Query 013017
Match_columns 451
No_of_seqs 240 out of 1219
Neff 5.1
Searched_HMMs 46136
Date Fri Mar 29 08:41:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013017.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/013017hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1605 TFIIF-interacting CTD 100.0 1.3E-47 2.7E-52 376.5 14.0 198 243-441 62-262 (262)
2 TIGR02251 HIF-SF_euk Dullard-l 100.0 6.6E-40 1.4E-44 300.6 17.6 161 270-430 1-162 (162)
3 PF03031 NIF: NLI interacting 100.0 4.6E-38 1E-42 283.6 16.4 158 271-432 1-159 (159)
4 TIGR02245 HAD_IIID1 HAD-superf 100.0 4.2E-36 9.1E-41 284.5 15.2 158 267-440 18-193 (195)
5 TIGR02250 FCP1_euk FCP1-like p 100.0 7.5E-31 1.6E-35 240.3 13.6 138 267-407 3-154 (156)
6 KOG2832 TFIIF-interacting CTD 100.0 9.2E-31 2E-35 264.0 9.0 158 265-438 184-343 (393)
7 COG5190 FCP1 TFIIF-interacting 99.9 2E-28 4.4E-33 251.7 9.2 178 263-441 205-384 (390)
8 smart00577 CPDc catalytic doma 99.9 7.1E-27 1.5E-31 210.6 15.1 145 269-413 1-148 (148)
9 KOG0323 TFIIF-interacting CTD 99.8 1.4E-18 3E-23 188.0 11.0 137 268-407 144-297 (635)
10 TIGR01685 MDP-1 magnesium-depe 98.7 3E-08 6.4E-13 93.1 8.6 137 271-407 3-157 (174)
11 TIGR01681 HAD-SF-IIIC HAD-supe 98.6 2E-08 4.3E-13 88.8 3.8 111 271-393 1-121 (128)
12 PLN03243 haloacid dehalogenase 98.6 1.2E-08 2.7E-13 100.6 2.1 98 309-407 108-209 (260)
13 PLN02770 haloacid dehalogenase 98.6 2.2E-08 4.8E-13 97.3 3.0 97 309-406 107-207 (248)
14 PRK14988 GMP/IMP nucleotidase; 98.6 2.3E-08 5E-13 96.0 3.0 93 309-402 92-188 (224)
15 PRK13288 pyrophosphatase PpaX; 98.5 1.6E-08 3.4E-13 95.1 0.5 95 309-404 81-179 (214)
16 COG0637 Predicted phosphatase/ 98.5 2.2E-08 4.7E-13 96.3 -0.1 99 309-408 85-187 (221)
17 TIGR01993 Pyr-5-nucltdase pyri 98.5 3.5E-08 7.6E-13 90.7 1.0 92 309-403 83-181 (184)
18 PRK10725 fructose-1-P/6-phosph 98.5 2.8E-08 6E-13 91.0 -0.2 94 309-404 87-183 (188)
19 PRK11587 putative phosphatase; 98.4 1.3E-07 2.8E-12 89.7 3.7 97 309-407 82-182 (218)
20 PLN02575 haloacid dehalogenase 98.4 7.2E-08 1.6E-12 100.5 1.7 97 309-406 215-315 (381)
21 PRK13225 phosphoglycolate phos 98.4 1.1E-07 2.4E-12 94.5 2.0 95 309-404 141-236 (273)
22 cd01427 HAD_like Haloacid deha 98.4 4.1E-07 8.9E-12 76.2 4.6 108 272-395 1-128 (139)
23 TIGR01662 HAD-SF-IIIA HAD-supe 98.4 4.5E-07 9.8E-12 79.1 4.7 114 271-402 1-126 (132)
24 PRK13226 phosphoglycolate phos 98.3 8.3E-08 1.8E-12 92.0 -0.1 95 309-404 94-192 (229)
25 TIGR00213 GmhB_yaeD D,D-heptos 98.3 1.5E-06 3.2E-11 80.3 6.6 115 271-403 2-146 (176)
26 TIGR03351 PhnX-like phosphonat 98.3 2.2E-07 4.7E-12 87.5 1.0 95 309-403 86-186 (220)
27 TIGR01684 viral_ppase viral ph 98.3 2.6E-06 5.7E-11 86.1 8.2 75 267-363 123-199 (301)
28 PRK10563 6-phosphogluconate ph 98.2 2.5E-07 5.4E-12 87.3 0.5 95 309-406 87-185 (221)
29 PRK13223 phosphoglycolate phos 98.2 9E-07 1.9E-11 87.6 4.1 93 309-402 100-196 (272)
30 TIGR00338 serB phosphoserine p 98.2 2.8E-06 6.1E-11 79.9 7.0 98 309-408 84-195 (219)
31 PHA03398 viral phosphatase sup 98.2 5.1E-06 1.1E-10 84.1 9.2 123 267-412 125-283 (303)
32 TIGR01656 Histidinol-ppas hist 98.2 1.2E-06 2.7E-11 78.6 4.4 116 271-402 1-140 (147)
33 COG4996 Predicted phosphatase 98.2 6.1E-06 1.3E-10 74.8 8.6 141 272-415 2-154 (164)
34 COG5190 FCP1 TFIIF-interacting 98.2 8.1E-07 1.7E-11 92.7 3.4 136 267-405 23-172 (390)
35 PLN02940 riboflavin kinase 98.2 4E-07 8.6E-12 94.7 0.8 95 309-404 92-191 (382)
36 PHA02597 30.2 hypothetical pro 98.2 2.6E-07 5.6E-12 85.8 -0.9 96 309-406 73-173 (197)
37 TIGR01261 hisB_Nterm histidino 98.1 5.1E-06 1.1E-10 76.7 7.1 123 271-408 2-148 (161)
38 PRK08942 D,D-heptose 1,7-bisph 98.1 6.3E-06 1.4E-10 76.2 7.5 116 270-402 3-142 (181)
39 TIGR01549 HAD-SF-IA-v1 haloaci 98.0 1.6E-06 3.5E-11 77.0 1.4 81 309-393 63-147 (154)
40 TIGR01686 FkbH FkbH-like domai 98.0 8.8E-06 1.9E-10 82.4 6.5 107 270-393 3-116 (320)
41 PF12689 Acid_PPase: Acid Phos 98.0 1.6E-05 3.5E-10 74.5 7.6 118 270-393 3-137 (169)
42 TIGR01672 AphA HAD superfamily 98.0 6E-06 1.3E-10 81.1 4.7 132 267-403 60-207 (237)
43 PHA02530 pseT polynucleotide k 98.0 8.6E-06 1.9E-10 80.6 4.9 128 268-406 156-295 (300)
44 PLN02919 haloacid dehalogenase 97.9 3.9E-06 8.5E-11 97.6 2.5 96 311-406 162-261 (1057)
45 PRK06698 bifunctional 5'-methy 97.9 2.5E-06 5.5E-11 90.2 -0.1 92 309-403 329-423 (459)
46 TIGR01664 DNA-3'-Pase DNA 3'-p 97.9 3.7E-05 8E-10 71.2 7.3 108 269-390 12-137 (166)
47 PF13419 HAD_2: Haloacid dehal 97.8 1.7E-05 3.7E-10 69.8 4.5 94 308-402 75-172 (176)
48 PRK06769 hypothetical protein; 97.8 2.5E-05 5.4E-10 72.4 5.3 117 270-404 4-134 (173)
49 KOG3109 Haloacid dehalogenase- 97.8 1.7E-05 3.7E-10 77.2 3.2 86 309-396 99-194 (244)
50 TIGR02253 CTE7 HAD superfamily 97.7 3.2E-05 7E-10 72.6 4.6 94 309-403 93-191 (221)
51 TIGR01509 HAD-SF-IA-v3 haloaci 97.7 3.9E-05 8.4E-10 69.2 4.9 92 309-402 84-179 (183)
52 COG0546 Gph Predicted phosphat 97.7 2.5E-05 5.3E-10 74.7 3.6 93 309-402 88-184 (220)
53 TIGR01449 PGP_bact 2-phosphogl 97.7 4.7E-05 1E-09 70.9 4.6 97 309-406 84-184 (213)
54 TIGR01454 AHBA_synth_RP 3-amin 97.7 5.9E-05 1.3E-09 70.5 5.2 96 309-405 74-173 (205)
55 TIGR01489 DKMTPPase-SF 2,3-dik 97.6 4.8E-05 1E-09 69.1 4.0 86 309-395 71-177 (188)
56 TIGR01428 HAD_type_II 2-haloal 97.6 6.8E-05 1.5E-09 69.6 4.7 94 309-403 91-188 (198)
57 PRK05446 imidazole glycerol-ph 97.6 0.00018 4E-09 74.7 8.2 121 269-404 1-145 (354)
58 TIGR02254 YjjG/YfnB HAD superf 97.6 6.2E-05 1.3E-09 70.4 4.3 94 309-403 96-194 (224)
59 PF05152 DUF705: Protein of un 97.6 0.00039 8.4E-09 70.1 9.8 72 268-361 120-193 (297)
60 TIGR01668 YqeG_hyp_ppase HAD s 97.6 0.0001 2.2E-09 68.1 5.4 108 268-404 23-133 (170)
61 PRK13582 thrH phosphoserine ph 97.6 2E-05 4.4E-10 73.2 0.5 94 309-403 67-167 (205)
62 PRK10826 2-deoxyglucose-6-phos 97.5 0.0001 2.2E-09 69.9 5.0 100 309-409 91-194 (222)
63 PRK11009 aphA acid phosphatase 97.5 0.00022 4.8E-09 70.2 7.5 130 267-402 60-206 (237)
64 PRK09456 ?-D-glucose-1-phospha 97.5 9.6E-05 2.1E-09 69.1 4.0 100 309-408 83-186 (199)
65 TIGR02009 PGMB-YQAB-SF beta-ph 97.5 8.3E-05 1.8E-09 67.6 3.2 92 309-403 87-182 (185)
66 TIGR01670 YrbI-phosphatas 3-de 97.5 0.00016 3.4E-09 65.9 4.9 111 271-402 2-114 (154)
67 PRK09449 dUMP phosphatase; Pro 97.4 0.00014 3.1E-09 68.6 4.6 93 309-402 94-191 (224)
68 TIGR01422 phosphonatase phosph 97.4 0.00019 4.2E-09 69.4 5.0 97 309-406 98-200 (253)
69 PLN02954 phosphoserine phospha 97.4 9.1E-05 2E-09 69.9 2.5 92 309-402 83-191 (224)
70 TIGR02137 HSK-PSP phosphoserin 97.3 0.00013 2.8E-09 69.7 2.4 83 309-395 67-159 (203)
71 TIGR01663 PNK-3'Pase polynucle 97.2 0.00071 1.5E-08 73.7 7.3 108 269-390 167-294 (526)
72 PRK13222 phosphoglycolate phos 97.2 0.00047 1E-08 64.7 4.9 93 309-402 92-188 (226)
73 PRK13478 phosphonoacetaldehyde 97.2 0.00065 1.4E-08 66.6 5.8 98 309-406 100-202 (267)
74 TIGR02247 HAD-1A3-hyp Epoxide 97.1 0.00025 5.4E-09 66.4 2.2 98 309-407 93-196 (211)
75 TIGR01990 bPGM beta-phosphoglu 97.1 0.00044 9.5E-09 62.9 3.6 91 310-403 87-181 (185)
76 PLN02779 haloacid dehalogenase 97.0 0.00079 1.7E-08 67.4 5.2 97 309-406 143-245 (286)
77 PRK11133 serB phosphoserine ph 97.0 0.0013 2.8E-08 67.5 6.8 95 309-404 180-288 (322)
78 COG1011 Predicted hydrolase (H 97.0 0.0011 2.5E-08 62.1 5.8 84 309-393 98-184 (229)
79 PRK08238 hypothetical protein; 97.0 0.0022 4.8E-08 69.1 8.7 90 309-404 71-165 (479)
80 TIGR01491 HAD-SF-IB-PSPlk HAD- 97.0 0.0014 3E-08 60.3 6.1 94 309-403 79-186 (201)
81 TIGR02252 DREG-2 REG-2-like, H 97.0 0.00074 1.6E-08 62.8 4.4 90 310-401 105-199 (203)
82 TIGR01548 HAD-SF-IA-hyp1 haloa 97.0 0.0015 3.3E-08 60.8 6.4 80 312-393 108-191 (197)
83 TIGR01459 HAD-SF-IIA-hyp4 HAD- 97.0 0.0012 2.7E-08 63.9 5.8 95 270-390 8-105 (242)
84 PRK09484 3-deoxy-D-manno-octul 96.9 0.0017 3.7E-08 60.7 5.5 115 269-403 20-135 (183)
85 KOG2914 Predicted haloacid-hal 96.9 0.00025 5.5E-09 69.3 -0.0 95 309-404 91-193 (222)
86 TIGR01689 EcbF-BcbF capsule bi 96.9 0.0023 5E-08 57.4 6.1 73 271-360 2-87 (126)
87 PLN02811 hydrolase 96.8 0.0012 2.6E-08 62.8 4.4 97 309-406 77-183 (220)
88 TIGR01691 enolase-ppase 2,3-di 96.8 0.0013 2.8E-08 64.0 4.5 94 309-403 94-192 (220)
89 TIGR01533 lipo_e_P4 5'-nucleot 96.8 0.00095 2E-08 66.9 3.2 92 268-360 73-172 (266)
90 PRK09552 mtnX 2-hydroxy-3-keto 96.4 0.0096 2.1E-07 56.7 7.1 95 309-404 73-184 (219)
91 TIGR01493 HAD-SF-IA-v2 Haloaci 96.3 0.0012 2.7E-08 59.8 0.6 76 309-391 89-167 (175)
92 COG0560 SerB Phosphoserine pho 96.2 0.0048 1E-07 59.6 3.8 86 309-395 76-175 (212)
93 COG2179 Predicted hydrolase of 96.0 0.0086 1.9E-07 56.5 4.5 118 262-408 20-142 (175)
94 COG0561 Cof Predicted hydrolas 96.0 0.021 4.6E-07 55.5 7.5 58 270-350 3-61 (264)
95 PRK00192 mannosyl-3-phosphogly 95.9 0.024 5.1E-07 55.9 7.3 58 270-350 4-62 (273)
96 TIGR02726 phenyl_P_delta pheny 95.8 0.018 3.8E-07 54.0 5.6 115 269-404 6-122 (169)
97 PTZ00445 p36-lilke protein; Pr 95.7 0.015 3.3E-07 56.8 5.0 132 267-407 40-205 (219)
98 PF08282 Hydrolase_3: haloacid 95.6 0.029 6.2E-07 52.2 6.4 54 273-349 1-55 (254)
99 PF08645 PNK3P: Polynucleotide 95.5 0.024 5.2E-07 52.3 5.2 103 271-391 1-129 (159)
100 COG0241 HisB Histidinol phosph 95.4 0.03 6.6E-07 53.3 5.8 126 270-409 5-154 (181)
101 PRK03669 mannosyl-3-phosphogly 95.4 0.048 1E-06 53.7 7.4 59 268-349 5-64 (271)
102 TIGR01487 SPP-like sucrose-pho 95.3 0.046 9.9E-07 51.6 6.7 57 271-350 2-59 (215)
103 PRK10513 sugar phosphate phosp 95.3 0.046 9.9E-07 53.2 6.9 58 270-350 3-61 (270)
104 PF13344 Hydrolase_6: Haloacid 95.2 0.032 6.9E-07 47.7 4.9 50 273-346 1-51 (101)
105 TIGR03333 salvage_mtnX 2-hydro 95.2 0.042 9.1E-07 52.2 6.1 94 308-401 68-177 (214)
106 PRK10530 pyridoxal phosphate ( 95.2 0.059 1.3E-06 52.2 7.2 58 270-350 3-61 (272)
107 PRK10748 flavin mononucleotide 95.2 0.014 3.1E-07 56.4 2.9 89 309-403 112-204 (238)
108 TIGR02461 osmo_MPG_phos mannos 95.0 0.056 1.2E-06 52.3 6.6 53 273-349 2-55 (225)
109 PRK01158 phosphoglycolate phos 95.0 0.08 1.7E-06 50.0 7.4 58 270-350 3-61 (230)
110 TIGR01544 HAD-SF-IE haloacid d 95.0 0.07 1.5E-06 54.0 7.2 104 309-413 120-248 (277)
111 PRK15126 thiamin pyrimidine py 94.8 0.077 1.7E-06 51.9 6.8 57 271-350 3-60 (272)
112 PRK10976 putative hydrolase; P 94.8 0.077 1.7E-06 51.6 6.8 57 271-350 3-60 (266)
113 TIGR00099 Cof-subfamily Cof su 94.8 0.076 1.6E-06 51.4 6.7 55 273-350 2-57 (256)
114 TIGR02463 MPGP_rel mannosyl-3- 94.7 0.084 1.8E-06 49.9 6.8 54 273-349 2-56 (221)
115 COG3882 FkbH Predicted enzyme 94.7 0.03 6.5E-07 60.4 4.1 129 267-409 219-357 (574)
116 PF09419 PGP_phosphatase: Mito 94.4 0.14 3.1E-06 48.2 7.4 97 265-391 36-147 (168)
117 smart00775 LNS2 LNS2 domain. T 94.2 0.11 2.4E-06 47.8 6.0 62 273-346 2-67 (157)
118 TIGR01488 HAD-SF-IB Haloacid D 93.9 0.13 2.9E-06 46.3 6.0 83 309-392 72-170 (177)
119 TIGR01482 SPP-subfamily Sucros 93.9 0.14 3.1E-06 48.0 6.4 54 273-349 1-55 (225)
120 TIGR01486 HAD-SF-IIB-MPGP mann 93.8 0.17 3.6E-06 49.3 6.9 54 273-349 2-56 (256)
121 PTZ00174 phosphomannomutase; P 93.5 0.18 3.9E-06 49.1 6.6 53 269-344 4-57 (247)
122 TIGR01484 HAD-SF-IIB HAD-super 93.3 0.17 3.7E-06 47.1 5.7 54 272-347 1-55 (204)
123 PRK10444 UMP phosphatase; Prov 92.9 0.15 3.2E-06 50.3 4.9 53 271-347 2-55 (248)
124 TIGR01456 CECR5 HAD-superfamil 92.9 0.18 3.9E-06 51.4 5.6 54 271-348 1-63 (321)
125 TIGR01490 HAD-SF-IB-hyp1 HAD-s 92.7 0.17 3.6E-06 46.9 4.7 84 310-394 87-185 (202)
126 PF06888 Put_Phosphatase: Puta 92.6 0.15 3.3E-06 50.4 4.5 51 309-360 70-123 (234)
127 PRK12702 mannosyl-3-phosphogly 92.6 0.33 7.1E-06 49.8 7.0 57 271-350 2-59 (302)
128 TIGR01452 PGP_euk phosphoglyco 92.3 0.18 3.9E-06 50.1 4.7 41 271-335 3-44 (279)
129 PLN02645 phosphoglycolate phos 92.2 0.19 4.2E-06 50.9 4.9 53 269-345 27-80 (311)
130 PF11019 DUF2608: Protein of u 92.2 0.19 4.1E-06 50.0 4.6 101 309-409 80-211 (252)
131 TIGR01458 HAD-SF-IIA-hyp3 HAD- 92.1 0.19 4.1E-06 49.6 4.6 58 271-348 2-63 (257)
132 PRK10187 trehalose-6-phosphate 91.9 0.36 7.8E-06 48.0 6.3 60 270-347 14-75 (266)
133 PLN02887 hydrolase family prot 91.6 0.41 8.9E-06 53.1 6.8 59 268-349 306-365 (580)
134 COG4502 5'(3')-deoxyribonucleo 91.5 0.43 9.3E-06 44.4 5.8 84 309-407 67-154 (180)
135 PLN02423 phosphomannomutase 91.2 0.48 1E-05 46.4 6.3 53 270-348 7-59 (245)
136 PRK14502 bifunctional mannosyl 90.8 0.79 1.7E-05 51.8 8.1 60 267-349 413-473 (694)
137 TIGR01457 HAD-SF-IIA-hyp2 HAD- 90.0 0.44 9.5E-06 46.7 4.8 55 271-349 2-60 (249)
138 TIGR02244 HAD-IG-Ncltidse HAD 89.5 0.72 1.6E-05 48.1 6.1 52 307-358 181-240 (343)
139 TIGR01485 SPP_plant-cyano sucr 89.0 0.73 1.6E-05 44.7 5.4 61 270-350 1-62 (249)
140 COG2503 Predicted secreted aci 88.7 0.36 7.9E-06 48.3 3.1 66 267-333 76-145 (274)
141 COG0647 NagD Predicted sugar p 88.7 0.58 1.3E-05 47.3 4.6 56 269-348 7-67 (269)
142 TIGR01675 plant-AP plant acid 87.5 1.3 2.8E-05 43.8 6.1 92 268-360 75-172 (229)
143 TIGR01511 ATPase-IB1_Cu copper 86.8 1.3 2.9E-05 48.6 6.4 85 309-403 404-489 (562)
144 TIGR01460 HAD-SF-IIA Haloacid 86.3 0.92 2E-05 44.0 4.3 51 273-347 1-56 (236)
145 COG4359 Uncharacterized conser 85.3 2.2 4.8E-05 41.4 6.2 41 309-349 72-113 (220)
146 PLN02151 trehalose-phosphatase 85.1 1.6 3.5E-05 45.7 5.7 60 267-344 95-154 (354)
147 PF00702 Hydrolase: haloacid d 85.0 1.1 2.5E-05 41.0 4.1 80 308-391 125-206 (215)
148 PLN03017 trehalose-phosphatase 84.0 1.9 4.2E-05 45.4 5.7 60 267-344 108-167 (366)
149 KOG3085 Predicted hydrolase (H 83.5 0.76 1.6E-05 45.7 2.4 81 309-392 113-197 (237)
150 PLN02580 trehalose-phosphatase 83.3 2.2 4.8E-05 45.3 5.8 61 267-345 116-176 (384)
151 TIGR00685 T6PP trehalose-phosp 82.7 1.2 2.6E-05 43.4 3.3 48 269-334 2-51 (244)
152 KOG3120 Predicted haloacid deh 82.3 0.57 1.2E-05 46.4 1.0 48 309-357 83-132 (256)
153 COG1877 OtsB Trehalose-6-phosp 81.1 3.2 6.9E-05 42.0 5.8 60 267-344 15-76 (266)
154 PF06941 NT5C: 5' nucleotidase 81.1 1.1 2.5E-05 41.8 2.5 80 309-404 72-159 (191)
155 PF03767 Acid_phosphat_B: HAD 81.1 0.21 4.6E-06 48.8 -2.5 74 268-347 70-156 (229)
156 TIGR01548 HAD-SF-IA-hyp1 haloa 81.0 0.69 1.5E-05 43.0 1.0 14 272-285 2-15 (197)
157 TIGR01525 ATPase-IB_hvy heavy 80.5 2.9 6.4E-05 45.8 5.8 78 309-395 383-462 (556)
158 COG3769 Predicted hydrolase (H 79.2 6.5 0.00014 39.3 7.0 58 270-351 7-65 (274)
159 TIGR02253 CTE7 HAD superfamily 78.6 1.2 2.5E-05 41.8 1.7 15 271-285 3-17 (221)
160 TIGR01422 phosphonatase phosph 78.4 1.2 2.6E-05 43.1 1.7 16 270-285 2-17 (253)
161 TIGR02009 PGMB-YQAB-SF beta-ph 78.0 1.1 2.3E-05 40.6 1.3 15 271-285 2-16 (185)
162 PRK11590 hypothetical protein; 77.8 1.3 2.7E-05 42.2 1.7 39 309-347 94-134 (211)
163 PRK13478 phosphonoacetaldehyde 77.8 1.3 2.8E-05 43.5 1.8 16 270-285 4-19 (267)
164 PRK10748 flavin mononucleotide 76.7 1.4 3.1E-05 42.6 1.7 16 270-285 10-25 (238)
165 PRK11590 hypothetical protein; 76.3 4.1 8.8E-05 38.7 4.7 17 269-285 5-21 (211)
166 TIGR02252 DREG-2 REG-2-like, H 76.2 1.3 2.8E-05 41.1 1.2 14 272-285 2-15 (203)
167 PRK14501 putative bifunctional 76.1 4.7 0.0001 45.7 5.9 62 267-346 489-552 (726)
168 TIGR01512 ATPase-IB2_Cd heavy 75.8 2.4 5.3E-05 46.3 3.4 79 308-395 360-440 (536)
169 PLN02779 haloacid dehalogenase 75.0 1.6 3.4E-05 43.8 1.6 18 268-285 38-55 (286)
170 TIGR02471 sucr_syn_bact_C sucr 74.3 4.2 9.2E-05 38.9 4.3 53 273-349 2-54 (236)
171 TIGR01990 bPGM beta-phosphoglu 73.6 1.4 3.1E-05 39.8 0.8 15 272-286 1-15 (185)
172 TIGR01680 Veg_Stor_Prot vegeta 73.5 4.7 0.0001 41.0 4.5 90 269-360 100-197 (275)
173 TIGR01545 YfhB_g-proteo haloac 73.3 7.8 0.00017 37.2 5.9 38 309-346 93-132 (210)
174 TIGR01454 AHBA_synth_RP 3-amin 73.2 1.4 2.9E-05 41.2 0.6 13 273-285 1-13 (205)
175 PRK10826 2-deoxyglucose-6-phos 72.1 2.2 4.8E-05 40.3 1.8 17 269-285 6-22 (222)
176 TIGR02254 YjjG/YfnB HAD superf 71.6 2 4.3E-05 40.0 1.3 15 271-285 2-16 (224)
177 TIGR01449 PGP_bact 2-phosphogl 71.5 1.6 3.4E-05 40.6 0.6 13 273-285 1-13 (213)
178 TIGR01428 HAD_type_II 2-haloal 70.6 2.2 4.7E-05 39.5 1.3 15 271-285 2-16 (198)
179 TIGR01491 HAD-SF-IB-PSPlk HAD- 70.5 2.5 5.5E-05 38.6 1.7 16 270-285 4-19 (201)
180 TIGR02247 HAD-1A3-hyp Epoxide 70.3 2.4 5.3E-05 39.6 1.6 15 271-285 3-17 (211)
181 TIGR01493 HAD-SF-IA-v2 Haloaci 70.2 2.1 4.6E-05 38.6 1.1 13 273-285 2-14 (175)
182 PF05116 S6PP: Sucrose-6F-phos 69.8 6.7 0.00015 38.5 4.6 54 270-347 2-57 (247)
183 PRK09449 dUMP phosphatase; Pro 69.7 2.4 5.2E-05 39.9 1.4 15 270-284 3-17 (224)
184 PRK13222 phosphoglycolate phos 68.8 2.7 5.8E-05 39.3 1.5 16 270-285 6-21 (226)
185 PF08235 LNS2: LNS2 (Lipin/Ned 66.8 15 0.00033 34.4 6.0 62 273-346 2-64 (157)
186 PF12710 HAD: haloacid dehalog 66.4 6.2 0.00013 35.7 3.3 47 311-357 86-138 (192)
187 TIGR01509 HAD-SF-IA-v3 haloaci 65.2 2.6 5.5E-05 37.8 0.6 15 272-286 1-15 (183)
188 PF13419 HAD_2: Haloacid dehal 64.5 3.1 6.8E-05 36.2 1.0 13 273-285 1-13 (176)
189 PLN02382 probable sucrose-phos 59.4 19 0.00042 38.3 6.0 17 268-284 7-23 (413)
190 PF02358 Trehalose_PPase: Treh 57.8 16 0.00035 35.2 4.7 49 274-340 1-51 (235)
191 PLN02205 alpha,alpha-trehalose 57.7 18 0.00038 42.4 5.7 59 268-346 594-654 (854)
192 PF08484 Methyltransf_14: C-me 52.5 43 0.00092 31.2 6.4 66 311-407 53-120 (160)
193 PRK09552 mtnX 2-hydroxy-3-keto 52.5 7.6 0.00016 36.9 1.5 16 270-285 3-18 (219)
194 PLN03063 alpha,alpha-trehalose 52.4 26 0.00056 40.6 5.9 64 267-345 504-569 (797)
195 COG1011 Predicted hydrolase (H 51.2 9.2 0.0002 35.7 1.8 16 270-285 4-19 (229)
196 PF05822 UMPH-1: Pyrimidine 5' 50.6 19 0.00041 36.1 4.0 102 308-410 88-213 (246)
197 TIGR01545 YfhB_g-proteo haloac 49.7 9.1 0.0002 36.7 1.5 16 270-285 5-20 (210)
198 PRK09456 ?-D-glucose-1-phospha 49.5 9.2 0.0002 35.6 1.5 14 272-285 2-15 (199)
199 KOG4549 Magnesium-dependent ph 47.1 1.1E+02 0.0024 28.2 7.9 121 269-391 4-133 (144)
200 PRK10671 copA copper exporting 44.7 21 0.00046 41.2 3.7 85 310-403 650-735 (834)
201 PLN03064 alpha,alpha-trehalose 42.3 46 0.00099 39.5 5.9 71 267-346 588-660 (934)
202 PLN02177 glycerol-3-phosphate 39.9 23 0.0005 38.9 2.9 23 327-349 124-147 (497)
203 TIGR01488 HAD-SF-IB Haloacid D 39.6 14 0.0003 33.1 1.0 13 273-285 2-14 (177)
204 PF12710 HAD: haloacid dehalog 39.5 16 0.00035 33.0 1.4 13 273-285 1-13 (192)
205 TIGR01490 HAD-SF-IB-hyp1 HAD-s 38.5 16 0.00034 33.7 1.2 13 273-285 2-14 (202)
206 KOG2134 Polynucleotide kinase 37.4 46 0.00099 35.8 4.5 58 268-335 73-130 (422)
207 PF05761 5_nucleotid: 5' nucle 36.4 65 0.0014 35.0 5.6 52 307-358 180-240 (448)
208 COG4229 Predicted enolase-phos 32.7 47 0.001 32.5 3.4 90 310-400 103-197 (229)
209 TIGR02826 RNR_activ_nrdG3 anae 31.8 97 0.0021 28.4 5.2 71 298-388 65-137 (147)
210 PF00702 Hydrolase: haloacid d 28.6 32 0.00069 31.4 1.5 15 271-285 2-16 (215)
211 PF13701 DDE_Tnp_1_4: Transpos 28.1 1.3E+02 0.0028 32.6 6.2 81 270-350 139-241 (448)
212 KOG3189 Phosphomannomutase [Li 26.8 90 0.002 31.0 4.2 43 267-332 8-50 (252)
213 TIGR01459 HAD-SF-IIA-hyp4 HAD- 23.4 9.8 0.00021 36.8 -3.0 88 312-401 140-235 (242)
214 PLN02499 glycerol-3-phosphate 22.4 51 0.0011 36.4 1.9 23 327-349 110-133 (498)
215 PF06941 NT5C: 5' nucleotidase 22.0 54 0.0012 30.5 1.7 16 270-285 2-17 (191)
216 cd06537 CIDE_N_B CIDE_N domain 21.0 1.3E+02 0.0029 25.4 3.6 16 270-285 39-54 (81)
217 PRK11033 zntA zinc/cadmium/mer 20.4 2.8E+02 0.0061 32.0 7.3 75 307-392 565-640 (741)
218 TIGR01458 HAD-SF-IIA-hyp3 HAD- 20.3 9.2 0.0002 37.7 -4.0 89 313-402 123-219 (257)
No 1
>KOG1605 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=100.00 E-value=1.3e-47 Score=376.55 Aligned_cols=198 Identities=55% Similarity=0.900 Sum_probs=179.1
Q ss_pred HhhcCCCcccc-cCCCCCCCCCccCCCCceEEEEecCccccccc--ccccCCCCceEEEEecceeeeEEEeeCccHHHHH
Q 013017 243 FIKYLPELSDI-ANFRPTASPKETQGRKSVTLVLDLDETLVHST--LEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFL 319 (451)
Q Consensus 243 fik~lP~ls~~-~~~~p~l~Pk~~~~~kkktLVLDLDeTLVhSs--~~~~~~~df~~~v~~~~~~~~~yV~lRPgL~eFL 319 (451)
+.+..+..... ....|.+++ .....+|++||||||||||||+ ..+...++|.+++.+++..+.+||.+|||+++||
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~kk~lVLDLDeTLvHss~~~~~~~~~d~~~~v~~~~~~~~~yV~kRP~vdeFL 140 (262)
T KOG1605|consen 62 FEKYQPVKYASQTPLSPVLPL-RLATVGRKTLVLDLDETLVHSSLNLKPIVNADFTVPVEIDGHIHQVYVRKRPHVDEFL 140 (262)
T ss_pred hhhcccccccccccccccCCc-ccccCCCceEEEeCCCcccccccccCCCCCcceeeeeeeCCcceEEEEEcCCCHHHHH
Confidence 33443333333 333444443 4447889999999999999999 6777899999999999999999999999999999
Q ss_pred HHhHhccEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeeceeeeeCCcccccccccCCCCCcEEEEECChhhhccCCCc
Q 013017 320 ERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNN 399 (451)
Q Consensus 320 ~~Lsk~YEIvVfTAs~~~YAd~ILd~LDP~~~lf~~rL~Re~C~~~~g~yiKDLs~LgrdlskvIIIDDsp~~~~~qpeN 399 (451)
..++++||++||||+.+.||.+|++.||+.+++|.+|+||++|.+.+|+|+|||+.+|+++++||||||+|.+|.+||+|
T Consensus 141 ~~~s~~~e~v~FTAs~~~Ya~~v~D~LD~~~~i~~~RlyR~~C~~~~g~yvKdls~~~~dL~~viIiDNsP~sy~~~p~N 220 (262)
T KOG1605|consen 141 SRVSKWYELVLFTASLEVYADPLLDILDPDRKIISHRLYRDSCTLKDGNYVKDLSVLGRDLSKVIIVDNSPQSYRLQPEN 220 (262)
T ss_pred HHhHHHHHHHHHHhhhHHHHHHHHHHccCCCCeeeeeecccceEeECCcEEEEcceeccCcccEEEEcCChHHhccCccC
Confidence 99999999999999999999999999999888999999999999999999999999999999999999999999999999
Q ss_pred eeeeccccCCCCchHHHHHHHHHHhccCCCCcHHHHHhhhCC
Q 013017 400 GIPIESWFDDPSDCSLISLLPFLDILADAEDVRPIIAKTFGS 441 (451)
Q Consensus 400 gIpI~~f~gd~~D~eLl~LlpfLe~L~~~~DVR~iL~k~f~~ 441 (451)
||||++|++++.|+||++|+|||+.|+..+|||++++++|+.
T Consensus 221 gIpI~sw~~d~~D~eLL~LlpfLe~L~~~~Dvr~~l~~~~~~ 262 (262)
T KOG1605|consen 221 GIPIKSWFDDPTDTELLKLLPFLEALAFVDDVRPILARRFGN 262 (262)
T ss_pred CCcccccccCCChHHHHHHHHHHHHhcccccHHHHHHHhhcC
Confidence 999999999999999999999999999999999999999873
No 2
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=100.00 E-value=6.6e-40 Score=300.60 Aligned_cols=161 Identities=57% Similarity=0.931 Sum_probs=153.0
Q ss_pred ceEEEEecCcccccccccccC-CCCceEEEEecceeeeEEEeeCccHHHHHHHhHhccEEEEEcCCcHHHHHHHHHHhCC
Q 013017 270 SVTLVLDLDETLVHSTLEYCD-DADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDP 348 (451)
Q Consensus 270 kktLVLDLDeTLVhSs~~~~~-~~df~~~v~~~~~~~~~yV~lRPgL~eFL~~Lsk~YEIvVfTAs~~~YAd~ILd~LDP 348 (451)
|++|||||||||||+++.+.. ..++.+.+..++...++||++|||+.+||++|+++|+|+|||++.+.||++++++|||
T Consensus 1 k~~lvlDLDeTLi~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~RPgl~eFL~~l~~~yei~I~Ts~~~~yA~~il~~ldp 80 (162)
T TIGR02251 1 KKTLVLDLDETLVHSTFKMPKVDADFKVPVLIDGKIIPVYVFKRPHVDEFLERVSKWYELVIFTASLEEYADPVLDILDR 80 (162)
T ss_pred CcEEEEcCCCCcCCCCCCCCCCCCceEEEEEecCcEEEEEEEECCCHHHHHHHHHhcCEEEEEcCCcHHHHHHHHHHHCc
Confidence 579999999999999987765 6778888888888889999999999999999999999999999999999999999999
Q ss_pred CCCceeEEEeeceeeeeCCcccccccccCCCCCcEEEEECChhhhccCCCceeeeccccCCCCchHHHHHHHHHHhccCC
Q 013017 349 DGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIESWFDDPSDCSLISLLPFLDILADA 428 (451)
Q Consensus 349 ~~~lf~~rL~Re~C~~~~g~yiKDLs~LgrdlskvIIIDDsp~~~~~qpeNgIpI~~f~gd~~D~eLl~LlpfLe~L~~~ 428 (451)
.+.+|+++++|++|...+|.|.|+|+.+|++++++|||||++..|..||+|||+|.+|.|+.+|++|++|++||+.|+.+
T Consensus 81 ~~~~f~~~l~r~~~~~~~~~~~K~L~~l~~~~~~vIiVDD~~~~~~~~~~NgI~i~~f~~~~~D~~L~~l~~~L~~l~~~ 160 (162)
T TIGR02251 81 GGKVISRRLYRESCVFTNGKYVKDLSLVGKDLSKVIIIDNSPYSYSLQPDNAIPIKSWFGDPNDTELLNLIPFLEGLRFE 160 (162)
T ss_pred CCCEEeEEEEccccEEeCCCEEeEchhcCCChhhEEEEeCChhhhccCccCEeecCCCCCCCCHHHHHHHHHHHHHHhcc
Confidence 98899999999999999899999999999999999999999999999999999999999999999999999999999988
Q ss_pred CC
Q 013017 429 ED 430 (451)
Q Consensus 429 ~D 430 (451)
+|
T Consensus 161 ~~ 162 (162)
T TIGR02251 161 DD 162 (162)
T ss_pred CC
Confidence 76
No 3
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=100.00 E-value=4.6e-38 Score=283.59 Aligned_cols=158 Identities=51% Similarity=0.856 Sum_probs=130.4
Q ss_pred eEEEEecCcccccccccccCCCCceEEEEecceeeeEEEeeCccHHHHHHHhHhccEEEEEcCCcHHHHHHHHHHhCCCC
Q 013017 271 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDG 350 (451)
Q Consensus 271 ktLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~yV~lRPgL~eFL~~Lsk~YEIvVfTAs~~~YAd~ILd~LDP~~ 350 (451)
|+|||||||||||+...+....++... . ....++|++|||+++||++++++|+|+|||++++.||++|++.|+|.+
T Consensus 1 k~LVlDLD~TLv~~~~~~~~~~~~~~~---~-~~~~~~v~~RP~l~~FL~~l~~~~ev~i~T~~~~~ya~~v~~~ldp~~ 76 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSSKSPLPYDFKII---D-QRGGYYVKLRPGLDEFLEELSKHYEVVIWTSASEEYAEPVLDALDPNG 76 (159)
T ss_dssp EEEEEE-CTTTEEEESSTCTT-SEEEE---T-EEEEEEEEE-TTHHHHHHHHHHHCEEEEE-SS-HHHHHHHHHHHTTTT
T ss_pred CEEEEeCCCcEEEEeecCCCCccccee---c-cccceeEeeCchHHHHHHHHHHhceEEEEEeehhhhhhHHHHhhhhhc
Confidence 689999999999998765443333222 2 566789999999999999999999999999999999999999999988
Q ss_pred CceeEEEeeceeeeeCCcccccccccCCCCCcEEEEECChhhhccCCCceeeeccccCC-CCchHHHHHHHHHHhccCCC
Q 013017 351 KLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIESWFDD-PSDCSLISLLPFLDILADAE 429 (451)
Q Consensus 351 ~lf~~rL~Re~C~~~~g~yiKDLs~LgrdlskvIIIDDsp~~~~~qpeNgIpI~~f~gd-~~D~eLl~LlpfLe~L~~~~ 429 (451)
.+|.++++|++|....|.+.|||+.+|+++++||||||++.+|..|++|+|+|++|.++ +.|++|++|++||+.|+..+
T Consensus 77 ~~~~~~~~r~~~~~~~~~~~KdL~~l~~~~~~vvivDD~~~~~~~~~~N~i~v~~f~~~~~~D~~L~~l~~~L~~l~~~~ 156 (159)
T PF03031_consen 77 KLFSRRLYRDDCTFDKGSYIKDLSKLGRDLDNVVIVDDSPRKWALQPDNGIPVPPFFGDTPNDRELLRLLPFLEELAKED 156 (159)
T ss_dssp SSEEEEEEGGGSEEETTEEE--GGGSSS-GGGEEEEES-GGGGTTSGGGEEE----SSCHTT--HHHHHHHHHHHHHTHS
T ss_pred cccccccccccccccccccccchHHHhhccccEEEEeCCHHHeeccCCceEEeccccCCCcchhHHHHHHHHHHHhCccc
Confidence 89999999999999888889999999999999999999999999999999999999999 99999999999999999999
Q ss_pred CcH
Q 013017 430 DVR 432 (451)
Q Consensus 430 DVR 432 (451)
|||
T Consensus 157 Dvr 159 (159)
T PF03031_consen 157 DVR 159 (159)
T ss_dssp -CH
T ss_pred CCC
Confidence 998
No 4
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=100.00 E-value=4.2e-36 Score=284.51 Aligned_cols=158 Identities=23% Similarity=0.281 Sum_probs=136.2
Q ss_pred CCCceEEEEecCcccccccccccCCCCceEEEEecceeeeEEEeeCccHHHHHHHhHhccEEEEEcCCcHHHHHHHHHHh
Q 013017 267 GRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDIL 346 (451)
Q Consensus 267 ~~kkktLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~yV~lRPgL~eFL~~Lsk~YEIvVfTAs~~~YAd~ILd~L 346 (451)
+.+|++|||||||||||+... ..++|+.+|||+++||++++++|||+||||+++.||+.+++.|
T Consensus 18 ~~~kklLVLDLDeTLvh~~~~----------------~~~~~~~kRP~l~eFL~~~~~~feIvVwTAa~~~ya~~~l~~l 81 (195)
T TIGR02245 18 REGKKLLVLDIDYTLFDHRSP----------------AETGEELMRPYLHEFLTSAYEDYDIVIWSATSMKWIEIKMTEL 81 (195)
T ss_pred CCCCcEEEEeCCCceEccccc----------------CCCceEEeCCCHHHHHHHHHhCCEEEEEecCCHHHHHHHHHHh
Confidence 567899999999999997421 1145789999999999999999999999999999999999999
Q ss_pred CCCC-CceeEEEeeceee------eeCCc-ccccccccC------CCCCcEEEEECChhhhccCCCceeeeccccC----
Q 013017 347 DPDG-KLISRRVYRESCI------FSDGT-YTKDLTVLG------VDLAKVAIIDNSPQVFRLQVNNGIPIESWFD---- 408 (451)
Q Consensus 347 DP~~-~lf~~rL~Re~C~------~~~g~-yiKDLs~Lg------rdlskvIIIDDsp~~~~~qpeNgIpI~~f~g---- 408 (451)
++.+ ..+..++++++|. ...|. ++|||+.++ .++++||||||+|.++.+||+|||+|++|++
T Consensus 82 ~~~~~~~~~i~~~ld~~~~~~~~~~~~g~~~vKdL~~lw~~l~~~~~~~ntiiVDd~p~~~~~~P~N~i~I~~f~~~~~~ 161 (195)
T TIGR02245 82 GVLTNPNYKITFLLDSTAMITVHTPRRGKFDVKPLGVIWALLPEFYSMKNTIMFDDLRRNFLMNPQNGLKIRPFKKAHAN 161 (195)
T ss_pred cccCCccceEEEEeccccceeeEeeccCcEEEeecHHhhhhcccCCCcccEEEEeCCHHHHhcCCCCccccCCccccCCC
Confidence 8753 2355666778873 23454 599999873 3889999999999999999999999999995
Q ss_pred CCCchHHHHHHHHHHhccCCCCcHHHHHhhhC
Q 013017 409 DPSDCSLISLLPFLDILADAEDVRPIIAKTFG 440 (451)
Q Consensus 409 d~~D~eLl~LlpfLe~L~~~~DVR~iL~k~f~ 440 (451)
++.|.||+.|+|||+.|+.++|||++++++|.
