHHHHHhc--CCCeEEEEEEECCEEEEEEe
Confidence 689999999999999999999 999999999999999999999976 57899999999999887765
No 276
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=98.51 E-value=1.4e-07 Score=75.65 Aligned_cols=60 Identities=23% Similarity=0.370 Sum_probs=51.6
Q ss_pred cceEEEecCCCCcccccC-ceeeecccCCCCCCCcEEEEECCEEc--CCHHHHHHHHhcCCCCCEEEEEEEECCeE
Q 013014 350 SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKV--SNGSDLYRILDQCKVGDELLLQGIKQPPV 422 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aG-l~~~~~~~~~~L~~GDiIl~vnG~~i--~~~~dl~~~l~~~~~g~~v~l~v~R~g~~ 422 (451)
.+++|.+|.+++||+++| |++ ||+|++|||+++ .++.++..++... ++++.++|.|..+.
T Consensus 28 ~~~~V~~v~~gspA~~aG~L~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~~--~~~v~l~v~~~~~~ 90 (93)
T 3o46_A 28 GAIIVARIMRGGAADRSGLIHV-----------GDELREVNGIPVEDKRPEEIIQILAQS--QGAITFKIIPGSKE 90 (93)
T ss_dssp CCEEEEEECTTSHHHHHTCCCT-----------TCEEEEETTEESTTSCHHHHHHHHHHC--CEEEEEEEECC---
T ss_pred CCEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhC--CCeEEEEEEeCCCC
Confidence 578999999999999999 999 999999999999 8899999999763 35899999986543
No 277
>1vae_A Rhophilin 2, rhophilin, RHO GTPase binding protein 2; PDZ domain, intracellular signaling cascade, signal transduction; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.51 E-value=9e-08 Score=79.82 Aligned_cols=57 Identities=26% Similarity=0.367 Sum_probs=51.3
Q ss_pred cceEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEcC--CHHHHHHHHhcCCCCCEEEEEEEE
Q 013014 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCKVGDELLLQGIK 418 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i~--~~~dl~~~l~~~~~g~~v~l~v~R 418 (451)
.+++|..|.+++||+++||++ ||+|++|||++|. +++|+.+++... .++++.++|+|
T Consensus 36 ~~v~V~~V~~~spA~~aGL~~-----------GD~Il~InG~~v~~~~~~d~~~~i~~~-~~~~v~l~V~~ 94 (111)
T 1vae_A 36 TPVQVHFLDPHCSASLAGAKE-----------GDYIVSIQGVDCKWLTVSEVMKLLKSF-GGEEVEMKVVS 94 (111)
T ss_dssp SSCEECCCCTTSSHHHHHCCT-----------TCEEEEETTEECSSCCHHHHHHHHHHT-TTSEECEEEEC
T ss_pred CCEEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhC-CCceEEEEEEe
Confidence 478899999999999999999 9999999999999 999999988864 46778888876
No 278
>3k1r_A Harmonin; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens} PDB: 2kbq_A 2kbr_A 2lsr_A
Probab=98.48 E-value=1.9e-07 Score=85.40 Aligned_cols=58 Identities=19% Similarity=0.323 Sum_probs=54.0
Q ss_pred cceEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEcCC--HHHHHHHHhcCCCCCEEEEEEEECCe
Q 013014 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDELLLQGIKQPP 421 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i~~--~~dl~~~l~~~~~g~~v~l~v~R~g~ 421 (451)
.|++|.+|.++|||+++||++ ||+|++|||++|.+ +.++...+.. |+.+.++|.|+|+
T Consensus 110 ~~~~V~~V~~gspA~~aGL~~-----------GD~Il~vng~~v~~~~~~~~~~~l~~---~~~v~l~v~r~g~ 169 (192)
T 3k1r_A 110 CGLFISHLIKGGQADSVGLQV-----------GDEIVRINGYSISSCTHEEVINLIRT---EKTVSIKVRHIGL 169 (192)
T ss_dssp EEEEEEEECTTSHHHHTTCCT-----------TEEEEEETTEECTTCCHHHHHHHHTS---SSEEEEEEEECCE
T ss_pred CCEEEEEECCCChHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHcC---CCeEEEEEEECCc
Confidence 589999999999999999999 99999999999999 8898887764 8999999999987
No 279
>1x5n_A Harmonin; PDZ domain, usher syndrome 1C protein, autoimmune enteropathy-related antigen AIE-75 ,antigen NY-CO-38/NY-CO- 37, PDZ-73 protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2kbs_A
Probab=98.48 E-value=1.7e-08 Score=84.41 Aligned_cols=65 Identities=25% Similarity=0.317 Sum_probs=54.0
Q ss_pred cceEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEcCCHHH--HHHHHhcCCCCCEEEEEEEEC-CeEEEEE
Q 013014 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSD--LYRILDQCKVGDELLLQGIKQ-PPVLSDN 426 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i~~~~d--l~~~l~~~~~g~~v~l~v~R~-g~~~~~~ 426 (451)
.|++|.+|.+++||+++||++ ||+|++|||++|.++.+ +...+.. ++.+.++|.|+ |+..+++
T Consensus 41 ~gv~V~~V~~~s~A~~aGL~~-----------GD~Il~vng~~v~~~~~~~~~~~~~~---~~~v~l~v~r~~g~~~~~~ 106 (114)
T 1x5n_A 41 PGIFISHVKPGSLSAEVGLEI-----------GDQIVEVNGVDFSNLDHKEAVNVLKS---SRSLTISIVAAAGRELFMT 106 (114)
T ss_dssp CSEEEEEECTTSTTTTTTCCT-----------TCEEEEETTEETTSCCTTHHHHHHHH---CSSEEEEECSSTTTHHHHS
T ss_pred CCEEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHhc---CCeEEEEEEcCCCCceEEE
Confidence 589999999999999999999 99999999999999854 6666654 35799999998 8765544
Q ss_pred EE
Q 013014 427 LR 428 (451)
Q Consensus 427 v~ 428 (451)
+.
T Consensus 107 ~~ 108 (114)
T 1x5n_A 107 DR 108 (114)
T ss_dssp SC
T ss_pred ec
Confidence 43
No 280
>2edv_A FERM and PDZ domain-containing protein 1; cytoskeletal-associated protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.48 E-value=1.1e-07 Score=77.06 Aligned_cols=57 Identities=21% Similarity=0.290 Sum_probs=49.7
Q ss_pred cceEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEcCC--HHHHHHHHhcCCCCCEEEEEEEECC
Q 013014 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDELLLQGIKQP 420 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i~~--~~dl~~~l~~~~~g~~v~l~v~R~g 420 (451)
.|++|.+|.+++||+ +||++ ||+|++|||++|.+ +.++...+.. .|+++.++|.|++
T Consensus 31 ~~~~V~~V~~~spA~-agL~~-----------GD~Il~ing~~v~~~~~~~~~~~~~~--~g~~v~l~v~R~~ 89 (96)
T 2edv_A 31 LPLTVVAVTAGGSAH-GKLFP-----------GDQILQMNNEPAEDLSWERAVDILRE--AEDSLSITVVRCT 89 (96)
T ss_dssp SSCBCCCBCSSSSST-TTSCT-----------TCBEEEESSCBSTTCCHHHHHHHHHH--CSSCEEEEEEECC
T ss_pred CCeEEEEECCCCchh-hCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEECC
Confidence 588999999999996 99999 99999999999987 5566666654 6899999999987
No 281
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=98.48 E-value=1.3e-07 Score=86.79 Aligned_cols=62 Identities=29% Similarity=0.441 Sum_probs=56.4
Q ss_pred cceEEEecCCCCcccccC-ceeeecccCCCCCCCcEEEEECCEEcC--CHHHHHHHHhcCCCCCEEEEEEEECCeEEE
Q 013014 350 SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCKVGDELLLQGIKQPPVLS 424 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aG-l~~~~~~~~~~L~~GDiIl~vnG~~i~--~~~dl~~~l~~~~~g~~v~l~v~R~g~~~~ 424 (451)
.|++|.++.+++||+++| |++ ||+|++|||++|. +++++.+++.. .++.+.++|.|+++.++
T Consensus 135 ~g~~V~~v~~~s~A~~aG~l~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~--~~~~v~l~v~R~~~~~~ 199 (200)
T 2qt5_A 135 RPVVITCVRPGGPADREGTIKP-----------GDRLLSVDGIRLLGTTHAEAMSILKQ--CGQEATLLIEYDVSVMD 199 (200)
T ss_dssp EEEEEEEECTTSHHHHHCCCCT-----------TCEEEEETTEECTTCCHHHHHHHHHT--TCSEEEEEEEEEEEC--
T ss_pred CCEEEEEECCCChHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEECCccCC
Confidence 689999999999999999 999 9999999999999 99999999986 68999999999887653
No 282
>2daz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.47 E-value=1.5e-07 Score=79.86 Aligned_cols=60 Identities=20% Similarity=0.354 Sum_probs=51.9
Q ss_pred cceEEEecCCCCcccccC-ceeeecccCCCCCCCcEEEEECCEEcCC--HHHHHHHHhcCCCCCEEEEEEEECCeE
Q 013014 350 SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDELLLQGIKQPPV 422 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aG-l~~~~~~~~~~L~~GDiIl~vnG~~i~~--~~dl~~~l~~~~~g~~v~l~v~R~g~~ 422 (451)
.|++|.+|.+++||+++| |++ ||+|++|||++|.+ +.++...+.. .++++.|+|.|+++.
T Consensus 51 ~gv~V~~V~~~spA~~aG~L~~-----------GD~Il~Ing~~v~~~~~~~~~~~~~~--~~~~v~l~v~R~~~~ 113 (124)
T 2daz_A 51 MSIFVVGINPEGPAAADGRMRI-----------GDELLEINNQILYGRSHQNASAIIKT--APSKVKLVFIRNEDA 113 (124)
T ss_dssp CCEEEEEECTTSHHHHHTCCCT-----------TCEECEESSCBCTTSCHHHHHHHHHH--SCSEEEEEEEECTTH
T ss_pred CCEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEeCCCc
Confidence 589999999999999999 999 99999999999976 5666666654 367999999999864
No 283
>1uhp_A Hypothetical protein KIAA1095; PDZ domain, semaphorin cytoplasmic domain associated protein, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.46 E-value=2.4e-07 Score=76.38 Aligned_cols=59 Identities=25% Similarity=0.447 Sum_probs=51.2
Q ss_pred cceEEEecCCCCccccc-CceeeecccCCCCCCCcEEEEECCEEcCC--HHHHHHHHhcCCCCCEEEEEEEECCe
Q 013014 350 SGVLVLDAPPNGPAGKA-GLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDELLLQGIKQPP 421 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~a-Gl~~~~~~~~~~L~~GDiIl~vnG~~i~~--~~dl~~~l~~~~~g~~v~l~v~R~g~ 421 (451)
.|++|.+|.+++||+++ ||++ ||+|++|||++|.+ +.++..++.. .++++.++|.|++.
T Consensus 41 ~gv~V~~V~~~spA~~aggL~~-----------GD~Il~vng~~v~~~~~~~~~~~~~~--~~~~v~l~v~R~~~ 102 (107)
T 1uhp_A 41 EGIFVSKIVDSGPAAKEGGLQI-----------HDRIIEVNGRDLSRATHDQAVEAFKT--AKEPIVVQVLRRTS 102 (107)
T ss_dssp CCCEEEEECSSSHHHHTTCCCS-----------SCEEEEETTEECTTCCHHHHHHHHHH--CCSSEEEEEEECCS
T ss_pred CCEEEEEeCCCChHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCcEEEEEEeCCC
Confidence 68999999999999999 9999 99999999999976 5566666664 57889999999764
No 284
>3soe_A Membrane-associated guanylate kinase, WW and PDZ containing protein 3; structural genomics consortium, SGC, PDZ domain, signaling P; 1.60A {Homo sapiens}
Probab=98.46 E-value=4.2e-07 Score=75.83 Aligned_cols=63 Identities=25% Similarity=0.274 Sum_probs=50.8
Q ss_pred ceEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEcCCH--HHHHHHHhcCCCCCEEEEEEEECCeEEEEE
Q 013014 351 GVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVGDELLLQGIKQPPVLSDN 426 (451)
Q Consensus 351 Gv~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i~~~--~dl~~~l~~~~~g~~v~l~v~R~g~~~~~~ 426 (451)
|..|..+.+ +++.+||++ ||+|++|||+.|.+. .|+.++|.....|++++|+|.|+|....+.
T Consensus 35 g~~V~~I~~--~~~~aGL~~-----------GD~Il~VNG~~v~~~~h~evv~~lk~~~~G~~v~L~V~R~g~~~p~~ 99 (113)
T 3soe_A 35 GQKVKMILD--SQWCQGLQK-----------GDIIKEIYHQNVQNLTHLQVVEVLKQFPVGADVPLLILRGGPPSPTK 99 (113)
T ss_dssp EEEEEEESC--GGGSTTCCT-----------TCEEEEETTEECTTSCHHHHHHHHHHSCTTCEEEEEEEESSCC----
T ss_pred CcEEEEecC--hHHhCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHcCCCCCEEEEEEEECCccCccc
Confidence 455777766 588899999 999999999999954 699999998777999999999999755443
No 285
>3l4f_D SH3 and multiple ankyrin repeat domains protein 1; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=98.46 E-value=2.7e-07 Score=79.28 Aligned_cols=61 Identities=23% Similarity=0.322 Sum_probs=52.4
Q ss_pred cceEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEcCC--HHHHHHHHhcCCCCCEEEEEEEECCeEE
Q 013014 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDELLLQGIKQPPVL 423 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i~~--~~dl~~~l~~~~~g~~v~l~v~R~g~~~ 423 (451)
.|++|.+|.+++||+++||++ ||+|++|||++|.+ +.++...+.. .|+++.++|.|.++..
T Consensus 65 ~gv~V~~V~~gspA~~aGL~~-----------GD~Il~Vng~~v~~~~~~~~~~~l~~--~g~~v~l~v~~~~~~~ 127 (132)
T 3l4f_D 65 ALQYLESVDEGGVAWRAGLRM-----------GDFLIEVNGQNVVKVGHRQVVNMIRQ--GGNTLMVKVVMVTRHP 127 (132)
T ss_dssp CSEEEEEECTTSGGGGGTCCT-----------TCEEEEESSSBCTTSCHHHHHHHHHH--TTTEEEEEEECCCC--
T ss_pred CCEEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCEEEEEEEECCCCC
Confidence 589999999999999999999 99999999999985 6777777765 5889999999876543
No 286
>2eei_A PDZ domain-containing protein 1; regulatory factor, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.45 E-value=1.5e-07 Score=77.44 Aligned_cols=60 Identities=25% Similarity=0.472 Sum_probs=51.8
Q ss_pred cceEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEcCC--HHHHHHHHhcCCCCCEEEEEEEECCeE
Q 013014 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDELLLQGIKQPPV 422 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i~~--~~dl~~~l~~~~~g~~v~l~v~R~g~~ 422 (451)
.|++|.+|.+++||+++||++ ||+|++|||++|.+ +.++...+.. .++.+.+++.|++..
T Consensus 32 ~g~~V~~V~~~spA~~aGl~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~--~~~~v~l~v~r~~~~ 93 (106)
T 2eei_A 32 KGVYMTDITPQGVAMRAGVLA-----------DDHLIEVNGENVEDASHEEVVEKVKK--SGSRVMFLLVDKETD 93 (106)
T ss_dssp CSCEECCCCTTSHHHHHTCCS-----------SEEEEEETTEECTTCCHHHHHHHHHH--HCSEEEEEECCTTTS
T ss_pred CCEEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHh--CCCeEEEEEEcCchh
Confidence 689999999999999999999 99999999999985 4677766654 478999999997754
No 287
>1uju_A Scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.44 E-value=5.4e-08 Score=80.90 Aligned_cols=59 Identities=25% Similarity=0.416 Sum_probs=53.0
Q ss_pred cceEEEecCCCCcccccC-ceeeecccCCCCCCCcEEEEECCEEcC--CHHHHHHHHhcCCCCCEEEEEEEECCe
Q 013014 350 SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCKVGDELLLQGIKQPP 421 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aG-l~~~~~~~~~~L~~GDiIl~vnG~~i~--~~~dl~~~l~~~~~g~~v~l~v~R~g~ 421 (451)
.|++|.+|.+++||+++| |++ ||+|++|||++|. ++.++..++.. .++++.|+|.|+..
T Consensus 44 ~gv~V~~V~~~spA~~aG~L~~-----------GD~Il~vng~~v~~~~~~~~~~~l~~--~g~~v~l~v~r~~~ 105 (111)
T 1uju_A 44 EGIFISKVSPTGAAGRDGRLRV-----------GLRLLEVNQQSLLGLTHGEAVQLLRS--VGDTLTVLVCDGFE 105 (111)
T ss_dssp CCCEEEEECTTSHHHHHSSCCT-----------TCBCCBBSSCBCTTSCHHHHHHHHSS--CSSEEEECCCCCCC
T ss_pred CCEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEECCC
Confidence 689999999999999999 999 9999999999999 67888887764 68999999998764
No 288
>1n7t_A 99-MER peptide of densin-180-like protein; PDZ domain, C-terminal peptide complex, high affnity ligand, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2h3l_A
Probab=98.44 E-value=2.8e-07 Score=75.38 Aligned_cols=57 Identities=28% Similarity=0.426 Sum_probs=49.7
Q ss_pred cceEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEcCC--HHHHHHHHhcCCCCCEEEEEEEECC
Q 013014 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDELLLQGIKQP 420 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i~~--~~dl~~~l~~~~~g~~v~l~v~R~g 420 (451)
.|++|.+|.+++||++ ||++ ||+|++|||+++.+ +.++...+. ..|++++++|.|+.
T Consensus 43 ~gv~V~~V~~~spA~~-gL~~-----------GD~I~~vng~~v~~~~~~~~~~~~~--~~g~~v~l~v~R~~ 101 (103)
T 1n7t_A 43 DGIFVTRVQPEGPASK-LLQP-----------GDKIIQANGYSFINIEHGQAVSLLK--TFQNTVELIIVREV 101 (103)
T ss_dssp CSEECCCBSSSSTTSS-SCCT-----------TCEEEEETTEECSSCCHHHHHHHHH--HCCSEEEEEEECCC
T ss_pred CCEEEEEECCCCchHH-CCCC-----------CCEEEEECCEECCCCCHHHHHHHhh--cCCCeEEEEEEecC
Confidence 6899999999999999 9999 99999999999988 556666665 35899999999974
No 289
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=98.43 E-value=3.8e-07 Score=83.89 Aligned_cols=68 Identities=18% Similarity=0.246 Sum_probs=55.0
Q ss_pred cceEEEecCCCCcccccC-ceeeecccCCCCCCCcEEEEECCEEcCC----HHHHHHHHhcCCCCCEEEEEEEECCeEEE
Q 013014 350 SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN----GSDLYRILDQCKVGDELLLQGIKQPPVLS 424 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aG-l~~~~~~~~~~L~~GDiIl~vnG~~i~~----~~dl~~~l~~~~~g~~v~l~v~R~g~~~~ 424 (451)
.|++|.+|.+++||+++| |++ ||+|++|||+++.+ +.++...+.. ..+..+.++|.|+++...
T Consensus 45 ~g~~V~~V~~~spA~~aG~L~~-----------GD~Il~vng~~v~~~~~~~~~~~~~~~~-~~~~~v~l~v~R~~~~~~ 112 (206)
T 3r0h_A 45 TGCVITHVYPEGQVAADKRLKI-----------FDHICDINGTPIHVGSMTTLKVHQLFHT-TYEKAVTLTVFRADPPEL 112 (206)
T ss_dssp SCEEEEEECTTSHHHHHCCCCT-----------TCEEEEETTEECCGGGSCHHHHHHHHHS-CCSSEEEEEEECCSSCCE
T ss_pred CCeEEEEECCCChHHhcCCCCC-----------CCEEEEECCEEcCCCccCHHHHHHHHHh-cCCCceEEEEEecccCCC
Confidence 689999999999999998 999 99999999999999 6666666654 233449999999987653
Q ss_pred --EEEEe
Q 013014 425 --DNLRL 429 (451)
Q Consensus 425 --~~v~l 429 (451)
+++.+
T Consensus 113 ~~~~v~l 119 (206)
T 3r0h_A 113 EKFNVDL 119 (206)
T ss_dssp EEEEEEE
T ss_pred cEEEEEE
Confidence 44444
No 290
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.42 E-value=6.6e-08 Score=81.45 Aligned_cols=58 Identities=28% Similarity=0.299 Sum_probs=50.9
Q ss_pred ceEEEecCCCCccccc-CceeeecccCCCCCCCcEEEEECCEEcCC--HHHHHHHHhcCC--CCCEEEEEEEEC
Q 013014 351 GVLVLDAPPNGPAGKA-GLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCK--VGDELLLQGIKQ 419 (451)
Q Consensus 351 Gv~V~~v~~~s~a~~a-Gl~~~~~~~~~~L~~GDiIl~vnG~~i~~--~~dl~~~l~~~~--~g~~v~l~v~R~ 419 (451)
.++|.+|.+++||+++ ||++ ||.|++|||+++.+ ++++.+.|.... .|++++|+|.|.
T Consensus 44 ~i~I~~V~~gspA~~aggL~~-----------GD~Il~Ing~~v~~~~~~~~~~~l~~~~~~~g~~v~l~v~r~ 106 (118)
T 1v6b_A 44 KVVVSAVYEGGAAERHGGVVK-----------GDEIMAINGKIVTDYTLAEAEAALQKAWNQGGDWIDLVVAVC 106 (118)
T ss_dssp SEEEEECCTTSHHHHHCSSCT-----------TCEEEEESSCBCTTCBHHHHHHHHHHHHHHTCSEEEEEEECC
T ss_pred CEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHHhhhcCCCeEEEEEEeC
Confidence 4899999999999999 9999 99999999999998 678888776542 389999999994
No 291
>3nfk_A Tyrosine-protein phosphatase non-receptor type 4; PDZ-PDZ-binding site complex, protein binding; 1.43A {Homo sapiens} SCOP: b.36.1.1 PDB: 3nfl_A 2vph_A
Probab=98.42 E-value=2.1e-07 Score=76.61 Aligned_cols=59 Identities=22% Similarity=0.317 Sum_probs=49.1
Q ss_pred cceEEEecCCCCcccccC--ceeeecccCCCCCCCcEEEEECCEEcCCH--HHHHHHHhcCCC--CCEEEEEEEEC
Q 013014 350 SGVLVLDAPPNGPAGKAG--LLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKV--GDELLLQGIKQ 419 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aG--l~~~~~~~~~~L~~GDiIl~vnG~~i~~~--~dl~~~l~~~~~--g~~v~l~v~R~ 419 (451)
.|++|.+|.+++||+++| |++ ||+|++|||++|.++ .++...+..... +..+.|+|.|+
T Consensus 43 ~~~~V~~V~~~spA~~aG~rL~~-----------GD~Il~ing~~v~~~~~~~~~~~i~~~~~~~~~~v~l~v~r~ 107 (107)
T 3nfk_A 43 MPVIVSRVAPGTPADLCVPRLNE-----------GDQVVLINGRDIAEHTHDQVVLFIKASCERHSGELMLLVRPN 107 (107)
T ss_dssp EEEEEEEECTTSHHHHSSSCCCT-----------TCEEEEETTEECTTCCHHHHHHHHHCGGGSBTTBEEEEEECC
T ss_pred CCeEEEEECCCCchHHcCCccCC-----------CCEEEEECCEECCCCCHHHHHHHHHhccccCCcEEEEEEEcC
Confidence 478999999999999999 999 999999999999966 566666765322 35899999885
No 292
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.42 E-value=2.1e-07 Score=76.90 Aligned_cols=59 Identities=27% Similarity=0.313 Sum_probs=51.9
Q ss_pred cceEEEecCCCCcccccC-ceeeecccCCCCCCCcEEEEECCEEcCC--HHHHHHHHhcCCCCCEEEEEEEECC
Q 013014 350 SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDELLLQGIKQP 420 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aG-l~~~~~~~~~~L~~GDiIl~vnG~~i~~--~~dl~~~l~~~~~g~~v~l~v~R~g 420 (451)
.|++|.+|.+++||+++| |++ ||+|++|||+.+.+ +.++..++... ++++++|+|.|.-
T Consensus 44 ~g~~V~~v~~~spA~~aG~L~~-----------GD~Il~Vng~~v~~~~~~~~~~~l~~~-~~~~v~l~v~R~~ 105 (108)
T 2d92_A 44 SVIVIRSLVADGVAERSGGLLP-----------GDRLVSVNEYCLDNTSLAEAVEILKAV-PPGLVHLGICSGP 105 (108)
T ss_dssp EEEEEEEECTTCHHHHHTCCCT-----------TCEEEEESSCBCTTCCHHHHHHHHHHS-CSEEEEEEEECCC
T ss_pred CCEEEEEECCCCHHHHCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhC-CCCeEEEEEEcCC
Confidence 689999999999999999 999 99999999999965 78998888764 4568999998853
No 293
>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}
Probab=98.41 E-value=5.4e-07 Score=73.81 Aligned_cols=59 Identities=27% Similarity=0.422 Sum_probs=50.6
Q ss_pred cceEEEecCCCCccccc-CceeeecccCCCCCCCcEEEEECCEEcCC--HHHHHHHHhcCCCCCEEEEEEEECCe
Q 013014 350 SGVLVLDAPPNGPAGKA-GLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDELLLQGIKQPP 421 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~a-Gl~~~~~~~~~~L~~GDiIl~vnG~~i~~--~~dl~~~l~~~~~g~~v~l~v~R~g~ 421 (451)
.|++|.+|.+++||+++ ||++ ||+|++|||+++.+ +.++..++.. .+++++|++.|...
T Consensus 35 ~~~~V~~V~~~s~A~~a~gL~~-----------GD~Il~Ing~~v~~~~~~~~~~~l~~--~~~~v~l~v~~~~~ 96 (103)
T 2dc2_A 35 VPILISEIHPGQPADRCGGLHV-----------GDAILAVNGVNLRDTKHKEAVTILSQ--QRGEIEFEVVYVAL 96 (103)
T ss_dssp EEEEEEEECTTSHHHHHTCCCS-----------SEEEEEETTEESTTSCHHHHHHHHHH--CCSEEEEEEEECC-
T ss_pred CCEEEEEECCCCHHHHhCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHh--CCCcEEEEEEecCC
Confidence 47899999999999995 9999 99999999999965 7788888875 35689999998764
No 294
>2cs5_A Tyrosine-protein phosphatase, non-receptor type 4; PDZ domain, ptpase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.40 E-value=9.2e-08 Score=80.50 Aligned_cols=64 Identities=20% Similarity=0.264 Sum_probs=52.2
Q ss_pred cceEEEecCCCCccccc--CceeeecccCCCCCCCcEEEEECCEEcCC--HHHHHHHHhcCC--CCCEEEEEEEECCeEE
Q 013014 350 SGVLVLDAPPNGPAGKA--GLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCK--VGDELLLQGIKQPPVL 423 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~a--Gl~~~~~~~~~~L~~GDiIl~vnG~~i~~--~~dl~~~l~~~~--~g~~v~l~v~R~g~~~ 423 (451)
.|++|.+|.+++||+++ ||++ ||+|++|||++|.+ +.++..++.... .+.++.++|.|++...
