Citrus Sinensis ID: 013018

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-
Protein Sequence
MLGIQMPPSKFFMLFLFVIYLSISFQSSFTAAADPTYAYHVCSANFTGNSTYQTNRNLLLSSLPTNASRGNGYSSGFYNETTGQDPNKVYGLFLCRGDQTASSCQDCVTFATRDLVQRCPDGKQTIIWYDQCLLRYSNRSIFSTMDTVPYVSLLNTQNVTDRGRFNQILASLMSQVVNQAVNNSRKFATRTANFTALQTLYSLAQCTPDLSSSDCNVCLQAAIAELPNCCSGKTGAQVLIPSCIVRYEFYPFYNLSATSPPPPAPVLLPPPPPGSARGKSGISSSTIIAIVAPIAVTAVLFIVGLCYFIRKAKNKYNAVPEVNADNDITTLESLQFDFETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPKNNNNWIGQDATR
Secondary Structure (PSIPRED)
ccccccccHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHccccccccccccccEEEcccccccccEEEEEEccccccHHHHHHHHHHHHHHHHHcccccccEEEEccEEEEEEccccccccccccccEEEEccccccccHHHHHHHHHHHHHHHHHHHcccccEEEEEEcccccccEEEEEEccccccHHHHHHHHHHHHHHHHHHccccccEEEEccEEEEEEEEccccccccccccccccccccccccccccccccccccEEEEEEEHHHHHHHHHHHHEEEEEEEccccccccccccccccccccccccccHHHHHHHHccccccccccccccccccccccccccEEEEEEEccccccHHHHHHHHHHHHHccccccccEEEEEcccccEEEEEEEccccccccEEccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHccccccccccccccEEEccccccccEEEEEEEEcccccHHHHHHHHHHHHHHHHHHcccccEEEEEEccEEEEEccccHHccccccccEEEEcccccccHHHHHHHHHHHHHHHHHHHHcccccEcccccccccccEEEEEEEEcccccHHHHHHHHHHHHHHcHHHcccccccEEEcccEEEEEEEEccccccccccccccccccccccccccccccccccEEEEEEEHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccHEEcHHHHHHHHccccHHccccccccccEEccEcccccEEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHEcccccEEEEEEEcccccccEEEEcHHHccccccccccccc
Coil and Loop (DISEMBL)
mlgiqmppskFFMLFLFVIYLSISfqssftaaadptyayhvcsanftgnstyQTNRNLLlsslptnasrgngyssgfynettgqdpnkvyglflcrgdqtasscqdCVTFATRdlvqrcpdgkqtiIWYDqcllrysnrsifstmdtvpyvsllntqnvtdrgRFNQILASLMSQVVNQAVNNSRKFATRTANFTALQTLYSLaqctpdlsssdCNVCLQAAIAelpnccsgktgaqvlipscivryefypfynlsatsppppapvllpppppgsargksgisssTIIAIVAPIAVTAVLFIVGLCYFIRKAKnkynavpevnadndittlesLQFDFETIEVAtnnfstdnklgeggfgevykgvlpsgqEIAVKRLsrssgqggqefKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYefvpnksldyflyaqspknnnnwigqdatr
Flexible Loop (DISEMBL)
MLGIQMPPSKFFMLFLFVIYLSISFQSSFTAAADPTYAYHVCSANFTGNSTYQTNRNLLLSSLPTNASRGNGYSSGFYNETTGQDPNKVYGLFLCRGDQTASSCQDCVTFATRdlvqrcpdgkQTIIWYDQCLLRYSNRSIFSTMDTVPYVSLLNTQNVTDRGRFNQILASLMSQVVNQAVNNSRKFATRTANFTALQTLYSLAQCTPDLSSSDCNVCLQAAIAELPNCCSGKTGAQVLIPSCIVRYEFYPFYNLSATSPPPPAPVLLPPPPPGSARGKSGISSSTIIAIVAPIAVTAVLFIVGLCYFIRKAKNKYNAVPEVNADNDITTLESLQFDFETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLsrssgqggqeFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLyaqspknnnnwigqdatr
Low Complexity Region (SEG)
MLGIQMPPSKFFMLFLFVIYLSISFQSSFTAAADPTYAYHVCSANFTGNSTYQTNRNLLLSSLPTNASRGNGYSSGFYNETTGQDPNKVYGLFLCRGDQTASSCQDCVTFATRDLVQRCPDGKQTIIWYDQCLLRYSNRSIFSTMDTVPYVSLLNTQNVTDRGRFNQILASLMSQVVNQAVNNSRKFATRTANFTALQTLYSLAQCTPDLSSSDCNVCLQAAIAELPNCCSGKTGAQVLIPSCIVRYEFYPFYNlsatsppppapvllpppppgsaRGKSGissstiiaivapiavtavLFIVGLCYFIRKAKNKYNAVPEVNADNDITTLESLQFDFETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPKNNNNWIGQDATR
Disordered region (IsUnstruct)
*********KFFMLFLFVIYLSISFQSSFTAAADPTYAYHVCSANFTGNSTYQTNRNLLLS**************GFYNETTGQDPNKVYGLFLCRGDQTASSCQDCVTFATRDLVQRCPDGKQTIIWYDQCLLRYSNRSIFSTMDTVPYVSLLNTQNVTDRGRFNQILASLMSQVVNQAVNNSRKFATRTANFTALQTLYSLAQCTPDLSSSDCNVCLQAAIAELPNCCSGKTGAQVLIPSCIVRYEFYPFYNL******************************TIIAIVAPIAVTAVLFIVGLCYFIRKAKNKYNAVPEVNADNDITTLESLQFDFETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIA**************FKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQ***************
Disordered Region (DISOPRED)
*************LFLFVIYLSISFQSSFTAAADPTYAYHVCSANFTGNSTYQTNRNLLLSSLPTNASRGNGYSSGFYNETTGQDPNKVYGLFLCRGDQTASSCQDCVTFATRDLVQRCPDGKQTIIWYDQCLLRYSNRSIFSTMDTVPYVSLLNTQNVTDRGRFNQILASLMSQVVNQAVNNSRKFATRTANFTALQTLYSLAQCTPDLSSSDCNVCLQAAIAELPNCCSGKTGAQVLIPSCIVRYEFYPFYNLSATSPPPPAPVLLPPPPPGSARGKSGISSSTIIAIVAPIAVTAVLFIVGLCYFIRKAKNKYNAVPEVNADNDITTLESLQFDFETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPKNNNNWIGQ****
Disordered Region (DISEMBL)
MLGIQMPPSKFFMLFLFVIYLSISFQSSFTAAADPTYAYHVCSANFTGNSTYQTNRNLLLSSLPTNASRGNGYSSGFYNETTGQDPNKVYGLFLCRGDQTASSCQDCVTFATRDLVQRCPDGKQTIIWYDQCLLRYSNRSIFSTMDTVPYVSLLNTQNVTDRGRFNQILASLMSQVVNQAVNNSRKFATRTANFTALQTLYSLAQCTPDLSSSDCNVCLQAAIAELPNCCSGKTGAQVLIPSCIVRYEFYPFYNLSATSPPPPAPVLLPPP**********ISSSTIIAIVAPIAVTAVLFIVGLCYFIRKAKNKYNAVPEVNADNDITTLESLQFDFETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRL********QEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPKNNNNWIGQDATR
Disordered Region (DISPRO)
MLGIQMPPSKFFMLFLFVIYLSISFQSSFTAAADPTYAYHVCSANFTGNSTYQTNRNLLLSSLPTNASRGNGYSSGFYNETTGQDPNKVYGLFLCRGDQTASSCQDCVTFATRDLVQRCPDGKQTIIWYDQCLLRYSNRSIFSTMDTVPYVSLLNTQNVTDRGRFNQILASLMSQVVNQAVNNSRKFATRTANFTALQTLYSLAQCTPDLSSSDCNVCLQAAIAELPNCCSGKTGAQVLIPSCIVRYEFYPFYNLSA*************************SSSTIIAIVAPIAVTAVLFIVGLCYFIRKAKN************DITTLESLQFDFETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPKNNN*WIG*****
Transmembrane Helix (TMHMM)
iiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLGIQMPPSKFFMLFLFVIYLSISFQSSFTAAADPTYAYHVCSANFTGNSTYQTNRNLLLSSLPTNASRGNGYSSGFYNETTGQDPNKVYGLFLCRGDQTASSCQDCVTFATRDLVQRCPDGKQTIIWYDQCLLRYSNRSIFSTMDTVPYVSLLNTQNVTDRGRFNQILASLMSQVVNQAVNNSRKFATRTANFTALQTLYSLAQCTPDLSSSDCNVCLQAAIAELPNCCSGKTGAQVLIPSCIVRYEFYPFYNLSATSPPPPAPVLLPPPPPGSARGKSGISSSTIIAIVAPIAVTAVLFIVGLCYFIRKAKNKYNAVPEVNADNDITTLESLQFDFETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPKNNNNWIGQDATR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	451	2.2.26 [Sep-21-2011]
Q9M0X5	675	Cysteine-rich receptor-li	yes	no	0.935	0.625	0.489	1e-114
Q8GYA4	669	Cysteine-rich receptor-li	no	no	0.889	0.599	0.536	1e-112
Q9C5S8	659	Cysteine-rich receptor-li	no	no	0.875	0.599	0.484	5e-99
O65482	830	Putative cysteine-rich re	no	no	0.906	0.492	0.452	5e-99
O65468	676	Cysteine-rich receptor-li	no	no	0.906	0.605	0.443	6e-97
Q8W4G6	627	Cysteine-rich receptor-li	no	no	0.873	0.628	0.464	1e-95
Q9LZU4	676	Cysteine-rich receptor-li	no	no	0.937	0.625	0.445	2e-93
Q8GWJ7	645	Cysteine-rich receptor-li	no	no	0.904	0.632	0.461	1e-92
O65479	666	Putative cysteine-rich re	no	no	0.889	0.602	0.451	3e-92
Q8H199	658	Cysteine-rich receptor-li	no	no	0.860	0.589	0.423	1e-91

>sp|Q9M0X5|CRK25_ARATH Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana GN=CRK25 PE=2 SV=1

 Score =  413 bits (1062), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 218/445 (48%), Positives = 288/445 (64%), Gaps = 23/445 (5%)

Query: 11  FFMLFLFVIYLSISFQSSFTAAADPTYAYHVC--SANFTGNSTYQTNRNLLLSSLPTNAS 68
            F +FLF+I  +++        +DPTY YH+C  +  ++ NS+Y TN   +LSSL   +S
Sbjct: 11  LFSVFLFMILKTVT--------SDPTYLYHICPNTTTYSRNSSYLTNLRTVLSSL---SS 59

Query: 69  RGNGYSSGFYNETTGQ--DPNKVYGLFLCRGDQTASSCQDCVTFATRDLVQRCPDGKQTI 126
               Y+S F N   G+  D N+VYG+FLCRGD +A  C+DCV FA  + +QRCP  K  +
Sbjct: 60  PNAAYASLFDNAAAGEENDSNRVYGVFLCRGDVSAEICRDCVAFAANETLQRCPREKVAV 119

Query: 127 IWYDQCLLRYSNRSIFSTMDTVPYVSLLNTQNVTDR--GRFNQILASLMSQVVNQAVNNS 184
           IWYD+C++RYSN+SI   M   P V L N QN+T+    RFN+ L +L+  V  +A  +S
Sbjct: 120 IWYDECMVRYSNQSIVGQMRIRPGVFLTNKQNITENQVSRFNESLPALLIDVAVKAALSS 179

Query: 185 RKFATRTANFTALQTLYSLAQCTPDLSSSDCNVCLQAAIAELPNCCSGKTGAQVLIPSCI 244
           RKFAT  ANFT  QT+YSL QCTPDL++ DC  CL+  I  LP CC    G +V+ PSC 
Sbjct: 180 RKFATEKANFTVFQTIYSLVQCTPDLTNQDCESCLRQVINYLPRCCDRSVGGRVIAPSCS 239

Query: 245 VRYEFYPFYNLS----ATSPPPPAPVLLPPPPPGSARGKSGISSSTIIAIVAPIAVTAVL 300
            RYE YPFYN +      +PPP + V  PP    S +GK    +  + AI  P++V  VL
Sbjct: 240 FRYELYPFYNETIAAAPMAPPPSSTVTAPPLNIPSEKGKGKNLTVIVTAIAVPVSV-CVL 298

Query: 301 FIVGLCYFI-RKAKNKYNAVPEVNADNDITTLESLQFDFETIEVATNNFSTDNKLGEGGF 359
            +  +C+ + R+  NK +A  E   ++ IT+ E+LQF F  IE ATN FS  NKLG GGF
Sbjct: 299 LLGAMCWLLARRRNNKLSAETEDLDEDGITSTETLQFQFSAIEAATNKFSESNKLGHGGF 358

Query: 360 GEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKIL 419
           GEVYKG L +G+ +A+KRLS+ S QG +EFKNEV +VAKLQHRNL +LLG+CL+GEEKIL
Sbjct: 359 GEVYKGQLITGETVAIKRLSQGSTQGAEEFKNEVDVVAKLQHRNLAKLLGYCLDGEEKIL 418

Query: 420 VYEFVPNKSLDYFLYAQSPKNNNNW 444
           VYEFVPNKSLDYFL+    +   +W
Sbjct: 419 VYEFVPNKSLDYFLFDNEKRRVLDW 443

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: -

>sp|Q8GYA4|CRK10_ARATH Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana GN=CRK10 PE=1 SV=3

 Score =  405 bits (1041), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 228/425 (53%), Positives = 291/425 (68%), Gaps = 24/425 (5%)

Query: 31  AAADPTYAYHVC--SANFTGNSTYQTNRNLLLSSLPTNASRGNGYSSGFYNETTGQDPNK 88
           +A DPTY YH C  +AN+T NSTY  N   LL+SL   +SR   YS+GF N T GQ P++
Sbjct: 33  SAQDPTYVYHTCQNTANYTSNSTYNNNLKTLLASL---SSRNASYSTGFQNATVGQAPDR 89

Query: 89  VYGLFLCRGDQTASSCQDCVTFATRDLVQRCPDGKQTIIWYDQCLLRYSNRSIFSTMDTV 148
           V GLF CRGD +   C+ CV+FA  D + RCP+ K+  ++YD+C+LRYSN++I ST+ T 
Sbjct: 90  VTGLFNCRGDVSTEVCRRCVSFAVNDTLTRCPNQKEATLYYDECVLRYSNQNILSTLITT 149

Query: 149 PYVSLLNTQNVTDRGRFNQI--LASLMSQVVNQA----VNNSRKFATRTANFTALQTLYS 202
             V L+NT+NVT     NQ+  L+ L+   +NQA    +N+S+KF TR  NFTALQ+ Y 
Sbjct: 150 GGVILVNTRNVTS----NQLDLLSDLVLPTLNQAATVALNSSKKFGTRKNNFTALQSFYG 205

Query: 203 LAQCTPDLSSSDCNVCLQAAIAELPNCCSGKTGAQVLIPSCIVRYEFYPFYNLSATSPPP 262
           L QCTPDL+  DC+ CLQ  I ++P   + + GA+++ PSC  RYE Y FY  SA  PPP
Sbjct: 206 LVQCTPDLTRQDCSRCLQLVINQIP---TDRIGARIINPSCTSRYEIYAFYTESAVPPPP 262

Query: 263 PAPVLLPP---PPPGSARGKSGISSSTIIAIVAPIAVTAVLFIVGLCYFIRKAKNKYNAV 319
           P P +  P    PP S  GK G S   +IAIV PI V  +LFI G C+  R+A+  Y   
Sbjct: 263 PPPSISTPPVSAPPRS--GKDGNSKVLVIAIVVPIIVAVLLFIAGYCFLTRRARKSY-YT 319

Query: 320 PEVNADNDITTLESLQFDFETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLS 379
           P   A +DITT +SLQ D+ TI+ AT++F   NK+G+GGFGEVYKG L  G E+AVKRLS
Sbjct: 320 PSAFAGDDITTADSLQLDYRTIQTATDDFVESNKIGQGGFGEVYKGTLSDGTEVAVKRLS 379

Query: 380 RSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPK 439
           +SSGQG  EFKNEVVLVAKLQHRNLVRLLGFCL+GEE++LVYE+VPNKSLDYFL+  + K
Sbjct: 380 KSSGQGEVEFKNEVVLVAKLQHRNLVRLLGFCLDGEERVLVYEYVPNKSLDYFLFDPAKK 439

Query: 440 NNNNW 444
              +W
Sbjct: 440 GQLDW 444

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9C5S8|CRK5_ARATH Cysteine-rich receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=CRK5 PE=1 SV=1

 Score =  362 bits (928), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 206/425 (48%), Positives = 273/425 (64%), Gaps = 30/425 (7%)

Query: 34  DPTYAYHVCSANFTGNSTYQTNRNLLLSSLPTNASRGNGY-SSGFYNETTGQDPNKVYGL 92
           DPTY  HVC+   + NS Y +N   LL+SL +N    N Y S G ++ T GQ+ + V+GL
Sbjct: 28  DPTYVGHVCTNRISRNSIYFSNLQTLLTSLSSN----NAYFSLGSHSLTKGQNSDMVFGL 83

Query: 93  FLCRGDQTASSCQDCVTFATRDLVQRCPDGKQTIIWYDQCLLRYSNRSIFSTMDTVPYVS 152
           +LC+GD +  SC++CV FA +D   RCP GK+ +I YD+C+L YS+R+IF    T   + 
Sbjct: 84  YLCKGDLSPESCRECVIFAAKDTRSRCPGGKEFLIQYDECMLGYSDRNIFMDTVTTTTII 143

Query: 153 LLNTQNVT--DRGRFNQILASLMSQVVNQAVNN-SRKFATRTANFTALQTLYSLAQCTPD 209
             NTQ VT     RFN  + SLM +   +A N+ S+KFA + ++F++ Q+LY+  QC PD
Sbjct: 144 TWNTQKVTADQSDRFNDAVLSLMKKSAEEAANSTSKKFAVKKSDFSSSQSLYASVQCIPD 203

Query: 210 LSSSDCNVCLQAAIAELPNCCSGKTGAQVLIPSCIVRYEFYPFYNLS--------ATSPP 261
           L+S DC +CLQ +I EL      K G + L+PSC  RYE YPFY  +          S P
Sbjct: 204 LTSEDCVMCLQQSIKEL---YFNKVGGRFLVPSCNSRYEVYPFYKETIEGTVLPPPVSAP 260

Query: 262 PPAPVLLPPPPPGSARGKSGISSSTIIAIVAPIAVTAVLFIVGLCYFI--RKAKNKYNAV 319
           P   V  P  PPG      G +S+ II  +      +VL  V +  F   ++AK  Y+  
Sbjct: 261 PLPLVSTPSFPPG-----KGKNSTVIIIAIVVPVAISVLICVAVFSFHASKRAKKTYD-T 314

Query: 320 PEVNADNDITTLESLQFDFETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLS 379
           PE   ++DITT  SLQFDF+ IE AT+ FS  NKLG+GGFG+VYKG LP+G ++AVKRLS
Sbjct: 315 PE---EDDITTAGSLQFDFKVIEAATDKFSMCNKLGQGGFGQVYKGTLPNGVQVAVKRLS 371

Query: 380 RSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPK 439
           ++SGQG +EFKNEVV+VAKLQHRNLV+LLGFCLE EEKILVYEFV NKSLDYFL+    +
Sbjct: 372 KTSGQGEKEFKNEVVVVAKLQHRNLVKLLGFCLEREEKILVYEFVSNKSLDYFLFDSRMQ 431

Query: 440 NNNNW 444
           +  +W
Sbjct: 432 SQLDW 436

Involved in multiple distinct defense responses. May function as a disease resistance (R) protein.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|O65482|CRK23_ARATH Putative cysteine-rich receptor-like protein kinase 23 OS=Arabidopsis thaliana GN=CRK23 PE=2 SV=1

 Score =  362 bits (928), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 216/477 (45%), Positives = 277/477 (58%), Gaps = 68/477 (14%)

Query: 30  TAAADPTYAYHVCS--ANFTGNSTYQTNRNLLLSSLPTNASRGNGYSSGFYNETTGQDPN 87
           T+A DPTY YHVC   A F  +STY TN   LLS+L   +S    YS+GF N T G+ P+
Sbjct: 134 TSALDPTYVYHVCPSWATFPRSSTYMTNLITLLSTL---SSPSASYSTGFQNATAGKHPD 190

Query: 88  KVYGLFLCRGDQTASSCQDCVTFATRDLVQRCPDGKQTIIWYDQCLLRYSNRSIFSTMDT 147
           +V GLF CRGD +   C+ CV+FA  +   RCP  K+  ++YDQC LRYSNR+I ST +T
Sbjct: 191 RVTGLFNCRGDVSPEVCRRCVSFAVNETSTRCPIEKEVTLYYDQCTLRYSNRNILSTSNT 250

Query: 148 VPYVSLLNTQNVT--DRGRFNQILASLMSQVVNQAVNNSRKFATRTANFTALQTLYSLAQ 205
              + L N+QN+T  ++ RF  ++ + M+Q    A N+S++F  R+ANFT L +LY+L Q
Sbjct: 251 NGGIILANSQNMTSNEQARFKDLVLTTMNQATIAAANSSKRFDARSANFTTLHSLYTLVQ 310

Query: 206 CTPDLSSSDCNVCLQAAIAELPNCCSGKTGAQVLIPSCIVRYEFYPFYNLSATSPPPPA- 264
           CT DL+  DC  CLQ  I +LP   + K G Q ++PSC  R+E   FYN SA + P P  
Sbjct: 311 CTHDLTRQDCLSCLQQIINQLP---TEKIGGQFIVPSCSSRFELCLFYNQSAVTTPQPQQ 367

Query: 265 ----------------------PV--------------LLPP-------PPPGSARGKSG 281
                                 P+              LL P              GK G
Sbjct: 368 NSAPPPPPTSIPSPRPGLNSRFPLITCLSAVSFEKFKDLLKPGFICILIKIVSENTGKGG 427

Query: 282 ISSSTIIAIVAPIAVTAVLFIVGLCYFIRKAKNKYNAVPEVNAD--------------ND 327
            SS  IIA+V  I    +LF+       ++ K    A+P +N                + 
Sbjct: 428 NSSVIIIAVVVSITALLLLFVAVFSVRTKRRKKMIGAIPLLNVKRKDTEVTEPLAENGDS 487

Query: 328 ITTLESLQFDFETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQ 387
           ITT  SLQFDF+ I  ATNNF   NKLG+GGFGEVYKG  PSG ++AVKRLS++SGQG +
Sbjct: 488 ITTAGSLQFDFKAIVAATNNFLPINKLGQGGFGEVYKGTFPSGVQVAVKRLSKTSGQGER 547

Query: 388 EFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPKNNNNW 444
           EF+NEVV+VAKLQHRNLVRLLG+CLEGEEKILVYEFV NKSLDYFL+  + K   +W
Sbjct: 548 EFENEVVVVAKLQHRNLVRLLGYCLEGEEKILVYEFVHNKSLDYFLFDTTMKRQLDW 604

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|O65468|CRK8_ARATH Cysteine-rich receptor-like protein kinase 8 OS=Arabidopsis thaliana GN=CRK8 PE=2 SV=2

 Score =  355 bits (910), Expect = 6e-97,   Method: Compositional matrix adjust.
 Identities = 188/424 (44%), Positives = 267/424 (62%), Gaps = 15/424 (3%)

Query: 31  AAADPTYAYHVC--SANFTGNSTYQTNRNLLLSSLPTNASRGNGYSSGFYNETTGQDPNK 88
           +A +P Y  H C     ++ NSTY TN   LLSS    ASR   YS+GF N   GQ P++
Sbjct: 33  SAQNPFYLNHDCPNRTTYSSNSTYSTNLKTLLSSF---ASRNASYSTGFQNIRAGQTPDR 89

Query: 89  VYGLFLCRGDQTASSCQDCVTFATRDLVQRCPDGKQTIIWYDQCLLRYSNRSIFSTMDTV 148
           V GLFLCRGD +   C +CV F+  + + RCP+ ++ + +Y++C+LRYS+++  ST+   
Sbjct: 90  VTGLFLCRGDLSPEVCSNCVAFSVNESLTRCPNQREAVFYYEECILRYSHKNFLSTVTYE 149

Query: 149 PYVSLLNTQNVT----DRGRFNQILASLMSQVVNQAVNNSRKFATRTANFTALQTLYSLA 204
             + + N  N++     R +F  ++ S M+Q  N+A N+SRKF+T     T+LQTLY L 
Sbjct: 150 GELIMRNPNNISSIQNQRDQFIDLVQSNMNQAANEAANSSRKFSTIKTELTSLQTLYGLV 209

Query: 205 QCTPDLSSSDCNVCLQAAIAELPNCCSGKTGAQVLIPSCIVRYEFYPFYNLSAT---SPP 261
           QCTPDL+  DC  CL ++I  +      + GA+   PSC  RYE Y FYN +A    SPP
Sbjct: 210 QCTPDLARQDCFSCLTSSINRMMPLF--RIGARQFWPSCNSRYELYAFYNETAIGTPSPP 267

Query: 262 PPAPVLLPPPPPGSARGKSGISSSTIIAIVAPIAVTAVLFIVGLCYFIRKAKNKYNAVPE 321
           P  P   PP    S  GKSG +S+ ++  +  +AV   + +VG C+  ++ K  ++    
Sbjct: 268 PLFPGSTPPLTSPSIPGKSG-NSTVLVVAIVVLAVLLFIALVGYCFLAQRTKKTFDTASA 326

Query: 322 VNADNDITTLESLQFDFETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRS 381
               +D+ T +SLQ D+ TI+ ATN+F+  NK+G GGFGEVYKG   +G+E+AVKRLS++
Sbjct: 327 SEVGDDMATADSLQLDYRTIQTATNDFAESNKIGRGGFGEVYKGTFSNGKEVAVKRLSKN 386

Query: 382 SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPKNN 441
           S QG  EFK EVV+VAKLQHRNLVRLLGF L+GEE+ILVYE++PNKSLD  L+  + +  
Sbjct: 387 SRQGEAEFKTEVVVVAKLQHRNLVRLLGFSLQGEERILVYEYMPNKSLDCLLFDPTKQTQ 446

Query: 442 NNWI 445
            +W+
Sbjct: 447 LDWM 450

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q8W4G6|CRK15_ARATH Cysteine-rich receptor-like protein kinase 15 OS=Arabidopsis thaliana GN=CRK15 PE=2 SV=2

 Score =  350 bits (898), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 196/422 (46%), Positives = 264/422 (62%), Gaps = 28/422 (6%)

Query: 37  YAYHVC--SANFTGNSTYQTNRNLLLSSLPT-NASRGNGYSSGFYNETTGQDPNKVYGLF 93
           Y  H+C  +  ++ NS Y TN   LLSSL   NAS    YS+GF +   GQ P++V GLF
Sbjct: 26  YIKHICPNTTTYSRNSPYLTNLRTLLSSLSAPNAS----YSTGFQSARAGQAPDRVTGLF 81

Query: 94  LCRGDQTASSCQDCVTFATRDLVQRCPDGKQTIIWYDQCLLRYSNRSIFSTMDTVPYVSL 153
           LCRGD + + C++CV F+  D + +CP  ++++ +YD+C+LRYS+++I ST+        
Sbjct: 82  LCRGDVSPAVCRNCVAFSINDTLVQCPSERKSVFYYDECMLRYSDQNILSTLAYDGAWIR 141

Query: 154 LNTQNVTDRG---RFNQILASLMSQVVNQAVNNSRKFATRTANFTALQTLYSLAQCTPDL 210
           +N     D+    RF   ++S M+Q   +A ++ RKF T  A +TALQTLY L QCTPDL
Sbjct: 142 MNGNISIDQNQMNRFKDFVSSTMNQAAVKAASSPRKFYTVKATWTALQTLYGLVQCTPDL 201

Query: 211 SSSDCNVCLQAAIAELPNCCSGKTGAQVLIPSCIVRYEFYPFYNLSATSPPPPAPV---- 266
           +  DC  CL+++I  +P     KTG + L  SC  RYE + FYN +        P     
Sbjct: 202 TRQDCFSCLESSIKLMP---LYKTGGRTLYSSCNSRYELFAFYNETTVRTQQAPPPLPPS 258

Query: 267 ----LLPPPPPGSARGKSGISSSTIIAIVAPIAVTAVLFIVGLCYFIRKAKNKYNAVPEV 322
               +  P  PG    KS  S+  ++AIV  I V A+L I G C F ++ KN  +  P  
Sbjct: 259 STPLVTSPSLPG----KSWNSNVLVVAIVLTILVAALLLIAGYC-FAKRVKNSSDNAPAF 313

Query: 323 NADNDITTLESLQFDFETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSS 382
           + D DITT ESLQ D+  I  ATN FS +NK+G+GGFGEVYKG   +G E+AVKRLS+SS
Sbjct: 314 DGD-DITT-ESLQLDYRMIRAATNKFSENNKIGQGGFGEVYKGTFSNGTEVAVKRLSKSS 371

Query: 383 GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPKNNN 442
           GQG  EFKNEVV+VAKLQHRNLVRLLGF + G E+ILVYE++PNKSLDYFL+  + +N  
Sbjct: 372 GQGDTEFKNEVVVVAKLQHRNLVRLLGFSIGGGERILVYEYMPNKSLDYFLFDPAKQNQL 431

Query: 443 NW 444
           +W
Sbjct: 432 DW 433

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9LZU4|CRK4_ARATH Cysteine-rich receptor-like protein kinase 4 OS=Arabidopsis thaliana GN=CRK4 PE=2 SV=1

 Score =  343 bits (880), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 203/456 (44%), Positives = 278/456 (60%), Gaps = 33/456 (7%)

Query: 11  FFMLFLFVIYLSISFQSSFTAAADPTYAY----HVCSAN---FTGNSTYQTNRNLLLSSL 63
           FF LF F+++LS  F  S +  + P   +    H C ++   ++ NSTY TN   L + L
Sbjct: 3   FFWLFPFLLHLS--FADSLSPLSAPVQNFIHLNHSCPSSILTYSRNSTYFTN---LKTLL 57

Query: 64  PTNASRGNGYSSGFYNETTGQDPNKVYGLFLCRGDQTASSCQDCVTFATRDLVQRCPDGK 123
            + +SR   YS+GF   T GQ P++V GLFLCRGD +   C++CV F+ ++ +  CP  K
Sbjct: 58  SSLSSRNASYSTGFQTATAGQAPDRVTGLFLCRGDVSQEVCRNCVAFSVKETLYWCPYNK 117

Query: 124 QTIIWYDQCLLRYSNRSIFSTMDTVPYVSLLNTQNVTDRGR-----FNQILASLMSQVVN 178
           + +++YD+C+LRYS+R+I ST+       LLN  N++   +     F  +++S ++    
Sbjct: 118 EVVLYYDECMLRYSHRNILSTVTYDGSAILLNGANISSSNQNQVDEFRDLVSSTLNLAAV 177

Query: 179 QAVNNSRKFATRTANFTALQTLYSLAQCTPDLSSSDCNVCLQAAIAELPNCCSGKTGAQV 238
           +A N+S+KF TR       Q LY L QCTPDL+  DC  CLQ +I  +      + G + 
Sbjct: 178 EAANSSKKFYTRKV--ITPQPLYLLVQCTPDLTRQDCLRCLQKSIKGMS---LYRIGGRF 232

Query: 239 LIPSCIVRYEFYPFYNLSATSPPPPA----------PVLLPPPPPGSARGKSGISSSTII 288
             PSC  RYE Y FYN +AT    P            + L PPP  S RGK G +SS II
Sbjct: 233 FYPSCNSRYENYSFYNETATRSSSPPSLPPRSTPQQQLKLAPPPLISERGK-GRNSSVII 291

Query: 289 AIVAPIAVTAVLFIVGLCYFIRKAKNKYNAVPEVNADNDITTLESLQFDFETIEVATNNF 348
            +V PI    +LF+       +K +  Y   P     +DITT  SLQFDF+ IE ATN F
Sbjct: 292 VVVVPIIALLLLFVAFFSLRAKKTRTNYEREPLTEESDDITTAGSLQFDFKAIEAATNKF 351

Query: 349 STDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLL 408
              NKLG+GGFGEVYKG+ PSG ++AVKRLS++SGQG +EF NEV++VAKLQHRNLVRLL
Sbjct: 352 CETNKLGQGGFGEVYKGIFPSGVQVAVKRLSKTSGQGEREFANEVIVVAKLQHRNLVRLL 411

Query: 409 GFCLEGEEKILVYEFVPNKSLDYFLYAQSPKNNNNW 444
           GFCLE +E+ILVYEFVPNKSLDYF++  + ++  +W
Sbjct: 412 GFCLERDERILVYEFVPNKSLDYFIFDSTMQSLLDW 447

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q8GWJ7|CRK19_ARATH Cysteine-rich receptor-like protein kinase 19 OS=Arabidopsis thaliana GN=CRK19 PE=2 SV=2

 Score =  340 bits (873), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 204/442 (46%), Positives = 271/442 (61%), Gaps = 34/442 (7%)

Query: 11  FFMLFLFVIYLSISFQSSFTAAADPT-YAYHVCSAN--FTGNSTYQTNRNLLLSSLPTNA 67
           F  LFLF         SS TA+A  T Y YH CS    F+ NSTY TN  L       ++
Sbjct: 7   FIFLFLF---------SSITASAQNTFYLYHNCSVTTTFSSNSTYSTN--LKTLLSSLSS 55

Query: 68  SRGNGYSSGFYNETTGQDPNKVYGLFLCRGDQTASSCQDCVTFATRDLVQRCPDGKQTII 127
              + YS+GF   T GQ P++V GLFLCR D ++  C+ CVTFA  + + RCP  K+ + 
Sbjct: 56  LNASSYSTGFQTATAGQAPDRVTGLFLCRVDVSSEVCRSCVTFAVNETLTRCPKDKEGVF 115

Query: 128 WYDQCLLRYSNRSIFSTMDTVPYVSLLNTQN--VTDRGRFNQILASLMSQVVNQAVNNSR 185
           +Y+QCLLRYSNR+I +T++T   + + + +N     + +F  ++ + M+    +A  + +
Sbjct: 116 YYEQCLLRYSNRNIVATLNTDGGMFMQSARNPLSVKQDQFRDLVLTPMNLAAVEAARSFK 175

Query: 186 KFATRTANFTALQTLYSLAQCTPDLSSSDCNVCLQAAIAELPNCCSGKTGAQVLIPSCIV 245
           K+A R  +  A Q+LY + +CTPDL   DC  CL+  I ++      K G ++L+PSC  
Sbjct: 176 KWAVRKIDLNASQSLYGMVRCTPDLREQDCLDCLKIGINQVT---YDKIGGRILLPSCAS 232

Query: 246 RYEFYPFYNLSATSPPPPAPVLLPPPPPGSARGKSGISSSTIIAIVAPIAVTAVLFIVGL 305
           RY+ Y FYN S    P  +      P PG    K G SS  IIA+V       VLF++ +
Sbjct: 233 RYDNYAFYNESNVGTPQDSS-----PRPG----KGGNSSVIIIAVVV---PITVLFLLLV 280

Query: 306 CYFIRKAKNKY---NAVPEVNADNDITTLESLQFDFETIEVATNNFSTDNKLGEGGFGEV 362
             F  +AKNK       P     NDITT  SLQFDF+ IE ATN F   NKLG+GGFGEV
Sbjct: 281 AVFSVRAKNKRTLNEKEPVAEDGNDITTAGSLQFDFKAIEAATNCFLPINKLGQGGFGEV 340

Query: 363 YKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE 422
           YKG L SG ++AVKRLS++SGQG +EF+NEVV+VAKLQHRNLV+LLG+CLEGEEKILVYE
Sbjct: 341 YKGTLSSGLQVAVKRLSKTSGQGEKEFENEVVVVAKLQHRNLVKLLGYCLEGEEKILVYE 400

Query: 423 FVPNKSLDYFLYAQSPKNNNNW 444
           FVPNKSLD+FL+  + K   +W
Sbjct: 401 FVPNKSLDHFLFDSTMKMKLDW 422

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|O65479|CRK20_ARATH Putative cysteine-rich receptor-like protein kinase 20 OS=Arabidopsis thaliana GN=CRK20 PE=2 SV=2

 Score =  339 bits (869), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 199/441 (45%), Positives = 273/441 (61%), Gaps = 40/441 (9%)

Query: 27  SSFTAAA-DPTYAYHVCS--ANFTGNSTYQTNRNLLLSSLPTNASRGNGYSSGFYNETTG 83
           +SFTA+A +P Y YH CS    ++ NSTY TN   L + L + +SR   YS+GF N T G
Sbjct: 17  TSFTASAQNPFYLYHNCSITTTYSSNSTYSTN---LKTLLSSLSSRNASYSTGFQNATAG 73

Query: 84  QDPNKVYGLFLCRGDQTASSCQDCVTFATRDLVQRCPDGKQTIIWYDQCLLRYSNRSIFS 143
           Q P+ V GLFLCRG+ +   C+ C+  +  + + RCP+ ++ + +Y+QC+LRYSNR+I S
Sbjct: 74  QAPDMVTGLFLCRGNVSPEVCRSCIALSVNESLSRCPNEREAVFYYEQCMLRYSNRNILS 133

Query: 144 TMDTVPYVSLLNTQN--VTDRGRFNQILASLMSQVVNQAVNNSRKFATRTANFTALQTLY 201
           T++T   V + N +N     + RF  ++ + M+    +A  + ++FA    +  ALQ+LY
Sbjct: 134 TLNTDGGVFMQNARNPISVKQDRFRDLVLNPMNLAAIEAARSIKRFAVTKFDLNALQSLY 193

Query: 202 SLAQCTPDLSSSDCNVCLQAAIAELPNCCSGKTGAQVLIPSCIVRYEFYPFYNLSATSPP 261
            + QCTPDL+  DC  CLQ +I ++      K G +  +PSC  RY+ Y FYN      P
Sbjct: 194 GMVQCTPDLTEQDCLDCLQQSINQV---TYDKIGGRTFLPSCTSRYDNYEFYNEFNVGTP 250

Query: 262 PPAPVLLPPPPPGSARGKSGISSSTIIAIVAPIAVTAVLFIVGLCYFIRKAKNK--YNAV 319
             +      P PG    K G SS  +IA+V PI V  +LF+    + +R+AK K    A+
Sbjct: 251 QDSS-----PRPG----KGGNSSVIVIAVVVPITVLFLLFVA--FFSVRRAKRKKTIGAI 299

Query: 320 P----------------EVNADNDITTLESLQFDFETIEVATNNFSTDNKLGEGGFGEVY 363
           P                E    +DITT  SLQFDF+ I  AT+ F   NKLG+GGFGEVY
Sbjct: 300 PLFKVKRKETEVTEPPAETTDGDDITTAGSLQFDFKAIVAATDIFLPINKLGQGGFGEVY 359

Query: 364 KGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF 423
           KG  PSG ++AVKRLS++SGQG +EF+NEVV+VAKLQHRNLV+LLG+CLEGEEKILVYEF
Sbjct: 360 KGTFPSGVQVAVKRLSKNSGQGEKEFENEVVVVAKLQHRNLVKLLGYCLEGEEKILVYEF 419

Query: 424 VPNKSLDYFLYAQSPKNNNNW 444
           VPNKSLDYFL+  + +   +W
Sbjct: 420 VPNKSLDYFLFDPTMQGQLDW 440

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q8H199|CRK14_ARATH Cysteine-rich receptor-like protein kinase 14 OS=Arabidopsis thaliana GN=CRK14 PE=2 SV=2

 Score =  337 bits (864), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 175/413 (42%), Positives = 250/413 (60%), Gaps = 25/413 (6%)

Query: 46  FTGNSTYQTNRNLLLSSLPTNAS-RGNGYSSGFYNETTGQDPNKVYGLFLCRGDQTASSC 104
           F   S Y+TNR LLLSSLP+N S RG     GFYN + GQ P++VY L +C        C
Sbjct: 31  FVPQSRYETNRGLLLSSLPSNVSARG-----GFYNSSIGQGPDRVYALGMCIEGAEPDVC 85

Query: 105 QDCVTFATRDLVQRCPDGKQTIIWYDQ---CLLRYSNRSIFSTMDTVPYVSLLNTQNVT- 160
            DC+ +A+  L+  C +  + + W ++   C++RYSN S F ++   P+  + N  ++T 
Sbjct: 86  SDCIEYASNLLLDTCLNQTEGLAWPEKRILCMVRYSNSSFFGSLKAEPHFYIHNVDDITS 145

Query: 161 DRGRFNQILASLMSQVVNQAVNNSRK---FATRTANFTALQTLYSLAQCTPDLSSSDCNV 217
           +   F+Q+   L  +++    + S K   +A   A  TA Q +Y+L QCTPDLS  DC++
Sbjct: 146 NLTEFDQVWEELARRMIASTTSPSSKRKYYAADVAALTAFQIIYALMQCTPDLSLEDCHI 205

Query: 218 CLQAAIAELPNCCSGKTGAQVLIPSCIVRYEFYPF---YNLSATSPPPPAPVLLPPPP-- 272
           CL+ ++ +   CC+GK G  V   SC+ R+E +PF   ++  + +PPP +P     P   
Sbjct: 206 CLRQSVGDYETCCNGKQGGIVYRASCVFRWELFPFSEAFSRISLAPPPQSPAFPTLPAVT 265

Query: 273 -PGSARGKSGISSSTIIAIVAPIAVTAVLFIVGLCYFIRKAKNKYNAVPEVNADNDITTL 331
              + +G   IS   + AI+ P  +   L ++ L + + + +  Y       +  DIT  
Sbjct: 266 NTATKKGSITISIGIVWAIIIPTVIVVFLVLLALGFVVYRRRKSYQG-----SSTDITIT 320

Query: 332 ESLQFDFETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKN 391
            SLQFDF+ IE ATN FS  N +G GGFGEV+ GVL +G E+A+KRLS++S QG +EFKN
Sbjct: 321 HSLQFDFKAIEDATNKFSESNIIGRGGFGEVFMGVL-NGTEVAIKRLSKASRQGAREFKN 379

Query: 392 EVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPKNNNNW 444
           EVV+VAKL HRNLV+LLGFCLEGEEKILVYEFVPNKSLDYFL+  + +   +W
Sbjct: 380 EVVVVAKLHHRNLVKLLGFCLEGEEKILVYEFVPNKSLDYFLFDPTKQGQLDW 432

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	451
255555031	674	ATP binding protein, putative [Ricinus c	0.902	0.603	0.601	1e-131
255555035	671	ATP binding protein, putative [Ricinus c	0.940	0.631	0.568	1e-130
255555033	579	ATP binding protein, putative [Ricinus c	0.882	0.687	0.593	1e-128
359474715	684	PREDICTED: cysteine-rich receptor-like p	0.940	0.619	0.568	1e-124
359474717	663	PREDICTED: cysteine-rich receptor-like p	0.869	0.591	0.586	1e-124
359496581	666	PREDICTED: cysteine-rich receptor-like p	0.900	0.609	0.538	1e-122
224113935	674	predicted protein [Populus trichocarpa]	0.915	0.612	0.542	1e-120
351721533	667	cysteine-rich protein precursor [Glycine	0.904	0.611	0.543	1e-120
357444315	562	Cysteine-rich receptor-like protein kina	0.926	0.743	0.521	1e-119
357444317	673	Cysteine-rich receptor-like protein kina	0.926	0.621	0.521	1e-119

>gi|255555031|ref|XP_002518553.1| ATP binding protein, putative [Ricinus communis] gi|223542398|gb|EEF43940.1| ATP binding protein, putative [Ricinus communis]

 Score =  476 bits (1225), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 254/422 (60%), Positives = 311/422 (73%), Gaps = 15/422 (3%)

Query: 34  DPTYAYHVCS--ANFTGNSTYQTNRNLLLSSLPTNASRGNGYSSGFYNETTGQDPNKVYG 91
           +P Y YHVCS    F  NSTYQTN N L  SL  NA+     S GFYN ++GQDP+ +YG
Sbjct: 27  EPVYLYHVCSNTTTFAPNSTYQTNLNQLFPSLSNNANN----SIGFYNRSSGQDPDDIYG 82

Query: 92  LFLCRGDQTASSCQDCVTFATRDLVQRCPDGKQTIIWYDQCLLRYSNRSIFSTMDTVPYV 151
           LFLCRGD +   CQDCVTFA++D+V+RCP  K  I+WYD+CLL Y+NRS++S M   P V
Sbjct: 83  LFLCRGDVSTDVCQDCVTFASQDIVKRCPIEKVAIVWYDECLLHYANRSLYSIMAQEPGV 142

Query: 152 SLLNTQNVTDRGRFNQILASLMSQVVNQAVN---NSRKFATRTANFTALQTLYSLAQCTP 208
            LLN QN+ D+ RFN +LA+ M ++  +A +     +KFA +  NFTA + LYSL QCTP
Sbjct: 143 FLLNVQNIADQDRFNNLLATTMGKLATEAASAASGEKKFAVKIDNFTAFEKLYSLVQCTP 202

Query: 209 DLSSSDCNVCLQAAIAELPNCCSGKTGAQVLIPSCIVRYEFYPFYNLSATSPPPPAPVLL 268
           DLS+ DC  CLQAAI+ LP CC GK G +VL PSC +RYE YPF+N++A  PPPP+P  +
Sbjct: 203 DLSNLDCGRCLQAAISNLPTCCDGKRGGRVLYPSCNIRYEVYPFFNVTALEPPPPSPSPV 262

Query: 269 PPPPPGSA------RGKSGISSSTIIAIVAPIAVTAVLFIVGLCYFIRKAKNKYNAVPEV 322
            PPPP S+      +GKSG+S+ TI+AIVAP+AV  V F +G CY  R+A+ KY+A  E 
Sbjct: 263 VPPPPTSSGTRPETKGKSGLSTVTIVAIVAPVAVAIVFFFLGCCYLRRRARKKYDAGQED 322

Query: 323 NADNDITTLESLQFDFETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSS 382
           +A N+ITT+ESLQ D  TIE AT+ FS  NKLGEGGFG+VYKG LP+GQEIAVK+LSRSS
Sbjct: 323 DAGNEITTVESLQIDLNTIEAATDKFSAANKLGEGGFGKVYKGTLPNGQEIAVKKLSRSS 382