T Consensus 162 ~~~D~eL~~L~~yL~~la~~~Dvr~~~~~~w~ 193 (195)
T TIGR02245 162 RGTDQELLKLTQYLKTIAELEDFSSLDHKEWE 193 (195)
T ss_pred CcccHHHHHHHHHHHHHhcCcccchhhhcccc
Confidence 57999999999999999999999999998874
No 5
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=99.97 E-value=7.5e-31 Score=240.31 Aligned_cols=138 Identities=31% Similarity=0.449 Sum_probs=117.4
Q ss_pred CCCceEEEEecCcccccccccccCCCCce------------EEEEecceeeeEEEeeCccHHHHHHHhHhccEEEEEcCC
Q 013017 267 GRKSVTLVLDLDETLVHSTLEYCDDADFT------------FTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTAS 334 (451)
Q Consensus 267 ~~kkktLVLDLDeTLVhSs~~~~~~~df~------------~~v~~~~~~~~~yV~lRPgL~eFL~~Lsk~YEIvVfTAs 334 (451)
..+|++||||||+|||||+..+....... -...+......+++++|||+.+||+++++.|+++|||++
T Consensus 3 ~~~kl~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~rPgv~efL~~l~~~yel~I~T~~ 82 (156)
T TIGR02250 3 REKKLHLVLDLDQTLIHTTKDPTLSEWEKYDIEEPNSETRRDLRKFNLGTMWYLTKLRPFLHEFLKEASKLYEMHVYTMG 82 (156)
T ss_pred cCCceEEEEeCCCCcccccccCccchhhhcccccCCccccccceEEEcCCeEEEEEECCCHHHHHHHHHhhcEEEEEeCC
Confidence 57899999999999999987654322111 012233335678999999999999999999999999999
Q ss_pred cHHHHHHHHHHhCCCCCceeEE-EeeceeeeeCCccccccc-ccCCCCCcEEEEECChhhhccCCCceeeecccc
Q 013017 335 QSIYAAQLLDILDPDGKLISRR-VYRESCIFSDGTYTKDLT-VLGVDLAKVAIIDNSPQVFRLQVNNGIPIESWF 407 (451)
Q Consensus 335 ~~~YAd~ILd~LDP~~~lf~~r-L~Re~C~~~~g~yiKDLs-~LgrdlskvIIIDDsp~~~~~qpeNgIpI~~f~ 407 (451)
.+.||+++++.|||.+.+|.+| ++|++|. |.+.|||+ .+|++++++|||||++.+|..||+|+|+|++|.
T Consensus 83 ~~~yA~~vl~~ldp~~~~F~~ri~~rd~~~---~~~~KdL~~i~~~d~~~vvivDd~~~~~~~~~~N~i~i~~~~ 154 (156)
T TIGR02250 83 TRAYAQAIAKLIDPDGKYFGDRIISRDESG---SPHTKSLLRLFPADESMVVIIDDREDVWPWHKRNLIQIEPYN 154 (156)
T ss_pred cHHHHHHHHHHhCcCCCeeccEEEEeccCC---CCccccHHHHcCCCcccEEEEeCCHHHhhcCccCEEEeCCcc
Confidence 9999999999999998899666 5699985 78999995 569999999999999999999999999999996
No 6
>KOG2832 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=99.97 E-value=9.2e-31 Score=264.03 Aligned_cols=158 Identities=36% Similarity=0.659 Sum_probs=149.4
Q ss_pred cCCCCceEEEEecCcccccccccccCCCCceEEEEecceeeeEEEeeCccHHHHHHHhHhccEEEEEcCCcHHHHHHHHH
Q 013017 265 TQGRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLD 344 (451)
Q Consensus 265 ~~~~kkktLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~yV~lRPgL~eFL~~Lsk~YEIvVfTAs~~~YAd~ILd 344 (451)
+..++++||||+|.++|||..|.. ..+|.+++|||++.||..++++|||||||+...-|+.++++
T Consensus 184 Py~Qp~yTLVleledvLVhpdws~---------------~tGwRf~kRPgvD~FL~~~a~~yEIVi~sse~gmt~~pl~d 248 (393)
T KOG2832|consen 184 PYEQPPYTLVLELEDVLVHPDWSY---------------KTGWRFKKRPGVDYFLGHLAKYYEIVVYSSEQGMTVFPLLD 248 (393)
T ss_pred cccCCCceEEEEeeeeEeccchhh---------------hcCceeccCchHHHHHHhhcccceEEEEecCCccchhhhHh
Confidence 446889999999999999998763 35788999999999999999999999999999999999999
Q ss_pred HhCCCCCceeEEEeeceeeeeCCcccccccccCCCCCcEEEEECChhhhccCCCceeeeccccCCCCchHHHHHHHHHHh
Q 013017 345 ILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIESWFDDPSDCSLISLLPFLDI 424 (451)
Q Consensus 345 ~LDP~~~lf~~rL~Re~C~~~~g~yiKDLs~LgrdlskvIIIDDsp~~~~~qpeNgIpI~~f~gd~~D~eLl~LlpfLe~ 424 (451)
.|||.| +|+++|||++|.+.+|..+|||+.|+||+++||+||=.+..+.+||+|.|++++|.|+.+|+.|++|++||+.
T Consensus 249 ~lDP~g-~IsYkLfr~~t~y~~G~HvKdls~LNRdl~kVivVd~d~~~~~l~P~N~l~l~~W~Gn~dDt~L~dL~~FL~~ 327 (393)
T KOG2832|consen 249 ALDPKG-YISYKLFRGATKYEEGHHVKDLSKLNRDLQKVIVVDFDANSYKLQPENMLPLEPWSGNDDDTSLFDLLAFLEY 327 (393)
T ss_pred hcCCcc-eEEEEEecCcccccCccchhhhhhhccccceeEEEEccccccccCcccccccCcCCCCcccchhhhHHHHHHH
Confidence 999997 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccC--CCCcHHHHHhh
Q 013017 425 LAD--AEDVRPIIAKT 438 (451)
Q Consensus 425 L~~--~~DVR~iL~k~ 438 (451)
|+. ++|||++|...
T Consensus 328 ia~~~~eDvR~vL~~y 343 (393)
T KOG2832|consen 328 IAQQQVEDVRPVLQSY 343 (393)
T ss_pred HHHccHHHHHHHHHHh
Confidence 985 79999999644
No 7
>COG5190 FCP1 TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=99.95 E-value=2e-28 Score=251.71 Aligned_cols=178 Identities=44% Similarity=0.724 Sum_probs=166.5
Q ss_pred CccCCCCceEEEEecCcccccccccccCCCCceEEEEecceeeeEEEeeCccHHHHHHHhHhccEEEEEcCCcHHHHHHH
Q 013017 263 KETQGRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQL 342 (451)
Q Consensus 263 k~~~~~kkktLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~yV~lRPgL~eFL~~Lsk~YEIvVfTAs~~~YAd~I 342 (451)
.......+++|++|||+||+||....+...+|...+...+..+.+||..|||+++||..++++|++++||++.+.||++|
T Consensus 205 ~~~~~~~~k~L~l~lde~l~~S~~~~~~~~df~~~~e~~~~~~~~~v~kRp~l~~fl~~ls~~~~l~~ft~s~~~y~~~v 284 (390)
T COG5190 205 VSKSTSPKKTLVLDLDETLVHSSFRYITLLDFLVKVEISLLQHLVYVSKRPELDYFLGKLSKIHELVYFTASVKRYADPV 284 (390)
T ss_pred hhcCCCCccccccCCCccceeeccccccccchhhccccccceeEEEEcCChHHHHHHhhhhhhEEEEEEecchhhhcchH
Confidence 33445677899999999999999888888888888888888899999999999999999999999999999999999999
Q ss_pred HHHhCCCCCceeEEEeeceeeeeCCcccccccccCCCCCcEEEEECChhhhccCCCceeeeccccCCCCchHHHHHHHHH
Q 013017 343 LDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIESWFDDPSDCSLISLLPFL 422 (451)
Q Consensus 343 Ld~LDP~~~lf~~rL~Re~C~~~~g~yiKDLs~LgrdlskvIIIDDsp~~~~~qpeNgIpI~~f~gd~~D~eLl~LlpfL 422 (451)
++.|++.+ .|++++||++|....|.|+|||..+++++.++||||++|.+|.+||+|+|+|.+|.+++.|.+|++|++||
T Consensus 285 ~d~l~~~k-~~~~~lfr~sc~~~~G~~ikDis~i~r~l~~viiId~~p~SY~~~p~~~i~i~~W~~d~~d~el~~ll~~l 363 (390)
T COG5190 285 LDILDSDK-VFSHRLFRESCVSYLGVYIKDISKIGRSLDKVIIIDNSPASYEFHPENAIPIEKWISDEHDDELLNLLPFL 363 (390)
T ss_pred HHhccccc-eeehhhhcccceeccCchhhhHHhhccCCCceEEeeCChhhhhhCccceeccCcccccccchhhhhhcccc
Confidence 99999998 89999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhccC--CCCcHHHHHhhhCC
Q 013017 423 DILAD--AEDVRPIIAKTFGS 441 (451)
Q Consensus 423 e~L~~--~~DVR~iL~k~f~~ 441 (451)
+.|.. ..||+.++..+-+.
T Consensus 364 e~L~~~~~~d~~~~l~~~~~~ 384 (390)
T COG5190 364 EDLPDRDLKDVSSILQSRLEK 384 (390)
T ss_pred cccccccchhhhhhhhhhhHh
Confidence 99998 89999999766443
No 8
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=99.95 E-value=7.1e-27 Score=210.55 Aligned_cols=145 Identities=49% Similarity=0.859 Sum_probs=130.4
Q ss_pred CceEEEEecCcccccccc---cccCCCCceEEEEecceeeeEEEeeCccHHHHHHHhHhccEEEEEcCCcHHHHHHHHHH
Q 013017 269 KSVTLVLDLDETLVHSTL---EYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDI 345 (451)
Q Consensus 269 kkktLVLDLDeTLVhSs~---~~~~~~df~~~v~~~~~~~~~yV~lRPgL~eFL~~Lsk~YEIvVfTAs~~~YAd~ILd~ 345 (451)
+|++|||||||||||+.. .+.....+.+.+.+......+++.+|||+.+||++|++.|+++|||++.+.||+.++++
T Consensus 1 ~k~~lvldld~tl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~pG~~e~L~~L~~~~~l~I~Ts~~~~~~~~il~~ 80 (148)
T smart00577 1 KKKTLVLDLDETLVHSTHRSFKEWTNRDFIVPVLIDGHPHGVYVKKRPGVDEFLKRASELFELVVFTAGLRMYADPVLDL 80 (148)
T ss_pred CCcEEEEeCCCCeECCCCCcCCCCCccceEEEEEeCCceEEEEEEECCCHHHHHHHHHhccEEEEEeCCcHHHHHHHHHH
Confidence 578999999999999963 22234445666677788888999999999999999999999999999999999999999
Q ss_pred hCCCCCceeEEEeeceeeeeCCcccccccccCCCCCcEEEEECChhhhccCCCceeeeccccCCCCch
Q 013017 346 LDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIESWFDDPSDC 413 (451)
Q Consensus 346 LDP~~~lf~~rL~Re~C~~~~g~yiKDLs~LgrdlskvIIIDDsp~~~~~qpeNgIpI~~f~gd~~D~ 413 (451)
+++.+.+|..++++++|...++.|.|+|+++|++++++|+|||++..|..+++|||+|++|.++++|+
T Consensus 81 l~~~~~~f~~i~~~~d~~~~KP~~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~~f~~~~~d~ 148 (148)
T smart00577 81 LDPKKYFGYRRLFRDECVFVKGKYVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIKPWFGDPDDT 148 (148)
T ss_pred hCcCCCEeeeEEECccccccCCeEeecHHHcCCChhcEEEEECCHHHhhcCccCEEEecCcCCCCCCC
Confidence 99976567999999999988888999999999999999999999999999999999999999999874
No 9
>KOG0323 consensus TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=99.76 E-value=1.4e-18 Score=187.99 Aligned_cols=137 Identities=32% Similarity=0.455 Sum_probs=107.3
Q ss_pred CCceEEEEecCcccccccccccC--------CCCc-----eEEEEec--ceeeeEEEeeCccHHHHHHHhHhccEEEEEc
Q 013017 268 RKSVTLVLDLDETLVHSTLEYCD--------DADF-----TFTVFFN--MKEHTVYVKQRPHLKTFLERVAEMFEVVIFT 332 (451)
Q Consensus 268 ~kkktLVLDLDeTLVhSs~~~~~--------~~df-----~~~v~~~--~~~~~~yV~lRPgL~eFL~~Lsk~YEIvVfT 332 (451)
++++.||+|||.||+|+.....- .... .-...++ .....+||++|||+++||++++++||++|||
T Consensus 144 ~~~L~lv~Dld~tllh~~~~~~l~e~~~~l~~~~~~~~sn~dl~~~~~~~~~~~~~vKlRP~~~efL~~~sklfemhVyT 223 (635)
T KOG0323|consen 144 RKKLHLVLDLDHTLLHTILKSDLSETEKYLKEEAESVESNKDLFRFNPLGHDTEYLVKLRPFVHEFLKEANKLFEMHVYT 223 (635)
T ss_pred hhcceeehhhhhHHHHhhccchhhhhhhhcccccccccccccceeecccCCCceEEEEeCccHHHHHHHHHhhceeEEEe
Confidence 34469999999999999742210 0000 0011122 3334689999999999999999999999999
Q ss_pred CCcHHHHHHHHHHhCCCCCceeEEEe-eceeeeeCCccccccccc-CCCCCcEEEEECChhhhccCCCceeeecccc
Q 013017 333 ASQSIYAAQLLDILDPDGKLISRRVY-RESCIFSDGTYTKDLTVL-GVDLAKVAIIDNSPQVFRLQVNNGIPIESWF 407 (451)
Q Consensus 333 As~~~YAd~ILd~LDP~~~lf~~rL~-Re~C~~~~g~yiKDLs~L-grdlskvIIIDDsp~~~~~qpeNgIpI~~f~ 407 (451)
.|.+.||..|++.|||+++||+.|++ |+. ....-.+||..+ .++.+++|||||+..+|..++.|.|.|.+|.
T Consensus 224 mg~R~YA~~i~~liDP~~~lF~dRIisrde---~~~~kt~dL~~~~p~g~smvvIIDDr~dVW~~~~~nLI~i~~y~ 297 (635)
T KOG0323|consen 224 MGTRDYALEIAKLIDPEGKYFGDRIISRDE---SPFFKTLDLVLLFPCGDSMVVIIDDRSDVWPDHKRNLIQIAPYP 297 (635)
T ss_pred ccchHHHHHHHHHhCCCCccccceEEEecC---CCcccccccccCCCCCCccEEEEeCccccccCCCcceEEeeeee
Confidence 99999999999999999999998886 665 233445666655 4678889999999999999999999999984
No 10
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=98.75 E-value=3e-08 Score=93.07 Aligned_cols=137 Identities=14% Similarity=0.063 Sum_probs=92.8
Q ss_pred eEEEEecCcccccccccccCCCCceEEEEecc---eeeeEEEeeCccHHHHHHHhH-hccEEEEEcCC-cHHHHHHHHHH
Q 013017 271 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNM---KEHTVYVKQRPHLKTFLERVA-EMFEVVIFTAS-QSIYAAQLLDI 345 (451)
Q Consensus 271 ktLVLDLDeTLVhSs~~~~~~~df~~~v~~~~---~~~~~yV~lRPgL~eFL~~Ls-k~YEIvVfTAs-~~~YAd~ILd~ 345 (451)
..+|||||+||..-.....-...+...-..++ .....-+.++||+.++|++|. +++.+.|.|++ ...++..+++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~ 82 (174)
T TIGR01685 3 RVIVFDLDGTLWDHYMISLLGGPFKPVKQNNSIIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGT 82 (174)
T ss_pred cEEEEeCCCCCcCcccccccCCCceeccCCCCeEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHh
Confidence 47899999999875533222222211100110 112234788999999999998 77999999988 99999999999
Q ss_pred hCCC--C------CceeEEEeeceeeeeCC--cccccccc-c--CCCCCcEEEEECChhhhccCCCceeeecccc
Q 013017 346 LDPD--G------KLISRRVYRESCIFSDG--TYTKDLTV-L--GVDLAKVAIIDNSPQVFRLQVNNGIPIESWF 407 (451)
Q Consensus 346 LDP~--~------~lf~~rL~Re~C~~~~g--~yiKDLs~-L--grdlskvIIIDDsp~~~~~qpeNgIpI~~f~ 407 (451)
++.. + .+|+.++..+.....+. ...+.+.. + |.+++++++|||++........+|+.+.-..
T Consensus 83 ~~l~~~~~~~~~~~~Fd~iv~~~~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~v~ 157 (174)
T TIGR01685 83 FEITYAGKTVPMHSLFDDRIEIYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCYCP 157 (174)
T ss_pred CCcCCCCCcccHHHhceeeeeccCCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEEcC
Confidence 9875 1 37888877554211111 11222322 2 5889999999999998877778888876553
No 11
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=98.64 E-value=2e-08 Score=88.79 Aligned_cols=111 Identities=14% Similarity=0.144 Sum_probs=77.6
Q ss_pred eEEEEecCcccccccccccCCCCceEEEEecceeeeEEEeeCccHHHHHHHhH-hccEEEEEcCC-cHHHHHHHHHHhCC
Q 013017 271 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTAS-QSIYAAQLLDILDP 348 (451)
Q Consensus 271 ktLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~yV~lRPgL~eFL~~Ls-k~YEIvVfTAs-~~~YAd~ILd~LDP 348 (451)
+.+|+||||||+......... +-.. +. . .+.||+.++|++++ +++.++|.|++ .+.++..+++.+.+
T Consensus 1 kli~~DlD~Tl~~~~~~~~~~-~~~~----~~---~---~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~ 69 (128)
T TIGR01681 1 KVIVFDLDNTLWTGENIVVGE-DPII----DL---E---VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFED 69 (128)
T ss_pred CEEEEeCCCCCCCCCcccccC-Ccch----hh---H---HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhccc
Confidence 368999999999762110000 0000 00 0 46899999999998 68999999999 99999999998872
Q ss_pred ------CCCceeEEEeeceeeeeCCcccccccccC--CCCCcEEEEECChhhh
Q 013017 349 ------DGKLISRRVYRESCIFSDGTYTKDLTVLG--VDLAKVAIIDNSPQVF 393 (451)
Q Consensus 349 ------~~~lf~~rL~Re~C~~~~g~yiKDLs~Lg--rdlskvIIIDDsp~~~ 393 (451)
-..+|...+..+.. -....|.+-+.++| ..++++++|||++...
T Consensus 70 ~~~i~~l~~~f~~~~~~~~~-pkp~~~~~a~~~lg~~~~p~~~l~igDs~~n~ 121 (128)
T TIGR01681 70 FGIIFPLAEYFDPLTIGYWL-PKSPRLVEIALKLNGVLKPKSILFVDDRPDNN 121 (128)
T ss_pred cccchhhHhhhhhhhhcCCC-cHHHHHHHHHHHhcCCCCcceEEEECCCHhHH
Confidence 12356655544321 11225777888899 9999999999998753
No 12
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=98.62 E-value=1.2e-08 Score=100.60 Aligned_cols=98 Identities=11% Similarity=0.175 Sum_probs=83.5
Q ss_pred EeeCccHHHHHHHhH-hccEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeeceeeeeCC---cccccccccCCCCCcEE
Q 013017 309 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG---TYTKDLTVLGVDLAKVA 384 (451)
Q Consensus 309 V~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~YAd~ILd~LDP~~~lf~~rL~Re~C~~~~g---~yiKDLs~LgrdlskvI 384 (451)
+.+.||+.++|++|+ ++|.++|.|++...++..++++++... ||+..+..+.+...+. .|.+.+.++|.+++++|
T Consensus 108 ~~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~-~Fd~ii~~~d~~~~KP~Pe~~~~a~~~l~~~p~~~l 186 (260)
T PLN03243 108 YRLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEG-FFSVVLAAEDVYRGKPDPEMFMYAAERLGFIPERCI 186 (260)
T ss_pred cccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHh-hCcEEEecccCCCCCCCHHHHHHHHHHhCCChHHeE
Confidence 557899999999998 679999999999999999999998776 8999999887765544 67888999999999999
Q ss_pred EEECChhhhccCCCceeeecccc
Q 013017 385 IIDNSPQVFRLQVNNGIPIESWF 407 (451)
Q Consensus 385 IIDDsp~~~~~qpeNgIpI~~f~ 407 (451)
+|+|+..........|+......
T Consensus 187 ~IgDs~~Di~aA~~aG~~~i~v~ 209 (260)
T PLN03243 187 VFGNSNSSVEAAHDGCMKCVAVA 209 (260)
T ss_pred EEcCCHHHHHHHHHcCCEEEEEe
Confidence 99999988777666777655443
No 13
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=98.59 E-value=2.2e-08 Score=97.30 Aligned_cols=97 Identities=16% Similarity=0.249 Sum_probs=83.0
Q ss_pred EeeCccHHHHHHHhH-hccEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeeceeeeeCC---cccccccccCCCCCcEE
Q 013017 309 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG---TYTKDLTVLGVDLAKVA 384 (451)
Q Consensus 309 V~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~YAd~ILd~LDP~~~lf~~rL~Re~C~~~~g---~yiKDLs~LgrdlskvI 384 (451)
+.+.||+.++|++|. +.+.++|.|++.+.+++.+++.++..+ ||+..+..+.+...+. .|.+-+.++|.++++++
T Consensus 107 ~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~-~Fd~iv~~~~~~~~KP~p~~~~~a~~~~~~~~~~~l 185 (248)
T PLN02770 107 LKPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSD-FFQAVIIGSECEHAKPHPDPYLKALEVLKVSKDHTF 185 (248)
T ss_pred CCcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChh-hCcEEEecCcCCCCCCChHHHHHHHHHhCCChhHEE
Confidence 567899999999997 679999999999999999999999876 8999998887665444 67888999999999999
Q ss_pred EEECChhhhccCCCceeeeccc
Q 013017 385 IIDNSPQVFRLQVNNGIPIESW 406 (451)
Q Consensus 385 IIDDsp~~~~~qpeNgIpI~~f 406 (451)
+|+|++.-......+|++....
T Consensus 186 ~vgDs~~Di~aA~~aGi~~i~v 207 (248)
T PLN02770 186 VFEDSVSGIKAGVAAGMPVVGL 207 (248)
T ss_pred EEcCCHHHHHHHHHCCCEEEEE
Confidence 9999998776666778776543
No 14
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=98.59 E-value=2.3e-08 Score=95.99 Aligned_cols=93 Identities=15% Similarity=0.165 Sum_probs=79.1
Q ss_pred EeeCccHHHHHHHhH-hccEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeeceeeeeCC---cccccccccCCCCCcEE
Q 013017 309 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG---TYTKDLTVLGVDLAKVA 384 (451)
Q Consensus 309 V~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~YAd~ILd~LDP~~~lf~~rL~Re~C~~~~g---~yiKDLs~LgrdlskvI 384 (451)
+...||+.++|++|. ++|.++|.|++.+.++...++.++... +|+..+..+.....+. .|.+-++++|.++++++
T Consensus 92 ~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~-~fd~iv~s~~~~~~KP~p~~~~~~~~~~~~~p~~~l 170 (224)
T PRK14988 92 AVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDA-HLDLLLSTHTFGYPKEDQRLWQAVAEHTGLKAERTL 170 (224)
T ss_pred CCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHH-HCCEEEEeeeCCCCCCCHHHHHHHHHHcCCChHHEE
Confidence 567899999999999 579999999999999999999988765 8998888776554443 57888899999999999
Q ss_pred EEECChhhhccCCCceee
Q 013017 385 IIDNSPQVFRLQVNNGIP 402 (451)
Q Consensus 385 IIDDsp~~~~~qpeNgIp 402 (451)
+|+|++.........|+.
T Consensus 171 ~igDs~~di~aA~~aG~~ 188 (224)
T PRK14988 171 FIDDSEPILDAAAQFGIR 188 (224)
T ss_pred EEcCCHHHHHHHHHcCCe
Confidence 999999887666677875
No 15
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=98.55 E-value=1.6e-08 Score=95.12 Aligned_cols=95 Identities=13% Similarity=0.130 Sum_probs=80.4
Q ss_pred EeeCccHHHHHHHhH-hccEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeeceeeeeC---CcccccccccCCCCCcEE
Q 013017 309 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGVDLAKVA 384 (451)
Q Consensus 309 V~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~YAd~ILd~LDP~~~lf~~rL~Re~C~~~~---g~yiKDLs~LgrdlskvI 384 (451)
+...||+.++|++|+ +.+.++|.|++.+.++..+++.++... +|+..+..+.+...+ ..|.+-+..+|.++++++
T Consensus 81 ~~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~-~f~~i~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~ 159 (214)
T PRK13288 81 VTEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDE-FFDVVITLDDVEHAKPDPEPVLKALELLGAKPEEAL 159 (214)
T ss_pred cccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChh-ceeEEEecCcCCCCCCCcHHHHHHHHHcCCCHHHEE
Confidence 567899999999998 579999999999999999999998876 899888877765443 256788888999999999
Q ss_pred EEECChhhhccCCCceeeec
Q 013017 385 IIDNSPQVFRLQVNNGIPIE 404 (451)
Q Consensus 385 IIDDsp~~~~~qpeNgIpI~ 404 (451)
+|+|++.-.......|++..
T Consensus 160 ~iGDs~~Di~aa~~aG~~~i 179 (214)
T PRK13288 160 MVGDNHHDILAGKNAGTKTA 179 (214)
T ss_pred EECCCHHHHHHHHHCCCeEE
Confidence 99999987776666777654
No 16
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=98.50 E-value=2.2e-08 Score=96.34 Aligned_cols=99 Identities=17% Similarity=0.207 Sum_probs=86.8
Q ss_pred EeeCccHHHHHHHhHhc-cEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeeceeeeeCC---cccccccccCCCCCcEE
Q 013017 309 VKQRPHLKTFLERVAEM-FEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG---TYTKDLTVLGVDLAKVA 384 (451)
Q Consensus 309 V~lRPgL~eFL~~Lsk~-YEIvVfTAs~~~YAd~ILd~LDP~~~lf~~rL~Re~C~~~~g---~yiKDLs~LgrdlskvI 384 (451)
+...||+.+||+.|.+. ..+++-|++.+..++.+|+.++..+ +|..++++++....+. .|.+.+.+||.++++||
T Consensus 85 ~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~-~f~~~v~~~dv~~~KP~Pd~yL~Aa~~Lgv~P~~Cv 163 (221)
T COG0637 85 LKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLD-YFDVIVTADDVARGKPAPDIYLLAAERLGVDPEECV 163 (221)
T ss_pred CCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChh-hcchhccHHHHhcCCCCCHHHHHHHHHcCCChHHeE
Confidence 67899999999999955 9999999999999999999999887 8999999888776654 79999999999999999
Q ss_pred EEECChhhhccCCCceeeeccccC
Q 013017 385 IIDNSPQVFRLQVNNGIPIESWFD 408 (451)
Q Consensus 385 IIDDsp~~~~~qpeNgIpI~~f~g 408 (451)
+|||++........-|+.+..+.+
T Consensus 164 viEDs~~Gi~Aa~aAGm~vv~v~~ 187 (221)
T COG0637 164 VVEDSPAGIQAAKAAGMRVVGVPA 187 (221)
T ss_pred EEecchhHHHHHHHCCCEEEEecC
Confidence 999999887666556666666655
No 17
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=98.48 E-value=3.5e-08 Score=90.69 Aligned_cols=92 Identities=22% Similarity=0.283 Sum_probs=74.6
Q ss_pred EeeCccHHHHHHHhHhccEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeeceeee----eC---CcccccccccCCCCC
Q 013017 309 VKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIF----SD---GTYTKDLTVLGVDLA 381 (451)
Q Consensus 309 V~lRPgL~eFL~~Lsk~YEIvVfTAs~~~YAd~ILd~LDP~~~lf~~rL~Re~C~~----~~---g~yiKDLs~Lgrdls 381 (451)
+...||+.++|++|+ +.++|.|++...++..+++.++... +|+.++..+.... .+ ..|.+-+..+|.+++
T Consensus 83 ~~~~~g~~~~L~~L~--~~~~i~Tn~~~~~~~~~l~~~gl~~-~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~ 159 (184)
T TIGR01993 83 LKPDPELRNLLLRLP--GRKIIFTNGDRAHARRALNRLGIED-CFDGIFCFDTANPDYLLPKPSPQAYEKALREAGVDPE 159 (184)
T ss_pred CCCCHHHHHHHHhCC--CCEEEEeCCCHHHHHHHHHHcCcHh-hhCeEEEeecccCccCCCCCCHHHHHHHHHHhCCCcc
Confidence 446799999999998 6899999999999999999998765 8998888766443 12 367788889999999
Q ss_pred cEEEEECChhhhccCCCceeee
Q 013017 382 KVAIIDNSPQVFRLQVNNGIPI 403 (451)
Q Consensus 382 kvIIIDDsp~~~~~qpeNgIpI 403 (451)
++++|+|++.........|+..
T Consensus 160 ~~l~vgD~~~di~aA~~~G~~~ 181 (184)
T TIGR01993 160 RAIFFDDSARNIAAAKALGMKT 181 (184)
T ss_pred ceEEEeCCHHHHHHHHHcCCEE
Confidence 9999999997665555566543
No 18
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=98.46 E-value=2.8e-08 Score=91.04 Aligned_cols=94 Identities=15% Similarity=0.148 Sum_probs=78.0
Q ss_pred EeeCccHHHHHHHhHhccEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeeceeeeeCC---cccccccccCCCCCcEEE
Q 013017 309 VKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG---TYTKDLTVLGVDLAKVAI 385 (451)
Q Consensus 309 V~lRPgL~eFL~~Lsk~YEIvVfTAs~~~YAd~ILd~LDP~~~lf~~rL~Re~C~~~~g---~yiKDLs~LgrdlskvII 385 (451)
+..-|+ .++|+++.+.+.++|.|++.+.+++.+++.++..+ ||+.++..+++...++ .|.+.++++|.+++++|+
T Consensus 87 ~~~~~~-~e~L~~L~~~~~l~I~T~~~~~~~~~~l~~~~l~~-~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~ 164 (188)
T PRK10725 87 VEPLPL-IEVVKAWHGRRPMAVGTGSESAIAEALLAHLGLRR-YFDAVVAADDVQHHKPAPDTFLRCAQLMGVQPTQCVV 164 (188)
T ss_pred CCCccH-HHHHHHHHhCCCEEEEcCCchHHHHHHHHhCCcHh-HceEEEehhhccCCCCChHHHHHHHHHcCCCHHHeEE
Confidence 345676 48999998779999999999999999999998776 8999888887765544 577888899999999999
Q ss_pred EECChhhhccCCCceeeec
Q 013017 386 IDNSPQVFRLQVNNGIPIE 404 (451)
Q Consensus 386 IDDsp~~~~~qpeNgIpI~ 404 (451)
|+|++..+......|++..
T Consensus 165 igDs~~di~aA~~aG~~~i 183 (188)
T PRK10725 165 FEDADFGIQAARAAGMDAV 183 (188)
T ss_pred EeccHhhHHHHHHCCCEEE
Confidence 9999988877666777653
No 19
>PRK11587 putative phosphatase; Provisional
Probab=98.44 E-value=1.3e-07 Score=89.68 Aligned_cols=97 Identities=12% Similarity=0.078 Sum_probs=77.2
Q ss_pred EeeCccHHHHHHHhH-hccEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeeceeeeeCC---cccccccccCCCCCcEE
Q 013017 309 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG---TYTKDLTVLGVDLAKVA 384 (451)
Q Consensus 309 V~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~YAd~ILd~LDP~~~lf~~rL~Re~C~~~~g---~yiKDLs~LgrdlskvI 384 (451)
+.+.||+.++|++|. +.+.++|.|++...++..+++..... +|...+..++....++ .|.+.+..+|..++++|
T Consensus 82 ~~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~--~~~~i~~~~~~~~~KP~p~~~~~~~~~~g~~p~~~l 159 (218)
T PRK11587 82 ITALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLP--APEVFVTAERVKRGKPEPDAYLLGAQLLGLAPQECV 159 (218)
T ss_pred ceeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCC--CccEEEEHHHhcCCCCCcHHHHHHHHHcCCCcccEE
Confidence 567899999999998 67999999999999998888877652 4666666666544433 67888899999999999
Q ss_pred EEECChhhhccCCCceeeecccc
Q 013017 385 IIDNSPQVFRLQVNNGIPIESWF 407 (451)
Q Consensus 385 IIDDsp~~~~~qpeNgIpI~~f~ 407 (451)
+|+|++.........|+...-+.
T Consensus 160 ~igDs~~di~aA~~aG~~~i~v~ 182 (218)
T PRK11587 160 VVEDAPAGVLSGLAAGCHVIAVN 182 (218)
T ss_pred EEecchhhhHHHHHCCCEEEEEC
Confidence 99999987766666777654443
No 20
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=98.43 E-value=7.2e-08 Score=100.53 Aligned_cols=97 Identities=10% Similarity=0.094 Sum_probs=82.5
Q ss_pred EeeCccHHHHHHHhH-hccEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeeceeeeeCC---cccccccccCCCCCcEE
Q 013017 309 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG---TYTKDLTVLGVDLAKVA 384 (451)
Q Consensus 309 V~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~YAd~ILd~LDP~~~lf~~rL~Re~C~~~~g---~yiKDLs~LgrdlskvI 384 (451)
+.+.||+.+||++|. +++.++|.|++.+.+++.+++.++..+ ||+.++..+++...+. .|.+.+..+|.+++++|
T Consensus 215 ~~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~-yFd~Iv~sddv~~~KP~Peifl~A~~~lgl~Peecl 293 (381)
T PLN02575 215 YRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRG-FFSVIVAAEDVYRGKPDPEMFIYAAQLLNFIPERCI 293 (381)
T ss_pred CCcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHH-HceEEEecCcCCCCCCCHHHHHHHHHHcCCCcccEE
Confidence 456899999999998 679999999999999999999999876 9999999888765544 67888999999999999
Q ss_pred EEECChhhhccCCCceeeeccc
Q 013017 385 IIDNSPQVFRLQVNNGIPIESW 406 (451)
Q Consensus 385 IIDDsp~~~~~qpeNgIpI~~f 406 (451)
+|+|++.........|+.....
T Consensus 294 ~IGDS~~DIeAAk~AGm~~IgV 315 (381)
T PLN02575 294 VFGNSNQTVEAAHDARMKCVAV 315 (381)
T ss_pred EEcCCHHHHHHHHHcCCEEEEE
Confidence 9999998776666666655443
No 21
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=98.39 E-value=1.1e-07 Score=94.53 Aligned_cols=95 Identities=11% Similarity=0.078 Sum_probs=73.7
Q ss_pred EeeCccHHHHHHHhH-hccEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeeceeeeeCCcccccccccCCCCCcEEEEE
Q 013017 309 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIID 387 (451)
Q Consensus 309 V~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~YAd~ILd~LDP~~~lf~~rL~Re~C~~~~g~yiKDLs~LgrdlskvIIID 387 (451)
+...||+.++|++|. +.+.++|.|++.+.++..+++.++... +|+..+..+........+.+-+..++.+++++++|+
T Consensus 141 ~~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~-~F~~vi~~~~~~~k~~~~~~~l~~~~~~p~~~l~IG 219 (273)
T PRK13225 141 LQLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRS-LFSVVQAGTPILSKRRALSQLVAREGWQPAAVMYVG 219 (273)
T ss_pred CCcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChh-heEEEEecCCCCCCHHHHHHHHHHhCcChhHEEEEC
Confidence 456799999999998 679999999999999999999998865 788766544322112245566677888999999999
Q ss_pred CChhhhccCCCceeeec
Q 013017 388 NSPQVFRLQVNNGIPIE 404 (451)
Q Consensus 388 Dsp~~~~~qpeNgIpI~ 404 (451)
|++.-.......|+...
T Consensus 220 Ds~~Di~aA~~AG~~~I 236 (273)
T PRK13225 220 DETRDVEAARQVGLIAV 236 (273)
T ss_pred CCHHHHHHHHHCCCeEE
Confidence 99977665555666543
No 22
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=98.37 E-value=4.1e-07 Score=76.23 Aligned_cols=108 Identities=20% Similarity=0.275 Sum_probs=75.7
Q ss_pred EEEEecCcccccccccccCCCCceEEEEecceeeeEEEeeCccHHHHHHHhHh-ccEEEEEcCCcHHHHHHHHHHhCCCC
Q 013017 272 TLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPDG 350 (451)
Q Consensus 272 tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~yV~lRPgL~eFL~~Lsk-~YEIvVfTAs~~~YAd~ILd~LDP~~ 350 (451)
++|||+||||+........ ...+..+|++.++|+++.+ .+.++|.|++.+.++..+++.+....
T Consensus 1 ~~vfD~D~tl~~~~~~~~~---------------~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~ 65 (139)
T cd01427 1 AVLFDLDGTLLDSEPGIAE---------------IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDD 65 (139)
T ss_pred CeEEccCCceEccCccccc---------------cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCch
Confidence 4799999999876422111 2236779999999999995 59999999999999999999987643
Q ss_pred CceeEEEeeceeeee----------------CC---cccccccccCCCCCcEEEEECChhhhcc
Q 013017 351 KLISRRVYRESCIFS----------------DG---TYTKDLTVLGVDLAKVAIIDNSPQVFRL 395 (451)
Q Consensus 351 ~lf~~rL~Re~C~~~----------------~g---~yiKDLs~LgrdlskvIIIDDsp~~~~~ 395 (451)
++..++..+..... ++ .+..-+..++..++.++.|+|++.....
T Consensus 66 -~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~ 128 (139)
T cd01427 66 -YFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPDKLLAALKLLGVDPEEVLMVGDSLNDIEM 128 (139)
T ss_pred -hhhheeccchhhhhcccccccccccccccCCCCHHHHHHHHHHcCCChhhEEEeCCCHHHHHH
Confidence 45545543322211 11 2333445567778999999999965433
No 23
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=98.35 E-value=4.5e-07 Score=79.15 Aligned_cols=114 Identities=20% Similarity=0.211 Sum_probs=78.3
Q ss_pred eEEEEecCcccccccccccCCCCceEEEEecceeeeEEEeeCccHHHHHHHhH-hccEEEEEcCCc--------HHHHHH
Q 013017 271 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQ--------SIYAAQ 341 (451)
Q Consensus 271 ktLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~yV~lRPgL~eFL~~Ls-k~YEIvVfTAs~--------~~YAd~ 341 (451)
+.|+||+||||++..... .........||+.++|++|. +.|.++|.|.+. ..++..
T Consensus 1 k~~~~D~dgtL~~~~~~~---------------~~~~~~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~ 65 (132)
T TIGR01662 1 KGVVLDLDGTLTDDVPYV---------------DDEDERILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVAR 65 (132)
T ss_pred CEEEEeCCCceecCCCCC---------------CCHHHheeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHH
Confidence 378999999999641100 00012456899999999998 679999999999 888999
Q ss_pred HHHHhCCCCCceeEEEeeceeee-eCCccccccccc-CCCCCcEEEEEC-ChhhhccCCCceee
Q 013017 342 LLDILDPDGKLISRRVYRESCIF-SDGTYTKDLTVL-GVDLAKVAIIDN-SPQVFRLQVNNGIP 402 (451)
Q Consensus 342 ILd~LDP~~~lf~~rL~Re~C~~-~~g~yiKDLs~L-grdlskvIIIDD-sp~~~~~qpeNgIp 402 (451)
+++.++.. +...++...... ....|.+-++.+ +.+++++++|+| ...-......+|+.
T Consensus 66 ~l~~~~l~---~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~ 126 (132)
T TIGR01662 66 RLEELGVP---IDVLYACPHCRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLA 126 (132)
T ss_pred HHHHCCCC---EEEEEECCCCCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCe
Confidence 99998764 222233321111 123567778888 599999999999 56555444445543
No 24
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=98.35 E-value=8.3e-08 Score=92.00 Aligned_cols=95 Identities=12% Similarity=0.046 Sum_probs=77.2
Q ss_pred EeeCccHHHHHHHhH-hccEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeeceeeeeCC---cccccccccCCCCCcEE
Q 013017 309 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG---TYTKDLTVLGVDLAKVA 384 (451)
Q Consensus 309 V~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~YAd~ILd~LDP~~~lf~~rL~Re~C~~~~g---~yiKDLs~LgrdlskvI 384 (451)
+.+.||+.++|++|+ +.+.++|.|++...++..+++.++..+ +|...+..+++...+. .|.+-++++|.++++++
T Consensus 94 ~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~-~f~~i~~~~~~~~~KP~p~~~~~~~~~l~~~p~~~l 172 (229)
T PRK13226 94 SQLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQ-RCAVLIGGDTLAERKPHPLPLLVAAERIGVAPTDCV 172 (229)
T ss_pred CeeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchh-cccEEEecCcCCCCCCCHHHHHHHHHHhCCChhhEE
Confidence 677999999999998 569999999999999999999998765 7887776666544333 47788889999999999
Q ss_pred EEECChhhhccCCCceeeec
Q 013017 385 IIDNSPQVFRLQVNNGIPIE 404 (451)
Q Consensus 385 IIDDsp~~~~~qpeNgIpI~ 404 (451)
+|+|++.-.......|+...
T Consensus 173 ~IGDs~~Di~aA~~aG~~~i 192 (229)
T PRK13226 173 YVGDDERDILAARAAGMPSV 192 (229)
T ss_pred EeCCCHHHHHHHHHCCCcEE
Confidence 99999977655555666543
No 25
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=98.28 E-value=1.5e-06 Score=80.27 Aligned_cols=115 Identities=15% Similarity=0.140 Sum_probs=78.3
Q ss_pred eEEEEecCcccccccccccCCCCceEEEEecceeeeEEEeeCccHHHHHHHhH-hccEEEEEcCCcH-------------
Q 013017 271 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQS------------- 336 (451)
Q Consensus 271 ktLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~yV~lRPgL~eFL~~Ls-k~YEIvVfTAs~~------------- 336 (451)
+.|+||+||||+-.... .. ..--+.+.||+.++|++|+ +.|.++|.|++..
T Consensus 2 ~~~~~D~Dgtl~~~~~~-~~--------------~~~~~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~ 66 (176)
T TIGR00213 2 KAIFLDRDGTINIDHGY-VH--------------EIDNFEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQ 66 (176)
T ss_pred CEEEEeCCCCEeCCCCC-CC--------------CHHHeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHH
Confidence 57899999999842110 00 0012456799999999999 6799999999884
Q ss_pred --HHHHHHHHHhCCCCCceeEEEeec-----------eeeeeC---CcccccccccCCCCCcEEEEECChhhhccCCCce
Q 013017 337 --IYAAQLLDILDPDGKLISRRVYRE-----------SCIFSD---GTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNG 400 (451)
Q Consensus 337 --~YAd~ILd~LDP~~~lf~~rL~Re-----------~C~~~~---g~yiKDLs~LgrdlskvIIIDDsp~~~~~qpeNg 400 (451)
.|...++..+... |...++.. .|...+ +.|.+-++++|.+++++++|+|++.-......+|
T Consensus 67 ~~~~~~~~l~~~~~~---~~~i~~~~~~~~~~~~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG 143 (176)
T TIGR00213 67 LTEWMDWSLAERDVD---LDGIYYCPHHPEGVEEFRQVCDCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAK 143 (176)
T ss_pred HHHHHHHHHHHcCCC---ccEEEECCCCCcccccccCCCCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCC
Confidence 3445555554332 44444422 333222 2577888899999999999999998776655677
Q ss_pred eee
Q 013017 401 IPI 403 (451)
Q Consensus 401 IpI 403 (451)
+..
T Consensus 144 ~~~ 146 (176)
T TIGR00213 144 VKT 146 (176)
T ss_pred CcE
Confidence 653
No 26
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=98.28 E-value=2.2e-07 Score=87.51 Aligned_cols=95 Identities=16% Similarity=0.169 Sum_probs=77.1
Q ss_pred EeeCccHHHHHHHhH-hccEEEEEcCCcHHHHHHHHHHhCCCC-CceeEEEeeceeeeeC---CcccccccccCCC-CCc
Q 013017 309 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDG-KLISRRVYRESCIFSD---GTYTKDLTVLGVD-LAK 382 (451)
Q Consensus 309 V~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~YAd~ILd~LDP~~-~lf~~rL~Re~C~~~~---g~yiKDLs~Lgrd-lsk 382 (451)
+.+.||+.+||++|+ +.|.++|.|++...++..+|+.++... .+|+..+..+.-...+ ..|.+-+.++|.. +++
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~ 165 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPSDVAAGRPAPDLILRAMELTGVQDVQS 165 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCCcCCCCCCCHHHHHHHHHHcCCCChhH
Confidence 468899999999997 789999999999999999999998762 5898888776543333 2567778889986 799
Q ss_pred EEEEECChhhhccCCCceeee
Q 013017 383 VAIIDNSPQVFRLQVNNGIPI 403 (451)
Q Consensus 383 vIIIDDsp~~~~~qpeNgIpI 403 (451)
+++|+|++.-.......|++.
T Consensus 166 ~~~igD~~~Di~aa~~aG~~~ 186 (220)
T TIGR03351 166 VAVAGDTPNDLEAGINAGAGA 186 (220)
T ss_pred eEEeCCCHHHHHHHHHCCCCe
Confidence 999999997776655667765
No 27
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=98.25 E-value=2.6e-06 Score=86.12 Aligned_cols=75 Identities=16% Similarity=0.156 Sum_probs=62.4
Q ss_pred CCCceEEEEecCcccccccccccCCCCceEEEEecceeeeEEEeeC-ccHHHHHHHhHh-ccEEEEEcCCcHHHHHHHHH
Q 013017 267 GRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQR-PHLKTFLERVAE-MFEVVIFTASQSIYAAQLLD 344 (451)
Q Consensus 267 ~~kkktLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~yV~lR-PgL~eFL~~Lsk-~YEIvVfTAs~~~YAd~ILd 344 (451)
...++.+||||||||+.... -|.+| ||+.++|++|.+ ++.++|||++.++++..+|+
T Consensus 123 ~~~~kvIvFDLDgTLi~~~~---------------------~v~irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~ 181 (301)
T TIGR01684 123 FEPPHVVVFDLDSTLITDEE---------------------PVRIRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMR 181 (301)
T ss_pred cccceEEEEecCCCCcCCCC---------------------ccccCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHH
Confidence 44566999999999997632 15678 999999999995 69999999999999999999
Q ss_pred HhCCCCCceeEEEeeceee
Q 013017 345 ILDPDGKLISRRVYRESCI 363 (451)
Q Consensus 345 ~LDP~~~lf~~rL~Re~C~ 363 (451)
.++..+ +|+..+..++..