T Consensus 41 ~~v~V~~V~~~spA~~a~gGL~~-----------GD~Il~ing~~v~~~~~~~~~~~~~~~~~~~~~~v~l~v~R~~~~~ 109 (119)
T 2cs5_A 41 MPVIVSRVAPGTPADLCVPRLNE-----------GDQVVLINGRDIAEHTHDQVVLFIKASCERHSGELMLLVRPNAVYD 109 (119)
T ss_dssp EEEEEEEECSSSTTTSSSSCCCT-----------TCEEEEETTBCTTSSCHHHHHHHHHHHHHCCSSCEEEEEECCCCCC
T ss_pred CCeEEEEECCCCHHHHhhcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhccccCCCEEEEEEEcccccC
Confidence 47999999999999999 9999 99999999999987 467777776531 1358999999987544
Q ss_pred E
Q 013014 424 S 424 (451)
Q Consensus 424 ~ 424 (451)
.
T Consensus 110 ~ 110 (119)
T 2cs5_A 110 V 110 (119)
T ss_dssp C
T ss_pred c
Confidence 3
No 295
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=98.39 E-value=3.1e-07 Score=84.09 Aligned_cols=75 Identities=24% Similarity=0.318 Sum_probs=62.0
Q ss_pred ccccceeccchhhhhhCccceEEEecCCCCcccccC-ceeeecccCCCCCCCcEEEEECCEEcCC--HHHHHHHHhcCCC
Q 013014 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKV 408 (451)
Q Consensus 332 ~~lGi~~~~~~~~~~~~~~Gv~V~~v~~~s~a~~aG-l~~~~~~~~~~L~~GDiIl~vnG~~i~~--~~dl~~~l~~~~~ 408 (451)
..+|+.+....... ...|++|.+|.+++||+++| |++ ||+|++|||++|.+ ++++.+++...
T Consensus 119 ~~lG~~~~~~~~~~--~~~gv~V~~V~~~s~A~~aG~l~~-----------GD~I~~vng~~v~~~~~~~~~~~l~~~-- 183 (196)
T 1p1d_A 119 VELGITISSPSSRK--PGDPLVISDIKKGSVAHRTGTLEL-----------GDKLLAIDNIRLDSCSMEDAVQILQQC-- 183 (196)
T ss_dssp CCCCCEEECSCSSS--TTCCCEEEECCSSSHHHHTSCCCT-----------TCEEEEETTEEGGGCCHHHHHHHHHHC--
T ss_pred CCcCEEEECCCCCC--CCCCEEEEEECCCCcHHhcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhC--
Confidence 34677766532111 12689999999999999999 999 99999999999999 99999999874
Q ss_pred CCEEEEEEEECCe
Q 013014 409 GDELLLQGIKQPP 421 (451)
Q Consensus 409 g~~v~l~v~R~g~ 421 (451)
|+.+.++|.|++.
T Consensus 184 ~~~v~l~v~R~~~ 196 (196)
T 1p1d_A 184 EDLVKLKIRKDED 196 (196)
T ss_dssp TTCEEEEEECCCC
T ss_pred CCEEEEEEEeCCC
Confidence 8999999999863
No 296
>2ehr_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.39 E-value=2.7e-07 Score=77.36 Aligned_cols=59 Identities=24% Similarity=0.433 Sum_probs=51.2
Q ss_pred cceEEEecCCCCcccccC-ceeeecccCCCCCCCcEEEEECCEEcCC--HHHHHHHHhcCCCCCEEEEEEEECCe
Q 013014 350 SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDELLLQGIKQPP 421 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aG-l~~~~~~~~~~L~~GDiIl~vnG~~i~~--~~dl~~~l~~~~~g~~v~l~v~R~g~ 421 (451)
.|++|.+|.+++||+++| |++ ||+|++|||++|.+ +.++...+.. .|+.+.|+|.|..+
T Consensus 50 ~gv~V~~V~~~spA~~aG~L~~-----------GD~Il~vng~~v~~~~~~~~~~~~~~--~g~~v~l~v~r~~~ 111 (117)
T 2ehr_A 50 KGIFIKQVLEDSPAGKTNALKT-----------GDKILEVSGVDLQNASHSEAVEAIKN--AGNPVVFIVQSLSS 111 (117)
T ss_dssp CSEEEEEECSSSTTTSSCSCCT-----------TCEEEEESSCBCTTCCHHHHHHHHHT--SCSSEEEEECCBSC
T ss_pred CCEEEEEeCCCChHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEECCC
Confidence 689999999999999999 999 99999999999977 5566666664 58899999988654
No 297
>4e34_A Golgi-associated PDZ and coiled-coil motif-contai protein; PDZ-peptide complex, protein transport-inhibitor complex; 1.40A {Homo sapiens} PDB: 4e35_A
Probab=98.38 E-value=6e-07 Score=70.89 Aligned_cols=56 Identities=29% Similarity=0.457 Sum_probs=47.9
Q ss_pred cceEEEecCCCCcccc-cCceeeecccCCCCCCCcEEEEECCEEcC--CHHHHHHHHhcCCCCCEEEEEEEE
Q 013014 350 SGVLVLDAPPNGPAGK-AGLLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCKVGDELLLQGIK 418 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~-aGl~~~~~~~~~~L~~GDiIl~vnG~~i~--~~~dl~~~l~~~~~g~~v~l~v~R 418 (451)
.|++|.+|.++|||++ +||++ ||+|++|||+++. ++.++...+.. .++++.++|++
T Consensus 28 ~~~~V~~V~~gspA~~~agl~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~--~~~~v~l~v~~ 86 (87)
T 4e34_A 28 VPILISEIHPGQPADRCGGLHV-----------GDAILAVNGVNLRDTKHKEAVTILSQ--QRGEIEFEVVY 86 (87)
T ss_dssp EEEEEEEECTTSHHHHHSCCCT-----------TEEEEEETTEECTTCCHHHHHHHHHH--CCSEEEEEEEE
T ss_pred CCEEEEEECCCCHHHhcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEE
Confidence 5789999999999999 79999 9999999999995 55788877764 57788888764
No 298
>2pka_B Kallikrein A; serine proteinase; 2.05A {Sus scrofa} SCOP: b.47.1.2 PDB: 2kai_B 1hia_B
Probab=98.38 E-value=3e-06 Score=74.22 Aligned_cols=126 Identities=17% Similarity=0.254 Sum_probs=77.8
Q ss_pred CCCEEEEEEcCCC---CCCcceecCCCCCCCCCcEEEEeeCCCCCC--------CceEEeEEeeeeeeeccCCC-CCCcc
Q 013014 198 DKDVAVLRIDAPK---DKLRPIPIGVSADLLVGQKVYAIGNPFGLD--------HTLTTGVISGLRREISSAAT-GRPIQ 265 (451)
Q Consensus 198 ~~DlAlLkv~~~~---~~~~~l~l~~s~~~~~G~~V~~iG~p~g~~--------~~~~~G~Vs~~~~~~~~~~~-~~~~~ 265 (451)
.+||||||++.+. ....|+.|.... ...|+.+++.||..... .......+.-+......... .....
T Consensus 7 ~nDIALl~L~~~v~~~~~v~picLp~~~-~~~~~~~~v~GWG~~~~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~~ 85 (152)
T 2pka_B 7 SHDLMLLRLQSPAKITDAVKVLELPTQE-PELGSTCEASGWGSIEPGPDDFEFPDEIQCVQLTLLQNTFCADAHPDKVTE 85 (152)
T ss_dssp TTCCEEEEESSCCCCCSSCCCCCCCSSC-CCTTCEEEEEESSCSSCCSSCCCCCSBCEEEEEEEECHHHHHHHCSSBCCT
T ss_pred CCCEEEEEECCCCcCCCCEEeEECCCCC-CCCCCEEEEEecccccCCCCcCCCCccceEEEeEEcCHHHhhhhhcCCCCC
Confidence 5799999998764 246778886443 46799999999864321 12233333322222111000 01112
Q ss_pred cEEEEc-----ccCCCCCCCCceeCCCceEEEEEeeeeCCCCCccceeEEEeccCchhhHHHhhh
Q 013014 266 DVIQTD-----AAINPGNSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (451)
Q Consensus 266 ~~i~~d-----~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (451)
.++-.. ...+.|+|||||+- +|+++||+++....++.....+....+....+||++.++
T Consensus 86 ~~iCa~~~~~~~~~C~GDsGgPL~~-~g~l~Gi~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~~~ 149 (152)
T 2pka_B 86 SMLCAGYLPGGKDTCMGDSGGPLIC-NGMWQGITSWGHTPCGSANKPSIYTKLIFYLDWIDDTIT 149 (152)
T ss_dssp TEEEEECTTSSCBCCTTCTTCEEEE-TTEEEEEECCCCSSTTCTTCCEEEEEGGGGHHHHHHHHH
T ss_pred CEEeeccCCCCCcccCCccccceEE-CCEEEEEEecCCCCCCCCCCCeEEEEHHHHHHHHHHHhc
Confidence 344332 35788999999996 589999999863344433345677888888888877654
No 299
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=98.36 E-value=3.9e-07 Score=92.55 Aligned_cols=72 Identities=26% Similarity=0.386 Sum_probs=61.9
Q ss_pred cccceeccchhhhhhCccceEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEcCC--HHHHHHHHhcCCCCC
Q 013014 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGD 410 (451)
Q Consensus 333 ~lGi~~~~~~~~~~~~~~Gv~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i~~--~~dl~~~l~~~~~g~ 410 (451)
.||+.+.... ..|++|.+|.++|||+++||++ ||+|++|||+++.+ ++++...+....+|+
T Consensus 20 ~lG~~i~gg~------~~gi~V~~V~~gspA~~aGL~~-----------GD~Il~VnG~~v~~~~~~e~~~~l~~~~~g~ 82 (391)
T 3tsz_A 20 SVGLRLAGGN------DVGIFVAGVLEDSPAAKEGLEE-----------GDQILRVNNVDFTNIIREEAVLFLLDLPKGE 82 (391)
T ss_dssp SCCEEEEEET------TTEEEEEEECTTCHHHHTTCCT-----------TEEEEEETTEECTTCCHHHHHHHHHHSCTTS
T ss_pred ceeEEEEecC------CCCEEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhhcCCC
Confidence 3777665321 1689999999999999999999 99999999999987 889999998767899
Q ss_pred EEEEEEEECCe
Q 013014 411 ELLLQGIKQPP 421 (451)
Q Consensus 411 ~v~l~v~R~g~ 421 (451)
+++++|.|+|+
T Consensus 83 ~v~l~v~r~~~ 93 (391)
T 3tsz_A 83 EVTILAQKKKD 93 (391)
T ss_dssp EEEEEEEECHH
T ss_pred eEEEEEeeCCc
Confidence 99999999874
No 300
>1um7_A Synapse-associated protein 102; PDZ, discs large homolog 3, DLG3-human presynaptic protein, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.36 E-value=2.1e-07 Score=77.34 Aligned_cols=71 Identities=28% Similarity=0.406 Sum_probs=56.6
Q ss_pred cccceeccchhhhhhCccceEEEecCCCCcccccC-ceeeecccCCCCCCCcEEEEECCEEcCCH--HHHHHHHhcCCCC
Q 013014 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVG 409 (451)
Q Consensus 333 ~lGi~~~~~~~~~~~~~~Gv~V~~v~~~s~a~~aG-l~~~~~~~~~~L~~GDiIl~vnG~~i~~~--~dl~~~l~~~~~g 409 (451)
-+|+.+..... ..|++|.+|.+++||+++| |++ ||+|++|||++|.++ .++..++.. .+
T Consensus 27 glG~~l~~~~~-----~~gv~V~~V~~~s~A~~aG~L~~-----------GD~Il~Vng~~v~~~~~~~~~~~~~~--~~ 88 (113)
T 1um7_A 27 GLGFNIVGGED-----GEGIFVSFILAGGPADLSGELRR-----------GDRILSVNGVNLRNATHEQAAAALKR--AG 88 (113)
T ss_dssp CSSBCCBCCST-----TCCCBCCCBCSSSHHHHTTCCCT-----------TCEEEEESSCBCTTCCHHHHHHHHHS--CC
T ss_pred cccEEEEeccC-----CCCEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHh--CC
Confidence 35666653221 2689999999999999999 999 999999999999997 566655553 58
Q ss_pred CEEEEEEEECCe
Q 013014 410 DELLLQGIKQPP 421 (451)
Q Consensus 410 ~~v~l~v~R~g~ 421 (451)
+.+.++|.|+++
T Consensus 89 ~~v~l~v~r~~~ 100 (113)
T 1um7_A 89 QSVTIVAQYRPE 100 (113)
T ss_dssp SEEEEEEECCHH
T ss_pred CcEEEEEEECcc
Confidence 899999999764
No 301
>1lvm_A Catalytic domain of the nuclear inclusion protein A (NIA); beta barrel, chymotrypsin-type cystein protease, enzyme- peptide complex; 1.80A {Tobacco etch virus} SCOP: b.47.1.3 PDB: 1lvb_A 1q31_A
Probab=98.36 E-value=3.9e-05 Score=71.02 Aligned_cols=171 Identities=15% Similarity=0.232 Sum_probs=106.5
Q ss_pred hCCceEEEEeeeeccCccccccccccCeEEEEEEEcCCCeEEecccccCCC-CcEEEEeCCCcEEEEE-----EEEEcCC
Q 013014 125 NTPSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKGHVVTNYHVIRGA-SDIRVTFADQSAYDAK-----IVGFDQD 198 (451)
Q Consensus 125 ~~~SVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHVv~~~-~~i~V~~~dg~~~~a~-----vv~~d~~ 198 (451)
+...|+.++..+.+. ...--|+... .||+|++|..+.. ..++|+...|.- ... -+..-+.
T Consensus 22 Ia~~ic~l~n~sdg~-----------~~~l~gigyG--~~iItn~HLf~~nnG~L~I~s~hG~f-~v~nt~~lki~~i~g 87 (229)
T 1lvm_A 22 ISSTICHLTNESDGH-----------TTSLYGIGFG--PFIITNKHLFRRNNGTLLVQSLHGVF-KVKNTTTLQQHLIDG 87 (229)
T ss_dssp HHTTEEEEEEEETTE-----------EEEEEEEEET--TEEEECGGGGGCCSSEEEEEETTEEE-EESCGGGSEEEECTT
T ss_pred hheEEEEEEeccCCc-----------eEEEEEEeEC--CEEEeChhhhccCCCcEEEEeCCCeE-EeCCCCceeeEEeCC
Confidence 345678887643221 1233466664 3999999999876 678888876642 211 2344468
Q ss_pred CCEEEEEEcCCCCCCcceecC-CCCCCCCCcEEEEeeCCCCCCCceEEeEEeeeeeeeccCCCCCCcccEEEEcccCCCC
Q 013014 199 KDVAVLRIDAPKDKLRPIPIG-VSADLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINPG 277 (451)
Q Consensus 199 ~DlAlLkv~~~~~~~~~l~l~-~s~~~~~G~~V~~iG~p~g~~~~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G 277 (451)
.||.++|+.. ++||.+-. .-..++.||+|+++|.-+..... ...|+......... + ..+-..-.....|
T Consensus 88 ~DiiiIrmPk---DfpPf~~~l~FR~P~~~e~V~lVg~~fq~k~~--~s~vSesS~i~p~~--~---~~fWkHwIsT~~G 157 (229)
T 1lvm_A 88 RDMIIIRMPK---DFPPFPQKLKFREPQREERICLVTTNFQTKSM--SSMVSDTSCTFPSS--D---GIFWKHWIQTKDG 157 (229)
T ss_dssp SSCEEEECCT---TSCCCCSCCCBCCCCTTCEEEEEEEECSSSSC--EEEECCCEECEEET--T---TTEEEECBCCCTT
T ss_pred ccEEEEeCCC---cCCCcccccccCCCCCCCeEEEEEeEeecCCc--cEEECCcceeEecC--C---CCEeEEEeeCCCC
Confidence 8999999964 46666532 22568899999999976554332 12232221111111 1 2344555667789
Q ss_pred CCCCceeC-CCceEEEEEeeeeCCCCCccceeEEEeccC-chhhHHHh
Q 013014 278 NSGGPLLD-SSGSLIGINTAIYSPSGASSGVGFSIPVDT-VNGIVDQL 323 (451)
Q Consensus 278 ~SGGPlvd-~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~-i~~~l~~l 323 (451)
+=|.|+++ .+|++|||++..... ...+|+.|+.. +.++++..
T Consensus 158 ~CGlPlVs~~Dg~IVGiHsl~~~~----~~~NyF~~f~~~f~~~L~~~ 201 (229)
T 1lvm_A 158 QCGSPLVSTRDGFIVGIHSASNFT----NTNNYFTSVPKNFMELLTNQ 201 (229)
T ss_dssp CTTCEEEETTTCCEEEEEEEEETT----SCSEEEEECCTTHHHHHHCG
T ss_pred cCCCcEEECCCCcEEEEEcccccC----CCeEEEeCCCHHHHHHHhcc
Confidence 99999999 499999999987543 23678888743 33555544
No 302
>3hpk_A Protein interacting with PRKCA 1; oxidized, PDZ domain, kinase, protein binding; 2.20A {Rattus norvegicus} PDB: 3hpm_A
Probab=98.36 E-value=6.6e-07 Score=75.89 Aligned_cols=56 Identities=25% Similarity=0.443 Sum_probs=50.3
Q ss_pred cceEEEecCCCCcccccC-ceeeecccCCCCCCCcEEEEECCEEcC--CHHHHHHHHhcCCCCCEEEEEEEE
Q 013014 350 SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCKVGDELLLQGIK 418 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aG-l~~~~~~~~~~L~~GDiIl~vnG~~i~--~~~dl~~~l~~~~~g~~v~l~v~R 418 (451)
.|++|.+|.+++||+++| |++ ||+|++|||+++. ++.++...+.. .++++.++|.|
T Consensus 45 ~~~~V~~v~~gspA~~aG~L~~-----------GD~Il~ing~~v~~~~~~~~~~~l~~--~~~~v~l~v~r 103 (125)
T 3hpk_A 45 PCLYIVQVFDNTPAALDGTVAA-----------GDEITGVNGRSIKGKTKVEVAKMIQE--VKGEVTIHYNK 103 (125)
T ss_dssp SSEEEEEECTTSHHHHHCCCCT-----------TCEEEEETTEECTTCCHHHHHHHHHH--SCSEEEEEEEE
T ss_pred CCEEEEEeCCCCHHHHCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEE
Confidence 578999999999999999 999 9999999999998 67888888876 35679999988
No 303
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=98.34 E-value=4.5e-07 Score=77.64 Aligned_cols=60 Identities=8% Similarity=0.125 Sum_probs=52.8
Q ss_pred cceEEEecCCCCccccc-CceeeecccCCCCCCCcEEEEECCEEcCC--HHHHHHHHhcCCCCCEEEEEEEECCe
Q 013014 350 SGVLVLDAPPNGPAGKA-GLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDELLLQGIKQPP 421 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~a-Gl~~~~~~~~~~L~~GDiIl~vnG~~i~~--~~dl~~~l~~~~~g~~v~l~v~R~g~ 421 (451)
.+++|.+|.+++||+++ ||++ ||+|++|||+.+.+ ++++.+++... .+..+.++|.|++.
T Consensus 57 ~~i~I~~V~~gs~A~~aggL~~-----------GD~Il~Vng~~v~~~~~~~~~~~l~~~-~~~~v~l~v~r~~~ 119 (130)
T 1i16_A 57 KPLTINRIFKGAASEQSETVQP-----------GDEILQLGGTAMQGLTRFEAWNIIKAL-PDGPVTIVIRRKSL 119 (130)
T ss_dssp CCCEEEEECSSCCCSSSCCCCT-----------TCCEEECSSCBGGGSCHHHHHHHHHTS-CSSEEEEEEEEESS
T ss_pred CCEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhC-CCceEEEEEEeCCC
Confidence 57999999999999999 9999 99999999999988 57888888763 56789999999764
No 304
>3egg_C Spinophilin; PP1, serine/threonine phosphatase, post synapti density, glutametergic receptors, carbohydrate metabolism, cycle, cell division; HET: MES; 1.85A {Rattus norvegicus} PDB: 3egh_C* 3hvq_C 2fn5_A
Probab=98.32 E-value=7.6e-07 Score=79.91 Aligned_cols=57 Identities=18% Similarity=0.286 Sum_probs=51.3
Q ss_pred cceEEEecCCCCcccccC-ceeeecccCCCCCCCcEEEEECCEEc--CCHHHHHHHHhcCCCCCEEEEEEEEC
Q 013014 350 SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKV--SNGSDLYRILDQCKVGDELLLQGIKQ 419 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aG-l~~~~~~~~~~L~~GDiIl~vnG~~i--~~~~dl~~~l~~~~~g~~v~l~v~R~ 419 (451)
.|++|.+|.+++||+++| |++ ||+|++|||+.+ .++.++..+|.. .|+.|.|+|.|+
T Consensus 111 ~gi~V~~V~~gspA~~aG~L~~-----------GD~Il~VNG~~v~~~~~~~~~~~l~~--~g~~v~L~V~R~ 170 (170)
T 3egg_C 111 LGIFVKTVTEGGAAHRDGRIQV-----------NDLLVEVDGTSLVGVTQSFAASVLRN--TKGRVRFMIGRE 170 (170)
T ss_dssp BEEEEEEECTTSHHHHHCCCCT-----------TCEEEEETTEECTTBCHHHHHHHHHH--CCSEEEEEEEEC
T ss_pred CCEEEEEECCCChHHHCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCEEEEEEEeC
Confidence 689999999999999999 999 999999999999 566788888876 578999999995
No 305
>2z17_A Pleckstrin homology SEC7 and coiled-coil domains- binding protein; PDZ domain, cytoplasm, membrane, polymorphism, protein binding; 2.70A {Homo sapiens}
Probab=98.32 E-value=3.1e-07 Score=75.30 Aligned_cols=54 Identities=22% Similarity=0.404 Sum_probs=48.6
Q ss_pred cceEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEcC--CHHHHHHHHhcCCCCCEEEEEE
Q 013014 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCKVGDELLLQG 416 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i~--~~~dl~~~l~~~~~g~~v~l~v 416 (451)
.|++|..|.+++||+++||++ ||+|++|||++|. +++++.+++... +++++++|
T Consensus 48 ~~~~V~~V~~~spA~~aGl~~-----------GD~I~~vng~~v~~~~~~~~~~~l~~~--~~~v~l~v 103 (104)
T 2z17_A 48 MFTLICKIQEDSPAHCAGLQA-----------GDVLANINGVSTEGFTYKQVVDLIRSS--GNLLTIET 103 (104)
T ss_dssp CCEEEEEECTTSHHHHHTCCT-----------TCBCCEETTEECTTCCHHHHHHHHHHT--TTEEEEEC
T ss_pred CCeEEEEECCCChHHHcCCCC-----------CCEEEEECCEEcCCCCHHHHHHHHHhC--CCcEEEEE
Confidence 689999999999999999999 9999999999999 889999999875 34777765
No 306
>2csj_A TJP2 protein; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.29 E-value=2.7e-07 Score=77.39 Aligned_cols=59 Identities=24% Similarity=0.304 Sum_probs=50.7
Q ss_pred cceEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEcCCH--HHHHHHHhcCCCCCEEEEEEEECCeE
Q 013014 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVGDELLLQGIKQPPV 422 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i~~~--~dl~~~l~~~~~g~~v~l~v~R~g~~ 422 (451)
.|++|.+|.+++||+ +||++ ||+|++|||++|.++ .++..++.. .|+++.|+|.|+++.
T Consensus 46 ~gv~V~~V~~~spA~-~gL~~-----------GD~I~~Vng~~v~~~~~~~~~~~l~~--~~~~v~l~v~R~~~~ 106 (117)
T 2csj_A 46 TSIVISDVLPGGPAD-GLLQE-----------NDRVVMVNGTPMEDVLHSFAVQQLRK--SGKIAAIVVKRPRKV 106 (117)
T ss_dssp CBCEEEEECTTSSHH-HHBCT-----------TCEEEEESSCBCBTCCHHHHHHHHHH--SCSEEEEEEEEEEEC
T ss_pred CCEEEEEECCCCccc-ccCCC-----------CCEEEEECCEECCCcCHHHHHHHHhc--CCCeEEEEEEECCcc
Confidence 689999999999997 99999 999999999999875 566666665 589999999997653
No 307
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}
Probab=98.29 E-value=6.7e-07 Score=92.44 Aligned_cols=61 Identities=28% Similarity=0.386 Sum_probs=57.1
Q ss_pred cceEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEcCC--HHHHHHHHhcCCCCCEEEEEEEECCe
Q 013014 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDELLLQGIKQPP 421 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i~~--~~dl~~~l~~~~~g~~v~l~v~R~g~ 421 (451)
.|++|..|.++|||+++||++ ||+|++|||+.|.+ .+++..+|....+|+.++|+|.|+|+
T Consensus 23 ~Gi~V~~V~~gspA~~aGL~~-----------GD~Il~VNG~~v~~~t~~e~~~~L~~~~~g~~v~L~V~r~g~ 85 (468)
T 3shw_A 23 VGIFVAGVLEDSPAAKEGLEE-----------GDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTILAQKKKD 85 (468)
T ss_dssp TEEEEEEECSSSHHHHTTCCT-----------TEEEEEETTEECTTCCHHHHHHHHHHSCTTSEEEEEEEECHH
T ss_pred CCEEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEEEEECCc
Confidence 689999999999999999999 99999999999988 88999999887789999999999875
No 308
>2krg_A Na(+)/H(+) exchange regulatory cofactor NHE-RF1; acetylation, cell projection, disease mutation, membrane, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=98.25 E-value=3.9e-08 Score=91.74 Aligned_cols=67 Identities=25% Similarity=0.350 Sum_probs=59.3
Q ss_pred cceEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEcC--CHHHHHHHHhcCCCCCEE-EEEEEECCeEE--E
Q 013014 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCKVGDEL-LLQGIKQPPVL--S 424 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i~--~~~dl~~~l~~~~~g~~v-~l~v~R~g~~~--~ 424 (451)
.|++|..|.+++||+++||++ ||+|++|||+.|. ++.++..++... |+.+ .++|.|+|+.. +
T Consensus 33 ~gv~V~~V~~gSpA~~aGL~~-----------GD~Il~VNG~~V~~~s~~dl~~~l~~~--g~~v~~l~V~R~g~~~~~~ 99 (216)
T 2krg_A 33 PGQFIRSVDPDSPAEASGLRA-----------QDRIVEVNGVCMEGKQHGDVVSAIRAG--GDETKLLVVDRETDEFFKK 99 (216)
T ss_dssp CSCBEEEECTTSHHHHHTCCT-----------TCBCCEETTEECTTCCTHHHHHHHHHH--CSEEEEEECCHHHHHHHHH
T ss_pred CCeEEEEeCCCChHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhc--CCeEEEEEEEECCEEEEEE
Confidence 489999999999999999999 9999999999999 999999988764 8889 99999999876 5
Q ss_pred EEEEe
Q 013014 425 DNLRL 429 (451)
Q Consensus 425 ~~v~l 429 (451)
++++.