Query: 383 GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPKNNN 442
            QG QEFKNEVVL+AKLQHRNLVRLLGFCLEG EKILVYEFVPNKSLDYFL+    +   
Sbjct: 383 VQGAQEFKNEVVLLAKLQHRNLVRLLGFCLEGAEKILVYEFVPNKSLDYFLFDAKKQGQL 442

Query: 443 NW 444
           +W
Sbjct: 443 DW 444

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255555035|ref|XP_002518555.1| ATP binding protein, putative [Ricinus communis] gi|223542400|gb|EEF43942.1| ATP binding protein, putative [Ricinus communis]

 Score =  469 bits (1208), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 254/447 (56%), Positives = 310/447 (69%), Gaps = 23/447 (5%)

Query: 10  KFFMLFLFVIYLSISFQSSFTAAADPTYAYHVCS--ANFTGNSTYQTNRNLLLSSLPTNA 67
           +F ++ LF++ L+I        A  P Y YH CS    FT NSTYQTN    L+ + ++ 
Sbjct: 6   RFPIILLFLLRLAI-----IVKAESPEYRYHFCSNTTTFTPNSTYQTN----LNQVLSSL 56

Query: 68  SRGNGYSSGFYNETTGQDPNKVYGLFLCRGDQTASSCQDCVTFATRDLVQRCPDGKQTII 127
           S     S GF+N  +GQ P+ VYG FLCRGD +   CQDCVTFAT+D+V+RCP  K  I+
Sbjct: 57  SNNANNSIGFFNIPSGQQPDDVYGSFLCRGDVSTDVCQDCVTFATQDIVKRCPIEKVAIV 116

Query: 128 WYDQCLLRYSNRSIFSTMDTVPYVSLLNTQNVTDRGRFNQILASLMSQVV---NQAVNNS 184
           WYDQCLLRY N+S  STMD  P V L NTQ+++D  RF+ +LA+ M  +    + A +  
Sbjct: 117 WYDQCLLRYENQSFISTMDQTPGVFLSNTQDISDPDRFDNLLATTMENLATDASSAASGE 176

Query: 185 RKFATRTANFTALQTLYSLAQCTPDLSSSDCNVCLQAAIAELPNCCSGKTGAQVLIPSCI 244
           +KFA    NFTA Q LYSL QCTPDLS+  C  CL+ AI+ LP+CC GK GA VL PSC 
Sbjct: 177 KKFAATDDNFTAFQKLYSLVQCTPDLSNPGCRQCLRGAISNLPSCCGGKRGANVLYPSCN 236

Query: 245 VRYEFYPFYNLSATSPPPPAPVLLPPPPPGSA-------RGKSGISSSTIIAIVAPIAVT 297
           VRYE YPF+N +A  PPPP+P    PPPP +         G+SGIS+  I+AIVAP+A+ 
Sbjct: 237 VRYEVYPFFNATAVEPPPPSPSPAVPPPPPTGSGTRPETEGQSGISTVIIVAIVAPVAIA 296

Query: 298 AVLFIVGLCYFIRKAKNKYNAVPEVNADNDITTLESLQFDFETIEVATNNFSTDNKLGEG 357
            VLF +  CY  R+ + KY+AV E    N+ITT+ESLQ D  T+E ATN FS DNKLGEG
Sbjct: 297 IVLFSLAYCYLRRRPRKKYDAVQE--DGNEITTVESLQIDLNTVEAATNKFSADNKLGEG 354

Query: 358 GFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEK 417
           GFGEVYKG+LP+GQEIAVK+LSRSSGQG QEFKNEVVL+AKLQHRNLVRLLGFCLEG EK
Sbjct: 355 GFGEVYKGILPNGQEIAVKKLSRSSGQGAQEFKNEVVLLAKLQHRNLVRLLGFCLEGAEK 414

Query: 418 ILVYEFVPNKSLDYFLYAQSPKNNNNW 444
           ILVYEFV NKSLDYFL+    +   +W
Sbjct: 415 ILVYEFVSNKSLDYFLFDPEKQRQLDW 441

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255555033|ref|XP_002518554.1| ATP binding protein, putative [Ricinus communis] gi|223542399|gb|EEF43941.1| ATP binding protein, putative [Ricinus communis]

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 251/423 (59%), Positives = 298/423 (70%), Gaps = 25/423 (5%)

Query: 39  YHVCS--ANFTGNSTYQTNRNLLLSSLPTNASRGNGYSSGFYNETTGQDPNKVYGLFLCR 96
           Y+VCS    FT NSTYQTN    L+ L ++ S     S GF+N  +GQ P+ VYG FLCR
Sbjct: 31  YYVCSNTTAFTPNSTYQTN----LNKLLSSLSNNANNSIGFFNIPSGQQPDDVYGSFLCR 86

Query: 97  GDQTASSCQDCVTFATRDLVQRCPDGKQTIIWYDQCLLRYSNRSIFSTMDTVPYVSLLNT 156
           GD +   CQDCVTFAT+D+V+RCP  K  I+WYD+CLLRY N+S  STMD  P + + NT
Sbjct: 87  GDVSTDVCQDCVTFATQDIVKRCPIEKVAIVWYDECLLRYENQSFISTMDQTPGLYMWNT 146

Query: 157 QNVT--DRGRFNQILASLMSQVVNQA---VNNSRKFATRTANFTALQTLYSLAQCTPDLS 211
           QN++  D+ RFN +LAS M+ +  +A    +  +KFA +  +FT+ Q LYSL QCTPDLS
Sbjct: 147 QNISTSDQVRFNALLASTMNNLATEASTAASGEKKFAVKEDSFTSFQKLYSLVQCTPDLS 206

Query: 212 SSDCNVCLQAAIAELPNCCSGKTGAQVLIPSCIVRYEFYPFYNLSATSPPPPAPVL---- 267
           +SDC  CLQ AI+ LP+CC GK G +VL PSC +RYE Y F+N +A  PPPPAP      
Sbjct: 207 TSDCGQCLQTAISNLPSCCGGKQGGRVLYPSCNIRYEVYLFFNATALEPPPPAPSPVVPL 266

Query: 268 ------LPPPPPGSARGKSGISSSTIIAIVAPIAVTAVLFIVGLCYFIRKAKNKYNAVPE 321
                 L   P     GK GIS+ TIIAIVAPIAV  VLF +G CY  R+   KY AV E
Sbjct: 267 PPPPTGLGAKP--QIEGKRGISTVTIIAIVAPIAVATVLFSLGCCYLRRR--KKYEAVQE 322

Query: 322 VNADNDITTLESLQFDFETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRS 381
            +A N+ITT ESLQ D  TIEVATN FS DNKLGEGGFGEVYKG LP+GQEIAVK+LSRS
Sbjct: 323 DDARNEITTAESLQIDLNTIEVATNKFSADNKLGEGGFGEVYKGTLPNGQEIAVKKLSRS 382

Query: 382 SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPKNN 441
           SGQG +EFKNEV L+AKLQHRNLVRLLGFCLEG EKILVYEFVPNKSLDYFL+    +  
Sbjct: 383 SGQGAEEFKNEVALLAKLQHRNLVRLLGFCLEGAEKILVYEFVPNKSLDYFLFDPEKQAQ 442

Query: 442 NNW 444
            +W
Sbjct: 443 LDW 445

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359474715|ref|XP_003631522.1| PREDICTED: cysteine-rich receptor-like protein kinase 25-like isoform 2 [Vitis vinifera]

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 258/454 (56%), Positives = 305/454 (67%), Gaps = 30/454 (6%)

Query: 13  MLFLFVIYLSISFQSSFTAAADPTYAYHVCSANFT--GNSTYQTNRNLLLSSLPTNASRG 70
           +LFL  + L+IS        A P Y +HVCS   T   NSTYQTN N LLSSL +NA+R 
Sbjct: 9   LLFLCALGLAIS---CLAIQAAPDYIHHVCSNTTTIQPNSTYQTNLNSLLSSLSSNATRA 65

Query: 71  NGYSSGFYNETTGQDPNKVYGLFLCRGDQTASSCQDCVTFATRDLVQRCPDGKQTIIWYD 130
           NG    FYN T GQ P+  YGLFLCRGD     C+DCV  A+ +++Q+C   K+ IIWYD
Sbjct: 66  NG----FYNATAGQSPDVAYGLFLCRGDVAIDDCRDCVANASAEILQQCSGVKKAIIWYD 121

Query: 131 QCLLRYSNRSIFSTMDTVPYVSLLNTQNVTDRGRFNQILASLMSQVVNQAVNNS--RKFA 188
           QC+L YSNRSIFS ++  P + L N QNVTD G FNQ++   M+     A N+   +KFA
Sbjct: 122 QCMLHYSNRSIFSRVEENPMLQLYNLQNVTDPGPFNQLVVDTMNATATLAANDESGKKFA 181

Query: 189 TRTANFTALQTLYSLAQCTPDLSSSDCNVCLQAAIAELPNCCSGKTGAQVLIPSCIVRYE 248
           T+  NFT  QTLYSL QCTPDLS +DC+ CL+ AI  L  CCSGK GA+ L PSC  RYE
Sbjct: 182 TKEENFTGSQTLYSLVQCTPDLSIADCSKCLEGAIGALSLCCSGKQGARTLTPSCNARYE 241

Query: 249 FYPFYNLSA-------TSPPPPAPVLLPPPPPG---------SARGKSGISSSTIIAIVA 292
            YPFY L A          P  A VLLPPPP           S  GK GISS TI+ IV 
Sbjct: 242 LYPFYQLEAGPLAPALAPAPTSATVLLPPPPAPSSKSSATEPSTEGKGGISSKTIVIIVV 301

Query: 293 PIAVTAVLFIVGLCY-FIRK-AKNKYNAVPEVNADNDITTLESLQFDFETIEVATNNFST 350
           P  V+ V+F + LCY FIR+ AK +Y+ +   N + +ITT +SLQFD  TI+ ATNNFS 
Sbjct: 302 PTFVSVVIFSI-LCYCFIRRCAKKRYDTLEAENVEFNITTEQSLQFDLATIQAATNNFSD 360

Query: 351 DNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGF 410
            NK+GEGGFG VYKG L SGQEIA+KRLS+SSGQG  EFKNEVVLVAKLQHRNLVRLLGF
Sbjct: 361 HNKIGEGGFGAVYKGTLSSGQEIAIKRLSKSSGQGAVEFKNEVVLVAKLQHRNLVRLLGF 420

Query: 411 CLEGEEKILVYEFVPNKSLDYFLYAQSPKNNNNW 444
           CLEGEEKILVYE+VPNKSLDYFL+    +   +W
Sbjct: 421 CLEGEEKILVYEYVPNKSLDYFLFDPDKRGQLDW 454

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359474717|ref|XP_002267916.2| PREDICTED: cysteine-rich receptor-like protein kinase 25-like isoform 1 [Vitis vinifera]

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 240/409 (58%), Positives = 284/409 (69%), Gaps = 17/409 (4%)

Query: 35  PTYAYHVC--SANFTGNSTYQTNRNLLLSSLPTNASRGNGYSSGFYNETTGQDPNKV-YG 91
           P Y YH+C  +  F  NS+Y+TN N  LSSL +NA+R     +GFYN T G+ P  V YG
Sbjct: 22  PGYLYHICPNTTTFNPNSSYETNLNFALSSLSSNATR----DTGFYNVTAGRTPPDVAYG 77

Query: 92  LFLCRGDQTASSCQDCVTFATRDLV-QRCPDGKQTIIWYDQCLLRYSNRSIFSTMDTVPY 150
           LFLCRGD T+  CQDCV  A  + V QRC   KQ IIWYD+C+LRYSN S FS +   P 
Sbjct: 78  LFLCRGDVTSQVCQDCVATAVNETVRQRCRGFKQAIIWYDECMLRYSNESFFSQVSESPR 137

Query: 151 VSLLNTQNVTDRGRFNQILASLMSQVVNQAVNN--SRKFATRTANFTALQTLYSLAQCTP 208
           VS+ NTQN+T+  +FNQ+L   +  +  QAVN+   +KFAT+  NFT  Q +YSL QCTP
Sbjct: 138 VSMWNTQNITEPDQFNQVLGDTLDSIRTQAVNDQSGKKFATKEENFTGFQRVYSLVQCTP 197

Query: 209 DLSSSDCNVCLQAAIAELPNCCSGKTGAQVLIPSCIVRYEFYPFYNLSATSPPPPAPVLL 268
           DLS   C+ CL   IA LP+CC GK GA+VL PSC VRYE YPFY     S   P     
Sbjct: 198 DLSPDQCDRCLIGTIAILPDCCGGKQGARVLFPSCNVRYELYPFYQ----SVAAPPSPPP 253

Query: 269 PPPPPGSARGKSGISSSTIIAIVAPIAVTAVLFIVGLCY-FIRK-AKNKYNAVPEVNADN 326
             P   S  GK GISS TI+ IV P  V+ V+F + LCY FIR+ AK +Y+ +   N + 
Sbjct: 254 ARPSEPSTEGKGGISSKTIVIIVVPTFVSVVIFSI-LCYCFIRRCAKKRYDTLEAENVEF 312

Query: 327 DITTLESLQFDFETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGG 386
           +ITT +SLQFD  TI+ ATNNFS  NK+GEGGFG VYKG L SGQEIA+KRLS+SSGQG 
Sbjct: 313 NITTEQSLQFDLATIQAATNNFSDHNKIGEGGFGAVYKGTLSSGQEIAIKRLSKSSGQGA 372

Query: 387 QEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYA 435
            EFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE+VPNKSLDYFL+ 
Sbjct: 373 VEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEYVPNKSLDYFLFG 421

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359496581|ref|XP_002270035.2| PREDICTED: cysteine-rich receptor-like protein kinase 10-like [Vitis vinifera]

 Score =  446 bits (1146), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 224/416 (53%), Positives = 293/416 (70%), Gaps = 10/416 (2%)

Query: 35  PTYAYHVCS--ANFTGNSTYQTNRNLLLSSLPTNASRGNGYSSGFYNETTGQDPNKVYGL 92
           PT  Y  C+  +N+  NSTYQ++ N+LL+SL ++A+  NG    F+N T GQ P+ VYGL
Sbjct: 26  PTLLYSFCTENSNYVPNSTYQSSLNVLLTSLSSDATILNGRK--FHNTTAGQAPDMVYGL 83

Query: 93  FLCRGDQTASSCQDCVTFATRDLVQRCPDGKQTIIWYDQCLLRYSNRSIFSTMDTVPYVS 152
           +LCRGD T + CQDCV  A+++++ +CP+ K+ + WYDQC+LRYSNRSIFS M+  P ++
Sbjct: 84  YLCRGDVTDAVCQDCVQTASQEILTKCPNRKEALSWYDQCMLRYSNRSIFSIMEERPMLT 143

Query: 153 LLNTQNVTDRGRFNQILASLMSQVVNQAVNNSRK---FATRTANFTALQTLYSLAQCTPD 209
           + N+ ++ D  RF+QI+   M  ++ +A +NS +   F T  ANF A   +Y L QCTPD
Sbjct: 144 MSNSLDMDDPDRFDQIVNKTMVGLIEKATHNSSERDMFETGEANFNASTKIYGLVQCTPD 203

Query: 210 LSSSDCNVCLQAAIAELPNCCSGKTGAQVLIPSCIVRYEFYPFYNLSATSPPPPAPVLLP 269
           LS S+C+ CL+   + + NCC GK GA++L+PSC  RYE YPFY     +   P      
Sbjct: 204 LSGSNCSTCLENIFSRITNCCLGKQGARILVPSCNFRYELYPFYG--DLAAATPPAPAPS 261

Query: 270 PPPPGSARGKSGISSSTIIAIVAPIAVTAVLF-IVGLCYFIRKAKNKYNAVPEVNADNDI 328
           P    S  GK G SS  +IAI+ P+AV+ V+F I+  C+  RKAK KY++  E   +NDI
Sbjct: 262 PLSLLSPPGKKGNSSQLLIAIIVPVAVSVVIFSILCYCFICRKAKKKYSSTEEEKVENDI 321

Query: 329 TTLESLQFDFETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQE 388
           TT++SLQFDF T+E ATNNFS DNK+GEGGFG+VYKG L SG+EIA+KRLSRSS QG  E
Sbjct: 322 TTVQSLQFDFGTLEAATNNFSDDNKIGEGGFGDVYKGTLSSGKEIAIKRLSRSSAQGAVE 381

Query: 389 FKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPKNNNNW 444
           FKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE+VPNKSLD FL+    +   +W
Sbjct: 382 FKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEYVPNKSLDCFLFDPDKQGQLDW 437

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224113935|ref|XP_002316618.1| predicted protein [Populus trichocarpa] gi|222859683|gb|EEE97230.1| predicted protein [Populus trichocarpa]

 Score =  437 bits (1123), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 231/426 (54%), Positives = 304/426 (71%), Gaps = 13/426 (3%)

Query: 30  TAAADPTYAYHVC--SANFTGNSTYQTNRNLLLSSLPTNASRGNGYSSGFYNETTGQDPN 87
           T A DPT+ Y  C  +  FT NSTYQ N NLLLSSL +NA+R N   +GFYN + GQDP+
Sbjct: 20  TQAQDPTFLYPYCPNTTTFTRNSTYQANLNLLLSSLSSNATRNN--INGFYNVSAGQDPD 77

Query: 88  KVYGLFLCRGDQTASSCQDCVTFATRDLVQRCPDGKQTIIWYDQCLLRYSNRSIFSTMDT 147
            VYG+FLCRGD + S C++CV FA +D+++RCP  K  +IW+D+C LRYSNR+IFST+D 
Sbjct: 78  AVYGMFLCRGDVSNSVCRNCVNFAAKDVLERCPIEKVAMIWFDECELRYSNRNIFSTVDQ 137

Query: 148 VPYVSLLNTQNVTDR-GRFNQILASLMSQVVNQAVN---NSRKFATRTANFTALQTLYSL 203
              + +++  NVT +  RFNQ++ + ++ +  +A +    ++KFA +  N+T +Q LY+L
Sbjct: 138 DFTLFMMSPNNVTVQPDRFNQLVETTINDIAARAASAPSGAKKFAVQQVNYTGIQKLYTL 197

Query: 204 AQCTPDLSSSDCNVCLQAAIAELPNCCSGKTGAQVLIPSCIVRYEFYPFYNLSATSPPPP 263
            QCTPDLS+ DC+ CLQ AI++L NCC+ K G +VL  SC  RYE Y FYN +A +   P
Sbjct: 198 VQCTPDLSTPDCSRCLQGAISKLGNCCNRKQGGRVLFASCNFRYELYEFYNATAAAEAAP 257

Query: 264 APVLLP-----PPPPGSARGKSGISSSTIIAIVAPIAVTAVLFIVGLCYFIRKAKNKYNA 318
            P  +         P + +GK G+S+  IIAI+ P+ V+ VLF +G C+  R+AK+  N+
Sbjct: 258 PPPPVALSPPPTSGPETRKGKGGVSTVLIIAILIPVTVSLVLFCLGFCFLSRRAKSNKNS 317

Query: 319 VPEVNADNDITTLESLQFDFETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRL 378
             E +  N+IT +ESLQFD  +I+ ATN+FS DNKLGEGGFGEVYKG LP+GQ IAVKRL
Sbjct: 318 AQENDVGNEITNVESLQFDLSSIQDATNHFSADNKLGEGGFGEVYKGTLPNGQAIAVKRL 377

Query: 379 SRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSP 438
           S+ SGQG  EFKNEV+LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYF++    
Sbjct: 378 SKGSGQGAAEFKNEVILVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFVFDPEK 437

Query: 439 KNNNNW 444
           +   +W
Sbjct: 438 QGLLDW 443

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351721533|ref|NP_001238492.1| cysteine-rich protein precursor [Glycine max] gi|223452302|gb|ACM89479.1| cysteine-rich protein [Glycine max]

 Score =  437 bits (1123), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 230/423 (54%), Positives = 289/423 (68%), Gaps = 15/423 (3%)

Query: 32  AADPTYAYHVCSA-NFTGNSTYQTNRNLLLSSLPTNASRGNGYSSGFYNETTG---QDPN 87
           ++ P Y YH CS  N T NS YQ N   LL+SL +NA+     ++ F N T G      +
Sbjct: 25  SSTPVYLYHNCSGGNTTANSAYQLNLRTLLTSLSSNAT-----TTEFSNNTVGLGTSPSD 79

Query: 88  KVYGLFLCRGDQTASSCQDCVTFATRDLVQRCPDGKQTIIWYDQCLLRYSNRSIFSTMDT 147
           +VYGLF+CRGD  ++ CQ CV  AT  L  +C   KQ +IWYD+C +RYSNRS FST+DT
Sbjct: 80  RVYGLFMCRGDVPSALCQQCVVNATGRLRSQCSLAKQAVIWYDECTVRYSNRSFFSTVDT 139

Query: 148 VPYVSLLNTQNVTDRGRFNQILASLMSQVVNQAVNNS---RKFATRTANFTALQTLYSLA 204
            P V LLNT N++++  F ++L   +++  ++A N S   +K+A   AN +  Q+LY LA
Sbjct: 140 RPRVGLLNTANISNQDSFMRLLFQTINRTADEAANFSVGLKKYAVNQANISGFQSLYCLA 199

Query: 205 QCTPDLSSSDCNVCLQAAIAELPNCCSGKTGAQVLIPSCIVRYEFYPFYNLSATSPPPPA 264
           QCTPDLS  +C  CL   I +LP CC GK G +VL PSC VRYE YPFY ++A+ P    
Sbjct: 200 QCTPDLSQENCRSCLSGVIGDLPWCCQGKQGGRVLYPSCNVRYELYPFYRVTASPPSSSP 259

Query: 265 PVLLPPPPPGS--ARGKSGISSSTIIAIVAPIAVTAVLFIVGLCYFIRKAKNKYN-AVPE 321
                 PPP S  + G SGIS+ TI+AIV PI V  ++FIVG+C+  R+A+ K   +V E
Sbjct: 260 SPPTLLPPPTSPISPGSSGISAGTIVAIVVPITVAVLIFIVGICFLSRRARKKQQGSVKE 319

Query: 322 VNADNDITTLESLQFDFETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRS 381
                DI T++SLQFDF TIE ATN FS DNKLGEGGFGEVYKG L SGQ +AVKRLS+S
Sbjct: 320 GKTAYDIPTVDSLQFDFSTIEAATNKFSADNKLGEGGFGEVYKGTLSSGQVVAVKRLSKS 379

Query: 382 SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPKNN 441
           SGQGG+EFKNEVV+VAKLQHRNLVRLLGFCL+GEEKILVYE+VPNKSLDY L+    +  
Sbjct: 380 SGQGGEEFKNEVVVVAKLQHRNLVRLLGFCLQGEEKILVYEYVPNKSLDYILFDPEKQRE 439

Query: 442 NNW 444
            +W
Sbjct: 440 LDW 442

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357444315|ref|XP_003592435.1| Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|355481483|gb|AES62686.1| Cysteine-rich receptor-like protein kinase [Medicago truncatula]

 Score =  436 bits (1121), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 228/437 (52%), Positives = 300/437 (68%), Gaps = 19/437 (4%)

Query: 14  LFLFVIYLSISFQSSFTAAADPTYAYHVC--SANFTGNSTYQTNRNLLLSSLPTNASRGN 71
           +++F  +  I    +  AA D ++    C  +  F+ N+TYQTN N LLS L +N++  N
Sbjct: 17  VYVFFCFTLIITIITTQAATDLSFIQSYCPNTNTFSSNTTYQTNLNKLLSILSSNSTNKN 76

Query: 72  GYSSGFYNETTGQDP-NKVYGLFLCRGDQTASSCQDCVTFATRDLVQRCPDGKQTIIWYD 130
           G+   +Y      +P N VYG FLCRGD+T   C+DCV+ A+  + Q+CP  K+++IW  
Sbjct: 77  GF---YYTTVGANNPVNTVYGAFLCRGDRTQKECKDCVSAASNQIPQKCPKAKESVIWLA 133

Query: 131 QCLLRYSNRSIFSTMDTVPYVSLLNTQNVTDRGRFNQILASLMSQVVNQAVNN--SRKFA 188
           +C++RYSN S F+    VP ++L+NT  V ++ RF Q+LA  M+    +AVN    +KF 
Sbjct: 134 ECMIRYSNVSFFNVAAEVPVLALMNTGTVMEQNRFMQLLADTMNAAAVEAVNGGGDKKFG 193

Query: 189 TRTANFTALQTLYSLAQCTPDLSSSDCNVCLQAAIAELPNCCSGKTGAQVLIPSCIVRYE 248
           T+ ANF++ QTLY+LAQCTPDLS+S C  CL+ A   +P+CCSGK GA+VLIPSC +RYE
Sbjct: 194 TKVANFSSFQTLYTLAQCTPDLSNSGCEKCLKIATNYIPSCCSGKQGARVLIPSCNIRYE 253

Query: 249 FYPFYNLSATSPPPPAPVLLPPPPPGSARGKSGISSSTIIAIVAPIAVTAVLFIVGLCYF 308
            YPFY+     P P  P    P P G    KS  S   I+AIVAPI V  +L  + +C+ 
Sbjct: 254 LYPFYH-ELNVPAPDEP---RPNPQGK---KSRNSVVLIVAIVAPI-VIILLLTLFVCWI 305

Query: 309 IRKAKN-KYNAVPEVNADNDITTLESLQFDFETIEVATNNFSTDNKLGEGGFGEVYKGVL 367
           I K K  K+N+VP+ + +  I+ +E LQFDF+TI  ATNNFS DNKLGEGGFGEVYKG+L
Sbjct: 306 ISKMKRIKFNSVPQESVE--ISRVEFLQFDFDTIATATNNFSGDNKLGEGGFGEVYKGML 363

Query: 368 PSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNK 427
            +GQEIAVKRLSRSSGQG +EFKNEVVLVAKLQHRNLVR+LGFCL+GEEK+L+YEF+PNK
Sbjct: 364 FNGQEIAVKRLSRSSGQGIEEFKNEVVLVAKLQHRNLVRILGFCLDGEEKMLIYEFMPNK 423

Query: 428 SLDYFLYAQSPKNNNNW 444
           SLDYFL+     +  NW
Sbjct: 424 SLDYFLFDPEKAHQINW 440

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357444317|ref|XP_003592436.1| Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|355481484|gb|AES62687.1| Cysteine-rich receptor-like protein kinase [Medicago truncatula]

 Score =  436 bits (1120), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 228/437 (52%), Positives = 300/437 (68%), Gaps = 19/437 (4%)

Query: 14  LFLFVIYLSISFQSSFTAAADPTYAYHVC--SANFTGNSTYQTNRNLLLSSLPTNASRGN 71
           +++F  +  I    +  AA D ++    C  +  F+ N+TYQTN N LLS L +N++  N
Sbjct: 17  VYVFFCFTLIITIITTQAATDLSFIQSYCPNTNTFSSNTTYQTNLNKLLSILSSNSTNKN 76

Query: 72  GYSSGFYNETTGQDP-NKVYGLFLCRGDQTASSCQDCVTFATRDLVQRCPDGKQTIIWYD 130
           G+   +Y      +P N VYG FLCRGD+T   C+DCV+ A+  + Q+CP  K+++IW  
Sbjct: 77  GF---YYTTVGANNPVNTVYGAFLCRGDRTQKECKDCVSAASNQIPQKCPKAKESVIWLA 133

Query: 131 QCLLRYSNRSIFSTMDTVPYVSLLNTQNVTDRGRFNQILASLMSQVVNQAVNN--SRKFA 188
           +C++RYSN S F+    VP ++L+NT  V ++ RF Q+LA  M+    +AVN    +KF 
Sbjct: 134 ECMIRYSNVSFFNVAAEVPVLALMNTGTVMEQNRFMQLLADTMNAAAVEAVNGGGDKKFG 193

Query: 189 TRTANFTALQTLYSLAQCTPDLSSSDCNVCLQAAIAELPNCCSGKTGAQVLIPSCIVRYE 248
           T+ ANF++ QTLY+LAQCTPDLS+S C  CL+ A   +P+CCSGK GA+VLIPSC +RYE
Sbjct: 194 TKVANFSSFQTLYTLAQCTPDLSNSGCEKCLKIATNYIPSCCSGKQGARVLIPSCNIRYE 253

Query: 249 FYPFYNLSATSPPPPAPVLLPPPPPGSARGKSGISSSTIIAIVAPIAVTAVLFIVGLCYF 308
            YPFY+     P P  P    P P G    KS  S   I+AIVAPI V  +L  + +C+ 
Sbjct: 254 LYPFYH-ELNVPAPDEP---RPNPQGK---KSRNSVVLIVAIVAPI-VIILLLTLFVCWI 305

Query: 309 IRKAKN-KYNAVPEVNADNDITTLESLQFDFETIEVATNNFSTDNKLGEGGFGEVYKGVL 367
           I K K  K+N+VP+ + +  I+ +E LQFDF+TI  ATNNFS DNKLGEGGFGEVYKG+L
Sbjct: 306 ISKMKRIKFNSVPQESVE--ISRVEFLQFDFDTIATATNNFSGDNKLGEGGFGEVYKGML 363

Query: 368 PSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNK 427
            +GQEIAVKRLSRSSGQG +EFKNEVVLVAKLQHRNLVR+LGFCL+GEEK+L+YEF+PNK
Sbjct: 364 FNGQEIAVKRLSRSSGQGIEEFKNEVVLVAKLQHRNLVRILGFCLDGEEKMLIYEFMPNK 423

Query: 428 SLDYFLYAQSPKNNNNW 444
           SLDYFL+     +  NW
Sbjct: 424 SLDYFLFDPEKAHQINW 440

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	451
TAIR|locus:2121676	669	CRK10 "cysteine-rich RLK (RECE	0.937	0.632	0.488	8.3e-106
TAIR|locus:2115728	675	CRK25 "cysteine-rich RLK (RECE	0.935	0.625	0.470	3.8e-101
TAIR|locus:2121626	830	CRK23 "cysteine-rich RLK (RECE	0.485	0.263	0.467	2.4e-94
TAIR|locus:2121636	659	CRK7 "cysteine-rich RLK (RECEP	0.933	0.638	0.430	5.9e-89
TAIR|locus:2121686	645	CRK19 "cysteine-rich RLK (RECE	0.906	0.634	0.451	5.3e-88
TAIR|locus:2121651	676	CRK8 "cysteine-rich RLK (RECEP	0.946	0.631	0.414	8.6e-88
TAIR|locus:2077147	676	CRK4 "cysteine-rich RLK (RECEP	0.940	0.627	0.426	6.2e-85
TAIR|locus:2123111	669	CRK34 "cysteine-rich RLK (RECE	0.294	0.198	0.656	2.3e-82
TAIR|locus:2141762	665	CRK26 "cysteine-rich RLK (RECE	0.946	0.642	0.4	1.2e-79
TAIR|locus:2121691	667	CRK11 "cysteine-rich RLK (RECE	0.314	0.212	0.6	3.3e-77

TAIR|locus:2121676 CRK10 "cysteine-rich RLK (RECEPTOR-like protein kinase) 10" [Arabidopsis thaliana (taxid:3702)]

 Score = 1047 (373.6 bits), Expect = 8.3e-106, P = 8.3e-106
 Identities = 216/442 (48%), Positives = 278/442 (62%)

Query:     9 SKFFMLFLFVIYLSISFQSSFTAAA-DPTYAYHVC--SANFTGNSTYQTNRNLLLSSLPT 65
             S FF LFLF      SF +SF  +A DPTY YH C  +AN+T NSTY  N   LL+SL  
Sbjct:    16 SSFFFLFLF------SFLTSFRVSAQDPTYVYHTCQNTANYTSNSTYNNNLKTLLASL-- 67

Query:    66 NASRGNGYSSGFYNETTGQDPNKVYGLFLCRGDQTASSCQDCVTFATRDLVQRCPDGKQT 125
              +SR   YS+GF N T GQ P++V GLF CRGD +   C+ CV+FA  D + RCP+ K+ 
Sbjct:    68 -SSRNASYSTGFQNATVGQAPDRVTGLFNCRGDVSTEVCRRCVSFAVNDTLTRCPNQKEA 126

Query:   126 IIWYDQCLLRYSNRSIFSTMDTVPYVSLLNTQNVTDR--GRFNQILASLMSQVVNQAVNN 183
              ++YD+C+LRYSN++I ST+ T   V L+NT+NVT       + ++   ++Q    A+N+
Sbjct:   127 TLYYDECVLRYSNQNILSTLITTGGVILVNTRNVTSNQLDLLSDLVLPTLNQAATVALNS 186

Query:   184 SRKFATRTANFTALQTLYSLAQCTPDLSSSDCNVCLQAAIAELPNCCSGKTGAQVLIPSC 243
             S+KF TR  NFTALQ+ Y L QCTPDL+  DC+ CLQ  I ++P   + + GA+++ PSC
Sbjct:   187 SKKFGTRKNNFTALQSFYGLVQCTPDLTRQDCSRCLQLVINQIP---TDRIGARIINPSC 243

Query:   244 IVRYEFYPFYNXXXXXXXXXXXXXXXXXXXXXXR-GKSGXXXXXXXXXXXXXXXXXXLFI 302
               RYE Y FY                       R GK G                  LFI
Sbjct:   244 TSRYEIYAFYTESAVPPPPPPPSISTPPVSAPPRSGKDGNSKVLVIAIVVPIIVAVLLFI 303

Query:   303 VGLCYFIRKAKNKYNAVPEVNADNDITTLESLQFDFETIEVATNNFSTDNKLGEGGFGEV 362
              G C+  R+A+  Y   P   A +DITT +SLQ D+ TI+ AT++F   NK+G+GGFGEV
Sbjct:   304 AGYCFLTRRARKSYYT-PSAFAGDDITTADSLQLDYRTIQTATDDFVESNKIGQGGFGEV 362

Query:   363 YKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE 422
             YKG L  G E+AVKRLS+SSGQG  EFKNEVVLVAKLQHRNLVRLLGFCL+GEE++LVYE
Sbjct:   363 YKGTLSDGTEVAVKRLSKSSGQGEVEFKNEVVLVAKLQHRNLVRLLGFCLDGEERVLVYE 422

Query:   423 FVPNKSLDYFLYAQSPKNNNNW 444
             +VPNKSLDYFL+  + K   +W
Sbjct:   423 YVPNKSLDYFLFDPAKKGQLDW 444

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0006995 "cellular response to nitrogen starvation" evidence=RCA

TAIR|locus:2115728 CRK25 "cysteine-rich RLK (RECEPTOR-like protein kinase) 25" [Arabidopsis thaliana (taxid:3702)]

 Score = 1003 (358.1 bits), Expect = 3.8e-101, P = 3.8e-101
 Identities = 207/440 (47%), Positives = 267/440 (60%)

Query:    16 LFVIYLSISFQSSFTAAADPTYAYHVC--SANFTGNSTYQTNRNLLLSSLPTNASRGNGY 73
             LF ++L   F    T  +DPTY YH+C  +  ++ NS+Y TN   +LSSL   +S    Y
Sbjct:    11 LFSVFL---FMILKTVTSDPTYLYHICPNTTTYSRNSSYLTNLRTVLSSL---SSPNAAY 64

Query:    74 SSGFYNETTGQ--DPNKVYGLFLCRGDQTASSCQDCVTFATRDLVQRCPDGKQTIIWYDQ 131
             +S F N   G+  D N+VYG+FLCRGD +A  C+DCV FA  + +QRCP  K  +IWYD+
Sbjct:    65 ASLFDNAAAGEENDSNRVYGVFLCRGDVSAEICRDCVAFAANETLQRCPREKVAVIWYDE 124

Query:   132 CLLRYSNRSIFSTMDTVPYVSLLNTQNVTDR--GRFNQILASLMSQVVNQAVNNSRKFAT 189
             C++RYSN+SI   M   P V L N QN+T+    RFN+ L +L+  V  +A  +SRKFAT
Sbjct:   125 CMVRYSNQSIVGQMRIRPGVFLTNKQNITENQVSRFNESLPALLIDVAVKAALSSRKFAT 184

Query:   190 RTANFTALQTLYSLAQCTPDLSSSDCNVCLQAAIAELPNCCSGKTGAQVLIPSCIVRYEF 249
               ANFT  QT+YSL QCTPDL++ DC  CL+  I  LP CC    G +V+ PSC  RYE 
Sbjct:   185 EKANFTVFQTIYSLVQCTPDLTNQDCESCLRQVINYLPRCCDRSVGGRVIAPSCSFRYEL 244

Query:   250 YPFYNXXXXXXXXXXXXXXXXXX----XXXXRGKSGXXXXXXXXXXXXXXXXXXLFIVGL 305
             YPFYN                          +GK G                  L +  +
Sbjct:   245 YPFYNETIAAAPMAPPPSSTVTAPPLNIPSEKGK-GKNLTVIVTAIAVPVSVCVLLLGAM 303

Query:   306 CYFI-RKAKNKYNAVPEVNADNDITTLESLQFDFETIEVATNNFSTDNKLGEGGFGEVYK 364
             C+ + R+  NK +A  E   ++ IT+ E+LQF F  IE ATN FS  NKLG GGFGEVYK
Sbjct:   304 CWLLARRRNNKLSAETEDLDEDGITSTETLQFQFSAIEAATNKFSESNKLGHGGFGEVYK 363

Query:   365 GVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFV 424
             G L +G+ +A+KRLS+ S QG +EFKNEV +VAKLQHRNL +LLG+CL+GEEKILVYEFV
Sbjct:   364 GQLITGETVAIKRLSQGSTQGAEEFKNEVDVVAKLQHRNLAKLLGYCLDGEEKILVYEFV 423

Query:   425 PNKSLDYFLYAQSPKNNNNW 444
             PNKSLDYFL+    +   +W
Sbjct:   424 PNKSLDYFLFDNEKRRVLDW 443

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0000041 "transition metal ion transport" evidence=RCA

GO:0006826 "iron ion transport" evidence=RCA

GO:0010106 "cellular response to iron ion starvation" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

TAIR|locus:2121626 CRK23 "cysteine-rich RLK (RECEPTOR-like protein kinase) 23" [Arabidopsis thaliana (taxid:3702)]

 Score = 521 (188.5 bits), Expect = 2.4e-94, Sum P(2) = 2.4e-94
 Identities = 107/229 (46%), Positives = 145/229 (63%)

Query:    30 TAAADPTYAYHVCS--ANFTGNSTYQTNRNLLLSSLPTNASRGNGYSSGFYNETTGQDPN 87
             T+A DPTY YHVC   A F  +STY TN   LLS+L   +S    YS+GF N T G+ P+
Sbjct:   134 TSALDPTYVYHVCPSWATFPRSSTYMTNLITLLSTL---SSPSASYSTGFQNATAGKHPD 190

Query:    88 KVYGLFLCRGDQTASSCQDCVTFATRDLVQRCPDGKQTIIWYDQCLLRYSNRSIFSTMDT 147
             +V GLF CRGD +   C+ CV+FA  +   RCP  K+  ++YDQC LRYSNR+I ST +T
Sbjct:   191 RVTGLFNCRGDVSPEVCRRCVSFAVNETSTRCPIEKEVTLYYDQCTLRYSNRNILSTSNT 250

Query:   148 VPYVSLLNTQNVT--DRGRFNQILASLMSQVVNQAVNNSRKFATRTANFTALQTLYSLAQ 205
                + L N+QN+T  ++ RF  ++ + M+Q    A N+S++F  R+ANFT L +LY+L Q
Sbjct:   251 NGGIILANSQNMTSNEQARFKDLVLTTMNQATIAAANSSKRFDARSANFTTLHSLYTLVQ 310

Query:   206 CTPDLSSSDCNVCLQAAIAELPNCCSGKTGAQVLIPSCIVRYEFYPFYN 254
             CT DL+  DC  CLQ  I +LP   + K G Q ++PSC  R+E   FYN
Sbjct:   311 CTHDLTRQDCLSCLQQIINQLP---TEKIGGQFIVPSCSSRFELCLFYN 356

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0006952 "defense response" evidence=TAS

TAIR|locus:2121636 CRK7 "cysteine-rich RLK (RECEPTOR-like protein kinase) 7" [Arabidopsis thaliana (taxid:3702)]

 Score = 888 (317.7 bits), Expect = 5.9e-89, P = 5.9e-89
 Identities = 189/439 (43%), Positives = 260/439 (59%)

Query:    14 LFLFVIYLSISFQSSFTAAA-DPTYAYHVC--SANFTGNSTYQTNRNLLLSSLPTNASRG 70
             LF F+     SF +SF A+A DP +  + C  +  ++ NSTY TN   LLSSL   +SR 
Sbjct:     4 LFPFIFLFLFSFLTSFRASAQDPRFLAYYCPNATTYSSNSTYLTNLKTLLSSL---SSRN 60

Query:    71 NGYSSGFYNETTGQDPNKVYGLFLCRGDQTASSCQDCVTFATRDLVQRCPDGKQTIIWYD 130
               YS+GF N T GQ  ++V GLFLCRGD +   C++CVTFA  +   RCP+ ++ + +Y+
Sbjct:    61 ASYSTGFQNATVGQALDRVTGLFLCRGDVSPEVCRNCVTFAVNNTFSRCPNQREAVFYYE 120

Query:   131 QCLLRYSNRSIFSTMDTVPYVSLLNTQN----VTDR-GRFNQILASLMSQVVNQAVNNSR 185
             +C+LRYS+++I ST  T     +L   N    + ++  +F  ++ S M+Q+  +A +N R
Sbjct:   121 ECILRYSHKNILSTAITNEGEFILRNPNHISPIQNQINQFTNLVLSNMNQIAIEAADNPR 180

Query:   186 KFATRTANFTALQTLYSLAQCTPDLSSSDCNVCLQAAIAELPNCCSGKTGAQVLIPSCIV 245
             KF+T     TALQT Y L QCTPDLS  +C  CL ++I  +P     + GA+   PSC  
Sbjct:   181 KFSTIKTELTALQTFYGLVQCTPDLSRQNCMNCLTSSINRMP---FSRIGARQFWPSCNS 237

Query:   246 RYEFYPFYNXXXXXXXXXXXXXXXXXXXXXXRGKSGXXXXXXXXXXXXXXXXXXLFIVGL 305
             RYE Y FYN                        KSG                  +FI G 
Sbjct:   238 RYELYDFYNETAIGTPPPPLPPLASPSLSD---KSGNSNVVVVAVVVPIIVAVLIFIAGY 294

Query:   306 CYFIRKAKNKYNAVPEVNADNDITTLESLQFDFETIEVATNNFSTDNKLGEGGFGEVYKG 365
             C+F ++AK  Y   P ++ D D TT+ESLQ D+  I+ ATN+FS +NK+G GGFG+VYKG
Sbjct:   295 CFFAKRAKKTYGTTPALDED-DKTTIESLQLDYRAIQAATNDFSENNKIGRGGFGDVYKG 353

Query:   366 VLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVP 425
                +G E+AVKRLS++S QG  EFKNEVV+VA L+H+NLVR+LGF +E EE+ILVYE+V 
Sbjct:   354 TFSNGTEVAVKRLSKTSEQGDTEFKNEVVVVANLRHKNLVRILGFSIEREERILVYEYVE 413

Query:   426 NKSLDYFLYAQSPKNNNNW 444
             NKSLD FL+  + K    W
Sbjct:   414 NKSLDNFLFDPAKKGQLYW 432

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0034976 "response to endoplasmic reticulum stress" evidence=RCA

TAIR|locus:2121686 CRK19 "cysteine-rich RLK (RECEPTOR-like protein kinase) 19" [Arabidopsis thaliana (taxid:3702)]

 Score = 879 (314.5 bits), Expect = 5.3e-88, P = 5.3e-88
 Identities = 197/436 (45%), Positives = 264/436 (60%)

Query:    18 VIYLSISFQSSFTAAADPT-YAYHVCSAN--FTGNSTYQTNRNLLLSSLPT-NASRGNGY 73
             + ++ +   SS TA+A  T Y YH CS    F+ NSTY TN   LLSSL + NAS    Y
Sbjct:     5 ISFIFLFLFSSITASAQNTFYLYHNCSVTTTFSSNSTYSTNLKTLLSSLSSLNAS---SY 61

Query:    74 SSGFYNETTGQDPNKVYGLFLCRGDQTASSCQDCVTFATRDLVQRCPDGKQTIIWYDQCL 133
             S+GF   T GQ P++V GLFLCR D ++  C+ CVTFA  + + RCP  K+ + +Y+QCL
Sbjct:    62 STGFQTATAGQAPDRVTGLFLCRVDVSSEVCRSCVTFAVNETLTRCPKDKEGVFYYEQCL 121

Query:   134 LRYSNRSIFSTMDTVPYVSLLNTQNVTD--RGRFNQILASLMSQVVNQAVNNSRKFATRT 191
             LRYSNR+I +T++T   + + + +N     + +F  ++ + M+    +A  + +K+A R 
Sbjct:   122 LRYSNRNIVATLNTDGGMFMQSARNPLSVKQDQFRDLVLTPMNLAAVEAARSFKKWAVRK 181

Query:   192 ANFTALQTLYSLAQCTPDLSSSDCNVCLQAAIAELPNCCSGKTGAQVLIPSCIVRYEFYP 251
              +  A Q+LY + +CTPDL   DC  CL+  I ++      K G ++L+PSC  RY+ Y 
Sbjct:   182 IDLNASQSLYGMVRCTPDLREQDCLDCLKIGINQVTY---DKIGGRILLPSCASRYDNYA 238

Query:   252 FYNXXXXXXXXXXXXXXXXXXXXXXRGKSGXXXXXXXXXXXXXXXXXXLFIVGLCYFIRK 311
             FYN                       GK G                  LF++ +  F  +
Sbjct:   239 FYNESNVGTPQDSSPRP---------GKGGNSSVIIIAVVVPITV---LFLLLVAVFSVR 286

Query:   312 AKNK--YNAVPEVNAD-NDITTLESLQFDFETIEVATNNFSTDNKLGEGGFGEVYKGVLP 368
             AKNK   N    V  D NDITT  SLQFDF+ IE ATN F   NKLG+GGFGEVYKG L 
Sbjct:   287 AKNKRTLNEKEPVAEDGNDITTAGSLQFDFKAIEAATNCFLPINKLGQGGFGEVYKGTLS 346