T Consensus 182 ~lGLd~-YFdvIIs~Gdv~ 199 (301)
T TIGR01684 182 KVKLDR-YFDIIISGGHKA 199 (301)
T ss_pred HcCCCc-ccCEEEECCccc
Confidence 999986 887777755443
No 28
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=98.24 E-value=2.5e-07 Score=87.28 Aligned_cols=95 Identities=7% Similarity=0.062 Sum_probs=76.6
Q ss_pred EeeCccHHHHHHHhHhccEEEEEcCCcHHHHHHHHHHhCCCCCcee-EEEeeceeeeeCC---cccccccccCCCCCcEE
Q 013017 309 VKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLIS-RRVYRESCIFSDG---TYTKDLTVLGVDLAKVA 384 (451)
Q Consensus 309 V~lRPgL~eFL~~Lsk~YEIvVfTAs~~~YAd~ILd~LDP~~~lf~-~rL~Re~C~~~~g---~yiKDLs~LgrdlskvI 384 (451)
+...||+.++|++|. +.++|.|++.+.+++.+|+.++... +|. ..+..++....+. .|.+-+.++|..++++|
T Consensus 87 ~~~~~gv~~~L~~L~--~~~~ivTn~~~~~~~~~l~~~~l~~-~F~~~v~~~~~~~~~KP~p~~~~~a~~~~~~~p~~~l 163 (221)
T PRK10563 87 LEPIAGANALLESIT--VPMCVVSNGPVSKMQHSLGKTGMLH-YFPDKLFSGYDIQRWKPDPALMFHAAEAMNVNVENCI 163 (221)
T ss_pred CCcCCCHHHHHHHcC--CCEEEEeCCcHHHHHHHHHhcChHH-hCcceEeeHHhcCCCCCChHHHHHHHHHcCCCHHHeE
Confidence 567899999999994 8999999999999999999988876 785 4555555543333 67888899999999999
Q ss_pred EEECChhhhccCCCceeeeccc
Q 013017 385 IIDNSPQVFRLQVNNGIPIESW 406 (451)
Q Consensus 385 IIDDsp~~~~~qpeNgIpI~~f 406 (451)
+|+|++.........|+++.-+
T Consensus 164 ~igDs~~di~aA~~aG~~~i~~ 185 (221)
T PRK10563 164 LVDDSSAGAQSGIAAGMEVFYF 185 (221)
T ss_pred EEeCcHhhHHHHHHCCCEEEEE
Confidence 9999998776666677776544
No 29
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=98.23 E-value=9e-07 Score=87.61 Aligned_cols=93 Identities=13% Similarity=0.137 Sum_probs=75.3
Q ss_pred EeeCccHHHHHHHhH-hccEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeeceeeeeCC---cccccccccCCCCCcEE
Q 013017 309 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG---TYTKDLTVLGVDLAKVA 384 (451)
Q Consensus 309 V~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~YAd~ILd~LDP~~~lf~~rL~Re~C~~~~g---~yiKDLs~LgrdlskvI 384 (451)
+..+||+.++|++|. +.+.++|.|++...++..+++.++..+ +|+..+..+.+...+. .|.+-+..+|.+++++|
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~-~f~~i~~~d~~~~~Kp~p~~~~~~~~~~g~~~~~~l 178 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGR-YFRWIIGGDTLPQKKPDPAALLFVMKMAGVPPSQSL 178 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHh-hCeEEEecCCCCCCCCCcHHHHHHHHHhCCChhHEE
Confidence 457899999999998 679999999999999999999988765 8887777665443332 46677788899999999
Q ss_pred EEECChhhhccCCCceee
Q 013017 385 IIDNSPQVFRLQVNNGIP 402 (451)
Q Consensus 385 IIDDsp~~~~~qpeNgIp 402 (451)
+|+|++.-......+|+.
T Consensus 179 ~IGD~~~Di~aA~~aGi~ 196 (272)
T PRK13223 179 FVGDSRSDVLAAKAAGVQ 196 (272)
T ss_pred EECCCHHHHHHHHHCCCe
Confidence 999999877665566764
No 30
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=98.21 E-value=2.8e-06 Score=79.91 Aligned_cols=98 Identities=15% Similarity=0.236 Sum_probs=71.4
Q ss_pred EeeCccHHHHHHHhHh-ccEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeece-----------eeee-CC-ccccccc
Q 013017 309 VKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRES-----------CIFS-DG-TYTKDLT 374 (451)
Q Consensus 309 V~lRPgL~eFL~~Lsk-~YEIvVfTAs~~~YAd~ILd~LDP~~~lf~~rL~Re~-----------C~~~-~g-~yiKDLs 374 (451)
+..+||+.+||+.+.+ .+.++|.|++...+++.+++.++... +|...+.-++ +... ++ .+.+-++
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 162 (219)
T TIGR00338 84 LPLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDA-AFANRLEVEDGKLTGLVEGPIVDASYKGKTLLILLR 162 (219)
T ss_pred CCcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCc-eEeeEEEEECCEEEEEecCcccCCcccHHHHHHHHH
Confidence 5679999999999994 79999999999999999999988765 6665443211 1000 11 3445556
Q ss_pred ccCCCCCcEEEEECChhhhccCCCceeeeccccC
Q 013017 375 VLGVDLAKVAIIDNSPQVFRLQVNNGIPIESWFD 408 (451)
Q Consensus 375 ~LgrdlskvIIIDDsp~~~~~qpeNgIpI~~f~g 408 (451)
.++.+++++++|+|++.-.......|+.+ .|.+
T Consensus 163 ~~~~~~~~~i~iGDs~~Di~aa~~ag~~i-~~~~ 195 (219)
T TIGR00338 163 KEGISPENTVAVGDGANDLSMIKAAGLGI-AFNA 195 (219)
T ss_pred HcCCCHHHEEEEECCHHHHHHHHhCCCeE-EeCC
Confidence 77889999999999987765544556665 3543
No 31
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=98.21 E-value=5.1e-06 Score=84.14 Aligned_cols=123 Identities=15% Similarity=0.176 Sum_probs=85.2
Q ss_pred CCCceEEEEecCcccccccccccCCCCceEEEEecceeeeEEEeeC-ccHHHHHHHhH-hccEEEEEcCCcHHHHHHHHH
Q 013017 267 GRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQR-PHLKTFLERVA-EMFEVVIFTASQSIYAAQLLD 344 (451)
Q Consensus 267 ~~kkktLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~yV~lR-PgL~eFL~~Ls-k~YEIvVfTAs~~~YAd~ILd 344 (451)
...++.+||||||||+.... -|.+| |++.++|++|+ +++.++|+|++.++++..+++
T Consensus 125 ~~~~~~i~~D~D~TL~~~~~---------------------~v~irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le 183 (303)
T PHA03398 125 WEIPHVIVFDLDSTLITDEE---------------------PVRIRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLK 183 (303)
T ss_pred eeeccEEEEecCCCccCCCC---------------------ccccCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHH
Confidence 35567999999999997632 15678 99999999999 579999999999999999999
Q ss_pred HhCCCCCceeEEEeeceeeeeC----------------Ccccccc-----------------cccCCCCCc-EEEEECCh
Q 013017 345 ILDPDGKLISRRVYRESCIFSD----------------GTYTKDL-----------------TVLGVDLAK-VAIIDNSP 390 (451)
Q Consensus 345 ~LDP~~~lf~~rL~Re~C~~~~----------------g~yiKDL-----------------s~Lgrdlsk-vIIIDDsp 390 (451)
.++..+ +|+..+..++..... ..+..|. .+.|..--+ +.+|||-+
T Consensus 184 ~lgL~~-yFDvII~~g~i~~k~~~~~~~d~~~~~~~~~~~f~~d~~~~~~lPKSprvVl~yL~~~gvn~~KtiTLVDDl~ 262 (303)
T PHA03398 184 ETKLEG-YFDIIICGGRKAGEYSRRVIVDNKYKMVFVKKPFYLDVTDVKNLPKSPRVVLWYLRKKGVNYFKTITLVDDLK 262 (303)
T ss_pred HcCCCc-cccEEEECCCcccccccceeecccceeEEecCceeEeCCcccCCCCCCeehHHHHHHcCcceeccEEEeccCc
Confidence 999975 787666655433221 1122222 223443333 45777776
Q ss_pred hhhccCCCceeeeccccCCCCc
Q 013017 391 QVFRLQVNNGIPIESWFDDPSD 412 (451)
Q Consensus 391 ~~~~~qpeNgIpI~~f~gd~~D 412 (451)
.. .+.-+|-+.++..-.-.+|
T Consensus 263 ~N-n~~YD~fv~v~rcp~P~~D 283 (303)
T PHA03398 263 SN-NYSYDYFVNVKRCPEPVND 283 (303)
T ss_pred cc-CccceeEEEeeeCCCCcHH
Confidence 54 4566777777766543333
No 32
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=98.21 E-value=1.2e-06 Score=78.61 Aligned_cols=116 Identities=20% Similarity=0.263 Sum_probs=78.4
Q ss_pred eEEEEecCcccccccccccCCCCceEEEEecceeeeEEEeeCccHHHHHHHhH-hccEEEEEcCCcH-------------
Q 013017 271 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQS------------- 336 (451)
Q Consensus 271 ktLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~yV~lRPgL~eFL~~Ls-k~YEIvVfTAs~~------------- 336 (451)
++|+||+||||+......... ..--+...||+.++|++|+ +.|.++|.|++.+
T Consensus 1 ~~~~~d~dgtl~~~~~~~~~~-------------~~~~~~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~ 67 (147)
T TIGR01656 1 PALFLDRDGVINEDTVSDYPR-------------SLDDWQLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRA 67 (147)
T ss_pred CeEEEeCCCceeccCCcccCC-------------CHHHeEEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHH
Confidence 378999999999875321100 0011356899999999998 7799999999874
Q ss_pred --HHHHHHHHHhCCCCCceeEEEee-----ceeeeeC---CcccccccccCCCCCcEEEEECChhhhccCCCceee
Q 013017 337 --IYAAQLLDILDPDGKLISRRVYR-----ESCIFSD---GTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIP 402 (451)
Q Consensus 337 --~YAd~ILd~LDP~~~lf~~rL~R-----e~C~~~~---g~yiKDLs~LgrdlskvIIIDDsp~~~~~qpeNgIp 402 (451)
.++..+++.++.. +...++. +.....+ ..|.+-+..+|.+++++++|.|++.-.......||.
T Consensus 68 ~~~~~~~~l~~~~l~---~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~ 140 (147)
T TIGR01656 68 PNGRVLELLRQLGVA---VDGVLFCPHHPADNCSCRKPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLA 140 (147)
T ss_pred HHHHHHHHHHhCCCc---eeEEEECCCCCCCCCCCCCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCC
Confidence 5677778887654 2222221 1111112 256677788899999999999998766555455554
No 33
>COG4996 Predicted phosphatase [General function prediction only]
Probab=98.21 E-value=6.1e-06 Score=74.77 Aligned_cols=141 Identities=17% Similarity=0.079 Sum_probs=96.9
Q ss_pred EEEEecCcccccccccccCCCCceEEEEecc--eeeeEEEeeCccHHHHHHHhH-hccEEEEEcCCcHHHHHHHHHHhCC
Q 013017 272 TLVLDLDETLVHSTLEYCDDADFTFTVFFNM--KEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDP 348 (451)
Q Consensus 272 tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~--~~~~~yV~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~YAd~ILd~LDP 348 (451)
.+|||+|+||.....-..-.+.|.. +..+. ...+.-|.++|++.+||+++. .+|-+..+|.....-|-++|..||.
T Consensus 2 ~i~~d~d~t~wdhh~iSsl~pPf~r-Vs~n~i~Ds~G~ev~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLral~~ 80 (164)
T COG4996 2 AIVFDADKTLWDHHNISSLEPPFRR-VSSNTIEDSKGREVHLFPDVKETLKWARNSGYILGLASWNFEDKAIKALRALDL 80 (164)
T ss_pred cEEEeCCCcccccccchhcCCccee-cCccceecCCCeEEEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHHHhch
Confidence 5899999999764321111112211 11111 123456899999999999999 7899999999999999999999999
Q ss_pred CCCceeEEEeeceeeeeCCccccccccc------CCCCCcEEEEECChhhh---ccCCCceeeeccccCCCCchHH
Q 013017 349 DGKLISRRVYRESCIFSDGTYTKDLTVL------GVDLAKVAIIDNSPQVF---RLQVNNGIPIESWFDDPSDCSL 415 (451)
Q Consensus 349 ~~~lf~~rL~Re~C~~~~g~yiKDLs~L------grdlskvIIIDDsp~~~---~~qpeNgIpI~~f~gd~~D~eL 415 (451)
.. ||.+.....|-.. .-...+-|..+ ...|+++|.+||+...+ .....|.=.++.|.+-..=.+.
T Consensus 81 ~~-yFhy~ViePhP~K-~~ML~~llr~i~~er~~~ikP~~Ivy~DDR~iH~~~Iwe~~G~V~~~~~~~Di~c~~ei 154 (164)
T COG4996 81 LQ-YFHYIVIEPHPYK-FLMLSQLLREINTERNQKIKPSEIVYLDDRRIHFGNIWEYLGNVKCLEMWKDISCYSEI 154 (164)
T ss_pred hh-hEEEEEecCCChh-HHHHHHHHHHHHHhhccccCcceEEEEecccccHHHHHHhcCCeeeeEeecchHHHHHH
Confidence 87 9988777555221 11222223322 45789999999999876 3467788888999876433333
No 34
>COG5190 FCP1 TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=98.21 E-value=8.1e-07 Score=92.73 Aligned_cols=136 Identities=30% Similarity=0.463 Sum_probs=101.1
Q ss_pred CCCceEEEEecCcccccccccccCC----------CCceEEEEecceeeeEEEeeCccHHHHHHHhHhccEEEEEcCCcH
Q 013017 267 GRKSVTLVLDLDETLVHSTLEYCDD----------ADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQS 336 (451)
Q Consensus 267 ~~kkktLVLDLDeTLVhSs~~~~~~----------~df~~~v~~~~~~~~~yV~lRPgL~eFL~~Lsk~YEIvVfTAs~~ 336 (451)
..++..||.|+|.|.+|+...+... ........+......++++.||++..|+...++.|++.+||.+.+
T Consensus 23 q~~~~~l~~~~~~~~~h~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~l~~~~~~i~~~~e~~~~~~~~~ 102 (390)
T COG5190 23 QDKKLILVVDLDQTIIHTTVDPNDPNNVNQSLERTLKSVNDRDPVQEKCAYYVKARPKLFPFLTKISPLYELHIYTMGTR 102 (390)
T ss_pred cCcccccccccccceecccccCCCCCchhhhhhccccchhccccccccccceeeecccccchhhhhchhcceeeEeeccc
Confidence 3456789999999999998655110 000011111223446789999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCCceeEEEeeceeeeeCCccccccccc-CCCCCcEEEEECChhhh---ccCCCceeeecc
Q 013017 337 IYAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVL-GVDLAKVAIIDNSPQVF---RLQVNNGIPIES 405 (451)
Q Consensus 337 ~YAd~ILd~LDP~~~lf~~rL~Re~C~~~~g~yiKDLs~L-grdlskvIIIDDsp~~~---~~qpeNgIpI~~ 405 (451)
.||+.+.+++||.|++|..+....+. ..+.-.|-++++ ..+...++++||.+..| ... .|.++..+
T Consensus 103 ~~~~~~~~i~d~~g~~~~d~~~~~~~--~~~~~~~s~~~l~p~~~n~~vi~~d~~~~~~~~d~~-~~~v~~~~ 172 (390)
T COG5190 103 AYAERIAKIIDPTGKLFNDRILSRDE--SGSLSQKSLSRLFPKDQNMVVIIDDRGDVWGVGDMN-SNFVAKSP 172 (390)
T ss_pred cchhhhhhcccccccccccccccccc--cccchhhhhhhcCccccccccccccccccCCccchh-hhhhcccc
Confidence 99999999999999999877763321 233456777766 67889999999999999 333 46666666
No 35
>PLN02940 riboflavin kinase
Probab=98.19 E-value=4e-07 Score=94.68 Aligned_cols=95 Identities=11% Similarity=0.075 Sum_probs=78.3
Q ss_pred EeeCccHHHHHHHhH-hccEEEEEcCCcHHHHHHHHH-HhCCCCCceeEEEeeceeeeeCC---cccccccccCCCCCcE
Q 013017 309 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLD-ILDPDGKLISRRVYRESCIFSDG---TYTKDLTVLGVDLAKV 383 (451)
Q Consensus 309 V~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~YAd~ILd-~LDP~~~lf~~rL~Re~C~~~~g---~yiKDLs~Lgrdlskv 383 (451)
+...||+.++|++|. +.+.++|.|++.+.++..+++ .++... +|+.++..+++...+. .|.+.++.+|..++++
T Consensus 92 ~~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~-~Fd~ii~~d~v~~~KP~p~~~~~a~~~lgv~p~~~ 170 (382)
T PLN02940 92 IKALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKE-SFSVIVGGDEVEKGKPSPDIFLEAAKRLNVEPSNC 170 (382)
T ss_pred CCCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHh-hCCEEEehhhcCCCCCCHHHHHHHHHHcCCChhHE
Confidence 456899999999998 669999999999999999887 566554 8999999888765543 6788889999999999
Q ss_pred EEEECChhhhccCCCceeeec
Q 013017 384 AIIDNSPQVFRLQVNNGIPIE 404 (451)
Q Consensus 384 IIIDDsp~~~~~qpeNgIpI~ 404 (451)
|+|+|++.........|+...
T Consensus 171 l~VGDs~~Di~aA~~aGi~~I 191 (382)
T PLN02940 171 LVIEDSLPGVMAGKAAGMEVI 191 (382)
T ss_pred EEEeCCHHHHHHHHHcCCEEE
Confidence 999999987755555666543
No 36
>PHA02597 30.2 hypothetical protein; Provisional
Probab=98.17 E-value=2.6e-07 Score=85.83 Aligned_cols=96 Identities=13% Similarity=0.113 Sum_probs=69.1
Q ss_pred EeeCccHHHHHHHhHhccEEEEEcCCcHHHHHHHHHHhCCCC---CceeEEEeeceeeeeCCcccccccccCCCCCcEEE
Q 013017 309 VKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDG---KLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAI 385 (451)
Q Consensus 309 V~lRPgL~eFL~~Lsk~YEIvVfTAs~~~YAd~ILd~LDP~~---~lf~~rL~Re~C~~~~g~yiKDLs~LgrdlskvII 385 (451)
+...||+.++|++|++.+.+++.|++.......+++.+...+ .+|+..+..+........|.+.++.+| ++.+|+
T Consensus 73 ~~~~pG~~e~L~~L~~~~~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i~~~~~~~~kp~~~~~a~~~~~--~~~~v~ 150 (197)
T PHA02597 73 LSAYDDALDVINKLKEDYDFVAVTALGDSIDALLNRQFNLNALFPGAFSEVLMCGHDESKEKLFIKAKEKYG--DRVVCF 150 (197)
T ss_pred ccCCCCHHHHHHHHHhcCCEEEEeCCccchhHHHHhhCCHHHhCCCcccEEEEeccCcccHHHHHHHHHHhC--CCcEEE
Confidence 567999999999999778887777776665555666664432 245666665554322335666777888 788999
Q ss_pred EECChhhhccCCCc--eeeeccc
Q 013017 386 IDNSPQVFRLQVNN--GIPIESW 406 (451)
Q Consensus 386 IDDsp~~~~~qpeN--gIpI~~f 406 (451)
|||++........+ ||+..-+
T Consensus 151 vgDs~~di~aA~~a~~Gi~~i~~ 173 (197)
T PHA02597 151 VDDLAHNLDAAHEALSQLPVIHM 173 (197)
T ss_pred eCCCHHHHHHHHHHHcCCcEEEe
Confidence 99999988777677 8876654
No 37
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=98.15 E-value=5.1e-06 Score=76.69 Aligned_cols=123 Identities=15% Similarity=0.128 Sum_probs=88.0
Q ss_pred eEEEEecCcccccccccccCCCCceEEEEecceeeeEEEeeCccHHHHHHHhH-hccEEEEEcCC---------------
Q 013017 271 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTAS--------------- 334 (451)
Q Consensus 271 ktLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~yV~lRPgL~eFL~~Ls-k~YEIvVfTAs--------------- 334 (451)
+.|+||.||||++..... | . . ...-.+..-||+.++|++|. +.|.++|.|+.
T Consensus 2 ~~~~~d~dg~l~~~~~~~-----~--~---~--~~~~~~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~ 69 (161)
T TIGR01261 2 KILFIDRDGTLIEEPPSD-----F--Q---V--DALEKLRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDG 69 (161)
T ss_pred CEEEEeCCCCccccCCCc-----c--c---c--CCHHHeeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHH
Confidence 579999999999843210 0 0 0 00113677899999999999 57999999996
Q ss_pred cHHHHHHHHHHhCCCCCceeEEEee-----ceeeeeCC---cccccccccCCCCCcEEEEECChhhhccCCCceeeeccc
Q 013017 335 QSIYAAQLLDILDPDGKLISRRVYR-----ESCIFSDG---TYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIESW 406 (451)
Q Consensus 335 ~~~YAd~ILd~LDP~~~lf~~rL~R-----e~C~~~~g---~yiKDLs~LgrdlskvIIIDDsp~~~~~qpeNgIpI~~f 406 (451)
...++..+++.++.. |+..++. +.+...++ .+..-++.++.+++++++|.|+..-......+|+....+
T Consensus 70 ~~~~~~~~l~~~gl~---fd~ii~~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i~~ 146 (161)
T TIGR01261 70 PHNLMLQIFRSQGII---FDDVLICPHFPDDNCDCRKPKIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGIQY 146 (161)
T ss_pred HHHHHHHHHHHCCCc---eeEEEECCCCCCCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEEEE
Confidence 467888889988885 7666653 55544433 455666778999999999999987666666677776654
Q ss_pred cC
Q 013017 407 FD 408 (451)
Q Consensus 407 ~g 408 (451)
..
T Consensus 147 ~~ 148 (161)
T TIGR01261 147 DE 148 (161)
T ss_pred Ch
Confidence 43
No 38
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=98.14 E-value=6.3e-06 Score=76.21 Aligned_cols=116 Identities=16% Similarity=0.139 Sum_probs=78.1
Q ss_pred ceEEEEecCcccccccccccCCCCceEEEEecceeeeEEEeeCccHHHHHHHhHh-ccEEEEEcCCcH------------
Q 013017 270 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTASQS------------ 336 (451)
Q Consensus 270 kktLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~yV~lRPgL~eFL~~Lsk-~YEIvVfTAs~~------------ 336 (451)
.+.|+||+||||+-.... +..... .+...||+.++|++|++ .|.++|.|++..
T Consensus 3 ~~~~~~d~~~t~~~~~~~------------~~~~~~--~~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~ 68 (181)
T PRK08942 3 MKAIFLDRDGVINVDSDG------------YVKSPD--EWIPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLN 68 (181)
T ss_pred ccEEEEECCCCcccCCcc------------ccCCHH--HeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHH
Confidence 468999999999654211 000111 24568999999999994 699999998863
Q ss_pred ---HHHHHHHHHhCCCCCceeEEEeece-----eeeeC---CcccccccccCCCCCcEEEEECChhhhccCCCceee
Q 013017 337 ---IYAAQLLDILDPDGKLISRRVYRES-----CIFSD---GTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIP 402 (451)
Q Consensus 337 ---~YAd~ILd~LDP~~~lf~~rL~Re~-----C~~~~---g~yiKDLs~LgrdlskvIIIDDsp~~~~~qpeNgIp 402 (451)
.+...+++.++. +|...++... +...+ ..|.+.+..+|.+++++++|+|++.-.......|+.
T Consensus 69 ~~~~~~~~~l~~~g~---~f~~i~~~~~~~~~~~~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~ 142 (181)
T PRK08942 69 ALHEKMDWSLADRGG---RLDGIYYCPHHPEDGCDCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVT 142 (181)
T ss_pred HHHHHHHHHHHHcCC---ccceEEECCCCCCCCCcCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCe
Confidence 344455555543 3666665432 22223 257788888999999999999999766554455554
No 39
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=98.03 E-value=1.6e-06 Score=77.02 Aligned_cols=81 Identities=11% Similarity=0.048 Sum_probs=65.6
Q ss_pred EeeCccHHHHHHHhH-hccEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeeceeeeeCC---cccccccccCCCCCcEE
Q 013017 309 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG---TYTKDLTVLGVDLAKVA 384 (451)
Q Consensus 309 V~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~YAd~ILd~LDP~~~lf~~rL~Re~C~~~~g---~yiKDLs~LgrdlskvI 384 (451)
....||+.++|+.|. +.+.++|.|++.+.++..+++.+ .. .+|...+..++.. .++ .|.+-+..+|.++ +++
T Consensus 63 ~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~-~~f~~i~~~~~~~-~Kp~~~~~~~~~~~~~~~~-~~l 138 (154)
T TIGR01549 63 EAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LG-DYFDLILGSDEFG-AKPEPEIFLAALESLGLPP-EVL 138 (154)
T ss_pred heeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HH-hcCcEEEecCCCC-CCcCHHHHHHHHHHcCCCC-CEE
Confidence 445699999999997 67999999999999999999996 33 4788777777654 332 5677788889988 999
Q ss_pred EEECChhhh
Q 013017 385 IIDNSPQVF 393 (451)
Q Consensus 385 IIDDsp~~~ 393 (451)
+|.|++.-.
T Consensus 139 ~iGDs~~Di 147 (154)
T TIGR01549 139 HVGDNLNDI 147 (154)
T ss_pred EEeCCHHHH
Confidence 999997543
No 40
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=98.02 E-value=8.8e-06 Score=82.39 Aligned_cols=107 Identities=17% Similarity=0.130 Sum_probs=76.5
Q ss_pred ceEEEEecCcccccccccccCCCCceEEEEecceeeeE-EEeeCccHHHHHHHhH-hccEEEEEcCCcHHHHHHHHHH--
Q 013017 270 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTV-YVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDI-- 345 (451)
Q Consensus 270 kktLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~-yV~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~YAd~ILd~-- 345 (451)
+++||+|||+||..-..-.. ...++ +....|++.++|+.|+ +++.++|.|.+....|..+++.
T Consensus 3 ~k~~v~DlDnTlw~gv~~e~-------------g~~~i~~~~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~ 69 (320)
T TIGR01686 3 LKVLVLDLDNTLWGGVLGED-------------GIDNLNLSPLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRK 69 (320)
T ss_pred eEEEEEcCCCCCCCCEEccC-------------CccccccCccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCc
Confidence 57999999999985431110 00111 1224789999999998 7899999999999999999998
Q ss_pred --hCCCCCceeEEEeeceeeeeC-CcccccccccCCCCCcEEEEECChhhh
Q 013017 346 --LDPDGKLISRRVYRESCIFSD-GTYTKDLTVLGVDLAKVAIIDNSPQVF 393 (451)
Q Consensus 346 --LDP~~~lf~~rL~Re~C~~~~-g~yiKDLs~LgrdlskvIIIDDsp~~~ 393 (451)
+.... +|...... ...+ ..+.+-+..+|.+++.+|+|||++...
T Consensus 70 ~~~~~~~-~f~~~~~~---~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~ 116 (320)
T TIGR01686 70 DFILQAE-DFDARSIN---WGPKSESLRKIAKKLNLGTDSFLFIDDNPAER 116 (320)
T ss_pred cccCcHH-HeeEEEEe---cCchHHHHHHHHHHhCCCcCcEEEECCCHHHH
Confidence 65554 56554222 1112 245566778899999999999999654
No 41
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=98.00 E-value=1.6e-05 Score=74.50 Aligned_cols=118 Identities=17% Similarity=0.206 Sum_probs=64.3
Q ss_pred ceEEEEecCcccccccccccCCCCceEEEEecc----eeeeEEEeeCccHHHHHHHhH-hccEEEEEcC-CcHHHHHHHH
Q 013017 270 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNM----KEHTVYVKQRPHLKTFLERVA-EMFEVVIFTA-SQSIYAAQLL 343 (451)
Q Consensus 270 kktLVLDLDeTLVhSs~~~~~~~df~~~v~~~~----~~~~~yV~lRPgL~eFL~~Ls-k~YEIvVfTA-s~~~YAd~IL 343 (451)
++.+|||||.||...-......+.|.. .-++ ...+.-|.+-|++.+.|+.|. +..+|++.|. ...++|.++|
T Consensus 3 PklvvFDLD~TlW~~~~~~~~~~Pf~~--~~~~~~v~D~~g~~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L 80 (169)
T PF12689_consen 3 PKLVVFDLDYTLWPPWMDTHVGPPFKK--ISNGNVVVDSRGEEVSLYPDVPEILQELKERGVKLAVASRTDEPDWARELL 80 (169)
T ss_dssp -SEEEE-STTTSSSS-TTTSS-S-EEE---TTS--EEETT--EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHH
T ss_pred CcEEEEcCcCCCCchhHhhccCCCcee--cCCCCEEEeCCCCEEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHH
Confidence 468999999999876433222221111 0011 123455889999999999999 6899999995 5688999999
Q ss_pred HHhCCC----------CCceeEEEeeceeeeeCCcccccc-cccCCCCCcEEEEECChhhh
Q 013017 344 DILDPD----------GKLISRRVYRESCIFSDGTYTKDL-TVLGVDLAKVAIIDNSPQVF 393 (451)
Q Consensus 344 d~LDP~----------~~lf~~rL~Re~C~~~~g~yiKDL-s~LgrdlskvIIIDDsp~~~ 393 (451)
+.|+.. . +|++.-.-.. .+...++.| +..|.+.+.++++||.....
T Consensus 81 ~~l~i~~~~~~~~~~~~-~F~~~eI~~g---sK~~Hf~~i~~~tgI~y~eMlFFDDe~~N~ 137 (169)
T PF12689_consen 81 KLLEIDDADGDGVPLIE-YFDYLEIYPG---SKTTHFRRIHRKTGIPYEEMLFFDDESRNI 137 (169)
T ss_dssp HHTT-C----------C-CECEEEESSS----HHHHHHHHHHHH---GGGEEEEES-HHHH
T ss_pred HhcCCCccccccccchh-hcchhheecC---chHHHHHHHHHhcCCChhHEEEecCchhcc
Confidence 999887 3 4443211111 111223333 36699999999999998654
No 42
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=98.00 E-value=6e-06 Score=81.12 Aligned_cols=132 Identities=10% Similarity=-0.016 Sum_probs=78.9
Q ss_pred CCCceEEEEecCccccccccc---ccCCCCc-eEEEEecceee-------eEEEeeCccHHHHHHHhH-hccEEEEEcCC
Q 013017 267 GRKSVTLVLDLDETLVHSTLE---YCDDADF-TFTVFFNMKEH-------TVYVKQRPHLKTFLERVA-EMFEVVIFTAS 334 (451)
Q Consensus 267 ~~kkktLVLDLDeTLVhSs~~---~~~~~df-~~~v~~~~~~~-------~~yV~lRPgL~eFL~~Ls-k~YEIvVfTAs 334 (451)
.++++.++|||||||++|+.. ....... .+....+.... .-.....|++.+||+++. +++.++|.|+.
T Consensus 60 ~~~p~aViFDlDgTLlDSs~~~~~G~~~~s~~~~~~l~g~~~w~~~~~~~~~~s~p~~~a~elL~~l~~~G~~i~iVTnr 139 (237)
T TIGR01672 60 GRPPIAVSFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQRRGDAIFFVTGR 139 (237)
T ss_pred CCCCeEEEEeCCCccccCcHHHhCCcccCCHHHhhhhcChHHHHHHHHhcccCCcchhHHHHHHHHHHHCCCEEEEEeCC
Confidence 445669999999999999852 1110000 00000000000 112334455999999998 67999999998
Q ss_pred ----cHHHHHHHHHHhCCCCCceeEEEeeceeeeeCCcccccccccCCCCCcEEEEECChhhhccCCCceeee
Q 013017 335 ----QSIYAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPI 403 (451)
Q Consensus 335 ----~~~YAd~ILd~LDP~~~lf~~rL~Re~C~~~~g~yiKDLs~LgrdlskvIIIDDsp~~~~~qpeNgIpI 403 (451)
...+++.+++.++..+ +|...+..+.....+..-..-+.. ...+|.|-|+..-+......||..
T Consensus 140 ~~~k~~~~a~~ll~~lGi~~-~f~~i~~~d~~~~~Kp~~~~~l~~----~~i~i~vGDs~~DI~aAk~AGi~~ 207 (237)
T TIGR01672 140 TPGKTDTVSKTLAKNFHIPA-MNPVIFAGDKPGQYQYTKTQWIQD----KNIRIHYGDSDNDITAAKEAGARG 207 (237)
T ss_pred CCCcCHHHHHHHHHHhCCch-heeEEECCCCCCCCCCCHHHHHHh----CCCeEEEeCCHHHHHHHHHCCCCE
Confidence 7789999999998875 776655554432211111111122 233789999987775555556553
No 43
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=97.95 E-value=8.6e-06 Score=80.62 Aligned_cols=128 Identities=11% Similarity=0.074 Sum_probs=93.3
Q ss_pred CCceEEEEecCcccccccccccCCCCceEEEEecceeeeEEEeeCccHHHHHHHhH-hccEEEEEcCCcHHHHHHHHHHh
Q 013017 268 RKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDIL 346 (451)
Q Consensus 268 ~kkktLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~yV~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~YAd~ILd~L 346 (451)
.++..+++|+||||........ .+ +.. ..-....|++.++|+++. +++.++|.|+.....++.+++.|
T Consensus 156 ~~~~~~~~D~dgtl~~~~~~~~--~~------~~~---~~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l 224 (300)
T PHA02530 156 GLPKAVIFDIDGTLAKMGGRSP--YD------WTK---VKEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWL 224 (300)
T ss_pred CCCCEEEEECCCcCcCCCCCCc--cc------hhh---cccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHH
Confidence 3457899999999997643211 01 110 112456999999999998 56999999999999999999999
Q ss_pred CCCCCceeEEEeece-------eeeeCC---cccccccccCC-CCCcEEEEECChhhhccCCCceeeeccc
Q 013017 347 DPDGKLISRRVYRES-------CIFSDG---TYTKDLTVLGV-DLAKVAIIDNSPQVFRLQVNNGIPIESW 406 (451)
Q Consensus 347 DP~~~lf~~rL~Re~-------C~~~~g---~yiKDLs~Lgr-dlskvIIIDDsp~~~~~qpeNgIpI~~f 406 (451)
+..+.+|+..+..+. +...+. .+.+.|..++. +++.++.|||++........+||+....
T Consensus 225 ~~~~~~f~~i~~~~~~~~~~~~~~~~kp~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i~v 295 (300)
T PHA02530 225 RQTDIWFDDLIGRPPDMHFQREQGDKRPDDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLECWQV 295 (300)
T ss_pred HHcCCchhhhhCCcchhhhcccCCCCCCcHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeEEEe
Confidence 988767876666552 111122 34566677777 6799999999999888877888886543
No 44
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=97.94 E-value=3.9e-06 Score=97.60 Aligned_cols=96 Identities=10% Similarity=0.106 Sum_probs=81.0
Q ss_pred eCccHHHHHHHhH-hccEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeeceeeeeCC---cccccccccCCCCCcEEEE
Q 013017 311 QRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG---TYTKDLTVLGVDLAKVAII 386 (451)
Q Consensus 311 lRPgL~eFL~~Ls-k~YEIvVfTAs~~~YAd~ILd~LDP~~~lf~~rL~Re~C~~~~g---~yiKDLs~LgrdlskvIII 386 (451)
..||+.+||++|. +.|.++|.|++...+++.+++.++....+|+..+..+++...+. .|.+.++++|.+++++|+|
T Consensus 162 ~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd~iv~~~~~~~~KP~Pe~~~~a~~~lgv~p~e~v~I 241 (1057)
T PLN02919 162 GFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSADAFENLKPAPDIFLAAAKILGVPTSECVVI 241 (1057)
T ss_pred cCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCCEEEECcccccCCCCHHHHHHHHHHcCcCcccEEEE
Confidence 4799999999998 67999999999999999999999875458999988887765543 6788889999999999999
Q ss_pred ECChhhhccCCCceeeeccc
Q 013017 387 DNSPQVFRLQVNNGIPIESW 406 (451)
Q Consensus 387 DDsp~~~~~qpeNgIpI~~f 406 (451)
+|++.........|+...-.
T Consensus 242 gDs~~Di~AA~~aGm~~I~v 261 (1057)
T PLN02919 242 EDALAGVQAARAAGMRCIAV 261 (1057)
T ss_pred cCCHHHHHHHHHcCCEEEEE
Confidence 99998776666667655543
No 45
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=97.89 E-value=2.5e-06 Score=90.25 Aligned_cols=92 Identities=12% Similarity=0.155 Sum_probs=72.3
Q ss_pred EeeCccHHHHHHHhH-hccEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeeceeee-eC-CcccccccccCCCCCcEEE
Q 013017 309 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIF-SD-GTYTKDLTVLGVDLAKVAI 385 (451)
Q Consensus 309 V~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~YAd~ILd~LDP~~~lf~~rL~Re~C~~-~~-g~yiKDLs~LgrdlskvII 385 (451)
+.+.||+.++|++|+ +.+.++|.|++...++..+++.++... ||+..+..+.... .+ ..|.+-+..++ ++++|+
T Consensus 329 ~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~-~f~~i~~~d~v~~~~kP~~~~~al~~l~--~~~~v~ 405 (459)
T PRK06698 329 GALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQ-WVTETFSIEQINSLNKSDLVKSILNKYD--IKEAAV 405 (459)
T ss_pred CCcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHh-hcceeEecCCCCCCCCcHHHHHHHHhcC--cceEEE
Confidence 567899999999998 679999999999999999999998876 8998888766431 12 24555555554 688999
Q ss_pred EECChhhhccCCCceeee
Q 013017 386 IDNSPQVFRLQVNNGIPI 403 (451)
Q Consensus 386 IDDsp~~~~~qpeNgIpI 403 (451)
|.|++.-+......|+..
T Consensus 406 VGDs~~Di~aAk~AG~~~ 423 (459)
T PRK06698 406 VGDRLSDINAAKDNGLIA 423 (459)
T ss_pred EeCCHHHHHHHHHCCCeE
Confidence 999998776655666654
No 46
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=97.87 E-value=3.7e-05 Score=71.23 Aligned_cols=108 Identities=18% Similarity=0.271 Sum_probs=70.9
Q ss_pred CceEEEEecCcccccccccccCCCCceEEEEecceeeeEEEeeCccHHHHHHHhH-hccEEEEEcCCcHH----------
Q 013017 269 KSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSI---------- 337 (451)
Q Consensus 269 kkktLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~yV~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~---------- 337 (451)
+.++++||+||||+....... + ......| ..+-||+.+.|++|. ++|.++|.|++...
T Consensus 12 ~~k~~~~D~Dgtl~~~~~~~~----~------~~~~~~~-~~~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~ 80 (166)
T TIGR01664 12 QSKVAAFDLDGTLITTRSGKV----F------PTSASDW-RFLYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESF 80 (166)
T ss_pred cCcEEEEeCCCceEecCCCCc----c------cCChHHe-EEecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHH
Confidence 346899999999996532110 0 0000111 124599999999997 78999999998763
Q ss_pred --HHHHHHHHhCCCCCceeEEEeeceeeeeC---CcccccccccC--CCCCcEEEEECCh
Q 013017 338 --YAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLG--VDLAKVAIIDNSP 390 (451)
Q Consensus 338 --YAd~ILd~LDP~~~lf~~rL~Re~C~~~~---g~yiKDLs~Lg--rdlskvIIIDDsp 390 (451)
++..+++.++.. +...+..+.....+ +.+..-+..+| .+++++++|.|++
T Consensus 81 ~~~i~~~l~~~gl~---~~~ii~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~ 137 (166)
T TIGR01664 81 KNKIEAFLEKLKVP---IQVLAATHAGLYRKPMTGMWEYLQSQYNSPIKMTRSFYVGDAA 137 (166)
T ss_pred HHHHHHHHHHcCCC---EEEEEecCCCCCCCCccHHHHHHHHHcCCCCCchhcEEEECCC
Confidence 577888888764 22333333222222 24556667788 8999999999986
No 47
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=97.84 E-value=1.7e-05 Score=69.76 Aligned_cols=94 Identities=18% Similarity=0.309 Sum_probs=78.8
Q ss_pred EEeeCccHHHHHHHhH-hccEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeeceeeeeCC---cccccccccCCCCCcE
Q 013017 308 YVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG---TYTKDLTVLGVDLAKV 383 (451)
Q Consensus 308 yV~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~YAd~ILd~LDP~~~lf~~rL~Re~C~~~~g---~yiKDLs~Lgrdlskv 383 (451)
.....||+.++|+.++ +++.++|.|.+...+++.+++.+.... +|+..++.++....+. .|.+-++.+|.+++++
T Consensus 75 ~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~-~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~p~~~ 153 (176)
T PF13419_consen 75 KLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDD-YFDEIISSDDVGSRKPDPDAYRRALEKLGIPPEEI 153 (176)
T ss_dssp GEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGG-GCSEEEEGGGSSSSTTSHHHHHHHHHHHTSSGGGE
T ss_pred ccchhhhhhhhhhhcccccceeEEeecCCccccccccccccccc-ccccccccchhhhhhhHHHHHHHHHHHcCCCcceE
Confidence 4788999999999999 899999999999999999999998774 8998888876665443 5777788889999999
Q ss_pred EEEECChhhhccCCCceee
Q 013017 384 AIIDNSPQVFRLQVNNGIP 402 (451)
Q Consensus 384 IIIDDsp~~~~~qpeNgIp 402 (451)
++|||++.........|+.
T Consensus 154 ~~vgD~~~d~~~A~~~G~~ 172 (176)
T PF13419_consen 154 LFVGDSPSDVEAAKEAGIK 172 (176)
T ss_dssp EEEESSHHHHHHHHHTTSE
T ss_pred EEEeCCHHHHHHHHHcCCe
Confidence 9999999766544444443
No 48
>PRK06769 hypothetical protein; Validated
Probab=97.82 E-value=2.5e-05 Score=72.41 Aligned_cols=117 Identities=17% Similarity=0.196 Sum_probs=72.7
Q ss_pred ceEEEEecCcccccccccccCCCCceEEEEecceeeeEEEeeCccHHHHHHHhH-hccEEEEEcCCcHHH-----HHHHH
Q 013017 270 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIY-----AAQLL 343 (451)
Q Consensus 270 kktLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~yV~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~Y-----Ad~IL 343 (451)
-..|+||+||||.--. + + .+.-.+.+-||+.++|++|. +.|.++|.|++.... ...++
T Consensus 4 ~~~~~~d~d~~~~~~~--------~---~-----~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~ 67 (173)
T PRK06769 4 IQAIFIDRDGTIGGDT--------T---I-----HYPGSFTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFV 67 (173)
T ss_pred CcEEEEeCCCcccCCC--------C---C-----CCHHHeEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHH
Confidence 3579999999994210 0 0 00011456799999999998 579999999876421 01222
Q ss_pred HHhCCCCCceeEEEe-----eceeeeeC---CcccccccccCCCCCcEEEEECChhhhccCCCceeeec
Q 013017 344 DILDPDGKLISRRVY-----RESCIFSD---GTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIE 404 (451)
Q Consensus 344 d~LDP~~~lf~~rL~-----Re~C~~~~---g~yiKDLs~LgrdlskvIIIDDsp~~~~~qpeNgIpI~ 404 (451)
..+...+ |...++ .+.....+ +.|.+-++++|.+++++++|+|++.-.......|+...
T Consensus 68 ~~l~~~g--~~~~~~~~~~~~~~~~~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i 134 (173)
T PRK06769 68 QELKGFG--FDDIYLCPHKHGDGCECRKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTI 134 (173)
T ss_pred HHHHhCC--cCEEEECcCCCCCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEE
Confidence 3232222 222222 22222223 36778888999999999999999976655545555544
No 49
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=97.75 E-value=1.7e-05 Score=77.20 Aligned_cols=86 Identities=22% Similarity=0.331 Sum_probs=70.5
Q ss_pred EeeCccHHHHHHHhHhccEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeece---------eeeeCCcccccccccCCC
Q 013017 309 VKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRES---------CIFSDGTYTKDLTVLGVD 379 (451)
Q Consensus 309 V~lRPgL~eFL~~Lsk~YEIvVfTAs~~~YAd~ILd~LDP~~~lf~~rL~Re~---------C~~~~g~yiKDLs~Lgrd 379 (451)
++.-|-|+.||-.|.+.+ .++||.+.+..|..+|++|+... .|..+++.+- |.-....|.+..+..|.+
T Consensus 99 LkPD~~LRnlLL~l~~r~-k~~FTNa~k~HA~r~Lk~LGieD-cFegii~~e~~np~~~~~vcKP~~~afE~a~k~agi~ 176 (244)
T KOG3109|consen 99 LKPDPVLRNLLLSLKKRR-KWIFTNAYKVHAIRILKKLGIED-CFEGIICFETLNPIEKTVVCKPSEEAFEKAMKVAGID 176 (244)
T ss_pred cCCCHHHHHHHHhCcccc-EEEecCCcHHHHHHHHHHhChHH-hccceeEeeccCCCCCceeecCCHHHHHHHHHHhCCC
Confidence 666677999999999877 89999999999999999999987 7888887543 222334677888888987
Q ss_pred -CCcEEEEECChhhhccC
Q 013017 380 -LAKVAIIDNSPQVFRLQ 396 (451)
Q Consensus 380 -lskvIIIDDsp~~~~~q 396 (451)
+.+++++||+.......