T Consensus 100 v~v~p 104 (216)
T 2krg_A 100 CRVIP 104 (216)
T ss_dssp HTCCC
T ss_pred EEEEE
Confidence 55544
No 309
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=98.23 E-value=1.1e-06 Score=80.65 Aligned_cols=58 Identities=19% Similarity=0.254 Sum_probs=50.9
Q ss_pred cceEEEecCCCCcccccC-ceeeecccCCCCCCCcEEEEECCEEcCCH--HHHHHHHhcCCCCCEEEEEEEECC
Q 013014 350 SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVGDELLLQGIKQP 420 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aG-l~~~~~~~~~~L~~GDiIl~vnG~~i~~~--~dl~~~l~~~~~g~~v~l~v~R~g 420 (451)
.|++|.+|.++++|+++| |++ ||+|++|||++|.++ .++..++.. .++.+.|+|.|..
T Consensus 136 ~gv~V~~V~~gs~A~~aG~L~~-----------GD~Il~VNg~~v~~~~~~~~~~~l~~--~~~~v~L~V~R~~ 196 (206)
T 3r0h_A 136 IGCTIADLIQGQYPEIDSKLQR-----------GDIITKFNGDALEGLPFQVCYALFKG--ANGKVSMEVTRPK 196 (206)
T ss_dssp SCEEEEEECTTSCHHHHHHCCT-----------TCEEEEETTEECTTCCHHHHHHHHHT--CCSEEEEEEEEEC
T ss_pred ceEEEEEECCCChHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEeCC
Confidence 689999999999999999 999 999999999999966 677777764 4679999999853
No 310
>1ufx_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.20 E-value=7e-07 Score=73.27 Aligned_cols=61 Identities=21% Similarity=0.247 Sum_probs=52.1
Q ss_pred cceEEEecCCCCcccccC-ceeeecccCCCCCCCcEEEEECCEEcCC--HHHHHHHHhcC---CCCCEEEEEEEECCe
Q 013014 350 SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQC---KVGDELLLQGIKQPP 421 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aG-l~~~~~~~~~~L~~GDiIl~vnG~~i~~--~~dl~~~l~~~---~~g~~v~l~v~R~g~ 421 (451)
.+++|..|.+++||+++| |++ ||.|++|||+++.+ ++++.++|... ..++.++++|.|.++
T Consensus 32 ~~~~I~~v~~~s~A~~aG~L~~-----------GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~~~~~i~l~v~r~~~ 98 (103)
T 1ufx_A 32 PLPRIVTIQRGGSAHNCGQLKV-----------GHVILEVNGLTLRGKEHREAARIIAEAFKTKDRDYIDFLVTEFNS 98 (103)
T ss_dssp SSCEEEEECTTSHHHHHCSSCT-----------TCBCCEETTEECTTCBHHHHHHHHHHHHHCSSCSEEEEEECCCCC
T ss_pred CcEEEEEeCCCChHHHCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHHhcccCCCCeEEEEEEEccc
Confidence 345899999999999999 999 99999999999976 88888887652 357899999998764
No 311
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=98.17 E-value=2.6e-06 Score=66.85 Aligned_cols=53 Identities=23% Similarity=0.327 Sum_probs=45.4
Q ss_pred EEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEcCCH--HHHHHHHhcCCCCCEEEEEEEE
Q 013014 353 LVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVGDELLLQGIK 418 (451)
Q Consensus 353 ~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i~~~--~dl~~~l~~~~~g~~v~l~v~R 418 (451)
.|..+.+++||+++||++ ||+|++|||+.+... +++.++|. ..|.+|+++|..
T Consensus 26 ~I~~v~~gspA~~aGl~~-----------GD~Il~VNG~~v~~~~~~evv~llr--~~g~~V~L~v~p 80 (82)
T 1r6j_A 26 KITSIVKDSSAARNGLLT-----------EHNICEINGQNVIGLKDSQIADILS--TSGTVVTITIMP 80 (82)
T ss_dssp EEEEECTTSHHHHHTCCS-----------SEEEEEETTEECTTCCHHHHHHHHH--HSCSEEEEEEEE
T ss_pred EEEEecCCCHHHHcCCCC-----------CCEEEEECCEEcCCCCHHHHHHHHh--cCCCEEEEEEEe
Confidence 378899999999999999 999999999999654 57777776 368899998864
No 312
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=98.14 E-value=9.6e-07 Score=89.60 Aligned_cols=68 Identities=26% Similarity=0.395 Sum_probs=57.3
Q ss_pred cceEEEecCCCCcccccC-ceeeecccCCCCCCCcEEEEECCEEcCCH--HHHHHHHhcCCCCCEEEEEEEECCeEEEEE
Q 013014 350 SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVGDELLLQGIKQPPVLSDN 426 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aG-l~~~~~~~~~~L~~GDiIl~vnG~~i~~~--~dl~~~l~~~~~g~~v~l~v~R~g~~~~~~ 426 (451)
.|++|.+|.++|||+++| |++ ||+|++|||+++.++ .++..++.....+++++++|.|+++..+++
T Consensus 232 ~g~~V~~V~~gspA~~aG~L~~-----------GD~Il~VnG~~v~~~~~~~~~~~l~~~~~~~~v~l~v~r~~~~~~v~ 300 (388)
T 3suz_A 232 PTVILANMMNGGPAARSGKLSI-----------GDQIMSINGTSLVGLPLATCQGIIKGLKNQTQVKLNIVSCPPVTTVL 300 (388)
T ss_dssp CCCBCCCCCCSSHHHHTCCCCT-----------TCEEEEETTEECSSCCSTTHHHHTTTCTTCSCEEEEEEECCSCC---
T ss_pred CCEEEEeeCCCCHHHHcCCCCC-----------CCEEEEECCEEccCCCHHHHHHHHHhccCCCccccccccccccceee
Confidence 468999999999999999 999 999999999999998 688888877667888999999999887776
Q ss_pred EE
Q 013014 427 LR 428 (451)
Q Consensus 427 v~ 428 (451)
+.
T Consensus 301 l~ 302 (388)
T 3suz_A 301 IK 302 (388)
T ss_dssp --
T ss_pred Ee
Confidence 64
No 313
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=98.09 E-value=4.2e-07 Score=93.95 Aligned_cols=65 Identities=28% Similarity=0.371 Sum_probs=0.0
Q ss_pred cceEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEcCCHHHHHHHHhcCCCCCEEEEEEEECCeEEEEEE
Q 013014 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDELLLQGIKQPPVLSDNL 427 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i~~~~dl~~~l~~~~~g~~v~l~v~R~g~~~~~~v 427 (451)
.|++|.+|.+++||+++||++ ||+|++|||++|.+++|+.+++... .+ .+.++|.|+|+.+++++
T Consensus 383 ~gv~V~~V~~gspA~~aGL~~-----------GDiI~~vng~~v~~~~~l~~~l~~~-~~-~v~l~v~R~g~~~~~~l 447 (448)
T 1ky9_A 383 QGVVVNNVKTGTPAAQIGLKK-----------GDVIIGANQQAVKNIAELRKVLDSK-PS-VLALNIQRGDSTIYLLM 447 (448)
T ss_dssp ------------------------------------------------------------------------------
T ss_pred CeEEEEEecCCCHHHHcCCCC-----------CCEEEEECCEECCCHHHHHHHHHcC-CC-eEEEEEEECCEEEEEEe
Confidence 589999999999999999999 9999999999999999999988763 34 89999999998877665
No 314
>3k50_A Putative S41 protease; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=98.04 E-value=1.8e-06 Score=87.86 Aligned_cols=58 Identities=24% Similarity=0.299 Sum_probs=50.7
Q ss_pred ceEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEcCCHHHHHHHHhcCCCCCEEEEEEEECCeE
Q 013014 351 GVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDELLLQGIKQPPV 422 (451)
Q Consensus 351 Gv~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i~~~~dl~~~l~~~~~g~~v~l~v~R~g~~ 422 (451)
.++|..|.++|||++|||++ ||+|++|||++|.+++ +.+++.. +|+++++++.|+|+.
T Consensus 91 ~~~V~~V~~gsPA~~AGL~~-----------GD~I~~InG~~v~~~~-~~~~l~~--~g~~v~l~v~R~g~~ 148 (403)
T 3k50_A 91 NALISYVVPGSPAEEAGLQR-----------GHWIMMMNGDYITKKV-ESELLQG--STRQLQIGVYKEVVG 148 (403)
T ss_dssp EEEEEEECTTSHHHHTTCCT-----------TCEEEEETTBCBCTTT-GGGGTSC--SCEEEEEEEEEEEC-
T ss_pred eEEEEEeCCCChHHHcCCCC-----------CCEEEEECCEEccchh-HHHHhhC--CCCEEEEEEEeCCcc
Confidence 37899999999999999999 9999999999999985 6655554 799999999998864
No 315
>2lob_A Golgi-associated PDZ and coiled-coil motif-contai protein; structural protein-hydrolase complex, peptide binding protei; NMR {Homo sapiens}
Probab=97.31 E-value=5.9e-07 Score=74.92 Aligned_cols=55 Identities=29% Similarity=0.478 Sum_probs=45.3
Q ss_pred cceEEEecCCCCcccc-cCceeeecccCCCCCCCcEEEEECCEEcC--CHHHHHHHHhcCCCCCEEEEEEE
Q 013014 350 SGVLVLDAPPNGPAGK-AGLLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCKVGDELLLQGI 417 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~-aGl~~~~~~~~~~L~~GDiIl~vnG~~i~--~~~dl~~~l~~~~~g~~v~l~v~ 417 (451)
.|++|.+|.++|||++ +||++ ||+|++|||++|. ++.++..++.. .+++++++|.
T Consensus 53 ~gv~V~~V~~~spA~~~aGL~~-----------GD~Il~ING~~v~~~~~~~~~~~l~~--~~~~v~l~V~ 110 (112)
T 2lob_A 53 VPILISEIHPGQPADRCGGLHV-----------GDAILAVNGVNLRDTKHKEAVTILSQ--QRGEIEFEVV 110 (112)
Confidence 4789999999999999 99999 9999999999994 46777776653 4555777664
No 316
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=97.97 E-value=4.7e-06 Score=79.81 Aligned_cols=60 Identities=27% Similarity=0.356 Sum_probs=52.6
Q ss_pred cceEEEecCCCCcccc-cCceeeecccCCCCCCCcEEEEECCEEcCCH--HHHHHHHhcCCCCCEEEEEEEECCeE
Q 013014 350 SGVLVLDAPPNGPAGK-AGLLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVGDELLLQGIKQPPV 422 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~-aGl~~~~~~~~~~L~~GDiIl~vnG~~i~~~--~dl~~~l~~~~~g~~v~l~v~R~g~~ 422 (451)
.|++|.+|.+++||++ +||++ ||+|++|||+.|.++ .++..++.. .|++|+|+|.|.++.
T Consensus 103 ~gi~V~~V~~gspA~~~aGL~~-----------GD~Il~VNG~~v~~~t~~e~v~~l~~--~g~~V~L~V~R~~~~ 165 (263)
T 1z87_A 103 MPILISKIFKGLAADQTEALFV-----------GDAILSVNGEDLSSATHDEAVQALKK--TGKEVVLEVKYMKEV 165 (263)
T ss_dssp EEEEEEECCTTSHHHHCTTCCS-----------SCEEEEESSCBCTTSCHHHHHHHHHH--CCSCCCEEEECCSSS
T ss_pred CCEEEEEECCCCHHHHhCCCCC-----------CCEEEEECCEECCCcCHHHHHHHHhc--CCCeEEEEEEeCccc
Confidence 5899999999999999 79999 999999999999985 677777776 378899999997653
No 317
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=97.73 E-value=2.9e-05 Score=84.89 Aligned_cols=68 Identities=24% Similarity=0.332 Sum_probs=55.8
Q ss_pred cceEEEecCCCCcccccC-ceeeecccCCCCCCCcEEEEECCEEcCCH--HHHHHHHhcCCCCCEEEEEEEECCeE--EE
Q 013014 350 SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVGDELLLQGIKQPPV--LS 424 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aG-l~~~~~~~~~~L~~GDiIl~vnG~~i~~~--~dl~~~l~~~~~g~~v~l~v~R~g~~--~~ 424 (451)
.|++|.+|.+++||+++| |+. ||+|++|||+.+.++ .++..++. ..|++|+++|.|+++. ..
T Consensus 89 ~g~~V~~v~~gspA~~aG~L~~-----------GD~Il~Vng~~v~~~~~~~~~~~l~--~~g~~v~l~v~R~~~~~~~~ 155 (721)
T 2xkx_A 89 PSIFITKIIPGGAAAQDGRLRV-----------NDSILFVNEVDVREVTHSAAVEALK--EAGSIVRLYVMRRKPPAEKV 155 (721)
T ss_pred CCeEEEEeCCCCHHHhcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHhh--ccccccceEEEecccccccc
Confidence 689999999999999999 999 999999999999998 45555554 3689999999999854 23
Q ss_pred EEEEee
Q 013014 425 DNLRLL 430 (451)
Q Consensus 425 ~~v~l~ 430 (451)
+++++.
T Consensus 156 ~~v~l~ 161 (721)
T 2xkx_A 156 MEIKLI 161 (721)
T ss_pred eeeeee
Confidence 444443
No 318
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=97.71 E-value=6.8e-05 Score=60.24 Aligned_cols=73 Identities=21% Similarity=0.319 Sum_probs=56.7
Q ss_pred ccccceeccchhhhhhCccceEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEcCCH--HHHHHHHhcCCCC
Q 013014 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVG 409 (451)
Q Consensus 332 ~~lGi~~~~~~~~~~~~~~Gv~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i~~~--~dl~~~l~~~~~g 409 (451)
.-||+++... +....+|..+.++++|++.|. |++||.|++|||+.+..+ .++.++|.+...|
T Consensus 16 ~~LG~tI~~~------g~g~~~I~rI~~gg~a~r~g~----------L~vGD~I~~VNG~~v~g~~h~evv~lLk~~~~g 79 (95)
T 3gge_A 16 DSLGLTITDN------GVGYAFIKRIKDGGVIDSVKT----------ICVGDHIESINGENIVGWRHYDVAKKLKELKKE 79 (95)
T ss_dssp SCCCEEEECS------SSSCCEEEEECTTSHHHHCTT----------CCTTCEEEEETTEECTTCCHHHHHHHHHHSCTT
T ss_pred CCceEEEEcC------CCCcEEEEEEcCCChHHhcCC----------CCCCCEEEEECCEEccCCCHHHHHHHHHhCCCC
Confidence 3566666431 123478999999999998752 344999999999999776 6999999998889
Q ss_pred CEEEEEEEECC
Q 013014 410 DELLLQGIKQP 420 (451)
Q Consensus 410 ~~v~l~v~R~g 420 (451)
.+++|++.+--
T Consensus 80 ~~~~L~lv~p~ 90 (95)
T 3gge_A 80 ELFTMKLIEPK 90 (95)
T ss_dssp CEEEEEEEEEC
T ss_pred CEEEEEEECcc
Confidence 99999988743
No 319
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=97.70 E-value=3.2e-06 Score=75.18 Aligned_cols=55 Identities=16% Similarity=0.173 Sum_probs=42.7
Q ss_pred EEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEcCCHHHHHHHHhcCCCCCEEEEEEEECCeEEEEEEEe
Q 013014 353 LVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDELLLQGIKQPPVLSDNLRL 429 (451)
Q Consensus 353 ~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i~~~~dl~~~l~~~~~g~~v~l~v~R~g~~~~~~v~l 429 (451)
+|.++.+++||+++||++ ||+|++|||+++.++. ++++.+++.|+|+..++++++
T Consensus 110 ~v~~v~~~s~a~~aGl~~-----------GD~I~~ing~~v~~~~-----------~~~v~~~v~r~g~~~~l~v~~ 164 (166)
T 1w9e_A 110 KITSIVKDSSAARNGLLT-----------EHNICEINGQNVIGLK-----------DSQIADILSTSGTVVTITIMP 164 (166)
T ss_dssp EEEEECTTSHHHHTTCCS-----------SEEEEEETTEECTTCC-----------HHHHHHHHHHSCSEEEEEEEE
T ss_pred EEEEEccCCHHHHcCCCC-----------CCEEEEECCEECCCCC-----------hHHHHHHHhhCCCEEEEEEEE
Confidence 789999999999999999 9999999999999983 233344455666655555553
No 320
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=97.68 E-value=3.6e-05 Score=84.10 Aligned_cols=63 Identities=25% Similarity=0.246 Sum_probs=54.6
Q ss_pred ccceEEEecCCCCcccccC-ceeeecccCCCCCCCcEEEEECCEEcCCH--HHHHHHHhcCCCCCEEEEEEEECCeEEE
Q 013014 349 VSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVGDELLLQGIKQPPVLS 424 (451)
Q Consensus 349 ~~Gv~V~~v~~~s~a~~aG-l~~~~~~~~~~L~~GDiIl~vnG~~i~~~--~dl~~~l~~~~~g~~v~l~v~R~g~~~~ 424 (451)
..|++|.+|.++++|+++| |++ ||+|++|||++|.++ .++..++.. .|+.+.++|.|+|+...
T Consensus 183 ~~gv~V~~V~~gs~A~~aG~L~~-----------GD~Il~Vng~~v~~~~~~~~~~~l~~--~~~~v~l~V~R~g~~~~ 248 (721)
T 2xkx_A 183 DNSIYVTKIIEGGAAHKDGRLQI-----------GDKILAVNSVGLEDVMHEDAVAALKN--TYDVVYLKVAKPSNAYL 248 (721)
T ss_pred CCceEEEEeCCCCchhhcCCCCC-----------CCEEEEECCeeCCCCCHHHHHHHHHc--CCCeEEEEEEeCCcccc
Confidence 3799999999999999999 999 999999999999996 466666654 47899999999997653
No 321
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=97.68 E-value=5.8e-05 Score=85.52 Aligned_cols=69 Identities=22% Similarity=0.329 Sum_probs=57.6
Q ss_pred cceEEEecCCC--------CcccccCceeeecccCCCCCCCcEEEEECCEEcCCHHHHHHHHhcCCCCCEEEEEEEECC-
Q 013014 350 SGVLVLDAPPN--------GPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDELLLQGIKQP- 420 (451)
Q Consensus 350 ~Gv~V~~v~~~--------s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i~~~~dl~~~l~~~~~g~~v~l~v~R~g- 420 (451)
.+++|.++.++ +||+++|++ |+ ||+|++|||++|.++.++...+.. ++|++|+++|.|+|
T Consensus 748 ~~~~v~~v~~~~~~~~~~~spa~~ag~~---------l~-GD~I~~i~g~~~~~~~~~~~~~~~-~~g~~v~l~v~r~~~ 816 (1045)
T 1k32_A 748 DHYVVAKAYAGDYSNEGEKSPIFEYGID---------PT-GYLIEDIDGETVGAGSNIYRVLSE-KAGTSARIRLSGKGG 816 (1045)
T ss_dssp TEEEEEEECBSCTTSTTCBCGGGGGTCC---------CT-TCEEEEETTEECBTTBCHHHHHHT-TTTSEEEEEEECSSS
T ss_pred CEEEEEEecCCCcccccCCChHHHCCCC---------cC-CCEEEEECCEEccchhhHHHhhcC-CCCCEEEEEEECCCC
Confidence 57889999887 999999832 34 999999999999999888888876 68999999999988
Q ss_pred eEEEEEEEe
Q 013014 421 PVLSDNLRL 429 (451)
Q Consensus 421 ~~~~~~v~l 429 (451)
+.++++++.
T Consensus 817 ~~~~~~~~~ 825 (1045)
T 1k32_A 817 DKRDLMIDI 825 (1045)
T ss_dssp CEEEEEEEC
T ss_pred ceEEEEEEE
Confidence 455666663
No 322
>3qzr_A 3C protein; chymotrypsin-fold, beta-ribbon, hydrolysis, nucleus, hydrola hydrolase inhibitor complex; HET: AG7; 1.04A {Human enterovirus 71} SCOP: b.47.1.0 PDB: 3osy_A 3qzq_A* 3r0f_A* 3sjo_A* 3sjk_A 3sji_A* 3sj8_A* 3sj9_A
Probab=97.64 E-value=0.014 Score=52.42 Aligned_cols=157 Identities=15% Similarity=0.217 Sum_probs=93.2
Q ss_pred CCceEEEEeeeeccCccccccccccCeEEEEEEEcCCCeEEecccccCCCCcEEEEeCCCcEEEEEEE--EEcC---CCC
Q 013014 126 TPSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDAKIV--GFDQ---DKD 200 (451)
Q Consensus 126 ~~SVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHVv~~~~~i~V~~~dg~~~~a~vv--~~d~---~~D 200 (451)
++-++.|++. .+.-||+-|-.+ ..|-..|... .+.+.| ||+.++..-. -.|. ..|
T Consensus 16 ~~N~~~vtt~---------------~g~ft~LgI~dr-~~vvP~Ha~~-~~~i~i---~g~~~~v~d~~~L~~~~g~~~E 75 (187)
T 3qzr_A 16 RRNVRQVQTD---------------QGHFTMLGVRDR-LAVLPRHSQP-GKTIWI---EHKLVNVLDAVELVDEQGVNLA 75 (187)
T ss_dssp HHHEEEEEET---------------TEEEEEEEEEBT-EEEEEGGGCC-CSEEEE---TTEEEEEEEEEECCCTTCCCCS
T ss_pred HcCeEEEEEC---------------CCeEEEEEEeee-EEEEeCCCCC-CCEEEE---CCEEEEeeeeEEEECCCCCEEE
Confidence 3448888762 344588888644 8999999833 344333 6766664211 1122 369
Q ss_pred EEEEEEcCCCCCCcceecCCCCCCCCCcEEEEeeCCCCCCC-ceEEeEEeeeeeeeccCCCCCCcccEEEEcccCCCCCC
Q 013014 201 VAVLRIDAPKDKLRPIPIGVSADLLVGQKVYAIGNPFGLDH-TLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNS 279 (451)
Q Consensus 201 lAlLkv~~~~~~~~~l~l~~s~~~~~G~~V~~iG~p~g~~~-~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~S 279 (451)
|++++++.. +++.-+.---.++...-..+..+-+...... .+..|.+...... .. .+......+.++++...|+=
T Consensus 76 lt~v~l~~~-~kfRDIrkfi~~~~~~~~~~~L~~ns~~~~~~~~~vG~v~~~g~i-nl--sg~~t~r~l~Y~~pTk~G~C 151 (187)
T 3qzr_A 76 LTLITLDTN-EKFRDITKFIPENISTASDATLVINTEHMPSMFVPVGDVVQYGFL-NL--SGKPTHRTMMYNFPTKAGQC 151 (187)
T ss_dssp EEEEEECSS-CCBCCCGGGSCSSCCCEEEEEEEECCSSSCSEEEEEEEEEEEEEE-EE--TTEEEEEEEEESSCCCTTCT
T ss_pred EEEEEcCCC-ccccchHHhCccCcCCCCceEEEEEcCCCcceEEEeccEEEeceE-eC--CCCccccEEEECCCCCCCcc
Confidence 999999854 3455443211122222223444444333322 3344655543322 11 12234678999999999999
Q ss_pred CCceeCCCceEEEEEeeeeCCCCCccceeEEEec
Q 013014 280 GGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPV 313 (451)
Q Consensus 280 GGPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~ 313 (451)
||+|+. .|+++||+.++ ....||+.++
T Consensus 152 Ggvl~~-~gkIiGIHvaG------nG~~G~~a~L 178 (187)
T 3qzr_A 152 GGVVTS-VGKIIGIHIGG------NGRQGFCAGL 178 (187)
T ss_dssp TCEEEE-TTEEEEEEEEE------CSSCEEEEEC
T ss_pred CCeEEe-cCcEEEEEECC------CCCcEEEEEe
Confidence 999996 89999999986 2346777665
No 323
>3zve_A 3C protease; hydrolase, michael inhibitor; HET: G84; 1.80A {Human enterovirus} PDB: 3zv8_A* 3zva_A* 3zvb_A* 3zv9_A* 3zvd_A* 3zvc_A* 3zvf_A* 3zvg_A*
Probab=97.58 E-value=0.018 Score=52.00 Aligned_cols=147 Identities=16% Similarity=0.215 Sum_probs=84.4
Q ss_pred CeEEEEEEEcCCCeEEecccccCCCCcEEEEeCCCcEEEEE--EEEEcC---CCCEEEEEEcCCCCCCccee-cCCCCCC
Q 013014 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDAK--IVGFDQ---DKDVAVLRIDAPKDKLRPIP-IGVSADL 224 (451)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHVv~~~~~i~V~~~dg~~~~a~--vv~~d~---~~DlAlLkv~~~~~~~~~l~-l~~s~~~ 224 (451)
.+.-||..|-.+ ++|.+.|...+ +.+.| +|+.++.. ....|. ..||++++++.. +++.-+. +-.+...
T Consensus 22 ~G~ft~LgI~dr-~~lvP~Ha~~~-~ti~i---~g~~~~v~d~~~l~~~~~~~~Dlt~v~l~~~-~kFRDIr~~~~~~~~ 95 (190)
T 3zve_A 22 KGEFTMLGVHDR-VAVIPTHASVG-ETIYI---NDVETKVLDACALRDLTDTNLEITIVKLDRN-QKFRDIRHFLPRYED 95 (190)
T ss_dssp TEEEEEEEEEBT-EEEEEGGGCCC-SEEEE---TTEEEEEEEEEEEECTTCCEEEEEEEEECCS-SCBCCCGGGSCSSCC
T ss_pred CEEEEEEEEeCC-EEEEecCCCCC-cEEEE---CCEEEEeeEEEEEEcCCCCeEEEEEEEcCCC-cccCchHHhccccCC
Confidence 345678888655 99999996543 33332 45443322 112233 349999999854 3454442 1112222
Q ss_pred CCCcEEEEeeCCCCCCCceEEeEEeeeeeeeccCCCCCCcccEEEEcccCCCCCCCCceeCCCceEEEEEeeeeCCCCCc
Q 013014 225 LVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGSLIGINTAIYSPSGAS 304 (451)
Q Consensus 225 ~~G~~V~~iG~p~g~~~~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~~~~ 304 (451)
...+.++++-.+.........|.+........ .+......+.++++..+|+=||||+. +|+++||+.++ .
