BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013016
(451 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 105/355 (29%), Positives = 167/355 (47%), Gaps = 69/355 (19%)
Query: 66 IRSATF-GRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXX-XX 123
+R+A G + +F+L + +G G G V+L R+ GH+ LYAM
Sbjct: 39 LRTANLTGHAEKVGIENFELLKVLGTGAYGKVFLV------RKISGHDTGKLYAMKVLKK 92
Query: 124 XXXXXXXXXXHRAEMEKKILKMLDH-PFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHK 182
E+++L+ + PFL TL+ F+ +++++ +GG+L + H
Sbjct: 93 ATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFT--HL 150
Query: 183 QPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSN 242
+RF+ + Y E+++ALE+LH LGIIYRD+K EN+L+ S+GH++L+DF LS
Sbjct: 151 SQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLS---- 206
Query: 243 AIXXXXXXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAAR 302
+ FVA+ R
Sbjct: 207 -------------------------------------------------KEFVADE-TER 216
Query: 303 SCSFVGTHEYVSPEVASGG--SHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK 360
+ F GT EY++P++ GG H AVDWW+ G+ +YE++ G +PF + + I +
Sbjct: 217 AYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISR 276
Query: 361 KPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLG-SKRGAADVKTHPFFKGLNF 414
+ L P MS A+DLI LL KDP RLG R A ++K H FF+ +N+
Sbjct: 277 RILKSEPPYPQEMSAL-AKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKINW 330
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 152 bits (384), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 109/364 (29%), Positives = 167/364 (45%), Gaps = 77/364 (21%)
Query: 75 TGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXH 134
+ L +DFDL R IG G V L L R +YAM
Sbjct: 15 SSLGLQDFDLLRVIGRGSYAKVLLVRLKKTDR---------IYAMKVVKKELVNDDEDID 65
Query: 135 RAEMEKKILKML-DHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSA 193
+ EK + + +HPFL L++ F+ + V+E+ +GGDL + H Q ++ A
Sbjct: 66 WVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQRQRKLPEEHA 123
Query: 194 RFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXX 253
RFY+AE+ +AL YLH GIIYRDLK +NVL+ S+GHI L+D+ +C +
Sbjct: 124 RFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDY--GMCKEGL--------- 172
Query: 254 XXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYV 313
R + F G TPN Y+
Sbjct: 173 -----------------RPGDTTSXFCG-------TPN--------------------YI 188
Query: 314 SPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPF-----AAPSNETTLRNIVKKPLTFPTQ 368
+PE+ G +G +VDWWA G+ ++EM+ GR+PF + ++ T + + L +
Sbjct: 189 APEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR 248
Query: 369 SPSSMSEYHARDLISGLLNKDPCNRLGS--KRGAADVKTHPFFKGLNFALI--RSLTPPE 424
P SMS A ++ LNKDP RLG + G AD++ HPFF+ +++ ++ + + PP
Sbjct: 249 IPRSMS-VKAASVLKSFLNKDPKERLGCLPQTGFADIQGHPFFRNVDWDMMEQKQVVPPF 307
Query: 425 IPGM 428
P +
Sbjct: 308 KPNI 311
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 108/364 (29%), Positives = 167/364 (45%), Gaps = 77/364 (21%)
Query: 75 TGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXH 134
+ L +DFDL R IG G V L L R +YAM
Sbjct: 47 SSLGLQDFDLLRVIGRGSYAKVLLVRLKKTDR---------IYAMRVVKKELVNDDEDID 97
Query: 135 RAEMEKKILKML-DHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSA 193
+ EK + + +HPFL L++ F+ + V+E+ +GGDL + H Q ++ A
Sbjct: 98 WVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQRQRKLPEEHA 155
Query: 194 RFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXX 253
RFY+AE+ +AL YLH GIIYRDLK +NVL+ S+GHI L+D+ +C +
Sbjct: 156 RFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDY--GMCKEGL--------- 204
Query: 254 XXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYV 313
R + F G TPN Y+
Sbjct: 205 -----------------RPGDTTSTFCG-------TPN--------------------YI 220
Query: 314 SPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPF-----AAPSNETTLRNIVKKPLTFPTQ 368
+PE+ G +G +VDWWA G+ ++EM+ GR+PF + ++ T + + L +
Sbjct: 221 APEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR 280
Query: 369 SPSSMSEYHARDLISGLLNKDPCNRLGS--KRGAADVKTHPFFKGLNFALI--RSLTPPE 424
P S+S A ++ LNKDP RLG + G AD++ HPFF+ +++ ++ + + PP
Sbjct: 281 IPRSLS-VKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMMEQKQVVPPF 339
Query: 425 IPGM 428
P +
Sbjct: 340 KPNI 343
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/362 (29%), Positives = 166/362 (45%), Gaps = 77/362 (21%)
Query: 77 LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRA 136
L +DFDL R IG G V L L R +YAM
Sbjct: 2 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDR---------IYAMKVVKKELVNDDEDIDWV 52
Query: 137 EMEKKILKML-DHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARF 195
+ EK + + +HPFL L++ F+ + V+E+ +GGDL + H Q ++ ARF
Sbjct: 53 QTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQRQRKLPEEHARF 110
Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXX 255
Y+AE+ +AL YLH GIIYRDLK +NVL+ S+GHI L+D+ +C +
Sbjct: 111 YSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDY--GMCKEGL----------- 157
Query: 256 XXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP 315
R + F G TPN Y++P
Sbjct: 158 ---------------RPGDTTSXFCG-------TPN--------------------YIAP 175
Query: 316 EVASGGSHGNAVDWWAFGIFIYEMIYGRTPF-----AAPSNETTLRNIVKKPLTFPTQSP 370
E+ G +G +VDWWA G+ ++EM+ GR+PF + ++ T + + L + P
Sbjct: 176 EILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIP 235
Query: 371 SSMSEYHARDLISGLLNKDPCNRLGS--KRGAADVKTHPFFKGLNFALI--RSLTPPEIP 426
S+S A ++ LNKDP RLG + G AD++ HPFF+ +++ ++ + + PP P
Sbjct: 236 RSLS-VKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMMEQKQVVPPFKP 294
Query: 427 GM 428
+
Sbjct: 295 NI 296
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 109/367 (29%), Positives = 167/367 (45%), Gaps = 77/367 (20%)
Query: 72 GRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXX 131
G L +DFDL R IG G V L L R +YAM
Sbjct: 1 GAMDPLGLQDFDLLRVIGRGSYAKVLLVRLKKTDR---------IYAMKVVKKELVNDDE 51
Query: 132 XXHRAEMEKKILKML-DHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSL 190
+ EK + + +HPFL L++ F+ + V+E+ +GGDL + H Q ++
Sbjct: 52 DIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQRQRKLPE 109
Query: 191 TSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXX 250
ARFY+AE+ +AL YLH GIIYRDLK +NVL+ S+GHI L+D+ +C +
Sbjct: 110 EHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDY--GMCKEGL------ 161
Query: 251 XXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTH 310
R + F G TPN
Sbjct: 162 --------------------RPGDTTSXFCG-------TPN------------------- 175
Query: 311 EYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPF-----AAPSNETTLRNIVKKPLTF 365
Y++PE+ G +G +VDWWA G+ ++EM+ GR+PF + ++ T + + L
Sbjct: 176 -YIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK 234
Query: 366 PTQSPSSMSEYHARDLISGLLNKDPCNRLGS--KRGAADVKTHPFFKGLNFALI--RSLT 421
+ P S+S A ++ LNKDP RLG + G AD++ HPFF+ +++ ++ + +
Sbjct: 235 QIRIPRSLS-VKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMMEQKQVV 293
Query: 422 PPEIPGM 428
PP P +
Sbjct: 294 PPFKPNI 300
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/351 (30%), Positives = 153/351 (43%), Gaps = 74/351 (21%)
Query: 81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEK 140
DF + IG G G V L R YA+ E+
Sbjct: 39 DFHFLKVIGKGSFGKVLLA---------RHKAEEVFYAVKVLQKKAILKKKEEKHIMSER 89
Query: 141 KIL-KMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAE 199
+L K + HPFL L+ F+ ++ V+++ +GG+L H Q + F ARFYAAE
Sbjct: 90 NVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGEL--FYHLQRERCFLEPRARFYAAE 147
Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXX 259
+ AL YLH L I+YRDLKPEN+L+ S GHI+L+DF LC I
Sbjct: 148 IASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDF--GLCKENI--------------- 190
Query: 260 RSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS 319
++++ S F GT EY++PEV
Sbjct: 191 -------EHNSTTSTF-------------------------------CGTPEYLAPEVLH 212
Query: 320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHAR 379
+ VDWW G +YEM+YG PF + + NI+ KPL +S AR
Sbjct: 213 KQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPNITNS-----AR 267
Query: 380 DLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNF--ALIRSLTPPEIPGM 428
L+ GLL KD RLG+K ++K+H FF +N+ + + +TPP P +
Sbjct: 268 HLLEGLLQKDRTKRLGAKDDFMEIKSHVFFSLINWDDLINKKITPPFNPNV 318
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 149 bits (375), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 96/359 (26%), Positives = 160/359 (44%), Gaps = 77/359 (21%)
Query: 74 KTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXX 133
+ L DF+LH+ +G G G V+L + +A+
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQ---------FFAIKALKKDVVLMDDDV 62
Query: 134 HRAEMEKKILKM-LDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTS 192
+EK++L + +HPFL ++ F+ VME+ +GGDL + H Q +F L+
Sbjct: 63 ECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDL--MYHIQSCHKFDLSR 120
Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXX 252
A FYAAE+++ L++LH GI+YRDLK +N+L+ DGHI ++DF +C +
Sbjct: 121 ATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADF--GMCKENMLGDAKT-- 176
Query: 253 XXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEY 312
N F G TP+ Y
Sbjct: 177 ------------------------NEFCG-------TPD--------------------Y 185
Query: 313 VSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSS 372
++PE+ G + ++VDWW+FG+ +YEM+ G++PF E +I +P
Sbjct: 186 IAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYP-----R 240
Query: 373 MSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALI--RSLTPPEIPGMR 429
E A+DL+ L ++P RLG + D++ HP F+ +N+ + + + PP P ++
Sbjct: 241 WLEKEAKDLLVKLFVREPEKRLGVR---GDIRQHPLFREINWEELERKEIDPPFRPKVK 296
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 138 bits (347), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 102/348 (29%), Positives = 147/348 (42%), Gaps = 71/348 (20%)
Query: 80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEME 139
DF + +G G TV L R+ YA+ E
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSRE---------YAIKILEKRHIIKENKVPYVTRE 79
Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAE 199
+ ++ LDHPF LY F+ + + G+L L++ + F T RFY AE
Sbjct: 80 RDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAE 137
Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXX 259
++ ALEYLH GII+RDLKPEN+L+ D HI ++D
Sbjct: 138 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITD------------------------- 172
Query: 260 RSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS 319
FG+ K+ L+P E AR+ SFVGT +YVSPE+ +
Sbjct: 173 --------------------FGTAKV--LSP------ESKQARANSFVGTAQYVSPELLT 204
Query: 320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHAR 379
S + D WA G IY+++ G PF A + + I+K FP + AR
Sbjct: 205 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK-----AR 259
Query: 380 DLISGLLNKDPCNRLGSK--RGAADVKTHPFFKGLNFALIRSLTPPEI 425
DL+ LL D RLG + G +K HPFF+ + + + TPP++
Sbjct: 260 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 307
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 137 bits (346), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 102/348 (29%), Positives = 147/348 (42%), Gaps = 71/348 (20%)
Query: 80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEME 139
DF + +G G TV L R+ YA+ E
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSRE---------YAIKILEKRHIIKENKVPYVTRE 83
Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAE 199
+ ++ LDHPF LY F+ + + G+L L++ + F T RFY AE
Sbjct: 84 RDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAE 141
Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXX 259
++ ALEYLH GII+RDLKPEN+L+ D HI ++D
Sbjct: 142 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITD------------------------- 176
Query: 260 RSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS 319
FG+ K+ L+P E AR+ SFVGT +YVSPE+ +
Sbjct: 177 --------------------FGTAKV--LSP------ESKQARANSFVGTAQYVSPELLT 208
Query: 320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHAR 379
S + D WA G IY+++ G PF A + + I+K FP + AR
Sbjct: 209 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK-----AR 263
Query: 380 DLISGLLNKDPCNRLGSK--RGAADVKTHPFFKGLNFALIRSLTPPEI 425
DL+ LL D RLG + G +K HPFF+ + + + TPP++
Sbjct: 264 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 311
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 100/354 (28%), Positives = 161/354 (45%), Gaps = 75/354 (21%)
Query: 77 LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRA 136
+ DF+ +G G G V L +G E LYA+
Sbjct: 16 VKLTDFNFLMVLGKGSFGKVMLADR-------KGTEE--LYAIKILKKDVVIQDDDVECT 66
Query: 137 EMEKKILKMLDHP-FLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARF 195
+EK++L +LD P FL L++ F+ + VME+ +GGDL + H Q +F A F
Sbjct: 67 MVEKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDL--MYHIQQVGKFKEPQAVF 124
Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXX 255
YAAE+ + L +LH GIIYRDLK +NV++ S+GHI ++DF +C +
Sbjct: 125 YAAEISIGLFFLHKRGIIYRDLKLDNVMLDSEGHIKIADF--GMCKEHMM---------- 172
Query: 256 XXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP 315
TR++ TP+ Y++P
Sbjct: 173 -----DGVTTREFCG------------------TPD--------------------YIAP 189
Query: 316 EVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSE 375
E+ + +G +VDWWA+G+ +YEM+ G+ PF + ++I++ +++ P S+S+
Sbjct: 190 EIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSY----PKSLSK 245
Query: 376 YHARDLISGLLNKDPCNRLG-SKRGAADVKTHPFFKGLNFALI--RSLTPPEIP 426
A + GL+ K P RLG G DV+ H FF+ +++ + R + PP P
Sbjct: 246 -EAVSICKGLMTKHPAKRLGCGPEGERDVREHAFFRRIDWEKLENREIQPPFKP 298
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/347 (29%), Positives = 146/347 (42%), Gaps = 71/347 (20%)
Query: 81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEK 140
DF + +G G TV L R+ YA+ E+
Sbjct: 8 DFKFGKILGEGSFSTVVLARELATSRE---------YAIKILEKRHIIKENKVPYVTRER 58
Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
++ LDHPF LY F+ + + G+L L++ + F T RFY AE+
Sbjct: 59 DVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEI 116
Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXR 260
+ ALEYLH GII+RDLKPEN+L+ D HI ++D
Sbjct: 117 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITD-------------------------- 150
Query: 261 SQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG 320
FG+ K+ L+P E AR+ FVGT +YVSPE+ +
Sbjct: 151 -------------------FGTAKV--LSP------ESKQARANXFVGTAQYVSPELLTE 183
Query: 321 GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARD 380
S + D WA G IY+++ G PF A + + I+K FP + ARD
Sbjct: 184 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK-----ARD 238
Query: 381 LISGLLNKDPCNRLGSK--RGAADVKTHPFFKGLNFALIRSLTPPEI 425
L+ LL D RLG + G +K HPFF+ + + + TPP++
Sbjct: 239 LVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 285
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/347 (29%), Positives = 146/347 (42%), Gaps = 71/347 (20%)
Query: 81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEK 140
DF + +G G TV L R+ YA+ E+
Sbjct: 9 DFKFGKILGEGSFSTVVLARELATSRE---------YAIKILEKRHIIKENKVPYVTRER 59
Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
++ LDHPF LY F+ + + G+L L++ + F T RFY AE+
Sbjct: 60 DVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEI 117
Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXR 260
+ ALEYLH GII+RDLKPEN+L+ D HI ++D
Sbjct: 118 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITD-------------------------- 151
Query: 261 SQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG 320
FG+ K+ L+P E AR+ FVGT +YVSPE+ +
Sbjct: 152 -------------------FGTAKV--LSP------ESKQARANXFVGTAQYVSPELLTE 184
Query: 321 GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARD 380
S + D WA G IY+++ G PF A + + I+K FP + ARD
Sbjct: 185 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK-----ARD 239
Query: 381 LISGLLNKDPCNRLGSK--RGAADVKTHPFFKGLNFALIRSLTPPEI 425
L+ LL D RLG + G +K HPFF+ + + + TPP++
Sbjct: 240 LVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 286
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/348 (29%), Positives = 147/348 (42%), Gaps = 71/348 (20%)
Query: 80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEME 139
DF + +G G TV L R+ YA+ E
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSRE---------YAIKILEKRHIIKENKVPYVTRE 80
Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAE 199
+ ++ LDHPF LY F+ + + G+L L++ + F T RFY AE
Sbjct: 81 RDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAE 138
Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXX 259
++ ALEYLH GII+RDLKPEN+L+ D HI ++D
Sbjct: 139 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITD------------------------- 173
Query: 260 RSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS 319
FG+ K+ L+P E AR+ +FVGT +YVSPE+ +
Sbjct: 174 --------------------FGTAKV--LSP------ESKQARANAFVGTAQYVSPELLT 205
Query: 320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHAR 379
S + D WA G IY+++ G PF A + + I+K FP + AR
Sbjct: 206 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK-----AR 260
Query: 380 DLISGLLNKDPCNRLGSK--RGAADVKTHPFFKGLNFALIRSLTPPEI 425
DL+ LL D RLG + G +K HPFF+ + + + TPP++
Sbjct: 261 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 308
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/348 (29%), Positives = 146/348 (41%), Gaps = 71/348 (20%)
Query: 80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEME 139
DF + +G G TV L R+ YA+ E
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSRE---------YAIKILEKRHIIKENKVPYVTRE 64
Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAE 199
+ ++ LDHPF LY F+ + + G+L L++ + F T RFY AE
Sbjct: 65 RDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAE 122
Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXX 259
++ ALEYLH GII+RDLKPEN+L+ D HI ++D
Sbjct: 123 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITD------------------------- 157
Query: 260 RSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS 319
FG+ K+ L+P E AR+ FVGT +YVSPE+ +
Sbjct: 158 --------------------FGTAKV--LSP------ESKQARANXFVGTAQYVSPELLT 189
Query: 320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHAR 379
S + D WA G IY+++ G PF A + + I+K FP + AR
Sbjct: 190 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK-----AR 244
Query: 380 DLISGLLNKDPCNRLGSK--RGAADVKTHPFFKGLNFALIRSLTPPEI 425
DL+ LL D RLG + G +K HPFF+ + + + TPP++
Sbjct: 245 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 292
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/348 (29%), Positives = 146/348 (41%), Gaps = 71/348 (20%)
Query: 80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEME 139
DF + +G G TV L R+ YA+ E
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSRE---------YAIKILEKRHIIKENKVPYVTRE 79
Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAE 199
+ ++ LDHPF LY F+ + + G+L L++ + F T RFY AE
Sbjct: 80 RDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAE 137
Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXX 259
++ ALEYLH GII+RDLKPEN+L+ D HI ++D
Sbjct: 138 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITD------------------------- 172
Query: 260 RSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS 319
FG+ K+ L+P E AR+ FVGT +YVSPE+ +
Sbjct: 173 --------------------FGTAKV--LSP------ESKQARANXFVGTAQYVSPELLT 204
Query: 320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHAR 379
S + D WA G IY+++ G PF A + + I+K FP + AR
Sbjct: 205 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK-----AR 259
Query: 380 DLISGLLNKDPCNRLGSK--RGAADVKTHPFFKGLNFALIRSLTPPEI 425
DL+ LL D RLG + G +K HPFF+ + + + TPP++
Sbjct: 260 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 307
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/347 (29%), Positives = 146/347 (42%), Gaps = 71/347 (20%)
Query: 81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEK 140
DF + +G G TV L R+ YA+ E+
Sbjct: 11 DFKFGKILGEGSFSTVVLARELATSRE---------YAIKILEKRHIIKENKVPYVTRER 61
Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
++ LDHPF LY F+ + + G+L L++ + F T RFY AE+
Sbjct: 62 DVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEI 119
Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXR 260
+ ALEYLH GII+RDLKPEN+L+ D HI ++D
Sbjct: 120 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITD-------------------------- 153
Query: 261 SQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG 320
FG+ K+ L+P E AR+ FVGT +YVSPE+ +
Sbjct: 154 -------------------FGTAKV--LSP------ESKQARANXFVGTAQYVSPELLTE 186
Query: 321 GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARD 380
S + D WA G IY+++ G PF A + + I+K FP + ARD
Sbjct: 187 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK-----ARD 241
Query: 381 LISGLLNKDPCNRLGSK--RGAADVKTHPFFKGLNFALIRSLTPPEI 425
L+ LL D RLG + G +K HPFF+ + + + TPP++
Sbjct: 242 LVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 288
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 101/348 (29%), Positives = 146/348 (41%), Gaps = 71/348 (20%)
Query: 80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEME 139
DF + +G G TV L R+ YA+ E
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSRE---------YAIKILEKRHIIKENKVPYVTRE 80
Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAE 199
+ ++ LDHPF LY F+ + + G+L L++ + F T RFY AE
Sbjct: 81 RDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAE 138
Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXX 259
++ ALEYLH GII+RDLKPEN+L+ D HI ++D
Sbjct: 139 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITD------------------------- 173
Query: 260 RSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS 319
FG+ K+ L+P E AR+ FVGT +YVSPE+ +
Sbjct: 174 --------------------FGTAKV--LSP------ESKQARANXFVGTAQYVSPELLT 205
Query: 320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHAR 379
S + D WA G IY+++ G PF A + + I+K FP + AR
Sbjct: 206 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK-----AR 260
Query: 380 DLISGLLNKDPCNRLGSK--RGAADVKTHPFFKGLNFALIRSLTPPEI 425
DL+ LL D RLG + G +K HPFF+ + + + TPP++
Sbjct: 261 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 308
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 102/348 (29%), Positives = 146/348 (41%), Gaps = 71/348 (20%)
Query: 80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEME 139
DF + +G G TV L R+ YA+ E
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSRE---------YAIKILEKRHIIKENKVPYVTRE 82
Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAE 199
+ ++ LDHPF LY F+ + + G L L++ + F T RFY AE
Sbjct: 83 RDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGCL--LKYIRKIGSFDETCTRFYTAE 140
Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXX 259
++ ALEYLH GII+RDLKPEN+L+ D HI ++DF
Sbjct: 141 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDF------------------------ 176
Query: 260 RSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS 319
G+ K+ L+P E AR+ SFVGT +YVSPE+ +
Sbjct: 177 ---------------------GTAKV--LSP------ESKQARANSFVGTAQYVSPELLT 207
Query: 320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHAR 379
S + D WA G IY+++ G PF A + + I+K FP + AR
Sbjct: 208 EKSASKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK-----AR 262
Query: 380 DLISGLLNKDPCNRLGSK--RGAADVKTHPFFKGLNFALIRSLTPPEI 425
DL+ LL D RLG + G +K HPFF+ + + + TPP++
Sbjct: 263 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 310
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 101/348 (29%), Positives = 146/348 (41%), Gaps = 71/348 (20%)
Query: 80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEME 139
DF + +G G TV L R+ YA+ E
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSRE---------YAIKILEKRHIIKENKVPYVTRE 82
Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAE 199
+ ++ LDHPF LY F+ + + G+L L++ + F T RFY AE
Sbjct: 83 RDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAE 140
Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXX 259
++ ALEYLH GII+RDLKPEN+L+ D HI ++D
Sbjct: 141 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITD------------------------- 175
Query: 260 RSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS 319
FG+ K+ L+P E AR+ FVGT +YVSPE+ +
Sbjct: 176 --------------------FGTAKV--LSP------ESKQARANXFVGTAQYVSPELLT 207
Query: 320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHAR 379
S + D WA G IY+++ G PF A + + I+K FP + AR
Sbjct: 208 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK-----AR 262
Query: 380 DLISGLLNKDPCNRLGSK--RGAADVKTHPFFKGLNFALIRSLTPPEI 425
DL+ LL D RLG + G +K HPFF+ + + + TPP++
Sbjct: 263 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 310
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 160/354 (45%), Gaps = 75/354 (21%)
Query: 80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEME 139
DF++ + IG G G V + L N + ++AM E
Sbjct: 74 EDFEILKVIGRGAFGEVAVVKLKNADK---------VFAMKILNKWEMLKRAETACFREE 124
Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAE 199
+ +L D ++ TL+ F+ N +VM++ GGDL +L K R ARFY AE
Sbjct: 125 RDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKF-EDRLPEEMARFYLAE 183
Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXX 259
+++A++ +H L ++RD+KP+N+L+ +GHI L+D
Sbjct: 184 MVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLAD------------------------- 218
Query: 260 RSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS 319
FGS L + E +S VGT +Y+SPE+
Sbjct: 219 --------------------FGSC---------LKLMEDGTVQSSVAVGTPDYISPEILQ 249
Query: 320 G-----GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIV--KKPLTFPTQSPSS 372
G +G DWW+ G+ +YEM+YG TPF A S T I+ K+ FPTQ +
Sbjct: 250 AMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQV-TD 308
Query: 373 MSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEIP 426
+SE +A+DLI L+ +RLG + G D K HPFF G+++ IR+ P IP
Sbjct: 309 VSE-NAKDLIRRLICSRE-HRLG-QNGIEDFKKHPFFSGIDWDNIRNCEAPYIP 359
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 101/348 (29%), Positives = 146/348 (41%), Gaps = 71/348 (20%)
Query: 80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEME 139
DF + +G G TV L R+ YA+ E
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSRE---------YAIKILEKRHIIKENKVPYVTRE 80
Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAE 199
+ ++ LDHPF LY F+ + + G+L L++ + F T RFY AE
Sbjct: 81 RDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAE 138
Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXX 259
++ ALEYLH GII+RDLKPEN+L+ D HI ++D
Sbjct: 139 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITD------------------------- 173
Query: 260 RSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS 319
FG+ K+ L+P E AR+ FVGT +YVSPE+ +
Sbjct: 174 --------------------FGTAKV--LSP------ESKQARANXFVGTAQYVSPELLT 205
Query: 320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHAR 379
S + D WA G IY+++ G PF A + + I+K FP + AR
Sbjct: 206 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK-----AR 260
Query: 380 DLISGLLNKDPCNRLGSK--RGAADVKTHPFFKGLNFALIRSLTPPEI 425
DL+ LL D RLG + G +K HPFF+ + + + TPP++
Sbjct: 261 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 308
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 101/348 (29%), Positives = 146/348 (41%), Gaps = 71/348 (20%)
Query: 80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEME 139
DF + +G G TV L R+ YA+ E
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSRE---------YAIKILEKRHIIKENKVPYVTRE 82
Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAE 199
+ ++ LDHPF LY F+ + + G+L L++ + F T RFY AE
Sbjct: 83 RDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAE 140
Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXX 259
++ ALEYLH GII+RDLKPEN+L+ D HI ++D
Sbjct: 141 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITD------------------------- 175
Query: 260 RSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS 319
FG+ K+ L+P E AR+ FVGT +YVSPE+ +
Sbjct: 176 --------------------FGTAKV--LSP------ESKQARANXFVGTAQYVSPELLT 207
Query: 320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHAR 379
S + D WA G IY+++ G PF A + + I+K FP + AR
Sbjct: 208 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK-----AR 262
Query: 380 DLISGLLNKDPCNRLGSK--RGAADVKTHPFFKGLNFALIRSLTPPEI 425
DL+ LL D RLG + G +K HPFF+ + + + TPP++
Sbjct: 263 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 310
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 101/348 (29%), Positives = 146/348 (41%), Gaps = 71/348 (20%)
Query: 80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEME 139
DF + +G G TV L R+ YA+ E
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSRE---------YAIKILEKRHIIKENKVPYVTRE 82
Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAE 199
+ ++ LDHPF LY F+ + + G+L L++ + F T RFY AE
Sbjct: 83 RDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAE 140
Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXX 259
++ ALEYLH GII+RDLKPEN+L+ D HI ++D
Sbjct: 141 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITD------------------------- 175
Query: 260 RSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS 319
FG+ K+ L+P E AR+ FVGT +YVSPE+ +
Sbjct: 176 --------------------FGTAKV--LSP------ESKQARANXFVGTAQYVSPELLT 207
Query: 320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHAR 379
S + D WA G IY+++ G PF A + + I+K FP + AR
Sbjct: 208 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK-----AR 262
Query: 380 DLISGLLNKDPCNRLGSK--RGAADVKTHPFFKGLNFALIRSLTPPEI 425
DL+ LL D RLG + G +K HPFF+ + + + TPP++
Sbjct: 263 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 310
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 101/348 (29%), Positives = 146/348 (41%), Gaps = 71/348 (20%)
Query: 80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEME 139
DF + +G G TV L R+ YA+ E
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSRE---------YAIKILEKRHIIKENKVPYVTRE 83
Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAE 199
+ ++ LDHPF LY F+ + + G+L L++ + F T RFY AE
Sbjct: 84 RDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAE 141
Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXX 259
++ ALEYLH GII+RDLKPEN+L+ D HI ++D
Sbjct: 142 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITD------------------------- 176
Query: 260 RSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS 319
FG+ K+ L+P E AR+ FVGT +YVSPE+ +
Sbjct: 177 --------------------FGTAKV--LSP------ESKQARANXFVGTAQYVSPELLT 208
Query: 320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHAR 379
S + D WA G IY+++ G PF A + + I+K FP + AR
Sbjct: 209 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK-----AR 263
Query: 380 DLISGLLNKDPCNRLGSK--RGAADVKTHPFFKGLNFALIRSLTPPEI 425
DL+ LL D RLG + G +K HPFF+ + + + TPP++
Sbjct: 264 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 311
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 101/346 (29%), Positives = 145/346 (41%), Gaps = 71/346 (20%)
Query: 81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEK 140
DF + +G G TV L R+ YA+ E+
Sbjct: 10 DFKFGKILGEGSFSTVVLARELATSRE---------YAIKILEKRHIIKENKVPYVTRER 60
Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
++ LDHPF LY F+ + + G+L L++ + F T RFY AE+
Sbjct: 61 DVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEI 118
Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXR 260
+ ALEYLH GII+RDLKPEN+L+ D HI ++D
Sbjct: 119 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITD-------------------------- 152
Query: 261 SQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG 320
FG+ K+ L+P E AR+ FVGT +YVSPE+ +
Sbjct: 153 -------------------FGTAKV--LSP------ESKQARANXFVGTAQYVSPELLTE 185
Query: 321 GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARD 380
S + D WA G IY+++ G PF A + + I+K FP + ARD
Sbjct: 186 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK-----ARD 240
Query: 381 LISGLLNKDPCNRLGSK--RGAADVKTHPFFKGLNFALIRSLTPPE 424
L+ LL D RLG + G +K HPFF+ + + + TPP+
Sbjct: 241 LVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPK 286
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 135 bits (340), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 101/348 (29%), Positives = 145/348 (41%), Gaps = 71/348 (20%)
Query: 80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEME 139
DF + +G G TV L R+ YA+ E
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSRE---------YAIKILEKRHIIKENKVPYVTRE 85
Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAE 199
+ ++ LDHPF LY F+ + + G+L L++ + F T RFY AE
Sbjct: 86 RDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAE 143
Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXX 259
++ ALEYLH GII+RDLKPEN+L+ D HI ++D
Sbjct: 144 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITD------------------------- 178
Query: 260 RSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS 319
FG+ K+ L+P E AR+ FVGT +YVSPE+ +
Sbjct: 179 --------------------FGTAKV--LSP------ESKQARANXFVGTAQYVSPELLT 210
Query: 320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHAR 379
S + D WA G IY+++ G PF A + + I+K FP AR
Sbjct: 211 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPAAFFPK-----AR 265
Query: 380 DLISGLLNKDPCNRLGSK--RGAADVKTHPFFKGLNFALIRSLTPPEI 425
DL+ LL D RLG + G +K HPFF+ + + + TPP++
Sbjct: 266 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 313
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 101/348 (29%), Positives = 145/348 (41%), Gaps = 71/348 (20%)
Query: 80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEME 139
DF + +G G TV L R+ YA+ E
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSRE---------YAIKILEKRHIIKENKVPYVTRE 82
Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAE 199
+ ++ LDHPF LY F+ + + G+L L++ + F T RFY AE
Sbjct: 83 RDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAE 140
Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXX 259
++ ALEYLH GII+RDLKPEN+L+ D HI ++D
Sbjct: 141 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITD------------------------- 175
Query: 260 RSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS 319
FG+ K+ L+P E AR+ FVGT +YVSPE+ +
Sbjct: 176 --------------------FGTAKV--LSP------ESKQARANXFVGTAQYVSPELLT 207
Query: 320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHAR 379
S + D WA G IY+++ G PF A + I+K FP + AR
Sbjct: 208 EKSAXKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPK-----AR 262
Query: 380 DLISGLLNKDPCNRLGSK--RGAADVKTHPFFKGLNFALIRSLTPPEI 425
DL+ LL D RLG + G +K HPFF+ + + + TPP++
Sbjct: 263 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 310
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 135 bits (339), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 91/289 (31%), Positives = 132/289 (45%), Gaps = 62/289 (21%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E+ ++ LDHPF LY F+ + + G+L L++ + F T RFY A
Sbjct: 80 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTA 137
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
E++ ALEYLH GII+RDLKPEN+L+ D HI ++D
Sbjct: 138 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITD------------------------ 173
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
FG+ K+ L+P E AR+ FVGT +YVSPE+
Sbjct: 174 ---------------------FGTAKV--LSP------ESKQARANXFVGTAQYVSPELL 204
Query: 319 SGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHA 378
+ S + D WA G IY+++ G PF A + + I+K FP + A
Sbjct: 205 TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK-----A 259
Query: 379 RDLISGLLNKDPCNRLGSK--RGAADVKTHPFFKGLNFALIRSLTPPEI 425
RDL+ LL D RLG + G +K HPFF+ + + + TPP++
Sbjct: 260 RDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 308
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 135 bits (339), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 101/348 (29%), Positives = 146/348 (41%), Gaps = 71/348 (20%)
Query: 80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEME 139
DF + +G G TV L R+ YA+ E
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSRE---------YAIKILEKRHIIKENKVPYVTRE 87
Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAE 199
+ ++ LDHPF LY F+ + + G+L L++ + F T RFY AE
Sbjct: 88 RDVMSRLDHPFFVKLYFCFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAE 145
Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXX 259
++ ALEYLH GII+RDLKPEN+L+ D HI ++D
Sbjct: 146 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITD------------------------- 180
Query: 260 RSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS 319
FG+ K+ L+P E AR+ FVGT +YVSPE+ +
Sbjct: 181 --------------------FGTAKV--LSP------ESKQARANXFVGTAQYVSPELLT 212
Query: 320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHAR 379
S + D WA G IY+++ G PF A + + I+K FP + AR
Sbjct: 213 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK-----AR 267
Query: 380 DLISGLLNKDPCNRLGSK--RGAADVKTHPFFKGLNFALIRSLTPPEI 425
DL+ LL D RLG + G +K HPFF+ + + + TPP++
Sbjct: 268 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 315
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 135 bits (339), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 101/348 (29%), Positives = 145/348 (41%), Gaps = 71/348 (20%)
Query: 80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEME 139
DF + +G G TV L R+ YA+ E
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSRE---------YAIKILEKRHIIKENKVPYVTRE 82
Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAE 199
+ ++ LDHPF LY F+ + + G+L L++ + F T RFY AE
Sbjct: 83 RDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAE 140
Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXX 259
++ ALEYLH GII+RDLKPEN+L+ D HI ++D
Sbjct: 141 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITD------------------------- 175
Query: 260 RSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS 319
FG+ K+ L+P E AR+ FVGT +YVSPE+ +
Sbjct: 176 --------------------FGTAKV--LSP------ESKQARANXFVGTAQYVSPELLT 207
Query: 320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHAR 379
S + D WA G IY+++ G PF A + I+K FP + AR
Sbjct: 208 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPK-----AR 262
Query: 380 DLISGLLNKDPCNRLGSK--RGAADVKTHPFFKGLNFALIRSLTPPEI 425
DL+ LL D RLG + G +K HPFF+ + + + TPP++
Sbjct: 263 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 310
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 134 bits (338), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 104/361 (28%), Positives = 161/361 (44%), Gaps = 83/361 (22%)
Query: 79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEM 138
F DF R +G G G V+ C + + LYA A +
Sbjct: 187 FLDF---RVLGRGGFGEVFACQMKATGK---------LYACKKLNKKRLKKRKGYQGAMV 234
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDL--HSLRHKQPHKRFSLTSARFY 196
EKKIL + F+ +L FE C+VM +GGD+ H + + F A FY
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXX 256
A+++ LE+LH IIYRDLKPENVL+ DG++ +SD L++ A
Sbjct: 295 TAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKA------------- 341
Query: 257 XXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE 316
QT T+ Y+ GT +++PE
Sbjct: 342 ----GQTKTKGYA--------------------------------------GTPGFMAPE 359
Query: 317 VASGGSHGNAVDWWAFGIFIYEMIYGRTPFAA----PSNETTLRNIVKKPLTFPTQ-SPS 371
+ G + +VD++A G+ +YEMI R PF A N+ + ++++ +T+P + SP+
Sbjct: 360 LLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPA 419
Query: 372 SMSEYHARDLISGLLNKDPCNRLGSKRGAAD-VKTHPFFKGLNFALIRS--LTPPEIPGM 428
S +D LL KDP RLG + G+ D ++THP F+ +++ + + LTPP +P
Sbjct: 420 S------KDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLEAGMLTPPFVPDS 473
Query: 429 R 429
R
Sbjct: 474 R 474
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 134 bits (338), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 104/361 (28%), Positives = 161/361 (44%), Gaps = 83/361 (22%)
Query: 79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEM 138
F DF R +G G G V+ C + + LYA A +
Sbjct: 187 FLDF---RVLGRGGFGEVFACQMKATGK---------LYACKKLNKKRLKKRKGYQGAMV 234
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDL--HSLRHKQPHKRFSLTSARFY 196
EKKIL + F+ +L FE C+VM +GGD+ H + + F A FY
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXX 256
A+++ LE+LH IIYRDLKPENVL+ DG++ +SD L++ A
Sbjct: 295 TAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKA------------- 341
Query: 257 XXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE 316
QT T+ Y+ GT +++PE
Sbjct: 342 ----GQTKTKGYA--------------------------------------GTPGFMAPE 359
Query: 317 VASGGSHGNAVDWWAFGIFIYEMIYGRTPFAA----PSNETTLRNIVKKPLTFPTQ-SPS 371
+ G + +VD++A G+ +YEMI R PF A N+ + ++++ +T+P + SP+
Sbjct: 360 LLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPA 419
Query: 372 SMSEYHARDLISGLLNKDPCNRLGSKRGAAD-VKTHPFFKGLNFALIRS--LTPPEIPGM 428
S +D LL KDP RLG + G+ D ++THP F+ +++ + + LTPP +P
Sbjct: 420 S------KDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLEAGMLTPPFVPDS 473
Query: 429 R 429
R
Sbjct: 474 R 474
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 134 bits (338), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 104/361 (28%), Positives = 161/361 (44%), Gaps = 83/361 (22%)
Query: 79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEM 138
F DF R +G G G V+ C + + LYA A +
Sbjct: 187 FLDF---RVLGRGGFGEVFACQMKATGK---------LYACKKLNKKRLKKRKGYQGAMV 234
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDL--HSLRHKQPHKRFSLTSARFY 196
EKKIL + F+ +L FE C+VM +GGD+ H + + F A FY
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXX 256
A+++ LE+LH IIYRDLKPENVL+ DG++ +SD L++ A
Sbjct: 295 TAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKA------------- 341
Query: 257 XXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE 316
QT T+ Y+ GT +++PE
Sbjct: 342 ----GQTKTKGYA--------------------------------------GTPGFMAPE 359
Query: 317 VASGGSHGNAVDWWAFGIFIYEMIYGRTPFAA----PSNETTLRNIVKKPLTFPTQ-SPS 371
+ G + +VD++A G+ +YEMI R PF A N+ + ++++ +T+P + SP+
Sbjct: 360 LLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPA 419
Query: 372 SMSEYHARDLISGLLNKDPCNRLGSKRGAAD-VKTHPFFKGLNFALIRS--LTPPEIPGM 428
S +D LL KDP RLG + G+ D ++THP F+ +++ + + LTPP +P
Sbjct: 420 S------KDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLEAGMLTPPFVPDS 473
Query: 429 R 429
R
Sbjct: 474 R 474
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 134 bits (338), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 104/361 (28%), Positives = 161/361 (44%), Gaps = 83/361 (22%)
Query: 79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEM 138
F DF R +G G G V+ C + + LYA A +
Sbjct: 187 FLDF---RVLGRGGFGEVFACQMKATGK---------LYACKKLNKKRLKKRKGYQGAMV 234
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDL--HSLRHKQPHKRFSLTSARFY 196
EKKIL + F+ +L FE C+VM +GGD+ H + + F A FY
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXX 256
A+++ LE+LH IIYRDLKPENVL+ DG++ +SD L++ A
Sbjct: 295 TAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKA------------- 341
Query: 257 XXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE 316
QT T+ Y+ GT +++PE
Sbjct: 342 ----GQTKTKGYA--------------------------------------GTPGFMAPE 359
Query: 317 VASGGSHGNAVDWWAFGIFIYEMIYGRTPFAA----PSNETTLRNIVKKPLTFPTQ-SPS 371
+ G + +VD++A G+ +YEMI R PF A N+ + ++++ +T+P + SP+
Sbjct: 360 LLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPA 419
Query: 372 SMSEYHARDLISGLLNKDPCNRLGSKRGAAD-VKTHPFFKGLNFALIRS--LTPPEIPGM 428
S +D LL KDP RLG + G+ D ++THP F+ +++ + + LTPP +P
Sbjct: 420 S------KDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLEAGMLTPPFVPDS 473
Query: 429 R 429
R
Sbjct: 474 R 474
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 104/368 (28%), Positives = 165/368 (44%), Gaps = 72/368 (19%)
Query: 82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXX-XHRAEMEK 140
F+L R +G G G V+ + R+ G ++AM + E+
Sbjct: 19 FELLRVLGKGGYGKVF------QVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAER 72
Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
IL+ + HPF+ L F+ +++E+ SGG+L ++ F +A FY AE+
Sbjct: 73 NILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLERE--GIFMEDTACFYLAEI 130
Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXR 260
+AL +LH GIIYRDLKPEN+++ GH+ L+DF LC +I
Sbjct: 131 SMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDF--GLCKESIHDG------------- 175
Query: 261 SQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG 320
+ T+T F G+ I+ + P E+
Sbjct: 176 TVTHT-------------FCGT--IEYMAP-------------------------EILMR 195
Query: 321 GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARD 380
H AVDWW+ G +Y+M+ G PF + + T+ I+K L P P E ARD
Sbjct: 196 SGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLP---PYLTQE--ARD 250
Query: 381 LISGLLNKDPCNRLGSKRG-AADVKTHPFFKGLNFA--LIRSLTPPEIPGMRRQKTMPFP 437
L+ LL ++ +RLG+ G A +V+ HPFF+ +N+ L R + PP P ++ ++ +
Sbjct: 251 LLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHINWEELLARKVEPPFKPLLQSEEDVSQF 310
Query: 438 DQKIKSQS 445
D K Q+
Sbjct: 311 DSKFTRQT 318
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 102/368 (27%), Positives = 162/368 (44%), Gaps = 72/368 (19%)
Query: 82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXX-XHRAEMEK 140
F+L R +G G G V+ + R+ G ++AM + E+
Sbjct: 19 FELLRVLGKGGYGKVF------QVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAER 72
Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
IL+ + HPF+ L F+ +++E+ SGG+L ++ F +A FY AE+
Sbjct: 73 NILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLERE--GIFMEDTACFYLAEI 130
Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXR 260
+AL +LH GIIYRDLKPEN+++ GH+ L+DF LC +I
Sbjct: 131 SMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDF--GLCKESI---------------H 173
Query: 261 SQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG 320
T T + + ++A + RS
Sbjct: 174 DGTVTHXFCGTIE--------------------YMAPEILMRS----------------- 196
Query: 321 GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARD 380
H AVDWW+ G +Y+M+ G PF + + T+ I+K L P P E ARD
Sbjct: 197 -GHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLP---PYLTQE--ARD 250
Query: 381 LISGLLNKDPCNRLGSKRG-AADVKTHPFFKGLNFA--LIRSLTPPEIPGMRRQKTMPFP 437
L+ LL ++ +RLG+ G A +V+ HPFF+ +N+ L R + PP P ++ ++ +
Sbjct: 251 LLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHINWEELLARKVEPPFKPLLQSEEDVSQF 310
Query: 438 DQKIKSQS 445
D K Q+
Sbjct: 311 DSKFTRQT 318
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 131 bits (330), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 105/363 (28%), Positives = 158/363 (43%), Gaps = 75/363 (20%)
Query: 73 RKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXX 132
++ L DF++ + IG G G V + + N R +YAM
Sbjct: 83 KEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTER---------IYAMKILNKWEMLKRAE 133
Query: 133 XHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTS 192
E+ +L D ++ L+ F+ N +VM++ GGDL +L K K
Sbjct: 134 TACFREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDK-LPEDM 192
Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXX 252
ARFY E+++A++ +H L ++RD+KP+NVL+ +GHI L+D
Sbjct: 193 ARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLAD------------------ 234
Query: 253 XXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEY 312
FGS L + + +S VGT +Y
Sbjct: 235 ---------------------------FGSC---------LKMNDDGTVQSSVAVGTPDY 258
Query: 313 VSPEVASG-----GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPT 367
+SPE+ G +G DWW+ G+ +YEM+YG TPF A S T I+ F
Sbjct: 259 ISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERF-- 316
Query: 368 QSPSSMSEY--HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEI 425
Q PS +++ A+DLI L+ RLG + G D K H FF+GLN+ IR+L P I
Sbjct: 317 QFPSHVTDVSEEAKDLIQRLICSRE-RRLG-QNGIEDFKKHAFFEGLNWENIRNLEAPYI 374
Query: 426 PGM 428
P +
Sbjct: 375 PDV 377
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 131 bits (330), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 105/363 (28%), Positives = 158/363 (43%), Gaps = 75/363 (20%)
Query: 73 RKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXX 132
++ L DF++ + IG G G V + + N R +YAM
Sbjct: 67 KEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTER---------IYAMKILNKWEMLKRAE 117
Query: 133 XHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTS 192
E+ +L D ++ L+ F+ N +VM++ GGDL +L K K
Sbjct: 118 TACFREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDK-LPEDM 176
Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXX 252
ARFY E+++A++ +H L ++RD+KP+NVL+ +GHI L+D
Sbjct: 177 ARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLAD------------------ 218
Query: 253 XXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEY 312
FGS L + + +S VGT +Y
Sbjct: 219 ---------------------------FGSC---------LKMNDDGTVQSSVAVGTPDY 242
Query: 313 VSPEVASG-----GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPT 367
+SPE+ G +G DWW+ G+ +YEM+YG TPF A S T I+ F
Sbjct: 243 ISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERF-- 300
Query: 368 QSPSSMSEY--HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEI 425
Q PS +++ A+DLI L+ RLG + G D K H FF+GLN+ IR+L P I
Sbjct: 301 QFPSHVTDVSEEAKDLIQRLICSRE-RRLG-QNGIEDFKKHAFFEGLNWENIRNLEAPYI 358
Query: 426 PGM 428
P +
Sbjct: 359 PDV 361
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 106/359 (29%), Positives = 150/359 (41%), Gaps = 85/359 (23%)
Query: 81 DFDLHRRIGAG-----------DIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXX 129
DF++ + IG G G VY + NK+ + E C
Sbjct: 62 DFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCF------------- 108
Query: 130 XXXXHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFS 189
E+ +L D ++ L+ F+ N+ +VME+ GGDL +L K +R
Sbjct: 109 -------REERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKF-GERIP 160
Query: 190 LTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXX 249
ARFY AE+++A++ +H LG ++RD+KP+N+L+ GHI L+DF L
Sbjct: 161 AEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCL---------- 210
Query: 250 XXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGT 309
R+ R + TP+ L P ++
Sbjct: 211 --------KLRADGTVRSL----------------VAVGTPDYL---SPEILQAVGGGPG 243
Query: 310 HEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIV--KKPLTFPT 367
PE DWWA G+F YEM YG+TPF A S T IV K+ L+ P
Sbjct: 244 TGSYGPE----------CDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPL 293
Query: 368 QSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEIP 426
E ARD I LL P RLG + GA D +THPFF GL++ +R PP P
Sbjct: 294 VDEGVPEE--ARDFIQRLLCP-PETRLG-RGGAGDFRTHPFFFGLDWDGLRDSVPPFTP 348
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 149/356 (41%), Gaps = 75/356 (21%)
Query: 77 LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRA 136
LT DF +HR IG G G VY C + D G +YAM A
Sbjct: 185 LTMNDFSVHRIIGRGGFGEVYGCR-----KADTGK----MYAMKCLDKKRIKMKQGETLA 235
Query: 137 EMEKKILKML---DHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSA 193
E+ +L ++ D PF+ + F + +++ +GGDLH H H FS
Sbjct: 236 LNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHY--HLSQHGVFSEADM 293
Query: 194 RFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXX 253
RFYAAE+++ LE++H ++YRDLKP N+L+ GH+ +SD L+ C
Sbjct: 294 RFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA-CD------------ 340
Query: 254 XXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYV 313
F KK ++A V + ++
Sbjct: 341 --------------------------FSKKKPHASVGTHGYMAPEVLQKGVAY------- 367
Query: 314 SPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSM 373
++ DW++ G +++++ G +PF + I + LT + P S
Sbjct: 368 ----------DSSADWFSLGCMLFKLLRGHSPFRQHKTKDK-HEIDRMTLTMAVELPDSF 416
Query: 374 SEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNFALI--RSLTPPEIP 426
S R L+ GLL +D RLG RGA +VK PFF+ L++ ++ + PP IP
Sbjct: 417 SP-ELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPLIP 471
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 149/356 (41%), Gaps = 75/356 (21%)
Query: 77 LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRA 136
LT DF +HR IG G G VY C + D G +YAM A
Sbjct: 186 LTMNDFSVHRIIGRGGFGEVYGCR-----KADTGK----MYAMKCLDKKRIKMKQGETLA 236
Query: 137 EMEKKILKML---DHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSA 193
E+ +L ++ D PF+ + F + +++ +GGDLH H H FS
Sbjct: 237 LNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHY--HLSQHGVFSEADM 294
Query: 194 RFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXX 253
RFYAAE+++ LE++H ++YRDLKP N+L+ GH+ +SD L+ C
Sbjct: 295 RFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA-CD------------ 341
Query: 254 XXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYV 313
F KK ++A V + ++
Sbjct: 342 --------------------------FSKKKPHASVGTHGYMAPEVLQKGVAY------- 368
Query: 314 SPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSM 373
++ DW++ G +++++ G +PF + I + LT + P S
Sbjct: 369 ----------DSSADWFSLGCMLFKLLRGHSPFRQHKTKDK-HEIDRMTLTMAVELPDSF 417
Query: 374 SEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNFALI--RSLTPPEIP 426
S R L+ GLL +D RLG RGA +VK PFF+ L++ ++ + PP IP
Sbjct: 418 SP-ELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPLIP 472
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 149/356 (41%), Gaps = 75/356 (21%)
Query: 77 LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRA 136
LT DF +HR IG G G VY C + D G +YAM A
Sbjct: 186 LTMNDFSVHRIIGRGGFGEVYGCR-----KADTGK----MYAMKCLDKKRIKMKQGETLA 236
Query: 137 EMEKKILKML---DHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSA 193
E+ +L ++ D PF+ + F + +++ +GGDLH H H FS
Sbjct: 237 LNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHY--HLSQHGVFSEADM 294
Query: 194 RFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXX 253
RFYAAE+++ LE++H ++YRDLKP N+L+ GH+ +SD L+ C
Sbjct: 295 RFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA-CD------------ 341
Query: 254 XXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYV 313
F KK ++A V + ++
Sbjct: 342 --------------------------FSKKKPHASVGTHGYMAPEVLQKGVAY------- 368
Query: 314 SPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSM 373
++ DW++ G +++++ G +PF + I + LT + P S
Sbjct: 369 ----------DSSADWFSLGCMLFKLLRGHSPFRQHKTKDK-HEIDRMTLTMAVELPDSF 417
Query: 374 SEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNFALI--RSLTPPEIP 426
S R L+ GLL +D RLG RGA +VK PFF+ L++ ++ + PP IP
Sbjct: 418 SP-ELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPLIP 472
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 149/356 (41%), Gaps = 75/356 (21%)
Query: 77 LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRA 136
LT DF +HR IG G G VY C + D G +YAM A
Sbjct: 186 LTMNDFSVHRIIGRGGFGEVYGCR-----KADTGK----MYAMKCLDKKRIKMKQGETLA 236
Query: 137 EMEKKILKML---DHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSA 193
E+ +L ++ D PF+ + F + +++ +GGDLH H H FS
Sbjct: 237 LNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHY--HLSQHGVFSEADM 294
Query: 194 RFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXX 253
RFYAAE+++ LE++H ++YRDLKP N+L+ GH+ +SD L+ C
Sbjct: 295 RFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA-CD------------ 341
Query: 254 XXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYV 313
F KK ++A V + ++
Sbjct: 342 --------------------------FSKKKPHASVGTHGYMAPEVLQKGVAY------- 368
Query: 314 SPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSM 373
++ DW++ G +++++ G +PF + I + LT + P S
Sbjct: 369 ----------DSSADWFSLGCMLFKLLRGHSPFRQHKTKDK-HEIDRMTLTMAVELPDSF 417
Query: 374 SEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNFALI--RSLTPPEIP 426
S R L+ GLL +D RLG RGA +VK PFF+ L++ ++ + PP IP
Sbjct: 418 SP-ELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPLIP 472
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 100/353 (28%), Positives = 139/353 (39%), Gaps = 69/353 (19%)
Query: 77 LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRA 136
+T F +R +G G G V C + + +YA A
Sbjct: 181 VTKNTFRQYRVLGKGGFGEVCACQVRATGK---------MYACKKLEKKRIKKRKGEAMA 231
Query: 137 EMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFY 196
EK+IL+ ++ F+ +L +E + C+V+ +GGDL + F A FY
Sbjct: 232 LNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFY 291
Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXX 256
AAE+ LE LH I+YRDLKPE +I+L D
Sbjct: 292 AAEICCGLEDLHRERIVYRDLKPE--------NILLDDH--------------------- 322
Query: 257 XXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE 316
G +I L L V P VGT Y++PE
Sbjct: 323 ------------------------GHIRISDLG---LAVHVPEGQTIKGRVGTVGYMAPE 355
Query: 317 VASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEY 376
V + + DWWA G +YEMI G++PF + + + P + S
Sbjct: 356 VVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSP- 414
Query: 377 HARDLISGLLNKDPCNRLGSKRGAA-DVKTHPFFKGLNFALIRS--LTPPEIP 426
AR L S LL KDP RLG + G+A +VK HP FK LNF + + L PP P
Sbjct: 415 QARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNFKRLGAGMLEPPFKP 467
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 100/353 (28%), Positives = 139/353 (39%), Gaps = 69/353 (19%)
Query: 77 LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRA 136
+T F +R +G G G V C + + +YA A
Sbjct: 181 VTKNTFRQYRVLGKGGFGEVCACQVRATGK---------MYACKKLEKKRIKKRKGEAMA 231
Query: 137 EMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFY 196
EK+IL+ ++ F+ +L +E + C+V+ +GGDL + F A FY
Sbjct: 232 LNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFY 291
Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXX 256
AAE+ LE LH I+YRDLKPE +I+L D
Sbjct: 292 AAEICCGLEDLHRERIVYRDLKPE--------NILLDDH--------------------- 322
Query: 257 XXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE 316
G +I L L V P VGT Y++PE
Sbjct: 323 ------------------------GHIRISDLG---LAVHVPEGQTIKGRVGTVGYMAPE 355
Query: 317 VASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEY 376
V + + DWWA G +YEMI G++PF + + + P + S
Sbjct: 356 VVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSP- 414
Query: 377 HARDLISGLLNKDPCNRLGSKRGAA-DVKTHPFFKGLNFALIRS--LTPPEIP 426
AR L S LL KDP RLG + G+A +VK HP FK LNF + + L PP P
Sbjct: 415 QARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNFKRLGAGMLEPPFKP 467
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 87/157 (55%), Gaps = 9/157 (5%)
Query: 82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
F+L + +G G G V+L R D GH LYAM R +ME+
Sbjct: 30 FELLKVLGQGSFGKVFLV--RKVTRPDSGH----LYAMKVLKKATLKVRDRV-RTKMERD 82
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
IL ++HPF+ L+ F+ ++++F GGDL + K+ F+ +FY AE+
Sbjct: 83 ILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV--MFTEEDVKFYLAELA 140
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ L++LH LGIIYRDLKPEN+L+ +GHI L+DF LS
Sbjct: 141 LGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLS 177
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 71/130 (54%), Gaps = 8/130 (6%)
Query: 302 RSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKK 361
++ SF GT EY++PEV + H ++ DWW++G+ ++EM+ G PF + T+ I+K
Sbjct: 186 KAYSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKA 245
Query: 362 PLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSK-RGAADVKTHPFFKGLNFALI--R 418
L P A+ L+ L ++P NRLGS GA ++K H F+ +++ + R
Sbjct: 246 KLGMP-----QFLSTEAQSLLRALFKRNPANRLGSGPDGAEEIKRHVFYSTIDWNKLYRR 300
Query: 419 SLTPPEIPGM 428
+ PP P +
Sbjct: 301 EIKPPFKPAV 310
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 88/157 (56%), Gaps = 9/157 (5%)
Query: 82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
F+L + +G G G V+L ++ G + LYAM R +ME+
Sbjct: 26 FELLKVLGQGSFGKVFLV------KKISGSDARQLYAMKVLKKATLKVRDRV-RTKMERD 78
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
IL ++HPF+ L+ F+ ++++F GGDL + K+ F+ +FY AE+
Sbjct: 79 ILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV--MFTEEDVKFYLAELA 136
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+AL++LH LGIIYRDLKPEN+L+ +GHI L+DF LS
Sbjct: 137 LALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLS 173
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 71/133 (53%), Gaps = 10/133 (7%)
Query: 302 RSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKK 361
++ SF GT EY++PEV + H + DWW+FG+ ++EM+ G PF + T+ I+K
Sbjct: 182 KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKA 241
Query: 362 PLTFPT-QSPSSMSEYHARDLISGLLNKDPCNRLGSK-RGAADVKTHPFFKGLNFALI-- 417
L P SP + S L+ L ++P NRLG+ G ++K H FF +++ +
Sbjct: 242 KLGMPQFLSPEAQS------LLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYR 295
Query: 418 RSLTPPEIPGMRR 430
R + PP P R
Sbjct: 296 REIHPPFKPATGR 308
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 88/157 (56%), Gaps = 9/157 (5%)
Query: 82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
F+L + +G G G V+L ++ G + LYAM R +ME+
Sbjct: 26 FELLKVLGQGSFGKVFLV------KKISGSDARQLYAMKVLKKATLKVRDRV-RTKMERD 78
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
IL ++HPF+ L+ F+ ++++F GGDL + K+ F+ +FY AE+
Sbjct: 79 ILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV--MFTEEDVKFYLAELA 136
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+AL++LH LGIIYRDLKPEN+L+ +GHI L+DF LS
Sbjct: 137 LALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLS 173
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 70/129 (54%), Gaps = 10/129 (7%)
Query: 302 RSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKK 361
++ SF GT EY++PEV + H + DWW+FG+ ++EM+ G PF + T+ I+K
Sbjct: 182 KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKA 241
Query: 362 PLTFPT-QSPSSMSEYHARDLISGLLNKDPCNRLGSK-RGAADVKTHPFFKGLNFALI-- 417
L P SP A+ L+ L ++P NRLG+ G ++K H FF +++ +
Sbjct: 242 KLGMPQFLSPE------AQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYR 295
Query: 418 RSLTPPEIP 426
R + PP P
Sbjct: 296 REIHPPFKP 304
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 88/157 (56%), Gaps = 9/157 (5%)
Query: 82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
F+L + +G G G V+L ++ G + LYAM R +ME+
Sbjct: 27 FELLKVLGQGSFGKVFLV------KKISGSDARQLYAMKVLKKATLKVRDRV-RTKMERD 79
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
IL ++HPF+ L+ F+ ++++F GGDL + K+ F+ +FY AE+
Sbjct: 80 ILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV--MFTEEDVKFYLAELA 137
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+AL++LH LGIIYRDLKPEN+L+ +GHI L+DF LS
Sbjct: 138 LALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLS 174
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 70/129 (54%), Gaps = 10/129 (7%)
Query: 302 RSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKK 361
++ SF GT EY++PEV + H + DWW+FG+ ++EM+ G PF + T+ I+K
Sbjct: 183 KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKA 242
Query: 362 PLTFPT-QSPSSMSEYHARDLISGLLNKDPCNRLGSK-RGAADVKTHPFFKGLNFALI-- 417
L P SP A+ L+ L ++P NRLG+ G ++K H FF +++ +
Sbjct: 243 KLGMPQFLSPE------AQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYR 296
Query: 418 RSLTPPEIP 426
R + PP P
Sbjct: 297 REIHPPFKP 305
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 83/158 (52%), Gaps = 11/158 (6%)
Query: 78 TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAE 137
+ +DF + R +G G G V+L R YAM
Sbjct: 4 SLQDFQILRTLGTGSFGRVHLI---------RSRHNGRYYAMKVLKKEIVVRLKQVEHTN 54
Query: 138 MEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYA 197
E+ +L ++ HPF+ ++ F+ + ++M++ GG+L SL K +RF A+FYA
Sbjct: 55 DERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKS--QRFPNPVAKFYA 112
Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDF 235
AEV +ALEYLH IIYRDLKPEN+L+ +GHI ++DF
Sbjct: 113 AEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDF 150
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 74/138 (53%), Gaps = 8/138 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
A+ V + GT +Y++PEV S + ++DWW+FGI IYEM+ G TPF + T
Sbjct: 153 AKYVPDVTYXLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTY 212
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
I+ L FP +DL+S L+ +D RLG+ + G DVK HP+FK + +
Sbjct: 213 EKILNAELRFP-----PFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEVVW 267
Query: 415 A--LIRSLTPPEIPGMRR 430
L R++ P P +++
Sbjct: 268 EKLLSRNIETPYEPPIQQ 285
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 86/165 (52%), Gaps = 12/165 (7%)
Query: 74 KTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXX 133
+ L DF LH+ +G G G V+L + +A+
Sbjct: 11 QIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQ---------FFAIKALKKDVVLMDDDV 61
Query: 134 HRAEMEKKILKM-LDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTS 192
+EK++L + +HPFL ++ F+ VME+ +GGDL + H Q +F L+
Sbjct: 62 ECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDL--MYHIQSCHKFDLSR 119
Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDL 237
A FYAAE+++ L++LH GI+YRDLK +N+L+ DGHI ++DF +
Sbjct: 120 ATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGM 164
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 72/131 (54%), Gaps = 10/131 (7%)
Query: 301 ARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK 360
A++ F GT +Y++PE+ G + ++VDWW+FG+ +YEM+ G++PF E +I
Sbjct: 173 AKTNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRM 232
Query: 361 KPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALI--R 418
+P E A+DL+ L ++P RLG + D++ HP F+ +N+ + +
Sbjct: 233 DNPFYP-----RWLEKEAKDLLVKLFVREPEKRLGVR---GDIRQHPLFREINWEELERK 284
Query: 419 SLTPPEIPGMR 429
+ PP P ++
Sbjct: 285 EIDPPFRPKVK 295
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 85/169 (50%), Gaps = 14/169 (8%)
Query: 77 LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRA 136
L +F+ R +G G G V L R E LYA+
Sbjct: 20 LGIDNFEFIRVLGKGSFGKVMLA---------RVKETGDLYAVKVLKKDVILQDDDVECT 70
Query: 137 EMEKKILKML-DHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARF 195
EK+IL + +HPFL L+ F+ + VMEF +GGDL + H Q +RF ARF
Sbjct: 71 MTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDL--MFHIQKSRRFDEARARF 128
Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAI 244
YAAE++ AL +LH GIIYRDLK +NVL+ +GH L+DF +C I
Sbjct: 129 YAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADF--GMCKEGI 175
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 76/150 (50%), Gaps = 10/150 (6%)
Query: 300 AARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIV 359
+ +F GT +Y++PE+ +G AVDWWA G+ +YEM+ G PF A + + I+
Sbjct: 178 GVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAIL 237
Query: 360 KKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS--KRGAADVKTHPFFKGLNFALI 417
+ +PT A ++ + K+P RLGS + G + HPFFK +++A +
Sbjct: 238 NDEVVYPTWLHED-----ATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKEIDWAQL 292
Query: 418 --RSLTPPEIPGMR-RQKTMPFPDQKIKSQ 444
R + PP P ++ R+ F IK +
Sbjct: 293 NHRQIEPPFRPRIKSREDVSNFDPDFIKEE 322
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 81/171 (47%), Gaps = 13/171 (7%)
Query: 74 KTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXX 133
+ +T DFD + +G G G V L R YAM
Sbjct: 2 RAKVTMNDFDYLKLLGKGTFGKVILVREKATGR---------YYAMKILRKEVIIAKDEV 52
Query: 134 HRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSA 193
E ++L+ HPFL L F+ + C VME+ +GG+L H + F+ A
Sbjct: 53 AHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERA 110
Query: 194 RFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAI 244
RFY AE++ ALEYLH ++YRD+K EN+++ DGHI ++DF LC I
Sbjct: 111 RFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDF--GLCKEGI 159
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 77/145 (53%), Gaps = 10/145 (6%)
Query: 305 SFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT 364
+F GT EY++PEV +G AVDWW G+ +YEM+ GR PF +E I+ + +
Sbjct: 167 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR 226
Query: 365 FP-TQSPSSMSEYHARDLISGLLNKDPCNRLGSK-RGAADVKTHPFFKGLNFALI--RSL 420
FP T SP A+ L++GLL KDP RLG A +V H FF +N+ + + L
Sbjct: 227 FPRTLSPE------AKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKL 280
Query: 421 TPPEIPGMRRQKTMPFPDQKIKSQS 445
PP P + + + D + +QS
Sbjct: 281 LPPFKPQVTSEVDTRYFDDEFTAQS 305
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 85/157 (54%), Gaps = 11/157 (7%)
Query: 82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
FD + +G G G V L K+++ H YAM EK+
Sbjct: 43 FDRIKTLGTGSFGRVMLV----KHKESGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
IL+ ++ PFL L F+ ++ +VME+ +GG++ S H + RFS ARFYAA+++
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPHARFYAAQIV 151
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ EYLH L +IYRDLKPEN+L+ G+I ++DF +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 65/137 (47%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
A+ V R+ GT EY++P + + AVDWWA G+ IYEM G PF A
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
IV + FP+ S + +DL+ LL D R G+ K G D+K H +F ++
Sbjct: 248 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
Query: 415 ALI--RSLTPPEIPGMR 429
I R + P IP +
Sbjct: 303 IAIYQRKVEAPFIPKFK 319
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 85/157 (54%), Gaps = 11/157 (7%)
Query: 82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
FD + +G G G V L K+++ H YAM EK+
Sbjct: 43 FDRIKTLGTGSFGRVMLV----KHKESGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
IL+ ++ PFL L F+ ++ +VME+ +GG++ S H + RFS ARFYAA+++
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPHARFYAAQIV 151
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ EYLH L +IYRDLKPEN+L+ G+I ++DF +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
A+ V R+ GT EY++PE+ + AVDWWA G+ IYEM G PF A
Sbjct: 188 AKRVKGRTWXLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
IV + FP+ S + +DL+ LL D R G+ K G D+K H +F ++
Sbjct: 248 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
Query: 415 ALI--RSLTPPEIPGMR 429
I R + P IP +
Sbjct: 303 IAIYQRKVEAPFIPKFK 319
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 85/157 (54%), Gaps = 11/157 (7%)
Query: 82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
FD + +G G G V L K+++ H YAM EK+
Sbjct: 43 FDRIKTLGTGSFGRVMLV----KHKESGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
IL+ ++ PFL L F+ ++ +VME+ +GG++ S H + RFS ARFYAA+++
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPHARFYAAQIV 151
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ EYLH L +IYRDLKPEN+L+ G+I ++DF +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 65/137 (47%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
A+ V R+ GT EY++PE+ + AVDWWA G+ IYEM G PF A
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
IV + FP+ S + +DL+ LL D R G+ G D+K H +F ++
Sbjct: 248 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLPNGVNDIKNHKWFATTDW 302
Query: 415 ALI--RSLTPPEIPGMR 429
I R + P IP +
Sbjct: 303 IAIYQRKVEAPFIPKFK 319
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 85/157 (54%), Gaps = 11/157 (7%)
Query: 82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
FD + +G G G V L K+++ H YAM EK+
Sbjct: 43 FDRIKTLGTGSFGRVMLV----KHKESGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
IL+ ++ PFL L F+ ++ +VME+ +GG++ S H + RFS ARFYAA+++
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPHARFYAAQIV 151
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ EYLH L +IYRDLKPEN+L+ G+I ++DF +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
A+ V R+ GT EY++PE+ + AVDWWA G+ IYEM G PF A
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
IV + FP+ S + +DL+ LL D R G+ K G D+K H +F ++
Sbjct: 248 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
Query: 415 ALI--RSLTPPEIPGMR 429
I R + P IP +
Sbjct: 303 IAIYQRKVEAPFIPKFK 319
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 85/157 (54%), Gaps = 11/157 (7%)
Query: 82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
FD + +G G G V L K+++ H YAM EK+
Sbjct: 43 FDRIKTLGTGSFGRVMLV----KHKESGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
IL+ ++ PFL L F+ ++ +VME+ +GG++ S H + RFS ARFYAA+++
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPHARFYAAQIV 151
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ EYLH L +IYRDLKPEN+L+ G+I ++DF +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
A+ V R+ GT EY++PE+ + AVDWWA G+ IYEM G PF A
Sbjct: 188 AKRVKGRTWXLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
IV + FP+ S + +DL+ LL D R G+ K G D+K H +F ++
Sbjct: 248 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
Query: 415 ALI--RSLTPPEIPGMR 429
I R + P IP +
Sbjct: 303 IAIYQRKVEAPFIPKFK 319
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 85/157 (54%), Gaps = 11/157 (7%)
Query: 82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
FD + +G G G V L K+++ H YAM EK+
Sbjct: 43 FDRIKTLGTGSFGRVMLV----KHKESGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
IL+ ++ PFL L F+ ++ +VME+ +GG++ S H + RFS ARFYAA+++
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPHARFYAAQIV 151
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ EYLH L +IYRDLKPEN+L+ G+I ++DF +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
A+ V R+ GT EY++PE+ + AVDWWA G+ IY+M G PF A
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPPFFADQPIQIY 247
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
IV + FP+ S + +DL+ LL D R G+ K G D+K H +F ++
Sbjct: 248 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
Query: 415 ALI--RSLTPPEIPGMR 429
I R + P IP +
Sbjct: 303 IAIYQRKVEAPFIPKFK 319
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 85/157 (54%), Gaps = 11/157 (7%)
Query: 82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
FD + +G G G V L K+++ H YAM EK+
Sbjct: 43 FDRIKTLGTGSFGRVMLV----KHKESGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
IL+ ++ PFL L F+ ++ +VME+ +GG++ S H + RFS ARFYAA+++
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPHARFYAAQIV 151
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ EYLH L +IYRDLKPEN+L+ G+I ++DF +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 65/137 (47%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
A+ V R+ GT EY++PE+ + AVDWWA G+ IYEM G PF A
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
IV + FP+ S + +DL+ LL D G+ K G D+K H +F ++
Sbjct: 248 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKAFGNLKNGVNDIKNHKWFATTDW 302
Query: 415 ALI--RSLTPPEIPGMR 429
I R + P IP +
Sbjct: 303 IAIYQRKVEAPFIPKFK 319
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 85/157 (54%), Gaps = 11/157 (7%)
Query: 82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
FD + +G G G V L K+++ H YAM EK+
Sbjct: 43 FDRIKTLGTGSFGRVMLV----KHKESGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
IL+ ++ PFL L F+ ++ +VME+ +GG++ S H + RFS ARFYAA+++
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPHARFYAAQIV 151
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ EYLH L +IYRDLKPEN+L+ G+I ++DF +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
A+ V R+ GT EY++PE+ + AVDWWA G+ IYEM G PF A
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
IV + FP+ S + +DL+ LL D R G+ K G D+K H +F ++
Sbjct: 248 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
Query: 415 ALI--RSLTPPEIPGMR 429
I R + P IP +
Sbjct: 303 IAIYQRKVEAPFIPKFK 319
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 85/157 (54%), Gaps = 11/157 (7%)
Query: 82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
FD + +G G G V L K+++ H YAM EK+
Sbjct: 43 FDRIKTLGTGSFGRVMLV----KHKESGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
IL+ ++ PFL L F+ ++ +VME+ +GG++ S H + RFS ARFYAA+++
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPHARFYAAQIV 151
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ EYLH L +IYRDLKPEN+L+ G+I ++DF +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
A+ V R+ GT EY++PE+ + AVDWWA G+ IYEM G PF A
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADEPIQIY 247
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
IV + FP+ S + +DL+ LL D R G+ K G D+K H +F ++
Sbjct: 248 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
Query: 415 ALI--RSLTPPEIPGMR 429
I R + P IP +
Sbjct: 303 IAIYQRKVEAPFIPKFK 319
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 80/168 (47%), Gaps = 13/168 (7%)
Query: 77 LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRA 136
+T DFD + +G G G V L R YAM
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGR---------YYAMKILRKEVIIAKDEVAHT 52
Query: 137 EMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFY 196
E ++L+ HPFL L F+ + C VME+ +GG+L H + F+ ARFY
Sbjct: 53 VTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFY 110
Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAI 244
AE++ ALEYLH ++YRD+K EN+++ DGHI ++DF LC I
Sbjct: 111 GAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDF--GLCKEGI 156
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 78/150 (52%), Gaps = 10/150 (6%)
Query: 300 AARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIV 359
A +F GT EY++PEV +G AVDWW G+ +YEM+ GR PF +E I+
Sbjct: 159 GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL 218
Query: 360 KKPLTFP-TQSPSSMSEYHARDLISGLLNKDPCNRLGSK-RGAADVKTHPFFKGLNFALI 417
+ + FP T SP A+ L++GLL KDP RLG A +V H FF +N+ +
Sbjct: 219 MEEIRFPRTLSPE------AKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDV 272
Query: 418 --RSLTPPEIPGMRRQKTMPFPDQKIKSQS 445
+ L PP P + + + D + +QS
Sbjct: 273 VQKKLLPPFKPQVTSEVDTRYFDDEFTAQS 302
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 85/157 (54%), Gaps = 11/157 (7%)
Query: 82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
FD + +G G G V L K+++ H YAM EK+
Sbjct: 44 FDRIKTLGTGSFGRVMLV----KHKESGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 94
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
IL+ ++ PFL L F+ ++ +VME+ +GG++ S H + RFS ARFYAA+++
Sbjct: 95 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPHARFYAAQIV 152
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ EYLH L +IYRDLKPEN+L+ G+I ++DF +
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 189
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
A+ V R+ GT EY++PE+ + AVDWWA G+ IYEM G PF A
Sbjct: 189 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 248
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
IV + FP+ S + +DL+ LL D R G+ K G D+K H +F ++
Sbjct: 249 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 303
Query: 415 ALI--RSLTPPEIPGMR 429
I R + P IP +
Sbjct: 304 IAIYQRKVEAPFIPKFK 320
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 85/157 (54%), Gaps = 11/157 (7%)
Query: 82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
FD + +G G G V L K+++ H YAM EK+
Sbjct: 43 FDRIKTLGTGSFGRVMLV----KHKESGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
IL+ ++ PFL L F+ ++ +VME+ +GG++ S H + RFS ARFYAA+++
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPHARFYAAQIV 151
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ EYLH L +IYRDLKPEN+L+ G+I ++DF +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 65/137 (47%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
A+ V R+ GT E ++PE+ + AVDWWA G+ IYEM G PF A
Sbjct: 188 AKRVKGRTWXLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
IV + FP+ S + +DL+ LL D R G+ K G D+K H +F ++
Sbjct: 248 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
Query: 415 ALI--RSLTPPEIPGMR 429
I R + P IP +
Sbjct: 303 IAIYQRKVEAPFIPKFK 319
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 85/157 (54%), Gaps = 11/157 (7%)
Query: 82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
FD + +G G G V L K+++ H YAM EK+
Sbjct: 64 FDRIKTLGTGSFGRVMLV----KHKESGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 114
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
IL+ ++ PFL L F+ ++ +VME+ +GG++ S H + RFS ARFYAA+++
Sbjct: 115 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPHARFYAAQIV 172
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ EYLH L +IYRDLKPEN+L+ G+I ++DF +
Sbjct: 173 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 209
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
A+ V + + GT EY++PE+ + AVDWWA G+ IYEM G PF A
Sbjct: 209 AKRVKGATWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 268
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
IV + FP+ S + +DL+ LL D R G+ K G D+K H +F ++
Sbjct: 269 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 323
Query: 415 ALI--RSLTPPEIPGMR 429
I R + P IP +
Sbjct: 324 IAIYQRKVEAPFIPKFK 340
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 80/168 (47%), Gaps = 13/168 (7%)
Query: 77 LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRA 136
+T DFD + +G G G V L R YAM
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGR---------YYAMKILRKEVIIAKDEVAHT 52
Query: 137 EMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFY 196
E ++L+ HPFL L F+ + C VME+ +GG+L H + F+ ARFY
Sbjct: 53 VTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFY 110
Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAI 244
AE++ ALEYLH ++YRD+K EN+++ DGHI ++DF LC I
Sbjct: 111 GAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDF--GLCKEGI 156
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 77/145 (53%), Gaps = 10/145 (6%)
Query: 305 SFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT 364
+F GT EY++PEV +G AVDWW G+ +YEM+ GR PF +E I+ + +
Sbjct: 164 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR 223
Query: 365 FP-TQSPSSMSEYHARDLISGLLNKDPCNRLGSK-RGAADVKTHPFFKGLNFALI--RSL 420
FP T SP A+ L++GLL KDP RLG A +V H FF +N+ + + L
Sbjct: 224 FPRTLSPE------AKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKL 277
Query: 421 TPPEIPGMRRQKTMPFPDQKIKSQS 445
PP P + + + D + +QS
Sbjct: 278 LPPFKPQVTSEVDTRYFDDEFTAQS 302
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 80/168 (47%), Gaps = 13/168 (7%)
Query: 77 LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRA 136
+T DFD + +G G G V L R YAM
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGR---------YYAMKILRKEVIIAKDEVAHT 52
Query: 137 EMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFY 196
E ++L+ HPFL L F+ + C VME+ +GG+L H + F+ ARFY
Sbjct: 53 VTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFY 110
Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAI 244
AE++ ALEYLH ++YRD+K EN+++ DGHI ++DF LC I
Sbjct: 111 GAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDF--GLCKEGI 156
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 76/144 (52%), Gaps = 10/144 (6%)
Query: 306 FVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTF 365
F GT EY++PEV +G AVDWW G+ +YEM+ GR PF +E I+ + + F
Sbjct: 165 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRF 224
Query: 366 P-TQSPSSMSEYHARDLISGLLNKDPCNRLGSK-RGAADVKTHPFFKGLNFALI--RSLT 421
P T SP A+ L++GLL KDP RLG A +V H FF +N+ + + L
Sbjct: 225 PRTLSPE------AKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLL 278
Query: 422 PPEIPGMRRQKTMPFPDQKIKSQS 445
PP P + + + D + +QS
Sbjct: 279 PPFKPQVTSEVDTRYFDDEFTAQS 302
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 85/157 (54%), Gaps = 11/157 (7%)
Query: 82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
FD + +G G G V L K+++ H YAM EK+
Sbjct: 30 FDRIKTLGTGSFGRVMLV----KHKESGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 80
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
IL+ ++ PFL L F+ ++ +VME+ +GG++ S H + RFS ARFYAA+++
Sbjct: 81 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPHARFYAAQIV 138
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ EYLH L +IYRDLKPEN+L+ G+I ++DF +
Sbjct: 139 LTFEYLHSLDLIYRDLKPENLLIDEQGYIQVTDFGFA 175
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
A+ V R+ GT EY++PE+ + AVDWWA G+ IYEM G PF A
Sbjct: 175 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 234
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
IV + FP+ S + +DL+ LL D R G+ K G D+K H +F ++
Sbjct: 235 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 289
Query: 415 ALI--RSLTPPEIPGMR 429
I R + P IP +
Sbjct: 290 IAIYQRKVEAPFIPKFK 306
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 80/168 (47%), Gaps = 13/168 (7%)
Query: 77 LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRA 136
+T DFD + +G G G V L R YAM
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGR---------YYAMKILRKEVIIAKDEVAHT 52
Query: 137 EMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFY 196
E ++L+ HPFL L F+ + C VME+ +GG+L H + F+ ARFY
Sbjct: 53 VTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFY 110
Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAI 244
AE++ ALEYLH ++YRD+K EN+++ DGHI ++DF LC I
Sbjct: 111 GAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDF--GLCKEGI 156
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 76/144 (52%), Gaps = 10/144 (6%)
Query: 306 FVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTF 365
F GT EY++PEV +G AVDWW G+ +YEM+ GR PF +E I+ + + F
Sbjct: 165 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRF 224
Query: 366 P-TQSPSSMSEYHARDLISGLLNKDPCNRLGSK-RGAADVKTHPFFKGLNFALI--RSLT 421
P T SP A+ L++GLL KDP RLG A +V H FF +N+ + + L
Sbjct: 225 PRTLSPE------AKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLL 278
Query: 422 PPEIPGMRRQKTMPFPDQKIKSQS 445
PP P + + + D + +QS
Sbjct: 279 PPFKPQVTSEVDTRYFDDEFTAQS 302
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 80/168 (47%), Gaps = 13/168 (7%)
Query: 77 LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRA 136
+T DFD + +G G G V L R YAM
Sbjct: 7 VTMNDFDYLKLLGKGTFGKVILVREKATGR---------YYAMKILRKEVIIAKDEVAHT 57
Query: 137 EMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFY 196
E ++L+ HPFL L F+ + C VME+ +GG+L H + F+ ARFY
Sbjct: 58 VTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFY 115
Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAI 244
AE++ ALEYLH ++YRD+K EN+++ DGHI ++DF LC I
Sbjct: 116 GAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDF--GLCKEGI 161
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 76/144 (52%), Gaps = 10/144 (6%)
Query: 306 FVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTF 365
F GT EY++PEV +G AVDWW G+ +YEM+ GR PF +E I+ + + F
Sbjct: 170 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRF 229
Query: 366 P-TQSPSSMSEYHARDLISGLLNKDPCNRLGSK-RGAADVKTHPFFKGLNFALI--RSLT 421
P T SP A+ L++GLL KDP RLG A +V H FF +N+ + + L
Sbjct: 230 PRTLSPE------AKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLL 283
Query: 422 PPEIPGMRRQKTMPFPDQKIKSQS 445
PP P + + + D + +QS
Sbjct: 284 PPFKPQVTSEVDTRYFDDEFTAQS 307
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 80/168 (47%), Gaps = 13/168 (7%)
Query: 77 LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRA 136
+T DFD + +G G G V L R YAM
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILV---------REKATGRYYAMKILRKEVIIAKDEVAHT 52
Query: 137 EMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFY 196
E ++L+ HPFL L F+ + C VME+ +GG+L H + F+ ARFY
Sbjct: 53 VTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFY 110
Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAI 244
AE++ ALEYLH ++YRD+K EN+++ DGHI ++DF LC I
Sbjct: 111 GAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDF--GLCKEGI 156
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 76/144 (52%), Gaps = 10/144 (6%)
Query: 306 FVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTF 365
F GT EY++PEV +G AVDWW G+ +YEM+ GR PF +E I+ + + F
Sbjct: 165 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRF 224
Query: 366 P-TQSPSSMSEYHARDLISGLLNKDPCNRLGSK-RGAADVKTHPFFKGLNFALI--RSLT 421
P T SP A+ L++GLL KDP RLG A +V H FF +N+ + + L
Sbjct: 225 PRTLSPE------AKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLL 278
Query: 422 PPEIPGMRRQKTMPFPDQKIKSQS 445
PP P + + + D + +QS
Sbjct: 279 PPFKPQVTSEVDTRYFDDEFTAQS 302
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 85/157 (54%), Gaps = 11/157 (7%)
Query: 82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
FD + +G G G V L K+++ H YAM EK+
Sbjct: 43 FDRIKTLGTGSFGRVMLV----KHKESGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
IL+ ++ PFL L F+ ++ +VME+ +GG++ S H + RFS ARFYAA+++
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPHARFYAAQIV 151
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ EYLH L +IYRDLKPEN+++ G+I ++DF +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLIIDQQGYIQVTDFGFA 188
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
A+ V R+ GT EY++PE+ + AVDWWA G+ IYEM G PF A
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
IV + FP+ S + +DL+ LL D R G+ K G D+K H +F ++
Sbjct: 248 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
Query: 415 ALI--RSLTPPEIPGMR 429
I R + P IP +
Sbjct: 303 IAIYQRKVEAPFIPKFK 319
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 85/157 (54%), Gaps = 11/157 (7%)
Query: 82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
FD + +G G G V L K+++ H YAM EK+
Sbjct: 43 FDRIKTLGTGSFGRVMLV----KHKESGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
IL+ ++ PFL L F+ ++ +VME+ +GG++ S H + RF+ ARFYAA+++
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFAEPHARFYAAQIV 151
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ EYLH L +IYRDLKPEN+L+ G+I ++DF +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
A+ V R+ GT EY++PE+ + AVDWWA G+ IYEM G PF A
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
IV + FP+ S + +DL+ LL D R G+ K G D+K H +F ++
Sbjct: 248 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
Query: 415 ALI--RSLTPPEIPGMR 429
I R + P IP +
Sbjct: 303 IAIYQRKVEAPFIPKFK 319
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 84/157 (53%), Gaps = 11/157 (7%)
Query: 82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
FD + +G G G V L K+++ H YAM EK+
Sbjct: 43 FDRIKTLGTGSFGRVMLV----KHKESGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
IL+ ++ PFL L F+ ++ +VME+ +GG++ S H + RF ARFYAA+++
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFXEPHARFYAAQIV 151
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ EYLH L +IYRDLKPEN+L+ G+I ++DF +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
A+ V R+ GT EY++PE+ + AVDWWA G+ IYEM G PF A
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
IV + FP+ S + +DL+ LL D R G+ K G D+K H +F ++
Sbjct: 248 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
Query: 415 ALI--RSLTPPEIPGMR 429
I R + P IP +
Sbjct: 303 IAIYQRKVEAPFIPKFK 319
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 84/157 (53%), Gaps = 11/157 (7%)
Query: 82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
FD + +G G G V L K+++ H YAM EK+
Sbjct: 43 FDRIKTLGTGSFGRVMLV----KHKESGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
IL+ ++ PFL L F+ ++ +VME+ +GG++ S H + RF ARFYAA+++
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFXEPHARFYAAQIV 151
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ EYLH L +IYRDLKPEN+L+ G+I ++DF +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
A+ V R+ GT EY++PE+ + AVDWWA G+ IYEM G PF A
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
IV + FP+ S + +DL+ LL D R G+ K G D+K H +F ++
Sbjct: 248 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
Query: 415 ALI--RSLTPPEIPGMR 429
I R + P IP +
Sbjct: 303 IAIYQRKVEAPFIPKFK 319
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 84/157 (53%), Gaps = 11/157 (7%)
Query: 82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
FD + +G G G V L K+++ H YAM EK+
Sbjct: 64 FDRIKTLGTGSFGRVMLV----KHKESGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 114
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
IL+ ++ PFL L F+ ++ +VME+ +GG++ S H + RF ARFYAA+++
Sbjct: 115 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFXEPHARFYAAQIV 172
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ EYLH L +IYRDLKPEN+L+ G+I ++DF +
Sbjct: 173 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 209
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
A+ V R+ GT EY++PE+ + AVDWWA G+ IYEM G PF A
Sbjct: 209 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 268
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
IV + FP+ S + +DL+ LL D R G+ K G D+K H +F ++
Sbjct: 269 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 323
Query: 415 ALI--RSLTPPEIPGMR 429
I R + P IP +
Sbjct: 324 IAIYQRKVEAPFIPKFK 340
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 84/157 (53%), Gaps = 11/157 (7%)
Query: 82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
FD + +G G G V L K+++ H YAM EK+
Sbjct: 43 FDRIKTLGTGSFGRVMLV----KHKESGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
IL+ ++ PFL L F+ ++ +VME+ +GG++ S H + RF ARFYAA+++
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFXEPHARFYAAQIV 151
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ EYLH L +IYRDLKPEN+L+ G+I ++DF +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
A+ V R+ GT EY++PE+ + AVDWWA G+ IYEM G PF A
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
IV + FP+ S + +DL+ LL D R G+ K G D+K H +F ++
Sbjct: 248 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
Query: 415 ALI--RSLTPPEIPGMR 429
I R + P IP +
Sbjct: 303 IAIYQRKVEAPFIPKFK 319
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 84/157 (53%), Gaps = 11/157 (7%)
Query: 82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
FD + +G G G V L K+++ H YAM EK+
Sbjct: 38 FDRIKTLGTGSFGRVMLV----KHKESGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 88
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
IL+ ++ PFL L F+ ++ +VME+ +GG++ S H + RF ARFYAA+++
Sbjct: 89 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFXEPHARFYAAQIV 146
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ EYLH L +IYRDLKPEN+L+ G+I ++DF +
Sbjct: 147 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 183
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
A+ V R+ GT EY++PE+ + AVDWWA G+ IYEM G PF A
Sbjct: 183 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 242
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
IV + FP+ S + +DL+ LL D R G+ K G D+K H +F ++
Sbjct: 243 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 297
Query: 415 ALI--RSLTPPEIPGMR 429
I R + P IP +
Sbjct: 298 IAIYQRKVEAPFIPKFK 314
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 76/143 (53%), Gaps = 10/143 (6%)
Query: 306 FVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTF 365
F GT EY++PEV +G AVDWW G+ +YEM+ GR PF +E I+ + + F
Sbjct: 169 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRF 228
Query: 366 P-TQSPSSMSEYHARDLISGLLNKDPCNRL-GSKRGAADVKTHPFFKGLNFALI--RSLT 421
P T P A+ L+SGLL KDP RL G A ++ H FF G+ + + + L+
Sbjct: 229 PRTLGPE------AKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLS 282
Query: 422 PPEIPGMRRQKTMPFPDQKIKSQ 444
PP P + + + D++ +Q
Sbjct: 283 PPFKPQVTSETDTRYFDEEFTAQ 305
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 80/169 (47%), Gaps = 14/169 (8%)
Query: 77 LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRA 136
+T +F+ + +G G G V L R YAM
Sbjct: 5 VTMNEFEYLKLLGKGTFGKVILVKEKATGR---------YYAMKILKKEVIVAKDEVAHT 55
Query: 137 EMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFY 196
E ++L+ HPFL L F+ + C VME+ +GG+L H + FS ARFY
Sbjct: 56 LTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL--FFHLSRERVFSEDRARFY 113
Query: 197 AAEVLVALEYLH-MLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAI 244
AE++ AL+YLH ++YRDLK EN+++ DGHI ++DF LC I
Sbjct: 114 GAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDF--GLCKEGI 160
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 76/143 (53%), Gaps = 10/143 (6%)
Query: 306 FVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTF 365
F GT EY++PEV +G AVDWW G+ +YEM+ GR PF +E I+ + + F
Sbjct: 170 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRF 229
Query: 366 P-TQSPSSMSEYHARDLISGLLNKDPCNRL-GSKRGAADVKTHPFFKGLNFALI--RSLT 421
P T P A+ L+SGLL KDP RL G A ++ H FF G+ + + + L+
Sbjct: 230 PRTLGPE------AKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLS 283
Query: 422 PPEIPGMRRQKTMPFPDQKIKSQ 444
PP P + + + D++ +Q
Sbjct: 284 PPFKPQVTSETDTRYFDEEFTAQ 306
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 81/174 (46%), Gaps = 14/174 (8%)
Query: 72 GRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXX 131
G +T +F+ + +G G G V L R YAM
Sbjct: 1 GAMARVTMNEFEYLKLLGKGTFGKVILVKEKATGR---------YYAMKILKKEVIVAKD 51
Query: 132 XXHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLT 191
E ++L+ HPFL L F+ + C VME+ +GG+L H + FS
Sbjct: 52 EVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL--FFHLSRERVFSED 109
Query: 192 SARFYAAEVLVALEYLH-MLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAI 244
ARFY AE++ AL+YLH ++YRDLK EN+++ DGHI ++DF LC I
Sbjct: 110 RARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDF--GLCKEGI 161
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 76/143 (53%), Gaps = 10/143 (6%)
Query: 306 FVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTF 365
F GT EY++PEV +G AVDWW G+ +YEM+ GR PF +E I+ + + F
Sbjct: 171 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRF 230
Query: 366 P-TQSPSSMSEYHARDLISGLLNKDPCNRL-GSKRGAADVKTHPFFKGLNFALI--RSLT 421
P T P A+ L+SGLL KDP RL G A ++ H FF G+ + + + L+
Sbjct: 231 PRTLGPE------AKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLS 284
Query: 422 PPEIPGMRRQKTMPFPDQKIKSQ 444
PP P + + + D++ +Q
Sbjct: 285 PPFKPQVTSETDTRYFDEEFTAQ 307
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 80/169 (47%), Gaps = 14/169 (8%)
Query: 77 LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRA 136
+T +F+ + +G G G V L R YAM
Sbjct: 7 VTMNEFEYLKLLGKGTFGKVILVKEKATGR---------YYAMKILKKEVIVAKDEVAHT 57
Query: 137 EMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFY 196
E ++L+ HPFL L F+ + C VME+ +GG+L H + FS ARFY
Sbjct: 58 LTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL--FFHLSRERVFSEDRARFY 115
Query: 197 AAEVLVALEYLH-MLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAI 244
AE++ AL+YLH ++YRDLK EN+++ DGHI ++DF LC I
Sbjct: 116 GAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDF--GLCKEGI 162
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 77/144 (53%), Gaps = 10/144 (6%)
Query: 305 SFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT 364
+F GT EY++PEV +G AVDWW G+ +YEM+ GR PF +E I+ + +
Sbjct: 308 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIR 367
Query: 365 FP-TQSPSSMSEYHARDLISGLLNKDPCNRL-GSKRGAADVKTHPFFKGLNFALI--RSL 420
FP T P A+ L+SGLL KDP RL G A ++ H FF G+ + + + L
Sbjct: 368 FPRTLGPE------AKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKL 421
Query: 421 TPPEIPGMRRQKTMPFPDQKIKSQ 444
+PP P + + + D++ +Q
Sbjct: 422 SPPFKPQVTSETDTRYFDEEFTAQ 445
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 80/169 (47%), Gaps = 14/169 (8%)
Query: 77 LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRA 136
+T +F+ + +G G G V L R YAM
Sbjct: 145 VTMNEFEYLKLLGKGTFGKVILVKEKATGR---------YYAMKILKKEVIVAKDEVAHT 195
Query: 137 EMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFY 196
E ++L+ HPFL L F+ + C VME+ +GG+L H + FS ARFY
Sbjct: 196 LTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL--FFHLSRERVFSEDRARFY 253
Query: 197 AAEVLVALEYLH-MLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAI 244
AE++ AL+YLH ++YRDLK EN+++ DGHI ++DF LC I
Sbjct: 254 GAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDF--GLCKEGI 300
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 83/157 (52%), Gaps = 11/157 (7%)
Query: 82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
F+ + IG G G V L K+ + H YAM EK+
Sbjct: 43 FERIKTIGTGSFGRVMLV----KHMETGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
IL+ ++ PFL L F+ ++ +VME+ GGD+ S H + RFS ARFYAA+++
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFS--HLRRIGRFSEPHARFYAAQIV 151
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ EYLH L +IYRDLKPEN+L+ G+I ++DF +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFA 188
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
A+ V R+ GT EY++PE+ + AVDWWA G+ IYEM G PF A
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
IV + FP+ S + +DL+ LL D R G+ K G D+K H +F ++
Sbjct: 248 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
Query: 415 ALI--RSLTPPEIPGMR 429
I R + P IP +
Sbjct: 303 IAIYQRKVEAPFIPKFK 319
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 83/157 (52%), Gaps = 11/157 (7%)
Query: 82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
F+ + IG G G V L K+ + H YAM EK+
Sbjct: 43 FERIKTIGTGSFGRVMLV----KHMETGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
IL+ ++ PFL L F+ ++ +VME+ GGD+ S H + RFS ARFYAA+++
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFS--HLRRIGRFSEPHARFYAAQIV 151
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ EYLH L +IYRDLKPEN+L+ G+I ++DF +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFA 188
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
A+ V R+ GT EY++PE+ + AVDWWA G+ IYEM G PF A
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
IV + FP+ S + +DL+ LL D R G+ K G D+K H +F ++
Sbjct: 248 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
Query: 415 ALI--RSLTPPEIPGMR 429
I R + P IP +
Sbjct: 303 IAIYQRKVEAPFIPKFK 319
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 84/157 (53%), Gaps = 11/157 (7%)
Query: 82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
F+ + +G G G V L K+++ H YAM EK+
Sbjct: 36 FERIKTLGTGSFGRVMLV----KHKETGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 86