Query:   369 SGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKS 428
             SG ++AVKRLS++SGQG +EF+NEVV+VAKLQHRNLV+LLG+CLEGEEKILVYEFVPNKS
Sbjct:   347 SGLQVAVKRLSKTSGQGEKEFENEVVVVAKLQHRNLVKLLGYCLEGEEKILVYEFVPNKS 406

Query:   429 LDYFLYAQSPKNNNNW 444
             LD+FL+  + K   +W
Sbjct:   407 LDHFLFDSTMKMKLDW 422

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009751 "response to salicylic acid stimulus" evidence=IEP

GO:0042742 "defense response to bacterium" evidence=IEP

GO:0005886 "plasma membrane" evidence=IDA

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

TAIR|locus:2121651 CRK8 "cysteine-rich RLK (RECEPTOR-like protein kinase) 8" [Arabidopsis thaliana (taxid:3702)]

 Score = 877 (313.8 bits), Expect = 8.6e-88, P = 8.6e-88
 Identities = 183/441 (41%), Positives = 255/441 (57%)

Query:    14 LFLFVIYLSISFQSSFTAAA-DPTYAYHVCS--ANFTGNSTYQTNRNLLLSSLPTNASRG 70
             L  F+     SF +SF A+A +P Y  H C     ++ NSTY TN   LLSS    ASR 
Sbjct:    15 LICFIFLFLFSFLTSFKASAQNPFYLNHDCPNRTTYSSNSTYSTNLKTLLSSF---ASRN 71

Query:    71 NGYSSGFYNETTGQDPNKVYGLFLCRGDQTASSCQDCVTFATRDLVQRCPDGKQTIIWYD 130
               YS+GF N   GQ P++V GLFLCRGD +   C +CV F+  + + RCP+ ++ + +Y+
Sbjct:    72 ASYSTGFQNIRAGQTPDRVTGLFLCRGDLSPEVCSNCVAFSVNESLTRCPNQREAVFYYE 131

Query:   131 QCLLRYSNRSIFSTMDTVPYVSLLNTQNVTD----RGRFNQILASLMSQVVNQAVNNSRK 186
             +C+LRYS+++  ST+     + + N  N++     R +F  ++ S M+Q  N+A N+SRK
Sbjct:   132 ECILRYSHKNFLSTVTYEGELIMRNPNNISSIQNQRDQFIDLVQSNMNQAANEAANSSRK 191

Query:   187 FATRTANFTALQTLYSLAQCTPDLSSSDCNVCLQAAIAELPNCCSGKTGAQVLIPSCIVR 246
             F+T     T+LQTLY L QCTPDL+  DC  CL ++I  +      + GA+   PSC  R
Sbjct:   192 FSTIKTELTSLQTLYGLVQCTPDLARQDCFSCLTSSINRMMPLF--RIGARQFWPSCNSR 249

Query:   247 YEFYPFYNXXXXXXXXXXXXXXXXXXXXXXRGKSGXXXXXXXXXXXXXXXXXXLFI--VG 304
             YE Y FYN                          G                  LFI  VG
Sbjct:   250 YELYAFYNETAIGTPSPPPLFPGSTPPLTSPSIPGKSGNSTVLVVAIVVLAVLLFIALVG 309

Query:   305 LCYFIRKAKNKYNAVPEVNADNDITTLESLQFDFETIEVATNNFSTDNKLGEGGFGEVYK 364
              C+  ++ K  ++        +D+ T +SLQ D+ TI+ ATN+F+  NK+G GGFGEVYK
Sbjct:   310 YCFLAQRTKKTFDTASASEVGDDMATADSLQLDYRTIQTATNDFAESNKIGRGGFGEVYK 369

Query:   365 GVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFV 424
             G   +G+E+AVKRLS++S QG  EFK EVV+VAKLQHRNLVRLLGF L+GEE+ILVYE++
Sbjct:   370 GTFSNGKEVAVKRLSKNSRQGEAEFKTEVVVVAKLQHRNLVRLLGFSLQGEERILVYEYM 429

Query:   425 PNKSLDYFLYAQSPKNNNNWI 445
             PNKSLD  L+  + +   +W+
Sbjct:   430 PNKSLDCLLFDPTKQTQLDWM 450

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2077147 CRK4 "cysteine-rich RLK (RECEPTOR-like protein kinase) 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 850 (304.3 bits), Expect = 6.2e-85, P = 6.2e-85
 Identities = 194/455 (42%), Positives = 261/455 (57%)

Query:    11 FFMLFLFVIYLSISFQSSFTAAADPTYAY--HVCSAN---FTGNSTYQTNRNLLLSSLPT 65
             FF LF F+++LS +   S  +A    + +  H C ++   ++ NSTY TN   LLSSL  
Sbjct:     3 FFWLFPFLLHLSFADSLSPLSAPVQNFIHLNHSCPSSILTYSRNSTYFTNLKTLLSSL-- 60

Query:    66 NASRGNGYSSGFYNETTGQDPNKVYGLFLCRGDQTASSCQDCVTFATRDLVQRCPDGKQT 125
              +SR   YS+GF   T GQ P++V GLFLCRGD +   C++CV F+ ++ +  CP  K+ 
Sbjct:    61 -SSRNASYSTGFQTATAGQAPDRVTGLFLCRGDVSQEVCRNCVAFSVKETLYWCPYNKEV 119

Query:   126 IIWYDQCLLRYSNRSIFSTMDTVPYVSLLNTQNVTDRGRFNQI--LASLMSQVVN----Q 179
             +++YD+C+LRYS+R+I ST+       LLN  N++   + NQ+     L+S  +N    +
Sbjct:   120 VLYYDECMLRYSHRNILSTVTYDGSAILLNGANISSSNQ-NQVDEFRDLVSSTLNLAAVE 178

Query:   180 AVNNSRKFATRTANFTALQTLYSLAQCTPDLSSSDCNVCLQAAIAELPNCCSGKTGAQVL 239
             A N+S+KF TR    T  Q LY L QCTPDL+  DC  CLQ +I  +      + G +  
Sbjct:   179 AANSSKKFYTRKV-ITP-QPLYLLVQCTPDLTRQDCLRCLQKSIKGMSLY---RIGGRFF 233

Query:   240 IPSCIVRYEFYPFYNXXXXXXXXXXXXXXXXXXXX----------XXRGKSGXXXXXXXX 289
              PSC  RYE Y FYN                                RGK G        
Sbjct:   234 YPSCNSRYENYSFYNETATRSSSPPSLPPRSTPQQQLKLAPPPLISERGK-GRNSSVIIV 292

Query:   290 XXXXXXXXXXLFIVGLCYFIRKAKNKYNAVPEVNADNDITTLESLQFDFETIEVATNNFS 349
                       LF+       +K +  Y   P     +DITT  SLQFDF+ IE ATN F 
Sbjct:   293 VVVPIIALLLLFVAFFSLRAKKTRTNYEREPLTEESDDITTAGSLQFDFKAIEAATNKFC 352

Query:   350 TDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLG 409
               NKLG+GGFGEVYKG+ PSG ++AVKRLS++SGQG +EF NEV++VAKLQHRNLVRLLG
Sbjct:   353 ETNKLGQGGFGEVYKGIFPSGVQVAVKRLSKTSGQGEREFANEVIVVAKLQHRNLVRLLG 412

Query:   410 FCLEGEEKILVYEFVPNKSLDYFLYAQSPKNNNNW 444
             FCLE +E+ILVYEFVPNKSLDYF++  + ++  +W
Sbjct:   413 FCLERDERILVYEFVPNKSLDYFIFDSTMQSLLDW 447

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0006952 "defense response" evidence=TAS

GO:0009751 "response to salicylic acid stimulus" evidence=IEP

GO:0012501 "programmed cell death" evidence=IMP

GO:0042742 "defense response to bacterium" evidence=IEP

TAIR|locus:2123111 CRK34 "cysteine-rich RLK (RECEPTOR-like protein kinase) 34" [Arabidopsis thaliana (taxid:3702)]

 Score = 457 (165.9 bits), Expect = 2.3e-82, Sum P(2) = 2.3e-82
 Identities = 88/134 (65%), Positives = 105/134 (78%)

Query:   311 KAKNKYNAVPEVNADNDITTLESLQFDFETIEVATNNFSTDNKLGEGGFGEVYKGVLPSG 370
             + K  Y    EV A ++ITT  SLQF F+TIE AT+ FS  N +G GGFGEVY+G L SG
Sbjct:   309 RRKKSYKTT-EVQATDEITTTHSLQFSFKTIEAATDKFSDSNMIGRGGFGEVYRGKLSSG 367

Query:   371 QEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLD 430
              E+AVKRLS++SGQG +EFKNE VLV+KLQH+NLVRLLGFCLEGEEKILVYEFVPNKSLD
Sbjct:   368 PEVAVKRLSKTSGQGAEEFKNEAVLVSKLQHKNLVRLLGFCLEGEEKILVYEFVPNKSLD 427

Query:   431 YFLYAQSPKNNNNW 444
             YFL+  + +   +W
Sbjct:   428 YFLFDPAKQGELDW 441

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2141762 CRK26 "cysteine-rich RLK (RECEPTOR-like protein kinase) 26" [Arabidopsis thaliana (taxid:3702)]

 Score = 800 (286.7 bits), Expect = 1.2e-79, P = 1.2e-79
 Identities = 178/445 (40%), Positives = 251/445 (56%)

Query:    13 MLFLFVIYLSISFQ-SSFTAAADPTYAYHVCS---ANFTGNSTYQTNRNLLLSSLPTNAS 68
             ML L +  +S+ FQ   FT  + P     +CS    NFT N+ Y  N + L+SSL  ++ 
Sbjct:     1 MLSLLLPLISLLFQIQCFTVKSQPVPLNQICSNVTGNFTVNTPYAVNLDRLISSL--SSL 58

Query:    69 RGNGYSSGFYNETTGQDPNKVYGLFLCRGDQTASSCQDCVTFATRDLVQRCPDGKQTIIW 128
             R N   +GFYN + G    KV  +  CRGD     C +C+  A + LV  CP  K+ IIW
Sbjct:    59 RRN--VNGFYNISVGDSDEKVNSISQCRGDVKLEVCINCIAMAGKRLVTLCPVQKEAIIW 116

Query:   129 YDQCLLRYSNRSIFSTMDTVPYVSLLNTQNVT-DRGRFNQILASLMSQVVNQA--VNNSR 185
             YD+C  RYSNR+IF+ ++  P+ S+  T+N T DR  + + L  L+  + N+A  +  S+
Sbjct:   117 YDKCTFRYSNRTIFNRLEISPHTSITGTRNFTGDRDSWEKSLRGLLEGLKNRASVIGRSK 176

Query:   186 K-FATRTANFTALQTLYSLAQCTPDLSSSDCNVCLQAAIAELPNCCSGKTGAQVLIPSCI 244
             K F     +  + QTL+ L QCTPD+S  DC+ CL   IA++P+CC  K G+ V+ PSC+
Sbjct:   177 KNFVVGETSGPSFQTLFGLVQCTPDISEEDCSYCLSQGIAKIPSCCDMKMGSYVMSPSCM 236

Query:   245 VRYEFYPFYNXXXXXXXXXXXXXXXXXXXXXXR----GKSGXXXXXXXXXXXXXXXXXXL 300
             + Y  + FY+                      R    G                     L
Sbjct:   237 LAYAPWRFYDPVDTDDPSSVPATPSRPPKNETRSVTQGDKNRGVPKALIFASASVAIVVL 296

Query:   301 FIVGLCYFIRKAKNKYNAVPEVNA-DNDITTLESLQFDFETIEVATNNFSTDNKLGEGGF 359
             FIV L  F+ K + K N     N  +N+  + +S++FDF  ++ AT++FS +NKLGEGGF
Sbjct:   297 FIVLLVVFL-KLRRKENIRNSENKHENENISTDSMKFDFSVLQDATSHFSLENKLGEGGF 355

Query:   360 GEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKIL 419
             G VYKGVL  GQ+IAVKRLS+++ QG  EFKNE +LVAKLQHRNLV+LLG+ +EG E++L
Sbjct:   356 GAVYKGVLSDGQKIAVKRLSKNAQQGETEFKNEFLLVAKLQHRNLVKLLGYSIEGTERLL 415

Query:   420 VYEFVPNKSLDYFLYAQSPKNNNNW 444
             VYEF+P+ SLD F++     N   W
Sbjct:   416 VYEFLPHTSLDKFIFDPIQGNELEW 440

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0006826 "iron ion transport" evidence=RCA

GO:0010106 "cellular response to iron ion starvation" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

TAIR|locus:2121691 CRK11 "cysteine-rich RLK (RECEPTOR-like protein kinase) 11" [Arabidopsis thaliana (taxid:3702)]

 Score = 440 (159.9 bits), Expect = 3.3e-77, Sum P(2) = 3.3e-77
 Identities = 87/145 (60%), Positives = 111/145 (76%)

Query:   300 LFIVGLCYFIRKAKNKYNAVPEVNADNDITTLESLQFDFETIEVATNNFSTDNKLGEGGF 359
             L ++G   F R+ K+ Y    +  +++DI+T +SL +DF+TIE ATN FST NKLGEGGF
Sbjct:   305 LLVLGFVLF-RRRKS-YQRT-KTESESDISTTDSLVYDFKTIEAATNKFSTSNKLGEGGF 361

Query:   360 GEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKIL 419
             G VYKG L +G ++AVKRLS+ SGQG +EF+NE VLV KLQHRNLVRLLGFCLE EE+IL
Sbjct:   362 GAVYKGKLSNGTDVAVKRLSKKSGQGTREFRNEAVLVTKLQHRNLVRLLGFCLEREEQIL 421

Query:   420 VYEFVPNKSLDYFLYAQSPKNNNNW 444
             +YEFV NKSLDYFL+    ++  +W
Sbjct:   422 IYEFVHNKSLDYFLFDPEKQSQLDW 446

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0006979 "response to oxidative stress" evidence=IEP;RCA

GO:0009816 "defense response to bacterium, incompatible interaction" evidence=IEP

GO:0016020 "membrane" evidence=ISS

GO:0009611 "response to wounding" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	451
pfam01657	106	pfam01657, Stress-antifung, Salt stress response/a	8e-33
pfam01657	106	pfam01657, Stress-antifung, Salt stress response/a	6e-25
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	1e-19
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	2e-19
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	2e-18
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	2e-16
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	2e-16
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	5e-15
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	7e-15
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	2e-14
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	1e-13
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	1e-12
cd05092	280	cd05092, PTKc_TrkA, Catalytic domain of the Protei	2e-12
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	2e-12
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	3e-12
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	4e-12
cd05093	288	cd05093, PTKc_TrkB, Catalytic domain of the Protei	1e-11
cd05036	277	cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro	1e-11
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	2e-11
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	2e-11
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	3e-11
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	3e-11
cd05033	266	cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec	1e-10
cd05046	275	cd05046, PTK_CCK4, Pseudokinase domain of the Prot	3e-10
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	3e-10
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	5e-10
cd05094	291	cd05094, PTKc_TrkC, Catalytic domain of the Protei	9e-10
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	2e-09
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	2e-09
cd05091	283	cd05091, PTKc_Ror2, Catalytic domain of the Protei	4e-09
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	4e-09
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	4e-09
cd05110	303	cd05110, PTKc_HER4, Catalytic domain of the Protei	4e-09
cd05090	283	cd05090, PTKc_Ror1, Catalytic domain of the Protei	4e-09
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	6e-09
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	3e-08
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	3e-08
cd05078	258	cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat	5e-08
cd05063	268	cd05063, PTKc_EphR_A2, Catalytic domain of the Pro	8e-08
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	9e-08
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	1e-07
cd05051	296	cd05051, PTKc_DDR, Catalytic domain of the Protein	1e-07
cd05035	273	cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li	3e-07
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	3e-07
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	4e-07
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	4e-07
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	4e-07
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	6e-07
cd05097	295	cd05097, PTKc_DDR_like, Catalytic domain of Discoi	6e-07
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	7e-07
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	7e-07
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	7e-07
cd05064	266	cd05064, PTKc_EphR_A10, Catalytic domain of the Pr	8e-07
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	8e-07
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	9e-07
cd05062	277	cd05062, PTKc_IGF-1R, Catalytic domain of the Prot	1e-06
cd05108	316	cd05108, PTKc_EGFR, Catalytic domain of the Protei	1e-06
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	2e-06
cd05037	259	cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) dom	2e-06
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	2e-06
cd05061	288	cd05061, PTKc_InsR, Catalytic domain of the Protei	5e-06
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	5e-06
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	5e-06
cd05079	284	cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma	6e-06
cd05111	279	cd05111, PTK_HER3, Pseudokinase domain of the Prot	7e-06
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	7e-06
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	7e-06
cd05096	304	cd05096, PTKc_DDR1, Catalytic domain of the Protei	7e-06
cd05065	269	cd05065, PTKc_EphR_B, Catalytic domain of the Prot	8e-06
cd05066	267	cd05066, PTKc_EphR_A, Catalytic domain of the Prot	9e-06
cd05095	296	cd05095, PTKc_DDR2, Catalytic domain of the Protei	1e-05
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	1e-05
cd05087	269	cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of t	1e-05
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	1e-05
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	2e-05
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	2e-05
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	2e-05
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	2e-05
cd05042	269	cd05042, PTKc_Aatyk, Catalytic domain of the Prote	2e-05
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	3e-05
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	3e-05
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	4e-05
cd05053	293	cd05053, PTKc_FGFR, Catalytic domain of the Protei	7e-05
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	7e-05
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	8e-05
cd05114	256	cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro	1e-04
cd05058	262	cd05058, PTKc_Met_Ron, Catalytic domain of the Pro	1e-04
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	1e-04
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	1e-04
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	1e-04
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	1e-04
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	1e-04
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	2e-04
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	2e-04
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	2e-04
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	3e-04
cd05075	272	cd05075, PTKc_Axl, Catalytic domain of the Protein	3e-04
cd05088	303	cd05088, PTKc_Tie2, Catalytic domain of the Protei	3e-04
cd05073	260	cd05073, PTKc_Hck, Catalytic domain of the Protein	3e-04
cd05082	256	cd05082, PTKc_Csk, Catalytic domain of the Protein	4e-04
cd05109	279	cd05109, PTKc_HER2, Catalytic domain of the Protei	4e-04
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	4e-04
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	5e-04
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	5e-04
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	5e-04
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	5e-04
cd07842	316	cd07842, STKc_CDK8_like, Catalytic domain of Cycli	6e-04
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	7e-04
cd05084	252	cd05084, PTKc_Fes, Catalytic domain of the Protein	7e-04
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	8e-04
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	9e-04
cd05115	257	cd05115, PTKc_Zap-70, Catalytic domain of the Prot	0.001
PLN00113	968	PLN00113, PLN00113, leucine-rich repeat receptor-l	0.001
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	0.002
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	0.002
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	0.002
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	0.002
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	0.002
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	0.002
cd06646	267	cd06646, STKc_MAP4K5, Catalytic domain of the Prot	0.004
cd05116	257	cd05116, PTKc_Syk, Catalytic domain of the Protein	0.004

>gnl|CDD|216632 pfam01657, Stress-antifung, Salt stress response/antifungal

 Score =  119 bits (300), Expect = 8e-33
 Identities = 48/108 (44%), Positives = 67/108 (62%), Gaps = 7/108 (6%)

Query: 39  YHVCSANFTG-----NSTYQTNRNLLLSSLPTNASRGNGYSSGFYNETTGQDPNKVYGLF 93
           +H+CS+N +G     NST+++N N LLSSL +NA+  +G   GF   T+G  P+ VYGL 
Sbjct: 1   FHLCSSNTSGNYTTANSTFESNLNALLSSLSSNAASSSG--KGFAAGTSGAAPDTVYGLA 58

Query: 94  LCRGDQTASSCQDCVTFATRDLVQRCPDGKQTIIWYDQCLLRYSNRSI 141
            CRGD +AS C+ C+  A  +L + CP+ K   IWYD C LRY +   
Sbjct: 59  QCRGDLSASDCRSCLATAVSELRRCCPNKKGGRIWYDSCFLRYESYPF 106

This domain is often found in association with the kinase domains pfam00069 or pfam07714. In many proteins it is duplicated. It contains six conserved cysteines which are involved in disulphide bridges. It has a role in salt stress response and has antifungal activity. Length = 106

>gnl|CDD|216632 pfam01657, Stress-antifung, Salt stress response/antifungal

 Score = 98.3 bits (245), Expect = 6e-25
 Identities = 43/101 (42%), Positives = 57/101 (56%), Gaps = 4/101 (3%)

Query: 155 NTQNV--TDRGRFNQILASLMSQVVNQAVNNSRK-FATRTANFTALQTLYSLAQCTPDLS 211
           NT     T    F   L +L+S + + A ++S K FA  T+   A  T+Y LAQC  DLS
Sbjct: 7   NTSGNYTTANSTFESNLNALLSSLSSNAASSSGKGFAAGTSG-AAPDTVYGLAQCRGDLS 65

Query: 212 SSDCNVCLQAAIAELPNCCSGKTGAQVLIPSCIVRYEFYPF 252
           +SDC  CL  A++EL  CC  K G ++   SC +RYE YPF
Sbjct: 66  ASDCRSCLATAVSELRRCCPNKKGGRIWYDSCFLRYESYPF 106

This domain is often found in association with the kinase domains pfam00069 or pfam07714. In many proteins it is duplicated. It contains six conserved cysteines which are involved in disulphide bridges. It has a role in salt stress response and has antifungal activity. Length = 106

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 88.0 bits (219), Expect = 1e-19
 Identities = 38/89 (42%), Positives = 49/89 (55%), Gaps = 6/89 (6%)

Query: 351 DNKLGEGGFGEVYKGVL-----PSGQEIAVKRL-SRSSGQGGQEFKNEVVLVAKLQHRNL 404
             KLGEG FGEVYKG L         E+AVK L   +S Q  +EF  E  ++ KL H N+
Sbjct: 4   GKKLGEGAFGEVYKGKLKGKGGKKKVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNV 63

Query: 405 VRLLGFCLEGEEKILVYEFVPNKSLDYFL 433
           V+LLG C E E   +V E++    L  +L
Sbjct: 64  VKLLGVCTEEEPLYIVMEYMEGGDLLSYL 92

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 87.2 bits (217), Expect = 2e-19
 Identities = 39/89 (43%), Positives = 51/89 (57%), Gaps = 6/89 (6%)

Query: 351 DNKLGEGGFGEVYKGVL-----PSGQEIAVKRL-SRSSGQGGQEFKNEVVLVAKLQHRNL 404
             KLGEG FGEVYKG L         E+AVK L   +S Q  +EF  E  ++ KL H N+
Sbjct: 4   GKKLGEGAFGEVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNI 63

Query: 405 VRLLGFCLEGEEKILVYEFVPNKSLDYFL 433
           V+LLG C E E  ++V E++P   L  +L
Sbjct: 64  VKLLGVCTEEEPLMIVMEYMPGGDLLDYL 92

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 84.5 bits (210), Expect = 2e-18
 Identities = 39/93 (41%), Positives = 52/93 (55%), Gaps = 6/93 (6%)

Query: 353 KLGEGGFGEVYKGVL-----PSGQEIAVKRLSRSSGQGG-QEFKNEVVLVAKLQHRNLVR 406
           KLGEG FGEVYKG L      +  ++AVK L   + +   +EF  E  ++ KL H N+VR
Sbjct: 6   KLGEGAFGEVYKGTLKGDGEGTETKVAVKTLKEGASEEEREEFLEEASIMKKLSHPNIVR 65

Query: 407 LLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPK 439
           LLG C +GE   +V E++P   L  FL     K
Sbjct: 66  LLGVCTQGEPLYIVTEYMPGGDLLDFLRKHGEK 98

Length = 258

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 78.7 bits (195), Expect = 2e-16
 Identities = 38/87 (43%), Positives = 48/87 (55%), Gaps = 5/87 (5%)

Query: 352 NKLGEGGFGEVYKGVL--PSGQEI--AVKRLSRS-SGQGGQEFKNEVVLVAKLQHRNLVR 406
            KLGEG FGEVYKG L    G+    AVK L    S +  ++F  E  ++ KL H N+VR
Sbjct: 1   KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVR 60

Query: 407 LLGFCLEGEEKILVYEFVPNKSLDYFL 433
           LLG C E E   LV E++    L  +L
Sbjct: 61  LLGVCTEEEPLYLVLEYMEGGDLLDYL 87

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 77.3 bits (191), Expect = 2e-16
 Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 2/94 (2%)

Query: 354 LGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGG-QEFKNEVVLVAKLQHRNLVRLLGFC 411
           LGEGGFG VY      +G+++A+K + +       +E   E+ ++ KL H N+V+L G  
Sbjct: 1   LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVF 60

Query: 412 LEGEEKILVYEFVPNKSLDYFLYAQSPKNNNNWI 445
            +     LV E+    SL   L     K + + I
Sbjct: 61  EDENHLYLVMEYCEGGSLKDLLKENEGKLSEDEI 94

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score = 74.8 bits (184), Expect = 5e-15
 Identities = 34/92 (36%), Positives = 53/92 (57%), Gaps = 7/92 (7%)

Query: 354 LGEGGFGEVYKG--VLPSGQE----IAVKRLSRS-SGQGGQEFKNEVVLVAKLQHRNLVR 406
           LGEG FG+VYKG    P+ +     +A+K L  +   +  QEF+ E  L++ LQH N+V 
Sbjct: 13  LGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVC 72

Query: 407 LLGFCLEGEEKILVYEFVPNKSLDYFLYAQSP 438
           LLG C + +   +++E++ +  L  FL   SP
Sbjct: 73  LLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSP 104

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 73.7 bits (182), Expect = 7e-15
 Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 2/93 (2%)

Query: 348 FSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQE-FKNEVVLVAKLQHRNLV 405
           +    KLGEG FG+VY      +G+ +A+K + +   +  +E    E+ ++ KL+H N+V
Sbjct: 1   YEILEKLGEGSFGKVYLARDKKTGKLVAIKVIKKKKIKKDRERILREIKILKKLKHPNIV 60

Query: 406 RLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSP 438
           RL     + ++  LV E+     L   L  +  
Sbjct: 61  RLYDVFEDEDKLYLVMEYCEGGDLFDLLKKRGR 93

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score = 72.9 bits (179), Expect = 2e-14
 Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 7/92 (7%)

Query: 354 LGEGGFGEVYKGVLPSGQE------IAVKRLSRSSGQGGQE-FKNEVVLVAKLQHRNLVR 406
           LGEG FG+V+ G     +       +AVK L  ++    ++ F+ E  L+   QH N+V+
Sbjct: 13  LGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVK 72

Query: 407 LLGFCLEGEEKILVYEFVPNKSLDYFLYAQSP 438
             G C EG+  I+V+E++ +  L+ FL +  P
Sbjct: 73  FYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGP 104

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 70.4 bits (173), Expect = 1e-13
 Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 3/84 (3%)

Query: 353 KLGEGGFGEVYKGVLPS-GQEIAVKRLSRSS--GQGGQEFKNEVVLVAKLQHRNLVRLLG 409
           KLG G FG VYK      G+ +AVK L + S   +  Q  + E+ ++ +L H N+VRL+ 
Sbjct: 6   KLGSGSFGTVYKAKHKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRLSHPNIVRLID 65

Query: 410 FCLEGEEKILVYEFVPNKSLDYFL 433
              + +   LV E+     L  +L
Sbjct: 66  AFEDKDHLYLVMEYCEGGDLFDYL 89

Length = 260

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score = 67.5 bits (165), Expect = 1e-12
 Identities = 35/107 (32%), Positives = 57/107 (53%), Gaps = 9/107 (8%)

Query: 342 EVATNNFSTDNKLGEGGFGEVYK----GVLPSGQE---IAVKRLSR-SSGQGGQEFKNEV 393
           E   NN      +G+G FG V++    G+LP  +    +AVK L   +S     +F+ E 
Sbjct: 1   EYPRNNIEYVRDIGQGAFGRVFQARAPGLLP-YEPFTMVAVKMLKEEASADMQADFQREA 59

Query: 394 VLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPKN 440
            L+A+  H N+V+LLG C  G+   L++E++    L+ FL  +SP+ 
Sbjct: 60  ALMAEFDHPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRA 106

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

 Score = 67.3 bits (164), Expect = 2e-12
 Identities = 33/92 (35%), Positives = 54/92 (58%), Gaps = 6/92 (6%)

Query: 353 KLGEGGFGEVY----KGVLPSGQE--IAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVR 406
           +LGEG FG+V+      +LP   +  +AVK L  +S    Q+F+ E  L+  LQH+++VR
Sbjct: 12  ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVR 71

Query: 407 LLGFCLEGEEKILVYEFVPNKSLDYFLYAQSP 438
             G C EG   ++V+E++ +  L+ FL +  P
Sbjct: 72  FYGVCTEGRPLLMVFEYMRHGDLNRFLRSHGP 103

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score = 66.7 bits (163), Expect = 2e-12
 Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 12/99 (12%)

Query: 354 LGEGGFGEVYKGV-LPSGQ----EIAVKRLSRSSG-QGGQEFKNEVVLVAKLQHRNLVRL 407
           LG G FG VYKGV +P G+     +A+K L   +  +  +E  +E  ++A + H ++VRL
Sbjct: 15  LGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRL 74

Query: 408 LGFCLEGEEKILVYEFVPNKSLDYFLYAQSPKNNNNWIG 446
           LG CL   +  L+ + +P   L  ++     +N+ + IG
Sbjct: 75  LGICL-SSQVQLITQLMPLGCLLDYV-----RNHKDNIG 107

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 65.8 bits (161), Expect = 3e-12
 Identities = 36/87 (41%), Positives = 49/87 (56%), Gaps = 6/87 (6%)

Query: 352 NKLGEGGFGEVYKGV--LPSGQEI--AVKRLSRSSGQGG-QEFKNEVVLVAKLQHRNLVR 406
            +LG G FG V KGV  + SG+E+  AVK L +     G +EF  E  ++A+L H  +VR
Sbjct: 1   KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVR 60

Query: 407 LLGFCLEGEEKILVYEFVPNKSLDYFL 433
           L+G C  GE  +LV E  P   L  +L
Sbjct: 61  LIGVCK-GEPLMLVMELAPLGPLLKYL 86

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 66.3 bits (162), Expect = 4e-12
 Identities = 28/99 (28%), Positives = 52/99 (52%), Gaps = 8/99 (8%)

Query: 352 NKLGEGGFGEVYKGVLP-----SGQEIAVKRLSRSSGQGGQ-EFKNEVVLVAKLQHRNLV 405
            +LGEG FG+V           +G+++AVK L+ S  +  + +F+ E+ ++  L H N+V
Sbjct: 10  KQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIV 69

Query: 406 RLLGFCLEGEEKI--LVYEFVPNKSLDYFLYAQSPKNNN 442
           +  G C +   +   L+ E++P+ SL  +L     + N 
Sbjct: 70  KYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRDQINL 108

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

 Score = 65.1 bits (158), Expect = 1e-11
 Identities = 34/102 (33%), Positives = 56/102 (54%), Gaps = 6/102 (5%)

Query: 343 VATNNFSTDNKLGEGGFGEVY----KGVLPSGQEI--AVKRLSRSSGQGGQEFKNEVVLV 396
           +  +N     +LGEG FG+V+      + P   +I  AVK L  +S    ++F  E  L+
Sbjct: 2   IKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELL 61

Query: 397 AKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSP 438
             LQH ++V+  G C+EG+  I+V+E++ +  L+ FL A  P
Sbjct: 62  TNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGP 103

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288

>gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

 Score = 64.8 bits (158), Expect = 1e-11
 Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 7/108 (6%)

Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRL-SRSSGQGGQEFKNEVV 394
           EV  ++ +    LG G FGEVY+G+           ++AVK L    S Q   +F  E +
Sbjct: 2   EVPRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEAL 61

Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPKNNN 442
           +++K  H+N+VRL+G   E   + ++ E +    L  FL    P+   
Sbjct: 62  IMSKFNHQNIVRLIGVSFERLPRFILLELMAGGDLKSFLRENRPRPER 109

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 63.8 bits (156), Expect = 2e-11
 Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 3/86 (3%)

Query: 347 NFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQ--EFKNEVVLVAKLQHRN 403
           N+   + +G G FG VYKG+ L +G  +A+K++S    +         E+ L+  L+H N
Sbjct: 1   NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPN 60

Query: 404 LVRLLGFCLEGEEKILVYEFVPNKSL 429
           +V+ +G     +   ++ E+  N SL
Sbjct: 61  IVKYIGSIETSDSLYIILEYAENGSL 86

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 63.6 bits (155), Expect = 2e-11
 Identities = 32/79 (40%), Positives = 45/79 (56%), Gaps = 3/79 (3%)

Query: 354 LGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLE 413
           +G+G FG+V  G    GQ++AVK L   S    Q F  E  ++  L+H NLV+LLG  L+
Sbjct: 14  IGKGEFGDVMLGDY-RGQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQ 71

Query: 414 GEEKILVYEFVPNKSL-DY 431
           G    +V E++   SL DY
Sbjct: 72  GNPLYIVTEYMAKGSLVDY 90

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 63.3 bits (155), Expect = 3e-11
 Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 5/87 (5%)

Query: 352 NKLGEGGFGEVYKGVLP-SGQEIAVK--RLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLL 408
             LG G FG VY  +   +G+ +AVK   LS  S +  +  + E+ +++ LQH N+VR  
Sbjct: 6   ELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYY 65

Query: 409 GFCLEGEEK-ILVY-EFVPNKSLDYFL 433
           G   + E+  + ++ E+V   SL   L
Sbjct: 66  GSERDEEKNTLNIFLEYVSGGSLSSLL 92

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 63.2 bits (154), Expect = 3e-11
 Identities = 29/86 (33%), Positives = 48/86 (55%)

Query: 348 FSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRL 407
           F+ + KLG G FGEV++G+  +   +A+K L        Q+F+ EV  + +L+H++L+ L
Sbjct: 8   FTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISL 67

Query: 408 LGFCLEGEEKILVYEFVPNKSLDYFL 433
              C  GE   ++ E +   SL  FL
Sbjct: 68  FAVCSVGEPVYIITELMEKGSLLAFL 93

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

 Score = 61.6 bits (150), Expect = 1e-10
 Identities = 30/93 (32%), Positives = 51/93 (54%), Gaps = 5/93 (5%)

Query: 346 NNFSTDNKLGEGGFGEVYKGVL--PSGQEI--AVKRL-SRSSGQGGQEFKNEVVLVAKLQ 400
           +  + +  +G G FGEV +G L  P  +EI  A+K L + SS +   +F  E  ++ +  
Sbjct: 4   SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFD 63

Query: 401 HRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL 433
           H N++RL G   +    +++ E++ N SLD FL
Sbjct: 64  HPNIIRLEGVVTKSRPVMIITEYMENGSLDKFL 96

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

 Score = 60.6 bits (147), Expect = 3e-10
 Identities = 37/104 (35%), Positives = 52/104 (50%), Gaps = 7/104 (6%)

Query: 347 NFSTDNKLGEGGFGEVY----KGVLPSGQE--IAVKRLSRSSGQGGQ-EFKNEVVLVAKL 399
           N      LG G FGEV+    KG+   G E  + VK L ++  +  Q EF+ E+ +  KL
Sbjct: 6   NLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKL 65

Query: 400 QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPKNNNN 443
            H+N+VRLLG C E E   ++ E+     L  FL A   K+   
Sbjct: 66  SHKNVVRLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKL 109

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 60.4 bits (147), Expect = 3e-10
 Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 1/92 (1%)

Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
           E+   +   + KLG G FGEV+ G      ++AVK L +      + F  E  ++ KL+H
Sbjct: 2   EIPRESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTL-KPGTMSPEAFLQEAQIMKKLRH 60

Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL 433
             LV+L   C E E   +V E++   SL  FL
Sbjct: 61  DKLVQLYAVCSEEEPIYIVTEYMSKGSLLDFL 92

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 59.6 bits (144), Expect = 5e-10
 Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 1/84 (1%)

Query: 353 KLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCL 412
           ++G G FG V+ G     +++A+K + R      ++F  E  ++ KL H  LV+L G C 
Sbjct: 11  EIGSGQFGLVWLGYWLEKRKVAIKTI-REGAMSEEDFIEEAQVMMKLSHPKLVQLYGVCT 69

Query: 413 EGEEKILVYEFVPNKSLDYFLYAQ 436
           E     LV+EF+ +  L  +L AQ
Sbjct: 70  ERSPICLVFEFMEHGCLSDYLRAQ 93

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

 Score = 59.2 bits (143), Expect = 9e-10
 Identities = 30/92 (32%), Positives = 53/92 (57%), Gaps = 6/92 (6%)

Query: 353 KLGEGGFGEVY----KGVLPSGQE--IAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVR 406
           +LGEG FG+V+      + P+  +  +AVK L   +    ++F+ E  L+  LQH ++V+
Sbjct: 12  ELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVK 71

Query: 407 LLGFCLEGEEKILVYEFVPNKSLDYFLYAQSP 438
             G C +G+  I+V+E++ +  L+ FL A  P
Sbjct: 72  FYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGP 103

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score = 57.6 bits (139), Expect = 2e-09
 Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 8/88 (9%)

Query: 354 LGEGGFGEVYKG----VLPSG---QEIAVKRLSR-SSGQGGQEFKNEVVLVAKLQHRNLV 405
           LG G FGEVY+G    +L  G     +AVK L + ++ Q  +EF  E  L++   H N+V
Sbjct: 3   LGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIV 62

Query: 406 RLLGFCLEGEEKILVYEFVPNKSLDYFL 433
           +LLG CL  E + ++ E +    L  +L
Sbjct: 63  KLLGVCLLNEPQYIIMELMEGGDLLSYL 90

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 57.5 bits (139), Expect = 2e-09
 Identities = 32/83 (38%), Positives = 49/83 (59%), Gaps = 3/83 (3%)

Query: 353 KLGEGGFGEVYKGVLPSGQEIAVK--RLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGF 410
           K+G+G FG+VYKGVL    E+AVK  R +       ++F  E  ++ +  H N+V+L+G 
Sbjct: 2   KIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDL-KRKFLQEAEILKQYDHPNIVKLIGV 60

Query: 411 CLEGEEKILVYEFVPNKSLDYFL 433
           C++ +   +V E VP  SL  FL
Sbjct: 61  CVQKQPIYIVMELVPGGSLLTFL 83

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

 Score = 57.3 bits (138), Expect = 4e-09
 Identities = 34/105 (32%), Positives = 57/105 (54%), Gaps = 7/105 (6%)

Query: 353 KLGEGGFGEVYKGVL------PSGQEIAVKRLS-RSSGQGGQEFKNEVVLVAKLQHRNLV 405
           +LGE  FG+VYKG L         Q +A+K L  ++ G   +EFK+E ++ ++LQH N+V
Sbjct: 12  ELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIV 71

Query: 406 RLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPKNNNNWIGQDAT 450
            LLG   + +   +++ +  +  L  FL  +SP ++      D T
Sbjct: 72  CLLGVVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKT 116

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 56.8 bits (137), Expect = 4e-09
 Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 2/93 (2%)

Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQ 400
           E+   + +  +KLG G +GEVY+GV       +AVK L +      +EF  E  ++ +++
Sbjct: 2   EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIK 60

Query: 401 HRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL 433
           H NLV+LLG C       ++ EF+   +L  +L
Sbjct: 61  HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 93

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 56.8 bits (138), Expect = 4e-09
 Identities = 30/84 (35%), Positives = 49/84 (58%), Gaps = 1/84 (1%)

Query: 348 FSTDNKLGEGGFGEVYKG-VLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVR 406
           F    K+G+GGFGEVYK     +G+E+A+K +   S +  ++  NE+ ++ K +H N+V+
Sbjct: 2   FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVK 61

Query: 407 LLGFCLEGEEKILVYEFVPNKSLD 430
             G  L+ +E  +V EF    SL 
Sbjct: 62  YYGSYLKKDELWIVMEFCSGGSLK 85

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4

 Score = 57.4 bits (138), Expect = 4e-09
 Identities = 35/94 (37%), Positives = 55/94 (58%), Gaps = 9/94 (9%)

Query: 354 LGEGGFGEVYKGV-LPSGQEI----AVKRLSRSSG-QGGQEFKNEVVLVAKLQHRNLVRL 407
           LG G FG VYKG+ +P G+ +    A+K L+ ++G +   EF +E +++A + H +LVRL
Sbjct: 15  LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 74

Query: 408 LGFCLEGEEKILVYEFVPNKSLDYFLYAQSPKNN 441
           LG CL    + LV + +P+  L    Y    K+N
Sbjct: 75  LGVCLSPTIQ-LVTQLMPHGCL--LDYVHEHKDN 105

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303

>gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

 Score = 56.9 bits (137), Expect = 4e-09
 Identities = 33/95 (34%), Positives = 54/95 (56%), Gaps = 6/95 (6%)

Query: 353 KLGEGGFGEVYKG--VLPS---GQEIAVKRLSR-SSGQGGQEFKNEVVLVAKLQHRNLVR 406
           +LGE  FG++YKG   LP     Q +A+K L   ++ Q   EF+ E  L+A+L H N+V 
Sbjct: 12  ELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVC 71

Query: 407 LLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPKNN 441
           LLG   + +   +++E++    L  FL  +SP ++
Sbjct: 72  LLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSD 106

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 56.3 bits (136), Expect = 6e-09
 Identities = 35/82 (42%), Positives = 46/82 (56%), Gaps = 6/82 (7%)

Query: 354 LGEGGFGEVYKGV-LPSGQEIAVKRLS-RSSGQGGQE----FKNEVVLVAKLQHRNLVRL 407
           LG G FG VY+G+ L  G   AVK +S    GQ GQE     + E+ L++KLQH N+V+ 
Sbjct: 8   LGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQY 67

Query: 408 LGFCLEGEEKILVYEFVPNKSL 429
           LG   E +   +  E VP  SL
Sbjct: 68  LGTEREEDNLYIFLELVPGGSL 89

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 54.5 bits (131), Expect = 3e-08
 Identities = 37/101 (36%), Positives = 51/101 (50%), Gaps = 18/101 (17%)

Query: 354 LGEGGFGEV----YKGVLP----SGQEIAVKRLSRSSGQGGQE-FKNEVVLVAKLQHRNL 404
           LGEG FG+V    Y    P    +G+ +AVK L R  GQ     +K E+ ++  L H N+
Sbjct: 12  LGEGHFGKVSLYCYD---PANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENI 68

Query: 405 VRLLGFCLEGEEKI--LVYEFVPNKSLDYFLYAQSPKNNNN 443
           V+  G C E   K   L+ E+VP  SL  +L    PK+  N
Sbjct: 69  VKYKGCCSEQGGKGLQLIMEYVPLGSLRDYL----PKHKLN 105

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 54.1 bits (130), Expect = 3e-08
 Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 6/84 (7%)

Query: 352 NKLGEGGFGEVYKGVLPSGQEIAVKRLS------RSSGQGGQEFKNEVVLVAKLQHRNLV 405
             LG+G +G VY G+   GQ IAVK++        ++ +  ++ + EV L+  L+H N+V
Sbjct: 6   EVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIV 65

Query: 406 RLLGFCLEGEEKILVYEFVPNKSL 429
           + LG CL+     +  EFVP  S+
Sbjct: 66  QYLGTCLDDNTISIFMEFVPGGSI 89

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|133209 cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 53.7 bits (129), Expect = 5e-08
 Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 8/99 (8%)

Query: 354 LGEGGFGEVYKG----VLPSGQ----EIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLV 405
           LG+G F +++KG    V   G+    E+ +K L +S     + F     ++++L H++LV
Sbjct: 3   LGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLV 62

Query: 406 RLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPKNNNNW 444
              G C+ G+E I+V E+V   SLD +L       N +W
Sbjct: 63  LNYGVCVCGDESIMVQEYVKFGSLDTYLKKNKNLINISW 101

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 258

>gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

 Score = 53.1 bits (127), Expect = 8e-08
 Identities = 27/97 (27%), Positives = 55/97 (56%), Gaps = 5/97 (5%)

Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVL--PSGQEIAVKRLSRSSG---QGGQEFKNEVVLV 396
           E+  ++ +    +G G FGEV++G+L  P  +E+AV   +   G   +  Q+F +E  ++
Sbjct: 1   EIHPSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIM 60

Query: 397 AKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL 433
            +  H N++RL G   + +  +++ E++ N +LD +L
Sbjct: 61  GQFSHHNIIRLEGVVTKFKPAMIITEYMENGALDKYL 97

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 52.7 bits (127), Expect = 9e-08
 Identities = 30/109 (27%), Positives = 57/109 (52%), Gaps = 7/109 (6%)

Query: 342 EVATNNFSTDNKLGEGGFGEVYKGV---LPSGQ---EIAVKRLS-RSSGQGGQEFKNEVV 394
           E+     +   +LG+G FG VY+G+   +  G+    +A+K ++  +S +   EF NE  
Sbjct: 2   ELPREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEAS 61

Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPKNNNN 443
           ++ +    ++VRLLG    G+  ++V E +    L  +L ++ P+  NN
Sbjct: 62  VMKEFNCHHVVRLLGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENN 110

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 52.5 bits (126), Expect = 1e-07
 Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 1/92 (1%)

Query: 354 LGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLE 413
           LG G FG V+ G      ++A+K + R       +F  E  ++ KL H NLV+L G C +
Sbjct: 12  LGSGQFGVVHLGKWRGKIDVAIKMI-REGAMSEDDFIEEAKVMMKLSHPNLVQLYGVCTK 70

Query: 414 GEEKILVYEFVPNKSLDYFLYAQSPKNNNNWI 445
                +V E++ N  L  +L  +  K    W+
Sbjct: 71  QRPIFIVTEYMANGCLLNYLRERKGKLGTEWL 102

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

 Score = 52.3 bits (126), Expect = 1e-07
 Identities = 29/113 (25%), Positives = 47/113 (41%), Gaps = 18/113 (15%)

Query: 353 KLGEGGFGEVY------------KGVLPSGQE-----IAVKRLSRSSGQGG-QEFKNEVV 394
           KLGEG FGEV+            K    +        +AVK L   +     ++F  EV 
Sbjct: 12  KLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVK 71

Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPKNNNNWIGQ 447
           ++++L   N+ RLLG C       ++ E++ N  L+ FL     + +      
Sbjct: 72  ILSRLSDPNIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNS 124

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296

>gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases

 Score = 51.7 bits (124), Expect = 3e-07
 Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 12/94 (12%)