T Consensus 96 ~~~~~~l~i~s~~~~~~~~~v~~v~~~~~i~l---~g~~~~~~~~Y~~pT~~G~CG~~li~-~gkI~GiHvaG------~ 165 (190)
T 3zve_A 96 DYNDAVLSVHTSKFPNMYIPVGQVTNYGFLNL---GGTPTHRILMYNFPTRAGQCGGVVTT-TGKVIGIHVGG------N 165 (190)
T ss_dssp CEEEEEEEECSSSCSSEEEEEEEEEEEEEEEE---TTEEEEEEEEESSCCCTTCTTCEEEE-TTEEEEEEEEE------C
T ss_pred CCCCeEEEEECCCCcceEEecccceEeceeec---CCCeeeeeEEEecCCCCCccCCeEEE-CCCEEEEEECc------C
Confidence 33455555543322222233344443332211 23344678899999999999999995 78999999986 2
Q ss_pred cceeEEEec
Q 013014 305 SGVGFSIPV 313 (451)
Q Consensus 305 ~~~~~aIP~ 313 (451)
...||+.++
T Consensus 166 G~~g~~~~l 174 (190)
T 3zve_A 166 GAQGFAAML 174 (190)
T ss_dssp SSCEEEEEC
T ss_pred CCceEehhh
Confidence 345777554
No 324
>3q3y_A HEVB EV93 3C protease; cysteine trypsin-like protease, 3C cysteine protease (picorn antiviral compound 1 (AG7404); HET: XNV; 1.32A {Human enterovirus B} SCOP: b.47.1.4 PDB: 3q3x_A* 3ruo_A* 3zyd_A 3zz5_A* 3zz6_A* 3zz7_A* 3zz8_A* 3zz9_A* 3zza_A* 3zzb_A* 2ztx_A 2vb0_A 2zty_A 2ztz_A 2zu3_A* 3zye_A 3zz3_A 2zu1_A 3zz4_A 3zzc_A* ...
Probab=97.51 E-value=0.019 Score=51.60 Aligned_cols=157 Identities=15% Similarity=0.218 Sum_probs=92.2
Q ss_pred CCceEEEEeeeeccCccccccccccCeEEEEEEEcCCCeEEecccccCCCCcEEEEeCCCcEEEEE--EEEEcCC---CC
Q 013014 126 TPSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDAK--IVGFDQD---KD 200 (451)
Q Consensus 126 ~~SVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHVv~~~~~i~V~~~dg~~~~a~--vv~~d~~---~D 200 (451)
++.++.|++ ..+.-||.-|-.+ ..|-..|.- ..+.+.| ||+.++.. ..-.|.+ .|
T Consensus 14 k~N~~~vtT---------------~~G~ft~LgI~dr-~~vvPtHa~-~~~~i~i---~G~~~~v~d~~~L~~~~g~~lE 73 (191)
T 3q3y_A 14 KRNASTVKT---------------EYGEFTMLGIYDR-WAVLPRHAK-PGPTILM---NDQEVGVLDAKELVDKDGTNLE 73 (191)
T ss_dssp HHHEEEEEE---------------TTEEEEEEEEEBT-EEEEEGGGC-CCSEEEE---TTEEEEEEEEEEEECTTCCEEE
T ss_pred HcCeEEEEE---------------CCCcEEEEEEece-EEEEECCCC-CCCEEEE---CCEEEEeeeEEEEEcCCCCEEE
Confidence 445787876 2344588888544 888899983 3344333 67776642 1122333 49
Q ss_pred EEEEEEcCCCCCCcceecCCCCCCCCCcEEEEeeCCCCCCC-ceEEeEEeeeeeeeccCCCCCCcccEEEEcccCCCCCC
Q 013014 201 VAVLRIDAPKDKLRPIPIGVSADLLVGQKVYAIGNPFGLDH-TLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNS 279 (451)
Q Consensus 201 lAlLkv~~~~~~~~~l~l~~s~~~~~G~~V~~iG~p~g~~~-~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~S 279 (451)
|++|+++.. ++++-+.---.+..........+-+...... .+..|.+...... .. .+......+.++++...|+=
T Consensus 74 lt~v~l~~~-~kFRDIrkfi~~~~~~~~~~~Lv~ns~~~p~~~~~vG~v~~~g~i-nl--sg~~t~r~l~Y~~pTk~G~C 149 (191)
T 3q3y_A 74 LTLLKLNRN-EKFRDIRGFLAREEVEVNEAVLAINTSKFPNMYIPVGQVTDYGFL-NL--GGTPTKRMLVYNFPTRAGQC 149 (191)
T ss_dssp EEEEEEECS-SCBCCCGGGBCSSCCCEEEEEEEECSSSSTTEEEEEEEEEEEEEE-EE--TTEEEEEEEEEESCCCTTCT
T ss_pred EEEEECCCC-ccccchHHhcccccccCCceEEEEEcCCCcceEEEeccEEEcceE-eC--CCCcccCEEEecCCCCCCcc
Confidence 999999854 3555543211222333323333333323222 3344655543221 11 12234678999999999999
Q ss_pred CCceeCCCceEEEEEeeeeCCCCCccceeEEEec
Q 013014 280 GGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPV 313 (451)
Q Consensus 280 GGPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~ 313 (451)
||+|+. .|+++||++++ ....||+.++
T Consensus 150 GgvL~~-~gkIiGIHvgG------nG~~Gfaa~L 176 (191)
T 3q3y_A 150 GGVLMS-TGKVLGIHVGG------NGHQGFSAAL 176 (191)
T ss_dssp TCEEEE-TTEEEEEEEEE------ETTEEEEEEC
T ss_pred CCEEEe-CCCEEEEEECC------CCcceEEeeh
Confidence 999995 78999999986 3356777654
No 325
>4dcd_A Protease 3C, genome polyprotein; antiviral inhibitors, dipeptidyl inhib hydrolase-hydrolase inhibitor complex; HET: K36; 1.69A {Human poliovirus 1} PDB: 1l1n_A
Probab=97.50 E-value=0.03 Score=50.40 Aligned_cols=147 Identities=15% Similarity=0.201 Sum_probs=85.2
Q ss_pred CeEEEEEEEcCCCeEEecccccCCCCcEEEEeCCCcEEEEE--EEEEcCC---CCEEEEEEcCCCCCCcceecCCCCCCC
Q 013014 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDAK--IVGFDQD---KDVAVLRIDAPKDKLRPIPIGVSADLL 225 (451)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHVv~~~~~i~V~~~dg~~~~a~--vv~~d~~---~DlAlLkv~~~~~~~~~l~l~~s~~~~ 225 (451)
.+.-||.-|-.+ +.|-..|.. ..+.+.| +|+.++.. ....+.+ .||++++++.. +++.-+.=--.+...
T Consensus 29 ~G~ft~LgI~d~-~~viP~Ha~-p~~~i~i---~G~~~~v~d~~~l~~~~gv~lElt~V~l~r~-~kFRDIr~fi~~~~~ 102 (190)
T 4dcd_A 29 KGEFTMLGVHDN-VAILPTHAS-PGESIVI---DGKEVEILDAKALEDQAGTNLEITIITLKRN-EKFRDIRPHIPTQIT 102 (190)
T ss_dssp TEEEEEEEEEBT-EEEEEGGGC-CCSEEEE---TTEEEEEEEEEEEECTTCCEEEEEEEEESSS-CCBCCCGGGSCSSCC
T ss_pred CeEEEEEEEECc-EEEEeCCCC-CCcEEEE---CCEEEEeeEEEEEecCCCCeEEEEEEEcCCC-ccccchhHhccccCC
Confidence 345688888654 999999943 3344443 56655432 1223332 49999999864 355554311111122
Q ss_pred CCcEEEEeeCCCCCCC-ceEEeEEeeeeeeeccCCCCCCcccEEEEcccCCCCCCCCceeCCCceEEEEEeeeeCCCCCc
Q 013014 226 VGQKVYAIGNPFGLDH-TLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGSLIGINTAIYSPSGAS 304 (451)
Q Consensus 226 ~G~~V~~iG~p~g~~~-~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~~~~ 304 (451)
....+..+=+-..... .+..|.+........ .+......+.++++..+|+=||||+. +|+++||+.++ .
T Consensus 103 ~~~~~~L~vn~~~~~~~~~~vg~v~~~g~i~l---sg~~t~r~l~Y~~pT~~G~CGg~l~~-~gkIlGIHvaG------~ 172 (190)
T 4dcd_A 103 ETNDGVLIVNTSKYPNMYVPVGAVTEQGYLNL---GGRQTARTLMYNFPTRAGQCGGVITC-TGKVIGMHVGG------N 172 (190)
T ss_dssp CEEEEEEEECSSSSTTEEEEEEEEEEEEEEEE---TTEEEEEEEEESSCCCTTCTTCEEEE-TTEEEEEEEEE------C
T ss_pred CCCceEEEEecCCCccEEEEeeeeEEeccccC---CCCcccceEEEccCCCCCccCCEEEe-CCCEEEEEECC------C
Confidence 2333433322222222 233444443333211 23445678899999999999999995 78999999986 2
Q ss_pred cceeEEEec
Q 013014 305 SGVGFSIPV 313 (451)
Q Consensus 305 ~~~~~aIP~ 313 (451)
...||+.++
T Consensus 173 G~~G~aa~L 181 (190)
T 4dcd_A 173 GSHGFAAAL 181 (190)
T ss_dssp SSCEEEEEC
T ss_pred CCceEeeeh
Confidence 345777544
No 326
>2hal_A Hepatitis A protease 3C; 3C protease, inhibitor design; HET: BBL; 1.35A {Hepatitis a virus} SCOP: b.47.1.4 PDB: 2h6m_A* 2h9h_A* 2cxv_A* 2a4o_A* 1hav_A 1qa7_A*
Probab=97.46 E-value=0.0021 Score=59.43 Aligned_cols=172 Identities=14% Similarity=0.129 Sum_probs=95.5
Q ss_pred HHHHHhCCceEEEEeeeeccCccccccccccCeEEEEEEEcCCCeEEecccccCCCC---cE--EEEeCCCcEEEEE---
Q 013014 120 RLFQENTPSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKGHVVTNYHVIRGAS---DI--RVTFADQSAYDAK--- 191 (451)
Q Consensus 120 ~~~~~~~~SVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHVv~~~~---~i--~V~~~dg~~~~a~--- 191 (451)
++...+.+-.|+|.....++. ....++|..|..+ ..|...|...... .+ .+.. +|+.|+..
T Consensus 4 ~i~~~v~~N~~~i~~~~~~~~---------~~~~~t~LgI~~r-~~lvP~H~~~~~~~~~~~~~~i~i-~g~~~~~~~~~ 72 (212)
T 2hal_A 4 EIAGLVRKNLVQFGVGEKNGS---------VRWVMNALGVKDD-WLLVPSHAYKFEKDYEMMEFYFNR-GGTYYSISAGN 72 (212)
T ss_dssp HHHHHHHHHEEEEEEEETTSC---------CEEEEEEEEEEBT-EEEEEGGGTTTSTTGGGEEEEEEE-TTEEEEEEGGG
T ss_pred eehhhhhccEEEEEEeCCCCC---------cceEEEEEEEcCC-EEEEecccCcccccccccceEEEE-CCEEEeecccc
Confidence 455566666888877532221 1246899999765 9999999975322 22 2333 66666543
Q ss_pred --EEEEc-CCCCEEEEEEcCCCCCCccee--cCCCCC-CCCCc-EEEEeeCCCCCCCceEEe-----E-EeeeeeeeccC
Q 013014 192 --IVGFD-QDKDVAVLRIDAPKDKLRPIP--IGVSAD-LLVGQ-KVYAIGNPFGLDHTLTTG-----V-ISGLRREISSA 258 (451)
Q Consensus 192 --vv~~d-~~~DlAlLkv~~~~~~~~~l~--l~~s~~-~~~G~-~V~~iG~p~g~~~~~~~G-----~-Vs~~~~~~~~~ 258 (451)
+...| ...||++++++. ..+++.+. +.+..+ ...++ .+.+++...+.......+ . ++.. . ..
T Consensus 73 v~~~~~d~~~~Dl~lv~Lp~-~~~FrDIrk~f~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~-~-i~-- 147 (212)
T 2hal_A 73 VVIQSLDVGFQDVVLMKVPT-IPKFRDITQHFIKKGDVPRALNRLATLVTTVNGTPMLISEGPLKMEEKATYV-H-KK-- 147 (212)
T ss_dssp SEEECSSSSCCSEEEEECTT-SCCBCCCGGGBCCGGGGGGTTTSCEEEEEEETTEEEEEEECSCEEEEEEEEE-E-EC--
T ss_pred ceeEeccCCCceEEEEECCC-CCccCChhHhcCCcccccccccceEEEEeccCCCceEEecccccccceeeEE-E-ec--
Confidence 33333 367999999975 23444432 111111 22233 333332111111111111 1 1100 0 01
Q ss_pred CCCCCcc----cEEEEcccCCCCCCCCceeCC----CceEEEEEeeeeCCCCCccceeEEEec
Q 013014 259 ATGRPIQ----DVIQTDAAINPGNSGGPLLDS----SGSLIGINTAIYSPSGASSGVGFSIPV 313 (451)
Q Consensus 259 ~~~~~~~----~~i~~d~~i~~G~SGGPlvd~----~G~VVGI~s~~~~~~~~~~~~~~aIP~ 313 (451)
..+.... ..+.++++..+|+=||||+.. .|+++|||.++. .+.|||.++
T Consensus 148 ~~G~~~~~~~~~~~~Y~~pT~~G~CGs~li~~~~~~~~kIiGiHvaG~------g~~G~a~~l 204 (212)
T 2hal_A 148 NDGTTVDLTVDQAWRGKGEGLPGMCGGALVSSNQSIQNAILGIHVAGG------NSILVAKLV 204 (212)
T ss_dssp TTSCEEEEEEEEEEEEECCCCTTCTTCEEEESCGGGTTCEEEEEEEEE------TTEEEEEEC
T ss_pred CCCcccccccceEEEEecCCCCCcCCCeEEEccCCCCceEEEEEeCcC------CCcEEEEee
Confidence 1122222 678899999999999999874 799999999873 346788765
No 327
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=97.29 E-value=0.00046 Score=72.47 Aligned_cols=60 Identities=18% Similarity=0.170 Sum_probs=51.8
Q ss_pred cceEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEcCCHHHHHHHHhcCCCCCEEEEEEEECCeE
Q 013014 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDELLLQGIKQPPV 422 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i~~~~dl~~~l~~~~~g~~v~l~v~R~g~~ 422 (451)
.||+|.+|.+++++..+|++. ||+|++|||++|.|.+||.+++.+.+ ++.+.+++. +++.
T Consensus 415 ~gVvvs~V~~~s~a~~~g~~~-----------gdiI~~vNg~~V~s~~~l~~~l~~~k-~~~l~~~~~-~~~~ 474 (539)
T 4fln_A 415 QIVILSQVLANEVNIGYEDMN-----------NQQVLKFNGIPIRNIHHLAHLIDMCK-DKYLVFEFE-DNYV 474 (539)
T ss_dssp CCEEEEEECCCGGGTTCSSCC-----------SEEEEEETTEECCSHHHHHHHHHTCC-SSEEEEEET-TSCE
T ss_pred eEEEEEEecCCchhhhcCCCC-----------CCEEEeECCEEcCCHHHHHHHHHHcC-CCeEEEEEC-CCEE
Confidence 689999999999999999999 99999999999999999999998754 666666643 3443
No 328
>1cqq_A Type 2 rhinovirus 3C protease; viral protein, hydrolase; HET: AG7; 1.85A {Human rhinovirus 2} SCOP: b.47.1.4 PDB: 2xya_A*
Probab=97.10 E-value=0.082 Score=47.31 Aligned_cols=145 Identities=17% Similarity=0.219 Sum_probs=84.3
Q ss_pred eEEEEEEEcCCCeEEecccccCCCCcEEEEeCCCcEEEEE--EEEEcCC---CCEEEEEEcCCCCCCccee-cCCCCCCC
Q 013014 152 GSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDAK--IVGFDQD---KDVAVLRIDAPKDKLRPIP-IGVSADLL 225 (451)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHVv~~~~~i~V~~~dg~~~~a~--vv~~d~~---~DlAlLkv~~~~~~~~~l~-l~~s~~~~ 225 (451)
+.-++.-|..+ ..|-..|...+. . +.+ +|+.++.. ...+|++ .||++++++.. ++++-+. +-. +...
T Consensus 23 g~~t~Lgi~~~-~~lvP~Ha~~~~-~--i~i-~g~~v~i~d~~~l~d~~g~~~El~lv~l~~~-~kfrDi~kfip-~~~~ 95 (180)
T 1cqq_A 23 GKFTGLGVYDR-FVVVPTHADPGK-E--IQV-DGITTKVIDSYDLYNKNGIKLEITVLKLDRN-EKFRDIRRYIP-NNED 95 (180)
T ss_dssp EEEEEEEEEBT-EEEEEGGGCCCS-E--EEE-TTEEEEEEEEEEEECTTSCEEEEEEEEECSS-CCBCCGGGGSC-SSCC
T ss_pred CcEEEEEEeeE-EEEEccCcCccc-E--EEE-CCEEEEeccceEEEcCCCCeEEEEEEEcCCc-cccCccHhhcC-CCcC
Confidence 34677777655 899999988874 2 222 55554433 3334533 59999999754 3454443 111 1111
Q ss_pred CCcEEEEeeCCCCCCC-ceEEeEEeeeeeeeccCCCCCCcccEEEEcccCCCCCCCCceeCCCceEEEEEeeeeCCCCCc
Q 013014 226 VGQKVYAIGNPFGLDH-TLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGSLIGINTAIYSPSGAS 304 (451)
Q Consensus 226 ~G~~V~~iG~p~g~~~-~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~~~~ 304 (451)
.......+-+-..... .+..|.+........ .+......+.++++..+|+=||+|+. +|+++|||.++ .
T Consensus 96 ~~~~~~l~~n~~~~~~~~v~~g~~~~~g~i~~---~g~~~~r~l~Y~~pT~~G~CGsvl~~-~gkIiGIHvAG------~ 165 (180)
T 1cqq_A 96 DYPNCNLALLANQPEPTIINVGDVVSYGNILL---SGNQTARMLKYSYPTKSGYCGGVLYK-IGQVLGIHVGG------N 165 (180)
T ss_dssp CEEEEEEEECTTSSSCEEEEEEEEEECCCEEE---TTEEECSEEEECCCCCTTCTTCEEEE-TTEEEEEEEEE------C
T ss_pred CCCceEEEEEcCCCceEEEEccceeeeeeEec---CCcEeccEEEecCCCCCCcCCCeEEE-CCCEEEEEECC------C
Confidence 1112333332222222 344555443222111 13334578999999999999999995 57999999986 2
Q ss_pred cceeEEEec
Q 013014 305 SGVGFSIPV 313 (451)
Q Consensus 305 ~~~~~aIP~ 313 (451)
...||+.++
T Consensus 166 G~~G~aa~l 174 (180)
T 1cqq_A 166 GRDGFSAML 174 (180)
T ss_dssp SSCEEEEEC
T ss_pred CCcEEEeee
Confidence 356777654
No 329
>2b0f_A Picornain 3C (protease 3C) (P3C); beta barrel, hydrolase-hydrolase inhibitor complex; HET: CA1; NMR {Human rhinovirus 14} PDB: 2in2_A
Probab=97.07 E-value=0.021 Score=51.12 Aligned_cols=143 Identities=22% Similarity=0.339 Sum_probs=84.4
Q ss_pred eEEEEEEEcCCCeEEecccccCCCCcEEEEeCCCcEEEE--EEEEEcC---CCCEEEEEEcCCCCCCccee--cCCCCCC
Q 013014 152 GSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDA--KIVGFDQ---DKDVAVLRIDAPKDKLRPIP--IGVSADL 224 (451)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHVv~~~~~i~V~~~dg~~~~a--~vv~~d~---~~DlAlLkv~~~~~~~~~l~--l~~s~~~ 224 (451)
+.-||.-|..+ ..|...|...+ +.+ .+ +|+.++. ...-.|. ..||++++++.. +++.-+. +.+....
T Consensus 23 g~~t~LgI~d~-~~vvP~Ha~~~-~~i--~i-~g~~~~v~d~~~l~~~~~~~~eltlv~l~~~-~kfRDIrkfi~~~~~~ 96 (182)
T 2b0f_A 23 GEFTGLGIHDR-VCVIPTHAQPG-DDV--LV-NGQKIRVKDKYKLVDPENINLELTVLTLDRN-EKFRDIRGFISEDLEG 96 (182)
T ss_dssp EEEEEEEEEBT-EEEEESTTCCC-SEE--EE-TTEEEEEEEEEEEEETTTEEEEEEEEEECCS-SCBCCGGGTBCSSCCC
T ss_pred ccEEEEEEeee-EEEEecCCCCc-cEE--EE-CCEEEEeeeeeEEEcCCCCeeEEEEEECCCc-ccccchHHhcCCCCCC
Confidence 34478888755 89999998665 333 22 5654321 1222232 469999999754 3444332 1122211
Q ss_pred CCCcEEEEeeCCCCCCC-ceEEeEEeeeeeeeccCCCCCCcccEEEEcccCCCCCCCCceeCCCceEEEEEeeeeCCCCC
Q 013014 225 LVGQKVYAIGNPFGLDH-TLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGSLIGINTAIYSPSGA 303 (451)
Q Consensus 225 ~~G~~V~~iG~p~g~~~-~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~~~ 303 (451)
. +.+.++-.. ..+. .+..|.+...... . ..+......+.++++..+|+=||||+. +|+++|||.++
T Consensus 97 ~--~~~lv~n~~-~~p~~~~~vg~~~~~g~i-~--l~G~~t~~~~~Y~~pTk~G~CGgvl~~-~gkIlGIHvaG------ 163 (182)
T 2b0f_A 97 V--DATLVVHSN-NFTNTILEVGPVTMAGLI-N--LSSTPTNRMIRYDYATKTGQCGGVLCA-TGKIFGIHVGG------ 163 (182)
T ss_dssp S--EEEEEEESS-SCEEEEEEEEEEEEEEEE-E--ETTEEEEEEEEEESCCCTTCTTCEEEE-TTEEEEEEEEE------
T ss_pred C--ceEEEEEcC-CCceEEEEecceEEeceE-c--CCCcEecceEEeccCCCCcccCCeEEe-CCCEEEEEeCC------
Confidence 2 445555322 2222 2345554433221 1 123334678899999999999999995 88999999986
Q ss_pred ccceeEEEec
Q 013014 304 SSGVGFSIPV 313 (451)
Q Consensus 304 ~~~~~~aIP~ 313 (451)
....||+.++
T Consensus 164 ~G~~Gfaa~l 173 (182)
T 2b0f_A 164 NGRQGFSAQL 173 (182)
T ss_dssp ETTEEEEEEC
T ss_pred CCCceEehhh
Confidence 3457787654
No 330
>2pka_A Kallikrein A; serine proteinase; 2.05A {Sus scrofa} SCOP: b.47.1.2 PDB: 2kai_A 1hia_A
Probab=96.75 E-value=0.0059 Score=46.79 Aligned_cols=49 Identities=10% Similarity=0.018 Sum_probs=31.3
Q ss_pred CeEEEEEEEcCCCeEEecccccCCCCcEEEEeC-------CCcEEEEEEEEEcCCCC
Q 013014 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFA-------DQSAYDAKIVGFDQDKD 200 (451)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHVv~~~~~i~V~~~-------dg~~~~a~vv~~d~~~D 200 (451)
...|.|.+|+++ +|||+|||+.+...+.+-.. +++.+..+-+..+|++|
T Consensus 23 ~~~CgGslIs~~-~VLTAAHC~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~ 78 (80)
T 2pka_A 23 SFQCGGVLVNPK-WVLTAAHCKNDNYEVWLGRHNLFENENTAQFFGVTADFPHPGFN 78 (80)
T ss_dssp EEEEEEEEEETT-EEEECGGGCCSCCEEEESCSBTTSCCTTCEEEEEEEEEECTTTT
T ss_pred ceEEEEEEEcCC-EEEECHHHCCCCcEEEEeeeEcCCCCCCcEEEEEEEEEECcCCC
Confidence 357999999986 99999999976433332111 12345555556666554
No 331
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=96.66 E-value=0.00028 Score=71.33 Aligned_cols=58 Identities=17% Similarity=0.288 Sum_probs=0.0
Q ss_pred cceEEEecCCCCcccccCceeeecccCCCCCCCcEEEEECCEEcC--CHHHHHHHHhcCCCCCEEEEEEEECC
Q 013014 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCKVGDELLLQGIKQP 420 (451)
Q Consensus 350 ~Gv~V~~v~~~s~a~~aGl~~~~~~~~~~L~~GDiIl~vnG~~i~--~~~dl~~~l~~~~~g~~v~l~v~R~g 420 (451)
.+.+|.+|.++++|+++||++ ||+|++|||++|. +++++..++.. .++.+.++|.+..