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
IL+ ++ PFL L F+ ++ +VME+ GG++ S H + RFS ARFYAA+++
Sbjct: 87 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPHARFYAAQIV 144
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ EYLH L +IYRDLKPEN+L+ G+I ++DF +
Sbjct: 145 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 181
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
A+ V R+ GT EY++PE+ + AVDWWA G+ IYEM G PF A
Sbjct: 181 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 240
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
IV + FP+ S + +DL+ LL D R G+ K G D+K H +F ++
Sbjct: 241 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 295
Query: 415 ALI--RSLTPPEIPGMR 429
I R + P IP +
Sbjct: 296 IAIYQRKVEAPFIPKFK 312
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 84/157 (53%), Gaps = 11/157 (7%)
Query: 82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
F+ + +G G G V L K+++ H YAM EK+
Sbjct: 44 FERIKTLGTGSFGRVMLV----KHKETGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 94
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
IL+ ++ PFL L F+ ++ +VME+ GG++ S H + RFS ARFYAA+++
Sbjct: 95 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPHARFYAAQIV 152
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ EYLH L +IYRDLKPEN+L+ G+I ++DF +
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 189
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
A+ V R+ GT EY++PE+ + AVDWWA G+ IYEM G PF A
Sbjct: 189 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 248
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
IV + FP+ S + +DL+ LL D R G+ K G D+K H +F ++
Sbjct: 249 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 303
Query: 415 ALI--RSLTPPEIPGMR 429
I R + P IP +
Sbjct: 304 IAIYQRKVEAPFIPKFK 320
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 84/157 (53%), Gaps = 11/157 (7%)
Query: 82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
F+ + +G G G V L K+++ H YAM EK+
Sbjct: 44 FERIKTLGTGSFGRVMLV----KHKETGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 94
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
IL+ ++ PFL L F+ ++ +VME+ GG++ S H + RFS ARFYAA+++
Sbjct: 95 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPHARFYAAQIV 152
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ EYLH L +IYRDLKPEN+L+ G+I ++DF +
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 189
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 65/137 (47%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
A+ V R+ GT EY++PE+ + AVDWWA G+ IYEM G PF A
Sbjct: 189 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 248
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
IV + FP+ S + +DL+ LL D R G+ K G D+ H +F ++
Sbjct: 249 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKNGVNDIXNHKWFATTDW 303
Query: 415 ALI--RSLTPPEIPGMR 429
I R + P IP +
Sbjct: 304 IAIYQRKVEAPFIPKFK 320
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 84/157 (53%), Gaps = 11/157 (7%)
Query: 82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
F+ + +G G G V L K+++ H YAM EK+
Sbjct: 44 FERIKTLGTGSFGRVMLV----KHKETGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 94
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
IL+ ++ PFL L F+ ++ +VME+ GG++ S H + RFS ARFYAA+++
Sbjct: 95 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPHARFYAAQIV 152
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ EYLH L +IYRDLKPEN+L+ G+I ++DF +
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 189
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
A+ V R+ GT EY++PE+ + AVDWWA G+ IYEM G PF A
Sbjct: 189 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 248
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
IV + FP+ S + +DL+ LL D R G+ K G D+K H +F ++
Sbjct: 249 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 303
Query: 415 ALI--RSLTPPEIPGMR 429
I R + P IP +
Sbjct: 304 IAIYQRKVEAPFIPKFK 320
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 84/157 (53%), Gaps = 11/157 (7%)
Query: 82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
F+ + +G G G V L K+++ H YAM EK+
Sbjct: 64 FERIKTLGTGSFGRVMLV----KHKETGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 114
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
IL+ ++ PFL L F+ ++ +VME+ GG++ S H + RFS ARFYAA+++
Sbjct: 115 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPHARFYAAQIV 172
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ EYLH L +IYRDLKPEN+L+ G+I ++DF +
Sbjct: 173 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 209
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
A+ V R+ GT EY++PE+ + AVDWWA G+ IYEM G PF A
Sbjct: 209 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 268
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
IV + FP+ S + +DL+ LL D R G+ K G D+K H +F ++
Sbjct: 269 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 323
Query: 415 ALI--RSLTPPEIPGMR 429
I R + P IP +
Sbjct: 324 IAIYQRKVEAPFIPKFK 340
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 84/157 (53%), Gaps = 11/157 (7%)
Query: 82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
F+ + +G G G V L K+ + H YAM EK+
Sbjct: 43 FERIKTLGTGSFGRVMLV----KHMETGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
IL+ ++ PFL L F+ ++ +VME+ +GG++ S H + RFS ARFYAA+++
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPHARFYAAQIV 151
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ EYLH L +IYRDLKPEN+L+ G+I ++DF +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
A+ V R+ GT EY++PE+ + AVDWWA G+ IYEM G PF A
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
IV + FP+ S + +DL+ LL D R G+ K G D+K H +F ++
Sbjct: 248 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDW 302
Query: 415 ALI--RSLTPPEIPGMR 429
I R + P IP +
Sbjct: 303 IAIYQRKVEAPFIPKFK 319
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 83/157 (52%), Gaps = 11/157 (7%)
Query: 82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
F+ + IG G G V L K+ + H YAM EK+
Sbjct: 43 FERIKTIGTGSFGRVMLV----KHMETGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
IL+ ++ PFL L F+ ++ +VME+ GG++ S H + RFS ARFYAA+++
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPHARFYAAQIV 151
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ EYLH L +IYRDLKPEN+L+ G+I ++DF +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFA 188
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
A+ V R+ GT EY++PE+ + AVDWWA G+ IYEM G PF A
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
IV + FP+ S + +DL+ LL D R G+ K G D+K H +F ++
Sbjct: 248 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
Query: 415 ALI--RSLTPPEIPGMR 429
I R + P IP +
Sbjct: 303 IAIYQRKVEAPFIPKFK 319
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 84/157 (53%), Gaps = 11/157 (7%)
Query: 82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
F+ + +G G G V L K+ + H YAM EK+
Sbjct: 43 FERIKTLGTGSFGRVMLV----KHMETGNH-----YAMKILDKQKVVKLKEIEHTLNEKR 93
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
IL+ ++ PFL L F+ ++ +VME+ GG++ S H + RFS ARFYAA+++
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFS--HLRRIGRFSEPHARFYAAQIV 151
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ EYLH L +IYRDLKPEN+++ G+I ++DF L+
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGLA 188
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 67/138 (48%), Gaps = 8/138 (5%)
Query: 295 VAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETT 354
+A+ V R+ GT EY++PE+ + AVDWWA G+ IYEM G PF A
Sbjct: 187 LAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 355 LRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLN 413
IV + FP+ S + +DL+ LL D R G+ K G D+K H +F +
Sbjct: 247 YEKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTD 301
Query: 414 FALI--RSLTPPEIPGMR 429
+ I R + P IP +
Sbjct: 302 WIAIYQRKVEAPFIPKFK 319
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 75/140 (53%), Gaps = 10/140 (7%)
Query: 305 SFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT 364
+F GT EY++PEV +G AVDWW G+ +YEM+ GR PF +E I+ + +
Sbjct: 311 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIR 370
Query: 365 FP-TQSPSSMSEYHARDLISGLLNKDPCNRL-GSKRGAADVKTHPFFKGLNFALI--RSL 420
FP T P A+ L+SGLL KDP RL G A ++ H FF G+ + + + L
Sbjct: 371 FPRTLGPE------AKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKL 424
Query: 421 TPPEIPGMRRQKTMPFPDQK 440
+PP P + + + D++
Sbjct: 425 SPPFKPQVTSETDTRYFDEE 444
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 91/203 (44%), Gaps = 15/203 (7%)
Query: 44 SKSSPENLSLKPHRSSDFAYSAIRSATFGR-KTGLTFRDFDLHRRIGAGDIGTVYLCSLN 102
K E + + SD + + + + K +T +F+ + +G G G V L
Sbjct: 114 KKQEEEEMDFRSGSPSDNSGAEEMEVSLAKPKHRVTMNEFEYLKLLGKGTFGKVILVKEK 173
Query: 103 NKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKKILKMLDHPFLPTLYAEFEASN 162
R YAM E ++L+ HPFL L F+ +
Sbjct: 174 ATGR---------YYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHD 224
Query: 163 FSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLH-MLGIIYRDLKPEN 221
C VME+ +GG+L H + FS ARFY AE++ AL+YLH ++YRDLK EN
Sbjct: 225 RLCFVMEYANGGEL--FFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLEN 282
Query: 222 VLVRSDGHIMLSDFDLSLCSNAI 244
+++ DGHI ++DF LC I
Sbjct: 283 LMLDKDGHIKITDF--GLCKEGI 303
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 84/157 (53%), Gaps = 11/157 (7%)
Query: 82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
F+ + +G G G V L K+++ H +AM EK+
Sbjct: 43 FERIKTLGTGSFGRVMLV----KHKETGNH-----FAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
IL+ ++ PFL L F+ ++ +VME+ GG++ S H + RFS ARFYAA+++
Sbjct: 94 ILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPHARFYAAQIV 151
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ EYLH L +IYRDLKPEN+L+ G+I ++DF +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
A+ V R+ GT EY++PE+ + AVDWWA G+ IYEM G PF A
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
IV + FP+ S + +DL+ LL D R G+ K G D+K H +F ++
Sbjct: 248 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
Query: 415 ALI--RSLTPPEIPGMR 429
I R + P IP +
Sbjct: 303 IAIYQRKVEAPFIPKFK 319
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 84/157 (53%), Gaps = 11/157 (7%)
Query: 82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
F+ + +G G G V L K+ + H YAM EK+
Sbjct: 43 FERIKTLGTGSFGRVMLV----KHMETGNH-----YAMKILDKQKVVKLKEIEHTLNEKR 93
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
IL+ ++ PFL L F+ ++ +VME+ GG++ S H + RFS ARFYAA+++
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFS--HLRRIGRFSEPHARFYAAQIV 151
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ EYLH L +IYRDLKPEN+++ G+I ++DF L+
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGLA 188
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 67/138 (48%), Gaps = 8/138 (5%)
Query: 295 VAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETT 354
+A+ V R+ GT EY++PE+ + AVDWWA G+ IYEM G PF A
Sbjct: 187 LAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 355 LRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLN 413
IV + FP+ S + +DL+ LL D R G+ K G D+K H +F +
Sbjct: 247 YEKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTD 301
Query: 414 FALI--RSLTPPEIPGMR 429
+ I R + P IP +
Sbjct: 302 WIAIYQRKVEAPFIPKFK 319
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 84/157 (53%), Gaps = 11/157 (7%)
Query: 82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
F+ + +G G G V L K+++ H YAM EK+
Sbjct: 44 FERIKTLGTGSFGRVMLV----KHKETGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 94
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
IL+ ++ PFL L F+ ++ +VME+ GG++ S H + RFS ARFYAA+++
Sbjct: 95 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFS--HLRRIGRFSEPHARFYAAQIV 152
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ EYLH L +IYRDLKPEN+++ G+I ++DF +
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFA 189
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
A+ V R+ GT EY++PE+ + AVDWWA G+ IYEM G PF A
Sbjct: 189 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 248
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
IV + FP+ S + +DL+ LL D R G+ K G D+K H +F ++
Sbjct: 249 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 303
Query: 415 ALI--RSLTPPEIPGMR 429
I R + P IP +
Sbjct: 304 IAIYQRKVEAPFIPKFK 320
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 84/157 (53%), Gaps = 11/157 (7%)
Query: 82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
F+ + +G G G V L K+++ H +AM EK+
Sbjct: 43 FERIKTLGTGSFGRVMLV----KHKETGNH-----FAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
IL+ ++ PFL L F+ ++ +VME+ GG++ S H + RFS ARFYAA+++
Sbjct: 94 ILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPHARFYAAQIV 151
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ EYLH L +IYRDLKPEN+L+ G+I ++DF +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
A+ V R+ GT EY++PE+ + AVDWWA G+ IYEM G PF A
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
IV + FP+ S + +DL+ LL D R G+ K G D+K H +F ++
Sbjct: 248 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDW 302
Query: 415 ALI--RSLTPPEIPGMR 429
I R + P IP +
Sbjct: 303 IAIYQRKVEAPFIPKFK 319
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 84/157 (53%), Gaps = 11/157 (7%)
Query: 82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
F+ + +G G G V L K+++ H +AM EK+
Sbjct: 43 FERIKTLGTGSFGRVMLV----KHKETGNH-----FAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
IL+ ++ PFL L F+ ++ +VME+ GG++ S H + RFS ARFYAA+++
Sbjct: 94 ILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPHARFYAAQIV 151
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ EYLH L +IYRDLKPEN+L+ G+I ++DF +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
A+ V R+ GT EY++PE+ + AVDWWA G+ IYEM G PF A
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
IV + FP+ S + +DL+ LL D R G+ K G D+K H +F ++
Sbjct: 248 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDW 302
Query: 415 ALI--RSLTPPEIPGMR 429
I R + P IP +
Sbjct: 303 IAIYQRKVEAPFIPKFK 319
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 83/157 (52%), Gaps = 11/157 (7%)
Query: 82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
F+ + +G G G V L K+ + H YAM EK+
Sbjct: 44 FERIKTLGTGSFGRVMLV----KHMETGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 94
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
IL+ ++ PFL L F+ ++ +VME+ GG++ S H + RFS ARFYAA+++
Sbjct: 95 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPHARFYAAQIV 152
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ EYLH L +IYRDLKPEN+L+ G+I ++DF +
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 189
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 67/137 (48%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
A+ V R+ + GT EY++PE+ + AVDWWA G+ IYEM G PF A
Sbjct: 189 AKRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 248
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
IV + FP+ S + +DL+ LL D R G+ K G D+K H +F ++
Sbjct: 249 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 303
Query: 415 ALI--RSLTPPEIPGMR 429
I R + P IP +
Sbjct: 304 IAIYQRKVEAPFIPKFK 320
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 83/157 (52%), Gaps = 11/157 (7%)
Query: 82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
F+ + +G G G V L K+ + H YAM EK+
Sbjct: 43 FERIKTLGTGSFGRVMLV----KHMETGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
IL+ ++ PFL L F+ ++ +VME+ GG++ S H + RFS ARFYAA+++
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPHARFYAAQIV 151
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ EYLH L +IYRDLKPEN+L+ G+I ++DF +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
A+ V R+ GT EY++PE+ + AVDWWA G+ IYEM G PF A
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
IV + FP+ S + +DL+ LL D R G+ K G D+K H +F ++
Sbjct: 248 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
Query: 415 ALI--RSLTPPEIPGMR 429
I R + P IP +
Sbjct: 303 IAIYQRKVEAPFIPKFK 319
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 83/157 (52%), Gaps = 11/157 (7%)
Query: 82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
F+ + +G G G V L K+ + H YAM EK+
Sbjct: 44 FERIKTLGTGSFGRVMLV----KHMETGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 94
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
IL+ ++ PFL L F+ ++ +VME+ GG++ S H + RFS ARFYAA+++
Sbjct: 95 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPHARFYAAQIV 152
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ EYLH L +IYRDLKPEN+L+ G+I ++DF +
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 189
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
A+ V R+ GT EY++PE+ + AVDWWA G+ IYEM G PF A
Sbjct: 189 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 248
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
IV + FP+ S + +DL+ LL D R G+ K G D+K H +F ++
Sbjct: 249 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 303
Query: 415 ALI--RSLTPPEIPGMR 429
I R + P IP +
Sbjct: 304 IAIYQRKVEAPFIPKFK 320
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 83/157 (52%), Gaps = 11/157 (7%)
Query: 82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
F+ + +G G G V L K+ + H YAM EK+
Sbjct: 43 FERIKTLGTGSFGRVMLV----KHMETGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
IL+ ++ PFL L F+ ++ +VME+ GG++ S H + RFS ARFYAA+++
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPHARFYAAQIV 151
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ EYLH L +IYRDLKPEN+L+ G+I ++DF +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
A+ V R+ GT EY++PE+ + AVDWWA G+ IYEM G PF A
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
IV + FP+ S + +DL+ LL D R G+ K G D+K H +F ++
Sbjct: 248 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDW 302
Query: 415 ALI--RSLTPPEIPGMR 429
I R + P IP +
Sbjct: 303 IAIYQRKVEAPFIPKFK 319
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 83/157 (52%), Gaps = 11/157 (7%)
Query: 82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
F+ + +G G G V L K+ + H YAM EK+
Sbjct: 43 FERIKTLGTGSFGRVMLV----KHMETGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
IL+ ++ PFL L F+ ++ +VME+ GG++ S H + RFS ARFYAA+++
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPHARFYAAQIV 151
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ EYLH L +IYRDLKPEN+L+ G+I ++DF +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
A+ V R+ GT EY++PE+ + AVDWWA G+ IYEM G PF A
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
IV + FP+ S + +DL+ LL D R G+ K G D+K H +F ++
Sbjct: 248 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
Query: 415 ALI--RSLTPPEIPGMR 429
I R + P IP +
Sbjct: 303 IAIYQRKVEAPFIPKFK 319
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 83/157 (52%), Gaps = 11/157 (7%)
Query: 82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
F+ + +G G G V L K+ + H YAM EK+
Sbjct: 29 FERIKTLGTGSFGRVMLV----KHMETGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 79
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
IL+ ++ PFL L F+ ++ +VME+ GG++ S H + RFS ARFYAA+++
Sbjct: 80 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPHARFYAAQIV 137
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ EYLH L +IYRDLKPEN+L+ G+I ++DF +
Sbjct: 138 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 174
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 67/137 (48%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
A+ V R+ + GT EY++PE+ + AVDWWA G+ IYEM G PF A
Sbjct: 174 AKRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 233
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
IV + FP+ S + +DL+ LL D R G+ K G D+K H +F ++
Sbjct: 234 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDW 288
Query: 415 ALI--RSLTPPEIPGMR 429
I R + P IP +
Sbjct: 289 IAIYQRKVEAPFIPKFK 305
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 83/157 (52%), Gaps = 11/157 (7%)
Query: 82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
F+ + +G G G V L K+++ H YAM EK+
Sbjct: 36 FERIKTLGTGSFGRVMLV----KHKETGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 86
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
IL+ ++ PFL L F+ ++ +VME+ GG++ S H + RF ARFYAA+++
Sbjct: 87 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFXEPHARFYAAQIV 144
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ EYLH L +IYRDLKPEN+L+ G+I ++DF +
Sbjct: 145 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 181
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
A+ V R+ GT EY++PE+ + AVDWWA G+ IYEM G PF A
Sbjct: 181 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 240
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
IV + FP+ S + +DL+ LL D R G+ K G D+K H +F ++
Sbjct: 241 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 295
Query: 415 ALI--RSLTPPEIPGMR 429
I R + P IP +
Sbjct: 296 IAIYQRKVEAPFIPKFK 312
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 83/157 (52%), Gaps = 11/157 (7%)
Query: 82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
F+ + +G G G V L K+ + H YAM EK+
Sbjct: 43 FERIKTLGTGSFGRVMLV----KHMETGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
IL+ ++ PFL L F+ ++ +VME+ GG++ S H + RFS ARFYAA+++
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFS--HLRRIGRFSEPHARFYAAQIV 151
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ EYLH L +IYRDLKPEN+++ G+I ++DF +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGFA 188
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
A+ V R+ GT EY++PE+ + AVDWWA G+ IYEM G PF A
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
IV + FP+ S + +DL+ LL D R G+ K G D+K H +F ++
Sbjct: 248 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
Query: 415 ALI--RSLTPPEIPGMR 429
I R + P IP +
Sbjct: 303 IAIYQRKVEAPFIPKFK 319
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 83/157 (52%), Gaps = 11/157 (7%)
Query: 82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
F+ + +G G G V L K+ + H YAM EK+
Sbjct: 44 FERIKTLGTGSFGRVMLV----KHMETGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 94
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
IL+ ++ PFL L F+ ++ +VME+ GG++ S H + RFS ARFYAA+++
Sbjct: 95 ILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFS--HLRRIGRFSEPHARFYAAQIV 152
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ EYLH L +IYRDLKPEN+++ G+I ++DF +
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFA 189
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
A+ V R+ GT EY++PE+ + AVDWWA G+ IYEM G PF A
Sbjct: 189 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 248
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
IV + FP+ S + +DL+ LL D R G+ K G D+K H +F ++
Sbjct: 249 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 303
Query: 415 ALI--RSLTPPEIPGMR 429
I R + P IP +
Sbjct: 304 IAIYQRKVEAPFIPKFK 320
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 83/157 (52%), Gaps = 11/157 (7%)
Query: 82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
F+ + +G G G V L K+ + H YAM EK+
Sbjct: 44 FERIKTLGTGSFGRVMLV----KHMETGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 94
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
IL+ ++ PFL L F+ ++ +VME+ GG++ S H + RFS ARFYAA+++
Sbjct: 95 ILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFS--HLRRIGRFSEPHARFYAAQIV 152
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ EYLH L +IYRDLKPEN+++ G+I ++DF +
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFA 189
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
A+ V R+ GT EY++PE+ + AVDWWA G+ IYEM G PF A
Sbjct: 189 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 248
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
IV + FP+ S + +DL+ LL D R G+ K G D+K H +F ++
Sbjct: 249 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 303
Query: 415 ALI--RSLTPPEIPGMR 429
I R + P IP +
Sbjct: 304 IAIYQRKVEAPFIPKFK 320
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 83/157 (52%), Gaps = 11/157 (7%)
Query: 82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
F+ + +G G G V L K+ + H YAM EK+
Sbjct: 43 FERIKTLGTGSFGRVMLV----KHMETGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
IL+ ++ PFL L F+ ++ +VME+ GG++ S H + RFS ARFYAA+++
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFS--HLRRIGRFSEPHARFYAAQIV 151
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ EYLH L +IYRDLKPEN+++ G+I ++DF +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFA 188
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
A+ V R+ GT EY++PE+ + AVDWWA G+ IYEM G PF A
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
IV + FP+ S + +DL+ LL D R G+ K G D+K H +F ++
Sbjct: 248 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
Query: 415 ALI--RSLTPPEIPGMR 429
I R + P IP +
Sbjct: 303 IAIYQRKVEAPFIPKFK 319
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/321 (27%), Positives = 126/321 (39%), Gaps = 73/321 (22%)
Query: 85 HRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKKILK 144
R +G G G V LC + G E C + + R E ++LK
Sbjct: 37 QRVLGKGSFGEVILCK-----DKITGQE-CAVKVISKRQVKQKTDKESLLR---EVQLLK 87
Query: 145 MLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVAL 204
LDHP + LY FE + +V E +GG+L KRFS A +VL +
Sbjct: 88 QLDHPNIMKLYEFFEDKGYFYLVGEVYTGGEL--FDEIISRKRFSEVDAARIIRQVLSGI 145
Query: 205 EYLHMLGIIYRDLKPENVLVRS---DGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRS 261
Y+H I++RDLKPEN+L+ S D +I + DF LS
Sbjct: 146 TYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLS----------------------- 182
Query: 262 QTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGG 321
F SKK++ +GT Y++PEV G
Sbjct: 183 ---------------THFEASKKMK------------------DKIGTAYYIAPEVLH-G 208
Query: 322 SHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDL 381
++ D W+ G+ +Y ++ G PF + L+ + K TF +SE A+DL
Sbjct: 209 TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSE-SAKDL 267
Query: 382 ISGLLNKDPCNRLGSKRGAAD 402
I +L P R+ S R A D
Sbjct: 268 IRKMLTYVPSMRI-SARDALD 287
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 128/323 (39%), Gaps = 77/323 (23%)
Query: 85 HRRIGAGDIGTVYLCSLNNKYRQDR--GHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKKI 142
R +G G G V LC +D+ G E C + + R E ++
Sbjct: 31 QRVLGKGSFGEVILC-------KDKITGQE-CAVKVISKRQVKQKTDKESLLR---EVQL 79
Query: 143 LKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLV 202
LK LDHP + LY FE + +V E +GG+L KRFS A +VL
Sbjct: 80 LKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGEL--FDEIISRKRFSEVDAARIIRQVLS 137
Query: 203 ALEYLHMLGIIYRDLKPENVLVRS---DGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXX 259
+ Y+H I++RDLKPEN+L+ S D +I + DF LS
Sbjct: 138 GITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLS--------------------- 176
Query: 260 RSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS 319
F SKK++ +GT Y++PEV
Sbjct: 177 -----------------THFEASKKMK------------------DKIGTAYYIAPEVLH 201
Query: 320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHAR 379
G++ D W+ G+ +Y ++ G PF + L+ + K TF +SE A+
Sbjct: 202 -GTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSE-SAK 259
Query: 380 DLISGLLNKDPCNRLGSKRGAAD 402
DLI +L P R+ S R A D
Sbjct: 260 DLIRKMLTYVPSMRI-SARDALD 281
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 83/157 (52%), Gaps = 11/157 (7%)
Query: 82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
F+ R +G G G V L K+++ H YAM EK+
Sbjct: 44 FERIRTLGTGSFGRVMLV----KHKETGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 94
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
I + ++ PFL L F+ ++ +V+E+ GG++ S H + RFS ARFYAA+++
Sbjct: 95 IQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFS--HLRRIGRFSEPHARFYAAQIV 152
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ EYLH L +IYRDLKPEN+L+ G+I ++DF +
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFA 189
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
A+ V R+ GT EY++PE+ + AVDWWA G+ IYEM G PF A
Sbjct: 189 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 248
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
IV + FP+ S + +DL+ LL D R G+ K G D+K H +F ++
Sbjct: 249 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 303
Query: 415 ALI--RSLTPPEIPGMR 429
I R + P IP +
Sbjct: 304 IAIYQRKVEAPFIPKFK 320
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 128/323 (39%), Gaps = 77/323 (23%)
Query: 85 HRRIGAGDIGTVYLCSLNNKYRQDR--GHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKKI 142
R +G G G V LC +D+ G E C + + R E ++
Sbjct: 54 QRVLGKGSFGEVILC-------KDKITGQE-CAVKVISKRQVKQKTDKESLLR---EVQL 102
Query: 143 LKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLV 202
LK LDHP + LY FE + +V E +GG+L KRFS A +VL
Sbjct: 103 LKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGEL--FDEIISRKRFSEVDAARIIRQVLS 160
Query: 203 ALEYLHMLGIIYRDLKPENVLVRS---DGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXX 259
+ Y+H I++RDLKPEN+L+ S D +I + DF LS
Sbjct: 161 GITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLS--------------------- 199
Query: 260 RSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS 319
F SKK++ +GT Y++PEV
Sbjct: 200 -----------------THFEASKKMK------------------DKIGTAYYIAPEVLH 224
Query: 320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHAR 379
G++ D W+ G+ +Y ++ G PF + L+ + K TF +SE A+
Sbjct: 225 -GTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSE-SAK 282
Query: 380 DLISGLLNKDPCNRLGSKRGAAD 402
DLI +L P R+ S R A D
Sbjct: 283 DLIRKMLTYVPSMRI-SARDALD 304
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 128/323 (39%), Gaps = 77/323 (23%)
Query: 85 HRRIGAGDIGTVYLCSLNNKYRQDR--GHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKKI 142
R +G G G V LC +D+ G E C + + R E ++
Sbjct: 55 QRVLGKGSFGEVILC-------KDKITGQE-CAVKVISKRQVKQKTDKESLLR---EVQL 103
Query: 143 LKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLV 202
LK LDHP + LY FE + +V E +GG+L KRFS A +VL
Sbjct: 104 LKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGEL--FDEIISRKRFSEVDAARIIRQVLS 161
Query: 203 ALEYLHMLGIIYRDLKPENVLVRS---DGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXX 259
+ Y+H I++RDLKPEN+L+ S D +I + DF LS
Sbjct: 162 GITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLS--------------------- 200
Query: 260 RSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS 319
F SKK++ +GT Y++PEV
Sbjct: 201 -----------------THFEASKKMK------------------DKIGTAYYIAPEVLH 225
Query: 320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHAR 379
G++ D W+ G+ +Y ++ G PF + L+ + K TF +SE A+
Sbjct: 226 -GTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSE-SAK 283
Query: 380 DLISGLLNKDPCNRLGSKRGAAD 402
DLI +L P R+ S R A D
Sbjct: 284 DLIRKMLTYVPSMRI-SARDALD 305
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 82/157 (52%), Gaps = 11/157 (7%)
Query: 82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
F+ + +G G G V L K+ + H YAM EK+
Sbjct: 44 FERIKTLGTGSFGRVMLV----KHMETGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 94
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
IL+ ++ PFL L F+ ++ +VME+ GG++ S H + RF ARFYAA+++
Sbjct: 95 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFXEPHARFYAAQIV 152
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ EYLH L +IYRDLKPEN+L+ G+I ++DF +
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 189
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
A+ V R+ GT EY++PE+ + AVDWWA G+ IYEM G PF A
Sbjct: 189 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 248
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
IV + FP+ S + +DL+ LL D R G+ K G D+K H +F ++
Sbjct: 249 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 303
Query: 415 ALI--RSLTPPEIPGMR 429
I R + P IP +
Sbjct: 304 IAIYQRKVEAPFIPKFK 320
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 82/157 (52%), Gaps = 11/157 (7%)
Query: 82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
F+ + +G G G V L K+ + H YAM EK+
Sbjct: 43 FERIKTLGTGSFGRVMLV----KHMETGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
IL+ ++ PFL L F+ ++ +VME+ GG++ S H + RF ARFYAA+++
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFXEPHARFYAAQIV 151
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ EYLH L +IYRDLKPEN+L+ G+I ++DF +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
A+ V R+ GT EY++PE+ + AVDWWA G+ IYEM G PF A
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
IV + FP+ S + +DL+ LL D R G+ K G D+K H +F ++
Sbjct: 248 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
Query: 415 ALI--RSLTPPEIPGMR 429
I R + P IP +
Sbjct: 303 IAIYQRKVEAPFIPKFK 319
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 82/157 (52%), Gaps = 11/157 (7%)
Query: 82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
F+ + +G G G V L K+ + H YAM EK+
Sbjct: 43 FERIKTLGTGSFGRVMLV----KHMETGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
IL+ ++ PFL L F+ ++ +VME+ GG++ S H + RF ARFYAA+++
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFXEPHARFYAAQIV 151
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ EYLH L +IYRDLKPEN+L+ G+I ++DF +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
A+ V R+ GT EY++PE+ + AVDWWA G+ IYEM G PF A
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
IV + FP+ S + +DL+ LL D R G+ K G D+K H +F ++
Sbjct: 248 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
Query: 415 ALI--RSLTPPEIPGMR 429
I R + P IP +
Sbjct: 303 IAIYQRKVEAPFIPKFK 319
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 136/336 (40%), Gaps = 78/336 (23%)
Query: 76 GLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHR 135
G DF + +G G VY R + H + A+ R
Sbjct: 7 GEKIEDFKVGNLLGKGSFAGVY--------RAESIHTGLEV-AIKMIDKKAMYKAGMVQR 57
Query: 136 AEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARF 195
+ E KI L HP + LY FE SN+ +V+E C G+++ K K FS AR
Sbjct: 58 VQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYL-KNRVKPFSENEARH 116
Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXX 255
+ +++ + YLH GI++RDL N+L+ + +I ++DF L
Sbjct: 117 FMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGL------------------ 158
Query: 256 XXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTL--TPNRLFVAEPVAARSCSFVGTHEYV 313
+T+L +K TL TPN +++ +A RS
Sbjct: 159 -------------ATQLK------MPHEKHYTLCGTPN--YISPEIATRS---------- 187
Query: 314 SPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSM 373
+HG D W+ G Y ++ GR PF + T++N + K + + PS +
Sbjct: 188 --------AHGLESDVWSLGCMFYTLLIGRPPF----DTDTVKNTLNKVVLADYEMPSFL 235
Query: 374 SEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFF 409
S A+DLI LL ++P +RL + V HPF
Sbjct: 236 S-IEAKDLIHQLLRRNPADRL----SLSSVLDHPFM 266
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 82/157 (52%), Gaps = 11/157 (7%)
Query: 82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
F+ + +G G G V L K+ + H YAM EK+
Sbjct: 44 FERIKTLGTGSFGRVMLV----KHMETGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 94
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
IL+ ++ PFL L F+ ++ +VME+ GG++ S H + RF ARFYAA+++
Sbjct: 95 ILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFS--HLRRIGRFXEPHARFYAAQIV 152
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ EYLH L +IYRDLKPEN+++ G+I ++DF +
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFA 189
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
A+ V R+ GT EY++PE+ + AVDWWA G+ IYEM G PF A
Sbjct: 189 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 248
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
IV + FP+ S + +DL+ LL D R G+ K G D+K H +F ++
Sbjct: 249 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 303
Query: 415 ALI--RSLTPPEIPGMR 429
I R + P IP +
Sbjct: 304 IAIYQRKVEAPFIPKFK 320
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 82/157 (52%), Gaps = 11/157 (7%)
Query: 82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
F+ + +G G G V L K+ + H YAM EK+
Sbjct: 43 FERIKTLGTGSFGRVMLV----KHMETGNH-----YAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
IL+ ++ PFL L F+ ++ +VME+ GG++ S H + RF ARFYAA+++
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFS--HLRRIGRFXEPHARFYAAQIV 151
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ EYLH L +IYRDLKPEN+++ G+I ++DF +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFA 188
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 296 AEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
A+ V R+ GT EY++PE+ + AVDWWA G+ IYEM G PF A
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 356 RNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGS-KRGAADVKTHPFFKGLNF 414
IV + FP+ S + +DL+ LL D R G+ K G D+K H +F ++
Sbjct: 248 EKIVSGKVRFPSHFSSDL-----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
Query: 415 ALI--RSLTPPEIPGMR 429
I R + P IP +
Sbjct: 303 IAIYQRKVEAPFIPKFK 319
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 116/275 (42%), Gaps = 70/275 (25%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVM--EFCSGGDLHSLRHKQPHKRFSLTSARFY 196
E ILK LDHP + L + N + M E + G + + +P S ARFY
Sbjct: 86 EIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKP---LSEDQARFY 142
Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXX 256
+++ +EYLH II+RD+KP N+LV DGHI ++DF +S
Sbjct: 143 FQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVS------------------ 184
Query: 257 XXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE 316
N F GS + + T VGT +++PE
Sbjct: 185 --------------------NEFKGSDALLSNT-----------------VGTPAFMAPE 207
Query: 317 VASGGSH---GNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSM 373
S G A+D WA G+ +Y ++G+ PF I + L FP Q P
Sbjct: 208 SLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQALEFPDQ-PDIA 266
Query: 374 SEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPF 408
+ +DLI+ +L+K+P +R+ ++K HP+
Sbjct: 267 EDL--KDLITRMLDKNPESRI----VVPEIKLHPW 295
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 82/169 (48%), Gaps = 11/169 (6%)
Query: 70 TFGRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXX 129
F + F F++ R IG G G V + N+ + +YAM
Sbjct: 5 VFDENEDVNFDHFEILRAIGKGSFGKVCIVQKNDTKK---------MYAMKYMNKQKCVE 55
Query: 130 XXXXHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFS 189
E +I++ L+HPFL L+ F+ +V++ GGDL H Q + F
Sbjct: 56 RNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRY--HLQQNVHFK 113
Query: 190 LTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ + + E+++AL+YL II+RD+KP+N+L+ GH+ ++DF+++
Sbjct: 114 EETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIA 162
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 67/143 (46%), Gaps = 10/143 (6%)
Query: 298 PVAARSCSFVGTHEYVSPEVAS---GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETT 354
P + + GT Y++PE+ S G + AVDWW+ G+ YE++ GR P+ S+ T+
Sbjct: 166 PRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSS-TS 224
Query: 355 LRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNF 414
+ IV T PS+ S+ L+ LL +P R +DV+ P+ +N+
Sbjct: 225 SKEIVHTFETTVVTYPSAWSQ-EMVSLLKKLLEPNPDQRFSQ---LSDVQNFPYMNDINW 280
Query: 415 ALI--RSLTPPEIPGMRRQKTMP 435
+ + L P IP R P
Sbjct: 281 DAVFQKRLIPGFIPNKGRLNCDP 303
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 71/124 (57%), Gaps = 8/124 (6%)
Query: 306 FVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTF 365
F GT +Y++PE+ + +G +VDWWAFG+ +YEM+ G+ PF + ++I++ + +
Sbjct: 181 FCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAY 240
Query: 366 PTQSPSSMSEYHARDLISGLLNKDPCNRLG-SKRGAADVKTHPFFKGLNFALI--RSLTP 422
P SMS+ A + GL+ K P RLG G D+K H FF+ +++ + + + P
Sbjct: 241 ----PKSMSK-EAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEIQP 295
Query: 423 PEIP 426
P P
Sbjct: 296 PYKP 299
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 86/174 (49%), Gaps = 14/174 (8%)
Query: 72 GRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXX 131
G + + DF+ +G G G V L + +G + LYA+
Sbjct: 12 GNRDRMKLTDFNFLMVLGKGSFGKVMLS-------ERKGTDE--LYAVKILKKDVVIQDD 62
Query: 132 XXHRAEMEKKILKMLDHP-FLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSL 190
+EK++L + P FL L++ F+ + VME+ +GGDL + H Q RF
Sbjct: 63 DVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDL--MYHIQQVGRFKE 120
Query: 191 TSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAI 244
A FYAAE+ + L +L GIIYRDLK +NV++ S+GHI ++DF +C I
Sbjct: 121 PHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADF--GMCKENI 172
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 71/124 (57%), Gaps = 8/124 (6%)
Query: 306 FVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTF 365
F GT +Y++PE+ + +G +VDWWAFG+ +YEM+ G+ PF + ++I++ + +
Sbjct: 502 FCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAY 561
Query: 366 PTQSPSSMSEYHARDLISGLLNKDPCNRLG-SKRGAADVKTHPFFKGLNFALI--RSLTP 422
P SMS+ A + GL+ K P RLG G D+K H FF+ +++ + + + P
Sbjct: 562 ----PKSMSK-EAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEIQP 616
Query: 423 PEIP 426
P P
Sbjct: 617 PYKP 620
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 86/174 (49%), Gaps = 14/174 (8%)
Query: 72 GRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXX 131
G + + DF+ +G G G V L + +G + LYA+
Sbjct: 333 GNRDRMKLTDFNFLMVLGKGSFGKVML-------SERKGTDE--LYAVKILKKDVVIQDD 383
Query: 132 XXHRAEMEKKILKMLDHP-FLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSL 190
+EK++L + P FL L++ F+ + VME+ +GGDL + H Q RF
Sbjct: 384 DVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDL--MYHIQQVGRFKE 441
Query: 191 TSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAI 244
A FYAAE+ + L +L GIIYRDLK +NV++ S+GHI ++DF +C I
Sbjct: 442 PHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADF--GMCKENI 493
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 112/266 (42%), Gaps = 65/266 (24%)
Query: 135 RAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKR-FSLTSA 193
R + E +I+K LDHP + LY FE + +VME C+GG+L + HKR F + A
Sbjct: 52 RFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELF---ERVVHKRVFRESDA 108
Query: 194 RFYAAEVLVALEYLHMLGIIYRDLKPENVLVRS---DGHIMLSDFDLSLCSNAIXXXXXX 250
+VL A+ Y H L + +RDLKPEN L + D + L DF L+
Sbjct: 109 ARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLA------------ 156
Query: 251 XXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTH 310
RF K ++T +V+
Sbjct: 157 --------------------------ARFKPGKMMRTKVGTPYYVS-------------- 176
Query: 311 EYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSP 370
P+V G +G D W+ G+ +Y ++ G PF+AP++ + I + TFP +
Sbjct: 177 ----PQVLE-GLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDW 231
Query: 371 SSMSEYHARDLISGLLNKDPCNRLGS 396
++S A LI LL K P R+ S
Sbjct: 232 LNVSP-QAESLIRRLLTKSPKQRITS 256
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 112/266 (42%), Gaps = 65/266 (24%)
Query: 135 RAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKR-FSLTSA 193
R + E +I+K LDHP + LY FE + +VME C+GG+L + HKR F + A
Sbjct: 69 RFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELF---ERVVHKRVFRESDA 125
Query: 194 RFYAAEVLVALEYLHMLGIIYRDLKPENVLVRS---DGHIMLSDFDLSLCSNAIXXXXXX 250
+VL A+ Y H L + +RDLKPEN L + D + L DF L+
Sbjct: 126 ARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLA------------ 173
Query: 251 XXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTH 310
RF K ++T +V+
Sbjct: 174 --------------------------ARFKPGKMMRTKVGTPYYVS-------------- 193
Query: 311 EYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSP 370
P+V G +G D W+ G+ +Y ++ G PF+AP++ + I + TFP +
Sbjct: 194 ----PQVLE-GLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDW 248
Query: 371 SSMSEYHARDLISGLLNKDPCNRLGS 396
++S A LI LL K P R+ S
Sbjct: 249 LNVSP-QAESLIRRLLTKSPKQRITS 273
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 117/289 (40%), Gaps = 68/289 (23%)
Query: 137 EMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFY 196
E E +LK + H + TL +E++ +VM+ SGG+L ++ A
Sbjct: 54 ENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGEL--FDRILERGVYTEKDASLV 111
Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLV---RSDGHIMLSDFDLSLCSNAIXXXXXXXXX 253
+VL A++YLH GI++RDLKPEN+L + IM++D
Sbjct: 112 IQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITD------------------- 152
Query: 254 XXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYV 313
FG K++ + + +C GT YV
Sbjct: 153 --------------------------FGLSKME---------QNGIMSTAC---GTPGYV 174
Query: 314 SPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSM 373
+PEV + + AVD W+ G+ Y ++ G PF + I + F + +
Sbjct: 175 APEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDI 234
Query: 374 SEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTP 422
SE A+D I LL KDP R ++ +HP+ G N AL R + P
Sbjct: 235 SE-SAKDFICHLLEKDPNERYTCEKAL----SHPWIDG-NTALHRDIYP 277
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 68/128 (53%), Gaps = 13/128 (10%)
Query: 307 VGTHEYVSPEV----ASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIV--K 360
VGT +Y+SPEV G +G DWW+ G+F++EM+ G TPF A S T I+ K
Sbjct: 236 VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHK 295
Query: 361 KPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG--LNFALIR 418
L FP + S HA++LI L D RLG + G ++K HPFFK N+ IR
Sbjct: 296 NSLCFPEDAEISK---HAKNLICAFLT-DREVRLG-RNGVEEIKQHPFFKNDQWNWDNIR 350
Query: 419 SLTPPEIP 426
P +P
Sbjct: 351 ETAAPVVP 358
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 81/165 (49%), Gaps = 16/165 (9%)
Query: 73 RKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXX 132
R + D+D+ + IG G G V L R +YAM
Sbjct: 68 RGLQMKAEDYDVVKVIGRGAFGEVQLV---------RHKASQKVYAMKLLSKFEMIKRSD 118
Query: 133 XHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSL--RHKQPHKRFSL 190
E+ I+ + P++ L+ F+ + +VME+ GGDL +L + P K
Sbjct: 119 SAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKW--- 175
Query: 191 TSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDF 235
A+FY AEV++AL+ +H +G+I+RD+KP+N+L+ GH+ L+DF
Sbjct: 176 --AKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADF 218
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 115/278 (41%), Gaps = 66/278 (23%)
Query: 137 EMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFY 196
E E +L+ + H + L +E+ N +VM+ SGG+L ++ ++ A
Sbjct: 68 ENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGF--YTEKDASTL 125
Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLVRS---DGHIMLSDFDLSLCSNAIXXXXXXXXX 253
+VL A+ YLH +GI++RDLKPEN+L S + IM+SD
Sbjct: 126 IRQVLDAVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISD------------------- 166
Query: 254 XXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYV 313
FG K++ V + +C GT YV
Sbjct: 167 --------------------------FGLSKMEG--------KGDVMSTAC---GTPGYV 189
Query: 314 SPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSM 373
+PEV + + AVD W+ G+ Y ++ G PF ++ I+K F + +
Sbjct: 190 APEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDI 249
Query: 374 SEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG 411
S+ A+D I L+ KDP R ++ A HP+ G
Sbjct: 250 SD-SAKDFIRNLMEKDPNKRYTCEQAA----RHPWIAG 282
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 122/323 (37%), Gaps = 77/323 (23%)
Query: 85 HRRIGAGDIGTVYLCSLNNKYRQDR--GHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKKI 142
R +G G G V LC +D+ G E C + + R E ++
Sbjct: 31 QRVLGKGSFGEVILC-------KDKITGQE-CAVKVISKRQVKQKTDKESLLR---EVQL 79
Query: 143 LKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLV 202
LK LDHP + LY FE + +V E +GG+L KRFS A +VL
Sbjct: 80 LKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGEL--FDEIISRKRFSEVDAARIIRQVLS 137
Query: 203 ALEYLHMLGIIYRDLKPENVLVRS---DGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXX 259
+ Y H I++RDLKPEN+L+ S D +I + DF LS
Sbjct: 138 GITYXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLS--------------------- 176
Query: 260 RSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS 319
F SKK + ++A PEV
Sbjct: 177 -----------------THFEASKKXKDKIGTAYYIA------------------PEVLH 201
Query: 320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHAR 379
G++ D W+ G+ +Y ++ G PF + L+ + K TF +SE A+
Sbjct: 202 -GTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSE-SAK 259
Query: 380 DLISGLLNKDPCNRLGSKRGAAD 402
DLI L P R+ S R A D
Sbjct: 260 DLIRKXLTYVPSXRI-SARDALD 281
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 113/278 (40%), Gaps = 69/278 (24%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDL-HSLRHKQPHKRFSLTSARFYA 197
E +LK+LDHP + LY FE +VME GG+L + H+ +F+ A
Sbjct: 86 EVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRM---KFNEVDAAVII 142
Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRS---DGHIMLSDFDLSLCSNAIXXXXXXXXXX 254
+VL + YLH I++RDLKPEN+L+ S D I + DF LS
Sbjct: 143 KQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAV-------------- 188
Query: 255 XXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVS 314
F KK++ ++A
Sbjct: 189 ------------------------FENQKKMKERLGTAYYIA------------------ 206
Query: 315 PEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMS 374
PEV + D W+ G+ ++ ++ G PF +++ LR + K TF + ++S
Sbjct: 207 PEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVS 265
Query: 375 EYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGL 412
E A+DLI +L D R+ +++ HP+ K +
Sbjct: 266 E-GAKDLIKQMLQFDSQRRISAQQAL----EHPWIKEM 298
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 115/278 (41%), Gaps = 66/278 (23%)
Query: 137 EMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFY 196
E E +L + HP + L +E+ ++M+ SGG+L ++ ++ A
Sbjct: 64 ENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGF--YTERDASRL 121
Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLVRS---DGHIMLSDFDLSLCSNAIXXXXXXXXX 253
+VL A++YLH LGI++RDLKPEN+L S D IM+SD
Sbjct: 122 IFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISD------------------- 162
Query: 254 XXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYV 313
FG K++ P V + +C GT YV
Sbjct: 163 --------------------------FGLSKMED--PGS------VLSTAC---GTPGYV 185
Query: 314 SPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSM 373
+PEV + + AVD W+ G+ Y ++ G PF ++ I+K F + +
Sbjct: 186 APEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDI 245
Query: 374 SEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG 411
S+ A+D I L+ KDP R ++ HP+ G
Sbjct: 246 SD-SAKDFIRHLMEKDPEKRFTCEQAL----QHPWIAG 278
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 115/278 (41%), Gaps = 66/278 (23%)
Query: 137 EMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFY 196
E E +L + HP + L +E+ ++M+ SGG+L ++ ++ A
Sbjct: 64 ENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGF--YTERDASRL 121
Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLVRS---DGHIMLSDFDLSLCSNAIXXXXXXXXX 253
+VL A++YLH LGI++RDLKPEN+L S D IM+SD
Sbjct: 122 IFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISD------------------- 162
Query: 254 XXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYV 313
FG K++ P V + +C GT YV
Sbjct: 163 --------------------------FGLSKMED--PG------SVLSTAC---GTPGYV 185
Query: 314 SPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSM 373
+PEV + + AVD W+ G+ Y ++ G PF ++ I+K F + +
Sbjct: 186 APEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDI 245
Query: 374 SEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG 411
S+ A+D I L+ KDP R ++ HP+ G
Sbjct: 246 SD-SAKDFIRHLMEKDPEKRFTCEQAL----QHPWIAG 278
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 115/278 (41%), Gaps = 66/278 (23%)
Query: 137 EMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFY 196
E E +L + HP + L +E+ ++M+ SGG+L ++ ++ A
Sbjct: 64 ENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGF--YTERDASRL 121
Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLVRS---DGHIMLSDFDLSLCSNAIXXXXXXXXX 253
+VL A++YLH LGI++RDLKPEN+L S D IM+SD
Sbjct: 122 IFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISD------------------- 162
Query: 254 XXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYV 313
FG K++ P V + +C GT YV
Sbjct: 163 --------------------------FGLSKMED--PG------SVLSTAC---GTPGYV 185
Query: 314 SPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSM 373
+PEV + + AVD W+ G+ Y ++ G PF ++ I+K F + +
Sbjct: 186 APEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDI 245
Query: 374 SEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG 411
S+ A+D I L+ KDP R ++ HP+ G
Sbjct: 246 SD-SAKDFIRHLMEKDPEKRFTCEQAL----QHPWIAG 278
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 115/278 (41%), Gaps = 66/278 (23%)
Query: 137 EMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFY 196
E E +L + HP + L +E+ ++M+ SGG+L ++ ++ A
Sbjct: 64 ENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGF--YTERDASRL 121
Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLVRS---DGHIMLSDFDLSLCSNAIXXXXXXXXX 253
+VL A++YLH LGI++RDLKPEN+L S D IM+SD
Sbjct: 122 IFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISD------------------- 162
Query: 254 XXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYV 313
FG K++ P V + +C GT YV
Sbjct: 163 --------------------------FGLSKMED--PGS------VLSTAC---GTPGYV 185
Query: 314 SPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSM 373
+PEV + + AVD W+ G+ Y ++ G PF ++ I+K F + +
Sbjct: 186 APEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDI 245
Query: 374 SEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG 411
S+ A+D I L+ KDP R ++ HP+ G
Sbjct: 246 SD-SAKDFIRHLMEKDPEKRFTCEQAL----QHPWIAG 278
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 70/136 (51%), Gaps = 13/136 (9%)
Query: 301 ARSCSFVGTHEYVSPEV----ASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLR 356
R + VGT +Y+SPEV G +G DWW+ G+F+YEM+ G TPF A S T
Sbjct: 229 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYS 288
Query: 357 NIV--KKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNF 414
I+ K LTFP + S A++LI L D RLG + G ++K H FFK +
Sbjct: 289 KIMNHKNSLTFPDDNDISK---EAKNLICAFLT-DREVRLG-RNGVEEIKRHLFFKNDQW 343
Query: 415 AL--IRSLTPPEIPGM 428
A +R P +P +
Sbjct: 344 AWETLRDTVAPVVPDL 359
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 80/165 (48%), Gaps = 16/165 (9%)
Query: 73 RKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXX 132
R + D+++ + IG G G V L R +YAM
Sbjct: 67 RDLRMKAEDYEVVKVIGRGAFGEVQLV---------RHKSTRKVYAMKLLSKFEMIKRSD 117
Query: 133 XHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSL--RHKQPHKRFSL 190
E+ I+ + P++ L+ F+ + +VME+ GGDL +L + P K
Sbjct: 118 SAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKW--- 174
Query: 191 TSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDF 235
ARFY AEV++AL+ +H +G I+RD+KP+N+L+ GH+ L+DF
Sbjct: 175 --ARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADF 217
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 70/136 (51%), Gaps = 13/136 (9%)
Query: 301 ARSCSFVGTHEYVSPEV----ASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLR 356
R + VGT +Y+SPEV G +G DWW+ G+F+YEM+ G TPF A S T
Sbjct: 229 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYS 288
Query: 357 NIV--KKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNF 414
I+ K LTFP + S A++LI L D RLG + G ++K H FFK +
Sbjct: 289 KIMNHKNSLTFPDDNDISK---EAKNLICAFLT-DREVRLG-RNGVEEIKRHLFFKNDQW 343
Query: 415 AL--IRSLTPPEIPGM 428
A +R P +P +
Sbjct: 344 AWETLRDTVAPVVPDL 359
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 80/165 (48%), Gaps = 16/165 (9%)
Query: 73 RKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXX 132
R + D+++ + IG G G V L R +YAM
Sbjct: 67 RDLRMKAEDYEVVKVIGRGAFGEVQLV---------RHKSTRKVYAMKLLSKFEMIKRSD 117
Query: 133 XHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSL--RHKQPHKRFSL 190
E+ I+ + P++ L+ F+ + +VME+ GGDL +L + P K
Sbjct: 118 SAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKW--- 174
Query: 191 TSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDF 235
ARFY AEV++AL+ +H +G I+RD+KP+N+L+ GH+ L+DF
Sbjct: 175 --ARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADF 217
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 119/341 (34%), Gaps = 77/341 (22%)
Query: 71 FGRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXX 130
G K T DFD+ R +G G G VYL R + + A+
Sbjct: 3 LGSKRQWTLEDFDIGRPLGKGKFGNVYLA---------RERQSKFILALKVLFKTQLEKA 53
Query: 131 XXXHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSL 190
H+ E +I L HP + LY F + +++E+
Sbjct: 54 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP------------------ 95
Query: 191 TSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXX 250
LG +YR+L+ LS FD + I
Sbjct: 96 -------------------LGTVYRELQK------------LSRFDEQRTATYITELANA 124
Query: 251 XXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTH 310
S ++++ R + N GS + V P ++R + GT
Sbjct: 125 L---------SYCHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAP-SSRRTTLCGTL 174
Query: 311 EYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSP 370
+Y+ PE+ G H VD W+ G+ YE + G PF A + + T R I + TFP
Sbjct: 175 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPDFVT 234
Query: 371 SSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG 411
ARDLIS LL + RL A+V HP+ K
Sbjct: 235 EG-----ARDLISRLLKHNASQRL----TLAEVLEHPWIKA 266
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 70/136 (51%), Gaps = 13/136 (9%)
Query: 301 ARSCSFVGTHEYVSPEV----ASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLR 356
R + VGT +Y+SPEV G +G DWW+ G+F+YEM+ G TPF A S T
Sbjct: 224 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYS 283
Query: 357 NIV--KKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNF 414
I+ K LTFP + S A++LI L D RLG + G ++K H FFK +
Sbjct: 284 KIMNHKNSLTFPDDNDISK---EAKNLICAFLT-DREVRLG-RNGVEEIKRHLFFKNDQW 338
Query: 415 AL--IRSLTPPEIPGM 428
A +R P +P +
Sbjct: 339 AWETLRDTVAPVVPDL 354
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 80/165 (48%), Gaps = 16/165 (9%)
Query: 73 RKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXX 132
R + D+++ + IG G G V L R +YAM
Sbjct: 62 RDLRMKAEDYEVVKVIGRGAFGEVQLV---------RHKSTRKVYAMKLLSKFEMIKRSD 112
Query: 133 XHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSL--RHKQPHKRFSL 190
E+ I+ + P++ L+ F+ + +VME+ GGDL +L + P K
Sbjct: 113 SAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKW--- 169
Query: 191 TSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDF 235
ARFY AEV++AL+ +H +G I+RD+KP+N+L+ GH+ L+DF
Sbjct: 170 --ARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADF 212
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/371 (22%), Positives = 132/371 (35%), Gaps = 81/371 (21%)
Query: 74 KTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXX 133
K G + +D+ +G+G G V+ C R +
Sbjct: 45 KQGSVYDYYDILEELGSGAFGVVHRCVEKATGR------------VFVAKFINTPYPLDK 92
Query: 134 HRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSA 193
+ + E I+ L HP L L+ FE +++EF SGG+L + +K S
Sbjct: 93 YTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYK-MSEAEV 151
Query: 194 RFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXX 253
Y + L+++H I++ D+KPEN++ + + D L +
Sbjct: 152 INYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATK----------- 200
Query: 254 XXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYV 313
L P+ + T E+
Sbjct: 201 ----------------------------------LNPDEIVKVT---------TATAEFA 217
Query: 314 SPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSM 373
+PE+ G D WA G+ Y ++ G +PFA + TL+N+ + F + SS+
Sbjct: 218 APEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSV 277
Query: 374 SEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEIPGMRRQKT 433
S A+D I LL K+P RL D HP+ KG + L IP R K
Sbjct: 278 SP-EAKDFIKNLLQKEPRKRL----TVHDALEHPWLKGDHSNLTS-----RIPSSRYNKI 327
Query: 434 MPFPDQKIKSQ 444
QKIK +
Sbjct: 328 R----QKIKEK 334
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 119/341 (34%), Gaps = 77/341 (22%)
Query: 71 FGRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXX 130
G K T DFD+ R +G G G VYL R + + A+
Sbjct: 3 LGSKRQWTLEDFDIGRPLGKGKFGNVYLA---------RERQSKFILALKVLFKTQLEKA 53
Query: 131 XXXHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSL 190
H+ E +I L HP + LY F + +++E+
Sbjct: 54 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP------------------ 95
Query: 191 TSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXX 250
LG +YR+L+ LS FD + I
Sbjct: 96 -------------------LGTVYRELQK------------LSRFDEQRTATYITELANA 124
Query: 251 XXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTH 310
S ++++ R + N GS + V P ++R + GT
Sbjct: 125 L---------SYCHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAP-SSRRDTLCGTL 174
Query: 311 EYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSP 370
+Y+ PE+ G H VD W+ G+ YE + G PF A + + T R I + TFP
Sbjct: 175 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPDFVT 234
Query: 371 SSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG 411
ARDLIS LL + RL A+V HP+ K
Sbjct: 235 EG-----ARDLISRLLKHNASQRL----TLAEVLEHPWIKA 266
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 107/258 (41%), Gaps = 65/258 (25%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E +L + HP + FE + IVM++C GGDL + Q F +
Sbjct: 73 EVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFV 132
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
++ +AL+++H I++RD+K +N+ + DG + L DF ++ N+
Sbjct: 133 QICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNS--------------- 177
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
+ L+R +C +GT Y+SPE+
Sbjct: 178 ----------TVELAR----------------------------AC--IGTPYYLSPEIC 197
Query: 319 SGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPL--TFPTQSPSSMS-E 375
+ N D WA G +YE+ + F A S ++N+V K + +FP P S+
Sbjct: 198 ENKPYNNKSDIWALGCVLYELCTLKHAFEAGS----MKNLVLKIISGSFP---PVSLHYS 250
Query: 376 YHARDLISGLLNKDPCNR 393
Y R L+S L ++P +R
Sbjct: 251 YDLRSLVSQLFKRNPRDR 268
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 60/122 (49%), Gaps = 13/122 (10%)
Query: 302 RSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKK 361
R + GT +Y+ PE+ G H VD W G+ YE++ G PF + S+ T R IVK
Sbjct: 177 RRKTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKV 236
Query: 362 PLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLT 421
L FP P+ A+DLIS LL +P RL A V HP+ + A R +
Sbjct: 237 DLKFPASVPTG-----AQDLISKLLRHNPSERL----PLAQVSAHPWVR----ANSRRVL 283
Query: 422 PP 423
PP
Sbjct: 284 PP 285
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 71/162 (43%), Gaps = 11/162 (6%)
Query: 78 TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAE 137
T DF++ R +G G G VYL R+ + H + A+ H+
Sbjct: 21 TIDDFEIGRPLGKGKFGNVYLA------REKKSH---FIVALKVLFKSQIEKEGVEHQLR 71
Query: 138 MEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYA 197
E +I L HP + LY F +++E+ G+L+ + Q F
Sbjct: 72 REIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELY--KELQKSCTFDEQRTATIM 129
Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL 239
E+ AL Y H +I+RD+KPEN+L+ G + ++DF S+
Sbjct: 130 EELADALMYCHGKKVIHRDIKPENLLLGLKGELKIADFGWSV 171
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 118/280 (42%), Gaps = 67/280 (23%)
Query: 136 AEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARF 195
E E +ILK L+HP + + F+A ++ IV+E GG+L +KR + +
Sbjct: 61 VETEIEILKKLNHPCIIKIKNFFDAEDYY-IVLELMEGGELFD--KVVGNKRLKEATCKL 117
Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLVRS---DGHIMLSDFDLSLCSNAIXXXXXXXX 252
Y ++L+A++YLH GII+RDLKPENVL+ S D I ++DF S
Sbjct: 118 YFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHS-------------- 163
Query: 253 XXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKI-QTLTPNRLFVAEPVAARSCSFVGTHE 311
+ G + +TL ++A V VGT
Sbjct: 164 -------------------------KILGETSLMRTLCGTPTYLAPEVLVS----VGTAG 194
Query: 312 YVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRN-IVKKPLTFPTQSP 370
Y AVD W+ G+ ++ + G PF+ + +L++ I F +
Sbjct: 195 Y-----------NRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVW 243
Query: 371 SSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
+ +SE A DL+ LL DP R ++ HP+ +
Sbjct: 244 AEVSE-KALDLVKKLLVVDPKARFTTEEAL----RHPWLQ 278
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 107/272 (39%), Gaps = 64/272 (23%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E I++ H + +Y+ + + +VMEF GG L + H R +
Sbjct: 92 EVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDI---VTHTRMNEEQIATVCL 148
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
VL AL YLH G+I+RD+K +++L+ SDG I LSDF C+
Sbjct: 149 SVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDF--GFCAQV--------------- 191
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
SK++ P R VGT +++PEV
Sbjct: 192 -----------------------SKEV----PKR-----------KXLVGTPYWMAPEVI 213
Query: 319 SGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHA 378
S +G VD W+ GI + EMI G P+ NE L+ + + + P P +
Sbjct: 214 SRLPYGTEVDIWSLGIMVIEMIDGEPPYF---NEPPLQAMRRIRDSLP---PRVKDLHKV 267
Query: 379 RDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
++ G L+ + A ++ HPF K
Sbjct: 268 SSVLRGFLDLMLVREPSQRATAQELLGHPFLK 299
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 118/280 (42%), Gaps = 67/280 (23%)
Query: 136 AEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARF 195
E E +ILK L+HP + + F+A ++ IV+E GG+L +KR + +
Sbjct: 62 VETEIEILKKLNHPCIIKIKNFFDAEDYY-IVLELMEGGELFD--KVVGNKRLKEATCKL 118
Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLVRS---DGHIMLSDFDLSLCSNAIXXXXXXXX 252
Y ++L+A++YLH GII+RDLKPENVL+ S D I ++DF S
Sbjct: 119 YFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHS-------------- 164
Query: 253 XXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKI-QTLTPNRLFVAEPVAARSCSFVGTHE 311
+ G + +TL ++A V VGT
Sbjct: 165 -------------------------KILGETSLMRTLCGTPTYLAPEVLVS----VGTAG 195
Query: 312 YVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRN-IVKKPLTFPTQSP 370
Y AVD W+ G+ ++ + G PF+ + +L++ I F +
Sbjct: 196 Y-----------NRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVW 244
Query: 371 SSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
+ +SE A DL+ LL DP R ++ HP+ +
Sbjct: 245 AEVSE-KALDLVKKLLVVDPKARFTTEEAL----RHPWLQ 279
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 118/280 (42%), Gaps = 67/280 (23%)
Query: 136 AEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARF 195
E E +ILK L+HP + + F+A ++ IV+E GG+L +KR + +
Sbjct: 62 VETEIEILKKLNHPCIIKIKNFFDAEDYY-IVLELMEGGELFD--KVVGNKRLKEATCKL 118
Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLVRS---DGHIMLSDFDLSLCSNAIXXXXXXXX 252
Y ++L+A++YLH GII+RDLKPENVL+ S D I ++DF S
Sbjct: 119 YFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHS-------------- 164
Query: 253 XXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKI-QTLTPNRLFVAEPVAARSCSFVGTHE 311
+ G + +TL ++A V VGT
Sbjct: 165 -------------------------KILGETSLMRTLCGTPTYLAPEVLVS----VGTAG 195
Query: 312 YVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRN-IVKKPLTFPTQSP 370
Y AVD W+ G+ ++ + G PF+ + +L++ I F +
Sbjct: 196 Y-----------NRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVW 244
Query: 371 SSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
+ +SE A DL+ LL DP R ++ HP+ +
Sbjct: 245 AEVSE-KALDLVKKLLVVDPKARFTTEEAL----RHPWLQ 279
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 118/280 (42%), Gaps = 67/280 (23%)
Query: 136 AEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARF 195
E E +ILK L+HP + + F+A ++ IV+E GG+L +KR + +
Sbjct: 62 VETEIEILKKLNHPCIIKIKNFFDAEDYY-IVLELMEGGELFD--KVVGNKRLKEATCKL 118
Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLVRS---DGHIMLSDFDLSLCSNAIXXXXXXXX 252
Y ++L+A++YLH GII+RDLKPENVL+ S D I ++DF S
Sbjct: 119 YFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHS-------------- 164
Query: 253 XXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKI-QTLTPNRLFVAEPVAARSCSFVGTHE 311
+ G + +TL ++A V VGT
Sbjct: 165 -------------------------KILGETSLMRTLCGTPTYLAPEVLVS----VGTAG 195
Query: 312 YVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRN-IVKKPLTFPTQSP 370
Y AVD W+ G+ ++ + G PF+ + +L++ I F +
Sbjct: 196 Y-----------NRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVW 244
Query: 371 SSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
+ +SE A DL+ LL DP R ++ HP+ +
Sbjct: 245 AEVSE-KALDLVKKLLVVDPKARFTTEEAL----RHPWLQ 279
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 118/280 (42%), Gaps = 67/280 (23%)
Query: 136 AEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARF 195
E E +ILK L+HP + + F+A ++ IV+E GG+L +KR + +
Sbjct: 201 VETEIEILKKLNHPCIIKIKNFFDAEDYY-IVLELMEGGELFD--KVVGNKRLKEATCKL 257
Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLVRS---DGHIMLSDFDLSLCSNAIXXXXXXXX 252
Y ++L+A++YLH GII+RDLKPENVL+ S D I ++DF S
Sbjct: 258 YFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHS-------------- 303
Query: 253 XXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKI-QTLTPNRLFVAEPVAARSCSFVGTHE 311
+ G + +TL ++A V VGT
Sbjct: 304 -------------------------KILGETSLMRTLCGTPTYLAPEVLVS----VGTAG 334
Query: 312 YVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRN-IVKKPLTFPTQSP 370
Y AVD W+ G+ ++ + G PF+ + +L++ I F +
Sbjct: 335 Y-----------NRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVW 383
Query: 371 SSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
+ +SE A DL+ LL DP R ++ HP+ +
Sbjct: 384 AEVSE-KALDLVKKLLVVDPKARFTTEEAL----RHPWLQ 418
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 118/280 (42%), Gaps = 67/280 (23%)
Query: 136 AEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARF 195
E E +ILK L+HP + + F+A ++ IV+E GG+L +KR + +
Sbjct: 68 VETEIEILKKLNHPCIIKIKNFFDAEDYY-IVLELMEGGELFD--KVVGNKRLKEATCKL 124
Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLVRS---DGHIMLSDFDLSLCSNAIXXXXXXXX 252
Y ++L+A++YLH GII+RDLKPENVL+ S D I ++DF S
Sbjct: 125 YFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHS-------------- 170
Query: 253 XXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKI-QTLTPNRLFVAEPVAARSCSFVGTHE 311
+ G + +TL ++A V VGT
Sbjct: 171 -------------------------KILGETSLMRTLCGTPTYLAPEVLVS----VGTAG 201
Query: 312 YVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRN-IVKKPLTFPTQSP 370
Y AVD W+ G+ ++ + G PF+ + +L++ I F +
Sbjct: 202 Y-----------NRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVW 250
Query: 371 SSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
+ +SE A DL+ LL DP R ++ HP+ +
Sbjct: 251 AEVSE-KALDLVKKLLVVDPKARFTTEEAL----RHPWLQ 285
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 118/280 (42%), Gaps = 67/280 (23%)
Query: 136 AEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARF 195
E E +ILK L+HP + + F+A ++ IV+E GG+L +KR + +
Sbjct: 187 VETEIEILKKLNHPCIIKIKNFFDAEDYY-IVLELMEGGELFD--KVVGNKRLKEATCKL 243
Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLVRS---DGHIMLSDFDLSLCSNAIXXXXXXXX 252
Y ++L+A++YLH GII+RDLKPENVL+ S D I ++DF S
Sbjct: 244 YFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHS-------------- 289
Query: 253 XXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKI-QTLTPNRLFVAEPVAARSCSFVGTHE 311
+ G + +TL ++A V VGT
Sbjct: 290 -------------------------KILGETSLMRTLCGTPTYLAPEVLVS----VGTAG 320
Query: 312 YVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRN-IVKKPLTFPTQSP 370
Y AVD W+ G+ ++ + G PF+ + +L++ I F +
Sbjct: 321 Y-----------NRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVW 369
Query: 371 SSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
+ +SE A DL+ LL DP R ++ HP+ +
Sbjct: 370 AEVSE-KALDLVKKLLVVDPKARFTTEEAL----RHPWLQ 404
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 122/321 (38%), Gaps = 82/321 (25%)
Query: 86 RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEM------- 138
R++G+G G V LC ++ GH + + E
Sbjct: 42 RKLGSGAYGEVLLC------KEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYN 95
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSL---RHKQPHKRFSLTSARF 195
E +LK LDHP + L+ FE + +V EF GG+L RHK F A
Sbjct: 96 EISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHK-----FDECDAAN 150
Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLVRSDG---HIMLSDFDLSLCSNAIXXXXXXXX 252
++L + YLH I++RD+KPEN+L+ + +I + DF L
Sbjct: 151 IMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGL--------------- 195
Query: 253 XXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEY 312
S +++ Y R +RL GT Y
Sbjct: 196 --------SSFFSKDYKLR-------------------DRL--------------GTAYY 214
Query: 313 VSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSS 372
++PEV + D W+ G+ +Y ++ G PF +++ ++ + K F +
Sbjct: 215 IAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKN 273
Query: 373 MSEYHARDLISGLLNKDPCNR 393
+S+ A++LI +L D R
Sbjct: 274 ISD-EAKELIKLMLTYDYNKR 293
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 74/333 (22%), Positives = 117/333 (35%), Gaps = 95/333 (28%)
Query: 72 GRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXX 131
G+K DF++ R +G G G VYL R + + A+
Sbjct: 1 GKKRQWALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAG 51
Query: 132 XXHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLT 191
H+ E +I L HP + LY F + +++E+
Sbjct: 52 VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP------------------- 92
Query: 192 SARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXX 251
LG +YR+L+ LS FD
Sbjct: 93 ------------------LGTVYRELQK------------LSKFD--------------- 107
Query: 252 XXXXXXXXRSQTYTRQYSTRLS-----RFLNRFFGSKKIQTLTPNRLFVAE------PVA 300
R+ TY + + LS R ++R + + + L +A+ +
Sbjct: 108 ------EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPS 161
Query: 301 ARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK 360
+R + GT +Y+ PE+ G H VD W+ G+ YE + G+ PF A + + T + I +
Sbjct: 162 SRRTTLSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 221
Query: 361 KPLTFPTQSPSSMSEYHARDLISGLLNKDPCNR 393
TFP ARDLIS LL +P R
Sbjct: 222 VEFTFP-----DFVTEGARDLISRLLKHNPSQR 249
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 98/243 (40%), Gaps = 63/243 (25%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E +I+K+L+HP + L+ E +VME+ SGG++ + H R AR
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFD--YLVAHGRMKEKEARAKFR 120
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
+++ A++Y H I++RDLK EN+L+ +D +I ++DF S
Sbjct: 121 QIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS-------------------- 160
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
N F K+ T F G+ Y +PE+
Sbjct: 161 ------------------NEFTFGNKLDT------------------FCGSPPYAAPELF 184
Query: 319 SGGSH-GNAVDWWAFGIFIYEMIYGRTPFAAPS----NETTLRNIVKKPLTFPTQSPSSM 373
G + G VD W+ G+ +Y ++ G PF + E LR + P T + +
Sbjct: 185 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLL 244
Query: 374 SEY 376
++
Sbjct: 245 KKF 247
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 98/243 (40%), Gaps = 63/243 (25%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E +I+K+L+HP + L+ E +VME+ SGG++ + H R AR
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFD--YLVAHGRMKEKEARAKFR 120
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
+++ A++Y H I++RDLK EN+L+ +D +I ++DF S
Sbjct: 121 QIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS-------------------- 160
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
N F K+ T F G+ Y +PE+
Sbjct: 161 ------------------NEFTFGNKLDT------------------FCGSPPYAAPELF 184
Query: 319 SGGSH-GNAVDWWAFGIFIYEMIYGRTPFAAPS----NETTLRNIVKKPLTFPTQSPSSM 373
G + G VD W+ G+ +Y ++ G PF + E LR + P T + +
Sbjct: 185 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLL 244
Query: 374 SEY 376
++
Sbjct: 245 KKF 247
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 98/243 (40%), Gaps = 63/243 (25%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E +I+K+L+HP + L+ E +VME+ SGG++ + H R AR
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFD--YLVAHGRMKEKEARAKFR 120
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
+++ A++Y H I++RDLK EN+L+ +D +I ++DF S
Sbjct: 121 QIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS-------------------- 160
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
N F K+ T F G+ Y +PE+
Sbjct: 161 ------------------NEFTFGNKLDT------------------FCGSPPYAAPELF 184
Query: 319 SGGSH-GNAVDWWAFGIFIYEMIYGRTPFAAPS----NETTLRNIVKKPLTFPTQSPSSM 373
G + G VD W+ G+ +Y ++ G PF + E LR + P T + +
Sbjct: 185 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLL 244
Query: 374 SEY 376
++
Sbjct: 245 KKF 247
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/357 (21%), Positives = 125/357 (35%), Gaps = 95/357 (26%)
Query: 48 PENLSLKPHRSSDFAYSAIRSATFGRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQ 107
P+ L P + + ++ + +K DF++ R +G G G VYL
Sbjct: 2 PQPLPSAPENNPEEELASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLA-------- 53
Query: 108 DRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIV 167
R + + A+ H+ E +I L HP + LY F + ++
Sbjct: 54 -REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 112
Query: 168 MEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSD 227
+E+ LG +YR+L+
Sbjct: 113 LEYAP-------------------------------------LGTVYRELQ--------- 126
Query: 228 GHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYTRQYSTRLS-----RFLNRFFGS 282
LS FD R+ TY + + LS R ++R
Sbjct: 127 ---KLSKFD---------------------EQRTATYITELANALSYCHSKRVIHRDIKP 162
Query: 283 KKIQTLTPNRLFVAE------PVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFI 336
+ + + L +A+ ++R + GT +Y+ PE+ G H VD W+ G+
Sbjct: 163 ENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLC 222
Query: 337 YEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNR 393
YE + G+ PF A + + T + I + TFP ARDLIS LL +P R
Sbjct: 223 YEFLVGKPPFEANTYQETYKRISRVEFTFP-----DFVTEGARDLISRLLKHNPSQR 274
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 93/234 (39%), Gaps = 63/234 (26%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E +I+K+L+HP + L+ E +VME+ SGG++ + H R AR
Sbjct: 64 EVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFD--YLVAHGRMKEKEARAKFR 121
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
+++ A++Y H I++RDLK EN+L+ D +I ++DF S
Sbjct: 122 QIVSAVQYCHQKYIVHRDLKAENLLLDGDMNIKIADFGFS-------------------- 161
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
N F K+ T F G+ Y +PE+
Sbjct: 162 ------------------NEFTVGNKLDT------------------FCGSPPYAAPELF 185
Query: 319 SGGSH-GNAVDWWAFGIFIYEMIYGRTPFAAPS----NETTLRNIVKKPLTFPT 367
G + G VD W+ G+ +Y ++ G PF + E LR + P T
Sbjct: 186 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMST 239
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 116/336 (34%), Gaps = 95/336 (28%)
Query: 69 ATFGRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXX 128
G K DF++ R +G G G VYL R + + A+
Sbjct: 1 GAMGSKRQWALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLE 51
Query: 129 XXXXXHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRF 188
H+ E +I L HP + LY F + +++E+
Sbjct: 52 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---------------- 95
Query: 189 SLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXX 248
LG +YR+L+ LS FD
Sbjct: 96 ---------------------LGTVYRELQK------------LSKFD------------ 110
Query: 249 XXXXXXXXXXXRSQTYTRQYSTRLS-----RFLNRFFGSKKIQTLTPNRLFVAE------ 297
R+ TY + + LS R ++R + + + L +A+
Sbjct: 111 ---------EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVH 161
Query: 298 PVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRN 357
++R + GT +Y+ PE+ G H VD W+ G+ YE + G+ PF A + + T +
Sbjct: 162 APSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 221
Query: 358 IVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNR 393
I + TFP ARDLIS LL +P R
Sbjct: 222 ISRVEFTFPDFVTEG-----ARDLISRLLKHNPSQR 252
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 122/324 (37%), Gaps = 79/324 (24%)
Query: 78 TFRDFDLHRRIGAGDIGTVY--LCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHR 135
T +F + ++IG G VY C L+ P L + R
Sbjct: 30 TLANFRIEKKIGRGQFSEVYRAACLLDGV--------PVALKKVQIFDLMDAKA-----R 76
Query: 136 AEMEKKI--LKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDL-HSLRHKQPHKRFSLTS 192
A+ K+I LK L+HP + YA F N IV+E GDL ++H + KR
Sbjct: 77 ADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPER 136
Query: 193 ARF-YAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXX 251
+ Y ++ ALE++H +++RD+KP NV + + G + L D L
Sbjct: 137 TVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLG------------- 183
Query: 252 XXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE 311
RFF SK + S VGT
Sbjct: 184 --------------------------RFFSSK----------------TTAAHSLVGTPY 201
Query: 312 YVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKK--PLTFPTQS 369
Y+SPE + D W+ G +YEM ++PF ++ L ++ KK +P
Sbjct: 202 YMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYG--DKMNLYSLCKKIEQCDYPP-L 258
Query: 370 PSSMSEYHARDLISGLLNKDPCNR 393
PS R L++ +N DP R
Sbjct: 259 PSDHYSEELRQLVNMCINPDPEKR 282
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 97/243 (39%), Gaps = 63/243 (25%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E +I+K+L+HP + L+ E ++ME+ SGG++ + H R AR
Sbjct: 61 EVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFD--YLVAHGRMKEKEARSKFR 118
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
+++ A++Y H I++RDLK EN+L+ +D +I ++DF S
Sbjct: 119 QIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFS-------------------- 158
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
N F K+ T F G+ Y +PE+
Sbjct: 159 ------------------NEFTVGGKLDT------------------FCGSPPYAAPELF 182
Query: 319 SGGSH-GNAVDWWAFGIFIYEMIYGRTPFAAPS----NETTLRNIVKKPLTFPTQSPSSM 373
G + G VD W+ G+ +Y ++ G PF + E LR + P T + +
Sbjct: 183 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLL 242
Query: 374 SEY 376
+
Sbjct: 243 KRF 245
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 108/273 (39%), Gaps = 64/273 (23%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E ++ LDH L LY FE+ N +VME+ GG+L + + L + F
Sbjct: 136 EISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFM-K 194
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLV--RSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXX 256
++ + ++H + I++ DLKPEN+L R I + DF L+
Sbjct: 195 QICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLA------------------ 236
Query: 257 XXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE 316
R+Y R +N GT E+++PE
Sbjct: 237 ---------RRYKPREKLKVN-----------------------------FGTPEFLAPE 258
Query: 317 VASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEY 376
V + D W+ G+ Y ++ G +PF ++ TL NI+ + +SE
Sbjct: 259 VVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISE- 317
Query: 377 HARDLISGLLNKDPCNRLGSKRGAADVKTHPFF 409
A++ IS LL K+ R+ A++ HP+
Sbjct: 318 EAKEFISKLLIKEKSWRI----SASEALKHPWL 346
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 103/260 (39%), Gaps = 64/260 (24%)
Query: 135 RAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSAR 194
+ ME I + L H + + FE ++F +V+E C L L HK+ K + AR
Sbjct: 61 KMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL-HKR-RKALTEPEAR 118
Query: 195 FYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXX 254
+Y ++++ +YLH +I+RDLK N+ + D + + DF L
Sbjct: 119 YYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGL----------------- 161
Query: 255 XXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVS 314
+T++ R KK+ TPN Y++
Sbjct: 162 --------------ATKVEYDGER----KKVLCGTPN--------------------YIA 183
Query: 315 PEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQ-SPSSM 373
PEV S H VD W+ G +Y ++ G+ PF + T I K + P +P +
Sbjct: 184 PEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAA 243
Query: 374 SEYHARDLISGLLNKDPCNR 393
S LI +L DP R
Sbjct: 244 S------LIQKMLQTDPTAR 257
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/357 (21%), Positives = 124/357 (34%), Gaps = 95/357 (26%)
Query: 48 PENLSLKPHRSSDFAYSAIRSATFGRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQ 107
P+ L P + + ++ + +K DF++ R +G G G VYL
Sbjct: 2 PQPLPSAPENNPEEELASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLA-------- 53
Query: 108 DRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIV 167
R + + A+ H+ E +I L HP + LY F + ++
Sbjct: 54 -REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 112
Query: 168 MEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSD 227
+E+ LG +YR+L+
Sbjct: 113 LEYAP-------------------------------------LGTVYRELQ--------- 126
Query: 228 GHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYTRQYSTRLS-----RFLNRFFGS 282
LS FD R+ TY + + LS R ++R
Sbjct: 127 ---KLSKFD---------------------EQRTATYITELANALSYCHSKRVIHRDIKP 162
Query: 283 KKIQTLTPNRLFVAE------PVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFI 336
+ + + L +A+ ++R GT +Y+ PE+ G H VD W+ G+
Sbjct: 163 ENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLC 222
Query: 337 YEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNR 393
YE + G+ PF A + + T + I + TFP ARDLIS LL +P R
Sbjct: 223 YEFLVGKPPFEANTYQETYKRISRVEFTFP-----DFVTEGARDLISRLLKHNPSQR 274
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 103/260 (39%), Gaps = 64/260 (24%)
Query: 135 RAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSAR 194
+ ME I + L H + + FE ++F +V+E C L L HK+ K + AR
Sbjct: 85 KMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL-HKR-RKALTEPEAR 142
Query: 195 FYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXX 254
+Y ++++ +YLH +I+RDLK N+ + D + + DF L
Sbjct: 143 YYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGL----------------- 185
Query: 255 XXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVS 314
+T++ R KK+ TPN Y++
Sbjct: 186 --------------ATKVEYDGER----KKVLCGTPN--------------------YIA 207
Query: 315 PEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQ-SPSSM 373
PEV S H VD W+ G +Y ++ G+ PF + T I K + P +P +
Sbjct: 208 PEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAA 267
Query: 374 SEYHARDLISGLLNKDPCNR 393
S LI +L DP R
Sbjct: 268 S------LIQKMLQTDPTAR 281
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/332 (21%), Positives = 116/332 (34%), Gaps = 95/332 (28%)
Query: 73 RKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXX 132
+K DF++ R +G G G VYL R + + A+
Sbjct: 18 KKRQWALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGV 68
Query: 133 XHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTS 192
H+ E +I L HP + LY F + +++E+
Sbjct: 69 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP-------------------- 108
Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXX 252
LG +YR+L+ LS FD
Sbjct: 109 -----------------LGTVYRELQK------------LSKFD---------------- 123
Query: 253 XXXXXXXRSQTYTRQYSTRLS-----RFLNRFFGSKKIQTLTPNRLFVAE------PVAA 301
R+ TY + + LS R ++R + + + L +A+ ++
Sbjct: 124 -----EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS 178
Query: 302 RSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKK 361
R + GT +Y+ PE+ G H VD W+ G+ YE + G+ PF A + + T + I +
Sbjct: 179 RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 238
Query: 362 PLTFPTQSPSSMSEYHARDLISGLLNKDPCNR 393
TFP ARDLIS LL +P R
Sbjct: 239 EFTFP-----DFVTEGARDLISRLLKHNPSQR 265
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 103/260 (39%), Gaps = 64/260 (24%)
Query: 135 RAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSAR 194
+ ME I + L H + + FE ++F +V+E C L L HK+ K + AR
Sbjct: 87 KMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL-HKR-RKALTEPEAR 144
Query: 195 FYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXX 254
+Y ++++ +YLH +I+RDLK N+ + D + + DF L
Sbjct: 145 YYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGL----------------- 187
Query: 255 XXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVS 314
+T++ R KK+ TPN Y++
Sbjct: 188 --------------ATKVEYDGER----KKVLCGTPN--------------------YIA 209
Query: 315 PEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQ-SPSSM 373
PEV S H VD W+ G +Y ++ G+ PF + T I K + P +P +
Sbjct: 210 PEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAA 269
Query: 374 SEYHARDLISGLLNKDPCNR 393
S LI +L DP R
Sbjct: 270 S------LIQKMLQTDPTAR 283
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 117/336 (34%), Gaps = 95/336 (28%)
Query: 69 ATFGRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXX 128
A +K DF++ R +G G G VYL R + + A+
Sbjct: 2 AMESKKRQWALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLE 52
Query: 129 XXXXXHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRF 188
H+ E +I L HP + LY F + +++E+
Sbjct: 53 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---------------- 96
Query: 189 SLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXX 248
LG +YR+L+ LS FD
Sbjct: 97 ---------------------LGTVYRELQK------------LSKFD------------ 111
Query: 249 XXXXXXXXXXXRSQTYTRQYSTRLS-----RFLNRFFGSKKIQTLTPNRLFVAE------ 297
R+ TY + + LS R ++R + + + L +A+
Sbjct: 112 ---------EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVH 162
Query: 298 PVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRN 357
++R + GT +Y+ PE+ G H VD W+ G+ YE + G+ PF A + + T +
Sbjct: 163 APSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 222
Query: 358 IVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNR 393
I + TFP ARDLIS LL +P R
Sbjct: 223 ISRVEFTFP-----DFVTEGARDLISRLLKHNPSQR 253
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/332 (21%), Positives = 116/332 (34%), Gaps = 95/332 (28%)
Query: 73 RKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXX 132
+K DF++ R +G G G VYL R + + A+
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGV 54
Query: 133 XHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTS 192
H+ E +I L HP + LY F + +++E+
Sbjct: 55 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP-------------------- 94
Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXX 252
LG +YR+L+ LS FD
Sbjct: 95 -----------------LGTVYRELQK------------LSKFD---------------- 109
Query: 253 XXXXXXXRSQTYTRQYSTRLS-----RFLNRFFGSKKIQTLTPNRLFVAE------PVAA 301
R+ TY + + LS R ++R + + + L +A+ ++
Sbjct: 110 -----EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS 164
Query: 302 RSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKK 361
R + GT +Y+ PE+ G H VD W+ G+ YE + G+ PF A + + T + I +
Sbjct: 165 RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 224
Query: 362 PLTFPTQSPSSMSEYHARDLISGLLNKDPCNR 393
TFP ARDLIS LL +P R
Sbjct: 225 EFTFP-----DFVTEGARDLISRLLKHNPSQR 251
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/332 (21%), Positives = 116/332 (34%), Gaps = 95/332 (28%)
Query: 73 RKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXX 132
+K DF++ R +G G G VYL R + + A+
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGV 54
Query: 133 XHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTS 192
H+ E +I L HP + LY F + +++E+
Sbjct: 55 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP-------------------- 94
Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXX 252
LG +YR+L+ LS FD
Sbjct: 95 -----------------LGTVYRELQK------------LSKFD---------------- 109
Query: 253 XXXXXXXRSQTYTRQYSTRLS-----RFLNRFFGSKKIQTLTPNRLFVAE------PVAA 301
R+ TY + + LS R ++R + + + L +A+ ++
Sbjct: 110 -----EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS 164
Query: 302 RSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKK 361
R + GT +Y+ PE+ G H VD W+ G+ YE + G+ PF A + + T + I +
Sbjct: 165 RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 224
Query: 362 PLTFPTQSPSSMSEYHARDLISGLLNKDPCNR 393
TFP ARDLIS LL +P R
Sbjct: 225 EFTFPDFVTEG-----ARDLISRLLKHNPSQR 251
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 114/317 (35%), Gaps = 98/317 (30%)
Query: 135 RAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDL------------------ 176
R + E +++K L HP + LY +E + C+VME C GG L
Sbjct: 74 RIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMD 133
Query: 177 ---------------------HSLRHKQPH-KRFSLTSARFYAAEVLVALEYLHMLGIIY 214
H R +R L S ++ AL YLH GI +
Sbjct: 134 VVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISN--IMRQIFSALHYLHNQGICH 191
Query: 215 RDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYTRQYSTRLSR 274
RD+KPEN L ++ + D L
Sbjct: 192 RDIKPENFLFSTNKSFEIKLVDFGL----------------------------------- 216
Query: 275 FLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV--ASGGSHGNAVDWWAF 332
SK+ L + A GT +V+PEV + S+G D W+
Sbjct: 217 -------SKEFYKLNNGEYYGMTTKA-------GTPYFVAPEVLNTTNESYGPKCDAWSA 262
Query: 333 GIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCN 392
G+ ++ ++ G PF ++ T+ ++ K L F + + +S ARDL+S LLN++
Sbjct: 263 GVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPL-ARDLLSNLLNRNVDE 321
Query: 393 RLGSKRGAADVKTHPFF 409
R + R HP+
Sbjct: 322 RFDAMRAL----QHPWI 334
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/332 (21%), Positives = 115/332 (34%), Gaps = 95/332 (28%)
Query: 73 RKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXX 132
+K DF++ R +G G G VYL R + + A+
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGV 56
Query: 133 XHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTS 192
H+ E +I L HP + LY F + +++E+
Sbjct: 57 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP-------------------- 96
Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXX 252
LG +YR+L+ LS FD
Sbjct: 97 -----------------LGTVYRELQ------------KLSKFD---------------- 111
Query: 253 XXXXXXXRSQTYTRQYSTRLS-----RFLNRFFGSKKIQTLTPNRLFVAE------PVAA 301
R+ TY + + LS R ++R + + + L +A+ ++
Sbjct: 112 -----EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS 166
Query: 302 RSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKK 361
R + GT +Y+ PE G H VD W+ G+ YE + G+ PF A + + T + I +
Sbjct: 167 RRTTLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 226
Query: 362 PLTFPTQSPSSMSEYHARDLISGLLNKDPCNR 393
TFP ARDLIS LL +P R
Sbjct: 227 EFTFP-----DFVTEGARDLISRLLKHNPSQR 253
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/332 (21%), Positives = 115/332 (34%), Gaps = 95/332 (28%)
Query: 73 RKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXX 132
+K DF++ R +G G G VYL R + + A+
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGV 56
Query: 133 XHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTS 192
H+ E +I L HP + LY F + +++E+
Sbjct: 57 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP-------------------- 96
Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXX 252
LG +YR+L+ LS FD
Sbjct: 97 -----------------LGTVYRELQK------------LSKFD---------------- 111
Query: 253 XXXXXXXRSQTYTRQYSTRLS-----RFLNRFFGSKKIQTLTPNRLFVAE------PVAA 301
R+ TY + + LS R ++R + + + L +A+ ++
Sbjct: 112 -----EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS 166
Query: 302 RSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKK 361
R GT +Y+ PE+ G H VD W+ G+ YE + G+ PF A + + T + I +
Sbjct: 167 RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 226
Query: 362 PLTFPTQSPSSMSEYHARDLISGLLNKDPCNR 393
TFP ARDLIS LL +P R
Sbjct: 227 EFTFPDFVTEG-----ARDLISRLLKHNPSQR 253
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 115/331 (34%), Gaps = 95/331 (28%)
Query: 74 KTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXX 133
K DF++ R +G G G VYL R + + A+
Sbjct: 2 KRQWALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVE 52
Query: 134 HRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSA 193
H+ E +I L HP + LY F + +++E+
Sbjct: 53 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP--------------------- 91
Query: 194 RFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXX 253
LG +YR+L+ LS FD
Sbjct: 92 ----------------LGTVYRELQK------------LSKFD----------------- 106
Query: 254 XXXXXXRSQTYTRQYSTRLS-----RFLNRFFGSKKIQTLTPNRLFVAE------PVAAR 302
R+ TY + + LS R ++R + + + L +A+ ++R
Sbjct: 107 ----EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 162
Query: 303 SCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKP 362
+ GT +Y+ PE+ G H VD W+ G+ YE + G+ PF A + + T + I +
Sbjct: 163 RAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 222
Query: 363 LTFPTQSPSSMSEYHARDLISGLLNKDPCNR 393
TFP ARDLIS LL +P R
Sbjct: 223 FTFPDFVTEG-----ARDLISRLLKHNPSQR 248
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 113/321 (35%), Gaps = 75/321 (23%)
Query: 74 KTGLTFRDFDLHRRIGAGDIGTVYLC-SLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXX 132
K DF++ R +G G G VYL N+K+ + A+
Sbjct: 2 KRQWALEDFEIGRPLGKGKFGNVYLAREKNSKF----------ILALKVLFKAQLEKAGV 51
Query: 133 XHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTS 192
H+ E +I L HP + LY F S +++E+
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAP-------------------- 91
Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXX 252
LG +YR+L+ LS FD + I
Sbjct: 92 -----------------LGTVYRELQK------------LSKFDEQRTATYITELANAL- 121
Query: 253 XXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEY 312
S ++++ R + N GS + V P ++R + GT +Y
Sbjct: 122 --------SYCHSKKVIHRDIKPENLLLGSAGELKIADFGWSVHAP-SSRRAALCGTLDY 172
Query: 313 VSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSS 372
+ PE+ G H VD W+ G+ YE + G+ PF A + + T + I + TFP
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFTFPDFVTEG 232
Query: 373 MSEYHARDLISGLLNKDPCNR 393
ARDLIS LL +P R
Sbjct: 233 -----ARDLISRLLKHNPSQR 248
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 73/332 (21%), Positives = 115/332 (34%), Gaps = 95/332 (28%)
Query: 73 RKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXX 132
+K DF++ R +G G G VYL R + + A+
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGV 54
Query: 133 XHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTS 192
H+ E +I L HP + LY F + +++E+
Sbjct: 55 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP-------------------- 94
Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXX 252
LG +YR+L+ LS FD
Sbjct: 95 -----------------LGTVYRELQK------------LSKFD---------------- 109
Query: 253 XXXXXXXRSQTYTRQYSTRLS-----RFLNRFFGSKKIQTLTPNRLFVAE------PVAA 301
R+ TY + + LS R ++R + + + L +A ++
Sbjct: 110 -----EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSS 164
Query: 302 RSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKK 361
R + GT +Y+ PE+ G H VD W+ G+ YE + G+ PF A + + T + I +
Sbjct: 165 RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 224
Query: 362 PLTFPTQSPSSMSEYHARDLISGLLNKDPCNR 393
TFP ARDLIS LL +P R
Sbjct: 225 EFTFPDFVTEG-----ARDLISRLLKHNPSQR 251
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 73/332 (21%), Positives = 115/332 (34%), Gaps = 95/332 (28%)
Query: 73 RKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXX 132
+K DF++ R +G G G VYL R + + A+
Sbjct: 3 KKRQWALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGV 53
Query: 133 XHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTS 192
H+ E +I L HP + LY F + +++E+
Sbjct: 54 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP-------------------- 93
Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXX 252
LG +YR+L+ LS FD
Sbjct: 94 -----------------LGTVYRELQK------------LSKFD---------------- 108
Query: 253 XXXXXXXRSQTYTRQYSTRLS-----RFLNRFFGSKKIQTLTPNRLFVAE------PVAA 301
R+ TY + + LS R ++R + + + L +A ++
Sbjct: 109 -----EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSS 163
Query: 302 RSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKK 361
R + GT +Y+ PE+ G H VD W+ G+ YE + G+ PF A + + T + I +
Sbjct: 164 RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 223
Query: 362 PLTFPTQSPSSMSEYHARDLISGLLNKDPCNR 393
TFP ARDLIS LL +P R
Sbjct: 224 EFTFP-----DFVTEGARDLISRLLKHNPSQR 250
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 73/332 (21%), Positives = 115/332 (34%), Gaps = 95/332 (28%)
Query: 73 RKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXX 132
+K DF++ R +G G G VYL R + + A+
Sbjct: 1 KKRQWALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGV 51
Query: 133 XHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTS 192
H+ E +I L HP + LY F + +++E+
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP-------------------- 91
Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXX 252
LG +YR+L+ LS FD
Sbjct: 92 -----------------LGTVYRELQK------------LSKFD---------------- 106
Query: 253 XXXXXXXRSQTYTRQYSTRLS-----RFLNRFFGSKKIQTLTPNRLFVAE------PVAA 301
R+ TY + + LS R ++R + + + L +A+ ++
Sbjct: 107 -----EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS 161
Query: 302 RSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKK 361
R GT +Y+ PE+ G H VD W+ G+ YE + G+ PF A + + T + I +
Sbjct: 162 RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 221
Query: 362 PLTFPTQSPSSMSEYHARDLISGLLNKDPCNR 393
TFP ARDLIS LL +P R
Sbjct: 222 EFTFPDFVTEG-----ARDLISRLLKHNPSQR 248
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 73/332 (21%), Positives = 115/332 (34%), Gaps = 95/332 (28%)
Query: 73 RKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXX 132
+K DF++ R +G G G VYL R + + A+
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGV 52
Query: 133 XHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTS 192
H+ E +I L HP + LY F + +++E+