Query: 354 LGEGGFGEVYKGVL----PSGQEIAVK--RLSRSSGQGGQEFKNEVVLVAKLQHRNLVRL 407
           LGEG FG V +G L     S  ++AVK  +L   +    +EF +E   +    H N+++L
Sbjct: 7   LGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKL 66

Query: 408 LGFCLEGEEK------ILVYEFVPNKSLDYFLYA 435
           +G C E          +++  F+ +  L  FL  
Sbjct: 67  IGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLY 100

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 52.1 bits (123), Expect = 3e-07
 Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 6/91 (6%)

Query: 347 NFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSR---SSGQGGQEFKNEVVLVAKLQH-R 402
           ++    KLGEG FGEVY       + +A+K L++   S  +  + F  E+ ++A L H  
Sbjct: 1   SYRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPP 58

Query: 403 NLVRLLGFCLEGEEKILVYEFVPNKSLDYFL 433
           N+V+L  F  +     LV E+V   SL+  L
Sbjct: 59  NIVKLYDFFQDEGSLYLVMEYVDGGSLEDLL 89

Length = 384

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 51.0 bits (122), Expect = 4e-07
 Identities = 33/93 (35%), Positives = 48/93 (51%), Gaps = 4/93 (4%)

Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
           EV         KLG G FGEV+ G      ++A+K L + S    + F  E  L+ +LQH
Sbjct: 2   EVPRETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGS-MSPEAFLAEANLMKQLQH 60

Query: 402 RNLVRLLGFCLEGEEKI-LVYEFVPNKSLDYFL 433
             LVRL  + +  +E I ++ E++ N SL  FL
Sbjct: 61  PRLVRL--YAVVTQEPIYIITEYMENGSLVDFL 91

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 50.9 bits (122), Expect = 4e-07
 Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 1/81 (1%)

Query: 353 KLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCL 412
           KLG G FGEV++G+  +   +AVK L   +    ++F  E  ++ KL+H  L++L   C 
Sbjct: 13  KLGAGQFGEVWEGLWNNTTPVAVKTLKPGTMD-PKDFLAEAQIMKKLRHPKLIQLYAVCT 71

Query: 413 EGEEKILVYEFVPNKSLDYFL 433
             E   +V E +   SL  +L
Sbjct: 72  LEEPIYIVTELMKYGSLLEYL 92

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 51.0 bits (122), Expect = 4e-07
 Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 1/81 (1%)

Query: 354 LGEGGFGEVYKGVLPSGQ-EIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCL 412
           LG+G +G VY     S Q  IA+K +     +  Q    E+ L + L+HRN+V+ LG   
Sbjct: 16  LGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDS 75

Query: 413 EGEEKILVYEFVPNKSLDYFL 433
           E     +  E VP  SL   L
Sbjct: 76  ENGFFKIFMEQVPGGSLSALL 96

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 50.5 bits (121), Expect = 6e-07
 Identities = 29/82 (35%), Positives = 37/82 (45%), Gaps = 6/82 (7%)

Query: 353 KLGEGGFGEVYKG--VLPSGQEI--AVKRLSRSSGQGG-QEFKNEVVLVAKLQHRNLVRL 407
           KLG+G FG V +G      G+ I  AVK L          +F  E  ++  L H NL+RL
Sbjct: 2   KLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRL 61

Query: 408 LGFCLEGEEKILVYEFVPNKSL 429
            G  L      +V E  P  SL
Sbjct: 62  YGVVLTHPLM-MVTELAPLGSL 82

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

 Score = 50.7 bits (121), Expect = 6e-07
 Identities = 31/122 (25%), Positives = 54/122 (44%), Gaps = 21/122 (17%)

Query: 342 EVATNNFSTDNKLGEGGFGEV----------YKGVLPSGQE-----IAVKRL-SRSSGQG 385
           E          KLGEG FGEV          + G      +     +AVK L +  +   
Sbjct: 1   EFPRQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTA 60

Query: 386 GQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL-----YAQSPKN 440
             +F  E+ ++++L++ N++RLLG C+  +   ++ E++ N  L+ FL      +     
Sbjct: 61  RNDFLKEIKIMSRLKNPNIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHA 120

Query: 441 NN 442
           NN
Sbjct: 121 NN 122

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 50.0 bits (119), Expect = 7e-07
 Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 1/81 (1%)

Query: 354 LGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQ-EFKNEVVLVAKLQHRNLVRLLGFCL 412
           LG+G FGEV+KG L     +AVK       Q  + +F +E  ++ +  H N+V+L+G C 
Sbjct: 3   LGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCT 62

Query: 413 EGEEKILVYEFVPNKSLDYFL 433
           + +   +V E VP      FL
Sbjct: 63  QRQPIYIVMELVPGGDFLSFL 83

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 50.0 bits (119), Expect = 7e-07
 Identities = 32/81 (39%), Positives = 43/81 (53%), Gaps = 4/81 (4%)

Query: 353 KLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCL 412
            +GEG FG V +G   +GQ++AVK +        Q F  E  ++ KL H+NLVRLLG  L
Sbjct: 13  IIGEGEFGAVLQGEY-TGQKVAVKNIK--CDVTAQAFLEETAVMTKLHHKNLVRLLGVIL 69

Query: 413 EGEEKILVYEFVPNKSLDYFL 433
                I V E +   +L  FL
Sbjct: 70  HNGLYI-VMELMSKGNLVNFL 89

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 50.3 bits (121), Expect = 7e-07
 Identities = 25/72 (34%), Positives = 42/72 (58%), Gaps = 2/72 (2%)

Query: 353 KLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFC 411
           K+GEG  GEVYK     +G+E+A+K++ R   Q  +   NE++++   +H N+V      
Sbjct: 26  KIGEGASGEVYKATDRATGKEVAIKKM-RLRKQNKELIINEILIMKDCKHPNIVDYYDSY 84

Query: 412 LEGEEKILVYEF 423
           L G+E  +V E+
Sbjct: 85  LVGDELWVVMEY 96

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|133195 cd05064, PTKc_EphR_A10, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

 Score = 49.9 bits (119), Expect = 8e-07
 Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 7/86 (8%)

Query: 354 LGEGGFGEVYKGVL--PSGQE--IAVKRLSRSSGQGGQE--FKNEVVLVAKLQHRNLVRL 407
           LG G FGE+ +G L  PS +E  +A+  L R+     Q   F  E + + +  H N+VRL
Sbjct: 13  LGTGRFGELCRGCLKLPSKRELPVAIHTL-RAGCSDKQRRGFLAEALTLGQFDHSNIVRL 71

Query: 408 LGFCLEGEEKILVYEFVPNKSLDYFL 433
            G    G   ++V E++ N +LD FL
Sbjct: 72  EGVITRGNTMMIVTEYMSNGALDSFL 97

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 50.0 bits (119), Expect = 8e-07
 Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 1/96 (1%)

Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
           E+   +     KLG G FGEV+ G   +  ++AVK L   +    Q F  E  L+  LQH
Sbjct: 2   EIPRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQH 60

Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQS 437
             LVRL     + E   ++ E++   SL  FL +  
Sbjct: 61  DKLVRLYAVVTKEEPIYIITEYMAKGSLLDFLKSDE 96

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score = 50.1 bits (120), Expect = 9e-07
 Identities = 29/91 (31%), Positives = 47/91 (51%), Gaps = 13/91 (14%)

Query: 337 DFETIEVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGG--QEFKNEV 393
           D+  IE          K+GEG +G VYKG    +GQ +A+K++   S + G       E+
Sbjct: 1   DYTKIE----------KIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREI 50

Query: 394 VLVAKLQHRNLVRLLGFCLEGEEKILVYEFV 424
            L+ +LQH N+V L    ++     L++EF+
Sbjct: 51  SLLKELQHPNIVCLQDVLMQESRLYLIFEFL 81

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

 Score = 49.6 bits (118), Expect = 1e-06
 Identities = 32/109 (29%), Positives = 57/109 (52%), Gaps = 7/109 (6%)

Query: 342 EVATNNFSTDNKLGEGGFGEVY----KGVLPSGQE--IAVKRLSRSSGQGGQ-EFKNEVV 394
           EVA    +   +LG+G FG VY    KGV+    E  +A+K ++ ++    + EF NE  
Sbjct: 2   EVAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 61

Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPKNNNN 443
           ++ +    ++VRLLG   +G+  +++ E +    L  +L +  P+  NN
Sbjct: 62  VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENN 110

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277

>gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

 Score = 50.0 bits (119), Expect = 1e-06
 Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 8/91 (8%)

Query: 348 FSTDNKLGEGGFGEVYKGV-LPSGQEI----AVKRLSR-SSGQGGQEFKNEVVLVAKLQH 401
           F     LG G FG VYKG+ +P G+++    A+K L   +S +  +E  +E  ++A + +
Sbjct: 9   FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 68

Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKS-LDY 431
            ++ RLLG CL    + L+ + +P    LDY
Sbjct: 69  PHVCRLLGICLTSTVQ-LITQLMPFGCLLDY 98

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 49.3 bits (118), Expect = 2e-06
 Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 6/98 (6%)

Query: 341 IEVATNNFSTDNKLGEGGFGEVYKGV--LPSGQEI--AVKRLSR-SSGQGGQEFKNEVVL 395
            E+   + +    +GEG FG+VY+GV   P  ++I  AVK     +S    ++F  E  +
Sbjct: 1   YEIQREDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYI 60

Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL 433
           + +  H ++V+L+G   E     +V E  P   L  +L
Sbjct: 61  MRQFDHPHIVKLIGVITE-NPVWIVMELAPLGELRSYL 97

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|173627 cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 49.0 bits (117), Expect = 2e-06
 Identities = 35/98 (35%), Positives = 51/98 (52%), Gaps = 13/98 (13%)

Query: 354 LGEGGFGEVYKGVL---------PSGQEIAVKR-LSRSSGQGGQEFKNEVVLVAKLQHRN 403
           LG+G F  +YKGVL           GQE++V   +  S  +    F     L+++L H++
Sbjct: 3   LGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSHKH 62

Query: 404 LVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPKNN 441
           LV+L G C+  +E I+V E+V    LD FL     KNN
Sbjct: 63  LVKLYGVCVR-DENIMVEEYVKFGPLDVFL--HREKNN 97

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 259

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 48.3 bits (115), Expect = 2e-06
 Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 8/104 (7%)

Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKR-----LSRSSGQGGQEFKNEVVLVAKL 399
            N+     LG+G FG VY    + +G+E+AVK+      S  + +     + E+ L+  L
Sbjct: 2   TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNL 61

Query: 400 QHRNLVRLLGFCLEGEEKILVY-EFVPNKSLDYFLYAQSPKNNN 442
           QH  +V+  G CL  +E + ++ E++P  S+   L A       
Sbjct: 62  QHERIVQYYG-CLRDDETLSIFMEYMPGGSVKDQLKAYGALTET 104

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

 Score = 47.7 bits (113), Expect = 5e-06
 Identities = 32/109 (29%), Positives = 57/109 (52%), Gaps = 7/109 (6%)

Query: 342 EVATNNFSTDNKLGEGGFGEVYKGV---LPSGQ---EIAVKRLSRSSGQGGQ-EFKNEVV 394
           EV+    +   +LG+G FG VY+G    +  G+    +AVK ++ S+    + EF NE  
Sbjct: 2   EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 61

Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPKNNNN 443
           ++      ++VRLLG   +G+  ++V E + +  L  +L +  P+  NN
Sbjct: 62  VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENN 110

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 48.1 bits (115), Expect = 5e-06
 Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 7/70 (10%)

Query: 344 ATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFK----NEVVLVAK 398
              ++    KLGEG FGEVYK   + +G+ +A+K++   + + G  F      E+ ++ K
Sbjct: 6   KLRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDG--FPITALREIKILKK 63

Query: 399 LQHRNLVRLL 408
           L+H N+V L+
Sbjct: 64  LKHPNVVPLI 73

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 47.7 bits (113), Expect = 5e-06
 Identities = 30/112 (26%), Positives = 52/112 (46%), Gaps = 8/112 (7%)

Query: 347 NFSTDNKLGEGGFGEVYKGV------LPSGQEIAVKRLSRSSGQGG-QEFKNEVVLVAKL 399
           N      LGEG FG+V K              +AVK L  ++     ++  +E  L+ ++
Sbjct: 1   NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQV 60

Query: 400 QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPKNNNNWIGQDATR 451
            H ++++L G C +    +L+ E+    SL  FL  +S K   +++G D  R
Sbjct: 61  NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRSFL-RESRKVGPSYLGSDGNR 111

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 47.6 bits (113), Expect = 6e-06
 Identities = 35/100 (35%), Positives = 51/100 (51%), Gaps = 18/100 (18%)

Query: 354 LGEGGFGEV----YKGVLP----SGQEIAVKRLS-RSSGQGGQEFKNEVVLVAKLQHRNL 404
           LGEG FG+V    Y    P    +G+++AVK L   S G    + K E+ ++  L H N+
Sbjct: 12  LGEGHFGKVELCRYD---PEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENI 68

Query: 405 VRLLGFCLEGEEK--ILVYEFVPNKSLDYFLYAQSPKNNN 442
           V+  G C E       L+ EF+P+ SL  +L    P+N N
Sbjct: 69  VKYKGICTEDGGNGIKLIMEFLPSGSLKEYL----PRNKN 104

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284

>gnl|CDD|173656 cd05111, PTK_HER3, Pseudokinase domain of the Protein Tyrosine Kinase, HER3

 Score = 47.3 bits (112), Expect = 7e-06
 Identities = 32/82 (39%), Positives = 43/82 (52%), Gaps = 7/82 (8%)

Query: 354 LGEGGFGEVYKGV-LPSGQEI----AVKRL-SRSSGQGGQEFKNEVVLVAKLQHRNLVRL 407
           LG G FG V+KG+ +P G  I    A+K +  RS  Q  QE  + ++ +  L H  +VRL
Sbjct: 15  LGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRL 74

Query: 408 LGFCLEGEEKILVYEFVPNKSL 429
           LG C  G    LV +  P  SL
Sbjct: 75  LGIC-PGASLQLVTQLSPLGSL 95

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 binds the neuregulin ligands, NRG1 and NRG2. HER3 contains an impaired tyr kinase domain and relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. Length = 279

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 47.3 bits (113), Expect = 7e-06
 Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 3/76 (3%)

Query: 353 KLGEGGFGEVYK-GVLPSGQEIAVKR--LSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLG 409
           ++GEG  G V+K     +G+ +A+K+  L R  G    +   E+  +   QH  +V+LL 
Sbjct: 7   RIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLD 66

Query: 410 FCLEGEEKILVYEFVP 425
               G   +LV E++P
Sbjct: 67  VFPHGSGFVLVMEYMP 82

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 47.0 bits (111), Expect = 7e-06
 Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 4/99 (4%)

Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
           E+   +   + KLG+G FGEV+ G       +A+K L +      + F  E  ++ KL+H
Sbjct: 2   EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 60

Query: 402 RNLVRLLGFCLEGEEKI-LVYEFVPNKSLDYFLYAQSPK 439
             LV+L  + +  EE I +V E++   SL  FL  +  K
Sbjct: 61  EKLVQL--YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGK 97

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

 Score = 47.2 bits (112), Expect = 7e-06
 Identities = 31/119 (26%), Positives = 59/119 (49%), Gaps = 22/119 (18%)

Query: 353 KLGEGGFGEVYKGVLPSGQE-----------------IAVKRLSRSSGQGGQ-EFKNEVV 394
           KLGEG FGEV+   + + Q+                 +AVK L   + +  + +F  EV 
Sbjct: 12  KLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVK 71

Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQ----SPKNNNNWIGQDA 449
           ++++L+  N++RLLG C++ +   ++ E++ N  L+ FL +       +N N+ +    
Sbjct: 72  ILSRLKDPNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAH 130

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304

>gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

 Score = 46.8 bits (111), Expect = 8e-06
 Identities = 28/85 (32%), Positives = 48/85 (56%), Gaps = 5/85 (5%)

Query: 354 LGEGGFGEVYKGVL--PSGQEI--AVKRL-SRSSGQGGQEFKNEVVLVAKLQHRNLVRLL 408
           +G G FGEV +G L  P  +EI  A+K L S  + +  ++F +E  ++ +  H N++ L 
Sbjct: 12  IGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLE 71

Query: 409 GFCLEGEEKILVYEFVPNKSLDYFL 433
           G   +    +++ EF+ N +LD FL
Sbjct: 72  GVVTKSRPVMIITEFMENGALDSFL 96

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269

>gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

 Score = 46.8 bits (111), Expect = 9e-06
 Identities = 27/93 (29%), Positives = 48/93 (51%), Gaps = 5/93 (5%)

Query: 346 NNFSTDNKLGEGGFGEVYKGVL--PSGQEIAVKRLSRSSG---QGGQEFKNEVVLVAKLQ 400
           +    +  +G G FGEV  G L  P  +EI V   +  +G   +  ++F +E  ++ +  
Sbjct: 4   SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFD 63

Query: 401 HRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL 433
           H N++ L G   + +  ++V E++ N SLD FL
Sbjct: 64  HPNIIHLEGVVTKSKPVMIVTEYMENGSLDAFL 96

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267

>gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

 Score = 46.8 bits (111), Expect = 1e-05
 Identities = 30/106 (28%), Positives = 55/106 (51%), Gaps = 18/106 (16%)

Query: 353 KLGEGGFGEVY----KGVL----------PSGQE---IAVKRLSRSSGQGGQ-EFKNEVV 394
           KLGEG FGEV+    +G+            SG +   +AVK L   + +  + +F  E+ 
Sbjct: 12  KLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIK 71

Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPKN 440
           ++++L+  N++RLL  C+  +   ++ E++ N  L+ FL    P+ 
Sbjct: 72  IMSRLKDPNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQE 117

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 46.7 bits (111), Expect = 1e-05
 Identities = 31/86 (36%), Positives = 50/86 (58%), Gaps = 8/86 (9%)

Query: 354 LGEGGFGEV----YKGVLPS-GQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLL 408
           LG+G FG V    Y  +  + G+ +AVK+L  S+ +  ++F+ E+ ++  LQH N+V+  
Sbjct: 12  LGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYK 71

Query: 409 GFCLE-GEEKI-LVYEFVPNKSL-DY 431
           G C   G   + LV E++P  SL DY
Sbjct: 72  GVCYSAGRRNLRLVMEYLPYGSLRDY 97

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|173646 cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

 Score = 46.5 bits (110), Expect = 1e-05
 Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 4/88 (4%)

Query: 353 KLGEGGFGEVYKGVLPSG---QEIAVKRLSRSSG-QGGQEFKNEVVLVAKLQHRNLVRLL 408
           ++G G FG+V  G + SG    ++ VK L  S+  Q   +F  E      LQH NL++ L
Sbjct: 2   EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCL 61

Query: 409 GFCLEGEEKILVYEFVPNKSLDYFLYAQ 436
           G C E    +LV EF P   L  +L + 
Sbjct: 62  GQCTEVTPYLLVMEFCPLGDLKGYLRSC 89

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells. Aatyk1 has been implicated in neural differentiation, and is a regulator of the Na-K-2Cl cotransporter, a membrane protein involved in cell proliferation and survival, epithelial transport, and blood pressure control. The function of Aatyk3 is still unknown. Length = 269

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 46.3 bits (110), Expect = 1e-05
 Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 4/85 (4%)

Query: 345 TNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLS---RSSGQGGQEFKNEVVLVAKLQ 400
             NF  + K+G+G F  VYK + L  G+ +A+K++        +  Q+   E+ L+ +L 
Sbjct: 1   LGNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLD 60

Query: 401 HRNLVRLLGFCLEGEEKILVYEFVP 425
           H N+++ L   +E  E  +V E   
Sbjct: 61  HPNVIKYLASFIENNELNIVLELAD 85

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 46.1 bits (109), Expect = 2e-05
 Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 4/93 (4%)

Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
           E+   +     KLG G FGEV+ G      ++AVK L +      + F  E  ++ KL+H
Sbjct: 2   EIPRESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTL-KPGTMSPESFLEEAQIMKKLRH 60

Query: 402 RNLVRLLGFCLEGEEKI-LVYEFVPNKSLDYFL 433
             LV+L  + +  EE I +V E++   SL  FL
Sbjct: 61  DKLVQL--YAVVSEEPIYIVTEYMSKGSLLDFL 91

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 46.1 bits (109), Expect = 2e-05
 Identities = 24/78 (30%), Positives = 46/78 (58%), Gaps = 1/78 (1%)

Query: 353 KLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFC 411
           K+G+G  G VY  + + +GQE+A+K+++       +   NE++++ + +H N+V  L   
Sbjct: 26  KIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSY 85

Query: 412 LEGEEKILVYEFVPNKSL 429
           L G+E  +V E++   SL
Sbjct: 86  LVGDELWVVMEYLAGGSL 103

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 45.8 bits (109), Expect = 2e-05
 Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 3/85 (3%)

Query: 352 NKLGEGGFGEVYKGV-LPSGQEIAVK--RLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLL 408
           NK+G G FG+VY  V L +G+ +AVK  R+  +  +  +E  +E+ ++  L+H NLV+  
Sbjct: 6   NKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYY 65

Query: 409 GFCLEGEEKILVYEFVPNKSLDYFL 433
           G  +  E+  +  E+    +L+  L
Sbjct: 66  GVEVHREKVYIFMEYCSGGTLEELL 90

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 46.2 bits (110), Expect = 2e-05
 Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 3/74 (4%)

Query: 353 KLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKN--EVVLVAKLQHRNLVRLLG 409
           K+GEG +G VYK     +G+ +A+K++       G       E+ L+ +L H N+++LL 
Sbjct: 6   KIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLD 65

Query: 410 FCLEGEEKILVYEF 423
                 +  LV+EF
Sbjct: 66  VFRHKGDLYLVFEF 79

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|133174 cd05042, PTKc_Aatyk, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

 Score = 46.0 bits (109), Expect = 2e-05
 Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 4/86 (4%)

Query: 352 NKLGEGGFGEVYKGVLPSGQEIA---VKRLSRSSGQGGQ-EFKNEVVLVAKLQHRNLVRL 407
           +++G G FG+V  G    G   A   VK L  S+    Q  F  EV    +L H N+++ 
Sbjct: 1   DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQC 60

Query: 408 LGFCLEGEEKILVYEFVPNKSLDYFL 433
           LG C+E    +LV EF P   L  +L
Sbjct: 61  LGQCIESIPYLLVLEFCPLGDLKNYL 86

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kinases based on overall sequence similarity and the phylogenetic tree. However, analysis of catalytic residues suggests that Aatyk proteins may be multispecific kinases, functioning also as serine/threonine kinases. They are involved in neural differentiation, nerve growth factor (NGF) signaling, apoptosis, and spermatogenesis. Length = 269

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 45.4 bits (108), Expect = 3e-05
 Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 7/91 (7%)

Query: 346 NNFSTDNKLGEGGFGEVYKG-VLPSGQEIAVKRLSRSSGQGGQEFKN----EVVLVAKLQ 400
           N +     +GEG +G V K     +G+ +A+K+   S  +  ++ K     EV ++ +L+
Sbjct: 1   NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKES--EDDEDVKKTALREVKVLRQLR 58

Query: 401 HRNLVRLLGFCLEGEEKILVYEFVPNKSLDY 431
           H N+V L           LV+E+V    L+ 
Sbjct: 59  HENIVNLKEAFRRKGRLYLVFEYVERTLLEL 89

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 45.2 bits (108), Expect = 3e-05
 Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 9/83 (10%)

Query: 348 FSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFK----NEVVLVAKLQHR 402
           +    KLGEG +G VYK     +G+ +A+K++   + + G         E+ L+ +L+H 
Sbjct: 1   YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEG--IPSTALREISLLKELKHP 58

Query: 403 NLVRLLGFCLEGEEKI-LVYEFV 424
           N+V+LL      E K+ LV+E+ 
Sbjct: 59  NIVKLLDVIH-TERKLYLVFEYC 80

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 44.7 bits (106), Expect = 4e-05
 Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 1/84 (1%)

Query: 347 NFSTDNKLGEGGFGEVYKG-VLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLV 405
                 K+GEG  G V       +G+++AVK++     Q  +   NEVV++   QH N+V
Sbjct: 20  YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIV 79

Query: 406 RLLGFCLEGEEKILVYEFVPNKSL 429
            +    L G+E  +V EF+   +L
Sbjct: 80  EMYSSYLVGDELWVVMEFLEGGAL 103

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

 Score = 44.3 bits (105), Expect = 7e-05
 Identities = 28/112 (25%), Positives = 51/112 (45%), Gaps = 18/112 (16%)

Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRLSRSSGQGGQEFKNEVVL 395
           E+  +  +    LGEG FG+V K              +AVK L   + +  ++  +   L
Sbjct: 8   ELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATE--KDLSD---L 62

Query: 396 VAKL-------QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPKN 440
           V+++       +H+N++ LLG C +     +V E+  + +L  FL A+ P  
Sbjct: 63  VSEMEMMKMIGKHKNIINLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPG 114

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score = 43.9 bits (103), Expect = 7e-05
 Identities = 32/93 (34%), Positives = 48/93 (51%), Gaps = 4/93 (4%)

Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
           E+   +   D KLG+G FGEV+ G      ++A+K L +      + F  E  ++ KL+H
Sbjct: 2   EIPRESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTL-KPGTMMPEAFLQEAQIMKKLRH 60

Query: 402 RNLVRLLGFCLEGEEKI-LVYEFVPNKSLDYFL 433
             LV L  + +  EE I +V EF+   SL  FL
Sbjct: 61  DKLVPL--YAVVSEEPIYIVTEFMGKGSLLDFL 91

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 43.7 bits (103), Expect = 8e-05
 Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 10/90 (11%)

Query: 354 LGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQE---------FKNEVVLVAKLQHRN 403
           +G G FG VY G+   SG+ +AVK++   S     +            E+ L+ +LQH N
Sbjct: 8   IGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHEN 67

Query: 404 LVRLLGFCLEGEEKILVYEFVPNKSLDYFL 433
           +V+ LG  L+ +   +  E+VP  S+   L
Sbjct: 68  IVQYLGSSLDADHLNIFLEYVPGGSVAALL 97

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

 Score = 43.7 bits (103), Expect = 1e-04
 Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 1/81 (1%)

Query: 353 KLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCL 412
           +LG G FG V+ G   +  ++A+K +        ++F  E  ++ KL H  LV+L G C 
Sbjct: 11  ELGSGQFGVVHLGKWRAQIKVAIKAI-NEGAMSEEDFIEEAKVMMKLSHPKLVQLYGVCT 69

Query: 413 EGEEKILVYEFVPNKSLDYFL 433
           + +   +V EF+ N  L  +L
Sbjct: 70  QQKPLYIVTEFMENGCLLNYL 90

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256

>gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

 Score = 43.6 bits (103), Expect = 1e-04
 Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 8/94 (8%)

Query: 354 LGEGGFGEVYKGVL--PSGQEI--AVKRLSR-SSGQGGQEFKNEVVLVAKLQHRNLVRLL 408
           +G+G FG VY G L    GQ+I  AVK L+R +  +  ++F  E +++    H N++ LL
Sbjct: 3   IGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLL 62

Query: 409 GFCLEGE-EKILVYEFVPNKSLDYFLYAQSPKNN 441
           G CL  E   ++V  ++ +  L  F+  +S  +N
Sbjct: 63  GICLPSEGSPLVVLPYMKHGDLRNFI--RSETHN 94

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 43.4 bits (103), Expect = 1e-04
 Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 11/84 (13%)

Query: 352 NKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGG--QEFKNEVVLVAKLQ---HRNLV 405
            ++GEG +G VYK   L +G+ +A+K++     + G       E+ L+ +L+   H N+V
Sbjct: 5   AEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIV 64

Query: 406 RLLGFC----LEGEEKI-LVYEFV 424
           RLL  C     + E K+ LV+E V
Sbjct: 65  RLLDVCHGPRTDRELKLTLVFEHV 88

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 43.4 bits (103), Expect = 1e-04
 Identities = 20/80 (25%), Positives = 42/80 (52%), Gaps = 1/80 (1%)

Query: 352 NKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGF 410
            ++G G +G+VYK   + +G+ +A+K +    G   +  + E+ ++ + +H N+V   G 
Sbjct: 9   QRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGS 68

Query: 411 CLEGEEKILVYEFVPNKSLD 430
            L  ++  +V E+    SL 
Sbjct: 69  YLRRDKLWIVMEYCGGGSLQ 88

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 43.0 bits (102), Expect = 1e-04
 Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 3/77 (3%)

Query: 348 FSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVR 406
           F    KLGEG +G VYK +   +GQ +A+K +     +  QE   E+ ++ +     +V+
Sbjct: 5   FDILEKLGEGSYGSVYKAIHKETGQVVAIKVV--PVEEDLQEIIKEISILKQCDSPYIVK 62

Query: 407 LLGFCLEGEEKILVYEF 423
             G   +  +  +V E+
Sbjct: 63  YYGSYFKNTDLWIVMEY 79

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 43.3 bits (103), Expect = 1e-04
 Identities = 22/80 (27%), Positives = 44/80 (55%), Gaps = 5/80 (6%)

Query: 352 NKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGG--QEFKNEVVLVAKLQHRNLVRLL 408
            ++GEG +G+VYK     +G+ +A+K++   + + G       E+ L+ KL+H N+VRL 
Sbjct: 5   AQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLK 64

Query: 409 GFCLEGEEK--ILVYEFVPN 426
                  +    +V+E++ +
Sbjct: 65  EIVTSKGKGSIYMVFEYMDH 84

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 42.9 bits (101), Expect = 1e-04
 Identities = 27/93 (29%), Positives = 48/93 (51%), Gaps = 3/93 (3%)

Query: 347 NFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKR--LSRSSGQGGQEFKNEVVLVAKLQHRN 403
           +F   NK+G+G FG V+K V  +  +  A+K+  LS+ + +  +E  +E  ++AKL    
Sbjct: 1   DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSY 60

Query: 404 LVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQ 436
           ++R     L+  +  +V E+  N  L   L  Q
Sbjct: 61  IIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQ 93

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score = 43.2 bits (102), Expect = 2e-04
 Identities = 24/75 (32%), Positives = 43/75 (57%), Gaps = 5/75 (6%)

Query: 353 KLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGG--QEFKNEVVLVAKLQHRNLVRLLG 409
           K+GEG +G V+K     + + +A+KR+       G       E+ L+ +L+H+N+VRL  
Sbjct: 7   KIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYD 66

Query: 410 FCLEGEEKI-LVYEF 423
             L  ++K+ LV+E+
Sbjct: 67  -VLHSDKKLTLVFEY 80

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 42.9 bits (101), Expect = 2e-04
 Identities = 31/97 (31%), Positives = 54/97 (55%), Gaps = 8/97 (8%)

Query: 347 NFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRL---SRSSGQGGQEFKNEVVLVAKLQHR 402
           NF    K+GEG +G VYK     +G+ +A+K++   + + G      + E+ L+ +L H 
Sbjct: 1   NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 59

Query: 403 NLVRLLGFCLEGEEKI-LVYEFVPNKSLDYFLYAQSP 438
           N+V+LL   +  E K+ LV+EF+ ++ L  F+ A   
Sbjct: 60  NIVKLLD-VIHTENKLYLVFEFL-HQDLKKFMDASPL 94

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 42.3 bits (99), Expect = 2e-04
 Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 1/78 (1%)

Query: 353 KLGEGGFGEV-YKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFC 411
           K+GEG  G V    V  SG+ +AVK++     Q  +   NEVV++   QH N+V +    
Sbjct: 27  KIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 86

Query: 412 LEGEEKILVYEFVPNKSL 429
           L G+E  +V EF+   +L
Sbjct: 87  LVGDELWVVMEFLEGGAL 104

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 42.4 bits (100), Expect = 3e-04
 Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 7/83 (8%)

Query: 353 KLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKN----EVVLVAKLQHRNLVRL 407
            +GEG +G V K     +GQ +A+K+   S     +  K     E+ ++ +L+H NLV L
Sbjct: 8   LVGEGSYGMVMKCKHKETGQIVAIKKFLESEDD--KMVKKIAMREIRMLKQLRHENLVNL 65

Query: 408 LGFCLEGEEKILVYEFVPNKSLD 430
           +      +   LV+EFV +  LD
Sbjct: 66  IEVFRRKKRLYLVFEFVDHTVLD 88

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl

 Score = 41.9 bits (98), Expect = 3e-04
 Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 11/91 (12%)

Query: 354 LGEGGFGEVYKGVLPSGQEI---AVK--RLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLL 408
           LGEG FG V +G L     I   AVK  +++  +    ++F +E V + +  H N++RL+
Sbjct: 7   LGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLI 66

Query: 409 GFCLEGEEK------ILVYEFVPNKSLDYFL 433
           G CL+  E       +++  F+ +  L  FL
Sbjct: 67  GVCLQTVESEGYPSPVVILPFMKHGDLHSFL 97

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272

>gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2

 Score = 42.3 bits (99), Expect = 3e-04
 Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 5/93 (5%)

Query: 346 NNFSTDNKLGEGGFGEVYKGVLPSG---QEIAVKRLSRSSGQGG-QEFKNEVVLVAKL-Q 400
           N+    + +GEG FG+V K  +       + A+KR+   + +   ++F  E+ ++ KL  
Sbjct: 7   NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 66

Query: 401 HRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL 433
           H N++ LLG C       L  E+ P+ +L  FL
Sbjct: 67  HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL 99

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303

>gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

 Score = 41.9 bits (98), Expect = 3e-04
 Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 2/95 (2%)

Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
           E+   +   + KLG G FGEV+        ++AVK +   S    + F  E  ++  LQH
Sbjct: 2   EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQH 60

Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQ 436
             LV+L     + E   ++ EF+   SL  FL + 
Sbjct: 61  DKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSD 94

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260

>gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

 Score = 41.9 bits (98), Expect = 4e-04
 Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 5/81 (6%)

Query: 354 LGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLE 413
           +G+G FG+V  G    G ++AVK +   +    Q F  E  ++ +L+H NLV+LLG  +E
Sbjct: 14  IGKGEFGDVMLGDY-RGNKVAVKCIKNDAT--AQAFLAEASVMTQLRHSNLVQLLGVIVE 70

Query: 414 GEEKI-LVYEFVPNKSL-DYF 432
            +  + +V E++   SL DY 
Sbjct: 71  EKGGLYIVTEYMAKGSLVDYL 91

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256

>gnl|CDD|133240 cd05109, PTKc_HER2, Catalytic domain of the Protein Tyrosine Kinase, HER2

 Score = 41.9 bits (98), Expect = 4e-04
 Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 8/85 (9%)

Query: 354 LGEGGFGEVYKGV-LPSGQEI----AVKRL-SRSSGQGGQEFKNEVVLVAKLQHRNLVRL 407
           LG G FG VYKG+ +P G+ +    A+K L   +S +  +E  +E  ++A +    + RL
Sbjct: 15  LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRL 74

Query: 408 LGFCLEGEEKILVYEFVPNKS-LDY 431
           LG CL    + LV + +P    LDY
Sbjct: 75  LGICLTSTVQ-LVTQLMPYGCLLDY 98

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER2 does not bind to any known EGFR subfamily ligands, but contributes to the kinase activity of all possible heterodimers. It acts as the preferred partner with other ligand-bound EGFR proteins and functions as a signal amplifier, with the HER2-HER3 heterodimer being the most potent pair in mitogenic signaling. HER2 plays an important role in cell development, proliferation, survival and motility. Overexpression of HER2 results in its activation and downstream signaling, even in the absence of ligand. HER2 overexpression, mainly due to gene amplification, has been shown in a variety of human cancers. Its role in breast cancer is especially well-documented. HER2 is up-regulated in about 25% of breast tumors and is associated with increases in tumor aggressiveness, recurrence and mortality. HER2 is a target for monoclonal antibodies and small molecule inhibitors, which are being developed as treatments for cancer. The first humanized antibody approved for clinical use is Trastuzumab (Herceptin), which is being used in combination with other therapies to improve the survival rates of patients with HER2-overexpressing breast cancer. Length = 279

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 41.6 bits (97), Expect = 4e-04
 Identities = 23/78 (29%), Positives = 47/78 (60%), Gaps = 1/78 (1%)

Query: 353 KLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFC 411
           K+G+G  G V+  + + +GQE+A+K+++       +   NE++++ +L++ N+V  L   
Sbjct: 26  KIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSF 85

Query: 412 LEGEEKILVYEFVPNKSL 429
           L G+E  +V E++   SL
Sbjct: 86  LVGDELFVVMEYLAGGSL 103

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 41.3 bits (98), Expect = 5e-04
 Identities = 23/92 (25%), Positives = 42/92 (45%), Gaps = 3/92 (3%)

Query: 352 NKLGEGGFGEVYKGV-LPSGQEIAVKR--LSRSSGQGGQEFKNEVVLVAKLQHRNLVRLL 408
            ++G+G FG+VY       G+   +K   LS  S +  ++  NEV ++ KL H N+++  
Sbjct: 6   KQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYY 65

Query: 409 GFCLEGEEKILVYEFVPNKSLDYFLYAQSPKN 440
               E  +  +V E+     L   +  Q  + 
Sbjct: 66  ESFEEKGKLCIVMEYADGGDLSQKIKKQKKEG 97

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 41.4 bits (98), Expect = 5e-04
 Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 17/82 (20%)

Query: 353 KLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKN--------EVVLVAKLQ-HR 402
           +LG+G FG VY      +G+ +A+K++        ++F +        EV  + KL  H 
Sbjct: 6   QLGDGTFGSVYLARNKETGELVAIKKMK-------KKFYSWEECMNLREVKSLRKLNEHP 58

Query: 403 NLVRLLGFCLEGEEKILVYEFV 424
           N+V+L     E +E   V+E++
Sbjct: 59  NIVKLKEVFRENDELYFVFEYM 80

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score = 41.4 bits (97), Expect = 5e-04
 Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 1/81 (1%)

Query: 353 KLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCL 412
           +LG G FG V  G      ++A+K +   S     EF  E  ++ KL H  LV+L G C 
Sbjct: 11  ELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCT 69

Query: 413 EGEEKILVYEFVPNKSLDYFL 433
           +     +V E++ N  L  +L
Sbjct: 70  KQRPIYIVTEYMSNGCLLNYL 90

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 41.4 bits (98), Expect = 5e-04
 Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 6/83 (7%)

Query: 347 NFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRL---SRSSGQGGQEFK--NEVVLVAKLQ 400
            +    KLGEG +  VYK     +G+ +A+K++    R   + G  F    E+ L+ +L+
Sbjct: 1   RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELK 60

Query: 401 HRNLVRLLGFCLEGEEKILVYEF 423
           H N++ LL          LV+EF
Sbjct: 61  HPNIIGLLDVFGHKSNINLVFEF 83

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

 Score = 41.5 bits (98), Expect = 6e-04
 Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 8/79 (10%)

Query: 353 KLGEGGFGEVYKGVL---PSGQEIAVKRLSRSSGQG---GQEFKNEVVLVAKLQHRNLVR 406
            +G G +G VYK        G+E A+K+      Q     Q    E+ L+ +L+H N+V 
Sbjct: 7   CIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVS 66

Query: 407 LLGFCLEGEEKI--LVYEF 423
           L+   LE  +K   L++++
Sbjct: 67  LVEVFLEHADKSVYLLFDY 85

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 40.9 bits (96), Expect = 7e-04
 Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 3/90 (3%)

Query: 347 NFSTDNKLGEGGFGEVYK-GVLPSGQEIAVKR--LSRSSGQGGQEFKNEVVLVAKLQHRN 403
           +F    KLG+G +G VYK   L   Q  A+K   L   S +  ++  NE+ ++A + H N
Sbjct: 1   DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPN 60

Query: 404 LVRLLGFCLEGEEKILVYEFVPNKSLDYFL 433
           ++      L+G +  +V E+ P   L   +
Sbjct: 61  IISYKEAFLDGNKLCIVMEYAPFGDLSKAI 90

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes

 Score = 40.8 bits (95), Expect = 7e-04
 Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 2/89 (2%)

Query: 353 KLGEGGFGEVYKGVLPSGQE-IAVKRLSRS-SGQGGQEFKNEVVLVAKLQHRNLVRLLGF 410
           ++G G FGEV+ G L +    +AVK    +       +F  E  ++ +  H N+VRL+G 
Sbjct: 2   RIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGV 61

Query: 411 CLEGEEKILVYEFVPNKSLDYFLYAQSPK 439
           C + +   +V E V       FL  + P+
Sbjct: 62  CTQKQPIYIVMELVQGGDFLTFLRTEGPR 90

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 40.9 bits (95), Expect = 8e-04
 Identities = 23/78 (29%), Positives = 46/78 (58%), Gaps = 1/78 (1%)

Query: 353 KLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFC 411
           K+G+G  G VY  + + +GQE+A+K+++       +   NE++++ + ++ N+V  L   
Sbjct: 26  KIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 85

Query: 412 LEGEEKILVYEFVPNKSL 429
           L G+E  +V E++   SL
Sbjct: 86  LVGDELWVVMEYLAGGSL 103

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 40.8 bits (95), Expect = 9e-04
 Identities = 27/85 (31%), Positives = 47/85 (55%), Gaps = 13/85 (15%)

Query: 353 KLGEGGFGEVYK------GVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVR 406
           +LG+G FG+VYK      G L + + I  K     S +  +++  E+ ++A   H  +V+
Sbjct: 19  ELGDGAFGKVYKAKNKETGALAAAKVIETK-----SEEELEDYMVEIEILATCNHPYIVK 73

Query: 407 LLG-FCLEGEEKILVYEFVPNKSLD 430
           LLG F  +G+  I++ EF P  ++D
Sbjct: 74  LLGAFYWDGKLWIMI-EFCPGGAVD 97

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|133246 cd05115, PTKc_Zap-70, Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

 Score = 39.9 bits (93), Expect = 0.001
 Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 5/88 (5%)

Query: 353 KLGEGGFGEVYKGV--LPSGQ-EIAVKRLSRSSGQG-GQEFKNEVVLVAKLQHRNLVRLL 408
           +LG G FG V KGV  +   Q ++A+K L   + +    E   E  ++ +L +  +VR++
Sbjct: 2   ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMI 61

Query: 409 GFCLEGEEKILVYEFVPNKSLDYFLYAQ 436
           G C E E  +LV E      L+ FL  +
Sbjct: 62  GVC-EAEALMLVMEMASGGPLNKFLSGK 88

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its phosphorylation and activation. It then phosphorylates target proteins, which propagate the signals to downstream pathways. Zap-70 is hardly detected in normal peripheral B-cells, but is present in some B-cell malignancies. It is used as a diagnostic marker for chronic lymphocytic leukemia (CLL) as it is associated with the more aggressive subtype of the disease. Length = 257

>gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional

 Score = 40.6 bits (95), Expect = 0.001
 Identities = 41/159 (25%), Positives = 72/159 (45%), Gaps = 22/159 (13%)

Query: 282 ISSSTIIAIVAPIAVTAVLFIVGLCYFIRKAKNKYNAVPEVN-ADNDITTLESLQFDFE- 339
             + T+ A +  +A+ A  F+     FIR   N      E+   +N+  T E   FD + 
Sbjct: 631 YITCTLGAFLV-LALVAFGFV-----FIRGRNNL-----ELKRVENEDGTWELQFFDSKV 679

Query: 340 ----TIEVATNNFSTDNKLGEGGFGEVYKG-VLPSGQEIAVKRLSRSSGQGGQEFKNEVV 394
               TI    ++   +N +  G  G  YKG  + +G +  VK ++  +     E  +   
Sbjct: 680 SKSITINDILSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSIPSSEIAD--- 736

Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL 433
            + KLQH N+V+L+G C   +   L++E++  K+L   L
Sbjct: 737 -MGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVL 774

Length = 968

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score = 39.6 bits (93), Expect = 0.002
 Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 3/75 (4%)

Query: 353 KLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGG--QEFKNEVVLVAKLQHRNLVRLLG 409
           K+GEG +G VYK     +G+ +A+K++   +   G       E+ L+ +L H N+VRLL 
Sbjct: 6   KIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLD 65

Query: 410 FCLEGEEKILVYEFV 424
                 +  LV+EF+
Sbjct: 66  VVHSENKLYLVFEFL 80

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 39.4 bits (92), Expect = 0.002
 Identities = 24/88 (27%), Positives = 48/88 (54%), Gaps = 13/88 (14%)

Query: 354 LGEGGFGEVYKGV-LPSGQEIAVKRL---SRSSGQGGQE-------FKNEVVLVAKLQHR 402
           +G+G +G VY  + + +G+ +AVK++   +  +G+            ++E+  +  L H 
Sbjct: 9   IGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHL 68

Query: 403 NLVRLLGFCLEGEEKILVY-EFVPNKSL 429
           N+V+ LGF    EE + ++ E+VP  S+
Sbjct: 69  NIVQYLGF-ETTEEYLSIFLEYVPGGSI 95

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 39.6 bits (92), Expect = 0.002
 Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 1/78 (1%)

Query: 353 KLGEGGFGEVYKGVLP-SGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFC 411
           K+GEG  G V       SG+++AVK +     Q  +   NEVV++   QH+N+V +    
Sbjct: 28  KIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSY 87

Query: 412 LEGEEKILVYEFVPNKSL 429
           L GEE  ++ EF+   +L
Sbjct: 88  LVGEELWVLMEFLQGGAL 105

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 39.6 bits (92), Expect = 0.002
 Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 1/78 (1%)

Query: 353 KLGEGGFGEVYKGVLP-SGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFC 411
           K+GEG  G V       +G+++AVK++     Q  +   NEVV++    H N+V +    
Sbjct: 29  KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSY 88

Query: 412 LEGEEKILVYEFVPNKSL 429
           L G+E  +V EF+   +L
Sbjct: 89  LVGDELWVVMEFLEGGAL 106

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 39.7 bits (92), Expect = 0.002
 Identities = 22/78 (28%), Positives = 46/78 (58%), Gaps = 1/78 (1%)

Query: 353 KLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFC 411
           K+G+G  G VY  + + +GQE+A+++++       +   NE++++ + ++ N+V  L   
Sbjct: 27  KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 86

Query: 412 LEGEEKILVYEFVPNKSL 429
           L G+E  +V E++   SL
Sbjct: 87  LVGDELWVVMEYLAGGSL 104

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 39.5 bits (93), Expect = 0.002
 Identities = 25/105 (23%), Positives = 45/105 (42%), Gaps = 21/105 (20%)