T Consensus 177 ~p~~t~FfDDS~~NI~~a 194 (244)
T KOG3109|consen 177 SPRNTYFFDDSERNIQTA 194 (244)
T ss_pred CcCceEEEcCchhhHHHH
Confidence 99999999999876443
No 50
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=97.73 E-value=3.2e-05 Score=72.56 Aligned_cols=94 Identities=15% Similarity=0.187 Sum_probs=77.1
Q ss_pred EeeCccHHHHHHHhHh-ccEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeeceeeeeCC---cccccccccCCCCCcEE
Q 013017 309 VKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG---TYTKDLTVLGVDLAKVA 384 (451)
Q Consensus 309 V~lRPgL~eFL~~Lsk-~YEIvVfTAs~~~YAd~ILd~LDP~~~lf~~rL~Re~C~~~~g---~yiKDLs~LgrdlskvI 384 (451)
+.+.||+.+||++|.+ ++.++|.|++...++...++.++... +|+.++..+.....+. .|.+-++++|.+++++|
T Consensus 93 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~-~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~ 171 (221)
T TIGR02253 93 LRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRD-FFDAVITSEEEGVEKPHPKIFYAALKRLGVKPEEAV 171 (221)
T ss_pred CCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHH-hccEEEEeccCCCCCCCHHHHHHHHHHcCCChhhEE
Confidence 6789999999999984 59999999999999999999998876 8998888777654443 67888999999999999
Q ss_pred EEECCh-hhhccCCCceeee
Q 013017 385 IIDNSP-QVFRLQVNNGIPI 403 (451)
Q Consensus 385 IIDDsp-~~~~~qpeNgIpI 403 (451)
+|+|++ .-.......|+..
T Consensus 172 ~igDs~~~di~~A~~aG~~~ 191 (221)
T TIGR02253 172 MVGDRLDKDIKGAKNLGMKT 191 (221)
T ss_pred EECCChHHHHHHHHHCCCEE
Confidence 999998 4554444455543
No 51
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=97.73 E-value=3.9e-05 Score=69.23 Aligned_cols=92 Identities=20% Similarity=0.256 Sum_probs=73.5
Q ss_pred EeeCccHHHHHHHhH-hccEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeeceeeeeC---CcccccccccCCCCCcEE
Q 013017 309 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGVDLAKVA 384 (451)
Q Consensus 309 V~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~YAd~ILd~LDP~~~lf~~rL~Re~C~~~~---g~yiKDLs~LgrdlskvI 384 (451)
+...||+.+||++++ +.|.++|.|++...+ ..++..++..+ +|+..++.+.....+ ..|.+-++.+|.+++++|
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~-~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~ 161 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRD-LFDVVIFSGDVGRGKPDPDIYLLALKKLGLKPEECL 161 (183)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHH-HCCEEEEcCCCCCCCCCHHHHHHHHHHcCCCcceEE
Confidence 467899999999998 579999999999999 77776677765 799888876655444 357777888999999999
Q ss_pred EEECChhhhccCCCceee
Q 013017 385 IIDNSPQVFRLQVNNGIP 402 (451)
Q Consensus 385 IIDDsp~~~~~qpeNgIp 402 (451)
+|+|++.........|+.
T Consensus 162 ~vgD~~~di~aA~~~G~~ 179 (183)
T TIGR01509 162 FVDDSPAGIEAAKAAGMH 179 (183)
T ss_pred EEcCCHHHHHHHHHcCCE
Confidence 999999766554445553
No 52
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=97.72 E-value=2.5e-05 Score=74.74 Aligned_cols=93 Identities=17% Similarity=0.155 Sum_probs=75.1
Q ss_pred EeeCccHHHHHHHhH-hccEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeeceeeeeCC---cccccccccCCCCCcEE
Q 013017 309 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG---TYTKDLTVLGVDLAKVA 384 (451)
Q Consensus 309 V~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~YAd~ILd~LDP~~~lf~~rL~Re~C~~~~g---~yiKDLs~LgrdlskvI 384 (451)
...-||+.+.|..++ ++|.++|.|+.....++.+++.++... ||+.++..+.....++ .+..-+..+|.+++++|
T Consensus 88 ~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~-~F~~i~g~~~~~~~KP~P~~l~~~~~~~~~~~~~~l 166 (220)
T COG0546 88 SRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLAD-YFDVIVGGDDVPPPKPDPEPLLLLLEKLGLDPEEAL 166 (220)
T ss_pred CccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCcc-ccceEEcCCCCCCCCcCHHHHHHHHHHhCCChhheE
Confidence 467899999999999 779999999999999999999999887 8887777444444443 34566778888878999
Q ss_pred EEECChhhhccCCCceee
Q 013017 385 IIDNSPQVFRLQVNNGIP 402 (451)
Q Consensus 385 IIDDsp~~~~~qpeNgIp 402 (451)
+|=|+..-.......|++
T Consensus 167 ~VGDs~~Di~aA~~Ag~~ 184 (220)
T COG0546 167 MVGDSLNDILAAKAAGVP 184 (220)
T ss_pred EECCCHHHHHHHHHcCCC
Confidence 999999877665556655
No 53
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=97.67 E-value=4.7e-05 Score=70.93 Aligned_cols=97 Identities=15% Similarity=0.122 Sum_probs=79.2
Q ss_pred EeeCccHHHHHHHhH-hccEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeeceeeeeCC---cccccccccCCCCCcEE
Q 013017 309 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG---TYTKDLTVLGVDLAKVA 384 (451)
Q Consensus 309 V~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~YAd~ILd~LDP~~~lf~~rL~Re~C~~~~g---~yiKDLs~LgrdlskvI 384 (451)
+.++||+.++|+.+. +++.++|.|++...+++.+++.++..+ +|+..+..+.....++ .|.+-++.+|.++++++
T Consensus 84 ~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~-~f~~~~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~ 162 (213)
T TIGR01449 84 TSVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAK-YFSVLIGGDSLAQRKPHPDPLLLAAERLGVAPQQMV 162 (213)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHh-hCcEEEecCCCCCCCCChHHHHHHHHHcCCChhHeE
Confidence 578999999999998 679999999999999999999998876 7887776665443333 57788899999999999
Q ss_pred EEECChhhhccCCCceeeeccc
Q 013017 385 IIDNSPQVFRLQVNNGIPIESW 406 (451)
Q Consensus 385 IIDDsp~~~~~qpeNgIpI~~f 406 (451)
+|+|++.-.......|++....
T Consensus 163 ~igDs~~d~~aa~~aG~~~i~v 184 (213)
T TIGR01449 163 YVGDSRVDIQAARAAGCPSVLL 184 (213)
T ss_pred EeCCCHHHHHHHHHCCCeEEEE
Confidence 9999998776655667665433
No 54
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=97.66 E-value=5.9e-05 Score=70.50 Aligned_cols=96 Identities=15% Similarity=0.138 Sum_probs=80.0
Q ss_pred EeeCccHHHHHHHhH-hccEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeeceeeeeC---CcccccccccCCCCCcEE
Q 013017 309 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGVDLAKVA 384 (451)
Q Consensus 309 V~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~YAd~ILd~LDP~~~lf~~rL~Re~C~~~~---g~yiKDLs~LgrdlskvI 384 (451)
+...||+.++|++|. +.+.++|.|.+...++..+++.++..+ +|+..+..+++...+ ..|.+-+..+|.++++++
T Consensus 74 ~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~-~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~l 152 (205)
T TIGR01454 74 VEVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLP-LFDHVIGSDEVPRPKPAPDIVREALRLLDVPPEDAV 152 (205)
T ss_pred cccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChh-heeeEEecCcCCCCCCChHHHHHHHHHcCCChhheE
Confidence 667899999999998 679999999999999999999999876 899888777654333 256777888999999999
Q ss_pred EEECChhhhccCCCceeeecc
Q 013017 385 IIDNSPQVFRLQVNNGIPIES 405 (451)
Q Consensus 385 IIDDsp~~~~~qpeNgIpI~~ 405 (451)
+|+|++.-.......|++...
T Consensus 153 ~igD~~~Di~aA~~~Gi~~i~ 173 (205)
T TIGR01454 153 MVGDAVTDLASARAAGTATVA 173 (205)
T ss_pred EEcCCHHHHHHHHHcCCeEEE
Confidence 999999877666677877543
No 55
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=97.63 E-value=4.8e-05 Score=69.07 Aligned_cols=86 Identities=10% Similarity=0.182 Sum_probs=60.8
Q ss_pred EeeCccHHHHHHHhH-hccEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeeceeeeeCC-----------------ccc
Q 013017 309 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG-----------------TYT 370 (451)
Q Consensus 309 V~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~YAd~ILd~LDP~~~lf~~rL~Re~C~~~~g-----------------~yi 370 (451)
+.++||+.++|+++. +.+.++|.|++...+++.+++.++... +|...+..+...-..| ...
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~-~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~ 149 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKD-VFIEIYSNPASFDNDGRHIVWPHHCHGCCSCPCGCC 149 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChh-heeEEeccCceECCCCcEEEecCCCCccCcCCCCCC
Confidence 678999999999998 569999999999999999999987654 7877665332211111 111
Q ss_pred c--cccccCCC-CCcEEEEECChhhhcc
Q 013017 371 K--DLTVLGVD-LAKVAIIDNSPQVFRL 395 (451)
Q Consensus 371 K--DLs~Lgrd-lskvIIIDDsp~~~~~ 395 (451)
| -+..+... ++++|+|+|+..-...
T Consensus 150 K~~~~~~~~~~~~~~~i~iGD~~~D~~a 177 (188)
T TIGR01489 150 KGKVIHKLSEPKYQHIIYIGDGVTDVCP 177 (188)
T ss_pred HHHHHHHHHhhcCceEEEECCCcchhch
Confidence 2 22233333 7889999999876544
No 56
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=97.61 E-value=6.8e-05 Score=69.59 Aligned_cols=94 Identities=15% Similarity=0.187 Sum_probs=77.3
Q ss_pred EeeCccHHHHHHHhHh-ccEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeeceeeeeCC---cccccccccCCCCCcEE
Q 013017 309 VKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG---TYTKDLTVLGVDLAKVA 384 (451)
Q Consensus 309 V~lRPgL~eFL~~Lsk-~YEIvVfTAs~~~YAd~ILd~LDP~~~lf~~rL~Re~C~~~~g---~yiKDLs~LgrdlskvI 384 (451)
+...||+.++|++|++ +|.++|.|++...++..+++.++... +|+..+..++....+. .|.+-++.+|.++++++
T Consensus 91 ~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~-~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p~~~~ 169 (198)
T TIGR01428 91 LPPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDD-PFDAVLSADAVRAYKPAPQVYQLALEALGVPPDEVL 169 (198)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChh-hhheeEehhhcCCCCCCHHHHHHHHHHhCCChhhEE
Confidence 5568999999999996 59999999999999999999998654 8998888777654443 57788889999999999
Q ss_pred EEECChhhhccCCCceeee
Q 013017 385 IIDNSPQVFRLQVNNGIPI 403 (451)
Q Consensus 385 IIDDsp~~~~~qpeNgIpI 403 (451)
+|+|++.-.......|+..
T Consensus 170 ~vgD~~~Di~~A~~~G~~~ 188 (198)
T TIGR01428 170 FVASNPWDLGGAKKFGFKT 188 (198)
T ss_pred EEeCCHHHHHHHHHCCCcE
Confidence 9999996665555566553
No 57
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=97.60 E-value=0.00018 Score=74.67 Aligned_cols=121 Identities=17% Similarity=0.164 Sum_probs=82.4
Q ss_pred CceEEEEecCcccccccccccCCCCceEEEEecceeeeEEEeeCccHHHHHHHhH-hccEEEEEcCC-------------
Q 013017 269 KSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTAS------------- 334 (451)
Q Consensus 269 kkktLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~yV~lRPgL~eFL~~Ls-k~YEIvVfTAs------------- 334 (451)
+++.|+||-||||+........ ......+.+.||+.++|++|. +.|.++|.|+.
T Consensus 1 ~~k~l~lDrDgtl~~~~~~~y~------------~~~~~~~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l 68 (354)
T PRK05446 1 MQKILFIDRDGTLIEEPPTDFQ------------VDSLDKLAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDF 68 (354)
T ss_pred CCcEEEEeCCCCccCCCCcccc------------ccCcccceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHH
Confidence 3679999999999986421100 011223778999999999998 57999999995
Q ss_pred --cHHHHHHHHHHhCCCCCceeEEEee-----ceeeeeCC---cccccccccCCCCCcEEEEECChhhhccCCCceeeec
Q 013017 335 --QSIYAAQLLDILDPDGKLISRRVYR-----ESCIFSDG---TYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIE 404 (451)
Q Consensus 335 --~~~YAd~ILd~LDP~~~lf~~rL~R-----e~C~~~~g---~yiKDLs~LgrdlskvIIIDDsp~~~~~qpeNgIpI~ 404 (451)
...++..+++.++. +|...++. +.|...+. .+..-+..++.+++++++|-|+..-......+|+...
T Consensus 69 ~~~~~~i~~iL~~~gl---~fd~i~i~~~~~sd~~~~rKP~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I 145 (354)
T PRK05446 69 DPPHNLMMQIFESQGI---KFDEVLICPHFPEDNCSCRKPKTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGI 145 (354)
T ss_pred hhHHHHHHHHHHHcCC---ceeeEEEeCCcCcccCCCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEE
Confidence 35566666776655 36555554 44444333 3344456678899999999999866655556666643
No 58
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=97.59 E-value=6.2e-05 Score=70.38 Aligned_cols=94 Identities=14% Similarity=0.096 Sum_probs=77.7
Q ss_pred EeeCccHHHHHHHhHhccEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeeceeeeeCC---ccccccccc-CCCCCcEE
Q 013017 309 VKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG---TYTKDLTVL-GVDLAKVA 384 (451)
Q Consensus 309 V~lRPgL~eFL~~Lsk~YEIvVfTAs~~~YAd~ILd~LDP~~~lf~~rL~Re~C~~~~g---~yiKDLs~L-grdlskvI 384 (451)
+.++||+.++|+++++.+.++|-|++...+++.+++.++..+ +|+..+..+.+...+. .|.+-++++ |.+++++|
T Consensus 96 ~~~~~g~~~~L~~l~~~~~~~i~Sn~~~~~~~~~l~~~~l~~-~fd~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~v 174 (224)
T TIGR02254 96 HQLLPGAFELMENLQQKFRLYIVTNGVRETQYKRLRKSGLFP-FFDDIFVSEDAGIQKPDKEIFNYALERMPKFSKEEVL 174 (224)
T ss_pred CeeCccHHHHHHHHHhcCcEEEEeCCchHHHHHHHHHCCcHh-hcCEEEEcCccCCCCCCHHHHHHHHHHhcCCCchheE
Confidence 578999999999999669999999999999999999998876 8998888777655443 577888999 99999999
Q ss_pred EEECCh-hhhccCCCceeee
Q 013017 385 IIDNSP-QVFRLQVNNGIPI 403 (451)
Q Consensus 385 IIDDsp-~~~~~qpeNgIpI 403 (451)
+|+|++ ........+|++.
T Consensus 175 ~igD~~~~di~~A~~~G~~~ 194 (224)
T TIGR02254 175 MIGDSLTADIKGGQNAGLDT 194 (224)
T ss_pred EECCCcHHHHHHHHHCCCcE
Confidence 999997 4554444566544
No 59
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=97.57 E-value=0.00039 Score=70.15 Aligned_cols=72 Identities=19% Similarity=0.274 Sum_probs=58.7
Q ss_pred CCceEEEEecCcccccccccccCCCCceEEEEecceeeeEEEee-CccHHHHHHHhHhc-cEEEEEcCCcHHHHHHHHHH
Q 013017 268 RKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQ-RPHLKTFLERVAEM-FEVVIFTASQSIYAAQLLDI 345 (451)
Q Consensus 268 ~kkktLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~yV~l-RPgL~eFL~~Lsk~-YEIvVfTAs~~~YAd~ILd~ 345 (451)
..+-.+|||||.|||..... +.+ -|.+.+.|..+++. .-+++||.|.++++...++.
T Consensus 120 ~~phVIVfDlD~TLItd~~~---------------------v~Ir~~~v~~sL~~Lk~~g~vLvLWSyG~~eHV~~sl~~ 178 (297)
T PF05152_consen 120 EPPHVIVFDLDSTLITDEGD---------------------VRIRDPAVYDSLRELKEQGCVLVLWSYGNREHVRHSLKE 178 (297)
T ss_pred CCCcEEEEECCCcccccCCc---------------------cccCChHHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHH
Confidence 34458999999999976432 222 48899999999955 59999999999999999999
Q ss_pred hCCCCCceeEEEeece
Q 013017 346 LDPDGKLISRRVYRES 361 (451)
Q Consensus 346 LDP~~~lf~~rL~Re~ 361 (451)
++..+ +|+.+|.+..
T Consensus 179 ~~L~~-~Fd~ii~~G~ 193 (297)
T PF05152_consen 179 LKLEG-YFDIIICGGN 193 (297)
T ss_pred hCCcc-ccEEEEeCCc
Confidence 99885 8998888543
No 60
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=97.57 E-value=0.0001 Score=68.10 Aligned_cols=108 Identities=17% Similarity=0.138 Sum_probs=76.0
Q ss_pred CCceEEEEecCcccccccccccCCCCceEEEEecceeeeEEEeeCccHHHHHHHhH-hccEEEEEcCCc-HHHHHHHHHH
Q 013017 268 RKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQ-SIYAAQLLDI 345 (451)
Q Consensus 268 ~kkktLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~yV~lRPgL~eFL~~Ls-k~YEIvVfTAs~-~~YAd~ILd~ 345 (451)
.+-..||+|+||||..... ...-||+.++|++|. +.+.++|.|++. ...+..+++.
T Consensus 23 ~~v~~vv~D~Dgtl~~~~~----------------------~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~ 80 (170)
T TIGR01668 23 VGIKGVVLDKDNTLVYPDH----------------------NEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKA 80 (170)
T ss_pred CCCCEEEEecCCccccCCC----------------------CCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHH
Confidence 4456899999999985421 134699999999998 559999999998 6888888887
Q ss_pred hCCCCCceeEEEeeceeeeeCCcccccccccCCCCCcEEEEECChh-hhccCCCceeeec
Q 013017 346 LDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQ-VFRLQVNNGIPIE 404 (451)
Q Consensus 346 LDP~~~lf~~rL~Re~C~~~~g~yiKDLs~LgrdlskvIIIDDsp~-~~~~qpeNgIpI~ 404 (451)
++... ++ ....-....|.+-++.+|.+++++++|+|+.. -......+|+...
T Consensus 81 ~gl~~------~~-~~~KP~p~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~~i 133 (170)
T TIGR01668 81 LGIPV------LP-HAVKPPGCAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSYTI 133 (170)
T ss_pred cCCEE------Ec-CCCCCChHHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCeEE
Confidence 75431 11 11111223566777888999999999999983 4444444555443
No 61
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=97.55 E-value=2e-05 Score=73.24 Aligned_cols=94 Identities=18% Similarity=0.158 Sum_probs=63.3
Q ss_pred EeeCccHHHHHHHhHhccEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEee-ceeee-----eCC-cccccccccCCCCC
Q 013017 309 VKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYR-ESCIF-----SDG-TYTKDLTVLGVDLA 381 (451)
Q Consensus 309 V~lRPgL~eFL~~Lsk~YEIvVfTAs~~~YAd~ILd~LDP~~~lf~~rL~R-e~C~~-----~~g-~yiKDLs~Lgrdls 381 (451)
+..+||+.+||+.+.+.+.++|.|++...+++.+++.++... +|...+.- +.-.. ..+ ....-+..++....
T Consensus 67 ~~~~pg~~e~L~~L~~~~~~~IvS~~~~~~~~~~l~~~gl~~-~f~~~~~~~~~~~i~~~~~~~p~~k~~~l~~~~~~~~ 145 (205)
T PRK13582 67 LDPLPGAVEFLDWLRERFQVVILSDTFYEFAGPLMRQLGWPT-LFCHSLEVDEDGMITGYDLRQPDGKRQAVKALKSLGY 145 (205)
T ss_pred CCCCCCHHHHHHHHHhcCCEEEEeCCcHHHHHHHHHHcCCch-hhcceEEECCCCeEECccccccchHHHHHHHHHHhCC
Confidence 566899999999999669999999999999999999998764 66554432 11100 011 11122233445567
Q ss_pred cEEEEECChhhhccCCCceeee
Q 013017 382 KVAIIDNSPQVFRLQVNNGIPI 403 (451)
Q Consensus 382 kvIIIDDsp~~~~~qpeNgIpI 403 (451)
.++.|.|+..-.......|+.+
T Consensus 146 ~~v~iGDs~~D~~~~~aa~~~v 167 (205)
T PRK13582 146 RVIAAGDSYNDTTMLGEADAGI 167 (205)
T ss_pred eEEEEeCCHHHHHHHHhCCCCE
Confidence 8999999997654443344444
No 62
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=97.54 E-value=0.0001 Score=69.92 Aligned_cols=100 Identities=14% Similarity=0.078 Sum_probs=83.1
Q ss_pred EeeCccHHHHHHHhH-hccEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeeceeeeeCC---cccccccccCCCCCcEE
Q 013017 309 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG---TYTKDLTVLGVDLAKVA 384 (451)
Q Consensus 309 V~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~YAd~ILd~LDP~~~lf~~rL~Re~C~~~~g---~yiKDLs~LgrdlskvI 384 (451)
+.+.||+.++|++++ ++|.++|.|++...+++.+++.++..+ +|+..+.++.....++ .|..-+..+|.++++++
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~-~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~ 169 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRD-YFDALASAEKLPYSKPHPEVYLNCAAKLGVDPLTCV 169 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchh-cccEEEEcccCCCCCCCHHHHHHHHHHcCCCHHHeE
Confidence 467899999999998 679999999999999999999998776 8988888776544433 67788889999999999
Q ss_pred EEECChhhhccCCCceeeeccccCC
Q 013017 385 IIDNSPQVFRLQVNNGIPIESWFDD 409 (451)
Q Consensus 385 IIDDsp~~~~~qpeNgIpI~~f~gd 409 (451)
+|+|++.-.......|++..-+...
T Consensus 170 ~igDs~~Di~aA~~aG~~~i~v~~~ 194 (222)
T PRK10826 170 ALEDSFNGMIAAKAARMRSIVVPAP 194 (222)
T ss_pred EEcCChhhHHHHHHcCCEEEEecCC
Confidence 9999998887766778776555443
No 63
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=97.54 E-value=0.00022 Score=70.20 Aligned_cols=130 Identities=12% Similarity=0.114 Sum_probs=75.9
Q ss_pred CCCceEEEEecCcccccccccc-cCCCCce--EEEEecc--------eeeeEEEeeCccHHHHHHHhH-hccEEEEEcC-
Q 013017 267 GRKSVTLVLDLDETLVHSTLEY-CDDADFT--FTVFFNM--------KEHTVYVKQRPHLKTFLERVA-EMFEVVIFTA- 333 (451)
Q Consensus 267 ~~kkktLVLDLDeTLVhSs~~~-~~~~df~--~~v~~~~--------~~~~~yV~lRPgL~eFL~~Ls-k~YEIvVfTA- 333 (451)
.++++.++||+|||+++++... .....|. ..-+++. .....+....||+.+||+++. +.++|++-|+
T Consensus 60 ~~~p~av~~DIDeTvldnsp~~~~~~~~f~~~~~~y~~~~~fw~~y~~~~~~~a~p~~Ga~elL~~L~~~G~~I~iVTnR 139 (237)
T PRK11009 60 GRPPMAVGFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQKFWEKMNNGWDEFSIPKEVARQLIDMHVKRGDSIYFITGR 139 (237)
T ss_pred CCCCcEEEEECcCccccCCchheeeeeccCCCcccccChHHHHHHHHhcccccCcchHHHHHHHHHHHHCCCeEEEEeCC
Confidence 4556799999999999975311 1111110 0000000 001234555666999999995 8899999998
Q ss_pred ---CcHHHHHHHHHHhCC-CCCceeEEEeeceeeeeCCcccccccccCCCCCcEEEEECChhhhccCCCceee
Q 013017 334 ---SQSIYAAQLLDILDP-DGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIP 402 (451)
Q Consensus 334 ---s~~~YAd~ILd~LDP-~~~lf~~rL~Re~C~~~~g~yiKDLs~LgrdlskvIIIDDsp~~~~~qpeNgIp 402 (451)
....+++.+++.++. ...+|...+..+.. .+..-..-+.. ..-+|+|-|+..-+......||.
T Consensus 140 ~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~~--~K~~K~~~l~~----~~i~I~IGDs~~Di~aA~~AGi~ 206 (237)
T PRK11009 140 TATKTETVSKTLADDFHIPADNMNPVIFAGDKP--GQYTKTQWLKK----KNIRIFYGDSDNDITAAREAGAR 206 (237)
T ss_pred CCcccHHHHHHHHHHcCCCcccceeEEEcCCCC--CCCCHHHHHHh----cCCeEEEcCCHHHHHHHHHcCCc
Confidence 457799999987776 23377655554431 11111111222 22389999998766554445554
No 64
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=97.48 E-value=9.6e-05 Score=69.11 Aligned_cols=100 Identities=13% Similarity=0.140 Sum_probs=78.5
Q ss_pred EeeCccHHHHHHHhH-hccEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeeceeeeeCC---cccccccccCCCCCcEE
Q 013017 309 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG---TYTKDLTVLGVDLAKVA 384 (451)
Q Consensus 309 V~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~YAd~ILd~LDP~~~lf~~rL~Re~C~~~~g---~yiKDLs~LgrdlskvI 384 (451)
...+||+.++|++++ ++|.++|.|++....+..++.....-..+|+..++.+++...++ .|.+-++.+|.++++++
T Consensus 83 ~~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~~~~p~~~l 162 (199)
T PRK09456 83 VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQDLGMRKPEARIYQHVLQAEGFSAADAV 162 (199)
T ss_pred hccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEecccCCCCCCHHHHHHHHHHcCCChhHeE
Confidence 457899999999998 67999999999988777665442212347888888777766544 57888899999999999
Q ss_pred EEECChhhhccCCCceeeeccccC
Q 013017 385 IIDNSPQVFRLQVNNGIPIESWFD 408 (451)
Q Consensus 385 IIDDsp~~~~~qpeNgIpI~~f~g 408 (451)
+|||++.........|+...-+.+
T Consensus 163 ~vgD~~~di~aA~~aG~~~i~~~~ 186 (199)
T PRK09456 163 FFDDNADNIEAANALGITSILVTD 186 (199)
T ss_pred EeCCCHHHHHHHHHcCCEEEEecC
Confidence 999999887666677887765544
No 65
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=97.46 E-value=8.3e-05 Score=67.62 Aligned_cols=92 Identities=16% Similarity=0.194 Sum_probs=74.6
Q ss_pred EeeCccHHHHHHHhH-hccEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeeceeeeeCC---cccccccccCCCCCcEE
Q 013017 309 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG---TYTKDLTVLGVDLAKVA 384 (451)
Q Consensus 309 V~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~YAd~ILd~LDP~~~lf~~rL~Re~C~~~~g---~yiKDLs~LgrdlskvI 384 (451)
+...||+.++|+.|. +.+.++|.|++ .+++.+++.++..+ +|+.++..+.....+. .|.+-++.+|..++++|
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~-~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v 163 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTD-YFDAIVDADEVKEGKPHPETFLLAAELLGVSPNECV 163 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHH-HCCEeeehhhCCCCCCChHHHHHHHHHcCCCHHHeE
Confidence 568999999999998 56999999988 78999999988765 8988887766544433 56777888999999999
Q ss_pred EEECChhhhccCCCceeee
Q 013017 385 IIDNSPQVFRLQVNNGIPI 403 (451)
Q Consensus 385 IIDDsp~~~~~qpeNgIpI 403 (451)
+|+|++........+|++.
T Consensus 164 ~IgD~~~di~aA~~~G~~~ 182 (185)
T TIGR02009 164 VFEDALAGVQAARAAGMFA 182 (185)
T ss_pred EEeCcHhhHHHHHHCCCeE
Confidence 9999998776665666653
No 66
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=97.46 E-value=0.00016 Score=65.86 Aligned_cols=111 Identities=19% Similarity=0.183 Sum_probs=75.4
Q ss_pred eEEEEecCcccccccccccCCCCceEEEEecceeeeEEEeeCccHHHHHHHhH-hccEEEEEcCCcHHHHHHHHHHhCCC
Q 013017 271 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPD 349 (451)
Q Consensus 271 ktLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~yV~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~YAd~ILd~LDP~ 349 (451)
+.++||+||||+.-..... .+ ....-++.++|+. -|++|+ +++.++|.|+.....+..+++.+...
T Consensus 2 ~~~~~D~Dgtl~~~~~~~~----------~~-~~~~~~~~~~~~~--~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~ 68 (154)
T TIGR01670 2 RLLILDVDGVLTDGKIYYT----------NN-GEEIKAFNVRDGY--GIRCALKSGIEVAIITGRKAKLVEDRCKTLGIT 68 (154)
T ss_pred eEEEEeCceeEEcCeEEEC----------CC-CcEEEEEechhHH--HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCC
Confidence 4789999999995321100 11 1112224567776 688888 57999999999999999999999876
Q ss_pred CCceeEEEeeceeeeeCC-cccccccccCCCCCcEEEEECChhhhccCCCceee
Q 013017 350 GKLISRRVYRESCIFSDG-TYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIP 402 (451)
Q Consensus 350 ~~lf~~rL~Re~C~~~~g-~yiKDLs~LgrdlskvIIIDDsp~~~~~qpeNgIp 402 (451)
. +|... ..+. .+.+-+..+|.++++++.|-|+..-...-...|+.
T Consensus 69 ~-~~~~~-------~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~ 114 (154)
T TIGR01670 69 H-LYQGQ-------SNKLIAFSDILEKLALAPENVAYIGDDLIDWPVMEKVGLS 114 (154)
T ss_pred E-EEecc-------cchHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCe
Confidence 4 55421 1222 34455577888999999999998766554444444
No 67
>PRK09449 dUMP phosphatase; Provisional
Probab=97.44 E-value=0.00014 Score=68.61 Aligned_cols=93 Identities=15% Similarity=0.145 Sum_probs=75.4
Q ss_pred EeeCccHHHHHHHhHhccEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeeceeeeeCC---cccccccccCC-CCCcEE
Q 013017 309 VKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG---TYTKDLTVLGV-DLAKVA 384 (451)
Q Consensus 309 V~lRPgL~eFL~~Lsk~YEIvVfTAs~~~YAd~ILd~LDP~~~lf~~rL~Re~C~~~~g---~yiKDLs~Lgr-dlskvI 384 (451)
+...||+.++|++|.+.|.++|.|++...+++.+++.++..+ +|+..+..+++...++ .|.+-++.+|. +++.++
T Consensus 94 ~~~~~g~~~~L~~L~~~~~~~i~Tn~~~~~~~~~l~~~~l~~-~fd~v~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~ 172 (224)
T PRK09449 94 CTPLPGAVELLNALRGKVKMGIITNGFTELQQVRLERTGLRD-YFDLLVISEQVGVAKPDVAIFDYALEQMGNPDRSRVL 172 (224)
T ss_pred CccCccHHHHHHHHHhCCeEEEEeCCcHHHHHHHHHhCChHH-HcCEEEEECccCCCCCCHHHHHHHHHHcCCCCcccEE
Confidence 467899999999999889999999999999999999988876 8999988887655543 57788899986 457899
Q ss_pred EEECChh-hhccCCCceee
Q 013017 385 IIDNSPQ-VFRLQVNNGIP 402 (451)
Q Consensus 385 IIDDsp~-~~~~qpeNgIp 402 (451)
+|+|++. ........|+.
T Consensus 173 ~vgD~~~~Di~~A~~aG~~ 191 (224)
T PRK09449 173 MVGDNLHSDILGGINAGID 191 (224)
T ss_pred EEcCCcHHHHHHHHHCCCc
Confidence 9999973 44444445543
No 68
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=97.40 E-value=0.00019 Score=69.43 Aligned_cols=97 Identities=12% Similarity=0.040 Sum_probs=79.5
Q ss_pred EeeCccHHHHHHHhH-hccEEEEEcCCcHHHHHHHHHHhCCCCCc-eeEEEeeceeeeeCC---cccccccccCC-CCCc
Q 013017 309 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKL-ISRRVYRESCIFSDG---TYTKDLTVLGV-DLAK 382 (451)
Q Consensus 309 V~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~YAd~ILd~LDP~~~l-f~~rL~Re~C~~~~g---~yiKDLs~Lgr-dlsk 382 (451)
+.+.||+.++|++|+ +.+.++|.|++.+.+++.+++.++..+ + |+.++..+.....++ .|.+-+.++|. ++++
T Consensus 98 ~~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~-~f~d~ii~~~~~~~~KP~p~~~~~a~~~l~~~~~~~ 176 (253)
T TIGR01422 98 SSPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQG-YRPDYNVTTDDVPAGRPAPWMALKNAIELGVYDVAA 176 (253)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcC-CCCceEEccccCCCCCCCHHHHHHHHHHcCCCCchh
Confidence 467899999999998 579999999999999999999998876 5 477777776544443 67888899998 4999
Q ss_pred EEEEECChhhhccCCCceeeeccc
Q 013017 383 VAIIDNSPQVFRLQVNNGIPIESW 406 (451)
Q Consensus 383 vIIIDDsp~~~~~qpeNgIpI~~f 406 (451)
+|+|.|++.-.......|+.....
T Consensus 177 ~l~IGDs~~Di~aA~~aGi~~i~v 200 (253)
T TIGR01422 177 CVKVGDTVPDIEEGRNAGMWTVGL 200 (253)
T ss_pred eEEECCcHHHHHHHHHCCCeEEEE
Confidence 999999998777666677765554
No 69
>PLN02954 phosphoserine phosphatase
Probab=97.38 E-value=9.1e-05 Score=69.93 Aligned_cols=92 Identities=9% Similarity=0.120 Sum_probs=61.6
Q ss_pred EeeCccHHHHHHHhH-hccEEEEEcCCcHHHHHHHHHHhCCCC-CceeEEEeece-------------ee-eeCCc-ccc
Q 013017 309 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDG-KLISRRVYRES-------------CI-FSDGT-YTK 371 (451)
Q Consensus 309 V~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~YAd~ILd~LDP~~-~lf~~rL~Re~-------------C~-~~~g~-yiK 371 (451)
..++||+.++|+++. +++.++|.|++.+.+++.+++.++... .+|...+.-+. |. ..+.. +.+
T Consensus 83 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~i~~ 162 (224)
T PLN02954 83 PRLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSGEYAGFDENEPTSRSGGKAEAVQH 162 (224)
T ss_pred CCCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCCcEECccCCCcccCCccHHHHHHH
Confidence 457899999999998 679999999999999999999987753 36655433111 10 00111 112
Q ss_pred cccccCCCCCcEEEEECChhhhccCCCceee
Q 013017 372 DLTVLGVDLAKVAIIDNSPQVFRLQVNNGIP 402 (451)
Q Consensus 372 DLs~LgrdlskvIIIDDsp~~~~~qpeNgIp 402 (451)
-+..+| .+++|+|-|++.-......+|+.
T Consensus 163 ~~~~~~--~~~~i~iGDs~~Di~aa~~~~~~ 191 (224)
T PLN02954 163 IKKKHG--YKTMVMIGDGATDLEARKPGGAD 191 (224)
T ss_pred HHHHcC--CCceEEEeCCHHHHHhhhcCCCC
Confidence 222334 36899999999877664444444
No 70
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=97.29 E-value=0.00013 Score=69.74 Aligned_cols=83 Identities=16% Similarity=0.166 Sum_probs=58.0
Q ss_pred EeeCccHHHHHHHhHhccEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeecee-eee---------CCcccccccccCC
Q 013017 309 VKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESC-IFS---------DGTYTKDLTVLGV 378 (451)
Q Consensus 309 V~lRPgL~eFL~~Lsk~YEIvVfTAs~~~YAd~ILd~LDP~~~lf~~rL~Re~C-~~~---------~g~yiKDLs~Lgr 378 (451)
+.++||+.+||+++.+.+.++|-|++...+++++++.++... +|..++--+.. .+. +...++-+...|
T Consensus 67 i~l~pga~ell~~lk~~~~~~IVS~~~~~~~~~il~~lgi~~-~~an~l~~~~~g~~tG~~~~~~~~K~~~l~~l~~~~- 144 (203)
T TIGR02137 67 LKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQLGFPT-LLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLY- 144 (203)
T ss_pred CCCCccHHHHHHHHHhCCeEEEEeCChHHHHHHHHHHcCCch-hhceeeEEecCCeeECeeecCcchHHHHHHHHHhhC-
Confidence 578999999999999878999999999999999999999875 67655443220 000 011233333333
Q ss_pred CCCcEEEEECChhhhcc
Q 013017 379 DLAKVAIIDNSPQVFRL 395 (451)
Q Consensus 379 dlskvIIIDDsp~~~~~ 395 (451)
.+++.|-|+..-...
T Consensus 145 --~~~v~vGDs~nDl~m 159 (203)
T TIGR02137 145 --YRVIAAGDSYNDTTM 159 (203)
T ss_pred --CCEEEEeCCHHHHHH
Confidence 368888888864433
No 71
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=97.21 E-value=0.00071 Score=73.67 Aligned_cols=108 Identities=12% Similarity=0.147 Sum_probs=73.2
Q ss_pred CceEEEEecCcccccccccccCCCCceEEEEecceeeeEEEeeCccHHHHHHHhH-hccEEEEEcCCcH-----------
Q 013017 269 KSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQS----------- 336 (451)
Q Consensus 269 kkktLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~yV~lRPgL~eFL~~Ls-k~YEIvVfTAs~~----------- 336 (451)
+.+++.||+||||+...... .| ......| ..+-||+.+.|+.|. ++|.|+|+|+...
T Consensus 167 ~~Kia~fD~DGTLi~t~sg~----~~------~~~~~d~-~~l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~ 235 (526)
T TIGR01663 167 QEKIAGFDLDGTIIKTKSGK----VF------PKGPDDW-QIIFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDF 235 (526)
T ss_pred cCcEEEEECCCCccccCCCc----cC------CCCHHHe-eecccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHH
Confidence 45699999999999753210 00 0001111 224699999999998 6799999999766
Q ss_pred -HHHHHHHHHhCCCCCceeEEEeeceeeeeC---Cccccccccc----CCCCCcEEEEECCh
Q 013017 337 -IYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVL----GVDLAKVAIIDNSP 390 (451)
Q Consensus 337 -~YAd~ILd~LDP~~~lf~~rL~Re~C~~~~---g~yiKDLs~L----grdlskvIIIDDsp 390 (451)
..+..+++.++. .|...+..+.|.+.+ |.+..-+..+ +.+++++++|-|+.
T Consensus 236 ~~ki~~iL~~lgi---pfdviia~~~~~~RKP~pGm~~~a~~~~~~~~~Id~~~S~~VGDaa 294 (526)
T TIGR01663 236 KAKIEAIVAKLGV---PFQVFIAIGAGFYRKPLTGMWDHLKEEANDGTEIQEDDCFFVGDAA 294 (526)
T ss_pred HHHHHHHHHHcCC---ceEEEEeCCCCCCCCCCHHHHHHHHHhcCcccCCCHHHeEEeCCcc
Confidence 568888888875 377555555555543 3444334444 57999999999997
No 72
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=97.18 E-value=0.00047 Score=64.68 Aligned_cols=93 Identities=17% Similarity=0.211 Sum_probs=73.8
Q ss_pred EeeCccHHHHHHHhH-hccEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeeceeeeeCC---cccccccccCCCCCcEE
Q 013017 309 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG---TYTKDLTVLGVDLAKVA 384 (451)
Q Consensus 309 V~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~YAd~ILd~LDP~~~lf~~rL~Re~C~~~~g---~yiKDLs~LgrdlskvI 384 (451)
...+||+.+||+.+. +.+.++|.|.+...++..+++.++... +|+..+..+.+...+. .|.+-+..++.+++++|
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~-~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i 170 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIAD-YFSVVIGGDSLPNKKPDPAPLLLACEKLGLDPEEML 170 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCcc-CccEEEcCCCCCCCCcChHHHHHHHHHcCCChhheE
Confidence 568999999999999 579999999999999999999998765 7876666554432322 46677788899999999
Q ss_pred EEECChhhhccCCCceee
Q 013017 385 IIDNSPQVFRLQVNNGIP 402 (451)
Q Consensus 385 IIDDsp~~~~~qpeNgIp 402 (451)
+|+|++.........|++
T Consensus 171 ~igD~~~Di~~a~~~g~~ 188 (226)
T PRK13222 171 FVGDSRNDIQAARAAGCP 188 (226)
T ss_pred EECCCHHHHHHHHHCCCc
Confidence 999998776554445553
No 73
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=97.15 E-value=0.00065 Score=66.58 Aligned_cols=98 Identities=12% Similarity=0.066 Sum_probs=78.1
Q ss_pred EeeCccHHHHHHHhH-hccEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeeceeeeeCC---cccccccccCCC-CCcE
Q 013017 309 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG---TYTKDLTVLGVD-LAKV 383 (451)
Q Consensus 309 V~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~YAd~ILd~LDP~~~lf~~rL~Re~C~~~~g---~yiKDLs~Lgrd-lskv 383 (451)
+..-||+.++|++|. +.|.++|.|++.+..+..+++.+...+-+|+.++..++....+. .|.+-+..+|.. ++.+
T Consensus 100 ~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~d~i~~~~~~~~~KP~p~~~~~a~~~l~~~~~~e~ 179 (267)
T PRK13478 100 ATPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRPDHVVTTDDVPAGRPYPWMALKNAIELGVYDVAAC 179 (267)
T ss_pred CCCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCceEEEcCCcCCCCCCChHHHHHHHHHcCCCCCcce
Confidence 466899999999998 67999999999999999999988766623577777777554443 678888999985 6999
Q ss_pred EEEECChhhhccCCCceeeeccc
Q 013017 384 AIIDNSPQVFRLQVNNGIPIESW 406 (451)
Q Consensus 384 IIIDDsp~~~~~qpeNgIpI~~f 406 (451)
|+|+|++.-.......|++....
T Consensus 180 l~IGDs~~Di~aA~~aG~~~i~v 202 (267)
T PRK13478 180 VKVDDTVPGIEEGLNAGMWTVGV 202 (267)
T ss_pred EEEcCcHHHHHHHHHCCCEEEEE
Confidence 99999998776666677765443
No 74
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=97.10 E-value=0.00025 Score=66.45 Aligned_cols=98 Identities=18% Similarity=0.107 Sum_probs=72.1
Q ss_pred EeeCccHHHHHHHhH-hccEEEEEcCCcHHH--HHHHHHHhCCCCCceeEEEeeceeeeeCC---cccccccccCCCCCc
Q 013017 309 VKQRPHLKTFLERVA-EMFEVVIFTASQSIY--AAQLLDILDPDGKLISRRVYRESCIFSDG---TYTKDLTVLGVDLAK 382 (451)
Q Consensus 309 V~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~Y--Ad~ILd~LDP~~~lf~~rL~Re~C~~~~g---~yiKDLs~Lgrdlsk 382 (451)
+.+.||+.++|++|+ ++|.++|.|++...+ +...+..++.. .+|+..+..+.+...+. .|.+-++++|.++++
T Consensus 93 ~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~-~~fd~v~~s~~~~~~KP~p~~~~~~~~~~g~~~~~ 171 (211)
T TIGR02247 93 TKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIM-ALFDAVVESCLEGLRKPDPRIYQLMLERLGVAPEE 171 (211)
T ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhH-hhCCEEEEeeecCCCCCCHHHHHHHHHHcCCCHHH
Confidence 567899999999998 579999999987654 33333333332 37888877665544433 677888999999999
Q ss_pred EEEEECChhhhccCCCceeeecccc
Q 013017 383 VAIIDNSPQVFRLQVNNGIPIESWF 407 (451)
Q Consensus 383 vIIIDDsp~~~~~qpeNgIpI~~f~ 407 (451)
+++|||++.........|+...-+.