Sbjct: 53 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP-------------------- 92
Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXX 252
LG +YR+L+ LS FD
Sbjct: 93 -----------------LGTVYRELQK------------LSKFD---------------- 107
Query: 253 XXXXXXXRSQTYTRQYSTRLS-----RFLNRFFGSKKIQTLTPNRLFVAE------PVAA 301
R+ TY + + LS R ++R + + + L +A+ ++
Sbjct: 108 -----EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS 162
Query: 302 RSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKK 361
R GT +Y+ PE+ G H VD W+ G+ YE + G+ PF A + + T + I +
Sbjct: 163 RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 222
Query: 362 PLTFPTQSPSSMSEYHARDLISGLLNKDPCNR 393
TFP ARDLIS LL +P R
Sbjct: 223 EFTFPDFVTEG-----ARDLISRLLKHNPSQR 249
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 115/331 (34%), Gaps = 95/331 (28%)
Query: 74 KTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXX 133
K DF++ R +G G G VYL R + + A+
Sbjct: 1 KRQWALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVE 51
Query: 134 HRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSA 193
H+ E +I L HP + LY F + +++E+
Sbjct: 52 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP--------------------- 90
Query: 194 RFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXX 253
LG +YR+L+ LS FD
Sbjct: 91 ----------------LGTVYRELQK------------LSKFD----------------- 105
Query: 254 XXXXXXRSQTYTRQYSTRLS-----RFLNRFFGSKKIQTLTPNRLFVAE------PVAAR 302
R+ TY + + LS R ++R + + + L +A+ ++R
Sbjct: 106 ----EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 161
Query: 303 SCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKP 362
+ GT +Y+ PE+ G H VD W+ G+ YE + G+ PF A + + T + I +
Sbjct: 162 RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 221
Query: 363 LTFPTQSPSSMSEYHARDLISGLLNKDPCNR 393
TFP ARDLIS LL +P R
Sbjct: 222 FTFPDFVTEG-----ARDLISRLLKHNPSQR 247
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 73/332 (21%), Positives = 115/332 (34%), Gaps = 95/332 (28%)
Query: 73 RKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXX 132
+K DF++ R +G G G VYL R + + A+
Sbjct: 3 KKRQWALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGV 53
Query: 133 XHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTS 192
H+ E +I L HP + LY F + +++E+
Sbjct: 54 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP-------------------- 93
Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXX 252
LG +YR+L+ LS FD
Sbjct: 94 -----------------LGTVYRELQK------------LSKFD---------------- 108
Query: 253 XXXXXXXRSQTYTRQYSTRLS-----RFLNRFFGSKKIQTLTPNRLFVAE------PVAA 301
R+ TY + + LS R ++R + + + L +A+ ++
Sbjct: 109 -----EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS 163
Query: 302 RSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKK 361
R GT +Y+ PE+ G H VD W+ G+ YE + G+ PF A + + T + I +
Sbjct: 164 RRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 223
Query: 362 PLTFPTQSPSSMSEYHARDLISGLLNKDPCNR 393
TFP ARDLIS LL +P R
Sbjct: 224 EFTFPDFVTEG-----ARDLISRLLKHNPSQR 250
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 114/327 (34%), Gaps = 95/327 (29%)
Query: 78 TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAE 137
DF++ R +G G G VYL R + + A+ H+
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLR 59
Query: 138 MEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYA 197
E +I L HP + LY F + +++E+
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP------------------------- 94
Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXX 257
LG +YR+L+ LS FD
Sbjct: 95 ------------LGTVYRELQK------------LSKFD--------------------- 109
Query: 258 XXRSQTYTRQYSTRLS-----RFLNRFFGSKKIQTLTPNRLFVAE------PVAARSCSF 306
R+ TY + + LS R ++R + + + L +A+ ++R +
Sbjct: 110 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAAL 169
Query: 307 VGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFP 366
GT +Y+ PE+ G H VD W+ G+ YE + G+ PF A + + T + I + TFP
Sbjct: 170 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 229
Query: 367 TQSPSSMSEYHARDLISGLLNKDPCNR 393
ARDLIS LL +P R
Sbjct: 230 DFVTEG-----ARDLISRLLKHNPSQR 251
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 102/260 (39%), Gaps = 64/260 (24%)
Query: 135 RAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSAR 194
+ ME I + L H + + FE ++F +V+E C L L HK+ K + AR
Sbjct: 63 KMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL-HKR-RKALTEPEAR 120
Query: 195 FYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXX 254
+Y ++++ +YLH +I+RDLK N+ + D + + DF L
Sbjct: 121 YYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGL----------------- 163
Query: 255 XXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVS 314
+T++ R KK TPN Y++
Sbjct: 164 --------------ATKVEYDGER----KKTLCGTPN--------------------YIA 185
Query: 315 PEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQ-SPSSM 373
PEV S H VD W+ G +Y ++ G+ PF + T I K + P +P +
Sbjct: 186 PEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAA 245
Query: 374 SEYHARDLISGLLNKDPCNR 393
S LI +L DP R
Sbjct: 246 S------LIQKMLQTDPTAR 259
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 73/332 (21%), Positives = 116/332 (34%), Gaps = 95/332 (28%)
Query: 73 RKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXX 132
+K DF++ R +G G G VYL R + + A+
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGV 52
Query: 133 XHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTS 192
H+ E +I L HP + LY F + +++E+
Sbjct: 53 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP-------------------- 92
Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXX 252
LG +YR+L+ LS FD
Sbjct: 93 -----------------LGTVYRELQK------------LSKFD---------------- 107
Query: 253 XXXXXXXRSQTYTRQYSTRLS-----RFLNRFFGSKKIQTLTPNRLFVAE------PVAA 301
R+ TY + + LS R ++R + + + L +A+ ++
Sbjct: 108 -----EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS 162
Query: 302 RSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKK 361
R + GT +Y+ PE+ G H VD W+ G+ YE + G+ PF A + + T + I +
Sbjct: 163 RRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 222
Query: 362 PLTFPTQSPSSMSEYHARDLISGLLNKDPCNR 393
TFP ARDLIS LL +P R
Sbjct: 223 EFTFPDFVTEG-----ARDLISRLLKHNPSQR 249
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 73/332 (21%), Positives = 115/332 (34%), Gaps = 95/332 (28%)
Query: 73 RKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXX 132
+K DF++ R +G G G VYL R + + A+
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGV 54
Query: 133 XHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTS 192
H+ E +I L HP + LY F + +++E+
Sbjct: 55 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP-------------------- 94
Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXX 252
LG +YR+L+ LS FD
Sbjct: 95 -----------------LGTVYRELQK------------LSKFD---------------- 109
Query: 253 XXXXXXXRSQTYTRQYSTRLS-----RFLNRFFGSKKIQTLTPNRLFVAE------PVAA 301
R+ TY + + LS R ++R + + + L +A+ ++
Sbjct: 110 -----EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS 164
Query: 302 RSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKK 361
R GT +Y+ PE+ G H VD W+ G+ YE + G+ PF A + + T + I +
Sbjct: 165 RRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 224
Query: 362 PLTFPTQSPSSMSEYHARDLISGLLNKDPCNR 393
TFP ARDLIS LL +P R
Sbjct: 225 EFTFPDFVTEG-----ARDLISRLLKHNPSQR 251
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 102/260 (39%), Gaps = 64/260 (24%)
Query: 135 RAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSAR 194
+ ME I + L H + + FE ++F +V+E C L L HK+ K + AR
Sbjct: 67 KMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL-HKR-RKALTEPEAR 124
Query: 195 FYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXX 254
+Y ++++ +YLH +I+RDLK N+ + D + + DF L
Sbjct: 125 YYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGL----------------- 167
Query: 255 XXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVS 314
+T++ R KK TPN Y++
Sbjct: 168 --------------ATKVEYDGER----KKTLCGTPN--------------------YIA 189
Query: 315 PEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQ-SPSSM 373
PEV S H VD W+ G +Y ++ G+ PF + T I K + P +P +
Sbjct: 190 PEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAA 249
Query: 374 SEYHARDLISGLLNKDPCNR 393
S LI +L DP R
Sbjct: 250 S------LIQKMLQTDPTAR 263
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 102/260 (39%), Gaps = 64/260 (24%)
Query: 135 RAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSAR 194
+ ME I + L H + + FE ++F +V+E C L L HK+ K + AR
Sbjct: 63 KMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL-HKR-RKALTEPEAR 120
Query: 195 FYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXX 254
+Y ++++ +YLH +I+RDLK N+ + D + + DF L
Sbjct: 121 YYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGL----------------- 163
Query: 255 XXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVS 314
+T++ R KK TPN Y++
Sbjct: 164 --------------ATKVEYDGER----KKTLCGTPN--------------------YIA 185
Query: 315 PEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQ-SPSSM 373
PEV S H VD W+ G +Y ++ G+ PF + T I K + P +P +
Sbjct: 186 PEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAA 245
Query: 374 SEYHARDLISGLLNKDPCNR 393
S LI +L DP R
Sbjct: 246 S------LIQKMLQTDPTAR 259
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 97/243 (39%), Gaps = 63/243 (25%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E +I+K+L+HP + L+ E +VME+ SGG++ + H AR
Sbjct: 56 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFD--YLVAHGWMKEKEARAKFR 113
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
+++ A++Y H I++RDLK EN+L+ +D +I ++DF S
Sbjct: 114 QIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS-------------------- 153
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
N F K+ T F G+ Y +PE+
Sbjct: 154 ------------------NEFTFGNKLDT------------------FCGSPPYAAPELF 177
Query: 319 SGGSH-GNAVDWWAFGIFIYEMIYGRTPFAAPS----NETTLRNIVKKPLTFPTQSPSSM 373
G + G VD W+ G+ +Y ++ G PF + E LR + P T + +
Sbjct: 178 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLL 237
Query: 374 SEY 376
++
Sbjct: 238 KKF 240
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 114/331 (34%), Gaps = 95/331 (28%)
Query: 74 KTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXX 133
K DF++ R +G G G VYL R + + A+
Sbjct: 2 KRQWALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVE 52
Query: 134 HRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSA 193
H+ E +I L HP + LY F + +++E+
Sbjct: 53 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP--------------------- 91
Query: 194 RFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXX 253
LG +YR+L+ LS FD
Sbjct: 92 ----------------LGTVYRELQK------------LSKFD----------------- 106
Query: 254 XXXXXXRSQTYTRQYSTRLS-----RFLNRFFGSKKIQTLTPNRLFVAE------PVAAR 302
R+ TY + + LS R ++R + + + L +A+ ++R
Sbjct: 107 ----EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 162
Query: 303 SCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKP 362
GT +Y+ PE+ G H VD W+ G+ YE + G+ PF A + + T + I +
Sbjct: 163 RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 222
Query: 363 LTFPTQSPSSMSEYHARDLISGLLNKDPCNR 393
TFP ARDLIS LL +P R
Sbjct: 223 FTFPDFVTEG-----ARDLISRLLKHNPSQR 248
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 114/331 (34%), Gaps = 95/331 (28%)
Query: 74 KTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXX 133
K DF++ R +G G G VYL R + + A+
Sbjct: 2 KRQWALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVE 52
Query: 134 HRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSA 193
H+ E +I L HP + LY F + +++E+
Sbjct: 53 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP--------------------- 91
Query: 194 RFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXX 253
LG +YR+L+ LS FD
Sbjct: 92 ----------------LGTVYRELQK------------LSKFD----------------- 106
Query: 254 XXXXXXRSQTYTRQYSTRLS-----RFLNRFFGSKKIQTLTPNRLFVAE------PVAAR 302
R+ TY + + LS R ++R + + + L +A+ ++R
Sbjct: 107 ----EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 162
Query: 303 SCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKP 362
GT +Y+ PE+ G H VD W+ G+ YE + G+ PF A + + T + I +
Sbjct: 163 RTXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 222
Query: 363 LTFPTQSPSSMSEYHARDLISGLLNKDPCNR 393
TFP ARDLIS LL +P R
Sbjct: 223 FTFPDFVTEG-----ARDLISRLLKHNPSQR 248
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 114/327 (34%), Gaps = 95/327 (29%)
Query: 78 TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAE 137
DF++ R +G G G VYL R + + A+ H+
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLR 56
Query: 138 MEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYA 197
E +I L HP + LY F + +++E+
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP------------------------- 91
Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXX 257
LG +YR+L+ LS FD
Sbjct: 92 ------------LGTVYRELQK------------LSKFD--------------------- 106
Query: 258 XXRSQTYTRQYSTRLS-----RFLNRFFGSKKIQTLTPNRLFVAE------PVAARSCSF 306
R+ TY + + LS R ++R + + + L +A+ ++R +
Sbjct: 107 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL 166
Query: 307 VGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFP 366
GT +Y+ PE+ G H VD W+ G+ YE + G+ PF A + + T + I + TFP
Sbjct: 167 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 226
Query: 367 TQSPSSMSEYHARDLISGLLNKDPCNR 393
ARDLIS LL +P R
Sbjct: 227 -----DFVTEGARDLISRLLKHNPSQR 248
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 78/172 (45%), Gaps = 13/172 (7%)
Query: 74 KTGLTFRDFDLHRRIGAGDIGTVYLC-SLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXX 132
K T DFD+ R +G G G VYL NK+ + A+
Sbjct: 9 KRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKF----------IMALKVLFKSQLEKEGV 58
Query: 133 XHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTS 192
H+ E +I L HP + +Y F +++EF G+L+ + Q H RF
Sbjct: 59 EHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELY--KELQKHGRFDEQR 116
Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAI 244
+ + E+ AL Y H +I+RD+KPEN+L+ G + ++DF S+ + ++
Sbjct: 117 SATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL 168
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 57/124 (45%), Gaps = 13/124 (10%)
Query: 300 AARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIV 359
+ R GT +Y+ PE+ G +H VD W G+ YE + G PF +PS+ T R IV
Sbjct: 167 SLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIV 226
Query: 360 KKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRS 419
L FP ++DLIS LL P RL K V HP+ K A R
Sbjct: 227 NVDLKFPPFLSDG-----SKDLISKLLRYHPPQRLPLK----GVMEHPWVK----ANSRR 273
Query: 420 LTPP 423
+ PP
Sbjct: 274 VLPP 277
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 115/304 (37%), Gaps = 88/304 (28%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E I++ H + +Y + + +VMEF GG L + H R +
Sbjct: 198 EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVT---HTRMNEEQIAAVCL 254
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
VL AL LH G+I+RD+K +++L+ DG + LSDF C+
Sbjct: 255 AVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDF--GFCAQV--------------- 297
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
SK++ R VGT +++PE+
Sbjct: 298 -----------------------SKEV---------------PRRKXLVGTPYWMAPELI 319
Query: 319 SGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLR--NIVKKPLTFPTQSPSSMSEY 376
S +G VD W+ GI + EM+ G P+ NE L+ +++ L P +
Sbjct: 320 SRLPYGPEVDIWSLGIMVIEMVDGEPPYF---NEPPLKAMKMIRDNL------PPRLKNL 370
Query: 377 HA-----RDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPE--IPGMR 429
H + + LL +DP R AA++ HPF PP +P MR
Sbjct: 371 HKVSPSLKGFLDRLLVRDPAQRA----TAAELLKHPFLAKAG--------PPASIVPLMR 418
Query: 430 RQKT 433
+ +T
Sbjct: 419 QNRT 422
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 78/172 (45%), Gaps = 13/172 (7%)
Query: 74 KTGLTFRDFDLHRRIGAGDIGTVYLC-SLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXX 132
K T DFD+ R +G G G VYL NK+ + A+
Sbjct: 8 KRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKF----------IMALKVLFKSQLEKEGV 57
Query: 133 XHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTS 192
H+ E +I L HP + +Y F +++EF G+L+ + Q H RF
Sbjct: 58 EHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELY--KELQKHGRFDEQR 115
Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAI 244
+ + E+ AL Y H +I+RD+KPEN+L+ G + ++DF S+ + ++
Sbjct: 116 SATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL 167
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 57/124 (45%), Gaps = 13/124 (10%)
Query: 300 AARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIV 359
+ R GT +Y+ PE+ G +H VD W G+ YE + G PF +PS+ T R IV
Sbjct: 166 SLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIV 225
Query: 360 KKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRS 419
L FP ++DLIS LL P RL K V HP+ K A R
Sbjct: 226 NVDLKFPPFLSDG-----SKDLISKLLRYHPPQRLPLK----GVMEHPWVK----ANSRR 272
Query: 420 LTPP 423
+ PP
Sbjct: 273 VLPP 276
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 109/273 (39%), Gaps = 58/273 (21%)
Query: 139 EKKILKML-DHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYA 197
E IL+ + HP + TL +E+S+F +V + G+L ++ S R
Sbjct: 149 ETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEK--VALSEKETRSIM 206
Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXX 257
+L A+ +LH I++RDLKPEN+L+ + I LSDF S C
Sbjct: 207 RSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFS-C----------------- 248
Query: 258 XXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV 317
+K++ L ++A + CS TH
Sbjct: 249 --------------------HLEPGEKLRELCGTPGYLAPEIL--KCSMDETH------- 279
Query: 318 ASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYH 377
+G VD WA G+ ++ ++ G PF LR I++ F + S
Sbjct: 280 ---PGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSST- 335
Query: 378 ARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
+DLIS LL DP RL +++ HPFF+
Sbjct: 336 VKDLISRLLQVDPEARLTAEQAL----QHPFFE 364
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 114/331 (34%), Gaps = 95/331 (28%)
Query: 74 KTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXX 133
K DF++ R +G G G VYL R + + A+
Sbjct: 2 KRQWALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVE 52
Query: 134 HRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSA 193
H+ E +I L HP + LY F + +++E+
Sbjct: 53 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP--------------------- 91
Query: 194 RFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXX 253
LG +YR+L+ LS FD
Sbjct: 92 ----------------LGTVYRELQK------------LSKFD----------------- 106
Query: 254 XXXXXXRSQTYTRQYSTRLS-----RFLNRFFGSKKIQTLTPNRLFVAE------PVAAR 302
R+ TY + + LS R ++R + + + L +A+ ++R
Sbjct: 107 ----EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 162
Query: 303 SCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKP 362
GT +Y+ PE+ G H VD W+ G+ YE + G+ PF A + + T + I +
Sbjct: 163 RXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 222
Query: 363 LTFPTQSPSSMSEYHARDLISGLLNKDPCNR 393
TFP ARDLIS LL +P R
Sbjct: 223 FTFPDFVTEG-----ARDLISRLLKHNPSQR 248
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 114/327 (34%), Gaps = 95/327 (29%)
Query: 78 TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAE 137
DF++ R +G G G VYL R + + A+ H+
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLA---------REKQRKFILALKVLFKAQLEKAGVEHQLR 53
Query: 138 MEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYA 197
E +I L HP + LY F + +++E+
Sbjct: 54 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP------------------------- 88
Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXX 257
LG +YR+L+ LS FD
Sbjct: 89 ------------LGTVYRELQK------------LSKFD--------------------- 103
Query: 258 XXRSQTYTRQYSTRLS-----RFLNRFFGSKKIQTLTPNRLFVAE------PVAARSCSF 306
R+ TY + + LS R ++R + + + L +A+ ++R +
Sbjct: 104 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL 163
Query: 307 VGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFP 366
GT +Y+ PE+ G H VD W+ G+ YE + G+ PF A + + T + I + TFP
Sbjct: 164 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 223
Query: 367 TQSPSSMSEYHARDLISGLLNKDPCNR 393
ARDLIS LL +P R
Sbjct: 224 DFVTEG-----ARDLISRLLKHNPSQR 245
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 113/327 (34%), Gaps = 95/327 (29%)
Query: 78 TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAE 137
DF++ R +G G G VYL R + + A+ H+
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLR 56
Query: 138 MEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYA 197
E +I L HP + LY F + +++E+
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP------------------------- 91
Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXX 257
LG +YR+L+ LS FD
Sbjct: 92 ------------LGTVYRELQK------------LSKFD--------------------- 106
Query: 258 XXRSQTYTRQYSTRLS-----RFLNRFFGSKKIQTLTPNRLFVAE------PVAARSCSF 306
R+ TY + + LS R ++R + + + L +A+ ++R
Sbjct: 107 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTEL 166
Query: 307 VGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFP 366
GT +Y+ PE+ G H VD W+ G+ YE + G+ PF A + + T + I + TFP
Sbjct: 167 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 226
Query: 367 TQSPSSMSEYHARDLISGLLNKDPCNR 393
ARDLIS LL +P R
Sbjct: 227 -----DFVTEGARDLISRLLKHNPSQR 248
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 104/272 (38%), Gaps = 67/272 (24%)
Query: 81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEK 140
D+DL + +G G G V L N+ ++ A+ + E
Sbjct: 7 DWDLVQTLGEGAYGEVQLAV--NRVTEE---------AVAVKIVDMKRAVDCPENIKKEI 55
Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
I KML+H + Y N + +E+CSGG+L +P A+ + ++
Sbjct: 56 XINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFFHQL 113
Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXR 260
+ + YLH +GI +RD+KPEN+L+ ++ +SDF L+
Sbjct: 114 MAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF------------------- 154
Query: 261 SQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG 320
+Y+ R R LN+ GT YV+PE+
Sbjct: 155 ------RYNNR-ERLLNK---------------------------MCGTLPYVAPELLKR 180
Query: 321 GS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSN 351
H VD W+ GI + M+ G P+ PS+
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 115/304 (37%), Gaps = 88/304 (28%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E I++ H + +Y + + +VMEF GG L + H R +
Sbjct: 76 EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI---VTHTRMNEEQIAAVCL 132
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
VL AL LH G+I+RD+K +++L+ DG + LSDF C+
Sbjct: 133 AVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDF--GFCAQV--------------- 175
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
SK++ R VGT +++PE+
Sbjct: 176 -----------------------SKEV---------------PRRKXLVGTPYWMAPELI 197
Query: 319 SGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLR--NIVKKPLTFPTQSPSSMSEY 376
S +G VD W+ GI + EM+ G P+ NE L+ +++ L P +
Sbjct: 198 SRLPYGPEVDIWSLGIMVIEMVDGEPPYF---NEPPLKAMKMIRDNL------PPRLKNL 248
Query: 377 HA-----RDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPE--IPGMR 429
H + + LL +DP R AA++ HPF PP +P MR
Sbjct: 249 HKVSPSLKGFLDRLLVRDPAQR----ATAAELLKHPFLAKAG--------PPASIVPLMR 296
Query: 430 RQKT 433
+ +T
Sbjct: 297 QNRT 300
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 104/272 (38%), Gaps = 67/272 (24%)
Query: 81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEK 140
D+DL + +G G G V L N+ ++ A+ + E
Sbjct: 7 DWDLVQTLGEGAYGEVQLAV--NRVTEE---------AVAVKIVDMKRAVDCPENIKKEI 55
Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
I KML+H + Y N + +E+CSGG+L +P A+ + ++
Sbjct: 56 XINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFFHQL 113
Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXR 260
+ + YLH +GI +RD+KPEN+L+ ++ +SDF L+
Sbjct: 114 MAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF------------------- 154
Query: 261 SQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG 320
+Y+ R R LN+ GT YV+PE+
Sbjct: 155 ------RYNNR-ERLLNK---------------------------MXGTLPYVAPELLKR 180
Query: 321 GS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSN 351
H VD W+ GI + M+ G P+ PS+
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 78/172 (45%), Gaps = 13/172 (7%)
Query: 74 KTGLTFRDFDLHRRIGAGDIGTVYLC-SLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXX 132
K T DFD+ R +G G G VYL NK+ + A+
Sbjct: 8 KRKFTIDDFDIVRPLGKGKFGNVYLAREKQNKF----------IMALKVLFKSQLEKEGV 57
Query: 133 XHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTS 192
H+ E +I L HP + +Y F +++EF G+L+ + Q H RF
Sbjct: 58 EHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELY--KELQKHGRFDEQR 115
Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAI 244
+ + E+ AL Y H +I+RD+KPEN+L+ G + ++DF S+ + ++
Sbjct: 116 SATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL 167
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 57/124 (45%), Gaps = 13/124 (10%)
Query: 300 AARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIV 359
+ R GT +Y+ PE+ G +H VD W G+ YE + G PF +PS+ T R IV
Sbjct: 166 SLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIV 225
Query: 360 KKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRS 419
L FP ++DLIS LL P RL K V HP+ K A R
Sbjct: 226 NVDLKFPPFLSDG-----SKDLISKLLRYHPPQRLPLK----GVMEHPWVK----ANSRR 272
Query: 420 LTPP 423
+ PP
Sbjct: 273 VLPP 276
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 115/304 (37%), Gaps = 88/304 (28%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E I++ H + +Y + + +VMEF GG L + H R +
Sbjct: 121 EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVT---HTRMNEEQIAAVCL 177
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
VL AL LH G+I+RD+K +++L+ DG + LSDF C+
Sbjct: 178 AVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDF--GFCAQV--------------- 220
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
SK++ R VGT +++PE+
Sbjct: 221 -----------------------SKEV---------------PRRKXLVGTPYWMAPELI 242
Query: 319 SGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLR--NIVKKPLTFPTQSPSSMSEY 376
S +G VD W+ GI + EM+ G P+ NE L+ +++ L P +
Sbjct: 243 SRLPYGPEVDIWSLGIMVIEMVDGEPPYF---NEPPLKAMKMIRDNL------PPRLKNL 293
Query: 377 HA-----RDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPE--IPGMR 429
H + + LL +DP R AA++ HPF PP +P MR
Sbjct: 294 HKVSPSLKGFLDRLLVRDPAQRA----TAAELLKHPFLA--------KAGPPASIVPLMR 341
Query: 430 RQKT 433
+ +T
Sbjct: 342 QNRT 345
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 115/304 (37%), Gaps = 88/304 (28%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E I++ H + +Y + + +VMEF GG L + H R +
Sbjct: 78 EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI---VTHTRMNEEQIAAVCL 134
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
VL AL LH G+I+RD+K +++L+ DG + LSDF C+
Sbjct: 135 AVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDF--GFCAQV--------------- 177
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
SK++ R VGT +++PE+
Sbjct: 178 -----------------------SKEV---------------PRRKXLVGTPYWMAPELI 199
Query: 319 SGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLR--NIVKKPLTFPTQSPSSMSEY 376
S +G VD W+ GI + EM+ G P+ NE L+ +++ L P +
Sbjct: 200 SRLPYGPEVDIWSLGIMVIEMVDGEPPYF---NEPPLKAMKMIRDNL------PPRLKNL 250
Query: 377 HA-----RDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPE--IPGMR 429
H + + LL +DP R AA++ HPF PP +P MR
Sbjct: 251 HKVSPSLKGFLDRLLVRDPAQR----ATAAELLKHPFLAKAG--------PPASIVPLMR 298
Query: 430 RQKT 433
+ +T
Sbjct: 299 QNRT 302
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 104/272 (38%), Gaps = 67/272 (24%)
Query: 81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEK 140
D+DL + +G G G V L N+ ++ A+ + E
Sbjct: 8 DWDLVQTLGEGAYGEVQLAV--NRVTEE---------AVAVKIVDMKRAVDCPENIKKEI 56
Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
I KML+H + Y N + +E+CSGG+L +P A+ + ++
Sbjct: 57 XINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFFHQL 114
Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXR 260
+ + YLH +GI +RD+KPEN+L+ ++ +SDF L+
Sbjct: 115 MAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF------------------- 155
Query: 261 SQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG 320
+Y+ R R LN+ GT YV+PE+
Sbjct: 156 ------RYNNR-ERLLNK---------------------------MXGTLPYVAPELLKR 181
Query: 321 GS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSN 351
H VD W+ GI + M+ G P+ PS+
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 104/272 (38%), Gaps = 67/272 (24%)
Query: 81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEK 140
D+DL + +G G G V L N+ ++ A+ + E
Sbjct: 7 DWDLVQTLGEGAAGEVQLAV--NRVTEE---------AVAVKIVDMKRAVDCPENIKKEI 55
Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
I KML+H + Y N + +E+CSGG+L +P A+ + ++
Sbjct: 56 CINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFFHQL 113
Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXR 260
+ + YLH +GI +RD+KPEN+L+ ++ +SDF L+
Sbjct: 114 MAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF------------------- 154
Query: 261 SQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG 320
+Y+ R R LN+ GT YV+PE+
Sbjct: 155 ------RYNNR-ERLLNK---------------------------MCGTLPYVAPELLKR 180
Query: 321 GS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSN 351
H VD W+ GI + M+ G P+ PS+
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 113/327 (34%), Gaps = 95/327 (29%)
Query: 78 TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAE 137
DF++ R +G G G VYL R + + A+ H+
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLR 59
Query: 138 MEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYA 197
E +I L HP + LY F + +++E+
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP------------------------- 94
Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXX 257
LG +YR+L+ LS FD
Sbjct: 95 ------------LGTVYRELQK------------LSKFD--------------------- 109
Query: 258 XXRSQTYTRQYSTRLS-----RFLNRFFGSKKIQTLTPNRLFVAE------PVAARSCSF 306
R+ TY + + LS R ++R + + + L +A+ ++R
Sbjct: 110 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDL 169
Query: 307 VGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFP 366
GT +Y+ PE+ G H VD W+ G+ YE + G+ PF A + + T + I + TFP
Sbjct: 170 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 229
Query: 367 TQSPSSMSEYHARDLISGLLNKDPCNR 393
ARDLIS LL +P R
Sbjct: 230 DFVTEG-----ARDLISRLLKHNPSQR 251
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 104/274 (37%), Gaps = 67/274 (24%)
Query: 79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEM 138
D+DL + +G G G V L N+ ++ A+ +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAV--NRVTEE---------AVAVKIVDMKRAVDCPENIKK 54
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E I KML+H + Y N + +E+CSGG+L +P A+ +
Sbjct: 55 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFH 112
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
+++ + YLH +GI +RD+KPEN+L+ ++ +SDF L+
Sbjct: 113 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLAT------------------- 153
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
+Y+ R R LN+ GT YV+PE+
Sbjct: 154 ------VFRYNNR-ERLLNK---------------------------MCGTLPYVAPELL 179
Query: 319 SGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSN 351
H VD W+ GI + M+ G P+ PS+
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 104/274 (37%), Gaps = 67/274 (24%)
Query: 79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEM 138
D+DL + +G G G V L N+ ++ A+ +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAV--NRVTEE---------AVAVKIVDMKRAVDCPENIKK 53
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E I KML+H + Y N + +E+CSGG+L +P A+ +
Sbjct: 54 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFH 111
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
+++ + YLH +GI +RD+KPEN+L+ ++ +SDF L+
Sbjct: 112 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLAT------------------- 152
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
+Y+ R R LN+ GT YV+PE+
Sbjct: 153 ------VFRYNNR-ERLLNK---------------------------MCGTLPYVAPELL 178
Query: 319 SGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSN 351
H VD W+ GI + M+ G P+ PS+
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 104/274 (37%), Gaps = 67/274 (24%)
Query: 79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEM 138
D+DL + +G G G V L N+ ++ A+ +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAV--NRVTEE---------AVAVKIVDMKRAVDCPENIKK 54
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E I KML+H + Y N + +E+CSGG+L +P A+ +
Sbjct: 55 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFFH 112
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
+++ + YLH +GI +RD+KPEN+L+ ++ +SDF L+
Sbjct: 113 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLAT------------------- 153
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
+Y+ R R LN+ GT YV+PE+
Sbjct: 154 ------VFRYNNR-ERLLNK---------------------------MCGTLPYVAPELL 179
Query: 319 SGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSN 351
H VD W+ GI + M+ G P+ PS+
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 104/274 (37%), Gaps = 67/274 (24%)
Query: 79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEM 138
D+DL + +G G G V L N+ ++ A+ +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAV--NRVTEE---------AVAVKIVDMKRAVDCPENIKK 54
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E I KML+H + Y N + +E+CSGG+L +P A+ +
Sbjct: 55 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFFH 112
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
+++ + YLH +GI +RD+KPEN+L+ ++ +SDF L+
Sbjct: 113 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLAT------------------- 153
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
+Y+ R R LN+ GT YV+PE+
Sbjct: 154 ------VFRYNNR-ERLLNK---------------------------MCGTLPYVAPELL 179
Query: 319 SGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSN 351
H VD W+ GI + M+ G P+ PS+
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 104/274 (37%), Gaps = 67/274 (24%)
Query: 79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEM 138
D+DL + +G G G V L N+ ++ A+ +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAV--NRVTEE---------AVAVKIVDMKRAVDCPENIKK 54
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E I KML+H + Y N + +E+CSGG+L +P A+ +
Sbjct: 55 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFFH 112
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
+++ + YLH +GI +RD+KPEN+L+ ++ +SDF L+
Sbjct: 113 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLAT------------------- 153
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
+Y+ R R LN+ GT YV+PE+
Sbjct: 154 ------VFRYNNR-ERLLNK---------------------------MCGTLPYVAPELL 179
Query: 319 SGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSN 351
H VD W+ GI + M+ G P+ PS+
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 104/272 (38%), Gaps = 67/272 (24%)
Query: 81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEK 140
D+DL + +G G G V L N+ ++ A+ + E
Sbjct: 7 DWDLVQTLGEGAYGEVQLAV--NRVTEE---------AVAVKIVDMKRAVDCPENIKKEI 55
Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
I KML+H + Y N + +E+CSGG+L +P A+ + ++
Sbjct: 56 CINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFFHQL 113
Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXR 260
+ + YLH +GI +RD+KPEN+L+ ++ +SDF L+
Sbjct: 114 MAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF------------------- 154
Query: 261 SQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG 320
+Y+ R R LN+ GT YV+PE+
Sbjct: 155 ------RYNNR-ERLLNK---------------------------MCGTLPYVAPELLKR 180
Query: 321 GS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSN 351
H VD W+ GI + M+ G P+ PS+
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 104/272 (38%), Gaps = 67/272 (24%)
Query: 81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEK 140
D+DL + +G G G V L N+ ++ A+ + E
Sbjct: 6 DWDLVQTLGEGAYGEVQLAV--NRVTEE---------AVAVKIVDMKRAVDCPENIKKEI 54
Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
I KML+H + Y N + +E+CSGG+L +P A+ + ++
Sbjct: 55 CINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFFHQL 112
Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXR 260
+ + YLH +GI +RD+KPEN+L+ ++ +SDF L+
Sbjct: 113 MAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF------------------- 153
Query: 261 SQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG 320
+Y+ R R LN+ GT YV+PE+
Sbjct: 154 ------RYNNR-ERLLNK---------------------------MCGTLPYVAPELLKR 179
Query: 321 GS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSN 351
H VD W+ GI + M+ G P+ PS+
Sbjct: 180 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 211
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 104/272 (38%), Gaps = 67/272 (24%)
Query: 81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEK 140
D+DL + +G G G V L N+ ++ A+ + E
Sbjct: 7 DWDLVQTLGEGAYGEVQLAV--NRVTEE---------AVAVKIVDMKRAVDCPENIKKEI 55
Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
I KML+H + Y N + +E+CSGG+L +P A+ + ++
Sbjct: 56 CINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFFHQL 113
Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXR 260
+ + YLH +GI +RD+KPEN+L+ ++ +SDF L+
Sbjct: 114 MAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF------------------- 154
Query: 261 SQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG 320
+Y+ R R LN+ GT YV+PE+
Sbjct: 155 ------RYNNR-ERLLNK---------------------------MXGTLPYVAPELLKR 180
Query: 321 GS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSN 351
H VD W+ GI + M+ G P+ PS+
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 104/272 (38%), Gaps = 67/272 (24%)
Query: 81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEK 140
D+DL + +G G G V L N+ ++ A+ + E
Sbjct: 7 DWDLVQTLGEGAYGEVQLAV--NRVTEE---------AVAVKIVDMKRAVDCPENIKKEI 55
Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
I KML+H + Y N + +E+CSGG+L +P A+ + ++
Sbjct: 56 CINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFFHQL 113
Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXR 260
+ + YLH +GI +RD+KPEN+L+ ++ +SDF L+
Sbjct: 114 MAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF------------------- 154
Query: 261 SQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG 320
+Y+ R R LN+ GT YV+PE+
Sbjct: 155 ------RYNNR-ERLLNK---------------------------MXGTLPYVAPELLKR 180
Query: 321 GS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSN 351
H VD W+ GI + M+ G P+ PS+
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 104/272 (38%), Gaps = 67/272 (24%)
Query: 81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEK 140
D+DL + +G G G V L N+ ++ A+ + E
Sbjct: 8 DWDLVQTLGEGAYGEVQLAV--NRVTEE---------AVAVKIVDMKRAVDCPENIKKEI 56
Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
I KML+H + Y N + +E+CSGG+L +P A+ + ++
Sbjct: 57 CINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFFHQL 114
Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXR 260
+ + YLH +GI +RD+KPEN+L+ ++ +SDF L+
Sbjct: 115 MAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLAT--------------------- 153
Query: 261 SQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG 320
+Y+ R R LN+ GT YV+PE+
Sbjct: 154 ----VFRYNNR-ERLLNK---------------------------MCGTLPYVAPELLKR 181
Query: 321 GS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSN 351
H VD W+ GI + M+ G P+ PS+
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 104/273 (38%), Gaps = 67/273 (24%)
Query: 80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEME 139
D+DL + +G G G V L N+ ++ A+ + E
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAV--NRVTEE---------AVAVKIVDMKRAVDCPENIKKE 54
Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAE 199
I KML+H + Y N + +E+CSGG+L +P A+ + +
Sbjct: 55 ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFFHQ 112
Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXX 259
++ + YLH +GI +RD+KPEN+L+ ++ +SDF L+
Sbjct: 113 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLAT-------------------- 152
Query: 260 RSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS 319
+Y+ R R LN+ GT YV+PE+
Sbjct: 153 -----VFRYNNR-ERLLNK---------------------------MCGTLPYVAPELLK 179
Query: 320 GGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSN 351
H VD W+ GI + M+ G P+ PS+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 104/273 (38%), Gaps = 67/273 (24%)
Query: 80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEME 139
D+DL + +G G G V L N+ ++ A+ + E
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAV--NRVTEE---------AVAVKIVDMKRAVDCPENIKKE 54
Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAE 199
I KML+H + Y N + +E+CSGG+L +P A+ + +
Sbjct: 55 ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFFHQ 112
Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXX 259
++ + YLH +GI +RD+KPEN+L+ ++ +SDF L+
Sbjct: 113 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLAT-------------------- 152
Query: 260 RSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS 319
+Y+ R R LN+ GT YV+PE+
Sbjct: 153 -----VFRYNNR-ERLLNK---------------------------MCGTLPYVAPELLK 179
Query: 320 GGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSN 351
H VD W+ GI + M+ G P+ PS+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 105/271 (38%), Gaps = 66/271 (24%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E I K LD+P + + FE +F +V+E C L L HK+ K + AR++
Sbjct: 92 EIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLEL-HKR-RKAVTEPEARYFMR 149
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
+ + ++YLH +I+RDLK N+ + D + + DF L
Sbjct: 150 QTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGL--------------------- 188
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
+T++ F ++ +TL GT Y++PEV
Sbjct: 189 ----------ATKIE------FDGERKKTL------------------CGTPNYIAPEVL 214
Query: 319 SGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHA 378
H VD W+ G +Y ++ G+ PF + T I K + P S
Sbjct: 215 CKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVASA--- 271
Query: 379 RDLISGLLNKDPCNRLGSKRGAADVKTHPFF 409
LI +L+ DP R A++ T FF
Sbjct: 272 --LIRRMLHADPTLR----PSVAELLTDEFF 296
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 75/171 (43%), Gaps = 11/171 (6%)
Query: 69 ATFGRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXX 128
A +K DF++ R +G G G VYL R + + A+
Sbjct: 2 AMESKKRQWALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLE 52
Query: 129 XXXXXHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRF 188
H+ E +I L HP + LY F + +++E+ G+++ + Q +F
Sbjct: 53 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVY--KELQKLSKF 110
Query: 189 SLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL 239
Y E+ AL Y H +I+RD+KPEN+L+ S G + ++DF S+
Sbjct: 111 DEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 161
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 104/273 (38%), Gaps = 67/273 (24%)
Query: 80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEME 139
D+DL + +G G G V L N+ ++ A+ + E
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAV--NRVTEE---------AVAVKIVDMKRAVDCPENIKKE 54
Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAE 199
I KML+H + Y N + +E+CSGG+L +P A+ + +
Sbjct: 55 ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFFHQ 112
Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXX 259
++ + YLH +GI +RD+KPEN+L+ ++ +SDF L+
Sbjct: 113 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLAT-------------------- 152
Query: 260 RSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS 319
+Y+ R R LN+ GT YV+PE+
Sbjct: 153 -----VFRYNNR-ERLLNK---------------------------MCGTLPYVAPELLK 179
Query: 320 GGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSN 351
H VD W+ GI + M+ G P+ PS+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 104/273 (38%), Gaps = 67/273 (24%)
Query: 80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEME 139
D+DL + +G G G V L N+ ++ A+ + E
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAV--NRVTEE---------AVAVKIVDMKRAVDCPENIKKE 54
Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAE 199
I KML+H + Y N + +E+CSGG+L +P A+ + +
Sbjct: 55 ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFFHQ 112
Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXX 259
++ + YLH +GI +RD+KPEN+L+ ++ +SDF L+
Sbjct: 113 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLAT-------------------- 152
Query: 260 RSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS 319
+Y+ R R LN+ GT YV+PE+
Sbjct: 153 -----VFRYNNR-ERLLNK---------------------------MCGTLPYVAPELLK 179
Query: 320 GGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSN 351
H VD W+ GI + M+ G P+ PS+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 75/171 (43%), Gaps = 11/171 (6%)
Query: 69 ATFGRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXX 128
A +K DF++ R +G G G VYL R + + A+
Sbjct: 2 AMESKKRQWALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLE 52
Query: 129 XXXXXHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRF 188
H+ E +I L HP + LY F + +++E+ G+++ + Q +F
Sbjct: 53 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVY--KELQKLSKF 110
Query: 189 SLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSL 239
Y E+ AL Y H +I+RD+KPEN+L+ S G + ++DF S+
Sbjct: 111 DEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 161
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 104/273 (38%), Gaps = 67/273 (24%)
Query: 80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEME 139
D+DL + +G G G V L N+ ++ A+ + E
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAV--NRVTEE---------AVAVKIVDMKRAVDCPENIKKE 54
Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAE 199
I KML+H + Y N + +E+CSGG+L +P A+ + +
Sbjct: 55 ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFFHQ 112
Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXX 259
++ + YLH +GI +RD+KPEN+L+ ++ +SDF L+
Sbjct: 113 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF------------------ 154
Query: 260 RSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS 319
+Y+ R R LN+ GT YV+PE+
Sbjct: 155 -------RYNNR-ERLLNK---------------------------MXGTLPYVAPELLK 179
Query: 320 GGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSN 351
H VD W+ GI + M+ G P+ PS+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 104/273 (38%), Gaps = 67/273 (24%)
Query: 80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEME 139
D+DL + +G G G V L N+ ++ A+ + E
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAV--NRVTEE---------AVAVKIVDMKRAVDCPENIKKE 55
Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAE 199
I KML+H + Y N + +E+CSGG+L +P A+ + +
Sbjct: 56 ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFFHQ 113
Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXX 259
++ + YLH +GI +RD+KPEN+L+ ++ +SDF L+
Sbjct: 114 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLAT-------------------- 153
Query: 260 RSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS 319
+Y+ R R LN+ GT YV+PE+
Sbjct: 154 -----VFRYNNR-ERLLNK---------------------------MCGTLPYVAPELLK 180
Query: 320 GGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSN 351
H VD W+ GI + M+ G P+ PS+
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 76/352 (21%), Positives = 122/352 (34%), Gaps = 87/352 (24%)
Query: 82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
+D+H +G G G V+ + + G+ + M E +
Sbjct: 53 YDIHEELGTGAFGVVHRVT-----ERATGNNFAAKFVMTPHESDKET-------VRKEIQ 100
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
+ +L HP L L+ FE N ++ EF SGG+L + H + S A Y +V
Sbjct: 101 TMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFE-KVADEHNKMSEDEAVEYMRQVC 159
Query: 202 VALEYLHMLGIIYRDLKPENVL--VRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXX 259
L ++H ++ DLKPEN++ + + L DF L+ +
Sbjct: 160 KGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDP---------------- 203
Query: 260 RSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS 319
+ ++ T F A VA
Sbjct: 204 ----------------------KQSVKVTTGTAEFAAPEVA------------------E 223
Query: 320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHAR 379
G G D W+ G+ Y ++ G +PF +++ TLRN+ + S +SE +
Sbjct: 224 GKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISE-DGK 282
Query: 380 DLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEIPGMRRQ 431
D I LL DP R+ + HP+ LTP PG Q
Sbjct: 283 DFIRKLLLADPNTRMTIHQALE----HPW-----------LTPGNAPGRDSQ 319
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 99/269 (36%), Gaps = 78/269 (28%)
Query: 166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVR 225
+V E GG + L H Q K F+ A +V AL++LH GI +RDLKPEN+L
Sbjct: 88 LVFEKLQGGSI--LAHIQKQKHFNEREASRVVRDVAAALDFLHTKGIAHRDLKPENILCE 145
Query: 226 SDGH---IMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGS 282
S + + DFDL G
Sbjct: 146 SPEKVSPVKICDFDLG-----------------------------------------SGM 164
Query: 283 KKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA-----SGGSHGNAVDWWAFGIFIY 337
K + TP + P C G+ EY++PEV + D W+ G+ +Y
Sbjct: 165 KLNNSCTP----ITTPELTTPC---GSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLY 217
Query: 338 EMIYGRTPFAA---------------PSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLI 382
M+ G PF +I + FP + + +S A+DLI
Sbjct: 218 IMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISS-EAKDLI 276
Query: 383 SGLLNKDPCNRLGSKRGAADVKTHPFFKG 411
S LL +D RL AA V HP+ +G
Sbjct: 277 SKLLVRDAKQRL----SAAQVLQHPWVQG 301
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 96/243 (39%), Gaps = 63/243 (25%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E +I+K+L+HP + L+ E +VME+ SGG++ + H R AR
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFD--YLVAHGRMKEKEARAKFR 120
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
+++ A++Y H I++RDLK EN+L+ +D +I ++DF S
Sbjct: 121 QIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS-------------------- 160
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
N F K+ A P AA PE+
Sbjct: 161 ------------------NEFTFGNKLDAFCG-----APPYAA-------------PELF 184
Query: 319 SGGSH-GNAVDWWAFGIFIYEMIYGRTPFAAPS----NETTLRNIVKKPLTFPTQSPSSM 373
G + G VD W+ G+ +Y ++ G PF + E LR + P T + +
Sbjct: 185 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLL 244
Query: 374 SEY 376
++
Sbjct: 245 KKF 247
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 99/244 (40%), Gaps = 65/244 (26%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E +I+K+L+HP + L+ E +VME+ SGG++ + H R AR
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFD--YLVAHGRMKEKEARAKFR 120
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
+++ A++Y H I++RDLK EN+L+ +D +I ++DF S
Sbjct: 121 QIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS-------------------- 160
Query: 259 XRSQTYTRQYSTRLSRFLNRF-FGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV 317
N F FG+K + F P A +PE+
Sbjct: 161 ------------------NEFTFGNKLDE-------FCGSPPYA------------APEL 183
Query: 318 ASGGSH-GNAVDWWAFGIFIYEMIYGRTPFAAPS----NETTLRNIVKKPLTFPTQSPSS 372
G + G VD W+ G+ +Y ++ G PF + E LR + P T +
Sbjct: 184 FQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENL 243
Query: 373 MSEY 376
+ ++
Sbjct: 244 LKKF 247
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 110/276 (39%), Gaps = 65/276 (23%)
Query: 139 EKKILKMLDHPFLPTLYAEF-EASNFS------------CIVMEFCSGGDLHSLRHKQPH 185
E +L L+H ++ YA + E NF I ME+C G L+ L H +
Sbjct: 52 EVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENL 111
Query: 186 KRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIX 245
+ R + ++L AL Y+H GII+RDLKP N+ + ++ + DF L+
Sbjct: 112 NQQRDEYWRLFR-QILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLA------- 163
Query: 246 XXXXXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCS 305
RS + S L GS T S
Sbjct: 164 ----------KNVHRSLDILKLDSQNLP-------GSSDNLT-----------------S 189
Query: 306 FVGTHEYVSPEVASGGSHGN-AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT 364
+GT YV+ EV G H N +D ++ GI +EMIY PF+ NI+KK +
Sbjct: 190 AIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERV---NILKKLRS 243
Query: 365 FPTQSPSSMSEYH---ARDLISGLLNKDPCNRLGSK 397
+ P + + +I L++ DP R G++
Sbjct: 244 VSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGAR 279
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 95/243 (39%), Gaps = 63/243 (25%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E +I+K+L+HP + L+ E ++ME+ SGG++ + H R AR
Sbjct: 64 EVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFD--YLVAHGRMKEKEARSKFR 121
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
+++ A++Y H I++RDLK EN+L+ +D +I ++DF S
Sbjct: 122 QIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFS-------------------- 161
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
N F K+ A P AA PE+
Sbjct: 162 ------------------NEFTVGGKLDAFCG-----APPYAA-------------PELF 185
Query: 319 SGGSH-GNAVDWWAFGIFIYEMIYGRTPFAAPS----NETTLRNIVKKPLTFPTQSPSSM 373
G + G VD W+ G+ +Y ++ G PF + E LR + P T + +
Sbjct: 186 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLL 245
Query: 374 SEY 376
+
Sbjct: 246 KRF 248
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 103/273 (37%), Gaps = 67/273 (24%)
Query: 80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEME 139
D+DL + +G G G V L N+ ++ A+ + E
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAV--NRVTEE---------AVAVKIVDMKRAVDCPENIKKE 55
Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAE 199
I ML+H + Y N + +E+CSGG+L +P A+ + +
Sbjct: 56 ICINAMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFFHQ 113
Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXX 259
++ + YLH +GI +RD+KPEN+L+ ++ +SDF L+
Sbjct: 114 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLAT-------------------- 153
Query: 260 RSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS 319
+Y+ R R LN+ GT YV+PE+
Sbjct: 154 -----VFRYNNR-ERLLNK---------------------------MCGTLPYVAPELLK 180
Query: 320 GGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSN 351
H VD W+ GI + M+ G P+ PS+
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 119/290 (41%), Gaps = 70/290 (24%)
Query: 135 RAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSAR 194
R E E LK+L HP + LY +V+E+ +GG+L + KR + R
Sbjct: 55 RVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEY-AGGELFD--YIVEKKRMTEDEGR 111
Query: 195 FYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXX 254
+ +++ A+EY H I++RDLKPEN+L+ + ++ ++DF L SN +
Sbjct: 112 RFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGL---SNIMTD-------- 160
Query: 255 XXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVS 314
FL GS PN A P + Y
Sbjct: 161 ------------------GNFLKTSCGS-------PN---YAAP------EVINGKLYAG 186
Query: 315 PEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMS 374
PE VD W+ GI +Y M+ GR PF ++ + N+ KK + P +S
Sbjct: 187 PE----------VDVWSCGIVLYVMLVGRLPF----DDEFIPNLFKKVNSCVYVMPDFLS 232
Query: 375 EYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPE 424
A+ LI ++ DP R+ + +++ P+F N L L P E
Sbjct: 233 P-GAQSLIRRMIVADPMQRITIQ----EIRRDPWF---NVNLPDYLRPME 274
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 104/272 (38%), Gaps = 68/272 (25%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E I K LD+P + + FE +F +V+E C L L HK+ K + AR++
Sbjct: 76 EIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLEL-HKR-RKAVTEPEARYFMR 133
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
+ + ++YLH +I+RDLK N+ + D + + DF L
Sbjct: 134 QTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGL--------------------- 172
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTL-TPNRLFVAEPVAARSCSFVGTHEYVSPEV 317
+T++ F G +K TPN Y++PEV
Sbjct: 173 ----------ATKIE-----FDGERKKDLCGTPN--------------------YIAPEV 197
Query: 318 ASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYH 377
H VD W+ G +Y ++ G+ PF + T I K + P S
Sbjct: 198 LCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVASA-- 255
Query: 378 ARDLISGLLNKDPCNRLGSKRGAADVKTHPFF 409
LI +L+ DP R A++ T FF
Sbjct: 256 ---LIRRMLHADPTLR----PSVAELLTDEFF 280
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 102/248 (41%), Gaps = 70/248 (28%)
Query: 166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVR 225
+VME+ +GG L + + + + E L ALE+LH +I+RD+K +N+L+
Sbjct: 94 VVMEYLAGGSLTDVVTETCMDEGQIAAV---CRECLQALEFLHSNQVIHRDIKSDNILLG 150
Query: 226 SDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKI 285
DG + L+ D C+
Sbjct: 151 MDGSVKLT--DFGFCAQ------------------------------------------- 165
Query: 286 QTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTP 345
+TP + ++ + VGT +++PEV + ++G VD W+ GI EMI G P
Sbjct: 166 --ITPEQ--------SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
Query: 346 FAAPSNETTLRN--IVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAA-D 402
+ NE LR ++ T Q+P +S RD ++ L+ D KRG+A +
Sbjct: 216 YL---NENPLRALYLIATNGTPELQNPEKLSAIF-RDFLNRCLDMDV-----EKRGSAKE 266
Query: 403 VKTHPFFK 410
+ H F K
Sbjct: 267 LLQHQFLK 274
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 106/269 (39%), Gaps = 78/269 (28%)
Query: 166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVR 225
+V E GG + S HK+ H F+ A +V AL++LH GI +RDLKPEN+L
Sbjct: 88 LVFEKMRGGSILSHIHKRRH--FNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCE 145
Query: 226 SDGH---IMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGS 282
+ + DFDL G
Sbjct: 146 HPNQVSPVKICDFDLG-----------------------------------------SGI 164
Query: 283 KKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAV-----DWWAFGIFIY 337
K +P ++ P C G+ EY++PEV S ++ D W+ G+ +Y
Sbjct: 165 KLNGDCSP----ISTPELLTPC---GSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILY 217
Query: 338 EMIYGRTPF--------------AAPSNETTL-RNIVKKPLTFPTQSPSSMSEYHARDLI 382
++ G PF A P+ + L +I + FP + + +S A+DLI
Sbjct: 218 ILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHIS-CAAKDLI 276
Query: 383 SGLLNKDPCNRLGSKRGAADVKTHPFFKG 411
S LL +D RL AA V HP+ +G
Sbjct: 277 SKLLVRDAKQRL----SAAQVLQHPWVQG 301
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 104/272 (38%), Gaps = 68/272 (25%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E I K LD+P + + FE +F +V+E C L L HK+ K + AR++
Sbjct: 92 EIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLEL-HKR-RKAVTEPEARYFMR 149
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
+ + ++YLH +I+RDLK N+ + D + + DF L
Sbjct: 150 QTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGL--------------------- 188
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTL-TPNRLFVAEPVAARSCSFVGTHEYVSPEV 317
+T++ F G +K TPN Y++PEV
Sbjct: 189 ----------ATKIE-----FDGERKKDLCGTPN--------------------YIAPEV 213
Query: 318 ASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYH 377
H VD W+ G +Y ++ G+ PF + T I K + P S
Sbjct: 214 LCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVASA-- 271
Query: 378 ARDLISGLLNKDPCNRLGSKRGAADVKTHPFF 409
LI +L+ DP R A++ T FF
Sbjct: 272 ---LIRRMLHADPTLR----PSVAELLTDEFF 296
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 104/272 (38%), Gaps = 68/272 (25%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E I K LD+P + + FE +F +V+E C L L HK+ K + AR++
Sbjct: 92 EIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLEL-HKR-RKAVTEPEARYFMR 149
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
+ + ++YLH +I+RDLK N+ + D + + DF L
Sbjct: 150 QTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGL--------------------- 188
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGS-KKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV 317
+T++ F G KK TPN Y++PEV
Sbjct: 189 ----------ATKIE-----FDGERKKXLCGTPN--------------------YIAPEV 213
Query: 318 ASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYH 377
H VD W+ G +Y ++ G+ PF + T I K + P S
Sbjct: 214 LCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVASA-- 271
Query: 378 ARDLISGLLNKDPCNRLGSKRGAADVKTHPFF 409
LI +L+ DP R A++ T FF
Sbjct: 272 ---LIRRMLHADPTLR----PSVAELLTDEFF 296
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 101/248 (40%), Gaps = 70/248 (28%)
Query: 166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVR 225
+VME+ +GG L + + + + E L ALE+LH +I+RD+K +N+L+
Sbjct: 94 VVMEYLAGGSLTDVVTETCMDEGQIAAV---CRECLQALEFLHSNQVIHRDIKSDNILLG 150
Query: 226 SDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKI 285
DG + L+ D C+
Sbjct: 151 MDGSVKLT--DFGFCAQ------------------------------------------- 165
Query: 286 QTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTP 345
+TP + ++ VGT +++PEV + ++G VD W+ GI EMI G P
Sbjct: 166 --ITPEQ--------SKRSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
Query: 346 FAAPSNETTLRN--IVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAA-D 402
+ NE LR ++ T Q+P +S RD ++ L+ D KRG+A +
Sbjct: 216 YL---NENPLRALYLIATNGTPELQNPEKLSAIF-RDFLNRCLDMDV-----EKRGSAKE 266
Query: 403 VKTHPFFK 410
+ H F K
Sbjct: 267 LLQHQFLK 274
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 58/105 (55%), Gaps = 5/105 (4%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E ++LK LDHP + L+ E S+ IV E +GG+L K+ KRFS A
Sbjct: 71 EVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKR--KRFSEHDAARIIK 128
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRS---DGHIMLSDFDLSLC 240
+V + Y+H I++RDLKPEN+L+ S D I + DF LS C
Sbjct: 129 QVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTC 173
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 48/104 (46%), Gaps = 6/104 (5%)
Query: 307 VGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFP 366
+GT Y++PEV G ++ D W+ G+ +Y ++ G PF + L+ + F
Sbjct: 184 IGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFD 242
Query: 367 TQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
++S+ A+DLI +L P R+ A HP+ +
Sbjct: 243 LPQWRTISD-DAKDLIRKMLTFHPSLRI----TATQCLEHPWIQ 281
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 58/105 (55%), Gaps = 5/105 (4%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E ++LK LDHP + L+ E S+ IV E +GG+L K+ KRFS A
Sbjct: 71 EVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKR--KRFSEHDAARIIK 128
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRS---DGHIMLSDFDLSLC 240
+V + Y+H I++RDLKPEN+L+ S D I + DF LS C
Sbjct: 129 QVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTC 173
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 48/104 (46%), Gaps = 6/104 (5%)
Query: 307 VGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFP 366
+GT Y++PEV G ++ D W+ G+ +Y ++ G PF + L+ + F
Sbjct: 184 IGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFD 242
Query: 367 TQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
++S+ A+DLI +L P R+ A HP+ +
Sbjct: 243 LPQWRTISD-DAKDLIRKMLTFHPSLRI----TATQCLEHPWIQ 281
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 58/105 (55%), Gaps = 5/105 (4%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E ++LK LDHP + L+ E S+ IV E +GG+L K+ KRFS A
Sbjct: 71 EVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKR--KRFSEHDAARIIK 128
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRS---DGHIMLSDFDLSLC 240
+V + Y+H I++RDLKPEN+L+ S D I + DF LS C
Sbjct: 129 QVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTC 173
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 48/104 (46%), Gaps = 6/104 (5%)
Query: 307 VGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFP 366
+GT Y++PEV G ++ D W+ G+ +Y ++ G PF + L+ + F
Sbjct: 184 IGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFD 242
Query: 367 TQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
++S+ A+DLI +L P R+ A HP+ +
Sbjct: 243 LPQWRTISD-DAKDLIRKMLTFHPSLRI----TATQCLEHPWIQ 281
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 114/304 (37%), Gaps = 88/304 (28%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E I++ H + +Y + + +VMEF GG L + H R +
Sbjct: 67 EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI---VTHTRMNEEQIAAVCL 123
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
VL AL LH G+I+RD+K +++L+ DG + LSDF C+
Sbjct: 124 AVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDF--GFCA----------------- 164
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
Q S + R + V P +++PE+
Sbjct: 165 --------QVSKEVPR----------------RKXLVGTPY------------WMAPELI 188
Query: 319 SGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLR--NIVKKPLTFPTQSPSSMSEY 376
S +G VD W+ GI + EM+ G P+ NE L+ +++ L P +
Sbjct: 189 SRLPYGPEVDIWSLGIMVIEMVDGEPPYF---NEPPLKAMKMIRDNL------PPRLKNL 239
Query: 377 HA-----RDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPE--IPGMR 429
H + + LL +DP R AA++ HPF PP +P MR
Sbjct: 240 HKVSPSLKGFLDRLLVRDPAQR----ATAAELLKHPFLAKAG--------PPASIVPLMR 287
Query: 430 RQKT 433
+ +T
Sbjct: 288 QNRT 291
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 100/248 (40%), Gaps = 70/248 (28%)
Query: 166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVR 225
+VME+ +GG L + + + + E L ALE+LH +I+RD+K +N+L+
Sbjct: 94 VVMEYLAGGSLTDVVTETCMDEGQIAAV---CRECLQALEFLHSNQVIHRDIKSDNILLG 150
Query: 226 SDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKI 285
DG + L+ D C+
Sbjct: 151 MDGSVKLT--DFGFCAQ------------------------------------------- 165
Query: 286 QTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTP 345
+TP + ++ VGT +++PEV + ++G VD W+ GI EMI G P
Sbjct: 166 --ITPEQ--------SKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
Query: 346 FAAPSNETTLRN--IVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAA-D 402
+ NE LR ++ T Q+P +S RD ++ L D KRG+A +
Sbjct: 216 YL---NENPLRALYLIATNGTPELQNPEKLSAIF-RDFLNRCLEMDV-----EKRGSAKE 266
Query: 403 VKTHPFFK 410
+ H F K
Sbjct: 267 LLQHQFLK 274
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 100/248 (40%), Gaps = 70/248 (28%)
Query: 166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVR 225
+VME+ +GG L + + + + E L ALE+LH +I+RD+K +N+L+
Sbjct: 95 VVMEYLAGGSLTDVVTETCMDEGQIAAV---CRECLQALEFLHSNQVIHRDIKSDNILLG 151
Query: 226 SDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKI 285
DG + L+ D C+
Sbjct: 152 MDGSVKLT--DFGFCAQ------------------------------------------- 166
Query: 286 QTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTP 345
+TP + ++ VGT +++PEV + ++G VD W+ GI EMI G P
Sbjct: 167 --ITPEQ--------SKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
Query: 346 FAAPSNETTLRN--IVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAA-D 402
+ NE LR ++ T Q+P +S RD ++ L D KRG+A +
Sbjct: 217 YL---NENPLRALYLIATNGTPELQNPEKLSAIF-RDFLNRCLEMDV-----EKRGSAKE 267
Query: 403 VKTHPFFK 410
+ H F K
Sbjct: 268 LIQHQFLK 275
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 114/304 (37%), Gaps = 88/304 (28%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E I++ H + +Y + + +VMEF GG L + H R +
Sbjct: 71 EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI---VTHTRMNEEQIAAVCL 127
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
VL AL LH G+I+RD+K +++L+ DG + LSDF C+
Sbjct: 128 AVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDF--GFCA----------------- 168
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
Q S + R + V P +++PE+
Sbjct: 169 --------QVSKEVPR----------------RKXLVGTPY------------WMAPELI 192
Query: 319 SGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLR--NIVKKPLTFPTQSPSSMSEY 376
S +G VD W+ GI + EM+ G P+ NE L+ +++ L P +
Sbjct: 193 SRLPYGPEVDIWSLGIMVIEMVDGEPPYF---NEPPLKAMKMIRDNL------PPRLKNL 243
Query: 377 HA-----RDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPE--IPGMR 429
H + + LL +DP R AA++ HPF PP +P MR
Sbjct: 244 HKVSPSLKGFLDRLLVRDPAQR----ATAAELLKHPFLA--------KAGPPASIVPLMR 291
Query: 430 RQKT 433
+ +T
Sbjct: 292 QNRT 295
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 54/106 (50%), Gaps = 11/106 (10%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHS---LRHKQPHKRFSLTSARF 195
E +LK LDHP + LY FE +VME GG+L LR K FS A
Sbjct: 54 EVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQK-----FSEVDAAV 108
Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLVRS---DGHIMLSDFDLS 238
+VL YLH I++RDLKPEN+L+ S D I + DF LS
Sbjct: 109 IMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLS 154
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 52/112 (46%), Gaps = 6/112 (5%)
Query: 298 PVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRN 357
V + +GT Y++PEV + D W+ G+ +Y ++ G PF +++ L+
Sbjct: 158 EVGGKMKERLGTAYYIAPEVLRK-KYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKR 216
Query: 358 IVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFF 409
+ K +F + +S+ A+ L+ +L +P R+ A + HP+
Sbjct: 217 VEKGKFSFDPPDWTQVSD-EAKQLVKLMLTYEPSKRI----SAEEALNHPWI 263
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 109/276 (39%), Gaps = 65/276 (23%)
Query: 139 EKKILKMLDHPFLPTLYAEF-EASNFS------------CIVMEFCSGGDLHSLRHKQPH 185
E +L L+H ++ YA + E NF I ME+C L+ L H +
Sbjct: 52 EVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENL 111
Query: 186 KRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIX 245
+ R + ++L AL Y+H GII+RDLKP N+ + ++ + DF L+
Sbjct: 112 NQQRDEYWRLFR-QILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLA------- 163
Query: 246 XXXXXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCS 305
RS + S L GS T S
Sbjct: 164 ----------KNVHRSLDILKLDSQNLP-------GSSDNLT-----------------S 189
Query: 306 FVGTHEYVSPEVASGGSHGN-AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT 364
+GT YV+ EV G H N +D ++ GI +EMIY PF+ NI+KK +
Sbjct: 190 AIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERV---NILKKLRS 243
Query: 365 FPTQSPSSMSEYH---ARDLISGLLNKDPCNRLGSK 397
+ P + + +I L++ DP R G++
Sbjct: 244 VSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGAR 279
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 107/277 (38%), Gaps = 68/277 (24%)
Query: 135 RAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSAR 194
+ + E + LK+ HP + LY +VME+ SGG+L K H R AR
Sbjct: 57 KIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICK--HGRVEEMEAR 114
Query: 195 FYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS-LCSNAIXXXXXXXXX 253
++L A++Y H +++RDLKPENVL+ + + ++DF LS + S+
Sbjct: 115 RLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG---------- 164
Query: 254 XXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYV 313
FL GS PN E ++ R Y
Sbjct: 165 --------------------EFLRTSCGS-------PNYA-APEVISGRL--------YA 188
Query: 314 SPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSM 373
PE VD W+ G+ +Y ++ G PF T + I P S+
Sbjct: 189 GPE----------VDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSV 238
Query: 374 SEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
+ L+ +L DP R K D++ H +FK
Sbjct: 239 AT-----LLMHMLQVDPLKRATIK----DIREHEWFK 266
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 54/106 (50%), Gaps = 11/106 (10%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHS---LRHKQPHKRFSLTSARF 195
E +LK LDHP + LY FE +VME GG+L LR K FS A
Sbjct: 71 EVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQK-----FSEVDAAV 125
Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLVRS---DGHIMLSDFDLS 238
+VL YLH I++RDLKPEN+L+ S D I + DF LS
Sbjct: 126 IMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLS 171
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 52/111 (46%), Gaps = 6/111 (5%)
Query: 299 VAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNI 358
V + +GT Y++PEV + D W+ G+ +Y ++ G PF +++ L+ +
Sbjct: 176 VGGKMKERLGTAYYIAPEVLRK-KYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRV 234
Query: 359 VKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFF 409
K +F + +S+ A+ L+ +L +P R+ A + HP+
Sbjct: 235 EKGKFSFDPPDWTQVSD-EAKQLVKLMLTYEPSKRI----SAEEALNHPWI 280
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 107/277 (38%), Gaps = 68/277 (24%)
Query: 135 RAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSAR 194
+ + E + LK+ HP + LY +VME+ SGG+L K H R AR
Sbjct: 57 KIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICK--HGRVEEMEAR 114
Query: 195 FYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS-LCSNAIXXXXXXXXX 253
++L A++Y H +++RDLKPENVL+ + + ++DF LS + S+
Sbjct: 115 RLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG---------- 164
Query: 254 XXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYV 313
FL GS PN E ++ R Y
Sbjct: 165 --------------------EFLRDSCGS-------PNYA-APEVISGRL--------YA 188
Query: 314 SPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSM 373
PE VD W+ G+ +Y ++ G PF T + I P S+
Sbjct: 189 GPE----------VDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSV 238
Query: 374 SEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
+ L+ +L DP R K D++ H +FK
Sbjct: 239 AT-----LLMHMLQVDPLKRATIK----DIREHEWFK 266
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 119/338 (35%), Gaps = 88/338 (26%)
Query: 81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEK 140
DF+ +GAG+ G V+ S H+P L M ++ E
Sbjct: 26 DFEKISELGAGNGGVVFKVS----------HKPSGL-VMARKLIHLEIKPAIRNQIIREL 74
Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQ---PHKRFSLTSARFYA 197
++L + P++ Y F + I ME GG L + K P + S
Sbjct: 75 QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSI---- 130
Query: 198 AEVLVALEYL-HMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXX 256
V+ L YL I++RD+KP N+LV S G ++ LC +
Sbjct: 131 -AVIKGLTYLREKHKIMHRDVKPSNILVNSRG-------EIKLCDFGVS----------- 171
Query: 257 XXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE 316
+ + + + SFVGT Y+SPE
Sbjct: 172 ---------------------------------------GQLIDSMANSFVGTRSYMSPE 192
Query: 317 VASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETT----LRNIVKKPLTFPTQSPSS 372
G + D W+ G+ + EM GR P + S L IV +P P + PS
Sbjct: 193 RLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEP---PPKLPSG 249
Query: 373 MSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
+ +D ++ L K+P R K+ + H F K
Sbjct: 250 VFSLEFQDFVNKCLIKNPAERADLKQ----LMVHAFIK 283
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 101/248 (40%), Gaps = 70/248 (28%)
Query: 166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVR 225
+VME+ +GG L + + + + E L ALE+LH +I+R++K +N+L+
Sbjct: 95 VVMEYLAGGSLTDVVTETCMDEGQIAAV---CRECLQALEFLHSNQVIHRNIKSDNILLG 151
Query: 226 SDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKI 285
DG + L+ D C+
Sbjct: 152 MDGSVKLT--DFGFCAQ------------------------------------------- 166
Query: 286 QTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTP 345
+TP + ++ + VGT +++PEV + ++G VD W+ GI EMI G P
Sbjct: 167 --ITPEQ--------SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
Query: 346 FAAPSNETTLRN--IVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAA-D 402
+ NE LR ++ T Q+P +S RD ++ L D KRG+A +
Sbjct: 217 YL---NENPLRALYLIATNGTPELQNPEKLSAIF-RDFLNRCLEMDV-----EKRGSAKE 267
Query: 403 VKTHPFFK 410
+ H F K
Sbjct: 268 LIQHQFLK 275
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 94/243 (38%), Gaps = 63/243 (25%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E +I K+L+HP + L+ E +V E+ SGG++ + H R AR
Sbjct: 63 EVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFD--YLVAHGRXKEKEARAKFR 120
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
+++ A++Y H I++RDLK EN+L+ +D +I ++DF S
Sbjct: 121 QIVSAVQYCHQKFIVHRDLKAENLLLDADXNIKIADFGFS-------------------- 160
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
N F K+ A P AA PE+
Sbjct: 161 ------------------NEFTFGNKLDAFCG-----APPYAA-------------PELF 184
Query: 319 SGGSH-GNAVDWWAFGIFIYEMIYGRTPFAAPS----NETTLRNIVKKPLTFPTQSPSSM 373
G + G VD W+ G+ +Y ++ G PF + E LR + P T + +
Sbjct: 185 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYXSTDCENLL 244
Query: 374 SEY 376
++
Sbjct: 245 KKF 247
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 105/269 (39%), Gaps = 78/269 (28%)
Query: 166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVR 225
+V E GG + S HK+ H F+ A +V AL++LH GI +RDLKPEN+L
Sbjct: 88 LVFEKMRGGSILSHIHKRRH--FNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCE 145
Query: 226 SDGH---IMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGS 282
+ + DF L G
Sbjct: 146 HPNQVSPVKICDFGLG-----------------------------------------SGI 164
Query: 283 KKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAV-----DWWAFGIFIY 337
K +P ++ P C G+ EY++PEV S ++ D W+ G+ +Y
Sbjct: 165 KLNGDCSP----ISTPELLTPC---GSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILY 217
Query: 338 EMIYGRTPF--------------AAPSNETTL-RNIVKKPLTFPTQSPSSMSEYHARDLI 382
++ G PF A P+ + L +I + FP + + +S A+DLI
Sbjct: 218 ILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHIS-CAAKDLI 276
Query: 383 SGLLNKDPCNRLGSKRGAADVKTHPFFKG 411
S LL +D RL AA V HP+ +G
Sbjct: 277 SKLLVRDAKQRL----SAAQVLQHPWVQG 301
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 110/282 (39%), Gaps = 69/282 (24%)
Query: 138 MEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYA 197
+E +IL DHP++ L + I++EFC GG + ++ + + + +
Sbjct: 65 VEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIML-ELDRGLTEPQIQVVC 123
Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXX 257
++L AL +LH II+RDLK NVL+ +G I L+DF +S
Sbjct: 124 RQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVS------------------- 164
Query: 258 XXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV 317
+K ++TL + SF+GT +++PEV
Sbjct: 165 ------------------------AKNLKTLQ------------KRDSFIGTPYWMAPEV 188
Query: 318 ASGGSHGNA-----VDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK-KPLTFPTQSPS 371
+ + D W+ GI + EM P + L I K P T T S
Sbjct: 189 VMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKW 248
Query: 372 SMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLN 413
S+ RD + L+K+P R AA + HPF +
Sbjct: 249 SV---EFRDFLKIALDKNPETR----PSAAQLLEHPFVSSIT 283
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 87/362 (24%), Positives = 125/362 (34%), Gaps = 97/362 (26%)
Query: 78 TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAE 137
+ +F +IG G G VY K R E L + A
Sbjct: 2 SMENFQKVEKIGEGTYGVVY------KARNKLTGEVVALKKIRLDTETEGVPST----AI 51
Query: 138 MEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYA 197
E +LK L+HP + L N +V EF S DL L + Y
Sbjct: 52 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKKFMDASALTGIPLPLIKSYL 110
Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXX 257
++L L + H +++RDLKPEN+L+ ++G I L+DF L+
Sbjct: 111 FQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLA------------------- 151
Query: 258 XXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV 317
R FG P R + E V T Y +PE+
Sbjct: 152 --------------------RAFG-------VPVRTYXHEVV---------TLWYRAPEI 175
Query: 318 ASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK---------------- 360
G + AVD W+ G EM+ R F S L I +
Sbjct: 176 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 235
Query: 361 ---KPLTFPTQSPSSMSEY------HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG 411
KP +FP + S+ R L+S +L+ DP R+ +K A HPFF+
Sbjct: 236 PDYKP-SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQD 290
Query: 412 LN 413
+
Sbjct: 291 VT 292
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 87/362 (24%), Positives = 125/362 (34%), Gaps = 97/362 (26%)
Query: 78 TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAE 137
+ +F +IG G G VY K R E L + A
Sbjct: 4 SMENFQKVEKIGEGTYGVVY------KARNKLTGEVVALKKIRLDTETEGVPST----AI 53
Query: 138 MEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYA 197
E +LK L+HP + L N +V EF S DL L + Y
Sbjct: 54 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKKFMDASALTGIPLPLIKSYL 112
Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXX 257
++L L + H +++RDLKPEN+L+ ++G I L+DF L+
Sbjct: 113 FQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLA------------------- 153
Query: 258 XXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV 317
R FG P R + E V T Y +PE+
Sbjct: 154 --------------------RAFG-------VPVRTYXHE---------VVTLWYRAPEI 177
Query: 318 ASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK---------------- 360
G + AVD W+ G EM+ R F S L I +
Sbjct: 178 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 237
Query: 361 ---KPLTFPTQSPSSMSEY------HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG 411
KP +FP + S+ R L+S +L+ DP R+ +K A HPFF+
Sbjct: 238 PDYKP-SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQD 292
Query: 412 LN 413
+
Sbjct: 293 VT 294
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 110/282 (39%), Gaps = 69/282 (24%)
Query: 138 MEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYA 197
+E +IL DHP++ L + I++EFC GG + ++ + + + +
Sbjct: 57 VEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIML-ELDRGLTEPQIQVVC 115
Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXX 257
++L AL +LH II+RDLK NVL+ +G I L+DF +S
Sbjct: 116 RQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVS------------------- 156
Query: 258 XXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV 317
+K ++TL + SF+GT +++PEV
Sbjct: 157 ------------------------AKNLKTLQ------------KRDSFIGTPYWMAPEV 180
Query: 318 ASGGSHGNA-----VDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK-KPLTFPTQSPS 371
+ + D W+ GI + EM P + L I K P T T S
Sbjct: 181 VMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKW 240
Query: 372 SMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLN 413
S+ RD + L+K+P R AA + HPF +
Sbjct: 241 SV---EFRDFLKIALDKNPETR----PSAAQLLEHPFVSSIT 275
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 118/300 (39%), Gaps = 85/300 (28%)
Query: 139 EKKILKMLDHPFLPTLY----AEFEASNFSCIVMEFCSGGDLHSLRHKQ----PHKRFSL 190
E + L+HP + +Y AE A IVME+ G L + H + P + +
Sbjct: 62 EAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEV 121
Query: 191 TSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXX 250
A+ AL + H GII+RD+KP N+++ + + + DF + + AI
Sbjct: 122 I------ADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGI---ARAIADS--- 169
Query: 251 XXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTH 310
G+ QT + +GT
Sbjct: 170 ------------------------------GNSVTQT----------------AAVIGTA 183
Query: 311 EYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPS-NETTLRNIVKKPLTFPTQS 369
+Y+SPE A G S D ++ G +YE++ G PF S + +++ + P+
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQHVREDPI-----P 238
Query: 370 PSSMSEYHARDLISGLLN---KDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEIP 426
PS+ E + DL + +L K+P NR + AA+++ + + + PPE P
Sbjct: 239 PSARHEGLSADLDAVVLKALAKNPENRYQT---AAEMRA-------DLVRVHNGEPPEAP 288
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 125/362 (34%), Gaps = 97/362 (26%)
Query: 78 TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAE 137
+ +F +IG G G VY K R E L + A
Sbjct: 4 SMENFQKVEKIGEGTYGVVY------KARNKLTGEVVALKKIRLDTETEGVPST----AI 53
Query: 138 MEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYA 197
E +LK L+HP + L N +V EF S DL L + Y
Sbjct: 54 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYL 112
Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXX 257
++L L + H +++RDLKP+N+L+ ++G I L+DF L+
Sbjct: 113 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA------------------- 153
Query: 258 XXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV 317
R FG P R + E V T Y +PE+
Sbjct: 154 --------------------RAFG-------VPVRTYXHE---------VVTLWYRAPEI 177
Query: 318 ASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK---------------- 360
G + AVD W+ G EM+ R F S L I +
Sbjct: 178 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 237
Query: 361 ---KPLTFPTQSPSSMSEY------HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG 411
KP +FP + S+ R L+S +L+ DP R+ +K A HPFF+
Sbjct: 238 PDYKP-SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQD 292
Query: 412 LN 413
+
Sbjct: 293 VT 294
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 125/362 (34%), Gaps = 97/362 (26%)
Query: 78 TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAE 137
+ +F +IG G G VY K R E L + A
Sbjct: 3 SMENFQKVEKIGEGTYGVVY------KARNKLTGEVVALKKIRLDTETEGVPST----AI 52
Query: 138 MEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYA 197
E +LK L+HP + L N +V EF S DL L + Y
Sbjct: 53 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYL 111
Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXX 257
++L L + H +++RDLKP+N+L+ ++G I L+DF L+
Sbjct: 112 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA------------------- 152
Query: 258 XXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV 317
R FG P R + E V T Y +PE+
Sbjct: 153 --------------------RAFG-------VPVRTYXHEVV---------TLWYRAPEI 176
Query: 318 ASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK---------------- 360
G + AVD W+ G EM+ R F S L I +
Sbjct: 177 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 236
Query: 361 ---KPLTFPTQSPSSMSEY------HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG 411
KP +FP + S+ R L+S +L+ DP R+ +K A HPFF+
Sbjct: 237 PDYKP-SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQD 291
Query: 412 LN 413
+
Sbjct: 292 VT 293
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 103/278 (37%), Gaps = 72/278 (25%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARF--Y 196
E IL + H + L+ FE+ ++ EF SG D+ + F L Y
Sbjct: 51 EISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFE---RINTSAFELNEREIVSY 107
Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXX 256
+V AL++LH I + D++PEN++
Sbjct: 108 VHQVCEALQFLHSHNIGHFDIRPENII--------------------------------- 134
Query: 257 XXXRSQTYTRQYSTRLSRFLNRF-FGSKKIQTLTPN---RLFVAEPVAARSCSFVGTHEY 312
Y TR S + FG + L P RL P EY
Sbjct: 135 -----------YQTRRSSTIKIIEFGQAR--QLKPGDNFRLLFTAP------------EY 169
Query: 313 VSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSS 372
+PEV A D W+ G +Y ++ G PF A +N+ + NI+ TF ++
Sbjct: 170 YAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKE 229
Query: 373 MSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
+S A D + LL K+ +R+ A++ HP+ K
Sbjct: 230 IS-IEAMDFVDRLLVKERKSRM----TASEALQHPWLK 262
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 117/300 (39%), Gaps = 85/300 (28%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASN----FSCIVMEFCSGGDLHSLRHKQ----PHKRFSL 190
E + L+HP + +YA EA IVME+ G L + H + P + +
Sbjct: 62 EAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEV 121
Query: 191 TSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXX 250
A+ AL + H GII+RD+KP N+++ + + + DF + + AI
Sbjct: 122 I------ADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGI---ARAIADS--- 169
Query: 251 XXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTH 310
G+ QT + +GT
Sbjct: 170 ------------------------------GNSVTQT----------------AAVIGTA 183
Query: 311 EYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSN-ETTLRNIVKKPLTFPTQS 369
+Y+SPE A G S D ++ G +YE++ G PF S +++ + P+
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPI-----P 238
Query: 370 PSSMSEYHARDLISGLLN---KDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEIP 426
PS+ E + DL + +L K+P NR + AA+++ + + + PPE P
Sbjct: 239 PSARHEGLSADLDAVVLKALAKNPENRYQT---AAEMRA-------DLVRVHNGEPPEAP 288
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 124/362 (34%), Gaps = 97/362 (26%)
Query: 78 TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAE 137
+ +F +IG G G VY K R E L + A
Sbjct: 2 SMENFQKVEKIGEGTYGVVY------KARNKLTGEVVALKKIRLDTETEGVPST----AI 51
Query: 138 MEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYA 197
E +LK L+HP + L N +V EF DL L + Y
Sbjct: 52 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYL 110
Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXX 257
++L L + H +++RDLKPEN+L+ ++G I L+DF L+
Sbjct: 111 FQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLA------------------- 151
Query: 258 XXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV 317
R FG P R + E V T Y +PE+
Sbjct: 152 --------------------RAFG-------VPVRTYXHEVV---------TLWYRAPEI 175
Query: 318 ASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK---------------- 360
G + AVD W+ G EM+ R F S L I +
Sbjct: 176 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 235
Query: 361 ---KPLTFPTQSPSSMSEY------HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG 411
KP +FP + S+ R L+S +L+ DP R+ +K A HPFF+
Sbjct: 236 PDYKP-SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQD 290
Query: 412 LN 413
+
Sbjct: 291 VT 292
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 124/362 (34%), Gaps = 97/362 (26%)
Query: 78 TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAE 137
+ +F +IG G G VY K R E L + A
Sbjct: 1 SMENFQKVEKIGEGTYGVVY------KARNKLTGEVVALKKIRLDTETEGVPST----AI 50
Query: 138 MEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYA 197
E +LK L+HP + L N +V EF DL L + Y
Sbjct: 51 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKDFMDASALTGIPLPLIKSYL 109
Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXX 257
++L L + H +++RDLKPEN+L+ ++G I L+DF L+
Sbjct: 110 FQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLA------------------- 150
Query: 258 XXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV 317
R FG P R + E V T Y +PE+
Sbjct: 151 --------------------RAFG-------VPVRTYXHE---------VVTLWYRAPEI 174
Query: 318 ASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK---------------- 360
G + AVD W+ G EM+ R F S L I +
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 234
Query: 361 ---KPLTFPTQSPSSMSEY------HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG 411
KP +FP + S+ R L+S +L+ DP R+ +K A HPFF+
Sbjct: 235 PDYKP-SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQD 289
Query: 412 LN 413
+
Sbjct: 290 VT 291
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 124/362 (34%), Gaps = 97/362 (26%)
Query: 78 TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAE 137
+ +F +IG G G VY K R E L + A
Sbjct: 3 SMENFQKVEKIGEGTYGVVY------KARNKLTGEVVALKKIRLDTETEGVPST----AI 52
Query: 138 MEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYA 197
E +LK L+HP + L N +V EF DL L + Y
Sbjct: 53 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYL 111
Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXX 257
++L L + H +++RDLKPEN+L+ ++G I L+DF L+
Sbjct: 112 FQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLA------------------- 152
Query: 258 XXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV 317
R FG P R + E V T Y +PE+
Sbjct: 153 --------------------RAFG-------VPVRTYXHE---------VVTLWYRAPEI 176
Query: 318 ASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK---------------- 360
G + AVD W+ G EM+ R F S L I +
Sbjct: 177 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 236
Query: 361 ---KPLTFPTQSPSSMSEY------HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG 411
KP +FP + S+ R L+S +L+ DP R+ +K A HPFF+
Sbjct: 237 PDYKP-SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQD 291
Query: 412 LN 413
+
Sbjct: 292 VT 293
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 120/320 (37%), Gaps = 74/320 (23%)
Query: 76 GLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHR 135
G ++ + + +G G G V L Y G + A+ R
Sbjct: 9 GAHIGNYQIVKTLGEGSFGKVKLA-----YHTTTGQK----VALKIINKKVLAKSDMQGR 59
Query: 136 AEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARF 195
E E L++L HP + LY ++ + +V+E+ +G +L + + S AR
Sbjct: 60 IEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY-AGNELFD--YIVQRDKMSEQEARR 116
Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXX 255
+ +++ A+EY H I++RDLKPEN+L+ ++ ++DF L SN +
Sbjct: 117 FFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGL---SNIMTD--------- 164
Query: 256 XXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP 315
FL GS PN A P + Y P
Sbjct: 165 -----------------GNFLKTSCGS-------PN---YAAP------EVISGKLYAGP 191
Query: 316 EVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPT-QSPSSMS 374
E VD W+ G+ +Y M+ R PF S +NI T P SP
Sbjct: 192 E----------VDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPG--- 238
Query: 375 EYHARDLISGLLNKDPCNRL 394
A LI +L +P NR+
Sbjct: 239 ---AAGLIKRMLIVNPLNRI 255
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 120/320 (37%), Gaps = 74/320 (23%)
Query: 76 GLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHR 135
G ++ + + +G G G V L Y G + A+ R
Sbjct: 10 GAHIGNYQIVKTLGEGSFGKVKLA-----YHTTTGQK----VALKIINKKVLAKSDMQGR 60
Query: 136 AEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARF 195
E E L++L HP + LY ++ + +V+E+ +G +L + + S AR
Sbjct: 61 IEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY-AGNELFD--YIVQRDKMSEQEARR 117
Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXX 255
+ +++ A+EY H I++RDLKPEN+L+ ++ ++DF L SN +
Sbjct: 118 FFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGL---SNIMTD--------- 165
Query: 256 XXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP 315
FL GS PN A P + Y P
Sbjct: 166 -----------------GNFLKTSCGS-------PN---YAAP------EVISGKLYAGP 192
Query: 316 EVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPT-QSPSSMS 374
E VD W+ G+ +Y M+ R PF S +NI T P SP
Sbjct: 193 E----------VDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPG--- 239
Query: 375 EYHARDLISGLLNKDPCNRL 394
A LI +L +P NR+
Sbjct: 240 ---AAGLIKRMLIVNPLNRI 256
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 119/341 (34%), Gaps = 88/341 (25%)
Query: 81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEK 140
DF+ +GAG+ G V+ S H+P L M ++ E
Sbjct: 7 DFEKISELGAGNGGVVFKVS----------HKPSGL-VMARKLIHLEIKPAIRNQIIREL 55
Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
++L + P++ Y F + I ME GG L + K R + V
Sbjct: 56 QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAV 113
Query: 201 LVALEYL-HMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXX 259
+ L YL I++RD+KP N+LV S G ++ LC
Sbjct: 114 IKGLTYLREKHKIMHRDVKPSNILVNSRG-------EIKLCD------------------ 148
Query: 260 RSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS 319
FG + + + + SFVGT Y+SPE
Sbjct: 149 --------------------FGVS------------GQLIDSMANSFVGTRSYMSPERLQ 176
Query: 320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETT----------LRNIVKKPLTFPTQS 369
G + D W+ G+ + EM GR P P + L IV +P P +
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYIVNEP---PPKL 233
Query: 370 PSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
PS + +D ++ L K+P R K+ + H F K
Sbjct: 234 PSGVFSLEFQDFVNKCLIKNPAERADLKQ----LMVHAFIK 270
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 82/206 (39%), Gaps = 57/206 (27%)
Query: 144 KMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSL-RHKQPHKRFSLTSARFYAAEVLV 202
K L H + F + F I ME GG L +L R K + + + FY ++L
Sbjct: 74 KHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILE 133
Query: 203 ALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQ 262
L+YLH I++RD+K +NVL+ +
Sbjct: 134 GLKYLHDNQIVHRDIKGDNVLINT------------------------------------ 157
Query: 263 TYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGG- 321
YS L ++ F SK++ + P + +F GT +Y++PE+ G
Sbjct: 158 -----YSGVLK--ISDFGTSKRLAGINPC-----------TETFTGTLQYMAPEIIDKGP 199
Query: 322 -SHGNAVDWWAFGIFIYEMIYGRTPF 346
+G A D W+ G I EM G+ PF
Sbjct: 200 RGYGKAADIWSLGCTIIEMATGKPPF 225
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 106/274 (38%), Gaps = 70/274 (25%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E + LK+ HP + LY + +VME+ SGG+L K + R +R
Sbjct: 66 EIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICK--NGRLDEKESRRLFQ 123
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS-LCSNAIXXXXXXXXXXXXX 257
++L ++Y H +++RDLKPENVL+ + + ++DF LS + S+
Sbjct: 124 QILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG-------------- 169
Query: 258 XXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV 317
FL GS PN A P + Y PE
Sbjct: 170 ----------------EFLRXSCGS-------PN---YAAP------EVISGRLYAGPE- 196
Query: 318 ASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQ-SPSSMSEY 376
VD W+ G+ +Y ++ G PF T + I P +PS +S
Sbjct: 197 ---------VDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQYLNPSVIS-- 245
Query: 377 HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
L+ +L DP R K D++ H +FK
Sbjct: 246 ----LLKHMLQVDPMKRATIK----DIREHEWFK 271
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 120/320 (37%), Gaps = 74/320 (23%)
Query: 76 GLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHR 135
G ++ + + +G G G V L Y G + A+ R
Sbjct: 4 GAHIGNYQIVKTLGEGSFGKVKLA-----YHTTTGQK----VALKIINKKVLAKSDMQGR 54
Query: 136 AEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARF 195
E E L++L HP + LY ++ + +V+E+ +G +L + + S AR
Sbjct: 55 IEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY-AGNELFD--YIVQRDKMSEQEARR 111
Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXX 255
+ +++ A+EY H I++RDLKPEN+L+ ++ ++DF L SN +
Sbjct: 112 FFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGL---SNIMTD--------- 159
Query: 256 XXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP 315
FL GS PN A P + Y P
Sbjct: 160 -----------------GNFLKTSCGS-------PN---YAAP------EVISGKLYAGP 186
Query: 316 EVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPT-QSPSSMS 374
E VD W+ G+ +Y M+ R PF S +NI T P SP
Sbjct: 187 E----------VDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPG--- 233
Query: 375 EYHARDLISGLLNKDPCNRL 394
A LI +L +P NR+
Sbjct: 234 ---AAGLIKRMLIVNPLNRI 250
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 85/362 (23%), Positives = 125/362 (34%), Gaps = 97/362 (26%)
Query: 78 TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAE 137
+ +F +IG G G VY K R E L + A
Sbjct: 4 SMENFQKVEKIGEGTYGVVY------KARNKLTGEVVALKKIRLDTETEGVPST----AI 53
Query: 138 MEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYA 197
E +LK L+HP + L N +V EF DL + L + Y
Sbjct: 54 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKTFMDASALTGIPLPLIKSYL 112
Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXX 257
++L L + H +++RDLKP+N+L+ ++G I L+DF L+
Sbjct: 113 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA------------------- 153
Query: 258 XXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV 317
R FG P R + E V T Y +PE+
Sbjct: 154 --------------------RAFG-------VPVRTYXHE---------VVTLWYRAPEI 177
Query: 318 ASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK---------------- 360
G + AVD W+ G EM+ R F S L I +
Sbjct: 178 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 237
Query: 361 ---KPLTFPTQSPSSMSEY------HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG 411
KP +FP + S+ R L+S +L+ DP R+ +K A HPFF+
Sbjct: 238 PDYKP-SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQD 292
Query: 412 LN 413
+
Sbjct: 293 VT 294
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/308 (22%), Positives = 112/308 (36%), Gaps = 65/308 (21%)
Query: 111 HEPCCL-YAMXXXXXXXXXXXXXXHRAEMEKKILKMLD-------HPFLPTLYAEFEASN 162
H+P C YA+ E+ + LK +D HP + L +E +
Sbjct: 38 HKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNT 97
Query: 163 FSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENV 222
F +V + G+L ++ S R +L + LH L I++RDLKPEN+
Sbjct: 98 FFFLVFDLMKKGELFDYLTEKV--TLSEKETRKIMRALLEVICALHKLNIVHRDLKPENI 155
Query: 223 LVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGS 282
L+ D +I L+DF S +
Sbjct: 156 LLDDDMNIKLTDFGFSC--------------------------------------QLDPG 177
Query: 283 KKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYG 342
+K++++ ++A + CS H +G VD W+ G+ +Y ++ G
Sbjct: 178 EKLRSVCGTPSYLAPEII--ECSMNDNHP----------GYGKEVDMWSTGVIMYTLLAG 225
Query: 343 RTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAAD 402
PF LR I+ F + S+ +DL+S L P R ++ A
Sbjct: 226 SPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDT-VKDLVSRFLVVQPQKRYTAEEALA- 283
Query: 403 VKTHPFFK 410
HPFF+
Sbjct: 284 ---HPFFQ 288
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 117/300 (39%), Gaps = 85/300 (28%)
Query: 139 EKKILKMLDHPFLPTLY----AEFEASNFSCIVMEFCSGGDLHSLRHKQ----PHKRFSL 190
E + L+HP + +Y AE A IVME+ G L + H + P + +
Sbjct: 62 EAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEV 121
Query: 191 TSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXX 250
A+ AL + H GII+RD+KP N+++ + + + DF + + AI
Sbjct: 122 I------ADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGI---ARAIADS--- 169
Query: 251 XXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTH 310
G+ QT + +GT
Sbjct: 170 ------------------------------GNSVTQT----------------AAVIGTA 183
Query: 311 EYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSN-ETTLRNIVKKPLTFPTQS 369
+Y+SPE A G S D ++ G +YE++ G PF S +++ + P+
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPI-----P 238
Query: 370 PSSMSEYHARDLISGLLN---KDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEIP 426
PS+ E + DL + +L K+P NR + AA+++ + + + PPE P
Sbjct: 239 PSARHEGLSADLDAVVLKALAKNPENRYQT---AAEMRA-------DLVRVHNGEPPEAP 288
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 117/300 (39%), Gaps = 85/300 (28%)