Query: 337 DFETIEVATNNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSGQGGQEFKNEVVL 395
           DF+  ++          +GEG F  V       + +E A+K L +   Q  +E K + V 
Sbjct: 2   DFKFGKI----------IGEGSFSTVVLAKEKETNKEYAIKILDKR--QLIKEKKVKYVK 49

Query: 396 VAKL------QHRNLVRLLGFCLEGEEKI-LVYEFVPNKSLDYFL 433
           + K        H  +++L  +  + EE +  V E+ PN  L  ++
Sbjct: 50  IEKEVLTRLNGHPGIIKLY-YTFQDEENLYFVLEYAPNGELLQYI 93

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

 Score = 38.9 bits (90), Expect = 0.004
 Identities = 28/105 (26%), Positives = 47/105 (44%), Gaps = 11/105 (10%)

Query: 335 QFDFETIEVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEV 393
           Q D+E I+          ++G G +G+VYK   L +G+  AVK +    G      + E+
Sbjct: 8   QHDYELIQ----------RVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEI 57

Query: 394 VLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSP 438
            +V + +H N+V   G  L  E+  +  E+    SL    +   P
Sbjct: 58  FMVKECKHCNIVAYFGSYLSREKLWICMEYCGGGSLQDIYHVTGP 102

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267

>gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

 Score = 38.4 bits (89), Expect = 0.004
 Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 6/86 (6%)

Query: 353 KLGEGGFGEVYKGVL---PSGQEIAVKRLSRSSGQGG--QEFKNEVVLVAKLQHRNLVRL 407
           +LG G FG V KG+     S + +AVK L   +       E   E  ++ +L +  +VR+
Sbjct: 2   ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRM 61

Query: 408 LGFCLEGEEKILVYEFVPNKSLDYFL 433
           +G C E E  +LV E      L+ FL
Sbjct: 62  IGIC-EAESWMLVMELAELGPLNKFL 86

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	451
PF01657	106	Stress-antifung: Salt stress response/antifungal;	99.92
KOG1187	361	consensus Serine/threonine protein kinase [Signal	99.87
PF01657	106	Stress-antifung: Salt stress response/antifungal;	99.81
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	99.7
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	99.69
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.65
KOG3653	534	consensus Transforming growth factor beta/activin	99.64
KOG0595	429	consensus Serine/threonine-protein kinase involved	99.61
KOG2052	513	consensus Activin A type IB receptor, serine/threo	99.61
KOG0192	362	consensus Tyrosine kinase specific for activated (	99.57
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	99.57
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	99.56
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	99.52
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.5
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.46
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	99.46
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	99.33
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	99.31
KOG0575	592	consensus Polo-like serine/threonine protein kinas	99.3
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.3
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.27
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	99.23
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.23
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	99.21
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.2
PHA02988	283	hypothetical protein; Provisional	99.2
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.2
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.2
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.2
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	99.2
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	99.2
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.19
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	99.19
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.19
KOG4721	904	consensus Serine/threonine protein kinase, contain	99.19
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.18
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.17
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.17
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.16
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.16
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.16
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.15
KOG0611	668	consensus Predicted serine/threonine protein kinas	99.15
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.14
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.14
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.14
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	99.13
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.13
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.13
KOG0581	364	consensus Mitogen-activated protein kinase kinase	99.13
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.12
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	99.12
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.12
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.12
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.11
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.11
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.11
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.11
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.11
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.1
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.1
KOG0605	550	consensus NDR and related serine/threonine kinases	99.1
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.1
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.1
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.09
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	99.09
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.09
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.08
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.08
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.08
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.08
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.08
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.08
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.08
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.08
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.08
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.07
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.07
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.07
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.07
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.07
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.07
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.06
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.06
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.06
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.06
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.06
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.06
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.06
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.06
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.06
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.06
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.06
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.06
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.06
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.05
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.05
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.05
KOG0582	516	consensus Ste20-like serine/threonine protein kina	99.05
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.05
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.04
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.04
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.04
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.04
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.04
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.04
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.04
KOG0198	313	consensus MEKK and related serine/threonine protei	99.04
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.03
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.03
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.03
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.03
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.03
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	99.03
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.03
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.03
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.03
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.03
KOG0586	596	consensus Serine/threonine protein kinase [General	99.02
KOG0661	538	consensus MAPK related serine/threonine protein ki	99.02
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.02
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.02
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.02
PTZ00267	478	NIMA-related protein kinase; Provisional	99.02
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.02
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.02
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.02
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.01
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.01
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.01
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.01
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.01
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.01
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.01
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.01
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.01
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.01
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.01
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.0
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.0
KOG0598	357	consensus Ribosomal protein S6 kinase and related	99.0
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.0
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.0
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.0
KOG0583	370	consensus Serine/threonine protein kinase [Signal	98.99
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	98.99
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	98.99
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	98.99
PLN00034	353	mitogen-activated protein kinase kinase; Provision	98.99
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	98.99
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	98.98
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	98.98
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	98.98
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	98.98
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	98.98
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	98.98
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	98.98
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	98.98
KOG0578	550	consensus p21-activated serine/threonine protein k	98.98
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	98.98
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	98.98
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	98.98
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	98.98
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	98.98
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	98.97
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	98.97
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	98.97
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	98.97
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	98.97
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	98.97
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	98.97
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	98.97
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	98.97
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	98.97
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	98.97
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	98.97
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	98.96
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	98.96
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	98.96
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	98.96
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	98.96
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	98.96
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	98.96
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	98.96
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	98.95
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	98.95
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	98.95
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	98.95
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	98.95
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	98.95
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	98.95
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	98.95
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	98.95
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	98.95
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	98.94
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	98.94
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	98.94
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	98.94
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	98.94
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	98.94
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	98.94
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	98.93
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	98.93
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	98.93
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	98.93
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	98.93
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	98.93
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	98.92
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	98.92
KOG0577	948	consensus Serine/threonine protein kinase [Signal	98.92
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	98.92
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	98.92
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	98.92
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	98.92
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	98.92
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	98.92
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	98.91
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	98.91
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	98.91
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	98.91
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	98.91
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	98.9
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	98.9
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	98.9
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	98.9
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	98.9
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	98.9
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	98.9
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	98.89
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	98.89
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	98.89
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	98.89
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	98.89
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	98.89
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	98.89
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	98.89
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	98.89
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	98.88
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	98.88
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	98.88
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	98.88
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	98.88
PTZ00266	1021	NIMA-related protein kinase; Provisional	98.88
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	98.88
KOG1989	738	consensus ARK protein kinase family [Signal transd	98.88
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	98.88
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	98.87
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	98.87
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	98.87
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	98.87
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	98.87
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	98.87
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	98.87
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	98.87
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	98.86
KOG0607	463	consensus MAP kinase-interacting kinase and relate	98.86
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	98.86
KOG0201	467	consensus Serine/threonine protein kinase [Signal	98.86
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	98.86
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	98.86
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	98.86
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	98.86
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	98.86
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	98.86
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	98.86
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	98.85
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	98.85
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	98.85
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	98.85
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	98.84
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	98.84
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	98.84
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	98.84
PLN03224	507	probable serine/threonine protein kinase; Provisio	98.84
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	98.84
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	98.83
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	98.83
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	98.83
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	98.83
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	98.83
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	98.83
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	98.83
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	98.82
PHA03212	391	serine/threonine kinase US3; Provisional	98.82
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	98.82
KOG0589	426	consensus Serine/threonine protein kinase [General	98.82
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	98.81
KOG0610	459	consensus Putative serine/threonine protein kinase	98.81
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	98.81
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	98.81
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	98.81
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	98.8
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	98.8
PTZ00283	496	serine/threonine protein kinase; Provisional	98.8
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	98.8
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	98.8
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	98.79
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	98.79
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	98.79
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	98.78
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	98.78
PHA03211	461	serine/threonine kinase US3; Provisional	98.77
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	98.76
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	98.76
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	98.76
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	98.76
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	98.76
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	98.75
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	98.74
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	98.74
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	98.74
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	98.73
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	98.73
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	98.73
PRK09188	365	serine/threonine protein kinase; Provisional	98.73
PLN00009	294	cyclin-dependent kinase A; Provisional	98.72
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	98.71
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	98.71
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	98.71
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	98.7
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	98.69
KOG4717	864	consensus Serine/threonine protein kinase [Signal	98.69
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	98.68
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	98.68
PHA03209	357	serine/threonine kinase US3; Provisional	98.67
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	98.67
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	98.66
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	98.66
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	98.65
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	98.65
PTZ00024	335	cyclin-dependent protein kinase; Provisional	98.64
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	98.64
PTZ00036	440	glycogen synthase kinase; Provisional	98.64
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	98.63
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	98.63
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	98.63
PHA03207	392	serine/threonine kinase US3; Provisional	98.63
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	98.63
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	98.63
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	98.62
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	98.61
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	98.61
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	98.61
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	98.61
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	98.6
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	98.59
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	98.59
KOG0694	694	consensus Serine/threonine protein kinase [Signal	98.58
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	98.58
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	98.58
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	98.58
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	98.58
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	98.58
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	98.57
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	98.57
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	98.56
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	98.56
PRK10345	210	hypothetical protein; Provisional	98.55
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	98.54
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	98.54
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	98.54
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	98.54
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	98.54
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	98.53
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	98.53
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	98.52
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	98.51
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	98.51
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	98.49
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	98.45
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	98.45
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	98.44
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	98.43
PTZ00284	467	protein kinase; Provisional	98.42
KOG0576	829	consensus Mitogen-activated protein kinase kinase	98.38
KOG0584	632	consensus Serine/threonine protein kinase [General	98.37
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	98.34
PRK14879	211	serine/threonine protein kinase; Provisional	98.34
PHA03210	501	serine/threonine kinase US3; Provisional	98.32
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	98.31
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	98.28
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	98.28
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	98.27
KOG1152	772	consensus Signal transduction serine/threonine kin	98.26
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	98.25
KOG0596	677	consensus Dual specificity; serine/threonine and t	98.23
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	98.21
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	98.21
PRK09605	535	bifunctional UGMP family protein/serine/threonine	98.19
KOG0690	516	consensus Serine/threonine protein kinase [Signal	98.14
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	98.12
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	98.11
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	98.04
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	97.98
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	97.93
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	97.84
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	97.81
KOG1167	418	consensus Serine/threonine protein kinase of the C	97.75
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	97.72
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	97.71
smart00090	237	RIO RIO-like kinase.	97.65
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	97.6
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	97.59
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	97.49
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	97.49
KOG1027	903	consensus Serine/threonine protein kinase and endo	97.48
KOG0696	683	consensus Serine/threonine protein kinase [Signal	97.45
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	97.44
PHA02882	294	putative serine/threonine kinase; Provisional	97.4
KOG0695	593	consensus Serine/threonine protein kinase [Signal	97.33
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	97.26
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	97.22
PRK12274	218	serine/threonine protein kinase; Provisional	97.18
KOG1290	590	consensus Serine/threonine protein kinase [Signal	97.16
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	97.12
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	97.08
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	97.07
COG0515	384	SPS1 Serine/threonine protein kinase [General func	97.05
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	96.9
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	96.83
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	96.75
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	96.71
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	96.65
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	96.62
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	96.61
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	96.23
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	96.12
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	95.43
PF08693	40	SKG6: Transmembrane alpha-helix domain; InterPro:	94.7
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	94.42
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	94.1
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	93.81
COG0661	517	AarF Predicted unusual protein kinase [General fun	91.94
PF04478	154	Mid2: Mid2 like cell wall stress sensor; InterPro:	91.66
PF03109	119	ABC1: ABC1 family; InterPro: IPR004147 This entry	91.61
KOG1243	690	consensus Protein kinase [General function predict	90.41
PF01102	122	Glycophorin_A: Glycophorin A; InterPro: IPR001195	88.61
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	87.96
KOG4258	1025	consensus Insulin/growth factor receptor (contains	86.86
KOG1235	538	consensus Predicted unusual protein kinase [Genera	86.67
PF06697	278	DUF1191: Protein of unknown function (DUF1191); In	85.06
PTZ00382	96	Variant-specific surface protein (VSP); Provisiona	84.92
PF15102	146	TMEM154: TMEM154 protein family	84.47
PRK10593	297	hypothetical protein; Provisional	84.3
KOG3087	229	consensus Serine/threonine protein kinase [General	83.19
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	82.72
PLN02876	822	acyl-CoA dehydrogenase	81.63
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	80.55

>PF01657 Stress-antifung: Salt stress response/antifungal; InterPro: IPR002902 This domain is found in plants and has no known function

Probab=99.92  E-value=1.2e-25  Score=182.16  Aligned_cols=101  Identities=44%  Similarity=0.869  Sum_probs=77.2

Q ss_pred             cCCCC----ccc-cCCChHHHHHHHHHHhcccccCCCCCCCCCceecccCCCCCeEEEEEEeeCCCCccchHHHHHHHHH
Q 013018           39 YHVCS----ANF-TGNSTYQTNRNLLLSSLPTNASRGNGYSSGFYNETTGQDPNKVYGLFLCRGDQTASSCQDCVTFATR  113 (451)
Q Consensus        39 ~~~c~----~~~-~~~~~~~~~l~~ll~~l~~~a~~~~~~~~~f~~~~~~~~~~~vygl~qC~~d~~~~~C~~Cl~~a~~  113 (451)
                      |+.|+    +++ +++++|+++|+.||++|.++|+..  .+.+|++++.|.++++||||+||++|+++.+|..||+.|+.
T Consensus         1 ~~~Cs~~~~~~~~~~~~~f~~~l~~ll~~l~~~a~~~--~~~~f~~~~~~~~~~~vYgl~qC~~Dls~~dC~~Cl~~a~~   78 (106)
T PF01657_consen    1 WHFCSSNTNNNYTTDNSTFEQNLNSLLSSLVSNAASS--SSKGFATGSAGSGPDTVYGLAQCRGDLSPSDCRACLADAVA   78 (106)
T ss_dssp             ---E---SSB----TT-THHHHHHHHHHHHHHHGGGT--T-TEEEEEE--ST---EEEEEEE-TTS-HHHHHHHHHHHHC
T ss_pred             CCcCCCCCCCCcCCCCchHHHHHHHHHHHHHHHHhhc--cccCcEEeecCCCCCeEEEEEEcCCCCChhhhHHHHHHHHH
Confidence            56774    345 577889999999999999998532  14689999988888999999999999999999999999999


Q ss_pred             HHhhhCCCCceeEEEcceeEEEEccccc
Q 013018          114 DLVQRCPDGKQTIIWYDQCLLRYSNRSI  141 (451)
Q Consensus       114 ~~~~~c~~~~~~~i~~~~C~~ry~~~~f  141 (451)
                      ++...|++++||+||+++|+||||+++|
T Consensus        79 ~~~~~C~~~~g~~v~~~~C~lRY~~~~F  106 (106)
T PF01657_consen   79 NISSCCPGSRGGRVWYDSCFLRYENYPF  106 (106)
T ss_dssp             CHHHHTTSBSSEEEEESSEEEEEESS--
T ss_pred             HHHHhCCCCceEEEECCCEEEEEECCCC
Confidence            9999999999999999999999999998

The structure of this domain is known and it is thought to be involved in antifungal responses in plants []. Two copies of this domain are also found together in cysteine-rich protein kinases and cysteine-rich repeat secretory proteins. The domain contains four conserved cysteines.; PDB: 3A2E_D.

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.87  E-value=4.7e-22  Score=195.66  Aligned_cols=118  Identities=49%  Similarity=0.857  Sum_probs=106.7

Q ss_pred             cccccChHHHHHhhccccccceecccCceeEEEEEcCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEE
Q 013018          332 ESLQFDFETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFC  411 (451)
Q Consensus       332 ~~~~~~~~~l~~~~~~~~~~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~  411 (451)
                      ....|++.+++.+|++|+..+.||+|+||.||+|.+++|..||||++.....+...+|.+|+.++.+++|||||+|+|+|
T Consensus        61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC  140 (361)
T KOG1187|consen   61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC  140 (361)
T ss_pred             CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence            34568999999999999999999999999999999999999999988776543145699999999999999999999999


Q ss_pred             EeCc-eeeEEEeccCCCCHHHHHhccCCCCCCchhhhhcc
Q 013018          412 LEGE-EKILVYEFVPNKSLDYFLYAQSPKNNNNWIGQDAT  450 (451)
Q Consensus       412 ~~~~-~~~lv~ey~~~GsL~~~L~~~~~~~~l~W~~r~~~  450 (451)
                      .+.+ +.+||||||++|+|+++|+..... .|+|.+|+++
T Consensus       141 ~e~~~~~~LVYEym~nGsL~d~L~~~~~~-~L~W~~R~kI  179 (361)
T KOG1187|consen  141 LEGGEHRLLVYEYMPNGSLEDHLHGKKGE-PLDWETRLKI  179 (361)
T ss_pred             ecCCceEEEEEEccCCCCHHHHhCCCCCC-CCCHHHHHHH
Confidence            9988 599999999999999999986655 8999999986

>PF01657 Stress-antifung: Salt stress response/antifungal; InterPro: IPR002902 This domain is found in plants and has no known function

Probab=99.81  E-value=4.5e-20  Score=149.53  Aligned_cols=92  Identities=48%  Similarity=0.857  Sum_probs=75.9

Q ss_pred             CchhhHHHHHHHHHHHHHHHHhcC-CccceeeecccCCcccEEEEEEecCCCChhchHHHHHHHHhhcccccCCCCCcEE
Q 013018          160 TDRGRFNQILASLMSQVVNQAVNN-SRKFATRTANFTALQTLYSLAQCTPDLSSSDCNVCLQAAIAELPNCCSGKTGAQV  238 (451)
Q Consensus       160 ~~~~~f~~~~~~ll~~l~~~a~~~-~~~~a~~~~~~~~~~~vy~laqC~~dl~~~~C~~Cl~~~~~~~~~~c~~~~g~~v  238 (451)
                      ++.+.|++++.+||..|.+.|+.+ +.+|++++. ..+.++||||+||++|+++++|..||+.++..++.+|+++.|+++
T Consensus        14 ~~~~~f~~~l~~ll~~l~~~a~~~~~~~f~~~~~-~~~~~~vYgl~qC~~Dls~~dC~~Cl~~a~~~~~~~C~~~~g~~v   92 (106)
T PF01657_consen   14 TDNSTFEQNLNSLLSSLVSNAASSSSKGFATGSA-GSGPDTVYGLAQCRGDLSPSDCRACLADAVANISSCCPGSRGGRV   92 (106)
T ss_dssp             -TT-THHHHHHHHHHHHHHHGGGTT-TEEEEEE---ST---EEEEEEE-TTS-HHHHHHHHHHHHCCHHHHTTSBSSEEE
T ss_pred             CCCchHHHHHHHHHHHHHHHHhhccccCcEEeec-CCCCCeEEEEEEcCCCCChhhhHHHHHHHHHHHHHhCCCCceEEE
Confidence            456669999999999999998865 478999986 357889999999999999999999999999999999999999999


Q ss_pred             Eccccccccccccc
Q 013018          239 LIPSCIVRYEFYPF  252 (451)
Q Consensus       239 ~~~~C~~ry~~~~f  252 (451)
                      +.+.|++||+.++|
T Consensus        93 ~~~~C~lRY~~~~F  106 (106)
T PF01657_consen   93 WYDSCFLRYENYPF  106 (106)
T ss_dssp             EESSEEEEEESS--
T ss_pred             ECCCEEEEEECCCC
Confidence            99999999999986

The structure of this domain is known and it is thought to be involved in antifungal responses in plants []. Two copies of this domain are also found together in cysteine-rich protein kinases and cysteine-rich repeat secretory proteins. The domain contains four conserved cysteines.; PDB: 3A2E_D.

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.70  E-value=1.9e-17  Score=170.37  Aligned_cols=103  Identities=38%  Similarity=0.660  Sum_probs=89.8

Q ss_pred             hHHHHHhhccccccceecccCceeEEEEEcC------CCcEEEEEEeccCChh-hHHHHHHHHHHHhcCCCCCcccceeE
Q 013018          338 FETIEVATNNFSTDNKLGEGGFGEVYKGVLP------SGQEIAVKRLSRSSGQ-GGQEFKNEVVLVAKLQHRNLVRLLGF  410 (451)
Q Consensus       338 ~~~l~~~~~~~~~~~~lG~G~fg~V~~~~l~------~g~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~g~  410 (451)
                      ....++.+.++...++||+|+||+||+|...      +.+.||||.++..... ...+|.+|+++|..++|||||+|+|+
T Consensus       478 ~~~~~i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGV  557 (774)
T KOG1026|consen  478 LKVLEIPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGV  557 (774)
T ss_pred             cceeEechhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEE
Confidence            3445667778888999999999999999943      3457999999876544 67899999999999999999999999


Q ss_pred             EEeCceeeEEEeccCCCCHHHHHhccCCCC
Q 013018          411 CLEGEEKILVYEFVPNKSLDYFLYAQSPKN  440 (451)
Q Consensus       411 ~~~~~~~~lv~ey~~~GsL~~~L~~~~~~~  440 (451)
                      |..++++++|+|||.+|||++||+.+.+..
T Consensus       558 C~~~~P~~MvFEYm~~GDL~eFLra~sP~a  587 (774)
T KOG1026|consen  558 CREGDPLCMVFEYMDHGDLHEFLRARSPKA  587 (774)
T ss_pred             EccCCeeEEEEEecccccHHHHHHhhCCcc
Confidence            999999999999999999999999876544

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=99.69  E-value=2.1e-17  Score=167.59  Aligned_cols=103  Identities=26%  Similarity=0.473  Sum_probs=88.5

Q ss_pred             HHhhccccccceecccCceeEEEEEcCC----CcEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCce
Q 013018          342 EVATNNFSTDNKLGEGGFGEVYKGVLPS----GQEIAVKRLSRS-SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEE  416 (451)
Q Consensus       342 ~~~~~~~~~~~~lG~G~fg~V~~~~l~~----g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~  416 (451)
                      |+..+.+++.++||.|.||.|++|.++-    ...||||.|+.. ..+.+.+|+.|+.||.+++||||++|.|+.....+
T Consensus       625 EId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~P  704 (996)
T KOG0196|consen  625 EIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKP  704 (996)
T ss_pred             hcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCce
Confidence            3445567889999999999999999642    357999999876 44556899999999999999999999999999999


Q ss_pred             eeEEEeccCCCCHHHHHhccCCCCCCchhh
Q 013018          417 KILVYEFVPNKSLDYFLYAQSPKNNNNWIG  446 (451)
Q Consensus       417 ~~lv~ey~~~GsL~~~L~~~~~~~~l~W~~  446 (451)
                      ++||+|||+||+|+.||+.+.++  +.|.|
T Consensus       705 vMIiTEyMENGsLDsFLR~~DGq--ftviQ  732 (996)
T KOG0196|consen  705 VMIITEYMENGSLDSFLRQNDGQ--FTVIQ  732 (996)
T ss_pred             eEEEhhhhhCCcHHHHHhhcCCc--eEeeh
Confidence            99999999999999999987643  56654

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.65  E-value=2.5e-16  Score=155.14  Aligned_cols=96  Identities=30%  Similarity=0.559  Sum_probs=87.4

Q ss_pred             HHhhccccccceecccCceeEEEEEcCCCcEEEEEEeccCChh-hHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEE
Q 013018          342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQ-GGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILV  420 (451)
Q Consensus       342 ~~~~~~~~~~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv  420 (451)
                      +.+++.+...++||+|.||.|..+....+..||||+++..... ...+|.+|+++|.+++||||++|+|+|..++++++|
T Consensus       534 EfPRs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI  613 (807)
T KOG1094|consen  534 EFPRSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMI  613 (807)
T ss_pred             hcchhheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHH
Confidence            4566778889999999999999999978899999999876544 458999999999999999999999999999999999


Q ss_pred             EeccCCCCHHHHHhccC
Q 013018          421 YEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       421 ~ey~~~GsL~~~L~~~~  437 (451)
                      +|||++|+|.+||..+.
T Consensus       614 ~EYmEnGDLnqFl~ahe  630 (807)
T KOG1094|consen  614 TEYMENGDLNQFLSAHE  630 (807)
T ss_pred             HHHHhcCcHHHHHHhcc
Confidence            99999999999999874

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=99.64  E-value=9.2e-16  Score=148.10  Aligned_cols=94  Identities=31%  Similarity=0.485  Sum_probs=77.8

Q ss_pred             ccccccceecccCceeEEEEEcCCCcEEEEEEeccCChhhHHHHHHHHHHHh--cCCCCCcccceeEEEeCc----eeeE
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVA--KLQHRNLVRLLGFCLEGE----EKIL  419 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~--~l~h~niv~l~g~~~~~~----~~~l  419 (451)
                      ..++..++||+|+||.||||++ +++.||||++...   +.+.|.+|-.+.+  .++|+||+++++.-....    +.+|
T Consensus       210 ~pl~l~eli~~Grfg~V~KaqL-~~~~VAVKifp~~---~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywL  285 (534)
T KOG3653|consen  210 DPLQLLELIGRGRFGCVWKAQL-DNRLVAVKIFPEQ---EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWL  285 (534)
T ss_pred             CchhhHHHhhcCccceeehhhc-cCceeEEEecCHH---HHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeE
Confidence            4456678999999999999999 6699999999643   4567777766655  568999999999877655    8899


Q ss_pred             EEeccCCCCHHHHHhccCCCCCCchhhh
Q 013018          420 VYEFVPNKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       420 v~ey~~~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                      |+||.++|+|.+||+.+.    ++|..-
T Consensus       286 Vt~fh~kGsL~dyL~~nt----isw~~~  309 (534)
T KOG3653|consen  286 VTEFHPKGSLCDYLKANT----ISWNSL  309 (534)
T ss_pred             EeeeccCCcHHHHHHhcc----ccHHHH
Confidence            999999999999999754    688653

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.61  E-value=1.7e-15  Score=144.03  Aligned_cols=92  Identities=26%  Similarity=0.475  Sum_probs=82.6

Q ss_pred             ccccccceecccCceeEEEEE-cCCCcEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEe
Q 013018          346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRS--SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  422 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  422 (451)
                      .+|...+.||+|+|+.||+|+ .+++..||||.+...  ..+..+.+..|+++|+.++|||||+|+.++..++.++||||
T Consensus        10 ~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVME   89 (429)
T KOG0595|consen   10 GDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVME   89 (429)
T ss_pred             ccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEEE
Confidence            456677889999999999999 456899999999766  55566778999999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhccC
Q 013018          423 FVPNKSLDYFLYAQS  437 (451)
Q Consensus       423 y~~~GsL~~~L~~~~  437 (451)
                      ||.+|||.+||+.++
T Consensus        90 yC~gGDLs~yi~~~~  104 (429)
T KOG0595|consen   90 YCNGGDLSDYIRRRG  104 (429)
T ss_pred             eCCCCCHHHHHHHcC
Confidence            999999999999865

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.61  E-value=1.8e-15  Score=145.18  Aligned_cols=89  Identities=24%  Similarity=0.427  Sum_probs=75.3

Q ss_pred             hccccccceecccCceeEEEEEcCCCcEEEEEEeccCChhhHHHHHHHHHHHhc--CCCCCcccceeEEEeCc----eee
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAK--LQHRNLVRLLGFCLEGE----EKI  418 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~g~~~~~~----~~~  418 (451)
                      ...+...+.||+|+||.||+|.+ .|+.||||++...   ++..|.+|.++...  |+|+||+.+++....+.    ++|
T Consensus       210 arqI~L~e~IGkGRyGEVwrG~w-rGe~VAVKiF~sr---dE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLw  285 (513)
T KOG2052|consen  210 ARQIVLQEIIGKGRFGEVWRGRW-RGEDVAVKIFSSR---DERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLW  285 (513)
T ss_pred             hheeEEEEEecCccccceeeccc-cCCceEEEEeccc---chhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEE
Confidence            34577889999999999999999 8999999999754   34677888887765  69999999999876543    789


Q ss_pred             EEEeccCCCCHHHHHhccC
Q 013018          419 LVYEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       419 lv~ey~~~GsL~~~L~~~~  437 (451)
                      ||++|.|+|||.+||.++.
T Consensus       286 LvTdYHe~GSL~DyL~r~t  304 (513)
T KOG2052|consen  286 LVTDYHEHGSLYDYLNRNT  304 (513)
T ss_pred             EeeecccCCcHHHHHhhcc
Confidence            9999999999999999743

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=99.57  E-value=4.6e-15  Score=145.43  Aligned_cols=101  Identities=29%  Similarity=0.487  Sum_probs=84.6

Q ss_pred             ccccceecccCceeEEEEEcCCCcEEEEEEeccCC--hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCc-eeeEEEecc
Q 013018          348 FSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSS--GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGE-EKILVYEFV  424 (451)
Q Consensus       348 ~~~~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~-~~~lv~ey~  424 (451)
                      +...+.||+|+||+||+|.+.....||||++....  ....++|.+|+.+|.+++|||||+|+|+|.... ...||+|||
T Consensus        43 l~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~  122 (362)
T KOG0192|consen   43 LPIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYM  122 (362)
T ss_pred             hhhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeC
Confidence            34456699999999999999444449999997542  222568999999999999999999999999887 789999999


Q ss_pred             CCCCHHHHHhccCCCCCCchhhhhc
Q 013018          425 PNKSLDYFLYAQSPKNNNNWIGQDA  449 (451)
Q Consensus       425 ~~GsL~~~L~~~~~~~~l~W~~r~~  449 (451)
                      ++|+|.++|+.. .+..|+|..++.
T Consensus       123 ~~GsL~~~l~~~-~~~~l~~~~~l~  146 (362)
T KOG0192|consen  123 PGGSLSVLLHKK-RKRKLPLKVRLR  146 (362)
T ss_pred             CCCcHHHHHhhc-ccCCCCHHHHHH
Confidence            999999999985 445689988775

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=99.57  E-value=2e-15  Score=148.38  Aligned_cols=96  Identities=31%  Similarity=0.548  Sum_probs=84.5

Q ss_pred             HHHHHhhccccccceecccCceeEEEEEcCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceee
Q 013018          339 ETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKI  418 (451)
Q Consensus       339 ~~l~~~~~~~~~~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~  418 (451)
                      +.+++..+.++..+.||+|.||.||.|.+.....||+|.++... ...++|.+|+.+|++|+|+|||+|+|+|..+++++
T Consensus       199 d~wei~r~~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~-m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piy  277 (468)
T KOG0197|consen  199 DPWEIPREELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGS-MSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIY  277 (468)
T ss_pred             CCeeecHHHHHHHHHhcCCccceEEEEEEcCCCcccceEEeccc-cChhHHHHHHHHHHhCcccCeEEEEEEEecCCceE
Confidence            33445555667789999999999999999777799999998753 34578999999999999999999999999989999


Q ss_pred             EEEeccCCCCHHHHHhc
Q 013018          419 LVYEFVPNKSLDYFLYA  435 (451)
Q Consensus       419 lv~ey~~~GsL~~~L~~  435 (451)
                      ||+|||++|+|.+||+.
T Consensus       278 IVtE~m~~GsLl~yLr~  294 (468)
T KOG0197|consen  278 IVTEYMPKGSLLDYLRT  294 (468)
T ss_pred             EEEEecccCcHHHHhhh
Confidence            99999999999999997

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.56  E-value=4.9e-15  Score=147.71  Aligned_cols=109  Identities=31%  Similarity=0.448  Sum_probs=91.0

Q ss_pred             hHHHHHhhccccccceecccCceeEEEEEcCC--C---cEEEEEEecc---CChhhHHHHHHHHHHHhcCCCCCccccee
Q 013018          338 FETIEVATNNFSTDNKLGEGGFGEVYKGVLPS--G---QEIAVKRLSR---SSGQGGQEFKNEVVLVAKLQHRNLVRLLG  409 (451)
Q Consensus       338 ~~~l~~~~~~~~~~~~lG~G~fg~V~~~~l~~--g---~~vavK~l~~---~~~~~~~~~~~E~~~l~~l~h~niv~l~g  409 (451)
                      -+.++...+++...++||+|+||.||+|.+..  +   ..||||....   .......+|++|+++|++++|||||+|+|
T Consensus       149 r~~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yG  228 (474)
T KOG0194|consen  149 RQKWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYG  228 (474)
T ss_pred             ccccEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEE
Confidence            34566666777778999999999999999643  2   2389999875   23556789999999999999999999999


Q ss_pred             EEEeCceeeEEEeccCCCCHHHHHhccCCCCCCchhhhh
Q 013018          410 FCLEGEEKILVYEFVPNKSLDYFLYAQSPKNNNNWIGQD  448 (451)
Q Consensus       410 ~~~~~~~~~lv~ey~~~GsL~~~L~~~~~~~~l~W~~r~  448 (451)
                      ++....+++||||+|.+|+|.+||+....  .+++.+|+
T Consensus       229 Va~~~~Pl~ivmEl~~gGsL~~~L~k~~~--~v~~~ek~  265 (474)
T KOG0194|consen  229 VAVLEEPLMLVMELCNGGSLDDYLKKNKK--SLPTLEKL  265 (474)
T ss_pred             EEcCCCccEEEEEecCCCcHHHHHHhCCC--CCCHHHHH
Confidence            99999999999999999999999997654  46676665

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.52  E-value=2.3e-14  Score=152.95  Aligned_cols=95  Identities=36%  Similarity=0.648  Sum_probs=83.8

Q ss_pred             hhccccccceecccCceeEEEEEcCC--C----cEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCce
Q 013018          344 ATNNFSTDNKLGEGGFGEVYKGVLPS--G----QEIAVKRLSRS-SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEE  416 (451)
Q Consensus       344 ~~~~~~~~~~lG~G~fg~V~~~~l~~--g----~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~  416 (451)
                      +.++++..+.||+|.||.||+|.+.+  |    ..||||.+.+. +.++..+|++|..+|+++.|||||+++|+|....+
T Consensus       690 ~~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~  769 (1025)
T KOG1095|consen  690 PRKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGP  769 (1025)
T ss_pred             ChhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCC
Confidence            46677888999999999999999643  3    34899999876 45667899999999999999999999999999999


Q ss_pred             eeEEEeccCCCCHHHHHhccCC
Q 013018          417 KILVYEFVPNKSLDYFLYAQSP  438 (451)
Q Consensus       417 ~~lv~ey~~~GsL~~~L~~~~~  438 (451)
                      .+|++|||++|||..||++.++
T Consensus       770 ~~i~leyM~gGDL~sflr~~r~  791 (1025)
T KOG1095|consen  770 PLILLEYMEGGDLLSFLRESRP  791 (1025)
T ss_pred             cEEEehhcccCcHHHHHHhccc
Confidence            9999999999999999998754

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.50  E-value=1.8e-13  Score=153.23  Aligned_cols=95  Identities=26%  Similarity=0.481  Sum_probs=80.0

Q ss_pred             hccccccceecccCceeEEEEEc-CCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEec
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  423 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey  423 (451)
                      ...++..++||+|+||.||+|.. .++..||||++......    ...|++.+++++|||||+++|++...+..++||||
T Consensus       689 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~----~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey  764 (968)
T PLN00113        689 LSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI----PSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEY  764 (968)
T ss_pred             HhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc----cHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeC
Confidence            34567788999999999999995 67899999998654321    23468889999999999999999999999999999


Q ss_pred             cCCCCHHHHHhccCCCCCCchhhhhc
Q 013018          424 VPNKSLDYFLYAQSPKNNNNWIGQDA  449 (451)
Q Consensus       424 ~~~GsL~~~L~~~~~~~~l~W~~r~~  449 (451)
                      +++|+|.++++.      ++|.++.+
T Consensus       765 ~~~g~L~~~l~~------l~~~~~~~  784 (968)
T PLN00113        765 IEGKNLSEVLRN------LSWERRRK  784 (968)
T ss_pred             CCCCcHHHHHhc------CCHHHHHH
Confidence            999999999974      78887654

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.46  E-value=2.5e-14  Score=146.09  Aligned_cols=101  Identities=35%  Similarity=0.588  Sum_probs=83.8

Q ss_pred             ccccceecccCceeEEEEE-cCCCc----EEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEE
Q 013018          348 FSTDNKLGEGGFGEVYKGV-LPSGQ----EIAVKRLSRSS-GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  421 (451)
Q Consensus       348 ~~~~~~lG~G~fg~V~~~~-l~~g~----~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~  421 (451)
                      +...++||+|+||+||||. ++.|+    +||+|.+.... .+...++++|+..|.+++||||++|+|+|.... +.||+
T Consensus       698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvt  776 (1177)
T KOG1025|consen  698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVT  776 (1177)
T ss_pred             hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHH
Confidence            3557899999999999999 45554    68999997654 344589999999999999999999999998755 88999


Q ss_pred             eccCCCCHHHHHhccCCC----CCCchhhhhc
Q 013018          422 EFVPNKSLDYFLYAQSPK----NNNNWIGQDA  449 (451)
Q Consensus       422 ey~~~GsL~~~L~~~~~~----~~l~W~~r~~  449 (451)
                      +|||.|+|.+|++.++..    ..|+|-.+++
T Consensus       777 q~mP~G~LlDyvr~hr~~igsq~lLnw~~QIA  808 (1177)
T KOG1025|consen  777 QLMPLGCLLDYVREHRDNIGSQDLLNWCYQIA  808 (1177)
T ss_pred             HhcccchHHHHHHHhhccccHHHHHHHHHHHH
Confidence            999999999999987642    3478866554

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.46  E-value=4e-14  Score=140.57  Aligned_cols=99  Identities=30%  Similarity=0.513  Sum_probs=88.7

Q ss_pred             hHHHHHhhccccccceecccCceeEEEEEcCC-CcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCce
Q 013018          338 FETIEVATNNFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEE  416 (451)
Q Consensus       338 ~~~l~~~~~~~~~~~~lG~G~fg~V~~~~l~~-g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~  416 (451)
                      .++++..+.++...++||-|.||.||.|.|+. ...||||.|++.. ...++|+.|+.+|+.++|||+|+|+|+|....+
T Consensus       259 ~DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDt-MeveEFLkEAAvMKeikHpNLVqLLGVCT~EpP  337 (1157)
T KOG4278|consen  259 ADKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPP  337 (1157)
T ss_pred             cchhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcc-hhHHHHHHHHHHHHhhcCccHHHHhhhhccCCC
Confidence            46777777788889999999999999999754 6789999998663 456899999999999999999999999999999


Q ss_pred             eeEEEeccCCCCHHHHHhccC
Q 013018          417 KILVYEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       417 ~~lv~ey~~~GsL~~~L~~~~  437 (451)
                      .|||+|||.+|+|.+||++-.
T Consensus       338 FYIiTEfM~yGNLLdYLRecn  358 (1157)
T KOG4278|consen  338 FYIITEFMCYGNLLDYLRECN  358 (1157)
T ss_pred             eEEEEecccCccHHHHHHHhc
Confidence            999999999999999999743

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=99.33  E-value=3.1e-12  Score=122.10  Aligned_cols=93  Identities=25%  Similarity=0.426  Sum_probs=79.2

Q ss_pred             hccccccceecccCceeEEEEE-cCCCcEEEEEEeccCChh-------hHHHHHHHHHHHhcCCCCCcccceeEEEeCce
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQ-------GGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEE  416 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~~-------~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~  416 (451)
                      .+.+-..+.||+|+||.|-+|. .++|+.||||+++.....       ......+|+++|++|+|||||++.+++...+.
T Consensus       171 ~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds  250 (475)
T KOG0615|consen  171 NDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDS  250 (475)
T ss_pred             cceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCc
Confidence            3446678899999999999998 678999999999754211       11235799999999999999999999999999


Q ss_pred             eeEEEeccCCCCHHHHHhccC
Q 013018          417 KILVYEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       417 ~~lv~ey~~~GsL~~~L~~~~  437 (451)
                      .|||+||+++|+|.+++-.++
T Consensus       251 ~YmVlE~v~GGeLfd~vv~nk  271 (475)
T KOG0615|consen  251 SYMVLEYVEGGELFDKVVANK  271 (475)
T ss_pred             eEEEEEEecCccHHHHHHhcc
Confidence            999999999999999998754

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.31  E-value=2.7e-12  Score=125.35  Aligned_cols=90  Identities=26%  Similarity=0.458  Sum_probs=77.4

Q ss_pred             ccccccceecccCceeEEEEE-cCCCcEEEEEEeccCC--hhhHHHHHHHHHHHhcCCCCCcccceeEEEeC--ceeeEE
Q 013018          346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSS--GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEG--EEKILV  420 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~--~~~~lv  420 (451)
                      +.|+.+++||+|.||.|||++ +.+|..||+|++....  .....-..+||.+|++|.||||++|.+.....  ..+|||
T Consensus       117 ~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlV  196 (560)
T KOG0600|consen  117 DSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLV  196 (560)
T ss_pred             HHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEE
Confidence            446667899999999999999 7889999999997654  23346678999999999999999999999876  689999


Q ss_pred             EeccCCCCHHHHHhcc
Q 013018          421 YEFVPNKSLDYFLYAQ  436 (451)
Q Consensus       421 ~ey~~~GsL~~~L~~~  436 (451)
                      +|||++ ||.-++...
T Consensus       197 FeYMdh-DL~GLl~~p  211 (560)
T KOG0600|consen  197 FEYMDH-DLSGLLSSP  211 (560)
T ss_pred             Eecccc-hhhhhhcCC
Confidence            999988 888888764

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.30  E-value=7.1e-12  Score=125.20  Aligned_cols=92  Identities=25%  Similarity=0.442  Sum_probs=82.6

Q ss_pred             ccccccceecccCceeEEEEE-cCCCcEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEE
Q 013018          346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRS---SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  421 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~  421 (451)
                      ..|...+.||+|+|..+|+++ +..|+.+|+|++.+.   .....+...+||++.++|+|||||++++++.+.+++|||.
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL   97 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL   97 (592)
T ss_pred             ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence            357888999999999999999 589999999999764   3345678999999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhccC
Q 013018          422 EFVPNKSLDYFLYAQS  437 (451)
Q Consensus       422 ey~~~GsL~~~L~~~~  437 (451)
                      |+|++|+|.++++.++
T Consensus        98 ELC~~~sL~el~Krrk  113 (592)
T KOG0575|consen   98 ELCHRGSLMELLKRRK  113 (592)
T ss_pred             EecCCccHHHHHHhcC
Confidence            9999999999999544

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.30  E-value=5.4e-12  Score=119.36  Aligned_cols=99  Identities=38%  Similarity=0.614  Sum_probs=80.9

Q ss_pred             ccceecccCceeEEEEEcC-----CCcEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEec
Q 013018          350 TDNKLGEGGFGEVYKGVLP-----SGQEIAVKRLSRS-SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  423 (451)
Q Consensus       350 ~~~~lG~G~fg~V~~~~l~-----~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey  423 (451)
                      ..+.||.|.||.||+|.+.     .+..|+||.++.. ..+..++|.+|++.+.+++||||++++|++...++.++|+||
T Consensus         3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~   82 (259)
T PF07714_consen    3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEY   82 (259)
T ss_dssp             EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE-
T ss_pred             EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccc
Confidence            4678999999999999975     2568999999654 334468899999999999999999999999988889999999


Q ss_pred             cCCCCHHHHHhccCCCCCCchhhhhc
Q 013018          424 VPNKSLDYFLYAQSPKNNNNWIGQDA  449 (451)
Q Consensus       424 ~~~GsL~~~L~~~~~~~~l~W~~r~~  449 (451)
                      +++|+|.++|+.. ....++|.+++.
T Consensus        83 ~~~g~L~~~L~~~-~~~~~~~~~~~~  107 (259)
T PF07714_consen   83 CPGGSLDDYLKSK-NKEPLSEQQRLS  107 (259)
T ss_dssp             -TTEBHHHHHHHT-CTTTSBHHHHHH
T ss_pred             ccccccccccccc-cccccccccccc
Confidence            9999999999986 234477777654

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.27  E-value=1.5e-11  Score=116.70  Aligned_cols=102  Identities=25%  Similarity=0.423  Sum_probs=84.2

Q ss_pred             hccccccceecccCceeEEEEEcC----CCcEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeE
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGVLP----SGQEIAVKRLSRSS-GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKIL  419 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~l~----~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l  419 (451)
                      .++|+..+.||+|+||.||+|.+.    .+..||+|.++... ......|.+|+.++.+++||||+++.|++..++..++
T Consensus         4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l   83 (266)
T cd05064           4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMI   83 (266)
T ss_pred             hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEE
Confidence            356778899999999999999852    35689999987653 3334679999999999999999999999999999999


Q ss_pred             EEeccCCCCHHHHHhccCCCCCCchhhhh
Q 013018          420 VYEFVPNKSLDYFLYAQSPKNNNNWIGQD  448 (451)
Q Consensus       420 v~ey~~~GsL~~~L~~~~~~~~l~W~~r~  448 (451)
                      ||||+++|+|.+++....  ..++|.+.+
T Consensus        84 v~e~~~~~~L~~~l~~~~--~~l~~~~~~  110 (266)
T cd05064          84 VTEYMSNGALDSFLRKHE--GQLVAGQLM  110 (266)
T ss_pred             EEEeCCCCcHHHHHHhCC--CCCCHHHHH
Confidence            999999999999998643  246665543

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=99.23  E-value=1.4e-11  Score=111.33  Aligned_cols=90  Identities=27%  Similarity=0.547  Sum_probs=78.5

Q ss_pred             cccccceecccCceeEEEEE-cCCCcEEEEEEeccCChhh--HHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEec
Q 013018          347 NFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQG--GQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  423 (451)
Q Consensus       347 ~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey  423 (451)
                      +|...++||+|.||.||+|. ...|+.||||+++.....+  ....++|++.|+.++|+||+.|+.++-..+.+.||+||
T Consensus         3 rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfEf   82 (318)
T KOG0659|consen    3 RYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFEF   82 (318)
T ss_pred             hhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEEe
Confidence            46667899999999999999 7789999999997653222  35689999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhccC
Q 013018          424 VPNKSLDYFLYAQS  437 (451)
Q Consensus       424 ~~~GsL~~~L~~~~  437 (451)
                      |+. +|+..++++.
T Consensus        83 m~t-dLe~vIkd~~   95 (318)
T KOG0659|consen   83 MPT-DLEVVIKDKN   95 (318)
T ss_pred             ccc-cHHHHhcccc
Confidence            977 9999999754

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.23  E-value=1.9e-11  Score=122.98  Aligned_cols=98  Identities=26%  Similarity=0.400  Sum_probs=82.2