T Consensus 172 ~l~i~D~~~di~aA~~aG~~~i~v~ 196 (211)
T TIGR02247 172 CVFLDDLGSNLKPAAALGITTIKVS 196 (211)
T ss_pred eEEEcCCHHHHHHHHHcCCEEEEEC
Confidence 9999999987766666777665443
No 75
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=97.09 E-value=0.00044 Score=62.88 Aligned_cols=91 Identities=15% Similarity=0.157 Sum_probs=71.2
Q ss_pred eeCccHHHHHHHhH-hccEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeeceeeeeCC---cccccccccCCCCCcEEE
Q 013017 310 KQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG---TYTKDLTVLGVDLAKVAI 385 (451)
Q Consensus 310 ~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~YAd~ILd~LDP~~~lf~~rL~Re~C~~~~g---~yiKDLs~LgrdlskvII 385 (451)
.+.||+.++|++|+ +.+.++|.|++. .+..+++.++... +|+..+..++-...+. .|.+-+++++.+++++|+
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~--~~~~~l~~~~l~~-~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~~~v~ 163 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASK--NAPTVLEKLGLID-YFDAIVDPAEIKKGKPDPEIFLAAAEGLGVSPSECIG 163 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCc--cHHHHHHhcCcHh-hCcEEEehhhcCCCCCChHHHHHHHHHcCCCHHHeEE
Confidence 56899999999998 669999999764 3577889988765 7888877654333332 577888899999999999
Q ss_pred EECChhhhccCCCceeee
Q 013017 386 IDNSPQVFRLQVNNGIPI 403 (451)
Q Consensus 386 IDDsp~~~~~qpeNgIpI 403 (451)
|+|++..+.....+|+..
T Consensus 164 vgD~~~di~aA~~aG~~~ 181 (185)
T TIGR01990 164 IEDAQAGIEAIKAAGMFA 181 (185)
T ss_pred EecCHHHHHHHHHcCCEE
Confidence 999997776655666654
No 76
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=97.04 E-value=0.00079 Score=67.37 Aligned_cols=97 Identities=12% Similarity=0.162 Sum_probs=73.8
Q ss_pred EeeCccHHHHHHHhH-hccEEEEEcCCcHHHHHHHHHHhCCCC--CceeEEEeeceeeeeCC---cccccccccCCCCCc
Q 013017 309 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDG--KLISRRVYRESCIFSDG---TYTKDLTVLGVDLAK 382 (451)
Q Consensus 309 V~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~YAd~ILd~LDP~~--~lf~~rL~Re~C~~~~g---~yiKDLs~Lgrdlsk 382 (451)
+.+.||+.++|++|+ ++|.++|.|++...++..+++.+.-.+ .+|... ..+.+...+. .|.+-+..+|.++++
T Consensus 143 ~~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v-~~~~~~~~KP~p~~~~~a~~~~~~~p~~ 221 (286)
T PLN02779 143 LPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVF-AGDDVPKKKPDPDIYNLAAETLGVDPSR 221 (286)
T ss_pred CCchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEE-eccccCCCCCCHHHHHHHHHHhCcChHH
Confidence 467999999999998 679999999999999999998873222 223332 4554433332 577788899999999
Q ss_pred EEEEECChhhhccCCCceeeeccc
Q 013017 383 VAIIDNSPQVFRLQVNNGIPIESW 406 (451)
Q Consensus 383 vIIIDDsp~~~~~qpeNgIpI~~f 406 (451)
+|+|+|++..+.....+|+...-.
T Consensus 222 ~l~IGDs~~Di~aA~~aG~~~i~v 245 (286)
T PLN02779 222 CVVVEDSVIGLQAAKAAGMRCIVT 245 (286)
T ss_pred EEEEeCCHHhHHHHHHcCCEEEEE
Confidence 999999998887666677665544
No 77
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=97.04 E-value=0.0013 Score=67.46 Aligned_cols=95 Identities=15% Similarity=0.186 Sum_probs=66.5
Q ss_pred EeeCccHHHHHHHhH-hccEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEe-ece---------eee--eCCccc-cccc
Q 013017 309 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVY-RES---------CIF--SDGTYT-KDLT 374 (451)
Q Consensus 309 V~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~YAd~ILd~LDP~~~lf~~rL~-Re~---------C~~--~~g~yi-KDLs 374 (451)
+.++||+.++|+++. ..+.++|.|++...+++.+++.++... .+...+- .+. +.. .+...+ +-++
T Consensus 180 l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~-~~an~lei~dg~ltg~v~g~iv~~k~K~~~L~~la~ 258 (322)
T PRK11133 180 LPLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDA-AVANELEIMDGKLTGNVLGDIVDAQYKADTLTRLAQ 258 (322)
T ss_pred CCCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCe-EEEeEEEEECCEEEeEecCccCCcccHHHHHHHHHH
Confidence 668999999999999 669999999999999999999988754 3433321 111 000 112222 3335
Q ss_pred ccCCCCCcEEEEECChhhhccCCCceeeec
Q 013017 375 VLGVDLAKVAIIDNSPQVFRLQVNNGIPIE 404 (451)
Q Consensus 375 ~LgrdlskvIIIDDsp~~~~~qpeNgIpI~ 404 (451)
.+|.++++||.|-|+..-..+-..-|+.|-
T Consensus 259 ~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA 288 (322)
T PRK11133 259 EYEIPLAQTVAIGDGANDLPMIKAAGLGIA 288 (322)
T ss_pred HcCCChhhEEEEECCHHHHHHHHHCCCeEE
Confidence 779999999999999976655444555553
No 78
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=97.02 E-value=0.0011 Score=62.07 Aligned_cols=84 Identities=14% Similarity=0.130 Sum_probs=74.6
Q ss_pred EeeCccHHHHHHHhHhccEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeeceeeeeCC---cccccccccCCCCCcEEE
Q 013017 309 VKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG---TYTKDLTVLGVDLAKVAI 385 (451)
Q Consensus 309 V~lRPgL~eFL~~Lsk~YEIvVfTAs~~~YAd~ILd~LDP~~~lf~~rL~Re~C~~~~g---~yiKDLs~LgrdlskvII 385 (451)
+..-|++.++|+.+.+.|.++|.|.+...++...+..+... .+|+..++.+.....+. .|..-+..+|.+++.+++
T Consensus 98 ~~~~~~~~~~L~~l~~~~~l~ilTNg~~~~~~~~l~~~gl~-~~Fd~v~~s~~~g~~KP~~~~f~~~~~~~g~~p~~~l~ 176 (229)
T COG1011 98 LPDYPEALEALKELGKKYKLGILTNGARPHQERKLRQLGLL-DYFDAVFISEDVGVAKPDPEIFEYALEKLGVPPEEALF 176 (229)
T ss_pred CccChhHHHHHHHHHhhccEEEEeCCChHHHHHHHHHcCCh-hhhheEEEecccccCCCCcHHHHHHHHHcCCCcceEEE
Confidence 56788999999999977999999999999999999999955 49999999988876654 688889999999999999
Q ss_pred EECChhhh
Q 013017 386 IDNSPQVF 393 (451)
Q Consensus 386 IDDsp~~~ 393 (451)
|||+...-
T Consensus 177 VgD~~~~d 184 (229)
T COG1011 177 VGDSLEND 184 (229)
T ss_pred ECCChhhh
Confidence 99999765
No 79
>PRK08238 hypothetical protein; Validated
Probab=97.01 E-value=0.0022 Score=69.14 Aligned_cols=90 Identities=13% Similarity=0.079 Sum_probs=58.4
Q ss_pred EeeCccHHHHHHHhH-hccEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeeceeeeeCC--cccccccccCCCCCcEEE
Q 013017 309 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG--TYTKDLTVLGVDLAKVAI 385 (451)
Q Consensus 309 V~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~YAd~ILd~LDP~~~lf~~rL~Re~C~~~~g--~yiKDLs~LgrdlskvII 385 (451)
...+|++.++|+++. +++.++|.|++.+.++++++++++. |+..+..+.....+| ....-.+.++ .+.++.
T Consensus 71 lp~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGl----Fd~Vigsd~~~~~kg~~K~~~l~~~l~--~~~~~y 144 (479)
T PRK08238 71 LPYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGL----FDGVFASDGTTNLKGAAKAAALVEAFG--ERGFDY 144 (479)
T ss_pred CCCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC----CCEEEeCCCccccCCchHHHHHHHHhC--ccCeeE
Confidence 357899999999998 7899999999999999999999964 666666544322222 1111112233 244677
Q ss_pred EECChhhhc--cCCCceeeec
Q 013017 386 IDNSPQVFR--LQVNNGIPIE 404 (451)
Q Consensus 386 IDDsp~~~~--~qpeNgIpI~ 404 (451)
+-|+..-.. ..-++.+.|.
T Consensus 145 vGDS~~Dlp~~~~A~~av~Vn 165 (479)
T PRK08238 145 AGNSAADLPVWAAARRAIVVG 165 (479)
T ss_pred ecCCHHHHHHHHhCCCeEEEC
Confidence 788774331 1234555443
No 80
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=97.01 E-value=0.0014 Score=60.28 Aligned_cols=94 Identities=14% Similarity=0.156 Sum_probs=67.5
Q ss_pred EeeCccHHHHHHHhH-hccEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeeceeeeeCC-------------ccccccc
Q 013017 309 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG-------------TYTKDLT 374 (451)
Q Consensus 309 V~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~YAd~ILd~LDP~~~lf~~rL~Re~C~~~~g-------------~yiKDLs 374 (451)
+.++||+.++|+.+. +.+.++|.|++...+++.+++.++... +|...+..+......+ .+.+-+.
T Consensus 79 ~~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~-~~~~~~~~~~~g~~~p~~~~~~~~~~k~~~~~~~~~ 157 (201)
T TIGR01491 79 ISLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDY-VYSNELVFDEKGFIQPDGIVRVTFDNKGEAVERLKR 157 (201)
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCe-EEEEEEEEcCCCeEecceeeEEccccHHHHHHHHHH
Confidence 667999999999998 679999999999999999999998764 6665554322111111 1122244
Q ss_pred ccCCCCCcEEEEECChhhhccCCCceeee
Q 013017 375 VLGVDLAKVAIIDNSPQVFRLQVNNGIPI 403 (451)
Q Consensus 375 ~LgrdlskvIIIDDsp~~~~~qpeNgIpI 403 (451)
.+|.+++++++|.|+..-...-...|+++
T Consensus 158 ~~~~~~~~~i~iGDs~~D~~~a~~ag~~~ 186 (201)
T TIGR01491 158 ELNPSLTETVAVGDSKNDLPMFEVADISI 186 (201)
T ss_pred HhCCCHHHEEEEcCCHhHHHHHHhcCCeE
Confidence 56888999999999986665444455544
No 81
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=97.00 E-value=0.00074 Score=62.79 Aligned_cols=90 Identities=13% Similarity=0.083 Sum_probs=69.7
Q ss_pred eeCccHHHHHHHhH-hccEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeeceeeeeCC---cccccccccCCCCCcEEE
Q 013017 310 KQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG---TYTKDLTVLGVDLAKVAI 385 (451)
Q Consensus 310 ~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~YAd~ILd~LDP~~~lf~~rL~Re~C~~~~g---~yiKDLs~LgrdlskvII 385 (451)
...||+.++|++|+ +.|.++|.|++...+ ..+++.++..+ +|+.++..+++...++ .|.+-++.+|.+++++|+
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~-~~~l~~~~l~~-~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~~~~~~~ 182 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSRL-RGLLEALGLLE-YFDFVVTSYEVGAEKPDPKIFQEALERAGISPEEALH 182 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchhH-HHHHHHCCcHH-hcceEEeecccCCCCCCHHHHHHHHHHcCCChhHEEE
Confidence 56799999999998 469999999988764 77888887765 8988888776655443 477888899999999999
Q ss_pred EECCh-hhhccCCCcee
Q 013017 386 IDNSP-QVFRLQVNNGI 401 (451)
Q Consensus 386 IDDsp-~~~~~qpeNgI 401 (451)
|+|++ .-.......|+
T Consensus 183 IgD~~~~Di~~A~~aG~ 199 (203)
T TIGR02252 183 IGDSLRNDYQGARAAGW 199 (203)
T ss_pred ECCCchHHHHHHHHcCC
Confidence 99997 34433333444
No 82
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=97.00 E-value=0.0015 Score=60.81 Aligned_cols=80 Identities=16% Similarity=0.189 Sum_probs=66.9
Q ss_pred CccHHHHHHHhH-hccEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeeceeeeeCC---cccccccccCCCCCcEEEEE
Q 013017 312 RPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG---TYTKDLTVLGVDLAKVAIID 387 (451)
Q Consensus 312 RPgL~eFL~~Ls-k~YEIvVfTAs~~~YAd~ILd~LDP~~~lf~~rL~Re~C~~~~g---~yiKDLs~LgrdlskvIIID 387 (451)
.|+..++|++|+ +.+.++|.|++.+.+++.+++.++... +|+..+..++... +. .|.+.+..+|.+++++|+|+
T Consensus 108 ~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~-~f~~~~~~~~~~~-KP~p~~~~~~~~~~~~~~~~~i~vG 185 (197)
T TIGR01548 108 LLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEI-LFPVQIWMEDCPP-KPNPEPLILAAKALGVEACHAAMVG 185 (197)
T ss_pred ccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchh-hCCEEEeecCCCC-CcCHHHHHHHHHHhCcCcccEEEEe
Confidence 455699999998 569999999999999999999998875 8998888776543 33 56778888999999999999
Q ss_pred CChhhh
Q 013017 388 NSPQVF 393 (451)
Q Consensus 388 Dsp~~~ 393 (451)
|++.-.
T Consensus 186 D~~~Di 191 (197)
T TIGR01548 186 DTVDDI 191 (197)
T ss_pred CCHHHH
Confidence 998543
No 83
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=96.98 E-value=0.0012 Score=63.86 Aligned_cols=95 Identities=11% Similarity=0.077 Sum_probs=66.5
Q ss_pred ceEEEEecCcccccccccccCCCCceEEEEecceeeeEEEeeCccHHHHHHHhH-hccEEEEEcCCcHHHHH--HHHHHh
Q 013017 270 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAA--QLLDIL 346 (451)
Q Consensus 270 kktLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~yV~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~YAd--~ILd~L 346 (451)
...++||+||||.+.. ..-||+.++|++|. +.+.++|.|++.+..++ ..|+.+
T Consensus 8 ~~~~~~D~dG~l~~~~------------------------~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~ 63 (242)
T TIGR01459 8 YDVFLLDLWGVIIDGN------------------------HTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSL 63 (242)
T ss_pred CCEEEEecccccccCC------------------------ccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHC
Confidence 3478999999998652 23699999999998 67999999999988777 788888
Q ss_pred CCCCCceeEEEeeceeeeeCCcccccccccCCCCCcEEEEECCh
Q 013017 347 DPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSP 390 (451)
Q Consensus 347 DP~~~lf~~rL~Re~C~~~~g~yiKDLs~LgrdlskvIIIDDsp 390 (451)
+....+|+.++....... ..+..-++.+|..+.++++|-|..
T Consensus 64 gl~~~~~~~Ii~s~~~~~--~~l~~~~~~~~~~~~~~~~vGd~~ 105 (242)
T TIGR01459 64 GINADLPEMIISSGEIAV--QMILESKKRFDIRNGIIYLLGHLE 105 (242)
T ss_pred CCCccccceEEccHHHHH--HHHHhhhhhccCCCceEEEeCCcc
Confidence 876426777776553221 111122234455566677776654
No 84
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=96.87 E-value=0.0017 Score=60.74 Aligned_cols=115 Identities=16% Similarity=0.146 Sum_probs=72.5
Q ss_pred CceEEEEecCcccccccccccCCCCceEEEEecceeeeEEEeeCccHHHHHHHhH-hccEEEEEcCCcHHHHHHHHHHhC
Q 013017 269 KSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILD 347 (451)
Q Consensus 269 kkktLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~yV~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~YAd~ILd~LD 347 (451)
+.+.+++|+||||+......... + .....+.. |.+ .=++.+. +.++++|.|......+..+++.+.
T Consensus 20 ~ikli~~D~Dgtl~~~~i~~~~~-~---------~~~~~~~~-~d~--~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lg 86 (183)
T PRK09484 20 NIRLLICDVDGVFSDGLIYMGNN-G---------EELKAFNV-RDG--YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLG 86 (183)
T ss_pred CceEEEEcCCeeeecCEEEEcCC-C---------CEEEEEec-cch--HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcC
Confidence 46799999999999863211000 1 11111111 222 2334444 789999999999999999999997
Q ss_pred CCCCceeEEEeeceeeeeCCcccccccccCCCCCcEEEEECChhhhccCCCceeee
Q 013017 348 PDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPI 403 (451)
Q Consensus 348 P~~~lf~~rL~Re~C~~~~g~yiKDLs~LgrdlskvIIIDDsp~~~~~qpeNgIpI 403 (451)
... +|. .+.-....+.+-+..+|.+++.++.|-|+..-...-...|+.+
T Consensus 87 l~~-~f~------g~~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~ 135 (183)
T PRK09484 87 ITH-LYQ------GQSNKLIAFSDLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSV 135 (183)
T ss_pred Cce-eec------CCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeE
Confidence 654 443 1111112445566788999999999999987665444445554
No 85
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=96.87 E-value=0.00025 Score=69.26 Aligned_cols=95 Identities=17% Similarity=0.144 Sum_probs=73.9
Q ss_pred EeeCccHHHHHHHhH-hccEEEEEcCCcHHHHHHHHHHhC-CCCCceeEEEe--eceeeeeC---CcccccccccCCCC-
Q 013017 309 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILD-PDGKLISRRVY--RESCIFSD---GTYTKDLTVLGVDL- 380 (451)
Q Consensus 309 V~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~YAd~ILd~LD-P~~~lf~~rL~--Re~C~~~~---g~yiKDLs~Lgrdl- 380 (451)
++.-||+..+++.|. ..-.+.++|++.+..++..+..+. +.. .|++... -..+...+ ..|.+.++++|..+
T Consensus 91 ~~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~~~~~-~f~~~v~~d~~~v~~gKP~Pdi~l~A~~~l~~~~~ 169 (222)
T KOG2914|consen 91 SILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHEDIFK-NFSHVVLGDDPEVKNGKPDPDIYLKAAKRLGVPPP 169 (222)
T ss_pred cccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhhHHHH-hcCCCeecCCccccCCCCCchHHHHHHHhcCCCCc
Confidence 778999999999999 679999999999999999888876 443 5776666 33333332 36899999999998
Q ss_pred CcEEEEECChhhhccCCCceeeec
Q 013017 381 AKVAIIDNSPQVFRLQVNNGIPIE 404 (451)
Q Consensus 381 skvIIIDDsp~~~~~qpeNgIpI~ 404 (451)
+++++++|++........-|.++.
T Consensus 170 ~k~lVfeds~~Gv~aa~aagm~vi 193 (222)
T KOG2914|consen 170 SKCLVFEDSPVGVQAAKAAGMQVV 193 (222)
T ss_pred cceEEECCCHHHHHHHHhcCCeEE
Confidence 999999999987755444444433
No 86
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=96.86 E-value=0.0023 Score=57.42 Aligned_cols=73 Identities=18% Similarity=0.120 Sum_probs=53.2
Q ss_pred eEEEEecCcccccccccccCCCCceEEEEecceeeeEEEeeCccHHHHHHHhH-hccEEEEEcCCcHHHHH---------
Q 013017 271 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAA--------- 340 (451)
Q Consensus 271 ktLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~yV~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~YAd--------- 340 (451)
+.+++||||||+.....+ +. .....|.+.+.|+++. +.++|+++|+-......
T Consensus 2 K~i~~DiDGTL~~~~~~~-----y~------------~~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~~n~~~i~~~ 64 (126)
T TIGR01689 2 KRLVMDLDNTITLTENGD-----YA------------NVAPILAVIEKLRHYKALGFEIVISSSRNMRTYEGNVGKINIH 64 (126)
T ss_pred CEEEEeCCCCcccCCCCc-----cc------------ccccCHHHHHHHHHHHHCCCEEEEECCCCchhhhccccccchh
Confidence 479999999997542110 00 1345788999999985 78999999999888776
Q ss_pred ---HHHHHhCCCCCceeEEEeec
Q 013017 341 ---QLLDILDPDGKLISRRVYRE 360 (451)
Q Consensus 341 ---~ILd~LDP~~~lf~~rL~Re 360 (451)
.+++.|+-.+-.++..+.|.
T Consensus 65 ~~~~t~~wL~k~~ipYd~l~~~k 87 (126)
T TIGR01689 65 TLPIIILWLNQHNVPYDEIYVGK 87 (126)
T ss_pred hHHHHHHHHHHcCCCCceEEeCC
Confidence 77778877775566666654
No 87
>PLN02811 hydrolase
Probab=96.84 E-value=0.0012 Score=62.85 Aligned_cols=97 Identities=13% Similarity=0.118 Sum_probs=72.7
Q ss_pred EeeCccHHHHHHHhH-hccEEEEEcCCcHHHHHH-HHHHhCCCCCceeEEEeec--eeeeeC---CcccccccccC---C
Q 013017 309 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQ-LLDILDPDGKLISRRVYRE--SCIFSD---GTYTKDLTVLG---V 378 (451)
Q Consensus 309 V~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~YAd~-ILd~LDP~~~lf~~rL~Re--~C~~~~---g~yiKDLs~Lg---r 378 (451)
+.+.||+.++|+.|+ ..|.++|.|++.+.+... +++..... .+|+.+++.+ ++...+ ..|.+-+..+| .
T Consensus 77 ~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~-~~f~~i~~~~~~~~~~~KP~p~~~~~a~~~~~~~~~ 155 (220)
T PLN02811 77 SDLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELF-SLMHHVVTGDDPEVKQGKPAPDIFLAAARRFEDGPV 155 (220)
T ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHH-hhCCEEEECChhhccCCCCCcHHHHHHHHHhCCCCC
Confidence 456899999999998 579999999998876554 33333333 3788888887 655433 26778888886 8
Q ss_pred CCCcEEEEECChhhhccCCCceeeeccc
Q 013017 379 DLAKVAIIDNSPQVFRLQVNNGIPIESW 406 (451)
Q Consensus 379 dlskvIIIDDsp~~~~~qpeNgIpI~~f 406 (451)
.++.+|+|+|+..........|++..-.
T Consensus 156 ~~~~~v~IgDs~~di~aA~~aG~~~i~v 183 (220)
T PLN02811 156 DPGKVLVFEDAPSGVEAAKNAGMSVVMV 183 (220)
T ss_pred CccceEEEeccHhhHHHHHHCCCeEEEE
Confidence 9999999999998776666677665544
No 88
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=96.83 E-value=0.0013 Score=63.98 Aligned_cols=94 Identities=12% Similarity=0.089 Sum_probs=70.5
Q ss_pred EeeCccHHHHHHHhH-hccEEEEEcCCcHHHHHHHHHHhC---CCCCceeEEEeeceeee-eCCcccccccccCCCCCcE
Q 013017 309 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILD---PDGKLISRRVYRESCIF-SDGTYTKDLTVLGVDLAKV 383 (451)
Q Consensus 309 V~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~YAd~ILd~LD---P~~~lf~~rL~Re~C~~-~~g~yiKDLs~Lgrdlskv 383 (451)
..+.||+.++|+++. +++.++|+|+++..+...+++..+ ... +|+..+....+.. ....|.+-+..+|.+++++
T Consensus 94 ~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~-~f~~~fd~~~g~KP~p~~y~~i~~~lgv~p~e~ 172 (220)
T TIGR01691 94 SHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTP-YFSGYFDTTVGLKTEAQSYVKIAGQLGSPPREI 172 (220)
T ss_pred cCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhh-hcceEEEeCcccCCCHHHHHHHHHHhCcChhHE
Confidence 457899999999998 689999999999999999988863 322 5665443211111 1236788889999999999
Q ss_pred EEEECChhhhccCCCceeee
Q 013017 384 AIIDNSPQVFRLQVNNGIPI 403 (451)
Q Consensus 384 IIIDDsp~~~~~qpeNgIpI 403 (451)
++|+|++.........|+..
T Consensus 173 lfVgDs~~Di~AA~~AG~~t 192 (220)
T TIGR01691 173 LFLSDIINELDAARKAGLHT 192 (220)
T ss_pred EEEeCCHHHHHHHHHcCCEE
Confidence 99999997765555566654
No 89
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=96.77 E-value=0.00095 Score=66.88 Aligned_cols=92 Identities=15% Similarity=0.136 Sum_probs=56.3
Q ss_pred CCceEEEEecCcccccccccc----cCCCCceEEEEecceeeeEEEeeCccHHHHHHHhH-hccEEEEEcCCcHHHHH--
Q 013017 268 RKSVTLVLDLDETLVHSTLEY----CDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAA-- 340 (451)
Q Consensus 268 ~kkktLVLDLDeTLVhSs~~~----~~~~df~~~v~~~~~~~~~yV~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~YAd-- 340 (451)
.+++.+|||+|||+++.+... .....|. ...|+.-....-...-||+.+||+++. ++..+++.|.....+.+
T Consensus 73 ~kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~-~~~w~~wv~~~~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T 151 (266)
T TIGR01533 73 DKKYAIVLDLDETVLDNSPYQGYQVLNNKPFD-PETWDKWVQAAQAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAAT 151 (266)
T ss_pred CCCCEEEEeCccccccChHHHHHHhcCCCcCC-HHHHHHHHHcCCCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHH
Confidence 456799999999999876321 0111110 000110011122556899999999997 67999999998766555
Q ss_pred -HHHHHhCCCCCceeEEEeec
Q 013017 341 -QLLDILDPDGKLISRRVYRE 360 (451)
Q Consensus 341 -~ILd~LDP~~~lf~~rL~Re 360 (451)
..|+.++.....+++.++|+
T Consensus 152 ~~~Lkk~Gi~~~~~d~lllr~ 172 (266)
T TIGR01533 152 LKNLKRFGFPQADEEHLLLKK 172 (266)
T ss_pred HHHHHHcCcCCCCcceEEeCC
Confidence 45555555433346677775
No 90
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=96.37 E-value=0.0096 Score=56.68 Aligned_cols=95 Identities=11% Similarity=0.044 Sum_probs=66.1
Q ss_pred EeeCccHHHHHHHhH-hccEEEEEcCCcHHHHHHHHHHhCCC-CCceeEE--EeeceeeeeCC-------------cccc
Q 013017 309 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPD-GKLISRR--VYRESCIFSDG-------------TYTK 371 (451)
Q Consensus 309 V~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~YAd~ILd~LDP~-~~lf~~r--L~Re~C~~~~g-------------~yiK 371 (451)
+.++||+.+||+++. +.+.++|.|++...|++++++.+ .. ..++... +..+.....+. ...+
T Consensus 73 ~~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~~~~K~~ 151 (219)
T PRK09552 73 AEIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITITWPHPCDEHCQNHCGCCKPS 151 (219)
T ss_pred CCcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEEeccCCccccccccCCCchHH
Confidence 678999999999998 67999999999999999999987 32 2233222 22222111111 1234
Q ss_pred cccccCCCCCcEEEEECChhhhccCCCceeeec
Q 013017 372 DLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIE 404 (451)
Q Consensus 372 DLs~LgrdlskvIIIDDsp~~~~~qpeNgIpI~ 404 (451)
-+..++....++|.|.|+..-.......|+.+.
T Consensus 152 ~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a 184 (219)
T PRK09552 152 LIRKLSDTNDFHIVIGDSITDLEAAKQADKVFA 184 (219)
T ss_pred HHHHhccCCCCEEEEeCCHHHHHHHHHCCccee
Confidence 556667788899999999987765555666443
No 91
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=96.31 E-value=0.0012 Score=59.78 Aligned_cols=76 Identities=13% Similarity=0.126 Sum_probs=64.7
Q ss_pred EeeCccHHHHHHHhHhccEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeeceeeeeCC---cccccccccCCCCCcEEE
Q 013017 309 VKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG---TYTKDLTVLGVDLAKVAI 385 (451)
Q Consensus 309 V~lRPgL~eFL~~Lsk~YEIvVfTAs~~~YAd~ILd~LDP~~~lf~~rL~Re~C~~~~g---~yiKDLs~LgrdlskvII 385 (451)
+..+||+.++|+. ++|.|++...+...+++.+.... +|+..++.+.....++ .|.+-++++|.+++.+++
T Consensus 89 ~~~~~g~~~~L~~------~~i~Tn~~~~~~~~~l~~~~l~~-~fd~v~~~~~~~~~KP~p~~f~~~~~~~~~~p~~~l~ 161 (175)
T TIGR01493 89 LPPWPDSAAALAR------VAILSNASHWAFDQFAQQAGLPW-YFDRAFSVDTVRAYKPDPVVYELVFDTVGLPPDRVLM 161 (175)
T ss_pred CCCCCchHHHHHH------HhhhhCCCHHHHHHHHHHCCCHH-HHhhhccHhhcCCCCCCHHHHHHHHHHHCCCHHHeEe
Confidence 5579999999993 78999999999999999998765 8988887776555443 678889999999999999
Q ss_pred EECChh
Q 013017 386 IDNSPQ 391 (451)
Q Consensus 386 IDDsp~ 391 (451)
|+|++.
T Consensus 162 vgD~~~ 167 (175)
T TIGR01493 162 VAAHQW 167 (175)
T ss_pred EecChh
Confidence 999974
No 92
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=96.16 E-value=0.0048 Score=59.62 Aligned_cols=86 Identities=13% Similarity=0.212 Sum_probs=64.5
Q ss_pred EeeCccHHHHHHHhH-hccEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeeceeeeeC---Cc---------cc-cccc
Q 013017 309 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GT---------YT-KDLT 374 (451)
Q Consensus 309 V~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~YAd~ILd~LDP~~~lf~~rL~Re~C~~~~---g~---------yi-KDLs 374 (451)
+.++||+.+.+++++ ..+.++|.|+|...+++++.+.|..+. .+..++-.++=.+.. |. -+ .=+.
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~-~~an~l~~~dG~ltG~v~g~~~~~~~K~~~l~~~~~ 154 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDY-VVANELEIDDGKLTGRVVGPICDGEGKAKALRELAA 154 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCch-heeeEEEEeCCEEeceeeeeecCcchHHHHHHHHHH
Confidence 788999999999999 679999999999999999999999986 677777655411111 11 11 1123
Q ss_pred ccCCCCCcEEEEECChhhhcc
Q 013017 375 VLGVDLAKVAIIDNSPQVFRL 395 (451)
Q Consensus 375 ~LgrdlskvIIIDDsp~~~~~ 395 (451)
.+|.++++++-+=|+..-..+
T Consensus 155 ~~g~~~~~~~a~gDs~nDlpm 175 (212)
T COG0560 155 ELGIPLEETVAYGDSANDLPM 175 (212)
T ss_pred HcCCCHHHeEEEcCchhhHHH
Confidence 458888899999888865533
No 93
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=96.00 E-value=0.0086 Score=56.48 Aligned_cols=118 Identities=19% Similarity=0.264 Sum_probs=84.2
Q ss_pred CCccCCCCceEEEEecCcccccccccccCCCCceEEEEecceeeeEEEeeCccHHHHHHHhH-hccEEEEEcCCcHHHHH
Q 013017 262 PKETQGRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAA 340 (451)
Q Consensus 262 Pk~~~~~kkktLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~yV~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~YAd 340 (451)
|.....++.+.+|+|||+|||-= ... ..-|-+.+.+..++ ++-.++|.|...+.-+.
T Consensus 20 ~~~L~~~Gikgvi~DlDNTLv~w--d~~--------------------~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~ 77 (175)
T COG2179 20 PDILKAHGIKGVILDLDNTLVPW--DNP--------------------DATPELRAWLAELKEAGIKVVVVSNNKESRVA 77 (175)
T ss_pred HHHHHHcCCcEEEEeccCceecc--cCC--------------------CCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHH
Confidence 34444678889999999999852 211 12588999999999 66999999999999999
Q ss_pred HHHHHhCCCCCceeEEEeeceeeeeCCcccccccccCCCCCcEEEEECChh--hhccCCCc--eeeeccccC
Q 013017 341 QLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQ--VFRLQVNN--GIPIESWFD 408 (451)
Q Consensus 341 ~ILd~LDP~~~lf~~rL~Re~C~~~~g~yiKDLs~LgrdlskvIIIDDsp~--~~~~qpeN--gIpI~~f~g 408 (451)
.++..||..- + ++-- .-....+.|.|..++.++++|++|-|... +...+... .|.|+|-..
T Consensus 78 ~~~~~l~v~f--i----~~A~-KP~~~~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~~tIlV~Pl~~ 142 (175)
T COG2179 78 RAAEKLGVPF--I----YRAK-KPFGRAFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGMRTILVEPLVA 142 (175)
T ss_pred hhhhhcCCce--e----eccc-CccHHHHHHHHHHcCCChhHEEEEcchhhhhhhcccccCcEEEEEEEecc
Confidence 9999998752 1 1100 00112567889999999999999999973 44444322 466666543
No 94
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=95.98 E-value=0.021 Score=55.50 Aligned_cols=58 Identities=31% Similarity=0.339 Sum_probs=51.1
Q ss_pred ceEEEEecCcccccccccccCCCCceEEEEecceeeeEEEeeCccHHHHHHHhH-hccEEEEEcCCcHHHHHHHHHHhCC
Q 013017 270 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDP 348 (451)
Q Consensus 270 kktLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~yV~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~YAd~ILd~LDP 348 (451)
.+.+++||||||+.+... ..|...+.|+++. +.+.++|.|......+.++++.|..
T Consensus 3 ~kli~~DlDGTLl~~~~~-----------------------i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~ 59 (264)
T COG0561 3 IKLLAFDLDGTLLDSNKT-----------------------ISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGL 59 (264)
T ss_pred eeEEEEcCCCCccCCCCc-----------------------cCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCC
Confidence 568999999999987432 4788999999885 8999999999999999999999998
Q ss_pred CC
Q 013017 349 DG 350 (451)
Q Consensus 349 ~~ 350 (451)
.+
T Consensus 60 ~~ 61 (264)
T COG0561 60 DG 61 (264)
T ss_pred Cc
Confidence 86
No 95
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=95.87 E-value=0.024 Score=55.90 Aligned_cols=58 Identities=19% Similarity=0.155 Sum_probs=47.7
Q ss_pred ceEEEEecCcccccccccccCCCCceEEEEecceeeeEEEeeCccHHHHHHHhH-hccEEEEEcCCcHHHHHHHHHHhCC
Q 013017 270 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDP 348 (451)
Q Consensus 270 kktLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~yV~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~YAd~ILd~LDP 348 (451)
.+.+++||||||+.+.. ...|...+.|+++. +.+.++|.|.-....+..+++.++.
T Consensus 4 ~kli~~DlDGTLl~~~~-----------------------~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l 60 (273)
T PRK00192 4 KLLVFTDLDGTLLDHHT-----------------------YSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGL 60 (273)
T ss_pred ceEEEEcCcccCcCCCC-----------------------cCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCC
Confidence 46899999999997521 12577889999998 5699999999999999999999876
Q ss_pred CC
Q 013017 349 DG 350 (451)
Q Consensus 349 ~~ 350 (451)
..
T Consensus 61 ~~ 62 (273)
T PRK00192 61 ED 62 (273)
T ss_pred CC
Confidence 53
No 96
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=95.77 E-value=0.018 Score=53.95 Aligned_cols=115 Identities=12% Similarity=0.120 Sum_probs=74.3
Q ss_pred CceEEEEecCcccccccccccCCCCceEEEEecceee-eEEEeeCccHHHHHHHh-HhccEEEEEcCCcHHHHHHHHHHh
Q 013017 269 KSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEH-TVYVKQRPHLKTFLERV-AEMFEVVIFTASQSIYAAQLLDIL 346 (451)
Q Consensus 269 kkktLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~-~~yV~lRPgL~eFL~~L-sk~YEIvVfTAs~~~YAd~ILd~L 346 (451)
.-+++|||.||+|..-+.. ++.... ..-+..|-|.-- +.| .+++.++|.|+....+++.+++.+
T Consensus 6 ~i~~~v~d~dGv~tdg~~~------------~~~~g~~~~~~~~~D~~~~--~~L~~~Gi~laIiT~k~~~~~~~~l~~l 71 (169)
T TIGR02726 6 NIKLVILDVDGVMTDGRIV------------INDEGIESRNFDIKDGMGV--IVLQLCGIDVAIITSKKSGAVRHRAEEL 71 (169)
T ss_pred cCeEEEEeCceeeECCeEE------------EcCCCcEEEEEecchHHHH--HHHHHCCCEEEEEECCCcHHHHHHHHHC
Confidence 3568999999999875421 111111 222344555432 333 367999999999999999999999
Q ss_pred CCCCCceeEEEeeceeeeeCCcccccccccCCCCCcEEEEECChhhhccCCCceeeec
Q 013017 347 DPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIE 404 (451)
Q Consensus 347 DP~~~lf~~rL~Re~C~~~~g~yiKDLs~LgrdlskvIIIDDsp~~~~~qpeNgIpI~ 404 (451)
.... +|... .-....+..-+..+|.++++++.|.|++.-...-...|+.+-
T Consensus 72 gi~~-~f~~~------kpkp~~~~~~~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~a 122 (169)
T TIGR02726 72 KIKR-FHEGI------KKKTEPYAQMLEEMNISDAEVCYVGDDLVDLSMMKRVGLAVA 122 (169)
T ss_pred CCcE-EEecC------CCCHHHHHHHHHHcCcCHHHEEEECCCHHHHHHHHHCCCeEE
Confidence 8764 55421 001124455567789999999999999866544333444443
No 97
>PTZ00445 p36-lilke protein; Provisional
Probab=95.68 E-value=0.015 Score=56.78 Aligned_cols=132 Identities=16% Similarity=0.166 Sum_probs=79.8
Q ss_pred CCCceEEEEecCcccccccccccCCCCceEEEEecceeeeEEEeeCccHHHHHHHhH-hccEEEEEcCCcHHH-------
Q 013017 267 GRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIY------- 338 (451)
Q Consensus 267 ~~kkktLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~yV~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~Y------- 338 (451)
..+-+.+++|||.|||-.-........ .....+.-..+|.+..+++.|. ..+.|+|-|-+.+..
T Consensus 40 ~~GIk~Va~D~DnTlI~~HsgG~~~~~--------~~~~~~~~~~tpefk~~~~~l~~~~I~v~VVTfSd~~~~~~~~~~ 111 (219)
T PTZ00445 40 ECGIKVIASDFDLTMITKHSGGYIDPD--------NDDIRVLTSVTPDFKILGKRLKNSNIKISVVTFSDKELIPSENRP 111 (219)
T ss_pred HcCCeEEEecchhhhhhhhcccccCCC--------cchhhhhccCCHHHHHHHHHHHHCCCeEEEEEccchhhccccCCc
Confidence 456789999999999863211111000 0011223456999999999998 679999999998744
Q ss_pred --------HHHHHHHhCCCCCceeE------EEeeceeee-----e---CCc--c--cccccccCCCCCcEEEEECChhh
Q 013017 339 --------AAQLLDILDPDGKLISR------RVYRESCIF-----S---DGT--Y--TKDLTVLGVDLAKVAIIDNSPQV 392 (451)
Q Consensus 339 --------Ad~ILd~LDP~~~lf~~------rL~Re~C~~-----~---~g~--y--iKDLs~LgrdlskvIIIDDsp~~ 392 (451)
++..|+.=.-+-+ +.. +++.+.-.+ . .+. | .+-++..|.+++.+++|||.+..
T Consensus 112 ~~Isg~~li~~~lk~s~~~~~-i~~~~~yyp~~w~~p~~y~~~gl~KPdp~iK~yHle~ll~~~gl~peE~LFIDD~~~N 190 (219)
T PTZ00445 112 RYISGDRMVEAALKKSKCDFK-IKKVYAYYPKFWQEPSDYRPLGLDAPMPLDKSYHLKQVCSDFNVNPDEILFIDDDMNN 190 (219)
T ss_pred ceechHHHHHHHHHhcCccce-eeeeeeeCCcccCChhhhhhhcccCCCccchHHHHHHHHHHcCCCHHHeEeecCCHHH
Confidence 5555554322211 111 111221111 1 122 4 45566779999999999999988
Q ss_pred hccCCCceeeecccc
Q 013017 393 FRLQVNNGIPIESWF 407 (451)
Q Consensus 393 ~~~qpeNgIpI~~f~ 407 (451)
......-|+...-+.
T Consensus 191 VeaA~~lGi~ai~f~ 205 (219)
T PTZ00445 191 CKNALKEGYIALHVT 205 (219)
T ss_pred HHHHHHCCCEEEEcC
Confidence 866555666554444
No 98
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=95.60 E-value=0.029 Score=52.24 Aligned_cols=54 Identities=28% Similarity=0.284 Sum_probs=45.4
Q ss_pred EEEecCcccccccccccCCCCceEEEEecceeeeEEEeeCccHHHHHHHhH-hccEEEEEcCCcHHHHHHHHHHhCCC
Q 013017 273 LVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPD 349 (451)
Q Consensus 273 LVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~yV~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~YAd~ILd~LDP~ 349 (451)
|++||||||+++... +-|...+.|+.+. +++.++|.|.-....+..++..+.-.
T Consensus 1 i~~DlDGTLl~~~~~-----------------------i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~ 55 (254)
T PF08282_consen 1 IFSDLDGTLLNSDGK-----------------------ISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGID 55 (254)
T ss_dssp EEEECCTTTCSTTSS-----------------------SCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHC
T ss_pred cEEEECCceecCCCe-----------------------eCHHHHHHHHhhcccceEEEEEccCcccccccccccccch
Confidence 689999999986422 3577888999888 88999999999999999999987654
No 99
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=95.45 E-value=0.024 Score=52.33 Aligned_cols=103 Identities=20% Similarity=0.261 Sum_probs=57.3
Q ss_pred eEEEEecCccccccccccc---CCCCceEEEEecceeeeEEEeeCccHHHHHHHhH-hccEEEEEcCCc-----------
Q 013017 271 VTLVLDLDETLVHSTLEYC---DDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQ----------- 335 (451)
Q Consensus 271 ktLVLDLDeTLVhSs~~~~---~~~df~~~v~~~~~~~~~yV~lRPgL~eFL~~Ls-k~YEIvVfTAs~----------- 335 (451)
|.+.|||||||+....... ...+ +..+-|++.+-|+++. +.|.|||+|.-.
T Consensus 1 Kia~fD~DgTLi~~~s~~~f~~~~~D--------------~~~~~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~ 66 (159)
T PF08645_consen 1 KIAFFDLDGTLIKTKSGKKFPKDPDD--------------WKFFPPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDL 66 (159)
T ss_dssp SEEEE-SCTTTEE-STSTTS-SSTCG--------------GEEC-TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHH
T ss_pred CEEEEeCCCCccCCCCCCcCcCCHHH--------------hhhcchhHHHHHHHHHhcCCeEEEEeCccccccccccchH
Confidence 4689999999998754211 1112 2445688999999999 689999999741
Q ss_pred ---HHHHHHHHHHhCCCCCceeEEEe-e--ceeeee-CCcccccccccC----CCCCcEEEEECChh
Q 013017 336 ---SIYAAQLLDILDPDGKLISRRVY-R--ESCIFS-DGTYTKDLTVLG----VDLAKVAIIDNSPQ 391 (451)
Q Consensus 336 ---~~YAd~ILd~LDP~~~lf~~rL~-R--e~C~~~-~g~yiKDLs~Lg----rdlskvIIIDDsp~ 391 (451)
....+.+++.|+.. + ..++ . +.|..- .|.+..-++.++ .|+++.++|=|...
T Consensus 67 ~~~~~ki~~il~~l~ip---~-~~~~a~~~d~~RKP~~GM~~~~~~~~~~~~~id~~~Sf~VGDaag 129 (159)
T PF08645_consen 67 ENFHEKIENILKELGIP---I-QVYAAPHKDPCRKPNPGMWEFALKDYNDGVEIDLANSFYVGDAAG 129 (159)
T ss_dssp HHHHHHHHHHHHHCTS----E-EEEECGCSSTTSTTSSHHHHHHCCCTSTT--S-CCC-EEEESSCH
T ss_pred HHHHHHHHHHHHHcCCc---e-EEEecCCCCCCCCCchhHHHHHHHhccccccccccceEEEeccCC
Confidence 13344555666332 2 2222 1 122211 234444344443 58999999998754
No 100
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=95.41 E-value=0.03 Score=53.35 Aligned_cols=126 Identities=19% Similarity=0.278 Sum_probs=84.1
Q ss_pred ceEEEEecCcccccccccccCCCCceEEEEecceeeeEEEeeCccHHHHHHHhH-hccEEEEEcCCc------------H
Q 013017 270 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQ------------S 336 (451)
Q Consensus 270 kktLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~yV~lRPgL~eFL~~Ls-k~YEIvVfTAs~------------~ 336 (451)
.++|+||.||||+--...... ... -..+.||+.+-|..+. ..|.+||+|.-+ .
T Consensus 5 ~k~lflDRDGtin~d~~~yv~-----------~~~---~~~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~ 70 (181)
T COG0241 5 QKALFLDRDGTINIDKGDYVD-----------SLD---DFQFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFD 70 (181)
T ss_pred CcEEEEcCCCceecCCCcccC-----------cHH---HhccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHH
Confidence 569999999999743210000 000 1456899999999997 679999999832 3
Q ss_pred HHHHHHHHHhCCCCCceeEEEeece-----eeeeC---CcccccccccCCCCCcEEEEECChhhhccCCCc---eeeecc
Q 013017 337 IYAAQLLDILDPDGKLISRRVYRES-----CIFSD---GTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNN---GIPIES 405 (451)
Q Consensus 337 ~YAd~ILd~LDP~~~lf~~rL~Re~-----C~~~~---g~yiKDLs~LgrdlskvIIIDDsp~~~~~qpeN---gIpI~~ 405 (451)
.+-..+++.|.-.+.-|+.+++..| |...+ |.+..-++..+.|+++.++|=|+..-..+.... ++.+..