T Consensus 315 ~~g~I~~V~~gs~A~~aGL~~-----------GD~Il~VNg~~v~~~s~~~~~~~l~~--~~~~v~L~V~p~~ 374 (388)
T 3suz_A 315 QNGIICSLMRGGIAERGGVRV-----------GHRIIEINGQSVVATAHEKIVQALSN--SVGEIHMKTMPAA 374 (388)
T ss_dssp -------------------------------------------------------------------------
T ss_pred ecCEEEEeecCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHh--CCCeEEEEEEecc
Confidence 344788999999999999999 9999999999997 45677777764 4677788876543
No 332
>2bhg_A Foot-and-mouth disease virus 3C protease; chymotrypsin-like cysteine protease, capsid protein, core protein; 1.9A {Foot-and-mouth disease virus} SCOP: b.47.1.4 PDB: 2j92_A 2wv4_A 2wv5_A
Probab=96.55 E-value=0.0075 Score=55.50 Aligned_cols=159 Identities=17% Similarity=0.255 Sum_probs=89.1
Q ss_pred EEEEEEEcCCCeEEecccccCCCCcEEEEeCCCcEEE---EEEE----EEcCC---CCEEEEEEcCCCCCCcceecCCCC
Q 013014 153 SGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYD---AKIV----GFDQD---KDVAVLRIDAPKDKLRPIPIGVSA 222 (451)
Q Consensus 153 ~GSGfiI~~~G~ILT~aHVv~~~~~i~V~~~dg~~~~---a~vv----~~d~~---~DlAlLkv~~~~~~~~~l~l~~s~ 222 (451)
+-+|..|-.+ .+|...|...+... .+.+ +++.+. ..+. ..|.. .||++++++.. .++.-+.=--.+
T Consensus 31 ~~~~LgI~~r-~~l~P~H~~~~~~~-~i~i-~g~~~~~~~~~~~~~e~~v~~~~~~~Dl~~~~l~~~-~kfrdi~k~f~~ 106 (209)
T 2bhg_A 31 ICCATGVFGT-AYLVPRHLFAEKYD-KIML-DGRAMTDSDYRVFEFEIKVKGQDMLSDAALMVLHRG-NKVRDITKHFRD 106 (209)
T ss_dssp EEEEEEEEBT-EEEEEHHHHTSCCS-EEEE-TTEEECGGGEEEECCEECCSSSCEECSEEEEEESSS-CCBCCCGGGBCS
T ss_pred EEEEeeEcCC-EEEEEcccCCCCCc-EEEE-cCEEEEeeeeEEeeceeeecCCCCceeEEEEECCCC-cccCchhhhccc
Confidence 4566777544 89999999866322 3333 344432 1222 23433 69999999754 334333211112
Q ss_pred CC--CCCcEEEEeeCCCCCCCceEEeEEeeeeeeeccCCCCCCcccEEEEcccCCCCCCCCceeC---CCceEEEEEeee
Q 013014 223 DL--LVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLD---SSGSLIGINTAI 297 (451)
Q Consensus 223 ~~--~~G~~V~~iG~p~g~~~~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPlvd---~~G~VVGI~s~~ 297 (451)
++ ..++.+..+-++.........|.+......... ..+.....++.++++..+|+=||+|+- ..|+++|||.++
T Consensus 107 ~~~~~~~~~~~~~~n~~~~~~~~~~g~~~~~~~~~~~-~~G~~~~~~~~Y~~pT~~G~CGs~lv~~~~~~~kIvGIHvaG 185 (209)
T 2bhg_A 107 TARMKKGTPVVGVVNNADVGRLIFSGEALTYKDIVVS-MDGDTMPGLFAYKAATRAGYAGGAVLAKDGADTFIVGTHSAG 185 (209)
T ss_dssp SCEECTTCEEEEEEEETTTEEEEEEEEESSCEECCC------CCTTEEEEECCCCTTCTTCEEEEEETTEEEEEEEEEEE
T ss_pred ccccCCCCeEEEEeccCccCceeeeeeEEEccceeee-cCCCccccEEEEcCCCCCCcCCCEEEEecCCCceEEEEEEcc
Confidence 22 345556666555433233334544333332211 123344678999999999999999964 378999999986
Q ss_pred eCCCCCccceeEEEeccCchhhHHHhh
Q 013014 298 YSPSGASSGVGFSIPVDTVNGIVDQLV 324 (451)
Q Consensus 298 ~~~~~~~~~~~~aIP~~~i~~~l~~l~ 324 (451)
..+.||+-++ .++.++.++
T Consensus 186 ------~g~~G~aa~l--~r~~~~~~~ 204 (209)
T 2bhg_A 186 ------GNGVGYCSCV--SRSMLQKMK 204 (209)
T ss_dssp ------ETTEEEEEEC--CHHHHHHHH
T ss_pred ------CCCceEEEEc--CHHHHHHHH
Confidence 2345666543 444444444
No 333
>2ijd_1 Picornain 3C, RNA-directed RNA polymerase; RNA-dependent RNA polymerase, picornavirus, protease, hydrolase, transferase; 3.40A {Human poliovirus 1} SCOP: b.47.1.4 e.8.1.4
Probab=95.84 E-value=0.47 Score=50.80 Aligned_cols=144 Identities=16% Similarity=0.247 Sum_probs=80.2
Q ss_pred eEEEEEEEcCCCeEEecccccCCCCcEEEEeCCCcEEEEE--EEEEcC---CCCEEEEEEcCCCCCCccee-c-CCCCCC
Q 013014 152 GSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDAK--IVGFDQ---DKDVAVLRIDAPKDKLRPIP-I-GVSADL 224 (451)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHVv~~~~~i~V~~~dg~~~~a~--vv~~d~---~~DlAlLkv~~~~~~~~~l~-l-~~s~~~ 224 (451)
+.-+|..|..+ .+|...|...+. .+.+ +|..+... ...+|. ..||+++++... .+++.+. + .+...
T Consensus 23 ~~~~~l~i~~~-~~l~p~H~~~~~-~~~i---~g~~~~~~~~~~~~~~~~~~~dl~~~~~~~~-~~frdi~~~~~~~~~- 95 (644)
T 2ijd_1 23 GEFTMLGVHDN-VAILPTHASPGE-SIVI---DGKEVAILAAKALADQAGTNLEITIITLKRN-EKFRDIRPHIPTQIT- 95 (644)
T ss_dssp EEEEEEEEEBT-EEEEEGGGCCCS-EEEE---TTEEEEEEECCEEECTTSCEEEEEEEEECSS-CCBCCCGGGSCSSCC-
T ss_pred cEEEEEEEece-EEEEccccCCCc-eEEE---CCEEEEeccceeEEcCCCCceeEEEEECCCC-CCcCChHHhccCCcc-
Confidence 34567777655 899999988643 3222 34333211 123344 359999999743 3444443 1 11111
Q ss_pred CCCcEEEEeeCCCCCCC-ceEEeEEeeeeeeeccCCCCCCcccEEEEcccCCCCCCCCceeCCCceEEEEEeeeeCCCCC
Q 013014 225 LVGQKVYAIGNPFGLDH-TLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGSLIGINTAIYSPSGA 303 (451)
Q Consensus 225 ~~G~~V~~iG~p~g~~~-~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~~~ 303 (451)
...+-++++ ...+... .+..|.+..... +. ..+......+.++++..+|+=|+||+. +|+|||||.++-
T Consensus 96 ~~~~~~l~~-~~~~~~~~~~~~~~~~~~g~-~~--~~g~~~~~~~~y~~~T~~G~CG~~l~~-~gkIvGiHvaG~----- 165 (644)
T 2ijd_1 96 ETNDGVLIV-NTSKYPNMYVPVGAVTEQGY-LN--LGGRQTARTLMYNFPTRAGQAGGVITC-TGKVIGMHVGGN----- 165 (644)
T ss_dssp CEEEEEEEE-CSSSSTTEEEEEEEEEEEEE-EC--CTTSCEEEEEEECSCCCTTCTTCEEEE-TTEEEEEEEEEC-----
T ss_pred CCCceEEEE-cCCCCceEEEEeeeeeeccc-ee--cCCCccccEEEEcCCCCCCCCCchhhh-CCcEEEEEEcCC-----
Confidence 112333332 2212222 233455543222 11 123344678899999999999999985 799999999872
Q ss_pred ccceeEEEec
Q 013014 304 SSGVGFSIPV 313 (451)
Q Consensus 304 ~~~~~~aIP~ 313 (451)
...||+.++
T Consensus 166 -g~~g~a~~l 174 (644)
T 2ijd_1 166 -GSHGFAAAL 174 (644)
T ss_dssp -SSCEEEEEC
T ss_pred -CCceEEEEc
Confidence 235666655
No 334
>1yph_E Chymotrypsin A, chain C; serine protease, hydrolase; 1.34A {Bos taurus} PDB: 1ca0_C 1cbw_C 1cho_G 1gct_C 1ab9_C* 1ggd_C* 1gha_G 1ghb_G* 1gmc_G 1gmd_G 1gmh_G 1hja_C 1mtn_C 1n8o_C 1vgc_C* 1gg6_C 2cha_C* 2gch_G 2gct_C 2gmt_C* ...
Probab=94.25 E-value=0.044 Score=43.54 Aligned_cols=52 Identities=31% Similarity=0.395 Sum_probs=35.1
Q ss_pred cCCCCCCCCceeCCC-c--eEEEEEeeeeCCCCCccceeEEEeccCchhhHHHhhh
Q 013014 273 AINPGNSGGPLLDSS-G--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (451)
Q Consensus 273 ~i~~G~SGGPlvd~~-G--~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (451)
..+.|+|||||+-.. | .++||+++....+ .....+...-+....+||++.++
T Consensus 41 ~~C~GDSGGPL~~~~~~~~~l~GIvS~g~~c~-~~~~p~vyt~V~~y~~WI~~~~~ 95 (97)
T 1yph_E 41 SSCMGDSGGPLVCKKNGAWTLVGIVSWGSSTC-STSTPGVYARVTALVNWVQQTLA 95 (97)
T ss_dssp BCCTTCTTCEEEEEETTEEEEEEEEEECCTTC-CTTSEEEEEEHHHHHHHHHHHHH
T ss_pred CCCcCCCCCcEEEEeCCeEEEEEEEEeCCCCC-CCCCCeEEEEHHHhHHHHHHHHc
Confidence 467899999998532 2 7999999865322 22334556667777777776543
No 335
>1wxr_A Haemoglobin protease; hemoglobine protease, autotransporter, beta helix, heme uptake, spate, hydrolase; 2.20A {Escherichia coli} PDB: 3ak5_A
Probab=92.02 E-value=0.28 Score=54.59 Aligned_cols=79 Identities=18% Similarity=0.228 Sum_probs=50.9
Q ss_pred eEEEEEEEcCCCeEEecccccCCCCcEEEEeCCC-cEEEEEEEEE--cCCCCEEEEEEcCCCCCCcceecCCCC------
Q 013014 152 GSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQ-SAYDAKIVGF--DQDKDVAVLRIDAPKDKLRPIPIGVSA------ 222 (451)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHVv~~~~~i~V~~~dg-~~~~a~vv~~--d~~~DlAlLkv~~~~~~~~~l~l~~s~------ 222 (451)
..|.+.+|++. ||+|.+|+... . .|.+.++ ..|+. +.. .+..|+++.|++....+..|+.+....
T Consensus 56 ~~G~aTLI~pq-YiVSvaHn~gy-~--~v~fG~~~n~Y~i--V~rnn~~~~Dy~~pRL~K~VTEvaP~~~t~~g~~~~~y 129 (1048)
T 1wxr_A 56 EIGVATLINPQ-YIASVKHNGGY-T--NVSFGDGENRYNI--VDRNNAPSLDFHAPRLDKLVTEVAPTAVTAQGAVAGAY 129 (1048)
T ss_dssp TTCCCEEEETT-EEEBCTTCCSC-C--EECCTTSCCCEEE--EECCBCSSSSCBCCEESSCCCSSCCCCBCSSCSCTTGG
T ss_pred CCceEEEEcCc-EEEEeeecCCC-c--eEEeCCCcceEEE--EeeCCCCCCCeeeeecccccccccceeeccccCccccc
Confidence 45888899986 99999995443 2 4555554 35544 322 234599999999766566676654332
Q ss_pred -CCCCCcEEEEeeCC
Q 013014 223 -DLLVGQKVYAIGNP 236 (451)
Q Consensus 223 -~~~~G~~V~~iG~p 236 (451)
+.+.....+-+|..
T Consensus 130 ~d~ery~~f~RvGsG 144 (1048)
T 1wxr_A 130 LDKERYPVFYRLGSG 144 (1048)
T ss_dssp GCTTTCCCEEEEECS
T ss_pred cccccCceEEEECCc
Confidence 13556667777754
No 336
>3e90_B NS3 protease; trypsin-like serine protease, protease inhibitor, catalytic histidine, induced FIT, ATP-binding, capsid protein, helicase; HET: NKK; 2.45A {West nile virus} SCOP: b.47.1.3
Probab=90.86 E-value=0.49 Score=41.88 Aligned_cols=132 Identities=20% Similarity=0.242 Sum_probs=74.4
Q ss_pred HhCCceEEEEeeeeccCccccccccccCeEEEEEEEcCCCeEEecccccCCCCcEEEEeCCCcEEEEEEEEEcCCCCEEE
Q 013014 124 ENTPSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDAKIVGFDQDKDVAV 203 (451)
Q Consensus 124 ~~~~SVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHVv~~~~~i~V~~~dg~~~~a~vv~~d~~~DlAl 203 (451)
.+.+-|-+|....--. ....|-|+.- +|-+=|=.||.+++.- ..+++.+ ....-|-..|+.
T Consensus 21 ~l~dGVYRI~~~gl~G----------~~Q~GVGv~k--~GVFHTMWHVTrGa~l----~~~g~~l--~P~WasV~~Dli- 81 (198)
T 3e90_B 21 DTTTGVYRIMTRGLLG----------SYQAGAGVMV--EGVFHTLWHTTKGAAL----MSGEGRL--DPYWGSVKEDRL- 81 (198)
T ss_dssp CCCSEEEEEEEEETTE----------EEEEEEEEEE--TTEEEECHHHHTTCCE----EETTEEE--CEEEEETTTTEE-
T ss_pred cCCCceEEEEeccccc----------cceeeeEEee--CCEEEeeeeecCcceE----EECCcEe--cceeehheecee-
Confidence 5577899997743211 1234666655 6899999999998532 1233332 222445566753
Q ss_pred EEEcCCCCCCcceecCCCCCCCCCcEEEEeeCCCCCCCc---eEEeEEeeeeeeeccCCCCCCcccEEEEcccCCCCCCC
Q 013014 204 LRIDAPKDKLRPIPIGVSADLLVGQKVYAIGNPFGLDHT---LTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSG 280 (451)
Q Consensus 204 Lkv~~~~~~~~~l~l~~s~~~~~G~~V~~iG~p~g~~~~---~~~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~SG 280 (451)
..-.+- + |. ..-.-.+.|.++-.+.+.... ...|+..-.. .+.-.+.-...+|.||
T Consensus 82 -sYGG~W-k-----L~--~~W~g~~eVQl~Av~Pgk~~~~~Qt~PG~f~~~~------------g~iGaV~lD~p~GTSG 140 (198)
T 3e90_B 82 -CYGGPW-K-----LQ--HKWNGQDEVQMIVVEPGKNVKNVRTKPGVFKTPE------------GEIGAVTLDFPTGTSG 140 (198)
T ss_dssp -EESSSC-C-----CC--CCCCSSSCEEEEECCTTSCCEEEEECCEEEEETT------------EEEEEECCCCCTTCTT
T ss_pred -ecCCcc-c-----CC--cccCCCceEEEEEECCCCceEEEEeCCeEEEcCC------------CeEEEEECCCCCCCCC
Confidence 343321 2 21 112223667777776665432 2334332111 1222334445679999
Q ss_pred CceeCCCceEEEEEe
Q 013014 281 GPLLDSSGSLIGINT 295 (451)
Q Consensus 281 GPlvd~~G~VVGI~s 295 (451)
+|++|.+|+|||+.-
T Consensus 141 SPIin~~G~VVGLYG 155 (198)
T 3e90_B 141 SPIVDKNGDVIGLYG 155 (198)
T ss_dssp CEEECTTCCEEEECC
T ss_pred CceecCCCcEEEEec
Confidence 999999999999953
No 337
>2fp7_B Serine protease NS3; flavivirus, NS3 protease, NS2B cofactor; HET: OAR; 1.68A {West nile virus} SCOP: b.47.1.3
Probab=90.64 E-value=0.15 Score=44.29 Aligned_cols=114 Identities=21% Similarity=0.270 Sum_probs=62.6
Q ss_pred eEEEEEEEcCCCeEEecccccCCCCcEEEEeCCCcEEEEEEEEEcCCCCEEEEEEcCCCCCCcceecCCCCCCCCCcEEE
Q 013014 152 GSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDAPKDKLRPIPIGVSADLLVGQKVY 231 (451)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHVv~~~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~~~~~~~~l~l~~s~~~~~G~~V~ 231 (451)
..|-|+.- +|-+=|=.||.+++.- ..+++.+. ...-|-..|++ ..-.+- + |. ..-.-+++|.
T Consensus 20 Q~GVGv~~--~GVFHTmWHVTrGa~l----~~~g~~~~--P~wa~V~~Dli--sYGG~W-k-----L~--~kW~g~~eVq 81 (172)
T 2fp7_B 20 QAGAGVMV--EGVFHTLWHTTKGAAL----MSGEGRLD--PYWGSVKEDRL--CYGGPW-K-----LQ--HKWNGHDEVQ 81 (172)
T ss_dssp EEEEEEEE--TTEEEEEHHHHTTCCE----EETTEEEC--EEEEETTTTEE--EESSSC-C-----CC--CCCCSSSCEE
T ss_pred eeeeEEee--CCEEEeeeeecCCceE----EECCcEec--ceeehheecee--ecCCcc-c-----cC--cccCCCceEE
Confidence 45777765 5899999999998542 12333321 22344556653 333321 1 21 1223345566
Q ss_pred EeeCCCCCCC---ceEEeEEeeeeeeeccCCCCCCcccEEEEcccCCCCCCCCceeCCCceEEEEEe
Q 013014 232 AIGNPFGLDH---TLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGSLIGINT 295 (451)
Q Consensus 232 ~iG~p~g~~~---~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPlvd~~G~VVGI~s 295 (451)
++-.+.+... ....|+..... .+.-.+.-...+|.||+|++|.+|+|||+.-
T Consensus 82 l~a~~Pgk~~~n~qt~Pg~f~~~~------------GeigaI~lD~p~GtSGSPIin~~G~vVGLYG 136 (172)
T 2fp7_B 82 MIVVEPGKNVKNVQTKPGVFKTPE------------GEIGAVTLDYPTGTSGSPIVDKNGDVIGLYG 136 (172)
T ss_dssp EEECCTTSCCEEEEECCEEEEETT------------EEEEEECCCCCGGGTTCEEECTTSCEEEESC
T ss_pred EEEECCCCceEEEEccCceEecCC------------CeEEEEECCCCCCCCCCceEccCCcEEEEec
Confidence 6655544432 12223222110 1222334456679999999999999999954
No 338
>2ggv_B NS3, non-structural protein 3; beta barrel, serine protease, viral protease, flavivirus, hydrolase; 1.80A {West nile virus} PDB: 2ijo_B
Probab=90.33 E-value=0.16 Score=44.49 Aligned_cols=134 Identities=19% Similarity=0.215 Sum_probs=73.7
Q ss_pred HhCCceEEEEeeeeccCccccccccccCeEEEEEEEcCCCeEEecccccCCCCcEEEEeCCCcEEEEEEEEEcCCCCEEE
Q 013014 124 ENTPSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDAKIVGFDQDKDVAV 203 (451)
Q Consensus 124 ~~~~SVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHVv~~~~~i~V~~~dg~~~~a~vv~~d~~~DlAl 203 (451)
++.+-|-+|....--+ ....|-|+.- +|-+=|=.||.+++.- ..+++.+. ...-|-..|++
T Consensus 16 ~l~dGvYRI~~~gl~G----------~~Q~GVGv~~--~GVFHTmWHVTrGa~L----~~~g~~l~--P~wasV~~Dli- 76 (185)
T 2ggv_B 16 DTTTGVYRIMTRGLLG----------SYQAGAGVMV--EGVFHTLWATTKGAAL----MSGEGRLD--PYWGSVKEDRL- 76 (185)
T ss_dssp CCCSEEEEEEEECSSS----------EEEEEEEEEE--TTEEEECHHHHTTCCE----EETTEEEC--EEEEETTTTEE-
T ss_pred cCCCcEEEEEeccccc----------cceeeeEEee--CCEEEeeeeecCcceE----EECCcEec--ceeehhhccee-
Confidence 3567788887643111 1235667665 5899999999998542 12333322 22344556753
Q ss_pred EEEcCCCCCCcceecCCCCCCCCCcEEEEeeCCCCCCC---ceEEeEEeeeeeeeccCCCCCCcccEEEEcccCCCCCCC
Q 013014 204 LRIDAPKDKLRPIPIGVSADLLVGQKVYAIGNPFGLDH---TLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSG 280 (451)
Q Consensus 204 Lkv~~~~~~~~~l~l~~s~~~~~G~~V~~iG~p~g~~~---~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~SG 280 (451)
..-.+- + |. ..-.-+++|.++-.+.+... ....|+..... .+.-.+.-...+|.||
T Consensus 77 -sYGG~W-k-----L~--~kW~g~~eVql~av~Pgk~~~nvQt~Pg~f~~~~------------GeigAI~lD~p~GTSG 135 (185)
T 2ggv_B 77 -CYGGPW-Q-----LQ--HKWNGQDEVQMIVVEPGRNVKNVQTKPGVFKTPE------------GEIGAVTLDFPTGTSG 135 (185)
T ss_dssp -EESSSC-C-----CC--CCCCSSSCEEEEECCTTSCCEEEEECCEEEEETT------------EEEEEECCCCCGGGTT
T ss_pred -ecCCcc-c-----Cc--cccCCCceEEEEEECCCCceEEEEccCceEecCC------------CeEEEEECCCCCCCCC
Confidence 333321 1 21 12233566666665545432 12223222110 1223334456679999
Q ss_pred CceeCCCceEEEEEeee
Q 013014 281 GPLLDSSGSLIGINTAI 297 (451)
Q Consensus 281 GPlvd~~G~VVGI~s~~ 297 (451)
+|++|.+|+|||+.-..
T Consensus 136 SPIin~~G~vvGLYGNG 152 (185)
T 2ggv_B 136 SPIVDKNGDVIGLYGNG 152 (185)
T ss_dssp CEEECTTSCEEEEEEEE
T ss_pred CceEcCCCcEEEEecce
Confidence 99999999999996543
No 339
>2fom_B Polyprotein; flavivirus, NS3 protease, NS2B cofactor, viral protein-prote complex; 1.50A {Dengue virus 2} SCOP: b.47.1.3 PDB: 1df9_A 2qid_A 1bef_A
Probab=90.14 E-value=0.17 Score=44.45 Aligned_cols=133 Identities=21% Similarity=0.278 Sum_probs=72.2
Q ss_pred HHhCCceEEEEeeeeccCccccccccccCeEEEEEEEcCCCeEEecccccCCCCcEEEEeCCCcEEEEEEEEEcCCCCEE
Q 013014 123 QENTPSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDAKIVGFDQDKDVA 202 (451)
Q Consensus 123 ~~~~~SVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHVv~~~~~i~V~~~dg~~~~a~vv~~d~~~DlA 202 (451)
.++.+-|-+|....--+ ....|-|+.- +|-+=|=.||.+++.- ..+++.+. ...-|-..|++
T Consensus 16 ~~l~dGvYRI~~~gl~G----------~~Q~GVGv~~--~GVFHTmWHVTrGa~l----~~~g~~l~--P~wa~V~~Dli 77 (185)
T 2fom_B 16 AELEDGAYRIKQKGILG----------YSQIGAGVYK--EGTFHTMWHVTRGAVL----MHKGKRIE--PSWADVKKDLI 77 (185)
T ss_dssp --CCSEEEEEEEEETTE----------EEEEEEEEEE--TTEEEEEHHHHTTCCE----EETTEEEC--EEEEETTTTEE
T ss_pred ccCCCcEEEEEeccccc----------cceeeeEEee--CCEEEeeeeecCcceE----EECCcEec--ceeehheecee
Confidence 45788899987643211 1235667665 6899999999998542 12333321 22344556753
Q ss_pred EEEEcCCCCCCcceecCCCCCCCCCcEEEEeeCCCCCCC---ceEEeEEeeeeeeeccCCCCCCcccEEEEcccCCCCCC
Q 013014 203 VLRIDAPKDKLRPIPIGVSADLLVGQKVYAIGNPFGLDH---TLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNS 279 (451)
Q Consensus 203 lLkv~~~~~~~~~l~l~~s~~~~~G~~V~~iG~p~g~~~---~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~S 279 (451)
..-.+- + |. ..-.-+++|.++-.+.+... ....|+.... . .+.-.+.-...+|.|
T Consensus 78 --sYGG~W-k-----L~--~kW~g~~eVql~av~Pgk~~~nvQt~Pg~f~~~--------~----GeigaI~lD~p~GTS 135 (185)
T 2fom_B 78 --SYGGGW-K-----LE--GEWKEGEEVQVLALEPGKNPRAVQTKPGLFKTN--------T----GTIGAVSLDFSPGTS 135 (185)
T ss_dssp --EESSSC-C-----CC--CCCCTTCCEEEEECCTTSCCEEEEECCEEEECS--------S----CEEEEECCCSCGGGT
T ss_pred --ecCCcc-c-----Cc--cccCCCceEEEEEECCCCceEEEEcCCceeecC--------C----CeEEEEECCCCCCCC
Confidence 343321 1 21 11223455666655544432 1222322111 1 122333445667999
Q ss_pred CCceeCCCceEEEEEe
Q 013014 280 GGPLLDSSGSLIGINT 295 (451)
Q Consensus 280 GGPlvd~~G~VVGI~s 295 (451)
|+|++|.+|+|||+.-
T Consensus 136 GSPIin~~G~vvGLYG 151 (185)
T 2fom_B 136 GSPIVDKKGKVVGLYG 151 (185)
T ss_dssp TCEEECTTSCEEEETT
T ss_pred CCceEccCCcEEEEec
Confidence 9999999999999943
No 340
>3lkw_A Fusion protein of nonstructural protein 2B and nonstructural protein 3; viral protease, serine protease, NS3 protease, NS2B cofactor; 2.00A {Dengue virus 1} PDB: 3l6p_A
Probab=89.66 E-value=0.67 Score=42.16 Aligned_cols=128 Identities=19% Similarity=0.266 Sum_probs=70.3
Q ss_pred ceEEEEeeeeccCccccccccccCeEEEEEEEcCCCeEEecccccCCCCcEEEEeCCCcEEEEEEEEEcCCCCEEEEEEc
Q 013014 128 SVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDAKIVGFDQDKDVAVLRID 207 (451)
Q Consensus 128 SVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHVv~~~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~ 207 (451)
-|-+|....--+ ....|-|+.- +|-+=|=.||.+++.- ..+++.+ ....-|-..|++ .+-
T Consensus 71 GvYRI~~~gl~G----------~~Q~GVGv~~--~GVFHTmWHVTrGa~l----~~~g~~~--~P~wa~V~~Dli--sYG 130 (236)
T 3lkw_A 71 GIYRILQRGLLG----------RSQVGVGVFQ--EGVFHTMWHVTRGAVL----MYQGKRL--EPSWASVKKDLI--SYG 130 (236)
T ss_dssp EEEEEEEEETTE----------EEEEEEEEEE--TTEEEECHHHHTTCCE----EETTEEE--CEEEEETTTTEE--EES
T ss_pred cEEEEEeccccc----------cceeeeEEee--CCEEEEeeeecCcceE----EECCcEe--cceeehheecee--ecC
Confidence 678887643111 1235666655 6899999999998532 1233332 122445556753 343
Q ss_pred CCCCCCcceecCCCCCCCCCcEEEEeeCCCCCCCc---eEEeEEeeeeeeeccCCCCCCcccEEEEcccCCCCCCCCcee
Q 013014 208 APKDKLRPIPIGVSADLLVGQKVYAIGNPFGLDHT---LTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLL 284 (451)
Q Consensus 208 ~~~~~~~~l~l~~s~~~~~G~~V~~iG~p~g~~~~---~~~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPlv 284 (451)
.+- + |. ..=.-.+.|.++-++.+.... ...|+..-.. .+.-.+.-...+|.||+|++
T Consensus 131 G~W-k-----L~--~~W~g~~eVqv~A~~Pg~~~~~~qt~PG~~~~~~------------g~igav~lD~p~GTSGSPIi 190 (236)
T 3lkw_A 131 GGW-R-----FQ--GSWNAGEEVQVIAVEPGKNPKNVQTAPGTFKTPE------------GEVGAIALDFKPGTAGSPIV 190 (236)
T ss_dssp SSC-C-----CC--CCCCTTCCEEEEECCTTSCCEEEEECCEEEEETT------------EEEEEECCCCCTTCTTCEEE
T ss_pred CCc-c-----CC--cccCCCceEEEEEECCCCceEEEEeCCeEEEcCC------------CeEEEEECCCCCCCCCCcee
Confidence 321 2 21 111123667777776555432 2334332111 12223344456799999999
Q ss_pred CCCceEEEEEe
Q 013014 285 DSSGSLIGINT 295 (451)
Q Consensus 285 d~~G~VVGI~s 295 (451)
|.+|+|||+.-
T Consensus 191 n~~G~VvGLYG 201 (236)
T 3lkw_A 191 NREGKIVGLYG 201 (236)
T ss_dssp CTTSCEEEESC
T ss_pred cCCCcEEEEec
Confidence 99999999943
No 341
>3u1j_B Serine protease NS3; serine protease, ER MEM hydrolase-hydrolase inhibitor complex; 1.80A {Dengue virus 3} SCOP: b.47.1.3 PDB: 3u1i_B
Probab=89.43 E-value=0.22 Score=43.91 Aligned_cols=132 Identities=22% Similarity=0.274 Sum_probs=73.7
Q ss_pred HhCCceEEEEeeeeccCccccccccccCeEEEEEEEcCCCeEEecccccCCCCcEEEEeCCCcEEEEEEEEEcCCCCEEE
Q 013014 124 ENTPSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDAKIVGFDQDKDVAV 203 (451)
Q Consensus 124 ~~~~SVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHVv~~~~~i~V~~~dg~~~~a~vv~~d~~~DlAl 203 (451)
.+.+-|-+|....--. ....|-|+.- +|-+=|=.||.+++.- ..+++.+ ....-|-..|++
T Consensus 26 ~~~dGVYRI~~~gl~G----------~~Q~GVGv~k--~GVFHTMWHVTrGa~l----~~~g~~l--~P~wasV~~Dli- 86 (191)
T 3u1j_B 26 ELEEGVYRIKQQGIFG----------KTQVGVGVQK--EGVFHTMWHVTRGAVL----THNGKRL--EPNWASVKKDLI- 86 (191)
T ss_dssp CCCSEEEEEEEEETTE----------EEEEEEEEEE--TTEEEEEHHHHTTCCE----EETTEEE--CEEEEETTTTEE-
T ss_pred cCCCceEEEEeccccc----------cceeeeEEee--CCEEEeeeeecCcceE----EECCcEe--cceeecceecee-
Confidence 5677899997743211 1234666655 6899999999998532 1233332 222445566753
Q ss_pred EEEcCCCCCCcceecCCCCCCCCCcEEEEeeCCCCCCCc---eEEeEEeeeeeeeccCCCCCCcccEEEEcccCCCCCCC
Q 013014 204 LRIDAPKDKLRPIPIGVSADLLVGQKVYAIGNPFGLDHT---LTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSG 280 (451)
Q Consensus 204 Lkv~~~~~~~~~l~l~~s~~~~~G~~V~~iG~p~g~~~~---~~~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~SG 280 (451)
..-.+- ++ . ..=.-.+.|.++-.+.+.... ...|+..-. . .+.-.+.-...+|.||
T Consensus 87 -sYGG~W-kL-----~--~~W~g~~eVQl~Av~Pgk~~~~~Qt~PG~f~~~--------~----g~iGaV~lD~p~GTSG 145 (191)
T 3u1j_B 87 -SYGGGW-RL-----S--AQWQKGEEVQVIAVEPGKNPKNFQTMPGTFQTT--------T----GEIGAIALDFKPGTSG 145 (191)
T ss_dssp -EESSSC-CC-----C--CCCCTTCCEEEEECCTTSCCEEEEECCEEEECS--------S----CEEEEECCCCCTTCTT
T ss_pred -ecCCcc-cC-----C--cccCCCceEEEEEECCCCceEEEEeCCeEEEcC--------C----CeEEEEECCCCCCCCC
Confidence 343321 22 1 111123567777666554432 233433211 1 1223344445679999
Q ss_pred CceeCCCceEEEEEe
Q 013014 281 GPLLDSSGSLIGINT 295 (451)
Q Consensus 281 GPlvd~~G~VVGI~s 295 (451)
+|++|.+|+|||+.-
T Consensus 146 SPIin~~G~VVGLYG 160 (191)
T 3u1j_B 146 SPIINREGKVVGLYG 160 (191)
T ss_dssp CEEECTTSCEEEECC
T ss_pred CceecCCCcEEEEec
Confidence 999999999999953
No 342
>1ep5_B Capsid protein C, coat protein C; beta barrel, hydrolase; 2.30A {Venezuelan equine encephalitis virus} SCOP: b.47.1.3 PDB: 1ep6_A 3j0c_C
Probab=88.88 E-value=0.56 Score=38.94 Aligned_cols=32 Identities=25% Similarity=0.395 Sum_probs=26.4
Q ss_pred EEEEcccCCCCCCCCceeCCCceEEEEEeeee
Q 013014 267 VIQTDAAINPGNSGGPLLDSSGSLIGINTAIY 298 (451)
Q Consensus 267 ~i~~d~~i~~G~SGGPlvd~~G~VVGI~s~~~ 298 (451)
+..-...-.+|+||-|++|..|+||+|+-.+.