Q ss_pred             HHHHhhccccccceecccCceeEEEEEcC------CCcEEEEEEeccCC-hhhHHHHHHHHHHHhcCC-CCCcccceeEE
Q 013018          340 TIEVATNNFSTDNKLGEGGFGEVYKGVLP------SGQEIAVKRLSRSS-GQGGQEFKNEVVLVAKLQ-HRNLVRLLGFC  411 (451)
Q Consensus       340 ~l~~~~~~~~~~~~lG~G~fg~V~~~~l~------~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~-h~niv~l~g~~  411 (451)
                      .++...++|...++||+|+||.||+|...      .+..||||++.... ....+.|.+|+.++.++. ||||++++|++
T Consensus        31 ~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~  110 (400)
T cd05105          31 RWEFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGAC  110 (400)
T ss_pred             ceeccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEE
Confidence            44556778888999999999999999841      23479999997543 333467999999999996 99999999999


Q ss_pred             EeCceeeEEEeccCCCCHHHHHhccC
Q 013018          412 LEGEEKILVYEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       412 ~~~~~~~lv~ey~~~GsL~~~L~~~~  437 (451)
                      ...+..+|||||+++|+|.++|+.++
T Consensus       111 ~~~~~~~lv~Ey~~~g~L~~~l~~~~  136 (400)
T cd05105         111 TKSGPIYIITEYCFYGDLVNYLHKNR  136 (400)
T ss_pred             ccCCceEEEEEecCCCcHHHHHHHhh
Confidence            99899999999999999999998653

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.21  E-value=9.7e-12  Score=110.84  Aligned_cols=93  Identities=28%  Similarity=0.445  Sum_probs=80.9

Q ss_pred             hccccccceecccCceeEEEEE-cCCCcEEEEEEeccCC---hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEE
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSS---GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILV  420 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv  420 (451)
                      .++|...+.||+|.||.||.+. -+++-.||+|.+.+..   .+..+.+.+|+++-+.|+||||++++|++++....||+
T Consensus        21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLi  100 (281)
T KOG0580|consen   21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLI  100 (281)
T ss_pred             hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEE
Confidence            3567888999999999999999 4567899999996542   22346799999999999999999999999999999999


Q ss_pred             EeccCCCCHHHHHhccC
Q 013018          421 YEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       421 ~ey~~~GsL~~~L~~~~  437 (451)
                      +||.+.|+|...|++.+
T Consensus       101 lEya~~gel~k~L~~~~  117 (281)
T KOG0580|consen  101 LEYAPRGELYKDLQEGR  117 (281)
T ss_pred             EEecCCchHHHHHHhcc
Confidence            99999999999999543

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.20  E-value=2.3e-11  Score=121.59  Aligned_cols=97  Identities=29%  Similarity=0.437  Sum_probs=81.5

Q ss_pred             HHHhhccccccceecccCceeEEEEEc------CCCcEEEEEEeccCC-hhhHHHHHHHHHHHhcC-CCCCcccceeEEE
Q 013018          341 IEVATNNFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRLSRSS-GQGGQEFKNEVVLVAKL-QHRNLVRLLGFCL  412 (451)
Q Consensus       341 l~~~~~~~~~~~~lG~G~fg~V~~~~l------~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~  412 (451)
                      ++...++|...+.||+|+||.||++..      ..+..||||+++... ....+.+.+|+.++..+ +||||++++|.+.
T Consensus        30 ~~~~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~  109 (375)
T cd05104          30 WEFPRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACT  109 (375)
T ss_pred             cccchHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeec
Confidence            344556788899999999999999973      235689999997542 33456789999999999 8999999999999


Q ss_pred             eCceeeEEEeccCCCCHHHHHhccC
Q 013018          413 EGEEKILVYEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       413 ~~~~~~lv~ey~~~GsL~~~L~~~~  437 (451)
                      ..+..++||||+++|+|.++|+..+
T Consensus       110 ~~~~~~lv~E~~~~g~L~~~l~~~~  134 (375)
T cd05104         110 VGGPTLVITEYCCYGDLLNFLRRKR  134 (375)
T ss_pred             cCCcceeeehhccCCcHHHHHHhcc
Confidence            9999999999999999999998644

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>PHA02988 hypothetical protein; Provisional

Probab=99.20  E-value=6.6e-11  Score=113.52  Aligned_cols=94  Identities=15%  Similarity=0.296  Sum_probs=78.0

Q ss_pred             cceecccCceeEEEEEcCCCcEEEEEEeccCChhh---HHHHHHHHHHHhcCCCCCcccceeEEEe----CceeeEEEec
Q 013018          351 DNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQG---GQEFKNEVVLVAKLQHRNLVRLLGFCLE----GEEKILVYEF  423 (451)
Q Consensus       351 ~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~~~~---~~~~~~E~~~l~~l~h~niv~l~g~~~~----~~~~~lv~ey  423 (451)
                      ...||+|++|.||+|.+ +|+.||||.+.......   .+.|.+|+.+|.+++||||++++|++..    ....++|+||
T Consensus        25 ~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey  103 (283)
T PHA02988         25 SVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEY  103 (283)
T ss_pred             CeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEe
Confidence            46899999999999998 78999999997543222   4678899999999999999999999876    3467899999


Q ss_pred             cCCCCHHHHHhccCCCCCCchhhhh
Q 013018          424 VPNKSLDYFLYAQSPKNNNNWIGQD  448 (451)
Q Consensus       424 ~~~GsL~~~L~~~~~~~~l~W~~r~  448 (451)
                      +++|+|.++|+..+   .++|.+++
T Consensus       104 ~~~g~L~~~l~~~~---~~~~~~~~  125 (283)
T PHA02988        104 CTRGYLREVLDKEK---DLSFKTKL  125 (283)
T ss_pred             CCCCcHHHHHhhCC---CCChhHHH
Confidence            99999999998643   36665544

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.20  E-value=8e-11  Score=111.68  Aligned_cols=96  Identities=29%  Similarity=0.383  Sum_probs=85.2

Q ss_pred             HHHhhccccccceecccCceeEEEEE-cCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeE
Q 013018          341 IEVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKIL  419 (451)
Q Consensus       341 l~~~~~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l  419 (451)
                      ++.+++++.....||+|+||.||+|. ..++..|++|.+........+.+.+|+.++++++|+||+++++++..++..++
T Consensus         3 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l   82 (268)
T cd06624           3 YEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKI   82 (268)
T ss_pred             cccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEE
Confidence            45667777778899999999999999 45678899999877666666789999999999999999999999999999999


Q ss_pred             EEeccCCCCHHHHHhcc
Q 013018          420 VYEFVPNKSLDYFLYAQ  436 (451)
Q Consensus       420 v~ey~~~GsL~~~L~~~  436 (451)
                      ++||+++++|.++++..
T Consensus        83 v~e~~~~~~L~~~l~~~   99 (268)
T cd06624          83 FMEQVPGGSLSALLRSK   99 (268)
T ss_pred             EEecCCCCCHHHHHHHh
Confidence            99999999999999864

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.20  E-value=5.6e-11  Score=111.94  Aligned_cols=99  Identities=25%  Similarity=0.388  Sum_probs=83.3

Q ss_pred             ccccccceecccCceeEEEEEcCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEeccC
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVP  425 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~~  425 (451)
                      ++|+..+.||+|+||.||++.+.++..+++|.+.... ...++|.+|+.++++++||||+++++++...+..+++|||++
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~   82 (256)
T cd05114           4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGA-MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFME   82 (256)
T ss_pred             HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCC-ccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCC
Confidence            4567788999999999999998788899999886432 234679999999999999999999999999899999999999


Q ss_pred             CCCHHHHHhccCCCCCCchhhh
Q 013018          426 NKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       426 ~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                      +|+|.++++....  .++|...
T Consensus        83 ~~~L~~~~~~~~~--~~~~~~~  102 (256)
T cd05114          83 NGCLLNYLRQRQG--KLSKDML  102 (256)
T ss_pred             CCcHHHHHHhCcc--CCCHHHH
Confidence            9999999986432  3566543

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.20  E-value=3e-11  Score=115.24  Aligned_cols=86  Identities=29%  Similarity=0.460  Sum_probs=72.4

Q ss_pred             eecccCceeEEEEEcCC-------------------------CcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccc
Q 013018          353 KLGEGGFGEVYKGVLPS-------------------------GQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRL  407 (451)
Q Consensus       353 ~lG~G~fg~V~~~~l~~-------------------------g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l  407 (451)
                      .||+|+||.||+|.+..                         ...|++|.+.........+|.+|+.++++++||||+++
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~   81 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV   81 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence            68999999999997421                         13588998875544445689999999999999999999


Q ss_pred             eeEEEeCceeeEEEeccCCCCHHHHHhccCC
Q 013018          408 LGFCLEGEEKILVYEFVPNKSLDYFLYAQSP  438 (451)
Q Consensus       408 ~g~~~~~~~~~lv~ey~~~GsL~~~L~~~~~  438 (451)
                      +|++......++||||+++|+|..+++...+
T Consensus        82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~  112 (274)
T cd05076          82 HGVCVRGSENIMVEEFVEHGPLDVCLRKEKG  112 (274)
T ss_pred             EEEEEeCCceEEEEecCCCCcHHHHHHhcCC
Confidence            9999999999999999999999999986443

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=99.20  E-value=2.8e-11  Score=120.84  Aligned_cols=98  Identities=28%  Similarity=0.568  Sum_probs=82.4

Q ss_pred             HHHHhhccccccceecccCceeEEEEEcCC---Cc--EEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCcccceeEEEe
Q 013018          340 TIEVATNNFSTDNKLGEGGFGEVYKGVLPS---GQ--EIAVKRLSRS-SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLE  413 (451)
Q Consensus       340 ~l~~~~~~~~~~~~lG~G~fg~V~~~~l~~---g~--~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~  413 (451)
                      ++++.++.+...+.||+|.||.||+|.+.+   |+  .||||.-+.+ .....+.|+.|..+|++++||||++|+|+|..
T Consensus       383 nyel~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e  462 (974)
T KOG4257|consen  383 NYELRRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE  462 (974)
T ss_pred             cceeehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec
Confidence            456667777888999999999999999533   33  5788987763 44557889999999999999999999999965


Q ss_pred             CceeeEEEeccCCCCHHHHHhccCC
Q 013018          414 GEEKILVYEFVPNKSLDYFLYAQSP  438 (451)
Q Consensus       414 ~~~~~lv~ey~~~GsL~~~L~~~~~  438 (451)
                       .+.|||||.++.|.|.+||+.++.
T Consensus       463 -~P~WivmEL~~~GELr~yLq~nk~  486 (974)
T KOG4257|consen  463 -QPMWIVMELAPLGELREYLQQNKD  486 (974)
T ss_pred             -cceeEEEecccchhHHHHHHhccc
Confidence             678999999999999999997654

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=99.20  E-value=2e-11  Score=121.75  Aligned_cols=98  Identities=30%  Similarity=0.535  Sum_probs=85.6

Q ss_pred             ChHHHHHhhccccccceecccCceeEEEEEcCCCcEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeC
Q 013018          337 DFETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRS--SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEG  414 (451)
Q Consensus       337 ~~~~l~~~~~~~~~~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~  414 (451)
                      ..+++++..+.+...+.||+|+||+||+|.+ .| .||||.++..  ..+..+.|.+|+..+++-+|.||+-+.|+|..+
T Consensus       383 s~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~w-hG-dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p  460 (678)
T KOG0193|consen  383 SLEEWEIPPEEVLLGERIGSGSFGTVYRGRW-HG-DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNP  460 (678)
T ss_pred             cccccccCHHHhhccceeccccccceeeccc-cc-ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCC
Confidence            3467777778888899999999999999998 44 5999999754  445568999999999999999999999999887


Q ss_pred             ceeeEEEeccCCCCHHHHHhccC
Q 013018          415 EEKILVYEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       415 ~~~~lv~ey~~~GsL~~~L~~~~  437 (451)
                      +. .||+.+|++.+|+.+||..+
T Consensus       461 ~~-AIiTqwCeGsSLY~hlHv~e  482 (678)
T KOG0193|consen  461 PL-AIITQWCEGSSLYTHLHVQE  482 (678)
T ss_pred             ce-eeeehhccCchhhhhccchh
Confidence            66 99999999999999999755

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.19  E-value=3.6e-11  Score=113.46  Aligned_cols=105  Identities=28%  Similarity=0.435  Sum_probs=89.5

Q ss_pred             HhhccccccceecccCceeEEEEEcCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEe
Q 013018          343 VATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  422 (451)
Q Consensus       343 ~~~~~~~~~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  422 (451)
                      .+..+|+..++||+|+||.||++...++..+++|.+.........++.+|+.++.+++|+||+++++++...+..++|+|
T Consensus         3 ~~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e   82 (261)
T cd05148           3 RPREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITE   82 (261)
T ss_pred             CcHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEe
Confidence            34456788899999999999999987789999999977655556789999999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhccCCCCCCchhhhh
Q 013018          423 FVPNKSLDYFLYAQSPKNNNNWIGQD  448 (451)
Q Consensus       423 y~~~GsL~~~L~~~~~~~~l~W~~r~  448 (451)
                      |+++|+|.+++++... ..++|.+.+
T Consensus        83 ~~~~~~L~~~~~~~~~-~~~~~~~~~  107 (261)
T cd05148          83 LMEKGSLLAFLRSPEG-QVLPVASLI  107 (261)
T ss_pred             ecccCCHHHHHhcCCC-CCCCHHHHH
Confidence            9999999999987543 346666543

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.19  E-value=1.5e-12  Score=118.55  Aligned_cols=91  Identities=27%  Similarity=0.475  Sum_probs=77.1

Q ss_pred             cccccceecccCceeEEEEE-cCCCcEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCcccceeEE-EeCce-eeEEE
Q 013018          347 NFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRS--SGQGGQEFKNEVVLVAKLQHRNLVRLLGFC-LEGEE-KILVY  421 (451)
Q Consensus       347 ~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~-~~~~~-~~lv~  421 (451)
                      +|.+.++||+|.||.|||+. +.+|..+|.|.++-.  ..+..+.+..|+.+|++|+|||||++++.. ....+ +.|||
T Consensus        20 ~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivm   99 (375)
T KOG0591|consen   20 DYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVM   99 (375)
T ss_pred             HHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHH
Confidence            45667899999999999999 779999999998733  445567899999999999999999999844 34444 78999


Q ss_pred             eccCCCCHHHHHhccC
Q 013018          422 EFVPNKSLDYFLYAQS  437 (451)
Q Consensus       422 ey~~~GsL~~~L~~~~  437 (451)
                      ||+..|||.+.++.-+
T Consensus       100 E~c~~GDLsqmIk~~K  115 (375)
T KOG0591|consen  100 ELCDAGDLSQMIKHFK  115 (375)
T ss_pred             HhhcccCHHHHHHHHH
Confidence            9999999999998644

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.19  E-value=1e-10  Score=113.22  Aligned_cols=92  Identities=30%  Similarity=0.537  Sum_probs=77.9

Q ss_pred             hccccccceecccCceeEEEEEcCC-----------------CcEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCccc
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGVLPS-----------------GQEIAVKRLSRSS-GQGGQEFKNEVVLVAKLQHRNLVR  406 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~l~~-----------------g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~  406 (451)
                      .++|...++||+|+||.||++...+                 +..||+|.+.... .....+|.+|+.++.+++||||++
T Consensus         4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~   83 (304)
T cd05096           4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIR   83 (304)
T ss_pred             hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeE
Confidence            3467778999999999999997432                 3469999987643 334568999999999999999999


Q ss_pred             ceeEEEeCceeeEEEeccCCCCHHHHHhcc
Q 013018          407 LLGFCLEGEEKILVYEFVPNKSLDYFLYAQ  436 (451)
Q Consensus       407 l~g~~~~~~~~~lv~ey~~~GsL~~~L~~~  436 (451)
                      ++|++...+..+||+||+++|+|.++|...
T Consensus        84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  113 (304)
T cd05096          84 LLGVCVDEDPLCMITEYMENGDLNQFLSSH  113 (304)
T ss_pred             EEEEEecCCceEEEEecCCCCcHHHHHHhc
Confidence            999999988999999999999999999753

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=99.19  E-value=9.2e-12  Score=122.99  Aligned_cols=102  Identities=25%  Similarity=0.407  Sum_probs=84.8

Q ss_pred             HHHHhhccccccceecccCceeEEEEEcCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeE
Q 013018          340 TIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKIL  419 (451)
Q Consensus       340 ~l~~~~~~~~~~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l  419 (451)
                      .++++.+.+..++-||.|+-|.||.|++ .++.||||+++...       ..+|+.|++|+|+||+.|.|+|....-.+|
T Consensus       118 ~WeiPFe~IsELeWlGSGaQGAVF~Grl-~netVAVKKV~elk-------ETdIKHLRkLkH~NII~FkGVCtqsPcyCI  189 (904)
T KOG4721|consen  118 LWEIPFEEISELEWLGSGAQGAVFLGRL-HNETVAVKKVRELK-------ETDIKHLRKLKHPNIITFKGVCTQSPCYCI  189 (904)
T ss_pred             hccCCHHHhhhhhhhccCcccceeeeec-cCceehhHHHhhhh-------hhhHHHHHhccCcceeeEeeeecCCceeEE
Confidence            3455555566788999999999999999 77899999886432       357888999999999999999999999999


Q ss_pred             EEeccCCCCHHHHHhccCCCC---CCchhhhhc
Q 013018          420 VYEFVPNKSLDYFLYAQSPKN---NNNWIGQDA  449 (451)
Q Consensus       420 v~ey~~~GsL~~~L~~~~~~~---~l~W~~r~~  449 (451)
                      |||||+.|-|.+.|+..+.-.   ..+|.+.++
T Consensus       190 iMEfCa~GqL~~VLka~~~itp~llv~Wsk~IA  222 (904)
T KOG4721|consen  190 IMEFCAQGQLYEVLKAGRPITPSLLVDWSKGIA  222 (904)
T ss_pred             eeeccccccHHHHHhccCccCHHHHHHHHHHhh
Confidence            999999999999999866422   358977654

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.18  E-value=3.9e-11  Score=120.77  Aligned_cols=97  Identities=28%  Similarity=0.457  Sum_probs=82.2

Q ss_pred             HHHhhccccccceecccCceeEEEEEcC------CCcEEEEEEeccCC-hhhHHHHHHHHHHHhcCC-CCCcccceeEEE
Q 013018          341 IEVATNNFSTDNKLGEGGFGEVYKGVLP------SGQEIAVKRLSRSS-GQGGQEFKNEVVLVAKLQ-HRNLVRLLGFCL  412 (451)
Q Consensus       341 l~~~~~~~~~~~~lG~G~fg~V~~~~l~------~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~  412 (451)
                      ++.+.+++...++||+|+||.||++...      .+..||||++.... ....+.+.+|+.+|.++. ||||++++|.+.
T Consensus        32 ~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~  111 (401)
T cd05107          32 WEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACT  111 (401)
T ss_pred             ceecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEc
Confidence            4556667888899999999999999853      34689999997542 233457999999999997 999999999999


Q ss_pred             eCceeeEEEeccCCCCHHHHHhccC
Q 013018          413 EGEEKILVYEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       413 ~~~~~~lv~ey~~~GsL~~~L~~~~  437 (451)
                      ..+..++|+||+++|+|.++|+..+
T Consensus       112 ~~~~~~iv~E~~~~g~L~~~l~~~~  136 (401)
T cd05107         112 KGGPIYIITEYCRYGDLVDYLHRNK  136 (401)
T ss_pred             cCCCcEEEEeccCCCcHHHHHHhcc
Confidence            9889999999999999999998654

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.17  E-value=8.2e-11  Score=111.14  Aligned_cols=104  Identities=26%  Similarity=0.382  Sum_probs=87.6

Q ss_pred             HhhccccccceecccCceeEEEEEcCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEe
Q 013018          343 VATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  422 (451)
Q Consensus       343 ~~~~~~~~~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  422 (451)
                      ...++|+..+.||+|++|.||++...++..|++|.+.... ...+++.+|+.++++++|+||+++.+++...+..++++|
T Consensus         3 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   81 (261)
T cd05068           3 IDRTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTE   81 (261)
T ss_pred             cchhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeee
Confidence            3456688889999999999999998778889999986543 235679999999999999999999999998889999999


Q ss_pred             ccCCCCHHHHHhccCCCCCCchhhhh
Q 013018          423 FVPNKSLDYFLYAQSPKNNNNWIGQD  448 (451)
Q Consensus       423 y~~~GsL~~~L~~~~~~~~l~W~~r~  448 (451)
                      |+++++|.++++... ...++|.+.+
T Consensus        82 ~~~~~~L~~~~~~~~-~~~~~~~~~~  106 (261)
T cd05068          82 LMKYGSLLEYLQGGA-GRALKLPQLI  106 (261)
T ss_pred             cccCCcHHHHHhccC-CCCCCHHHHH
Confidence            999999999998754 3346776544

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.17  E-value=4.1e-11  Score=117.91  Aligned_cols=96  Identities=27%  Similarity=0.466  Sum_probs=78.9

Q ss_pred             HHhhccccccceecccCceeEEEEEc------CCCcEEEEEEeccCC-hhhHHHHHHHHHHHhcC-CCCCcccceeEEEe
Q 013018          342 EVATNNFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRLSRSS-GQGGQEFKNEVVLVAKL-QHRNLVRLLGFCLE  413 (451)
Q Consensus       342 ~~~~~~~~~~~~lG~G~fg~V~~~~l------~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~  413 (451)
                      +++.++|...++||+|+||.||++..      ..+..||||++.... ......+.+|+.++.++ +||||++++|.+..
T Consensus         3 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~   82 (338)
T cd05102           3 EFPRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTK   82 (338)
T ss_pred             ccchhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecC
Confidence            34567788899999999999999973      234679999997543 23346799999999999 89999999998876


Q ss_pred             C-ceeeEEEeccCCCCHHHHHhccC
Q 013018          414 G-EEKILVYEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       414 ~-~~~~lv~ey~~~GsL~~~L~~~~  437 (451)
                      . ...+++|||+++|+|.++|+..+
T Consensus        83 ~~~~~~lv~ey~~~g~L~~~l~~~~  107 (338)
T cd05102          83 PNGPLMVIVEFCKYGNLSNFLRAKR  107 (338)
T ss_pred             CCCceEEEEecCCCCcHHHHHHhcc
Confidence            4 46789999999999999998643

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.16  E-value=1.3e-10  Score=114.28  Aligned_cols=93  Identities=23%  Similarity=0.265  Sum_probs=80.7

Q ss_pred             hccccccceecccCceeEEEEEc-CCCcEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEe
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSS-GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  422 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  422 (451)
                      .++|+..++||+|+||.||++.. ..+..+++|.+.... ....+.+.+|+.++.+++|+||+++++++...+..+||||
T Consensus         4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   83 (333)
T cd06650           4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME   83 (333)
T ss_pred             hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEe
Confidence            46788889999999999999995 467889999887542 3334679999999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhccC
Q 013018          423 FVPNKSLDYFLYAQS  437 (451)
Q Consensus       423 y~~~GsL~~~L~~~~  437 (451)
                      |+++|+|.++|+...
T Consensus        84 ~~~~~~L~~~l~~~~   98 (333)
T cd06650          84 HMDGGSLDQVLKKAG   98 (333)
T ss_pred             cCCCCcHHHHHHHcC
Confidence            999999999998643

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.16  E-value=1.3e-10  Score=116.49  Aligned_cols=91  Identities=21%  Similarity=0.293  Sum_probs=79.3

Q ss_pred             cccccceecccCceeEEEEE-cCCCcEEEEEEeccCC---hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEe
Q 013018          347 NFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSS---GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  422 (451)
Q Consensus       347 ~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  422 (451)
                      .|...+.||+|+||.||++. ...++.+|||.+....   ....+.+.+|+.++.+++|+||+++++.+...+..++|||
T Consensus         2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E   81 (381)
T cd05626           2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD   81 (381)
T ss_pred             CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence            46778999999999999998 5678899999996532   2334678999999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhccC
Q 013018          423 FVPNKSLDYFLYAQS  437 (451)
Q Consensus       423 y~~~GsL~~~L~~~~  437 (451)
                      |+++|+|.+++....
T Consensus        82 ~~~gg~L~~~l~~~~   96 (381)
T cd05626          82 YIPGGDMMSLLIRME   96 (381)
T ss_pred             cCCCCcHHHHHHhcC
Confidence            999999999998643

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.16  E-value=1.6e-10  Score=109.48  Aligned_cols=102  Identities=25%  Similarity=0.424  Sum_probs=84.1

Q ss_pred             hccccccceecccCceeEEEEEcCC----CcEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeE
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGVLPS----GQEIAVKRLSRSS-GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKIL  419 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~l~~----g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l  419 (451)
                      .++|+..+.||+|+||.||+|.+..    ...|+||.+.... .....+|.+|+.++.+++||||+++++.+...+..++
T Consensus         3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~i   82 (266)
T cd05033           3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMI   82 (266)
T ss_pred             hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEE
Confidence            3567888999999999999998632    3579999887543 3345689999999999999999999999998889999


Q ss_pred             EEeccCCCCHHHHHhccCCCCCCchhhhh
Q 013018          420 VYEFVPNKSLDYFLYAQSPKNNNNWIGQD  448 (451)
Q Consensus       420 v~ey~~~GsL~~~L~~~~~~~~l~W~~r~  448 (451)
                      ++||+++|+|.+++.....  .++|.+.+
T Consensus        83 v~e~~~~~~L~~~~~~~~~--~~~~~~~~  109 (266)
T cd05033          83 ITEYMENGSLDKFLRENDG--KFTVGQLV  109 (266)
T ss_pred             EEEcCCCCCHHHHHHhccC--CCCHHHHH
Confidence            9999999999999986443  46666543

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.15  E-value=1e-10  Score=110.43  Aligned_cols=102  Identities=29%  Similarity=0.394  Sum_probs=85.5

Q ss_pred             hhccccccceecccCceeEEEEEcCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEec
Q 013018          344 ATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  423 (451)
Q Consensus       344 ~~~~~~~~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey  423 (451)
                      ..++|+..++||+|+||.||++...++..|++|.+.... ...+.+.+|+.++++++|+||+++++.+...+..++++||
T Consensus         4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   82 (261)
T cd05072           4 PRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEY   82 (261)
T ss_pred             chHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEec
Confidence            345678889999999999999998788899999886543 2357899999999999999999999999888899999999


Q ss_pred             cCCCCHHHHHhccCCCCCCchhhh
Q 013018          424 VPNKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       424 ~~~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                      +++|+|.++++.... ..++|.++
T Consensus        83 ~~~~~L~~~l~~~~~-~~~~~~~~  105 (261)
T cd05072          83 MAKGSLLDFLKSDEG-GKVLLPKL  105 (261)
T ss_pred             CCCCcHHHHHHHhcC-CCCCHHHH
Confidence            999999999986432 33555544

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=99.15  E-value=2.5e-11  Score=115.54  Aligned_cols=92  Identities=18%  Similarity=0.427  Sum_probs=80.7

Q ss_pred             cccccceecccCceeEEEEE-cCCCcEEEEEEeccCC---hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEe
Q 013018          347 NFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSS---GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  422 (451)
Q Consensus       347 ~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  422 (451)
                      +|.+.+.||+|.||.|-++. ...|+.||||.++...   .++.-.+.+|+++|+.|+||||+.++.++...+.+.||||
T Consensus        54 RyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivME  133 (668)
T KOG0611|consen   54 RYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVME  133 (668)
T ss_pred             HHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEEE
Confidence            35667899999999999998 5789999999997653   3444568899999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhccCC
Q 013018          423 FVPNKSLDYFLYAQSP  438 (451)
Q Consensus       423 y~~~GsL~~~L~~~~~  438 (451)
                      |..+|.|.+|+.+++.
T Consensus       134 YaS~GeLYDYiSer~~  149 (668)
T KOG0611|consen  134 YASGGELYDYISERGS  149 (668)
T ss_pred             ecCCccHHHHHHHhcc
Confidence            9999999999997653

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.14  E-value=1.3e-10  Score=111.84  Aligned_cols=91  Identities=21%  Similarity=0.236  Sum_probs=78.6

Q ss_pred             cccccceecccCceeEEEEEc-CCCcEEEEEEeccCC---hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEe
Q 013018          347 NFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSS---GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  422 (451)
Q Consensus       347 ~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  422 (451)
                      +|+..+.||+|+||.||++.. .+++.+|+|.+....   .+..+.+.+|+.++++++||||+++++.+......++|||
T Consensus         2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   81 (291)
T cd05612           2 DLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLME   81 (291)
T ss_pred             CceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEEe
Confidence            577789999999999999995 468899999986432   2234678899999999999999999999988889999999


Q ss_pred             ccCCCCHHHHHhccC
Q 013018          423 FVPNKSLDYFLYAQS  437 (451)
Q Consensus       423 y~~~GsL~~~L~~~~  437 (451)
                      |+++|+|.++++..+
T Consensus        82 ~~~~~~L~~~~~~~~   96 (291)
T cd05612          82 YVPGGELFSYLRNSG   96 (291)
T ss_pred             CCCCCCHHHHHHHcC
Confidence            999999999998654

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.14  E-value=1.4e-10  Score=115.35  Aligned_cols=92  Identities=22%  Similarity=0.333  Sum_probs=79.4

Q ss_pred             ccccccceecccCceeEEEEEc-CCCcEEEEEEeccCC---hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEE
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSS---GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  421 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~  421 (451)
                      ++|+..+.||+|+||.||++.. .+++.||||++....   ......+.+|+.++..++||||+++++.+...+..+|||
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~   80 (364)
T cd05599           1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM   80 (364)
T ss_pred             CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence            3577889999999999999994 568999999996431   233456889999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhccC
Q 013018          422 EFVPNKSLDYFLYAQS  437 (451)
Q Consensus       422 ey~~~GsL~~~L~~~~  437 (451)
                      ||+++|+|.++|+...
T Consensus        81 E~~~~g~L~~~l~~~~   96 (364)
T cd05599          81 EYLPGGDMMTLLMKKD   96 (364)
T ss_pred             CCCCCcHHHHHHHHcC
Confidence            9999999999998643

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.14  E-value=1.8e-10  Score=115.12  Aligned_cols=91  Identities=26%  Similarity=0.297  Sum_probs=78.8

Q ss_pred             cccccceecccCceeEEEEE-cCCCcEEEEEEeccCC---hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEe
Q 013018          347 NFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSS---GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  422 (451)
Q Consensus       347 ~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  422 (451)
                      +|...++||+|+||.||++. ..+++.||||.+....   .+..+.+.+|+.++.+++||||+++++.+......+||||
T Consensus         2 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~E   81 (377)
T cd05629           2 DFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIME   81 (377)
T ss_pred             CceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEEe
Confidence            57778999999999999998 5578999999986431   2234678899999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhccC
Q 013018          423 FVPNKSLDYFLYAQS  437 (451)
Q Consensus       423 y~~~GsL~~~L~~~~  437 (451)
                      |+++|+|.+++....
T Consensus        82 ~~~gg~L~~~l~~~~   96 (377)
T cd05629          82 FLPGGDLMTMLIKYD   96 (377)
T ss_pred             CCCCCcHHHHHHhcC
Confidence            999999999998643

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=99.13  E-value=4.1e-11  Score=110.27  Aligned_cols=89  Identities=26%  Similarity=0.383  Sum_probs=75.1

Q ss_pred             cccccceecccCceeEEEEE-cCCCcEEEEEEeccCCh-hh-HHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEec
Q 013018          347 NFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSG-QG-GQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  423 (451)
Q Consensus       347 ~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~-~~-~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey  423 (451)
                      .|+...++|+|+||.|||++ ...|+.||||++.+... .. .+-.++|+++|++++|+|+|.|+.++.....++||+||
T Consensus         3 kYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~   82 (396)
T KOG0593|consen    3 KYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEY   82 (396)
T ss_pred             HHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeee
Confidence            45667789999999999999 56799999999976533 22 35578999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhc
Q 013018          424 VPNKSLDYFLYA  435 (451)
Q Consensus       424 ~~~GsL~~~L~~  435 (451)
                      +++.-|+++-+.
T Consensus        83 ~dhTvL~eLe~~   94 (396)
T KOG0593|consen   83 CDHTVLHELERY   94 (396)
T ss_pred             cchHHHHHHHhc
Confidence            998766665543

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.13  E-value=1.8e-10  Score=108.61  Aligned_cols=100  Identities=26%  Similarity=0.380  Sum_probs=83.6

Q ss_pred             ccccccceecccCceeEEEEEcCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEeccC
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVP  425 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~~  425 (451)
                      ++|...+.||+|+||.||++...++..+|+|.+.... ...++|.+|+.++.+++||||+++++++...+..++++||++
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   82 (256)
T cd05113           4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMS   82 (256)
T ss_pred             HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCC
Confidence            3466778999999999999998777789999887543 234679999999999999999999999988888999999999


Q ss_pred             CCCHHHHHhccCCCCCCchhhhh
Q 013018          426 NKSLDYFLYAQSPKNNNNWIGQD  448 (451)
Q Consensus       426 ~GsL~~~L~~~~~~~~l~W~~r~  448 (451)
                      +|+|.++++....  .++|.+.+
T Consensus        83 ~~~l~~~i~~~~~--~~~~~~~~  103 (256)
T cd05113          83 NGCLLNYLREHGK--RFQPSQLL  103 (256)
T ss_pred             CCcHHHHHHhcCC--CCCHHHHH
Confidence            9999999986432  46666544

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.13  E-value=2.9e-10  Score=111.65  Aligned_cols=93  Identities=23%  Similarity=0.238  Sum_probs=80.9

Q ss_pred             hccccccceecccCceeEEEEEc-CCCcEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEe
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSS-GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  422 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  422 (451)
                      .++|+..+.||+|+||.||++.. ..+..+|+|.+.... ....+.+.+|++++.+++||||+++++++...+..++|||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   83 (331)
T cd06649           4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME   83 (331)
T ss_pred             cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEee
Confidence            45688889999999999999994 468889999987542 3334679999999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhccC
Q 013018          423 FVPNKSLDYFLYAQS  437 (451)
Q Consensus       423 y~~~GsL~~~L~~~~  437 (451)
                      |+++|+|.++++...
T Consensus        84 ~~~~~~L~~~l~~~~   98 (331)
T cd06649          84 HMDGGSLDQVLKEAK   98 (331)
T ss_pred             cCCCCcHHHHHHHcC
Confidence            999999999998643

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=99.13  E-value=1.6e-10  Score=109.34  Aligned_cols=90  Identities=23%  Similarity=0.284  Sum_probs=78.2

Q ss_pred             cccccceecccCceeEEEEE-cCCCcEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCc-eeeEEEec
Q 013018          347 NFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRS-SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGE-EKILVYEF  423 (451)
Q Consensus       347 ~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~-~~~lv~ey  423 (451)
                      ++...+.||+|..|.|||+. .++++.+|+|.+... .....+++.+|++++.+.+||+||+++|++.... ++.|+|||
T Consensus        80 dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEY  159 (364)
T KOG0581|consen   80 DLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEY  159 (364)
T ss_pred             HhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhh
Confidence            34557899999999999999 457889999999654 3344578999999999999999999999999988 59999999


Q ss_pred             cCCCCHHHHHhcc
Q 013018          424 VPNKSLDYFLYAQ  436 (451)
Q Consensus       424 ~~~GsL~~~L~~~  436 (451)
                      |.+|||+++++..
T Consensus       160 MDgGSLd~~~k~~  172 (364)
T KOG0581|consen  160 MDGGSLDDILKRV  172 (364)
T ss_pred             cCCCCHHHHHhhc
Confidence            9999999999964

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.12  E-value=3.9e-10  Score=106.82  Aligned_cols=92  Identities=25%  Similarity=0.426  Sum_probs=80.4

Q ss_pred             ccccccceecccCceeEEEEE-cCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEecc
Q 013018          346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFV  424 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~  424 (451)
                      ++|+..+.||+|+||.||+|. ..+++.+++|.+..........+.+|+.++.+++||||+++.+.+...+..++|+||+
T Consensus         9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~~   88 (267)
T cd06646           9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYC   88 (267)
T ss_pred             hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeCC
Confidence            457788999999999999999 4678899999997554444567889999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhccC
Q 013018          425 PNKSLDYFLYAQS  437 (451)
Q Consensus       425 ~~GsL~~~L~~~~  437 (451)
                      ++|+|.++++...
T Consensus        89 ~~~~L~~~~~~~~  101 (267)
T cd06646          89 GGGSLQDIYHVTG  101 (267)
T ss_pred             CCCcHHHHHHhcC
Confidence            9999999997543

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=99.12  E-value=5e-11  Score=117.90  Aligned_cols=91  Identities=26%  Similarity=0.398  Sum_probs=79.3

Q ss_pred             ccccccceecccCceeEEEEEc-CCCcEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEe
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRS--SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  422 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  422 (451)
                      ++|...+.||+|.||.||||+. .+.+.||+|.+.+.  ..++.+.+.+|++++++++||||+.++.++....++|+|+|
T Consensus         2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte   81 (808)
T KOG0597|consen    2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE   81 (808)
T ss_pred             cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence            4567788999999999999994 46789999999754  34456789999999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhccC
Q 013018          423 FVPNKSLDYFLYAQS  437 (451)
Q Consensus       423 y~~~GsL~~~L~~~~  437 (451)
                      |+.+ +|..+|....
T Consensus        82 ~a~g-~L~~il~~d~   95 (808)
T KOG0597|consen   82 YAVG-DLFTILEQDG   95 (808)
T ss_pred             hhhh-hHHHHHHhcc
Confidence            9966 9999998754

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.12  E-value=3.2e-10  Score=108.53  Aligned_cols=101  Identities=28%  Similarity=0.458  Sum_probs=82.9

Q ss_pred             ccccccceecccCceeEEEEEc-----CCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeC--ceee
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVL-----PSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEG--EEKI  418 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l-----~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~--~~~~  418 (451)
                      .+++..+.||+|+||.||++..     ..+..|++|.+........+.|.+|+.++.+++||||+++.+++...  ...+
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~   83 (284)
T cd05081           4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR   83 (284)
T ss_pred             ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence            3567789999999999999974     25789999999776655667899999999999999999999987643  4678


Q ss_pred             EEEeccCCCCHHHHHhccCCCCCCchhhhh
Q 013018          419 LVYEFVPNKSLDYFLYAQSPKNNNNWIGQD  448 (451)
Q Consensus       419 lv~ey~~~GsL~~~L~~~~~~~~l~W~~r~  448 (451)
                      +|+||+++|+|.+++...+  ..++|.++.
T Consensus        84 lv~e~~~~~~L~~~l~~~~--~~l~~~~~~  111 (284)
T cd05081          84 LVMEYLPYGSLRDYLQKHR--ERLDHRKLL  111 (284)
T ss_pred             EEEEecCCCCHHHHHHhcC--cCCCHHHHH
Confidence            9999999999999997543  246776543

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.12  E-value=2.4e-10  Score=114.54  Aligned_cols=91  Identities=22%  Similarity=0.295  Sum_probs=78.9

Q ss_pred             cccccceecccCceeEEEEE-cCCCcEEEEEEeccCC---hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEe
Q 013018          347 NFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSS---GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  422 (451)
Q Consensus       347 ~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  422 (451)
                      .|...++||+|+||.||++. ..+++.+|+|.+....   ......+.+|+.++++++|+||+++++.+...+..+||||
T Consensus         2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E   81 (382)
T cd05625           2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD   81 (382)
T ss_pred             CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence            46778999999999999998 4578899999986532   2234678899999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhccC
Q 013018          423 FVPNKSLDYFLYAQS  437 (451)
Q Consensus       423 y~~~GsL~~~L~~~~  437 (451)
                      |+++|+|.++|....
T Consensus        82 ~~~gg~L~~~l~~~~   96 (382)
T cd05625          82 YIPGGDMMSLLIRMG   96 (382)
T ss_pred             CCCCCcHHHHHHhcC
Confidence            999999999998643

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.11  E-value=2.8e-10  Score=110.45  Aligned_cols=90  Identities=23%  Similarity=0.251  Sum_probs=78.7

Q ss_pred             cccccceecccCceeEEEEE-cCCCcEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEecc
Q 013018          347 NFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRS-SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFV  424 (451)
Q Consensus       347 ~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~  424 (451)
                      +|+..+.||+|+||.||++. ..++..+++|.+... .......+.+|++++.+++||||+++++.+..++..++++||+
T Consensus         2 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey~   81 (308)
T cd06615           2 DFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEHM   81 (308)
T ss_pred             CceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeecc
Confidence            57788999999999999998 446788999988654 2333467899999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcc
Q 013018          425 PNKSLDYFLYAQ  436 (451)
Q Consensus       425 ~~GsL~~~L~~~  436 (451)
                      ++|+|.++++..
T Consensus        82 ~~~~L~~~l~~~   93 (308)
T cd06615          82 DGGSLDQVLKKA   93 (308)
T ss_pred             CCCcHHHHHHhc
Confidence            999999999864

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.11  E-value=3e-10  Score=111.55  Aligned_cols=91  Identities=24%  Similarity=0.382  Sum_probs=78.9

Q ss_pred             cccccceecccCceeEEEEEc-CCCcEEEEEEeccCC---hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEe
Q 013018          347 NFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSS---GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  422 (451)
Q Consensus       347 ~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  422 (451)
                      +|+..+.||+|+||.||++.. .+++.||||++....   ......+.+|+.++.+++||||+++++.+...+..+||||
T Consensus         2 ~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e   81 (333)
T cd05600           2 DFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAME   81 (333)
T ss_pred             CcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEEe
Confidence            577889999999999999995 468899999997542   2234678899999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhccC
Q 013018          423 FVPNKSLDYFLYAQS  437 (451)
Q Consensus       423 y~~~GsL~~~L~~~~  437 (451)
                      |+++|+|.++++...
T Consensus        82 ~~~g~~L~~~l~~~~   96 (333)
T cd05600          82 YVPGGDFRTLLNNLG   96 (333)
T ss_pred             CCCCCCHHHHHHHcC
Confidence            999999999997643

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.11  E-value=3.3e-10  Score=108.40  Aligned_cols=91  Identities=33%  Similarity=0.530  Sum_probs=77.9

Q ss_pred             ccccccceecccCceeEEEEEc-----CCCcEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeE
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVL-----PSGQEIAVKRLSRSS-GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKIL  419 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l-----~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l  419 (451)
                      ++|+..+.||+|+||.||+|..     ..+..+++|.+.... .+...++.+|+.++++++||||+++++.+...+..++
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l   84 (283)
T cd05090           5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM   84 (283)
T ss_pred             hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence            4567789999999999999983     245789999997543 3344679999999999999999999999998899999


Q ss_pred             EEeccCCCCHHHHHhcc
Q 013018          420 VYEFVPNKSLDYFLYAQ  436 (451)
Q Consensus       420 v~ey~~~GsL~~~L~~~  436 (451)
                      ++||+++|+|.+++..+
T Consensus        85 v~e~~~~~~L~~~l~~~  101 (283)
T cd05090          85 LFEYLNQGDLHEFLIMR  101 (283)
T ss_pred             EEEcCCCCcHHHHHHhc
Confidence            99999999999999754

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.11  E-value=2.7e-10  Score=111.80  Aligned_cols=92  Identities=23%  Similarity=0.316  Sum_probs=79.5

Q ss_pred             ccccccceecccCceeEEEEEc-CCCcEEEEEEeccCC---hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEE
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSS---GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  421 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~  421 (451)
                      ++|...+.||+|+||.||++.. .+++.+|+|.+....   ....+.+.+|+.++.+++||||+++++.+...+..++|+
T Consensus        18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   97 (329)
T PTZ00263         18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL   97 (329)
T ss_pred             hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence            4577789999999999999995 468899999986432   223467899999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhccC
Q 013018          422 EFVPNKSLDYFLYAQS  437 (451)
Q Consensus       422 ey~~~GsL~~~L~~~~  437 (451)
                      ||+++|+|.++|+...
T Consensus        98 e~~~~~~L~~~l~~~~  113 (329)
T PTZ00263         98 EFVVGGELFTHLRKAG  113 (329)
T ss_pred             cCCCCChHHHHHHHcC
Confidence            9999999999998643

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.11  E-value=2.3e-10  Score=109.17  Aligned_cols=95  Identities=26%  Similarity=0.533  Sum_probs=80.0

Q ss_pred             HhhccccccceecccCceeEEEEEcC------CCcEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCc
Q 013018          343 VATNNFSTDNKLGEGGFGEVYKGVLP------SGQEIAVKRLSRSS-GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGE  415 (451)
Q Consensus       343 ~~~~~~~~~~~lG~G~fg~V~~~~l~------~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~  415 (451)
                      ..+++|+..+.||+|+||.||++...      .+..+|||.+.... .....+|.+|+.++++++||||+++++++....
T Consensus         3 ~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~   82 (277)
T cd05062           3 VAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQ   82 (277)
T ss_pred             ccHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC
Confidence            35567888999999999999998742      24679999886432 234567999999999999999999999998888


Q ss_pred             eeeEEEeccCCCCHHHHHhccC
Q 013018          416 EKILVYEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       416 ~~~lv~ey~~~GsL~~~L~~~~  437 (451)
                      ..++|+||+++|+|.++++..+
T Consensus        83 ~~~lv~e~~~~~~L~~~~~~~~  104 (277)
T cd05062          83 PTLVIMELMTRGDLKSYLRSLR  104 (277)
T ss_pred             CeEEEEecCCCCCHHHHHHHcC
Confidence            9999999999999999998643

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.10  E-value=4.5e-10  Score=105.19  Aligned_cols=95  Identities=28%  Similarity=0.464  Sum_probs=80.3

Q ss_pred             ceecccCceeEEEEEcCCCcEEEEEEeccCCh-hhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEeccCCCCHH
Q 013018          352 NKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSG-QGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLD  430 (451)
Q Consensus       352 ~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~~~GsL~  430 (451)
                      ++||+|+||.||++...++..+++|.+..... .....+.+|+.++.+++||||+++++.+...+..++|+||+++|+|.
T Consensus         1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   80 (250)
T cd05085           1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL   80 (250)
T ss_pred             CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence            46899999999999987889999999876543 33457999999999999999999999999888999999999999999