T Consensus 71 ~~~~~m~~~l~~~gv~id~i~~Cph~p~~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~~~~~~~ 150 (181)
T COG0241 71 KLHNKMLKILASQGVKIDGILYCPHHPEDNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIKGVLVLT 150 (181)
T ss_pred HHHHHHHHHHHHcCCccceEEECCCCCCCCCcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCCceEEEc
Confidence 3444466777666667999998543 55443 466677778889999999999996543222211 555555
Q ss_pred ccCC
Q 013017 406 WFDD 409 (451)
Q Consensus 406 f~gd 409 (451)
|.+.
T Consensus 151 ~~~~ 154 (181)
T COG0241 151 GIGV 154 (181)
T ss_pred Cccc
Confidence 5543
No 101
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=95.38 E-value=0.048 Score=53.67 Aligned_cols=59 Identities=19% Similarity=0.252 Sum_probs=46.5
Q ss_pred CCceEEEEecCcccccccccccCCCCceEEEEecceeeeEEEeeCccHHHHHHHhH-hccEEEEEcCCcHHHHHHHHHHh
Q 013017 268 RKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDIL 346 (451)
Q Consensus 268 ~kkktLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~yV~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~YAd~ILd~L 346 (451)
+.++.+++||||||+++... .-|-..+.|+++. ++..++|.|.-....+..+++.|
T Consensus 5 ~~~~lI~~DlDGTLL~~~~~-----------------------i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l 61 (271)
T PRK03669 5 QDPLLIFTDLDGTLLDSHTY-----------------------DWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTL 61 (271)
T ss_pred CCCeEEEEeCccCCcCCCCc-----------------------CcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHh
Confidence 34678999999999985311 1244667788887 67999999999999999999999
Q ss_pred CCC
Q 013017 347 DPD 349 (451)
Q Consensus 347 DP~ 349 (451)
+..
T Consensus 62 ~~~ 64 (271)
T PRK03669 62 GLQ 64 (271)
T ss_pred CCC
Confidence 764
No 102
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=95.30 E-value=0.046 Score=51.64 Aligned_cols=57 Identities=16% Similarity=0.229 Sum_probs=47.0
Q ss_pred eEEEEecCcccccccccccCCCCceEEEEecceeeeEEEeeCccHHHHHHHhH-hccEEEEEcCCcHHHHHHHHHHhCCC
Q 013017 271 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPD 349 (451)
Q Consensus 271 ktLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~yV~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~YAd~ILd~LDP~ 349 (451)
+.+++||||||+.... .+-|...+-|+++. +++.+++.|.-....+..+++.|+..
T Consensus 2 k~v~~DlDGTLl~~~~-----------------------~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~ 58 (215)
T TIGR01487 2 KLVAIDIDGTLTEPNR-----------------------MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTS 58 (215)
T ss_pred cEEEEecCCCcCCCCc-----------------------ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCC
Confidence 4789999999996421 13677888899998 66999999999999999999999876
Q ss_pred C
Q 013017 350 G 350 (451)
Q Consensus 350 ~ 350 (451)
.
T Consensus 59 ~ 59 (215)
T TIGR01487 59 G 59 (215)
T ss_pred C
Confidence 4
No 103
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=95.29 E-value=0.046 Score=53.16 Aligned_cols=58 Identities=19% Similarity=0.201 Sum_probs=46.6
Q ss_pred ceEEEEecCcccccccccccCCCCceEEEEecceeeeEEEeeCccHHHHHHHhH-hccEEEEEcCCcHHHHHHHHHHhCC
Q 013017 270 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDP 348 (451)
Q Consensus 270 kktLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~yV~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~YAd~ILd~LDP 348 (451)
.+.+++||||||++... .+-|...+.|+++. +++.++|.|.-....+..+++.|..
T Consensus 3 ~kli~~DlDGTLl~~~~-----------------------~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~ 59 (270)
T PRK10513 3 IKLIAIDMDGTLLLPDH-----------------------TISPAVKQAIAAARAKGVNVVLTTGRPYAGVHRYLKELHM 59 (270)
T ss_pred eEEEEEecCCcCcCCCC-----------------------ccCHHHHHHHHHHHHCCCEEEEecCCChHHHHHHHHHhCC
Confidence 46899999999997631 12456678888888 6799999999999999999999876
Q ss_pred CC
Q 013017 349 DG 350 (451)
Q Consensus 349 ~~ 350 (451)
..
T Consensus 60 ~~ 61 (270)
T PRK10513 60 EQ 61 (270)
T ss_pred CC
Confidence 53
No 104
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=95.21 E-value=0.032 Score=47.69 Aligned_cols=50 Identities=22% Similarity=0.246 Sum_probs=35.6
Q ss_pred EEEecCcccccccccccCCCCceEEEEecceeeeEEEeeCccHHHHHHHhH-hccEEEEEcCCcHHHHHHHHHHh
Q 013017 273 LVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDIL 346 (451)
Q Consensus 273 LVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~yV~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~YAd~ILd~L 346 (451)
++||+||||++.. ..=||+.+||++|. ++..+++.|.++..-...+.++|
T Consensus 1 ~l~D~dGvl~~g~------------------------~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L 51 (101)
T PF13344_consen 1 FLFDLDGVLYNGN------------------------EPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKL 51 (101)
T ss_dssp EEEESTTTSEETT------------------------EE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHH
T ss_pred CEEeCccEeEeCC------------------------CcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHH
Confidence 5899999998742 12599999999999 56999999999744434444333
No 105
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=95.19 E-value=0.042 Score=52.19 Aligned_cols=94 Identities=10% Similarity=0.082 Sum_probs=62.0
Q ss_pred EEeeCccHHHHHHHhHh-ccEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEe--eceeeeeCC---c----------ccc
Q 013017 308 YVKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPDGKLISRRVY--RESCIFSDG---T----------YTK 371 (451)
Q Consensus 308 yV~lRPgL~eFL~~Lsk-~YEIvVfTAs~~~YAd~ILd~LDP~~~lf~~rL~--Re~C~~~~g---~----------yiK 371 (451)
.+.+|||+.+||+++.+ .+.++|.|++...|++++++.+.+...++..++. .+....... . ..+
T Consensus 68 ~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~K~~ 147 (214)
T TIGR03333 68 TAEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHIDWPHPCDGTCQNQCGCCKPS 147 (214)
T ss_pred cCcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEEeCCCCCccccccCCCCCHHH
Confidence 36789999999999995 6999999999999999999998654433432222 111111111 0 113
Q ss_pred cccccCCCCCcEEEEECChhhhccCCCcee
Q 013017 372 DLTVLGVDLAKVAIIDNSPQVFRLQVNNGI 401 (451)
Q Consensus 372 DLs~LgrdlskvIIIDDsp~~~~~qpeNgI 401 (451)
-++.++....++|.|-|+..-+..-...++
T Consensus 148 ~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~ 177 (214)
T TIGR03333 148 LIRKLSEPNDYHIVIGDSVTDVEAAKQSDL 177 (214)
T ss_pred HHHHHhhcCCcEEEEeCCHHHHHHHHhCCe
Confidence 334445567889999999976654333333
No 106
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=95.17 E-value=0.059 Score=52.18 Aligned_cols=58 Identities=24% Similarity=0.293 Sum_probs=45.5
Q ss_pred ceEEEEecCcccccccccccCCCCceEEEEecceeeeEEEeeCccHHHHHHHhH-hccEEEEEcCCcHHHHHHHHHHhCC
Q 013017 270 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDP 348 (451)
Q Consensus 270 kktLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~yV~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~YAd~ILd~LDP 348 (451)
.+.+++||||||+..... +-|...+-|+++. ++..++|.|.-....+..+++.|+.
T Consensus 3 ~kli~~DlDGTLl~~~~~-----------------------i~~~~~~ai~~~~~~G~~~~iaTGR~~~~~~~~~~~l~~ 59 (272)
T PRK10530 3 YRVIALDLDGTLLTPKKT-----------------------ILPESLEALARAREAGYKVIIVTGRHHVAIHPFYQALAL 59 (272)
T ss_pred ccEEEEeCCCceECCCCc-----------------------cCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCC
Confidence 468999999999975321 2455677788887 6799999999988888889998876
Q ss_pred CC
Q 013017 349 DG 350 (451)
Q Consensus 349 ~~ 350 (451)
..
T Consensus 60 ~~ 61 (272)
T PRK10530 60 DT 61 (272)
T ss_pred CC
Confidence 54
No 107
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=95.15 E-value=0.014 Score=56.38 Aligned_cols=89 Identities=10% Similarity=0.105 Sum_probs=65.2
Q ss_pred EeeCccHHHHHHHhHhccEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeeceeeeeCC---cccccccccCCCCCcEEE
Q 013017 309 VKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG---TYTKDLTVLGVDLAKVAI 385 (451)
Q Consensus 309 V~lRPgL~eFL~~Lsk~YEIvVfTAs~~~YAd~ILd~LDP~~~lf~~rL~Re~C~~~~g---~yiKDLs~LgrdlskvII 385 (451)
+..-||+.++|++|++.|.++|.|++... ++.++..+ +|+..+..+.....+. .|.+-++.+|.+++++|+
T Consensus 112 ~~~~~gv~~~L~~L~~~~~l~i~Tn~~~~-----~~~~gl~~-~fd~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~~~ 185 (238)
T PRK10748 112 IDVPQATHDTLKQLAKKWPLVAITNGNAQ-----PELFGLGD-YFEFVLRAGPHGRSKPFSDMYHLAAEKLNVPIGEILH 185 (238)
T ss_pred CCCCccHHHHHHHHHcCCCEEEEECCCch-----HHHCCcHH-hhceeEecccCCcCCCcHHHHHHHHHHcCCChhHEEE
Confidence 44558999999999988999999998765 35555543 8888887665544433 577888899999999999
Q ss_pred EECCh-hhhccCCCceeee
Q 013017 386 IDNSP-QVFRLQVNNGIPI 403 (451)
Q Consensus 386 IDDsp-~~~~~qpeNgIpI 403 (451)
|.|++ .-......+|+..
T Consensus 186 VGD~~~~Di~~A~~aG~~~ 204 (238)
T PRK10748 186 VGDDLTTDVAGAIRCGMQA 204 (238)
T ss_pred EcCCcHHHHHHHHHCCCeE
Confidence 99884 4443333456554
No 108
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=95.03 E-value=0.056 Score=52.30 Aligned_cols=53 Identities=19% Similarity=0.222 Sum_probs=43.4
Q ss_pred EEEecCcccccccccccCCCCceEEEEecceeeeEEEeeCccHHHHHHHhH-hccEEEEEcCCcHHHHHHHHHHhCCC
Q 013017 273 LVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPD 349 (451)
Q Consensus 273 LVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~yV~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~YAd~ILd~LDP~ 349 (451)
+++||||||++... .-|...++|+++. ++..+++.|.-+...+..+++.|+..
T Consensus 2 i~~DlDGTLl~~~~------------------------~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~ 55 (225)
T TIGR02461 2 IFTDLDGTLLPPGY------------------------EPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVE 55 (225)
T ss_pred EEEeCCCCCcCCCC------------------------CchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 68999999998421 1356889999998 56999999999988888899988754
No 109
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=95.01 E-value=0.08 Score=50.04 Aligned_cols=58 Identities=12% Similarity=0.208 Sum_probs=46.7
Q ss_pred ceEEEEecCcccccccccccCCCCceEEEEecceeeeEEEeeCccHHHHHHHhH-hccEEEEEcCCcHHHHHHHHHHhCC
Q 013017 270 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDP 348 (451)
Q Consensus 270 kktLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~yV~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~YAd~ILd~LDP 348 (451)
.+.+++||||||+.+.. .+.|...+-|+++. ++..++|.|.-....+.++++.+..
T Consensus 3 ~kli~~DlDGTLl~~~~-----------------------~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~ 59 (230)
T PRK01158 3 IKAIAIDIDGTITDKDR-----------------------RLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGT 59 (230)
T ss_pred eeEEEEecCCCcCCCCC-----------------------ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCC
Confidence 36889999999996521 13567788888888 6689999999999999999999876
Q ss_pred CC
Q 013017 349 DG 350 (451)
Q Consensus 349 ~~ 350 (451)
..
T Consensus 60 ~~ 61 (230)
T PRK01158 60 SG 61 (230)
T ss_pred CC
Confidence 54
No 110
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=94.96 E-value=0.07 Score=53.99 Aligned_cols=104 Identities=19% Similarity=0.308 Sum_probs=68.3
Q ss_pred EeeCccHHHHHHHhH-hccEEEEEcCCcHHHHHHHHHHhCCC---CCceeEEEee-c-eeeee-CC----cccc------
Q 013017 309 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPD---GKLISRRVYR-E-SCIFS-DG----TYTK------ 371 (451)
Q Consensus 309 V~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~YAd~ILd~LDP~---~~lf~~rL~R-e-~C~~~-~g----~yiK------ 371 (451)
+.+|||+.+||++|. ....++|+|+|...+++.+++.++.. ...++.++-- + .+... .+ .+.|
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG~~~P~i~~~~K~~~v~~ 199 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKGFKGPLIHTFNKNHDVAL 199 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeCCCCCcccccccHHHHHH
Confidence 778999999999997 66999999999999999999987643 2345555542 2 22111 11 1122
Q ss_pred -cccccC--CCCCcEEEEECChhhhcc-----CCCceeeeccccCCCCch
Q 013017 372 -DLTVLG--VDLAKVAIIDNSPQVFRL-----QVNNGIPIESWFDDPSDC 413 (451)
Q Consensus 372 -DLs~Lg--rdlskvIIIDDsp~~~~~-----qpeNgIpI~~f~gd~~D~ 413 (451)
....++ .++++||+|.|+..-..+ +.+|.|.| .|..+.-+.
T Consensus 200 ~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~i-gfln~~~e~ 248 (277)
T TIGR01544 200 RNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKI-GYLNDRVDE 248 (277)
T ss_pred HHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEE-EecccCHHH
Confidence 223345 688999999999975533 23444444 455544444
No 111
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=94.76 E-value=0.077 Score=51.93 Aligned_cols=57 Identities=18% Similarity=0.201 Sum_probs=45.5
Q ss_pred eEEEEecCcccccccccccCCCCceEEEEecceeeeEEEeeCccHHHHHHHhH-hccEEEEEcCCcHHHHHHHHHHhCCC
Q 013017 271 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPD 349 (451)
Q Consensus 271 ktLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~yV~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~YAd~ILd~LDP~ 349 (451)
+.+++||||||+.+.. .+-|...+-|+++. ++..++|.|.-....+..+++.++..
T Consensus 3 kli~~DlDGTLl~~~~-----------------------~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 59 (272)
T PRK15126 3 RLAAFDMDGTLLMPDH-----------------------HLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLD 59 (272)
T ss_pred cEEEEeCCCcCcCCCC-----------------------cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCC
Confidence 5889999999997531 13456678888888 67899999999999999999988775
Q ss_pred C
Q 013017 350 G 350 (451)
Q Consensus 350 ~ 350 (451)
.
T Consensus 60 ~ 60 (272)
T PRK15126 60 A 60 (272)
T ss_pred C
Confidence 4
No 112
>PRK10976 putative hydrolase; Provisional
Probab=94.76 E-value=0.077 Score=51.58 Aligned_cols=57 Identities=23% Similarity=0.244 Sum_probs=44.8
Q ss_pred eEEEEecCcccccccccccCCCCceEEEEecceeeeEEEeeCccHHHHHHHhH-hccEEEEEcCCcHHHHHHHHHHhCCC
Q 013017 271 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPD 349 (451)
Q Consensus 271 ktLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~yV~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~YAd~ILd~LDP~ 349 (451)
+.+++||||||+++... +-|...+-|+++. ++..++|.|.-....+.++++.|+..
T Consensus 3 kli~~DlDGTLl~~~~~-----------------------is~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 59 (266)
T PRK10976 3 QVVASDLDGTLLSPDHT-----------------------LSPYAKETLKLLTARGIHFVFATGRHHVDVGQIRDNLEIK 59 (266)
T ss_pred eEEEEeCCCCCcCCCCc-----------------------CCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCC
Confidence 58999999999976311 2455677788887 67999999999888888888888765
Q ss_pred C
Q 013017 350 G 350 (451)
Q Consensus 350 ~ 350 (451)
.
T Consensus 60 ~ 60 (266)
T PRK10976 60 S 60 (266)
T ss_pred C
Confidence 4
No 113
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=94.76 E-value=0.076 Score=51.42 Aligned_cols=55 Identities=25% Similarity=0.321 Sum_probs=44.7
Q ss_pred EEEecCcccccccccccCCCCceEEEEecceeeeEEEeeCccHHHHHHHhH-hccEEEEEcCCcHHHHHHHHHHhCCCC
Q 013017 273 LVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDG 350 (451)
Q Consensus 273 LVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~yV~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~YAd~ILd~LDP~~ 350 (451)
+++||||||++... .+.|...+.|+++. +++.++|.|......+..+++.+....
T Consensus 2 i~~DlDGTLl~~~~-----------------------~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~~ 57 (256)
T TIGR00099 2 IFIDLDGTLLNDDH-----------------------TISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLDT 57 (256)
T ss_pred EEEeCCCCCCCCCC-----------------------ccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCCC
Confidence 78999999997521 13567788888888 679999999999999999999887653
No 114
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=94.72 E-value=0.084 Score=49.87 Aligned_cols=54 Identities=22% Similarity=0.234 Sum_probs=43.5
Q ss_pred EEEecCcccccccccccCCCCceEEEEecceeeeEEEeeCccHHHHHHHhH-hccEEEEEcCCcHHHHHHHHHHhCCC
Q 013017 273 LVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPD 349 (451)
Q Consensus 273 LVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~yV~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~YAd~ILd~LDP~ 349 (451)
+++||||||+++... .-|-..+.|+.+. ++..++|.|......+..+++.+...
T Consensus 2 i~~DlDGTLL~~~~~-----------------------~~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 2 VFSDLDGTLLDSHSY-----------------------DWQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred EEEeCCCCCcCCCCC-----------------------CcHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 789999999976311 1222678999988 56999999999999999999998754
No 115
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=94.71 E-value=0.03 Score=60.39 Aligned_cols=129 Identities=19% Similarity=0.262 Sum_probs=75.5
Q ss_pred CCCceEEEEecCcccccccccccCCCCceEEEEecc-eeeeEEEeeCccHHHHHHHhH-hccEEEEEcCCcHHHHHHHHH
Q 013017 267 GRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNM-KEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLD 344 (451)
Q Consensus 267 ~~kkktLVLDLDeTLVhSs~~~~~~~df~~~v~~~~-~~~~~yV~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~YAd~ILd 344 (451)
...+++||||||+||.--..- .+=.-.+.... ....-| =-+++|...+. +++=++|.|-....-|..+..
T Consensus 219 g~~kK~LVLDLDNTLWGGVIG----edGv~GI~Ls~~~~G~~f----k~fQ~~Ik~l~kqGVlLav~SKN~~~da~evF~ 290 (574)
T COG3882 219 GKSKKALVLDLDNTLWGGVIG----EDGVDGIRLSNSAEGEAF----KTFQNFIKGLKKQGVLLAVCSKNTEKDAKEVFR 290 (574)
T ss_pred CcccceEEEecCCcccccccc----cccccceeecCCCCchhH----HHHHHHHHHHHhccEEEEEecCCchhhHHHHHh
Confidence 456789999999999654321 11000111110 000000 01566777777 788999999999999998876
Q ss_pred HhCCCCCceeEEEeec-----eeeee-CC-cccccccccCCCCCcEEEEECChhhhccCCCce-eeeccccCC
Q 013017 345 ILDPDGKLISRRVYRE-----SCIFS-DG-TYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNG-IPIESWFDD 409 (451)
Q Consensus 345 ~LDP~~~lf~~rL~Re-----~C~~~-~g-~yiKDLs~LgrdlskvIIIDDsp~~~~~qpeNg-IpI~~f~gd 409 (451)
+- |+ ..|--+ .|.+. ++ +..|-.++|+..+.-.|+|||+|.....-..++ |.+.+|-.|
T Consensus 291 kh-p~-----MiLkeedfa~~~iNW~~K~eNirkIAkklNlg~dSmvFiDD~p~ErE~vk~~~~v~Vi~~~~D 357 (574)
T COG3882 291 KH-PD-----MILKEEDFAVFQINWDPKAENIRKIAKKLNLGLDSMVFIDDNPAERELVKRELPVSVIEFPED 357 (574)
T ss_pred hC-CC-----eEeeHhhhhhheecCCcchhhHHHHHHHhCCCccceEEecCCHHHHHHHHhcCceeeccCCCC
Confidence 63 21 122212 23222 22 456777889999999999999997664432222 555555433
No 116
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=94.42 E-value=0.14 Score=48.23 Aligned_cols=97 Identities=20% Similarity=0.279 Sum_probs=65.2
Q ss_pred cCCCCceEEEEecCcccccccccccCCCCceEEEEecceeeeEEEeeCccHHHHHHHhHhcc---EEEEEcCC-------
Q 013017 265 TQGRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMF---EVVIFTAS------- 334 (451)
Q Consensus 265 ~~~~kkktLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~yV~lRPgL~eFL~~Lsk~Y---EIvVfTAs------- 334 (451)
.+..+-+.||||+|+||+.-.. -..-|-+.+.++++.+.| .|+|+|.+
T Consensus 36 Lk~~Gik~li~DkDNTL~~~~~----------------------~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~ 93 (168)
T PF09419_consen 36 LKKKGIKALIFDKDNTLTPPYE----------------------DEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDP 93 (168)
T ss_pred hhhcCceEEEEcCCCCCCCCCc----------------------CcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCc
Confidence 3467788999999999975321 124678889999999665 39999998
Q ss_pred cHHHHHHHHHHhCCCCCceeEEEeeceeeeeCCcccccccccC-----CCCCcEEEEECChh
Q 013017 335 QSIYAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLG-----VDLAKVAIIDNSPQ 391 (451)
Q Consensus 335 ~~~YAd~ILd~LDP~~~lf~~rL~Re~C~~~~g~yiKDLs~Lg-----rdlskvIIIDDsp~ 391 (451)
...-|+.+-+.|... .|.|+ +. ..+.+.+-++.++ ..++.+++|-|+..
T Consensus 94 ~~~~a~~~~~~lgIp--vl~h~-----~k-KP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~ 147 (168)
T PF09419_consen 94 DGERAEALEKALGIP--VLRHR-----AK-KPGCFREILKYFKCQKVVTSPSEIAVIGDRLF 147 (168)
T ss_pred cHHHHHHHHHhhCCc--EEEeC-----CC-CCccHHHHHHHHhhccCCCCchhEEEEcchHH
Confidence 367788888888743 23222 11 2233333333333 35899999999873
No 117
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=94.16 E-value=0.11 Score=47.83 Aligned_cols=62 Identities=15% Similarity=0.181 Sum_probs=42.5
Q ss_pred EEEecCcccccccccccCCCCceEEEEecceeeeEEEeeCccHHHHHHHhH-hccEEEEEcCCcHHHHH---HHHHHh
Q 013017 273 LVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAA---QLLDIL 346 (451)
Q Consensus 273 LVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~yV~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~YAd---~ILd~L 346 (451)
+++|+||||+.+.....-. ...... ...|++.++++++. +.|.+++.|+.....+. ..+..+
T Consensus 2 VisDIDGTL~~sd~~~~~~---------~~~~~~---~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~ 67 (157)
T smart00775 2 VISDIDGTITKSDVLGHVV---------PIIGKD---WTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQI 67 (157)
T ss_pred EEEecCCCCcccccccccc---------cccccC---cCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHh
Confidence 7899999999874211000 000001 24799999999999 67999999998877765 566553
No 118
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=93.92 E-value=0.13 Score=46.27 Aligned_cols=83 Identities=17% Similarity=0.312 Sum_probs=57.1
Q ss_pred EeeCccHHHHHHHhH-hccEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeecee-eee-------------CCccccc-
Q 013017 309 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESC-IFS-------------DGTYTKD- 372 (451)
Q Consensus 309 V~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~YAd~ILd~LDP~~~lf~~rL~Re~C-~~~-------------~g~yiKD- 372 (451)
+.++||+.++|+++. +.+.++|.|++...|++++++.++... +|..++.-+.. .+. ++..++.
T Consensus 72 ~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~-~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~l~~~ 150 (177)
T TIGR01488 72 VALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDD-VFANRLEFDDNGLLTGPIEGQVNPEGECKGKVLKEL 150 (177)
T ss_pred CCcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCch-heeeeEEECCCCEEeCccCCcccCCcchHHHHHHHH
Confidence 567999999999997 669999999999999999999998764 66655543211 000 0111222
Q ss_pred ccccCCCCCcEEEEECChhh
Q 013017 373 LTVLGVDLAKVAIIDNSPQV 392 (451)
Q Consensus 373 Ls~LgrdlskvIIIDDsp~~ 392 (451)
+..+|.++.+++.|-|+..-
T Consensus 151 ~~~~~~~~~~~~~iGDs~~D 170 (177)
T TIGR01488 151 LEESKITLKKIIAVGDSVND 170 (177)
T ss_pred HHHhCCCHHHEEEEeCCHHH
Confidence 22345667778888887653
No 119
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=93.87 E-value=0.14 Score=48.04 Aligned_cols=54 Identities=17% Similarity=0.227 Sum_probs=42.4
Q ss_pred EEEecCcccccccccccCCCCceEEEEecceeeeEEEeeCccHHHHHHHhH-hccEEEEEcCCcHHHHHHHHHHhCCC
Q 013017 273 LVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPD 349 (451)
Q Consensus 273 LVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~yV~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~YAd~ILd~LDP~ 349 (451)
+++||||||+++.. .+.|-..+-|+++. ++..+++.|.-....+..+++.|...
T Consensus 1 i~~DlDGTLl~~~~-----------------------~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~ 55 (225)
T TIGR01482 1 IASDIDGTLTDPNR-----------------------AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTP 55 (225)
T ss_pred CeEeccCccCCCCc-----------------------ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCC
Confidence 57999999997631 12456677788887 66999999999988889999888743
No 120
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=93.81 E-value=0.17 Score=49.26 Aligned_cols=54 Identities=24% Similarity=0.184 Sum_probs=43.6
Q ss_pred EEEecCcccccccccccCCCCceEEEEecceeeeEEEeeCccHHHHHHHhH-hccEEEEEcCCcHHHHHHHHHHhCCC
Q 013017 273 LVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPD 349 (451)
Q Consensus 273 LVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~yV~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~YAd~ILd~LDP~ 349 (451)
+++||||||++.... ..|...++|+++. ++..+++.|.-....+..+++.++..
T Consensus 2 i~~DlDGTll~~~~~-----------------------~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~ 56 (256)
T TIGR01486 2 IFTDLDGTLLDPHGY-----------------------DWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLE 56 (256)
T ss_pred EEEcCCCCCcCCCCc-----------------------CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 789999999986420 1235789999998 56999999999999999999998754
No 121
>PTZ00174 phosphomannomutase; Provisional
Probab=93.54 E-value=0.18 Score=49.14 Aligned_cols=53 Identities=21% Similarity=0.269 Sum_probs=39.0
Q ss_pred CceEEEEecCcccccccccccCCCCceEEEEecceeeeEEEeeCccHHHHHHHhH-hccEEEEEcCCcHHHHHHHHH
Q 013017 269 KSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLD 344 (451)
Q Consensus 269 kkktLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~yV~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~YAd~ILd 344 (451)
+.+.+++||||||+++... +-|...+-|+++. ++..++|.|.-...-+...+.
T Consensus 4 ~~klia~DlDGTLL~~~~~-----------------------is~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~l~ 57 (247)
T PTZ00174 4 KKTILLFDVDGTLTKPRNP-----------------------ITQEMKDTLAKLKSKGFKIGVVGGSDYPKIKEQLG 57 (247)
T ss_pred CCeEEEEECcCCCcCCCCC-----------------------CCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHh
Confidence 3578999999999987421 2466778888888 668999999876664544444
No 122
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=93.28 E-value=0.17 Score=47.08 Aligned_cols=54 Identities=31% Similarity=0.358 Sum_probs=43.1
Q ss_pred EEEEecCcccccccccccCCCCceEEEEecceeeeEEEeeCccHHHHHHHhHh-ccEEEEEcCCcHHHHHHHHHHhC
Q 013017 272 TLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILD 347 (451)
Q Consensus 272 tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~yV~lRPgL~eFL~~Lsk-~YEIvVfTAs~~~YAd~ILd~LD 347 (451)
.+++|+||||+.... ....|.+.+.|++|.+ ...++|.|......+..+++.++
T Consensus 1 li~~D~DgTL~~~~~----------------------~~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 1 LLFFDLDGTLLDPNA----------------------HELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred CEEEeCcCCCcCCCC----------------------CcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 378999999997420 0135888999999984 48999999999999999998753
No 123
>PRK10444 UMP phosphatase; Provisional
Probab=92.87 E-value=0.15 Score=50.33 Aligned_cols=53 Identities=23% Similarity=0.366 Sum_probs=41.9
Q ss_pred eEEEEecCcccccccccccCCCCceEEEEecceeeeEEEeeCccHHHHHHHhH-hccEEEEEcCCcHHHHHHHHHHhC
Q 013017 271 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILD 347 (451)
Q Consensus 271 ktLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~yV~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~YAd~ILd~LD 347 (451)
+.++|||||||++.. ..-||..+||++|. +...+++.|.....-...+.++|.
T Consensus 2 ~~v~~DlDGtL~~~~------------------------~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~ 55 (248)
T PRK10444 2 KNVICDIDGVLMHDN------------------------VAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFA 55 (248)
T ss_pred cEEEEeCCCceEeCC------------------------eeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHH
Confidence 478999999998763 12589999999998 579999999988766666666653
No 124
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=92.87 E-value=0.18 Score=51.36 Aligned_cols=54 Identities=15% Similarity=0.217 Sum_probs=42.3
Q ss_pred eEEEEecCcccccccccccCCCCceEEEEecceeeeEEEeeCccHHHHHHHhHh-----ccEEEEEcCCc----HHHHHH
Q 013017 271 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-----MFEVVIFTASQ----SIYAAQ 341 (451)
Q Consensus 271 ktLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~yV~lRPgL~eFL~~Lsk-----~YEIvVfTAs~----~~YAd~ 341 (451)
+.++||+||||+++.. .-|++.+||+.|.. .+.++++|... +.+++.
T Consensus 1 ~~~ifD~DGvL~~g~~------------------------~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~ 56 (321)
T TIGR01456 1 FGFAFDIDGVLFRGKK------------------------PIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEE 56 (321)
T ss_pred CEEEEeCcCceECCcc------------------------ccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHH
Confidence 3689999999998741 26899999999995 78999999764 567777
Q ss_pred HHHHhCC
Q 013017 342 LLDILDP 348 (451)
Q Consensus 342 ILd~LDP 348 (451)
+.+.++.
T Consensus 57 l~~~lG~ 63 (321)
T TIGR01456 57 ISSLLGV 63 (321)
T ss_pred HHHHcCC
Confidence 7666643
No 125
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=92.70 E-value=0.17 Score=46.91 Aligned_cols=84 Identities=24% Similarity=0.287 Sum_probs=58.2
Q ss_pred eeCccHHHHHHHhH-hccEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEee-ceeeee---CC--c--------cccccc
Q 013017 310 KQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYR-ESCIFS---DG--T--------YTKDLT 374 (451)
Q Consensus 310 ~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~YAd~ILd~LDP~~~lf~~rL~R-e~C~~~---~g--~--------yiKDLs 374 (451)
..+|++.++|+++. +.+.++|.|++...+++.+++.++... +|..++.. ++=.+. .| . +..-+.
T Consensus 87 ~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~-~~~~~l~~~~~g~~~g~~~~~~~~g~~K~~~l~~~~~ 165 (202)
T TIGR01490 87 ILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDN-AIGTRLEESEDGIYTGNIDGNNCKGEGKVHALAELLA 165 (202)
T ss_pred hccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcc-eEecceEEcCCCEEeCCccCCCCCChHHHHHHHHHHH
Confidence 46999999999998 579999999999999999999998875 66664432 210111 11 0 111123
Q ss_pred ccCCCCCcEEEEECChhhhc
Q 013017 375 VLGVDLAKVAIIDNSPQVFR 394 (451)
Q Consensus 375 ~LgrdlskvIIIDDsp~~~~ 394 (451)
..+.+++.++.+-|++.-..
T Consensus 166 ~~~~~~~~~~~~gDs~~D~~ 185 (202)
T TIGR01490 166 EEQIDLKDSYAYGDSISDLP 185 (202)
T ss_pred HcCCCHHHcEeeeCCcccHH
Confidence 34667788888888886543
No 126
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=92.62 E-value=0.15 Score=50.40 Aligned_cols=51 Identities=18% Similarity=0.312 Sum_probs=43.7
Q ss_pred EeeCccHHHHHHHhH---hccEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeec
Q 013017 309 VKQRPHLKTFLERVA---EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRE 360 (451)
Q Consensus 309 V~lRPgL~eFL~~Ls---k~YEIvVfTAs~~~YAd~ILd~LDP~~~lf~~rL~Re 360 (451)
+...||..+|++.++ ..++++|-|-+..-|.+.+|++-+... +|+.+++-.
T Consensus 70 ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~-~f~~I~TNp 123 (234)
T PF06888_consen 70 IPIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRD-CFSEIFTNP 123 (234)
T ss_pred CCCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCcc-ccceEEeCC
Confidence 778999999999995 489999999999999999999998875 676655543
No 127
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=92.61 E-value=0.33 Score=49.80 Aligned_cols=57 Identities=12% Similarity=0.168 Sum_probs=44.8
Q ss_pred eEEEEecCcccccccccccCCCCceEEEEecceeeeEEEeeCccHHHHHHHhH-hccEEEEEcCCcHHHHHHHHHHhCCC
Q 013017 271 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPD 349 (451)
Q Consensus 271 ktLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~yV~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~YAd~ILd~LDP~ 349 (451)
+.+++||||||++.... .-+-+.+-|++|. +...|++.|+-+..-...+.+.|...
T Consensus 2 KLIftDLDGTLLd~~~~-----------------------~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~ 58 (302)
T PRK12702 2 RLVLSSLDGSLLDLEFN-----------------------SYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLE 58 (302)
T ss_pred cEEEEeCCCCCcCCCCc-----------------------CCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCC
Confidence 57899999999985321 1234677888888 67999999999988888899998765
Q ss_pred C
Q 013017 350 G 350 (451)
Q Consensus 350 ~ 350 (451)
.
T Consensus 59 ~ 59 (302)
T PRK12702 59 H 59 (302)
T ss_pred C
Confidence 4
No 128
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=92.32 E-value=0.18 Score=50.06 Aligned_cols=41 Identities=20% Similarity=0.222 Sum_probs=33.1
Q ss_pred eEEEEecCcccccccccccCCCCceEEEEecceeeeEEEeeCccHHHHHHHhH-hccEEEEEcCCc
Q 013017 271 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQ 335 (451)
Q Consensus 271 ktLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~yV~lRPgL~eFL~~Ls-k~YEIvVfTAs~ 335 (451)
+.+++|+||||++... .-||+.++|++|. ++..+++.|+++
T Consensus 3 ~~~~~D~DGtl~~~~~------------------------~~~ga~e~l~~L~~~g~~~~~~Tnns 44 (279)
T TIGR01452 3 QGFIFDCDGVLWLGER------------------------VVPGAPELLDRLARAGKAALFVTNNS 44 (279)
T ss_pred cEEEEeCCCceEcCCe------------------------eCcCHHHHHHHHHHCCCeEEEEeCCC
Confidence 4789999999987521 2588999999999 578999999854
No 129
>PLN02645 phosphoglycolate phosphatase
Probab=92.22 E-value=0.19 Score=50.86 Aligned_cols=53 Identities=15% Similarity=0.066 Sum_probs=39.6
Q ss_pred CceEEEEecCcccccccccccCCCCceEEEEecceeeeEEEeeCccHHHHHHHhH-hccEEEEEcCCcHHHHHHHHHH
Q 013017 269 KSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDI 345 (451)
Q Consensus 269 kkktLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~yV~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~YAd~ILd~ 345 (451)
+.++++||+||||++... .=||+.++|+++. +...+++.|.....-...+++.
T Consensus 27 ~~~~~~~D~DGtl~~~~~------------------------~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~ 80 (311)
T PLN02645 27 SVETFIFDCDGVIWKGDK------------------------LIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKK 80 (311)
T ss_pred hCCEEEEeCcCCeEeCCc------------------------cCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHH
Confidence 345899999999987521 1389999999998 6899999999874444444433
No 130
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=92.16 E-value=0.19 Score=50.01 Aligned_cols=101 Identities=17% Similarity=0.176 Sum_probs=67.4
Q ss_pred EeeCccHHHHHHHhH-hccEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeec---------------eeeeeCCc----
Q 013017 309 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRE---------------SCIFSDGT---- 368 (451)
Q Consensus 309 V~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~YAd~ILd~LDP~~~lf~~rL~Re---------------~C~~~~g~---- 368 (451)
...-|.+.++++.+. ++..++..|+....+...-++.|---|--|+...+++ .-.+.+|.
T Consensus 80 ~lie~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~~gi~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~GIlft~ 159 (252)
T PF11019_consen 80 ELIESDVPNIINSLQNKGIPVIALTARGPNMEDWTLRELKSLGIDFSSSSFPEDGIISFPVFDSALSRAPSFYDGILFTG 159 (252)
T ss_pred EEcchhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHHCCCCccccccccCcceecccccCCCCCCceeecCeEEeC
Confidence 556789999999999 7799999999999999988888643332232222111 11122331
Q ss_pred -------ccccccccCCCCCcEEEEECChhhhc----cCCCceeeeccccCC
Q 013017 369 -------YTKDLTVLGVDLAKVAIIDNSPQVFR----LQVNNGIPIESWFDD 409 (451)
Q Consensus 369 -------yiKDLs~LgrdlskvIIIDDsp~~~~----~qpeNgIpI~~f~gd 409 (451)
...=|..+|..++++|+|||+..... .-...+|....|+..
T Consensus 160 ~~~KG~~L~~fL~~~~~~pk~IIfIDD~~~nl~sv~~a~k~~~I~f~G~~Yt 211 (252)
T PF11019_consen 160 GQDKGEVLKYFLDKINQSPKKIIFIDDNKENLKSVEKACKKSGIDFIGFHYT 211 (252)
T ss_pred CCccHHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHHHhhCCCcEEEEEEc
Confidence 22335677999999999999997651 122377777776543
No 131
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=92.12 E-value=0.19 Score=49.56 Aligned_cols=58 Identities=17% Similarity=0.128 Sum_probs=39.4
Q ss_pred eEEEEecCcccccccccccCCCCceEEEEecceeeeEEEeeCccHHHHHHHhH-hccEEEEEcCCcHH---HHHHHHHHh
Q 013017 271 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSI---YAAQLLDIL 346 (451)
Q Consensus 271 ktLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~yV~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~---YAd~ILd~L 346 (451)
++++|||||||++..... . ..=|+..++|+++. ++..+++.|..+.. .....++.+
T Consensus 2 k~i~~D~DGtl~~~~~~~-~-------------------~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~ 61 (257)
T TIGR01458 2 KGVLLDISGVLYISDAKS-G-------------------VAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRL 61 (257)
T ss_pred CEEEEeCCCeEEeCCCcc-c-------------------CcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHc
Confidence 378999999998763200 0 02589999999999 67999999975443 233334445
Q ss_pred CC
Q 013017 347 DP 348 (451)
Q Consensus 347 DP 348 (451)
+.
T Consensus 62 g~ 63 (257)
T TIGR01458 62 GF 63 (257)
T ss_pred CC
Confidence 43
No 132
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=91.91 E-value=0.36 Score=47.95 Aligned_cols=60 Identities=15% Similarity=0.072 Sum_probs=43.5
Q ss_pred ceEEEEecCcccccccccccCCCCceEEEEecceeeeEEEeeCccHHHHHHHhHh--ccEEEEEcCCcHHHHHHHHHHhC
Q 013017 270 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE--MFEVVIFTASQSIYAAQLLDILD 347 (451)
Q Consensus 270 kktLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~yV~lRPgL~eFL~~Lsk--~YEIvVfTAs~~~YAd~ILd~LD 347 (451)
+..+++|+||||+.....+.. ...-|.+.+-|+.|.+ ...++|.|.-...-+..++..++
T Consensus 14 ~~li~~D~DGTLl~~~~~p~~------------------~~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~ 75 (266)
T PRK10187 14 NYAWFFDLDGTLAEIKPHPDQ------------------VVVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYR 75 (266)
T ss_pred CEEEEEecCCCCCCCCCCccc------------------ccCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCccc
Confidence 578999999999975322111 1234788888999985 57888999888887777775543
No 133
>PLN02887 hydrolase family protein
Probab=91.55 E-value=0.41 Score=53.14 Aligned_cols=59 Identities=22% Similarity=0.201 Sum_probs=47.0
Q ss_pred CCceEEEEecCcccccccccccCCCCceEEEEecceeeeEEEeeCccHHHHHHHhH-hccEEEEEcCCcHHHHHHHHHHh
Q 013017 268 RKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDIL 346 (451)
Q Consensus 268 ~kkktLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~yV~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~YAd~ILd~L 346 (451)
.+.+.+++||||||+++... +-|...+-|+++. ++..++|.|.-...-+..+++.|
T Consensus 306 ~~iKLIa~DLDGTLLn~d~~-----------------------Is~~t~eAI~kl~ekGi~~vIATGR~~~~i~~~l~~L 362 (580)
T PLN02887 306 PKFSYIFCDMDGTLLNSKSQ-----------------------ISETNAKALKEALSRGVKVVIATGKARPAVIDILKMV 362 (580)
T ss_pred cCccEEEEeCCCCCCCCCCc-----------------------cCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh
Confidence 35678999999999976321 2456677888888 77999999999999898999988
Q ss_pred CCC
Q 013017 347 DPD 349 (451)
Q Consensus 347 DP~ 349 (451)
+..
T Consensus 363 ~l~ 365 (580)
T PLN02887 363 DLA 365 (580)
T ss_pred Ccc
Confidence 754
No 134
>COG4502 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism]
Probab=91.54 E-value=0.43 Score=44.36 Aligned_cols=84 Identities=19% Similarity=0.262 Sum_probs=48.4
Q ss_pred EeeCccHHHHHHHhHhccEEEEEcCCcHH--HHHHHHHHhCCCCCce--eEEEeeceeeeeCCcccccccccCCCCCcEE
Q 013017 309 VKQRPHLKTFLERVAEMFEVVIFTASQSI--YAAQLLDILDPDGKLI--SRRVYRESCIFSDGTYTKDLTVLGVDLAKVA 384 (451)
Q Consensus 309 V~lRPgL~eFL~~Lsk~YEIvVfTAs~~~--YAd~ILd~LDP~~~lf--~~rL~Re~C~~~~g~yiKDLs~LgrdlskvI 384 (451)
...-||.++-+++|-++|+|+|.||++.. -.+.-.+.|--.-.++ ++.+++. . |++-+. =|
T Consensus 67 L~V~p~aq~v~keLt~~y~vYivtaamdhp~s~~dK~eWl~E~FPFi~~qn~vfCg-----n----Knivka------Di 131 (180)
T COG4502 67 LGVQPFAQTVLKELTSIYNVYIVTAAMDHPKSCEDKGEWLKEKFPFISYQNIVFCG-----N----KNIVKA------DI 131 (180)
T ss_pred cCccccHHHHHHHHHhhheEEEEEeccCCchhHHHHHHHHHHHCCCCChhhEEEec-----C----CCeEEe------eE
Confidence 56689999999999999999999999432 2232222221110111 1223321 1 222111 36
Q ss_pred EEECChhhhccCCCceeeecccc
Q 013017 385 IIDNSPQVFRLQVNNGIPIESWF 407 (451)
Q Consensus 385 IIDDsp~~~~~qpeNgIpI~~f~ 407 (451)
+|||.|........|-|.-..-+
T Consensus 132 lIDDnp~nLE~F~G~kIlFdA~H 154 (180)
T COG4502 132 LIDDNPLNLENFKGNKILFDAHH 154 (180)
T ss_pred EecCCchhhhhccCceEEEeccc
Confidence 89999977766556666544443
No 135
>PLN02423 phosphomannomutase
Probab=91.25 E-value=0.48 Score=46.44 Aligned_cols=53 Identities=21% Similarity=0.351 Sum_probs=35.9
Q ss_pred ceEEEEecCcccccccccccCCCCceEEEEecceeeeEEEeeCccHHHHHHHhHhccEEEEEcCCcHHHHHHHHHHhCC
Q 013017 270 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDP 348 (451)
Q Consensus 270 kktLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~yV~lRPgL~eFL~~Lsk~YEIvVfTAs~~~YAd~ILd~LDP 348 (451)
+..+++||||||+.+... +-|...+.|++|.+...+++.|..... .+.+.+.+
T Consensus 7 ~~i~~~D~DGTLl~~~~~-----------------------i~~~~~~ai~~l~~~i~fviaTGR~~~---~~~~~~~~ 59 (245)
T PLN02423 7 GVIALFDVDGTLTAPRKE-----------------------ATPEMLEFMKELRKVVTVGVVGGSDLS---KISEQLGK 59 (245)
T ss_pred ceEEEEeccCCCcCCCCc-----------------------CCHHHHHHHHHHHhCCEEEEECCcCHH---HHHHHhcc
Confidence 445669999999976421 246677889999977777777775332 44445544
No 136
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=90.79 E-value=0.79 Score=51.85 Aligned_cols=60 Identities=17% Similarity=0.074 Sum_probs=46.8
Q ss_pred CCCceEEEEecCcccccccccccCCCCceEEEEecceeeeEEEeeCccHHHHHHHhH-hccEEEEEcCCcHHHHHHHHHH
Q 013017 267 GRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDI 345 (451)
Q Consensus 267 ~~kkktLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~yV~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~YAd~ILd~ 345 (451)
.++++.+++||||||++.... +. +...+-|+.+. ++..+++.|.-....+..+++.