T Consensus 96 ftip~G~g~~GdSGrpI~Dn~GrVVaIVlGGa 127 (157)
T 1ep5_B 96 FTVPKGVGAKGDSGRPILDNQGRVVAIVLGGV 127 (157)
T ss_dssp EEEETTCCCTTCTTCEEECTTSCEEEEEEEEE
T ss_pred EEeccCCCCCCCCCCccCcCCCcEEEEEecCC
Confidence 34445667899999999999999999998754
No 343
>1vcp_A Semliki forest virus capsid protein; virus coat protein, polyprotein, transmembrane, glycoprotein, nucleocapsid protein, viral protein; 3.00A {Semliki forest virus} SCOP: b.47.1.3 PDB: 1dyl_A 1vcq_A
Probab=88.39 E-value=0.72 Score=37.84 Aligned_cols=33 Identities=27% Similarity=0.468 Sum_probs=26.7
Q ss_pred EEEEcccCCCCCCCCceeCCCceEEEEEeeeeC
Q 013014 267 VIQTDAAINPGNSGGPLLDSSGSLIGINTAIYS 299 (451)
Q Consensus 267 ~i~~d~~i~~G~SGGPlvd~~G~VVGI~s~~~~ 299 (451)
+..-...-.+|+||-|++|..|+||+|+-.+..
T Consensus 89 ftvp~G~g~~GdSGrpI~Dn~GrVVaIVlGG~~ 121 (149)
T 1vcp_A 89 FTIPTGAGKPGDSGRPIFDNKGRVVAIVLGGAN 121 (149)
T ss_dssp EEEETTSCCTTCTTCEEECTTSCEEEEEEEEEE
T ss_pred EEecccCCCCCCCCCccCcCCCcEEEEEecCCC
Confidence 344455677999999999999999999987643
No 344
>4agk_A Capsid protein, coat protein, C; hydrolase, viral protein; 1.81A {Aura virus} PDB: 4agj_A 1kxa_A 2snw_A 1svp_A 1kxb_A 1kxc_A 1kxd_A 1kxe_A 2snv_A 1z8y_Q 1wyk_A
Probab=87.79 E-value=0.82 Score=38.00 Aligned_cols=31 Identities=35% Similarity=0.546 Sum_probs=25.8
Q ss_pred EEcccCCCCCCCCceeCCCceEEEEEeeeeC
Q 013014 269 QTDAAINPGNSGGPLLDSSGSLIGINTAIYS 299 (451)
Q Consensus 269 ~~d~~i~~G~SGGPlvd~~G~VVGI~s~~~~ 299 (451)
.-.....+|+||-|++|..|+||+|+-.+..
T Consensus 99 vp~g~g~~GdSGrPi~Dn~GrVVaIVlGG~n 129 (158)
T 4agk_A 99 IPTGAGGPGDSGRPILDNSGKVVAIVLGGAN 129 (158)
T ss_dssp EETTSSCTTCTTCEEECTTSCEEEEEEEEEE
T ss_pred eecccCCCCCCCCccccCCCCEEEEEecCCC
Confidence 3455677999999999999999999987643
No 345
>2yew_A Capsid protein, coat protein; alphavirus, molecular dynamics; 5.00A {Barmah forest virus}
Probab=87.37 E-value=0.76 Score=41.62 Aligned_cols=33 Identities=24% Similarity=0.472 Sum_probs=26.6
Q ss_pred EEEEcccCCCCCCCCceeCCCceEEEEEeeeeC
Q 013014 267 VIQTDAAINPGNSGGPLLDSSGSLIGINTAIYS 299 (451)
Q Consensus 267 ~i~~d~~i~~G~SGGPlvd~~G~VVGI~s~~~~ 299 (451)
+..-...-.+|+||-|++|..|+||+|+-++.+
T Consensus 193 ftvp~G~G~~GDSGRpI~DN~GrVVaIVLGGan 225 (253)
T 2yew_A 193 FTIPTGSGKPGDSGRPIFDNTGKVVAIVLGGAN 225 (253)
T ss_dssp EEEETTSCCSSCTTCEEECSSCBEEEEEEEEEE
T ss_pred EEcccCCCCCCCCCCccccCCCcEEEEEecCCC
Confidence 344455667999999999999999999987643
No 346
>1svp_A Sindbis virus capsid protein; chymotrypsin-like serine, mutant, coat protein, viral protein; 2.00A {Sindbis virus} SCOP: b.47.1.3 PDB: 1kxb_A 1kxa_A 2snw_A 1kxc_A 1kxd_A 1kxe_A 2snv_A 1z8y_Q 1wyk_A
Probab=87.11 E-value=0.93 Score=37.77 Aligned_cols=33 Identities=21% Similarity=0.366 Sum_probs=26.4
Q ss_pred EEEEcccCCCCCCCCceeCCCceEEEEEeeeeC
Q 013014 267 VIQTDAAINPGNSGGPLLDSSGSLIGINTAIYS 299 (451)
Q Consensus 267 ~i~~d~~i~~G~SGGPlvd~~G~VVGI~s~~~~ 299 (451)
+..-...-.+|+||-|++|..|+||+|+-.+..
T Consensus 98 ftvp~GvG~~GDSGRpI~DN~GrVVaivlgg~~ 130 (161)
T 1svp_A 98 FTIPRGVGGRGDAGRPIMDNSGRVVAIVLGGAD 130 (161)
T ss_dssp EEEETTSCCTTCTTCEEECTTSCEEEEEEEEEE
T ss_pred EEecccCCCCCCCCCccCcCCCcEEEEEecCCC
Confidence 334455667999999999999999999987643
No 347
>1kxf_A Sindbis virus capsid protein; chymotrypsin-like serine proteinase, wild type, viral protein; 2.38A {Sindbis virus} SCOP: b.47.1.3 PDB: 1ld4_A 3j0f_A
Probab=85.69 E-value=0.93 Score=41.41 Aligned_cols=32 Identities=25% Similarity=0.384 Sum_probs=26.2
Q ss_pred EEEEcccCCCCCCCCceeCCCceEEEEEeeee
Q 013014 267 VIQTDAAINPGNSGGPLLDSSGSLIGINTAIY 298 (451)
Q Consensus 267 ~i~~d~~i~~G~SGGPlvd~~G~VVGI~s~~~ 298 (451)
+..-...-.+|+||-|++|..|+||+|+-++.
T Consensus 203 ftvp~G~G~~GDSGRpI~DN~GrVVaIVLGGa 234 (264)
T 1kxf_A 203 FTIPRGVGGRGDSGRPIMDNSGRVVAIVLGGA 234 (264)
T ss_dssp EEEETTSCCTTCTTCEEECTTSCEEEEEEEEE
T ss_pred EEecccCCCCCCCCCccccCCCcEEEEEecCC
Confidence 34445566799999999999999999998754
No 348
>4ash_A NS6 protease; hydrolase, trypsin-like, calicivirus; 1.58A {Murine norovirus 1}
Probab=84.11 E-value=8.1 Score=32.96 Aligned_cols=136 Identities=16% Similarity=0.209 Sum_probs=75.1
Q ss_pred CeEEEEEEEcCCCeEEecccccC-CCCcEEEEeCCCcEEEEEEEEEcCCCCEEEEEEcCCC-CCCcceecCCCCCCCCCc
Q 013014 151 QGSGSGFVWDSKGHVVTNYHVIR-GASDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDAPK-DKLRPIPIGVSADLLVGQ 228 (451)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHVv~-~~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~~~-~~~~~l~l~~s~~~~~G~ 228 (451)
-+.|-||-|+.. ..+|+-||+. ++.++. | .+...+.++..-+++.+++..+. .+++-..|... ...|+
T Consensus 14 fgsgwgfwVS~~-~fiTaTHV~p~~~~eif-----G--~p~~~i~v~~~GEf~~~rfp~~~rpdvsgmiLEeg--~peGt 83 (185)
T 4ash_A 14 FGTGWGFWVSGH-VFITAKHVAPPKGTEIF-----G--RKPGDFTVTSSGDFLKYYFTSAVRPDIPAMVLENG--CQEGV 83 (185)
T ss_dssp ETTEEEEESSSS-EEEEEGGGSCCTTCCBT-----T--BCTTSEEEEEETTEEEEEESSCSCTTSCCCEECSS--CCTTC
T ss_pred ccCceEEEEccc-EEEEEEeecCCCchhhc-----C--CccceEEEeecCcEEEEEcCCCcCCCCcceEEecC--CCCCc
Confidence 357899999876 9999999994 443321 0 00111233445588888887543 24555555432 33377
Q ss_pred EEEE-eeCCCCCC--CceEEeEEeeeeeeeccCCCCCCcccEEEE-------cccCCCCCCCCceeCCCc---eEEEEEe
Q 013014 229 KVYA-IGNPFGLD--HTLTTGVISGLRREISSAATGRPIQDVIQT-------DAAINPGNSGGPLLDSSG---SLIGINT 295 (451)
Q Consensus 229 ~V~~-iG~p~g~~--~~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~-------d~~i~~G~SGGPlvd~~G---~VVGI~s 295 (451)
-+.+ +-.+.+.. ..+..|.+....-.-... .....++.+ |-...||+-|.|-+-..| -|+||++
T Consensus 84 V~svlikR~sgeliPlavRmgt~as~kIqGk~v---~gqtGmlltganaK~mdLGT~PGDCGcPYvykrgn~~vv~GVHt 160 (185)
T 4ash_A 84 VASVLVKRASGEMLALAVRMGSQAAIKIGSAVV---HGQTGMLLTGSNAKAQDLGTIPGDAGCPYVYKKGNTWVVIGVHV 160 (185)
T ss_dssp EEEEEEECTTCCEEEEEEEEEEEEEEEETTEEE---EEEEEEECC-------CCSCCTTCTTCEEEEEETTEEEEEEEEE
T ss_pred EEEEEEecCCCCcceeEEEecceeeeEEeeeEe---cceeeeEEecCCcccCcCCCCCCCCCCceEEeeCCceEEEEEEE
Confidence 6654 34444432 234555554332210000 001222332 344679999999986533 4999999
Q ss_pred eeeC
Q 013014 296 AIYS 299 (451)
Q Consensus 296 ~~~~ 299 (451)
+...
T Consensus 161 Aatr 164 (185)
T 4ash_A 161 AATR 164 (185)
T ss_dssp EECS
T ss_pred eecc
Confidence 8643
No 349
>3su6_A NS3 protease, NS4A protein; drug resistance, drug design, protease inhibitors, serine PR viral protein, hydrolase-inhibitor complex; HET: SU3; 1.10A {Hepatitis c virus} PDB: 3su2_A* 3sv9_A* 3m5l_A* 3m5m_A* 3m5n_A 3m5o_A 3rc4_A 3rc5_A 3rc6_A 3su3_A* 3su4_A* 3sv6_A* 3sv7_A* 3su1_A* 3su5_A* 3sv8_A* 3su0_A* 2p59_A* 2qv1_A 1a1q_A ...
Probab=79.45 E-value=1.2 Score=39.29 Aligned_cols=42 Identities=36% Similarity=0.577 Sum_probs=29.0
Q ss_pred cCCCCCCCCceeCCCceEEEEEeeeeCCCCCccceeEEEeccC
Q 013014 273 AINPGNSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDT 315 (451)
Q Consensus 273 ~i~~G~SGGPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~ 315 (451)
....|.||||++-..|.+|||..+.....+....+ .++|.+.
T Consensus 154 S~lkGSSGgPvLC~~GHaVGmf~aav~trGvakai-~fvPve~ 195 (203)
T 3su6_A 154 SYLKGSAGGPLLCPAGHAVGIFRTAVSTRGVAKAV-DFIPVES 195 (203)
T ss_dssp GGTTTCTTCEEECTTSCEEEEEEEEEEETTEEEEE-EEEEHHH
T ss_pred eeccCCCCCceecCCCCEEEEEEEEEEcCceeeeE-EEEEccc
Confidence 34579999999999999999987665543322223 3356643
No 350
>2fyq_A Chymotrypsin-like cysteine proteinase; protease, norovirus, calicivirus, viral protein; 1.50A {Norwalk virus} PDB: 2fyr_A 2iph_A* 1wqs_A*
Probab=74.15 E-value=18 Score=30.96 Aligned_cols=135 Identities=20% Similarity=0.287 Sum_probs=73.4
Q ss_pred eEEEEEEEcCCCeEEecccccC-CCCcEEEEeCCCcEEEEEEEEEcCCCCEEEEEEcCCC-CCCcceecCCCCCCCCCcE
Q 013014 152 GSGSGFVWDSKGHVVTNYHVIR-GASDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDAPK-DKLRPIPIGVSADLLVGQK 229 (451)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHVv~-~~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~~~-~~~~~l~l~~s~~~~~G~~ 229 (451)
+.|-||-|++. ..+|+.||+. ++.++. | .+-..+.++..-+++.+++..+. .+++-..|... ...|+-
T Consensus 26 gsgwgfwVS~~-~fIT~tHV~p~~~~e~f-----G--~p~~~i~v~~~GEf~~~rfpk~~rpdvsgmiLEeg--~peGtV 95 (194)
T 2fyq_A 26 GSGWGFWVSPT-VFITTTHVVPTGVKEFF-----G--EPLSSIAIHQAGEFTQFRFSKKMRPDLTGMVLEEG--CPEGTV 95 (194)
T ss_dssp TTEEEEESSSS-EEEEEGGGSCSSCSEET-----T--EEGGGEEEEEETTEEEEEESSCSCTTSCCCEECSS--CCTTCE
T ss_pred cCceeEEEccc-EEEEEeeecCCCChhhc-----C--ceeeeEEEeecCcEEEEEcCCCcCCCCcceEEecC--CCCCcE
Confidence 57889999876 9999999994 444322 1 01112234445578888887543 23455555322 233765
Q ss_pred EEE-eeCCCCCC--CceEEeEEeeeeeeeccCCCCCCcccEEEE-------cccCCCCCCCCceeCCCc---eEEEEEee
Q 013014 230 VYA-IGNPFGLD--HTLTTGVISGLRREISSAATGRPIQDVIQT-------DAAINPGNSGGPLLDSSG---SLIGINTA 296 (451)
Q Consensus 230 V~~-iG~p~g~~--~~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~-------d~~i~~G~SGGPlvd~~G---~VVGI~s~ 296 (451)
+.+ +-.+.+.. ..+..|.+......-... .....++.+ |-...||+-|.|-+-..| -|+||+++
T Consensus 96 ~silikR~sgellPlaVRmgt~as~kIqGk~v---~gqtGmlltganaK~mdLGT~PGDCGcPYvykrgndwvv~GVH~A 172 (194)
T 2fyq_A 96 CSVLIKRDSGELLPLAVRMGAIASMRIQGRLV---HGQSGMLLTGANAKGMDLGTIPGDCGAPYVHKRGNDWVVCGVHAA 172 (194)
T ss_dssp EEEEEECTTSCEEEEEEEEEEEEEEEETTEEE---EEEEEEECC-----------CGGGTTCEEEEEETTEEEEEEEEEE
T ss_pred EEEEEecCCCCcceEEEEecceeeeEEeeeEe---cceeeeEEecCCcccCcCCCCCCCCCCceEEeeCCceEEEEEEEe
Confidence 554 44454432 245555554433210000 001223332 334568999999986543 49999998
Q ss_pred eeC
Q 013014 297 IYS 299 (451)
Q Consensus 297 ~~~ 299 (451)
...
T Consensus 173 atr 175 (194)
T 2fyq_A 173 ATK 175 (194)
T ss_dssp ECS
T ss_pred ecc
Confidence 643
No 351
>4hcz_A PHD finger protein 1; protein-peptide complex, tudor, histone binding, H3K36ME3, N nucleus, transcription; HET: M3L; 1.85A {Homo sapiens}
Probab=61.78 E-value=27 Score=24.72 Aligned_cols=38 Identities=16% Similarity=0.340 Sum_probs=33.5
Q ss_pred cCCCCcEEEEeCCCcEEEEEEEEEcCCCCEEEEEEcCC
Q 013014 172 IRGASDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDAP 209 (451)
Q Consensus 172 v~~~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~~ 209 (451)
+....++.++..||.-|.++++.++...+-+++++++.
T Consensus 4 f~~GedVLarwsDG~fYlGtI~~V~~~~~~clV~F~D~ 41 (58)
T 4hcz_A 4 LWEGQDVLARWTDGLLYLGTIKKVDSAREVCLVQFEDD 41 (58)
T ss_dssp CCTTCEEEEECTTSCEEEEEEEEEETTTTEEEEEETTS
T ss_pred cccCCEEEEEecCCCEEeEEEEEEecCCCEEEEEEcCC
Confidence 44567888999999999999999999999999999863
No 352
>2eqj_A Metal-response element-binding transcription factor 2; structure genomics,tudor domain, zinc-regulated factor 1, ZIRF1; NMR {Mus musculus}
Probab=51.44 E-value=45 Score=24.28 Aligned_cols=37 Identities=14% Similarity=0.193 Sum_probs=32.4
Q ss_pred cCCCCcEEEEeCCCcEEEEEEEEEcCCCCEEEEEEcC
Q 013014 172 IRGASDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDA 208 (451)
Q Consensus 172 v~~~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~ 208 (451)
......+..+..||.-|+|+|..++....-+++++.+
T Consensus 14 f~vGddVLA~wtDGl~Y~gtI~~V~~~~gtC~V~F~D 50 (66)
T 2eqj_A 14 FEEGQDVLARWSDGLFYLGTIKKINILKQSCFIIFED 50 (66)
T ss_dssp SCTTCEEEEECTTSCEEEEEEEEEETTTTEEEEEETT
T ss_pred ccCCCEEEEEEccCcEEEeEEEEEccCCcEEEEEEcc
Confidence 3445678888899999999999999999999999985
No 353
>3s6n_G Small nuclear ribonucleoprotein G; SMN complex, SMN-gemin2 complex, U-rich snRNA, SM fold, SM C SNRNPS, snRNP biogenesis, PRE-mRNA splicing; 2.50A {Homo sapiens} PDB: 2y9b_G 2y9c_G 2y9d_G 3cw1_G 3pgw_G* 2y9a_G
Probab=48.60 E-value=49 Score=24.45 Aligned_cols=33 Identities=9% Similarity=0.161 Sum_probs=29.6
Q ss_pred CcEEEEeCCCcEEEEEEEEEcCCCCEEEEEEcC
Q 013014 176 SDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDA 208 (451)
Q Consensus 176 ~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~ 208 (451)
..+.|.+.+|+.+.+++.++|...++.+=....
T Consensus 15 k~V~V~Lk~gr~~~G~L~~~D~~mNlvL~~~~e 47 (76)
T 3s6n_G 15 KKLSLKLNGGRHVQGILRGFDPFMNLVIDECVE 47 (76)
T ss_dssp CEEEEEETTTEEEEEEEEEECTTCCEEEEEEEE
T ss_pred CeEEEEECCCcEEEEEEEEECCcceEEEeceEE
Confidence 468899999999999999999999999888764
No 354
>2o8m_A Protease; NS3, NS4A, viral protein; 2.00A {Hepatitis c virus} PDB: 3lon_A* 2a4g_A* 2a4q_A* 2fm2_A* 2obo_A* 2obq_A 2a4r_A* 2oc1_A* 2oc7_A* 2oc8_A* 3eyd_A* 3kf2_A 3kn2_A* 3knx_A* 2oc0_A* 3lox_A* 2oin_A 1rtl_A* 1rgq_A* 2f9v_A* ...
Probab=46.81 E-value=12 Score=33.30 Aligned_cols=42 Identities=36% Similarity=0.689 Sum_probs=28.7
Q ss_pred CCCCCCCceeCCCceEEEEEeeeeCCCCCccceeEEEeccCch
Q 013014 275 NPGNSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVN 317 (451)
Q Consensus 275 ~~G~SGGPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~ 317 (451)
..|.||+||+-+.|++|||........+-...+-| +|.+.+.
T Consensus 146 ykGssgaPllCe~gh~vGly~~~VC~rG~ik~~~f-~p~e~~~ 187 (200)
T 2o8m_A 146 LKGSAGGPLLCPAGHAVGLFRAAVCTRGVAKAVDF-IPVENLE 187 (200)
T ss_dssp TTTCTTCEEECTTSCEEEEEEEEEEETTEEEEEEE-EEHHHHH
T ss_pred EeCCCCCceeccCCceeeEEEEEEecCCceeeeEe-eeccccc
Confidence 56889999999999999987765444333334444 6664443
No 355
>3dor_A Protein CT_858, CPAF; mature CPAF, dimer, transferase; 2.20A {Chlamydia trachomatis} PDB: 3dpm_A* 3dpn_A 3dja_A
Probab=44.25 E-value=27 Score=36.49 Aligned_cols=49 Identities=14% Similarity=0.070 Sum_probs=32.9
Q ss_pred CcEEEEECCEEcCCHHHHH-------------HHHh----------cCCCCCEEEEEEEE-CCeEEEEEEEee
Q 013014 382 GDIITSVNGKKVSNGSDLY-------------RILD----------QCKVGDELLLQGIK-QPPVLSDNLRLL 430 (451)
Q Consensus 382 GDiIl~vnG~~i~~~~dl~-------------~~l~----------~~~~g~~v~l~v~R-~g~~~~~~v~l~ 430 (451)
||.|++|||+++..+-+-. .++. ..-+-+.+++++.| +|+.+++++.-.
T Consensus 113 GdEIlsING~pv~e~Lek~~~~~Gsn~~a~~~~Al~~Lt~R~~~l~~~~p~~~~tlk~~~~~G~~~~v~~pW~ 185 (583)
T 3dor_A 113 GDELLEVDGAPVQDVLATLYGSNHKGTAAEESAALRTLFSRMASLGHKVPSGRTTLKIRRPFGTTREVRVKWR 185 (583)
T ss_dssp TCEEEEETTEEHHHHHHTTSCTTCCCCHHHHHHHHHHHTEEEGGGTCCCCCSEEEEEEECTTSCEEEEEEECE
T ss_pred CCEEEEECCccHHHHHHHHHHhcCCCcHHHHHHHHHHHhhhHHhhccCCCCCceEEEEECCCCcEEEEEeeeE
Confidence 9999999999998764322 1111 11234588888865 688888888643
No 356
>1h64_1 SnRNP SM-like protein; SM fold, spliceosome, snRNP core; 1.9A {Pyrococcus abyssi} SCOP: b.38.1.1 PDB: 1m8v_A*
Probab=43.98 E-value=37 Score=24.94 Aligned_cols=33 Identities=15% Similarity=0.412 Sum_probs=29.5
Q ss_pred CcEEEEeCCCcEEEEEEEEEcCCCCEEEEEEcC
Q 013014 176 SDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDA 208 (451)
Q Consensus 176 ~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~ 208 (451)
..+.|.+.||+.+.+++.++|...++.+=....