Query: 139 EKKILKMLDHPFLPTLY----AEFEASNFSCIVMEFCSGGDLHSLRHKQ----PHKRFSL 190
E + L+HP + +Y AE A IVME+ G L + H + P + +
Sbjct: 62 EAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEV 121
Query: 191 TSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXX 250
A+ AL + H GII+RD+KP N+++ + + + DF + + AI
Sbjct: 122 I------ADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGI---ARAIADS--- 169
Query: 251 XXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTH 310
G+ QT + +GT
Sbjct: 170 ------------------------------GNSVTQT----------------AAVIGTA 183
Query: 311 EYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSN-ETTLRNIVKKPLTFPTQS 369
+Y+SPE A G S D ++ G +YE++ G PF S +++ + P+
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPI-----P 238
Query: 370 PSSMSEYHARDLISGLLN---KDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEIP 426
PS+ E + DL + +L K+P NR + AA+++ + + + PPE P
Sbjct: 239 PSARHEGLSADLDAVVLKALAKNPENRYQT---AAEMRA-------DLVRVHNGEPPEAP 288
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 85/361 (23%), Positives = 123/361 (34%), Gaps = 97/361 (26%)
Query: 79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEM 138
+F +IG G G VY K R E L + A
Sbjct: 2 MENFQKVEKIGEGTYGVVY------KARNKLTGEVVALKKIRLDTETEGVPST----AIR 51
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E +LK L+HP + L N +V EF DL L + Y
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF 110
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
++L L + H +++RDLKP+N+L+ ++G I L+DF L+
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA-------------------- 150
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
R FG P R + E V T Y +PE+
Sbjct: 151 -------------------RAFG-------VPVRTYTHE---------VVTLWYRAPEIL 175
Query: 319 SGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK----------------- 360
G + AVD W+ G EM+ R F S L I +
Sbjct: 176 LGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 235
Query: 361 --KPLTFPTQSPSSMSEY------HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGL 412
KP +FP + S+ R L+S +L+ DP R+ +K A HPFF+ +
Sbjct: 236 DYKP-SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQDV 290
Query: 413 N 413
Sbjct: 291 T 291
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 85/362 (23%), Positives = 124/362 (34%), Gaps = 97/362 (26%)
Query: 78 TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAE 137
+ +F +IG G G VY K R E L + A
Sbjct: 2 SMENFQKVEKIGEGTYGVVY------KARNKLTGEVVALKKIRLDTETEGVPST----AI 51
Query: 138 MEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYA 197
E +LK L+HP + L N +V EF DL L + Y
Sbjct: 52 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYL 110
Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXX 257
++L L + H +++RDLKP+N+L+ ++G I L+DF L+
Sbjct: 111 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA------------------- 151
Query: 258 XXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV 317
R FG P R + E V T Y +PE+
Sbjct: 152 --------------------RAFG-------VPVRTYTHEVV---------TLWYRAPEI 175
Query: 318 ASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK---------------- 360
G + AVD W+ G EM+ R F S L I +
Sbjct: 176 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 235
Query: 361 ---KPLTFPTQSPSSMSEY------HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG 411
KP +FP + S+ R L+S +L+ DP R+ +K A HPFF+
Sbjct: 236 PDYKP-SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQD 290
Query: 412 LN 413
+
Sbjct: 291 VT 292
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 104/261 (39%), Gaps = 65/261 (24%)
Query: 135 RAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSAR 194
R E E L++L HP + LY ++ + +V+E+ +G +L + + S AR
Sbjct: 50 RIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY-AGNELFD--YIVQRDKMSEQEAR 106
Query: 195 FYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXX 254
+ +++ A+EY H I++RDLKPEN+L+ ++ ++DF L SN +
Sbjct: 107 RFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGL---SNIMTD-------- 155
Query: 255 XXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVS 314
FL GS PN A P + Y
Sbjct: 156 ------------------GNFLKTSCGS-------PN---YAAP------EVISGKLYAG 181
Query: 315 PEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPT-QSPSSM 373
PE VD W+ G+ +Y M+ R PF S +NI T P SP
Sbjct: 182 PE----------VDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPG-- 229
Query: 374 SEYHARDLISGLLNKDPCNRL 394
A LI +L +P NR+
Sbjct: 230 ----AAGLIKRMLIVNPLNRI 246
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 85/362 (23%), Positives = 124/362 (34%), Gaps = 97/362 (26%)
Query: 78 TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAE 137
+ +F +IG G G VY K R E L + A
Sbjct: 1 SMENFQKVEKIGEGTYGVVY------KARNKLTGEVVALKKIRLDTETEGVPST----AI 50
Query: 138 MEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYA 197
E +LK L+HP + L N +V EF DL L + Y
Sbjct: 51 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYL 109
Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXX 257
++L L + H +++RDLKP+N+L+ ++G I L+DF L+
Sbjct: 110 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA------------------- 150
Query: 258 XXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV 317
R FG P R + E V T Y +PE+
Sbjct: 151 --------------------RAFG-------VPVRTYXHE---------VVTLWYRAPEI 174
Query: 318 ASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK---------------- 360
G + AVD W+ G EM+ R F S L I +
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 234
Query: 361 ---KPLTFPTQSPSSMSEY------HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG 411
KP +FP + S+ R L+S +L+ DP R+ +K A HPFF+
Sbjct: 235 PDYKP-SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQD 289
Query: 412 LN 413
+
Sbjct: 290 VT 291
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 85/362 (23%), Positives = 124/362 (34%), Gaps = 97/362 (26%)
Query: 78 TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAE 137
+ +F +IG G G VY K R E L + A
Sbjct: 1 SMENFQKVEKIGEGTYGVVY------KARNKLTGEVVALKKIRLDTETEGVPST----AI 50
Query: 138 MEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYA 197
E +LK L+HP + L N +V EF DL L + Y
Sbjct: 51 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYL 109
Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXX 257
++L L + H +++RDLKP+N+L+ ++G I L+DF L+
Sbjct: 110 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA------------------- 150
Query: 258 XXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV 317
R FG P R + E V T Y +PE+
Sbjct: 151 --------------------RAFG-------VPVRTYXHE---------VVTLWYRAPEI 174
Query: 318 ASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK---------------- 360
G + AVD W+ G EM+ R F S L I +
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 234
Query: 361 ---KPLTFPTQSPSSMSEY------HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG 411
KP +FP + S+ R L+S +L+ DP R+ +K A HPFF+
Sbjct: 235 PDYKP-SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQD 289
Query: 412 LN 413
+
Sbjct: 290 VT 291
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 85/361 (23%), Positives = 123/361 (34%), Gaps = 97/361 (26%)
Query: 79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEM 138
+F +IG G G VY K R E L + A
Sbjct: 2 MENFQKVEKIGEGTYGVVY------KARNKLTGEVVALXKIRLDTETEGVPST----AIR 51
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E +LK L+HP + L N +V EF DL L + Y
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF 110
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
++L L + H +++RDLKP+N+L+ ++G I L+DF L+
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA-------------------- 150
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
R FG P R + E V T Y +PE+
Sbjct: 151 -------------------RAFG-------VPVRTYTHE---------VVTLWYRAPEIL 175
Query: 319 SGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK----------------- 360
G + AVD W+ G EM+ R F S L I +
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 235
Query: 361 --KPLTFPTQSPSSMSEY------HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGL 412
KP +FP + S+ R L+S +L+ DP R+ +K A HPFF+ +
Sbjct: 236 DYKP-SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQDV 290
Query: 413 N 413
Sbjct: 291 T 291
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 85/361 (23%), Positives = 123/361 (34%), Gaps = 97/361 (26%)
Query: 79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEM 138
+F +IG G G VY K R E L + A
Sbjct: 1 MENFQKVEKIGEGTYGVVY------KARNKLTGEVVALXKIRLDTETEGVPST----AIR 50
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E +LK L+HP + L N +V EF DL L + Y
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF 109
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
++L L + H +++RDLKP+N+L+ ++G I L+DF L+
Sbjct: 110 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA-------------------- 149
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
R FG P R + E V T Y +PE+
Sbjct: 150 -------------------RAFG-------VPVRTYTHE---------VVTLWYRAPEIL 174
Query: 319 SGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK----------------- 360
G + AVD W+ G EM+ R F S L I +
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 234
Query: 361 --KPLTFPTQSPSSMSEY------HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGL 412
KP +FP + S+ R L+S +L+ DP R+ +K A HPFF+ +
Sbjct: 235 DYKP-SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQDV 289
Query: 413 N 413
Sbjct: 290 T 290
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 85/361 (23%), Positives = 123/361 (34%), Gaps = 97/361 (26%)
Query: 79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEM 138
+F +IG G G VY K R E L + A
Sbjct: 2 MENFQKVEKIGEGTYGVVY------KARNKLTGEVVALKKIRLDTETEGVPST----AIR 51
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E +LK L+HP + L N +V EF DL L + Y
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF 110
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
++L L + H +++RDLKP+N+L+ ++G I L+DF L+
Sbjct: 111 QLLQGLSFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA-------------------- 150
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
R FG P R + E V T Y +PE+
Sbjct: 151 -------------------RAFG-------VPVRTYTHE---------VVTLWYRAPEIL 175
Query: 319 SGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK----------------- 360
G + AVD W+ G EM+ R F S L I +
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 235
Query: 361 --KPLTFPTQSPSSMSEY------HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGL 412
KP +FP + S+ R L+S +L+ DP R+ +K A HPFF+ +
Sbjct: 236 DYKP-SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQDV 290
Query: 413 N 413
Sbjct: 291 T 291
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 85/361 (23%), Positives = 123/361 (34%), Gaps = 97/361 (26%)
Query: 79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEM 138
+F +IG G G VY K R E L + A
Sbjct: 9 MENFQKVEKIGEGTYGVVY------KARNKLTGEVVALKKIRLDTETEGVPST----AIR 58
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E +LK L+HP + L N +V EF DL L + Y
Sbjct: 59 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF 117
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
++L L + H +++RDLKP+N+L+ ++G I L+DF L+
Sbjct: 118 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA-------------------- 157
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
R FG P R + E V T Y +PE+
Sbjct: 158 -------------------RAFG-------VPVRTYTHE---------VVTLWYRAPEIL 182
Query: 319 SGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK----------------- 360
G + AVD W+ G EM+ R F S L I +
Sbjct: 183 LGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 242
Query: 361 --KPLTFPTQSPSSMSEY------HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGL 412
KP +FP + S+ R L+S +L+ DP R+ +K A HPFF+ +
Sbjct: 243 DYKP-SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQDV 297
Query: 413 N 413
Sbjct: 298 T 298
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 85/362 (23%), Positives = 124/362 (34%), Gaps = 97/362 (26%)
Query: 78 TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAE 137
+ +F +IG G G VY K R E L + A
Sbjct: 5 SMENFQKVEKIGEGTYGVVY------KARNKLTGEVVALKKIRLDTETEGVPST----AI 54
Query: 138 MEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYA 197
E +LK L+HP + L N +V EF DL L + Y
Sbjct: 55 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYL 113
Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXX 257
++L L + H +++RDLKP+N+L+ ++G I L+DF L+
Sbjct: 114 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA------------------- 154
Query: 258 XXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV 317
R FG P R + E V T Y +PE+
Sbjct: 155 --------------------RAFG-------VPVRTYXHEVV---------TLWYRAPEI 178
Query: 318 ASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK---------------- 360
G + AVD W+ G EM+ R F S L I +
Sbjct: 179 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 238
Query: 361 ---KPLTFPTQSPSSMSEY------HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG 411
KP +FP + S+ R L+S +L+ DP R+ +K A HPFF+
Sbjct: 239 PDYKP-SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQD 293
Query: 412 LN 413
+
Sbjct: 294 VT 295
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 85/362 (23%), Positives = 124/362 (34%), Gaps = 97/362 (26%)
Query: 78 TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAE 137
+ +F +IG G G VY K R E L + A
Sbjct: 1 SMENFQKVEKIGEGTYGVVY------KARNKLTGEVVALKKIRLDTETEGVPST----AI 50
Query: 138 MEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYA 197
E +LK L+HP + L N +V EF DL L + Y
Sbjct: 51 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYL 109
Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXX 257
++L L + H +++RDLKP+N+L+ ++G I L+DF L+
Sbjct: 110 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA------------------- 150
Query: 258 XXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV 317
R FG P R + E V T Y +PE+
Sbjct: 151 --------------------RAFG-------VPVRTYXHE---------VVTLWYRAPEI 174
Query: 318 ASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK---------------- 360
G + AVD W+ G EM+ R F S L I +
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 234
Query: 361 ---KPLTFPTQSPSSMSEY------HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG 411
KP +FP + S+ R L+S +L+ DP R+ +K A HPFF+
Sbjct: 235 PDYKP-SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQD 289
Query: 412 LN 413
+
Sbjct: 290 VT 291
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 85/361 (23%), Positives = 123/361 (34%), Gaps = 97/361 (26%)
Query: 79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEM 138
+F +IG G G VY K R E L + A
Sbjct: 2 MENFQKVEKIGEGTYGVVY------KARNKLTGEVVALKKIRLDTETEGVPST----AIR 51
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E +LK L+HP + L N +V EF DL L + Y
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF 110
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
++L L + H +++RDLKP+N+L+ ++G I L+DF L+
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA-------------------- 150
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
R FG P R + E V T Y +PE+
Sbjct: 151 -------------------RAFG-------VPVRTYTHE---------VVTLWYRAPEIL 175
Query: 319 SGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK----------------- 360
G + AVD W+ G EM+ R F S L I +
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 235
Query: 361 --KPLTFPTQSPSSMSEY------HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGL 412
KP +FP + S+ R L+S +L+ DP R+ +K A HPFF+ +
Sbjct: 236 DYKP-SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQDV 290
Query: 413 N 413
Sbjct: 291 T 291
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 123/359 (34%), Gaps = 97/359 (27%)
Query: 81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEK 140
+F +IG G G VY K R E L + A E
Sbjct: 3 NFQKVEKIGEGTYGVVY------KARNKLTGEVVALKKIRLDTETEGVPST----AIREI 52
Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
+LK L+HP + L N +V EF DL L + Y ++
Sbjct: 53 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQL 111
Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXR 260
L L + H +++RDLKP+N+L+ ++G I L+DF L+
Sbjct: 112 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA---------------------- 149
Query: 261 SQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASG 320
R FG P R + E V T Y +PE+ G
Sbjct: 150 -----------------RAFG-------VPVRTYTHE---------VVTLWYRAPEILLG 176
Query: 321 GS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK------------------- 360
+ AVD W+ G EM+ R F S L I +
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 236
Query: 361 KPLTFPTQSPSSMSEY------HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLN 413
KP +FP + S+ R L+S +L+ DP R+ +K A HPFF+ +
Sbjct: 237 KP-SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQDVT 290
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 85/361 (23%), Positives = 123/361 (34%), Gaps = 97/361 (26%)
Query: 79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEM 138
+F +IG G G VY K R E L + A
Sbjct: 1 MENFQKVEKIGEGTYGVVY------KARNKLTGEVVALKKIRLDTETEGVPST----AIR 50
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E +LK L+HP + L N +V EF DL L + Y
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF 109
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
++L L + H +++RDLKP+N+L+ ++G I L+DF L+
Sbjct: 110 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA-------------------- 149
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
R FG P R + E V T Y +PE+
Sbjct: 150 -------------------RAFG-------VPVRTYTHE---------VVTLWYRAPEIL 174
Query: 319 SGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK----------------- 360
G + AVD W+ G EM+ R F S L I +
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 234
Query: 361 --KPLTFPTQSPSSMSEY------HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGL 412
KP +FP + S+ R L+S +L+ DP R+ +K A HPFF+ +
Sbjct: 235 DYKP-SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQDV 289
Query: 413 N 413
Sbjct: 290 T 290
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 85/361 (23%), Positives = 123/361 (34%), Gaps = 97/361 (26%)
Query: 79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEM 138
+F +IG G G VY K R E L + A
Sbjct: 9 MENFQKVEKIGEGTYGVVY------KARNKLTGEVVALKKIRLDTETEGVPST----AIR 58
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E +LK L+HP + L N +V EF DL L + Y
Sbjct: 59 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF 117
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
++L L + H +++RDLKP+N+L+ ++G I L+DF L+
Sbjct: 118 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA-------------------- 157
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
R FG P R + E V T Y +PE+
Sbjct: 158 -------------------RAFG-------VPVRTYTHE---------VVTLWYRAPEIL 182
Query: 319 SGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK----------------- 360
G + AVD W+ G EM+ R F S L I +
Sbjct: 183 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 242
Query: 361 --KPLTFPTQSPSSMSEY------HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGL 412
KP +FP + S+ R L+S +L+ DP R+ +K A HPFF+ +
Sbjct: 243 DYKP-SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQDV 297
Query: 413 N 413
Sbjct: 298 T 298
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 85/362 (23%), Positives = 124/362 (34%), Gaps = 97/362 (26%)
Query: 78 TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAE 137
+ +F +IG G G VY K R E L + A
Sbjct: 4 SMENFQKVEKIGEGTYGVVY------KARNKLTGEVVALKKIRLDTETEGVPST----AI 53
Query: 138 MEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYA 197
E +LK L+HP + L N +V EF DL L + Y
Sbjct: 54 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYL 112
Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXX 257
++L L + H +++RDLKP+N+L+ ++G I L+DF L+
Sbjct: 113 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA------------------- 153
Query: 258 XXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV 317
R FG P R + E V T Y +PE+
Sbjct: 154 --------------------RAFG-------VPVRTYXHE---------VVTLWYRAPEI 177
Query: 318 ASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK---------------- 360
G + AVD W+ G EM+ R F S L I +
Sbjct: 178 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 237
Query: 361 ---KPLTFPTQSPSSMSEY------HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG 411
KP +FP + S+ R L+S +L+ DP R+ +K A HPFF+
Sbjct: 238 PDYKP-SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQD 292
Query: 412 LN 413
+
Sbjct: 293 VT 294
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 85/362 (23%), Positives = 124/362 (34%), Gaps = 97/362 (26%)
Query: 78 TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAE 137
+ +F +IG G G VY K R E L + A
Sbjct: 3 SMENFQKVEKIGEGTYGVVY------KARNKLTGEVVALKKIRLDTETEGVPST----AI 52
Query: 138 MEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYA 197
E +LK L+HP + L N +V EF DL L + Y
Sbjct: 53 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYL 111
Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXX 257
++L L + H +++RDLKP+N+L+ ++G I L+DF L+
Sbjct: 112 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA------------------- 152
Query: 258 XXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV 317
R FG P R + E V T Y +PE+
Sbjct: 153 --------------------RAFG-------VPVRTYXHE---------VVTLWYRAPEI 176
Query: 318 ASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK---------------- 360
G + AVD W+ G EM+ R F S L I +
Sbjct: 177 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 236
Query: 361 ---KPLTFPTQSPSSMSEY------HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG 411
KP +FP + S+ R L+S +L+ DP R+ +K A HPFF+
Sbjct: 237 PDYKP-SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQD 291
Query: 412 LN 413
+
Sbjct: 292 VT 293
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 123/359 (34%), Gaps = 97/359 (27%)
Query: 78 TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAE 137
+ +F +IG G G VY K R E L + A
Sbjct: 1 SMENFQKVEKIGEGTYGVVY------KARNKLTGEVVALKKIRLDTETEGVPST----AI 50
Query: 138 MEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYA 197
E +LK L+HP + L N +V EF DL L + Y
Sbjct: 51 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYL 109
Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXX 257
++L L + H +++RDLKP+N+L+ ++G I L+DF L+
Sbjct: 110 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA------------------- 150
Query: 258 XXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV 317
R FG P R + E V T Y +PE+
Sbjct: 151 --------------------RAFG-------VPVRTYXHEVV---------TLWYRAPEI 174
Query: 318 ASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK---------------- 360
G + AVD W+ G EM+ R F S L I +
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 234
Query: 361 ---KPLTFPTQSPSSMSEY------HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
KP +FP + S+ R L+S +L+ DP R+ +K A HPFF+
Sbjct: 235 PDYKP-SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQ 288
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 106/276 (38%), Gaps = 66/276 (23%)
Query: 135 RAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSAR 194
R + E + LK L H + LY E +N +V+E+C GG+L Q R S R
Sbjct: 54 RIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQ--DRLSEEETR 111
Query: 195 FYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXX 254
+++ A+ Y+H G +RDLKPEN+L D + L D LC+
Sbjct: 112 VVFRQIVSAVAYVHSQGYAHRDLKPENLLF--DEYHKLKLIDFGLCAKP----------- 158
Query: 255 XXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVS 314
++ Y Q GS L A P + S++G+
Sbjct: 159 ----KGNKDYHLQTCC----------GS----------LAYAAPELIQGKSYLGS----- 189
Query: 315 PEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQ-SPSSM 373
D W+ GI +Y ++ G PF + + I++ P SPSS+
Sbjct: 190 -----------EADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYDVPKWLSPSSI 238
Query: 374 SEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFF 409
L+ +L DP R+ K ++ HP+
Sbjct: 239 L------LLQQMLQVDPKKRISMK----NLLNHPWI 264
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 54/103 (52%), Gaps = 5/103 (4%)
Query: 138 MEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGG--DLHSLRHKQPHKRFSLTSARF 195
+E IL DHP + L F N I++EFC+GG D L ++P + + +
Sbjct: 83 VEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERP---LTESQIQV 139
Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ L AL YLH II+RDLK N+L DG I L+DF +S
Sbjct: 140 VCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVS 182
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 85/362 (23%), Positives = 124/362 (34%), Gaps = 97/362 (26%)
Query: 78 TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAE 137
+ +F +IG G G VY K R E L + A
Sbjct: 3 SMENFQKVEKIGEGTYGVVY------KARNKLTGEVVALKKIRLDTETEGVPST----AI 52
Query: 138 MEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYA 197
E +LK L+HP + L N +V EF DL L + Y
Sbjct: 53 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYL 111
Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXX 257
++L L + H +++RDLKP+N+L+ ++G I L+DF L+
Sbjct: 112 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA------------------- 152
Query: 258 XXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV 317
R FG P R + E V T Y +PE+
Sbjct: 153 --------------------RAFG-------VPVRTYXHE---------VVTLWYRAPEI 176
Query: 318 ASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK---------------- 360
G + AVD W+ G EM+ R F S L I +
Sbjct: 177 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 236
Query: 361 ---KPLTFPTQSPSSMSEY------HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG 411
KP +FP + S+ R L+S +L+ DP R+ +K A HPFF+
Sbjct: 237 PDYKP-SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQD 291
Query: 412 LN 413
+
Sbjct: 292 VT 293
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 54/103 (52%), Gaps = 5/103 (4%)
Query: 138 MEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGG--DLHSLRHKQPHKRFSLTSARF 195
+E IL DHP + L F N I++EFC+GG D L ++P + + +
Sbjct: 83 VEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERP---LTESQIQV 139
Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ L AL YLH II+RDLK N+L DG I L+DF +S
Sbjct: 140 VCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVS 182
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 82/206 (39%), Gaps = 57/206 (27%)
Query: 144 KMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSL-RHKQPHKRFSLTSARFYAAEVLV 202
K L H + F + F I ME GG L +L R K + + + FY ++L
Sbjct: 60 KHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILE 119
Query: 203 ALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQ 262
L+YLH I++RD+K +NVL+ +
Sbjct: 120 GLKYLHDNQIVHRDIKGDNVLINT------------------------------------ 143
Query: 263 TYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGG- 321
YS L ++ F SK++ + P + +F GT +Y++PE+ G
Sbjct: 144 -----YSGVLK--ISDFGTSKRLAGINPC-----------TETFTGTLQYMAPEIIDKGP 185
Query: 322 -SHGNAVDWWAFGIFIYEMIYGRTPF 346
+G A D W+ G I EM G+ PF
Sbjct: 186 RGYGKAADIWSLGCTIIEMATGKPPF 211
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/349 (21%), Positives = 121/349 (34%), Gaps = 94/349 (26%)
Query: 82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEM--- 138
D + +IG G G V L + RQ R E+
Sbjct: 47 LDSYVKIGEGSTGIVCLAREKHSGRQ---------------VAVKMMDLRKQQRRELLFN 91
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E I++ H + +Y + ++MEF GG L + + R +
Sbjct: 92 EVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ---VRLNEEQIATVCE 148
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
VL AL YLH G+I+RD+K +++L+ DG + LSDF C+
Sbjct: 149 AVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDF--GFCAQ---------------- 190
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
+++ +K TP ++A V +RS
Sbjct: 191 -----------------ISKDVPKRKXLVGTP--YWMAPEVISRSL-------------- 217
Query: 319 SGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHA 378
+ VD W+ GI + EM+ G P+ + S ++ + P P + H
Sbjct: 218 ----YATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSP-------PPKLKNSHK 266
Query: 379 -----RDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTP 422
RD + +L +DP R A ++ HPF L L L P
Sbjct: 267 VSPVLRDFLERMLVRDPQER----ATAQELLDHPFL--LQTGLPECLVP 309
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 85/363 (23%), Positives = 124/363 (34%), Gaps = 97/363 (26%)
Query: 77 LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRA 136
+ +F +IG G G VY K R E L + A
Sbjct: 4 VDMENFQKVEKIGEGTYGVVY------KARNKLTGEVVALKKIRLDTETEGVPST----A 53
Query: 137 EMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFY 196
E +LK L+HP + L N +V EF DL L + Y
Sbjct: 54 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY 112
Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXX 256
++L L + H +++RDLKP+N+L+ ++G I L+DF L+
Sbjct: 113 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA------------------ 154
Query: 257 XXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE 316
R FG P R + E V T Y +PE
Sbjct: 155 ---------------------RAFG-------VPVRTYTHE---------VVTLWYRAPE 177
Query: 317 VASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK--------------- 360
+ G + AVD W+ G EM+ R F S L I +
Sbjct: 178 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS 237
Query: 361 ----KPLTFPTQSPSSMSEY------HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
KP +FP + S+ R L+S +L+ DP R+ +K A HPFF+
Sbjct: 238 MPDYKP-SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQ 292
Query: 411 GLN 413
+
Sbjct: 293 DVT 295
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 85/361 (23%), Positives = 123/361 (34%), Gaps = 97/361 (26%)
Query: 79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEM 138
+F +IG G G VY K R E L + A
Sbjct: 2 MENFQKVEKIGEGTYGVVY------KARNKLTGEVVALKKIRLDTETEGVPST----AIR 51
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E +LK L+HP + L N +V EF DL L + Y
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF 110
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
++L L + H +++RDLKP+N+L+ ++G I L+DF L+
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA-------------------- 150
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
R FG P R + E V T Y +PE+
Sbjct: 151 -------------------RAFG-------VPVRTYTHEVV---------TLWYRAPEIL 175
Query: 319 SGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK----------------- 360
G + AVD W+ G EM+ R F S L I +
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 235
Query: 361 --KPLTFPTQSPSSMSEY------HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGL 412
KP +FP + S+ R L+S +L+ DP R+ +K A HPFF+ +
Sbjct: 236 DYKP-SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQDV 290
Query: 413 N 413
Sbjct: 291 T 291
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 54/103 (52%), Gaps = 5/103 (4%)
Query: 138 MEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGG--DLHSLRHKQPHKRFSLTSARF 195
+E IL DHP + L F N I++EFC+GG D L ++P + + +
Sbjct: 56 VEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERP---LTESQIQV 112
Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ L AL YLH II+RDLK N+L DG I L+DF +S
Sbjct: 113 VCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVS 155
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 54/103 (52%), Gaps = 5/103 (4%)
Query: 138 MEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGG--DLHSLRHKQPHKRFSLTSARF 195
+E IL DHP + L F N I++EFC+GG D L ++P + + +
Sbjct: 83 VEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERP---LTESQIQV 139
Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ L AL YLH II+RDLK N+L DG I L+DF +S
Sbjct: 140 VCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVS 182
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 85/362 (23%), Positives = 124/362 (34%), Gaps = 97/362 (26%)
Query: 78 TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAE 137
+ +F +IG G G VY K R E L + A
Sbjct: 4 SMENFQKVEKIGEGTYGVVY------KARNKLTGEVVALKKIRLDTETEGVPST----AI 53
Query: 138 MEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYA 197
E +LK L+HP + L N +V EF DL L + Y
Sbjct: 54 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYL 112
Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXX 257
++L L + H +++RDLKP+N+L+ ++G I L+DF L+
Sbjct: 113 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA------------------- 153
Query: 258 XXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV 317
R FG P R + E V T Y +PE+
Sbjct: 154 --------------------RAFG-------VPVRTYXHE---------VVTLWYRAPEI 177
Query: 318 ASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK---------------- 360
G + AVD W+ G EM+ R F S L I +
Sbjct: 178 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 237
Query: 361 ---KPLTFPTQSPSSMSEY------HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG 411
KP +FP + S+ R L+S +L+ DP R+ +K A HPFF+
Sbjct: 238 PDYKP-SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQD 292
Query: 412 LN 413
+
Sbjct: 293 VT 294
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 85/362 (23%), Positives = 124/362 (34%), Gaps = 97/362 (26%)
Query: 78 TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAE 137
+ +F +IG G G VY K R E L + A
Sbjct: 2 SMENFQKVEKIGEGTYGVVY------KARNKLTGEVVALKKIRLDTETEGVPST----AI 51
Query: 138 MEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYA 197
E +LK L+HP + L N +V EF DL L + Y
Sbjct: 52 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYL 110
Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXX 257
++L L + H +++RDLKP+N+L+ ++G I L+DF L+
Sbjct: 111 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA------------------- 151
Query: 258 XXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV 317
R FG P R + E V T Y +PE+
Sbjct: 152 --------------------RAFG-------VPVRTYXHEVV---------TLWYRAPEI 175
Query: 318 ASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK---------------- 360
G + AVD W+ G EM+ R F S L I +
Sbjct: 176 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 235
Query: 361 ---KPLTFPTQSPSSMSEY------HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG 411
KP +FP + S+ R L+S +L+ DP R+ +K A HPFF+
Sbjct: 236 PDYKP-SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQD 290
Query: 412 LN 413
+
Sbjct: 291 VT 292
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 85/361 (23%), Positives = 123/361 (34%), Gaps = 97/361 (26%)
Query: 79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEM 138
+F +IG G G VY K R E L + A
Sbjct: 1 MENFQKVEKIGEGTYGVVY------KARNKLTGEVVALKKIRLDTETEGVPST----AIR 50
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E +LK L+HP + L N +V EF DL L + Y
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF 109
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
++L L + H +++RDLKP+N+L+ ++G I L+DF L+
Sbjct: 110 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA-------------------- 149
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
R FG P R + E V T Y +PE+
Sbjct: 150 -------------------RAFG-------VPVRTYXHE---------VVTLWYRAPEIL 174
Query: 319 SGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK----------------- 360
G + AVD W+ G EM+ R F S L I +
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 234
Query: 361 --KPLTFPTQSPSSMSEY------HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGL 412
KP +FP + S+ R L+S +L+ DP R+ +K A HPFF+ +
Sbjct: 235 DYKP-SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQDV 289
Query: 413 N 413
Sbjct: 290 T 290
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 85/361 (23%), Positives = 123/361 (34%), Gaps = 97/361 (26%)
Query: 79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEM 138
+F +IG G G VY K R E L + A
Sbjct: 1 MENFQKVEKIGEGTYGVVY------KARNKLTGEVVALKKIRLDTETEGVPST----AIR 50
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E +LK L+HP + L N +V EF DL L + Y
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF 109
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
++L L + H +++RDLKP+N+L+ ++G I L+DF L+
Sbjct: 110 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA-------------------- 149
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
R FG P R + E V T Y +PE+
Sbjct: 150 -------------------RAFG-------VPVRTYXHE---------VVTLWYRAPEIL 174
Query: 319 SGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK----------------- 360
G + AVD W+ G EM+ R F S L I +
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 234
Query: 361 --KPLTFPTQSPSSMSEY------HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGL 412
KP +FP + S+ R L+S +L+ DP R+ +K A HPFF+ +
Sbjct: 235 DYKP-SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQDV 289
Query: 413 N 413
Sbjct: 290 T 290
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 117/331 (35%), Gaps = 78/331 (23%)
Query: 81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEK 140
DF+ +GAG+ G V+ S H+P L M ++ E
Sbjct: 10 DFEKISELGAGNGGVVFKVS----------HKPSGL-VMARKLIHLEIKPAIRNQIIREL 58
Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
++L + P++ Y F + I ME GG L + K R + V
Sbjct: 59 QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAV 116
Query: 201 LVALEYL-HMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXX 259
+ L YL I++RD+KP N+LV S G ++ LC
Sbjct: 117 IKGLTYLREKHKIMHRDVKPSNILVNSRG-------EIKLCD------------------ 151
Query: 260 RSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS 319
FG + + + FVGT Y+SPE
Sbjct: 152 --------------------FGVS------------GQLIDEMANEFVGTRSYMSPERLQ 179
Query: 320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHAR 379
G + D W+ G+ + EM GR P + L IV +P P + PS++ +
Sbjct: 180 GTHYSVQSDIWSMGLSLVEMAVGRYPRPPMAIFELLDYIVNEP---PPKLPSAVFSLEFQ 236
Query: 380 DLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
D ++ L K+P R K+ + H F K
Sbjct: 237 DFVNKCLIKNPAERADLKQ----LMVHAFIK 263
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 85/361 (23%), Positives = 123/361 (34%), Gaps = 97/361 (26%)
Query: 79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEM 138
+F +IG G G VY K R E L + A
Sbjct: 3 MENFQKVEKIGEGTYGVVY------KARNKLTGEVVALKKIRLDTETEGVPST----AIR 52
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E +LK L+HP + L N +V EF DL L + Y
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF 111
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
++L L + H +++RDLKP+N+L+ ++G I L+DF L+
Sbjct: 112 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA-------------------- 151
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
R FG P R + E V T Y +PE+
Sbjct: 152 -------------------RAFG-------VPVRTYXHEVV---------TLWYRAPEIL 176
Query: 319 SGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK----------------- 360
G + AVD W+ G EM+ R F S L I +
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 236
Query: 361 --KPLTFPTQSPSSMSEY------HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGL 412
KP +FP + S+ R L+S +L+ DP R+ +K A HPFF+ +
Sbjct: 237 DYKP-SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQDV 291
Query: 413 N 413
Sbjct: 292 T 292
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 104/267 (38%), Gaps = 75/267 (28%)
Query: 139 EKKILKMLDHPFLPTLY----AEFEASNFSCIVMEFCSGGDLHSLRHKQ----PHKRFSL 190
E + L+HP + +Y AE A IVME+ G L + H + P + +
Sbjct: 79 EAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEV 138
Query: 191 TSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXX 250
A+ AL + H GII+RD+KP N+++ + + + DF + + AI
Sbjct: 139 I------ADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGI---ARAIADS--- 186
Query: 251 XXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTH 310
G+ QT + +GT
Sbjct: 187 ------------------------------GNSVTQT----------------AAVIGTA 200
Query: 311 EYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSN-ETTLRNIVKKPLTFPTQS 369
+Y+SPE A G S D ++ G +YE++ G PF S +++ + P+
Sbjct: 201 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPI-----P 255
Query: 370 PSSMSEYHARDLISGLLN---KDPCNR 393
PS+ E + DL + +L K+P NR
Sbjct: 256 PSARHEGLSADLDAVVLKALAKNPENR 282
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 116/300 (38%), Gaps = 85/300 (28%)
Query: 139 EKKILKMLDHPFLPTLY----AEFEASNFSCIVMEFCSGGDLHSLRHKQ----PHKRFSL 190
E + L+HP + +Y AE A IVME+ G L + H + P + +
Sbjct: 62 EAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEV 121
Query: 191 TSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXX 250
A+ AL + H GII+RD+KP N+L+ + + + D
Sbjct: 122 I------ADACQALNFSHQNGIIHRDVKPANILISATNAVKVVD---------------- 159
Query: 251 XXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTH 310
FG + + N + ++ + +GT
Sbjct: 160 -----------------------------FGIARAIADSGNSVX-------QTAAVIGTA 183
Query: 311 EYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSN-ETTLRNIVKKPLTFPTQS 369
+Y+SPE A G S D ++ G +YE++ G PF S +++ + P+
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPI-----P 238
Query: 370 PSSMSEYHARDLISGLLN---KDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEIP 426
PS+ E + DL + +L K+P NR + AA+++ + + + PPE P
Sbjct: 239 PSARHEGLSADLDAVVLKALAKNPENRYQT---AAEMRA-------DLVRVHNGEPPEAP 288
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 84/361 (23%), Positives = 123/361 (34%), Gaps = 97/361 (26%)
Query: 79 FRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEM 138
+F +IG G G VY K R E L + A
Sbjct: 1 MENFQKVEKIGEGTYGVVY------KARNKLTGEVVALKKIRLDTETEGVPST----AIR 50
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E +LK L+HP + L N +V E DL + L + Y
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEHVHQ-DLKTFMDASALTGIPLPLIKSYLF 109
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
++L L + H +++RDLKP+N+L+ ++G I L+DF L+
Sbjct: 110 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA-------------------- 149
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
R FG P R + E V T Y +PE+
Sbjct: 150 -------------------RAFG-------VPVRTYTHE---------VVTLWYRAPEIL 174
Query: 319 SGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK----------------- 360
G + AVD W+ G EM+ R F S L I +
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 234
Query: 361 --KPLTFPTQSPSSMSEY------HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGL 412
KP +FP + S+ R L+S +L+ DP R+ +K A HPFF+ +
Sbjct: 235 DYKP-SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQDV 289
Query: 413 N 413
Sbjct: 290 T 290
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 84/362 (23%), Positives = 123/362 (33%), Gaps = 97/362 (26%)
Query: 78 TFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAE 137
+ +F +IG G G VY K R E L + A
Sbjct: 4 SMENFQKVEKIGEGTYGVVY------KARNKLTGEVVALKKIRLDTETEGVPST----AI 53
Query: 138 MEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYA 197
E +LK L+HP + L N +V E DL L + Y
Sbjct: 54 REISLLKELNHPNIVKLLDVIHTENKLYLVFEHVDQ-DLKKFMDASALTGIPLPLIKSYL 112
Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXX 257
++L L + H +++RDLKP+N+L+ ++G I L+DF L+
Sbjct: 113 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA------------------- 153
Query: 258 XXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV 317
R FG P R + E V T Y +PE+
Sbjct: 154 --------------------RAFG-------VPVRTYXHEVV---------TLWYRAPEI 177
Query: 318 ASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK---------------- 360
G + AVD W+ G EM+ R F S L I +
Sbjct: 178 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 237
Query: 361 ---KPLTFPTQSPSSMSEY------HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG 411
KP +FP + S+ R L+S +L+ DP R+ +K A HPFF+
Sbjct: 238 PDYKP-SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQD 292
Query: 412 LN 413
+
Sbjct: 293 VT 294
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 91/207 (43%), Gaps = 52/207 (25%)
Query: 139 EKKILKMLDHP----FLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSAR 194
E K+++ L+HP F+ LY + + NF + E+ GG L + K ++ +
Sbjct: 57 EVKVMRCLEHPNVLKFIGVLYKD-KRLNF---ITEYIKGGTLRGI-IKSMDSQYPWSQRV 111
Query: 195 FYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXX 254
+A ++ + YLH + II+RDL N LVR + +++++DF L+
Sbjct: 112 SFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLA---------------- 155
Query: 255 XXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRL-FVAEPVAARSCSFVGTHEYV 313
R +K Q P L + +P + + VG ++
Sbjct: 156 -----------------------RLMVDEKTQ---PEGLRSLKKPDRKKRYTVVGNPYWM 189
Query: 314 SPEVASGGSHGNAVDWWAFGIFIYEMI 340
+PE+ +G S+ VD ++FGI + E+I
Sbjct: 190 APEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 55/104 (52%), Gaps = 8/104 (7%)
Query: 309 THEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFA-APSN--ETTLRNIVKKPLTF 365
T +V+PEV + D W+ GI +Y M+ G TPFA PS+ E L I T
Sbjct: 188 TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTL 247
Query: 366 PTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFF 409
+ +++SE A+DL+S +L+ DP RL +K+ V HP+
Sbjct: 248 SGGNWNTVSET-AKDLVSKMLHVDPHQRLTAKQ----VLQHPWV 286
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
+L+ HP + TL ++ +V E GG+L +Q K FS A F +
Sbjct: 74 LLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQ--KFFSEREASFVLHTIG 131
Query: 202 VALEYLHMLGIIYRDLKPENVL 223
+EYLH G+++RDLKP N+L
Sbjct: 132 KTVEYLHSQGVVHRDLKPSNIL 153
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 73/169 (43%), Gaps = 27/169 (15%)
Query: 81 DFDLHRRIGAGDIGTV---YLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAE 137
D++L IG+G V Y K R + C +M E
Sbjct: 11 DYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMD----------------E 54
Query: 138 MEKKILKM--LDHPFLPTLYAEFEASNFSCIVMEFCSGGD-LHSLRH---KQPHKRFSLT 191
+ K+I M HP + + Y F + +VM+ SGG L ++H K HK L
Sbjct: 55 LLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLD 114
Query: 192 SARFYAA--EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ EVL LEYLH G I+RD+K N+L+ DG + ++DF +S
Sbjct: 115 ESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVS 163
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 109/301 (36%), Gaps = 87/301 (28%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E +LK L HP + +L + +V EF DL + + + + Y
Sbjct: 69 EISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDEN-KTGLQDSQIKIYLY 126
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
++L + + H I++RDLKP+N+L+ SDG + L+DF L+
Sbjct: 127 QLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLA-------------------- 166
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
R FG P R + E V T Y +P+V
Sbjct: 167 -------------------RAFG-------IPVRSYTHEVV---------TLWYRAPDVL 191
Query: 319 SGG-SHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNI------------------- 358
G + +VD W+ G EMI G+ F +++ L I
Sbjct: 192 MGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELP 251
Query: 359 VKKPLTFPTQSPSSMSEY------HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGL 412
+ K TF S DL+S +L DP R+ ++ D HP+FK L
Sbjct: 252 LWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISAR----DAMNHPYFKDL 307
Query: 413 N 413
+
Sbjct: 308 D 308
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 73/169 (43%), Gaps = 27/169 (15%)
Query: 81 DFDLHRRIGAGDIGTV---YLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAE 137
D++L IG+G V Y K R + C +M E
Sbjct: 16 DYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMD----------------E 59
Query: 138 MEKKILKM--LDHPFLPTLYAEFEASNFSCIVMEFCSGGD-LHSLRH---KQPHKRFSLT 191
+ K+I M HP + + Y F + +VM+ SGG L ++H K HK L
Sbjct: 60 LLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLD 119
Query: 192 SARFYAA--EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ EVL LEYLH G I+RD+K N+L+ DG + ++DF +S
Sbjct: 120 ESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVS 168
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 109/301 (36%), Gaps = 87/301 (28%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E +LK L HP + +L + +V EF DL + + + + Y
Sbjct: 69 EISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDEN-KTGLQDSQIKIYLY 126
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
++L + + H I++RDLKP+N+L+ SDG + L+DF L+
Sbjct: 127 QLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLA-------------------- 166
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
R FG P R + E V T Y +P+V
Sbjct: 167 -------------------RAFG-------IPVRSYTHEVV---------TLWYRAPDVL 191
Query: 319 SGG-SHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNI------------------- 358
G + +VD W+ G EMI G+ F +++ L I
Sbjct: 192 MGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELP 251
Query: 359 VKKPLTFPTQSPSSMSEY------HARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGL 412
+ K TF S DL+S +L DP R+ ++ D HP+FK L
Sbjct: 252 LWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISAR----DAMNHPYFKDL 307
Query: 413 N 413
+
Sbjct: 308 D 308
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 55/104 (52%), Gaps = 8/104 (7%)
Query: 309 THEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFA-APSN--ETTLRNIVKKPLTF 365
T +V+PEV + D W+ GI +Y M+ G TPFA PS+ E L I T
Sbjct: 188 TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTL 247
Query: 366 PTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFF 409
+ +++SE A+DL+S +L+ DP RL +K+ V HP+
Sbjct: 248 SGGNWNTVSET-AKDLVSKMLHVDPHQRLTAKQ----VLQHPWV 286
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
+L+ HP + TL ++ +V E GG+L +Q K FS A F +
Sbjct: 74 LLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQ--KFFSEREASFVLHTIG 131
Query: 202 VALEYLHMLGIIYRDLKPENVL 223
+EYLH G+++RDLKP N+L
Sbjct: 132 KTVEYLHSQGVVHRDLKPSNIL 153
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 56/99 (56%), Gaps = 8/99 (8%)
Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAE 199
K +++++D LY E + + +VME+C G + + P KRF + A Y +
Sbjct: 66 KNVIQLVD-----VLYNEEKQKMY--MVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQ 117
Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
++ LEYLH GI+++D+KP N+L+ + G + +S ++
Sbjct: 118 LIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVA 156
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 59/131 (45%), Gaps = 16/131 (12%)
Query: 287 TLTPNRLFVAE---PVAAR-SC-SFVGTHEYVSPEVASGGS--HGNAVDWWAFGIFIYEM 339
TL + L VAE P AA +C + G+ + PE+A+G G VD W+ G+ +Y +
Sbjct: 147 TLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNI 206
Query: 340 IYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRG 399
G PF + NI K P +S DL+ G+L +P R ++
Sbjct: 207 TTGLYPFEGDNIYKLFENIGKGSYAIPGDCGPPLS-----DLLKGMLEYEPAKRFSIRQ- 260
Query: 400 AADVKTHPFFK 410
++ H +F+
Sbjct: 261 ---IRQHSWFR 268
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/308 (22%), Positives = 110/308 (35%), Gaps = 65/308 (21%)
Query: 111 HEPCCL-YAMXXXXXXXXXXXXXXHRAEMEKKILKMLD-------HPFLPTLYAEFEASN 162
H+P C YA+ E+ + LK +D HP + L +E +
Sbjct: 25 HKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNT 84
Query: 163 FSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENV 222
F +V + G+L ++ S R +L + LH L I++RDLKPEN+
Sbjct: 85 FFFLVFDLMKKGELFDYLTEKV--TLSEKETRKIMRALLEVICALHKLNIVHRDLKPENI 142
Query: 223 LVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGS 282
L+ D +I L+DF S +
Sbjct: 143 LLDDDMNIKLTDFGFSC--------------------------------------QLDPG 164
Query: 283 KKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYG 342
+K++ + ++A + CS H EV D W+ G+ +Y ++ G
Sbjct: 165 EKLREVCGTPSYLAPEII--ECSMNDNHPGYGKEV----------DMWSTGVIMYTLLAG 212
Query: 343 RTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAAD 402
PF LR I+ F + S+ +DL+S L P R ++ A
Sbjct: 213 SPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSD-TVKDLVSRFLVVQPQKRYTAEEALA- 270
Query: 403 VKTHPFFK 410
HPFF+
Sbjct: 271 ---HPFFQ 275
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/308 (22%), Positives = 110/308 (35%), Gaps = 65/308 (21%)
Query: 111 HEPCCL-YAMXXXXXXXXXXXXXXHRAEMEKKILKMLD-------HPFLPTLYAEFEASN 162
H+P C YA+ E+ + LK +D HP + L +E +
Sbjct: 38 HKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNT 97
Query: 163 FSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENV 222
F +V + G+L ++ S R +L + LH L I++RDLKPEN+
Sbjct: 98 FFFLVFDLMKKGELFDYLTEKV--TLSEKETRKIMRALLEVICALHKLNIVHRDLKPENI 155
Query: 223 LVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGS 282
L+ D +I L+DF S +
Sbjct: 156 LLDDDMNIKLTDFGFSC--------------------------------------QLDPG 177
Query: 283 KKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYG 342
+K++ + ++A + CS H EV D W+ G+ +Y ++ G
Sbjct: 178 EKLREVCGTPSYLAPEII--ECSMNDNHPGYGKEV----------DMWSTGVIMYTLLAG 225
Query: 343 RTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAAD 402
PF LR I+ F + S+ +DL+S L P R ++ A
Sbjct: 226 SPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDT-VKDLVSRFLVVQPQKRYTAEEALA- 283
Query: 403 VKTHPFFK 410
HPFF+
Sbjct: 284 ---HPFFQ 288
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/315 (20%), Positives = 112/315 (35%), Gaps = 77/315 (24%)
Query: 86 RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKKILKM 145
RIG G G V+ ++N+ +Q + + E +L
Sbjct: 29 ERIGKGSFGEVF-KGIDNRTQQ----------VVAIKIIDLEEAEDEIEDIQQEITVLSQ 77
Query: 146 LDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALE 205
D ++ Y + + I+ME+ GG L P F + + E+L L+
Sbjct: 78 CDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIAT---MLKEILKGLD 134
Query: 206 YLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYT 265
YLH I+RD+K NVL+ G + L+DF ++
Sbjct: 135 YLHSEKKIHRDIKAANVLLSEQGDVKLADFGVA--------------------------G 168
Query: 266 RQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGN 325
+ T++ R N F G T +++PEV ++ +
Sbjct: 169 QLTDTQIKR--NTFVG---------------------------TPFWMAPEVIQQSAYDS 199
Query: 326 AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHA--RDLIS 383
D W+ GI E+ G P S+ +R + P P P+ + ++ ++ I
Sbjct: 200 KADIWSLGITAIELAKGEPP---NSDMHPMRVLFLIPKNNP---PTLVGDFTKSFKEFID 253
Query: 384 GLLNKDPCNRLGSKR 398
LNKDP R +K
Sbjct: 254 ACLNKDPSFRPTAKE 268
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/334 (22%), Positives = 120/334 (35%), Gaps = 81/334 (24%)
Query: 82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
F++ +G G VY C +Q +P L + E
Sbjct: 55 FEVESELGRGATSIVYRC------KQKGTQKPYALKVLKKTVDKKI--------VRTEIG 100
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
+L L HP + L FE +V+E +GG+L ++ + +S A ++L
Sbjct: 101 VLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGY--YSERDAADAVKQIL 158
Query: 202 VALEYLHMLGIIYRDLKPENVLVRS---DGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
A+ YLH GI++RDLKPEN+L + D + ++DF LS
Sbjct: 159 EAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLS------------------KI 200
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
Q + TP P R C++ PEV
Sbjct: 201 VEHQVLMKTVCG------------------TPG---YCAPEILRGCAY-------GPEV- 231
Query: 319 SGGSHGNAVDWWAFGIFIYEMIYGRTPFAAP-SNETTLRNIVKKPLTFPTQSPSSMSEYH 377
D W+ GI Y ++ G PF ++ R I+ F + +S +
Sbjct: 232 ---------DMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVS-LN 281
Query: 378 ARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG 411
A+DL+ L+ DP RL + + HP+ G
Sbjct: 282 AKDLVRKLIVLDPKKRLTTFQAL----QHPWVTG 311
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Query: 308 GTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPT 367
GT E+V+PE+ + G D W+ G+ Y ++ G +PF + + TL NI F
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDE 239
Query: 368 QSPSSMSEYHARDLISGLLNKDPCNRL 394
+ S+ SE A+D I LL KDP R+
Sbjct: 240 EYFSNTSEL-AKDFIRRLLVKDPKRRM 265
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 57/110 (51%), Gaps = 8/110 (7%)
Query: 135 RAEMEKK--ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTS 192
R E+E++ IL+ + HP + TL+ FE +++E SGG+L ++ + +
Sbjct: 59 REEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEK--ESLTEDE 116
Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDG----HIMLSDFDLS 238
A + ++L + YLH I + DLKPEN+++ I L DF ++
Sbjct: 117 ATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 166
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Query: 308 GTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPT 367
GT E+V+PE+ + G D W+ G+ Y ++ G +PF + + TL NI F
Sbjct: 194 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDE 253
Query: 368 QSPSSMSEYHARDLISGLLNKDPCNRL 394
+ S+ SE A+D I LL KDP R+
Sbjct: 254 EYFSNTSEL-AKDFIRRLLVKDPKRRM 279
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 58/112 (51%), Gaps = 12/112 (10%)
Query: 135 RAEMEKK--ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLT- 191
R E+E++ IL+ + HP + TL+ FE +++E SGG+L ++ SLT
Sbjct: 73 REEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKE----SLTE 128
Query: 192 -SARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDG----HIMLSDFDLS 238
A + ++L + YLH I + DLKPEN+++ I L DF ++
Sbjct: 129 DEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 180
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 74/180 (41%), Gaps = 16/180 (8%)
Query: 67 RSATFGRKTGLTFRD-FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXX 125
R + F F D +D+ +G G V C H+ L
Sbjct: 15 RGSEFMMNASTKFSDNYDVKEELGKGAFSVVRRCV----------HKTTGLEFAAKIINT 64
Query: 126 XXXXXXXXHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPH 185
+ E E +I + L HP + L+ + +F +V + +GG+L
Sbjct: 65 KKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL--FEDIVAR 122
Query: 186 KRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGH---IMLSDFDLSLCSN 242
+ +S A ++L ++ Y H GI++R+LKPEN+L+ S + L+DF L++ N
Sbjct: 123 EFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN 182
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 1/94 (1%)
Query: 306 FVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTF 365
F GT Y+SPEV + VD WA G+ +Y ++ G PF I +
Sbjct: 190 FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDY 249
Query: 366 PTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRG 399
P+ +++ A+ LI +L +P R+ + +
Sbjct: 250 PSPEWDTVTP-EAKSLIDSMLTVNPKKRITADQA 282
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 55/125 (44%), Gaps = 16/125 (12%)
Query: 307 VGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFP 366
GT E+ +PEVA G G D W+ G+ Y ++ G +PF +++ TLRN+
Sbjct: 317 TGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMD 376
Query: 367 TQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEIP 426
+ S +SE +D I LL DP R+ + HP+ LTP P
Sbjct: 377 DSAFSGISE-DGKDFIRKLLLADPNTRMTIHQALE----HPW-----------LTPGNAP 420
Query: 427 GMRRQ 431
G Q
Sbjct: 421 GRDSQ 425
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 15/159 (9%)
Query: 82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
+D+H +G G G V+ + + G+ + M E +
Sbjct: 159 YDIHEELGTGAFGVVHRVT-----ERATGNNFAAKFVMTPHESDKET-------VRKEIQ 206
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
+ +L HP L L+ FE N ++ EF SGG+L + H + S A Y +V
Sbjct: 207 TMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFE-KVADEHNKMSEDEAVEYMRQVC 265
Query: 202 VALEYLHMLGIIYRDLKPENVL--VRSDGHIMLSDFDLS 238
L ++H ++ DLKPEN++ + + L DF L+
Sbjct: 266 KGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLT 304
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Query: 308 GTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPT 367
GT E+V+PE+ + G D W+ G+ Y ++ G +PF + + TL NI F
Sbjct: 173 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDE 232
Query: 368 QSPSSMSEYHARDLISGLLNKDPCNRL 394
+ S+ SE A+D I LL KDP R+
Sbjct: 233 EYFSNTSEL-AKDFIRRLLVKDPKRRM 258
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 58/112 (51%), Gaps = 12/112 (10%)
Query: 135 RAEMEKK--ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLT- 191
R E+E++ IL+ + HP + TL+ FE +++E SGG+L ++ SLT
Sbjct: 52 REEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKE----SLTE 107
Query: 192 -SARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDG----HIMLSDFDLS 238
A + ++L + YLH I + DLKPEN+++ I L DF ++
Sbjct: 108 DEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 159
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 73/171 (42%), Gaps = 34/171 (19%)
Query: 82 FDLHRRIGAGDIGTVYLCS--------LNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXX 133
F R++G+G G V+L + +DR P
Sbjct: 24 FIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVP-------------------M 64
Query: 134 HRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSA 193
+ E E ++LK LDHP + ++ FE + IVME C GG+L R R S
Sbjct: 65 EQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLE-RIVSAQARGKALSE 123
Query: 194 RFYAA---EVLVALEYLHMLGIIYRDLKPENVLVRSD---GHIMLSDFDLS 238
+ A +++ AL Y H ++++DLKPEN+L + I + DF L+
Sbjct: 124 GYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLA 174
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 46/108 (42%), Gaps = 7/108 (6%)
Query: 303 SCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKP 362
S + GT Y++PEV D W+ G+ +Y ++ G PF S E + K
Sbjct: 183 STNAAGTALYMAPEVFKRDVTFKC-DIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKE 241
Query: 363 LTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
+ + + A DL+ +L KDP R AA V H +FK
Sbjct: 242 PNYAVECRPLTPQ--AVDLLKQMLTKDPERR----PSAAQVLHHEWFK 283
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 5/103 (4%)
Query: 308 GTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPT 367
GT E+V+PE+ + G D W+ G+ Y ++ G +PF + + TL N+ F
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 368 QSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
+ S+ S A+D I LL KDP R+ + D HP+ K
Sbjct: 239 EYFSNTSAL-AKDFIRRLLVKDPKKRMTIQ----DSLQHPWIK 276
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 137 EMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFY 196
E E ILK + HP + TL+ +E +++E +GG+L ++ + + A +
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEF 119
Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLV 224
++L + YLH L I + DLKPEN+++
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIML 147
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 119/323 (36%), Gaps = 93/323 (28%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASN------FSCIVMEFCSGGDLHSLRHKQPHKR-FSLT 191
E +I++++ HP + L A F ++ F +V+E+ + RH K+ +
Sbjct: 82 ELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPML 141
Query: 192 SARFYAAEVLVALEYLHMLGIIYRDLKPENVLVR-SDGHIMLSDFDLSLCSNAIXXXXXX 250
+ Y ++L +L Y+H +GI +RD+KP+N+L+ G + L D
Sbjct: 142 LIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLID---------------- 185
Query: 251 XXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTH 310
FGS KI L EP + CS
Sbjct: 186 -----------------------------FGSAKI-------LIAGEPNVSXICS----R 205
Query: 311 EYVSPEVASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT----- 364
Y +PE+ G + + +D W+ G + E++ G+ F S L I+K T
Sbjct: 206 YYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQ 265
Query: 365 ------------FPTQSPSSMSEY-------HARDLISGLLNKDPCNRLGSKRGAADVKT 405
FP P S+ A DLIS LL P RL A +
Sbjct: 266 IKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARL----TAIEALC 321
Query: 406 HPFFKGLNFALIRSLTPPEIPGM 428
HPFF L R E+P +
Sbjct: 322 HPFFDELRTGEARMPNGRELPPL 344
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 57/109 (52%), Gaps = 5/109 (4%)
Query: 134 HRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSA 193
+ E E +I ++L HP + L+ F +V + +GG+L + +S A
Sbjct: 48 QKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGEL--FEDIVAREYYSEADA 105
Query: 194 RFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGH---IMLSDFDLSL 239
++L ++ + H+ GI++RDLKPEN+L+ S + L+DF L++
Sbjct: 106 SHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAI 154
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 5/104 (4%)
Query: 306 FVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTF 365
F GT Y+SPEV +G VD WA G+ +Y ++ G PF + I F
Sbjct: 166 FAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDF 225
Query: 366 PTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFF 409
P+ +++ A+DLI+ +L +P R+ A++ HP+
Sbjct: 226 PSPEWDTVTP-EAKDLINKMLTINPAKRI----TASEALKHPWI 264
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 5/103 (4%)
Query: 308 GTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPT 367
GT E+V+PE+ + G D W+ G+ Y ++ G +PF + + TL N+ F
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 368 QSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
+ S+ S A+D I LL KDP R+ + D HP+ K
Sbjct: 239 EYFSNTSAL-AKDFIRRLLVKDPKKRMTIQ----DSLQHPWIK 276
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 137 EMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFY 196
E E ILK + HP + TL+ +E +++E +GG+L ++ + + A +
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEF 119
Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLV 224
++L + YLH L I + DLKPEN+++
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIML 147
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 5/103 (4%)
Query: 308 GTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPT 367
GT E+V+PE+ + G D W+ G+ Y ++ G +PF + + TL N+ F
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 368 QSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
+ S+ S A+D I LL KDP R+ + D HP+ K
Sbjct: 239 EYFSNTSAL-AKDFIRRLLVKDPKKRMTIQ----DSLQHPWIK 276
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 137 EMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFY 196
E E ILK + HP + TL+ +E +++E +GG+L ++ + + A +
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEF 119
Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLV 224
++L + YLH L I + DLKPEN+++
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIML 147
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 5/103 (4%)
Query: 308 GTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPT 367
GT E+V+PE+ + G D W+ G+ Y ++ G +PF + + TL N+ F
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 368 QSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
+ S+ S A+D I LL KDP R+ + D HP+ K
Sbjct: 239 EYFSNTSAL-AKDFIRRLLVKDPKKRMTIQ----DSLQHPWIK 276
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 137 EMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFY 196
E E ILK + HP + TL+ +E +++E +GG+L ++ + + A +
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEF 119
Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLV 224
++L + YLH L I + DLKPEN+++
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIML 147
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 94/282 (33%), Gaps = 72/282 (25%)
Query: 70 TFGRKTG-LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXX 128
T +K G L DF+ +GAG+ G V+ S H+P L M
Sbjct: 57 TQKQKVGELKDDDFEKISELGAGNGGVVFKVS----------HKPSGL-VMARKLIHLEI 105
Query: 129 XXXXXHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRF 188
++ E ++L + P++ Y F + I ME GG L + K R
Sbjct: 106 KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA--GRI 163
Query: 189 SLTSARFYAAEVLVALEYL-HMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXX 247
+ V+ L YL I++RD+KP N+LV S G I L DF +S
Sbjct: 164 PEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS--------- 214
Query: 248 XXXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFV 307
+ N F G
Sbjct: 215 ---------------------GQLIDSMANSFVG-------------------------- 227
Query: 308 GTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAP 349
T Y+SPE G + D W+ G+ + EM GR P P
Sbjct: 228 -TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPP 268
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 5/103 (4%)
Query: 308 GTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPT 367
GT E+V+PE+ + G D W+ G+ Y ++ G +PF + + TL N+ F
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 368 QSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
+ S+ S A+D I LL KDP R+ + D HP+ K
Sbjct: 239 EYFSNTSAL-AKDFIRRLLVKDPKKRMTIQ----DSLQHPWIK 276
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 137 EMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFY 196
E E ILK + HP + TL+ +E +++E +GG+L ++ + + A +
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEF 119
Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLV 224
++L + YLH L I + DLKPEN+++
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIML 147
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 112/318 (35%), Gaps = 108/318 (33%)
Query: 135 RAEMEKKILKMLDHPFLPTLYAEF------EASNFSCIVMEFCSGGDLHSLRHKQPHKRF 188
RA E +LK ++H + +L F E +VME + + H+R
Sbjct: 67 RAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERM 126
Query: 189 SLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXX 248
S + ++L +++LH GII+RDLKP N++V+SD + + DF L+
Sbjct: 127 S-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA---------- 171
Query: 249 XXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVG 308
R ST +TP +V
Sbjct: 172 -----------------RTASTNF--------------MMTP---------------YVV 185
Query: 309 THEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPF----------------AAPSNE 352
T Y +PEV G + VD W+ G + E++ G F PS E
Sbjct: 186 TRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAE 245
Query: 353 ------TTLRNIVKK--------------PLTFPTQSP-SSMSEYHARDLISGLLNKDPC 391
T+RN V+ FP++S + ARDL+S +L DP
Sbjct: 246 FMAALQPTVRNYVENRPAYPGIAFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPD 305
Query: 392 NRLGSKRGAADVKTHPFF 409
R+ HP+
Sbjct: 306 KRISVDEAL----RHPYI 319
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 57/109 (52%), Gaps = 5/109 (4%)
Query: 134 HRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSA 193
+ E E +I ++L HP + L+ F +V + +GG+L + +S A
Sbjct: 48 QKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGEL--FEDIVAREYYSEADA 105
Query: 194 RFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGH---IMLSDFDLSL 239
++L ++ + H+ GI++RDLKPEN+L+ S + L+DF L++
Sbjct: 106 SHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAI 154
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 5/105 (4%)
Query: 305 SFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT 364
F GT Y+SPEV +G VD WA G+ +Y ++ G PF + I
Sbjct: 165 GFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYD 224
Query: 365 FPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFF 409
FP+ +++ A+DLI+ +L +P R+ A++ HP+
Sbjct: 225 FPSPEWDTVTP-EAKDLINKMLTINPAKRI----TASEALKHPWI 264
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 5/103 (4%)
Query: 308 GTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPT 367
GT E+V+PE+ + G D W+ G+ Y ++ G +PF + + TL N+ F
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 368 QSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
+ S+ S A+D I LL KDP R+ + D HP+ K
Sbjct: 239 EYFSNTSAL-AKDFIRRLLVKDPKKRMTIQ----DSLQHPWIK 276
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 137 EMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFY 196
E E ILK + HP + TL+ +E +++E +GG+L ++ + + A +
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEF 119
Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLV 224
++L + YLH L I + DLKPEN+++
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIML 147
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 5/103 (4%)
Query: 308 GTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPT 367
GT E+V+PE+ + G D W+ G+ Y ++ G +PF + + TL N+ F
Sbjct: 178 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 237
Query: 368 QSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
+ S+ S A+D I LL KDP R+ + D HP+ K
Sbjct: 238 EYFSNTSAL-AKDFIRRLLVKDPKKRMTIQ----DSLQHPWIK 275
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 137 EMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFY 196
E E ILK + HP + TL+ +E +++E +GG+L ++ + + A +
Sbjct: 61 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEF 118
Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLV 224
++L + YLH L I + DLKPEN+++
Sbjct: 119 LKQILNGVYYLHSLQIAHFDLKPENIML 146
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 5/103 (4%)
Query: 308 GTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPT 367
GT E+V+PE+ + G D W+ G+ Y ++ G +PF + + TL N+ F
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 368 QSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
+ S+ S A+D I LL KDP R+ + D HP+ K
Sbjct: 239 EYFSNTSAL-AKDFIRRLLVKDPKKRMTIQ----DSLQHPWIK 276
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 137 EMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFY 196
E E ILK + HP + TL+ +E +++E +GG+L ++ + + A +
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEF 119
Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLV 224
++L + YLH L I + DLKPEN+++
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIML 147
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 5/103 (4%)
Query: 308 GTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPT 367
GT E+V+PE+ + G D W+ G+ Y ++ G +PF + + TL N+ F
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 368 QSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
+ S+ S A+D I LL KDP R+ + D HP+ K
Sbjct: 239 EYFSNTSAL-AKDFIRRLLVKDPKKRMTIQ----DSLQHPWIK 276
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 137 EMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFY 196
E E ILK + HP + TL+ +E +++E +GG+L ++ + + A +
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEF 119
Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLV 224
++L + YLH L I + DLKPEN+++
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIML 147
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 5/105 (4%)
Query: 305 SFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT 364
F GT Y+SPEV +G VD WA G+ +Y ++ G PF + I
Sbjct: 183 GFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYD 242
Query: 365 FPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFF 409
FP+ +++ A+DLI+ +L +P R+ AA+ HP+
Sbjct: 243 FPSPEWDTVTP-EAKDLINKMLTINPSKRI----TAAEALKHPWI 282
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 56/109 (51%), Gaps = 5/109 (4%)
Query: 134 HRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSA 193
+ E E +I ++L HP + L+ ++ + +GG+L + +S A
Sbjct: 66 QKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGEL--FEDIVAREYYSEADA 123
Query: 194 RFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSD---GHIMLSDFDLSL 239
++L A+ + H +G+++RDLKPEN+L+ S + L+DF L++
Sbjct: 124 SHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAI 172
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 5/103 (4%)
Query: 308 GTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPT 367
GT E+V+PE+ + G D W+ G+ Y ++ G +PF + + TL N+ F
Sbjct: 178 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 237
Query: 368 QSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
+ S+ S A+D I LL KDP R+ + D HP+ K
Sbjct: 238 EYFSNTSAL-AKDFIRRLLVKDPKKRMTIQ----DSLQHPWIK 275
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 137 EMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFY 196
E E ILK + HP + TL+ +E +++E +GG+L ++ + + A +
Sbjct: 61 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEF 118
Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLV 224
++L + YLH L I + DLKPEN+++
Sbjct: 119 LKQILNGVYYLHSLQIAHFDLKPENIML 146
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 5/103 (4%)
Query: 308 GTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPT 367
GT E+V+PE+ + G D W+ G+ Y ++ G +PF + + TL N+ F
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 368 QSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
+ S+ S A+D I LL KDP R+ + D HP+ K
Sbjct: 239 EYFSNTSAL-AKDFIRRLLVKDPKKRMTIQ----DSLQHPWIK 276
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 137 EMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFY 196
E E ILK + HP + TL+ +E +++E +GG+L ++ + + A +
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEF 119
Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLV 224
++L + YLH L I + DLKPEN+++
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIML 147
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 113/318 (35%), Gaps = 108/318 (33%)
Query: 135 RAEMEKKILKMLDHPFLPTLYAEF------EASNFSCIVMEFCSGGDLHSLRHKQPHKRF 188
RA E +LK ++H + +L F E +VME + + H+R
Sbjct: 69 RAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERM 128
Query: 189 SLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXX 248
S + ++L +++LH GII+RDLKP N++V+SD + + DF L+
Sbjct: 129 S-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA---------- 173
Query: 249 XXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVG 308
T + F+ +TP +V
Sbjct: 174 --------------------RTACTNFM-----------MTP---------------YVV 187
Query: 309 THEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPF----------------AAPSNE 352
T Y +PEV G + VD W+ G + E++ G F PS E
Sbjct: 188 TRYYRAPEVILGMGYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPSAE 247
Query: 353 ------TTLRNIVKK--------------PLTFPTQSP-SSMSEYHARDLISGLLNKDPC 391
T+RN V+ FP++S + ARDL+S +L DP
Sbjct: 248 FMAALQPTVRNYVENRPKYPGIKFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPD 307
Query: 392 NRLGSKRGAADVKTHPFF 409
R+ HP+
Sbjct: 308 KRISVDEAL----RHPYI 321
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 5/103 (4%)
Query: 308 GTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPT 367
GT E+V+PE+ + G D W+ G+ Y ++ G +PF + + TL N+ F
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 368 QSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
+ S+ S A+D I LL KDP R+ + D HP+ K
Sbjct: 239 EYFSNTSAL-AKDFIRRLLVKDPKKRMTIQ----DSLQHPWIK 276
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 47/88 (53%), Gaps = 2/88 (2%)
Query: 137 EMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFY 196
E E ILK + HP + TL+ +E ++ E +GG+L ++ + + A +
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEK--ESLTEEEATEF 119
Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLV 224
++L + YLH L I + DLKPEN+++
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIML 147
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 89/214 (41%), Gaps = 65/214 (30%)
Query: 138 MEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRH-KQPHKRFSLTSARFY 196
+E + L ++HP + LY N C+VME+ GG L+++ H +P ++ A +
Sbjct: 51 VELRQLSRVNHPNIVKLYGA--CLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW 108
Query: 197 AAEVLVALEYLHML---GIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXX 253
+ + YLH + +I+RDLKP N+L+ + G + L +C
Sbjct: 109 CLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTV------LKICD------------ 150
Query: 254 XXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQT-LTPNRLFVAEPVAARSCSFVGTHEY 312
F + IQT +T N+ G+ +
Sbjct: 151 -------------------------FGTACDIQTHMTNNK---------------GSAAW 170
Query: 313 VSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPF 346
++PEV G ++ D +++GI ++E+I R PF
Sbjct: 171 MAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPF 204
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 11/105 (10%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGG---DLHSLRHKQPHKRFSLTSARF 195
E I++ D P + Y + + IVME+C G D+ LR+K +LT
Sbjct: 74 EISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNK------TLTEDEI 127
Query: 196 YA--AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
L LEYLH + I+RD+K N+L+ ++GH L+DF ++
Sbjct: 128 ATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVA 172
Score = 35.4 bits (80), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 52/123 (42%), Gaps = 11/123 (8%)
Query: 301 ARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK 360
A+ +GT +++PEV + D W+ GI EM G+ P+A + +R I
Sbjct: 180 AKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYA---DIHPMRAIFM 236
Query: 361 KPLTFPT--QSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLN-FALI 417
P P + P S+ + D + L K P R A + HPF + +++
Sbjct: 237 IPTNPPPTFRKPELWSD-NFTDFVKQCLVKSPEQR----ATATQLLQHPFVRSAKGVSIL 291
Query: 418 RSL 420
R L
Sbjct: 292 RDL 294
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 5/105 (4%)
Query: 305 SFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT 364
F GT Y+SPEV +G VD WA G+ +Y ++ G PF + I
Sbjct: 172 GFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYD 231
Query: 365 FPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFF 409
FP+ +++ A+DLI+ +L +P R+ AA+ HP+
Sbjct: 232 FPSPEWDTVTP-EAKDLINKMLTINPSKRI----TAAEALKHPWI 271
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 56/109 (51%), Gaps = 5/109 (4%)
Query: 134 HRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSA 193
+ E E +I ++L HP + L+ ++ + +GG+L + +S A
Sbjct: 55 QKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGEL--FEDIVAREYYSEADA 112
Query: 194 RFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSD---GHIMLSDFDLSL 239
++L A+ + H +G+++R+LKPEN+L+ S + L+DF L++
Sbjct: 113 SHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAI 161
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 59/126 (46%), Gaps = 7/126 (5%)
Query: 308 GTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPT 367
GT E+V+PE+ + G D W+ G+ Y ++ G +PF + + TL NI F
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDE 239
Query: 368 QSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNF--ALIRSLTPPEI 425
+ S SE A+D I LL K+ RL + HP+ ++ A++R + +
Sbjct: 240 EFFSQTSEL-AKDFIRKLLVKETRKRLTIQEAL----RHPWITPVDNQQAMVRRESVVNL 294
Query: 426 PGMRRQ 431
R+Q
Sbjct: 295 ENFRKQ 300
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 57/110 (51%), Gaps = 8/110 (7%)
Query: 135 RAEMEKK--ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTS 192
R E+E++ IL+ + H + TL+ +E +++E SGG+L ++ + S
Sbjct: 59 REEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK--ESLSEEE 116
Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDG----HIMLSDFDLS 238
A + ++L + YLH I + DLKPEN+++ HI L DF L+
Sbjct: 117 ATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 89/214 (41%), Gaps = 65/214 (30%)
Query: 138 MEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRH-KQPHKRFSLTSARFY 196
+E + L ++HP + LY N C+VME+ GG L+++ H +P ++ A +
Sbjct: 50 VELRQLSRVNHPNIVKLYGA--CLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW 107
Query: 197 AAEVLVALEYLHML---GIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXX 253
+ + YLH + +I+RDLKP N+L+ + G + L +C
Sbjct: 108 CLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTV------LKICD------------ 149
Query: 254 XXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQT-LTPNRLFVAEPVAARSCSFVGTHEY 312
F + IQT +T N+ G+ +
Sbjct: 150 -------------------------FGTACDIQTHMTNNK---------------GSAAW 169
Query: 313 VSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPF 346
++PEV G ++ D +++GI ++E+I R PF
Sbjct: 170 MAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPF 203
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 5/103 (4%)
Query: 308 GTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPT 367
GT E+V+PE+ + G D W+ G+ Y ++ G +PF + + TL N+ F
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 368 QSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
+ S+ S A+D I LL KDP R+ + D HP+ K
Sbjct: 239 EYFSNTSAL-AKDFIRRLLVKDPKKRMTIQ----DSLQHPWIK 276
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 137 EMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFY 196
E E ILK + HP + TL+ +E +++E +GG+L ++ + + A +
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEF 119
Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLV 224
++L + YLH L I + DLKPEN+++
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIML 147
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 59/126 (46%), Gaps = 7/126 (5%)
Query: 308 GTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPT 367
GT E+V+PE+ + G D W+ G+ Y ++ G +PF + + TL NI F
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDE 239
Query: 368 QSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNF--ALIRSLTPPEI 425
+ S SE A+D I LL K+ RL + HP+ ++ A++R + +
Sbjct: 240 EFFSQTSEL-AKDFIRKLLVKETRKRLTIQEAL----RHPWITPVDNQQAMVRRESVVNL 294
Query: 426 PGMRRQ 431
R+Q
Sbjct: 295 ENFRKQ 300
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 57/110 (51%), Gaps = 8/110 (7%)
Query: 135 RAEMEKK--ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTS 192
R E+E++ IL+ + H + TL+ +E +++E SGG+L ++ + S
Sbjct: 59 REEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK--ESLSEEE 116
Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDG----HIMLSDFDLS 238
A + ++L + YLH I + DLKPEN+++ HI L DF L+
Sbjct: 117 ATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 82/206 (39%), Gaps = 61/206 (29%)
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
++ A+E+LH G+++RDLKP N+ D + + DF L +
Sbjct: 126 QIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQ--------------- 170
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
++ LTP P AR VGT Y+SPE
Sbjct: 171 ----------------------DEEEQTVLTPM------PAYARHTGQVGTKLYMSPEQI 202
Query: 319 SGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNE----TTLRNIVKKPL---TFPTQ--- 368
G S+ + VD ++ G+ ++E++Y PF+ T +RN+ PL +P +
Sbjct: 203 HGNSYSHKVDIFSLGLILFELLY---PFSTQMERVRTLTDVRNLKFPPLFTQKYPCEYVM 259
Query: 369 -----SPSSMSEYHARDLISGLLNKD 389
SPS M A ++I + +D
Sbjct: 260 VQDMLSPSPMERPEAINIIENAVFED 285
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 58/112 (51%), Gaps = 5/112 (4%)
Query: 134 HRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSA 193
+ E E +I + L HP + L+ + +F +V + +GG+L + +S A
Sbjct: 50 QKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL--FEDIVAREFYSEADA 107
Query: 194 RFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGH---IMLSDFDLSLCSN 242
++L ++ Y H GI++R+LKPEN+L+ S + L+DF L++ N
Sbjct: 108 SHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN 159
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 1/94 (1%)
Query: 306 FVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTF 365
F GT Y+SPEV + VD WA G+ +Y ++ G PF I +
Sbjct: 167 FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDY 226
Query: 366 PTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRG 399
P+ +++ A+ LI +L +P R+ + +
Sbjct: 227 PSPEWDTVTP-EAKSLIDSMLTVNPKKRITADQA 259
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 95/257 (36%), Gaps = 68/257 (26%)
Query: 137 EMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFY 196
+ E +L D P++ + + S I+ME+ GG L P + + +
Sbjct: 65 QQEITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIATI--- 121
Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXX 256
E+L L+YLH I+RD+K NVL+ G + L+DF ++
Sbjct: 122 LREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVA------------------ 163
Query: 257 XXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE 316
+ T++ R N F G T +++PE
Sbjct: 164 --------GQLTDTQIKR--NXFVG---------------------------TPFWMAPE 186
Query: 317 VASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEY 376
V ++ D W+ GI E+ G P S+ +R + P SP ++
Sbjct: 187 VIKQSAYDFKADIWSLGITAIELAKGEPP---NSDLHPMRVL----FLIPKNSPPTLEGQ 239
Query: 377 HA---RDLISGLLNKDP 390
H+ ++ + LNKDP
Sbjct: 240 HSKPFKEFVEACLNKDP 256
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 8/93 (8%)
Query: 309 THEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETT-------LRNIVKK 361
T Y +PE+ + + + D W+ G+ +Y M+ G+ PF + T ++ I K
Sbjct: 172 TLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKG 231
Query: 362 PLTFPTQSPSSMSEYHARDLISGLLNKDPCNRL 394
+F ++ ++S+ A+DLI GLL DP RL
Sbjct: 232 DFSFEGEAWKNVSQ-EAKDLIQGLLTVDPNKRL 263
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 55/92 (59%), Gaps = 5/92 (5%)
Query: 135 RAEMEKKI--LKMLD-HPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLT 191
A +K+I LK+ + HP + L+ F + +VME +GG+L K+ H FS T
Sbjct: 49 EANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKH--FSET 106
Query: 192 SARFYAAEVLVALEYLHMLGIIYRDLKPENVL 223
A + +++ A+ ++H +G+++RDLKPEN+L
Sbjct: 107 EASYIMRKLVSAVSHMHDVGVVHRDLKPENLL 138
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 58/112 (51%), Gaps = 5/112 (4%)
Query: 134 HRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSA 193
+ E E +I + L HP + L+ + +F +V + +GG+L + +S A
Sbjct: 49 QKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL--FEDIVAREFYSEADA 106
Query: 194 RFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGH---IMLSDFDLSLCSN 242
++L ++ Y H GI++R+LKPEN+L+ S + L+DF L++ N
Sbjct: 107 SHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN 158
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 1/94 (1%)
Query: 306 FVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTF 365
F GT Y+SPEV + VD WA G+ +Y ++ G PF I +
Sbjct: 166 FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDY 225
Query: 366 PTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRG 399
P+ +++ A+ LI +L +P R+ + +
Sbjct: 226 PSPEWDTVTP-EAKSLIDSMLTVNPKKRITADQA 258
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 81/205 (39%), Gaps = 56/205 (27%)
Query: 146 LDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALE 205
L H + ++ E + +VME+ G L + + H S+ +A + ++L ++
Sbjct: 68 LSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLS--EYIESHGPLSVDTAINFTNQILDGIK 125
Query: 206 YLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYT 265
+ H + I++RD+KP+N+L+ S+ + + D
Sbjct: 126 HAHDMRIVHRDIKPQNILIDSNKTLKIFD------------------------------- 154
Query: 266 RQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGN 325
FG K ++E ++ +GT +Y SPE A G +
Sbjct: 155 --------------FGIAK---------ALSETSLTQTNHVLGTVQYFSPEQAKGEATDE 191
Query: 326 AVDWWAFGIFIYEMIYGRTPFAAPS 350
D ++ GI +YEM+ G PF +
Sbjct: 192 CTDIYSIGIVLYEMLVGEPPFNGET 216
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 58/112 (51%), Gaps = 5/112 (4%)
Query: 134 HRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSA 193
+ E E +I + L HP + L+ + +F +V + +GG+L + +S A
Sbjct: 50 QKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL--FEDIVAREFYSEADA 107
Query: 194 RFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGH---IMLSDFDLSLCSN 242
++L ++ Y H GI++R+LKPEN+L+ S + L+DF L++ N
Sbjct: 108 SHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN 159
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 1/94 (1%)
Query: 306 FVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTF 365
F GT Y+SPEV + VD WA G+ +Y ++ G PF I +
Sbjct: 167 FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDY 226
Query: 366 PTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRG 399
P+ +++ A+ LI +L +P R+ + +
Sbjct: 227 PSPEWDTVTP-EAKSLIDSMLTVNPKKRITADQA 259
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 48/99 (48%), Gaps = 9/99 (9%)
Query: 146 LDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQ---PHKRFSLTSARFYAAEVLV 202
L P + LY + I ME GG L L +Q P R A +Y + L
Sbjct: 123 LTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDR-----ALYYLGQALE 177
Query: 203 ALEYLHMLGIIYRDLKPENVLVRSDG-HIMLSDFDLSLC 240
LEYLH I++ D+K +NVL+ SDG H L DF ++C
Sbjct: 178 GLEYLHSRRILHGDVKADNVLLSSDGSHAALCDFGHAVC 216
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 56/110 (50%), Gaps = 7/110 (6%)
Query: 306 FVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTF 365
+GT EY++PE+ + A D W GI Y ++ +PF N+ T NI + + +
Sbjct: 193 IMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDY 252
Query: 366 PTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADV-KTHPFFKGLNF 414
++ SS+S+ A D I LL K+P KR A++ +H + + +F
Sbjct: 253 SEETFSSVSQL-ATDFIQSLLVKNP-----EKRPTAEICLSHSWLQQWDF 296
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 59/110 (53%), Gaps = 6/110 (5%)
Query: 135 RAEM--EKKILKMLDH-PFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLT 191
RAE+ E +L++ P + L+ +E ++ +++E+ +GG++ SL + + S
Sbjct: 72 RAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSEN 131
Query: 192 SARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSD---GHIMLSDFDLS 238
++L + YLH I++ DLKP+N+L+ S G I + DF +S
Sbjct: 132 DVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMS 181
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 59/126 (46%), Gaps = 7/126 (5%)
Query: 308 GTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPT 367
GT E+V+PE+ + G D W+ G+ Y ++ G +PF + + TL NI F
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDE 239
Query: 368 QSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNF--ALIRSLTPPEI 425
+ S SE A+D I LL K+ RL + HP+ ++ A++R + +
Sbjct: 240 EFFSHTSEL-AKDFIRKLLVKETRKRLTIQEAL----RHPWITPVDNQQAMVRRESVVNL 294
Query: 426 PGMRRQ 431
R+Q
Sbjct: 295 ENFRKQ 300
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 57/110 (51%), Gaps = 8/110 (7%)
Query: 135 RAEMEKK--ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTS 192
R E+E++ IL+ + H + TL+ +E +++E SGG+L ++ + S
Sbjct: 59 REEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK--ESLSEEE 116
Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDG----HIMLSDFDLS 238
A + ++L + YLH I + DLKPEN+++ HI L DF L+
Sbjct: 117 ATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 103/270 (38%), Gaps = 71/270 (26%)
Query: 135 RAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVME-FCSGGDLHSLRHKQPHKRFSLTSA 193
+ +E IL ++H + + FE F +VME SG DL + + P R A
Sbjct: 75 KVTLEIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHP--RLDEPLA 132
Query: 194 RFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXX 253
+ +++ A+ YL + II+RD+K EN+++ D I L D
Sbjct: 133 SYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLID------------------- 173
Query: 254 XXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYV 313
FGS L +LF +F GT EY
Sbjct: 174 --------------------------FGSAAY--LERGKLFY---------TFCGTIEYC 196
Query: 314 SPEVASGGSH-GNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSS 372
+PEV G + G ++ W+ G+ +Y +++ PF E T+ + P S
Sbjct: 197 APEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFC--ELEETVEAAIHPPYLV---SKEL 251
Query: 373 MSEYHARDLISGLLNKDPCNRLGSKRGAAD 402
MS L+SGLL P R ++ D
Sbjct: 252 MS------LVSGLLQPVPERRTTLEKLVTD 275
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 59/126 (46%), Gaps = 7/126 (5%)
Query: 308 GTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPT 367
GT E+V+PE+ + G D W+ G+ Y ++ G +PF + + TL NI F
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDE 239
Query: 368 QSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNF--ALIRSLTPPEI 425
+ S SE A+D I LL K+ RL + HP+ ++ A++R + +
Sbjct: 240 EFFSHTSEL-AKDFIRKLLVKETRKRLTIQEAL----RHPWITPVDNQQAMVRRESVVNL 294
Query: 426 PGMRRQ 431
R+Q
Sbjct: 295 ENFRKQ 300
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 57/110 (51%), Gaps = 8/110 (7%)
Query: 135 RAEMEKK--ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTS 192
R E+E++ IL+ + H + TL+ +E +++E SGG+L ++ + S
Sbjct: 59 REEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK--ESLSEEE 116
Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDG----HIMLSDFDLS 238
A + ++L + YLH I + DLKPEN+++ HI L DF L+
Sbjct: 117 ATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 48/99 (48%), Gaps = 9/99 (9%)
Query: 146 LDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQ---PHKRFSLTSARFYAAEVLV 202
L P + LY + I ME GG L L +Q P R A +Y + L
Sbjct: 142 LTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDR-----ALYYLGQALE 196
Query: 203 ALEYLHMLGIIYRDLKPENVLVRSDG-HIMLSDFDLSLC 240
LEYLH I++ D+K +NVL+ SDG H L DF ++C
Sbjct: 197 GLEYLHSRRILHGDVKADNVLLSSDGSHAALCDFGHAVC 235
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 5/106 (4%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDL--HSLRHKQPHKRFSLTSARFY 196
E I ML HP + L + + +V EF G DL ++ +S A Y
Sbjct: 76 EASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHY 135
Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLVRSDGH---IMLSDFDLSL 239
++L AL Y H II+RD+KPENVL+ S + + L DF +++
Sbjct: 136 MRQILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAI 181
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 56/124 (45%), Gaps = 6/124 (4%)
Query: 307 VGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFP 366
VGT +++PEV +G VD W G+ ++ ++ G PF + E I+K
Sbjct: 194 VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYG-TKERLFEGIIKGKYKMN 252
Query: 367 TQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEIP 426
+ S +SE A+DL+ +L DP R+ + HP+ K + + P +
Sbjct: 253 PRQWSHISE-SAKDLVRRMLMLDPAERI----TVYEALNHPWLKERDRYAYKIHLPETVE 307
Query: 427 GMRR 430
+R+
Sbjct: 308 QLRK 311
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 59/126 (46%), Gaps = 7/126 (5%)
Query: 308 GTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPT 367
GT E+V+PE+ + G D W+ G+ Y ++ G +PF + + TL NI F
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDE 239
Query: 368 QSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNF--ALIRSLTPPEI 425
+ S SE A+D I LL K+ RL + HP+ ++ A++R + +
Sbjct: 240 EFFSQTSEL-AKDFIRKLLVKETRKRLTIQEAL----RHPWITPVDTQQAMVRRESVVNL 294
Query: 426 PGMRRQ 431
++Q
Sbjct: 295 ENFKKQ 300
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 58/110 (52%), Gaps = 8/110 (7%)
Query: 135 RAEMEKK--ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTS 192
R E+E++ IL+ + HP + TL+ +E +++E SGG+L ++ + S
Sbjct: 59 REEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQK--ESLSEEE 116
Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDG----HIMLSDFDLS 238
A + ++L + YLH I + DLKPEN+++ HI L DF L+
Sbjct: 117 ATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 94/282 (33%), Gaps = 72/282 (25%)
Query: 70 TFGRKTG-LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXX 128
T +K G L DF+ +GAG+ G V+ S H+P L M
Sbjct: 22 TQKQKVGELKDDDFEKISELGAGNGGVVFKVS----------HKPSGL-VMARKLIHLEI 70
Query: 129 XXXXXHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRF 188
++ E ++L + P++ Y F + I ME GG L + K R
Sbjct: 71 KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA--GRI 128
Query: 189 SLTSARFYAAEVLVALEYL-HMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXX 247
+ V+ L YL I++RD+KP N+LV S G I L DF +S
Sbjct: 129 PEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS--------- 179
Query: 248 XXXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFV 307
+ N F G
Sbjct: 180 ---------------------GQLIDSMANSFVG-------------------------- 192
Query: 308 GTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAP 349
T Y+SPE G + D W+ G+ + EM GR P P
Sbjct: 193 -TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPP 233
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 106/286 (37%), Gaps = 83/286 (29%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E K+L+ L HP + L F + +V +F DL + K + + + Y
Sbjct: 62 EIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMET-DLEVII-KDNSLVLTPSHIKAYML 119
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
L LEYLH I++RDLKP N+L+ +G + L+DF L+
Sbjct: 120 MTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLA-------------------- 159
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
+ FGS PNR + + V T Y +PE+
Sbjct: 160 -------------------KSFGS-------PNRAYXHQVV---------TRWYRAPELL 184
Query: 319 SGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSP----SSM 373
G +G VD WA G + E++ R PF ++ + + L PT+ S+
Sbjct: 185 FGARMYGVGVDMWAVGCILAELLL-RVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSL 243
Query: 374 SEY--------------------HARDLISGLLNKDPCNRLGSKRG 399
+Y DLI GL +PC R+ + +
Sbjct: 244 PDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQA 289
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 95/265 (35%), Gaps = 68/265 (25%)
Query: 137 EMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFY 196
+ E +L D P++ Y + I+ME+ GG L P T
Sbjct: 68 QQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP---LDETQIATI 124
Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXX 256
E+L L+YLH I+RD+K NVL+ G + L+DF ++
Sbjct: 125 LREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVA------------------ 166
Query: 257 XXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE 316
+ T++ R N F G T +++PE
Sbjct: 167 --------GQLTDTQIKR--NXFVG---------------------------TPFWMAPE 189
Query: 317 VASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEY 376
V ++ + D W+ GI E+ G P + + +K P +P ++
Sbjct: 190 VIKQSAYDSKADIWSLGITAIELARGEPPHSE-------LHPMKVLFLIPKNNPPTLEGN 242
Query: 377 HARDL---ISGLLNKDPCNRLGSKR 398
+++ L + LNK+P R +K
Sbjct: 243 YSKPLKEFVEACLNKEPSFRPTAKE 267
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 89/270 (32%), Gaps = 71/270 (26%)
Query: 81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEK 140
DF+ +GAG+ G V+ S H+P L M ++ E
Sbjct: 7 DFEKISELGAGNGGVVFKVS----------HKPSGL-VMARKLIHLEIKPAIRNQIIREL 55
Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
++L + P++ Y F + I ME GG L + K R + V
Sbjct: 56 QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAV 113
Query: 201 LVALEYL-HMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXX 259
+ L YL I++RD+KP N+LV S G I L DF +S
Sbjct: 114 IKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS--------------------- 152
Query: 260 RSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS 319
+ N F G T Y+SPE
Sbjct: 153 ---------GQLIDSMANSFVG---------------------------TRSYMSPERLQ 176
Query: 320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAP 349
G + D W+ G+ + EM GR P P