T Consensus 413 ~~~~KLIfsDLDGTLLd~d~~---------------------i~--~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~ 469 (694)
T PRK14502 413 GQFKKIVYTDLDGTLLNPLTY---------------------SY--STALDALRLLKDKELPLVFCSAKTMGEQDLYRNE 469 (694)
T ss_pred CceeeEEEEECcCCCcCCCCc---------------------cC--HHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHH
Confidence 567889999999999986321 11 23456788887 6799999999999999999999
Q ss_pred hCCC
Q 013017 346 LDPD 349 (451)
Q Consensus 346 LDP~ 349 (451)
|+..
T Consensus 470 Lgl~ 473 (694)
T PRK14502 470 LGIK 473 (694)
T ss_pred cCCC
Confidence 8764
No 137
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=90.04 E-value=0.44 Score=46.71 Aligned_cols=55 Identities=20% Similarity=0.296 Sum_probs=38.7
Q ss_pred eEEEEecCcccccccccccCCCCceEEEEecceeeeEEEeeCccHHHHHHHhH-hccEEEEEcCC---cHHHHHHHHHHh
Q 013017 271 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTAS---QSIYAAQLLDIL 346 (451)
Q Consensus 271 ktLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~yV~lRPgL~eFL~~Ls-k~YEIvVfTAs---~~~YAd~ILd~L 346 (451)
..++|||||||++... .-|+..++|+++. ++..+++.|.+ +..-....++.+
T Consensus 2 ~~~~~D~DGtl~~~~~------------------------~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~ 57 (249)
T TIGR01457 2 KGYLIDLDGTMYKGKE------------------------RIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASF 57 (249)
T ss_pred CEEEEeCCCceEcCCe------------------------eCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHc
Confidence 3789999999987521 1378999999998 67889999853 234444455556
Q ss_pred CCC
Q 013017 347 DPD 349 (451)
Q Consensus 347 DP~ 349 (451)
+..
T Consensus 58 g~~ 60 (249)
T TIGR01457 58 DIP 60 (249)
T ss_pred CCC
Confidence 543
No 138
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=89.46 E-value=0.72 Score=48.12 Aligned_cols=52 Identities=19% Similarity=0.260 Sum_probs=44.2
Q ss_pred EEEeeCccHHHHHHHhH-hccEEEEEcCCcHHHHHHHHHHh-C------CCCCceeEEEe
Q 013017 307 VYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDIL-D------PDGKLISRRVY 358 (451)
Q Consensus 307 ~yV~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~YAd~ILd~L-D------P~~~lf~~rL~ 358 (451)
-||.+-||+.++|+++. +.+.+.|.|++...|++.+++.+ + ....+|+.++.
T Consensus 181 ~yv~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~yFD~IIt 240 (343)
T TIGR02244 181 KYVLRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDYFDVVIV 240 (343)
T ss_pred HHhccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhhCcEEEe
Confidence 46888999999999998 67999999999999999999997 5 23457776655
No 139
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=88.96 E-value=0.73 Score=44.71 Aligned_cols=61 Identities=25% Similarity=0.073 Sum_probs=41.7
Q ss_pred ceEEEEecCcccccccccccCCCCceEEEEecceeeeEEEeeCccHHHHHHHhHhcc-EEEEEcCCcHHHHHHHHHHhCC
Q 013017 270 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMF-EVVIFTASQSIYAAQLLDILDP 348 (451)
Q Consensus 270 kktLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~yV~lRPgL~eFL~~Lsk~Y-EIvVfTAs~~~YAd~ILd~LDP 348 (451)
++.++.||||||+.+.... -...|.+.+.++.+.+.. .+++.|.-+..-+..+++.+.+
T Consensus 1 ~~li~tDlDGTLl~~~~~~--------------------~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~ 60 (249)
T TIGR01485 1 RLLLVSDLDNTLVDHTDGD--------------------NQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPL 60 (249)
T ss_pred CeEEEEcCCCcCcCCCCCC--------------------hHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCC
Confidence 3578899999999642100 123588888888887544 7777777777777777776665
Q ss_pred CC
Q 013017 349 DG 350 (451)
Q Consensus 349 ~~ 350 (451)
..
T Consensus 61 ~~ 62 (249)
T TIGR01485 61 LT 62 (249)
T ss_pred CC
Confidence 43
No 140
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=88.72 E-value=0.36 Score=48.31 Aligned_cols=66 Identities=23% Similarity=0.257 Sum_probs=36.3
Q ss_pred CCCceEEEEecCccccccccccc----CCCCceEEEEecceeeeEEEeeCccHHHHHHHhHhccEEEEEcC
Q 013017 267 GRKSVTLVLDLDETLVHSTLEYC----DDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTA 333 (451)
Q Consensus 267 ~~kkktLVLDLDeTLVhSs~~~~----~~~df~~~v~~~~~~~~~yV~lRPgL~eFL~~Lsk~YEIvVfTA 333 (451)
..|++.+|+|||||+++-+.... ....|+ +-.|+.-...---+.-||+.+||+++-++--.+.|-+
T Consensus 76 k~K~~aVvlDlDETvLdNs~Yqgy~v~nnk~f~-pe~Wd~wV~a~~sk~vpGA~eFl~Yvn~~Gg~ifyiS 145 (274)
T COG2503 76 KGKKKAVVLDLDETVLDNSAYQGYQVLNNKGFT-PETWDKWVQAKKSKAVPGAVEFLNYVNSNGGKIFYIS 145 (274)
T ss_pred cCCCceEEEecchHhhcCccccchhhhcCCCCC-ccchHHHHhhcccccCccHHHHHHHHHhcCcEEEEEe
Confidence 45566999999999998763211 111111 0000000000114557999999999996544444433
No 141
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=88.66 E-value=0.58 Score=47.27 Aligned_cols=56 Identities=23% Similarity=0.223 Sum_probs=41.0
Q ss_pred CceEEEEecCcccccccccccCCCCceEEEEecceeeeEEEeeCccHHHHHHHhH-hccEEEEEcCCcHH----HHHHHH
Q 013017 269 KSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSI----YAAQLL 343 (451)
Q Consensus 269 kkktLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~yV~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~----YAd~IL 343 (451)
+..+++|||||||++... .=||+.+||++|. +.-.+++-|.++.. |+.++.
T Consensus 7 ~y~~~l~DlDGvl~~G~~------------------------~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~ 62 (269)
T COG0647 7 KYDGFLFDLDGVLYRGNE------------------------AIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLS 62 (269)
T ss_pred hcCEEEEcCcCceEeCCc------------------------cCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHH
Confidence 345789999999987632 3599999999999 55888888888654 555555
Q ss_pred HHhCC
Q 013017 344 DILDP 348 (451)
Q Consensus 344 d~LDP 348 (451)
....+
T Consensus 63 ~~~~~ 67 (269)
T COG0647 63 SLGGV 67 (269)
T ss_pred hhcCC
Confidence 53444
No 142
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=87.52 E-value=1.3 Score=43.79 Aligned_cols=92 Identities=13% Similarity=0.086 Sum_probs=53.0
Q ss_pred CCceEEEEecCccccccccccc----CCCCceEEEEecceeeeEEEeeCccHHHHHHHhH-hccEEEEEcCCcHHHHHHH
Q 013017 268 RKSVTLVLDLDETLVHSTLEYC----DDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQL 342 (451)
Q Consensus 268 ~kkktLVLDLDeTLVhSs~~~~----~~~df~~~v~~~~~~~~~yV~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~YAd~I 342 (451)
.++..+|||+|+|++....... ....|.- ..|+.-...---..-|++.+|++++. ++++|++.|.-........
T Consensus 75 dg~~A~V~DIDET~LsN~py~~~~~~g~~~~~~-~~~~~wv~~~~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T 153 (229)
T TIGR01675 75 DGMDAWIFDVDDTLLSNIPYYKKHGYGTEKTDP-TAFWLWLGKGAAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNAT 153 (229)
T ss_pred CCCcEEEEccccccccCHHHHHHhccCCCcCCH-HHHHHHHHcCCCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHH
Confidence 5778999999999998763111 0000100 00000000001345799999999997 7899999999887774444
Q ss_pred HHHhCCCCCc-eeEEEeec
Q 013017 343 LDILDPDGKL-ISRRVYRE 360 (451)
Q Consensus 343 Ld~LDP~~~l-f~~rL~Re 360 (451)
++.|.-.|-. +++.+.|.
T Consensus 154 ~~nL~~~G~~~~~~LiLR~ 172 (229)
T TIGR01675 154 LDNLINAGFTGWKHLILRG 172 (229)
T ss_pred HHHHHHcCCCCcCeeeecC
Confidence 4444333300 24555564
No 143
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=86.76 E-value=1.3 Score=48.62 Aligned_cols=85 Identities=16% Similarity=0.138 Sum_probs=57.8
Q ss_pred EeeCccHHHHHHHhH-hccEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeeceeeeeCCcccccccccCCCCCcEEEEE
Q 013017 309 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIID 387 (451)
Q Consensus 309 V~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~YAd~ILd~LDP~~~lf~~rL~Re~C~~~~g~yiKDLs~LgrdlskvIIID 387 (451)
-..||++.++|++|. ..++++|.|...+.+|+.+++.++.+ +|. +.....+...++. +....++++.|-
T Consensus 404 d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~--~~~-----~~~p~~K~~~v~~---l~~~~~~v~~VG 473 (562)
T TIGR01511 404 DQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN--VRA-----EVLPDDKAALIKE---LQEKGRVVAMVG 473 (562)
T ss_pred ccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc--EEc-----cCChHHHHHHHHH---HHHcCCEEEEEe
Confidence 567999999999998 56999999999999999999999774 222 1100111223333 334567899999
Q ss_pred CChhhhccCCCceeee
Q 013017 388 NSPQVFRLQVNNGIPI 403 (451)
Q Consensus 388 Dsp~~~~~qpeNgIpI 403 (451)
|...-...-...++.|
T Consensus 474 Dg~nD~~al~~A~vgi 489 (562)
T TIGR01511 474 DGINDAPALAQADVGI 489 (562)
T ss_pred CCCccHHHHhhCCEEE
Confidence 9876553322233443
No 144
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=86.26 E-value=0.92 Score=44.04 Aligned_cols=51 Identities=25% Similarity=0.335 Sum_probs=38.4
Q ss_pred EEEecCcccccccccccCCCCceEEEEecceeeeEEEeeCccHHHHHHHhH-hccEEEEEcCC----cHHHHHHHHHHhC
Q 013017 273 LVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTAS----QSIYAAQLLDILD 347 (451)
Q Consensus 273 LVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~yV~lRPgL~eFL~~Ls-k~YEIvVfTAs----~~~YAd~ILd~LD 347 (451)
++||+||||+.... .=|++.++|+.+. +.+.+++.|.+ ...+++.+.++++
T Consensus 1 ~lfD~DGvL~~~~~------------------------~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g 56 (236)
T TIGR01460 1 FLFDIDGVLWLGHK------------------------PIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLG 56 (236)
T ss_pred CEEeCcCccCcCCc------------------------cCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcC
Confidence 47999999988631 1468999999998 46999999844 4567777777544
No 145
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=85.29 E-value=2.2 Score=41.42 Aligned_cols=41 Identities=15% Similarity=0.310 Sum_probs=37.4
Q ss_pred EeeCccHHHHHHHhH-hccEEEEEcCCcHHHHHHHHHHhCCC
Q 013017 309 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPD 349 (451)
Q Consensus 309 V~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~YAd~ILd~LDP~ 349 (451)
+++|||.++|.+++. +.-.++|-|+|+..|..+++..+--+
T Consensus 72 i~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgk 113 (220)
T COG4359 72 IKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGK 113 (220)
T ss_pred cccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccc
Confidence 889999999999999 56899999999999999999988644
No 146
>PLN02151 trehalose-phosphatase
Probab=85.09 E-value=1.6 Score=45.74 Aligned_cols=60 Identities=15% Similarity=0.187 Sum_probs=45.3
Q ss_pred CCCceEEEEecCcccccccccccCCCCceEEEEecceeeeEEEeeCccHHHHHHHhHhccEEEEEcCCcHHHHHHHHH
Q 013017 267 GRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLD 344 (451)
Q Consensus 267 ~~kkktLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~yV~lRPgL~eFL~~Lsk~YEIvVfTAs~~~YAd~ILd 344 (451)
..++..|+||+||||+--...+ -.+..-|.+.+-|+.|++.+.++|-|.-...-.+.++.
T Consensus 95 ~~~~~ll~lDyDGTL~PIv~~P------------------~~A~~~~~~~~aL~~La~~~~vaIvSGR~~~~l~~~~~ 154 (354)
T PLN02151 95 EGKQIVMFLDYDGTLSPIVDDP------------------DRAFMSKKMRNTVRKLAKCFPTAIVSGRCREKVSSFVK 154 (354)
T ss_pred cCCceEEEEecCccCCCCCCCc------------------ccccCCHHHHHHHHHHhcCCCEEEEECCCHHHHHHHcC
Confidence 3467899999999998432111 11345789999999999989999999888877777664
No 147
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=84.98 E-value=1.1 Score=41.02 Aligned_cols=80 Identities=19% Similarity=0.180 Sum_probs=59.6
Q ss_pred EEeeCccHHHHHHHhHh-ccEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeecee-eeeCCcccccccccCCCCCcEEE
Q 013017 308 YVKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESC-IFSDGTYTKDLTVLGVDLAKVAI 385 (451)
Q Consensus 308 yV~lRPgL~eFL~~Lsk-~YEIvVfTAs~~~YAd~ILd~LDP~~~lf~~rL~Re~C-~~~~g~yiKDLs~LgrdlskvII 385 (451)
.-.+||++.++|++|.+ ++.++|.|......|..+.+.++... ..++.+.. .-.+..+.+-++.|+.+++.|+.
T Consensus 125 ~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~----~~v~a~~~~kP~~k~~~~~i~~l~~~~~~v~~ 200 (215)
T PF00702_consen 125 RDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFD----SIVFARVIGKPEPKIFLRIIKELQVKPGEVAM 200 (215)
T ss_dssp EEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCS----EEEEESHETTTHHHHHHHHHHHHTCTGGGEEE
T ss_pred cCcchhhhhhhhhhhhccCcceeeeecccccccccccccccccc----ccccccccccccchhHHHHHHHHhcCCCEEEE
Confidence 35679999999999995 59999999999999999999998743 23332221 10111345666778888889999
Q ss_pred EECChh
Q 013017 386 IDNSPQ 391 (451)
Q Consensus 386 IDDsp~ 391 (451)
|-|...
T Consensus 201 vGDg~n 206 (215)
T PF00702_consen 201 VGDGVN 206 (215)
T ss_dssp EESSGG
T ss_pred EccCHH
Confidence 999873
No 148
>PLN03017 trehalose-phosphatase
Probab=84.03 E-value=1.9 Score=45.40 Aligned_cols=60 Identities=18% Similarity=0.207 Sum_probs=44.0
Q ss_pred CCCceEEEEecCcccccccccccCCCCceEEEEecceeeeEEEeeCccHHHHHHHhHhccEEEEEcCCcHHHHHHHHH
Q 013017 267 GRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLD 344 (451)
Q Consensus 267 ~~kkktLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~yV~lRPgL~eFL~~Lsk~YEIvVfTAs~~~YAd~ILd 344 (451)
..++..|+||+||||+--...+ + ....-|.+.+-|++|++.+.++|.|--...-+..++.
T Consensus 108 ~~k~~llflD~DGTL~Piv~~p----~--------------~a~i~~~~~~aL~~La~~~~vaIvSGR~~~~l~~~~~ 167 (366)
T PLN03017 108 RGKQIVMFLDYDGTLSPIVDDP----D--------------KAFMSSKMRRTVKKLAKCFPTAIVTGRCIDKVYNFVK 167 (366)
T ss_pred cCCCeEEEEecCCcCcCCcCCc----c--------------cccCCHHHHHHHHHHhcCCcEEEEeCCCHHHHHHhhc
Confidence 3466889999999998322110 0 0134588899999999999999999988887777743
No 149
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=83.52 E-value=0.76 Score=45.68 Aligned_cols=81 Identities=14% Similarity=0.019 Sum_probs=64.1
Q ss_pred EeeCccHHHHHHHhH-hccEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeeceeeeeC---CcccccccccCCCCCcEE
Q 013017 309 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGVDLAKVA 384 (451)
Q Consensus 309 V~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~YAd~ILd~LDP~~~lf~~rL~Re~C~~~~---g~yiKDLs~LgrdlskvI 384 (451)
....|-+ ++|+.+. +.+.|.|.|....++= .++..++.. .+|++.+..-.....+ ..|.+.|.++|..|+.+|
T Consensus 113 ~~~~~~~-~~lq~lR~~g~~l~iisN~d~r~~-~~l~~~~l~-~~fD~vv~S~e~g~~KPDp~If~~al~~l~v~Pee~v 189 (237)
T KOG3085|consen 113 KYLDGMQ-ELLQKLRKKGTILGIISNFDDRLR-LLLLPLGLS-AYFDFVVESCEVGLEKPDPRIFQLALERLGVKPEECV 189 (237)
T ss_pred eeccHHH-HHHHHHHhCCeEEEEecCCcHHHH-HHhhccCHH-HhhhhhhhhhhhccCCCChHHHHHHHHHhCCChHHeE
Confidence 3444445 9999999 7789999999988877 788888777 4898887733323333 378999999999999999
Q ss_pred EEECChhh
Q 013017 385 IIDNSPQV 392 (451)
Q Consensus 385 IIDDsp~~ 392 (451)
.|||....
T Consensus 190 hIgD~l~n 197 (237)
T KOG3085|consen 190 HIGDLLEN 197 (237)
T ss_pred EecCcccc
Confidence 99999976
No 150
>PLN02580 trehalose-phosphatase
Probab=83.26 E-value=2.2 Score=45.25 Aligned_cols=61 Identities=20% Similarity=0.226 Sum_probs=47.0
Q ss_pred CCCceEEEEecCcccccccccccCCCCceEEEEecceeeeEEEeeCccHHHHHHHhHhccEEEEEcCCcHHHHHHHHHH
Q 013017 267 GRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDI 345 (451)
Q Consensus 267 ~~kkktLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~yV~lRPgL~eFL~~Lsk~YEIvVfTAs~~~YAd~ILd~ 345 (451)
..++..|+||.||||.--...+ --+..-|++.+-|+.|++.+.++|-|.-...-.+.++..
T Consensus 116 ~~k~~~LfLDyDGTLaPIv~~P------------------d~A~~s~~~~~aL~~La~~~~VAIVSGR~~~~L~~~l~~ 176 (384)
T PLN02580 116 KGKKIALFLDYDGTLSPIVDDP------------------DRALMSDAMRSAVKNVAKYFPTAIISGRSRDKVYELVGL 176 (384)
T ss_pred hcCCeEEEEecCCccCCCCCCc------------------ccccCCHHHHHHHHHHhhCCCEEEEeCCCHHHHHHHhCC
Confidence 4467899999999997533211 114456899999999999999999999988888777753
No 151
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=82.74 E-value=1.2 Score=43.39 Aligned_cols=48 Identities=19% Similarity=0.171 Sum_probs=32.5
Q ss_pred CceEEEEecCcccccccccccCCCCceEEEEecceeeeEEEeeCccHHHHHHHhHhccEEE--EEcCC
Q 013017 269 KSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVV--IFTAS 334 (451)
Q Consensus 269 kkktLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~yV~lRPgL~eFL~~Lsk~YEIv--VfTAs 334 (451)
|+..|+||+||||+.....+. ....=|++.+.|+.|.+....+ |-|.-
T Consensus 2 ~~~~l~lD~DGTL~~~~~~p~------------------~~~~~~~~~~~L~~L~~~~~~~v~ivSGR 51 (244)
T TIGR00685 2 RKRAFFFDYDGTLSEIVPDPD------------------AAVVSDRLLTILQKLAARPHNAIWIISGR 51 (244)
T ss_pred CcEEEEEecCccccCCcCCCc------------------ccCCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 567899999999986422111 1234688999999999775544 55544
No 152
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=82.34 E-value=0.57 Score=46.43 Aligned_cols=48 Identities=19% Similarity=0.396 Sum_probs=39.1
Q ss_pred EeeCccHHHHHHHhHh--ccEEEEEcCCcHHHHHHHHHHhCCCCCceeEEE
Q 013017 309 VKQRPHLKTFLERVAE--MFEVVIFTASQSIYAAQLLDILDPDGKLISRRV 357 (451)
Q Consensus 309 V~lRPgL~eFL~~Lsk--~YEIvVfTAs~~~YAd~ILd~LDP~~~lf~~rL 357 (451)
+..-||+-+.++.+++ .||++|-|-+..-..+.+|++.+... +|+.++
T Consensus 83 iP~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d-~F~~If 132 (256)
T KOG3120|consen 83 IPIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHD-LFSEIF 132 (256)
T ss_pred CCCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHH-HHHHHh
Confidence 6678999999999984 38999999999999999999987643 444333
No 153
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=81.13 E-value=3.2 Score=41.96 Aligned_cols=60 Identities=20% Similarity=0.172 Sum_probs=45.5
Q ss_pred CCCceEEEEecCcccccccccccCCCCceEEEEecceeeeEEEeeCccHHHHHHHhHhccE--EEEEcCCcHHHHHHHHH
Q 013017 267 GRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFE--VVIFTASQSIYAAQLLD 344 (451)
Q Consensus 267 ~~kkktLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~yV~lRPgL~eFL~~Lsk~YE--IvVfTAs~~~YAd~ILd 344 (451)
..++.+++||.||||++....+.. +..=+++.+.|..|+..+. ++|.|.-+..-.+..+.
T Consensus 15 ~a~~~~~~lDyDGTl~~i~~~p~~------------------a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~ 76 (266)
T COG1877 15 NARKRLLFLDYDGTLTEIVPHPEA------------------AVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFG 76 (266)
T ss_pred cccceEEEEeccccccccccCccc------------------cCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcC
Confidence 456779999999999987644321 2345788999999998888 77778777777777666
No 154
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=81.07 E-value=1.1 Score=41.80 Aligned_cols=80 Identities=24% Similarity=0.333 Sum_probs=43.1
Q ss_pred EeeCccHHHHHHHhHhc-cEEEEEcCCcHH-------HHHHHHHHhCCCCCceeEEEeeceeeeeCCcccccccccCCCC
Q 013017 309 VKQRPHLKTFLERVAEM-FEVVIFTASQSI-------YAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDL 380 (451)
Q Consensus 309 V~lRPgL~eFL~~Lsk~-YEIvVfTAs~~~-------YAd~ILd~LDP~~~lf~~rL~Re~C~~~~g~yiKDLs~Lgrdl 380 (451)
...-||+.+.|++|.+. +++++.|+.... .-...|+..-|.- .....++..+ |. .++.|
T Consensus 72 l~p~~gA~e~l~~L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl~~hf~~i-~~~~~~~~~~---------K~--~v~~D- 138 (191)
T PF06941_consen 72 LPPIPGAVEALKKLRDKGHEIVIITARPPEFPDHSAEEKREWLERHFPFI-PYDNLIFTGD---------KT--LVGGD- 138 (191)
T ss_dssp --B-TTHHHHHHHHHTSTTEEEEEEE-SSSSGCCCHHHHHHHHHHHHTHH-HHCCEEEESS---------GG--GC--S-
T ss_pred CCccHHHHHHHHHHHHcCCcEEEEEecCccccchHHHHHHHHHHHHcCCC-chheEEEecC---------CC--eEecc-
Confidence 56679999999999965 688877777543 1223333332211 1222232211 22 24443
Q ss_pred CcEEEEECChhhhccCCCceeeec
Q 013017 381 AKVAIIDNSPQVFRLQVNNGIPIE 404 (451)
Q Consensus 381 skvIIIDDsp~~~~~qpeNgIpI~ 404 (451)
|+|||++.....-...|+++.
T Consensus 139 ---vlIDD~~~n~~~~~~~g~~~i 159 (191)
T PF06941_consen 139 ---VLIDDRPHNLEQFANAGIPVI 159 (191)
T ss_dssp ---EEEESSSHHHSS-SSESSEEE
T ss_pred ---EEecCChHHHHhccCCCceEE
Confidence 899999998876666775543
No 155
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=81.05 E-value=0.21 Score=48.78 Aligned_cols=74 Identities=16% Similarity=0.197 Sum_probs=43.5
Q ss_pred CCceEEEEecCcccccccccc---------cCCCCceEEEEecceeeeEEEeeCccHHHHHHHhH-hccEEEEEcCCcHH
Q 013017 268 RKSVTLVLDLDETLVHSTLEY---------CDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSI 337 (451)
Q Consensus 268 ~kkktLVLDLDeTLVhSs~~~---------~~~~df~~~v~~~~~~~~~yV~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~ 337 (451)
.++..+|||+||||+...... ....++.- +-.... -..=||..+|++++. ++++|++-|.-...
T Consensus 70 ~~~~avv~DIDeTvLsn~~y~~~~~~~~~~~~~~~w~~---wv~~~~---~~aip~a~~l~~~~~~~G~~V~~iT~R~~~ 143 (229)
T PF03767_consen 70 DKPPAVVFDIDETVLSNSPYYAYLIFGGESFSPEDWDE---WVASGK---APAIPGALELYNYARSRGVKVFFITGRPES 143 (229)
T ss_dssp TSEEEEEEESBTTTEEHHHHHHHHHHHTHHH-CCHHHH---HHHCTG---GEEETTHHHHHHHHHHTTEEEEEEEEEETT
T ss_pred CCCcEEEEECCcccccCHHHHHHHhhccCCCChHHHHH---HHhccc---CcccHHHHHHHHHHHHCCCeEEEEecCCch
Confidence 567899999999999654210 01111100 000000 144689999999999 67999988875544
Q ss_pred ---HHHHHHHHhC
Q 013017 338 ---YAAQLLDILD 347 (451)
Q Consensus 338 ---YAd~ILd~LD 347 (451)
....-|...+
T Consensus 144 ~r~~T~~nL~~~G 156 (229)
T PF03767_consen 144 QREATEKNLKKAG 156 (229)
T ss_dssp CHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHcC
Confidence 3334444444
No 156
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=80.97 E-value=0.69 Score=43.00 Aligned_cols=14 Identities=36% Similarity=0.648 Sum_probs=12.8
Q ss_pred EEEEecCccccccc
Q 013017 272 TLVLDLDETLVHST 285 (451)
Q Consensus 272 tLVLDLDeTLVhSs 285 (451)
.++|||||||++|.
T Consensus 2 ~viFD~DGTLiDs~ 15 (197)
T TIGR01548 2 ALVLDMDGVMADVS 15 (197)
T ss_pred ceEEecCceEEech
Confidence 58999999999996
No 157
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=80.45 E-value=2.9 Score=45.77 Aligned_cols=78 Identities=14% Similarity=0.089 Sum_probs=57.1
Q ss_pred EeeCccHHHHHHHhH-hc-cEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeeceeeeeCCcccccccccCCCCCcEEEE
Q 013017 309 VKQRPHLKTFLERVA-EM-FEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAII 386 (451)
Q Consensus 309 V~lRPgL~eFL~~Ls-k~-YEIvVfTAs~~~YAd~ILd~LDP~~~lf~~rL~Re~C~~~~g~yiKDLs~LgrdlskvIII 386 (451)
...|||+.+.|++|. ++ ++++|.|...+.+|+.+++.++... +|... .. ..+... +..++....+++.|
T Consensus 383 d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~-~f~~~-~p----~~K~~~---v~~l~~~~~~v~~v 453 (556)
T TIGR01525 383 DQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDE-VHAEL-LP----EDKLAI---VKELQEEGGVVAMV 453 (556)
T ss_pred ccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCe-eeccC-CH----HHHHHH---HHHHHHcCCEEEEE
Confidence 567999999999998 56 9999999999999999999998864 45421 10 011222 33344456689999
Q ss_pred ECChhhhcc
Q 013017 387 DNSPQVFRL 395 (451)
Q Consensus 387 DDsp~~~~~ 395 (451)
-|...-...
T Consensus 454 GDg~nD~~a 462 (556)
T TIGR01525 454 GDGINDAPA 462 (556)
T ss_pred ECChhHHHH
Confidence 999865533
No 158
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=79.22 E-value=6.5 Score=39.30 Aligned_cols=58 Identities=19% Similarity=0.224 Sum_probs=41.8
Q ss_pred ceEEEEecCcccccccccccCCCCceEEEEecceeeeEEEeeCccHHHHHHHhH-hccEEEEEcCCcHHHHHHHHHHhCC
Q 013017 270 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDP 348 (451)
Q Consensus 270 kktLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~yV~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~YAd~ILd~LDP 348 (451)
.+.+++|||+|||....+.-+ +...|.++. .+|+|+..|+-++.-...+-+.|+.
T Consensus 7 ~~lIFtDlD~TLl~~~ye~~p------------------------A~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v 62 (274)
T COG3769 7 PLLIFTDLDGTLLPHSYEWQP------------------------AAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGV 62 (274)
T ss_pred ceEEEEcccCcccCCCCCCCc------------------------cchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCC
Confidence 457788999999984332211 123455565 7899999999988877788888988
Q ss_pred CCC
Q 013017 349 DGK 351 (451)
Q Consensus 349 ~~~ 351 (451)
.+.
T Consensus 63 ~~~ 65 (274)
T COG3769 63 QGL 65 (274)
T ss_pred CCC
Confidence 753
No 159
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=78.65 E-value=1.2 Score=41.77 Aligned_cols=15 Identities=33% Similarity=0.731 Sum_probs=13.5
Q ss_pred eEEEEecCccccccc
Q 013017 271 VTLVLDLDETLVHST 285 (451)
Q Consensus 271 ktLVLDLDeTLVhSs 285 (451)
++++|||||||+++.
T Consensus 3 ~~viFDlDGTL~ds~ 17 (221)
T TIGR02253 3 KAIFFDLDDTLIDTS 17 (221)
T ss_pred eEEEEeCCCCCcCCC
Confidence 479999999999986
No 160
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=78.42 E-value=1.2 Score=43.11 Aligned_cols=16 Identities=19% Similarity=0.165 Sum_probs=13.9
Q ss_pred ceEEEEecCccccccc
Q 013017 270 SVTLVLDLDETLVHST 285 (451)
Q Consensus 270 kktLVLDLDeTLVhSs 285 (451)
.++++||+||||+.+.
T Consensus 2 ~k~viFD~DGTLiDs~ 17 (253)
T TIGR01422 2 IEAVIFDWAGTTVDFG 17 (253)
T ss_pred ceEEEEeCCCCeecCC
Confidence 3589999999999974
No 161
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=78.05 E-value=1.1 Score=40.60 Aligned_cols=15 Identities=20% Similarity=0.576 Sum_probs=13.6
Q ss_pred eEEEEecCccccccc
Q 013017 271 VTLVLDLDETLVHST 285 (451)
Q Consensus 271 ktLVLDLDeTLVhSs 285 (451)
++++||+||||+.+.
T Consensus 2 ~~iiFD~DGTL~ds~ 16 (185)
T TIGR02009 2 KAVIFDMDGVIVDTA 16 (185)
T ss_pred CeEEEcCCCcccCCh
Confidence 478999999999996
No 162
>PRK11590 hypothetical protein; Provisional
Probab=77.80 E-value=1.3 Score=42.15 Aligned_cols=39 Identities=18% Similarity=0.066 Sum_probs=35.0
Q ss_pred EeeCccHHHHH-HHhH-hccEEEEEcCCcHHHHHHHHHHhC
Q 013017 309 VKQRPHLKTFL-ERVA-EMFEVVIFTASQSIYAAQLLDILD 347 (451)
Q Consensus 309 V~lRPgL~eFL-~~Ls-k~YEIvVfTAs~~~YAd~ILd~LD 347 (451)
+..+||+.+.| +.+. +++.++|.|++...|+++++..+.
T Consensus 94 ~~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~ 134 (211)
T PRK11590 94 VTAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTP 134 (211)
T ss_pred CcCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcc
Confidence 45689999999 5677 689999999999999999999977
No 163
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=77.78 E-value=1.3 Score=43.48 Aligned_cols=16 Identities=19% Similarity=0.173 Sum_probs=14.1
Q ss_pred ceEEEEecCccccccc
Q 013017 270 SVTLVLDLDETLVHST 285 (451)
Q Consensus 270 kktLVLDLDeTLVhSs 285 (451)
.++++|||||||+++.
T Consensus 4 ~k~vIFDlDGTLiDs~ 19 (267)
T PRK13478 4 IQAVIFDWAGTTVDFG 19 (267)
T ss_pred eEEEEEcCCCCeecCC
Confidence 4689999999999984
No 164
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=76.66 E-value=1.4 Score=42.56 Aligned_cols=16 Identities=38% Similarity=0.551 Sum_probs=13.9
Q ss_pred ceEEEEecCccccccc
Q 013017 270 SVTLVLDLDETLVHST 285 (451)
Q Consensus 270 kktLVLDLDeTLVhSs 285 (451)
-+.++|||||||+++.
T Consensus 10 ~k~iiFDlDGTL~D~~ 25 (238)
T PRK10748 10 ISALTFDLDDTLYDNR 25 (238)
T ss_pred ceeEEEcCcccccCCh
Confidence 3589999999999984
No 165
>PRK11590 hypothetical protein; Provisional
Probab=76.30 E-value=4.1 Score=38.70 Aligned_cols=17 Identities=29% Similarity=0.421 Sum_probs=14.0
Q ss_pred CceEEEEecCccccccc
Q 013017 269 KSVTLVLDLDETLVHST 285 (451)
Q Consensus 269 kkktLVLDLDeTLVhSs 285 (451)
++++++|||||||++..
T Consensus 5 ~~k~~iFD~DGTL~~~d 21 (211)
T PRK11590 5 ERRVVFFDLDGTLHQQD 21 (211)
T ss_pred cceEEEEecCCCCcccc
Confidence 45699999999999654
No 166
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=76.22 E-value=1.3 Score=41.09 Aligned_cols=14 Identities=21% Similarity=0.211 Sum_probs=12.7
Q ss_pred EEEEecCccccccc
Q 013017 272 TLVLDLDETLVHST 285 (451)
Q Consensus 272 tLVLDLDeTLVhSs 285 (451)
.|+|||||||+.+.
T Consensus 2 ~viFDlDGTL~d~~ 15 (203)
T TIGR02252 2 LITFDAVGTLLALK 15 (203)
T ss_pred eEEEecCCceeeeC
Confidence 68999999999975
No 167
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=76.07 E-value=4.7 Score=45.69 Aligned_cols=62 Identities=23% Similarity=0.222 Sum_probs=45.1
Q ss_pred CCCceEEEEecCcccccccccccCCCCceEEEEecceeeeEEEeeCccHHHHHHHhHh--ccEEEEEcCCcHHHHHHHHH
Q 013017 267 GRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE--MFEVVIFTASQSIYAAQLLD 344 (451)
Q Consensus 267 ~~kkktLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~yV~lRPgL~eFL~~Lsk--~YEIvVfTAs~~~YAd~ILd 344 (451)
..++..++||+||||+.....+. ....-|.+.+.|+.|.+ ...|+|.|.-.....+..+.
T Consensus 489 ~~~~rLi~~D~DGTL~~~~~~~~------------------~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~ 550 (726)
T PRK14501 489 AASRRLLLLDYDGTLVPFAPDPE------------------LAVPDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFG 550 (726)
T ss_pred hccceEEEEecCccccCCCCCcc------------------cCCCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhC
Confidence 35677999999999996421110 01235788999999996 78999999998887777665
Q ss_pred Hh
Q 013017 345 IL 346 (451)
Q Consensus 345 ~L 346 (451)
.+
T Consensus 551 ~~ 552 (726)
T PRK14501 551 DL 552 (726)
T ss_pred CC
Confidence 43
No 168
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=75.84 E-value=2.4 Score=46.28 Aligned_cols=79 Identities=14% Similarity=0.102 Sum_probs=58.7
Q ss_pred EEeeCccHHHHHHHhH-hcc-EEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeeceeeeeCCcccccccccCCCCCcEEE
Q 013017 308 YVKQRPHLKTFLERVA-EMF-EVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAI 385 (451)
Q Consensus 308 yV~lRPgL~eFL~~Ls-k~Y-EIvVfTAs~~~YAd~ILd~LDP~~~lf~~rL~Re~C~~~~g~yiKDLs~LgrdlskvII 385 (451)
....|||+.+.|++|. +++ +++|.|+..+.+|+.+++.++..+ +|..... ..-.+-++.++...+.++.
T Consensus 360 ~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~-~f~~~~p--------~~K~~~i~~l~~~~~~v~~ 430 (536)
T TIGR01512 360 SDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDE-VHAELLP--------EDKLEIVKELREKYGPVAM 430 (536)
T ss_pred eccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChh-hhhccCc--------HHHHHHHHHHHhcCCEEEE
Confidence 3567999999999999 568 999999999999999999998865 4432111 1112334455566689999
Q ss_pred EECChhhhcc
Q 013017 386 IDNSPQVFRL 395 (451)
Q Consensus 386 IDDsp~~~~~ 395 (451)
|-|...-...
T Consensus 431 vGDg~nD~~a 440 (536)
T TIGR01512 431 VGDGINDAPA 440 (536)
T ss_pred EeCCHHHHHH
Confidence 9999865543
No 169
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=75.04 E-value=1.6 Score=43.83 Aligned_cols=18 Identities=28% Similarity=0.381 Sum_probs=15.5
Q ss_pred CCceEEEEecCccccccc
Q 013017 268 RKSVTLVLDLDETLVHST 285 (451)
Q Consensus 268 ~kkktLVLDLDeTLVhSs 285 (451)
.+-+++||||||||+++.
T Consensus 38 ~~~k~VIFDlDGTLvDS~ 55 (286)
T PLN02779 38 ALPEALLFDCDGVLVETE 55 (286)
T ss_pred cCCcEEEEeCceeEEccc
Confidence 345689999999999997
No 170
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=74.30 E-value=4.2 Score=38.92 Aligned_cols=53 Identities=19% Similarity=0.140 Sum_probs=35.3
Q ss_pred EEEecCcccccccccccCCCCceEEEEecceeeeEEEeeCccHHHHHHHhHhccEEEEEcCCcHHHHHHHHHHhCCC
Q 013017 273 LVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPD 349 (451)
Q Consensus 273 LVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~yV~lRPgL~eFL~~Lsk~YEIvVfTAs~~~YAd~ILd~LDP~ 349 (451)
+++||||||++.... +.|. .+-|+...+...++|.|.-...-+..++..++..
T Consensus 2 i~~DlDgTLl~~~~~-----------------------~~~~-~~~~~~~~~gi~~viaTGR~~~~v~~~~~~l~l~ 54 (236)
T TIGR02471 2 IITDLDNTLLGDDEG-----------------------LASF-VELLRGSGDAVGFGIATGRSVESAKSRYAKLNLP 54 (236)
T ss_pred eEEeccccccCCHHH-----------------------HHHH-HHHHHhcCCCceEEEEeCCCHHHHHHHHHhCCCC
Confidence 688999999974311 1122 2445533356778888888888888888877654
No 171
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=73.59 E-value=1.4 Score=39.82 Aligned_cols=15 Identities=20% Similarity=0.503 Sum_probs=13.0
Q ss_pred EEEEecCcccccccc
Q 013017 272 TLVLDLDETLVHSTL 286 (451)
Q Consensus 272 tLVLDLDeTLVhSs~ 286 (451)
.+|||+||||+++..
T Consensus 1 ~iiFD~DGTL~ds~~ 15 (185)
T TIGR01990 1 AVIFDLDGVITDTAE 15 (185)
T ss_pred CeEEcCCCccccChH
Confidence 379999999999973
No 172
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=73.49 E-value=4.7 Score=41.04 Aligned_cols=90 Identities=11% Similarity=0.168 Sum_probs=50.7
Q ss_pred CceEEEEecCccccccccccc----CCCCceEEEEec-ceeeeEEEeeCccHHHHHHHhH-hccEEEEEcCCcHHHHHHH
Q 013017 269 KSVTLVLDLDETLVHSTLEYC----DDADFTFTVFFN-MKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQL 342 (451)
Q Consensus 269 kkktLVLDLDeTLVhSs~~~~----~~~df~~~v~~~-~~~~~~yV~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~YAd~I 342 (451)
++-.+|||+|||++....... ....|. ...|+ .-...--...=|++.+|++++. .+++|++.|.-....-+.=
T Consensus 100 ~~dA~V~DIDET~LsN~pY~~~~~~g~e~~~-~~~w~~~Wv~~~~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT 178 (275)
T TIGR01680 100 EKDTFLFNIDGTALSNIPYYKKHGYGSEKFD-SELYDEEFVNKGEAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVT 178 (275)
T ss_pred CCCEEEEECccccccCHHHHHHhcCCCCcCC-hhhhhHHHHhcccCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHH
Confidence 356999999999996442111 001110 00011 0000001234689999999997 7899999998877655555
Q ss_pred HHHhCCCCCc--eeEEEeec
Q 013017 343 LDILDPDGKL--ISRRVYRE 360 (451)
Q Consensus 343 Ld~LDP~~~l--f~~rL~Re 360 (451)
++.|.-.| + .++.+.|.
T Consensus 179 ~~NL~kaG-y~~~~~LiLR~ 197 (275)
T TIGR01680 179 EANLKKAG-YHTWEKLILKD 197 (275)
T ss_pred HHHHHHcC-CCCcceeeecC
Confidence 55554444 2 24445553
No 173
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=73.30 E-value=7.8 Score=37.17 Aligned_cols=38 Identities=13% Similarity=0.038 Sum_probs=34.0
Q ss_pred EeeCccHHHHHH-HhH-hccEEEEEcCCcHHHHHHHHHHh
Q 013017 309 VKQRPHLKTFLE-RVA-EMFEVVIFTASQSIYAAQLLDIL 346 (451)
Q Consensus 309 V~lRPgL~eFL~-~Ls-k~YEIvVfTAs~~~YAd~ILd~L 346 (451)
+.++||+.+.|+ .+. +++.++|-|++...|++++.+..
T Consensus 93 ~~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~ 132 (210)
T TIGR01545 93 VTAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDS 132 (210)
T ss_pred CCCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhc
Confidence 357999999995 788 69999999999999999999874
No 174
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=73.17 E-value=1.4 Score=41.17 Aligned_cols=13 Identities=54% Similarity=0.708 Sum_probs=11.9
Q ss_pred EEEecCccccccc
Q 013017 273 LVLDLDETLVHST 285 (451)
Q Consensus 273 LVLDLDeTLVhSs 285 (451)
+||||||||+.|.
T Consensus 1 iiFDlDGTL~Ds~ 13 (205)
T TIGR01454 1 VVFDLDGVLVDSF 13 (205)
T ss_pred CeecCcCccccCH
Confidence 5899999999996
No 175
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=72.14 E-value=2.2 Score=40.30 Aligned_cols=17 Identities=24% Similarity=0.505 Sum_probs=14.6
Q ss_pred CceEEEEecCccccccc
Q 013017 269 KSVTLVLDLDETLVHST 285 (451)
Q Consensus 269 kkktLVLDLDeTLVhSs 285 (451)
+.+.++||+||||+++.
T Consensus 6 ~~k~iiFD~DGTL~d~~ 22 (222)
T PRK10826 6 QILAAIFDMDGLLIDSE 22 (222)
T ss_pred cCcEEEEcCCCCCCcCH
Confidence 35689999999999985
No 176
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=71.58 E-value=2 Score=40.03 Aligned_cols=15 Identities=40% Similarity=0.654 Sum_probs=13.4
Q ss_pred eEEEEecCccccccc
Q 013017 271 VTLVLDLDETLVHST 285 (451)
Q Consensus 271 ktLVLDLDeTLVhSs 285 (451)
+.++||+||||+++.
T Consensus 2 k~viFD~DGTL~d~~ 16 (224)
T TIGR02254 2 KTLLFDLDDTILDFQ 16 (224)
T ss_pred CEEEEcCcCcccccc
Confidence 479999999999976
No 177
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=71.51 E-value=1.6 Score=40.57 Aligned_cols=13 Identities=54% Similarity=0.802 Sum_probs=11.8
Q ss_pred EEEecCccccccc
Q 013017 273 LVLDLDETLVHST 285 (451)
Q Consensus 273 LVLDLDeTLVhSs 285 (451)
+|||+||||+.|.