T Consensus 15 ~~V~V~l~~g~~~~G~L~~~D~~mNlvL~d~~e 47 (75)
T 1h64_1 15 KDVLVILKKGFEFRGRLIGYDIHLNVVLADAEM 47 (75)
T ss_dssp SEEEEEETTSEEEEEEEEEECTTCCEEEEEEEE
T ss_pred CEEEEEECCCCEEEEEEEEEeCCCCeEEeeEEE
Confidence 578999999999999999999999998877754
No 357
>1i4k_A Putative snRNP SM-like protein; core snRNP domain, RNA binding protein; HET: CIT; 2.50A {Archaeoglobus fulgidus} SCOP: b.38.1.1 PDB: 1i5l_A*
Probab=43.73 E-value=39 Score=24.92 Aligned_cols=33 Identities=15% Similarity=0.367 Sum_probs=29.5
Q ss_pred CcEEEEeCCCcEEEEEEEEEcCCCCEEEEEEcC
Q 013014 176 SDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDA 208 (451)
Q Consensus 176 ~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~ 208 (451)
..+.|.+.+|+.+.+++.++|...++.+=.+..
T Consensus 15 ~~V~V~L~~g~~~~G~L~~~D~~mNlvL~d~~e 47 (77)
T 1i4k_A 15 SPVIVRLKGGREFRGTLDGYDIHMNLVLLDAEE 47 (77)
T ss_dssp SEEEEEETTSCEEEEEEEEECTTCCEEEEEEEE
T ss_pred CEEEEEEcCCCEEEEEEEEEcCCCCeEEeeEEE
Confidence 568999999999999999999999998877754
No 358
>1th7_A SnRNP-2, small nuclear riboprotein protein; archaea, SM protein, SM fold, SS-SM1, RNA binding protein; 1.68A {Sulfolobus solfataricus} SCOP: b.38.1.1
Probab=42.59 E-value=40 Score=25.26 Aligned_cols=33 Identities=9% Similarity=0.190 Sum_probs=29.7
Q ss_pred CcEEEEeCCCcEEEEEEEEEcCCCCEEEEEEcC
Q 013014 176 SDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDA 208 (451)
Q Consensus 176 ~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~ 208 (451)
..+.|.+.||+.+.+++.++|...++.+=.+..
T Consensus 20 ~~V~V~l~~g~~~~G~L~~~D~~mNlvL~d~~e 52 (81)
T 1th7_A 20 NLVLVKLKGNKEVRGMLRSYDQHMNLVLSDSEE 52 (81)
T ss_dssp SEEEEEETTTEEEEEEEEEECTTCCEEEEEEEE
T ss_pred CeEEEEEcCCcEEEEEEEEEcCCCCEEEccEEE
Confidence 468999999999999999999999999888764
No 359
>1d3b_B Protein (small nuclear ribonucleoprotein associat B); snRNP, splicing, core snRNP domain, systemic lupus eryth SLE, RNA binding protein; HET: CIT; 2.00A {Homo sapiens} SCOP: b.38.1.1 PDB: 2y9a_A 2y9b_A 2y9c_A 2y9d_A
Probab=41.32 E-value=37 Score=26.04 Aligned_cols=33 Identities=15% Similarity=0.300 Sum_probs=29.3
Q ss_pred CcEEEEeCCCcEEEEEEEEEcCCCCEEEEEEcC
Q 013014 176 SDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDA 208 (451)
Q Consensus 176 ~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~ 208 (451)
..+.|.+.||+.+.+++.++|...++.|=....
T Consensus 15 k~V~V~l~~gr~~~G~L~~~D~~mNlvL~d~~E 47 (91)
T 1d3b_B 15 YRMRCILQDGRIFIGTFKAFDKHMNLILCDCDE 47 (91)
T ss_dssp SEEEEEETTCCEEEEEEEECCTTCCEEEEEEEE
T ss_pred CcEEEEECCCeEEEEEEEEECCCCeEEecCEEE
Confidence 468999999999999999999999998877653
No 360
>1mgq_A SM-like protein; LSM, RNA-binding, archea, RNA binding protein; 1.70A {Methanothermobacterthermautotrophicus} SCOP: b.38.1.1 PDB: 1i81_A 1loj_A* 1jbm_A 1jri_A
Probab=39.91 E-value=46 Score=25.08 Aligned_cols=33 Identities=9% Similarity=0.269 Sum_probs=29.5
Q ss_pred CcEEEEeCCCcEEEEEEEEEcCCCCEEEEEEcC
Q 013014 176 SDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDA 208 (451)
Q Consensus 176 ~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~ 208 (451)
..+.|.+.||+.+.+++.++|...++.+=.+..
T Consensus 26 ~~V~V~Lk~g~~~~G~L~~~D~~mNlvL~d~~e 58 (83)
T 1mgq_A 26 SPVIIKLKGDREFRGVLKSFDLHMNLVLNDAEE 58 (83)
T ss_dssp SEEEEEETTTEEEEEEEEEECTTCCEEEEEEEE
T ss_pred CEEEEEEcCCcEEEEEEEEECCCceeEEccEEE
Confidence 478999999999999999999999998877754
No 361
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=39.79 E-value=14 Score=31.44 Aligned_cols=21 Identities=33% Similarity=0.553 Sum_probs=18.8
Q ss_pred CCCCCCceeCCCceEEEEEee
Q 013014 276 PGNSGGPLLDSSGSLIGINTA 296 (451)
Q Consensus 276 ~G~SGGPlvd~~G~VVGI~s~ 296 (451)
.+.++-|++|.+|+++|+++.
T Consensus 47 ~~~~~~pVvd~~g~lvGiit~ 67 (170)
T 4esy_A 47 HQIGCAPVVDQNGHLVGIITE 67 (170)
T ss_dssp TTCSEEEEECTTSCEEEEEEG
T ss_pred cCCeEEEEEcCCccEEEEEEH
Confidence 577899999999999999985
No 362
>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=39.47 E-value=5 Score=32.94 Aligned_cols=25 Identities=16% Similarity=-0.076 Sum_probs=21.9
Q ss_pred CCCCCEEEEEEEECCeEEEEEEEee
Q 013014 406 CKVGDELLLQGIKQPPVLSDNLRLL 430 (451)
Q Consensus 406 ~~~g~~v~l~v~R~g~~~~~~v~l~ 430 (451)
..+|+++.++|+|+|+.+++++++.
T Consensus 5 ~~~g~~v~l~v~R~g~~~~v~v~~~ 29 (128)
T 1uf1_A 5 SSGDRRSTLHLLQGGDEKKVNLVLG 29 (128)
T ss_dssp CSTTTSCCSCCCCCSSEEEEEEECC
T ss_pred CCCCCEEEEEEEeCCcEEEEEEEEC
Confidence 4689999999999999999998874
No 363
>1d3b_A Protein (small nuclear ribonucleoprotein SM D3); snRNP, splicing, core snRNP domain, systemic lupus eryth SLE, RNA binding protein; HET: CIT; 2.00A {Homo sapiens} SCOP: b.38.1.1
Probab=38.19 E-value=58 Score=24.01 Aligned_cols=33 Identities=9% Similarity=0.203 Sum_probs=29.5
Q ss_pred CcEEEEeCCCcEEEEEEEEEcCCCCEEEEEEcC
Q 013014 176 SDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDA 208 (451)
Q Consensus 176 ~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~ 208 (451)
..+.|.+.+|+.|.+++.++|...++.+=.+..
T Consensus 16 ~~V~VeLk~g~~~~G~L~~~D~~MNl~L~~~~e 48 (75)
T 1d3b_A 16 HIVTCETNTGEVYRGKLIEAEDNMNCQMSNITV 48 (75)
T ss_dssp SEEEEEETTSCEEEEEEEEECTTCCEEEEEEEE
T ss_pred CEEEEEECCCcEEEEEEEEEccceeEEEEeEEE
Confidence 468899999999999999999999999887764
No 364
>1z8r_A Coxsackievirus B4 polyprotein; beta barrel coordinated zinc ION, hydrolase; NMR {Human coxsackievirus B4}
Probab=37.51 E-value=56 Score=28.17 Aligned_cols=31 Identities=29% Similarity=0.422 Sum_probs=24.7
Q ss_pred cEEEEcccCCCCCCCCceeCCCceEEEEEeee
Q 013014 266 DVIQTDAAINPGNSGGPLLDSSGSLIGINTAI 297 (451)
Q Consensus 266 ~~i~~d~~i~~G~SGGPlvd~~G~VVGI~s~~ 297 (451)
.++.-..+..||+=||.|.- +.-||||++++
T Consensus 113 ~vl~~~G~~epGDCGG~L~C-~HGviGivTaG 143 (166)
T 1z8r_A 113 HVLLATGFSEPGDAGGILRC-EHGVIGLVTMG 143 (166)
T ss_dssp SEEEEECSSSCCCCBSEEEC-SSSEEEEEEEE
T ss_pred cEEEEecCCCCCCCCceeee-CCCceEEEecC
Confidence 44455677889999999995 56799999986
No 365
>4emk_B U6 snRNA-associated SM-like protein LSM6; SM fold, mRNA decay and PRE-mRNA splicing, LSM proteins, RNA protein; 2.30A {Schizosaccharomyces pombe} PDB: 3swn_B
Probab=37.41 E-value=43 Score=24.65 Aligned_cols=32 Identities=13% Similarity=0.271 Sum_probs=28.3
Q ss_pred CcEEEEeCCCcEEEEEEEEEcCCCCEEEEEEc
Q 013014 176 SDIRVTFADQSAYDAKIVGFDQDKDVAVLRID 207 (451)
Q Consensus 176 ~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~ 207 (451)
..+.|.+.+|+.+.+++.++|...++.+=.+.
T Consensus 15 k~V~V~Lk~g~~~~G~L~~~D~~mNlvL~d~~ 46 (75)
T 4emk_B 15 KKVLIRLSSGVDYKGILSCLDGYMNLALERTE 46 (75)
T ss_dssp SEEEEECTTSCEEEEEEEEECTTCEEEEEEEE
T ss_pred CeEEEEEcCCcEEEEEEEEEcCcceEEEccEE
Confidence 57899999999999999999999988877664
No 366
>3s6n_F Small nuclear ribonucleoprotein F; SMN complex, SMN-gemin2 complex, U-rich snRNA, SM fold, SM C SNRNPS, snRNP biogenesis, PRE-mRNA splicing; 2.50A {Homo sapiens} PDB: 2y9b_F 2y9c_F 2y9d_F 3cw1_F 3pgw_F* 2y9a_F
Probab=37.17 E-value=56 Score=24.88 Aligned_cols=32 Identities=13% Similarity=0.187 Sum_probs=28.9
Q ss_pred CcEEEEeCCCcEEEEEEEEEcCCCCEEEEEEc
Q 013014 176 SDIRVTFADQSAYDAKIVGFDQDKDVAVLRID 207 (451)
Q Consensus 176 ~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~ 207 (451)
..+.|.+.+|+.|.+++.++|...++.+=.+.
T Consensus 17 k~V~V~Lk~g~~~~G~L~~~D~~mNlvL~d~~ 48 (86)
T 3s6n_F 17 KPVMVKLKWGMEYKGYLVSVDGYMNMQLANTE 48 (86)
T ss_dssp SEEEEEETTSCEEEEEEEEECTTCCEEEEEEE
T ss_pred CeEEEEEcCCeEEEEEEEEEcCceEEEEeeEE
Confidence 57899999999999999999999999887775
No 367
>1y96_A Gemin6, SIP2, GEM-associated protein 6; SM fold, protein complex, RNA binding protein; 2.00A {Homo sapiens}
Probab=37.05 E-value=78 Score=24.28 Aligned_cols=32 Identities=16% Similarity=0.399 Sum_probs=27.9
Q ss_pred CcEEEEeCCCcEEEEEEEEEcC-CCCEEEEEEc
Q 013014 176 SDIRVTFADQSAYDAKIVGFDQ-DKDVAVLRID 207 (451)
Q Consensus 176 ~~i~V~~~dg~~~~a~vv~~d~-~~DlAlLkv~ 207 (451)
.++.|.+.||+.|.+.+..+|| ...+.|+...
T Consensus 18 KeV~V~l~dg~~y~G~l~tvDp~s~sIvL~n~~ 50 (86)
T 1y96_A 18 KEVRVTASEKNEYKGWVLTTDPVSANIVLVNFL 50 (86)
T ss_dssp CEEEEEETTTEEEEEEEEEECTTTCCEEEEEEC
T ss_pred CEEEEEEcCCCEEEEEEEEECCCceEEEEeecc
Confidence 4689999999999999999995 5699998873
No 368
>4emg_A Probable U6 snRNA-associated SM-like protein LSM3; SM fold, mRNA decay, LSM proteins, RNA binding protein; 2.70A {Schizosaccharomyces pombe}
Probab=36.59 E-value=54 Score=25.39 Aligned_cols=33 Identities=6% Similarity=0.232 Sum_probs=29.4
Q ss_pred CcEEEEeCCCcEEEEEEEEEcCCCCEEEEEEcC
Q 013014 176 SDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDA 208 (451)
Q Consensus 176 ~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~ 208 (451)
..+.|.+.+|+.|.+++.++|...++.+=....
T Consensus 20 ~~V~V~l~~gr~~~G~L~~~D~~mNlvL~d~~E 52 (93)
T 4emg_A 20 EIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEE 52 (93)
T ss_dssp SEEEEEETTTEEEEEEEEEECTTCCEEEEEEEE
T ss_pred CEEEEEECCCcEEEEEEEEECCcccEEeecEEE
Confidence 578999999999999999999999998877753
No 369
>1ljo_A Archaeal SM-like protein AF-SM2; snRNP, core snRNP domain, RNA binding protein, unknown F; 1.95A {Archaeoglobus fulgidus} SCOP: b.38.1.1
Probab=36.48 E-value=61 Score=23.88 Aligned_cols=33 Identities=18% Similarity=0.210 Sum_probs=29.3
Q ss_pred CcEEEEeCCC-cEEEEEEEEEcCCCCEEEEEEcC
Q 013014 176 SDIRVTFADQ-SAYDAKIVGFDQDKDVAVLRIDA 208 (451)
Q Consensus 176 ~~i~V~~~dg-~~~~a~vv~~d~~~DlAlLkv~~ 208 (451)
..+.|.+.+| +.+.+++.++|...++.+=.+..
T Consensus 16 ~~v~V~lk~g~~~~~G~L~~~D~~mNlvL~d~~e 49 (77)
T 1ljo_A 16 KIIRVEMKGEENQLVGKLEGVDDYMNLYLTNAME 49 (77)
T ss_dssp SEEEEEETTCSSEEEEEEEEECTTCCEEEEEEEE
T ss_pred CEEEEEEeCCCEEEEEEEEEECCcceEEEeeEEE
Confidence 5688999999 99999999999999998887754
No 370
>2jvf_A De novo protein M7; tetrapeptide fragment-based protein design, artificial fold; NMR {Unidentified} SCOP: k.41.1.1
Probab=36.12 E-value=40 Score=24.82 Aligned_cols=21 Identities=5% Similarity=0.124 Sum_probs=17.7
Q ss_pred CEEEEEEEECCeEEEEEEEee
Q 013014 410 DELLLQGIKQPPVLSDNLRLL 430 (451)
Q Consensus 410 ~~v~l~v~R~g~~~~~~v~l~ 430 (451)
-.++++++|||+++++.+.+.
T Consensus 6 vditikiqrdgqeieidirvs 26 (96)
T 2jvf_A 6 VDITIKIQRDGQEIEIDIRVS 26 (96)
T ss_dssp CEEEEEEEETTEEEEEEEECC
T ss_pred EEEEEEEeeCCeEEEEEEEEc
Confidence 357889999999999988864
No 371
>4emk_A U6 snRNA-associated SM-like protein LSM5; SM fold, mRNA decay and PRE-mRNA splicing, LSM proteins, RNA protein; 2.30A {Schizosaccharomyces pombe} PDB: 3swn_A
Probab=35.81 E-value=56 Score=25.45 Aligned_cols=33 Identities=18% Similarity=0.464 Sum_probs=29.1
Q ss_pred CcEEEEeCCCcEEEEEEEEEcCCCCEEEEEEcC
Q 013014 176 SDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDA 208 (451)
Q Consensus 176 ~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~ 208 (451)
..+.|.+.+|+.|.+++.++|...++.|=.+..
T Consensus 31 k~V~V~Lk~gr~~~G~L~gfD~~mNlvL~d~~E 63 (94)
T 4emk_A 31 SNLWVIMKSEREFAGTLVGFDDYVNIVLKDVTE 63 (94)
T ss_dssp SEEEEEESSSEEEEEEEEEECTTCCEEEEEEEE
T ss_pred CeEEEEECCCcEEEEEEEEEcccCCeEeeeEEE
Confidence 468999999999999999999999998877653
No 372
>1b34_A Protein (small nuclear ribonucleoprotein SM D1); snRNP, splicing, spliceosome, core snRNP domain, systemi erythematosus, SLE, RNA binding protein; 2.50A {Homo sapiens} SCOP: b.38.1.1 PDB: 2y9a_B 2y9b_B 2y9c_B 2y9d_B 3cw1_B 3pgw_X* 3s6n_A
Probab=35.76 E-value=71 Score=25.91 Aligned_cols=61 Identities=10% Similarity=0.199 Sum_probs=41.5
Q ss_pred CcEEEEeCCCcEEEEEEEEEcCCCCEEEEEEcCCCCCCcceecCCCCCCCCCcEEEEeeCCCC
Q 013014 176 SDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDAPKDKLRPIPIGVSADLLVGQKVYAIGNPFG 238 (451)
Q Consensus 176 ~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~~~~~~~~l~l~~s~~~~~G~~V~~iG~p~g 238 (451)
..+.|.+.+|..|.+++..+|...++.|=.+......-....++ .-+-.|+.|..+.-|..
T Consensus 13 k~V~V~Lk~g~~~~G~L~~~D~~MNlvL~d~~e~~~~~~~~~lg--~v~IRG~nI~~I~~pd~ 73 (119)
T 1b34_A 13 ETVTIELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREPVQLE--TLSIRGNNIRYFILPDS 73 (119)
T ss_dssp CEEEEEETTCCEEEEEEEEECTTCCEEEEEEEEECTTSCCEEEE--EEEECGGGEEEEECCTT
T ss_pred CEEEEEEcCCCEEEEEEEEEcccceEEeccEEEecCCCceeEcc--eEEEcCCeEEEEEeccc
Confidence 47889999999999999999999999888776422111223332 11334677777766644
No 373
>2hrv_A 2A cysteine proteinase; hydrolase (cysteine proteinase); 1.95A {Human rhinovirus 2} SCOP: b.47.1.4
Probab=35.54 E-value=84 Score=26.41 Aligned_cols=31 Identities=35% Similarity=0.589 Sum_probs=24.5
Q ss_pred cEEEEcccCCCCCCCCceeCCCceEEEEEeee
Q 013014 266 DVIQTDAAINPGNSGGPLLDSSGSLIGINTAI 297 (451)
Q Consensus 266 ~~i~~d~~i~~G~SGGPlvd~~G~VVGI~s~~ 297 (451)
.++.-..+..||+=||.|.- +.-||||++++
T Consensus 93 ~~l~g~G~~epGDCGG~L~C-~HGviGivTaG 123 (142)
T 2hrv_A 93 NLLIGEGPCEPGDCGGKLLC-KHGVIGIVTAG 123 (142)
T ss_dssp EEEEEECCCCTTCTTCEEEE-TTEEEEEEEEE
T ss_pred cEEEEEcCCCCCCCCceeee-CCCceEEEecC
Confidence 34445667889999999994 56799999986
No 374
>1i8f_A Putative snRNP SM-like protein; beta barrel-like SMAP monomers form 35-stranded beta-sheet I heptamer, structural genomics; 1.75A {Pyrobaculum aerophilum} SCOP: b.38.1.1 PDB: 1lnx_A*
Probab=35.15 E-value=44 Score=25.02 Aligned_cols=33 Identities=15% Similarity=0.270 Sum_probs=29.4
Q ss_pred CcEEEEeCCCcEEEEEEEEEcCCCCEEEEEEcC
Q 013014 176 SDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDA 208 (451)
Q Consensus 176 ~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~ 208 (451)
..+.|.+.+|+.+.+++.++|...++.+=....
T Consensus 22 ~~V~V~l~~g~~~~G~L~~~D~~mNlvL~d~~e 54 (81)
T 1i8f_A 22 KQVLVKLRDSHEIRGILRSFDQHVNLLLEDAEE 54 (81)
T ss_dssp SEEEEEEGGGEEEEEEEEEECTTCCEEEEEEEE
T ss_pred CeEEEEEcCCcEEEEEEEEEcCCCeeEEccEEE
Confidence 478999999999999999999999998877754
No 375
>4emk_C U6 snRNA-associated SM-like protein LSM7; SM fold, mRNA decay and PRE-mRNA splicing, LSM proteins, RNA protein; 2.30A {Schizosaccharomyces pombe} PDB: 3swn_C
Probab=35.02 E-value=58 Score=26.27 Aligned_cols=33 Identities=21% Similarity=0.366 Sum_probs=29.4
Q ss_pred CcEEEEeCCCcEEEEEEEEEcCCCCEEEEEEcC
Q 013014 176 SDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDA 208 (451)
Q Consensus 176 ~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~ 208 (451)
..+.|.+.||+.+.+++.++|...+|.|=.+..
T Consensus 34 k~V~V~L~dGr~~~G~L~~fD~~mNLVL~d~~E 66 (113)
T 4emk_C 34 QRIQATFTGGRQITGILKGFDQLMNLVLDDVEE 66 (113)
T ss_dssp SEEEEEETTSCEEEEEEEEECTTCCEEEEEEEE
T ss_pred CcEEEEEeCCeEEEEEEEEEcCcccEEEeeEEE
Confidence 578899999999999999999999999877754
No 376
>2m0o_A PHD finger protein 1; tudor domain, H3K36ME3 binding, peptide binding protein; HET: M3L; NMR {Homo sapiens}
Probab=33.63 E-value=45 Score=24.97 Aligned_cols=36 Identities=17% Similarity=0.348 Sum_probs=30.6
Q ss_pred CCCcEEEEeCCCcEEEEEEEEEcCCCCEEEEEEcCC
Q 013014 174 GASDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDAP 209 (451)
Q Consensus 174 ~~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~~ 209 (451)
..+++.++..||.-|.++++.++...+-+++++++.
T Consensus 29 eGeDVLarwsDGlfYLGTI~kV~~~~e~ClV~F~D~ 64 (79)
T 2m0o_A 29 EGQDVLARWTDGLLYLGTIKKVDSAREVCLVQFEDD 64 (79)
T ss_dssp TTCEEEBCCTTSCCCEEEEEEEETTTTEEEEEETTS
T ss_pred cCCEEEEEecCCCEEeEEEEEeccCCCEEEEEEcCC
Confidence 345667777899999999999999999999999864
No 377
>1b34_B Protein (small nuclear ribonucleoprotein SM D2); snRNP, splicing, spliceosome, core snRNP domain, systemi erythematosus, SLE, RNA binding protein; 2.50A {Homo sapiens} SCOP: b.38.1.1 PDB: 2y9a_C 2y9b_C 2y9c_C 2y9d_C 3cw1_C 3pgw_Y* 3s6n_B
Probab=33.39 E-value=61 Score=26.22 Aligned_cols=34 Identities=6% Similarity=0.261 Sum_probs=30.5
Q ss_pred CCcEEEEeCCCcEEEEEEEEEcCCCCEEEEEEcC
Q 013014 175 ASDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDA 208 (451)
Q Consensus 175 ~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~ 208 (451)
...+.|.+.+|+.+.+++.++|...++.|=.+..
T Consensus 39 ~k~V~V~Lk~gr~~~G~L~~fD~~mNlvL~d~~E 72 (118)
T 1b34_B 39 NTQVLINCRNNKKLLGRVKAFDRHCNMVLENVKE 72 (118)
T ss_dssp TCEEEEEETTSCEEEEEEEEECTTCCEEEEEEEE
T ss_pred CcEEEEEECCCcEEEEEEEEeCCceEEEEeCEEE
Confidence 3678999999999999999999999999987764
No 378
>3bw1_A SMX4 protein, U6 snRNA-associated SM-like protein LSM3; RNA-binding protein, SM protein, ring, HOMO octamer, mRNA processing; 2.50A {Saccharomyces cerevisiae}
Probab=33.35 E-value=49 Score=25.73 Aligned_cols=32 Identities=6% Similarity=0.171 Sum_probs=28.9
Q ss_pred CcEEEEeCCCcEEEEEEEEEcCCCCEEEEEEc
Q 013014 176 SDIRVTFADQSAYDAKIVGFDQDKDVAVLRID 207 (451)
Q Consensus 176 ~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~ 207 (451)
..+.|.+.+|+.+.+++.++|...++.|=...
T Consensus 21 k~V~V~Lk~gr~~~G~L~~fD~~mNlVL~d~~ 52 (96)
T 3bw1_A 21 ERVYIKLRGARTLVGTLQAFDSHCNIVLSDAV 52 (96)
T ss_dssp SEEEEEEGGGCEEEEEEEEECTTCCEEEEEEE
T ss_pred CeEEEEECCCcEEEEEEEEECCCCcEEEcCEE
Confidence 56899999999999999999999999887765
No 379
>2e5p_A Protein PHF1, PHD finger protein 1; tudor domain, PHF1 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=33.22 E-value=1.3e+02 Score=21.91 Aligned_cols=37 Identities=16% Similarity=0.324 Sum_probs=32.1
Q ss_pred CCCCcEEEEeCCCcEEEEEEEEEcCCCCEEEEEEcCC
Q 013014 173 RGASDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDAP 209 (451)
Q Consensus 173 ~~~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~~ 209 (451)
....++..+..||.-|.+++..++....-+++++++.
T Consensus 11 ~eGqdVLarWsDGlfYlGtV~kV~~~~~~ClV~FeD~ 47 (68)
T 2e5p_A 11 WEGQDVLARWTDGLLYLGTIKKVDSAREVCLVQFEDD 47 (68)
T ss_dssp CTTCEEEEECTTSSEEEEEEEEEETTTTEEEEEETTT
T ss_pred ccCCEEEEEecCCcEEEeEEEEEecCCcEEEEEEccC
Confidence 3456788889999999999999999999999999863
No 380
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=31.86 E-value=22 Score=29.91 Aligned_cols=22 Identities=9% Similarity=0.154 Sum_probs=18.8
Q ss_pred CCCCCCCceeCCCceEEEEEee
Q 013014 275 NPGNSGGPLLDSSGSLIGINTA 296 (451)
Q Consensus 275 ~~G~SGGPlvd~~G~VVGI~s~ 296 (451)
..|.|+=||+|.+|+++|+++.