Q ss_pred             HHHhccCCCCCCchhhhh
Q 013018          431 YFLYAQSPKNNNNWIGQD  448 (451)
Q Consensus       431 ~~L~~~~~~~~l~W~~r~  448 (451)
                      +++....  ..++|.+.+
T Consensus        81 ~~~~~~~--~~~~~~~~~   96 (250)
T cd05085          81 SFLRKKK--DELKTKQLV   96 (250)
T ss_pred             HHHHhcC--CCCCHHHHH
Confidence            9997643  235666544

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.10  E-value=3.2e-10  Score=106.91  Aligned_cols=103  Identities=29%  Similarity=0.458  Sum_probs=86.9

Q ss_pred             HhhccccccceecccCceeEEEEEcCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEe
Q 013018          343 VATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  422 (451)
Q Consensus       343 ~~~~~~~~~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  422 (451)
                      +..++|...++||+|+||.||++...++..++||.+.... ...+++.+|+.++++++|+|++++++.+......++++|
T Consensus         3 ~~~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e   81 (261)
T cd05034           3 IPRESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTE   81 (261)
T ss_pred             cchhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCc-cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEe
Confidence            4556788899999999999999998778889999987543 234689999999999999999999999988889999999


Q ss_pred             ccCCCCHHHHHhccCCCCCCchhhh
Q 013018          423 FVPNKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       423 y~~~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                      |+++++|.++++.... ..++|.+.
T Consensus        82 ~~~~~~L~~~i~~~~~-~~~~~~~~  105 (261)
T cd05034          82 YMSKGSLLDFLKSGEG-KKLRLPQL  105 (261)
T ss_pred             ccCCCCHHHHHhcccc-CCCCHHHH
Confidence            9999999999987432 34666554

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=99.10  E-value=2.4e-10  Score=112.68  Aligned_cols=106  Identities=21%  Similarity=0.324  Sum_probs=88.2

Q ss_pred             HHhhccccccceecccCceeEEEEE-cCCCcEEEEEEeccCC---hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCcee
Q 013018          342 EVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSS---GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEK  417 (451)
Q Consensus       342 ~~~~~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~  417 (451)
                      +...++|..+.+||+|+||.||.++ ...|...|+|+|++..   ..+.+..+.|-.+|....+|+||+|+-.+.+.+.+
T Consensus       137 r~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~L  216 (550)
T KOG0605|consen  137 RLSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYL  216 (550)
T ss_pred             cCCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCee
Confidence            3456789999999999999999999 5679999999998652   33456788999999999999999999888889999


Q ss_pred             eEEEeccCCCCHHHHHhccCCCCCCchhhhh
Q 013018          418 ILVYEFVPNKSLDYFLYAQSPKNNNNWIGQD  448 (451)
Q Consensus       418 ~lv~ey~~~GsL~~~L~~~~~~~~l~W~~r~  448 (451)
                      ||||||+|+||+-.+|..... -.-+|.+-|
T Consensus       217 YLiMEylPGGD~mTLL~~~~~-L~e~~arfY  246 (550)
T KOG0605|consen  217 YLIMEYLPGGDMMTLLMRKDT-LTEDWARFY  246 (550)
T ss_pred             EEEEEecCCccHHHHHHhcCc-CchHHHHHH
Confidence            999999999999999986432 124676544

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.10  E-value=3e-10  Score=108.10  Aligned_cols=103  Identities=31%  Similarity=0.491  Sum_probs=85.0

Q ss_pred             ccccccceecccCceeEEEEEcC------CCcEEEEEEeccCChh-hHHHHHHHHHHHhcCCCCCcccceeEEEeCceee
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVLP------SGQEIAVKRLSRSSGQ-GGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKI  418 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l~------~g~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~  418 (451)
                      ++|+....||+|+||.||++...      ....+++|.+.....+ ..+++.+|++++++++|+||+++++++...+..+
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   84 (275)
T cd05046           5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY   84 (275)
T ss_pred             HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence            56778899999999999999853      2457899988655433 3578999999999999999999999998888899


Q ss_pred             EEEeccCCCCHHHHHhccCCCC------CCchhhhh
Q 013018          419 LVYEFVPNKSLDYFLYAQSPKN------NNNWIGQD  448 (451)
Q Consensus       419 lv~ey~~~GsL~~~L~~~~~~~------~l~W~~r~  448 (451)
                      +|+||+++|+|.++++......      .++|.+++
T Consensus        85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~  120 (275)
T cd05046          85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKV  120 (275)
T ss_pred             EEEEecCCCcHHHHHHhcccccccccccCCCHHHHH
Confidence            9999999999999998755322      47777654

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.10  E-value=4.9e-11  Score=120.54  Aligned_cols=89  Identities=36%  Similarity=0.499  Sum_probs=77.3

Q ss_pred             ccccccceecccCceeEEEEEcC--CCc--EEEEEEeccCChh-hHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEE
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVLP--SGQ--EIAVKRLSRSSGQ-GGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILV  420 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l~--~g~--~vavK~l~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv  420 (451)
                      +.+...++||+|.||.|++|.|.  +|.  .||||.+...... ...+|++|+.+|.+|+|||+++|+|++.. .++.||
T Consensus       110 e~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV  188 (1039)
T KOG0199|consen  110 EQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMV  188 (1039)
T ss_pred             HHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHH
Confidence            34556789999999999999974  343  6899999866433 56899999999999999999999999987 778899


Q ss_pred             EeccCCCCHHHHHhc
Q 013018          421 YEFVPNKSLDYFLYA  435 (451)
Q Consensus       421 ~ey~~~GsL~~~L~~  435 (451)
                      +|+++.|+|.+-|++
T Consensus       189 ~ELaplGSLldrLrk  203 (1039)
T KOG0199|consen  189 FELAPLGSLLDRLRK  203 (1039)
T ss_pred             hhhcccchHHHHHhh
Confidence            999999999999998

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.09  E-value=3.7e-10  Score=112.86  Aligned_cols=91  Identities=20%  Similarity=0.291  Sum_probs=78.7

Q ss_pred             cccccceecccCceeEEEEE-cCCCcEEEEEEeccCC---hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEe
Q 013018          347 NFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSS---GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  422 (451)
Q Consensus       347 ~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  422 (451)
                      +|+..+.||+|+||.||++. ...++.+|||.+....   ......+.+|+.++.+++|+||+++++.+...+..+||||
T Consensus         2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E   81 (376)
T cd05598           2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD   81 (376)
T ss_pred             CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEe
Confidence            57788999999999999998 4568999999986432   2234668899999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhccC
Q 013018          423 FVPNKSLDYFLYAQS  437 (451)
Q Consensus       423 y~~~GsL~~~L~~~~  437 (451)
                      |+++|+|.++|....
T Consensus        82 ~~~~g~L~~~i~~~~   96 (376)
T cd05598          82 YIPGGDMMSLLIRLG   96 (376)
T ss_pred             CCCCCcHHHHHHhcC
Confidence            999999999998643

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=99.09  E-value=6.3e-11  Score=120.31  Aligned_cols=94  Identities=29%  Similarity=0.478  Sum_probs=79.2

Q ss_pred             cccceecccCceeEEEEE-cCCCcEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCcccceeEEEeC------ceeeEE
Q 013018          349 STDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSS-GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEG------EEKILV  420 (451)
Q Consensus       349 ~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~------~~~~lv  420 (451)
                      ...+.||+|+||.||+|. -..|+.||||.++..+ ....+.+.+|+++|+++.|+|||++.++-.+.      ....++
T Consensus        16 ~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlv   95 (732)
T KOG4250|consen   16 EMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLV   95 (732)
T ss_pred             eehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEE
Confidence            345789999999999999 6789999999997643 34567899999999999999999999886543      357899


Q ss_pred             EeccCCCCHHHHHhccCCCCCC
Q 013018          421 YEFVPNKSLDYFLYAQSPKNNN  442 (451)
Q Consensus       421 ~ey~~~GsL~~~L~~~~~~~~l  442 (451)
                      ||||.+|||...|.+..+...|
T Consensus        96 mEyC~gGsL~~~L~~PEN~~GL  117 (732)
T KOG4250|consen   96 MEYCSGGSLRKVLNSPENAYGL  117 (732)
T ss_pred             EeecCCCcHHHHhcCcccccCC
Confidence            9999999999999986654444

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.09  E-value=1.4e-10  Score=115.91  Aligned_cols=97  Identities=29%  Similarity=0.479  Sum_probs=81.1

Q ss_pred             HHHHhhccccccceecccCceeEEEEEc------CCCcEEEEEEeccCC-hhhHHHHHHHHHHHhcC-CCCCcccceeEE
Q 013018          340 TIEVATNNFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRLSRSS-GQGGQEFKNEVVLVAKL-QHRNLVRLLGFC  411 (451)
Q Consensus       340 ~l~~~~~~~~~~~~lG~G~fg~V~~~~l------~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~g~~  411 (451)
                      .+....++|...+.||+|+||.||++..      .++..||||++.... ....+.+.+|+.+++.+ +|+||++++|.+
T Consensus        32 ~~~~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~  111 (374)
T cd05106          32 KWEFPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGAC  111 (374)
T ss_pred             cccccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEe
Confidence            3345566788899999999999999873      233579999997543 33346789999999999 899999999999


Q ss_pred             EeCceeeEEEeccCCCCHHHHHhcc
Q 013018          412 LEGEEKILVYEFVPNKSLDYFLYAQ  436 (451)
Q Consensus       412 ~~~~~~~lv~ey~~~GsL~~~L~~~  436 (451)
                      ...+..++||||+++|+|.++|+..
T Consensus       112 ~~~~~~~lv~ey~~~g~L~~~l~~~  136 (374)
T cd05106         112 THGGPVLVITEYCCYGDLLNFLRKK  136 (374)
T ss_pred             cCCCCeEEeHhhccCCcHHHHHHhh
Confidence            9999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.08  E-value=3.1e-10  Score=108.24  Aligned_cols=92  Identities=32%  Similarity=0.656  Sum_probs=79.5

Q ss_pred             ccccccceecccCceeEEEEEcCC------CcEEEEEEeccCChh-hHHHHHHHHHHHhcCCCCCcccceeEEEeCceee
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVLPS------GQEIAVKRLSRSSGQ-GGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKI  418 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l~~------g~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~  418 (451)
                      ++|...+.||+|+||.||++...+      +..++||.+...... ..+.|.+|+.++.+++|+||+++++.+......+
T Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~   84 (280)
T cd05049           5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPI   84 (280)
T ss_pred             HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeE
Confidence            456778899999999999998532      478999998765433 4578999999999999999999999999999999


Q ss_pred             EEEeccCCCCHHHHHhccC
Q 013018          419 LVYEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       419 lv~ey~~~GsL~~~L~~~~  437 (451)
                      +++||+++|+|.++|+...
T Consensus        85 lv~e~~~~~~L~~~i~~~~  103 (280)
T cd05049          85 MVFEYMEHGDLNKFLRSHG  103 (280)
T ss_pred             EEEecCCCCCHHHHHHhcC
Confidence            9999999999999998653

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.08  E-value=2.1e-10  Score=114.47  Aligned_cols=104  Identities=22%  Similarity=0.254  Sum_probs=84.0

Q ss_pred             HhhccccccceecccCceeEEEEEc-CCCcEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceee
Q 013018          343 VATNNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRS---SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKI  418 (451)
Q Consensus       343 ~~~~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~  418 (451)
                      ...++|+..+.||+|+||.||++.. .++..+|+|.+...   .....+.+.+|+.+++.++||||+++++++......+
T Consensus        40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~  119 (370)
T cd05596          40 MKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLY  119 (370)
T ss_pred             CCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEE
Confidence            3456788889999999999999984 56889999998642   1223356789999999999999999999999889999


Q ss_pred             EEEeccCCCCHHHHHhccCCCCCCchhhhh
Q 013018          419 LVYEFVPNKSLDYFLYAQSPKNNNNWIGQD  448 (451)
Q Consensus       419 lv~ey~~~GsL~~~L~~~~~~~~l~W~~r~  448 (451)
                      +|+||+++|+|.++++...  -...|..++
T Consensus       120 lv~Ey~~gg~L~~~l~~~~--l~~~~~~~~  147 (370)
T cd05596         120 MVMEYMPGGDLVNLMSNYD--IPEKWARFY  147 (370)
T ss_pred             EEEcCCCCCcHHHHHHhcC--CCHHHHHHH
Confidence            9999999999999997643  234555443

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.08  E-value=2.8e-10  Score=108.67  Aligned_cols=93  Identities=24%  Similarity=0.374  Sum_probs=82.4

Q ss_pred             hhccccccceecccCceeEEEEEc-CCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEe
Q 013018          344 ATNNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  422 (451)
Q Consensus       344 ~~~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  422 (451)
                      +.++|...+.||+|+||.||++.. .++..+++|.+........+.|.+|++++++++||||+++++.+..+...++|+|
T Consensus         3 ~~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (280)
T cd06611           3 PNDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIE   82 (280)
T ss_pred             chhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEee
Confidence            345678889999999999999995 4688999999976655566789999999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhcc
Q 013018          423 FVPNKSLDYFLYAQ  436 (451)
Q Consensus       423 y~~~GsL~~~L~~~  436 (451)
                      |+++|+|.+++...
T Consensus        83 ~~~~~~L~~~~~~~   96 (280)
T cd06611          83 FCDGGALDSIMLEL   96 (280)
T ss_pred             ccCCCcHHHHHHHh
Confidence            99999999999864

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.08  E-value=5e-10  Score=106.19  Aligned_cols=101  Identities=26%  Similarity=0.436  Sum_probs=82.1

Q ss_pred             ccccccceecccCceeEEEEEcC-C---CcEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEE
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVLP-S---GQEIAVKRLSRSS-GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILV  420 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l~-~---g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv  420 (451)
                      ++|+..+.||+|+||.||+|... .   +..+++|.+.... ....+.|.+|+.++.+++||||+++.+++...+..++|
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   83 (267)
T cd05066           4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV   83 (267)
T ss_pred             HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence            45677899999999999999852 2   3378999886542 33456899999999999999999999999988899999


Q ss_pred             EeccCCCCHHHHHhccCCCCCCchhhhh
Q 013018          421 YEFVPNKSLDYFLYAQSPKNNNNWIGQD  448 (451)
Q Consensus       421 ~ey~~~GsL~~~L~~~~~~~~l~W~~r~  448 (451)
                      +||+++|+|.++++...  ..++|.+.+
T Consensus        84 ~e~~~~~~L~~~~~~~~--~~~~~~~~~  109 (267)
T cd05066          84 TEYMENGSLDAFLRKHD--GQFTVIQLV  109 (267)
T ss_pred             EEcCCCCCHHHHHHhcC--CCCCHHHHH
Confidence            99999999999998643  235665543

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.08  E-value=5e-10  Score=107.44  Aligned_cols=98  Identities=24%  Similarity=0.330  Sum_probs=79.9

Q ss_pred             ccccceecccCceeEEEEEc-CCCcEEEEEEeccCCh---hhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEec
Q 013018          348 FSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSG---QGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  423 (451)
Q Consensus       348 ~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey  423 (451)
                      |+..++||+|+||.||++.. .+++.||+|.+.....   .....+.+|+.++++++||||+++.+.+..++..++||||
T Consensus         2 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (285)
T cd05605           2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL   81 (285)
T ss_pred             ceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEec
Confidence            56678999999999999994 5688999999865321   2234578999999999999999999999888899999999


Q ss_pred             cCCCCHHHHHhccCCCCCCchhh
Q 013018          424 VPNKSLDYFLYAQSPKNNNNWIG  446 (451)
Q Consensus       424 ~~~GsL~~~L~~~~~~~~l~W~~  446 (451)
                      +++|+|.++++... ...++|..
T Consensus        82 ~~~~~L~~~~~~~~-~~~~~~~~  103 (285)
T cd05605          82 MNGGDLKFHIYNMG-NPGFDEER  103 (285)
T ss_pred             cCCCcHHHHHHhcC-cCCCCHHH
Confidence            99999999987532 23355544

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.08  E-value=4.6e-10  Score=111.69  Aligned_cols=92  Identities=20%  Similarity=0.300  Sum_probs=79.0

Q ss_pred             ccccccceecccCceeEEEEE-cCCCcEEEEEEeccCC---hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEE
Q 013018          346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSS---GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  421 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~  421 (451)
                      ++|+..+.||+|+||.||++. ...++.+|+|++....   ......+.+|+.++.+++|+||+++++.+......+|||
T Consensus         1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~   80 (363)
T cd05628           1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM   80 (363)
T ss_pred             CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence            357788999999999999998 4568899999996532   223356889999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhccC
Q 013018          422 EFVPNKSLDYFLYAQS  437 (451)
Q Consensus       422 ey~~~GsL~~~L~~~~  437 (451)
                      ||+++|+|.++|....
T Consensus        81 E~~~gg~L~~~l~~~~   96 (363)
T cd05628          81 EFLPGGDMMTLLMKKD   96 (363)
T ss_pred             cCCCCCcHHHHHHhcC
Confidence            9999999999998643

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.08  E-value=4.1e-10  Score=106.26  Aligned_cols=103  Identities=30%  Similarity=0.391  Sum_probs=84.6

Q ss_pred             HhhccccccceecccCceeEEEEEcCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEe
Q 013018          343 VATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  422 (451)
Q Consensus       343 ~~~~~~~~~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  422 (451)
                      +..+.|+..++||+|+||.||++..++++.+++|.+.... ...+.|.+|+.++++++|+|++++.+.. ..+..++++|
T Consensus         3 ~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~~v~e   80 (260)
T cd05067           3 VPRETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGS-MSPEAFLAEANLMKQLQHPRLVRLYAVV-TQEPIYIITE   80 (260)
T ss_pred             cchHHceeeeeeccCccceEEeeecCCCceEEEEEecCCC-CcHHHHHHHHHHHHhcCCcCeeeEEEEE-ccCCcEEEEE
Confidence            3456678889999999999999998888999999987543 2346899999999999999999999876 4567899999


Q ss_pred             ccCCCCHHHHHhccCCCCCCchhhhh
Q 013018          423 FVPNKSLDYFLYAQSPKNNNNWIGQD  448 (451)
Q Consensus       423 y~~~GsL~~~L~~~~~~~~l~W~~r~  448 (451)
                      |+++|+|.++++.... ..++|.+.+
T Consensus        81 ~~~~~~L~~~~~~~~~-~~~~~~~~~  105 (260)
T cd05067          81 YMENGSLVDFLKTPEG-IKLTINKLI  105 (260)
T ss_pred             cCCCCCHHHHHHhcCC-CCCCHHHHH
Confidence            9999999999976432 346665544

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.08  E-value=4.4e-10  Score=110.80  Aligned_cols=93  Identities=25%  Similarity=0.303  Sum_probs=78.5

Q ss_pred             hccccccceecccCceeEEEEEcCC--CcEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeE
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGVLPS--GQEIAVKRLSRS---SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKIL  419 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~l~~--g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l  419 (451)
                      .++|+..+.||+|+||.||++....  +..||+|.+...   .....+.+.+|+.++..++||||+++++++...+..++
T Consensus        29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l  108 (340)
T PTZ00426         29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYL  108 (340)
T ss_pred             hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEE
Confidence            3457788999999999999998533  368999998643   22334678899999999999999999999999999999


Q ss_pred             EEeccCCCCHHHHHhccC
Q 013018          420 VYEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       420 v~ey~~~GsL~~~L~~~~  437 (451)
                      ||||+++|+|.++++...
T Consensus       109 v~Ey~~~g~L~~~i~~~~  126 (340)
T PTZ00426        109 VLEFVIGGEFFTFLRRNK  126 (340)
T ss_pred             EEeCCCCCcHHHHHHHcC
Confidence            999999999999998654

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.08  E-value=4.3e-10  Score=107.71  Aligned_cols=100  Identities=18%  Similarity=0.227  Sum_probs=83.6

Q ss_pred             cccccceecccCceeEEEEEcC-CCcEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEecc
Q 013018          347 NFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSRS-SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFV  424 (451)
Q Consensus       347 ~~~~~~~lG~G~fg~V~~~~l~-~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~  424 (451)
                      +|+..+.||+|+||.||++... .+..+++|.+... .......+.+|+.++.+++|+||+++++.+...+..++|+||+
T Consensus         2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~   81 (286)
T cd06622           2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYM   81 (286)
T ss_pred             hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeec
Confidence            5677889999999999999954 7899999988654 3333467999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhccCCCCCCchhh
Q 013018          425 PNKSLDYFLYAQSPKNNNNWIG  446 (451)
Q Consensus       425 ~~GsL~~~L~~~~~~~~l~W~~  446 (451)
                      ++++|.++++.......++|..
T Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~  103 (286)
T cd06622          82 DAGSLDKLYAGGVATEGIPEDV  103 (286)
T ss_pred             CCCCHHHHHHhccccCCCCHHH
Confidence            9999999998754334456644

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.07  E-value=4.4e-10  Score=106.52  Aligned_cols=102  Identities=25%  Similarity=0.503  Sum_probs=83.8

Q ss_pred             hccccccceecccCceeEEEEEcC-CC---cEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeE
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGVLP-SG---QEIAVKRLSRS-SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKIL  419 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~l~-~g---~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l  419 (451)
                      .++|+..+.||+|+||.||++... ++   ..+++|.+... .....+++.+|+.++.+++|+|++++.+.+...+..++
T Consensus         4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   83 (268)
T cd05063           4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMI   83 (268)
T ss_pred             hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEE
Confidence            456778899999999999999964 23   36899988754 23345789999999999999999999999999899999


Q ss_pred             EEeccCCCCHHHHHhccCCCCCCchhhhh
Q 013018          420 VYEFVPNKSLDYFLYAQSPKNNNNWIGQD  448 (451)
Q Consensus       420 v~ey~~~GsL~~~L~~~~~~~~l~W~~r~  448 (451)
                      |+||+++|+|.++++.+.  ..++|.+++
T Consensus        84 v~e~~~~~~L~~~~~~~~--~~~~~~~~~  110 (268)
T cd05063          84 ITEYMENGALDKYLRDHD--GEFSSYQLV  110 (268)
T ss_pred             EEEcCCCCCHHHHHHhcC--CCCCHHHHH
Confidence            999999999999998643  346666554

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.07  E-value=6e-10  Score=106.88  Aligned_cols=99  Identities=24%  Similarity=0.316  Sum_probs=80.6

Q ss_pred             ccccceecccCceeEEEEE-cCCCcEEEEEEeccCC---hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEec
Q 013018          348 FSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSS---GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  423 (451)
Q Consensus       348 ~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey  423 (451)
                      |+..+.||+|+||.||++. ..+++.+|+|.+....   .+....+.+|+.++.+++|+||+++.+.+...+..++|+||
T Consensus         2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~   81 (285)
T cd05631           2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTI   81 (285)
T ss_pred             ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEe
Confidence            5667899999999999998 4578999999986432   22335688999999999999999999999988999999999


Q ss_pred             cCCCCHHHHHhccCCCCCCchhhh
Q 013018          424 VPNKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       424 ~~~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                      +++|+|.+++..... ..++|.+.
T Consensus        82 ~~~g~L~~~~~~~~~-~~~~~~~~  104 (285)
T cd05631          82 MNGGDLKFHIYNMGN-PGFDEQRA  104 (285)
T ss_pred             cCCCcHHHHHHhhCC-CCCCHHHH
Confidence            999999998875332 23555543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.07  E-value=4.3e-10  Score=107.89  Aligned_cols=93  Identities=31%  Similarity=0.589  Sum_probs=80.0

Q ss_pred             hhccccccceecccCceeEEEEEcC------CCcEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCce
Q 013018          344 ATNNFSTDNKLGEGGFGEVYKGVLP------SGQEIAVKRLSRSS-GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEE  416 (451)
Q Consensus       344 ~~~~~~~~~~lG~G~fg~V~~~~l~------~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~  416 (451)
                      ..++|+..+.||+|+||.||++...      .+..+++|.+.... .+...+|.+|+.++++++||||+++.+++...+.
T Consensus         3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~   82 (288)
T cd05050           3 PRNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKP   82 (288)
T ss_pred             ChHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCc
Confidence            3466888899999999999999853      35789999987543 3345679999999999999999999999998889


Q ss_pred             eeEEEeccCCCCHHHHHhcc
Q 013018          417 KILVYEFVPNKSLDYFLYAQ  436 (451)
Q Consensus       417 ~~lv~ey~~~GsL~~~L~~~  436 (451)
                      .++++||+++|+|.++++..
T Consensus        83 ~~lv~e~~~~~~L~~~l~~~  102 (288)
T cd05050          83 MCLLFEYMAYGDLNEFLRHR  102 (288)
T ss_pred             cEEEEecCCCCCHHHHHHHc
Confidence            99999999999999999854

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.07  E-value=5.7e-10  Score=107.11  Aligned_cols=93  Identities=33%  Similarity=0.629  Sum_probs=80.2

Q ss_pred             hccccccceecccCceeEEEEEcC------CCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceee
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGVLP------SGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKI  418 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~l~------~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~  418 (451)
                      .++|...+.||+|+||.||++...      ++..+++|.+........+.+.+|+.++.+++||||+++.+++...+..+
T Consensus         4 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   83 (288)
T cd05093           4 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLI   83 (288)
T ss_pred             hHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccE
Confidence            356778899999999999999842      24568999987665555678999999999999999999999999989999


Q ss_pred             EEEeccCCCCHHHHHhccC
Q 013018          419 LVYEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       419 lv~ey~~~GsL~~~L~~~~  437 (451)
                      +++||+++|+|.++|+...
T Consensus        84 lv~e~~~~~~L~~~i~~~~  102 (288)
T cd05093          84 MVFEYMKHGDLNKFLRAHG  102 (288)
T ss_pred             EEEEcCCCCCHHHHHHHcC
Confidence            9999999999999998643

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.07  E-value=6.6e-10  Score=104.28  Aligned_cols=94  Identities=27%  Similarity=0.457  Sum_probs=78.5

Q ss_pred             ceecccCceeEEEEEc-CCCcEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEeccCCCCH
Q 013018          352 NKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSS-GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSL  429 (451)
Q Consensus       352 ~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~~~GsL  429 (451)
                      +.||+|+||.||++.. .+++.+++|.+.... .+....+.+|++++++++||||+++++++......++|+||+++++|
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF   80 (252)
T ss_pred             CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence            4689999999999995 478899999876442 33456799999999999999999999999998899999999999999


Q ss_pred             HHHHhccCCCCCCchhhh
Q 013018          430 DYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       430 ~~~L~~~~~~~~l~W~~r  447 (451)
                      .++++...  ..++|.+.
T Consensus        81 ~~~~~~~~--~~~~~~~~   96 (252)
T cd05084          81 LTFLRTEG--PRLKVKEL   96 (252)
T ss_pred             HHHHHhCC--CCCCHHHH
Confidence            99997543  23566543

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.07  E-value=5.4e-10  Score=106.04  Aligned_cols=100  Identities=26%  Similarity=0.460  Sum_probs=82.3

Q ss_pred             cccccceecccCceeEEEEEcCC-C---cEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEE
Q 013018          347 NFSTDNKLGEGGFGEVYKGVLPS-G---QEIAVKRLSRS-SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  421 (451)
Q Consensus       347 ~~~~~~~lG~G~fg~V~~~~l~~-g---~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~  421 (451)
                      .++..+.||+|+||.||+|.... +   ..|+||.+... ......+|.+|+.++++++||||+++.+.+....+.++|+
T Consensus         5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~   84 (269)
T cd05065           5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIIT   84 (269)
T ss_pred             HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEE
Confidence            46678899999999999999532 3   36999998754 3344578999999999999999999999998888999999


Q ss_pred             eccCCCCHHHHHhccCCCCCCchhhhh
Q 013018          422 EFVPNKSLDYFLYAQSPKNNNNWIGQD  448 (451)
Q Consensus       422 ey~~~GsL~~~L~~~~~~~~l~W~~r~  448 (451)
                      ||+++|+|.++++...  ..++|.+++
T Consensus        85 e~~~~~~L~~~l~~~~--~~~~~~~~~  109 (269)
T cd05065          85 EFMENGALDSFLRQND--GQFTVIQLV  109 (269)
T ss_pred             ecCCCCcHHHHHhhCC--CCCCHHHHH
Confidence            9999999999998643  346666544

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.06  E-value=4.5e-10  Score=107.15  Aligned_cols=105  Identities=29%  Similarity=0.521  Sum_probs=85.9

Q ss_pred             hhccccccceecccCceeEEEEEcCC------CcEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCce
Q 013018          344 ATNNFSTDNKLGEGGFGEVYKGVLPS------GQEIAVKRLSRSS-GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEE  416 (451)
Q Consensus       344 ~~~~~~~~~~lG~G~fg~V~~~~l~~------g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~  416 (451)
                      .+++|...+.||+|+||.||++....      +..|++|.+.... .....+|.+|+.++++++|+||+++++++...+.
T Consensus         4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~   83 (277)
T cd05036           4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLP   83 (277)
T ss_pred             CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCC
Confidence            35668888999999999999999643      5678999886543 3344679999999999999999999999998889


Q ss_pred             eeEEEeccCCCCHHHHHhccCCC----CCCchhhhh
Q 013018          417 KILVYEFVPNKSLDYFLYAQSPK----NNNNWIGQD  448 (451)
Q Consensus       417 ~~lv~ey~~~GsL~~~L~~~~~~----~~l~W~~r~  448 (451)
                      .++++||+++|+|.++++..+..    ..++|.+.+
T Consensus        84 ~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~  119 (277)
T cd05036          84 RFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLL  119 (277)
T ss_pred             cEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHH
Confidence            99999999999999999875432    246776653

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.06  E-value=5.1e-10  Score=106.88  Aligned_cols=105  Identities=24%  Similarity=0.382  Sum_probs=85.4

Q ss_pred             hhccccccceecccCceeEEEEEcCC-----CcEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCcccceeEEEe-Cce
Q 013018          344 ATNNFSTDNKLGEGGFGEVYKGVLPS-----GQEIAVKRLSRS-SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLE-GEE  416 (451)
Q Consensus       344 ~~~~~~~~~~lG~G~fg~V~~~~l~~-----g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~  416 (451)
                      ..++|...++||+|+||.||+|....     +..|++|.+... .....+.+.+|+.++.+++|+||+++++++.. +..
T Consensus         4 ~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~   83 (280)
T cd05043           4 SRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEP   83 (280)
T ss_pred             chhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence            45678888999999999999999655     678999988754 33345779999999999999999999999876 467


Q ss_pred             eeEEEeccCCCCHHHHHhccCCC-----CCCchhhhh
Q 013018          417 KILVYEFVPNKSLDYFLYAQSPK-----NNNNWIGQD  448 (451)
Q Consensus       417 ~~lv~ey~~~GsL~~~L~~~~~~-----~~l~W~~r~  448 (451)
                      .++++||+++|+|.++|......     ..++|.+.+
T Consensus        84 ~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~  120 (280)
T cd05043          84 PFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLV  120 (280)
T ss_pred             CEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHH
Confidence            88999999999999999865432     446776543

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.06  E-value=4.5e-10  Score=105.80  Aligned_cols=98  Identities=26%  Similarity=0.386  Sum_probs=82.1

Q ss_pred             cccccceecccCceeEEEEEcCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEeccCC
Q 013018          347 NFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPN  426 (451)
Q Consensus       347 ~~~~~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~~~  426 (451)
                      +|...+.||+|+||.||++..+.+..+++|.+.... ....+|.+|+.++.+++|+||+++.+.+...+..++|+||+++
T Consensus         5 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~   83 (256)
T cd05059           5 ELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGA-MSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMAN   83 (256)
T ss_pred             HcchhhhhccCCCceEEEeEecCCccEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCC
Confidence            466788999999999999998777789999886432 2345789999999999999999999999888899999999999


Q ss_pred             CCHHHHHhccCCCCCCchhhh
Q 013018          427 KSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       427 GsL~~~L~~~~~~~~l~W~~r  447 (451)
                      ++|.++++.+..  .++|.+.
T Consensus        84 ~~L~~~l~~~~~--~~~~~~~  102 (256)
T cd05059          84 GCLLNYLRERKG--KLGTEWL  102 (256)
T ss_pred             CCHHHHHHhccc--CCCHHHH
Confidence            999999986443  4566554

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.06  E-value=5.3e-10  Score=109.77  Aligned_cols=90  Identities=22%  Similarity=0.264  Sum_probs=77.7

Q ss_pred             ccccccceecccCceeEEEEEc-CCCcEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEE
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRS---SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  421 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~  421 (451)
                      ++|...+.||+|+||.||++.. .+++.+|+|.+...   .....+.+.+|+.++..++|+||+++.+.+...+..++|+
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (331)
T cd05597           1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM   80 (331)
T ss_pred             CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence            3577889999999999999994 56889999998642   1223456889999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhc
Q 013018          422 EFVPNKSLDYFLYA  435 (451)
Q Consensus       422 ey~~~GsL~~~L~~  435 (451)
                      ||+++|+|.+++..
T Consensus        81 e~~~g~~L~~~l~~   94 (331)
T cd05597          81 DYYVGGDLLTLLSK   94 (331)
T ss_pred             ecCCCCcHHHHHHH
Confidence            99999999999975

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.06  E-value=7.6e-10  Score=108.28  Aligned_cols=86  Identities=21%  Similarity=0.225  Sum_probs=74.1

Q ss_pred             ceecccCceeEEEEE-cCCCcEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEeccCCC
Q 013018          352 NKLGEGGFGEVYKGV-LPSGQEIAVKRLSRS---SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNK  427 (451)
Q Consensus       352 ~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~~~G  427 (451)
                      +.||+|+||.||++. ..+|..||+|.+...   .......+.+|+.++.+++||||+++.+.+...+..+|||||+++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (323)
T cd05595           1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence            469999999999998 457899999999753   2233456889999999999999999999999999999999999999


Q ss_pred             CHHHHHhccC
Q 013018          428 SLDYFLYAQS  437 (451)
Q Consensus       428 sL~~~L~~~~  437 (451)
                      +|.+++....
T Consensus        81 ~L~~~l~~~~   90 (323)
T cd05595          81 ELFFHLSRER   90 (323)
T ss_pred             cHHHHHHHcC
Confidence            9999987643

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.06  E-value=3.9e-10  Score=108.27  Aligned_cols=94  Identities=29%  Similarity=0.494  Sum_probs=79.4

Q ss_pred             HhhccccccceecccCceeEEEEEcC------CCcEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCc
Q 013018          343 VATNNFSTDNKLGEGGFGEVYKGVLP------SGQEIAVKRLSRSS-GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGE  415 (451)
Q Consensus       343 ~~~~~~~~~~~lG~G~fg~V~~~~l~------~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~  415 (451)
                      +..++|+..++||+|+||.||+|...      .+..||+|.+.... .....++.+|+.++++++|+||+++++.+....
T Consensus         3 ~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~   82 (288)
T cd05061           3 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQ   82 (288)
T ss_pred             ccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC
Confidence            45677888999999999999999742      24579999886443 233457889999999999999999999998888


Q ss_pred             eeeEEEeccCCCCHHHHHhcc
Q 013018          416 EKILVYEFVPNKSLDYFLYAQ  436 (451)
Q Consensus       416 ~~~lv~ey~~~GsL~~~L~~~  436 (451)
                      ..++|+||+++|+|.++++..
T Consensus        83 ~~~lv~e~~~~g~L~~~l~~~  103 (288)
T cd05061          83 PTLVVMELMAHGDLKSYLRSL  103 (288)
T ss_pred             CcEEEEeCCCCCCHHHHHHHh
Confidence            999999999999999999863

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.06  E-value=3.6e-10  Score=112.70  Aligned_cols=95  Identities=21%  Similarity=0.256  Sum_probs=80.5

Q ss_pred             HHhhccccccceecccCceeEEEEEc-CCCcEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCcee
Q 013018          342 EVATNNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRS---SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEK  417 (451)
Q Consensus       342 ~~~~~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~  417 (451)
                      ....++|+..+.||+|+||.||++.. .+++.+|+|.+...   .......+.+|+.+++.++||||+++++.+......
T Consensus        39 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~  118 (370)
T cd05621          39 QMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYL  118 (370)
T ss_pred             CCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEE
Confidence            34456788899999999999999994 46789999998642   122345688999999999999999999999999999


Q ss_pred             eEEEeccCCCCHHHHHhcc
Q 013018          418 ILVYEFVPNKSLDYFLYAQ  436 (451)
Q Consensus       418 ~lv~ey~~~GsL~~~L~~~  436 (451)
                      ++||||+++|+|.++++..
T Consensus       119 ~lv~Ey~~gg~L~~~l~~~  137 (370)
T cd05621         119 YMVMEYMPGGDLVNLMSNY  137 (370)
T ss_pred             EEEEcCCCCCcHHHHHHhc
Confidence            9999999999999999754

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.06  E-value=5.7e-10  Score=106.66  Aligned_cols=93  Identities=32%  Similarity=0.598  Sum_probs=80.4

Q ss_pred             hccccccceecccCceeEEEEEc------CCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceee
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKI  418 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~l------~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~  418 (451)
                      .+++...++||+|+||.||++..      ..+..+++|.+........+.|.+|+.++.+++|+||+++++.+...+..+
T Consensus         4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   83 (280)
T cd05092           4 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLL   83 (280)
T ss_pred             hHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceE
Confidence            34567789999999999999963      235678999887766666678999999999999999999999999888999


Q ss_pred             EEEeccCCCCHHHHHhccC
Q 013018          419 LVYEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       419 lv~ey~~~GsL~~~L~~~~  437 (451)
                      +++||+++|+|.++++...
T Consensus        84 lv~e~~~~~~L~~~i~~~~  102 (280)
T cd05092          84 MVFEYMRHGDLNRFLRSHG  102 (280)
T ss_pred             EEEecCCCCCHHHHHHhcC
Confidence            9999999999999998754

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.06  E-value=7.6e-10  Score=104.11  Aligned_cols=100  Identities=32%  Similarity=0.501  Sum_probs=84.3

Q ss_pred             hccccccceecccCceeEEEEEcCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEecc
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFV  424 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~  424 (451)
                      .++|+..+.||+|+||.||++.. .++.|++|.+..... ..+++.+|+.++.+++|+||+++++++...+..++|+||+
T Consensus         5 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~   82 (256)
T cd05039           5 SKELKLGATIGKGEFGDVMLGDY-RGQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYM   82 (256)
T ss_pred             hhhccceeeeecCCCceEEEEEe-cCcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEec
Confidence            34577789999999999999987 578999999976543 4578999999999999999999999999888999999999


Q ss_pred             CCCCHHHHHhccCCCCCCchhhh
Q 013018          425 PNKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       425 ~~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                      ++++|.++++.... ..++|.+.
T Consensus        83 ~~~~L~~~~~~~~~-~~~~~~~~  104 (256)
T cd05039          83 AKGSLVDYLRSRGR-AVITLAQQ  104 (256)
T ss_pred             CCCcHHHHHHhcCC-CCCCHHHH
Confidence            99999999986442 23555544

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.06  E-value=8.5e-10  Score=107.90  Aligned_cols=86  Identities=21%  Similarity=0.215  Sum_probs=74.3

Q ss_pred             ceecccCceeEEEEE-cCCCcEEEEEEeccCC---hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEeccCCC
Q 013018          352 NKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSS---GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNK  427 (451)
Q Consensus       352 ~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~~~G  427 (451)
                      +.||+|+||.||++. ..+|+.+|+|.+....   ......+.+|+.++.+++||||+++.+.+...+..+|||||+++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~   80 (323)
T cd05571           1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence            469999999999998 4578999999997532   233467889999999999999999999999999999999999999


Q ss_pred             CHHHHHhccC
Q 013018          428 SLDYFLYAQS  437 (451)
Q Consensus       428 sL~~~L~~~~  437 (451)
                      +|.+++...+
T Consensus        81 ~L~~~l~~~~   90 (323)
T cd05571          81 ELFFHLSRER   90 (323)
T ss_pred             cHHHHHHHcC
Confidence            9999998643

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.06  E-value=6.3e-10  Score=105.63  Aligned_cols=86  Identities=35%  Similarity=0.481  Sum_probs=72.8

Q ss_pred             ceecccCceeEEEEEcCC---CcEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEeccCCC
Q 013018          352 NKLGEGGFGEVYKGVLPS---GQEIAVKRLSRSS-GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNK  427 (451)
Q Consensus       352 ~~lG~G~fg~V~~~~l~~---g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~~~G  427 (451)
                      +.||+|+||.||+|...+   +..+++|.+.... ......+.+|+.++++++||||++++|.+......++||||+++|
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g   80 (269)
T cd05087           1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG   80 (269)
T ss_pred             CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence            368999999999998533   3578999886543 233457999999999999999999999998888899999999999


Q ss_pred             CHHHHHhccC
Q 013018          428 SLDYFLYAQS  437 (451)
Q Consensus       428 sL~~~L~~~~  437 (451)
                      +|.++|+..+
T Consensus        81 ~L~~~l~~~~   90 (269)
T cd05087          81 DLKGYLRSCR   90 (269)
T ss_pred             cHHHHHHHhh
Confidence            9999998644

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.06  E-value=4.6e-10  Score=106.30  Aligned_cols=86  Identities=29%  Similarity=0.500  Sum_probs=72.4

Q ss_pred             ceecccCceeEEEEEcCC-------------CcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceee
Q 013018          352 NKLGEGGFGEVYKGVLPS-------------GQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKI  418 (451)
Q Consensus       352 ~~lG~G~fg~V~~~~l~~-------------g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~  418 (451)
                      +.||+|+||.||+|.+..             ...|++|.+..........|.+|+.++..++||||+++++++......+
T Consensus         1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~   80 (262)
T cd05077           1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI   80 (262)
T ss_pred             CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence            468999999999998532             2258889886654444568899999999999999999999999888999


Q ss_pred             EEEeccCCCCHHHHHhccC
Q 013018          419 LVYEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       419 lv~ey~~~GsL~~~L~~~~  437 (451)
                      +++||+++|+|..+++...
T Consensus        81 lv~e~~~~~~l~~~~~~~~   99 (262)
T cd05077          81 MVEEFVEFGPLDLFMHRKS   99 (262)
T ss_pred             EEEecccCCCHHHHHHhcC
Confidence            9999999999999988643

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.06  E-value=4.6e-10  Score=106.17  Aligned_cols=102  Identities=29%  Similarity=0.466  Sum_probs=84.7

Q ss_pred             hccccccceecccCceeEEEEEc-CCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEec
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  423 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey  423 (451)
                      ..+|...+.||+|+||.||++.. +.+..+++|.+.... ....++.+|+.++.+++|+||+++++.+...+..++++||
T Consensus         5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   83 (263)
T cd05052           5 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF   83 (263)
T ss_pred             hHHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc-hHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEe
Confidence            34567788999999999999995 458899999986542 3456899999999999999999999999998999999999


Q ss_pred             cCCCCHHHHHhccCCCCCCchhhhh
Q 013018          424 VPNKSLDYFLYAQSPKNNNNWIGQD  448 (451)
Q Consensus       424 ~~~GsL~~~L~~~~~~~~l~W~~r~  448 (451)
                      +++|+|.+++..... ..++|..++
T Consensus        84 ~~~~~L~~~~~~~~~-~~l~~~~~~  107 (263)
T cd05052          84 MTYGNLLDYLRECNR-QEVNAVVLL  107 (263)
T ss_pred             CCCCcHHHHHHhCCC-CCCCHHHHH
Confidence            999999999976432 346776554

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.05  E-value=1.1e-09  Score=107.47  Aligned_cols=86  Identities=23%  Similarity=0.240  Sum_probs=74.4

Q ss_pred             ceecccCceeEEEEE-cCCCcEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEeccCCC
Q 013018          352 NKLGEGGFGEVYKGV-LPSGQEIAVKRLSRS---SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNK  427 (451)
Q Consensus       352 ~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~~~G  427 (451)
                      +.||+|+||.||++. ..+++.+|+|.+...   .......+.+|+.++++++||||+++.+.+...+..+|||||+++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g   80 (328)
T cd05593           1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG   80 (328)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence            468999999999998 457899999999753   2233467889999999999999999999999999999999999999


Q ss_pred             CHHHHHhccC
Q 013018          428 SLDYFLYAQS  437 (451)
Q Consensus       428 sL~~~L~~~~  437 (451)
                      +|.+++....
T Consensus        81 ~L~~~l~~~~   90 (328)
T cd05593          81 ELFFHLSRER   90 (328)
T ss_pred             CHHHHHHhcC
Confidence            9999987643

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.05  E-value=7e-10  Score=106.23  Aligned_cols=91  Identities=22%  Similarity=0.305  Sum_probs=79.1

Q ss_pred             ccccccceecccCceeEEEEE-cCCCcEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEec
Q 013018          346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSS-GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  423 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey  423 (451)
                      ++|+..+.||+|+||.||++. .+++..+++|.+.... ....+.+.+|++++..++||||+++++.+......++|+||
T Consensus         5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   84 (284)
T cd06620           5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF   84 (284)
T ss_pred             HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence            456778899999999999999 4568899999886543 33457899999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcc
Q 013018          424 VPNKSLDYFLYAQ  436 (451)
Q Consensus       424 ~~~GsL~~~L~~~  436 (451)
                      +++|+|.++++..
T Consensus        85 ~~~~~L~~~~~~~   97 (284)
T cd06620          85 MDCGSLDRIYKKG   97 (284)
T ss_pred             CCCCCHHHHHHhc
Confidence            9999999998764

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.05  E-value=1e-09  Score=103.04  Aligned_cols=98  Identities=27%  Similarity=0.321  Sum_probs=82.2

Q ss_pred             ccccceecccCceeEEEEEc-CCCcEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEecc
Q 013018          348 FSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRS--SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFV  424 (451)
Q Consensus       348 ~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~  424 (451)
                      |+..+.||+|++|.||++.. .+++.+++|.+...  ......++.+|++++++++|||++++++.+...+..++|+||+
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   81 (256)
T cd08529           2 FEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEYA   81 (256)
T ss_pred             ceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEeC
Confidence            56678999999999999995 46889999998643  3345578999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhccCCCCCCchhh
Q 013018          425 PNKSLDYFLYAQSPKNNNNWIG  446 (451)
Q Consensus       425 ~~GsL~~~L~~~~~~~~l~W~~  446 (451)
                      ++++|.++++... ...++|.+
T Consensus        82 ~~~~L~~~l~~~~-~~~~~~~~  102 (256)
T cd08529          82 ENGDLHKLLKMQR-GRPLPEDQ  102 (256)
T ss_pred             CCCcHHHHHHHhc-CCCCCHHH
Confidence            9999999998753 23455543