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVGRYPIPPP 206
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 89/270 (32%), Gaps = 71/270 (26%)
Query: 81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEK 140
DF+ +GAG+ G V+ S H+P L M ++ E
Sbjct: 7 DFEKISELGAGNGGVVFKVS----------HKPSGL-VMARKLIHLEIKPAIRNQIIREL 55
Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
++L + P++ Y F + I ME GG L + K R + V
Sbjct: 56 QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAV 113
Query: 201 LVALEYL-HMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXX 259
+ L YL I++RD+KP N+LV S G I L DF +S
Sbjct: 114 IKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS--------------------- 152
Query: 260 RSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS 319
+ N F G T Y+SPE
Sbjct: 153 ---------GQLIDSMANSFVG---------------------------TRSYMSPERLQ 176
Query: 320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAP 349
G + D W+ G+ + EM GR P P
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVGRYPIPPP 206
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 50/103 (48%), Gaps = 5/103 (4%)
Query: 308 GTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPT 367
GT +V+PE+ + G D W+ G+ Y ++ G +PF + + TL N+ F
Sbjct: 179 GTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 368 QSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
+ S+ S A+D I LL KDP R+ + D HP+ K
Sbjct: 239 EYFSNTSAL-AKDFIRRLLVKDPKKRMTIQ----DSLQHPWIK 276
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 137 EMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFY 196
E E ILK + HP + TL+ +E +++E +GG+L ++ + + A +
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEF 119
Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLV 224
++L + YLH L I + DLKPEN+++
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIML 147
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 91/236 (38%), Gaps = 64/236 (27%)
Query: 166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVR 225
IVME GG+L S + + F+ A + A++YLH + I +RD+KPEN+L
Sbjct: 90 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL-- 147
Query: 226 SDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKI 285
YT + + + + FG K
Sbjct: 148 --------------------------------------YTSKRPNAILKLTD--FGFAK- 166
Query: 286 QTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTP 345
+T + N L EP T YV+PEV + + D W+ G+ +Y ++ G P
Sbjct: 167 ETTSHNSL--TEPCY--------TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 216
Query: 346 F-------AAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRL 394
F +P +T +R FP S +SE + LI LL +P R+
Sbjct: 217 FYSNHGLAISPGMKTRIR---MGQYEFPNPEWSEVSE-EVKMLIRNLLKTEPTQRM 268
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 95/265 (35%), Gaps = 68/265 (25%)
Query: 137 EMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFY 196
+ E +L D P++ Y + I+ME+ GG L P T
Sbjct: 53 QQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP---LDETQIATI 109
Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXX 256
E+L L+YLH I+RD+K NVL+ G + L+DF ++
Sbjct: 110 LREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVA------------------ 151
Query: 257 XXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE 316
+ T++ R N F G T +++PE
Sbjct: 152 --------GQLTDTQIKR--NXFVG---------------------------TPFWMAPE 174
Query: 317 VASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEY 376
V ++ + D W+ GI E+ G P + + +K P +P ++
Sbjct: 175 VIKQSAYDSKADIWSLGITAIELARGEPPHSE-------LHPMKVLFLIPKNNPPTLEGN 227
Query: 377 HARDL---ISGLLNKDPCNRLGSKR 398
+++ L + LNK+P R +K
Sbjct: 228 YSKPLKEFVEACLNKEPSFRPTAKE 252
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 95/265 (35%), Gaps = 68/265 (25%)
Query: 137 EMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFY 196
+ E +L D P++ Y + I+ME+ GG L P T
Sbjct: 53 QQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP---LDETQIATI 109
Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXX 256
E+L L+YLH I+RD+K NVL+ G + L+DF ++
Sbjct: 110 LREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVA------------------ 151
Query: 257 XXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE 316
+ T++ R N F G T +++PE
Sbjct: 152 --------GQLTDTQIKR--NTFVG---------------------------TPFWMAPE 174
Query: 317 VASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEY 376
V ++ + D W+ GI E+ G P + + +K P +P ++
Sbjct: 175 VIKQSAYDSKADIWSLGITAIELARGEPPHSE-------LHPMKVLFLIPKNNPPTLEGN 227
Query: 377 HARDL---ISGLLNKDPCNRLGSKR 398
+++ L + LNK+P R +K
Sbjct: 228 YSKPLKEFVEACLNKEPSFRPTAKE 252
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E ++ DHP + L N I+ME C+ G+L S + + L S YA
Sbjct: 89 EALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYS-LDLASLILYAY 146
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
++ AL YL ++RD+ NVLV S+ + L DF LS
Sbjct: 147 QLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 186
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 89/270 (32%), Gaps = 71/270 (26%)
Query: 81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEK 140
DF+ +GAG+ G V+ S H+P L M ++ E
Sbjct: 7 DFEKISELGAGNGGVVFKVS----------HKPSGL-VMARKLIHLEIKPAIRNQIIREL 55
Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
++L + P++ Y F + I ME GG L + K R + V
Sbjct: 56 QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAV 113
Query: 201 LVALEYL-HMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXX 259
+ L YL I++RD+KP N+LV S G I L DF +S
Sbjct: 114 IKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS--------------------- 152
Query: 260 RSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS 319
+ N F G T Y+SPE
Sbjct: 153 ---------GQLIDSMANSFVG---------------------------TRSYMSPERLQ 176
Query: 320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAP 349
G + D W+ G+ + EM GR P P
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVGRYPIPPP 206
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 89/270 (32%), Gaps = 71/270 (26%)
Query: 81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEK 140
DF+ +GAG+ G V+ S H+P L M ++ E
Sbjct: 7 DFEKISELGAGNGGVVFKVS----------HKPSGL-VMARKLIHLEIKPAIRNQIIREL 55
Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
++L + P++ Y F + I ME GG L + K R + V
Sbjct: 56 QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAV 113
Query: 201 LVALEYL-HMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXX 259
+ L YL I++RD+KP N+LV S G I L DF +S
Sbjct: 114 IKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS--------------------- 152
Query: 260 RSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS 319
+ N F G T Y+SPE
Sbjct: 153 ---------GQLIDSMANSFVG---------------------------TRSYMSPERLQ 176
Query: 320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAP 349
G + D W+ G+ + EM GR P P
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVGRYPIPPP 206
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E ++ DHP + L N I+ME C+ G+L S + + L S YA
Sbjct: 66 EALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYS-LDLASLILYAY 123
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
++ AL YL ++RD+ NVLV S+ + L DF LS
Sbjct: 124 QLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 163
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E ++ DHP + L N I+ME C+ G+L S + + L S YA
Sbjct: 63 EALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYS-LDLASLILYAY 120
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
++ AL YL ++RD+ NVLV S+ + L DF LS
Sbjct: 121 QLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 160
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 61/116 (52%), Gaps = 19/116 (16%)
Query: 139 EKKILKMLDHPFL--------PTL-YAEFEASNFSCIVMEFCSGGDLHSLRHK-QPHKRF 188
E KILK H + PT+ Y EF++ +ME DLH + H QP
Sbjct: 104 ELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLME----SDLHQIIHSSQP---L 156
Query: 189 SLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS--LCSN 242
+L R++ ++L L+Y+H +I+RDLKP N+LV + + + DF ++ LC++
Sbjct: 157 TLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTS 212
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 95/265 (35%), Gaps = 68/265 (25%)
Query: 137 EMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFY 196
+ E +L D P++ Y + I+ME+ GG L P T
Sbjct: 73 QQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP---LDETQIATI 129
Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXX 256
E+L L+YLH I+RD+K NVL+ G + L+DF ++
Sbjct: 130 LREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVA------------------ 171
Query: 257 XXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE 316
+ T++ R N F G T +++PE
Sbjct: 172 --------GQLTDTQIKR--NTFVG---------------------------TPFWMAPE 194
Query: 317 VASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEY 376
V ++ + D W+ GI E+ G P + + +K P +P ++
Sbjct: 195 VIKQSAYDSKADIWSLGITAIELARGEPPHSE-------LHPMKVLFLIPKNNPPTLEGN 247
Query: 377 HARDL---ISGLLNKDPCNRLGSKR 398
+++ L + LNK+P R +K
Sbjct: 248 YSKPLKEFVEACLNKEPSFRPTAKE 272
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 84/197 (42%), Gaps = 37/197 (18%)
Query: 194 RFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXX 253
++ +++ ++YLH G+++RD+KP N+L+ ++ H+ ++DF LS
Sbjct: 112 QYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLS--------------- 156
Query: 254 XXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYV 313
RS R+ + + +N +P+ +V T Y
Sbjct: 157 ------RSFVNIRRVTNNIPLSINE----------NTENFDDDQPILT---DYVATRWYR 197
Query: 314 SPEVASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPT-QSPS 371
+PE+ G + + +D W+ G + E++ G+ F S L I+ + FP+ +
Sbjct: 198 APEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERII-GVIDFPSNEDVE 256
Query: 372 SMSEYHARDLISGLLNK 388
S+ A+ +I L K
Sbjct: 257 SIQSPFAKTMIESLKEK 273
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E ++ DHP + L N I+ME C+ G+L S + + L S YA
Sbjct: 64 EALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYS-LDLASLILYAY 121
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
++ AL YL ++RD+ NVLV S+ + L DF LS
Sbjct: 122 QLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 161
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 56/109 (51%), Gaps = 5/109 (4%)
Query: 134 HRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSA 193
+ E E +I ++L H + L+ F +V + +GG+L + +S A
Sbjct: 48 QKLEREARICRLLKHSNIVRLHDSISEEGFHYLVFDLVTGGEL--FEDIVAREYYSEADA 105
Query: 194 RFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSD---GHIMLSDFDLSL 239
++L A+ + H +G+++RDLKPEN+L+ S + L+DF L++
Sbjct: 106 SHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAI 154
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 5/104 (4%)
Query: 305 SFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT 364
F GT Y+SPEV ++G VD WA G+ +Y ++ G PF + I
Sbjct: 165 GFAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYD 224
Query: 365 FPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPF 408
FP+ +++ A++LI+ +L +P R+ A + HP+
Sbjct: 225 FPSPEWDTVTP-EAKNLINQMLTINPAKRI----TAHEALKHPW 263
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 308 GTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPT 367
GT E+V+PE+ + G D W+ G+ Y ++ G +PF + + TL NI F
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDE 239
Query: 368 QSPSSMSEYHARDLISGLLNKDPCNRL 394
+ S SE A+D I LL K+ RL
Sbjct: 240 EFFSHTSEL-AKDFIRKLLVKETRKRL 265
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 57/110 (51%), Gaps = 8/110 (7%)
Query: 135 RAEMEKK--ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTS 192
R E+E++ IL+ + H + TL+ +E +++E SGG+L ++ + S
Sbjct: 59 REEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK--ESLSEEE 116
Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDG----HIMLSDFDLS 238
A + ++L + YLH I + DLKPEN+++ HI L DF L+
Sbjct: 117 ATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 61/116 (52%), Gaps = 19/116 (16%)
Query: 139 EKKILKMLDHPFL--------PTL-YAEFEASNFSCIVMEFCSGGDLHSLRHK-QPHKRF 188
E KILK H + PT+ Y EF++ +ME DLH + H QP
Sbjct: 103 ELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLME----SDLHQIIHSSQP---L 155
Query: 189 SLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS--LCSN 242
+L R++ ++L L+Y+H +I+RDLKP N+LV + + + DF ++ LC++
Sbjct: 156 TLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTS 211
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E ++ DHP + L N I+ME C+ G+L S + + L S YA
Sbjct: 61 EALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYS-LDLASLILYAY 118
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
++ AL YL ++RD+ NVLV S+ + L DF LS
Sbjct: 119 QLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 158
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E ++ DHP + L N I+ME C+ G+L S + + L S YA
Sbjct: 61 EALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYS-LDLASLILYAY 118
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
++ AL YL ++RD+ NVLV S+ + L DF LS
Sbjct: 119 QLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 158
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 57/110 (51%), Gaps = 11/110 (10%)
Query: 135 RAEMEKKILKMLDHPFLPTLYAEF------EASNFSCIVMEFCSGGDLHSLRHKQPHKRF 188
RA E ++K+++H + L F E IVME ++ + H+R
Sbjct: 69 RAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERM 128
Query: 189 SLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
S + ++LV +++LH GII+RDLKP N++V+SD + + DF L+
Sbjct: 129 S-----YLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLA 173
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 85/223 (38%), Gaps = 64/223 (28%)
Query: 139 EKKILKMLDHPFLPTLYAEF-EASNFSC-IVMEFCSGGDLHSLRHKQPHKRFSLTSARF- 195
E +L+ L HP + Y + +N + IVME+C GGDL S+ K +R L
Sbjct: 55 EVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVL 114
Query: 196 -YAAEVLVALEYLHMLG-----IIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXX 249
++ +AL+ H +++RDLKP NV + ++ L DF L
Sbjct: 115 RVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGL------------ 162
Query: 250 XXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGT 309
+R LN + F E FVGT
Sbjct: 163 -----------------------ARILNH------------DEDFAKE--------FVGT 179
Query: 310 HEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNE 352
Y+SPE + S+ D W+ G +YE+ PF A S +
Sbjct: 180 PYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK 222
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/276 (20%), Positives = 98/276 (35%), Gaps = 65/276 (23%)
Query: 86 RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKKILKM 145
+RIG+G GTVY K+ D + + A R IL
Sbjct: 18 QRIGSGSFGTVY----KGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 73
Query: 146 LDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALE 205
+ + P L IV ++C G L+ H K F + A + ++
Sbjct: 74 MGYSTKPQL----------AIVTQWCEGSSLYHHLHASETK-FEMKKLIDIARQTARGMD 122
Query: 206 YLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYT 265
YLH II+RDLK N+ + D + + DF L+
Sbjct: 123 YLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVK------------------------ 158
Query: 266 RQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGN 325
+R+ GS + + L+ + L++A V + +
Sbjct: 159 -----------SRWSGSHQFEQLSGSILWMAPEVI---------------RMQDSNPYSF 192
Query: 326 AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKK 361
D +AFGI +YE++ G+ P++ +N + +V +
Sbjct: 193 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGR 228
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E ++ DHP + L N I+ME C+ G+L S + + L S YA
Sbjct: 58 EALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYS-LDLASLILYAY 115
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
++ AL YL ++RD+ NVLV S+ + L DF LS
Sbjct: 116 QLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 155
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 57/110 (51%), Gaps = 11/110 (10%)
Query: 135 RAEMEKKILKMLDHPFLPTLYAEF------EASNFSCIVMEFCSGGDLHSLRHKQPHKRF 188
RA E ++K+++H + L F E IVME ++ + H+R
Sbjct: 69 RAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERM 128
Query: 189 SLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
S + ++LV +++LH GII+RDLKP N++V+SD + + DF L+
Sbjct: 129 S-----YLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLA 173
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 57/110 (51%), Gaps = 11/110 (10%)
Query: 135 RAEMEKKILKMLDHPFLPTLYAEF------EASNFSCIVMEFCSGGDLHSLRHKQPHKRF 188
RA E ++K+++H + L F E IVME ++ + H+R
Sbjct: 69 RAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERM 128
Query: 189 SLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
S + ++LV +++LH GII+RDLKP N++V+SD + + DF L+
Sbjct: 129 S-----YLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLA 173
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 56/109 (51%), Gaps = 5/109 (4%)
Query: 134 HRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSA 193
+ E E +I ++L HP + L+ F +V + +GG+L + +S A
Sbjct: 75 QKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGEL--FEDIVAREYYSEADA 132
Query: 194 RFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSD---GHIMLSDFDLSL 239
++L ++ ++H I++RDLKPEN+L+ S + L+DF L++
Sbjct: 133 SHCIHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAI 181
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
Query: 305 SFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT 364
F GT Y+SPEV +G VD WA G+ +Y ++ G PF + I
Sbjct: 192 GFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYD 251
Query: 365 FPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRG 399
FP+ +++ A++LI+ +L +P R+ + +
Sbjct: 252 FPSPEWDTVTP-EAKNLINQMLTINPAKRITADQA 285
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 53/104 (50%), Gaps = 8/104 (7%)
Query: 309 THEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNET---TLRNIVKKPLTF 365
T +V+PEV + A D W+ G+ +Y M+ G TPFA ++T L I +
Sbjct: 183 TANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSL 242
Query: 366 PTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFF 409
+S+S+ A+DL+S +L+ DP RL AA V HP+
Sbjct: 243 SGGYWNSVSDT-AKDLVSKMLHVDPHQRL----TAALVLRHPWI 281
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
+L+ HP + TL ++ + +V E GG+L +Q K FS A +
Sbjct: 69 LLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQ--KFFSEREASAVLFTIT 126
Query: 202 VALEYLHMLGIIYRDLKPENVL 223
+EYLH G+++RDLKP N+L
Sbjct: 127 KTVEYLHAQGVVHRDLKPSNIL 148
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 50/102 (49%), Gaps = 6/102 (5%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSL--TSARFY 196
E ++ DHP + L N I+ME C+ G+L S ++FSL S Y
Sbjct: 61 EALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQV---RKFSLDLASLILY 116
Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
A ++ AL YL ++RD+ NVLV S+ + L DF LS
Sbjct: 117 AYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 158
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 50/102 (49%), Gaps = 6/102 (5%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARF--Y 196
E ++ DHP + L N I+ME C+ G+L S ++FSL A Y
Sbjct: 441 EALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQV---RKFSLDLASLILY 496
Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
A ++ AL YL ++RD+ NVLV S+ + L DF LS
Sbjct: 497 AYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 538
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/276 (20%), Positives = 98/276 (35%), Gaps = 65/276 (23%)
Query: 86 RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKKILKM 145
+RIG+G GTVY K+ D + + A R IL
Sbjct: 30 QRIGSGSFGTVY----KGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 85
Query: 146 LDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALE 205
+ + P L IV ++C G L+ H K F + A + ++
Sbjct: 86 MGYSTAPQL----------AIVTQWCEGSSLYHHLHASETK-FEMKKLIDIARQTARGMD 134
Query: 206 YLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYT 265
YLH II+RDLK N+ + D + + DF L+
Sbjct: 135 YLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEK------------------------ 170
Query: 266 RQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGN 325
+R+ GS + + L+ + L++A V + +
Sbjct: 171 -----------SRWSGSHQFEQLSGSILWMAPEVI---------------RMQDSNPYSF 204
Query: 326 AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKK 361
D +AFGI +YE++ G+ P++ +N + +V +
Sbjct: 205 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGR 240
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/276 (20%), Positives = 98/276 (35%), Gaps = 65/276 (23%)
Query: 86 RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKKILKM 145
+RIG+G GTVY K+ D + + A R IL
Sbjct: 30 QRIGSGSFGTVY----KGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 85
Query: 146 LDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALE 205
+ + P L IV ++C G L+ H K F + A + ++
Sbjct: 86 MGYSTKPQL----------AIVTQWCEGSSLYHHLHASETK-FEMKKLIDIARQTARGMD 134
Query: 206 YLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYT 265
YLH II+RDLK N+ + D + + DF L+
Sbjct: 135 YLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEK------------------------ 170
Query: 266 RQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGN 325
+R+ GS + + L+ + L++A V + +
Sbjct: 171 -----------SRWSGSHQFEQLSGSILWMAPEVI---------------RMQDSNPYSF 204
Query: 326 AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKK 361
D +AFGI +YE++ G+ P++ +N + +V +
Sbjct: 205 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGR 240
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 92/258 (35%), Gaps = 58/258 (22%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E K+ ML HP + L C+VMEF GG L+ + KR +A
Sbjct: 56 EAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSG---KRIPPDILVNWAV 112
Query: 199 EVLVALEYLH---MLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXX 255
++ + YLH ++ II+RDLK S ++L + SN I
Sbjct: 113 QIARGMNYLHDEAIVPIIHRDLK-------SSNILILQKVENGDLSNKI----------- 154
Query: 256 XXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP 315
+ L+R +R S G + +++P
Sbjct: 155 ---------LKITDFGLAREWHR----------------------TTKMSAAGAYAWMAP 183
Query: 316 EVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSE 375
EV D W++G+ ++E++ G PF + L P PS+ E
Sbjct: 184 EVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPI--PSTCPE 241
Query: 376 YHARDLISGLLNKDPCNR 393
A+ L+ N DP +R
Sbjct: 242 PFAK-LMEDCWNPDPHSR 258
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 101/273 (36%), Gaps = 80/273 (29%)
Query: 154 LYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGII 213
LY + +VME C DL+S K+ K + Y +L A+ +H GI+
Sbjct: 93 LYDYEITDQYIYMVME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQHGIV 149
Query: 214 YRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYTRQYSTRLS 273
+ DLKP N L+ DG + L DF ++
Sbjct: 150 HSDLKPANFLI-VDGMLKLIDFGIA----------------------------------- 173
Query: 274 RFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE----VASGGSHGNAV-- 327
+ P+ V + S VGT Y+ PE ++S +G +
Sbjct: 174 ------------NQMQPDXXXVVKD------SQVGTVNYMPPEAIKDMSSSRENGKSKSK 215
Query: 328 -----DWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKP---LTFPTQSPSSMSEYHAR 379
D W+ G +Y M YG+TPF N+ + + + P + FP + E +
Sbjct: 216 ISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP-----DIPEKDLQ 270
Query: 380 DLISGLLNKDPCNRLGSKRGAA----DVKTHPF 408
D++ L +DP R+ A ++THP
Sbjct: 271 DVLKCCLKRDPKQRISIPELLAHPYVQIQTHPV 303
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 107/299 (35%), Gaps = 104/299 (34%)
Query: 166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVR 225
IVME ++ + H+R S + ++L +++LH GII+RDLKP N++V+
Sbjct: 106 IVMELMDANLCQVIQMELDHERMS-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK 160
Query: 226 SDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKI 285
SD + + DF L+ R G+
Sbjct: 161 SDCTLKILDFGLA---------------------------------------RTAGTS-- 179
Query: 286 QTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIY---- 341
F+ EP V T Y +PEV G + VD W+ G + EM+
Sbjct: 180 --------FMMEPE-------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHKIL 224
Query: 342 --GR--------------TPFAA--PSNETTLRNIVKK--------------PLTFPTQS 369
GR TP A + T+RN V+ + FP S
Sbjct: 225 FPGRDYIDQWNKVIEQLGTPCPAFMKKLQPTVRNYVENRPKYAGYSFEKLFPDVLFPADS 284
Query: 370 P-SSMSEYHARDLISGLLNKDPCNRLGSKRGAAD-VKTHPFFKGLNFALIRSLTPPEIP 426
+ + ARDL+S +L D SKR + D HP+ PP+IP
Sbjct: 285 EHNKLKASQARDLLSKMLVID-----ASKRISVDEALQHPYINVWYDPSEAEAPPPKIP 338
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 111/305 (36%), Gaps = 94/305 (30%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPH----KRFSLTSAR 194
E ++K L H + LY N +V EF DL + + L +
Sbjct: 53 EISLMKELKHENIVRLYDVIHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVK 111
Query: 195 FYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXX 254
++ ++L L + H I++RDLKP+N+L+ G + L DF L+
Sbjct: 112 YFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLA---------------- 155
Query: 255 XXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVS 314
R FG P F +E V T Y +
Sbjct: 156 -----------------------RAFG-------IPVNTFSSEVV---------TLWYRA 176
Query: 315 PEVASGG-SHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLR---NIVKKP-------- 362
P+V G ++ ++D W+ G + EMI G+ F ++E L+ +I+ P
Sbjct: 177 PDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSV 236
Query: 363 LTFPTQSPS----------SMSEYHAR--------DLISGLLNKDPCNRLGSKRGAADVK 404
P +P+ + + H + D + GLL +P RL +K+
Sbjct: 237 TKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH--- 293
Query: 405 THPFF 409
HP+F
Sbjct: 294 -HPWF 297
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 72/169 (42%), Gaps = 14/169 (8%)
Query: 72 GRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXX 131
G + G+ D L+R +G G G VY Y +G + +
Sbjct: 4 GPQYGIAREDVVLNRILGEGFFGEVY----EGVYTNHKGEK----INVAVKTCKKDCTLD 55
Query: 132 XXHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDL-HSL-RHKQPHKRFS 189
+ E I+K LDHP + L E + I+ME G+L H L R+K K +
Sbjct: 56 NKEKFMSEAVIMKNLDHPHIVKLIGIIEEEP-TWIIMELYPYGELGHYLERNKNSLKVLT 114
Query: 190 LTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
L Y+ ++ A+ YL + ++RD+ N+LV S + L DF LS
Sbjct: 115 LV---LYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLS 160
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 46/99 (46%), Gaps = 9/99 (9%)
Query: 146 LDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQ---PHKRFSLTSARFYAAEVLV 202
L P + LY + I ME GG L L + P R A +Y + L
Sbjct: 121 LSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDR-----ALYYLGQALE 175
Query: 203 ALEYLHMLGIIYRDLKPENVLVRSDG-HIMLSDFDLSLC 240
LEYLH I++ D+K +NVL+ SDG L DF +LC
Sbjct: 176 GLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALC 214
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 106/276 (38%), Gaps = 65/276 (23%)
Query: 139 EKKILKMLDHPFLPTLYAEF-EASNFS------------CIVMEFCSGGDLHSLRHKQPH 185
E +L L+H ++ YA + E NF I E+C L+ L H +
Sbjct: 52 EVXLLASLNHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENL 111
Query: 186 KRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIX 245
+ R + ++L AL Y+H GII+R+LKP N+ + ++ + DF L+
Sbjct: 112 NQQRDEYWRLFR-QILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLA------- 163
Query: 246 XXXXXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCS 305
RS + S L GS LT A +
Sbjct: 164 ----------KNVHRSLDILKLDSQNLP-------GSS--DNLTS---------AIGTAX 195
Query: 306 FVGTHEYVSPEVASGGSHGN-AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT 364
+V T EV G H N +D ++ GI +E IY PF+ NI+KK +
Sbjct: 196 YVAT------EVLDGTGHYNEKIDXYSLGIIFFEXIY---PFSTGXERV---NILKKLRS 243
Query: 365 FPTQSPSSMSEYHA---RDLISGLLNKDPCNRLGSK 397
+ P + + +I L++ DP R G++
Sbjct: 244 VSIEFPPDFDDNKXKVEKKIIRLLIDHDPNKRPGAR 279
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 46/99 (46%), Gaps = 9/99 (9%)
Query: 146 LDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQ---PHKRFSLTSARFYAAEVLV 202
L P + LY + I ME GG L L + P R A +Y + L
Sbjct: 107 LSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDR-----ALYYLGQALE 161
Query: 203 ALEYLHMLGIIYRDLKPENVLVRSDG-HIMLSDFDLSLC 240
LEYLH I++ D+K +NVL+ SDG L DF +LC
Sbjct: 162 GLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALC 200
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 46/99 (46%), Gaps = 9/99 (9%)
Query: 146 LDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQ---PHKRFSLTSARFYAAEVLV 202
L P + LY + I ME GG L L + P R A +Y + L
Sbjct: 123 LSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDR-----ALYYLGQALE 177
Query: 203 ALEYLHMLGIIYRDLKPENVLVRSDG-HIMLSDFDLSLC 240
LEYLH I++ D+K +NVL+ SDG L DF +LC
Sbjct: 178 GLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALC 216
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 107/313 (34%), Gaps = 80/313 (25%)
Query: 86 RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKKILKM 145
R IG G G VY R R E + M + E + L+
Sbjct: 60 REIGHGSFGAVYFA------RDVRNSEVVAIKKMSYSGKQSNEKWQDIIK---EVRFLQK 110
Query: 146 LDHPFLPTLYAEFEASNFSCIVMEFC--SGGDLHSLRHKQPHKRFSLTSARFYAAEVLVA 203
L HP + + + +VME+C S DL + HK+P + + + A L
Sbjct: 111 LRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEV-HKKPLQEVEIAAVTHGA---LQG 166
Query: 204 LEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQT 263
L YLH +I+RD+K N+L+ G + L D
Sbjct: 167 LAYLHSHNMIHRDVKAGNILLSEPGLVKLGD----------------------------- 197
Query: 264 YTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV---ASG 320
FGS I + P FV GT +++PEV
Sbjct: 198 ----------------FGSASI--MAPANXFV------------GTPYWMAPEVILAMDE 227
Query: 321 GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARD 380
G + VD W+ GI E+ + P + + L +I + P SEY R+
Sbjct: 228 GQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN--ESPALQSGHWSEYF-RN 284
Query: 381 LISGLLNKDPCNR 393
+ L K P +R
Sbjct: 285 FVDSCLQKIPQDR 297
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 56/110 (50%), Gaps = 11/110 (10%)
Query: 135 RAEMEKKILKMLDHPFLPTLYAEF------EASNFSCIVMEFCSGGDLHSLRHKQPHKRF 188
RA E ++K+++H + L F E IVME ++ + H+R
Sbjct: 69 RAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERM 128
Query: 189 SLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
S + ++L +++LH GII+RDLKP N++V+SD + + DF L+
Sbjct: 129 S-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLA 173
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 93/285 (32%), Gaps = 72/285 (25%)
Query: 81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEK 140
DF+ +GAG+ G V H P L M ++ E
Sbjct: 17 DFERISELGAGNGGVVTKVQ----------HRPSGLI-MARKLIHLEIKPAIRNQIIREL 65
Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
++L + P++ Y F + I ME GG L + + KR + V
Sbjct: 66 QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEA--KRIPEEILGKVSIAV 123
Query: 201 LVALEYL-HMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXX 259
L L YL I++RD+KP N+LV S G I L DF +S
Sbjct: 124 LRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVS--------------------- 162
Query: 260 RSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS 319
+ N F G T Y++PE
Sbjct: 163 ---------GQLIDSMANSFVG---------------------------TRSYMAPERLQ 186
Query: 320 GGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT 364
G + D W+ G+ + E+ GR P P + L I +P+
Sbjct: 187 GTHYSVQSDIWSMGLSLVELAVGRYPIPPP-DAKELEAIFGRPVV 230
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 83/215 (38%), Gaps = 55/215 (25%)
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
++ A+E+LH G+++RDLKP N+ D + + DF L +
Sbjct: 172 QIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQ--------------- 216
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
++ LTP P A VGT Y+SPE
Sbjct: 217 ----------------------DEEEQTVLTPM------PAYATHXGQVGTKLYMSPEQI 248
Query: 319 SGGSHGNAVDWWAFGIFIYEMIYG-RTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYH 377
G ++ + VD ++ G+ ++E++Y T T +RN+ K PL F + P
Sbjct: 249 HGNNYSHKVDIFSLGLILFELLYSFSTQMERVRIITDVRNL-KFPLLFTQKYPQEHM--- 304
Query: 378 ARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGL 412
++ +L+ P R A D+ + F+ L
Sbjct: 305 ---MVQDMLSPSPTER----PEATDIIENAIFENL 332
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 117/296 (39%), Gaps = 64/296 (21%)
Query: 135 RAEMEKKILKMLDHPFLPTLYAEF------EASNFSCIVMEFCSGGDLHSLRHKQPHKRF 188
RA E ++K ++H + +L F E +VME ++ + H+R
Sbjct: 69 RAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERM 128
Query: 189 SLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXX 248
S + ++L +++LH GII+RDLKP N++V+SD + + DF L+ +
Sbjct: 129 S-----YLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT----- 178
Query: 249 XXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVG 308
S T TR R G + E V S +
Sbjct: 179 ------------SFMMTPYVVTRYYRAPEVILG-----------MGYKENVDIWSVGCI- 214
Query: 309 THEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK-KP----L 363
E V ++ G + +D W I E + P + T+RN V+ +P L
Sbjct: 215 MGEMVRHKILFPGR--DYIDQWNKVI---EQLGTPCPEFMKKLQPTVRNYVENRPKYAGL 269
Query: 364 TFPTQSPSSM----SEYH------ARDLISGLLNKDPCNRLGSKRGAADVKTHPFF 409
TFP P S+ SE++ ARDL+S +L DP R+ D HP+
Sbjct: 270 TFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI----SVDDALQHPYI 321
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 9/90 (10%)
Query: 140 KKILKMLDHPFLPTLYAEFEASN-----FSCIVMEFCSGGDLHSLRHKQPHKRFSLTSAR 194
++ L + HP + ++ E ++ IVME+ G SL+ + K + A
Sbjct: 130 RQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGG---QSLKRSKGQK-LPVAEAI 185
Query: 195 FYAAEVLVALEYLHMLGIIYRDLKPENVLV 224
Y E+L AL YLH +G++Y DLKPEN+++
Sbjct: 186 AYLLEILPALSYLHSIGLVYNDLKPENIML 215
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 107/313 (34%), Gaps = 80/313 (25%)
Query: 86 RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKKILKM 145
R IG G G VY R R E + M + E + L+
Sbjct: 21 REIGHGSFGAVYFA------RDVRNSEVVAIKKMSYSGKQSNEKWQDIIK---EVRFLQK 71
Query: 146 LDHPFLPTLYAEFEASNFSCIVMEFC--SGGDLHSLRHKQPHKRFSLTSARFYAAEVLVA 203
L HP + + + +VME+C S DL + HK+P + + + A L
Sbjct: 72 LRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEV-HKKPLQEVEIAAVTHGA---LQG 127
Query: 204 LEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQT 263
L YLH +I+RD+K N+L+ G + L D
Sbjct: 128 LAYLHSHNMIHRDVKAGNILLSEPGLVKLGD----------------------------- 158
Query: 264 YTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEV---ASG 320
FGS I + P FV GT +++PEV
Sbjct: 159 ----------------FGSASI--MAPANXFV------------GTPYWMAPEVILAMDE 188
Query: 321 GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARD 380
G + VD W+ GI E+ + P + + L +I + P SEY R+
Sbjct: 189 GQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN--ESPALQSGHWSEYF-RN 245
Query: 381 LISGLLNKDPCNR 393
+ L K P +R
Sbjct: 246 FVDSCLQKIPQDR 258
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 64/151 (42%), Gaps = 18/151 (11%)
Query: 82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
+++ R+G G G V QD G + + R +E +
Sbjct: 17 WEMKERLGTGGFGYVL-----RWIHQDTGEQ------VAIKQCRQELSPKNRERWCLEIQ 65
Query: 142 ILKMLDHPFL------PTLYAEFEASNFSCIVMEFCSGGDLHS-LRHKQPHKRFSLTSAR 194
I+K L+HP + P + ++ + ME+C GGDL L + R
Sbjct: 66 IMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIR 125
Query: 195 FYAAEVLVALEYLHMLGIIYRDLKPENVLVR 225
+++ AL YLH II+RDLKPEN++++
Sbjct: 126 TLLSDISSALRYLHENRIIHRDLKPENIVLQ 156
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 305 SFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPF 346
FVGT +Y++PE+ + VD+W+FG +E I G PF
Sbjct: 183 EFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF 224
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 64/151 (42%), Gaps = 18/151 (11%)
Query: 82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
+++ R+G G G V QD G + + R +E +
Sbjct: 16 WEMKERLGTGGFGYVL-----RWIHQDTGEQ------VAIKQCRQELSPKNRERWCLEIQ 64
Query: 142 ILKMLDHPFL------PTLYAEFEASNFSCIVMEFCSGGDLHS-LRHKQPHKRFSLTSAR 194
I+K L+HP + P + ++ + ME+C GGDL L + R
Sbjct: 65 IMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIR 124
Query: 195 FYAAEVLVALEYLHMLGIIYRDLKPENVLVR 225
+++ AL YLH II+RDLKPEN++++
Sbjct: 125 TLLSDISSALRYLHENRIIHRDLKPENIVLQ 155
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 305 SFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPF 346
FVGT +Y++PE+ + VD+W+FG +E I G PF
Sbjct: 182 EFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF 223
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 117/296 (39%), Gaps = 64/296 (21%)
Query: 135 RAEMEKKILKMLDHPFLPTLYAEF------EASNFSCIVMEFCSGGDLHSLRHKQPHKRF 188
RA E ++K ++H + +L F E +VME ++ + H+R
Sbjct: 69 RAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERM 128
Query: 189 SLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXX 248
S + ++L +++LH GII+RDLKP N++V+SD + + DF L+ +
Sbjct: 129 S-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT----- 178
Query: 249 XXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVG 308
S T TR R G + E V S +
Sbjct: 179 ------------SFMMTPYVVTRYYRAPEVILG-----------MGYKENVDIWSVGCI- 214
Query: 309 THEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK-KP----L 363
E V ++ G + +D W I E + P + T+RN V+ +P L
Sbjct: 215 MGEMVRHKILFPGR--DYIDQWNKVI---EQLGTPCPEFMKKLQPTVRNYVENRPKYAGL 269
Query: 364 TFPTQSPSSM----SEYH------ARDLISGLLNKDPCNRLGSKRGAADVKTHPFF 409
TFP P S+ SE++ ARDL+S +L DP R+ D HP+
Sbjct: 270 TFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI----SVDDALQHPYI 321
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 117/296 (39%), Gaps = 64/296 (21%)
Query: 135 RAEMEKKILKMLDHPFLPTLYAEF------EASNFSCIVMEFCSGGDLHSLRHKQPHKRF 188
RA E ++K ++H + +L F E +VME ++ + H+R
Sbjct: 69 RAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERM 128
Query: 189 SLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXX 248
S + ++L +++LH GII+RDLKP N++V+SD + + DF L+ +
Sbjct: 129 S-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT----- 178
Query: 249 XXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVG 308
S T TR R G + E V S +
Sbjct: 179 ------------SFMMTPYVVTRYYRAPEVILG-----------MGYKENVDIWSVGCI- 214
Query: 309 THEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK-KP----L 363
E V ++ G + +D W I E + P + T+RN V+ +P L
Sbjct: 215 MGEMVRHKILFPGR--DYIDQWNKVI---EQLGTPCPEFMKKLQPTVRNYVENRPKYAGL 269
Query: 364 TFPTQSPSSM----SEYH------ARDLISGLLNKDPCNRLGSKRGAADVKTHPFF 409
TFP P S+ SE++ ARDL+S +L DP R+ D HP+
Sbjct: 270 TFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI----SVDDALQHPYI 321
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 49/102 (48%), Gaps = 6/102 (5%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSL--TSARFY 196
E ++ DHP + L N I+ME C+ G+L S ++FSL S Y
Sbjct: 61 EALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQV---RKFSLDLASLILY 116
Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
A ++ AL YL ++RD+ NVLV + + L DF LS
Sbjct: 117 AYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLS 158
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 117/296 (39%), Gaps = 64/296 (21%)
Query: 135 RAEMEKKILKMLDHPFLPTLYAEF------EASNFSCIVMEFCSGGDLHSLRHKQPHKRF 188
RA E ++K ++H + +L F E +VME ++ + H+R
Sbjct: 69 RAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERM 128
Query: 189 SLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXX 248
S + ++L +++LH GII+RDLKP N++V+SD + + DF L+ +
Sbjct: 129 S-----YLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT----- 178
Query: 249 XXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVG 308
S T TR R G + E V S +
Sbjct: 179 ------------SFMMTPYVVTRYYRAPEVILG-----------MGYKENVDIWSVGCI- 214
Query: 309 THEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK-KP----L 363
E V ++ G + +D W I E + P + T+RN V+ +P L
Sbjct: 215 MGEMVRHKILFPGR--DYIDQWNKVI---EQLGTPCPEFMKKLQPTVRNYVENRPKYAGL 269
Query: 364 TFPTQSPSSM----SEYH------ARDLISGLLNKDPCNRLGSKRGAADVKTHPFF 409
TFP P S+ SE++ ARDL+S +L DP R+ D HP+
Sbjct: 270 TFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI----SVDDALQHPYI 321
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 104/302 (34%), Gaps = 90/302 (29%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E ++LK L HP L L F +V E+C LH L Q L + +
Sbjct: 52 EIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITW-- 109
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
+ L A+ + H I+RD+KPEN+L+ I L DF +
Sbjct: 110 QTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFA-------------------- 149
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
+ LT + + VA R Y SPE+
Sbjct: 150 ---------------------------RLLTGPSDYYDDEVATRW--------YRSPELL 174
Query: 319 SGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPL---------TFPTQ 368
G + +G VD WA G E++ G P ++ +++K L F T
Sbjct: 175 VGDTQYGPPVDVWAIGCVFAELLSG-VPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTN 233
Query: 369 S---------PSSMS---------EYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
P M Y A L+ G L+ DP RL ++ + HP+F+
Sbjct: 234 QYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQ----LLHHPYFE 289
Query: 411 GL 412
+
Sbjct: 290 NI 291
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 117/296 (39%), Gaps = 64/296 (21%)
Query: 135 RAEMEKKILKMLDHPFLPTLYAEF------EASNFSCIVMEFCSGGDLHSLRHKQPHKRF 188
RA E ++K ++H + +L F E +VME ++ + H+R
Sbjct: 62 RAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERM 121
Query: 189 SLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXX 248
S + ++L +++LH GII+RDLKP N++V+SD + + DF L+ +
Sbjct: 122 S-----YLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT----- 171
Query: 249 XXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVG 308
S T TR R G + E V S +
Sbjct: 172 ------------SFMMTPYVVTRYYRAPEVILG-----------MGYKENVDIWSVGCI- 207
Query: 309 THEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK-KP----L 363
E V ++ G + +D W I E + P + T+RN V+ +P L
Sbjct: 208 MGEMVRHKILFPGR--DYIDQWNKVI---EQLGTPCPEFMKKLQPTVRNYVENRPKYAGL 262
Query: 364 TFPTQSPSSM----SEYH------ARDLISGLLNKDPCNRLGSKRGAADVKTHPFF 409
TFP P S+ SE++ ARDL+S +L DP R+ D HP+
Sbjct: 263 TFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI----SVDDALQHPYI 314
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 70/165 (42%), Gaps = 14/165 (8%)
Query: 76 GLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHR 135
G+ D L+R +G G G VY Y +G + + +
Sbjct: 20 GIAREDVVLNRILGEGFFGEVY----EGVYTNHKGEK----INVAVKTCKKDCTLDNKEK 71
Query: 136 AEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDL-HSL-RHKQPHKRFSLTSA 193
E I+K LDHP + L E + I+ME G+L H L R+K K +L
Sbjct: 72 FMSEAVIMKNLDHPHIVKLIGIIEEEP-TWIIMELYPYGELGHYLERNKNSLKVLTLV-- 128
Query: 194 RFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
Y+ ++ A+ YL + ++RD+ N+LV S + L DF LS
Sbjct: 129 -LYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLS 172
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 49/102 (48%), Gaps = 6/102 (5%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARF--Y 196
E ++ DHP + L N I+ME C+ G+L S ++FSL A Y
Sbjct: 441 EALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQV---RKFSLDLASLILY 496
Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
A ++ AL YL ++RD+ NVLV + + L DF LS
Sbjct: 497 AYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLS 538
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 117/296 (39%), Gaps = 64/296 (21%)
Query: 135 RAEMEKKILKMLDHPFLPTLYAEF------EASNFSCIVMEFCSGGDLHSLRHKQPHKRF 188
RA E ++K ++H + +L F E +VME ++ + H+R
Sbjct: 68 RAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERM 127
Query: 189 SLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXX 248
S + ++L +++LH GII+RDLKP N++V+SD + + DF L+ +
Sbjct: 128 S-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT----- 177
Query: 249 XXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVG 308
S T TR R G + E V S +
Sbjct: 178 ------------SFMMTPYVVTRYYRAPEVILG-----------MGYKENVDIWSVGCI- 213
Query: 309 THEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK-KP----L 363
E V ++ G + +D W I E + P + T+RN V+ +P L
Sbjct: 214 MGEMVRHKILFPGR--DYIDQWNKVI---EQLGTPCPEFMKKLQPTVRNYVENRPKYAGL 268
Query: 364 TFPTQSPSSM----SEYH------ARDLISGLLNKDPCNRLGSKRGAADVKTHPFF 409
TFP P S+ SE++ ARDL+S +L DP R+ D HP+
Sbjct: 269 TFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI----SVDDALQHPYI 320
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 117/296 (39%), Gaps = 64/296 (21%)
Query: 135 RAEMEKKILKMLDHPFLPTLYAEF------EASNFSCIVMEFCSGGDLHSLRHKQPHKRF 188
RA E ++K ++H + +L F E +VME ++ + H+R
Sbjct: 63 RAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERM 122
Query: 189 SLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXX 248
S + ++L +++LH GII+RDLKP N++V+SD + + DF L+ +
Sbjct: 123 S-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT----- 172
Query: 249 XXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVG 308
S T TR R G + E V S +
Sbjct: 173 ------------SFMMTPYVVTRYYRAPEVILG-----------MGYKENVDIWSVGCI- 208
Query: 309 THEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK-KP----L 363
E V ++ G + +D W I E + P + T+RN V+ +P L
Sbjct: 209 MGEMVRHKILFPGR--DYIDQWNKVI---EQLGTPCPEFMKKLQPTVRNYVENRPKYAGL 263
Query: 364 TFPTQSPSSM----SEYH------ARDLISGLLNKDPCNRLGSKRGAADVKTHPFF 409
TFP P S+ SE++ ARDL+S +L DP R+ D HP+
Sbjct: 264 TFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI----SVDDALQHPYI 315
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 117/296 (39%), Gaps = 64/296 (21%)
Query: 135 RAEMEKKILKMLDHPFLPTLYAEF------EASNFSCIVMEFCSGGDLHSLRHKQPHKRF 188
RA E ++K ++H + +L F E +VME ++ + H+R
Sbjct: 62 RAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERM 121
Query: 189 SLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXX 248
S + ++L +++LH GII+RDLKP N++V+SD + + DF L+ +
Sbjct: 122 S-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT----- 171
Query: 249 XXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVG 308
S T TR R G + E V S +
Sbjct: 172 ------------SFMMTPYVVTRYYRAPEVILG-----------MGYKENVDIWSVGCI- 207
Query: 309 THEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK-KP----L 363
E V ++ G + +D W I E + P + T+RN V+ +P L
Sbjct: 208 MGEMVRHKILFPGR--DYIDQWNKVI---EQLGTPCPEFMKKLQPTVRNYVENRPKYAGL 262
Query: 364 TFPTQSPSSM----SEYH------ARDLISGLLNKDPCNRLGSKRGAADVKTHPFF 409
TFP P S+ SE++ ARDL+S +L DP R+ D HP+
Sbjct: 263 TFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI----SVDDALQHPYI 314
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 69/181 (38%), Gaps = 61/181 (33%)
Query: 166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVR 225
IVME ++ + H+R S + ++L +++LH GII+RDLKP N++V+
Sbjct: 106 IVMELMDANLCQVIQMELDHERMS-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK 160
Query: 226 SDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKI 285
SD + + DF L+ R G+
Sbjct: 161 SDCTLKILDFGLA---------------------------------------RTAGTS-- 179
Query: 286 QTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTP 345
F+ EP V T Y +PEV G + VD W+ G + EM+ +
Sbjct: 180 --------FMMEPE-------VVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKIL 224
Query: 346 F 346
F
Sbjct: 225 F 225
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 117/296 (39%), Gaps = 64/296 (21%)
Query: 135 RAEMEKKILKMLDHPFLPTLYAEF------EASNFSCIVMEFCSGGDLHSLRHKQPHKRF 188
RA E ++K ++H + +L F E +VME ++ + H+R
Sbjct: 70 RAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERM 129
Query: 189 SLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXX 248
S + ++L +++LH GII+RDLKP N++V+SD + + DF L+ +
Sbjct: 130 S-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT----- 179
Query: 249 XXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVG 308
S T TR R G + E V S +
Sbjct: 180 ------------SFMMTPYVVTRYYRAPEVILG-----------MGYKENVDIWSVGCI- 215
Query: 309 THEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK-KP----L 363
E V ++ G + +D W I E + P + T+RN V+ +P L
Sbjct: 216 MGEMVRHKILFPGR--DYIDQWNKVI---EQLGTPCPEFMKKLQPTVRNYVENRPKYAGL 270
Query: 364 TFPTQSPSSM----SEYH------ARDLISGLLNKDPCNRLGSKRGAADVKTHPFF 409
TFP P S+ SE++ ARDL+S +L DP R+ D HP+
Sbjct: 271 TFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI----SVDDALQHPYI 322
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 117/296 (39%), Gaps = 64/296 (21%)
Query: 135 RAEMEKKILKMLDHPFLPTLYAEF------EASNFSCIVMEFCSGGDLHSLRHKQPHKRF 188
RA E ++K ++H + +L F E +VME ++ + H+R
Sbjct: 69 RAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERM 128
Query: 189 SLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXX 248
S + ++L +++LH GII+RDLKP N++V+SD + + DF L+ +
Sbjct: 129 S-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT----- 178
Query: 249 XXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVG 308
S T TR R G + E V S +
Sbjct: 179 ------------SFMMTPYVVTRYYRAPEVILG-----------MGYKENVDIWSVGCI- 214
Query: 309 THEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK-KP----L 363
E V ++ G + +D W I E + P + T+RN V+ +P L
Sbjct: 215 MGEMVRHKILFPGR--DYIDQWNKVI---EQLGTPCPEFMKKLQPTVRNYVENRPKYAGL 269
Query: 364 TFPTQSPSSM----SEYH------ARDLISGLLNKDPCNRLGSKRGAADVKTHPFF 409
TFP P S+ SE++ ARDL+S +L DP R+ D HP+
Sbjct: 270 TFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI----SVDDALQHPYI 321
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 117/296 (39%), Gaps = 64/296 (21%)
Query: 135 RAEMEKKILKMLDHPFLPTLYAEF------EASNFSCIVMEFCSGGDLHSLRHKQPHKRF 188
RA E ++K ++H + +L F E +VME ++ + H+R
Sbjct: 69 RAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERM 128
Query: 189 SLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXX 248
S + ++L +++LH GII+RDLKP N++V+SD + + DF L+ +
Sbjct: 129 S-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT----- 178
Query: 249 XXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVG 308
S T TR R G + E V S +
Sbjct: 179 ------------SFMMTPYVVTRYYRAPEVILG-----------MGYKENVDIWSVGCI- 214
Query: 309 THEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK-KP----L 363
E V ++ G + +D W I E + P + T+RN V+ +P L
Sbjct: 215 MGEMVRHKILFPGR--DYIDQWNKVI---EQLGTPCPEFMKKLQPTVRNYVENRPKYAGL 269
Query: 364 TFPTQSPSSM----SEYH------ARDLISGLLNKDPCNRLGSKRGAADVKTHPFF 409
TFP P S+ SE++ ARDL+S +L DP R+ D HP+
Sbjct: 270 TFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI----SVDDALQHPYI 321
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 117/296 (39%), Gaps = 64/296 (21%)
Query: 135 RAEMEKKILKMLDHPFLPTLYAEF------EASNFSCIVMEFCSGGDLHSLRHKQPHKRF 188
RA E ++K ++H + +L F E +VME ++ + H+R
Sbjct: 63 RAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERM 122
Query: 189 SLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXX 248
S + ++L +++LH GII+RDLKP N++V+SD + + DF L+ +
Sbjct: 123 S-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT----- 172
Query: 249 XXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVG 308
S T TR R G + E V S +
Sbjct: 173 ------------SFMMTPYVVTRYYRAPEVILG-----------MGYKENVDIWSVGCI- 208
Query: 309 THEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK-KP----L 363
E V ++ G + +D W I E + P + T+RN V+ +P L
Sbjct: 209 MGEMVRHKILFPGR--DYIDQWNKVI---EQLGTPCPEFMKKLQPTVRNYVENRPKYAGL 263
Query: 364 TFPTQSPSSM----SEYH------ARDLISGLLNKDPCNRLGSKRGAADVKTHPFF 409
TFP P S+ SE++ ARDL+S +L DP R+ D HP+
Sbjct: 264 TFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI----SVDDALQHPYI 315
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 117/296 (39%), Gaps = 64/296 (21%)
Query: 135 RAEMEKKILKMLDHPFLPTLYAEF------EASNFSCIVMEFCSGGDLHSLRHKQPHKRF 188
RA E ++K ++H + +L F E +VME ++ + H+R
Sbjct: 70 RAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERM 129
Query: 189 SLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXX 248
S + ++L +++LH GII+RDLKP N++V+SD + + DF L+ +
Sbjct: 130 S-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT----- 179
Query: 249 XXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVG 308
S T TR R G + E V S +
Sbjct: 180 ------------SFMMTPYVVTRYYRAPEVILG-----------MGYKENVDIWSVGCI- 215
Query: 309 THEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK-KP----L 363
E V ++ G + +D W I E + P + T+RN V+ +P L
Sbjct: 216 MGEMVRHKILFPGR--DYIDQWNKVI---EQLGTPCPEFMKKLQPTVRNYVENRPKYAGL 270
Query: 364 TFPTQSPSSM----SEYH------ARDLISGLLNKDPCNRLGSKRGAADVKTHPFF 409
TFP P S+ SE++ ARDL+S +L DP R+ D HP+
Sbjct: 271 TFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI----SVDDALQHPYI 322
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 70/165 (42%), Gaps = 14/165 (8%)
Query: 76 GLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHR 135
G+ D L+R +G G G VY Y +G + + +
Sbjct: 4 GIAREDVVLNRILGEGFFGEVY----EGVYTNHKGEK----INVAVKTCKKDCTLDNKEK 55
Query: 136 AEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDL-HSL-RHKQPHKRFSLTSA 193
E I+K LDHP + L E + I+ME G+L H L R+K K +L
Sbjct: 56 FMSEAVIMKNLDHPHIVKLIGIIEEEP-TWIIMELYPYGELGHYLERNKNSLKVLTLV-- 112
Query: 194 RFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
Y+ ++ A+ YL + ++RD+ N+LV S + L DF LS
Sbjct: 113 -LYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLS 156
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 65/186 (34%), Gaps = 60/186 (32%)
Query: 166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVR 225
+VMEFC G + L + E+L L +LH +I+RD+K +NVL+
Sbjct: 104 LVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLT 163
Query: 226 SDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKI 285
+ + L DF +S L+R G
Sbjct: 164 ENAEVKLVDFGVSAQ-----------------------------------LDRTVG---- 184
Query: 286 QTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAV-----DWWAFGIFIYEMI 340
R +F+GT +++PEV + + +A D W+ GI EM
Sbjct: 185 ----------------RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMA 228
Query: 341 YGRTPF 346
G P
Sbjct: 229 EGAPPL 234
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 121/334 (36%), Gaps = 108/334 (32%)
Query: 135 RAEMEKKILKMLDHPFLPTLYAEF------EASNFSCIVMEFCSGGDLHSLRHKQPHKRF 188
RA E ++K ++H + +L F E +VME ++ + H+R
Sbjct: 107 RAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERM 166
Query: 189 SLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXX 248
S + ++L +++LH GII+RDLKP N+ ++ SD L +
Sbjct: 167 S-----YLLYQMLCGIKHLHSAGIIHRDLKPSNI-------VVKSDCTLKI--------- 205
Query: 249 XXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVG 308
L L R G+ F+ P +V
Sbjct: 206 -----------------------LDFGLARTAGTS----------FMMTP-------YVV 225
Query: 309 THEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPF----------------AAPSNE 352
T Y +PEV G + VD W+ G + EM+ + F P E
Sbjct: 226 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPE 285
Query: 353 ------TTLRNIVK-KP----LTFPTQSPSSM----SEYH------ARDLISGLLNKDPC 391
T+RN V+ +P LTFP P S+ SE++ ARDL+S +L DP
Sbjct: 286 FMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPA 345
Query: 392 NRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEI 425
R+ D HP+ PP+I
Sbjct: 346 KRI----SVDDALQHPYINVWYDPAEVEAPPPQI 375
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 121/312 (38%), Gaps = 64/312 (20%)
Query: 135 RAEMEKKILKMLDHPFLPTLYAEF------EASNFSCIVMEFCSGGDLHSLRHKQPHKRF 188
RA E ++K ++H + +L F E +VME ++ + H+R
Sbjct: 107 RAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERM 166
Query: 189 SLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXX 248
S + ++L +++LH GII+RDLKP N++V+SD + + DF L+ +
Sbjct: 167 S-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT----- 216
Query: 249 XXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVG 308
S T TR R G + E V S +
Sbjct: 217 ------------SFMMTPYVVTRYYRAPEVILG-----------MGYKENVDIWSVGCI- 252
Query: 309 THEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK-KP----L 363
E V ++ G + +D W I E + P + T+RN V+ +P L
Sbjct: 253 MGEMVRHKILFPGR--DYIDQWNKVI---EQLGTPCPEFMKKLQPTVRNYVENRPKYAGL 307
Query: 364 TFPTQSPSSM----SEYH------ARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLN 413
TFP P S+ SE++ ARDL+S +L DP R+ D HP+
Sbjct: 308 TFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI----SVDDALQHPYINVWY 363
Query: 414 FALIRSLTPPEI 425
PP+I
Sbjct: 364 DPAEVEAPPPQI 375
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 85/232 (36%), Gaps = 63/232 (27%)
Query: 154 LYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGII 213
+ F N C+ E S +L+ L K + FSL R +A +L L+ LH II
Sbjct: 164 MLENFTFRNHICMTFELLSM-NLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRII 222
Query: 214 YRDLKPENVLVRSDGH--IMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYTRQYSTR 271
+ DLKPEN+L++ G I + DF S + R Y+
Sbjct: 223 HCDLKPENILLKQQGRSGIKVIDFGSS----------------------CYEHQRVYTXI 260
Query: 272 LSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWA 331
SRF Y +PEV G +G +D W+
Sbjct: 261 QSRF------------------------------------YRAPEVILGARYGMPIDMWS 284
Query: 332 FGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLIS 383
G + E++ G P +E + + L P+Q S+ A++ +S
Sbjct: 285 LGCILAELLTG-YPLLPGEDEGDQLACMIELLGMPSQKLLDASK-RAKNFVS 334
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 85/232 (36%), Gaps = 63/232 (27%)
Query: 154 LYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGII 213
+ F N C+ E S +L+ L K + FSL R +A +L L+ LH II
Sbjct: 164 MLENFTFRNHICMTFELLSM-NLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRII 222
Query: 214 YRDLKPENVLVRSDGH--IMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYTRQYSTR 271
+ DLKPEN+L++ G I + DF S + R Y+
Sbjct: 223 HCDLKPENILLKQQGRSGIKVIDFGSS----------------------CYEHQRVYTXI 260
Query: 272 LSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWA 331
SRF Y +PEV G +G +D W+
Sbjct: 261 QSRF------------------------------------YRAPEVILGARYGMPIDMWS 284
Query: 332 FGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLIS 383
G + E++ G P +E + + L P+Q S+ A++ +S
Sbjct: 285 LGCILAELLTG-YPLLPGEDEGDQLACMIELLGMPSQKLLDASK-RAKNFVS 334
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVR 225
IVME ++ + H+R S + ++L +++LH GII+RDLKP N++V+
Sbjct: 106 IVMELMDANLSQVIQMELDHERMS-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK 160
Query: 226 SDGHIMLSDFDLS 238
SD + + DF L+
Sbjct: 161 SDATLKILDFGLA 173
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 11/110 (10%)
Query: 135 RAEMEKKILKMLDHPFLPTLYAEF------EASNFSCIVMEFCSGGDLHSLRHKQPHKRF 188
RA E ++K ++H + L F E IVME ++ + H+R
Sbjct: 71 RAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERM 130
Query: 189 SLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
S + ++L +++LH GII+RDLKP N++V+SD + + DF L+
Sbjct: 131 S-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 175
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 26/56 (46%)
Query: 306 FVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKK 361
FV T Y +PEV G + VD W+ G + EMI G F + ++++
Sbjct: 187 FVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQ 242
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVR 225
IVME ++ + H+R S + ++L +++LH GII+RDLKP N++V+
Sbjct: 106 IVMELMDANLCQVIQMELDHERMS-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK 160
Query: 226 SDGHIMLSDFDLS 238
SD + + DF L+
Sbjct: 161 SDCTLKILDFGLA 173
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 56/158 (35%), Gaps = 43/158 (27%)
Query: 307 VGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSN--------------- 351
V T Y +PEV G + VD W+ G + EMI G F +
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPC 245
Query: 352 -------ETTLRNIVKK--------------PLTFPTQSP-SSMSEYHARDLISGLLNKD 389
+ T+R V+ + FP S +++ ARDL+S +L D
Sbjct: 246 PEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNALKASQARDLLSKMLVID 305
Query: 390 PCNRLGSKRGAAD-VKTHPFFKGLNFALIRSLTPPEIP 426
SKR + D HP+ PP+IP
Sbjct: 306 -----ASKRISVDEALQHPYINVWYDPSEAEAPPPKIP 338
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 11/110 (10%)
Query: 135 RAEMEKKILKMLDHPFLPTLYAEF------EASNFSCIVMEFCSGGDLHSLRHKQPHKRF 188
RA E ++K ++H + L F E IVME ++ + H+R
Sbjct: 70 RAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERM 129
Query: 189 SLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
S + ++L +++LH GII+RDLKP N++V+SD + + DF L+
Sbjct: 130 S-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 174
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 11/110 (10%)
Query: 135 RAEMEKKILKMLDHPFLPTLYAEF------EASNFSCIVMEFCSGGDLHSLRHKQPHKRF 188
RA E ++K ++H + L F E IVME ++ + H+R
Sbjct: 74 RAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERM 133
Query: 189 SLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
S + ++L +++LH GII+RDLKP N++V+SD + + DF L+
Sbjct: 134 S-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 178
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/284 (20%), Positives = 100/284 (35%), Gaps = 65/284 (22%)
Query: 86 RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKKILKM 145
+RIG+G GTVY K+ D + + A R IL
Sbjct: 14 QRIGSGSFGTVY----KGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 69
Query: 146 LDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALE 205
+ + P L IV ++C G L+ H +F + A + ++
Sbjct: 70 MGYSTAPQL----------AIVTQWCEGSSLYHHLHI-IETKFEMIKLIDIARQTAQGMD 118
Query: 206 YLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYT 265
YLH II+RDLK N+ + D + + DF L+
Sbjct: 119 YLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVK------------------------ 154
Query: 266 RQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGN 325
+R+ GS + + L+ + L++A V + +
Sbjct: 155 -----------SRWSGSHQFEQLSGSILWMAPEVI---------------RMQDKNPYSF 188
Query: 326 AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQS 369
D +AFGI +YE++ G+ P++ +N + +V + P S
Sbjct: 189 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLS 232
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 11/110 (10%)
Query: 135 RAEMEKKILKMLDHPFLPTLYAEF------EASNFSCIVMEFCSGGDLHSLRHKQPHKRF 188
RA E ++K ++H + L F E IVME ++ + H+R
Sbjct: 69 RAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERM 128
Query: 189 SLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
S + ++L +++LH GII+RDLKP N++V+SD + + DF L+
Sbjct: 129 S-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 11/110 (10%)
Query: 135 RAEMEKKILKMLDHPFLPTLYAEF------EASNFSCIVMEFCSGGDLHSLRHKQPHKRF 188
RA E ++K ++H + L F E IVME ++ + H+R
Sbjct: 69 RAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERM 128
Query: 189 SLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
S + ++L +++LH GII+RDLKP N++V+SD + + DF L+
Sbjct: 129 S-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/284 (20%), Positives = 100/284 (35%), Gaps = 65/284 (22%)
Query: 86 RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKKILKM 145
+RIG+G GTVY K+ D + + A R IL
Sbjct: 19 QRIGSGSFGTVY----KGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 74
Query: 146 LDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALE 205
+ + P L IV ++C G L+ H K F + A + ++
Sbjct: 75 MGYSTKPQL----------AIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMD 123
Query: 206 YLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYT 265
YLH II+RDLK N+ + D + + DF L+
Sbjct: 124 YLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVK------------------------ 159
Query: 266 RQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGN 325
+R+ GS + + L+ + L++A V + +
Sbjct: 160 -----------SRWSGSHQFEQLSGSILWMAPEVI---------------RMQDKNPYSF 193
Query: 326 AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQS 369
D +AFGI +YE++ G+ P++ +N + +V + P S
Sbjct: 194 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLS 237
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVR 225
IVME ++ + H+R S + ++L +++LH GII+RDLKP N++V+
Sbjct: 100 IVMELMDANLCQVIQMELDHERMS-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK 154
Query: 226 SDGHIMLSDFDLS 238
SD + + DF L+
Sbjct: 155 SDCTLKILDFGLA 167
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/284 (20%), Positives = 100/284 (35%), Gaps = 65/284 (22%)
Query: 86 RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKKILKM 145
+RIG+G GTVY K+ D + + A R IL
Sbjct: 41 QRIGSGSFGTVY----KGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 96
Query: 146 LDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALE 205
+ + P L IV ++C G L+ H K F + A + ++
Sbjct: 97 MGYSTKPQL----------AIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMD 145
Query: 206 YLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYT 265
YLH II+RDLK N+ + D + + DF L+
Sbjct: 146 YLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVK------------------------ 181
Query: 266 RQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGN 325
+R+ GS + + L+ + L++A V + +
Sbjct: 182 -----------SRWSGSHQFEQLSGSILWMAPEVI---------------RMQDKNPYSF 215
Query: 326 AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQS 369
D +AFGI +YE++ G+ P++ +N + +V + P S
Sbjct: 216 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLS 259
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 105/293 (35%), Gaps = 74/293 (25%)
Query: 136 AEMEKKILKMLD-HPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSAR 194
A+ E ++L+ D HP + + + F I +E C+ +L+ K F+
Sbjct: 64 ADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCAA----TLQEYVEQKDFAHLGLE 119
Query: 195 --FYAAEVLVALEYLHMLGIIYRDLKPENVLV---RSDGHI--MLSDFDLSLCSNAIXXX 247
+ L +LH L I++RDLKP N+L+ + G I M+SDF LC
Sbjct: 120 PITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDF--GLC------- 170
Query: 248 XXXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFV 307
+L V +R
Sbjct: 171 -------------------------------------------KKLAVGRHSFSRRSGVP 187
Query: 308 GTHEYVSPEVASGGSHGN---AVDWWAFG-IFIYEMIYGRTPFAAPSNETTLRNIVKKPL 363
GT +++PE+ S N VD ++ G +F Y + G PF NI+
Sbjct: 188 GTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQA--NILLGAC 245
Query: 364 TFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFAL 416
+ P + AR+LI ++ DP R +K V HPFF L L
Sbjct: 246 SLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKH----VLKHPFFWSLEKQL 294
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/284 (20%), Positives = 100/284 (35%), Gaps = 65/284 (22%)
Query: 86 RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKKILKM 145
+RIG+G GTVY K+ D + + A R IL
Sbjct: 42 QRIGSGSFGTVY----KGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 97
Query: 146 LDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALE 205
+ + P L IV ++C G L+ H K F + A + ++
Sbjct: 98 MGYSTKPQL----------AIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMD 146
Query: 206 YLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYT 265
YLH II+RDLK N+ + D + + DF L+
Sbjct: 147 YLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVK------------------------ 182
Query: 266 RQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGN 325
+R+ GS + + L+ + L++A V + +
Sbjct: 183 -----------SRWSGSHQFEQLSGSILWMAPEVI---------------RMQDKNPYSF 216
Query: 326 AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQS 369
D +AFGI +YE++ G+ P++ +N + +V + P S
Sbjct: 217 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLS 260
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/284 (20%), Positives = 100/284 (35%), Gaps = 65/284 (22%)
Query: 86 RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKKILKM 145
+RIG+G GTVY K+ D + + A R IL
Sbjct: 19 QRIGSGSFGTVY----KGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 74
Query: 146 LDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALE 205
+ + P L IV ++C G L+ H K F + A + ++
Sbjct: 75 MGYSTKPQL----------AIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMD 123
Query: 206 YLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYT 265
YLH II+RDLK N+ + D + + DF L+
Sbjct: 124 YLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVK------------------------ 159
Query: 266 RQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGN 325
+R+ GS + + L+ + L++A V + +
Sbjct: 160 -----------SRWSGSHQFEQLSGSILWMAPEVI---------------RMQDKNPYSF 193
Query: 326 AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQS 369
D +AFGI +YE++ G+ P++ +N + +V + P S
Sbjct: 194 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLS 237
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/284 (20%), Positives = 100/284 (35%), Gaps = 65/284 (22%)
Query: 86 RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKKILKM 145
+RIG+G GTVY K+ D + + A R IL
Sbjct: 14 QRIGSGSFGTVY----KGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 69
Query: 146 LDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALE 205
+ + P L IV ++C G L+ H +F + A + ++
Sbjct: 70 MGYSTKPQL----------AIVTQWCEGSSLYHHLHI-IETKFEMIKLIDIARQTAQGMD 118
Query: 206 YLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYT 265
YLH II+RDLK N+ + D + + DF L+
Sbjct: 119 YLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVK------------------------ 154
Query: 266 RQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGN 325
+R+ GS + + L+ + L++A V + +
Sbjct: 155 -----------SRWSGSHQFEQLSGSILWMAPEVI---------------RMQDKNPYSF 188
Query: 326 AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQS 369
D +AFGI +YE++ G+ P++ +N + +V + P S
Sbjct: 189 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLS 232
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 56/124 (45%), Gaps = 6/124 (4%)
Query: 307 VGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFP 366
VGT +++PEV +G VD W G+ ++ ++ G PF + E I+K
Sbjct: 194 VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYG-TKERLFEGIIKGKYKMN 252
Query: 367 TQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEIP 426
+ S +SE A+DL+ +L DP R+ + HP+ K + + P +
Sbjct: 253 PRQWSHISE-SAKDLVRRMLMLDPAERI----TVYEALNHPWLKERDRYAYKIHLPETVE 307
Query: 427 GMRR 430
+R+
Sbjct: 308 QLRK 311
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDL--HSLRHKQPHKRFSLTSARFY 196
E I ML HP + L + + +V EF G DL ++ +S A Y
Sbjct: 76 EASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHY 135
Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLVRS 226
++L AL Y H II+RD+KP VL+ S
Sbjct: 136 MRQILEALRYCHDNNIIHRDVKPHCVLLAS 165
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/284 (20%), Positives = 100/284 (35%), Gaps = 65/284 (22%)
Query: 86 RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKKILKM 145
+RIG+G GTVY K+ D + + A R IL
Sbjct: 16 QRIGSGSFGTVY----KGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 71
Query: 146 LDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALE 205
+ + P L IV ++C G L+ H K F + A + ++
Sbjct: 72 MGYSTKPQL----------AIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMD 120
Query: 206 YLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYT 265
YLH II+RDLK N+ + D + + DF L+
Sbjct: 121 YLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVK------------------------ 156
Query: 266 RQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGN 325
+R+ GS + + L+ + L++A V + +
Sbjct: 157 -----------SRWSGSHQFEQLSGSILWMAPEVI---------------RMQDKNPYSF 190
Query: 326 AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQS 369
D +AFGI +YE++ G+ P++ +N + +V + P S
Sbjct: 191 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLS 234
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 54/109 (49%), Gaps = 8/109 (7%)
Query: 135 RAEMEKKILKMLDHPFLPTLYAEF----EASNFSCI-VMEFCSGGDLHSLRHKQPHKRFS 189
R E ++LK L H + L F +FS + ++ G DL+++ Q S
Sbjct: 73 RTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQA---LS 129
Query: 190 LTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+F ++L L+Y+H GII+RDLKP NV V D + + DF L+
Sbjct: 130 DEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLA 178
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 6/104 (5%)
Query: 307 VGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFP 366
VGT +++PEV +G VD W G+ ++ ++ G PF + E I+K
Sbjct: 196 VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYG-TKERLFEGIIKGKYKMN 254
Query: 367 TQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
+ S +SE A+DL+ +L DP R+ + HP+ K
Sbjct: 255 PRQWSHISE-SAKDLVRRMLMLDPAERI----TVYEALNHPWLK 293
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDL--HSLRHKQPHKRFSLTSARFY 196
E I ML HP + L + + +V EF G DL ++ +S A Y
Sbjct: 78 EASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHY 137
Query: 197 AAEVLVALEYLHMLGIIYRDLKPENVLVRS 226
++L AL Y H II+RD+KP VL+ S
Sbjct: 138 MRQILEALRYCHDNNIIHRDVKPHCVLLAS 167
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 6/107 (5%)
Query: 305 SFVGTHEYVSPEVASGGSH-GNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPL 363
S VGT Y++PEV + G D W+ G+ +Y M+ G PF P R +++ L
Sbjct: 176 STVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRIL 235
Query: 364 TFPTQSPSSMS-EYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFF 409
+ P + LIS + DP R+ ++KTH +F
Sbjct: 236 SVKYSIPDDIRISPECCHLISRIFVADPATRI----SIPEIKTHSWF 278
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLV 224
I+ME+ SGG+L+ RFS ARF+ ++L + Y H + I +RDLK EN L+
Sbjct: 93 IIMEYASGGELYERICNA--GRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLL 149
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 11/110 (10%)
Query: 135 RAEMEKKILKMLDHPFLPTLYAEF------EASNFSCIVMEFCSGGDLHSLRHKQPHKRF 188
RA E ++K ++H + L F E IVME ++ + H+R
Sbjct: 69 RAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERM 128
Query: 189 SLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
S + ++L +++LH GII+RDLKP N++V+SD + + DF L+
Sbjct: 129 S-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 89/230 (38%), Gaps = 63/230 (27%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASN------FSCIVMEFCSGGDLHSLRHKQPHKR-FSLT 191
E +I++ LDH + L F +S + +V+++ RH K+ +
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVI 122
Query: 192 SARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXX 251
+ Y ++ +L Y+H GI +RD+KP+N+L+ D + L LC
Sbjct: 123 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV------LKLCD---------- 166
Query: 252 XXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE 311
FGS K +L EP + CS
Sbjct: 167 ----------------------------FGSAK-------QLVRGEPNVSXICS----RY 187
Query: 312 YVSPEVASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK 360
Y +PE+ G + + +++D W+ G + E++ G+ F S L I+K
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 237
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 91/230 (39%), Gaps = 63/230 (27%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASN------FSCIVMEFCSGGDLHSLRHKQPHKR-FSLT 191
E +I++ LDH + L F +S + +V+++ RH K+ +
Sbjct: 97 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 156
Query: 192 SARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXX 251
+ Y ++ +L Y+H GI +RD+KP+N+L+ D + L LC
Sbjct: 157 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV------LKLCD---------- 200
Query: 252 XXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE 311
FGS K +L EP + S++ +
Sbjct: 201 ----------------------------FGSAK-------QLVRGEP----NVSYICSRY 221
Query: 312 YVSPEVASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK 360
Y +PE+ G + + +++D W+ G + E++ G+ F S L I+K
Sbjct: 222 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 271
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 91/230 (39%), Gaps = 63/230 (27%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASN------FSCIVMEFCSGGDLHSLRHKQPHKR-FSLT 191
E +I++ LDH + L F +S + +V+++ RH K+ +
Sbjct: 76 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 135
Query: 192 SARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXX 251
+ Y ++ +L Y+H GI +RD+KP+N+L+ D + L LC
Sbjct: 136 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV------LKLCD---------- 179
Query: 252 XXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE 311
FGS K +L EP + S++ +
Sbjct: 180 ----------------------------FGSAK-------QLVRGEP----NVSYICSRY 200
Query: 312 YVSPEVASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK 360
Y +PE+ G + + +++D W+ G + E++ G+ F S L I+K
Sbjct: 201 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 250
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 91/230 (39%), Gaps = 63/230 (27%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASN------FSCIVMEFCSGGDLHSLRHKQPHKR-FSLT 191
E +I++ LDH + L F +S + +V+++ RH K+ +
Sbjct: 99 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 158
Query: 192 SARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXX 251
+ Y ++ +L Y+H GI +RD+KP+N+L+ D + L LC
Sbjct: 159 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV------LKLCD---------- 202
Query: 252 XXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE 311
FGS K +L EP + S++ +
Sbjct: 203 ----------------------------FGSAK-------QLVRGEP----NVSYICSRY 223
Query: 312 YVSPEVASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK 360
Y +PE+ G + + +++D W+ G + E++ G+ F S L I+K
Sbjct: 224 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 273
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 91/230 (39%), Gaps = 63/230 (27%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASN------FSCIVMEFCSGGDLHSLRHKQPHKR-FSLT 191
E +I++ LDH + L F +S + +V+++ RH K+ +
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 122
Query: 192 SARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXX 251
+ Y ++ +L Y+H GI +RD+KP+N+L+ D + L LC
Sbjct: 123 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV------LKLCD---------- 166
Query: 252 XXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE 311
FGS K +L EP + S++ +
Sbjct: 167 ----------------------------FGSAK-------QLVRGEP----NVSYICSRY 187
Query: 312 YVSPEVASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK 360
Y +PE+ G + + +++D W+ G + E++ G+ F S L I+K
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 237
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 83/232 (35%), Gaps = 63/232 (27%)
Query: 154 LYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGII 213
+ F N C+ E S +L+ L K + FSL R +A +L L+ LH II
Sbjct: 164 MLENFTFRNHICMTFELLSM-NLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRII 222
Query: 214 YRDLKPENVLVRSDGH--IMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYTRQYSTR 271
+ DLKPEN+L++ G I + DF S + R Y
Sbjct: 223 HCDLKPENILLKQQGRSGIKVIDFGSS----------------------CYEHQRVYXXI 260
Query: 272 LSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWA 331
SRF Y +PEV G +G +D W+
Sbjct: 261 QSRF------------------------------------YRAPEVILGARYGMPIDMWS 284
Query: 332 FGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLIS 383
G + E++ G P +E + + L P Q S+ A++ +S
Sbjct: 285 LGCILAELLTG-YPLLPGEDEGDQLACMIELLGMPXQKLLDASK-RAKNFVS 334
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 91/230 (39%), Gaps = 63/230 (27%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASN------FSCIVMEFCSGGDLHSLRHKQPHKR-FSLT 191
E +I++ LDH + L F +S + +V+++ RH K+ +
Sbjct: 68 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 127
Query: 192 SARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXX 251
+ Y ++ +L Y+H GI +RD+KP+N+L+ D + L LC
Sbjct: 128 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV------LKLCD---------- 171
Query: 252 XXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE 311
FGS K +L EP + S++ +
Sbjct: 172 ----------------------------FGSAK-------QLVRGEP----NVSYICSRY 192
Query: 312 YVSPEVASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK 360
Y +PE+ G + + +++D W+ G + E++ G+ F S L I+K
Sbjct: 193 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 242
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 309 THEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNET---TLRNIVKKPLTF 365
T +V+PEV + A D W+ G+ +Y + G TPFA ++T L I +
Sbjct: 183 TANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPFANGPDDTPEEILARIGSGKFSL 242
Query: 366 PTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFF 409
+S+S+ A+DL+S L+ DP RL AA V HP+
Sbjct: 243 SGGYWNSVSDT-AKDLVSKXLHVDPHQRL----TAALVLRHPWI 281
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
+L+ HP + TL ++ + +V E GG+L +Q K FS A +
Sbjct: 69 LLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQ--KFFSEREASAVLFTIT 126
Query: 202 VALEYLHMLGIIYRDLKPENVL 223
+EYLH G+++RDLKP N+L
Sbjct: 127 KTVEYLHAQGVVHRDLKPSNIL 148
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 91/230 (39%), Gaps = 63/230 (27%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASN------FSCIVMEFCSGGDLHSLRHKQPHKR-FSLT 191
E +I++ LDH + L F +S + +V+++ RH K+ +
Sbjct: 91 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 150
Query: 192 SARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXX 251
+ Y ++ +L Y+H GI +RD+KP+N+L+ D + L LC
Sbjct: 151 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV------LKLCD---------- 194
Query: 252 XXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE 311
FGS K +L EP + S++ +
Sbjct: 195 ----------------------------FGSAK-------QLVRGEP----NVSYICSRY 215
Query: 312 YVSPEVASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK 360
Y +PE+ G + + +++D W+ G + E++ G+ F S L I+K
Sbjct: 216 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 265
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 91/230 (39%), Gaps = 63/230 (27%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASN------FSCIVMEFCSGGDLHSLRHKQPHKR-FSLT 191
E +I++ LDH + L F +S + +V+++ RH K+ +
Sbjct: 142 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 201
Query: 192 SARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXX 251
+ Y ++ +L Y+H GI +RD+KP+N+L+ D + L LC
Sbjct: 202 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV------LKLCD---------- 245
Query: 252 XXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE 311
FGS K +L EP + S++ +
Sbjct: 246 ----------------------------FGSAK-------QLVRGEP----NVSYICSRY 266
Query: 312 YVSPEVASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK 360
Y +PE+ G + + +++D W+ G + E++ G+ F S L I+K
Sbjct: 267 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 316
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 91/230 (39%), Gaps = 63/230 (27%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASN------FSCIVMEFCSGGDLHSLRHKQPHKR-FSLT 191
E +I++ LDH + L F +S + +V+++ RH K+ +
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 122
Query: 192 SARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXX 251
+ Y ++ +L Y+H GI +RD+KP+N+L+ D + L LC
Sbjct: 123 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV------LKLCD---------- 166
Query: 252 XXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE 311
FGS K +L EP + S++ +
Sbjct: 167 ----------------------------FGSAK-------QLVRGEP----NVSYICSRY 187
Query: 312 YVSPEVASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK 360
Y +PE+ G + + +++D W+ G + E++ G+ F S L I+K
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 237
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 91/230 (39%), Gaps = 63/230 (27%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASN------FSCIVMEFCSGGDLHSLRHKQPHKR-FSLT 191
E +I++ LDH + L F +S + +V+++ RH K+ +
Sbjct: 101 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 160
Query: 192 SARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXX 251
+ Y ++ +L Y+H GI +RD+KP+N+L+ D + L LC
Sbjct: 161 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV------LKLCD---------- 204
Query: 252 XXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE 311
FGS K +L EP + S++ +
Sbjct: 205 ----------------------------FGSAK-------QLVRGEP----NVSYICSRY 225
Query: 312 YVSPEVASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK 360
Y +PE+ G + + +++D W+ G + E++ G+ F S L I+K
Sbjct: 226 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 275
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 83/223 (37%), Gaps = 64/223 (28%)
Query: 139 EKKILKMLDHPFLPTLYAEF-EASNFSC-IVMEFCSGGDLHSLRHKQPHKRFSLTSARF- 195
E +L+ L HP + Y + +N + IVME+C GGDL S+ K +R L
Sbjct: 55 EVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVL 114
Query: 196 -YAAEVLVALEYLHMLG-----IIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXX 249
++ +AL+ H +++RDLKP NV + ++ L DF
Sbjct: 115 RVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFG------------- 161
Query: 250 XXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGT 309
L+R LN + + FV P
Sbjct: 162 ----------------------LARILN--------HDTSFAKTFVGTPY---------- 181
Query: 310 HEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNE 352
Y+SPE + S+ D W+ G +YE+ PF A S +
Sbjct: 182 --YMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK 222
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 91/230 (39%), Gaps = 63/230 (27%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASN------FSCIVMEFCSGGDLHSLRHKQPHKR-FSLT 191
E +I++ LDH + L F +S + +V+++ RH K+ +
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 122
Query: 192 SARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXX 251
+ Y ++ +L Y+H GI +RD+KP+N+L+ D + L LC
Sbjct: 123 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV------LKLCD---------- 166
Query: 252 XXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE 311
FGS K +L EP + S++ +
Sbjct: 167 ----------------------------FGSAK-------QLVRGEP----NVSYICSRY 187
Query: 312 YVSPEVASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK 360
Y +PE+ G + + +++D W+ G + E++ G+ F S L I+K
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 237
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 46/107 (42%), Gaps = 6/107 (5%)
Query: 305 SFVGTHEYVSPEVASGGSH-GNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPL 363
S VGT Y++PEV + G D W+ G+ +Y M+ G PF P R + + L
Sbjct: 175 STVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRIL 234
Query: 364 TFPTQSPSSMS-EYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFF 409
P + R LIS + DP R+ +++ H +F
Sbjct: 235 NVQYAIPDYVHISPECRHLISRIFVADPAKRI----SIPEIRNHEWF 277
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 165 CIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLV 224
IVME+ SGG+L RFS ARF+ +++ + Y H + + +RDLK EN L+
Sbjct: 91 AIVMEYASGGEL--FERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLL 148
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 89/230 (38%), Gaps = 63/230 (27%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASN------FSCIVMEFCSGGDLHSLRHKQPHKR-FSLT 191
E +I++ LDH + L F +S + +V+++ RH K+ +
Sbjct: 67 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 126
Query: 192 SARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXX 251
+ Y ++ +L Y+H GI +RD+KP+N+L+ D + L LC
Sbjct: 127 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV------LKLCD---------- 170
Query: 252 XXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE 311
FGS K +L EP + CS
Sbjct: 171 ----------------------------FGSAK-------QLVRGEPNVSXICS----RY 191
Query: 312 YVSPEVASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK 360
Y +PE+ G + + +++D W+ G + E++ G+ F S L I+K
Sbjct: 192 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 241
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 89/230 (38%), Gaps = 63/230 (27%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASN------FSCIVMEFCSGGDLHSLRHKQPHKR-FSLT 191
E +I++ LDH + L F +S + +V+++ RH K+ +
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 122
Query: 192 SARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXX 251
+ Y ++ +L Y+H GI +RD+KP+N+L+ D + L LC
Sbjct: 123 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV------LKLCD---------- 166
Query: 252 XXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE 311
FGS K +L EP + CS
Sbjct: 167 ----------------------------FGSAK-------QLVRGEPNVSXICS----RY 187
Query: 312 YVSPEVASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK 360
Y +PE+ G + + +++D W+ G + E++ G+ F S L I+K
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 237
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 89/230 (38%), Gaps = 63/230 (27%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASN------FSCIVMEFCSGGDLHSLRHKQPHKR-FSLT 191
E +I++ LDH + L F +S + +V+++ RH K+ +
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 122
Query: 192 SARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXX 251
+ Y ++ +L Y+H GI +RD+KP+N+L+ D + L LC
Sbjct: 123 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV------LKLCD---------- 166
Query: 252 XXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE 311
FGS K +L EP + CS
Sbjct: 167 ----------------------------FGSAK-------QLVRGEPNVSXICS----RY 187
Query: 312 YVSPEVASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK 360
Y +PE+ G + + +++D W+ G + E++ G+ F S L I+K
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 237
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 89/230 (38%), Gaps = 63/230 (27%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASN------FSCIVMEFCSGGDLHSLRHKQPHKR-FSLT 191
E +I++ LDH + L F +S + +V+++ RH K+ +
Sbjct: 82 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 141
Query: 192 SARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXX 251
+ Y ++ +L Y+H GI +RD+KP+N+L+ D + L LC
Sbjct: 142 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV------LKLCD---------- 185
Query: 252 XXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE 311
FGS K +L EP + CS
Sbjct: 186 ----------------------------FGSAK-------QLVRGEPNVSXICS----RY 206
Query: 312 YVSPEVASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK 360
Y +PE+ G + + +++D W+ G + E++ G+ F S L I+K
Sbjct: 207 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 256
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 89/230 (38%), Gaps = 63/230 (27%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASN------FSCIVMEFCSGGDLHSLRHKQPHKR-FSLT 191
E +I++ LDH + L F +S + +V+++ RH K+ +
Sbjct: 75 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 134
Query: 192 SARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXX 251
+ Y ++ +L Y+H GI +RD+KP+N+L+ D + L LC
Sbjct: 135 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV------LKLCD---------- 178
Query: 252 XXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE 311
FGS K +L EP + CS
Sbjct: 179 ----------------------------FGSAK-------QLVRGEPNVSXICS----RY 199
Query: 312 YVSPEVASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK 360
Y +PE+ G + + +++D W+ G + E++ G+ F S L I+K
Sbjct: 200 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 249
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 89/230 (38%), Gaps = 63/230 (27%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASN------FSCIVMEFCSGGDLHSLRHKQPHKR-FSLT 191
E +I++ LDH + L F +S + +V+++ RH K+ +
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 122
Query: 192 SARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXX 251
+ Y ++ +L Y+H GI +RD+KP+N+L+ D + L LC
Sbjct: 123 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV------LKLCD---------- 166
Query: 252 XXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE 311
FGS K +L EP + CS
Sbjct: 167 ----------------------------FGSAK-------QLVRGEPNVSXICS----RY 187
Query: 312 YVSPEVASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK 360
Y +PE+ G + + +++D W+ G + E++ G+ F S L I+K
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 237
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 89/230 (38%), Gaps = 63/230 (27%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASN------FSCIVMEFCSGGDLHSLRHKQPHKR-FSLT 191
E +I++ LDH + L F +S + +V+++ RH K+ +
Sbjct: 75 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 134
Query: 192 SARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXX 251
+ Y ++ +L Y+H GI +RD+KP+N+L+ D + L LC
Sbjct: 135 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV------LKLCD---------- 178
Query: 252 XXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE 311
FGS K +L EP + CS
Sbjct: 179 ----------------------------FGSAK-------QLVRGEPNVSXICS----RY 199
Query: 312 YVSPEVASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK 360
Y +PE+ G + + +++D W+ G + E++ G+ F S L I+K
Sbjct: 200 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 249
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 46/107 (42%), Gaps = 6/107 (5%)
Query: 305 SFVGTHEYVSPEVASGGSH-GNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPL 363
S VGT Y++PEV + G D W+ G+ +Y M+ G PF P R + + L
Sbjct: 174 STVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRIL 233
Query: 364 TFPTQSPSSMS-EYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFF 409
P + R LIS + DP R+ +++ H +F
Sbjct: 234 NVQYAIPDYVHISPECRHLISRIFVADPAKRI----SIPEIRNHEWF 276
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 165 CIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLV 224
IVME+ SGG+L RFS ARF+ +++ + Y H + + +RDLK EN L+
Sbjct: 90 AIVMEYASGGEL--FERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLL 147
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 83/223 (37%), Gaps = 64/223 (28%)
Query: 139 EKKILKMLDHPFLPTLYAEF-EASNFSC-IVMEFCSGGDLHSLRHKQPHKRFSLTSARF- 195
E +L+ L HP + Y + +N + IVME+C GGDL S+ K +R L
Sbjct: 55 EVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVL 114
Query: 196 -YAAEVLVALEYLHMLG-----IIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXX 249
++ +AL+ H +++RDLKP NV + ++ L DF
Sbjct: 115 RVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFG------------- 161
Query: 250 XXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGT 309
L+R LN + + FV P
Sbjct: 162 ----------------------LARILN--------HDTSFAKAFVGTPY---------- 181
Query: 310 HEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNE 352
Y+SPE + S+ D W+ G +YE+ PF A S +
Sbjct: 182 --YMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK 222
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 89/230 (38%), Gaps = 63/230 (27%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASN------FSCIVMEFCSGGDLHSLRHKQPHKR-FSLT 191
E +I++ LDH + L F +S + +V+++ RH K+ +
Sbjct: 97 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 156
Query: 192 SARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXX 251
+ Y ++ +L Y+H GI +RD+KP+N+L+ D + L LC
Sbjct: 157 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV------LKLCD---------- 200
Query: 252 XXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE 311
FGS K +L EP + CS
Sbjct: 201 ----------------------------FGSAK-------QLVRGEPNVSXICS----RY 221
Query: 312 YVSPEVASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK 360
Y +PE+ G + + +++D W+ G + E++ G+ F S L I+K
Sbjct: 222 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 271
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/284 (20%), Positives = 100/284 (35%), Gaps = 65/284 (22%)
Query: 86 RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKKILKM 145
+RIG+G GTVY K+ D + + A R IL
Sbjct: 34 QRIGSGSFGTVY----KGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 89
Query: 146 LDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALE 205
+ + P L IV ++C G L+ H K F + A + ++
Sbjct: 90 MGYSTKPQL----------AIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMD 138
Query: 206 YLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYT 265
YLH II+RDLK N+ + D + + DF L+
Sbjct: 139 YLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEK------------------------ 174
Query: 266 RQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGN 325
+R+ GS + + L+ + L++A V + +
Sbjct: 175 -----------SRWSGSHQFEQLSGSILWMAPEVI---------------RMQDKNPYSF 208
Query: 326 AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQS 369
D +AFGI +YE++ G+ P++ +N + +V + P S
Sbjct: 209 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLS 252
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 79/221 (35%), Gaps = 54/221 (24%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E I+ DHP + L S IV E+ G L S K +F++
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFTVIQLVGMLR 154
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
+ ++YL +G ++RDL N+L+ S+ +SDF LS
Sbjct: 155 GIASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLS-------------------R 195
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
Y+TR + P R E +A R +
Sbjct: 196 VLEDDPEAAYTTRGGKI--------------PIRWTSPEAIAYRKFT------------- 228
Query: 319 SGGSHGNAVDWWAFGIFIYE-MIYGRTPFAAPSNETTLRNI 358
+A D W++GI ++E M YG P+ SN+ ++ +
Sbjct: 229 ------SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 46/107 (42%), Gaps = 6/107 (5%)
Query: 305 SFVGTHEYVSPEVASGGSH-GNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPL 363
S VGT Y++PEV + G D W+ G+ +Y M+ G PF P R + + L
Sbjct: 175 STVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRIL 234
Query: 364 TFPTQSPSSMS-EYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFF 409
P + R LIS + DP R+ +++ H +F
Sbjct: 235 NVQYAIPDYVHISPECRHLISRIFVADPAKRI----SIPEIRNHEWF 277
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 4/91 (4%)
Query: 136 AEMEKKIL--KMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSA 193
A ++++I+ + L HP + IVME+ SGG+L RFS A
Sbjct: 60 ANVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGEL--FERICNAGRFSEDEA 117
Query: 194 RFYAAEVLVALEYLHMLGIIYRDLKPENVLV 224
RF+ +++ + Y H + + +RDLK EN L+
Sbjct: 118 RFFFQQLISGVSYCHAMQVCHRDLKLENTLL 148
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/284 (20%), Positives = 100/284 (35%), Gaps = 65/284 (22%)
Query: 86 RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKKILKM 145
+RIG+G GTVY K+ D + + A R IL
Sbjct: 42 QRIGSGSFGTVY----KGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 97
Query: 146 LDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALE 205
+ + P L IV ++C G L+ H K F + A + ++
Sbjct: 98 MGYSTKPQL----------AIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMD 146
Query: 206 YLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYT 265
YLH II+RDLK N+ + D + + DF L+
Sbjct: 147 YLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEK------------------------ 182
Query: 266 RQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGN 325
+R+ GS + + L+ + L++A V + +
Sbjct: 183 -----------SRWSGSHQFEQLSGSILWMAPEVI---------------RMQDKNPYSF 216
Query: 326 AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQS 369
D +AFGI +YE++ G+ P++ +N + +V + P S
Sbjct: 217 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLS 260
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 89/230 (38%), Gaps = 63/230 (27%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASN------FSCIVMEFCSGGDLHSLRHKQPHKR-FSLT 191
E +I++ LDH + L F +S + +V+++ RH K+ +
Sbjct: 64 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 123
Query: 192 SARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXX 251
+ Y ++ +L Y+H GI +RD+KP+N+L+ D + L LC
Sbjct: 124 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV------LKLCD---------- 167
Query: 252 XXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE 311
FGS K +L EP + CS
Sbjct: 168 ----------------------------FGSAK-------QLVRGEPNVSXICS----RY 188
Query: 312 YVSPEVASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK 360
Y +PE+ G + + +++D W+ G + E++ G+ F S L I+K
Sbjct: 189 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 238
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 46/107 (42%), Gaps = 6/107 (5%)
Query: 305 SFVGTHEYVSPEVASGGSH-GNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPL 363
S VGT Y++PEV + G D W+ G+ +Y M+ G PF P R + + L
Sbjct: 175 SAVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRIL 234
Query: 364 TFPTQSPSSMS-EYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFF 409
P + R LIS + DP R+ +++ H +F
Sbjct: 235 NVQYAIPDYVHISPECRHLISRIFVADPAKRI----SIPEIRNHEWF 277
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 70/166 (42%), Gaps = 25/166 (15%)
Query: 82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMX--XXXXXXXXXXXXXHRAEME 139
++L + IGAG+ G L R + +E + + HR+
Sbjct: 21 YELVKDIGAGNFGVARLM------RDKQANELVAVKYIERGEKIDENVKREIINHRSLRH 74
Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAE 199
I++ + PT A IVME+ SGG+L RFS ARF+ +
Sbjct: 75 PNIVRFKEVILTPTHLA---------IVMEYASGGEL--FERICNAGRFSEDEARFFFQQ 123
Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDG----HIMLSDFDLSLCS 241
++ + Y H + + +RDLK EN L+ DG + ++DF S S
Sbjct: 124 LISGVSYAHAMQVAHRDLKLENTLL--DGSPAPRLKIADFGYSKAS 167
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 89/230 (38%), Gaps = 63/230 (27%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASN------FSCIVMEFCSGGDLHSLRHKQPHKR-FSLT 191
E +I++ LDH + L F +S + +V+++ RH K+ +
Sbjct: 71 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 130
Query: 192 SARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXX 251
+ Y ++ +L Y+H GI +RD+KP+N+L+ D + L LC
Sbjct: 131 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV------LKLCD---------- 174
Query: 252 XXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE 311
FGS K +L EP + CS
Sbjct: 175 ----------------------------FGSAK-------QLVRGEPNVSXICS----RY 195
Query: 312 YVSPEVASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK 360
Y +PE+ G + + +++D W+ G + E++ G+ F S L I+K
Sbjct: 196 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 245
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 54/109 (49%), Gaps = 8/109 (7%)
Query: 135 RAEMEKKILKMLDHPFLPTLYAEF----EASNFSCI-VMEFCSGGDLHSLRHKQPHKRFS 189
R E ++LK L H + L F +FS + ++ G DL+++ Q S
Sbjct: 73 RTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQA---LS 129