T Consensus 45 ~~~~s~~pVvd~~~~lvGiit~ 66 (156)
T 3k6e_A 45 QMTYTRVPVVTDEKQFVGTIGL 66 (156)
T ss_dssp TSSSSEEEEECC-CBEEEEEEH
T ss_pred HcCCcEEEEEcCCCcEEEEEEe
Confidence 4689999999999999999874
No 381
>4emh_A Probable U6 snRNA-associated SM-like protein LSM4; SM fold, mRNA decay, PRE-mRNA splicing, LSM proteins, RNA BI protein; 2.20A {Schizosaccharomyces pombe}
Probab=30.60 E-value=77 Score=25.18 Aligned_cols=32 Identities=9% Similarity=0.229 Sum_probs=28.9
Q ss_pred CcEEEEeCCCcEEEEEEEEEcCCCCEEEEEEc
Q 013014 176 SDIRVTFADQSAYDAKIVGFDQDKDVAVLRID 207 (451)
Q Consensus 176 ~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~ 207 (451)
..+.|.+.+|+.|.+++.++|...++.|=.+.
T Consensus 27 k~V~V~Lk~G~~~~G~L~~~D~~MNlvL~d~~ 58 (105)
T 4emh_A 27 RPILVELKNGETFNGHLENCDNYMNLTLREVI 58 (105)
T ss_dssp CEEEEEETTSCEEEEEEEEECTTCCEEEEEEE
T ss_pred CEEEEEECCCCEEEEEEEEEcCCceEEEEEEE
Confidence 46889999999999999999999999888775
No 382
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=29.16 E-value=26 Score=29.47 Aligned_cols=16 Identities=38% Similarity=0.571 Sum_probs=14.4
Q ss_pred CceeCCCceEEEEEee
Q 013014 281 GPLLDSSGSLIGINTA 296 (451)
Q Consensus 281 GPlvd~~G~VVGI~s~ 296 (451)
-||+|.+|+++||++.
T Consensus 118 lpVVd~~g~l~GiiT~ 133 (156)
T 3k6e_A 118 LPVVDAEGIFQGIITR 133 (156)
T ss_dssp EEEECTTSBEEEEEEH
T ss_pred eEEEecCCEEEEEEEH
Confidence 6899999999999875
No 383
>3pgw_B SM B; protein-RNA complex, U1 snRNA, SM fold, SM core, RRM, splici SNRNPS, splicing factors; HET: DNA; 4.40A {Homo sapiens} PDB: 3cw1_A
Probab=28.69 E-value=59 Score=29.72 Aligned_cols=33 Identities=15% Similarity=0.300 Sum_probs=28.4
Q ss_pred CcEEEEeCCCcEEEEEEEEEcCCCCEEEEEEcC
Q 013014 176 SDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDA 208 (451)
Q Consensus 176 ~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~ 208 (451)
..+.|.+.||+++.+++..+|...+|.|=.+++
T Consensus 15 KrV~V~LkdGRel~GtLkgFDq~MNLVL~Da~E 47 (231)
T 3pgw_B 15 YRMRCILQDGRIFIGTFKAFDKHMNLILCDCDE 47 (231)
T ss_pred CeEEEEECCCcEEEEEEEEEcccccEEecCEEE
Confidence 468899999999999999999999888766543
No 384
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=28.23 E-value=27 Score=27.67 Aligned_cols=20 Identities=20% Similarity=0.242 Sum_probs=16.3
Q ss_pred CCCCCceeCCCceEEEEEee
Q 013014 277 GNSGGPLLDSSGSLIGINTA 296 (451)
Q Consensus 277 G~SGGPlvd~~G~VVGI~s~ 296 (451)
+..--|++|.+|+++||++.
T Consensus 98 ~~~~lpVvd~~g~~~Giit~ 117 (127)
T 3nqr_A 98 RYHMAIVIDEFGGVSGLVTI 117 (127)
T ss_dssp TCCEEEEECTTSCEEEEEEH
T ss_pred CCeEEEEEeCCCCEEEEEEH
Confidence 44557899999999999874
No 385
>1n9r_A SMF, small nuclear ribonucleoprotein F, snRNP-F, SM protein F; heptamer, translation; 2.80A {Saccharomyces cerevisiae} SCOP: b.38.1.1 PDB: 1n9s_A
Probab=28.05 E-value=76 Score=24.54 Aligned_cols=34 Identities=12% Similarity=0.206 Sum_probs=29.7
Q ss_pred CCcEEEEeCCC-cEEEEEEEEEcCCCCEEEEEEcC
Q 013014 175 ASDIRVTFADQ-SAYDAKIVGFDQDKDVAVLRIDA 208 (451)
Q Consensus 175 ~~~i~V~~~dg-~~~~a~vv~~d~~~DlAlLkv~~ 208 (451)
...+.|.+.+| +.+.+++.++|...++.+=.+..
T Consensus 31 ~k~V~V~Lk~g~~~~~G~L~~~D~~MNlvL~d~~E 65 (93)
T 1n9r_A 31 NHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNEAEE 65 (93)
T ss_dssp TSEEEEEESSTTEEEEEEEEECCTTTCEEEEEEEE
T ss_pred CCEEEEEEcCCCEEEEEEEEEEccccEEEEeeEEE
Confidence 35789999999 99999999999999998877753
No 386
>2xk0_A Polycomb protein PCL; transcription, aromatic CAGE; NMR {Drosophila melanogaster}
Probab=27.91 E-value=1.1e+02 Score=22.33 Aligned_cols=38 Identities=24% Similarity=0.306 Sum_probs=30.2
Q ss_pred cccCCCCcEEEEeCCCcEEEEEEEEEcCCCCEEEEEEcCC
Q 013014 170 HVIRGASDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDAP 209 (451)
Q Consensus 170 HVv~~~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~~ 209 (451)
+.....+++.++..||.-|-++++ |...+=+++++++.
T Consensus 14 ~~~~~geDVL~rw~DG~fYLGtIV--d~~~~~ClV~FeD~ 51 (69)
T 2xk0_A 14 VTYALQEDVFIKCNDGRFYLGTII--DQTSDQYLIRFDDQ 51 (69)
T ss_dssp CCCCTTCEEEEECTTSCEEEEEEE--EECSSCEEEEETTC
T ss_pred cccccCCeEEEEecCCCEEEEEEE--ecCCceEEEEecCC
Confidence 445566788899999999999994 55568899999864
No 387
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=27.31 E-value=29 Score=28.02 Aligned_cols=20 Identities=25% Similarity=0.353 Sum_probs=16.3
Q ss_pred CCCCCceeCCCceEEEEEee
Q 013014 277 GNSGGPLLDSSGSLIGINTA 296 (451)
Q Consensus 277 G~SGGPlvd~~G~VVGI~s~ 296 (451)
+..--|++|.+|+++||++.
T Consensus 99 ~~~~~~Vvd~~g~lvGiit~ 118 (136)
T 3lfr_A 99 HNHMAIVIDEYGGVAGLVTI 118 (136)
T ss_dssp TCCEEEEECTTSCEEEEEEH
T ss_pred CCeEEEEEeCCCCEEEEEEH
Confidence 34457899999999999885
No 388
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=26.82 E-value=31 Score=27.36 Aligned_cols=19 Identities=32% Similarity=0.382 Sum_probs=15.6
Q ss_pred CCCCceeCCCceEEEEEee
Q 013014 278 NSGGPLLDSSGSLIGINTA 296 (451)
Q Consensus 278 ~SGGPlvd~~G~VVGI~s~ 296 (451)
...-|++|.+|+++|+++.
T Consensus 99 ~~~lpVvd~~g~~~Giit~ 117 (128)
T 3gby_A 99 CSVVPLADEDGRYEGVVSR 117 (128)
T ss_dssp SSEEEEECTTCBEEEEEEH
T ss_pred CcEEEEECCCCCEEEEEEH
Confidence 3446899999999999875
No 389
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=26.52 E-value=31 Score=27.65 Aligned_cols=20 Identities=25% Similarity=0.421 Sum_probs=16.1
Q ss_pred CCCCCceeCCCceEEEEEee
Q 013014 277 GNSGGPLLDSSGSLIGINTA 296 (451)
Q Consensus 277 G~SGGPlvd~~G~VVGI~s~ 296 (451)
+..--|++|.+|+++||++.
T Consensus 99 ~~~~~~Vvd~~g~lvGiit~ 118 (130)
T 3hf7_A 99 KKKVGLVVDEYGDIQGLVTV 118 (130)
T ss_dssp CCCEEEEECTTSCEEEEEEH
T ss_pred CCeEEEEEcCCCCEEEEeeH
Confidence 34457889999999999875
No 390
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=26.42 E-value=31 Score=27.49 Aligned_cols=20 Identities=20% Similarity=0.298 Sum_probs=16.2
Q ss_pred CCCCCceeCCCceEEEEEee
Q 013014 277 GNSGGPLLDSSGSLIGINTA 296 (451)
Q Consensus 277 G~SGGPlvd~~G~VVGI~s~ 296 (451)
+..--|++|.+|+++||++.
T Consensus 101 ~~~~~~Vvd~~g~~vGivt~ 120 (130)
T 3i8n_A 101 RLQLALVVDEYGTVLGLVTL 120 (130)
T ss_dssp TCCEEEEECTTSCEEEEEEH
T ss_pred CCeEEEEEcCCCCEEEEEEH
Confidence 44567889999999999874
No 391
>3by8_A Sensor protein DCUS; histidine kinase sensor domain, inner membrane, membrane, phosphoprotein, transferase, transmembrane; 1.45A {Escherichia coli} SCOP: d.110.6.1 PDB: 1ojg_A
Probab=25.63 E-value=33 Score=28.34 Aligned_cols=17 Identities=24% Similarity=0.374 Sum_probs=13.6
Q ss_pred CceeCCCceEEEEEeee
Q 013014 281 GPLLDSSGSLIGINTAI 297 (451)
Q Consensus 281 GPlvd~~G~VVGI~s~~ 297 (451)
.|+.|.+|++||+++.+
T Consensus 111 ~PV~~~~g~viGvv~vg 127 (142)
T 3by8_A 111 TPIYDENHKQIGVVAIG 127 (142)
T ss_dssp EEEECTTSCEEEEEEEE
T ss_pred EeEEcCCCCEEEEEEEe
Confidence 47887789999998753
No 392
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=25.54 E-value=31 Score=27.46 Aligned_cols=20 Identities=25% Similarity=0.375 Sum_probs=15.3
Q ss_pred CCCCCceeCCCceEEEEEee
Q 013014 277 GNSGGPLLDSSGSLIGINTA 296 (451)
Q Consensus 277 G~SGGPlvd~~G~VVGI~s~ 296 (451)
+..--|++|.+|+++||++.
T Consensus 98 ~~~~~pVvd~~g~~~Giit~ 117 (129)
T 3jtf_A 98 RNHLAIVIDEHGGISGLVTM 117 (129)
T ss_dssp SCCEEEEECC-CCEEEEEEH
T ss_pred CCeEEEEEeCCCCEEEEEEH
Confidence 44557889999999999875
No 393
>3d3r_A Hydrogenase assembly chaperone HYPC/HUPF; small beta-barrel, structural genomics, PSI-2, protein struc initiative; 1.85A {Shewanella oneidensis} SCOP: b.40.14.1
Probab=24.60 E-value=1e+02 Score=24.52 Aligned_cols=45 Identities=18% Similarity=0.287 Sum_probs=29.9
Q ss_pred EEEEEEEEcCCCCEEEEEEcCCCCCCcceecCCCC-CCCCCcEEEE-eeC
Q 013014 188 YDAKIVGFDQDKDVAVLRIDAPKDKLRPIPIGVSA-DLLVGQKVYA-IGN 235 (451)
Q Consensus 188 ~~a~vv~~d~~~DlAlLkv~~~~~~~~~l~l~~s~-~~~~G~~V~~-iG~ 235 (451)
++++++..+...++|++.+... ...+.+.--. ++++||+|++ +||
T Consensus 26 IP~kVveI~~~~~~A~Vd~~Gv---~reV~l~Lv~e~~~vGDyVLVHvGf 72 (103)
T 3d3r_A 26 IPSQVVAVDNERQSVTVDTLGV---RRDVSSHLMTEPLAIGDYVLIHIGF 72 (103)
T ss_dssp CCEEEEEEETTTTEEEEEETTE---EEEEECTTBSSCCCTTCEEEEEEEE
T ss_pred cCEEEEEEeCCCCEEEEEcCCE---EEEEEEEeecCCCCCCCEEEEeech
Confidence 5688888875558999988642 2334443222 4788999987 564
No 394
>2fwk_A U6 snRNA-associated SM-like protein LSM5; structural genomics, structural genomics consortium, SGC, DNA binding protein; 2.14A {Cryptosporidium parvum} SCOP: b.38.1.1 PDB: 3pgg_A
Probab=24.25 E-value=65 Score=26.21 Aligned_cols=32 Identities=16% Similarity=0.362 Sum_probs=27.9
Q ss_pred CcEEEEeCCCcEEEEEEEEEcCCCCEEEEEEc
Q 013014 176 SDIRVTFADQSAYDAKIVGFDQDKDVAVLRID 207 (451)
Q Consensus 176 ~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~ 207 (451)
..+.|.+.+|+.+.+++.++|...++.|=.+.
T Consensus 39 k~V~V~Lk~Gr~~~G~L~~fD~~mNlVL~d~~ 70 (121)
T 2fwk_A 39 NRIYVVMKGDKEFSGVLRGFDEYVNMVLDDVQ 70 (121)
T ss_dssp SBCEEEETTTEEECCEEEEECTTCCEEEESCC
T ss_pred CeEEEEECCCcEEEEEEEEEcccCCeEeceEE
Confidence 46899999999999999999999998876553
No 395
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=23.34 E-value=39 Score=26.20 Aligned_cols=20 Identities=35% Similarity=0.556 Sum_probs=16.2
Q ss_pred CCCCCceeCCCceEEEEEee
Q 013014 277 GNSGGPLLDSSGSLIGINTA 296 (451)
Q Consensus 277 G~SGGPlvd~~G~VVGI~s~ 296 (451)
+.+--|++|.+|+++|+++.
T Consensus 92 ~~~~l~Vvd~~g~~~Givt~ 111 (122)
T 3kpb_A 92 NISGVPVVDDYRRVVGIVTS 111 (122)
T ss_dssp TCSEEEEECTTCBEEEEEEH
T ss_pred CCCeEEEECCCCCEEEEEeH
Confidence 44567899988999999874
No 396
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=23.20 E-value=35 Score=28.09 Aligned_cols=20 Identities=25% Similarity=0.220 Sum_probs=16.3
Q ss_pred CCCCCceeCCCceEEEEEee
Q 013014 277 GNSGGPLLDSSGSLIGINTA 296 (451)
Q Consensus 277 G~SGGPlvd~~G~VVGI~s~ 296 (451)
+..--||+|.+|+++||++.
T Consensus 115 ~~~~lpVvd~~g~~vGivt~ 134 (153)
T 3oco_A 115 RVPMAIVIDEYGGTSGIITD 134 (153)
T ss_dssp TCSCEEEECTTSCEEEEECH
T ss_pred CCcEEEEEeCCCCEEEEeeH
Confidence 44567899999999999875
No 397
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=23.06 E-value=37 Score=28.10 Aligned_cols=20 Identities=25% Similarity=0.267 Sum_probs=16.1
Q ss_pred CCCCCceeCCCceEEEEEee
Q 013014 277 GNSGGPLLDSSGSLIGINTA 296 (451)
Q Consensus 277 G~SGGPlvd~~G~VVGI~s~ 296 (451)
+..--||+|.+|+++||++.
T Consensus 132 ~~~~~~Vvd~~g~~~Givt~ 151 (156)
T 3oi8_A 132 RNHMAIVIDEYGGTSGLVTF 151 (156)
T ss_dssp TCCEEEEECTTSSEEEEEEH
T ss_pred CCeEEEEECCCCCEEEEEEH
Confidence 34457899999999999874
No 398
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=22.94 E-value=38 Score=27.58 Aligned_cols=20 Identities=20% Similarity=0.157 Sum_probs=16.2
Q ss_pred CCCCCceeCCCceEEEEEee
Q 013014 277 GNSGGPLLDSSGSLIGINTA 296 (451)
Q Consensus 277 G~SGGPlvd~~G~VVGI~s~ 296 (451)
+..--|++|.+|+++||++.
T Consensus 117 ~~~~l~Vvd~~g~~~Giit~ 136 (148)
T 3lv9_A 117 KLQLAIVVDEYGGTSGVVTI 136 (148)
T ss_dssp TCSEEEEECTTSSEEEEEEH
T ss_pred CCeEEEEEeCCCCEEEEEEH
Confidence 34457899999999999875
No 399
>4a4f_A SurviVal of motor neuron-related-splicing factor; RNA binding protein; HET: 2MR; NMR {Homo sapiens} PDB: 4a4h_A*
Probab=22.34 E-value=2.1e+02 Score=20.13 Aligned_cols=35 Identities=17% Similarity=0.346 Sum_probs=27.4
Q ss_pred CCCcEEEEe-CCCcEEEEEEEEEcCCCCEEEEEEcC
Q 013014 174 GASDIRVTF-ADQSAYDAKIVGFDQDKDVAVLRIDA 208 (451)
Q Consensus 174 ~~~~i~V~~-~dg~~~~a~vv~~d~~~DlAlLkv~~ 208 (451)
-.+.....+ .||+.|+|++..++...+.+.+.+.+
T Consensus 11 vGd~c~A~~s~Dg~wYrA~I~~v~~~~~~~~V~fvd 46 (64)
T 4a4f_A 11 VGDKCMAVWSEDGQCYEAEIEEIDEENGTAAITFAG 46 (64)
T ss_dssp TTCEEEEECTTTSSEEEEEEEEEETTTTEEEEEETT
T ss_pred CCCEEEEEECCCCCEEEEEEEEEcCCCCEEEEEEEe
Confidence 344566676 59999999999999877788888864
No 400
>1p0z_A Sensor kinase CITA; transferase; HET: FLC MO7; 1.60A {Klebsiella pneumoniae} SCOP: d.110.6.1 PDB: 2v9a_A 2j80_A*
Probab=22.26 E-value=47 Score=26.88 Aligned_cols=18 Identities=39% Similarity=0.783 Sum_probs=14.6
Q ss_pred CceeCCCceEEEEEeeee
Q 013014 281 GPLLDSSGSLIGINTAIY 298 (451)
Q Consensus 281 GPlvd~~G~VVGI~s~~~ 298 (451)
.|++|.+|++||+++.+.
T Consensus 106 ~PV~~~~g~viGvv~vg~ 123 (131)
T 1p0z_A 106 SPIQDATGKVIGIVSVGY 123 (131)
T ss_dssp EEEECTTCCEEEEEEEEE
T ss_pred EeEECCCCCEEEEEEEEE
Confidence 478887899999988653
No 401
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=22.18 E-value=42 Score=27.30 Aligned_cols=14 Identities=29% Similarity=0.346 Sum_probs=0.0
Q ss_pred ceeCCCceEEEEEe
Q 013014 282 PLLDSSGSLIGINT 295 (451)
Q Consensus 282 Plvd~~G~VVGI~s 295 (451)
||+|.+|+++||++
T Consensus 120 ~Vvd~~g~~~Giit 133 (150)
T 3lqn_A 120 CAVNEDGYFEGILT 133 (150)
T ss_dssp EEECTTCBEEEEEE
T ss_pred EEECCCCcEEEEEE
No 402
>1m5q_A SMAP3, small nuclear ribonucleoprotein homolog, SM-like P; OB-like fold, B-sheet toroid, 14-MER, cadmium-binding site, translation; 2.00A {Pyrobaculum aerophilum} SCOP: b.38.1.1
Probab=22.18 E-value=1.3e+02 Score=24.74 Aligned_cols=33 Identities=9% Similarity=0.340 Sum_probs=29.8
Q ss_pred CcEEEEeCCCcEEEEEEEEEcCCCCEEEEEEcC
Q 013014 176 SDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDA 208 (451)
Q Consensus 176 ~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~ 208 (451)
..+.|.+.+|+.+.+++.++|...++.|=.+..
T Consensus 11 k~V~V~Lk~G~~~~G~L~~~D~~MNlvL~d~~E 43 (130)
T 1m5q_A 11 REVQVVLSNGEVYKGVLHAVDNQLNIVLANASN 43 (130)
T ss_dssp SEEEEEETTSCEEEEEEEEECTTCCEEEEEEEC
T ss_pred CeEEEEECCCcEEEEEEEEEcccceeEEeeEEE
Confidence 468899999999999999999999999888864
No 403
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=21.60 E-value=44 Score=26.70 Aligned_cols=20 Identities=25% Similarity=0.267 Sum_probs=16.0
Q ss_pred CCCCCceeCCCceEEEEEee
Q 013014 277 GNSGGPLLDSSGSLIGINTA 296 (451)
Q Consensus 277 G~SGGPlvd~~G~VVGI~s~ 296 (451)
+...-||+|.+|+++||++.
T Consensus 113 ~~~~l~Vvd~~g~~~Giit~ 132 (144)
T 2nyc_A 113 RVHRFFVVDDVGRLVGVLTL 132 (144)
T ss_dssp TCSEEEEECTTSBEEEEEEH
T ss_pred CCCEEEEECCCCCEEEEEEH
Confidence 34457899989999999875
No 404
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=21.31 E-value=43 Score=29.59 Aligned_cols=20 Identities=35% Similarity=0.493 Sum_probs=16.5
Q ss_pred CCCCCceeCCCceEEEEEee
Q 013014 277 GNSGGPLLDSSGSLIGINTA 296 (451)
Q Consensus 277 G~SGGPlvd~~G~VVGI~s~ 296 (451)
+..--||+|.+|+++||++.
T Consensus 146 ~~~~lpVVD~~g~lvGiIT~ 165 (205)
T 3kxr_A 146 REIELPVIDDAGELIGRVTL 165 (205)
T ss_dssp SCSEEEEECTTSBEEEEEEH
T ss_pred CCCEEEEEcCCCeEEEEEEH
Confidence 44567999999999999874
No 405
>2e5q_A PHD finger protein 19; tudor domain, isoform B, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.27 E-value=1.6e+02 Score=21.10 Aligned_cols=36 Identities=14% Similarity=0.196 Sum_probs=31.2
Q ss_pred CCCcEEEEeCCCcEEEEEEEEEcCCCCEEEEEEcCC
Q 013014 174 GASDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDAP 209 (451)
Q Consensus 174 ~~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~~ 209 (451)
...++..+..||.-|.+++..++....-+++++++.
T Consensus 10 eGqdVLarWsDGlfYlgtV~kV~~~~~~ClV~FeD~ 45 (63)
T 2e5q_A 10 EGQYVLCRWTDGLYYLGKIKRVSSSKQSCLVTFEDN 45 (63)
T ss_dssp TTCEEEEECTTSCEEEEEECCCCSTTSEEEEEETTS
T ss_pred cCCEEEEEecCCCEEEEEEEEEecCCCEEEEEEccC
Confidence 345678888999999999999999999999999864
No 406
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=20.74 E-value=46 Score=26.29 Aligned_cols=20 Identities=30% Similarity=0.434 Sum_probs=15.9
Q ss_pred CCCCCceeCCCceEEEEEee
Q 013014 277 GNSGGPLLDSSGSLIGINTA 296 (451)
Q Consensus 277 G~SGGPlvd~~G~VVGI~s~ 296 (451)
+.+.-|++|.+|+++|+++.
T Consensus 97 ~~~~l~Vvd~~g~~~Giit~ 116 (133)
T 2ef7_A 97 NIRHLPVVDDKGNLKGIISI 116 (133)
T ss_dssp TCSEEEEECTTSCEEEEEEH
T ss_pred CCCEEEEECCCCeEEEEEEH
Confidence 34456899989999999875
No 407
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=20.67 E-value=47 Score=27.24 Aligned_cols=14 Identities=43% Similarity=0.771 Sum_probs=0.0
Q ss_pred ceeCCCceEEEEEe
Q 013014 282 PLLDSSGSLIGINT 295 (451)
Q Consensus 282 Plvd~~G~VVGI~s 295 (451)
||+|.+|+++||++
T Consensus 119 pVvd~~g~~~Giit 132 (156)
T 3ctu_A 119 PVVDAEGIFQGIIT 132 (156)
T ss_dssp EEECTTSBEEEEEE
T ss_pred EEEcCCCeEEEEEE
No 408
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=20.63 E-value=47 Score=26.75 Aligned_cols=20 Identities=40% Similarity=0.567 Sum_probs=16.4
Q ss_pred CCCCCceeCCCceEEEEEee
Q 013014 277 GNSGGPLLDSSGSLIGINTA 296 (451)
Q Consensus 277 G~SGGPlvd~~G~VVGI~s~ 296 (451)
+.+--||+|.+|+++||++.
T Consensus 115 ~~~~l~Vvd~~g~~~Giit~ 134 (152)
T 4gqw_A 115 KYRRLPVVDSDGKLVGIITR 134 (152)
T ss_dssp SCCEEEEECTTSBEEEEEEH
T ss_pred CCCEEEEECCCCcEEEEEEH
Confidence 44567899999999999875
No 409
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=20.52 E-value=47 Score=23.94 Aligned_cols=20 Identities=10% Similarity=0.348 Sum_probs=14.7
Q ss_pred CCCCCCceeCCCceEEEEEee
Q 013014 276 PGNSGGPLLDSSGSLIGINTA 296 (451)
Q Consensus 276 ~G~SGGPlvd~~G~VVGI~s~ 296 (451)
.+.++-|++| +|+++||++-
T Consensus 21 ~~i~~~~V~d-~~~lvGIvT~ 40 (70)
T 3ghd_A 21 NKAGSAVVME-GDEILGVVTE 40 (70)
T ss_dssp TTCSEEEEEE-TTEEEEEEEH
T ss_pred cCCCEEEEEE-CCEEEEEEEH
Confidence 3455667775 7899999984
No 410
>2y9a_D Small nuclear ribonucleoprotein SM D3; splicing-RNA complex, PRE-mRNA splicing, spliceosome, snRNP biogenesis, SM site, SM fold, heteromeric heptameric ring; 3.60A {Homo sapiens} PDB: 2y9b_D 2y9c_D 2y9d_D 3pgw_Z* 3cw1_D
Probab=20.03 E-value=1.9e+02 Score=23.59 Aligned_cols=33 Identities=9% Similarity=0.203 Sum_probs=29.6
Q ss_pred CcEEEEeCCCcEEEEEEEEEcCCCCEEEEEEcC
Q 013014 176 SDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDA 208 (451)
Q Consensus 176 ~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~ 208 (451)
..+.|.+.+|..|.+++..+|...++.|=.+..
T Consensus 16 k~V~VeLknG~~~~G~L~~~D~~MNi~L~dv~e 48 (126)
T 2y9a_D 16 HIVTCETNTGEVYRGKLIEAEDNMNCQMSNITV 48 (126)
T ss_dssp CEEEEEESSCCEEEEEEEEECTTSCEEEEEEEE
T ss_pred CEEEEEECCCcEEEEEEEEEcCceEEEEeeEEE
Confidence 468899999999999999999999999988764
Done!