T Consensus 1 viFD~DGTL~Ds~ 13 (213)
T TIGR01449 1 VLFDLDGTLVDSA 13 (213)
T ss_pred CeecCCCccccCH
Confidence 5899999999986
No 178
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=70.56 E-value=2.2 Score=39.49 Aligned_cols=15 Identities=33% Similarity=0.377 Sum_probs=13.3
Q ss_pred eEEEEecCccccccc
Q 013017 271 VTLVLDLDETLVHST 285 (451)
Q Consensus 271 ktLVLDLDeTLVhSs 285 (451)
+.++||+||||+++.
T Consensus 2 k~viFD~dgTLiD~~ 16 (198)
T TIGR01428 2 KALVFDVYGTLFDVH 16 (198)
T ss_pred cEEEEeCCCcCccHH
Confidence 379999999999976
No 179
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=70.52 E-value=2.5 Score=38.61 Aligned_cols=16 Identities=31% Similarity=0.439 Sum_probs=13.4
Q ss_pred ceEEEEecCccccccc
Q 013017 270 SVTLVLDLDETLVHST 285 (451)
Q Consensus 270 kktLVLDLDeTLVhSs 285 (451)
.+++|||+||||+.+.
T Consensus 4 ~k~viFD~DGTLid~~ 19 (201)
T TIGR01491 4 IKLIIFDLDGTLTDVM 19 (201)
T ss_pred ceEEEEeCCCCCcCCc
Confidence 3589999999999853
No 180
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=70.27 E-value=2.4 Score=39.55 Aligned_cols=15 Identities=20% Similarity=0.419 Sum_probs=13.3
Q ss_pred eEEEEecCccccccc
Q 013017 271 VTLVLDLDETLVHST 285 (451)
Q Consensus 271 ktLVLDLDeTLVhSs 285 (451)
+++||||||||+++.
T Consensus 3 k~viFDldGtL~d~~ 17 (211)
T TIGR02247 3 KAVIFDFGGVLLPSP 17 (211)
T ss_pred eEEEEecCCceecCH
Confidence 489999999999874
No 181
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=70.18 E-value=2.1 Score=38.58 Aligned_cols=13 Identities=38% Similarity=0.516 Sum_probs=12.0
Q ss_pred EEEecCccccccc
Q 013017 273 LVLDLDETLVHST 285 (451)
Q Consensus 273 LVLDLDeTLVhSs 285 (451)
|+|||||||+.+.
T Consensus 2 viFD~DGTL~D~~ 14 (175)
T TIGR01493 2 MVFDVYGTLVDVH 14 (175)
T ss_pred eEEecCCcCcccH
Confidence 7999999999986
No 182
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=69.81 E-value=6.7 Score=38.53 Aligned_cols=54 Identities=24% Similarity=0.238 Sum_probs=34.7
Q ss_pred ceEEEEecCcccc-cccccccCCCCceEEEEecceeeeEEEeeCccHHHHHH-HhHhccEEEEEcCCcHHHHHHHHHHhC
Q 013017 270 SVTLVLDLDETLV-HSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLE-RVAEMFEVVIFTASQSIYAAQLLDILD 347 (451)
Q Consensus 270 kktLVLDLDeTLV-hSs~~~~~~~df~~~v~~~~~~~~~yV~lRPgL~eFL~-~Lsk~YEIvVfTAs~~~YAd~ILd~LD 347 (451)
++.|+.||||||+ ... .-+.-+.++|+ ......-+++-|..+..-+..++....
T Consensus 2 ~~ll~sDlD~Tl~~~~~------------------------~~~~~l~~~l~~~~~~~~~~v~~TGRs~~~~~~~~~~~~ 57 (247)
T PF05116_consen 2 PRLLASDLDGTLIDGDD------------------------EALARLEELLEQQARPEILFVYVTGRSLESVLRLLREYN 57 (247)
T ss_dssp SEEEEEETBTTTBHCHH------------------------HHHHHHHHHHHHHHCCGEEEEEE-SS-HHHHHHHHHHCT
T ss_pred CEEEEEECCCCCcCCCH------------------------HHHHHHHHHHHHhhCCCceEEEECCCCHHHHHHHHHhCC
Confidence 5789999999999 210 01334555566 233557777778888888888888754
No 183
>PRK09449 dUMP phosphatase; Provisional
Probab=69.69 E-value=2.4 Score=39.89 Aligned_cols=15 Identities=40% Similarity=0.443 Sum_probs=12.8
Q ss_pred ceEEEEecCcccccc
Q 013017 270 SVTLVLDLDETLVHS 284 (451)
Q Consensus 270 kktLVLDLDeTLVhS 284 (451)
-++++|||||||++.
T Consensus 3 ~k~iiFDlDGTLid~ 17 (224)
T PRK09449 3 YDWILFDADETLFHF 17 (224)
T ss_pred ccEEEEcCCCchhcc
Confidence 358999999999974
No 184
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=68.77 E-value=2.7 Score=39.28 Aligned_cols=16 Identities=44% Similarity=0.551 Sum_probs=13.8
Q ss_pred ceEEEEecCccccccc
Q 013017 270 SVTLVLDLDETLVHST 285 (451)
Q Consensus 270 kktLVLDLDeTLVhSs 285 (451)
.+.++||+||||+++.
T Consensus 6 ~~~iiFD~DGTL~d~~ 21 (226)
T PRK13222 6 IRAVAFDLDGTLVDSA 21 (226)
T ss_pred CcEEEEcCCcccccCH
Confidence 4589999999999875
No 185
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=66.77 E-value=15 Score=34.44 Aligned_cols=62 Identities=18% Similarity=0.208 Sum_probs=40.4
Q ss_pred EEEecCcccccccccccCCCCceEEEEecceeeeEEEeeCccHHHHHHHhH-hccEEEEEcCCcHHHHHHHHHHh
Q 013017 273 LVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDIL 346 (451)
Q Consensus 273 LVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~yV~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~YAd~ILd~L 346 (451)
+|.|+||||.-|-.... . ....... +.+||+.++...+. ++|.++=-|+-.--.|...-..|
T Consensus 2 VvsDIDGTiT~SD~~G~-----i----~~~~G~d---~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L 64 (157)
T PF08235_consen 2 VVSDIDGTITKSDVLGH-----I----LPILGKD---WTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWL 64 (157)
T ss_pred EEEeccCCcCccchhhh-----h----hhccCch---hhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHH
Confidence 68899999988742110 0 0001111 56999999999999 67988877887655555544443
No 186
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=66.38 E-value=6.2 Score=35.70 Aligned_cols=47 Identities=17% Similarity=0.260 Sum_probs=38.0
Q ss_pred eCccHH----HHHHHhH-hccEEEEEcCCcHHHHHHHHHHhCCCC-CceeEEE
Q 013017 311 QRPHLK----TFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDG-KLISRRV 357 (451)
Q Consensus 311 lRPgL~----eFL~~Ls-k~YEIvVfTAs~~~YAd~ILd~LDP~~-~lf~~rL 357 (451)
++|++. +||+++. +.++++|-|++...+++.+++.++... ..+...+
T Consensus 86 ~~~~~~~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v~~~~~ 138 (192)
T PF12710_consen 86 LFPGFIPDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNVIGNEL 138 (192)
T ss_dssp HCTTCHTTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGEEEEEE
T ss_pred cCcCchhhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEEEEEee
Confidence 357777 9999985 889999999999999999999887664 2344444
No 187
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=65.24 E-value=2.6 Score=37.82 Aligned_cols=15 Identities=33% Similarity=0.634 Sum_probs=12.8
Q ss_pred EEEEecCcccccccc
Q 013017 272 TLVLDLDETLVHSTL 286 (451)
Q Consensus 272 tLVLDLDeTLVhSs~ 286 (451)
.++|||||||+++..
T Consensus 1 ~vlFDlDgtLv~~~~ 15 (183)
T TIGR01509 1 AILFDLDGVLVDTSS 15 (183)
T ss_pred CeeeccCCceechHH
Confidence 379999999999853
No 188
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=64.54 E-value=3.1 Score=36.22 Aligned_cols=13 Identities=46% Similarity=0.828 Sum_probs=11.7
Q ss_pred EEEecCccccccc
Q 013017 273 LVLDLDETLVHST 285 (451)
Q Consensus 273 LVLDLDeTLVhSs 285 (451)
++||+||||+++.
T Consensus 1 iifD~dgtL~d~~ 13 (176)
T PF13419_consen 1 IIFDLDGTLVDTD 13 (176)
T ss_dssp EEEESBTTTEEHH
T ss_pred cEEECCCCcEeCH
Confidence 6899999999875
No 189
>PLN02382 probable sucrose-phosphatase
Probab=59.38 E-value=19 Score=38.33 Aligned_cols=17 Identities=35% Similarity=0.530 Sum_probs=14.1
Q ss_pred CCceEEEEecCcccccc
Q 013017 268 RKSVTLVLDLDETLVHS 284 (451)
Q Consensus 268 ~kkktLVLDLDeTLVhS 284 (451)
..++.|+.||||||+..
T Consensus 7 ~~~~lI~sDLDGTLL~~ 23 (413)
T PLN02382 7 SPRLMIVSDLDHTMVDH 23 (413)
T ss_pred CCCEEEEEcCCCcCcCC
Confidence 34678999999999965
No 190
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=57.79 E-value=16 Score=35.19 Aligned_cols=49 Identities=22% Similarity=0.154 Sum_probs=29.1
Q ss_pred EEecCcccccccccccCCCCceEEEEecceeeeEEEeeCccHHHHHHHhHhccE--EEEEcCCcHHHHH
Q 013017 274 VLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFE--VVIFTASQSIYAA 340 (451)
Q Consensus 274 VLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~yV~lRPgL~eFL~~Lsk~YE--IvVfTAs~~~YAd 340 (451)
.||.||||.--...+. -...-|++.+.|+.|++... |+|.|.-...-.+
T Consensus 1 ~lDyDGTL~p~~~~p~------------------~~~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~~~ 51 (235)
T PF02358_consen 1 FLDYDGTLAPIVDDPD------------------AAVPPPELRELLRALAADPNNTVAIVSGRSLDDLE 51 (235)
T ss_dssp EEE-TTTSS---S-GG------------------G----HHHHHHHHHHHHHSE--EEEE-SS-HHHHH
T ss_pred CcccCCccCCCCCCcc------------------ccCCCHHHHHHHHHHhccCCCEEEEEEeCCHHHhH
Confidence 5899999986543221 13457899999999997766 7788877766633
No 191
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=57.75 E-value=18 Score=42.36 Aligned_cols=59 Identities=17% Similarity=0.122 Sum_probs=41.6
Q ss_pred CCceEEEEecCcccccccccccCCCCceEEEEecceeeeEEEeeCccHHHHHHHhH--hccEEEEEcCCcHHHHHHHHHH
Q 013017 268 RKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA--EMFEVVIFTASQSIYAAQLLDI 345 (451)
Q Consensus 268 ~kkktLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~yV~lRPgL~eFL~~Ls--k~YEIvVfTAs~~~YAd~ILd~ 345 (451)
.++..|+||+||||+..... -+..-|++.+.|+.|. +...++|.|.-...-.+.++..
T Consensus 594 ~~~rlI~LDyDGTLlp~~~~--------------------~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~ 653 (854)
T PLN02205 594 TTTRAILLDYDGTLMPQASI--------------------DKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSP 653 (854)
T ss_pred hcCeEEEEecCCcccCCccc--------------------cCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCC
Confidence 45678999999999954210 0122468888999985 4678888888877777766654
Q ss_pred h
Q 013017 346 L 346 (451)
Q Consensus 346 L 346 (451)
+
T Consensus 654 ~ 654 (854)
T PLN02205 654 C 654 (854)
T ss_pred C
Confidence 4
No 192
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=52.53 E-value=43 Score=31.21 Aligned_cols=66 Identities=26% Similarity=0.346 Sum_probs=36.9
Q ss_pred eCccHHHHHHHhH-hccEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeeceeeeeCCcccccccccCCCCCcEEEEECC
Q 013017 311 QRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNS 389 (451)
Q Consensus 311 lRPgL~eFL~~Ls-k~YEIvVfTAs~~~YAd~ILd~LDP~~~lf~~rL~Re~C~~~~g~yiKDLs~LgrdlskvIIIDDs 389 (451)
.|-.+.+||+.+. ++-.|++|-|+.+.- .+|..++....++. .++|++
T Consensus 53 ~~~~l~~~L~~~~~~gk~I~~yGA~~kg~--tlln~~g~~~~~I~-----------------------------~vvD~n 101 (160)
T PF08484_consen 53 SKAELREFLEKLKAEGKRIAGYGAGAKGN--TLLNYFGLDNDLID-----------------------------YVVDDN 101 (160)
T ss_dssp HHHHHHHHHHHHHHTT--EEEE---SHHH--HHHHHHT--TTTS-------------------------------EEES-
T ss_pred HHHHHHHHHHHHHHcCCEEEEECcchHHH--HHHHHhCCCcceeE-----------------------------EEEeCC
Confidence 3566778888887 567799999988744 56777777654442 367877
Q ss_pred hhhh-ccCCCceeeecccc
Q 013017 390 PQVF-RLQVNNGIPIESWF 407 (451)
Q Consensus 390 p~~~-~~qpeNgIpI~~f~ 407 (451)
|... .+-|..+|||.+..
T Consensus 102 p~K~G~~~PGt~ipI~~p~ 120 (160)
T PF08484_consen 102 PLKQGKYLPGTHIPIVSPE 120 (160)
T ss_dssp GGGTTEE-TTT--EEEEGG
T ss_pred hhhcCcccCCCCCeECCHH
Confidence 7766 34677778877764
No 193
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=52.51 E-value=7.6 Score=36.87 Aligned_cols=16 Identities=25% Similarity=0.515 Sum_probs=13.7
Q ss_pred ceEEEEecCccccccc
Q 013017 270 SVTLVLDLDETLVHST 285 (451)
Q Consensus 270 kktLVLDLDeTLVhSs 285 (451)
++++++|+||||+.+.
T Consensus 3 ~~~vifDfDgTi~~~d 18 (219)
T PRK09552 3 SIQIFCDFDGTITNND 18 (219)
T ss_pred CcEEEEcCCCCCCcch
Confidence 4589999999999875
No 194
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=52.43 E-value=26 Score=40.60 Aligned_cols=64 Identities=17% Similarity=0.156 Sum_probs=45.0
Q ss_pred CCCceEEEEecCcccccccccccCCCCceEEEEecceeeeEEEeeCccHHHHHHHhHh--ccEEEEEcCCcHHHHHHHHH
Q 013017 267 GRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE--MFEVVIFTASQSIYAAQLLD 344 (451)
Q Consensus 267 ~~kkktLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~yV~lRPgL~eFL~~Lsk--~YEIvVfTAs~~~YAd~ILd 344 (451)
..++..|+||.||||+.....+. ...-+..-|++.+-|+.|.+ .-.|+|-|.-...-.+.++.
T Consensus 504 ~a~~rll~LDyDGTL~~~~~~~~---------------~p~~a~p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~ 568 (797)
T PLN03063 504 KSNNRLLILGFYGTLTEPRNSQI---------------KEMDLGLHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFG 568 (797)
T ss_pred hccCeEEEEecCccccCCCCCcc---------------ccccCCCCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHhC
Confidence 34567889999999995322110 00113456899999999985 57899999888887777775
Q ss_pred H
Q 013017 345 I 345 (451)
Q Consensus 345 ~ 345 (451)
.
T Consensus 569 ~ 569 (797)
T PLN03063 569 E 569 (797)
T ss_pred C
Confidence 4
No 195
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=51.20 E-value=9.2 Score=35.66 Aligned_cols=16 Identities=31% Similarity=0.463 Sum_probs=13.9
Q ss_pred ceEEEEecCccccccc
Q 013017 270 SVTLVLDLDETLVHST 285 (451)
Q Consensus 270 kktLVLDLDeTLVhSs 285 (451)
.++++||+||||++..
T Consensus 4 ~k~i~FD~d~TL~d~~ 19 (229)
T COG1011 4 IKAILFDLDGTLLDFD 19 (229)
T ss_pred eeEEEEecCCcccccc
Confidence 4689999999999974
No 196
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=50.62 E-value=19 Score=36.15 Aligned_cols=102 Identities=17% Similarity=0.255 Sum_probs=57.1
Q ss_pred EEeeCccHHHHHHHhH-hccEEEEEcCCcHHHHHHHHHHhCC---CCCceeEEEeec-e---eeeeCC---ccccccccc
Q 013017 308 YVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDP---DGKLISRRVYRE-S---CIFSDG---TYTKDLTVL 376 (451)
Q Consensus 308 yV~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~YAd~ILd~LDP---~~~lf~~rL~Re-~---C~~~~g---~yiKDLs~L 376 (451)
-+.+|.|+.+|++.|. ..--+.|||||--...+.+|+.-.. .=+.++..+.-+ . +.+... .|.|+-..+
T Consensus 88 ~i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~~Nv~VvSN~M~Fd~~g~l~gF~~~lIH~~NKn~~~l 167 (246)
T PF05822_consen 88 DIMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFHPNVKVVSNFMDFDEDGVLVGFKGPLIHTFNKNESAL 167 (246)
T ss_dssp ---B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--BTTEEEEEE-EEE-TTSBEEEE-SS---TT-HHHHHH
T ss_pred chhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCCCCeEEEeeeEEECCcceEeecCCCceEEeeCCcccc
Confidence 3789999999999999 5589999999999999999998632 223455555422 1 111111 344543333
Q ss_pred --------CCCCCcEEEEECChhhhcc-----CCCceeeeccccCCC
Q 013017 377 --------GVDLAKVAIIDNSPQVFRL-----QVNNGIPIESWFDDP 410 (451)
Q Consensus 377 --------grdlskvIIIDDsp~~~~~-----qpeNgIpI~~f~gd~ 410 (451)
-....++|++=|+..-..+ ..+|.|.|- |..+.
T Consensus 168 ~~~~~~~~~~~R~NvlLlGDslgD~~Ma~G~~~~~~~lkIG-FLn~~ 213 (246)
T PF05822_consen 168 EDSPYFKQLKKRTNVLLLGDSLGDLHMADGVPDEENVLKIG-FLNDK 213 (246)
T ss_dssp TTHHHHHCTTT--EEEEEESSSGGGGTTTT-S--SEEEEEE-EE-SS
T ss_pred cCchHHHHhccCCcEEEecCccCChHhhcCCCccccEEEEE-ecccC
Confidence 1356889999999975533 335555553 43333
No 197
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=49.67 E-value=9.1 Score=36.74 Aligned_cols=16 Identities=31% Similarity=0.436 Sum_probs=13.6
Q ss_pred ceEEEEecCccccccc
Q 013017 270 SVTLVLDLDETLVHST 285 (451)
Q Consensus 270 kktLVLDLDeTLVhSs 285 (451)
++..+||+||||++.-
T Consensus 5 ~~la~FDfDgTLt~~d 20 (210)
T TIGR01545 5 KRIIFFDLDGTLHQQD 20 (210)
T ss_pred CcEEEEcCCCCCccCc
Confidence 4578999999999874
No 198
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=49.51 E-value=9.2 Score=35.61 Aligned_cols=14 Identities=21% Similarity=0.437 Sum_probs=12.5
Q ss_pred EEEEecCccccccc
Q 013017 272 TLVLDLDETLVHST 285 (451)
Q Consensus 272 tLVLDLDeTLVhSs 285 (451)
++||||||||++..
T Consensus 2 ~viFDldgvL~d~~ 15 (199)
T PRK09456 2 LYIFDLGNVIVDID 15 (199)
T ss_pred EEEEeCCCccccCc
Confidence 68999999999874
No 199
>KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only]
Probab=47.06 E-value=1.1e+02 Score=28.23 Aligned_cols=121 Identities=14% Similarity=0.063 Sum_probs=64.3
Q ss_pred CceEEEEecCcccccccccccCCCCceEEEEecceeeeEEEeeCccHHHHHHHhH-hccEEEEEcCC-cHHHHHHHHHHh
Q 013017 269 KSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTAS-QSIYAAQLLDIL 346 (451)
Q Consensus 269 kkktLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~yV~lRPgL~eFL~~Ls-k~YEIvVfTAs-~~~YAd~ILd~L 346 (451)
++..++||||-||.-.-..-..+..|. +.....+..+.-...=|...--|..|+ ++.++++.+-+ ...||.+.|+.+
T Consensus 4 ~p~~~~fdldytiwP~~vdthl~~pfk-P~k~~~g~~g~e~~fY~Di~rIL~dLk~~GVtl~~ASRt~ap~iA~q~L~~f 82 (144)
T KOG4549|consen 4 KPEAMQFDLDYTIWPRLVDTHLDYPFK-PFKCECGSKGEEMIFYDDIRRILVDLKKLGVTLIHASRTMAPQIASQGLETF 82 (144)
T ss_pred CCceeEEeccceeeeEEEEeccccccc-ccccCcccCcceeeeccchhHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHh
Confidence 345677888877754321111111100 111111122222344567777889998 67999999887 579999999998
Q ss_pred CCCCCceeEEEeec---eeeeeCC---ccccccc-ccCCCCCcEEEEECChh
Q 013017 347 DPDGKLISRRVYRE---SCIFSDG---TYTKDLT-VLGVDLAKVAIIDNSPQ 391 (451)
Q Consensus 347 DP~~~lf~~rL~Re---~C~~~~g---~yiKDLs-~LgrdlskvIIIDDsp~ 391 (451)
..... +.-+-..+ .-...+| ...|++. --+...++..++||...
T Consensus 83 kvk~~-Gvlkps~e~ft~~~~g~gsklghfke~~n~s~~~~k~~~~fdDesr 133 (144)
T KOG4549|consen 83 KVKQT-GVLKPSLEEFTFEAVGDGSKLGHFKEFTNNSNSIEKNKQVFDDESR 133 (144)
T ss_pred ccCcc-cccchhhhcCceeeecCcccchhHHHHhhccCcchhceeeeccccc
Confidence 64421 11111111 1111222 1235553 33667788888888654
No 200
>PRK10671 copA copper exporting ATPase; Provisional
Probab=44.70 E-value=21 Score=41.23 Aligned_cols=85 Identities=14% Similarity=0.150 Sum_probs=59.3
Q ss_pred eeCccHHHHHHHhH-hccEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeeceeeeeCCcccccccccCCCCCcEEEEEC
Q 013017 310 KQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDN 388 (451)
Q Consensus 310 ~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~YAd~ILd~LDP~~~lf~~rL~Re~C~~~~g~yiKDLs~LgrdlskvIIIDD 388 (451)
..||++.+.|+++. ..+++++.|...+..|+.+++.++... +|.... ...-.+-++.++....+++.|-|
T Consensus 650 ~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~-~~~~~~--------p~~K~~~i~~l~~~~~~v~~vGD 720 (834)
T PRK10671 650 PLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDE-VIAGVL--------PDGKAEAIKRLQSQGRQVAMVGD 720 (834)
T ss_pred cchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCE-EEeCCC--------HHHHHHHHHHHhhcCCEEEEEeC
Confidence 45999999999998 679999999999999999999998764 333211 11112333445566778999999
Q ss_pred ChhhhccCCCceeee
Q 013017 389 SPQVFRLQVNNGIPI 403 (451)
Q Consensus 389 sp~~~~~qpeNgIpI 403 (451)
...-...-...++-|
T Consensus 721 g~nD~~al~~Agvgi 735 (834)
T PRK10671 721 GINDAPALAQADVGI 735 (834)
T ss_pred CHHHHHHHHhCCeeE
Confidence 986554333344433
No 201
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=42.27 E-value=46 Score=39.47 Aligned_cols=71 Identities=15% Similarity=0.185 Sum_probs=47.5
Q ss_pred CCCceEEEEecCcccccccccccCCCCceEEEEecceeeeEEEeeCccHHHHHHHhHh--ccEEEEEcCCcHHHHHHHHH
Q 013017 267 GRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE--MFEVVIFTASQSIYAAQLLD 344 (451)
Q Consensus 267 ~~kkktLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~yV~lRPgL~eFL~~Lsk--~YEIvVfTAs~~~YAd~ILd 344 (451)
..++..|+||.||||+.-...+...... ...+-+..-|.+.+.|+.|.+ ...|+|-|.-...-.+.++.
T Consensus 588 ~a~~RLlfLDyDGTLap~~~~P~~~~~~---------~~~~~a~p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg 658 (934)
T PLN03064 588 QSNNRLLILGFNATLTEPVDTPGRRGDQ---------IKEMELRLHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENFG 658 (934)
T ss_pred hccceEEEEecCceeccCCCCccccccc---------ccccccCCCHHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHhC
Confidence 3456789999999998643222100000 001123455889999999995 57899999999888888776
Q ss_pred Hh
Q 013017 345 IL 346 (451)
Q Consensus 345 ~L 346 (451)
.+
T Consensus 659 ~~ 660 (934)
T PLN03064 659 EF 660 (934)
T ss_pred CC
Confidence 54
No 202
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=39.85 E-value=23 Score=38.87 Aligned_cols=23 Identities=30% Similarity=0.382 Sum_probs=19.5
Q ss_pred EEEEEcCCcHHHHHHHHHH-hCCC
Q 013017 327 EVVIFTASQSIYAAQLLDI-LDPD 349 (451)
Q Consensus 327 EIvVfTAs~~~YAd~ILd~-LDP~ 349 (451)
+.+|-||+.+.|++++++. |+.+
T Consensus 124 ~~vvVSASp~~~Vepfa~~~LGid 147 (497)
T PLN02177 124 KRYIITASPRIMVEPFVKTFLGAD 147 (497)
T ss_pred CEEEEECCcHHHHHHHHHHcCCCC
Confidence 4599999999999999975 6655
No 203
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=39.61 E-value=14 Score=33.09 Aligned_cols=13 Identities=31% Similarity=0.560 Sum_probs=11.1
Q ss_pred EEEecCccccccc
Q 013017 273 LVLDLDETLVHST 285 (451)
Q Consensus 273 LVLDLDeTLVhSs 285 (451)
+|||+||||+...
T Consensus 2 ~~fD~DgTl~~~~ 14 (177)
T TIGR01488 2 AIFDFDGTLTRQD 14 (177)
T ss_pred EEecCccccccch
Confidence 6899999999753
No 204
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=39.51 E-value=16 Score=32.98 Aligned_cols=13 Identities=38% Similarity=0.682 Sum_probs=11.4
Q ss_pred EEEecCccccccc
Q 013017 273 LVLDLDETLVHST 285 (451)
Q Consensus 273 LVLDLDeTLVhSs 285 (451)
++||+||||+...
T Consensus 1 v~fD~DGTL~~~~ 13 (192)
T PF12710_consen 1 VIFDFDGTLTDSD 13 (192)
T ss_dssp EEEESBTTTBSSH
T ss_pred eEEecCcCeecCC
Confidence 5899999999875
No 205
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=38.46 E-value=16 Score=33.74 Aligned_cols=13 Identities=31% Similarity=0.445 Sum_probs=11.3
Q ss_pred EEEecCccccccc
Q 013017 273 LVLDLDETLVHST 285 (451)
Q Consensus 273 LVLDLDeTLVhSs 285 (451)
++||+||||+...
T Consensus 2 a~FD~DgTL~~~~ 14 (202)
T TIGR01490 2 AFFDFDGTLTAKD 14 (202)
T ss_pred eEEccCCCCCCCc
Confidence 6899999999864
No 206
>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]
Probab=37.41 E-value=46 Score=35.78 Aligned_cols=58 Identities=16% Similarity=0.141 Sum_probs=35.3
Q ss_pred CCceEEEEecCcccccccccccCCCCceEEEEecceeeeEEEeeCccHHHHHHHhHhccEEEEEcCCc
Q 013017 268 RKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQ 335 (451)
Q Consensus 268 ~kkktLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~yV~lRPgL~eFL~~Lsk~YEIvVfTAs~ 335 (451)
...+...||||||||....-. .+......|.+..++.-..+=+.=..+|.++|||...
T Consensus 73 ~~~K~i~FD~dgtlI~t~sg~----------vf~~~~~dw~~l~~~vp~Klktl~~~g~~l~iftnq~ 130 (422)
T KOG2134|consen 73 GGSKIIMFDYDGTLIDTKSGK----------VFPKGSMDWRILFPEVPSKLKTLYQDGIKLFIFTNQN 130 (422)
T ss_pred CCcceEEEecCCceeecCCcc----------eeeccCccceeeccccchhhhhhccCCeEEEEEeccc
Confidence 345678899999999875311 1222233444555555555433334789999998654
No 207
>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3.1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....
Probab=36.40 E-value=65 Score=35.03 Aligned_cols=52 Identities=23% Similarity=0.401 Sum_probs=39.6
Q ss_pred EEEeeCccHHHHHHHhHhc-cEEEEEcCCcHHHHHHHHHHh-CC-------CCCceeEEEe
Q 013017 307 VYVKQRPHLKTFLERVAEM-FEVVIFTASQSIYAAQLLDIL-DP-------DGKLISRRVY 358 (451)
Q Consensus 307 ~yV~lRPgL~eFL~~Lsk~-YEIvVfTAs~~~YAd~ILd~L-DP-------~~~lf~~rL~ 358 (451)
-||.+-|.+..+|+.|++. -.+.+-|.|...|++.+++.+ ++ ++.||+-++.
T Consensus 180 kYi~k~~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~M~yl~g~~~~~~~dW~dlFDvVIv 240 (448)
T PF05761_consen 180 KYIHKDPKLPPWLERLRSAGKKLFLITNSPFDYTNAVMSYLLGPFLGEDPDWRDLFDVVIV 240 (448)
T ss_dssp CCEE--CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHHHHHHCGCCSSTTT-GGGCECEEEE
T ss_pred HHccCCchHHHHHHHHHhcCceEEEecCCCCchhhhhhhhccCCCCCCCCChhhheeEEEE
Confidence 4678899999999999954 589999999999999999986 44 4568887776
No 208
>COG4229 Predicted enolase-phosphatase [Energy production and conversion]
Probab=32.67 E-value=47 Score=32.50 Aligned_cols=90 Identities=14% Similarity=0.169 Sum_probs=60.3
Q ss_pred eeCccHHHHHHHhH-hccEEEEEcCCcHHHHHHHHH---HhCCCCCceeEEEeeceeee-eCCcccccccccCCCCCcEE
Q 013017 310 KQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLD---ILDPDGKLISRRVYRESCIF-SDGTYTKDLTVLGVDLAKVA 384 (451)
Q Consensus 310 ~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~YAd~ILd---~LDP~~~lf~~rL~Re~C~~-~~g~yiKDLs~LgrdlskvI 384 (451)
.+=|.+-++|++-. ....++||++++-.--.-... ..|..+ ||+..+-...-.. ..+.|.|-+.-+|..+..++
T Consensus 103 hlypDav~~ik~wk~~g~~vyiYSSGSV~AQkL~Fghs~agdL~~-lfsGyfDttiG~KrE~~SY~kIa~~iGl~p~eil 181 (229)
T COG4229 103 HLYPDAVQAIKRWKALGMRVYIYSSGSVKAQKLFFGHSDAGDLNS-LFSGYFDTTIGKKRESQSYAKIAGDIGLPPAEIL 181 (229)
T ss_pred ccCHhHHHHHHHHHHcCCcEEEEcCCCchhHHHhhcccccccHHh-hhcceeeccccccccchhHHHHHHhcCCCchheE
Confidence 34688899998887 779999999997543222222 233333 6665554322111 13478999999999999999
Q ss_pred EEECChhhhccCCCce
Q 013017 385 IIDNSPQVFRLQVNNG 400 (451)
Q Consensus 385 IIDDsp~~~~~qpeNg 400 (451)
++-|.+.-.....+-|
T Consensus 182 FLSDn~~EL~AA~~vG 197 (229)
T COG4229 182 FLSDNPEELKAAAGVG 197 (229)
T ss_pred EecCCHHHHHHHHhcc
Confidence 9999998664443333
No 209
>TIGR02826 RNR_activ_nrdG3 anaerobic ribonucleoside-triphosphate reductase activating protein. Members of this family represent a set of proteins related to, yet architecturally different from, the activating protein for the glycine radical-containing, oxygen-sensitive ribonucleoside-triphosphate reductase (RNR) as described in model TIGR02491. Members of this family are found paired with members of a similarly divergent set of anaerobic ribonucleoside-triphosphate reductases. Identification of this protein as an RNR activitating protein is partly from pairing with a candidate RNR. It is further supported by our finding that upstream of these operons are examples of a conserved regulatory element (described Rodionov and Gelfand) that is found in nearly all bacteria and that occurs specifically upstream of operons for all three classes of RNR genes.
Probab=31.82 E-value=97 Score=28.39 Aligned_cols=71 Identities=21% Similarity=0.258 Sum_probs=45.5
Q ss_pred EEecceeeeEEEeeCccHHHHHHHhH-hccEEEEEcCCcH-HHHHHHHHHhCCCCCceeEEEeeceeeeeCCcccccccc
Q 013017 298 VFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQS-IYAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTV 375 (451)
Q Consensus 298 v~~~~~~~~~yV~lRPgL~eFL~~Ls-k~YEIvVfTAs~~-~YAd~ILd~LDP~~~lf~~rL~Re~C~~~~g~yiKDLs~ 375 (451)
+.+.+++ ..++.+.++++.++ ..+.+.|+|.... +--+.++..+|. ...|.|+.++..
T Consensus 65 Vt~SGGE-----l~~~~l~~ll~~lk~~Gl~i~l~Tg~~~~~~~~~il~~iD~---------------l~~g~y~~~~~~ 124 (147)
T TIGR02826 65 VLFLGGE-----WNREALLSLLKIFKEKGLKTCLYTGLEPKDIPLELVQHLDY---------------LKTGRWIHTRGG 124 (147)
T ss_pred EEEechh-----cCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHhCCE---------------EEEChHHHHcCC
Confidence 4455555 36789999999998 4699999998654 223344444432 245666666665
Q ss_pred cCCCCCcEEEEEC
Q 013017 376 LGVDLAKVAIIDN 388 (451)
Q Consensus 376 LgrdlskvIIIDD 388 (451)
+++.-+|=+|+|-
T Consensus 125 ~~~~~sNQ~~~~~ 137 (147)
T TIGR02826 125 LGSPTTNQIFIDL 137 (147)
T ss_pred CCCCCcCceEEEC
Confidence 5554557777774
No 210
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=28.61 E-value=32 Score=31.38 Aligned_cols=15 Identities=20% Similarity=0.279 Sum_probs=12.6
Q ss_pred eEEEEecCccccccc
Q 013017 271 VTLVLDLDETLVHST 285 (451)
Q Consensus 271 ktLVLDLDeTLVhSs 285 (451)
.+++||.||||....
T Consensus 2 ~~i~fDktGTLt~~~ 16 (215)
T PF00702_consen 2 DAICFDKTGTLTQGK 16 (215)
T ss_dssp SEEEEECCTTTBESH
T ss_pred eEEEEecCCCcccCe
Confidence 379999999998764
No 211
>PF13701 DDE_Tnp_1_4: Transposase DDE domain group 1
Probab=28.08 E-value=1.3e+02 Score=32.58 Aligned_cols=81 Identities=20% Similarity=0.340 Sum_probs=42.5
Q ss_pred ceEEEEecCcccccccccccC--------CCCce-EEEEecceeeeEEEeeCcc-------HHHHHHHhHhcc-----E-
Q 013017 270 SVTLVLDLDETLVHSTLEYCD--------DADFT-FTVFFNMKEHTVYVKQRPH-------LKTFLERVAEMF-----E- 327 (451)
Q Consensus 270 kktLVLDLDeTLVhSs~~~~~--------~~df~-~~v~~~~~~~~~yV~lRPg-------L~eFL~~Lsk~Y-----E- 327 (451)
+.-+|||||.|.......+.. ...|. +.++....+.-+...+||| +.+||+.+-+.+ +
T Consensus 139 ~~~i~LDiD~T~~~~~G~Qe~~~~n~y~g~~gY~PL~~f~g~~G~~l~a~LRpGn~~sa~g~~~fL~~~l~~lr~~~~~~ 218 (448)
T PF13701_consen 139 PKEIVLDIDSTVDDVHGEQEGAVFNTYYGEDGYHPLVAFDGQTGYLLAAELRPGNVHSAKGAAEFLKRVLRRLRQRWPDT 218 (448)
T ss_pred cceEEEecccccccchhhcccccccccCCCcccccceeccCCCCceEEEEccCCCCChHHHHHHHHHHHHHHHhhhCccc
Confidence 457999999998543322111 11111 1122112333455789998 666776664332 2
Q ss_pred EEEEcCCcHHHHHHHHHHhCCCC
Q 013017 328 VVIFTASQSIYAAQLLDILDPDG 350 (451)
Q Consensus 328 IvVfTAs~~~YAd~ILd~LDP~~ 350 (451)
-+++=+-+--+...+++.+.-.+
T Consensus 219 ~ILvR~DSgF~~~el~~~ce~~g 241 (448)
T PF13701_consen 219 RILVRGDSGFASPELMDWCEAEG 241 (448)
T ss_pred eEEEEecCccCcHHHHHHHHhCC
Confidence 23444444446666777766555
No 212
>KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism]
Probab=26.80 E-value=90 Score=31.01 Aligned_cols=43 Identities=19% Similarity=0.326 Sum_probs=31.4
Q ss_pred CCCceEEEEecCcccccccccccCCCCceEEEEecceeeeEEEeeCccHHHHHHHhHhccEEEEEc
Q 013017 267 GRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFT 332 (451)
Q Consensus 267 ~~kkktLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~yV~lRPgL~eFL~~Lsk~YEIvVfT 332 (451)
+..+..+.+|.||||.-.. -..-|-+.+||+.+.+...|.+--
T Consensus 8 r~~~~l~lfdvdgtLt~~r-----------------------~~~~~e~~~~l~~lr~~v~ig~Vg 50 (252)
T KOG3189|consen 8 RDEETLCLFDVDGTLTPPR-----------------------QKVTPEMLEFLQKLRKKVTIGFVG 50 (252)
T ss_pred cCCceEEEEecCCcccccc-----------------------ccCCHHHHHHHHHHhhheEEEEee
Confidence 3445667789999996543 224688999999999888777543
No 213
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=23.38 E-value=9.8 Score=36.80 Aligned_cols=88 Identities=7% Similarity=-0.039 Sum_probs=56.0
Q ss_pred CccHHHHHHHhH-hccEEEEEcCCcHHHHHHHHHHhCCCCCceeEE--EeeceeeeeCC---cccccccccCC-CCCcEE
Q 013017 312 RPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRR--VYRESCIFSDG---TYTKDLTVLGV-DLAKVA 384 (451)
Q Consensus 312 RPgL~eFL~~Ls-k~YEIvVfTAs~~~YAd~ILd~LDP~~~lf~~r--L~Re~C~~~~g---~yiKDLs~Lgr-dlskvI 384 (451)
-|++.+.|+.+. +...+ |.|.....|+...+..++... +|... ..++.....+. .|.+-+..+|. +.++++
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~~~~g~-~~~~i~~~g~~~~~~gKP~~~~~~~~~~~~~~~~~~~~~ 217 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANPDRGINQHGIYRYGAGY-YAELIKQLGGKVIYSGKPYPAIFHKALKECSNIPKNRML 217 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceEecccH-HHHHHHHhCCcEecCCCCCHHHHHHHHHHcCCCCcccEE
Confidence 489999999876 46666 669999999987776666543 44421 23333323332 45666777875 467899
Q ss_pred EEECCh-hhhccCCCcee
Q 013017 385 IIDNSP-QVFRLQVNNGI 401 (451)
Q Consensus 385 IIDDsp-~~~~~qpeNgI 401 (451)
+|-|+. .-......+|+
T Consensus 218 ~vGD~~~~Di~~a~~~G~ 235 (242)
T TIGR01459 218 MVGDSFYTDILGANRLGI 235 (242)
T ss_pred EECCCcHHHHHHHHHCCC
Confidence 999994 43433333444
No 214
>PLN02499 glycerol-3-phosphate acyltransferase
Probab=22.43 E-value=51 Score=36.37 Aligned_cols=23 Identities=17% Similarity=0.258 Sum_probs=21.0
Q ss_pred EEEEEcCCcHHHHHHHHHH-hCCC
Q 013017 327 EVVIFTASQSIYAAQLLDI-LDPD 349 (451)
Q Consensus 327 EIvVfTAs~~~YAd~ILd~-LDP~ 349 (451)
+++|.||+.+.|+++-++. |+.+
T Consensus 110 ~~vVVTAsPrvmVEpFake~LG~D 133 (498)
T PLN02499 110 KRVVVTRMPRVMVERFAKEHLRAD 133 (498)
T ss_pred eEEEEeCCHHHHHHHHHHHhcCCc
Confidence 9999999999999999998 7665
No 215
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=22.03 E-value=54 Score=30.52 Aligned_cols=16 Identities=19% Similarity=0.466 Sum_probs=12.1
Q ss_pred ceEEEEecCccccccc
Q 013017 270 SVTLVLDLDETLVHST 285 (451)
Q Consensus 270 kktLVLDLDeTLVhSs 285 (451)
|+.|.+|+||||.+..
T Consensus 2 ~i~I~iDiDgVLad~~ 17 (191)
T PF06941_consen 2 KIRIAIDIDGVLADFN 17 (191)
T ss_dssp -EEEEEESBTTTB-HH
T ss_pred CcEEEEECCCCCcccH
Confidence 4559999999999864
No 216
>cd06537 CIDE_N_B CIDE_N domain of CIDE-B proteins. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins. These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40, ICAD/DFF45 and CIDE nucleases during apoptosis. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, CIDE proteins were initially characterized as mitochondrial activators of apoptosis. However, strong metabolic phenotypes of mice lacking CIDE-A and CIDE-B indicated that this family may play critical roles in energy balance.
Probab=21.02 E-value=1.3e+02 Score=25.40 Aligned_cols=16 Identities=50% Similarity=0.536 Sum_probs=13.8
Q ss_pred ceEEEEecCccccccc
Q 013017 270 SVTLVLDLDETLVHST 285 (451)
Q Consensus 270 kktLVLDLDeTLVhSs 285 (451)
..+|||+=|||.|.+.
T Consensus 39 ~~~lvLeeDGT~Vd~E 54 (81)
T cd06537 39 VLTLVLEEDGTAVDSE 54 (81)
T ss_pred ceEEEEecCCCEEccH
Confidence 3699999999999774
No 217
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=20.44 E-value=2.8e+02 Score=31.95 Aligned_cols=75 Identities=13% Similarity=0.026 Sum_probs=54.0
Q ss_pred EEEeeCccHHHHHHHhH-hccEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeeceeeeeCCcccccccccCCCCCcEEE
Q 013017 307 VYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAI 385 (451)
Q Consensus 307 ~yV~lRPgL~eFL~~Ls-k~YEIvVfTAs~~~YAd~ILd~LDP~~~lf~~rL~Re~C~~~~g~yiKDLs~LgrdlskvII 385 (451)
+.-.+||++.+.+++|. .++++++.|...+..|..+.+.++... ++ +...-.+..+++.|. . ..+|++
T Consensus 565 l~d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~~-~~------~~~p~~K~~~v~~l~---~-~~~v~m 633 (741)
T PRK11033 565 LQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGIDF-RA------GLLPEDKVKAVTELN---Q-HAPLAM 633 (741)
T ss_pred EecCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCe-ec------CCCHHHHHHHHHHHh---c-CCCEEE
Confidence 34577999999999998 579999999999999999999998752 11 100112334555554 2 257999
Q ss_pred EECChhh
Q 013017 386 IDNSPQV 392 (451)
Q Consensus 386 IDDsp~~ 392 (451)
|-|...-
T Consensus 634 vGDgiND 640 (741)
T PRK11033 634 VGDGIND 640 (741)
T ss_pred EECCHHh
Confidence 9887654
No 218
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=20.28 E-value=9.2 Score=37.71 Aligned_cols=89 Identities=11% Similarity=0.124 Sum_probs=54.5
Q ss_pred ccHHHHHHHhH-hccEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEe---eceeeeeCC---cccccccccCCCCCcEEE
Q 013017 313 PHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVY---RESCIFSDG---TYTKDLTVLGVDLAKVAI 385 (451)
Q Consensus 313 PgL~eFL~~Ls-k~YEIvVfTAs~~~YAd~ILd~LDP~~~lf~~rL~---Re~C~~~~g---~yiKDLs~LgrdlskvII 385 (451)
|++.+-++.|. ..+.++|.|+..+.++...+..++... +|....+ ++.....+. .|.+-+..+|.+++++++
T Consensus 123 ~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~~~~g~g~-~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~~~ 201 (257)
T TIGR01458 123 QILNQAFRLLLDGAKPLLIAIGKGRYYKRKDGLALDVGP-FVTALEYATDTKATVVGKPSKTFFLEALRATGCEPEEAVM 201 (257)
T ss_pred HHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCCCCCCchH-HHHHHHHHhCCCceeecCCCHHHHHHHHHHhCCChhhEEE
Confidence 67777788887 567888998888777765555444432 4432221 111112232 456677788999999999
Q ss_pred EECCh-hhhccCCCceee
Q 013017 386 IDNSP-QVFRLQVNNGIP 402 (451)
Q Consensus 386 IDDsp-~~~~~qpeNgIp 402 (451)
|.|+. .-......+|+.
T Consensus 202 vGD~~~~Di~~a~~~G~~ 219 (257)
T TIGR01458 202 IGDDCRDDVGGAQDCGMR 219 (257)
T ss_pred ECCCcHHHHHHHHHcCCe
Confidence 99886 334333334443
Done!