Query: 190 LTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+F ++L L+Y+H GII+RDLKP NV V D + + DF L+
Sbjct: 130 DEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLA 178
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 66/184 (35%), Gaps = 56/184 (30%)
Query: 175 DLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSD 234
DL + K P + + + L L++LH I++RDLKPEN+LV S G + L+D
Sbjct: 104 DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLAD 163
Query: 235 FDLSLCSNAIXXXXXXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLF 294
F L+ R YS +++ LTP
Sbjct: 164 FGLA---------------------------RIYSYQMA--------------LTP---- 178
Query: 295 VAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETT 354
V T Y +PEV ++ VD W+ G EM + F S
Sbjct: 179 -----------VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQ 227
Query: 355 LRNI 358
L I
Sbjct: 228 LGKI 231
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 79/221 (35%), Gaps = 54/221 (24%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E I+ DHP + L S IV E+ G L S K +F++
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFTVIQLVGMLR 154
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
+ ++YL +G ++RDL N+L+ S+ +SDF LS
Sbjct: 155 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS-------------------R 195
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
Y+TR + P R E +A R +
Sbjct: 196 VLEDDPEAAYTTRGGKI--------------PIRWTSPEAIAYRKFT------------- 228
Query: 319 SGGSHGNAVDWWAFGIFIYE-MIYGRTPFAAPSNETTLRNI 358
+A D W++GI ++E M YG P+ SN+ ++ +
Sbjct: 229 ------SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 79/221 (35%), Gaps = 54/221 (24%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E I+ DHP + L S IV E+ G L S K +F++
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFTVIQLVGMLR 154
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
+ ++YL +G ++RDL N+L+ S+ +SDF LS
Sbjct: 155 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS-------------------R 195
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
Y+TR + P R E +A R +
Sbjct: 196 VLEDDPEAAYTTRGGKI--------------PIRWTSPEAIAYRKFT------------- 228
Query: 319 SGGSHGNAVDWWAFGIFIYE-MIYGRTPFAAPSNETTLRNI 358
+A D W++GI ++E M YG P+ SN+ ++ +
Sbjct: 229 ------SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 79/221 (35%), Gaps = 54/221 (24%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E I+ DHP + L S IV E+ G L S K +F++
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFTVIQLVGMLR 154
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
+ ++YL +G ++RDL N+L+ S+ +SDF LS
Sbjct: 155 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS-------------------R 195
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
Y+TR + P R E +A R +
Sbjct: 196 VLEDDPEAAYTTRGGKI--------------PIRWTSPEAIAYRKFT------------- 228
Query: 319 SGGSHGNAVDWWAFGIFIYE-MIYGRTPFAAPSNETTLRNI 358
+A D W++GI ++E M YG P+ SN+ ++ +
Sbjct: 229 ------SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 79/221 (35%), Gaps = 54/221 (24%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E I+ DHP + L S IV E+ G L S K +F++
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFTVIQLVGMLR 154
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
+ ++YL +G ++RDL N+L+ S+ +SDF LS
Sbjct: 155 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS-------------------R 195
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
Y+TR + P R E +A R +
Sbjct: 196 VLEDDPEAAYTTRGGKI--------------PIRWTSPEAIAYRKFT------------- 228
Query: 319 SGGSHGNAVDWWAFGIFIYE-MIYGRTPFAAPSNETTLRNI 358
+A D W++GI ++E M YG P+ SN+ ++ +
Sbjct: 229 ------SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/284 (20%), Positives = 100/284 (35%), Gaps = 65/284 (22%)
Query: 86 RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKKILKM 145
+RIG+G GTVY K+ D + + A R IL
Sbjct: 14 QRIGSGSFGTVY----KGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 69
Query: 146 LDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALE 205
+ + P L IV ++C G L+ H K F + A + ++
Sbjct: 70 MGYSTKPQL----------AIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMD 118
Query: 206 YLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYT 265
YLH II+RDLK N+ + D + + DF L+
Sbjct: 119 YLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEK------------------------ 154
Query: 266 RQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGN 325
+R+ GS + + L+ + L++A V + +
Sbjct: 155 -----------SRWSGSHQFEQLSGSILWMAPEVI---------------RMQDKNPYSF 188
Query: 326 AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQS 369
D +AFGI +YE++ G+ P++ +N + +V + P S
Sbjct: 189 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLS 232
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 97/261 (37%), Gaps = 80/261 (30%)
Query: 166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVR 225
+VME C DL+S K+ K + Y +L A+ +H GI++ DLKP N L+
Sbjct: 133 MVME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI- 188
Query: 226 SDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKI 285
DG ML D + +
Sbjct: 189 VDG--MLKLIDFGIANQ------------------------------------------- 203
Query: 286 QTLTPNRLFVAEPVAARSCSFVGTHEYVSPE----VASGGSHGNAV-------DWWAFGI 334
+ P+ V + S VGT Y+ PE ++S +G + D W+ G
Sbjct: 204 --MQPDTTSVVKD------SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGC 255
Query: 335 FIYEMIYGRTPFAAPSNETTLRNIVKKP---LTFPTQSPSSMSEYHARDLISGLLNKDPC 391
+Y M YG+TPF N+ + + + P + FP + E +D++ L +DP
Sbjct: 256 ILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP-----DIPEKDLQDVLKCCLKRDPK 310
Query: 392 NRLGSKRGAA----DVKTHPF 408
R+ A ++THP
Sbjct: 311 QRISIPELLAHPYVQIQTHPV 331
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 79/221 (35%), Gaps = 54/221 (24%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E I+ DHP + L S IV E+ G L S K +F++
Sbjct: 94 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFTVIQLVGMLR 152
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
+ ++YL +G ++RDL N+L+ S+ +SDF LS
Sbjct: 153 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS-------------------R 193
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
Y+TR + P R E +A R +
Sbjct: 194 VLEDDPEAAYTTRGGKI--------------PIRWTSPEAIAYRKFT------------- 226
Query: 319 SGGSHGNAVDWWAFGIFIYE-MIYGRTPFAAPSNETTLRNI 358
+A D W++GI ++E M YG P+ SN+ ++ +
Sbjct: 227 ------SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 261
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 45/105 (42%), Gaps = 6/105 (5%)
Query: 307 VGTHEYVSPEVASGGSH-GNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTF 365
VGT Y++PEV + G D W+ G+ +Y M+ G PF P R + + L
Sbjct: 177 VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNV 236
Query: 366 PTQSPSSMS-EYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFF 409
P + R LIS + DP R+ +++ H +F
Sbjct: 237 QYAIPDYVHISPECRHLISRIFVADPAKRI----SIPEIRNHEWF 277
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 165 CIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLV 224
IVME+ SGG+L RFS ARF+ +++ + Y H + + +RDLK EN L+
Sbjct: 91 AIVMEYASGGEL--FERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLL 148
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 66/184 (35%), Gaps = 56/184 (30%)
Query: 175 DLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSD 234
DL + K P + + + L L++LH I++RDLKPEN+LV S G + L+D
Sbjct: 96 DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLAD 155
Query: 235 FDLSLCSNAIXXXXXXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLF 294
F L+ R YS +++ F
Sbjct: 156 FGLA---------------------------RIYSYQMALF------------------- 169
Query: 295 VAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETT 354
PV V T Y +PEV ++ VD W+ G EM + F S
Sbjct: 170 ---PV-------VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQ 219
Query: 355 LRNI 358
L I
Sbjct: 220 LGKI 223
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 100/273 (36%), Gaps = 80/273 (29%)
Query: 154 LYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGII 213
LY + +VME C DL+S K+ K + Y +L A+ +H GI+
Sbjct: 93 LYDYEITDQYIYMVME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQHGIV 149
Query: 214 YRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYTRQYSTRLS 273
+ DLKP N L+ DG ML D + +
Sbjct: 150 HSDLKPANFLI-VDG--MLKLIDFGIANQ------------------------------- 175
Query: 274 RFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE----VASGGSHGNAV-- 327
+ P+ V + S VGT Y+ PE ++S +G +
Sbjct: 176 --------------MQPDTTSVVKD------SQVGTVNYMPPEAIKDMSSSRENGKSKSK 215
Query: 328 -----DWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKP---LTFPTQSPSSMSEYHAR 379
D W+ G +Y M YG+TPF N+ + + + P + FP + E +
Sbjct: 216 ISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP-----DIPEKDLQ 270
Query: 380 DLISGLLNKDPCNRLGSKRGAA----DVKTHPF 408
D++ L +DP R+ A ++THP
Sbjct: 271 DVLKCCLKRDPKQRISIPELLAHPYVQIQTHPV 303
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 97/261 (37%), Gaps = 80/261 (30%)
Query: 166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVR 225
+VME C DL+S K+ K + Y +L A+ +H GI++ DLKP N L+
Sbjct: 86 MVME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI- 141
Query: 226 SDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKI 285
DG ML D + +
Sbjct: 142 VDG--MLKLIDFGIANQ------------------------------------------- 156
Query: 286 QTLTPNRLFVAEPVAARSCSFVGTHEYVSPE----VASGGSHGNAV-------DWWAFGI 334
+ P+ V + S VGT Y+ PE ++S +G + D W+ G
Sbjct: 157 --MQPDTTSVVKD------SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGC 208
Query: 335 FIYEMIYGRTPFAAPSNETTLRNIVKKP---LTFPTQSPSSMSEYHARDLISGLLNKDPC 391
+Y M YG+TPF N+ + + + P + FP + E +D++ L +DP
Sbjct: 209 ILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP-----DIPEKDLQDVLKCCLKRDPK 263
Query: 392 NRLGSKRGAA----DVKTHPF 408
R+ A ++THP
Sbjct: 264 QRISIPELLAHPYVQIQTHPV 284
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 77/225 (34%), Gaps = 58/225 (25%)
Query: 136 AEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARF 195
A E K+LK L H L L + +V EF L L + +
Sbjct: 71 AMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQK-- 128
Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXX 255
Y +++ + + H II+RD+KPEN+LV G + L DF + A
Sbjct: 129 YLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAA------------ 176
Query: 256 XXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSP 315
+ Y + +TR R +P
Sbjct: 177 ----PGEVYDDEVATRWYR---------------------------------------AP 193
Query: 316 EVASGG-SHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIV 359
E+ G +G AVD WA G + EM G F S+ L +I+
Sbjct: 194 ELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIM 238
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 97/261 (37%), Gaps = 80/261 (30%)
Query: 166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVR 225
+VME C DL+S K+ K + Y +L A+ +H GI++ DLKP N L+
Sbjct: 89 MVME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI- 144
Query: 226 SDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKI 285
DG ML D + +
Sbjct: 145 VDG--MLKLIDFGIANQ------------------------------------------- 159
Query: 286 QTLTPNRLFVAEPVAARSCSFVGTHEYVSPE----VASGGSHGNAV-------DWWAFGI 334
+ P+ V + S VGT Y+ PE ++S +G + D W+ G
Sbjct: 160 --MQPDTTSVVKD------SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGC 211
Query: 335 FIYEMIYGRTPFAAPSNETTLRNIVKKP---LTFPTQSPSSMSEYHARDLISGLLNKDPC 391
+Y M YG+TPF N+ + + + P + FP + E +D++ L +DP
Sbjct: 212 ILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP-----DIPEKDLQDVLKCCLKRDPK 266
Query: 392 NRLGSKRGAA----DVKTHPF 408
R+ A ++THP
Sbjct: 267 QRISIPELLAHPYVQIQTHPV 287
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 79/221 (35%), Gaps = 54/221 (24%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E I+ DHP + L S IV E+ G L S K +F++
Sbjct: 84 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFTVIQLVGMLR 142
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
+ ++YL +G ++RDL N+L+ S+ +SDF LS
Sbjct: 143 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS-------------------R 183
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
Y+TR + P R E +A R +
Sbjct: 184 VLEDDPEAAYTTRGGKI--------------PIRWTSPEAIAYRKFT------------- 216
Query: 319 SGGSHGNAVDWWAFGIFIYE-MIYGRTPFAAPSNETTLRNI 358
+A D W++GI ++E M YG P+ SN+ ++ +
Sbjct: 217 ------SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 251
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 102/283 (36%), Gaps = 55/283 (19%)
Query: 71 FGRKTGLTFRD-FDLHRRIGAGDIGTVYLCSL--NNKYRQDRGHEPCCLYAMXXXXXXXX 127
F K G+ + F + R++G G G V LC N KY YA+
Sbjct: 25 FSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKY-----------YAVKVVRNIKK 73
Query: 128 XXXXXXHRAEMEKKILKMLDHPFLPTLY-AEFEASNFSCIVMEFCSGGDLHSLRHKQPHK 186
A++ KKI + Y +F + C++ E G L+ + + +
Sbjct: 74 YTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFEPL-GPSLYEIITRNNYN 132
Query: 187 RFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSD--FDLSLCSNAI 244
F + + Y E+L AL YL + + + DLKPEN+L L D F+ SL +
Sbjct: 133 GFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENIL--------LDDPYFEKSLIT--- 181
Query: 245 XXXXXXXXXXXXXXXRSQTY-TRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARS 303
+ Q Y T+ +L F F S
Sbjct: 182 -------VRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSD------------------YH 216
Query: 304 CSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPF 346
S + T +Y +PEV + D W+FG + E+ G F
Sbjct: 217 GSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLF 259
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 165 CIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLV 224
+V E + D KQ ++ + RFY E+L AL+Y H +GI++RD+KP NVL+
Sbjct: 110 ALVFEHVNNTDF-----KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVLI 164
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 54/110 (49%), Gaps = 10/110 (9%)
Query: 135 RAEMEKKILKMLDHPFLPTLYAEFE----ASNFS--CIVMEFCSGGDLHSLRHKQPHKRF 188
RA E ++LK + H + L F +F+ +VM F G DL L H++
Sbjct: 70 RAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFM-GTDLGKL---MKHEKL 125
Query: 189 SLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+F ++L L Y+H GII+RDLKP N+ V D + + DF L+
Sbjct: 126 GEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLA 175
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Query: 307 VGTHEYVSPEVA-SGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTF 365
V T Y +PEV + + VD W+ G + EMI G+T F + L+ I+K T
Sbjct: 186 VVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTP 245
Query: 366 PTQSPSSMSEYHARDLISGL 385
P + + A++ + GL
Sbjct: 246 PAEFVQRLQSDEAKNYMKGL 265
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 67/167 (40%), Gaps = 59/167 (35%)
Query: 195 FYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXX 254
Y ++ A+ ++H LGI +RD+KP+N+LV S D L LC
Sbjct: 145 IYIYQLFRAVGFIHSLGICHRDIKPQNLLVNS------KDNTLKLCD------------- 185
Query: 255 XXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVS 314
FGS K +L +EP A CS Y +
Sbjct: 186 -------------------------FGSAK-------KLIPSEPSVAXICSRF----YRA 209
Query: 315 PEVASGGS-HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK 360
PE+ G + + ++D W+ G E+I G+ F S ET++ +V+
Sbjct: 210 PELMLGATEYTPSIDLWSIGCVFGELILGKPLF---SGETSIDQLVR 253
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 97/261 (37%), Gaps = 80/261 (30%)
Query: 166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVR 225
+VME C DL+S K+ K + Y +L A+ +H GI++ DLKP N L+
Sbjct: 133 MVME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI- 188
Query: 226 SDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKI 285
DG ML D + +
Sbjct: 189 VDG--MLKLIDFGIANQ------------------------------------------- 203
Query: 286 QTLTPNRLFVAEPVAARSCSFVGTHEYVSPE----VASGGSHGNAV-------DWWAFGI 334
+ P+ V + S VGT Y+ PE ++S +G + D W+ G
Sbjct: 204 --MQPDTTSVVKD------SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGC 255
Query: 335 FIYEMIYGRTPFAAPSNETTLRNIVKKP---LTFPTQSPSSMSEYHARDLISGLLNKDPC 391
+Y M YG+TPF N+ + + + P + FP + E +D++ L +DP
Sbjct: 256 ILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP-----DIPEKDLQDVLKCCLKRDPK 310
Query: 392 NRLGSKRGAA----DVKTHPF 408
R+ A ++THP
Sbjct: 311 QRISIPELLAHPYVQIQTHPV 331
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 79/221 (35%), Gaps = 54/221 (24%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E I+ DHP + L S IV E+ G L S K +F++
Sbjct: 67 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFTVIQLVGMLR 125
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
+ ++YL +G ++RDL N+L+ S+ +SDF LS
Sbjct: 126 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS-------------------R 166
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
Y+TR + P R E +A R +
Sbjct: 167 VLEDDPEAAYTTRGGKI--------------PIRWTSPEAIAYRKFT------------- 199
Query: 319 SGGSHGNAVDWWAFGIFIYE-MIYGRTPFAAPSNETTLRNI 358
+A D W++GI ++E M YG P+ SN+ ++ +
Sbjct: 200 ------SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 234
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 100/273 (36%), Gaps = 80/273 (29%)
Query: 154 LYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGII 213
LY + +VME C DL+S K+ K + Y +L A+ +H GI+
Sbjct: 73 LYDYEITDQYIYMVME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQHGIV 129
Query: 214 YRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYTRQYSTRLS 273
+ DLKP N L+ DG ML D + +
Sbjct: 130 HSDLKPANFLI-VDG--MLKLIDFGIANQ------------------------------- 155
Query: 274 RFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE----VASGGSHGNAV-- 327
+ P+ V + S VGT Y+ PE ++S +G +
Sbjct: 156 --------------MQPDTTSVVKD------SQVGTVNYMPPEAIKDMSSSRENGKSKSK 195
Query: 328 -----DWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKP---LTFPTQSPSSMSEYHAR 379
D W+ G +Y M YG+TPF N+ + + + P + FP + E +
Sbjct: 196 ISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP-----DIPEKDLQ 250
Query: 380 DLISGLLNKDPCNRLGSKRGAA----DVKTHPF 408
D++ L +DP R+ A ++THP
Sbjct: 251 DVLKCCLKRDPKQRISIPELLAHPYVQIQTHPV 283
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 54/109 (49%), Gaps = 8/109 (7%)
Query: 135 RAEMEKKILKMLDHPFLPTLYAEF----EASNFSCI-VMEFCSGGDLHSLRHKQPHKRFS 189
R E ++LK L H + L F +FS + ++ G DL+++ Q S
Sbjct: 65 RTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQA---LS 121
Query: 190 LTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+F ++L L+Y+H GII+RDLKP NV V D + + DF L+
Sbjct: 122 DEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLA 170
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 112/310 (36%), Gaps = 99/310 (31%)
Query: 139 EKKILKMLDHPFLPTL----------YAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRF 188
E KIL++L H + L Y +AS + +V +FC DL L K F
Sbjct: 67 EIKILQLLKHENVVNLIEICRTKASPYNRCKASIY--LVFDFCEH-DLAGLLSNVLVK-F 122
Query: 189 SLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXX 248
+L+ + +L L Y+H I++RD+K NVL+ DG + L+DF L
Sbjct: 123 TLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGL----------- 171
Query: 249 XXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVG 308
++ ++ +++ +R+ NR V
Sbjct: 172 ------------ARAFSLAKNSQPNRYXNR----------------------------VV 191
Query: 309 THEYVSPEVASGG-SHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKK------ 361
T Y PE+ G +G +D W G + EM + R+P + E ++ +
Sbjct: 192 TLWYRPPELLLGERDYGPPIDLWGAGCIMAEM-WTRSPIMQGNTEQHQLALISQLCGSIT 250
Query: 362 PLTFPTQSPSSMSEY----------------------HARDLISGLLNKDPCNRLGSKRG 399
P +P + E +A DLI LL DP R+ S
Sbjct: 251 PEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSD-- 308
Query: 400 AADVKTHPFF 409
D H FF
Sbjct: 309 --DALNHDFF 316
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%)
Query: 175 DLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSD 234
DL + K P + + + L L++LH I++RDLKPEN+LV S G + L+D
Sbjct: 96 DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLAD 155
Query: 235 FDLS 238
F L+
Sbjct: 156 FGLA 159
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%)
Query: 175 DLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSD 234
DL + K P + + + L L++LH I++RDLKPEN+LV S G + L+D
Sbjct: 96 DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLAD 155
Query: 235 FDLS 238
F L+
Sbjct: 156 FGLA 159
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 79/221 (35%), Gaps = 54/221 (24%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E I+ DHP + L S IV E+ G L S K +F++
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFTVIQLVGMLR 154
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
+ ++YL +G ++RDL N+L+ S+ +SDF L+
Sbjct: 155 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLA-------------------R 195
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
Y+TR + P R E +A R +
Sbjct: 196 VLEDDPEAAYTTRGGKI--------------PIRWTSPEAIAYRKFT------------- 228
Query: 319 SGGSHGNAVDWWAFGIFIYE-MIYGRTPFAAPSNETTLRNI 358
+A D W++GI ++E M YG P+ SN+ ++ +
Sbjct: 229 ------SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 112/317 (35%), Gaps = 102/317 (32%)
Query: 135 RAEMEKKILKMLDHPFLPTLYA-----EFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFS 189
R E KILK H + T++ FE N I+ E DLH + Q S
Sbjct: 55 RTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQT-DLHRVISTQ---MLS 110
Query: 190 LTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXX 249
+++ + L A++ LH +I+RDLKP N+L+ S+ + + DF
Sbjct: 111 DDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFG------------- 157
Query: 250 XXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARS--CSFV 307
L+R ++ +EP +S FV
Sbjct: 158 ----------------------LARIIDESAADN------------SEPTGQQSGMVEFV 183
Query: 308 GTHEYVSPEVA-SGGSHGNAVDWWAFGIFIYEMIYGRTPF----------------AAPS 350
T Y +PEV + + A+D W+ G + E+ R F P
Sbjct: 184 ATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPH 243
Query: 351 NETTLRNI--------VKK-------PL--TFPTQSPSSMSEYHARDLISGLLNKDPCNR 393
++ LR I +K PL FP +P + DL+ +L DP R
Sbjct: 244 SDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGI------DLLQRMLVFDPAKR 297
Query: 394 LGSKRGAADVKTHPFFK 410
+ +K HP+ +
Sbjct: 298 ITAKEALE----HPYLQ 310
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 58/105 (55%), Gaps = 9/105 (8%)
Query: 139 EKKILKMLDHPFLPTLYA--EFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFY 196
E ++LK L+H + L+A E + ++MEFC G L+++ ++P + L + F
Sbjct: 57 EFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVL-EEPSNAYGLPESEFL 115
Query: 197 AA--EVLVALEYLHMLGIIYRDLKPENVL--VRSDGHIM--LSDF 235
+V+ + +L GI++R++KP N++ + DG + L+DF
Sbjct: 116 IVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDF 160
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 165 CIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLV 224
+V E + D KQ ++ + RFY E+L AL+Y H +GI++RD+KP NV++
Sbjct: 110 ALVFEHVNNTDF-----KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 165 CIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLV 224
+V E + D KQ ++ + RFY E+L AL+Y H +GI++RD+KP NV++
Sbjct: 110 ALVFEHVNNTDF-----KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 165 CIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLV 224
+V E + D KQ ++ + RFY E+L AL+Y H +GI++RD+KP NV++
Sbjct: 110 ALVFEHVNNTDF-----KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 165 CIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLV 224
+V E + D KQ ++ + RFY E+L AL+Y H +GI++RD+KP NV++
Sbjct: 110 ALVFEHVNNTDF-----KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 165 CIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLV 224
+V E + D KQ ++ + RFY E+L AL+Y H +GI++RD+KP NV++
Sbjct: 110 ALVFEHVNNTDF-----KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 165 CIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLV 224
+V E + D KQ ++ + RFY E+L AL+Y H +GI++RD+KP NV++
Sbjct: 109 ALVFEHVNNTDF-----KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 163
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 165 CIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLV 224
+V E + D KQ ++ + RFY E+L AL+Y H +GI++RD+KP NV++
Sbjct: 110 ALVFEHVNNTDF-----KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 165 CIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLV 224
+V E + D KQ ++ + RFY E+L AL+Y H +GI++RD+KP NV++
Sbjct: 108 ALVFEHVNNTDF-----KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 162
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 165 CIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLV 224
+V E + D KQ ++ + RFY E+L AL+Y H +GI++RD+KP NV++
Sbjct: 109 ALVFEHVNNTDF-----KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 163
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 165 CIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLV 224
+V E + D KQ ++ + RFY E+L AL+Y H +GI++RD+KP NV++
Sbjct: 110 ALVFEHVNNTDF-----KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 165 CIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLV 224
+V E + D KQ ++ + RFY E+L AL+Y H +GI++RD+KP NV++
Sbjct: 115 ALVFEHVNNTDF-----KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 169
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 165 CIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLV 224
+V E + D KQ ++ + RFY E+L AL+Y H +GI++RD+KP NV++
Sbjct: 110 ALVFEHVNNTDF-----KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 165 CIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLV 224
+V E + D KQ ++ + RFY E+L AL+Y H +GI++RD+KP NV++
Sbjct: 110 ALVFEHVNNTDF-----KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 58/105 (55%), Gaps = 9/105 (8%)
Query: 139 EKKILKMLDHPFLPTLYA--EFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFY 196
E ++LK L+H + L+A E + ++MEFC G L+++ ++P + L + F
Sbjct: 57 EFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVL-EEPSNAYGLPESEFL 115
Query: 197 AA--EVLVALEYLHMLGIIYRDLKPENVL--VRSDGHIM--LSDF 235
+V+ + +L GI++R++KP N++ + DG + L+DF
Sbjct: 116 IVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDF 160
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 78/221 (35%), Gaps = 54/221 (24%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E I+ DHP + L S IV E G L S K +F++
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKH-DAQFTVIQLVGMLR 154
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
+ ++YL +G ++RDL N+L+ S+ +SDF LS
Sbjct: 155 GIASGMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLS-------------------R 195
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
Y+TR + P R E +A R +
Sbjct: 196 VLEDDPEAAYTTRGGKI--------------PIRWTSPEAIAYRKFT------------- 228
Query: 319 SGGSHGNAVDWWAFGIFIYE-MIYGRTPFAAPSNETTLRNI 358
+A D W++GI ++E M YG P+ SN+ ++ +
Sbjct: 229 ------SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 5/60 (8%)
Query: 165 CIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLV 224
+V E + D LR + + RFY E+L AL+Y H +GI++RD+KP NV++
Sbjct: 110 ALVFEHVNNTDFKQLR-----QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 78/221 (35%), Gaps = 54/221 (24%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E I+ DHP + L S IV E+ G L S K +F++
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFTVIQLVGMLR 154
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
+ ++YL +G ++RDL N+L+ S+ +SDF L
Sbjct: 155 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLG-------------------R 195
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
Y+TR + P R E +A R +
Sbjct: 196 VLEDDPEAAYTTRGGKI--------------PIRWTSPEAIAYRKFT------------- 228
Query: 319 SGGSHGNAVDWWAFGIFIYE-MIYGRTPFAAPSNETTLRNI 358
+A D W++GI ++E M YG P+ SN+ ++ +
Sbjct: 229 ------SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%)
Query: 175 DLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSD 234
DL + K P + + ++L L++LH +++RDLKP+N+LV S G I L+D
Sbjct: 104 DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLAD 163
Query: 235 FDLS 238
F L+
Sbjct: 164 FGLA 167
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 64/169 (37%), Gaps = 33/169 (19%)
Query: 274 RFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSF-------VGTHEYVSPEVASGGSHGNA 326
R ++R + I + ++ +A+ AR SF V T Y +PEV S+
Sbjct: 140 RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATP 199
Query: 327 VDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK-----------KPLTFPTQSPSSMS- 374
VD W+ G EM + F S+ L I+ + + P Q+ S S
Sbjct: 200 VDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSA 259
Query: 375 ----------EYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLN 413
+ +DL+ L +P R+ A +HP+F+ L
Sbjct: 260 QPIEKFVTDIDELGKDLLLKCLTFNPAKRI----SAYSALSHPYFQDLE 304
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%)
Query: 175 DLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSD 234
DL + K P + + ++L L++LH +++RDLKP+N+LV S G I L+D
Sbjct: 104 DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLAD 163
Query: 235 FDLS 238
F L+
Sbjct: 164 FGLA 167
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 63/166 (37%), Gaps = 33/166 (19%)
Query: 274 RFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSF-------VGTHEYVSPEVASGGSHGNA 326
R ++R + I + ++ +A+ AR SF V T Y +PEV S+
Sbjct: 140 RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATP 199
Query: 327 VDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK-----------KPLTFPTQSPSSMS- 374
VD W+ G EM + F S+ L I+ + + P Q+ S S
Sbjct: 200 VDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSA 259
Query: 375 ----------EYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
+ +DL+ L +P R+ A +HP+F+
Sbjct: 260 QPIEKFVTDIDELGKDLLLKCLTFNPAKRI----SAYSALSHPYFQ 301
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 63/299 (21%), Positives = 99/299 (33%), Gaps = 85/299 (28%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E +LK L H + TL+ +V E+ L ++ + + +
Sbjct: 50 EVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDKDLKQYL--DDCGNIINMHNVKLFLF 107
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
++L L Y H +++RDLKP+N+L+ G + L+DF L+ +
Sbjct: 108 QLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSI--------------- 152
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
++TY + T R + GS T
Sbjct: 153 -PTKTYDNEVVTLWYRPPDILLGSTDYST------------------------------- 180
Query: 319 SGGSHGNAVDWWAFGIFIYEMIYGRTPF----------------AAPSNET---TLRNIV 359
+D W G YEM GR F P+ ET L N
Sbjct: 181 -------QIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEE 233
Query: 360 KKPLTFPTQSPSSMSEYHAR------DLISGLLNKDPCNRLGSKRGAADVKTHPFFKGL 412
K +P ++ + R DL++ LL + NR+ A D HPFF L
Sbjct: 234 FKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRI----SAEDAMKHPFFLSL 288
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%)
Query: 175 DLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSD 234
DL + K P + + ++L L++LH +++RDLKP+N+LV S G I L+D
Sbjct: 104 DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLAD 163
Query: 235 FDLS 238
F L+
Sbjct: 164 FGLA 167
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 64/169 (37%), Gaps = 33/169 (19%)
Query: 274 RFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSF-------VGTHEYVSPEVASGGSHGNA 326
R ++R + I + ++ +A+ AR SF V T Y +PEV S+
Sbjct: 140 RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATP 199
Query: 327 VDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK-----------KPLTFPTQSPSSMS- 374
VD W+ G EM + F S+ L I+ + + P Q+ S S
Sbjct: 200 VDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSA 259
Query: 375 ----------EYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLN 413
+ +DL+ L +P R+ A +HP+F+ L
Sbjct: 260 QPIEKFVTDIDELGKDLLLKCLTFNPAKRI----SAYSALSHPYFQDLE 304
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 113/308 (36%), Gaps = 95/308 (30%)
Query: 139 EKKILKMLDHPFLPTLY--AEFEASNFS-C-----IVMEFCSGGDLHSLRHKQPHKRFSL 190
E KIL++L H + L +AS ++ C +V +FC DL L K F+L
Sbjct: 67 EIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVK-FTL 124
Query: 191 TSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXX 250
+ + +L L Y+H I++RD+K NVL+ DG + L+DF L
Sbjct: 125 SEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGL------------- 171
Query: 251 XXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTH 310
++ ++ +++ +R+ NR V T
Sbjct: 172 ----------ARAFSLAKNSQPNRYXNR----------------------------VVTL 193
Query: 311 EYVSPEVASGG-SHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKK------PL 363
Y PE+ G +G +D W G + EM + R+P + E ++ + P
Sbjct: 194 WYRPPELLLGERDYGPPIDLWGAGCIMAEM-WTRSPIMQGNTEQHQLALISQLCGSITPE 252
Query: 364 TFPTQSPSSMSEY----------------------HARDLISGLLNKDPCNRLGSKRGAA 401
+P + E +A DLI LL DP R+ S
Sbjct: 253 VWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSD---- 308
Query: 402 DVKTHPFF 409
D H FF
Sbjct: 309 DALNHDFF 316
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 78/221 (35%), Gaps = 54/221 (24%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E I+ DHP + L S IV E G L S K +F++
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKH-DAQFTVIQLVGMLR 154
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
+ ++YL +G ++RDL N+L+ S+ +SDF LS
Sbjct: 155 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS-------------------R 195
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
Y+TR + P R E +A R +
Sbjct: 196 VLEDDPEAAYTTRGGKI--------------PIRWTSPEAIAYRKFT------------- 228
Query: 319 SGGSHGNAVDWWAFGIFIYE-MIYGRTPFAAPSNETTLRNI 358
+A D W++GI ++E M YG P+ SN+ ++ +
Sbjct: 229 ------SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 113/308 (36%), Gaps = 95/308 (30%)
Query: 139 EKKILKMLDHPFLPTLY--AEFEASNFS-C-----IVMEFCSGGDLHSLRHKQPHKRFSL 190
E KIL++L H + L +AS ++ C +V +FC DL L K F+L
Sbjct: 67 EIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVK-FTL 124
Query: 191 TSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXX 250
+ + +L L Y+H I++RD+K NVL+ DG + L+DF L
Sbjct: 125 SEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGL------------- 171
Query: 251 XXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTH 310
++ ++ +++ +R+ NR V T
Sbjct: 172 ----------ARAFSLAKNSQPNRYXNR----------------------------VVTL 193
Query: 311 EYVSPEVASGG-SHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKK------PL 363
Y PE+ G +G +D W G + EM + R+P + E ++ + P
Sbjct: 194 WYRPPELLLGERDYGPPIDLWGAGCIMAEM-WTRSPIMQGNTEQHQLALISQLCGSITPE 252
Query: 364 TFPTQSPSSMSEY----------------------HARDLISGLLNKDPCNRLGSKRGAA 401
+P + E +A DLI LL DP R+ S
Sbjct: 253 VWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSD---- 308
Query: 402 DVKTHPFF 409
D H FF
Sbjct: 309 DALNHDFF 316
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 113/308 (36%), Gaps = 95/308 (30%)
Query: 139 EKKILKMLDHPFLPTLY--AEFEASNFS-C-----IVMEFCSGGDLHSLRHKQPHKRFSL 190
E KIL++L H + L +AS ++ C +V +FC DL L K F+L
Sbjct: 66 EIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVK-FTL 123
Query: 191 TSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXX 250
+ + +L L Y+H I++RD+K NVL+ DG + L+DF L
Sbjct: 124 SEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGL------------- 170
Query: 251 XXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTH 310
++ ++ +++ +R+ NR V T
Sbjct: 171 ----------ARAFSLAKNSQPNRYXNR----------------------------VVTL 192
Query: 311 EYVSPEVASGG-SHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKK------PL 363
Y PE+ G +G +D W G + EM + R+P + E ++ + P
Sbjct: 193 WYRPPELLLGERDYGPPIDLWGAGCIMAEM-WTRSPIMQGNTEQHQLALISQLCGSITPE 251
Query: 364 TFPTQSPSSMSEY----------------------HARDLISGLLNKDPCNRLGSKRGAA 401
+P + E +A DLI LL DP R+ S
Sbjct: 252 VWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSD---- 307
Query: 402 DVKTHPFF 409
D H FF
Sbjct: 308 DALNHDFF 315
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 81/221 (36%), Gaps = 54/221 (24%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E I+ DHP + L S IV E+ G L + K +F++
Sbjct: 73 EASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKN-DGQFTVIQLVGMLR 131
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
+ ++YL +G ++RDL N+L+ S+ +SDF LS
Sbjct: 132 GISAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS-------------------R 172
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
Y+TR G K P R E +A R +
Sbjct: 173 VLEDDPEAAYTTR---------GGK-----IPIRWTAPEAIAFRKFT------------- 205
Query: 319 SGGSHGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTLRNI 358
+A D W++GI ++E++ YG P+ +N+ ++ +
Sbjct: 206 ------SASDVWSYGIVMWEVVSYGERPYWEMTNQDVIKAV 240
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 43/100 (43%), Gaps = 1/100 (1%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E I+ DHP + L + IV E+ G L + +F++
Sbjct: 100 EASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTH-DGQFTIMQLVGMLR 158
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
V + YL LG ++RDL NVLV S+ +SDF LS
Sbjct: 159 GVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLS 198
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 53/109 (48%), Gaps = 9/109 (8%)
Query: 135 RAEMEKKILKMLDHPFLPTLYA-----EFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFS 189
R E KILK H + T++ FE N I+ E DLH + Q S
Sbjct: 55 RTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQT-DLHRVISTQ---MLS 110
Query: 190 LTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+++ + L A++ LH +I+RDLKP N+L+ S+ + + DF L+
Sbjct: 111 DDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLA 159
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 78/221 (35%), Gaps = 56/221 (25%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E +++ L HP L LY C+V EF G L Q F+ +
Sbjct: 52 EAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQ-RGLFAAETLLGMCL 110
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
+V + YL +I+RDL N LV + I +SDF
Sbjct: 111 DVCEGMAYLEEASVIHRDLAARNCLVGENQVIKVSDFG---------------------- 148
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
+ RF + + T + PV ++ SPEV
Sbjct: 149 -----------------MTRFVLDDQYTSSTGTKF----PV-----------KWASPEVF 176
Query: 319 SGGSHGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTLRNI 358
S + + D W+FG+ ++E+ G+ P+ SN + +I
Sbjct: 177 SFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 217
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 43/100 (43%), Gaps = 1/100 (1%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E I+ DHP + L + IV E+ G L + +F++
Sbjct: 100 EASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTH-DGQFTIMQLVGMLR 158
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
V + YL LG ++RDL NVLV S+ +SDF LS
Sbjct: 159 GVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLS 198
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 53/109 (48%), Gaps = 9/109 (8%)
Query: 135 RAEMEKKILKMLDHPFLPTLYA-----EFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFS 189
R E KILK H + T++ FE N I+ E DLH + Q S
Sbjct: 55 RTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQT-DLHRVISTQ---MLS 110
Query: 190 LTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+++ + L A++ LH +I+RDLKP N+L+ S+ + + DF L+
Sbjct: 111 DDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLA 159
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 78/221 (35%), Gaps = 54/221 (24%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E I+ DHP + L S IV E G L S K +F++
Sbjct: 67 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKH-DAQFTVIQLVGMLR 125
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
+ ++YL +G ++RDL N+L+ S+ +SDF LS
Sbjct: 126 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS-------------------R 166
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
Y+TR + P R E +A R +
Sbjct: 167 VLEDDPEAAYTTRGGKI--------------PIRWTSPEAIAYRKFT------------- 199
Query: 319 SGGSHGNAVDWWAFGIFIYE-MIYGRTPFAAPSNETTLRNI 358
+A D W++GI ++E M YG P+ SN+ ++ +
Sbjct: 200 ------SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 234
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 74/204 (36%), Gaps = 63/204 (30%)
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEF-CSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
ILK+LDH + N +VM F G +L +L K H+ L + + ++
Sbjct: 88 ILKLLDH-------FNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQL 140
Query: 201 LVALEYLHM-LGIIYRDLKPENVLVR-SDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
L+ L+Y+H GII+ D+KPENVL+ D L ++ NA
Sbjct: 141 LLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWY------------ 188
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
+ YT TR EY SPEV
Sbjct: 189 --DEHYTNSIQTR---------------------------------------EYRSPEVL 207
Query: 319 SGGSHGNAVDWWAFGIFIYEMIYG 342
G G D W+ I+E+I G
Sbjct: 208 LGAPWGCGADIWSTACLIFELITG 231
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLV- 224
IVME GG+L S + + F+ A + A++YLH + I +RD+KPEN+L
Sbjct: 106 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYT 165
Query: 225 --RSDGHIMLSDFDLS 238
R + + L+DF +
Sbjct: 166 SKRPNAILKLTDFGFA 181
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 11/90 (12%)
Query: 312 YVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPF-------AAPSNETTLRNIVKKPLT 364
YV+PEV + + D W+ G+ +Y ++ G PF +P +T +R
Sbjct: 199 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR---MGQYE 255
Query: 365 FPTQSPSSMSEYHARDLISGLLNKDPCNRL 394
FP S +SE + LI LL +P R+
Sbjct: 256 FPNPEWSEVSE-EVKMLIRNLLKTEPTQRM 284
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLV- 224
IVME GG+L S + + F+ A + A++YLH + I +RD+KPEN+L
Sbjct: 96 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYT 155
Query: 225 --RSDGHIMLSDF 235
R + + L+DF
Sbjct: 156 SKRPNAILKLTDF 168
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 52/122 (42%), Gaps = 22/122 (18%)
Query: 312 YVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPF-------AAPSNETTLRNIVKKPLT 364
YV+PEV + + D W+ G+ +Y ++ G PF +P +T +R
Sbjct: 189 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR---MGQYE 245
Query: 365 FPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPE 424
FP S +SE + LI LL +P R+ + HP+ +++S P+
Sbjct: 246 FPNPEWSEVSE-EVKMLIRNLLKTEPTQRM----TITEFMNHPW-------IMQSTKVPQ 293
Query: 425 IP 426
P
Sbjct: 294 TP 295
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 68/184 (36%), Gaps = 35/184 (19%)
Query: 70 TFGRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXX 129
T ++ G+ F++ +L IG+G G V+ K+R D
Sbjct: 4 TVDKRFGMDFKEIEL---IGSGGFGQVF----KAKHRID------------GKTYVIKRV 44
Query: 130 XXXXHRAEMEKKILKMLDHPFL--------------PTLYAEFEASNFSC--IVMEFCSG 173
+AE E K L LDH + T S C I MEFC
Sbjct: 45 KYNNEKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDK 104
Query: 174 GDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLS 233
G L K+ ++ A ++ ++Y+H +I RDLKP N+ + + +
Sbjct: 105 GTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIG 164
Query: 234 DFDL 237
DF L
Sbjct: 165 DFGL 168
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 74/204 (36%), Gaps = 63/204 (30%)
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEF-CSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
ILK+LDH + N +VM F G +L +L K H+ L + + ++
Sbjct: 88 ILKLLDH-------FNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQL 140
Query: 201 LVALEYLHM-LGIIYRDLKPENVLVR-SDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
L+ L+Y+H GII+ D+KPENVL+ D L ++ NA
Sbjct: 141 LLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWY------------ 188
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
+ YT TR EY SPEV
Sbjct: 189 --DEHYTNSIQTR---------------------------------------EYRSPEVL 207
Query: 319 SGGSHGNAVDWWAFGIFIYEMIYG 342
G G D W+ I+E+I G
Sbjct: 208 LGAPWGCGADIWSTACLIFELITG 231
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLV- 224
IVME GG+L S + + F+ A + A++YLH + I +RD+KPEN+L
Sbjct: 98 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYT 157
Query: 225 --RSDGHIMLSDF 235
R + + L+DF
Sbjct: 158 SKRPNAILKLTDF 170
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 52/122 (42%), Gaps = 22/122 (18%)
Query: 312 YVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPF-------AAPSNETTLRNIVKKPLT 364
YV+PEV + + D W+ G+ +Y ++ G PF +P +T +R
Sbjct: 191 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR---MGQYE 247
Query: 365 FPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPE 424
FP S +SE + LI LL +P R+ + HP+ +++S P+
Sbjct: 248 FPNPEWSEVSE-EVKMLIRNLLKTEPTQRM----TITEFMNHPW-------IMQSTKVPQ 295
Query: 425 IP 426
P
Sbjct: 296 TP 297
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 104/302 (34%), Gaps = 90/302 (29%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E ILK L H + LY +V E DL L S+T A+ +
Sbjct: 50 EISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVT-AKSFLL 107
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
++L + Y H +++RDLKP+N+L+ +G + ++DF L+
Sbjct: 108 QLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLA-------------------- 147
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
R FG P R + E V T Y +P+V
Sbjct: 148 -------------------RAFG-------IPVRKYTHEVV---------TLWYRAPDVL 172
Query: 319 SGG-SHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNI------------------- 358
G + +D W+ G EM+ G F S L I
Sbjct: 173 MGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELP 232
Query: 359 -------VKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG 411
V +PL P +S + DL+S +L DP R+ +K+ H +FK
Sbjct: 233 KYDPNFTVYEPL--PWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE----HAYFKE 286
Query: 412 LN 413
N
Sbjct: 287 NN 288
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 87/239 (36%), Gaps = 55/239 (23%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E I+ DHP + L IV+EF G L + K +F++
Sbjct: 94 EASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKH-DGQFTVIQLVGMLR 152
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
+ + YL +G ++RDL N+LV S+ +SDF
Sbjct: 153 GIAAGMRYLADMGYVHRDLAARNILVNSNLVCKVSDFG---------------------- 190
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
LSR + + + T T ++ PV + +PE
Sbjct: 191 -------------LSRVIED--DPEAVYTTTGGKI----PV-----------RWTAPEAI 220
Query: 319 SGGSHGNAVDWWAFGIFIYE-MIYGRTPFAAPSNETTLRNIVKK-PLTFPTQSPSSMSE 375
+A D W++GI ++E M YG P+ SN+ ++ I + L P P+ + +
Sbjct: 221 QYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPAPMDCPAGLHQ 279
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLV- 224
IVME GG+L S + + F+ A + A++YLH + I +RD+KPEN+L
Sbjct: 136 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYT 195
Query: 225 --RSDGHIMLSDF 235
R + + L+DF
Sbjct: 196 SKRPNAILKLTDF 208
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 52/122 (42%), Gaps = 22/122 (18%)
Query: 312 YVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPF-------AAPSNETTLRNIVKKPLT 364
YV+PEV + + D W+ G+ +Y ++ G PF +P +T +R
Sbjct: 229 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR---MGQYE 285
Query: 365 FPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPE 424
FP S +SE + LI LL +P R+ + HP+ +++S P+
Sbjct: 286 FPNPEWSEVSE-EVKMLIRNLLKTEPTQRM----TITEFMNHPW-------IMQSTKVPQ 333
Query: 425 IP 426
P
Sbjct: 334 TP 335
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLV- 224
IVME GG+L S + + F+ A + A++YLH + I +RD+KPEN+L
Sbjct: 97 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYT 156
Query: 225 --RSDGHIMLSDF 235
R + + L+DF
Sbjct: 157 SKRPNAILKLTDF 169
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 52/122 (42%), Gaps = 22/122 (18%)
Query: 312 YVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPF-------AAPSNETTLRNIVKKPLT 364
YV+PEV + + D W+ G+ +Y ++ G PF +P +T +R
Sbjct: 190 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR---MGQYE 246
Query: 365 FPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPE 424
FP S +SE + LI LL +P R+ + HP+ +++S P+
Sbjct: 247 FPNPEWSEVSE-EVKMLIRNLLKTEPTQRM----TITEFMNHPW-------IMQSTKVPQ 294
Query: 425 IP 426
P
Sbjct: 295 TP 296
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 2/107 (1%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E + K+ +HP + A F A N +V F + G L + + +
Sbjct: 60 ELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQ 119
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDF--DLSLCSNA 243
VL AL+Y+H +G ++R +K ++L+ DG + LS +LS+ S+
Sbjct: 120 GVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHG 166
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLV- 224
IVME GG+L S + + F+ A + A++YLH + I +RD+KPEN+L
Sbjct: 91 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYT 150
Query: 225 --RSDGHIMLSDF 235
R + + L+DF
Sbjct: 151 SKRPNAILKLTDF 163
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 11/90 (12%)
Query: 312 YVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPF-------AAPSNETTLRNIVKKPLT 364
YV+PEV + + D W+ G+ +Y ++ G PF +P +T +R
Sbjct: 184 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR---MGQYE 240
Query: 365 FPTQSPSSMSEYHARDLISGLLNKDPCNRL 394
FP S +SE + LI LL +P R+
Sbjct: 241 FPNPEWSEVSE-EVKMLIRNLLKTEPTQRM 269
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLV- 224
IVME GG+L S + + F+ A + A++YLH + I +RD+KPEN+L
Sbjct: 92 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYT 151
Query: 225 --RSDGHIMLSDF 235
R + + L+DF
Sbjct: 152 SKRPNAILKLTDF 164
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 52/122 (42%), Gaps = 22/122 (18%)
Query: 312 YVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPF-------AAPSNETTLRNIVKKPLT 364
YV+PEV + + D W+ G+ +Y ++ G PF +P +T +R
Sbjct: 185 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR---MGQYE 241
Query: 365 FPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPE 424
FP S +SE + LI LL +P R+ + HP+ +++S P+
Sbjct: 242 FPNPEWSEVSE-EVKMLIRNLLKTEPTQRM----TITEFMNHPW-------IMQSTKVPQ 289
Query: 425 IP 426
P
Sbjct: 290 TP 291
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 2/107 (1%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E + K+ +HP + A F A N +V F + G L + + +
Sbjct: 76 ELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQ 135
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDF--DLSLCSNA 243
VL AL+Y+H +G ++R +K ++L+ DG + LS +LS+ S+
Sbjct: 136 GVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHG 182
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 104/302 (34%), Gaps = 90/302 (29%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E ILK L H + LY +V E DL L S+T A+ +
Sbjct: 50 EISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVT-AKSFLL 107
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
++L + Y H +++RDLKP+N+L+ +G + ++DF L+
Sbjct: 108 QLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLA-------------------- 147
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
R FG P R + E V T Y +P+V
Sbjct: 148 -------------------RAFG-------IPVRKYTHEIV---------TLWYRAPDVL 172
Query: 319 SGG-SHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNI------------------- 358
G + +D W+ G EM+ G F S L I
Sbjct: 173 MGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELP 232
Query: 359 -------VKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG 411
V +PL P +S + DL+S +L DP R+ +K+ H +FK
Sbjct: 233 KYDPNFTVYEPL--PWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE----HAYFKE 286
Query: 412 LN 413
N
Sbjct: 287 NN 288
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLV- 224
IVME GG+L S + + F+ A + A++YLH + I +RD+KPEN+L
Sbjct: 90 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYT 149
Query: 225 --RSDGHIMLSDF 235
R + + L+DF
Sbjct: 150 SKRPNAILKLTDF 162
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 11/90 (12%)
Query: 312 YVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPF-------AAPSNETTLRNIVKKPLT 364
YV+PEV + + D W+ G+ +Y ++ G PF +P +T +R
Sbjct: 183 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR---MGQYE 239
Query: 365 FPTQSPSSMSEYHARDLISGLLNKDPCNRL 394
FP S +SE + LI LL +P R+
Sbjct: 240 FPNPEWSEVSE-EVKMLIRNLLKTEPTQRM 268
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 96/261 (36%), Gaps = 80/261 (30%)
Query: 166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVR 225
+VME C DL+S K+ K + Y +L A+ +H GI++ DLKP N L+
Sbjct: 133 MVME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI- 188
Query: 226 SDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKI 285
DG ML D + +
Sbjct: 189 VDG--MLKLIDFGIANQ------------------------------------------- 203
Query: 286 QTLTPNRLFVAEPVAARSCSFVGTHEYVSPE----VASGGSHGNAV-------DWWAFGI 334
+ P+ V + S VG Y+ PE ++S +G + D W+ G
Sbjct: 204 --MQPDTTSVVKD------SQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGC 255
Query: 335 FIYEMIYGRTPFAAPSNETTLRNIVKKP---LTFPTQSPSSMSEYHARDLISGLLNKDPC 391
+Y M YG+TPF N+ + + + P + FP + E +D++ L +DP
Sbjct: 256 ILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP-----DIPEKDLQDVLKCCLKRDPK 310
Query: 392 NRLGSKRGAA----DVKTHPF 408
R+ A ++THP
Sbjct: 311 QRISIPELLAHPYVQIQTHPV 331
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLV- 224
IVME GG+L S + + F+ A + A++YLH + I +RD+KPEN+L
Sbjct: 142 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYT 201
Query: 225 --RSDGHIMLSDF 235
R + + L+DF
Sbjct: 202 SKRPNAILKLTDF 214
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 52/122 (42%), Gaps = 22/122 (18%)
Query: 312 YVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPF-------AAPSNETTLRNIVKKPLT 364
YV+PEV + + D W+ G+ +Y ++ G PF +P +T +R
Sbjct: 235 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR---MGQYE 291
Query: 365 FPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPE 424
FP S +SE + LI LL +P R+ + HP+ +++S P+
Sbjct: 292 FPNPEWSEVSE-EVKMLIRNLLKTEPTQRM----TITEFMNHPW-------IMQSTKVPQ 339
Query: 425 IP 426
P
Sbjct: 340 TP 341
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLV- 224
IVME GG+L S + + F+ A + A++YLH + I +RD+KPEN+L
Sbjct: 92 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYT 151
Query: 225 --RSDGHIMLSDF 235
R + + L+DF
Sbjct: 152 SKRPNAILKLTDF 164
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 48/116 (41%), Gaps = 22/116 (18%)
Query: 318 ASGGSHGNAVDWWAFGIFIYEMIYGRTPF-------AAPSNETTLRNIVKKPLTFPTQSP 370
+G + + D W+ G+ +Y ++ G PF +P +T +R FP
Sbjct: 170 TTGEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR---MGQYEFPNPEW 226
Query: 371 SSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTPPEIP 426
S +SE + LI LL +P R+ + HP+ +++S P+ P
Sbjct: 227 SEVSE-EVKMLIRNLLKTEPTQRM----TITEFMNHPW-------IMQSTKVPQTP 270
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLV- 224
IVME GG+L S + + F+ A + A++YLH + I +RD+KPEN+L
Sbjct: 92 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYT 151
Query: 225 --RSDGHIMLSDF 235
R + + L+DF
Sbjct: 152 SKRPNAILKLTDF 164
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 11/90 (12%)
Query: 312 YVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPF-------AAPSNETTLRNIVKKPLT 364
YV+PEV + + D W+ G+ +Y ++ G PF +P +T +R
Sbjct: 185 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR---MGQYE 241
Query: 365 FPTQSPSSMSEYHARDLISGLLNKDPCNRL 394
FP S +SE + LI LL +P R+
Sbjct: 242 FPNPEWSEVSE-EVKMLIRNLLKTEPTQRM 270
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Query: 306 FVGTHEYVSPEVASGGSHGN-AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT 364
+V T Y +PE+ H N VD W+ G + E++ GRT F + L+ I++ T
Sbjct: 211 YVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGT 270
Query: 365 FPTQSPSSMSEYHARDLISGL 385
P S M + AR+ I+ L
Sbjct: 271 PPASVISRMPSHEARNYINSL 291
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
G DL+++ Q + + +F ++L L+Y+H II+RDLKP N+ V D + +
Sbjct: 139 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 195
Query: 233 SDFDLS 238
DF L+
Sbjct: 196 LDFGLA 201
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 104/302 (34%), Gaps = 90/302 (29%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E ILK L H + LY +V E DL L S+T A+ +
Sbjct: 50 EISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVT-AKSFLL 107
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
++L + Y H +++RDLKP+N+L+ +G + ++DF L+
Sbjct: 108 QLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLA-------------------- 147
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
R FG P R + E V T Y +P+V
Sbjct: 148 -------------------RAFG-------IPVRKYTHEVV---------TLWYRAPDVL 172
Query: 319 SGG-SHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNI------------------- 358
G + +D W+ G EM+ G F S L I
Sbjct: 173 MGSKKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELP 232
Query: 359 -------VKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKG 411
V +PL P +S + DL+S +L DP R+ +K+ H +FK
Sbjct: 233 KYDPNFTVYEPL--PWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE----HAYFKE 286
Query: 412 LN 413
N
Sbjct: 287 NN 288
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 78/221 (35%), Gaps = 56/221 (25%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E +++ L HP L LY C+V EF G L Q F+ +
Sbjct: 72 EAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQ-RGLFAAETLLGMCL 130
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
+V + YL +I+RDL N LV + I +SDF
Sbjct: 131 DVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFG---------------------- 168
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
+ RF + + T + PV ++ SPEV
Sbjct: 169 -----------------MTRFVLDDQYTSSTGTKF----PV-----------KWASPEVF 196
Query: 319 SGGSHGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTLRNI 358
S + + D W+FG+ ++E+ G+ P+ SN + +I
Sbjct: 197 SFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 237
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 78/221 (35%), Gaps = 56/221 (25%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E +++ L HP L LY C+V EF G L Q F+ +
Sbjct: 52 EAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQ-RGLFAAETLLGMCL 110
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
+V + YL +I+RDL N LV + I +SDF
Sbjct: 111 DVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFG---------------------- 148
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
+ RF + + T + PV ++ SPEV
Sbjct: 149 -----------------MTRFVLDDQYTSSTGTKF----PV-----------KWASPEVF 176
Query: 319 SGGSHGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTLRNI 358
S + + D W+FG+ ++E+ G+ P+ SN + +I
Sbjct: 177 SFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 217
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 78/221 (35%), Gaps = 56/221 (25%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E +++ L HP L LY C+V EF G L Q F+ +
Sbjct: 50 EAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQ-RGLFAAETLLGMCL 108
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
+V + YL +I+RDL N LV + I +SDF
Sbjct: 109 DVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFG---------------------- 146
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
+ RF + + T + PV ++ SPEV
Sbjct: 147 -----------------MTRFVLDDQYTSSTGTKF----PV-----------KWASPEVF 174
Query: 319 SGGSHGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTLRNI 358
S + + D W+FG+ ++E+ G+ P+ SN + +I
Sbjct: 175 SFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 215
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 87/239 (36%), Gaps = 53/239 (22%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E I+ DHP + L S I+ EF G L S +Q +F++
Sbjct: 84 EASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFL-RQNDGQFTVIQLVGMLR 142
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
+ ++YL + ++RDL N+LV S+ +SDF LS
Sbjct: 143 GIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLS------------------RF 184
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
T Y++ L G K P R E + R +
Sbjct: 185 LEDDTSDPTYTSAL--------GGK-----IPIRWTAPEAIQYRKFT------------- 218
Query: 319 SGGSHGNAVDWWAFGIFIYE-MIYGRTPFAAPSNETTLRNIVKK-PLTFPTQSPSSMSE 375
+A D W++GI ++E M YG P+ +N+ + I + L P PS++ +
Sbjct: 219 ------SASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPPMDCPSALHQ 271
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 78/221 (35%), Gaps = 56/221 (25%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E +++ L HP L LY C+V EF G L Q F+ +
Sbjct: 55 EAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQ-RGLFAAETLLGMCL 113
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
+V + YL +I+RDL N LV + I +SDF
Sbjct: 114 DVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFG---------------------- 151
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
+ RF + + T + PV ++ SPEV
Sbjct: 152 -----------------MTRFVLDDQYTSSTGTKF----PV-----------KWASPEVF 179
Query: 319 SGGSHGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTLRNI 358
S + + D W+FG+ ++E+ G+ P+ SN + +I
Sbjct: 180 SFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 220
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%)
Query: 166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVR 225
I MEFC G L K+ ++ A ++ ++Y+H +I+RDLKP N+ +
Sbjct: 111 IQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLV 170
Query: 226 SDGHIMLSDFDL 237
+ + DF L
Sbjct: 171 DTKQVKIGDFGL 182
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 78/221 (35%), Gaps = 56/221 (25%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E +++ L HP L LY C+V EF G L Q F+ +
Sbjct: 53 EAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQ-RGLFAAETLLGMCL 111
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
+V + YL +I+RDL N LV + I +SDF
Sbjct: 112 DVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFG---------------------- 149
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
+ RF + + T + PV ++ SPEV
Sbjct: 150 -----------------MTRFVLDDQYTSSTGTKF----PV-----------KWASPEVF 177
Query: 319 SGGSHGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTLRNI 358
S + + D W+FG+ ++E+ G+ P+ SN + +I
Sbjct: 178 SFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 218
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVR 225
+VME+ G L + R + Y++++ +EYL ++RDL N+LV
Sbjct: 87 LVMEYLPSGCLRDFLQRH-RARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVE 145
Query: 226 SDGHIMLSDFDLS 238
S+ H+ ++DF L+
Sbjct: 146 SEAHVKIADFGLA 158
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Query: 166 IVMEFCSGGDLHSL--RHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVL 223
+VME+ G L RH+ R + Y++++ +EYL ++RDL N+L
Sbjct: 91 LVMEYLPSGCLRDFLQRHR---ARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNIL 147
Query: 224 VRSDGHIMLSDFDLS 238
V S+ H+ ++DF L+
Sbjct: 148 VESEAHVKIADFGLA 162
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 59/159 (37%), Gaps = 15/159 (9%)
Query: 80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEME 139
+D + +G G G V KY + RG + + E
Sbjct: 24 KDLTFLKELGTGQFGVV-------KYGKWRGQYDVAIKMIKEGSMSEDEFIE-------E 69
Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAE 199
K++ L H L LY I+ E+ + G L + + H RF +
Sbjct: 70 AKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRH-RFQTQQLLEMCKD 128
Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
V A+EYL ++RDL N LV G + +SDF LS
Sbjct: 129 VCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLS 167
Score = 29.3 bits (64), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 315 PEVASGGSHGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTLRNIVK 360
PEV + D WAFG+ ++E+ G+ P+ +N T +I +
Sbjct: 190 PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQ 236
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 59/159 (37%), Gaps = 15/159 (9%)
Query: 80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEME 139
+D + +G G G V KY + RG + + E
Sbjct: 24 KDLTFLKELGTGQFGVV-------KYGKWRGQYDVAIKMIKEGSMSEDEFIE-------E 69
Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAE 199
K++ L H L LY I+ E+ + G L + + H RF +
Sbjct: 70 AKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRH-RFQTQQLLEMCKD 128
Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
V A+EYL ++RDL N LV G + +SDF LS
Sbjct: 129 VCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLS 167
Score = 29.6 bits (65), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 315 PEVASGGSHGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTLRNIVK 360
PEV + D WAFG+ ++E+ G+ P+ +N T +I +
Sbjct: 190 PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQ 236
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Query: 166 IVMEFCSGGDLHSL--RHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVL 223
+VME+ G L RH+ R + Y++++ +EYL ++RDL N+L
Sbjct: 90 LVMEYLPSGCLRDFLQRHR---ARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNIL 146
Query: 224 VRSDGHIMLSDFDLS 238
V S+ H+ ++DF L+
Sbjct: 147 VESEAHVKIADFGLA 161
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 66/175 (37%), Gaps = 15/175 (8%)
Query: 67 RSATFGRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXX 126
+ A G + + D ++ +IGAG GTV+ + G + M
Sbjct: 24 QGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEWH-------GSDVAVKILMEQDFHAE 76
Query: 127 XXXXXXXHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHK 186
E I+K L HP + IV E+ S G L+ L HK +
Sbjct: 77 RVNEFLR-----EVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAR 131
Query: 187 RFSLTSARFYAA-EVLVALEYLHMLG--IIYRDLKPENVLVRSDGHIMLSDFDLS 238
R A +V + YLH I++RDLK N+LV + + DF LS
Sbjct: 132 EQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLS 186
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 94/282 (33%), Gaps = 70/282 (24%)
Query: 80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEME 139
+D + +G G G V KY + RG + + E
Sbjct: 9 KDLTFLKELGTGQFGVV-------KYGKWRGQYDVAIKMIKEGSMSEDEFIE-------E 54
Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAE 199
K++ L H L LY I+ E+ + G L + + H RF +
Sbjct: 55 AKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRH-RFQTQQLLEMCKD 113
Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXX 259
V A+EYL ++RDL N LV G + +SDF LS
Sbjct: 114 VCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLS------------------RYV 155
Query: 260 RSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVAS 319
YT S+R S+F PV + PEV
Sbjct: 156 LDDEYT---SSRGSKF----------------------PV-----------RWSPPEVLM 179
Query: 320 GGSHGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTLRNIVK 360
+ D WAFG+ ++E+ G+ P+ +N T +I +
Sbjct: 180 YSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQ 221
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Query: 166 IVMEFCSGGDLHSL--RHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVL 223
+VME+ G L RH+ R + Y++++ +EYL ++RDL N+L
Sbjct: 103 LVMEYLPSGCLRDFLQRHR---ARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNIL 159
Query: 224 VRSDGHIMLSDFDLS 238
V S+ H+ ++DF L+
Sbjct: 160 VESEAHVKIADFGLA 174
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 51/115 (44%), Gaps = 12/115 (10%)
Query: 312 YVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETT----LRNIVKKPLTFPT 367
YV+PEV + + D W+ G+ +Y ++ G PF + + + R I FP
Sbjct: 176 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPN 235
Query: 368 QSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTP 422
S +SE A+ LI LL DP RL HP+ +N +++ TP
Sbjct: 236 PEWSEVSE-DAKQLIRLLLKTDPTERL----TITQFMNHPW---INQSMVVPQTP 282
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVR 225
I+ME GG+L S ++ + F+ A ++ A+++LH I +RD+KPEN+L
Sbjct: 84 IIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYT 143
Query: 226 S---DGHIMLSDF 235
S D + L+DF
Sbjct: 144 SKEKDAVLKLTDF 156
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 51/115 (44%), Gaps = 12/115 (10%)
Query: 312 YVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETT----LRNIVKKPLTFPT 367
YV+PEV + + D W+ G+ +Y ++ G PF + + + R I FP
Sbjct: 195 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPN 254
Query: 368 QSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGLNFALIRSLTP 422
S +SE A+ LI LL DP RL HP+ +N +++ TP
Sbjct: 255 PEWSEVSE-DAKQLIRLLLKTDPTERL----TITQFMNHPW---INQSMVVPQTP 301
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVR 225
I+ME GG+L S ++ + F+ A ++ A+++LH I +RD+KPEN+L
Sbjct: 103 IIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYT 162
Query: 226 S---DGHIMLSDF 235
S D + L+DF
Sbjct: 163 SKEKDAVLKLTDF 175
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 165 CIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLV 224
+V E+ + D KQ ++ + RFY E+L AL+Y H GI++RD+KP NV++
Sbjct: 111 ALVFEYINNTDF-----KQLYQILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMI 165
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 5/65 (7%)
Query: 160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKP 219
S +V E+ + D KQ ++ + RFY E+L AL+Y H GI++RD+KP
Sbjct: 111 VSKTPALVFEYINNTDF-----KQLYQILTDFDIRFYMYELLKALDYCHSKGIMHRDVKP 165
Query: 220 ENVLV 224
NV++
Sbjct: 166 HNVMI 170
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 35/57 (61%)
Query: 187 RFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNA 243
+FS ++ ++L L+Y+H G+++RDLKP N+ V D + + DF L+ ++A
Sbjct: 122 KFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADA 178
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 55/149 (36%), Gaps = 43/149 (28%)
Query: 295 VAEPVAARSCSFVGTHEYVSPEVASGGSHGN-AVDWWAFGIFIYEMIYGRTPF------- 346
+A A +V T Y +PEV H N VD W+ G + EM+ G+T F
Sbjct: 172 LARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD 231
Query: 347 -----------------------AAPSNETTLRNIVKKPLT--FPTQSPSSMSEYHARDL 381
AA S +L +K T FP SP A DL
Sbjct: 232 QLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASP------QAADL 285
Query: 382 ISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
+ +L D RL AA THPFF+
Sbjct: 286 LEKMLELDVDKRL----TAAQALTHPFFE 310
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 59/159 (37%), Gaps = 15/159 (9%)
Query: 80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEME 139
+D + +G G G V KY + RG + + E
Sbjct: 15 KDLTFLKELGTGQFGVV-------KYGKWRGQYDVAIKMIKEGSMSEDEFIE-------E 60
Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAE 199
K++ L H L LY I+ E+ + G L + + H RF +
Sbjct: 61 AKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRH-RFQTQQLLEMCKD 119
Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
V A+EYL ++RDL N LV G + +SDF LS
Sbjct: 120 VCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLS 158
Score = 29.6 bits (65), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 315 PEVASGGSHGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTLRNIVK 360
PEV + D WAFG+ ++E+ G+ P+ +N T +I +
Sbjct: 181 PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQ 227
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 1/101 (0%)
Query: 138 MEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYA 197
E +++K L H L LYA IV E+ S G L + K L A
Sbjct: 311 QEAQVMKKLRHEKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMA 369
Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
A++ + Y+ + ++RDL+ N+LV + ++DF L+
Sbjct: 370 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 410
Score = 32.3 bits (72), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 7/85 (8%)
Query: 311 EYVSPEVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKK-PLTFPTQ 368
++ +PE A G D W+FGI + E+ GR P+ N L + + + P +
Sbjct: 429 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE 488
Query: 369 SPSSMSEYHARDLISGLLNKDPCNR 393
P S+ DL+ K+P R
Sbjct: 489 CPESL-----HDLMCQCWRKEPEER 508
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 1/100 (1%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E +++K L H L LYA IVME+ S G L + K L AA
Sbjct: 63 EAQVMKKLRHEKLVQLYAVVSEEPIY-IVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAA 121
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
++ + Y+ + ++RDL+ N+LV + ++DF L+
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 161
Score = 35.0 bits (79), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 7/85 (8%)
Query: 311 EYVSPEVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKK-PLTFPTQ 368
++ +PE A G D W+FGI + E+ GR P+ N L + + + P +
Sbjct: 180 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE 239
Query: 369 SPSSMSEYHARDLISGLLNKDPCNR 393
P S+ DL+ KDP R
Sbjct: 240 CPESL-----HDLMCQCWRKDPEER 259
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 59/159 (37%), Gaps = 15/159 (9%)
Query: 80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEME 139
+D + +G G G V KY + RG + + E
Sbjct: 8 KDLTFLKELGTGQFGVV-------KYGKWRGQYDVAIKMIKEGSMSEDEFIE-------E 53
Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAE 199
K++ L H L LY I+ E+ + G L + + H RF +
Sbjct: 54 AKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRH-RFQTQQLLEMCKD 112
Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
V A+EYL ++RDL N LV G + +SDF LS
Sbjct: 113 VCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLS 151
Score = 29.6 bits (65), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 315 PEVASGGSHGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTLRNIVK 360
PEV + D WAFG+ ++E+ G+ P+ +N T +I +
Sbjct: 174 PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQ 220
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 41/100 (41%), Gaps = 1/100 (1%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E +ILK HP + L IVME GGD + + R + +
Sbjct: 162 EARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTE-GARLRVKTLLQMVG 220
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ +EYL I+RDL N LV + +SDF +S
Sbjct: 221 DAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMS 260
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 311 EYVSPEVASGGSHGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTLRNIVKKPLTFP 366
++ +PE + G + + D W+FGI ++E G +P+ SN+ T R V+K P
Sbjct: 280 KWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQT-REFVEKGGRLP 335
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 41/100 (41%), Gaps = 1/100 (1%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E +ILK HP + L IVME GGD + + R + +
Sbjct: 162 EARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTE-GARLRVKTLLQMVG 220
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ +EYL I+RDL N LV + +SDF +S
Sbjct: 221 DAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMS 260
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 311 EYVSPEVASGGSHGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTLRNIVKKPLTFP 366
++ +PE + G + + D W+FGI ++E G +P+ SN+ T R V+K P
Sbjct: 280 KWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQT-REFVEKGGRLP 335
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 59/159 (37%), Gaps = 15/159 (9%)
Query: 80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEME 139
+D + +G G G V KY + RG + + E
Sbjct: 9 KDLTFLKELGTGQFGVV-------KYGKWRGQYDVAIKMIKEGSMSEDEFIE-------E 54
Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAE 199
K++ L H L LY I+ E+ + G L + + H RF +
Sbjct: 55 AKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRH-RFQTQQLLEMCKD 113
Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
V A+EYL ++RDL N LV G + +SDF LS
Sbjct: 114 VCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLS 152
Score = 29.6 bits (65), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 315 PEVASGGSHGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTLRNIVK 360
PEV + D WAFG+ ++E+ G+ P+ +N T +I +
Sbjct: 175 PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQ 221
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 59/159 (37%), Gaps = 15/159 (9%)
Query: 80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEME 139
+D + +G G G V KY + RG + + E
Sbjct: 4 KDLTFLKELGTGQFGVV-------KYGKWRGQYDVAIKMIKEGSMSEDEFIE-------E 49
Query: 140 KKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAE 199
K++ L H L LY I+ E+ + G L + + H RF +
Sbjct: 50 AKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRH-RFQTQQLLEMCKD 108
Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
V A+EYL ++RDL N LV G + +SDF LS
Sbjct: 109 VCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLS 147
Score = 30.0 bits (66), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 315 PEVASGGSHGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTLRNIVK 360
PEV + D WAFG+ ++E+ G+ P+ +N T +I +
Sbjct: 170 PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQ 216
>pdb|2V62|A Chain A, Structure Of Vaccinia-Related Kinase 2
pdb|2V62|B Chain B, Structure Of Vaccinia-Related Kinase 2
Length = 345
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 13/170 (7%)
Query: 84 LHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKKIL 143
L ++IG+G G +YL NK +D H Y + + KK +
Sbjct: 41 LGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWI 100
Query: 144 --KMLDHPFLPTLYA----EFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYA 197
K LD+ +P Y EF+ ++ +VME G DL + + + F ++
Sbjct: 101 ERKQLDYLGIPLFYGSGLTEFKGRSYRFMVMERL-GIDLQKISGQ--NGTFKKSTVLQLG 157
Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLV--RSDGHIMLSDFDLS--LCSNA 243
+L LEY+H ++ D+K N+L+ ++ + L+D+ LS C N
Sbjct: 158 IRMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNG 207
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 2/100 (2%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E +I+ LD+P++ L +A +VME GG LH + + +++
Sbjct: 60 EAQIMHQLDNPYIVRLIGVCQAEALM-LVMEMAGGGPLHKFLVGK-REEIPVSNVAELLH 117
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+V + ++YL ++RDL NVL+ + + +SDF LS
Sbjct: 118 QVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLS 157
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 91/243 (37%), Gaps = 70/243 (28%)
Query: 134 HRAEMEKKILKMLDHP------FLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKR 187
++A++E ++L++++ ++ L F N C+V E S +L+ L +
Sbjct: 95 NQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSY-NLYDLLRNTNFRG 153
Query: 188 FSLTSARFYAAEVLVALEYLHM--LGIIYRDLKPENVLVRS--DGHIMLSDFDLSLCSNA 243
SL R +A ++ AL +L L II+ DLKPEN+L+ + I + DF S
Sbjct: 154 VSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSS----- 208
Query: 244 IXXXXXXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARS 303
Q R Y SRF
Sbjct: 209 -----------------CQLGQRIYQXIQSRF---------------------------- 223
Query: 304 CSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPL 363
Y SPEV G + A+D W+ G + EM G P + +NE N + + L
Sbjct: 224 --------YRSPEVLLGMPYDLAIDMWSLGCILVEMHTGE-PLFSGANEVDQMNKIVEVL 274
Query: 364 TFP 366
P
Sbjct: 275 GIP 277
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E +++K L H L LYA IV E+ S G L + K L AA
Sbjct: 53 EAQVMKKLRHEKLVQLYAVVSEEPIX-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAA 111
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
++ + Y+ + ++RDL+ N+LV + ++DF L+
Sbjct: 112 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 151
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 7/85 (8%)
Query: 311 EYVSPEVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKK-PLTFPTQ 368
++ +PE A G D W+FGI + E+ GR P+ N L + + + P +
Sbjct: 170 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE 229
Query: 369 SPSSMSEYHARDLISGLLNKDPCNR 393
P S+ DL+ K+P R
Sbjct: 230 CPESL-----HDLMCQCWRKEPEER 249
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 91/243 (37%), Gaps = 70/243 (28%)
Query: 134 HRAEMEKKILKMLDHP------FLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKR 187
++A++E ++L++++ ++ L F N C+V E S +L+ L +
Sbjct: 76 NQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSY-NLYDLLRNTNFRG 134
Query: 188 FSLTSARFYAAEVLVALEYLHM--LGIIYRDLKPENVLVRS--DGHIMLSDFDLSLCSNA 243
SL R +A ++ AL +L L II+ DLKPEN+L+ + I + DF S
Sbjct: 135 VSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSS----- 189
Query: 244 IXXXXXXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARS 303
Q R Y SRF
Sbjct: 190 -----------------CQLGQRIYQXIQSRF---------------------------- 204
Query: 304 CSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPL 363
Y SPEV G + A+D W+ G + EM G P + +NE N + + L
Sbjct: 205 --------YRSPEVLLGMPYDLAIDMWSLGCILVEMHTGE-PLFSGANEVDQMNKIVEVL 255
Query: 364 TFP 366
P
Sbjct: 256 GIP 258
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E +++K L H L LYA IV E+ S G L + K L AA
Sbjct: 229 EAQVMKKLRHEKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAA 287
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
++ + Y+ + ++RDL+ N+LV + ++DF L+
Sbjct: 288 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 327
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 7/85 (8%)
Query: 311 EYVSPEVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKK-PLTFPTQ 368
++ +PE A G D W+FGI + E+ GR P+ N L + + + P +
Sbjct: 346 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE 405
Query: 369 SPSSMSEYHARDLISGLLNKDPCNR 393
P S+ DL+ K+P R
Sbjct: 406 CPESL-----HDLMCQCWRKEPEER 425
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 91/243 (37%), Gaps = 70/243 (28%)
Query: 134 HRAEMEKKILKMLDHP------FLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKR 187
++A++E ++L++++ ++ L F N C+V E S +L+ L +
Sbjct: 95 NQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSY-NLYDLLRNTNFRG 153
Query: 188 FSLTSARFYAAEVLVALEYLHM--LGIIYRDLKPENVLVRSDGH--IMLSDFDLSLCSNA 243
SL R +A ++ AL +L L II+ DLKPEN+L+ + I + DF S
Sbjct: 154 VSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRXAIKIVDFGSS----- 208
Query: 244 IXXXXXXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARS 303
Q R Y SRF
Sbjct: 209 -----------------CQLGQRIYQXIQSRF---------------------------- 223
Query: 304 CSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPL 363
Y SPEV G + A+D W+ G + EM G P + +NE N + + L
Sbjct: 224 --------YRSPEVLLGMPYDLAIDMWSLGCILVEMHTGE-PLFSGANEVDQMNKIVEVL 274
Query: 364 TFP 366
P
Sbjct: 275 GIP 277
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E +++K L H L LYA IV E+ S G L + K L AA
Sbjct: 229 EAQVMKKLRHEKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAA 287
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
++ + Y+ + ++RDL+ N+LV + ++DF L+
Sbjct: 288 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 327
Score = 32.7 bits (73), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 7/85 (8%)
Query: 311 EYVSPEVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKK-PLTFPTQ 368
++ +PE A G D W+FGI + E+ GR P+ N L + + + P +
Sbjct: 346 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE 405
Query: 369 SPSSMSEYHARDLISGLLNKDPCNR 393
P S+ DL+ K+P R
Sbjct: 406 CPESL-----HDLMCQCWRKEPEER 425
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 59/141 (41%), Gaps = 22/141 (15%)
Query: 308 GTHEYVSPEVASGGS--HGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL-RNIVKKPLT 364
GT+E++ PE S S +G VD W+ GI +Y M Y PF+ + L NI K +
Sbjct: 212 GTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIE 271
Query: 365 FP----------TQSPSSMSEYHAR----DLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
+P T S+ S D + L K+P R+ S+ D H +
Sbjct: 272 YPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSE----DALKHEWLA 327
Query: 411 GLNFALIRSLTPPEIPGMRRQ 431
N +R + E+ R++
Sbjct: 328 DTNIEDLREFS-KELYKKRKK 347
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 200 VLVALEYLH-MLGIIYRDLKPENVLVRSDGHIMLSDF 235
VL + Y+H I +RD+KP N+L+ +G + LSDF
Sbjct: 160 VLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDF 196
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 1/100 (1%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E +++K L H L LYA IV+E+ S G L + K L AA
Sbjct: 63 EAQVMKKLRHEKLVQLYAVVSEEPIY-IVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA 121
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
++ + Y+ + ++RDL+ N+LV + ++DF L+
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 161
Score = 35.0 bits (79), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 7/85 (8%)
Query: 311 EYVSPEVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKK-PLTFPTQ 368
++ +PE A G D W+FGI + E+ GR P+ N L + + + P +
Sbjct: 180 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE 239
Query: 369 SPSSMSEYHARDLISGLLNKDPCNR 393
P S+ DL+ KDP R
Sbjct: 240 CPESL-----HDLMCQCWRKDPEER 259
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 61/158 (38%), Gaps = 13/158 (8%)
Query: 81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEK 140
D + ++G G G VY +++ Y++ E
Sbjct: 12 DITMKHKLGGGQYGEVY----EGVWKK---------YSLTVAVKTLKEDTMEVEEFLKEA 58
Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
++K + HP L L I++EF + G+L + + S + A ++
Sbjct: 59 AVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQI 118
Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
A+EYL I+RDL N LV + + ++DF LS
Sbjct: 119 SSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS 156
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 61/156 (39%), Gaps = 16/156 (10%)
Query: 84 LHRRIGAGDIGTVYLCSLNNKYRQD-RGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKKI 142
L +++GAG G V++ NN + + +P + E +
Sbjct: 16 LVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLE---------------EANL 60
Query: 143 LKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLV 202
+K L H L LYA I+ EF + G L + L ++A++
Sbjct: 61 MKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAE 120
Query: 203 ALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ Y+ I+RDL+ NVLV ++DF L+
Sbjct: 121 GMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLA 156
Score = 32.7 bits (73), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 311 EYVSPEVASGGSHGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTL 355
++ +PE + G + W+FGI +YE++ YG+ P+ +N +
Sbjct: 175 KWTAPEAINFGCFTIKSNVWSFGILLYEIVTYGKIPYPGRTNADVM 220
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 61/158 (38%), Gaps = 13/158 (8%)
Query: 81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEK 140
D + ++G G G VY +++ Y++ E
Sbjct: 14 DITMKHKLGGGQYGEVY----EGVWKK---------YSLTVAVKTLKEDTMEVEEFLKEA 60
Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
++K + HP L L I++EF + G+L + + S + A ++
Sbjct: 61 AVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQI 120
Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
A+EYL I+RDL N LV + + ++DF LS
Sbjct: 121 SSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS 158
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 70/171 (40%), Gaps = 21/171 (12%)
Query: 75 TGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXH 134
T R R++G G+ G+V +C + QD E + +
Sbjct: 8 TQFEERHLKFLRQLGKGNFGSVEMCRYDP--LQDNTGEVVAVKKLQHSTEEHLRDF---- 61
Query: 135 RAEMEKKILKMLDHPFLPTLYAEFEASNFSC------IVMEFCSGGDLHSLRHKQPHK-R 187
E E +ILK L H + +++ +S ++MEF G L + Q HK R
Sbjct: 62 --EREIEILKSLQHDNI----VKYKGVCYSAGRRNLKLIMEFLPYGSLRE--YLQKHKER 113
Query: 188 FSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
Y +++ +EYL I+RDL N+LV ++ + + DF L+
Sbjct: 114 IDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 164
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 1/100 (1%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E +++K L H L LYA IV+E+ S G L + K L AA
Sbjct: 63 EAQVMKKLRHEKLVQLYAVVSEEPIY-IVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA 121
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
++ + Y+ + ++RDL+ N+LV + ++DF L+
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 161
Score = 35.0 bits (79), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 7/85 (8%)
Query: 311 EYVSPEVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKK-PLTFPTQ 368
++ +PE A G D W+FGI + E+ GR P+ N L + + + P +
Sbjct: 180 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE 239
Query: 369 SPSSMSEYHARDLISGLLNKDPCNR 393
P S+ DL+ KDP R
Sbjct: 240 CPESL-----HDLMCQCWRKDPEER 259
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 34/57 (59%)
Query: 187 RFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNA 243
FS ++ ++L L+Y+H G+++RDLKP N+ V D + + DF L+ ++A
Sbjct: 140 EFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADA 196
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 55/149 (36%), Gaps = 43/149 (28%)
Query: 295 VAEPVAARSCSFVGTHEYVSPEVASGGSHGN-AVDWWAFGIFIYEMIYGRTPF------- 346
+A A +V T Y +PEV H N VD W+ G + EM+ G+T F
Sbjct: 190 LARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD 249
Query: 347 -----------------------AAPSNETTLRNIVKKPLT--FPTQSPSSMSEYHARDL 381
AA S +L +K T FP SP A DL
Sbjct: 250 QLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASP------QAADL 303
Query: 382 ISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
+ +L D RL AA THPFF+
Sbjct: 304 LEKMLELDVDKRL----TAAQALTHPFFE 328
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/286 (18%), Positives = 102/286 (35%), Gaps = 65/286 (22%)
Query: 84 LHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKKIL 143
L RIG+G GTVY + + H + + + E +L
Sbjct: 40 LSTRIGSGSFGTVY---------KGKWHGDVAVKILKVVDPTPEQFQAFRN----EVAVL 86
Query: 144 KMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVA 203
+ H + L+ + + IV ++C G L+ H Q K F + A +
Sbjct: 87 RKTRHVNI-LLFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETK-FQMFQLIDIARQTAQG 144
Query: 204 LEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQT 263
++YLH II+RD+K N+ + + + DF L+
Sbjct: 145 MDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVK---------------------- 182
Query: 264 YTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSH 323
+R+ GS++++ T + L++A V +
Sbjct: 183 -------------SRWSGSQQVEQPTGSVLWMAPEVI---------------RMQDNNPF 214
Query: 324 GNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQS 369
D +++GI +YE++ G P++ +N + +V + P S
Sbjct: 215 SFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLS 260
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
G DL+++ Q + + +F ++L L+Y+H II+RDLKP N+ V D + +
Sbjct: 110 GADLNNIVKSQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKI 166
Query: 233 SDFDL 237
DF L
Sbjct: 167 LDFGL 171
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 306 FVGTHEYVSPEVASGGSHGN-AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT 364
+V T Y +PE+ H N VD W+ G + E++ GRT F + L+ I++ T
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 365 FPTQSPSSMSEYHARDLISGL 385
+ +S AR+ I L
Sbjct: 242 PGAELLKKISSESARNYIQSL 262
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 61/158 (38%), Gaps = 13/158 (8%)
Query: 81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEK 140
D + ++G G G VY +++ Y++ E
Sbjct: 14 DITMKHKLGGGQYGEVY----EGVWKK---------YSLTVAVKTLKEDTMEVEEFLKEA 60
Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
++K + HP L L I++EF + G+L + + S + A ++
Sbjct: 61 AVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQI 120
Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
A+EYL I+RDL N LV + + ++DF LS
Sbjct: 121 SSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS 158
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLV- 224
IV E GG+L S + + F+ A + A++YLH + I +RD+KPEN+L
Sbjct: 136 IVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSINIAHRDVKPENLLYT 195
Query: 225 --RSDGHIMLSDF 235
R + + L+DF
Sbjct: 196 SKRPNAILKLTDF 208
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 11/89 (12%)
Query: 312 YVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPF-------AAPSNETTLRNIVKKPLT 364
YV+PEV + + D W+ G+ Y ++ G PF +P +T +R
Sbjct: 229 YVAPEVLGPEKYDKSCDXWSLGVIXYILLCGYPPFYSNHGLAISPGXKTRIR---XGQYE 285
Query: 365 FPTQSPSSMSEYHARDLISGLLNKDPCNR 393
FP S +SE + LI LL +P R
Sbjct: 286 FPNPEWSEVSE-EVKXLIRNLLKTEPTQR 313
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 11/95 (11%)
Query: 151 LPTLYAEFEASNFSCIVMEFC--SGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLH 208
LP +Y ++ +V+E S DL L + F+L + A ++L +EY+H
Sbjct: 59 LPQVYYFGPXGKYNAMVLELLGPSLEDLFDL----CDRTFTLKTVLMIAIQLLSRMEYVH 114
Query: 209 MLGIIYRDLKPENVLVRSDGH-----IMLSDFDLS 238
+IYRD+KPEN L+ G+ I + DF L+
Sbjct: 115 SKNLIYRDVKPENFLIGRQGNKKEHVIHIIDFGLA 149
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
G DL+++ Q + + +F ++L L+Y+H II+RDLKP N+ V D + +
Sbjct: 110 GADLNNIVKXQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKI 166
Query: 233 SDFDLS 238
DF L+
Sbjct: 167 LDFGLA 172
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Query: 304 CSFVGTHEYVSPEVASGGSHGN-AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKP 362
+V T Y +PE+ H N VD W+ G + E++ GRT F + L+ I++
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
Query: 363 LTFPTQSPSSMSEYHARDLISGL 385
T + +S AR+ I L
Sbjct: 240 GTPGAELLKKISSESARNYIQSL 262
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 62/157 (39%), Gaps = 15/157 (9%)
Query: 82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
L +R+G G G V++ + N G+ + + E +
Sbjct: 11 LQLIKRLGNGQFGEVWMGTWN-------GNTKVAIKTLKPGTMSPESFLE-------EAQ 56
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
I+K L H L LYA IV E+ + G L + L + AA+V
Sbjct: 57 IMKKLKHDKLVQLYAVVSEEPIY-IVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVA 115
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ Y+ + I+RDL+ N+LV + ++DF L+
Sbjct: 116 AGMAYIERMNYIHRDLRSANILVGNGLICKIADFGLA 152
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 7/85 (8%)
Query: 311 EYVSPEVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKK-PLTFPTQ 368
++ +PE A G D W+FGI + E++ GR P+ +N L + + + P
Sbjct: 171 KWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPCPQD 230
Query: 369 SPSSMSEYHARDLISGLLNKDPCNR 393
P S+ E L+ KDP R
Sbjct: 231 CPISLHE-----LMIHCWKKDPEER 250
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E +++K L H L LYA IV E+ S G L + K L AA
Sbjct: 56 EAQVMKKLRHEKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAA 114
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
++ + Y+ + ++RDL+ N+LV + ++DF L+
Sbjct: 115 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 154
Score = 33.1 bits (74), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 7/85 (8%)
Query: 311 EYVSPEVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKK-PLTFPTQ 368
++ +PE A G D W+FGI + E+ GR P+ N L + + + P +
Sbjct: 173 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE 232
Query: 369 SPSSMSEYHARDLISGLLNKDPCNR 393
P S+ DL+ K+P R
Sbjct: 233 CPESL-----HDLMCQCWRKEPEER 252
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 61/156 (39%), Gaps = 16/156 (10%)
Query: 84 LHRRIGAGDIGTVYLCSLNNKYRQD-RGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKKI 142
L +R+GAG G V++ NN + + +P + E +
Sbjct: 17 LVKRLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLE---------------EANL 61
Query: 143 LKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLV 202
+K L H L LYA I+ E+ + G L + L ++A++
Sbjct: 62 MKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAE 121
Query: 203 ALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ Y+ I+RDL+ NVLV ++DF L+
Sbjct: 122 GMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLA 157
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 311 EYVSPEVASGGSHGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTL 355
++ +PE + G D W+FGI +YE++ YG+ P+ +N +
Sbjct: 176 KWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVM 221
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 60/158 (37%), Gaps = 13/158 (8%)
Query: 81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEK 140
D + ++G G G VY +++ Y++ E
Sbjct: 12 DITMKHKLGGGQFGEVY----EGVWKK---------YSLTVAVKTLKEDTMEVEEFLKEA 58
Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
++K + HP L L I+ EF + G+L + + S + A ++
Sbjct: 59 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQI 118
Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
A+EYL I+RDL N LV + + ++DF LS
Sbjct: 119 SSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS 156
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E +++K L H L LYA IV E+ S G L + K L AA
Sbjct: 229 EAQVMKKLRHEKLVQLYAVVSEEPIY-IVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAA 287
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
++ + Y+ + ++RDL+ N+LV + ++DF L+
Sbjct: 288 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 327
Score = 32.7 bits (73), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 7/85 (8%)
Query: 311 EYVSPEVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKK-PLTFPTQ 368
++ +PE A G D W+FGI + E+ GR P+ N L + + + P +
Sbjct: 346 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE 405
Query: 369 SPSSMSEYHARDLISGLLNKDPCNR 393
P S+ DL+ K+P R
Sbjct: 406 CPESL-----HDLMCQCWRKEPEER 425
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 65/169 (38%), Gaps = 29/169 (17%)
Query: 188 FSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLV-RSDGHIMLSDFDLSLCSNAIXX 246
S R Y + AL+ +H GI++RD+KP N L R L DF L+ ++
Sbjct: 114 LSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKI 173
Query: 247 XXXXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSF 306
R + S LSR + VA R+
Sbjct: 174 ELLKFVQSEAQQERCS--QNKCSICLSR---------------------RQQVAPRA--- 207
Query: 307 VGTHEYVSPEVASGG-SHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETT 354
GT + +PEV + + A+D W+ G+ ++ GR PF S++ T
Sbjct: 208 -GTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDDLT 255
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 66/175 (37%), Gaps = 15/175 (8%)
Query: 67 RSATFGRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXX 126
+ A G + + D ++ +IGAG GTV+ + G + M
Sbjct: 24 QGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEWH-------GSDVAVKILMEQDFHAE 76
Query: 127 XXXXXXXHRAEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHK 186
E I+K L HP + IV E+ S G L+ L HK +
Sbjct: 77 RVNEFLR-----EVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAR 131
Query: 187 RFSLTSARFYAA-EVLVALEYLHMLG--IIYRDLKPENVLVRSDGHIMLSDFDLS 238
R A +V + YLH I++R+LK N+LV + + DF LS
Sbjct: 132 EQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLS 186
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
G DL+++ Q + + +F ++L L+Y+H II+RDLKP N+ V D + +
Sbjct: 110 GADLNNIVKXQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 233 SDFDLS 238
DF L+
Sbjct: 167 LDFGLA 172
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 306 FVGTHEYVSPEVASGGSHGN-AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT 364
+V T Y +PE+ H N VD W+ G + E++ GRT F + L+ I++ T
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 365 FPTQSPSSMSEYHARDLISGL 385
+ +S AR+ I L
Sbjct: 242 PGAELLKKISSESARNYIQSL 262
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/278 (19%), Positives = 93/278 (33%), Gaps = 70/278 (25%)
Query: 82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
L R+GAG G V++ N GH + ++ E
Sbjct: 15 LKLVERLGAGQAGEVWMGYYN-------GHTKVAVKSLKQGSMSPDAFLA-------EAN 60
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
++K L H L LYA I+ E+ G L + ++ AA++
Sbjct: 61 LMKQLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIA 119
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRS 261
+ ++ I+RDL+ N+LV ++DF
Sbjct: 120 EGMAFIEERNYIHRDLRAANILVSDTLSCKIADFG------------------------- 154
Query: 262 QTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGG 321
L+R + AE A F ++ +PE + G
Sbjct: 155 ----------LARLIED-----------------AEXTAREGAKF--PIKWTAPEAINYG 185
Query: 322 SHGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTLRNI 358
+ D W+FGI + E++ +GR P+ +N ++N+
Sbjct: 186 TFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 223
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 27/39 (69%)
Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+LV ++Y+H GI++RDLKP N LV D + + DF L+
Sbjct: 165 LLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLA 203
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 50/100 (50%), Gaps = 2/100 (2%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E +I+ LD+P++ L +A +VME GG LH + + +++
Sbjct: 386 EAQIMHQLDNPYIVRLIGVCQAEALM-LVMEMAGGGPLHKFLVGK-REEIPVSNVAELLH 443
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+V + ++YL ++R+L NVL+ + + +SDF LS
Sbjct: 444 QVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLS 483
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
G DL+++ Q + + +F ++L L+Y+H II+RDLKP N+ V D + +
Sbjct: 112 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKI 168
Query: 233 SDFDLS 238
DF L+
Sbjct: 169 LDFGLA 174
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 306 FVGTHEYVSPEVASGGSHGN-AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT 364
+V T Y +PE+ H N VD W+ G + E++ GRT F + L+ I++ T
Sbjct: 184 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 243
Query: 365 FPTQSPSSMSEYHARDLISGL 385
+ +S AR+ I L
Sbjct: 244 PGAELLKKISSESARNYIQSL 264
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 67/157 (42%), Gaps = 14/157 (8%)
Query: 86 RRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKKI--L 143
R +G G G V LC + + D E + ++ H A+++K+I L
Sbjct: 27 RDLGEGHFGKVELCRYDPE--GDNTGEQVAVKSLKPESGGN-------HIADLKKEIEIL 77
Query: 144 KMLDHPFLPTL--YAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
+ L H + + N ++MEF G L K +K +L YA ++
Sbjct: 78 RNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNK-INLKQQLKYAVQIC 136
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
++YL ++RDL NVLV S+ + + DF L+
Sbjct: 137 KGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLT 173
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 75/350 (21%), Positives = 119/350 (34%), Gaps = 99/350 (28%)
Query: 87 RIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKKILKML 146
+IG G GTV+ K + HE L + A E +LK L
Sbjct: 9 KIGEGTYGTVF------KAKNRETHEIVALKRVRLDDDDEGVPSS----ALREICLLKEL 58
Query: 147 DHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEY 206
H + L+ + +V EFC DL + + + ++L L +
Sbjct: 59 KHKNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKY-FDSCNGDLDPEIVKSFLFQLLKGLGF 116
Query: 207 LHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYTR 266
H +++RDLKP+N+L+ +G + L+DF L+
Sbjct: 117 CHSRNVLHRDLKPQNLLINRNGELKLADFGLA---------------------------- 148
Query: 267 QYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGS-HGN 325
R FG P R + AE V T Y P+V G +
Sbjct: 149 -----------RAFG-------IPVRCYSAE---------VVTLWYRPPDVLFGAKLYST 181
Query: 326 AVDWWAFGIFIYEMIYGRTP-FAAPSNETTLRNIVKKPLTFPTQ----SPSSMSEYH--- 377
++D W+ G E+ P F + L+ I + L PT+ S + + +Y
Sbjct: 182 SIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRL-LGTPTEEQWPSMTKLPDYKPYP 240
Query: 378 ------------------ARDLISGLLNKDPCNRLGSKRGAADVKTHPFF 409
RDL+ LL +P R+ A + HP+F
Sbjct: 241 MYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRI----SAEEALQHPYF 286
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E +++K L H L LYA IV E+ S G L + K L AA
Sbjct: 230 EAQVMKKLRHEKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA 288
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
++ + Y+ + ++RDL+ N+LV + ++DF L
Sbjct: 289 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLG 328
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 7/85 (8%)
Query: 311 EYVSPEVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKK-PLTFPTQ 368
++ +PE A G D W+FGI + E+ GR P+ N L + + + P +
Sbjct: 347 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE 406
Query: 369 SPSSMSEYHARDLISGLLNKDPCNR 393
P S+ DL+ KDP R
Sbjct: 407 CPESL-----HDLMCQCWRKDPEER 426
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Query: 197 AAEVLVALEYLH-MLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
A ++ ALE+LH L +I+RD+KP NVL+ + G + + DF +S
Sbjct: 159 AVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGIS 201
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
G DL+++ Q + + +F ++L L+Y+H II+RDLKP N+ V D + +
Sbjct: 116 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKI 172
Query: 233 SDFDLS 238
DF L+
Sbjct: 173 LDFGLA 178
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 306 FVGTHEYVSPEVASGGSHGN-AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT 364
+V T Y +PE+ H N VD W+ G + E++ GRT F + L+ I++ T
Sbjct: 188 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 247
Query: 365 FPTQSPSSMSEYHARDLISGL 385
+ +S AR+ I L
Sbjct: 248 PGAELLKKISSESARNYIQSL 268
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 78/221 (35%), Gaps = 54/221 (24%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E I+ DHP + L I+ E+ G L + K RF++
Sbjct: 80 EASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKN-DGRFTVIQLVGMLR 138
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
+ ++YL + ++RDL N+LV S+ +SDF +S
Sbjct: 139 GIGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMS-------------------R 179
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
Y+TR G K P R E +A R +
Sbjct: 180 VLEDDPEAAYTTR---------GGK-----IPIRWTAPEAIAYRKFT------------- 212
Query: 319 SGGSHGNAVDWWAFGIFIYE-MIYGRTPFAAPSNETTLRNI 358
+A D W++GI ++E M YG P+ SN+ ++ I
Sbjct: 213 ------SASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAI 247
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 60/158 (37%), Gaps = 13/158 (8%)
Query: 81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEK 140
D + ++G G G VY +++ Y++ E
Sbjct: 19 DITMKHKLGGGQYGEVY----EGVWKK---------YSLTVAVKTLKEDTMEVEEFLKEA 65
Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
++K + HP L L I+ EF + G+L + + S + A ++
Sbjct: 66 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQI 125
Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
A+EYL I+RDL N LV + + ++DF LS
Sbjct: 126 SSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS 163
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 104/268 (38%), Gaps = 59/268 (22%)
Query: 136 AEMEKKILKMLDHPFLPTLYA----EFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLT 191
A+ E + ++ +HP + L A E A + + +++ F G L + + K LT
Sbjct: 73 AQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLT 132
Query: 192 SAR--FYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXX 249
+ + + LE +H G +RDLKP N+L+ +G +L D
Sbjct: 133 EDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDL-------------- 178
Query: 250 XXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGT 309
+++ GS++ TL + AA+ C+
Sbjct: 179 --------------------GSMNQACIHVEGSRQALTL--------QDWAAQRCTI--- 207
Query: 310 HEYVSPEVASGGSH---GNAVDWWAFGIFIYEMIYGRTPFAAP-SNETTLRNIVKKPLTF 365
Y +PE+ S SH D W+ G +Y M++G P+ ++ V+ L+
Sbjct: 208 -SYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSI 266
Query: 366 PTQSPSSMSEYHARDLISGLLNKDPCNR 393
P QSP S L++ ++ DP R
Sbjct: 267 P-QSPRHSSAL--WQLLNSMMTVDPHQR 291
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 80/199 (40%), Gaps = 18/199 (9%)
Query: 47 SPE-NLSLKPHRSSDFAYSAIRSATFGRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKY 105
PE NLSL RS F A +++ F ++ + F ++ IG G G VY + ++
Sbjct: 1 GPEMNLSLLSARS--FPRKASQTSIFLQEWDIPFEQLEIGELIGKGRFGQVY----HGRW 54
Query: 106 RQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKKILKMLDHPFLPTLYAEFEASNFSC 165
+ + +R + ++ + P A
Sbjct: 55 HGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLA--------- 105
Query: 166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVR 225
I+ C G L+S+ + + R A E++ + YLH GI+++DLK +NV
Sbjct: 106 IITSLCKGRTLYSVV-RDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFY- 163
Query: 226 SDGHIMLSDFDLSLCSNAI 244
+G ++++DF L S +
Sbjct: 164 DNGKVVITDFGLFSISGVL 182
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E +++K L H L LYA IV E+ S G L + K L AA
Sbjct: 63 EAQVMKKLRHEKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA 121
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
++ + Y+ + ++RDL+ N+LV + ++DF L+
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 161
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 7/85 (8%)
Query: 311 EYVSPEVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKK-PLTFPTQ 368
++ +PE A G D W+FGI + E+ GR P+ N L + + + P +
Sbjct: 180 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE 239
Query: 369 SPSSMSEYHARDLISGLLNKDPCNR 393
P S+ DL+ KDP R
Sbjct: 240 CPESL-----HDLMCQCWRKDPEER 259
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E +++K L H L LYA IV E+ S G L + K L AA
Sbjct: 52 EAQVMKKLRHEKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA 110
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
++ + Y+ + ++RDL+ N+LV + ++DF L+
Sbjct: 111 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 150
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 7/85 (8%)
Query: 311 EYVSPEVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKK-PLTFPTQ 368
++ +PE A G D W+FGI + E+ GR P+ N L + + + P +
Sbjct: 169 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE 228
Query: 369 SPSSMSEYHARDLISGLLNKDPCNR 393
P S+ DL+ KDP R
Sbjct: 229 CPESL-----HDLMCQCWRKDPEER 248
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Query: 159 EASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLK 218
+ N ++MEF G L K +K +L YA ++ ++YL ++RDL
Sbjct: 83 DGGNGIKLIMEFLPSGSLKEYLPKNKNK-INLKQQLKYAVQICKGMDYLGSRQYVHRDLA 141
Query: 219 PENVLVRSDGHIMLSDFDLS 238
NVLV S+ + + DF L+
Sbjct: 142 ARNVLVESEHQVKIGDFGLT 161
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E +++K L H L LYA IV E+ S G L + K L AA
Sbjct: 54 EAQVMKKLRHEKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA 112
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
++ + Y+ + ++RDL+ N+LV + ++DF L+
Sbjct: 113 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 152
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 7/85 (8%)
Query: 311 EYVSPEVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKK-PLTFPTQ 368
++ +PE A G D W+FGI + E+ GR P+ N L + + + P +
Sbjct: 171 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE 230
Query: 369 SPSSMSEYHARDLISGLLNKDPCNR 393
P S+ DL+ KDP R
Sbjct: 231 CPESL-----HDLMCQCWRKDPEER 250
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 60/158 (37%), Gaps = 13/158 (8%)
Query: 81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEK 140
D + ++G G G VY +++ Y++ E
Sbjct: 12 DITMKHKLGGGQYGEVY----EGVWKK---------YSLTVAVKTLKEDTMEVEEFLKEA 58
Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
++K + HP L L I+ EF + G+L + + S + A ++
Sbjct: 59 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQI 118
Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
A+EYL I+RDL N LV + + ++DF LS
Sbjct: 119 SSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS 156
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 60/158 (37%), Gaps = 13/158 (8%)
Query: 81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEK 140
D + ++G G G VY +++ Y++ E
Sbjct: 14 DITMKHKLGGGQYGEVY----EGVWKK---------YSLTVAVKTLKEDTMEVEEFLKEA 60
Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
++K + HP L L I+ EF + G+L + + S + A ++
Sbjct: 61 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQI 120
Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
A+EYL I+RDL N LV + + ++DF LS
Sbjct: 121 SSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS 158
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 70/161 (43%), Gaps = 20/161 (12%)
Query: 82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
+ L R+IG+G G +YL + + A + +E K
Sbjct: 11 YRLGRKIGSGSFGDIYLGT--------------DIAAGEEVAIKLECVKTKHPQLHIESK 56
Query: 142 ILKMLDHPF-LPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
I KM+ +PT+ +++ +VME G L L ++FSL + A ++
Sbjct: 57 IYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GPSLEDL-FNFCSRKFSLKTVLLLADQM 114
Query: 201 LVALEYLHMLGIIYRDLKPENVLV---RSDGHIMLSDFDLS 238
+ +EY+H I+RD+KP+N L+ + + + DF L+
Sbjct: 115 ISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLA 155
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 78/221 (35%), Gaps = 54/221 (24%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E I+ DHP + L I+ E+ G L + K RF++
Sbjct: 59 EASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKN-DGRFTVIQLVGMLR 117
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
+ ++YL + ++RDL N+LV S+ +SDF +S
Sbjct: 118 GIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMS-------------------R 158
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
Y+TR G K P R E +A R +
Sbjct: 159 VLEDDPEAAYTTR---------GGK-----IPIRWTAPEAIAYRKFT------------- 191
Query: 319 SGGSHGNAVDWWAFGIFIYE-MIYGRTPFAAPSNETTLRNI 358
+A D W++GI ++E M YG P+ SN+ ++ I
Sbjct: 192 ------SASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAI 226
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 60/158 (37%), Gaps = 13/158 (8%)
Query: 81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEK 140
D + ++G G G VY +++ Y++ E
Sbjct: 14 DITMKHKLGGGQYGEVY----EGVWKK---------YSLTVAVKTLKEDTMEVEEFLKEA 60
Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
++K + HP L L I+ EF + G+L + + S + A ++
Sbjct: 61 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQI 120
Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
A+EYL I+RDL N LV + + ++DF LS
Sbjct: 121 SSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS 158
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E +++K L H L LYA IV E+ S G L + K L AA
Sbjct: 63 EAQVMKKLRHEKLVQLYAVVSEEPIY-IVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA 121
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
++ + Y+ + ++RDL+ N+LV + ++DF L+
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 161
Score = 35.0 bits (79), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 7/85 (8%)
Query: 311 EYVSPEVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKK-PLTFPTQ 368
++ +PE A G D W+FGI + E+ GR P+ N L + + + P +
Sbjct: 180 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE 239
Query: 369 SPSSMSEYHARDLISGLLNKDPCNR 393
P S+ DL+ KDP R
Sbjct: 240 CPESL-----HDLMCQCWRKDPEER 259
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 61/158 (38%), Gaps = 13/158 (8%)
Query: 81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEK 140
D + ++G G G VY +++ Y++ E
Sbjct: 15 DITMKHKLGGGQYGEVY----EGVWKK---------YSLTVAVKTLKEDTMEVEEFLKEA 61
Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
++K + HP L L I++EF + G+L + + + + A ++
Sbjct: 62 AVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQI 121
Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
A+EYL I+RDL N LV + + ++DF LS
Sbjct: 122 SSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS 159
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
G DL+++ Q + + +F ++L L+Y+H II+RDLKP N+ V D + +
Sbjct: 121 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKI 177
Query: 233 SDFDLS 238
DF L+
Sbjct: 178 LDFGLA 183
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 306 FVGTHEYVSPEVASGGSHGN-AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT 364
+V T Y +PE+ H N VD W+ G + E++ GRT F + L+ I++ T
Sbjct: 193 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 252
Query: 365 FPTQSPSSMSEYHARDLISGL 385
+ +S AR+ I L
Sbjct: 253 PGAELLKKISSESARNYIQSL 273
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 78/221 (35%), Gaps = 54/221 (24%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E I+ DHP + L I+ E+ G L + K RF++
Sbjct: 65 EASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKN-DGRFTVIQLVGMLR 123
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
+ ++YL + ++RDL N+LV S+ +SDF +S
Sbjct: 124 GIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMS-------------------R 164
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
Y+TR G K P R E +A R +
Sbjct: 165 VLEDDPEAAYTTR---------GGK-----IPIRWTAPEAIAYRKFT------------- 197
Query: 319 SGGSHGNAVDWWAFGIFIYE-MIYGRTPFAAPSNETTLRNI 358
+A D W++GI ++E M YG P+ SN+ ++ I
Sbjct: 198 ------SASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAI 232
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 111/285 (38%), Gaps = 43/285 (15%)
Query: 135 RAEMEKKILKMLDHPF---LPTLYAEFE--ASNFSCIVMEFCSGGDLHSLRHKQPHKRFS 189
R E ++L HP L ++ FE A + +V E DL + H Q S
Sbjct: 75 RVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRT-DLAQVIHDQ-RIVIS 132
Query: 190 LTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXX 249
+++ +L+ L LH G+++RDL P N+L+ + I + DF+L+ A
Sbjct: 133 PQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTA------ 186
Query: 250 XXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGT 309
Y R + +F G K+ + +AE + R F G+
Sbjct: 187 --------DANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAE-MFNRKALFRGS 237
Query: 310 HEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT--FPT 367
Y + N + I +++ +P A +L N+ + T PT
Sbjct: 238 TFY---------NQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPT 288
Query: 368 QSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGL 412
P ++ DLI+ +L +P R+ +++ HP+F+ L
Sbjct: 289 ADPVAL------DLIAKMLEFNPQRRISTEQAL----RHPYFESL 323
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 111/285 (38%), Gaps = 43/285 (15%)
Query: 135 RAEMEKKILKMLDHPF---LPTLYAEFE--ASNFSCIVMEFCSGGDLHSLRHKQPHKRFS 189
R E ++L HP L ++ FE A + +V E DL + H Q S
Sbjct: 75 RVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRT-DLAQVIHDQ-RIVIS 132
Query: 190 LTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXX 249
+++ +L+ L LH G+++RDL P N+L+ + I + DF+L+ A
Sbjct: 133 PQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTA------ 186
Query: 250 XXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGT 309
Y R + +F G K+ + +AE + R F G+
Sbjct: 187 --------DANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAE-MFNRKALFRGS 237
Query: 310 HEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT--FPT 367
Y + N + I +++ +P A +L N+ + T PT
Sbjct: 238 TFY---------NQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPT 288
Query: 368 QSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGL 412
P ++ DLI+ +L +P R+ +++ HP+F+ L
Sbjct: 289 ADPVAL------DLIAKMLEFNPQRRISTEQAL----RHPYFESL 323
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
G DL+++ Q + + +F ++L L+Y+H II+RDLKP N+ V D + +
Sbjct: 115 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKI 171
Query: 233 SDFDLS 238
DF L+
Sbjct: 172 LDFGLA 177
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 306 FVGTHEYVSPEVASGGSHGN-AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT 364
+V T Y +PE+ H N VD W+ G + E++ GRT F + L+ I++ T
Sbjct: 187 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 246
Query: 365 FPTQSPSSMSEYHARDLISGL 385
+ +S AR+ I L
Sbjct: 247 PGAELLKKISSESARNYIQSL 267
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
G DL+++ Q + + +F ++L L+Y+H II+RDLKP N+ V D + +
Sbjct: 115 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKI 171
Query: 233 SDFDLS 238
DF L+
Sbjct: 172 LDFGLA 177
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 306 FVGTHEYVSPEVASGGSHGN-AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT 364
+V T Y +PE+ H N VD W+ G + E++ GRT F + L+ I++ T
Sbjct: 187 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 246
Query: 365 FPTQSPSSMSEYHARDLISGL 385
+ +S AR+ I L
Sbjct: 247 PGAELLKKISSESARNYIQSL 267
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E +++ LD+P++ + EA ++ +VME G L+ ++ Q ++ +
Sbjct: 420 EANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLN--KYLQQNRHVKDKNIIELVH 476
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+V + ++YL ++RDL NVL+ + + +SDF LS
Sbjct: 477 QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLS 516
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E +++ LD+P++ + EA ++ +VME G L+ ++ Q ++ +
Sbjct: 421 EANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLN--KYLQQNRHVKDKNIIELVH 477
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+V + ++YL ++RDL NVL+ + + +SDF LS
Sbjct: 478 QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLS 517
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 70/161 (43%), Gaps = 20/161 (12%)
Query: 82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
+ L R+IG+G G +YL + + A + +E K
Sbjct: 9 YRLGRKIGSGSFGDIYLGT--------------DIAAGEEVAIKLECVKTKHPQLHIESK 54
Query: 142 ILKMLDHPF-LPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
I KM+ +PT+ +++ +VME G L L ++FSL + A ++
Sbjct: 55 IYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GPSLEDL-FNFCSRKFSLKTVLLLADQM 112
Query: 201 LVALEYLHMLGIIYRDLKPENVLV---RSDGHIMLSDFDLS 238
+ +EY+H I+RD+KP+N L+ + + + DF L+
Sbjct: 113 ISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLA 153
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 61/158 (38%), Gaps = 13/158 (8%)
Query: 81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEK 140
D + ++G G G VY +++ Y++ E
Sbjct: 19 DITMKHKLGGGQYGEVY----EGVWKK---------YSLTVAVKTLKEDTMEVEEFLKEA 65
Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
++K + HP L L I++EF + G+L + + + + A ++
Sbjct: 66 AVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQI 125
Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
A+EYL I+RDL N LV + + ++DF LS
Sbjct: 126 SSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS 163
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
G DL+++ Q + + +F ++L L+Y+H II+RDLKP N+ V D + +
Sbjct: 133 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 189
Query: 233 SDFDLS 238
DF L+
Sbjct: 190 LDFGLA 195
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 306 FVGTHEYVSPEVASGGSHGN-AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT 364
+V T Y +PE+ H N VD W+ G + E++ GRT F + L+ I++ T
Sbjct: 205 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 264
Query: 365 FPTQSPSSMSEYHARDLISGL 385
+ +S AR+ I L
Sbjct: 265 PGAELLKKISSESARNYIQSL 285
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
G DL+++ Q + + +F ++L L+Y+H II+RDLKP N+ V D + +
Sbjct: 122 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 178
Query: 233 SDFDLS 238
DF L+
Sbjct: 179 LDFGLA 184
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 306 FVGTHEYVSPEVASGGSHGN-AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT 364
+V T Y +PE+ H N VD W+ G + E++ GRT F + L+ I++ T
Sbjct: 194 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 253
Query: 365 FPTQSPSSMSEYHARDLISGL 385
+ +S AR+ I L
Sbjct: 254 PGAELLKKISSESARNYIQSL 274
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
G DL+++ Q + + +F ++L L+Y+H II+RDLKP N+ V D + +
Sbjct: 106 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 162
Query: 233 SDFDLS 238
DF L+
Sbjct: 163 LDFGLA 168
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 306 FVGTHEYVSPEVASGGSHGN-AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT 364
+V T Y +PE+ H N VD W+ G + E++ GRT F + L+ I++ T
Sbjct: 178 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 237
Query: 365 FPTQSPSSMSEYHARDLISGL 385
+ +S AR+ I L
Sbjct: 238 PGAELLKKISSESARNYIQSL 258
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 11/95 (11%)
Query: 151 LPTLYAEFEASNFSCIVMEFC--SGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLH 208
+P +Y ++ +V+E S DL L + FSL + A +++ +EY+H
Sbjct: 67 IPQVYYFGPCGKYNAMVLELLGPSLEDLFDL----CDRTFSLKTVLMIAIQLISRMEYVH 122
Query: 209 MLGIIYRDLKPENVLVRSDGH-----IMLSDFDLS 238
+IYRD+KPEN L+ G+ I + DF L+
Sbjct: 123 SKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFGLA 157
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
G DL+++ Q + + +F ++L L+Y+H II+RDLKP N+ V D + +
Sbjct: 110 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 233 SDFDLS 238
DF L+
Sbjct: 167 LDFGLA 172
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Query: 307 VGTHEYVSPEVASGGSHGN-AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTF 365
V T Y +PE+ H N VD W+ G + E++ GRT F + L+ I++ T
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 366 PTQSPSSMSEYHARDLISGL 385
+ +S AR+ I L
Sbjct: 243 GAELLKKISSESARNYIQSL 262
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
G DL+++ Q + + +F ++L L+Y+H II+RDLKP N+ V D + +
Sbjct: 117 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 173
Query: 233 SDFDLS 238
DF L+
Sbjct: 174 LDFGLA 179
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 41/92 (44%), Gaps = 1/92 (1%)
Query: 295 VAEPVAARSCSFVGTHEYVSPEVASGGSHGN-AVDWWAFGIFIYEMIYGRTPFAAPSNET 353
+A A +V T Y +PE+ H N VD W+ G + E++ GRT F +
Sbjct: 178 LARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 237
Query: 354 TLRNIVKKPLTFPTQSPSSMSEYHARDLISGL 385
L+ I++ T + +S AR+ I L
Sbjct: 238 QLKLILRLVGTPGAELLKKISSESARNYIQSL 269
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
G DL+++ Q + + +F ++L L+Y+H II+RDLKP N+ V D + +
Sbjct: 121 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 177
Query: 233 SDFDLS 238
DF L+
Sbjct: 178 LDFGLA 183
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 306 FVGTHEYVSPEVASGGSHGN-AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT 364
+V T Y +PE+ H N VD W+ G + E++ GRT F + L+ I++ T
Sbjct: 193 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 252
Query: 365 FPTQSPSSMSEYHARDLISGL 385
+ +S AR+ I L
Sbjct: 253 PGAELLKKISSESARNYIQSL 273
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
G DL+++ Q + + +F ++L L+Y+H II+RDLKP N+ V D + +
Sbjct: 112 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 168
Query: 233 SDFDLS 238
DF L+
Sbjct: 169 LDFGLA 174
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 306 FVGTHEYVSPEVASGGSHGN-AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT 364
+V T Y +PE+ H N VD W+ G + E++ GRT F + L+ I++ T
Sbjct: 184 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 243
Query: 365 FPTQSPSSMSEYHARDLISGL 385
+ +S AR+ I L
Sbjct: 244 PGAELLKKISSESARNYIQSL 264
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
G DL+++ Q + + +F ++L L+Y+H II+RDLKP N+ V D + +
Sbjct: 117 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 173
Query: 233 SDFDLS 238
DF L+
Sbjct: 174 LDFGLA 179
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 41/92 (44%), Gaps = 1/92 (1%)
Query: 295 VAEPVAARSCSFVGTHEYVSPEVASGGSHGN-AVDWWAFGIFIYEMIYGRTPFAAPSNET 353
+A A +V T Y +PE+ H N VD W+ G + E++ GRT F +
Sbjct: 178 LARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 237
Query: 354 TLRNIVKKPLTFPTQSPSSMSEYHARDLISGL 385
L+ I++ T + +S AR+ I L
Sbjct: 238 QLKLILRLVGTPGAELLKKISSESARNYIQSL 269
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
G DL+++ Q + + +F ++L L+Y+H II+RDLKP N+ V D + +
Sbjct: 110 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 233 SDFDLS 238
DF L+
Sbjct: 167 LDFGLA 172
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Query: 304 CSFVGTHEYVSPEVASGGSHGN-AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKP 362
FV T Y +PE+ H N VD W+ G + E++ GRT F + L+ I++
Sbjct: 180 AGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
Query: 363 LTFPTQSPSSMSEYHARDLISGL 385
T + +S AR+ I L
Sbjct: 240 GTPGAELLKKISSESARNYIQSL 262
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
G DL+++ Q + + +F ++L L+Y+H II+RDLKP N+ V D + +
Sbjct: 112 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 168
Query: 233 SDFDLS 238
DF L+
Sbjct: 169 LDFGLA 174
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 306 FVGTHEYVSPEVASGGSHGN-AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT 364
+V T Y +PE+ H N VD W+ G + E++ GRT F + L+ I++ T
Sbjct: 184 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 243
Query: 365 FPTQSPSSMSEYHARDLISGL 385
+ +S AR+ I L
Sbjct: 244 PGAELLKKISSESARNYIQSL 264
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
G DL+++ Q + + +F ++L L+Y+H II+RDLKP N+ V D + +
Sbjct: 110 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 233 SDFDLS 238
DF L+
Sbjct: 167 LDFGLA 172
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 306 FVGTHEYVSPEVASGGSHGN-AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT 364
+V T Y +PE+ H N VD W+ G + E++ GRT F + L+ I++ T
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 365 FPTQSPSSMSEYHARDLISGL 385
+ +S AR+ I L
Sbjct: 242 PGAELLKKISSESARNYIQSL 262
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
G DL+++ Q + + +F ++L L+Y+H II+RDLKP N+ V D + +
Sbjct: 110 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 233 SDFDLS 238
DF L+
Sbjct: 167 LDFGLA 172
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Query: 304 CSFVGTHEYVSPEVASGGSHGN-AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKP 362
FV T Y +PE+ H N VD W+ G + E++ GRT F + L+ I++
Sbjct: 180 AGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
Query: 363 LTFPTQSPSSMSEYHARDLISGL 385
T + +S AR+ I L
Sbjct: 240 GTPGAELLKKISSESARNYIQSL 262
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
G DL+++ Q + + +F ++L L+Y+H II+RDLKP N+ V D + +
Sbjct: 122 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 178
Query: 233 SDFDLS 238
DF L+
Sbjct: 179 LDFGLA 184
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 306 FVGTHEYVSPEVASGGSHGN-AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT 364
+V T Y +PE+ H N VD W+ G + E++ GRT F + L+ I++ T
Sbjct: 194 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 253
Query: 365 FPTQSPSSMSEYHARDLISGL 385
+ +S AR+ I L
Sbjct: 254 PGAELLKKISSESARNYIQSL 274
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
G DL+++ Q + + +F ++L L+Y+H II+RDLKP N+ V D + +
Sbjct: 107 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 163
Query: 233 SDFDLS 238
DF L+
Sbjct: 164 LDFGLA 169
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 306 FVGTHEYVSPEVASGGSHGN-AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT 364
+V T Y +PE+ H N VD W+ G + E++ GRT F + L+ I++ T
Sbjct: 179 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 238
Query: 365 FPTQSPSSMSEYHARDLISGL 385
+ +S AR+ I L
Sbjct: 239 PGAELLKKISSESARNYIQSL 259
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
G DL+++ Q + + +F ++L L+Y+H II+RDLKP N+ V D + +
Sbjct: 122 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 178
Query: 233 SDFDLS 238
DF L+
Sbjct: 179 LDFGLA 184
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 306 FVGTHEYVSPEVASGGSHGN-AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT 364
+V T Y +PE+ H N VD W+ G + E++ GRT F + L+ I++ T
Sbjct: 194 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 253
Query: 365 FPTQSPSSMSEYHARDLISGL 385
+ +S AR+ I L
Sbjct: 254 PGAELLKKISSESARNYIQSL 274
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
G DL+++ Q + + +F ++L L+Y+H II+RDLKP N+ V D + +
Sbjct: 115 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 171
Query: 233 SDFDLS 238
DF L+
Sbjct: 172 LDFGLA 177
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 306 FVGTHEYVSPEVASGGSHGN-AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT 364
+V T Y +PE+ H N VD W+ G + E++ GRT F + L+ I++ T
Sbjct: 187 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 246
Query: 365 FPTQSPSSMSEYHARDLISGL 385
+ +S AR+ I L
Sbjct: 247 PGAELLKKISSESARNYIQSL 267
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
G DL+++ Q + + +F ++L L+Y+H II+RDLKP N+ V D + +
Sbjct: 110 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 233 SDFDLS 238
DF L+
Sbjct: 167 LDFGLA 172
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 306 FVGTHEYVSPEVASGGSHGN-AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT 364
+V T Y +PE+ H N VD W+ G + E++ GRT F + L+ I++ T
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 365 FPTQSPSSMSEYHARDLISGL 385
+ +S AR+ I L
Sbjct: 242 PGAELLKKISSESARNYIQSL 262
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
G DL+++ Q + + +F ++L L+Y+H II+RDLKP N+ V D + +
Sbjct: 110 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 233 SDFDLS 238
DF L+
Sbjct: 167 LDFGLA 172
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 306 FVGTHEYVSPEVASGGSHGN-AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT 364
+V T Y +PE+ H N VD W+ G + E++ GRT F + L+ I++ T
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 365 FPTQSPSSMSEYHARDLISGL 385
+ +S AR+ I L
Sbjct: 242 PGAELLKKISSESARNYIQSL 262
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
G DL+++ Q + + +F ++L L+Y+H II+RDLKP N+ V D + +
Sbjct: 110 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 233 SDFDLS 238
DF L+
Sbjct: 167 LDFGLA 172
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 306 FVGTHEYVSPEVASGGSHGN-AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT 364
+V T Y +PE+ H N VD W+ G + E++ GRT F + L+ I++ T
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 365 FPTQSPSSMSEYHARDLISGL 385
+ +S AR+ I L
Sbjct: 242 PGAELLKKISSESARNYIQSL 262
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Query: 166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVR 225
+VME+ G SLR P L +A ++ + YLH I+RDL NVL+
Sbjct: 112 LVMEYVPLG---SLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLD 168
Query: 226 SDGHIMLSDFDLS 238
+D + + DF L+
Sbjct: 169 NDRLVKIGDFGLA 181
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
G DL+++ Q + + +F ++L L+Y+H II+RDLKP N+ V D + +
Sbjct: 108 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 164
Query: 233 SDFDLS 238
DF L+
Sbjct: 165 LDFGLA 170
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 306 FVGTHEYVSPEVASGGSHGN-AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT 364
+V T Y +PE+ H N VD W+ G + E++ GRT F + L+ I++ T
Sbjct: 180 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 239
Query: 365 FPTQSPSSMSEYHARDLISGL 385
+ +S AR+ I L
Sbjct: 240 PGAELLKKISSESARNYIQSL 260
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
G DL+++ Q + + +F ++L L+Y+H II+RDLKP N+ V D + +
Sbjct: 109 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 165
Query: 233 SDFDLS 238
DF L+
Sbjct: 166 LDFGLA 171
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 306 FVGTHEYVSPEVASGGSHGN-AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT 364
+V T Y +PE+ H N VD W+ G + E++ GRT F + L+ I++ T
Sbjct: 181 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 240
Query: 365 FPTQSPSSMSEYHARDLISGL 385
+ +S AR+ I L
Sbjct: 241 PGAELLKKISSESARNYIQSL 261
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
G DL+++ Q + + +F ++L L+Y+H II+RDLKP N+ V D + +
Sbjct: 107 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 163
Query: 233 SDFDLS 238
DF L+
Sbjct: 164 LDFGLA 169
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 306 FVGTHEYVSPEVASGGSHGN-AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT 364
+V T Y +PE+ H N VD W+ G + E++ GRT F + L+ I++ T
Sbjct: 179 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 238
Query: 365 FPTQSPSSMSEYHARDLISGL 385
+ +S AR+ I L
Sbjct: 239 PGAELLKKISSESARNYIQSL 259
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
G DL+++ Q + + +F ++L L+Y+H II+RDLKP N+ V D + +
Sbjct: 106 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 162
Query: 233 SDFDLS 238
DF L+
Sbjct: 163 LDFGLA 168
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 306 FVGTHEYVSPEVASGGSHGN-AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT 364
+V T Y +PE+ H N VD W+ G + E++ GRT F + L+ I++ T
Sbjct: 178 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 237
Query: 365 FPTQSPSSMSEYHARDLISGL 385
+ +S AR+ I L
Sbjct: 238 PGAELLKKISSESARNYIQSL 258
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
G DL+++ Q + + +F ++L L+Y+H II+RDLKP N+ V D + +
Sbjct: 120 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 176
Query: 233 SDFDLS 238
DF L+
Sbjct: 177 LDFGLA 182
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 306 FVGTHEYVSPEVASGGSHGN-AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT 364
+V T Y +PE+ H N VD W+ G + E++ GRT F + L+ I++ T
Sbjct: 192 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 251
Query: 365 FPTQSPSSMSEYHARDLISGL 385
+ +S AR+ I L
Sbjct: 252 PGAELLKKISSESARNYIQSL 272
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
G DL+++ Q + + +F ++L L+Y+H II+RDLKP N+ V D + +
Sbjct: 117 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 173
Query: 233 SDFDLS 238
DF L+
Sbjct: 174 LDFGLA 179
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 306 FVGTHEYVSPEVASGGSHGN-AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT 364
+V T Y +PE+ H N VD W+ G + E++ GRT F + L+ I++ T
Sbjct: 189 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 248
Query: 365 FPTQSPSSMSEYHARDLISGL 385
+ +S AR+ I L
Sbjct: 249 PGAELLKKISSESARNYIQSL 269
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
G DL+++ Q + + +F ++L L+Y+H II+RDLKP N+ V D + +
Sbjct: 117 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 173
Query: 233 SDFDLS 238
DF L+
Sbjct: 174 LDFGLA 179
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 41/92 (44%), Gaps = 1/92 (1%)
Query: 295 VAEPVAARSCSFVGTHEYVSPEVASGGSHGN-AVDWWAFGIFIYEMIYGRTPFAAPSNET 353
+A A +V T Y +PE+ H N VD W+ G + E++ GRT F +
Sbjct: 178 LARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 237
Query: 354 TLRNIVKKPLTFPTQSPSSMSEYHARDLISGL 385
L+ I++ T + +S AR+ I L
Sbjct: 238 QLKLILRLVGTPGAELLKKISSESARNYIQSL 269
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
G DL+++ Q + + +F ++L L+Y+H II+RDLKP N+ V D + +
Sbjct: 110 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 233 SDFDLS 238
DF L+
Sbjct: 167 LDFGLA 172
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 306 FVGTHEYVSPEVASGGSHGN-AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT 364
+V T Y +PE+ H N VD W+ G + E++ GRT F + L+ I++ T
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 365 FPTQSPSSMSEYHARDLISGL 385
+ +S AR+ I L
Sbjct: 242 PGAELLKKISSESARNYIQSL 262
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
G DL+++ Q + + +F ++L L+Y+H II+RDLKP N+ V D + +
Sbjct: 106 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 162
Query: 233 SDFDLS 238
DF L+
Sbjct: 163 LDFGLA 168
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Query: 304 CSFVGTHEYVSPEVASGGSHGN-AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKP 362
FV T Y +PE+ H N VD W+ G + E++ GRT F + L+ I++
Sbjct: 176 AGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 235
Query: 363 LTFPTQSPSSMSEYHARDLISGL 385
T + +S AR+ I L
Sbjct: 236 GTPGAELLKKISSESARNYIQSL 258
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
G DL+++ Q + + +F ++L L+Y+H II+RDLKP N+ V D + +
Sbjct: 110 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 233 SDFDLS 238
DF L+
Sbjct: 167 LDFGLA 172
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 306 FVGTHEYVSPEVASGGSHGN-AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT 364
+V T Y +PE+ H N VD W+ G + E++ GRT F + L+ I++ T
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 365 FPTQSPSSMSEYHARDLISGL 385
+ +S AR+ I L
Sbjct: 242 PGAELLKKISSESARNYIQSL 262
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
G DL+++ Q + + +F ++L L+Y+H II+RDLKP N+ V D + +
Sbjct: 112 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 168
Query: 233 SDFDLS 238
DF L+
Sbjct: 169 LDFGLA 174
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 306 FVGTHEYVSPEVASGGSHGN-AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT 364
+V T Y +PE+ H N VD W+ G + E++ GRT F + L+ I++ T
Sbjct: 184 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 243
Query: 365 FPTQSPSSMSEYHARDLISGL 385
+ +S AR+ I L
Sbjct: 244 PGAELLKKISSESARNYIQSL 264
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
G DL+++ Q + + +F ++L L+Y+H II+RDLKP N+ V D + +
Sbjct: 110 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 233 SDFDLS 238
DF L+
Sbjct: 167 LDFGLA 172
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 306 FVGTHEYVSPEVASGGSHGN-AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT 364
+V T Y +PE+ H N VD W+ G + E++ GRT F + L+ I++ T
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 365 FPTQSPSSMSEYHARDLISGL 385
+ +S AR+ I L
Sbjct: 242 PGAELLKKISSESARNYIQSL 262
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
G DL+++ Q + + +F ++L L+Y+H II+RDLKP N+ V D + +
Sbjct: 110 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 233 SDFDLS 238
DF L+
Sbjct: 167 LDFGLA 172
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 306 FVGTHEYVSPEVASGGSHGN-AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT 364
+V T Y +PE+ H N VD W+ G + E++ GRT F + L+ I++ T
Sbjct: 182 YVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 365 FPTQSPSSMSEYHARDLISGL 385
+ +S AR+ I L
Sbjct: 242 PGAELLKKISSESARNYIQSL 262
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
G DL+++ Q + + +F ++L L+Y+H II+RDLKP N+ V D + +
Sbjct: 110 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 233 SDFDLS 238
DF L+
Sbjct: 167 LDFGLA 172
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 306 FVGTHEYVSPEVASGGSHGN-AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT 364
+V T Y +PE+ H N VD W+ G + E++ GRT F + L+ I++ T
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 365 FPTQSPSSMSEYHARDLISGL 385
+ +S AR+ I L
Sbjct: 242 PGAELLKKISSESARNYIQSL 262
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
G DL+++ Q + + +F ++L L+Y+H II+RDLKP N+ V D + +
Sbjct: 129 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 185
Query: 233 SDFDLS 238
DF L+
Sbjct: 186 LDFGLA 191
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 306 FVGTHEYVSPEVASGGSHGN-AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT 364
+V T Y +PE+ H N VD W+ G + E++ GRT F + L+ I++ T
Sbjct: 201 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 260
Query: 365 FPTQSPSSMSEYHARDLISGL 385
+ +S AR+ I L
Sbjct: 261 PGAELLKKISSESARNYIQSL 281
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
G DL+++ Q + + +F ++L L+Y+H II+RDLKP N+ V D + +
Sbjct: 133 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 189
Query: 233 SDFDLS 238
DF L+
Sbjct: 190 LDFGLA 195
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 306 FVGTHEYVSPEVASGGSHGN-AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT 364
+V T Y +PE+ H N VD W+ G + E++ GRT F + L+ I++ T
Sbjct: 205 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 264
Query: 365 FPTQSPSSMSEYHARDLISGL 385
+ +S AR+ I L
Sbjct: 265 PGAELLKKISSESARNYIQSL 285
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
G DL+++ Q + + +F ++L L+Y+H II+RDLKP N+ V D + +
Sbjct: 130 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 186
Query: 233 SDFDLS 238
DF L+
Sbjct: 187 LDFGLA 192
Score = 36.6 bits (83), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Query: 307 VGTHEYVSPEVASGGSHGN-AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTF 365
V T Y +PE+ H N VD W+ G + E++ GRT F + L+ I++ T
Sbjct: 203 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 262
Query: 366 PTQSPSSMSEYHARDLISGL 385
+ +S AR+ I L
Sbjct: 263 GAELLKKISSESARNYIQSL 282
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
G DL+++ Q + + +F ++L L+Y+H II+RDLKP N+ V D + +
Sbjct: 130 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 186
Query: 233 SDFDLS 238
DF L+
Sbjct: 187 LDFGLA 192
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 306 FVGTHEYVSPEVASGGSHGN-AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT 364
+V T Y +PE+ H N VD W+ G + E++ GRT F + L+ I++ T
Sbjct: 202 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 261
Query: 365 FPTQSPSSMSEYHARDLISGL 385
+ +S AR+ I L
Sbjct: 262 PGAELLKKISSESARNYIQSL 282
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
G DL+++ Q + + +F ++L L+Y+H II+RDLKP N+ V D + +
Sbjct: 115 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 171
Query: 233 SDFDLS 238
DF L+
Sbjct: 172 LDFGLA 177
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 306 FVGTHEYVSPEVASGGSHGN-AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT 364
+V T Y +PE+ H N VD W+ G + E++ GRT F + L+ I++ T
Sbjct: 187 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 246
Query: 365 FPTQSPSSMSEYHARDLISGL 385
+ +S AR+ I L
Sbjct: 247 PGAELLKKISSESARNYIQSL 267
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
G DL+++ Q + + +F ++L L+Y+H II+RDLKP N+ V D + +
Sbjct: 129 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 185
Query: 233 SDFDLS 238
DF L+
Sbjct: 186 LDFGLA 191
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 306 FVGTHEYVSPEVASGGSHGN-AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT 364
+V T Y +PE+ H N VD W+ G + E++ GRT F + L+ I++ T
Sbjct: 201 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 260
Query: 365 FPTQSPSSMSEYHARDLISGL 385
+ +S AR+ I L
Sbjct: 261 PGAELLKKISSESARNYIQSL 281
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
G DL+++ Q + + +F ++L L+Y+H II+RDLKP N+ V D + +
Sbjct: 116 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 172
Query: 233 SDFDLS 238
DF L+
Sbjct: 173 LDFGLA 178
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 306 FVGTHEYVSPEVASGGSHGN-AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT 364
+V T Y +PE+ H N VD W+ G + E++ GRT F + L+ I++ T
Sbjct: 188 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 247
Query: 365 FPTQSPSSMSEYHARDLISGL 385
+ +S AR+ I L
Sbjct: 248 PGAELLKKISSESARNYIQSL 268
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
G DL+++ Q + + +F ++L L+Y+H II+RDLKP N+ V D + +
Sbjct: 130 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 186
Query: 233 SDFDLS 238
DF L+
Sbjct: 187 LDFGLA 192
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 306 FVGTHEYVSPEVASGGSHGN-AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT 364
+V T Y +PE+ H N VD W+ G + E++ GRT F + L+ I++ T
Sbjct: 202 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 261
Query: 365 FPTQSPSSMSEYHARDLISGL 385
+ +S AR+ I L
Sbjct: 262 PGAELLKKISSESARNYIQSL 282
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 56/120 (46%), Gaps = 15/120 (12%)
Query: 134 HRAEMEKKILKMLDHPFLPTLYAEFEAS--NFSCIVM--EFCSGGDLHSLRHKQPHKRFS 189
R + E + LK L HP + Y +E++ CIV+ E + G L K KRF
Sbjct: 70 QRFKEEAEXLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTL-----KTYLKRFK 124
Query: 190 LTSA---RFYAAEVLVALEYLHMLG--IIYRDLKPENVLVRS-DGHIMLSDFDLSLCSNA 243
+ R + ++L L++LH II+RDLK +N+ + G + + D L+ A
Sbjct: 125 VXKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA 184
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Query: 197 AAEVLVALEYLH-MLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
A ++ ALE+LH L +I+RD+KP NVL+ + G + + DF +S
Sbjct: 115 AVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGIS 157
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
G DL+++ Q + + +F ++L L+Y+H II+RDLKP N+ V D + +
Sbjct: 116 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 172
Query: 233 SDFDLS 238
DF L+
Sbjct: 173 LDFGLA 178
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 306 FVGTHEYVSPEVASGGSHGN-AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT 364
+V T Y +PE+ H N VD W+ G + E++ GRT F + L+ I++ T
Sbjct: 188 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 247
Query: 365 FPTQSPSSMSEYHARDLISGL 385
+ +S AR+ I L
Sbjct: 248 PGAELLKKISSESARNYIQSL 268
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E +++K + H L LYA IV E+ S G L + K L AA
Sbjct: 63 EAQVMKKIRHEKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA 121
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
++ + Y+ + ++RDL+ N+LV + ++DF L+
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 161
Score = 34.7 bits (78), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 7/85 (8%)
Query: 311 EYVSPEVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKK-PLTFPTQ 368
++ +PE A G D W+FGI + E+ GR P+ N L + + + P +
Sbjct: 180 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE 239
Query: 369 SPSSMSEYHARDLISGLLNKDPCNR 393
P S+ DL+ KDP R
Sbjct: 240 CPESL-----HDLMCQCWRKDPEER 259
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
G DL+++ Q + + +F ++L L+Y+H II+RDLKP N+ V D + +
Sbjct: 116 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 172
Query: 233 SDFDLS 238
DF L+
Sbjct: 173 LDFGLA 178
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 306 FVGTHEYVSPEVASGGSHGN-AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT 364
+V T Y +PE+ H N VD W+ G + E++ GRT F + L+ I++ T
Sbjct: 188 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 247
Query: 365 FPTQSPSSMSEYHARDLISGL 385
+ +S AR+ I L
Sbjct: 248 PGAELLKKISSESARNYIQSL 268
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 75/350 (21%), Positives = 120/350 (34%), Gaps = 99/350 (28%)
Query: 87 RIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKKILKML 146
+IG G GTV+ K + HE L + A E +LK L
Sbjct: 9 KIGEGTYGTVF------KAKNRETHEIVALKRVRLDDDDEGVPSS----ALREICLLKEL 58
Query: 147 DHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEY 206
H + L+ + +V EFC DL + + + ++L L +
Sbjct: 59 KHKNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKY-FDSCNGDLDPEIVKSFLFQLLKGLGF 116
Query: 207 LHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYTR 266
H +++RDLKP+N+L+ +G + L++F L+
Sbjct: 117 CHSRNVLHRDLKPQNLLINRNGELKLANFGLA---------------------------- 148
Query: 267 QYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGS-HGN 325
R FG P R + AE V T Y P+V G +
Sbjct: 149 -----------RAFG-------IPVRCYSAE---------VVTLWYRPPDVLFGAKLYST 181
Query: 326 AVDWWAFGIFIYEMI-YGRTPFAAPSNETTLRNIVKKPLTFPTQ----SPSSMSEYH--- 377
++D W+ G E+ GR F + L+ I + L PT+ S + + +Y
Sbjct: 182 SIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRL-LGTPTEEQWPSMTKLPDYKPYP 240
Query: 378 ------------------ARDLISGLLNKDPCNRLGSKRGAADVKTHPFF 409
RDL+ LL +P R+ A + HP+F
Sbjct: 241 MYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRI----SAEEALQHPYF 286
>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZS|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZT|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZU|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
Length = 330
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 11/95 (11%)
Query: 151 LPTLYAEFEASNFSCIVMEFC--SGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLH 208
+P +Y ++ +V+E S DL L + FSL + A +++ +EY+H
Sbjct: 67 IPQVYYFGPCGKYNAMVLELLGPSLEDLFDL----CDRTFSLKTVLMIAIQLISRMEYVH 122
Query: 209 MLGIIYRDLKPENVLVRSDGH-----IMLSDFDLS 238
+IYRD+KPEN L+ G+ I + DF L+
Sbjct: 123 SKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALA 157
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 71/330 (21%), Positives = 110/330 (33%), Gaps = 82/330 (24%)
Query: 80 RDFDLHRRIGAGDIGTVYLCSLNNKY-RQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEM 138
RD L +G G G V+L +N QD+ L A+ R
Sbjct: 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDK-----MLVAVKALKEASESARQDFQR--- 92
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHS-LRHKQPHKRF--------- 188
E ++L ML H + + +V E+ GDL+ LR P +
Sbjct: 93 EAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAP 152
Query: 189 ---SLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIX 245
L A++V + YL L ++RDL N LV + + DF +S
Sbjct: 153 GPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMS------- 205
Query: 246 XXXXXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCS 305
YST R R T+ P R E + R +
Sbjct: 206 -------------------RDIYSTDYYRVGGR--------TMLPIRWMPPESILYRKFT 238
Query: 306 FVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTLRNIVK-KPL 363
D W+FG+ ++E+ YG+ P+ SN + I + + L
Sbjct: 239 -------------------TESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGREL 279
Query: 364 TFPTQSPSSMSEYHARDLISGLLNKDPCNR 393
P P E +A ++ G ++P R
Sbjct: 280 ERPRACP---PEVYA--IMRGCWQREPQQR 304
>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3
Length = 351
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 11/95 (11%)
Query: 151 LPTLYAEFEASNFSCIVMEFC--SGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLH 208
+P +Y ++ +V+E S DL L + FSL + A +++ +EY+H
Sbjct: 88 IPQVYYFGPCGKYNAMVLELLGPSLEDLFDL----CDRTFSLKTVLMIAIQLISRMEYVH 143
Query: 209 MLGIIYRDLKPENVLVRSDGH-----IMLSDFDLS 238
+IYRD+KPEN L+ G+ I + DF L+
Sbjct: 144 SKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALA 178
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E +++K L H L LYA IV E+ S G L + K L AA
Sbjct: 63 EAQVMKKLRHEKLVQLYAVVSEEPIY-IVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAA 121
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
++ + Y+ + ++RDL+ N+LV + ++DF L+
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 161
Score = 35.0 bits (79), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 7/85 (8%)
Query: 311 EYVSPEVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKK-PLTFPTQ 368
++ +PE A G D W+FGI + E+ GR P+ N L + + + P +
Sbjct: 180 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE 239
Query: 369 SPSSMSEYHARDLISGLLNKDPCNR 393
P S+ DL+ KDP R
Sbjct: 240 CPESL-----HDLMCQCWRKDPEER 259
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 60/158 (37%), Gaps = 13/158 (8%)
Query: 81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEK 140
D + ++G G G VY +++ Y++ E
Sbjct: 19 DITMKHKLGGGQYGEVY----EGVWKK---------YSLTVAVKTLKEDTMEVEEFLKEA 65
Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
++K + HP L L I+ EF + G+L + + + + A ++
Sbjct: 66 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQI 125
Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
A+EYL I+RDL N LV + + ++DF LS
Sbjct: 126 SSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS 163
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E +++K L H L LYA IV E+ S G L + K L AA
Sbjct: 63 EAQVMKKLRHEKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA 121
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
++ + Y+ + ++RDL N+LV + ++DF L+
Sbjct: 122 QIASGMAYVERMNYVHRDLAAANILVGENLVCKVADFGLA 161
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 7/85 (8%)
Query: 311 EYVSPEVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKK-PLTFPTQ 368
++ +PE A G D W+FGI + E+ GR P+ N L + + + P +
Sbjct: 180 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE 239
Query: 369 SPSSMSEYHARDLISGLLNKDPCNR 393
P S+ DL+ KDP R
Sbjct: 240 CPESL-----HDLMCQCWRKDPEER 259
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 60/158 (37%), Gaps = 13/158 (8%)
Query: 81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEK 140
D + ++G G G VY +++ Y++ E
Sbjct: 19 DITMKHKLGGGQYGEVY----EGVWKK---------YSLTVAVKTLKEDTMEVEEFLKEA 65
Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
++K + HP L L I+ EF + G+L + + + + A ++
Sbjct: 66 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQI 125
Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
A+EYL I+RDL N LV + + ++DF LS
Sbjct: 126 SSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS 163
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/242 (20%), Positives = 81/242 (33%), Gaps = 69/242 (28%)
Query: 146 LDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHS-LRHKQPHKRFSLTSAR---------- 194
L HP + L ++ +CS GDLH L + PH T
Sbjct: 86 LQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPP 145
Query: 195 ---FYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXX 251
A++ +EYL ++++DL NVLV ++ +SD L
Sbjct: 146 DFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLF------------- 192
Query: 252 XXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE 311
+ Y Y L +L P R
Sbjct: 193 ---------REVYAADYYKLLG------------NSLLPIR------------------- 212
Query: 312 YVSPEVASGGSHGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTLRNIV-KKPLTFPTQS 369
+++PE G D W++G+ ++E+ YG P+ SN+ + I ++ L P
Sbjct: 213 WMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLPCPDDC 272
Query: 370 PS 371
P+
Sbjct: 273 PA 274
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 60/158 (37%), Gaps = 13/158 (8%)
Query: 81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEK 140
D + ++G G G VY +++ Y++ E
Sbjct: 15 DITMKHKLGGGQYGEVY----EGVWKK---------YSLTVAVKTLKEDTMEVEEFLKEA 61
Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
++K + HP L L I+ EF + G+L + + + + A ++
Sbjct: 62 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQI 121
Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
A+EYL I+RDL N LV + + ++DF LS
Sbjct: 122 SSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS 159
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 11/95 (11%)
Query: 151 LPTLYAEFEASNFSCIVMEFC--SGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLH 208
+P +Y ++ +V+E S DL L + F+L + A +++ +EY+H
Sbjct: 62 VPQVYYFGPXGKYNAMVLELLGPSLEDLFDLCDRT----FTLKTVLMIAIQLITRMEYVH 117
Query: 209 MLGIIYRDLKPENVLVRSDG-----HIMLSDFDLS 238
+IYRD+KPEN LV G I + DF L+
Sbjct: 118 TKSLIYRDVKPENFLVGRPGTKRQHAIHIIDFGLA 152
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E +++ LD+P++ + EA ++ +VME G L+ ++ Q ++ +
Sbjct: 62 EANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLN--KYLQQNRHVKDKNIIELVH 118
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+V + ++YL ++RDL NVL+ + + +SDF LS
Sbjct: 119 QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLS 158
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 60/158 (37%), Gaps = 13/158 (8%)
Query: 81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEK 140
D + ++G G G VY +++ Y++ E
Sbjct: 18 DITMKHKLGGGQYGEVY----EGVWKK---------YSLTVAVKTLKEDTMEVEEFLKEA 64
Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
++K + HP L L I+ EF + G+L + + + + A ++
Sbjct: 65 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQI 124
Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
A+EYL I+RDL N LV + + ++DF LS
Sbjct: 125 SSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS 162
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 57/158 (36%), Gaps = 13/158 (8%)
Query: 81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEK 140
D + ++G G G VY Y++ E
Sbjct: 221 DITMKHKLGGGQYGEVYEGVWKK-------------YSLTVAVKTLKEDTMEVEEFLKEA 267
Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
++K + HP L L I+ EF + G+L + + S + A ++
Sbjct: 268 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQI 327
Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
A+EYL I+R+L N LV + + ++DF LS
Sbjct: 328 SSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLS 365
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 60/158 (37%), Gaps = 13/158 (8%)
Query: 81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEK 140
D + ++G G G VY +++ Y++ E
Sbjct: 19 DITMKHKLGGGQYGEVY----EGVWKK---------YSLTVAVKTLKEDTMEVEEFLKEA 65
Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
++K + HP L L I+ EF + G+L + + + + A ++
Sbjct: 66 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQI 125
Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
A+EYL I+RDL N LV + + ++DF LS
Sbjct: 126 SSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS 163
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/242 (20%), Positives = 81/242 (33%), Gaps = 69/242 (28%)
Query: 146 LDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHS-LRHKQPHKRFSLTSAR---------- 194
L HP + L ++ +CS GDLH L + PH T
Sbjct: 69 LQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPP 128
Query: 195 ---FYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXX 251
A++ +EYL ++++DL NVLV ++ +SD L
Sbjct: 129 DFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLF------------- 175
Query: 252 XXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE 311
+ Y Y L +L P R
Sbjct: 176 ---------REVYAADYYKLLG------------NSLLPIR------------------- 195
Query: 312 YVSPEVASGGSHGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTLRNIV-KKPLTFPTQS 369
+++PE G D W++G+ ++E+ YG P+ SN+ + I ++ L P
Sbjct: 196 WMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLPCPDDC 255
Query: 370 PS 371
P+
Sbjct: 256 PA 257
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 60/158 (37%), Gaps = 13/158 (8%)
Query: 81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEK 140
D + ++G G G VY +++ Y++ E
Sbjct: 16 DITMKHKLGGGQYGEVY----EGVWKK---------YSLTVAVKTLKEDTMEVEEFLKEA 62
Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
++K + HP L L I+ EF + G+L + + + + A ++
Sbjct: 63 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQI 122
Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
A+EYL I+RDL N LV + + ++DF LS
Sbjct: 123 SSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS 160
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E +++ LD+P++ + EA ++ +VME G L+ ++ Q ++ +
Sbjct: 62 EANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLN--KYLQQNRHVKDKNIIELVH 118
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+V + ++YL ++RDL NVL+ + + +SDF LS
Sbjct: 119 QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLS 158
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 86/239 (35%), Gaps = 53/239 (22%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E I+ DHP + L S I+ EF G L S +Q +F++
Sbjct: 58 EASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFL-RQNDGQFTVIQLVGMLR 116
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
+ ++YL + ++R L N+LV S+ +SDF LS
Sbjct: 117 GIAAGMKYLADMNYVHRALAARNILVNSNLVCKVSDFGLS------------------RF 158
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
T Y++ L G K P R E + R +
Sbjct: 159 LEDDTSDPTYTSAL--------GGK-----IPIRWTAPEAIQYRKFT------------- 192
Query: 319 SGGSHGNAVDWWAFGIFIYE-MIYGRTPFAAPSNETTLRNIVKK-PLTFPTQSPSSMSE 375
+A D W++GI ++E M YG P+ +N+ + I + L P PS++ +
Sbjct: 193 ------SASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPPMDCPSALHQ 245
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 60/158 (37%), Gaps = 13/158 (8%)
Query: 81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEK 140
D + ++G G G VY +++ Y++ E
Sbjct: 14 DITMKHKLGGGQYGEVY----EGVWKK---------YSLTVAVKTLKEDTMEVEEFLKEA 60
Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
++K + HP L L I+ EF + G+L + + + + A ++
Sbjct: 61 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQI 120
Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
A+EYL I+RDL N LV + + ++DF LS
Sbjct: 121 SSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS 158
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E +++ LD+P++ + EA ++ +VME G L+ ++ Q ++ +
Sbjct: 78 EANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLN--KYLQQNRHVKDKNIIELVH 134
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+V + ++YL ++RDL NVL+ + + +SDF LS
Sbjct: 135 QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLS 174
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E +++ LD+P++ + EA ++ +VME G L+ ++ Q ++ +
Sbjct: 78 EANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLN--KYLQQNRHVKDKNIIELVH 134
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+V + ++YL ++RDL NVL+ + + +SDF LS
Sbjct: 135 QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLS 174
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
G DL+++ Q + + +F ++L L+Y+H II+RDLKP N+ V D + +
Sbjct: 110 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 233 SDFDLS 238
DF L+
Sbjct: 167 LDFYLA 172
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 41/93 (44%), Gaps = 1/93 (1%)
Query: 294 FVAEPVAARSCSFVGTHEYVSPEVASGGSHGN-AVDWWAFGIFIYEMIYGRTPFAAPSNE 352
++A +V T Y +PE+ H N VD W+ G + E++ GRT F +
Sbjct: 170 YLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
Query: 353 TTLRNIVKKPLTFPTQSPSSMSEYHARDLISGL 385
L+ I++ T + +S AR+ I L
Sbjct: 230 DQLKLILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E +++ LD+P++ + EA ++ +VME G L+ ++ Q ++ +
Sbjct: 56 EANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLN--KYLQQNRHVKDKNIIELVH 112
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+V + ++YL ++RDL NVL+ + + +SDF LS
Sbjct: 113 QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLS 152
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E +++ LD+P++ + EA ++ +VME G L+ ++ Q ++ +
Sbjct: 76 EANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLN--KYLQQNRHVKDKNIIELVH 132
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+V + ++YL ++RDL NVL+ + + +SDF LS
Sbjct: 133 QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLS 172
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E +++ LD+P++ + EA ++ +VME G L+ ++ Q ++ +
Sbjct: 68 EANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLN--KYLQQNRHVKDKNIIELVH 124
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+V + ++YL ++RDL NVL+ + + +SDF LS
Sbjct: 125 QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLS 164
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 60/155 (38%), Gaps = 15/155 (9%)
Query: 84 LHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKKIL 143
L +++GAG G V++ + N H + M E ++
Sbjct: 186 LEKKLGAGQFGEVWMATYNK-------HTKVAVKTMKPGSMSVEAFLA-------EANVM 231
Query: 144 KMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVA 203
K L H L L+A I+ EF + G L + L ++A++
Sbjct: 232 KTLQHDKLVKLHAVVTKEPI-YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEG 290
Query: 204 LEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ ++ I+RDL+ N+LV + ++DF L+
Sbjct: 291 MAFIEQRNYIHRDLRAANILVSASLVCKIADFGLA 325
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 311 EYVSPEVASGGSHGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTLRNI 358
++ +PE + GS D W+FGI + E++ YGR P+ SN +R +
Sbjct: 334 KWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRAL 382
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Query: 197 AAEVLVALEYLH-MLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
A ++ ALE+LH L +I+RD+KP NVL+ + G + DF +S
Sbjct: 142 AVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKXCDFGIS 184
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 60/158 (37%), Gaps = 13/158 (8%)
Query: 81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEK 140
D + ++G G G VY +++ Y++ E
Sbjct: 14 DITMKHKLGGGQYGEVY----EGVWKK---------YSLTVAVKTLKEDTMEVEEFLKEA 60
Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
++K + HP L L I+ EF + G+L + + + + A ++
Sbjct: 61 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQI 120
Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
A+EYL I+RDL N LV + + ++DF LS
Sbjct: 121 SSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS 158
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E +++ LD+P++ + EA ++ +VME G L+ ++ Q ++ +
Sbjct: 58 EANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLN--KYLQQNRHVKDKNIIELVH 114
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+V + ++YL ++RDL NVL+ + + +SDF LS
Sbjct: 115 QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLS 154
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 60/155 (38%), Gaps = 15/155 (9%)
Query: 84 LHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKKIL 143
L +++GAG G V++ + N H + M E ++
Sbjct: 192 LEKKLGAGQFGEVWMATYNK-------HTKVAVKTMKPGSMSVEAFLA-------EANVM 237
Query: 144 KMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVA 203
K L H L L+A I+ EF + G L + L ++A++
Sbjct: 238 KTLQHDKLVKLHAVVTKEPI-YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEG 296
Query: 204 LEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ ++ I+RDL+ N+LV + ++DF L+
Sbjct: 297 MAFIEQRNYIHRDLRAANILVSASLVCKIADFGLA 331
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 311 EYVSPEVASGGSHGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTLRNI 358
++ +PE + GS D W+FGI + E++ YGR P+ SN +R +
Sbjct: 350 KWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRAL 398
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 71/330 (21%), Positives = 110/330 (33%), Gaps = 82/330 (24%)
Query: 80 RDFDLHRRIGAGDIGTVYLCSLNNKY-RQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEM 138
RD L +G G G V+L +N QD+ L A+ R
Sbjct: 12 RDIVLKWELGEGAFGKVFLAECHNLLPEQDK-----MLVAVKALKEASESARQDFQR--- 63
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHS-LRHKQPHKRF--------- 188
E ++L ML H + + +V E+ GDL+ LR P +
Sbjct: 64 EAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAP 123
Query: 189 ---SLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIX 245
L A++V + YL L ++RDL N LV + + DF +S
Sbjct: 124 GPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMS------- 176
Query: 246 XXXXXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCS 305
YST R R T+ P R E + R +
Sbjct: 177 -------------------RDIYSTDYYRVGGR--------TMLPIRWMPPESILYRKFT 209
Query: 306 FVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTLRNIVK-KPL 363
D W+FG+ ++E+ YG+ P+ SN + I + + L
Sbjct: 210 -------------------TESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGREL 250
Query: 364 TFPTQSPSSMSEYHARDLISGLLNKDPCNR 393
P P E +A ++ G ++P R
Sbjct: 251 ERPRACP---PEVYA--IMRGCWQREPQQR 275
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 57/158 (36%), Gaps = 13/158 (8%)
Query: 81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEK 140
D + ++G G G VY+ Y++ E
Sbjct: 33 DITMKHKLGGGQYGEVYVGVWKK-------------YSLTVAVKTLKEDTMEVEEFLKEA 79
Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
++K + HP L L IV E+ G+L + + + + A ++
Sbjct: 80 AVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQI 139
Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
A+EYL I+RDL N LV + + ++DF LS
Sbjct: 140 SSAMEYLEKKNFIHRDLAARNCLVGENHVVKVADFGLS 177
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 45/100 (45%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E ++K + HP L L I+ EF + G+L + + + + A
Sbjct: 61 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 120
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
++ A+EYL I+RDL N LV + + ++DF LS
Sbjct: 121 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS 160
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 60/158 (37%), Gaps = 13/158 (8%)
Query: 81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEK 140
D + ++G G G VY +++ Y++ E
Sbjct: 27 DITMKHKLGGGQYGEVY----EGVWKK---------YSLTVAVKTLKEDTMEVEEFLKEA 73
Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
++K + HP L L I+ EF + G+L + + + + A ++
Sbjct: 74 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQI 133
Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
A+EYL I+RDL N LV + + ++DF LS
Sbjct: 134 SSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS 171
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 60/158 (37%), Gaps = 13/158 (8%)
Query: 81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEK 140
D + ++G G G VY +++ Y++ E
Sbjct: 16 DITMKHKLGGGQYGEVY----EGVWKK---------YSLTVAVKTLKEDTMEVEEFLKEA 62
Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
++K + HP L L I+ EF + G+L + + + + A ++
Sbjct: 63 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQI 122
Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
A+EYL I+RDL N LV + + ++DF LS
Sbjct: 123 SSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS 160
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/335 (20%), Positives = 112/335 (33%), Gaps = 83/335 (24%)
Query: 80 RDFDLHRRIGAGDIGTVYLCSLNNKY-RQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEM 138
RD L R +G G G V+L N +D+ L A+ R
Sbjct: 15 RDIVLKRELGEGAFGKVFLAECYNLSPTKDK-----MLVAVKALKDPTLAARKDFQR--- 66
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSL--------------RHKQP 184
E ++L L H + Y + +V E+ GDL+ + +Q
Sbjct: 67 EAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQA 126
Query: 185 HKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAI 244
L+ A+++ + YL ++RDL N LV ++ + + DF +S
Sbjct: 127 KGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMS------ 180
Query: 245 XXXXXXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSC 304
Y+ Y R G T+ P R E + R
Sbjct: 181 ----------------RDVYSTDYY--------RVGG----HTMLPIRWMPPESIMYRKF 212
Query: 305 SFVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTLRNIVK-KP 362
+ D W+FG+ ++E+ YG+ P+ SN + I + +
Sbjct: 213 T-------------------TESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRV 253
Query: 363 LTFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSK 397
L P P + D++ G ++P RL K
Sbjct: 254 LERPRVCPKEVY-----DVMLGCWQREPQQRLNIK 283
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E +++K L H L LYA IV E+ + G L + K L +A
Sbjct: 60 EAQVMKKLRHEKLVQLYAVVSEEPIY-IVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSA 118
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
++ + Y+ + ++RDL+ N+LV + ++DF L+
Sbjct: 119 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 158
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 7/85 (8%)
Query: 311 EYVSPEVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKK-PLTFPTQ 368
++ +PE A G D W+FGI + E+ GR P+ N L + + + P +
Sbjct: 177 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE 236
Query: 369 SPSSMSEYHARDLISGLLNKDPCNR 393
P S+ DL+ K+P R
Sbjct: 237 CPESL-----HDLMCQCWRKEPEER 256
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
G DL+++ Q + + +F ++L L+Y+H II+RDLKP N+ V D + +
Sbjct: 110 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 233 SDFDLS 238
D+ L+
Sbjct: 167 LDYGLA 172
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 306 FVGTHEYVSPEVASGGSHGN-AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT 364
+V T Y +PE+ H N VD W+ G + E++ GRT F + L+ I++ T
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 365 FPTQSPSSMSEYHARDLISGL 385
+ +S AR+ I L
Sbjct: 242 PGAELLKKISSESARNYIQSL 262
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/157 (21%), Positives = 60/157 (38%), Gaps = 15/157 (9%)
Query: 82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
L +++GAG G V++ + N H + M E
Sbjct: 17 LKLEKKLGAGQFGEVWMATYNK-------HTKVAVKTMKPGSMSVEAFLA-------EAN 62
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
++K L H L L+A I+ EF + G L + L ++A++
Sbjct: 63 VMKTLQHDKLVKLHAVVTKEPI-YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIA 121
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ ++ I+RDL+ N+LV + ++DF L+
Sbjct: 122 EGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLA 158
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 311 EYVSPEVASGGSHGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTLRNI 358
++ +PE + GS D W+FGI + E++ YGR P+ SN +R +
Sbjct: 177 KWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRAL 225
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E +++K L H L LYA IV E+ + G L + K L +A
Sbjct: 60 EAQVMKKLRHEKLVQLYAVVSEEPIY-IVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSA 118
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
++ + Y+ + ++RDL+ N+LV + ++DF L+
Sbjct: 119 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 158
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 7/85 (8%)
Query: 311 EYVSPEVASGGSHGNAVDWWAFGIFIYEMIY-GRTPFAAPSNETTLRNIVKK-PLTFPTQ 368
++ +PE A G D W+FGI + E+ GR P+ N L + + + P +
Sbjct: 177 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE 236
Query: 369 SPSSMSEYHARDLISGLLNKDPCNR 393
P S+ DL+ K+P R
Sbjct: 237 CPESL-----HDLMCQCWRKEPEER 256
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 69/166 (41%), Gaps = 21/166 (12%)
Query: 80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEME 139
R +++G G+ G+V +C + QD E + + E E
Sbjct: 41 RHLKFLQQLGKGNFGSVEMCRYDP--LQDNTGEVVAVKKLQHSTEEHLRDF------ERE 92
Query: 140 KKILKMLDHPFLPTLYAEFEASNFSC------IVMEFCSGGDLHSLRHKQPHK-RFSLTS 192
+ILK L H + +++ +S ++ME+ G L + Q HK R
Sbjct: 93 IEILKSLQHDNI----VKYKGVCYSAGRRNLKLIMEYLPYGSLRD--YLQKHKERIDHIK 146
Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
Y +++ +EYL I+RDL N+LV ++ + + DF L+
Sbjct: 147 LLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 192
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 70/171 (40%), Gaps = 21/171 (12%)
Query: 75 TGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXH 134
T R +++G G+ G+V +C + QD E + +
Sbjct: 3 TQFEERHLKFLQQLGKGNFGSVEMCRYDP--LQDNTGEVVAVKKLQHSTEEHLRDF---- 56
Query: 135 RAEMEKKILKMLDHPFLPTLYAEFEASNFSC------IVMEFCSGGDLHSLRHKQPHK-R 187
E E +ILK L H + +++ +S ++ME+ G L + Q HK R
Sbjct: 57 --EREIEILKSLQHDNI----VKYKGVCYSAGRRNLKLIMEYLPYGSLRD--YLQKHKER 108
Query: 188 FSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
Y +++ +EYL I+RDL N+LV ++ + + DF L+
Sbjct: 109 IDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 159
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 70/171 (40%), Gaps = 21/171 (12%)
Query: 75 TGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXH 134
T R +++G G+ G+V +C + QD E + +
Sbjct: 5 TQFEERHLKFLQQLGKGNFGSVEMCRYDP--LQDNTGEVVAVKKLQHSTEEHLRDF---- 58
Query: 135 RAEMEKKILKMLDHPFLPTLYAEFEASNFSC------IVMEFCSGGDLHSLRHKQPHK-R 187
E E +ILK L H + +++ +S ++ME+ G L + Q HK R
Sbjct: 59 --EREIEILKSLQHDNI----VKYKGVCYSAGRRNLKLIMEYLPYGSLRD--YLQKHKER 110
Query: 188 FSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
Y +++ +EYL I+RDL N+LV ++ + + DF L+
Sbjct: 111 IDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 161
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 71/330 (21%), Positives = 110/330 (33%), Gaps = 82/330 (24%)
Query: 80 RDFDLHRRIGAGDIGTVYLCSLNNKY-RQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEM 138
RD L +G G G V+L +N QD+ L A+ R
Sbjct: 18 RDIVLKWELGEGAFGKVFLAECHNLLPEQDK-----MLVAVKALKEASESARQDFQR--- 69
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHS-LRHKQPHKRF--------- 188
E ++L ML H + + +V E+ GDL+ LR P +
Sbjct: 70 EAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAP 129
Query: 189 ---SLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIX 245
L A++V + YL L ++RDL N LV + + DF +S
Sbjct: 130 GPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMS------- 182
Query: 246 XXXXXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCS 305
YST R R T+ P R E + R +
Sbjct: 183 -------------------RDIYSTDYYRVGGR--------TMLPIRWMPPESILYRKFT 215
Query: 306 FVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTLRNIVK-KPL 363
D W+FG+ ++E+ YG+ P+ SN + I + + L
Sbjct: 216 -------------------TESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGREL 256
Query: 364 TFPTQSPSSMSEYHARDLISGLLNKDPCNR 393
P P E +A ++ G ++P R
Sbjct: 257 ERPRACP---PEVYA--IMRGCWQREPQQR 281
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 70/171 (40%), Gaps = 21/171 (12%)
Query: 75 TGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXH 134
T R +++G G+ G+V +C + QD E + +
Sbjct: 5 TQFEERHLKFLQQLGKGNFGSVEMCRYDP--LQDNTGEVVAVKKLQHSTEEHLRDF---- 58
Query: 135 RAEMEKKILKMLDHPFLPTLYAEFEASNFSC------IVMEFCSGGDLHSLRHKQPHK-R 187
E E +ILK L H + +++ +S ++ME+ G L + Q HK R
Sbjct: 59 --EREIEILKSLQHDNI----VKYKGVCYSAGRRNLKLIMEYLPYGSLRD--YLQKHKER 110
Query: 188 FSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
Y +++ +EYL I+RDL N+LV ++ + + DF L+
Sbjct: 111 IDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 161
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 70/171 (40%), Gaps = 21/171 (12%)
Query: 75 TGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXH 134
T R +++G G+ G+V +C + QD E + +
Sbjct: 12 TQFEERHLKFLQQLGKGNFGSVEMCRYDP--LQDNTGEVVAVKKLQHSTEEHLRDF---- 65
Query: 135 RAEMEKKILKMLDHPFLPTLYAEFEASNFSC------IVMEFCSGGDLHSLRHKQPHK-R 187
E E +ILK L H + +++ +S ++ME+ G L + Q HK R
Sbjct: 66 --EREIEILKSLQHDNI----VKYKGVCYSAGRRNLKLIMEYLPYGSLRD--YLQKHKER 117
Query: 188 FSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
Y +++ +EYL I+RDL N+LV ++ + + DF L+
Sbjct: 118 IDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 168
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 70/171 (40%), Gaps = 21/171 (12%)
Query: 75 TGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXH 134
T R +++G G+ G+V +C + QD E + +
Sbjct: 11 TQFEERHLKFLQQLGKGNFGSVEMCRYDP--LQDNTGEVVAVKKLQHSTEEHLRDF---- 64
Query: 135 RAEMEKKILKMLDHPFLPTLYAEFEASNFSC------IVMEFCSGGDLHSLRHKQPHK-R 187
E E +ILK L H + +++ +S ++ME+ G L + Q HK R
Sbjct: 65 --EREIEILKSLQHDNI----VKYKGVCYSAGRRNLKLIMEYLPYGSLRD--YLQKHKER 116
Query: 188 FSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
Y +++ +EYL I+RDL N+LV ++ + + DF L+
Sbjct: 117 IDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 167
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 70/171 (40%), Gaps = 21/171 (12%)
Query: 75 TGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXH 134
T R +++G G+ G+V +C + QD E + +
Sbjct: 4 TQFEERHLKFLQQLGKGNFGSVEMCRYDP--LQDNTGEVVAVKKLQHSTEEHLRDF---- 57
Query: 135 RAEMEKKILKMLDHPFLPTLYAEFEASNFSC------IVMEFCSGGDLHSLRHKQPHK-R 187
E E +ILK L H + +++ +S ++ME+ G L + Q HK R
Sbjct: 58 --EREIEILKSLQHDNI----VKYKGVCYSAGRRNLKLIMEYLPYGSLRD--YLQKHKER 109
Query: 188 FSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
Y +++ +EYL I+RDL N+LV ++ + + DF L+
Sbjct: 110 IDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 160
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 70/171 (40%), Gaps = 21/171 (12%)
Query: 75 TGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXH 134
T R +++G G+ G+V +C + QD E + +
Sbjct: 5 TQFEERHLKFLQQLGKGNFGSVEMCRYDP--LQDNTGEVVAVKKLQHSTEEHLRDF---- 58
Query: 135 RAEMEKKILKMLDHPFLPTLYAEFEASNFSC------IVMEFCSGGDLHSLRHKQPHK-R 187
E E +ILK L H + +++ +S ++ME+ G L + Q HK R
Sbjct: 59 --EREIEILKSLQHDNI----VKYKGVCYSAGRRNLKLIMEYLPYGSLRD--YLQKHKER 110
Query: 188 FSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
Y +++ +EYL I+RDL N+LV ++ + + DF L+
Sbjct: 111 IDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 161
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 70/171 (40%), Gaps = 21/171 (12%)
Query: 75 TGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXH 134
T R +++G G+ G+V +C + QD E + +
Sbjct: 9 TQFEERHLKFLQQLGKGNFGSVEMCRYDP--LQDNTGEVVAVKKLQHSTEEHLRDF---- 62
Query: 135 RAEMEKKILKMLDHPFLPTLYAEFEASNFSC------IVMEFCSGGDLHSLRHKQPHK-R 187
E E +ILK L H + +++ +S ++ME+ G L + Q HK R
Sbjct: 63 --EREIEILKSLQHDNI----VKYKGVCYSAGRRNLKLIMEYLPYGSLRD--YLQKHKER 114
Query: 188 FSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
Y +++ +EYL I+RDL N+LV ++ + + DF L+
Sbjct: 115 IDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 165
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 70/171 (40%), Gaps = 21/171 (12%)
Query: 75 TGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXH 134
T R +++G G+ G+V +C + QD E + +
Sbjct: 10 TQFEERHLKFLQQLGKGNFGSVEMCRYDP--LQDNTGEVVAVKKLQHSTEEHLRDF---- 63
Query: 135 RAEMEKKILKMLDHPFLPTLYAEFEASNFSC------IVMEFCSGGDLHSLRHKQPHK-R 187
E E +ILK L H + +++ +S ++ME+ G L + Q HK R
Sbjct: 64 --EREIEILKSLQHDNI----VKYKGVCYSAGRRNLKLIMEYLPYGSLRD--YLQKHKER 115
Query: 188 FSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
Y +++ +EYL I+RDL N+LV ++ + + DF L+
Sbjct: 116 IDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 166
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 70/171 (40%), Gaps = 21/171 (12%)
Query: 75 TGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXH 134
T R +++G G+ G+V +C + QD E + +
Sbjct: 8 TQFEERHLKFLQQLGKGNFGSVEMCRYDP--LQDNTGEVVAVKKLQHSTEEHLRDF---- 61
Query: 135 RAEMEKKILKMLDHPFLPTLYAEFEASNFSC------IVMEFCSGGDLHSLRHKQPHK-R 187
E E +ILK L H + +++ +S ++ME+ G L + Q HK R
Sbjct: 62 --EREIEILKSLQHDNI----VKYKGVCYSAGRRNLKLIMEYLPYGSLRD--YLQKHKER 113
Query: 188 FSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
Y +++ +EYL I+RDL N+LV ++ + + DF L+
Sbjct: 114 IDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 164
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 69/166 (41%), Gaps = 21/166 (12%)
Query: 80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEME 139
R +++G G+ G+V +C + QD E + + E E
Sbjct: 28 RHLKFLQQLGKGNFGSVEMCRYDP--LQDNTGEVVAVKKLQHSTEEHLRDF------ERE 79
Query: 140 KKILKMLDHPFLPTLYAEFEASNFSC------IVMEFCSGGDLHSLRHKQPHK-RFSLTS 192
+ILK L H + +++ +S ++ME+ G L + Q HK R
Sbjct: 80 IEILKSLQHDNI----VKYKGVCYSAGRRNLKLIMEYLPYGSLRD--YLQKHKERIDHIK 133
Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
Y +++ +EYL I+RDL N+LV ++ + + DF L+
Sbjct: 134 LLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 179
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 69/166 (41%), Gaps = 21/166 (12%)
Query: 80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEME 139
R +++G G+ G+V +C + QD E + + E E
Sbjct: 28 RHLKFLQQLGKGNFGSVEMCRYDP--LQDNTGEVVAVKKLQHSTEEHLRDF------ERE 79
Query: 140 KKILKMLDHPFLPTLYAEFEASNFSC------IVMEFCSGGDLHSLRHKQPHK-RFSLTS 192
+ILK L H + +++ +S ++ME+ G L + Q HK R
Sbjct: 80 IEILKSLQHDNI----VKYKGVCYSAGRRNLKLIMEYLPYGSLRD--YLQKHKERIDHIK 133
Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
Y +++ +EYL I+RDL N+LV ++ + + DF L+
Sbjct: 134 LLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 179
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 68/190 (35%), Gaps = 66/190 (34%)
Query: 166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHML---------GIIYRD 216
+VME+ G L ++ H ++S R A V L YLH I +RD
Sbjct: 89 LVMEYYPNGSLX--KYLSLHTSDWVSSCRL-AHSVTRGLAYLHTELPRGDHYKPAISHRD 145
Query: 217 LKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYTRQYSTRLSRFL 276
L NVLV++DG ++SDF LS+
Sbjct: 146 LNSRNVLVKNDGTCVISDFGLSM------------------------------------- 168
Query: 277 NRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGG-------SHGNAVDW 329
LT NRL + S VGT Y++PEV G S VD
Sbjct: 169 ----------RLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDM 218
Query: 330 WAFGIFIYEM 339
+A G+ +E+
Sbjct: 219 YALGLIYWEI 228
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 45/100 (45%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E ++K + HP L L I+ EF + G+L + + + + A
Sbjct: 305 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 364
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
++ A+EYL I+R+L N LV + + ++DF LS
Sbjct: 365 QISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLS 404
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 58/157 (36%), Gaps = 15/157 (9%)
Query: 82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
L R+GAG G V++ N GH + ++ E
Sbjct: 23 LKLVERLGAGQFGEVWMGYYN-------GHTKVAVKSLKQGSMSPDAFLA-------EAN 68
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
++K L H L LYA I+ E+ G L + ++ AA++
Sbjct: 69 LMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIA 127
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ ++ I+RDL+ N+LV ++DF L+
Sbjct: 128 EGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLA 164
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 311 EYVSPEVASGGSHGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTLRNI 358
++ +PE + G+ D W+FGI + E++ +GR P+ +N ++N+
Sbjct: 183 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 231
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 45/100 (45%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E ++K + HP L L I+ EF + G+L + + + + A
Sbjct: 263 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 322
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
++ A+EYL I+R+L N LV + + ++DF LS
Sbjct: 323 QISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLS 362
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Query: 166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVR 225
+VME+ G SLR P L +A ++ + YLH I+R+L NVL+
Sbjct: 95 LVMEYVPLG---SLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRNLAARNVLLD 151
Query: 226 SDGHIMLSDFDLS 238
+D + + DF L+
Sbjct: 152 NDRLVKIGDFGLA 164
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 28/46 (60%)
Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+F ++L L+Y+H II+RDLKP N+ V D + + DF L+
Sbjct: 123 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 168
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 306 FVGTHEYVSPEVASGGSHGN-AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT 364
+V T Y +PE+ H N VD W+ G + E++ GRT F + L+ I++ T
Sbjct: 178 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 237
Query: 365 FPTQSPSSMSEYHARDLISGL 385
+ +S AR+ I L
Sbjct: 238 PGAELLKKISSESARNYIQSL 258
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 42/96 (43%), Gaps = 6/96 (6%)
Query: 144 KMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARF--YAAEVL 201
K+ HP L +E + E C SL+ SL A+ Y + L
Sbjct: 112 KVGQHPCCVRLEQAWEEGGILYLQTELCG----PSLQQHCEAWGASLPEAQVWGYLRDTL 167
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDL 237
+AL +LH G+++ D+KP N+ + G L DF L
Sbjct: 168 LALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGL 203
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 58/157 (36%), Gaps = 15/157 (9%)
Query: 82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
L R+GAG G V++ N GH + ++ E
Sbjct: 21 LKLVERLGAGQFGEVWMGYYN-------GHTKVAVKSLKQGSMSPDAFLA-------EAN 66
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
++K L H L LYA I+ E+ G L + ++ AA++
Sbjct: 67 LMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIA 125
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ ++ I+RDL+ N+LV ++DF L+
Sbjct: 126 EGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLA 162
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 311 EYVSPEVASGGSHGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTLRNI 358
++ +PE + G+ D W+FGI + E++ +GR P+ +N ++N+
Sbjct: 181 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 229
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 58/157 (36%), Gaps = 15/157 (9%)
Query: 82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
L R+GAG G V++ N GH + ++ E
Sbjct: 25 LKLVERLGAGQFGEVWMGYYN-------GHTKVAVKSLKQGSMSPDAFLA-------EAN 70
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
++K L H L LYA I+ E+ G L + ++ AA++
Sbjct: 71 LMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIA 129
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ ++ I+RDL+ N+LV ++DF L+
Sbjct: 130 EGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLA 166
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 311 EYVSPEVASGGSHGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTLRNI 358
++ +PE + G+ D W+FGI + E++ +GR P+ +N ++N+
Sbjct: 185 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 233
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 58/157 (36%), Gaps = 15/157 (9%)
Query: 82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
L R+GAG G V++ N GH + ++ E
Sbjct: 24 LKLVERLGAGQFGEVWMGYYN-------GHTKVAVKSLKQGSMSPDAFLA-------EAN 69
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
++K L H L LYA I+ E+ G L + ++ AA++
Sbjct: 70 LMKQLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIA 128
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ ++ I+RDL+ N+LV ++DF L+
Sbjct: 129 EGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLA 165
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 311 EYVSPEVASGGSHGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTLRNI 358
++ +PE + G+ D W+FGI + E++ +GR P+ +N ++N+
Sbjct: 184 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 232
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 58/157 (36%), Gaps = 15/157 (9%)
Query: 82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
L R+GAG G V++ N GH + ++ E
Sbjct: 21 LKLVERLGAGQFGEVWMGYYN-------GHTKVAVKSLKQGSMSPDAFLA-------EAN 66
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
++K L H L LYA I+ E+ G L + ++ AA++
Sbjct: 67 LMKQLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIA 125
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ ++ I+RDL+ N+LV ++DF L+
Sbjct: 126 EGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLA 162
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 311 EYVSPEVASGGSHGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTLRNI 358
++ +PE + G+ D W+FGI + E++ +GR P+ +N ++N+
Sbjct: 181 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 229
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 58/157 (36%), Gaps = 15/157 (9%)
Query: 82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
L R+GAG G V++ N GH + ++ E
Sbjct: 20 LKLVERLGAGQFGEVWMGYYN-------GHTKVAVKSLKQGSMSPDAFLA-------EAN 65
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
++K L H L LYA I+ E+ G L + ++ AA++
Sbjct: 66 LMKQLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIA 124
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ ++ I+RDL+ N+LV ++DF L+
Sbjct: 125 EGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLA 161
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 311 EYVSPEVASGGSHGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTLRNI 358
++ +PE + G+ D W+FGI + E++ +GR P+ +N ++N+
Sbjct: 180 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 228
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 75/210 (35%), Gaps = 64/210 (30%)
Query: 164 SCIVMEFCSGGDLHS-LRHKQPHKRF-------SLTSARFYAAEVLVALEYLHMLGIIYR 215
+ ++ME + GDL S LR +P SL+ A E+ + YL+ ++R
Sbjct: 94 TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHR 153
Query: 216 DLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYTRQ-YSTRLSR 274
DL N +V D + + DF + TR Y T R
Sbjct: 154 DLAARNCMVAEDFTVKIGDFGM---------------------------TRDIYETDYYR 186
Query: 275 FLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGI 334
K + L P R ++SPE G D W+FG+
Sbjct: 187 --------KGGKGLLPVR-------------------WMSPESLKDGVFTTYSDVWSFGV 219
Query: 335 FIYEM-IYGRTPFAAPSNETTLRNIVKKPL 363
++E+ P+ SNE LR +++ L
Sbjct: 220 VLWEIATLAEQPYQGLSNEQVLRFVMEGGL 249
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 24/31 (77%)
Query: 194 RFYAAEVLVALEYLHMLGIIYRDLKPENVLV 224
R+Y E+L AL+Y H GI++RD+KP NV++
Sbjct: 130 RYYIYELLKALDYCHSQGIMHRDVKPHNVMI 160
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 58/157 (36%), Gaps = 15/157 (9%)
Query: 82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
L R+GAG G V++ N GH + ++ E
Sbjct: 15 LKLVERLGAGQFGEVWMGYYN-------GHTKVAVKSLKQGSMSPDAFLA-------EAN 60
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
++K L H L LYA I+ E+ G L + ++ AA++
Sbjct: 61 LMKQLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIA 119
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ ++ I+RDL+ N+LV ++DF L+
Sbjct: 120 EGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLA 156
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 311 EYVSPEVASGGSHGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTLRNI 358
++ +PE + G+ D W+FGI + E++ +GR P+ +N ++N+
Sbjct: 175 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 223
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Query: 166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVR 225
+VME+ G SLR P L +A ++ + YLH I+R+L NVL+
Sbjct: 95 LVMEYVPLG---SLRDYLPRHSIGLAQLLLFAQQICEGMAYLHSQHYIHRNLAARNVLLD 151
Query: 226 SDGHIMLSDFDLS 238
+D + + DF L+
Sbjct: 152 NDRLVKIGDFGLA 164
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 24/31 (77%)
Query: 194 RFYAAEVLVALEYLHMLGIIYRDLKPENVLV 224
R+Y E+L AL+Y H GI++RD+KP NV++
Sbjct: 149 RYYIYELLKALDYCHSQGIMHRDVKPHNVMI 179
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 24/31 (77%)
Query: 194 RFYAAEVLVALEYLHMLGIIYRDLKPENVLV 224
R+Y E+L AL+Y H GI++RD+KP NV++
Sbjct: 129 RYYIYELLKALDYCHSQGIMHRDVKPHNVMI 159
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 73/161 (45%), Gaps = 20/161 (12%)
Query: 82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
+ L R+IG+G G +YL + N ++ + C+ + +E K
Sbjct: 11 YRLGRKIGSGSFGDIYLGA-NIASGEEVAIKLECV-------------KTKHPQLHIESK 56
Query: 142 ILKMLDHPF-LPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
KM+ +P++ +++ +VME G L L ++FSL + A ++
Sbjct: 57 FYKMMQGGVGIPSIKWCGAEGDYNVMVMELL-GPSLEDL-FNFCSRKFSLKTVLLLADQM 114
Query: 201 LVALEYLHMLGIIYRDLKPENVLV---RSDGHIMLSDFDLS 238
+ +EY+H I+RD+KP+N L+ + + + DF L+
Sbjct: 115 ISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLA 155
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 75/210 (35%), Gaps = 64/210 (30%)
Query: 164 SCIVMEFCSGGDLHS-LRHKQPHKRF-------SLTSARFYAAEVLVALEYLHMLGIIYR 215
+ ++ME + GDL S LR +P SL+ A E+ + YL+ ++R
Sbjct: 97 TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHR 156
Query: 216 DLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYTRQ-YSTRLSR 274
DL N +V D + + DF + TR Y T R
Sbjct: 157 DLAARNCMVAEDFTVKIGDFGM---------------------------TRDIYETDYYR 189
Query: 275 FLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGI 334
K + L P R ++SPE G D W+FG+
Sbjct: 190 --------KGGKGLLPVR-------------------WMSPESLKDGVFTTYSDVWSFGV 222
Query: 335 FIYEM-IYGRTPFAAPSNETTLRNIVKKPL 363
++E+ P+ SNE LR +++ L
Sbjct: 223 VLWEIATLAEQPYQGLSNEQVLRFVMEGGL 252
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 24/31 (77%)
Query: 194 RFYAAEVLVALEYLHMLGIIYRDLKPENVLV 224
R+Y E+L AL+Y H GI++RD+KP NV++
Sbjct: 128 RYYIYELLKALDYCHSQGIMHRDVKPHNVMI 158
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 24/31 (77%)
Query: 194 RFYAAEVLVALEYLHMLGIIYRDLKPENVLV 224
R+Y E+L AL+Y H GI++RD+KP NV++
Sbjct: 128 RYYIYELLKALDYCHSQGIMHRDVKPHNVMI 158
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 24/31 (77%)
Query: 194 RFYAAEVLVALEYLHMLGIIYRDLKPENVLV 224
R+Y E+L AL+Y H GI++RD+KP NV++
Sbjct: 129 RYYIYELLKALDYCHSQGIMHRDVKPHNVMI 159
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 58/157 (36%), Gaps = 15/157 (9%)
Query: 82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
L R+GAG G V++ N GH + ++ E
Sbjct: 17 LKLVERLGAGQFGEVWMGYYN-------GHTKVAVKSLKQGSMSPDAFLA-------EAN 62
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
++K L H L LYA I+ E+ G L + ++ AA++
Sbjct: 63 LMKQLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIA 121
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ ++ I+RDL+ N+LV ++DF L+
Sbjct: 122 EGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLA 158
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 311 EYVSPEVASGGSHGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTLRNI 358
++ +PE + G+ D W+FGI + E++ +GR P+ +N ++N+
Sbjct: 177 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 225
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 75/210 (35%), Gaps = 64/210 (30%)
Query: 164 SCIVMEFCSGGDLHS-LRHKQPHKRF-------SLTSARFYAAEVLVALEYLHMLGIIYR 215
+ ++ME + GDL S LR +P SL+ A E+ + YL+ ++R
Sbjct: 90 TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHR 149
Query: 216 DLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYTRQ-YSTRLSR 274
DL N +V D + + DF + TR Y T R
Sbjct: 150 DLAARNCMVAEDFTVKIGDFGM---------------------------TRDIYETDYYR 182
Query: 275 FLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGI 334
K + L P R ++SPE G D W+FG+
Sbjct: 183 --------KGGKGLLPVR-------------------WMSPESLKDGVFTTYSDVWSFGV 215
Query: 335 FIYEM-IYGRTPFAAPSNETTLRNIVKKPL 363
++E+ P+ SNE LR +++ L
Sbjct: 216 VLWEIATLAEQPYQGLSNEQVLRFVMEGGL 245
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFC-SGGDLHSLRHKQPHKRFSLTSARFYAAEV 200
+LK D P++ + F + I ME + + R + P L +
Sbjct: 77 VLKSHDCPYIVQCFGTFITNTDVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKA 136
Query: 201 LVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
L L+ H G+I+RD+KP N+L+ G I L DF +S
Sbjct: 137 LYYLKEKH--GVIHRDVKPSNILLDERGQIKLCDFGIS 172
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 59/169 (34%), Gaps = 17/169 (10%)
Query: 71 FGRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXX 130
G L ++ L + IG G+ G V L YR ++ C
Sbjct: 3 LGSGWALNMKELKLLQTIGKGEFGDVML----GDYRGNKVAVKCI------------KND 46
Query: 131 XXXHRAEMEKKILKMLDHPFLPTLYAEF-EASNFSCIVMEFCSGGDLHSLRHKQPHKRFS 189
E ++ L H L L E IV E+ + G L +
Sbjct: 47 ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLG 106
Query: 190 LTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
++ +V A+EYL ++RDL NVLV D +SDF L+
Sbjct: 107 GDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLT 155
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 75/210 (35%), Gaps = 64/210 (30%)
Query: 164 SCIVMEFCSGGDLHS-LRHKQPHKRF-------SLTSARFYAAEVLVALEYLHMLGIIYR 215
+ ++ME + GDL S LR +P SL+ A E+ + YL+ ++R
Sbjct: 103 TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHR 162
Query: 216 DLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYTRQ-YSTRLSR 274
DL N +V D + + DF + TR Y T R
Sbjct: 163 DLAARNCMVAEDFTVKIGDFGM---------------------------TRDIYETDYYR 195
Query: 275 FLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGI 334
K + L P R ++SPE G D W+FG+
Sbjct: 196 --------KGGKGLLPVR-------------------WMSPESLKDGVFTTYSDVWSFGV 228
Query: 335 FIYEM-IYGRTPFAAPSNETTLRNIVKKPL 363
++E+ P+ SNE LR +++ L
Sbjct: 229 VLWEIATLAEQPYQGLSNEQVLRFVMEGGL 258
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 24/31 (77%)
Query: 194 RFYAAEVLVALEYLHMLGIIYRDLKPENVLV 224
R+Y E+L AL+Y H GI++RD+KP NV++
Sbjct: 128 RYYIYELLKALDYCHSQGIMHRDVKPHNVMI 158
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 62/316 (19%), Positives = 119/316 (37%), Gaps = 95/316 (30%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTS------ 192
E KI++ LDH + ++ E + S + + S +L+S+ Q + L +
Sbjct: 58 EIKIIRRLDHDNIVKVF-EILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGP 116
Query: 193 -----ARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIM-LSDFDLSLCSNAIXX 246
AR + ++L L+Y+H +++RDLKP N+ + ++ ++ + DF L+
Sbjct: 117 LLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLA-------- 168
Query: 247 XXXXXXXXXXXXXRSQTYTRQYSTRLSR-FLNRFFGSKKIQTLTPNRLFVAEPVAARSCS 305
R + LS + +++ S ++ L+PN
Sbjct: 169 -------------RIMDPHYSHKGHLSEGLVTKWYRSPRL-LLSPN-------------- 200
Query: 306 FVGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKK-PL- 363
++ A+D WA G EM+ G+T FA ++ I++ P+
Sbjct: 201 ----------------NYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVV 244
Query: 364 ----------TFPTQSPSSMSEYH-------------ARDLISGLLNKDPCNRLGSKRGA 400
P + M+E H A D + +L P +RL A
Sbjct: 245 HEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRL----TA 300
Query: 401 ADVKTHPFFKGLNFAL 416
+ +HP+ +F +
Sbjct: 301 EEALSHPYMSIYSFPM 316
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 24/31 (77%)
Query: 194 RFYAAEVLVALEYLHMLGIIYRDLKPENVLV 224
R+Y E+L AL+Y H GI++RD+KP NV++
Sbjct: 128 RYYIYELLKALDYCHSQGIMHRDVKPHNVMI 158
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 58/157 (36%), Gaps = 15/157 (9%)
Query: 82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
L R+GAG G V++ N GH + ++ E
Sbjct: 16 LKLVERLGAGQFGEVWMGYYN-------GHTKVAVKSLKQGSMSPDAFLA-------EAN 61
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
++K L H L LYA I+ E+ G L + ++ AA++
Sbjct: 62 LMKQLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIA 120
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ ++ I+RDL+ N+LV ++DF L+
Sbjct: 121 EGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLA 157
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 311 EYVSPEVASGGSHGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTLRNI 358
++ +PE + G+ D W+FGI + E++ +GR P+ +N ++N+
Sbjct: 176 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 224
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 75/210 (35%), Gaps = 64/210 (30%)
Query: 164 SCIVMEFCSGGDLHS-LRHKQPHKRF-------SLTSARFYAAEVLVALEYLHMLGIIYR 215
+ ++ME + GDL S LR +P SL+ A E+ + YL+ ++R
Sbjct: 96 TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHR 155
Query: 216 DLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYTRQ-YSTRLSR 274
DL N +V D + + DF + TR Y T R
Sbjct: 156 DLAARNCMVAEDFTVKIGDFGM---------------------------TRDIYETDYYR 188
Query: 275 FLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGI 334
K + L P R ++SPE G D W+FG+
Sbjct: 189 --------KGGKGLLPVR-------------------WMSPESLKDGVFTTYSDVWSFGV 221
Query: 335 FIYEM-IYGRTPFAAPSNETTLRNIVKKPL 363
++E+ P+ SNE LR +++ L
Sbjct: 222 VLWEIATLAEQPYQGLSNEQVLRFVMEGGL 251
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 24/31 (77%)
Query: 194 RFYAAEVLVALEYLHMLGIIYRDLKPENVLV 224
R+Y E+L AL+Y H GI++RD+KP NV++
Sbjct: 128 RYYIYELLKALDYCHSQGIMHRDVKPHNVMI 158
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 75/210 (35%), Gaps = 64/210 (30%)
Query: 164 SCIVMEFCSGGDLHS-LRHKQPHKRF-------SLTSARFYAAEVLVALEYLHMLGIIYR 215
+ ++ME + GDL S LR +P SL+ A E+ + YL+ ++R
Sbjct: 96 TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHR 155
Query: 216 DLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYTRQ-YSTRLSR 274
DL N +V D + + DF + TR Y T R
Sbjct: 156 DLAARNCMVAEDFTVKIGDFGM---------------------------TRDIYETDYYR 188
Query: 275 FLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGI 334
K + L P R ++SPE G D W+FG+
Sbjct: 189 --------KGGKGLLPVR-------------------WMSPESLKDGVFTTYSDVWSFGV 221
Query: 335 FIYEM-IYGRTPFAAPSNETTLRNIVKKPL 363
++E+ P+ SNE LR +++ L
Sbjct: 222 VLWEIATLAEQPYQGLSNEQVLRFVMEGGL 251
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 58/155 (37%), Gaps = 15/155 (9%)
Query: 84 LHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKKIL 143
L R+GAG G V++ N GH + ++ E ++
Sbjct: 17 LVERLGAGQFGEVWMGYYN-------GHTKVAVKSLKQGSMSPDAFLA-------EANLM 62
Query: 144 KMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVA 203
K L H L LYA I+ E+ G L + ++ AA++
Sbjct: 63 KQLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 121
Query: 204 LEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ ++ I+RDL+ N+LV ++DF L+
Sbjct: 122 MAFIEERNYIHRDLRAANILVSDTLSCKIADFGLA 156
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 311 EYVSPEVASGGSHGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTLRNI 358
++ +PE + G+ D W+FGI + E++ +GR P+ +N ++N+
Sbjct: 175 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 223
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 86/226 (38%), Gaps = 60/226 (26%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
G DL+ L Q S ++ ++L L+Y+H +++RDLKP N+L+ + + +
Sbjct: 129 GADLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKI 185
Query: 233 SDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNR 292
DF L+ ++ +T
Sbjct: 186 CDFGLARVADP-----------------DHDHTG-------------------------- 202
Query: 293 LFVAEPVAARSCSFVGTHEYVSPEVA-SGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSN 351
F+ E VA R Y +PE+ + + ++D W+ G + EM+ R F
Sbjct: 203 -FLTEYVATRW--------YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 253
Query: 352 ETTLRNIVKKPLTFPTQSP-SSMSEYHARDLISGL--LNKDPCNRL 394
L +I+ L P+Q + + AR+ + L NK P NRL
Sbjct: 254 LDQLNHILGI-LGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRL 298
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 24/31 (77%)
Query: 194 RFYAAEVLVALEYLHMLGIIYRDLKPENVLV 224
R+Y E+L AL+Y H GI++RD+KP NV++
Sbjct: 128 RYYIYELLKALDYCHSQGIMHRDVKPHNVMI 158
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 75/210 (35%), Gaps = 64/210 (30%)
Query: 164 SCIVMEFCSGGDLHS-LRHKQPHKRF-------SLTSARFYAAEVLVALEYLHMLGIIYR 215
+ ++ME + GDL S LR +P SL+ A E+ + YL+ ++R
Sbjct: 125 TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHR 184
Query: 216 DLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYTRQ-YSTRLSR 274
DL N +V D + + DF + TR Y T R
Sbjct: 185 DLAARNCMVAEDFTVKIGDFGM---------------------------TRDIYETDYYR 217
Query: 275 FLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGI 334
K + L P R ++SPE G D W+FG+
Sbjct: 218 --------KGGKGLLPVR-------------------WMSPESLKDGVFTTYSDVWSFGV 250
Query: 335 FIYEM-IYGRTPFAAPSNETTLRNIVKKPL 363
++E+ P+ SNE LR +++ L
Sbjct: 251 VLWEIATLAEQPYQGLSNEQVLRFVMEGGL 280
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 58/155 (37%), Gaps = 15/155 (9%)
Query: 84 LHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKKIL 143
L R+GAG G V++ N GH + ++ E ++
Sbjct: 17 LVERLGAGQFGEVWMGYYN-------GHTKVAVKSLKQGSMSPDAFLA-------EANLM 62
Query: 144 KMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVA 203
K L H L LYA I+ E+ G L + ++ AA++
Sbjct: 63 KQLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 121
Query: 204 LEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ ++ I+RDL+ N+LV ++DF L+
Sbjct: 122 MAFIEERNYIHRDLRAANILVSDTLSCKIADFGLA 156
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 311 EYVSPEVASGGSHGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTLRNI 358
++ +PE + G+ D W+FGI + E++ +GR P+ +N ++N+
Sbjct: 175 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 223
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 54/121 (44%), Gaps = 20/121 (16%)
Query: 136 AEMEKKIL-KMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSAR 194
A ME K+L + DHP + Y F I +E C+ +L L + +L +
Sbjct: 73 ALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNL-NLQDLVESKNVSDENLKLQK 131
Query: 195 FY-----AAEVLVALEYLHMLGIIYRDLKPENVLVRSDG-------------HIMLSDFD 236
Y ++ + +LH L II+RDLKP+N+LV + I++SDF
Sbjct: 132 EYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG 191
Query: 237 L 237
L
Sbjct: 192 L 192
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 54/121 (44%), Gaps = 20/121 (16%)
Query: 136 AEMEKKIL-KMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSAR 194
A ME K+L + DHP + Y F I +E C+ +L L + +L +
Sbjct: 73 ALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNL-NLQDLVESKNVSDENLKLQK 131
Query: 195 FY-----AAEVLVALEYLHMLGIIYRDLKPENVLVRSDG-------------HIMLSDFD 236
Y ++ + +LH L II+RDLKP+N+LV + I++SDF
Sbjct: 132 EYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG 191
Query: 237 L 237
L
Sbjct: 192 L 192
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 58/155 (37%), Gaps = 15/155 (9%)
Query: 84 LHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKKIL 143
L R+GAG G V++ N GH + ++ E ++
Sbjct: 12 LVERLGAGQFGEVWMGYYN-------GHTKVAVKSLKQGSMSPDAFLA-------EANLM 57
Query: 144 KMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVA 203
K L H L LYA I+ E+ G L + ++ AA++
Sbjct: 58 KQLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 116
Query: 204 LEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ ++ I+RDL+ N+LV ++DF L+
Sbjct: 117 MAFIEERNYIHRDLRAANILVSDTLSCKIADFGLA 151
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 311 EYVSPEVASGGSHGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTLRNI 358
++ +PE + G+ D W+FGI + E++ +GR P+ +N ++N+
Sbjct: 170 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 218
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 70/171 (40%), Gaps = 21/171 (12%)
Query: 75 TGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXH 134
T R +++G G+ G+V +C + QD E + +
Sbjct: 8 TQFEERHLKFLQQLGKGNFGSVEMCRYDP--LQDNTGEVVAVKKLQHSTEEHLRDF---- 61
Query: 135 RAEMEKKILKMLDHPFLPTLYAEFEASNFSC------IVMEFCSGGDLHSLRHKQPH-KR 187
E E +ILK L H + +++ +S ++ME+ G L + Q H +R
Sbjct: 62 --EREIEILKSLQHDNI----VKYKGVCYSAGRRNLKLIMEYLPYGSLRD--YLQAHAER 113
Query: 188 FSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
Y +++ +EYL I+RDL N+LV ++ + + DF L+
Sbjct: 114 IDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 164
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
G DL+++ Q + + +F ++L L+Y+H II+RDLKP N+ V D + +
Sbjct: 110 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 233 SDFDLS 238
F L+
Sbjct: 167 LGFGLA 172
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 306 FVGTHEYVSPEVASGGSHGN-AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT 364
+V T Y +PE+ H N VD W+ G + E++ GRT F + L+ I++ T
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 365 FPTQSPSSMSEYHARDLISGL 385
+ +S AR+ I L
Sbjct: 242 PGAELLKKISSESARNYIQSL 262
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 54/121 (44%), Gaps = 20/121 (16%)
Query: 136 AEMEKKIL-KMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSAR 194
A ME K+L + DHP + Y F I +E C+ +L L + +L +
Sbjct: 55 ALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNL-NLQDLVESKNVSDENLKLQK 113
Query: 195 FY-----AAEVLVALEYLHMLGIIYRDLKPENVLVRSDG-------------HIMLSDFD 236
Y ++ + +LH L II+RDLKP+N+LV + I++SDF
Sbjct: 114 EYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG 173
Query: 237 L 237
L
Sbjct: 174 L 174
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 70/171 (40%), Gaps = 21/171 (12%)
Query: 75 TGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXH 134
T R +++G G+ G+V +C + QD E + +
Sbjct: 6 TQFEERHLKFLQQLGKGNFGSVEMCRYDP--LQDNTGEVVAVKKLQHSTEEHLRDF---- 59
Query: 135 RAEMEKKILKMLDHPFLPTLYAEFEASNFSC------IVMEFCSGGDLHSLRHKQPHK-R 187
E E +ILK L H + +++ +S ++ME+ G L + Q HK R
Sbjct: 60 --EREIEILKSLQHDNI----VKYKGVCYSAGRRNLKLIMEYLPYGSLRD--YLQKHKER 111
Query: 188 FSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
Y +++ +EYL I+R+L N+LV ++ + + DF L+
Sbjct: 112 IDHIKLLQYTSQICKGMEYLGTKRYIHRNLATRNILVENENRVKIGDFGLT 162
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 74/206 (35%), Gaps = 64/206 (31%)
Query: 164 SCIVMEFCSGGDLHS-LRHKQPHKRF-------SLTSARFYAAEVLVALEYLHMLGIIYR 215
+ +VME + GDL S LR +P +L AAE+ + YL+ ++R
Sbjct: 94 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHR 153
Query: 216 DLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYTRQ-YSTRLSR 274
DL N +V D + + DF + TR Y T R
Sbjct: 154 DLAARNCMVAHDFTVKIGDFGM---------------------------TRDIYETDYYR 186
Query: 275 FLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGI 334
K + L P R +++PE G + D W+FG+
Sbjct: 187 --------KGGKGLLPVR-------------------WMAPESLKDGVFTTSSDMWSFGV 219
Query: 335 FIYEMI-YGRTPFAAPSNETTLRNIV 359
++E+ P+ SNE L+ ++
Sbjct: 220 VLWEITSLAEQPYQGLSNEQVLKFVM 245
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
G DL+++ Q + + +F ++L L+Y+H II+RDLKP N+ V D + +
Sbjct: 110 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 233 SDFDLS 238
D L+
Sbjct: 167 LDAGLA 172
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 306 FVGTHEYVSPEVASGGSHGN-AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT 364
+V T Y +PE+ H N VD W+ G + E++ GRT F + L+ I++ T
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 365 FPTQSPSSMSEYHARDLISGL 385
+ +S AR+ I L
Sbjct: 242 PGAELLKKISSESARNYIQSL 262
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 54/121 (44%), Gaps = 20/121 (16%)
Query: 136 AEMEKKIL-KMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSAR 194
A ME K+L + DHP + Y F I +E C+ +L L + +L +
Sbjct: 55 ALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNL-NLQDLVESKNVSDENLKLQK 113
Query: 195 FY-----AAEVLVALEYLHMLGIIYRDLKPENVLVRSDG-------------HIMLSDFD 236
Y ++ + +LH L II+RDLKP+N+LV + I++SDF
Sbjct: 114 EYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG 173
Query: 237 L 237
L
Sbjct: 174 L 174
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 66/170 (38%), Gaps = 19/170 (11%)
Query: 80 RDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEME 139
+ F L R +G G+ G+V L +Q+ G M R E
Sbjct: 23 QQFTLGRMLGKGEFGSVREAQL----KQEDGSFVKVAVKMLKADIIASSDIEEFLR---E 75
Query: 140 KKILKMLDHPFLPTLYAEFEASN------FSCIVMEFCSGGDLHS--LRHKQPHKRFSL- 190
+K DHP + L S +++ F GDLH+ L + F+L
Sbjct: 76 AACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLP 135
Query: 191 --TSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
T RF ++ +EYL I+RDL N ++ D + ++DF LS
Sbjct: 136 LQTLVRFMV-DIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLS 184
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 64/170 (37%), Gaps = 58/170 (34%)
Query: 194 RFYAAEVLVALEYLHM--LGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXX 251
+ + +++ ++ LH+ + + +RD+KP NVLV +D L LC
Sbjct: 132 KVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNE------ADGTLKLCD---------- 175
Query: 252 XXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE 311
FGS K L+P +EP A CS
Sbjct: 176 ----------------------------FGSAK--KLSP-----SEPNVAYICS----RY 196
Query: 312 YVSPEVASGGSH-GNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVK 360
Y +PE+ G H AVD W+ G EM+ G F ++ L IV+
Sbjct: 197 YRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVR 246
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 74/206 (35%), Gaps = 64/206 (31%)
Query: 164 SCIVMEFCSGGDLHS-LRHKQPHKRF-------SLTSARFYAAEVLVALEYLHMLGIIYR 215
+ +VME + GDL S LR +P +L AAE+ + YL+ ++R
Sbjct: 95 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHR 154
Query: 216 DLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYTRQ-YSTRLSR 274
DL N +V D + + DF + TR Y T R
Sbjct: 155 DLAARNCMVAHDFTVKIGDFGM---------------------------TRDIYETAYYR 187
Query: 275 FLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGI 334
K + L P R +++PE G + D W+FG+
Sbjct: 188 --------KGGKGLLPVR-------------------WMAPESLKDGVFTTSSDMWSFGV 220
Query: 335 FIYEMI-YGRTPFAAPSNETTLRNIV 359
++E+ P+ SNE L+ ++
Sbjct: 221 VLWEITSLAEQPYQGLSNEQVLKFVM 246
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 74/206 (35%), Gaps = 64/206 (31%)
Query: 164 SCIVMEFCSGGDLHS-LRHKQPHKRF-------SLTSARFYAAEVLVALEYLHMLGIIYR 215
+ +VME + GDL S LR +P +L AAE+ + YL+ ++R
Sbjct: 95 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHR 154
Query: 216 DLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYTRQ-YSTRLSR 274
DL N +V D + + DF + TR Y T R
Sbjct: 155 DLAARNCMVAHDFTVKIGDFGM---------------------------TRDIYETDYYR 187
Query: 275 FLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGI 334
K + L P R +++PE G + D W+FG+
Sbjct: 188 --------KGGKGLLPVR-------------------WMAPESLKDGVFTTSSDMWSFGV 220
Query: 335 FIYEMI-YGRTPFAAPSNETTLRNIV 359
++E+ P+ SNE L+ ++
Sbjct: 221 VLWEITSLAEQPYQGLSNEQVLKFVM 246
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
G DL+++ Q + + +F ++L L+Y+H II+RDLKP N+ V D + +
Sbjct: 110 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 233 SDFDLS 238
D L+
Sbjct: 167 LDGGLA 172
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 306 FVGTHEYVSPEVASGGSHGN-AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT 364
+V T Y +PE+ H N VD W+ G + E++ GRT F + L+ I++ T
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 365 FPTQSPSSMSEYHARDLISGL 385
+ +S AR+ I L
Sbjct: 242 PGAELLKKISSESARNYIQSL 262
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 75/210 (35%), Gaps = 64/210 (30%)
Query: 164 SCIVMEFCSGGDLHS-LRHKQPHKRF-------SLTSARFYAAEVLVALEYLHMLGIIYR 215
+ ++ME + GDL S LR +P SL+ A E+ + YL+ ++R
Sbjct: 103 TLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHR 162
Query: 216 DLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYTRQ-YSTRLSR 274
DL N +V D + + DF + TR Y T R
Sbjct: 163 DLAARNCMVAEDFTVKIGDFGM---------------------------TRDIYETDYYR 195
Query: 275 FLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGI 334
K + L P R ++SPE G D W+FG+
Sbjct: 196 --------KGGKGLLPVR-------------------WMSPESLKDGVFTTYSDVWSFGV 228
Query: 335 FIYEM-IYGRTPFAAPSNETTLRNIVKKPL 363
++E+ P+ SNE LR +++ L
Sbjct: 229 VLWEIATLAEQPYQGLSNEQVLRFVMEGGL 258
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 173 GGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIML 232
G DL+++ Q + + +F ++L L+Y+H II+RDLKP N+ V D + +
Sbjct: 110 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 233 SDFDLS 238
D L+
Sbjct: 167 LDRGLA 172
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 306 FVGTHEYVSPEVASGGSHGN-AVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLT 364
+V T Y +PE+ H N VD W+ G + E++ GRT F + L+ I++ T
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 365 FPTQSPSSMSEYHARDLISGL 385
+ +S AR+ I L
Sbjct: 242 PGAELLKKISSESARNYIQSL 262
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 58/164 (35%), Gaps = 17/164 (10%)
Query: 76 GLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHR 135
L ++ L + IG G+ G V L YR ++ C
Sbjct: 189 ALNMKELKLLQTIGKGEFGDVML----GDYRGNKVAVKCI------------KNDATAQA 232
Query: 136 AEMEKKILKMLDHPFLPTLYAEF-EASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSAR 194
E ++ L H L L E IV E+ + G L +
Sbjct: 233 FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLL 292
Query: 195 FYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
++ +V A+EYL ++RDL NVLV D +SDF L+
Sbjct: 293 KFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLT 336
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
Query: 166 IVMEFCSGGDLHSL----RHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPEN 221
+++ F GDLH+ R + K L + + ++ + +EYL ++RDL N
Sbjct: 118 VILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARN 177
Query: 222 VLVRSDGHIMLSDFDLS 238
++R D + ++DF LS
Sbjct: 178 CMLRDDMTVCVADFGLS 194
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 31/48 (64%)
Query: 195 FYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSN 242
++ ++L L+Y+H +++RDLKP N+L+ + + + DF L+ ++
Sbjct: 148 YFLYQILRGLKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLARIAD 195
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 75/210 (35%), Gaps = 64/210 (30%)
Query: 164 SCIVMEFCSGGDLHS-LRHKQPHKRF-------SLTSARFYAAEVLVALEYLHMLGIIYR 215
+ ++ME + GDL S LR +P SL+ A E+ + YL+ ++R
Sbjct: 93 TLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHR 152
Query: 216 DLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYTRQ-YSTRLSR 274
DL N +V D + + DF + TR Y T R
Sbjct: 153 DLAARNCMVAEDFTVKIGDFGM---------------------------TRDIYETDYYR 185
Query: 275 FLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGI 334
K + L P R ++SPE G D W+FG+
Sbjct: 186 --------KGGKGLLPVR-------------------WMSPESLKDGVFTTYSDVWSFGV 218
Query: 335 FIYEM-IYGRTPFAAPSNETTLRNIVKKPL 363
++E+ P+ SNE LR +++ L
Sbjct: 219 VLWEIATLAEQPYQGLSNEQVLRFVMEGGL 248
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 74/210 (35%), Gaps = 64/210 (30%)
Query: 164 SCIVMEFCSGGDLHS-LRHKQPHKRF-------SLTSARFYAAEVLVALEYLHMLGIIYR 215
+ ++ME + GDL S LR +P SL+ A E+ + YL+ ++R
Sbjct: 90 TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHR 149
Query: 216 DLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYTRQ-YSTRLSR 274
DL N V D + + DF + TR Y T R
Sbjct: 150 DLAARNCXVAEDFTVKIGDFGM---------------------------TRDIYETDYYR 182
Query: 275 FLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGI 334
K + L P R ++SPE G D W+FG+
Sbjct: 183 --------KGGKGLLPVR-------------------WMSPESLKDGVFTTYSDVWSFGV 215
Query: 335 FIYEM-IYGRTPFAAPSNETTLRNIVKKPL 363
++E+ P+ SNE LR +++ L
Sbjct: 216 VLWEIATLAEQPYQGLSNEQVLRFVMEGGL 245
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 84/239 (35%), Gaps = 53/239 (22%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E I+ +HP + L S I+ EF G L S + +F++
Sbjct: 67 EASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSF-LRLNDGQFTVIQLVGMLR 125
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXX 258
+ + YL + ++RDL N+LV S+ +SDF L
Sbjct: 126 GIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGL--------------------- 164
Query: 259 XRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVA 318
SRFL ++P S + +PE
Sbjct: 165 --------------SRFLEEN---------------SSDPTETSSLGGKIPIRWTAPEAI 195
Query: 319 SGGSHGNAVDWWAFGIFIYE-MIYGRTPFAAPSNETTLRNIVKK-PLTFPTQSPSSMSE 375
+ +A D W++GI ++E M +G P+ SN+ + I + L P P+S+ +
Sbjct: 196 AFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYRLPPPPDCPTSLHQ 254
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 5/104 (4%)
Query: 137 EMEKKILKMLDHPFLPTLYA--EFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSAR 194
+ E +IL+ L H + E + +VME+ G SLR P L
Sbjct: 58 QREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLG---SLRDYLPRHCVGLAQLL 114
Query: 195 FYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+A ++ + YLH I+R L NVL+ +D + + DF L+
Sbjct: 115 LFAQQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLA 158
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 5/104 (4%)
Query: 137 EMEKKILKMLDHPFLPTLYA--EFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSAR 194
+ E +IL+ L H + E + +VME+ G SLR P L
Sbjct: 59 QREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLG---SLRDYLPRHCVGLAQLL 115
Query: 195 FYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+A ++ + YLH I+R L NVL+ +D + + DF L+
Sbjct: 116 LFAQQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLA 159
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 58/163 (35%), Gaps = 17/163 (10%)
Query: 77 LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRA 136
L ++ L + IG G+ G V L YR ++ C
Sbjct: 18 LNMKELKLLQTIGKGEFGDVML----GDYRGNKVAVKCI------------KNDATAQAF 61
Query: 137 EMEKKILKMLDHPFLPTLYAEF-EASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARF 195
E ++ L H L L E IV E+ + G L +
Sbjct: 62 LAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLK 121
Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
++ +V A+EYL ++RDL NVLV D +SDF L+
Sbjct: 122 FSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLT 164
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 58/164 (35%), Gaps = 17/164 (10%)
Query: 76 GLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHR 135
L ++ L + IG G+ G V L YR ++ C
Sbjct: 2 ALNMKELKLLQTIGKGEFGDVML----GDYRGNKVAVKCI------------KNDATAQA 45
Query: 136 AEMEKKILKMLDHPFLPTLYAEF-EASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSAR 194
E ++ L H L L E IV E+ + G L +
Sbjct: 46 FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLL 105
Query: 195 FYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
++ +V A+EYL ++RDL NVLV D +SDF L+
Sbjct: 106 KFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLT 149
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 31/48 (64%)
Query: 195 FYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSN 242
++ ++L L+Y+H +++RDLKP N+L+ + + + DF L+ ++
Sbjct: 130 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLARVAD 177
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 49/122 (40%), Gaps = 22/122 (18%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHS-LRHKQPHKRFSL------T 191
E ++ D+P + L C++ E+ + GDL+ LR PH SL T
Sbjct: 100 EAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLST 159
Query: 192 SARF---------------YAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFD 236
AR A +V + YL ++RDL N LV + + ++DF
Sbjct: 160 RARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFG 219
Query: 237 LS 238
LS
Sbjct: 220 LS 221
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 79/204 (38%), Gaps = 57/204 (27%)
Query: 195 FYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXX 254
++ ++L L+Y+H +++RDLKP N+L+ + + + DF L+ ++
Sbjct: 132 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADP----------- 180
Query: 255 XXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVS 314
+T F+ E VA R Y +
Sbjct: 181 ------DHDHTG---------------------------FLXEXVATRW--------YRA 199
Query: 315 PEVA-SGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSP-SS 372
PE+ + + ++D W+ G + EM+ R F L +I+ L P+Q +
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI-LGSPSQEDLNC 258
Query: 373 MSEYHARDLISGL--LNKDPCNRL 394
+ AR+ + L NK P NRL
Sbjct: 259 IINLKARNYLLSLPHKNKVPWNRL 282
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 79/204 (38%), Gaps = 57/204 (27%)
Query: 195 FYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXX 254
++ ++L L+Y+H +++RDLKP N+L+ + + + DF L+ ++
Sbjct: 133 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADP----------- 181
Query: 255 XXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVS 314
+T F+ E VA R Y +
Sbjct: 182 ------DHDHTG---------------------------FLXEXVATRW--------YRA 200
Query: 315 PEVA-SGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSP-SS 372
PE+ + + ++D W+ G + EM+ R F L +I+ L P+Q +
Sbjct: 201 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI-LGSPSQEDLNC 259
Query: 373 MSEYHARDLISGL--LNKDPCNRL 394
+ AR+ + L NK P NRL
Sbjct: 260 IINLKARNYLLSLPHKNKVPWNRL 283
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 70/168 (41%), Gaps = 34/168 (20%)
Query: 82 FDLHRRIGAGDIGTVYLCS-------LNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXH 134
F L R+IG+G G +YL + + K + P LY
Sbjct: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLY----------------- 51
Query: 135 RAEMEKKILKMLDH-PFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSA 193
E KI ++L +P + +++ +VM+ G L L ++ SL +
Sbjct: 52 ----ESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL-GPSLEDL-FNFCSRKLSLKTV 105
Query: 194 RFYAAEVLVALEYLHMLGIIYRDLKPENVLV---RSDGHIMLSDFDLS 238
A +++ +E++H ++RD+KP+N L+ R + + DF L+
Sbjct: 106 LMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLA 153
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 28/44 (63%)
Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNA 243
+L+ +++H GII+RDLKP N L+ D + + DF L+ N+
Sbjct: 140 LLLGEKFIHESGIIHRDLKPANCLLNQDCSVKICDFGLARTINS 183
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/157 (21%), Positives = 58/157 (36%), Gaps = 15/157 (9%)
Query: 82 FDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKK 141
L R+GAG G V++ N GH + ++ E
Sbjct: 11 LKLVERLGAGQFGEVWMGYYN-------GHTKVAVKSLKQGSMSPDAFLA-------EAN 56
Query: 142 ILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVL 201
++K L H L LYA I+ E+ G L + ++ AA++
Sbjct: 57 LMKQLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIA 115
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ ++ I+R+L+ N+LV ++DF L+
Sbjct: 116 EGMAFIEERNYIHRNLRAANILVSDTLSCKIADFGLA 152
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 311 EYVSPEVASGGSHGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTLRNI 358
++ +PE + G+ D W+FGI + E++ +GR P+ +N ++N+
Sbjct: 171 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 219
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 87/241 (36%), Gaps = 57/241 (23%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E I+ +HP + L S I+ EF G L S + +F++
Sbjct: 65 EASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSF-LRLNDGQFTVIQLVGMLR 123
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS--LCSNAIXXXXXXXXXXXX 256
+ + YL + ++RDL N+LV S+ +SDF LS L N+
Sbjct: 124 GIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENS------------- 170
Query: 257 XXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPE 316
TYT ++ P R E +A R +
Sbjct: 171 ---SDPTYTSSLGGKI-----------------PIRWTAPEAIAFRKFT----------- 199
Query: 317 VASGGSHGNAVDWWAFGIFIYE-MIYGRTPFAAPSNETTLRNIVKK-PLTFPTQSPSSMS 374
+A D W++GI ++E M +G P+ SN+ + I + L P P+S+
Sbjct: 200 --------SASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYRLPPPPDCPTSLH 251
Query: 375 E 375
+
Sbjct: 252 Q 252
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 31/48 (64%)
Query: 195 FYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSN 242
++ ++L L+Y+H +++RDLKP N+L+ + + + DF L+ ++
Sbjct: 128 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLARVAD 175
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 31/48 (64%)
Query: 195 FYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSN 242
++ ++L L+Y+H +++RDLKP N+L+ + + + DF L+ ++
Sbjct: 132 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVAD 179
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 31/48 (64%)
Query: 195 FYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSN 242
++ ++L L+Y+H +++RDLKP N+L+ + + + DF L+ ++
Sbjct: 132 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVAD 179
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 79/204 (38%), Gaps = 57/204 (27%)
Query: 195 FYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXX 254
++ ++L L+Y+H +++RDLKP N+L+ + + + DF L+ ++
Sbjct: 132 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADP----------- 180
Query: 255 XXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVS 314
+T F+ E VA R Y +
Sbjct: 181 ------DHDHTG---------------------------FLTEYVATRW--------YRA 199
Query: 315 PEVA-SGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSP-SS 372
PE+ + + ++D W+ G + EM+ R F L +I+ L P+Q +
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI-LGSPSQEDLNC 258
Query: 373 MSEYHARDLISGL--LNKDPCNRL 394
+ AR+ + L NK P NRL
Sbjct: 259 IINLKARNYLLSLPHKNKVPWNRL 282
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 31/48 (64%)
Query: 195 FYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSN 242
++ ++L L+Y+H +++RDLKP N+L+ + + + DF L+ ++
Sbjct: 128 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVAD 175
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 91/234 (38%), Gaps = 55/234 (23%)
Query: 166 IVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLG--IIYRDLKPENVL 223
++ E C G + L+ + S + + A++++H II+RDLK EN+L
Sbjct: 111 LLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLL 170
Query: 224 VRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSK 283
+ + G I L DF +T +S + + + ++
Sbjct: 171 LSNQGTIKLCDFG-------------------------------SATTISHYPDYSWSAQ 199
Query: 284 KIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSH---GNAVDWWAFGIFIYEMI 340
+ R V E + + T Y +PE+ S+ G D WA G +Y +
Sbjct: 200 R-------RALVEEEITRNT-----TPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLC 247
Query: 341 YGRTPFAAPSNETTLRNIVKKPLTFPTQSPSSMSEYHARDLISGLLNKDPCNRL 394
+ + PF + LR IV + P + + +H+ LI +L +P RL
Sbjct: 248 FRQHPF---EDGAKLR-IVNGKYSIPPHD-TQYTVFHS--LIRAMLQVNPEERL 294
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 31/48 (64%)
Query: 195 FYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSN 242
++ ++L L+Y+H +++RDLKP N+L+ + + + DF L+ ++
Sbjct: 128 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVAD 175
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 29/44 (65%)
Query: 195 FYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
++ ++L L+Y+H +++RDLKP N+L+ + + + DF L+
Sbjct: 130 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLA 173
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 79/204 (38%), Gaps = 57/204 (27%)
Query: 195 FYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXX 254
++ ++L L+Y+H +++RDLKP N+L+ + + + DF L+ ++
Sbjct: 133 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADP----------- 181
Query: 255 XXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVS 314
+T F+ E VA R Y +
Sbjct: 182 ------DHDHTG---------------------------FLTEYVATRW--------YRA 200
Query: 315 PEVA-SGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSP-SS 372
PE+ + + ++D W+ G + EM+ R F L +I+ L P+Q +
Sbjct: 201 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI-LGSPSQEDLNC 259
Query: 373 MSEYHARDLISGL--LNKDPCNRL 394
+ AR+ + L NK P NRL
Sbjct: 260 IINLKARNYLLSLPHKNKVPWNRL 283
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 79/204 (38%), Gaps = 57/204 (27%)
Query: 195 FYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXX 254
++ ++L L+Y+H +++RDLKP N+L+ + + + DF L+ ++
Sbjct: 134 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADP----------- 182
Query: 255 XXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVS 314
+T F+ E VA R Y +
Sbjct: 183 ------DHDHTG---------------------------FLTEYVATRW--------YRA 201
Query: 315 PEVA-SGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSP-SS 372
PE+ + + ++D W+ G + EM+ R F L +I+ L P+Q +
Sbjct: 202 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI-LGSPSQEDLNC 260
Query: 373 MSEYHARDLISGL--LNKDPCNRL 394
+ AR+ + L NK P NRL
Sbjct: 261 IINLKARNYLLSLPHKNKVPWNRL 284
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 79/204 (38%), Gaps = 57/204 (27%)
Query: 195 FYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXX 254
++ ++L L+Y+H +++RDLKP N+L+ + + + DF L+ ++
Sbjct: 125 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADP----------- 173
Query: 255 XXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVS 314
+T F+ E VA R Y +
Sbjct: 174 ------DHDHTG---------------------------FLTEYVATRW--------YRA 192
Query: 315 PEVA-SGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSP-SS 372
PE+ + + ++D W+ G + EM+ R F L +I+ L P+Q +
Sbjct: 193 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI-LGSPSQEDLNC 251
Query: 373 MSEYHARDLISGL--LNKDPCNRL 394
+ AR+ + L NK P NRL
Sbjct: 252 IINLKARNYLLSLPHKNKVPWNRL 275
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 79/204 (38%), Gaps = 57/204 (27%)
Query: 195 FYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXX 254
++ ++L L+Y+H +++RDLKP N+L+ + + + DF L+ ++
Sbjct: 132 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADP----------- 180
Query: 255 XXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVS 314
+T F+ E VA R Y +
Sbjct: 181 ------DHDHTG---------------------------FLTEYVATRW--------YRA 199
Query: 315 PEVA-SGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSP-SS 372
PE+ + + ++D W+ G + EM+ R F L +I+ L P+Q +
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI-LGSPSQEDLNC 258
Query: 373 MSEYHARDLISGL--LNKDPCNRL 394
+ AR+ + L NK P NRL
Sbjct: 259 IINLKARNYLLSLPHKNKVPWNRL 282
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 79/204 (38%), Gaps = 57/204 (27%)
Query: 195 FYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXX 254
++ ++L L+Y+H +++RDLKP N+L+ + + + DF L+ ++
Sbjct: 126 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADP----------- 174
Query: 255 XXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVS 314
+T F+ E VA R Y +
Sbjct: 175 ------DHDHTG---------------------------FLTEYVATRW--------YRA 193
Query: 315 PEVA-SGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSP-SS 372
PE+ + + ++D W+ G + EM+ R F L +I+ L P+Q +
Sbjct: 194 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI-LGSPSQEDLNC 252
Query: 373 MSEYHARDLISGL--LNKDPCNRL 394
+ AR+ + L NK P NRL
Sbjct: 253 IINLKARNYLLSLPHKNKVPWNRL 276
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 29/44 (65%)
Query: 195 FYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
++ ++L L+Y+H +++RDLKP N+L+ + + + DF L+
Sbjct: 130 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLA 173
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 79/204 (38%), Gaps = 57/204 (27%)
Query: 195 FYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXX 254
++ ++L L+Y+H +++RDLKP N+L+ + + + DF L+ ++
Sbjct: 148 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADP----------- 196
Query: 255 XXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVS 314
+T F+ E VA R Y +
Sbjct: 197 ------DHDHTG---------------------------FLTEYVATRW--------YRA 215
Query: 315 PEVA-SGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSP-SS 372
PE+ + + ++D W+ G + EM+ R F L +I+ L P+Q +
Sbjct: 216 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI-LGSPSQEDLNC 274
Query: 373 MSEYHARDLISGL--LNKDPCNRL 394
+ AR+ + L NK P NRL
Sbjct: 275 IINLKARNYLLSLPHKNKVPWNRL 298
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 29/44 (65%)
Query: 195 FYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
++ ++L L+Y+H +++RDLKP N+L+ + + + DF L+
Sbjct: 132 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLA 175
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 52/122 (42%), Gaps = 22/122 (18%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHS-LRHKQ-------------- 183
E +LK ++HP + LY +++E+ G L LR +
Sbjct: 76 EFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRN 135
Query: 184 ------PHKR-FSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFD 236
P +R ++ +A ++ ++YL + +++RDL N+LV + +SDF
Sbjct: 136 SSSLDHPDERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFG 195
Query: 237 LS 238
LS
Sbjct: 196 LS 197
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 79/204 (38%), Gaps = 57/204 (27%)
Query: 195 FYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXX 254
++ ++L L+Y+H +++RDLKP N+L+ + + + DF L+ ++
Sbjct: 136 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADP----------- 184
Query: 255 XXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVS 314
+T F+ E VA R Y +
Sbjct: 185 ------DHDHTG---------------------------FLTEYVATRW--------YRA 203
Query: 315 PEVA-SGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSP-SS 372
PE+ + + ++D W+ G + EM+ R F L +I+ L P+Q +
Sbjct: 204 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI-LGSPSQEDLNC 262
Query: 373 MSEYHARDLISGL--LNKDPCNRL 394
+ AR+ + L NK P NRL
Sbjct: 263 IINLKARNYLLSLPHKNKVPWNRL 286
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 79/204 (38%), Gaps = 57/204 (27%)
Query: 195 FYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXX 254
++ ++L L+Y+H +++RDLKP N+L+ + + + DF L+ ++
Sbjct: 128 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADP----------- 176
Query: 255 XXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVS 314
+T F+ E VA R Y +
Sbjct: 177 ------DHDHTG---------------------------FLTEYVATRW--------YRA 195
Query: 315 PEVA-SGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPLTFPTQSP-SS 372
PE+ + + ++D W+ G + EM+ R F L +I+ L P+Q +
Sbjct: 196 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI-LGSPSQEDLNC 254
Query: 373 MSEYHARDLISGL--LNKDPCNRL 394
+ AR+ + L NK P NRL
Sbjct: 255 IINLKARNYLLSLPHKNKVPWNRL 278
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 29/44 (65%)
Query: 195 FYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
++ ++L L+Y+H +++RDLKP N+L+ + + + DF L+
Sbjct: 128 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLA 171
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 29/44 (65%)
Query: 195 FYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
++ ++L L+Y+H +++RDLKP N+L+ + + + DF L+
Sbjct: 126 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLA 169
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 64/324 (19%), Positives = 105/324 (32%), Gaps = 80/324 (24%)
Query: 84 LHRRIGAGDIGTVYLCSLNNKY-RQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEKKI 142
L R +G G G V+L N QD+ L A+ HR E ++
Sbjct: 17 LKRELGEGAFGKVFLAECYNLCPEQDK-----ILVAVKTLKDASDNARKDFHR---EAEL 68
Query: 143 LKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHS-----------LRHKQPHKRFSLT 191
L L H + Y + +V E+ GDL+ + P + +
Sbjct: 69 LTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQS 128
Query: 192 SARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXX 251
A ++ + YL ++RDL N LV + + + DF +S
Sbjct: 129 QMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMS------------- 175
Query: 252 XXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHE 311
Y+ Y R G T+ P R E + R +
Sbjct: 176 ---------RDVYSTDYY--------RVGG----HTMLPIRWMPPESIMYRKFT------ 208
Query: 312 YVSPEVASGGSHGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTLRNIVK-KPLTFPTQS 369
D W+ G+ ++E+ YG+ P+ SN + I + + L P
Sbjct: 209 -------------TESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQRPRTC 255
Query: 370 PSSMSEYHARDLISGLLNKDPCNR 393
P + E L+ G ++P R
Sbjct: 256 PQEVYE-----LMLGCWQREPHMR 274
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 200 VLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNA 243
+L+ ++H GII+RDLKP N L+ D + + DF L+ N+
Sbjct: 138 LLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINS 181
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 52/122 (42%), Gaps = 22/122 (18%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHS-LRHKQ-------------- 183
E +LK ++HP + LY +++E+ G L LR +
Sbjct: 76 EFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRN 135
Query: 184 ------PHKR-FSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFD 236
P +R ++ +A ++ ++YL + +++RDL N+LV + +SDF
Sbjct: 136 SSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFG 195
Query: 237 LS 238
LS
Sbjct: 196 LS 197
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 52/122 (42%), Gaps = 22/122 (18%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHS-LRHKQ-------------- 183
E +LK ++HP + LY +++E+ G L LR +
Sbjct: 76 EFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRN 135
Query: 184 ------PHKR-FSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFD 236
P +R ++ +A ++ ++YL + +++RDL N+LV + +SDF
Sbjct: 136 SSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFG 195
Query: 237 LS 238
LS
Sbjct: 196 LS 197
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 74/206 (35%), Gaps = 64/206 (31%)
Query: 164 SCIVMEFCSGGDLHS-LRHKQPHKRF-------SLTSARFYAAEVLVALEYLHMLGIIYR 215
+ +VME + GDL S LR +P +L AAE+ + YL+ ++R
Sbjct: 96 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHR 155
Query: 216 DLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYTRQ-YSTRLSR 274
+L N +V D + + DF + TR Y T R
Sbjct: 156 NLAARNCMVAHDFTVKIGDFGM---------------------------TRDIYETDYYR 188
Query: 275 FLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGI 334
K + L P R +++PE G + D W+FG+
Sbjct: 189 --------KGGKGLLPVR-------------------WMAPESLKDGVFTTSSDMWSFGV 221
Query: 335 FIYEMI-YGRTPFAAPSNETTLRNIV 359
++E+ P+ SNE L+ ++
Sbjct: 222 VLWEITSLAEQPYQGLSNEQVLKFVM 247
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 36.6 bits (83), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 74/206 (35%), Gaps = 64/206 (31%)
Query: 164 SCIVMEFCSGGDLHS-LRHKQPHKRF-------SLTSARFYAAEVLVALEYLHMLGIIYR 215
+ +VME + GDL S LR +P +L AAE+ + YL+ ++R
Sbjct: 95 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHR 154
Query: 216 DLKPENVLVRSDGHIMLSDFDLSLCSNAIXXXXXXXXXXXXXXXRSQTYTRQ-YSTRLSR 274
+L N +V D + + DF + TR Y T R
Sbjct: 155 NLAARNCMVAHDFTVKIGDFGM---------------------------TRDIYETDYYR 187
Query: 275 FLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGI 334
K + L P R +++PE G + D W+FG+
Sbjct: 188 --------KGGKGLLPVR-------------------WMAPESLKDGVFTTSSDMWSFGV 220
Query: 335 FIYEMI-YGRTPFAAPSNETTLRNIV 359
++E+ P+ SNE L+ ++
Sbjct: 221 VLWEITSLAEQPYQGLSNEQVLKFVM 246
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 36.2 bits (82), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 8/83 (9%)
Query: 164 SCIVMEFCSGGDLHS-LRHKQPHKRF-------SLTSARFYAAEVLVALEYLHMLGIIYR 215
+ +VME + GDL S LR +P +L AAE+ + YL+ ++R
Sbjct: 92 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHR 151
Query: 216 DLKPENVLVRSDGHIMLSDFDLS 238
DL N +V D + + DF ++
Sbjct: 152 DLAARNCMVAHDFTVKIGDFGMT 174
Score = 32.3 bits (72), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 13/49 (26%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 312 YVSPEVASGGSHGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTLRNIV 359
+++PE G + D W+FG+ ++E+ P+ SNE L+ ++
Sbjct: 195 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVM 243
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 36.2 bits (82), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 8/83 (9%)
Query: 164 SCIVMEFCSGGDLHS-LRHKQPHKRF-------SLTSARFYAAEVLVALEYLHMLGIIYR 215
+ +VME + GDL S LR +P +L AAE+ + YL+ ++R
Sbjct: 95 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHR 154
Query: 216 DLKPENVLVRSDGHIMLSDFDLS 238
DL N +V D + + DF ++
Sbjct: 155 DLAARNCMVAHDFTVKIGDFGMT 177
Score = 32.3 bits (72), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 13/49 (26%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 312 YVSPEVASGGSHGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTLRNIV 359
+++PE G + D W+FG+ ++E+ P+ SNE L+ ++
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVM 246
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 36.2 bits (82), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 8/83 (9%)
Query: 164 SCIVMEFCSGGDLHS-LRHKQPHKRF-------SLTSARFYAAEVLVALEYLHMLGIIYR 215
+ +VME + GDL S LR +P +L AAE+ + YL+ ++R
Sbjct: 95 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHR 154
Query: 216 DLKPENVLVRSDGHIMLSDFDLS 238
DL N +V D + + DF ++
Sbjct: 155 DLAARNCMVAHDFTVKIGDFGMT 177
Score = 32.3 bits (72), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 13/49 (26%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 312 YVSPEVASGGSHGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTLRNIV 359
+++PE G + D W+FG+ ++E+ P+ SNE L+ ++
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVM 246
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 36.2 bits (82), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARF-YA 197
E I+ +DHP L L + +V + G L H+ HK + +
Sbjct: 90 EALIMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHE--HKDNIGSQLLLNWC 146
Query: 198 AEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
++ + YL +++RDL NVLV+S H+ ++DF L+
Sbjct: 147 VQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLA 187
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 36.2 bits (82), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 27/43 (62%)
Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ ++ + YL + +++RDL NVLV+S H+ ++DF L+
Sbjct: 124 WCMQIAKGMSYLEDVRLVHRDLAARNVLVKSPNHVKITDFGLA 166
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 36.2 bits (82), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 8/83 (9%)
Query: 164 SCIVMEFCSGGDLHS-LRHKQPHKRF-------SLTSARFYAAEVLVALEYLHMLGIIYR 215
+ ++ME + GDL S LR +P SL+ A E+ + YL+ ++R
Sbjct: 97 TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHR 156
Query: 216 DLKPENVLVRSDGHIMLSDFDLS 238
DL N +V D + + DF ++
Sbjct: 157 DLAARNCMVAEDFTVKIGDFGMT 179
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 312 YVSPEVASGGSHGNAVDWWAFGIFIYEM-IYGRTPFAAPSNETTLRNIVKKPL 363
++SPE G D W+FG+ ++E+ P+ SNE LR +++ L
Sbjct: 200 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGL 252
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 35.8 bits (81), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 8/83 (9%)
Query: 164 SCIVMEFCSGGDLHS-LRHKQPHKRF-------SLTSARFYAAEVLVALEYLHMLGIIYR 215
+ ++ME + GDL S LR +P SL+ A E+ + YL+ ++R
Sbjct: 88 TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHR 147
Query: 216 DLKPENVLVRSDGHIMLSDFDLS 238
DL N +V D + + DF ++
Sbjct: 148 DLAARNCMVAEDFTVKIGDFGMT 170
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 312 YVSPEVASGGSHGNAVDWWAFGIFIYEM-IYGRTPFAAPSNETTLRNIVKKPL 363
++SPE G D W+FG+ ++E+ P+ SNE LR +++ L
Sbjct: 191 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGL 243
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 35.4 bits (80), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSD-GHIMLSDF 235
AR + +VL A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 131 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 174
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 48/109 (44%), Gaps = 16/109 (14%)
Query: 305 SFVGTHEYVSPE-VASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPL 363
F GT Y PE + HG + W+ GI +Y+M+ G PF +E +R V
Sbjct: 187 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEIIRGQV---- 240
Query: 364 TFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGL 412
F Q SS ++ LI L P +R + +++ HP+ + +
Sbjct: 241 -FFRQRVSSECQH----LIRWCLALRPSDRPTFE----EIQNHPWMQDV 280
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 35.4 bits (80), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSD-GHIMLSDF 235
AR + +VL A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 132 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 175
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Query: 305 SFVGTHEYVSPE-VASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIV 359
F GT Y PE + HG + W+ GI +Y+M+ G PF +E +R V
Sbjct: 188 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEIIRGQV 241
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 35.4 bits (80), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSD-GHIMLSDF 235
AR + +VL A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 132 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 175
Score = 33.1 bits (74), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Query: 305 SFVGTHEYVSPE-VASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIV 359
F GT Y PE + HG + W+ GI +Y+M+ G PF +E +R V
Sbjct: 188 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEIIRGQV 241
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 35.4 bits (80), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSD-GHIMLSDF 235
AR + +VL A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 131 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 174
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Query: 305 SFVGTHEYVSPE-VASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIV 359
F GT Y PE + HG + W+ GI +Y+M+ G PF +E +R V
Sbjct: 187 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEIIRGQV 240
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 35.4 bits (80), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSD-GHIMLSDF 235
AR + +VL A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 151 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 194
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Query: 305 SFVGTHEYVSPE-VASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIV 359
F GT Y PE + HG + W+ GI +Y+M+ G PF +E +R V
Sbjct: 207 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEIIRGQV 260
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 35.4 bits (80), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 13/118 (11%)
Query: 134 HRAEM-EKKILKMLDHPF--LPTLYAEFEASNFSCIVMEFCSGGDLHS-LRHKQ----PH 185
HRA M E KIL + H + L A + +++EFC G+L + LR K+ P+
Sbjct: 74 HRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPY 133
Query: 186 KRF-----SLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
K +L Y+ +V +E+L I+RDL N+L+ + + DF L+
Sbjct: 134 KDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLA 191
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 35.4 bits (80), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 44/100 (44%), Gaps = 2/100 (2%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E I+ +DHP L L + +V + G L H+ S +
Sbjct: 67 EALIMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLN-WCV 124
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
++ + YL +++RDL NVLV+S H+ ++DF L+
Sbjct: 125 QIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLA 164
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 35.4 bits (80), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSD-GHIMLSDF 235
AR + +VL A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 159 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 202
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 47/107 (43%), Gaps = 16/107 (14%)
Query: 305 SFVGTHEYVSPE-VASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPL 363
F GT Y PE + HG + W+ GI +Y+M+ G PF +E +R V
Sbjct: 215 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEIIRGQV---- 268
Query: 364 TFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFK 410
F Q SS ++ LI L P +R + +++ HP+ +
Sbjct: 269 -FFRQRVSSECQH----LIRWCLALRPSDRPTFE----EIQNHPWMQ 306
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 35.4 bits (80), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSD-GHIMLSDF 235
AR + +VL A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 117 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 160
Score = 33.1 bits (74), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Query: 305 SFVGTHEYVSPE-VASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIV 359
F GT Y PE + HG + W+ GI +Y+M+ G PF +E +R V
Sbjct: 173 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEIIRGQV 226
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 35.4 bits (80), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSD-GHIMLSDF 235
AR + +VL A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 132 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 175
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Query: 305 SFVGTHEYVSPE-VASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIV 359
F GT Y PE + HG + W+ GI +Y+M+ G PF +E +R V
Sbjct: 188 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEIIRGQV 241
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 35.4 bits (80), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSD-GHIMLSDF 235
AR + +VL A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 144 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 187
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 48/109 (44%), Gaps = 16/109 (14%)
Query: 305 SFVGTHEYVSPE-VASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPL 363
F GT Y PE + HG + W+ GI +Y+M+ G PF +E +R V
Sbjct: 200 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEIIRGQV---- 253
Query: 364 TFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGL 412
F Q SS ++ LI L P +R + +++ HP+ + +
Sbjct: 254 -FFRQRVSSECQH----LIRWCLALRPSDRPTFE----EIQNHPWMQDV 293
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 35.4 bits (80), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSD-GHIMLSDF 235
AR + +VL A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 145 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 188
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Query: 306 FVGTHEYVSPE-VASGGSHGNAVDWWAFGIFIYEMIYGRTPF 346
F GT Y PE + HG + W+ GI +Y+M+ G PF
Sbjct: 202 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 243
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 35.4 bits (80), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSD-GHIMLSDF 235
AR + +VL A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 145 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 188
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Query: 306 FVGTHEYVSPE-VASGGSHGNAVDWWAFGIFIYEMIYGRTPF 346
F GT Y PE + HG + W+ GI +Y+M+ G PF
Sbjct: 202 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 243
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 35.4 bits (80), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSD-GHIMLSDF 235
AR + +VL A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 144 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 187
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 305 SFVGTHEYVSPE-VASGGSHGNAVDWWAFGIFIYEMIYGRTPF 346
F GT Y PE + HG + W+ GI +Y+M+ G PF
Sbjct: 200 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 242
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 35.4 bits (80), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 58/157 (36%), Gaps = 14/157 (8%)
Query: 85 HRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEM--EKKI 142
+ IGAG+ G VY L K + P + + R + E I
Sbjct: 49 QKVIGAGEFGEVYKGML--KTSSGKKEVPVAIKTLKAGYTEK-------QRVDFLGEAGI 99
Query: 143 LKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHS-LRHKQPHKRFSLTSARFYAAEVL 201
+ H + L I+ E+ G L LR K FS+ +
Sbjct: 100 MGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGE--FSVLQLVGMLRGIA 157
Query: 202 VALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
++YL + ++RDL N+LV S+ +SDF LS
Sbjct: 158 AGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLS 194
Score = 35.0 bits (79), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 312 YVSPEVASGGSHGNAVDWWAFGIFIYE-MIYGRTPFAAPSNETTLRNI 358
+ +PE S +A D W+FGI ++E M YG P+ SN ++ I
Sbjct: 216 WTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAI 263
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 35.4 bits (80), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 13/118 (11%)
Query: 134 HRAEM-EKKILKMLDHPF--LPTLYAEFEASNFSCIVMEFCSGGDLHS-LRHKQ----PH 185
HRA M E KIL + H + L A + +++EFC G+L + LR K+ P+
Sbjct: 74 HRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPY 133
Query: 186 KRF-----SLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
K +L Y+ +V +E+L I+RDL N+L+ + + DF L+
Sbjct: 134 KDLYKDFLTLEHLICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLA 191
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 35.4 bits (80), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSD-GHIMLSDF 235
AR + +VL A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 145 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 188
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 305 SFVGTHEYVSPE-VASGGSHGNAVDWWAFGIFIYEMIYGRTPF 346
F GT Y PE + HG + W+ GI +Y+M+ G PF
Sbjct: 201 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 243
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 35.4 bits (80), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSD-GHIMLSDF 235
AR + +VL A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 159 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 202
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 48/109 (44%), Gaps = 16/109 (14%)
Query: 305 SFVGTHEYVSPE-VASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPL 363
F GT Y PE + HG + W+ GI +Y+M+ G PF +E +R V
Sbjct: 215 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEIIRGQV---- 268
Query: 364 TFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGL 412
F Q SS ++ LI L P +R + +++ HP+ + +
Sbjct: 269 -FFRQRVSSECQH----LIRWCLALRPSDRPTFE----EIQNHPWMQDV 308
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 35.4 bits (80), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSD-GHIMLSDF 235
AR + +VL A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 144 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 187
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 305 SFVGTHEYVSPE-VASGGSHGNAVDWWAFGIFIYEMIYGRTPF 346
F GT Y PE + HG + W+ GI +Y+M+ G PF
Sbjct: 200 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 242
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 35.4 bits (80), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSD-GHIMLSDF 235
AR + +VL A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 145 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 188
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 305 SFVGTHEYVSPE-VASGGSHGNAVDWWAFGIFIYEMIYGRTPF 346
F GT Y PE + HG + W+ GI +Y+M+ G PF
Sbjct: 201 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 243
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 35.4 bits (80), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSD-GHIMLSDF 235
AR + +VL A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 144 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 187
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 305 SFVGTHEYVSPE-VASGGSHGNAVDWWAFGIFIYEMIYGRTPF 346
F GT Y PE + HG + W+ GI +Y+M+ G PF
Sbjct: 200 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 242
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 35.4 bits (80), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 40/99 (40%), Gaps = 2/99 (2%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E + LDH L LY + G L LR Q H F L + YA
Sbjct: 65 EVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGH--FLLGTLSRYAV 122
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDL 237
+V + YL I+RDL N+L+ + + + DF L
Sbjct: 123 QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL 161
Score = 32.3 bits (72), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 312 YVSPEVASGGSHGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTLRNIVKKPLTFP 366
+ +PE + +A D W FG+ ++EM YG+ P+ + L I K+ P
Sbjct: 184 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP 239
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 35.4 bits (80), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSD-GHIMLSDF 235
AR + +VL A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 164 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 207
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Query: 305 SFVGTHEYVSPE-VASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIV 359
F GT Y PE + HG + W+ GI +Y+M+ G PF +E +R V
Sbjct: 220 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEIIRGQV 273
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 35.4 bits (80), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSD-GHIMLSDF 235
AR + +VL A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 159 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 202
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Query: 305 SFVGTHEYVSPE-VASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIV 359
F GT Y PE + HG + W+ GI +Y+M+ G PF +E +R V
Sbjct: 215 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEIIRGQV 268
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 35.4 bits (80), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSD-GHIMLSDF 235
AR + +VL A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 117 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 160
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 48/109 (44%), Gaps = 16/109 (14%)
Query: 305 SFVGTHEYVSPE-VASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPL 363
F GT Y PE + HG + W+ GI +Y+M+ G PF +E +R V
Sbjct: 173 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEIIRGQV---- 226
Query: 364 TFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGL 412
F Q SS ++ LI L P +R + +++ HP+ + +
Sbjct: 227 -FFRQRVSSECQH----LIRWCLALRPSDRPTFE----EIQNHPWMQDV 266
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 35.4 bits (80), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSD-GHIMLSDF 235
AR + +VL A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 116 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 159
Score = 33.1 bits (74), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 48/109 (44%), Gaps = 16/109 (14%)
Query: 305 SFVGTHEYVSPE-VASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPL 363
F GT Y PE + HG + W+ GI +Y+M+ G PF +E +R V
Sbjct: 172 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEIIRGQV---- 225
Query: 364 TFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGL 412
F Q SS ++ LI L P +R + +++ HP+ + +
Sbjct: 226 -FFRQRVSSECQH----LIRWCLALRPSDRPTFE----EIQNHPWMQDV 265
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 35.4 bits (80), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSD-GHIMLSDF 235
AR + +VL A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 116 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 159
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 48/109 (44%), Gaps = 16/109 (14%)
Query: 305 SFVGTHEYVSPE-VASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPL 363
F GT Y PE + HG + W+ GI +Y+M+ G PF +E +R V
Sbjct: 172 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEIIRGQV---- 225
Query: 364 TFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGL 412
F Q SS ++ LI L P +R + +++ HP+ + +
Sbjct: 226 -FFRQRVSSECQH----LIRWCLALRPSDRPTFE----EIQNHPWMQDV 265
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 35.0 bits (79), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSD-GHIMLSDF 235
AR + +VL A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 117 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 160
Score = 33.1 bits (74), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 48/109 (44%), Gaps = 16/109 (14%)
Query: 305 SFVGTHEYVSPE-VASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPL 363
F GT Y PE + HG + W+ GI +Y+M+ G PF +E +R V
Sbjct: 173 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEIIRGQV---- 226
Query: 364 TFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGL 412
F Q SS ++ LI L P +R + +++ HP+ + +
Sbjct: 227 -FFRQRVSSECQH----LIRWCLALRPSDRPTFE----EIQNHPWMQDV 266
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 35.0 bits (79), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSD-GHIMLSDF 235
AR + +VL A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 139 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 182
Score = 33.1 bits (74), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Query: 305 SFVGTHEYVSPE-VASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIV 359
F GT Y PE + HG + W+ GI +Y+M+ G PF +E +R V
Sbjct: 195 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEIIRGQV 248
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 35.0 bits (79), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 40/99 (40%), Gaps = 2/99 (2%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E + LDH L LY + G L LR Q H F L + YA
Sbjct: 71 EVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGH--FLLGTLSRYAV 128
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDL 237
+V + YL I+RDL N+L+ + + + DF L
Sbjct: 129 QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL 167
Score = 32.3 bits (72), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 312 YVSPEVASGGSHGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTLRNIVKKPLTFP 366
+ +PE + +A D W FG+ ++EM YG+ P+ + L I K+ P
Sbjct: 190 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP 245
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 35.0 bits (79), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSD-GHIMLSDF 235
AR + +VL A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 115 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 158
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 48/109 (44%), Gaps = 16/109 (14%)
Query: 305 SFVGTHEYVSPE-VASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPL 363
F GT Y PE + HG + W+ GI +Y+M+ G PF +E +R V
Sbjct: 171 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEIIRGQV---- 224
Query: 364 TFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGL 412
F Q SS ++ LI L P +R + +++ HP+ + +
Sbjct: 225 -FFRQRVSSECQH----LIRWCLALRPSDRPTFE----EIQNHPWMQDV 264
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 35.0 bits (79), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 60/168 (35%), Gaps = 39/168 (23%)
Query: 188 FSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIXXX 247
+ + R A ++ A+++LH + + DLKPEN+L + SD++L+
Sbjct: 134 YPIHQVRHMAFQLCQAVKFLHDNKLTHTDLKPENIL------FVNSDYELTY-------- 179
Query: 248 XXXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSFV 307
R + + + R+ F + F + T+ V
Sbjct: 180 -------NLEKKRDERSVKSTAVRVVDFGSATFDHEHHSTI------------------V 214
Query: 308 GTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
T Y +PEV D W+ G I+E G T F N L
Sbjct: 215 STRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHL 262
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 35.0 bits (79), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSD-GHIMLSDF 235
AR + +VL A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 112 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 155
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 48/109 (44%), Gaps = 16/109 (14%)
Query: 305 SFVGTHEYVSPE-VASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIVKKPL 363
F GT Y PE + HG + W+ GI +Y+M+ G PF +E +R V
Sbjct: 168 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEIIRGQV---- 221
Query: 364 TFPTQSPSSMSEYHARDLISGLLNKDPCNRLGSKRGAADVKTHPFFKGL 412
F Q SS ++ LI L P +R + +++ HP+ + +
Sbjct: 222 -FFRQRVSSECQH----LIRWCLALRPSDRPTFE----EIQNHPWMQDV 261
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 35.0 bits (79), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSD-GHIMLSDF 235
AR + +VL A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 112 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 155
Score = 32.3 bits (72), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 305 SFVGTHEYVSPE-VASGGSHGNAVDWWAFGIFIYEMIYGRTPF 346
F GT Y PE + HG + W+ GI +Y+M+ G PF
Sbjct: 168 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 210
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 35.0 bits (79), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 42/88 (47%), Gaps = 12/88 (13%)
Query: 312 YVSPEVASG---GSHGNAVDWWAFGIFIYEMIYGRTPFAAPSN-ETTLRNIVK--KPLTF 365
+V+PE ++ + D W+F + ++E++ PFA SN E ++ ++ +P
Sbjct: 174 WVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTIP 233
Query: 366 PTQSPSSMSEYHARDLISGLLNKDPCNR 393
P SP H L+ +N+DP R
Sbjct: 234 PGISP------HVSKLMKICMNEDPAKR 255
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 35.0 bits (79), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 21/29 (72%)
Query: 210 LGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
L II+RD+KP N+L+ G+I L DF +S
Sbjct: 145 LKIIHRDIKPSNILLDRSGNIKLCDFGIS 173
Score = 29.6 bits (65), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
Query: 308 GTHEYVSPE----VASGGSHGNAVDWWAFGIFIYEMIYGRTPF 346
G Y++PE AS + D W+ GI +YE+ GR P+
Sbjct: 187 GCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPY 229
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 35.0 bits (79), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSD-GHIMLSDF 235
AR + +VL A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 112 ARSFFWQVLEAVRHCHNXGVLHRDIKDENILIDLNRGELKLIDF 155
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Query: 305 SFVGTHEYVSPE-VASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTLRNIV 359
F GT Y PE + HG + W+ GI +Y+M+ G PF +E +R V
Sbjct: 168 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEIIRGQV 221
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 35.0 bits (79), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 40/99 (40%), Gaps = 2/99 (2%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E + LDH L LY + G L LR Q H F L + YA
Sbjct: 71 EVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGH--FLLGTLSRYAV 128
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDL 237
+V + YL I+RDL N+L+ + + + DF L
Sbjct: 129 QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL 167
Score = 32.3 bits (72), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 312 YVSPEVASGGSHGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTLRNIVKKPLTFP 366
+ +PE + +A D W FG+ ++EM YG+ P+ + L I K+ P
Sbjct: 190 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP 245
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 35.0 bits (79), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 40/99 (40%), Gaps = 2/99 (2%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E + LDH L LY + G L LR Q H F L + YA
Sbjct: 61 EVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGH--FLLGTLSRYAV 118
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDL 237
+V + YL I+RDL N+L+ + + + DF L
Sbjct: 119 QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL 157
Score = 32.7 bits (73), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 312 YVSPEVASGGSHGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTLRNIVKKPLTFP 366
+ +PE + +A D W FG+ ++EM YG+ P+ + L I K+ P
Sbjct: 180 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP 235
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 35.0 bits (79), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 40/99 (40%), Gaps = 2/99 (2%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E + LDH L LY + G L LR Q H F L + YA
Sbjct: 65 EVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGH--FLLGTLSRYAV 122
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDL 237
+V + YL I+RDL N+L+ + + + DF L
Sbjct: 123 QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL 161
Score = 32.7 bits (73), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 312 YVSPEVASGGSHGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTLRNIVKKPLTFP 366
+ +PE + +A D W FG+ ++EM YG+ P+ + L I K+ P
Sbjct: 184 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP 239
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 35.0 bits (79), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 40/99 (40%), Gaps = 2/99 (2%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E + LDH L LY + G L LR Q H F L + YA
Sbjct: 61 EVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGH--FLLGTLSRYAV 118
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDL 237
+V + YL I+RDL N+L+ + + + DF L
Sbjct: 119 QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL 157
Score = 32.7 bits (73), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 312 YVSPEVASGGSHGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTLRNIVKKPLTFP 366
+ +PE + +A D W FG+ ++EM YG+ P+ + L I K+ P
Sbjct: 180 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP 235
>pdb|2KTY|A Chain A, Solution Structure Of Human Vaccinia Related Kinase-1
pdb|2KUL|A Chain A, Solution Structure Of Human Vaccinia Related Kinase
1(Vrk1)
Length = 368
Score = 34.7 bits (78), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 83/199 (41%), Gaps = 23/199 (11%)
Query: 52 SLKPHRSSDFAYSAIRSATFGRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGH 111
S K H + FA I T + +++ + IG G G +YL +N+ + G
Sbjct: 14 SAKRHLAEQFAVGEII-------TDMAKKEWKVGLPIGQGGFGCIYLADMNSS--ESVGS 64
Query: 112 E-PCCLYAMXXXXXXXXXXXXXXHRAEMEKKILKM-----LDHPFLPTLYA----EFEAS 161
+ PC + RA ++I K L + +P + +
Sbjct: 65 DAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGLHDKNGK 124
Query: 162 NFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPEN 221
++ ++M+ G DL + ++ KRFS + + +L LEY+H ++ D+K N
Sbjct: 125 SYRFMIMDRF-GSDLQKI-YEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASN 182
Query: 222 VLV--RSDGHIMLSDFDLS 238
+L+ ++ + L D+ L+
Sbjct: 183 LLLNYKNPDQVYLVDYGLA 201
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 40/99 (40%), Gaps = 2/99 (2%)
Query: 139 EKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAA 198
E + LDH L LY + G L LR Q H F L + YA
Sbjct: 61 EVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGH--FLLGTLSRYAV 118
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDL 237
+V + YL I+RDL N+L+ + + + DF L
Sbjct: 119 QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL 157
Score = 32.7 bits (73), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 312 YVSPEVASGGSHGNAVDWWAFGIFIYEMI-YGRTPFAAPSNETTLRNIVKKPLTFP 366
+ +PE + +A D W FG+ ++EM YG+ P+ + L I K+ P
Sbjct: 180 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP 235
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 21/30 (70%)
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLVRSDG 228
++L + YLH +++RDLKP N+LV +G
Sbjct: 136 QILDGIHYLHANWVLHRDLKPANILVMGEG 165
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 56/121 (46%), Gaps = 16/121 (13%)
Query: 134 HRAEM-EKKILKMLDHPF--LPTLYAEFEASNFSCIVMEFCSGGDLHS-LRHKQ----PH 185
HRA M E KIL + H + L A + +++EFC G+L + LR K+ P+
Sbjct: 75 HRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPY 134
Query: 186 KR--------FSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDL 237
K +L Y+ +V +E+L I+RDL N+L+ + + DF L
Sbjct: 135 KTPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL 194
Query: 238 S 238
+
Sbjct: 195 A 195
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 56/122 (45%), Gaps = 17/122 (13%)
Query: 134 HRAEM-EKKILKMLDHPF--LPTLYAEFEASNFSCIVMEFCSGGDLHS-LRHKQ----PH 185
HRA M E KIL + H + L A + +++EFC G+L + LR K+ P+
Sbjct: 76 HRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPY 135
Query: 186 KR---------FSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFD 236
K +L Y+ +V +E+L I+RDL N+L+ + + DF
Sbjct: 136 KEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFG 195
Query: 237 LS 238
L+
Sbjct: 196 LA 197
>pdb|2LAV|A Chain A, Nmr Solution Structure Of Human Vaccinia-Related Kinase 1
Length = 361
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 83/199 (41%), Gaps = 23/199 (11%)
Query: 52 SLKPHRSSDFAYSAIRSATFGRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGH 111
S K H + FA I T + +++ + IG G G +YL +N+ + G
Sbjct: 14 SAKRHLAEQFAVGEII-------TDMAKKEWKVGLPIGQGGFGCIYLADMNSS--ESVGS 64
Query: 112 E-PCCLYAMXXXXXXXXXXXXXXHRAEMEKKILKM-----LDHPFLPTLYA----EFEAS 161
+ PC + RA ++I K L + +P + +
Sbjct: 65 DAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGLHDKNGK 124
Query: 162 NFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPEN 221
++ ++M+ G DL + ++ KRFS + + +L LEY+H ++ D+K N
Sbjct: 125 SYRFMIMDRF-GSDLQKI-YEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASN 182
Query: 222 VLV--RSDGHIMLSDFDLS 238
+L+ ++ + L D+ L+
Sbjct: 183 LLLNYKNPDQVYLVDYGLA 201
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 79/229 (34%), Gaps = 52/229 (22%)
Query: 136 AEMEKKILKML-----DHPFLPTLYAE-FEASNFSCIVMEFCSGGDLHSLRHK--QPHKR 187
A +E +LK + ++ FL L ++ F CI E L+ QP
Sbjct: 63 ARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQP--- 119
Query: 188 FSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVL-VRSDGHIMLSDFDLSLCSNAIXX 246
+ L R A ++ AL +LH + + DLKPEN+L V S+ + ++
Sbjct: 120 YPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSC-------- 171
Query: 247 XXXXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSF 306
+ + S R++ F + F + T+
Sbjct: 172 --------------EEKSVKNTSIRVADFGSATFDHEHHTTI------------------ 199
Query: 307 VGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
V T Y PEV D W+ G ++E G T F N L
Sbjct: 200 VATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHL 248
>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7
Length = 297
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 26/39 (66%)
Query: 186 KRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLV 224
++FS+ + A ++L ++ +H ++YRD+KP+N L+
Sbjct: 100 RKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLI 138
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 79/229 (34%), Gaps = 52/229 (22%)
Query: 136 AEMEKKILKML-----DHPFLPTLYAE-FEASNFSCIVMEFCSGGDLHSLRHK--QPHKR 187
A +E +LK + ++ FL L ++ F CI E L+ QP
Sbjct: 72 ARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQP--- 128
Query: 188 FSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVL-VRSDGHIMLSDFDLSLCSNAIXX 246
+ L R A ++ AL +LH + + DLKPEN+L V S+ + ++
Sbjct: 129 YPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSC-------- 180
Query: 247 XXXXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSF 306
+ + S R++ F + F + T+
Sbjct: 181 --------------EEKSVKNTSIRVADFGSATFDHEHHTTI------------------ 208
Query: 307 VGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL 355
V T Y PEV D W+ G ++E G T F N L
Sbjct: 209 VATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHL 257
>pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1EH4|B Chain B, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Mgatp
Length = 298
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 26/39 (66%)
Query: 186 KRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLV 224
++FS+ + A ++L ++ +H ++YRD+KP+N L+
Sbjct: 101 RKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLI 139
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 56/120 (46%), Gaps = 15/120 (12%)
Query: 134 HRAEM-EKKILKMLDHPF--LPTLYAEFEASNFSCIVMEFCSGGDLHS-LRHKQ----PH 185
HRA M E KIL + H + L A + +++EFC G+L + LR K+ P+
Sbjct: 76 HRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPY 135
Query: 186 KR-------FSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
K +L Y+ +V +E+L I+RDL N+L+ + + DF L+
Sbjct: 136 KPEDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLA 195
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 48/115 (41%), Gaps = 15/115 (13%)
Query: 139 EKKILKML-DHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQ-------------- 183
E +++KM+ H + L +++E+ S G+L +
Sbjct: 124 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHN 183
Query: 184 PHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
P ++ S A +V +EYL I+RDL NVLV D + ++DF L+
Sbjct: 184 PEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 238
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 48/115 (41%), Gaps = 15/115 (13%)
Query: 139 EKKILKML-DHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQ-------------- 183
E +++KM+ H + L +++E+ S G+L +
Sbjct: 75 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHN 134
Query: 184 PHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
P ++ S A +V +EYL I+RDL NVLV D + ++DF L+
Sbjct: 135 PEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 189
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 48/115 (41%), Gaps = 15/115 (13%)
Query: 139 EKKILKML-DHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQ-------------- 183
E +++KM+ H + L +++E+ S G+L +
Sbjct: 68 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHN 127
Query: 184 PHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
P ++ S A +V +EYL I+RDL NVLV D + ++DF L+
Sbjct: 128 PEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 182
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 48/115 (41%), Gaps = 15/115 (13%)
Query: 139 EKKILKML-DHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQ-------------- 183
E +++KM+ H + L +++E+ S G+L +
Sbjct: 72 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHN 131
Query: 184 PHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
P ++ S A +V +EYL I+RDL NVLV D + ++DF L+
Sbjct: 132 PEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 186
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 48/115 (41%), Gaps = 15/115 (13%)
Query: 139 EKKILKML-DHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQ-------------- 183
E +++KM+ H + L +++E+ S G+L +
Sbjct: 83 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHN 142
Query: 184 PHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
P ++ S A +V +EYL I+RDL NVLV D + ++DF L+
Sbjct: 143 PEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 197
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 56/122 (45%), Gaps = 17/122 (13%)
Query: 134 HRAEM-EKKILKMLDHPF--LPTLYAEFEASNFSCIVMEFCSGGDLHS-LRHKQ----PH 185
HRA M E KIL + H + L A + +++EFC G+L + LR K+ P+
Sbjct: 65 HRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPY 124
Query: 186 KR---------FSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFD 236
K +L Y+ +V +E+L I+RDL N+L+ + + DF
Sbjct: 125 KVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFG 184
Query: 237 LS 238
L+
Sbjct: 185 LA 186
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 48/115 (41%), Gaps = 15/115 (13%)
Query: 139 EKKILKML-DHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQ-------------- 183
E +++KM+ H + L +++E+ S G+L +
Sbjct: 83 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHN 142
Query: 184 PHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
P ++ S A +V +EYL I+RDL NVLV D + ++DF L+
Sbjct: 143 PEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 197
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 48/115 (41%), Gaps = 15/115 (13%)
Query: 139 EKKILKML-DHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQ-------------- 183
E +++KM+ H + L +++E+ S G+L +
Sbjct: 76 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHN 135
Query: 184 PHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
P ++ S A +V +EYL I+RDL NVLV D + ++DF L+
Sbjct: 136 PEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 190
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 26/43 (60%)
Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ ++ + YL +++RDL NVLV++ H+ ++DF L+
Sbjct: 132 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 174
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 67/325 (20%), Positives = 103/325 (31%), Gaps = 95/325 (29%)
Query: 136 AEMEKKILKML-----DHPFLPTLYAE-FEASNFSCIVMEFCSGGDLHSLRHK--QPHKR 187
A +E +LK + ++ FL L ++ F CI E L+ QP
Sbjct: 95 ARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQP--- 151
Query: 188 FSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVL-VRSDGHIMLSDFDLSLCSNAIXX 246
+ L R A ++ AL +LH + + DLKPEN+L V S+ + ++
Sbjct: 152 YPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSC-------- 203
Query: 247 XXXXXXXXXXXXXRSQTYTRQYSTRLSRFLNRFFGSKKIQTLTPNRLFVAEPVAARSCSF 306
+ + S R++ F + F + T+
Sbjct: 204 --------------EEKSVKNTSIRVADFGSATFDHEHHTTI------------------ 231
Query: 307 VGTHEYVSPEVASGGSHGNAVDWWAFGIFIYEMIYGRTPFAAPSNETTL----------- 355
V T Y PEV D W+ G ++E G T F N L
Sbjct: 232 VATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIP 291
Query: 356 ----------RNIVKKPLTFPTQS------------------PSSMSEYHARDLISGLLN 387
+ K L + S S+ DL+ +L
Sbjct: 292 SHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLE 351
Query: 388 KDPCNRLGSKRGAADVKTHPFFKGL 412
DP R+ A+ HPFF GL
Sbjct: 352 FDPAQRI----TLAEALLHPFFAGL 372
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 56/122 (45%), Gaps = 17/122 (13%)
Query: 134 HRAEM-EKKILKMLDHPF--LPTLYAEFEASNFSCIVMEFCSGGDLHS-LRHKQ----PH 185
HRA M E KIL + H + L A + +++EFC G+L + LR K+ P+
Sbjct: 111 HRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPY 170
Query: 186 KR---------FSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFD 236
K +L Y+ +V +E+L I+RDL N+L+ + + DF
Sbjct: 171 KVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFG 230
Query: 237 LS 238
L+
Sbjct: 231 LA 232
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 26/43 (60%)
Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ ++ + YL +++RDL NVLV++ H+ ++DF L+
Sbjct: 125 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 167
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 56/122 (45%), Gaps = 17/122 (13%)
Query: 134 HRAEM-EKKILKMLDHPF--LPTLYAEFEASNFSCIVMEFCSGGDLHS-LRHKQ----PH 185
HRA M E KIL + H + L A + +++EFC G+L + LR K+ P+
Sbjct: 74 HRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPY 133
Query: 186 KR---------FSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFD 236
K +L Y+ +V +E+L I+RDL N+L+ + + DF
Sbjct: 134 KVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFG 193
Query: 237 LS 238
L+
Sbjct: 194 LA 195
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 26/43 (60%)
Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ ++ + YL +++RDL NVLV++ H+ ++DF L+
Sbjct: 128 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 170
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 26/43 (60%)
Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ ++ + YL +++RDL NVLV++ H+ ++DF L+
Sbjct: 122 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 164
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 26/43 (60%)
Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ ++ + YL +++RDL NVLV++ H+ ++DF L+
Sbjct: 126 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 168
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 26/43 (60%)
Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ ++ + YL +++RDL NVLV++ H+ ++DF L+
Sbjct: 129 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 171
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 26/43 (60%)
Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ ++ + YL +++RDL NVLV++ H+ ++DF L+
Sbjct: 129 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 171
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 26/43 (60%)
Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ ++ + YL +++RDL NVLV++ H+ ++DF L+
Sbjct: 125 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 167
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 26/43 (60%)
Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ ++ + YL +++RDL NVLV++ H+ ++DF L+
Sbjct: 124 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 166
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 26/43 (60%)
Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ ++ + YL +++RDL NVLV++ H+ ++DF L+
Sbjct: 147 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 189
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 26/43 (60%)
Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ ++ + YL +++RDL NVLV++ H+ ++DF L+
Sbjct: 125 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 167
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 48/115 (41%), Gaps = 15/115 (13%)
Query: 139 EKKILKML-DHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQ-------------- 183
E +++KM+ H + L +++E+ S G+L +
Sbjct: 83 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHN 142
Query: 184 PHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
P ++ S A +V +EYL I+RDL NVLV D + ++DF L+
Sbjct: 143 PEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 197
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 26/43 (60%)
Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ ++ + YL +++RDL NVLV++ H+ ++DF L+
Sbjct: 129 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 171
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 14/87 (16%)
Query: 166 IVMEFCSGGDLHSLRHKQ--------------PHKRFSLTSARFYAAEVLVALEYLHMLG 211
+++E+ S G+L + P ++ S A +V +EYL
Sbjct: 111 VIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK 170
Query: 212 IIYRDLKPENVLVRSDGHIMLSDFDLS 238
I+RDL NVLV D + ++DF L+
Sbjct: 171 CIHRDLAARNVLVTEDNVMKIADFGLA 197
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 26/43 (60%)
Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ ++ + YL +++RDL NVLV++ H+ ++DF L+
Sbjct: 156 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 198
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 56/122 (45%), Gaps = 17/122 (13%)
Query: 134 HRAEM-EKKILKMLDHPF--LPTLYAEFEASNFSCIVMEFCSGGDLHS-LRHKQ----PH 185
HRA M E KIL + H + L A + +++EFC G+L + LR K+ P+
Sbjct: 74 HRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPY 133
Query: 186 KR---------FSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFD 236
K +L Y+ +V +E+L I+RDL N+L+ + + DF
Sbjct: 134 KVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFG 193
Query: 237 LS 238
L+
Sbjct: 194 LA 195
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 26/43 (60%)
Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ ++ + YL +++RDL NVLV++ H+ ++DF L+
Sbjct: 122 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 164
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 26/43 (60%)
Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ ++ + YL +++RDL NVLV++ H+ ++DF L+
Sbjct: 124 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 166
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 26/43 (60%)
Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ ++ + YL +++RDL NVLV++ H+ ++DF L+
Sbjct: 122 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 164
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 56/122 (45%), Gaps = 17/122 (13%)
Query: 134 HRAEM-EKKILKMLDHPF--LPTLYAEFEASNFSCIVMEFCSGGDLHS-LRHKQ----PH 185
HRA M E KIL + H + L A + +++EFC G+L + LR K+ P+
Sbjct: 74 HRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPY 133
Query: 186 KR---------FSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFD 236
K +L Y+ +V +E+L I+RDL N+L+ + + DF
Sbjct: 134 KVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFG 193
Query: 237 LS 238
L+
Sbjct: 194 LA 195
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 26/43 (60%)
Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ ++ + YL +++RDL NVLV++ H+ ++DF L+
Sbjct: 123 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 165
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 26/43 (60%)
Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ ++ + YL +++RDL NVLV++ H+ ++DF L+
Sbjct: 125 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 167
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 26/43 (60%)
Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ ++ + YL +++RDL NVLV++ H+ ++DF L+
Sbjct: 122 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 164
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 26/43 (60%)
Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ ++ + YL +++RDL NVLV++ H+ ++DF L+
Sbjct: 122 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 164
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 24/32 (75%)
Query: 193 ARFYAAEVLVALEYLHMLGIIYRDLKPENVLV 224
+R + +V+ A+++ H G+++RD+K EN+L+
Sbjct: 141 SRCFFGQVVAAIQHCHSRGVVHRDIKDENILI 172
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Query: 305 SFVGTHEYVSPE-VASGGSHGNAVDWWAFGIFIYEMIYGRTPF 346
F GT Y PE ++ H W+ GI +Y+M+ G PF
Sbjct: 197 DFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPF 239
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 26/43 (60%)
Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ ++ + YL +++RDL NVLV++ H+ ++DF L+
Sbjct: 123 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 165
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 26/43 (60%)
Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ ++ + YL +++RDL NVLV++ H+ ++DF L+
Sbjct: 116 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 158
>pdb|3OP5|A Chain A, Human Vaccinia-Related Kinase 1
pdb|3OP5|B Chain B, Human Vaccinia-Related Kinase 1
pdb|3OP5|C Chain C, Human Vaccinia-Related Kinase 1
pdb|3OP5|D Chain D, Human Vaccinia-Related Kinase 1
Length = 364
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 82/201 (40%), Gaps = 27/201 (13%)
Query: 52 SLKPHRSSDFAYSAIRS--ATFGRKTGLTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDR 109
S K H + FA I + A K GL IG G G +YL +N+ +
Sbjct: 14 SAKRHLAEQFAVGEIITDMAAAAWKVGLP---------IGQGGFGCIYLADMNSS--ESV 62
Query: 110 GHE-PCCLYAMXXXXXXXXXXXXXXHRAEMEKKILKM-----LDHPFLPTLYA----EFE 159
G + PC + RA ++I K L + +P + +
Sbjct: 63 GSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGLHDKN 122
Query: 160 ASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKP 219
++ ++M+ G DL + ++ KRFS + + +L LEY+H ++ D+K
Sbjct: 123 GKSYRFMIMDRF-GSDLQKI-YEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKA 180
Query: 220 ENVLV--RSDGHIMLSDFDLS 238
N+L+ ++ + L D+ L+
Sbjct: 181 SNLLLNYKNPDQVYLVDYGLA 201
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 26/43 (60%)
Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ ++ + YL +++RDL NVLV++ H+ ++DF L+
Sbjct: 119 WCVQIAEGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 161
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 28/146 (19%), Positives = 57/146 (39%), Gaps = 11/146 (7%)
Query: 81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEK 140
+F +IG+G+ G+V+ C R D C+YA+ +
Sbjct: 8 EFHELEKIGSGEFGSVFKCV----KRLD-----GCIYAIKRSKKPLAGSVDEQNALREVY 58
Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSL--RHKQPHKRFSLTSARFYAA 198
+ H + ++ + + I E+C+GG L + + F +
Sbjct: 59 AHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLL 118
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLV 224
+V L Y+H + +++ D+KP N+ +
Sbjct: 119 QVGRGLRYIHSMSLVHMDIKPSNIFI 144
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 28/146 (19%), Positives = 57/146 (39%), Gaps = 11/146 (7%)
Query: 81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEK 140
+F +IG+G+ G+V+ C R D C+YA+ +
Sbjct: 12 EFHELEKIGSGEFGSVFKCV----KRLD-----GCIYAIKRSKKPLAGSVDEQNALREVY 62
Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSL--RHKQPHKRFSLTSARFYAA 198
+ H + ++ + + I E+C+GG L + + F +
Sbjct: 63 AHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLL 122
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLV 224
+V L Y+H + +++ D+KP N+ +
Sbjct: 123 QVGRGLRYIHSMSLVHMDIKPSNIFI 148
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 55/122 (45%), Gaps = 17/122 (13%)
Query: 134 HRAEM-EKKILKMLDHPF--LPTLYAEFEASNFSCIVMEFCSGGDLHS-LRHKQ----PH 185
HRA M E KIL + H + L A + ++ EFC G+L + LR K+ P+
Sbjct: 65 HRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPY 124
Query: 186 KR---------FSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFD 236
K +L Y+ +V +E+L I+RDL N+L+ + + DF
Sbjct: 125 KVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFG 184
Query: 237 LS 238
L+
Sbjct: 185 LA 186
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 55/122 (45%), Gaps = 17/122 (13%)
Query: 134 HRAEM-EKKILKMLDHPF--LPTLYAEFEASNFSCIVMEFCSGGDLHS-LRHKQ----PH 185
HRA M E KIL + H + L A + ++ EFC G+L + LR K+ P+
Sbjct: 65 HRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPY 124
Query: 186 KR---------FSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFD 236
K +L Y+ +V +E+L I+RDL N+L+ + + DF
Sbjct: 125 KVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFG 184
Query: 237 LS 238
L+
Sbjct: 185 LA 186
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 28/146 (19%), Positives = 57/146 (39%), Gaps = 11/146 (7%)
Query: 81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEK 140
+F +IG+G+ G+V+ C R D C+YA+ +
Sbjct: 10 EFHELEKIGSGEFGSVFKCV----KRLD-----GCIYAIKRSKKPLAGSVDEQNALREVY 60
Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSL--RHKQPHKRFSLTSARFYAA 198
+ H + ++ + + I E+C+GG L + + F +
Sbjct: 61 AHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLL 120
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLV 224
+V L Y+H + +++ D+KP N+ +
Sbjct: 121 QVGRGLRYIHSMSLVHMDIKPSNIFI 146
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 55/122 (45%), Gaps = 17/122 (13%)
Query: 134 HRAEM-EKKILKMLDHPF--LPTLYAEFEASNFSCIVMEFCSGGDLHS-LRHKQ----PH 185
HRA M E KIL + H + L A + ++ EFC G+L + LR K+ P+
Sbjct: 65 HRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPY 124
Query: 186 KR---------FSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFD 236
K +L Y+ +V +E+L I+RDL N+L+ + + DF
Sbjct: 125 KVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFG 184
Query: 237 LS 238
L+
Sbjct: 185 LA 186
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 33.1 bits (74), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 53/121 (43%), Gaps = 15/121 (12%)
Query: 139 EKKILKML-DHPFLPTLYAEFEASNFSCIVMEFCSGGDLHS-LRHKQP------------ 184
E +++KM+ H + TL +++E+ S G+L LR ++P
Sbjct: 90 EMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRV 149
Query: 185 -HKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNA 243
++ + ++ +EYL I+RDL NVLV + + ++DF L+ N
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINN 209
Query: 244 I 244
I
Sbjct: 210 I 210
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 28/146 (19%), Positives = 57/146 (39%), Gaps = 11/146 (7%)
Query: 81 DFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHRAEMEK 140
+F +IG+G+ G+V+ C R D C+YA+ +
Sbjct: 10 EFHELEKIGSGEFGSVFKCV----KRLD-----GCIYAIKRSKKPLAGSVDEQNALREVY 60
Query: 141 KILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSL--RHKQPHKRFSLTSARFYAA 198
+ H + ++ + + I E+C+GG L + + F +
Sbjct: 61 AHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLL 120
Query: 199 EVLVALEYLHMLGIIYRDLKPENVLV 224
+V L Y+H + +++ D+KP N+ +
Sbjct: 121 QVGRGLRYIHSMSLVHMDIKPSNIFI 146
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 32.7 bits (73), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 69/179 (38%), Gaps = 28/179 (15%)
Query: 77 LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHR- 135
L + D IG G+ G V L + ++D + M HR
Sbjct: 22 LDWNDIKFQDVIGEGNFGQV----LKARIKKDGLRMDAAIKRMKEYASKDD------HRD 71
Query: 136 --AEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHK----QPHKRFS 189
E+E + K+ HP + L E + + +E+ G+L K + F+
Sbjct: 72 FAGELEV-LCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFA 130
Query: 190 LTSAR----------FYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ ++ +AA+V ++YL I+RDL N+LV + ++DF LS
Sbjct: 131 IANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLS 189
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 32.7 bits (73), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 69/179 (38%), Gaps = 28/179 (15%)
Query: 77 LTFRDFDLHRRIGAGDIGTVYLCSLNNKYRQDRGHEPCCLYAMXXXXXXXXXXXXXXHR- 135
L + D IG G+ G V L + ++D + M HR
Sbjct: 12 LDWNDIKFQDVIGEGNFGQV----LKARIKKDGLRMDAAIKRMKEYASKDD------HRD 61
Query: 136 --AEMEKKILKMLDHPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHK----QPHKRFS 189
E+E + K+ HP + L E + + +E+ G+L K + F+
Sbjct: 62 FAGELEV-LCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFA 120
Query: 190 LTSAR----------FYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
+ ++ +AA+V ++YL I+RDL N+LV + ++DF LS
Sbjct: 121 IANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLS 179
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 32.7 bits (73), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 45/95 (47%), Gaps = 6/95 (6%)
Query: 148 HPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVA---- 203
HP L +L + N ++ ++ G+L RH +++ + E+ +
Sbjct: 94 HPHLVSLIGFCDERNEMILIYKYMENGNLK--RHLYGSDLPTMSMSWEQRLEICIGAARG 151
Query: 204 LEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
L YLH II+RD+K N+L+ + ++DF +S
Sbjct: 152 LHYLHTRAIIHRDVKSINILLDENFVPKITDFGIS 186
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 32.7 bits (73), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 45/95 (47%), Gaps = 6/95 (6%)
Query: 148 HPFLPTLYAEFEASNFSCIVMEFCSGGDLHSLRHKQPHKRFSLTSARFYAAEVLVA---- 203
HP L +L + N ++ ++ G+L RH +++ + E+ +
Sbjct: 94 HPHLVSLIGFCDERNEMILIYKYMENGNLK--RHLYGSDLPTMSMSWEQRLEICIGAARG 151
Query: 204 LEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLS 238
L YLH II+RD+K N+L+ + ++DF +S
Sbjct: 152 LHYLHTRAIIHRDVKSINILLDENFVPKITDFGIS 186
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 32.3 bits (72), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 24/40 (60%)
Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDF 235
+ ++ + YL +++RDL NVLV++ H+ ++DF
Sbjct: 124 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDF 163
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 32.3 bits (72), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 24/40 (60%)
Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDF 235
+ ++ + YL +++RDL NVLV++ H+ ++DF
Sbjct: 129 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDF 168
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 32.3 bits (72), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 24/40 (60%)
Query: 196 YAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDF 235
+ ++ + YL +++RDL NVLV++ H+ ++DF
Sbjct: 124 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDF 163
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.137 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,547,125
Number of Sequences: 62578
Number of extensions: 427596
Number of successful extensions: 3294
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 992
Number of HSP's successfully gapped in prelim test: 88
Number of HSP's that attempted gapping in prelim test: 676
Number of HSP's gapped (non-prelim): 2050
length of query: 451
length of database: 14,973,337
effective HSP length: 102
effective length of query: 349
effective length of database: 8,590,381
effective search space: 2998042969
effective search space used: 2998042969
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (25.0 bits)