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.05  E-value=5.8e-10  Score=107.75  Aligned_cols=94  Identities=18%  Similarity=0.272  Sum_probs=83.2

Q ss_pred             hhccccccceecccCceeEEEEE-cCCCcEEEEEEeccCChh-hHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEE
Q 013018          344 ATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQ-GGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  421 (451)
Q Consensus       344 ~~~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~  421 (451)
                      ..+.|+..++||.|.-+.||+|. .+.++.||||++...... +..++.+|+..|+.++||||+++...+..++++|+||
T Consensus        24 n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVm  103 (516)
T KOG0582|consen   24 NAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVM  103 (516)
T ss_pred             CccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEee
Confidence            34567888999999999999999 678899999999865443 3588999999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhccC
Q 013018          422 EFVPNKSLDYFLYAQS  437 (451)
Q Consensus       422 ey~~~GsL~~~L~~~~  437 (451)
                      .||..||+.+.|+..-
T Consensus       104 pfMa~GS~ldIik~~~  119 (516)
T KOG0582|consen  104 PFMAGGSLLDIIKTYY  119 (516)
T ss_pred             hhhcCCcHHHHHHHHc
Confidence            9999999999998643

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.05  E-value=1.2e-09  Score=102.58  Aligned_cols=97  Identities=31%  Similarity=0.444  Sum_probs=80.7

Q ss_pred             ccccceecccCceeEEEEEcC-CCcEEEEEEeccCC-----hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEE
Q 013018          348 FSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSRSS-----GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  421 (451)
Q Consensus       348 ~~~~~~lG~G~fg~V~~~~l~-~g~~vavK~l~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~  421 (451)
                      |+..+.||+|+||.||+|... ++..+++|.+....     .+..+.+.+|+.++++++|+||+++.+.+......++++
T Consensus         2 ~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~   81 (258)
T cd06632           2 WRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFL   81 (258)
T ss_pred             ccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEEE
Confidence            456789999999999999964 78999999886432     223467999999999999999999999999889999999


Q ss_pred             eccCCCCHHHHHhccCCCCCCchhhh
Q 013018          422 EFVPNKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       422 ey~~~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                      ||+++++|.++++...   .++|.+.
T Consensus        82 e~~~~~~L~~~~~~~~---~~~~~~~  104 (258)
T cd06632          82 ELVPGGSLAKLLKKYG---SFPEPVI  104 (258)
T ss_pred             EecCCCcHHHHHHhcC---CCCHHHH
Confidence            9999999999998643   2455443

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.04  E-value=5.6e-10  Score=109.46  Aligned_cols=90  Identities=22%  Similarity=0.259  Sum_probs=78.5

Q ss_pred             cccccceecccCceeEEEEE-cCCCcEEEEEEeccCC---hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEe
Q 013018          347 NFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSS---GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  422 (451)
Q Consensus       347 ~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  422 (451)
                      +|...+.||+|+||.||++. ..+++.+|+|.+....   .+..+.+.+|+.++..++|+||+++.+.+...+..+||||
T Consensus         2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~e   81 (330)
T cd05601           2 DFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVME   81 (330)
T ss_pred             CceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEEC
Confidence            57788999999999999998 4578999999997542   2234668899999999999999999999988889999999


Q ss_pred             ccCCCCHHHHHhcc
Q 013018          423 FVPNKSLDYFLYAQ  436 (451)
Q Consensus       423 y~~~GsL~~~L~~~  436 (451)
                      |+++|+|.++++..
T Consensus        82 ~~~~~~L~~~l~~~   95 (330)
T cd05601          82 YQPGGDLLSLLNRY   95 (330)
T ss_pred             CCCCCCHHHHHHHh
Confidence            99999999999875

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.04  E-value=7e-10  Score=104.73  Aligned_cols=102  Identities=26%  Similarity=0.401  Sum_probs=84.1

Q ss_pred             HhhccccccceecccCceeEEEEEcCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEe
Q 013018          343 VATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  422 (451)
Q Consensus       343 ~~~~~~~~~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  422 (451)
                      +..+++...+.||+|+||.||++....+..+++|.+.... ...+.|.+|+.++++++|+|++++.+.... ...++++|
T Consensus         3 ~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e   80 (260)
T cd05073           3 IPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITE   80 (260)
T ss_pred             ccccceeEEeEecCccceEEEEEEecCCccEEEEecCCCh-hHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEE
Confidence            3456788899999999999999997777889999886542 345689999999999999999999998876 77899999


Q ss_pred             ccCCCCHHHHHhccCCCCCCchhhh
Q 013018          423 FVPNKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       423 y~~~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                      |+++|+|.+++.... ...++|.++
T Consensus        81 ~~~~~~L~~~~~~~~-~~~~~~~~~  104 (260)
T cd05073          81 FMAKGSLLDFLKSDE-GSKQPLPKL  104 (260)
T ss_pred             eCCCCcHHHHHHhCC-ccccCHHHH
Confidence            999999999998643 234566554

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.04  E-value=3.9e-10  Score=111.28  Aligned_cols=95  Identities=23%  Similarity=0.438  Sum_probs=78.1

Q ss_pred             HhhccccccceecccCceeEEEEEc------CCCcEEEEEEeccCC-hhhHHHHHHHHHHHhcC-CCCCcccceeEEEeC
Q 013018          343 VATNNFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRLSRSS-GQGGQEFKNEVVLVAKL-QHRNLVRLLGFCLEG  414 (451)
Q Consensus       343 ~~~~~~~~~~~lG~G~fg~V~~~~l------~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~  414 (451)
                      .+.++|...+.||+|+||.||++..      ..++.||||++.... ......+.+|+.++.++ +|+||+++++.+...
T Consensus         4 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~   83 (343)
T cd05103           4 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP   83 (343)
T ss_pred             cchhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecC
Confidence            3456788899999999999999972      356789999997543 23346789999999999 789999999988654


Q ss_pred             -ceeeEEEeccCCCCHHHHHhccC
Q 013018          415 -EEKILVYEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       415 -~~~~lv~ey~~~GsL~~~L~~~~  437 (451)
                       ...++++||+++|+|.++|+..+
T Consensus        84 ~~~~~lv~ey~~~g~L~~~i~~~~  107 (343)
T cd05103          84 GGPLMVIVEFCKFGNLSNYLRSKR  107 (343)
T ss_pred             CCceEEEEeccCCCcHHHHHHhcC
Confidence             46789999999999999998643

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.04  E-value=1.3e-09  Score=103.00  Aligned_cols=90  Identities=33%  Similarity=0.586  Sum_probs=77.8

Q ss_pred             ccccceecccCceeEEEEEcCCCcEEEEEEeccCC------hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEE
Q 013018          348 FSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSS------GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  421 (451)
Q Consensus       348 ~~~~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~------~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~  421 (451)
                      ++..+.||+|+||.||++...+++.+|||.+....      .+....+.+|++++++++|+||+++++++......++++
T Consensus         2 ~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~   81 (265)
T cd06631           2 WTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIFM   81 (265)
T ss_pred             ccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEEE
Confidence            56678999999999999998788999999886432      112356889999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhccC
Q 013018          422 EFVPNKSLDYFLYAQS  437 (451)
Q Consensus       422 ey~~~GsL~~~L~~~~  437 (451)
                      ||+++|+|.+++.+..
T Consensus        82 e~~~~~~L~~~l~~~~   97 (265)
T cd06631          82 EFVPGGSISSILNRFG   97 (265)
T ss_pred             ecCCCCcHHHHHHhcC
Confidence            9999999999998643

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.04  E-value=6.8e-10  Score=108.99  Aligned_cols=91  Identities=19%  Similarity=0.186  Sum_probs=77.8

Q ss_pred             ccccccceecccCceeEEEEEc-CCCcEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEE
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRS---SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  421 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~  421 (451)
                      ++|...+.||+|+||.||++.. ..++.+|+|.+...   .......+.+|..++..++|+||+++.+.+...+..+|||
T Consensus         1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~   80 (331)
T cd05624           1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM   80 (331)
T ss_pred             CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence            3577889999999999999994 46788999998642   1223356888999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhcc
Q 013018          422 EFVPNKSLDYFLYAQ  436 (451)
Q Consensus       422 ey~~~GsL~~~L~~~  436 (451)
                      ||+++|+|.++|+..
T Consensus        81 Ey~~gg~L~~~l~~~   95 (331)
T cd05624          81 DYYVGGDLLTLLSKF   95 (331)
T ss_pred             eCCCCCcHHHHHHHh
Confidence            999999999999863

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.04  E-value=5.5e-10  Score=107.64  Aligned_cols=92  Identities=29%  Similarity=0.533  Sum_probs=77.4

Q ss_pred             hccccccceecccCceeEEEEEcCC---------------CcEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCcccce
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGVLPS---------------GQEIAVKRLSRS-SGQGGQEFKNEVVLVAKLQHRNLVRLL  408 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~l~~---------------g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~  408 (451)
                      .++|...+.||+|+||.||++....               ...||+|.+... .......|.+|++++.+++|+|+++++
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~   83 (295)
T cd05097           4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLL   83 (295)
T ss_pred             hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEE
Confidence            3567788999999999999987422               235899998754 333456799999999999999999999


Q ss_pred             eEEEeCceeeEEEeccCCCCHHHHHhcc
Q 013018          409 GFCLEGEEKILVYEFVPNKSLDYFLYAQ  436 (451)
Q Consensus       409 g~~~~~~~~~lv~ey~~~GsL~~~L~~~  436 (451)
                      +++...+..++||||+++++|.+++...
T Consensus        84 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~  111 (295)
T cd05097          84 GVCVSDDPLCMITEYMENGDLNQFLSQR  111 (295)
T ss_pred             EEEcCCCccEEEEecCCCCcHHHHHHhc
Confidence            9999999999999999999999999753

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.04  E-value=8.3e-10  Score=104.48  Aligned_cols=102  Identities=24%  Similarity=0.362  Sum_probs=83.9

Q ss_pred             ccccccceecccCceeEEEEE-cCCCcEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEE
Q 013018          346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRS---SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  421 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~  421 (451)
                      ++|+..+.||+|+||.||++. ..++..++||.+...   ......++.+|+.++++++|+||+++++.+...+..++++
T Consensus         2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~   81 (267)
T cd08229           2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL   81 (267)
T ss_pred             chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence            356778899999999999999 457899999988643   2233468999999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhccCC-CCCCchhhh
Q 013018          422 EFVPNKSLDYFLYAQSP-KNNNNWIGQ  447 (451)
Q Consensus       422 ey~~~GsL~~~L~~~~~-~~~l~W~~r  447 (451)
                      ||+++++|.++++.... ...++|.+.
T Consensus        82 e~~~~~~L~~~~~~~~~~~~~~~~~~~  108 (267)
T cd08229          82 ELADAGDLSRMIKHFKKQKRLIPEKTV  108 (267)
T ss_pred             EecCCCCHHHHHHHhhccCCCCCHHHH
Confidence            99999999999985332 344666654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.04  E-value=4.9e-10  Score=107.12  Aligned_cols=92  Identities=27%  Similarity=0.469  Sum_probs=77.9

Q ss_pred             cccccceecccCceeEEEEEc-CCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCc--eeeEEEec
Q 013018          347 NFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGE--EKILVYEF  423 (451)
Q Consensus       347 ~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~--~~~lv~ey  423 (451)
                      ++...+.||+|.||.||.+.. ++|+..|||.+........+.+.+|+.+|.+++|||||+..|.....+  ...|.|||
T Consensus        18 ~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mEy   97 (313)
T KOG0198|consen   18 NWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFMEY   97 (313)
T ss_pred             hhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeeec
Confidence            355678999999999999995 458999999997664333677999999999999999999999855544  58899999


Q ss_pred             cCCCCHHHHHhccCC
Q 013018          424 VPNKSLDYFLYAQSP  438 (451)
Q Consensus       424 ~~~GsL~~~L~~~~~  438 (451)
                      +++|+|.+++.+.+.
T Consensus        98 ~~~GsL~~~~~~~g~  112 (313)
T KOG0198|consen   98 APGGSLSDLIKRYGG  112 (313)
T ss_pred             cCCCcHHHHHHHcCC
Confidence            999999999998664

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.03  E-value=1.3e-09  Score=105.27  Aligned_cols=90  Identities=26%  Similarity=0.472  Sum_probs=80.3

Q ss_pred             ccccccceecccCceeEEEEE-cCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEecc
Q 013018          346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFV  424 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~  424 (451)
                      .+|...+.||+|+||.||++. ..+++.|++|.+........+.+.+|+.+++.++|+||+++++.+...+..++|+||+
T Consensus        19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~   98 (297)
T cd06656          19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL   98 (297)
T ss_pred             hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeeccc
Confidence            457788999999999999999 4678999999997655445577899999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhc
Q 013018          425 PNKSLDYFLYA  435 (451)
Q Consensus       425 ~~GsL~~~L~~  435 (451)
                      ++++|.+++.+
T Consensus        99 ~~~~L~~~~~~  109 (297)
T cd06656          99 AGGSLTDVVTE  109 (297)
T ss_pred             CCCCHHHHHHh
Confidence            99999999975

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.03  E-value=9.4e-10  Score=105.79  Aligned_cols=92  Identities=30%  Similarity=0.592  Sum_probs=79.1

Q ss_pred             ccccccceecccCceeEEEEEc------CCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeE
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKIL  419 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l------~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l  419 (451)
                      .+|...+.||+|+||.||++..      .++..+++|.+........+.+.+|+.++++++|+||+++++.+...+..++
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   84 (291)
T cd05094           5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIM   84 (291)
T ss_pred             HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEE
Confidence            3467778999999999999973      2345689999876665556789999999999999999999999999889999


Q ss_pred             EEeccCCCCHHHHHhccC
Q 013018          420 VYEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       420 v~ey~~~GsL~~~L~~~~  437 (451)
                      ||||+++|+|.++++...
T Consensus        85 v~e~~~~~~L~~~i~~~~  102 (291)
T cd05094          85 VFEYMKHGDLNKFLRAHG  102 (291)
T ss_pred             EEecCCCCcHHHHHHhcC
Confidence            999999999999998643

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.03  E-value=1.5e-09  Score=102.11  Aligned_cols=99  Identities=18%  Similarity=0.225  Sum_probs=82.2

Q ss_pred             cccccceecccCceeEEEEE-cCCCcEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEec
Q 013018          347 NFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRS--SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  423 (451)
Q Consensus       347 ~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey  423 (451)
                      +|+..+.||+|+||.||.+. ..+++.+++|.+...  ......++.+|+.++++++|+||+++++++...+..++++||
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~   80 (256)
T cd08221           1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY   80 (256)
T ss_pred             CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence            36778999999999999888 456889999988644  334456799999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhccCCCCCCchhh
Q 013018          424 VPNKSLDYFLYAQSPKNNNNWIG  446 (451)
Q Consensus       424 ~~~GsL~~~L~~~~~~~~l~W~~  446 (451)
                      +++|+|.+++.... ...+++.+
T Consensus        81 ~~~~~L~~~~~~~~-~~~~~~~~  102 (256)
T cd08221          81 ANGGTLYDKIVRQK-GQLFEEEM  102 (256)
T ss_pred             cCCCcHHHHHHhcc-ccCCCHHH
Confidence            99999999998653 23345543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.03  E-value=7.5e-10  Score=106.43  Aligned_cols=96  Identities=27%  Similarity=0.491  Sum_probs=80.7

Q ss_pred             HHHhhccccccceecccCceeEEEEEcC------CCcEEEEEEeccC-ChhhHHHHHHHHHHHhcC-CCCCcccceeEEE
Q 013018          341 IEVATNNFSTDNKLGEGGFGEVYKGVLP------SGQEIAVKRLSRS-SGQGGQEFKNEVVLVAKL-QHRNLVRLLGFCL  412 (451)
Q Consensus       341 l~~~~~~~~~~~~lG~G~fg~V~~~~l~------~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~  412 (451)
                      ++...++|+..+.||+|+||.||++...      ....+++|.+... ..+...++.+|+.++.++ +|+||+++++.+.
T Consensus         7 ~~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~   86 (293)
T cd05053           7 WELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCT   86 (293)
T ss_pred             cccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEc
Confidence            3455667888899999999999999853      2367899998754 334456799999999999 7999999999999


Q ss_pred             eCceeeEEEeccCCCCHHHHHhcc
Q 013018          413 EGEEKILVYEFVPNKSLDYFLYAQ  436 (451)
Q Consensus       413 ~~~~~~lv~ey~~~GsL~~~L~~~  436 (451)
                      ..+..++++||+++|+|.++++..
T Consensus        87 ~~~~~~li~e~~~~~~L~~~l~~~  110 (293)
T cd05053          87 QEGPLYVVVEYAAHGNLRDFLRAR  110 (293)
T ss_pred             CCCCeEEEEEeCCCCcHHHHHHhc
Confidence            988999999999999999999864

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.03  E-value=1e-09  Score=106.78  Aligned_cols=84  Identities=21%  Similarity=0.220  Sum_probs=72.8

Q ss_pred             ecccCceeEEEEEc-CCCcEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEeccCCCCH
Q 013018          354 LGEGGFGEVYKGVL-PSGQEIAVKRLSRS---SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSL  429 (451)
Q Consensus       354 lG~G~fg~V~~~~l-~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~~~GsL  429 (451)
                      ||+|+||.||++.. .+++.+|+|.+...   .......+.+|+.++.+++||||+++.+.+...+..++|+||+++|+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L   80 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL   80 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence            69999999999994 46889999998643   233446788999999999999999999999989999999999999999


Q ss_pred             HHHHhccC
Q 013018          430 DYFLYAQS  437 (451)
Q Consensus       430 ~~~L~~~~  437 (451)
                      .+++....
T Consensus        81 ~~~l~~~~   88 (312)
T cd05585          81 FHHLQREG   88 (312)
T ss_pred             HHHHHhcC
Confidence            99998643

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=99.03  E-value=2e-10  Score=107.16  Aligned_cols=92  Identities=22%  Similarity=0.381  Sum_probs=75.3

Q ss_pred             hccccccceecccCceeEEEEE-cCCCcEEEEEEeccCChhh--HHHHHHHHHHHhcCCCCCcccceeEEEeC--ceeeE
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQG--GQEFKNEVVLVAKLQHRNLVRLLGFCLEG--EEKIL  419 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~g~~~~~--~~~~l  419 (451)
                      .++|...+.|++|.||.||+|+ -++++.||+|+++-.....  .-.-++||.+|.+++|||||.+..+....  +.+||
T Consensus        75 v~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~  154 (419)
T KOG0663|consen   75 VEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYI  154 (419)
T ss_pred             HHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeee
Confidence            3456778999999999999999 5678999999997543221  13468999999999999999999888753  57999


Q ss_pred             EEeccCCCCHHHHHhccC
Q 013018          420 VYEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       420 v~ey~~~GsL~~~L~~~~  437 (451)
                      |||||++ ||...|..-+
T Consensus       155 VMe~~Eh-DLksl~d~m~  171 (419)
T KOG0663|consen  155 VMEYVEH-DLKSLMETMK  171 (419)
T ss_pred             eHHHHHh-hHHHHHHhcc
Confidence            9999988 9999888633

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.03  E-value=6.6e-10  Score=105.12  Aligned_cols=102  Identities=26%  Similarity=0.378  Sum_probs=81.8

Q ss_pred             hhccccccceecccCceeEEEEEcCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEec
Q 013018          344 ATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  423 (451)
Q Consensus       344 ~~~~~~~~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey  423 (451)
                      ..++|...++||+|+||.||++...+...|++|.+.... ...++|.+|+.++.+++|+||+++.+... .+..++|+||
T Consensus         4 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~   81 (262)
T cd05071           4 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEY   81 (262)
T ss_pred             ChHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCc-cCHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEEc
Confidence            345678889999999999999997666789999987532 23467999999999999999999998764 4567899999


Q ss_pred             cCCCCHHHHHhccCCCCCCchhhhh
Q 013018          424 VPNKSLDYFLYAQSPKNNNNWIGQD  448 (451)
Q Consensus       424 ~~~GsL~~~L~~~~~~~~l~W~~r~  448 (451)
                      +++|+|.++++... ...++|.++.
T Consensus        82 ~~~~~L~~~~~~~~-~~~~~~~~~~  105 (262)
T cd05071          82 MSKGSLLDFLKGEM-GKYLRLPQLV  105 (262)
T ss_pred             CCCCcHHHHHhhcc-ccCCCHHHHH
Confidence            99999999998643 2345665543

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.03  E-value=1.5e-09  Score=102.55  Aligned_cols=102  Identities=25%  Similarity=0.371  Sum_probs=84.0

Q ss_pred             ccccccceecccCceeEEEEEcC-CCcEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEE
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSRS---SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  421 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l~-~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~  421 (451)
                      ++|+..+.||+|+||.||++... +|+.+++|.++..   .....+.+.+|++++++++|+|++++++.+...+..++++
T Consensus         2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~   81 (267)
T cd08224           2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL   81 (267)
T ss_pred             CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence            46788899999999999999954 7899999988632   2233568999999999999999999999999989999999


Q ss_pred             eccCCCCHHHHHhccCC-CCCCchhhh
Q 013018          422 EFVPNKSLDYFLYAQSP-KNNNNWIGQ  447 (451)
Q Consensus       422 ey~~~GsL~~~L~~~~~-~~~l~W~~r  447 (451)
                      ||+++|+|.+++..... +..+++.+.
T Consensus        82 e~~~~~~L~~~l~~~~~~~~~~~~~~~  108 (267)
T cd08224          82 ELADAGDLSRMIKHFKKQKRLIPERTI  108 (267)
T ss_pred             ecCCCCCHHHHHHHhcccCCCcCHHHH
Confidence            99999999999976432 333555443

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.03  E-value=6.5e-10  Score=110.95  Aligned_cols=98  Identities=19%  Similarity=0.242  Sum_probs=82.4

Q ss_pred             HHHHHhhccccccceecccCceeEEEEEc-CCCcEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeC
Q 013018          339 ETIEVATNNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRS---SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEG  414 (451)
Q Consensus       339 ~~l~~~~~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~  414 (451)
                      .+++...++|...+.||+|+||.||++.. ..++.+|+|.+...   .....+.+.+|+.++..++||||+++++.+...
T Consensus        36 ~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~  115 (371)
T cd05622          36 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD  115 (371)
T ss_pred             hhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcC
Confidence            34455667899999999999999999994 46789999998642   122335688999999999999999999999988


Q ss_pred             ceeeEEEeccCCCCHHHHHhcc
Q 013018          415 EEKILVYEFVPNKSLDYFLYAQ  436 (451)
Q Consensus       415 ~~~~lv~ey~~~GsL~~~L~~~  436 (451)
                      ...++|+||+++|+|.++++..
T Consensus       116 ~~~~lv~Ey~~gg~L~~~~~~~  137 (371)
T cd05622         116 RYLYMVMEYMPGGDLVNLMSNY  137 (371)
T ss_pred             CEEEEEEcCCCCCcHHHHHHhc
Confidence            9999999999999999999764

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.03  E-value=8e-10  Score=107.18  Aligned_cols=95  Identities=24%  Similarity=0.438  Sum_probs=79.7

Q ss_pred             HhhccccccceecccCceeEEEEEcC--------CCcEEEEEEeccC-ChhhHHHHHHHHHHHhcC-CCCCcccceeEEE
Q 013018          343 VATNNFSTDNKLGEGGFGEVYKGVLP--------SGQEIAVKRLSRS-SGQGGQEFKNEVVLVAKL-QHRNLVRLLGFCL  412 (451)
Q Consensus       343 ~~~~~~~~~~~lG~G~fg~V~~~~l~--------~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~  412 (451)
                      +..++|...+.||+|+||.||++...        .+..+|+|.+... ......++.+|+.++.++ +|+||+++++.+.
T Consensus        15 ~~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~   94 (307)
T cd05098          15 VPRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACT   94 (307)
T ss_pred             eehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEe
Confidence            34567888999999999999998731        2356999998754 234456789999999999 7999999999999


Q ss_pred             eCceeeEEEeccCCCCHHHHHhccC
Q 013018          413 EGEEKILVYEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       413 ~~~~~~lv~ey~~~GsL~~~L~~~~  437 (451)
                      ..+..++|+||+++|+|.++|+..+
T Consensus        95 ~~~~~~lv~e~~~~~~L~~~i~~~~  119 (307)
T cd05098          95 QDGPLYVIVEYASKGNLREYLRARR  119 (307)
T ss_pred             cCCceEEEEecCCCCcHHHHHHhcC
Confidence            9999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.02  E-value=8.6e-10  Score=110.58  Aligned_cols=94  Identities=22%  Similarity=0.358  Sum_probs=82.0

Q ss_pred             hccccccceecccCceeEEEEE-cCCCcEEEEEEeccCCh--hhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEE
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSG--QGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  421 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~  421 (451)
                      ...|.....||+|.|+.|..+. ...+..||||.+.+...  ...+.+.+|+++|..+.|||||+|+.+......+++|+
T Consensus        55 vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV~  134 (596)
T KOG0586|consen   55 VGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLVM  134 (596)
T ss_pred             ccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEEE
Confidence            3457778999999999999999 44789999999986532  33456999999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhccCC
Q 013018          422 EFVPNKSLDYFLYAQSP  438 (451)
Q Consensus       422 ey~~~GsL~~~L~~~~~  438 (451)
                      ||..+|.+.+||..+..
T Consensus       135 eya~~ge~~~yl~~~gr  151 (596)
T KOG0586|consen  135 EYASGGELFDYLVKHGR  151 (596)
T ss_pred             EeccCchhHHHHHhccc
Confidence            99999999999997654

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.02  E-value=6.6e-11  Score=115.01  Aligned_cols=91  Identities=25%  Similarity=0.428  Sum_probs=78.0

Q ss_pred             hccccccceecccCceeEEEEE-cCCCcEEEEEEeccCChhhHHH--HHHHHHHHhcCC-CCCcccceeEEEeCc-eeeE
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQE--FKNEVVLVAKLQ-HRNLVRLLGFCLEGE-EKIL  419 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~~~~~~--~~~E~~~l~~l~-h~niv~l~g~~~~~~-~~~l  419 (451)
                      .++|...++||.|.||.||+|+ ...|+.||||+++..-.. +++  =+||+..|++|. ||||++|..+..+.+ .+++
T Consensus         9 m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s-~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~f   87 (538)
T KOG0661|consen    9 MDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYS-WEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYF   87 (538)
T ss_pred             HHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhcc-HHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEee
Confidence            3567888999999999999999 678899999999765322 333  468999999998 999999999999877 8999


Q ss_pred             EEeccCCCCHHHHHhccC
Q 013018          420 VYEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       420 v~ey~~~GsL~~~L~~~~  437 (451)
                      |+|||+. +|.+++++++
T Consensus        88 VfE~Md~-NLYqLmK~R~  104 (538)
T KOG0661|consen   88 VFEFMDC-NLYQLMKDRN  104 (538)
T ss_pred             eHHhhhh-hHHHHHhhcC
Confidence            9999966 9999999863

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.02  E-value=1.4e-09  Score=102.95  Aligned_cols=90  Identities=24%  Similarity=0.440  Sum_probs=77.7

Q ss_pred             ccccceecccCceeEEEEE-cCCCcEEEEEEeccCC------hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEE
Q 013018          348 FSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSS------GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILV  420 (451)
Q Consensus       348 ~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~------~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv  420 (451)
                      |+..+.||+|+||.||++. ..+++.+++|.+....      ....+.+.+|+.++++++|+||+++++.+...+..++|
T Consensus         2 ~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~v   81 (268)
T cd06630           2 WLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNLF   81 (268)
T ss_pred             ccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEEE
Confidence            5667899999999999998 5678999999986432      11246799999999999999999999999999999999


Q ss_pred             EeccCCCCHHHHHhccC
Q 013018          421 YEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       421 ~ey~~~GsL~~~L~~~~  437 (451)
                      +||+++++|.++|++..
T Consensus        82 ~e~~~~~~L~~~l~~~~   98 (268)
T cd06630          82 VEWMAGGSVSHLLSKYG   98 (268)
T ss_pred             EeccCCCcHHHHHHHhC
Confidence            99999999999998643

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.02  E-value=8.5e-10  Score=104.10  Aligned_cols=101  Identities=28%  Similarity=0.375  Sum_probs=82.4

Q ss_pred             hccccccceecccCceeEEEEEcCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEecc
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFV  424 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~  424 (451)
                      .++|...++||+|+||.||++...++..+++|.+..... ..+.|.+|+.++++++|+|++++++++. ....+++|||+
T Consensus         5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~   82 (260)
T cd05070           5 RESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYM   82 (260)
T ss_pred             hHHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEec
Confidence            456777899999999999999987888899999875432 3467999999999999999999998874 45688999999


Q ss_pred             CCCCHHHHHhccCCCCCCchhhhh
Q 013018          425 PNKSLDYFLYAQSPKNNNNWIGQD  448 (451)
Q Consensus       425 ~~GsL~~~L~~~~~~~~l~W~~r~  448 (451)
                      ++++|.++++.... ..++|.++.
T Consensus        83 ~~~~L~~~~~~~~~-~~~~~~~~~  105 (260)
T cd05070          83 SKGSLLDFLKDGEG-RALKLPNLV  105 (260)
T ss_pred             CCCcHHHHHHhcCC-CCCCHHHHH
Confidence            99999999986432 235665543

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.02  E-value=1e-09  Score=106.18  Aligned_cols=105  Identities=26%  Similarity=0.381  Sum_probs=84.4

Q ss_pred             HhhccccccceecccCceeEEEEEc------CCCcEEEEEEeccCC-hhhHHHHHHHHHHHhcC-CCCCcccceeEEEeC
Q 013018          343 VATNNFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRLSRSS-GQGGQEFKNEVVLVAKL-QHRNLVRLLGFCLEG  414 (451)
Q Consensus       343 ~~~~~~~~~~~lG~G~fg~V~~~~l------~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~  414 (451)
                      ...++|...+.||+|+||.||++..      ..+..+|||.+.... ....+.+.+|+.+++++ +|+||+++++.+...
T Consensus        32 ~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~  111 (302)
T cd05055          32 FPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIG  111 (302)
T ss_pred             ccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecC
Confidence            3445688899999999999999973      124579999887543 33346799999999999 799999999999988


Q ss_pred             ceeeEEEeccCCCCHHHHHhccCCCCCCchhhhh
Q 013018          415 EEKILVYEFVPNKSLDYFLYAQSPKNNNNWIGQD  448 (451)
Q Consensus       415 ~~~~lv~ey~~~GsL~~~L~~~~~~~~l~W~~r~  448 (451)
                      +..++++||+++|+|.++++.... ..++|.+..
T Consensus       112 ~~~~lv~e~~~~~~L~~~i~~~~~-~~l~~~~~~  144 (302)
T cd05055         112 GPILVITEYCCYGDLLNFLRRKRE-SFLTLEDLL  144 (302)
T ss_pred             CceEEEEEcCCCCcHHHHHHhCCC-CCCCHHHHH
Confidence            999999999999999999986432 336666543

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.02  E-value=1.3e-09  Score=112.49  Aligned_cols=89  Identities=10%  Similarity=0.161  Sum_probs=77.3

Q ss_pred             ccccceecccCceeEEEEEc-CC-CcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEeccC
Q 013018          348 FSTDNKLGEGGFGEVYKGVL-PS-GQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVP  425 (451)
Q Consensus       348 ~~~~~~lG~G~fg~V~~~~l-~~-g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~~  425 (451)
                      |...+.||+|+||.||++.. .+ ++.|++|.+..........+.+|+.++++++||||+++++.+...+..+|||||++
T Consensus        69 y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~~  148 (478)
T PTZ00267         69 YVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYGS  148 (478)
T ss_pred             EEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECCC
Confidence            67789999999999999983 34 67888888765555555678899999999999999999999999999999999999


Q ss_pred             CCCHHHHHhcc
Q 013018          426 NKSLDYFLYAQ  436 (451)
Q Consensus       426 ~GsL~~~L~~~  436 (451)
                      +|+|.++|+..
T Consensus       149 gg~L~~~l~~~  159 (478)
T PTZ00267        149 GGDLNKQIKQR  159 (478)
T ss_pred             CCCHHHHHHHH
Confidence            99999998753

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.02  E-value=1.2e-09  Score=108.53  Aligned_cols=92  Identities=20%  Similarity=0.317  Sum_probs=78.8

Q ss_pred             ccccccceecccCceeEEEEEc-CCCcEEEEEEeccCC---hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEE
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSS---GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  421 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~  421 (451)
                      ++|+..+.||+|+||.||++.. ..++.+|+|.+....   ......+.+|+.++.+++|+||+++++.+...+..+|||
T Consensus         1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~   80 (360)
T cd05627           1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM   80 (360)
T ss_pred             CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence            3577789999999999999984 568899999996431   223467889999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhccC
Q 013018          422 EFVPNKSLDYFLYAQS  437 (451)
Q Consensus       422 ey~~~GsL~~~L~~~~  437 (451)
                      ||+++|+|.++++...
T Consensus        81 E~~~gg~L~~~l~~~~   96 (360)
T cd05627          81 EFLPGGDMMTLLMKKD   96 (360)
T ss_pred             eCCCCccHHHHHHhcC
Confidence            9999999999998644

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.02  E-value=2.7e-10  Score=107.48  Aligned_cols=94  Identities=30%  Similarity=0.493  Sum_probs=76.3

Q ss_pred             ceecccCceeEEEEEcCC--------CcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEec
Q 013018          352 NKLGEGGFGEVYKGVLPS--------GQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  423 (451)
Q Consensus       352 ~~lG~G~fg~V~~~~l~~--------g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey  423 (451)
                      +.||+|+||.||+|....        ...+++|.+........+++.+|+.++..++||||+++.+.+..++..++||||
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~   80 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY   80 (258)
T ss_pred             CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence            468999999999998532        234888887655444557899999999999999999999999998899999999


Q ss_pred             cCCCCHHHHHhccCCCCCCchhhh
Q 013018          424 VPNKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       424 ~~~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                      +++|+|.++|+.+..  .++|..+
T Consensus        81 ~~~g~L~~~l~~~~~--~~~~~~~  102 (258)
T cd05078          81 VKFGSLDTYLKKNKN--LINISWK  102 (258)
T ss_pred             CCCCcHHHHHhcCCC--CCCHHHH
Confidence            999999999987543  3455443

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.02  E-value=8.1e-10  Score=107.63  Aligned_cols=98  Identities=29%  Similarity=0.528  Sum_probs=78.6

Q ss_pred             ccccccceecccCceeEEEEEc-CCCc----EEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeE
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVL-PSGQ----EIAVKRLSRSS-GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKIL  419 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l-~~g~----~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l  419 (451)
                      .+|+..+.||+|+||.||+|.+ .+++    .||+|.+.... ....+++.+|+.+++.++||||++++|++... ..++
T Consensus         7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~   85 (316)
T cd05108           7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL   85 (316)
T ss_pred             hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Ccee
Confidence            4578889999999999999984 3343    38999987543 34457899999999999999999999999764 5679


Q ss_pred             EEeccCCCCHHHHHhccCCCCCCchhh
Q 013018          420 VYEFVPNKSLDYFLYAQSPKNNNNWIG  446 (451)
Q Consensus       420 v~ey~~~GsL~~~L~~~~~~~~l~W~~  446 (451)
                      ++||+++|+|.++++....  .++|..
T Consensus        86 v~e~~~~g~l~~~l~~~~~--~~~~~~  110 (316)
T cd05108          86 ITQLMPFGCLLDYVREHKD--NIGSQY  110 (316)
T ss_pred             eeecCCCCCHHHHHHhccc--cCCHHH
Confidence            9999999999999986532  244443

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.01  E-value=7.3e-10  Score=109.44  Aligned_cols=90  Identities=27%  Similarity=0.344  Sum_probs=78.9

Q ss_pred             cccccceecccCceeEEEEEc-CCCcEEEEEEeccCC---hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEe
Q 013018          347 NFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSS---GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  422 (451)
Q Consensus       347 ~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  422 (451)
                      +|...+.||+|+||.||++.. .+++.||||.+....   ......+.+|+.++..++|+||+++++.+...+..++|||
T Consensus         2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e   81 (350)
T cd05573           2 DFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVME   81 (350)
T ss_pred             CceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEEc
Confidence            577889999999999999994 468999999997432   2334678999999999999999999999998999999999


Q ss_pred             ccCCCCHHHHHhcc
Q 013018          423 FVPNKSLDYFLYAQ  436 (451)
Q Consensus       423 y~~~GsL~~~L~~~  436 (451)
                      |+++|+|.+++...
T Consensus        82 ~~~~~~L~~~l~~~   95 (350)
T cd05573          82 YMPGGDLMNLLIRK   95 (350)
T ss_pred             CCCCCCHHHHHHHc
Confidence            99999999999875

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.01  E-value=1.5e-09  Score=103.68  Aligned_cols=101  Identities=27%  Similarity=0.427  Sum_probs=83.3

Q ss_pred             cccccceecccCceeEEEEEc-CCCcEEEEEEeccCCh-hhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEecc
Q 013018          347 NFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSG-QGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFV  424 (451)
Q Consensus       347 ~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~  424 (451)
                      +|+..++||+|++|.||++.. .+|..++||.+..... ...+.+.+|+.++++++|+||+++++.+...+..+||+||+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   80 (284)
T cd07836           1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM   80 (284)
T ss_pred             CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence            367789999999999999995 4688999999875432 23467889999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhccCCCCCCchhhhh
Q 013018          425 PNKSLDYFLYAQSPKNNNNWIGQD  448 (451)
Q Consensus       425 ~~GsL~~~L~~~~~~~~l~W~~r~  448 (451)
                      + |+|.+++........++|.+..
T Consensus        81 ~-~~l~~~~~~~~~~~~~~~~~~~  103 (284)
T cd07836          81 D-KDLKKYMDTHGVRGALDPNTVK  103 (284)
T ss_pred             C-ccHHHHHHhcCCCCCcCHHHHH
Confidence            8 5899999876544556766543

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.01  E-value=1.5e-09  Score=103.84  Aligned_cols=98  Identities=22%  Similarity=0.326  Sum_probs=82.4

Q ss_pred             ccccceecccCceeEEEEEc-CCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEeccCC
Q 013018          348 FSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPN  426 (451)
Q Consensus       348 ~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~~~  426 (451)
                      |+..+.||+|+||.||++.. ..+..+++|.+........+.+.+|+++++.++|||++++++.+...+..++|+||+++
T Consensus         7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~   86 (282)
T cd06643           7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG   86 (282)
T ss_pred             HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCC
Confidence            45567899999999999995 45778899998766656667899999999999999999999999999999999999999


Q ss_pred             CCHHHHHhccCCCCCCchhhh
Q 013018          427 KSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       427 GsL~~~L~~~~~~~~l~W~~r  447 (451)
                      |+|..++....  ..++|..+
T Consensus        87 ~~l~~~~~~~~--~~l~~~~~  105 (282)
T cd06643          87 GAVDAVMLELE--RPLTEPQI  105 (282)
T ss_pred             CcHHHHHHhcC--CCCCHHHH
Confidence            99999887532  24666554

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.01  E-value=7.2e-10  Score=104.26  Aligned_cols=92  Identities=33%  Similarity=0.572  Sum_probs=74.2

Q ss_pred             ceecccCceeEEEEEcCCCc-----------EEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEE
Q 013018          352 NKLGEGGFGEVYKGVLPSGQ-----------EIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILV  420 (451)
Q Consensus       352 ~~lG~G~fg~V~~~~l~~g~-----------~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv  420 (451)
                      +.||+|+||.||+|...+..           .+++|.+...... ...|.+|+.++++++||||++++|.+.. +..++|
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv   78 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMV   78 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEE
Confidence            46899999999999964432           5778877654332 5789999999999999999999999988 778999


Q ss_pred             EeccCCCCHHHHHhccCCCCCCchhhh
Q 013018          421 YEFVPNKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       421 ~ey~~~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                      +||+++|+|.++++....  .++|..+
T Consensus        79 ~e~~~~~~L~~~l~~~~~--~~~~~~~  103 (259)
T cd05037          79 EEYVKFGPLDVFLHREKN--NVSLHWK  103 (259)
T ss_pred             EEcCCCCcHHHHHHhhcc--CCCHHHH
Confidence            999999999999987543  3455443

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.01  E-value=2e-09  Score=101.83  Aligned_cols=91  Identities=25%  Similarity=0.437  Sum_probs=78.3

Q ss_pred             ccccccceecccCceeEEEEEc-CCCcEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEE
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRS---SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  421 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~  421 (451)
                      ++|+..++||+|+||.||++.. .+++.++||.+...   .......+.+|+.++++++||||+++++.+...+..++++
T Consensus         2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   81 (267)
T cd08228           2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL   81 (267)
T ss_pred             cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence            4677889999999999999994 57899999987542   2333467899999999999999999999999889999999


Q ss_pred             eccCCCCHHHHHhcc
Q 013018          422 EFVPNKSLDYFLYAQ  436 (451)
Q Consensus       422 ey~~~GsL~~~L~~~  436 (451)
                      ||+++|+|.+++...
T Consensus        82 e~~~~~~L~~~~~~~   96 (267)
T cd08228          82 ELADAGDLSQMIKYF   96 (267)
T ss_pred             EecCCCcHHHHHHHh
Confidence            999999999998753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.01  E-value=2e-09  Score=103.95  Aligned_cols=90  Identities=24%  Similarity=0.461  Sum_probs=79.8

Q ss_pred             ccccccceecccCceeEEEEE-cCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEecc
Q 013018          346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFV  424 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~  424 (451)
                      .+|+..+.||+|+||.||++. ..++..+++|.+........+.+.+|+.+++.++|+||+++++.+......++|+||+
T Consensus        20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~   99 (296)
T cd06654          20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL   99 (296)
T ss_pred             cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeeccc
Confidence            356778899999999999998 4578899999997655555678999999999999999999999999889999999999


Q ss_pred             CCCCHHHHHhc
Q 013018          425 PNKSLDYFLYA  435 (451)
Q Consensus       425 ~~GsL~~~L~~  435 (451)
                      ++|+|.++++.
T Consensus       100 ~~~~L~~~~~~  110 (296)
T cd06654         100 AGGSLTDVVTE  110 (296)
T ss_pred             CCCCHHHHHHh
Confidence            99999999975

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.01  E-value=1e-09  Score=107.79  Aligned_cols=91  Identities=20%  Similarity=0.218  Sum_probs=77.2

Q ss_pred             ccccccceecccCceeEEEEEcC-CCcEEEEEEeccCC---hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEE
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSRSS---GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  421 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l~-~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~  421 (451)
                      ++|+..++||+|+||.||++... .++.+|+|.+....   ......+.+|+.++..++|+||+++.+.+...+..+|||
T Consensus         1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (332)
T cd05623           1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM   80 (332)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence            35778899999999999999954 57789999986421   222345889999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhcc
Q 013018          422 EFVPNKSLDYFLYAQ  436 (451)
Q Consensus       422 ey~~~GsL~~~L~~~  436 (451)
                      ||+++|+|.++|+..
T Consensus        81 ey~~~g~L~~~l~~~   95 (332)
T cd05623          81 DYYVGGDLLTLLSKF   95 (332)
T ss_pred             eccCCCcHHHHHHHh
Confidence            999999999999863

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.01  E-value=1.6e-09  Score=104.43  Aligned_cols=91  Identities=26%  Similarity=0.481  Sum_probs=79.7

Q ss_pred             ccccccceecccCceeEEEEE-cCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEecc
Q 013018          346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFV  424 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~  424 (451)
                      ++|...+.||+|+||.||++. ..++..+++|.+........+.+.+|+.++++++||||+++.+.+...+..++|+||+
T Consensus        19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~   98 (293)
T cd06647          19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYL   98 (293)
T ss_pred             hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecC
Confidence            457778999999999999998 4567899999986554444577899999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcc
Q 013018          425 PNKSLDYFLYAQ  436 (451)
Q Consensus       425 ~~GsL~~~L~~~  436 (451)
                      ++|+|.+++...
T Consensus        99 ~~~~L~~~~~~~  110 (293)
T cd06647          99 AGGSLTDVVTET  110 (293)
T ss_pred             CCCcHHHHHhhc
Confidence            999999999753

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.01  E-value=1.7e-09  Score=104.42  Aligned_cols=99  Identities=23%  Similarity=0.428  Sum_probs=84.8

Q ss_pred             ccccccceecccCceeEEEEE-cCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEecc
Q 013018          346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFV  424 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~  424 (451)
                      .+|+..+.||.|++|.||++. ..+++.|++|.+........+.+.+|+.+++.++|||++++++.+...+..++|+||+
T Consensus        19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   98 (296)
T cd06655          19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYL   98 (296)
T ss_pred             ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEec
Confidence            357788999999999999998 5678999999997655455678899999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhccCCCCCCchhhhh
Q 013018          425 PNKSLDYFLYAQSPKNNNNWIGQD  448 (451)
Q Consensus       425 ~~GsL~~~L~~~~~~~~l~W~~r~  448 (451)
                      ++|+|.+++...    .++|.++.
T Consensus        99 ~~~~L~~~~~~~----~l~~~~~~  118 (296)
T cd06655          99 AGGSLTDVVTET----CMDEAQIA  118 (296)
T ss_pred             CCCcHHHHHHhc----CCCHHHHH
Confidence            999999998753    25666544

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.01  E-value=1.7e-09  Score=105.98  Aligned_cols=97  Identities=15%  Similarity=0.199  Sum_probs=78.4

Q ss_pred             ccceeccc--CceeEEEEE-cCCCcEEEEEEeccCC--hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEecc
Q 013018          350 TDNKLGEG--GFGEVYKGV-LPSGQEIAVKRLSRSS--GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFV  424 (451)
Q Consensus       350 ~~~~lG~G--~fg~V~~~~-l~~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~  424 (451)
                      ..++||+|  +|+.||++. ..+|+.||+|++....  ....+.+.+|+.+++.++||||+++++++..++..++|+||+
T Consensus         2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~   81 (327)
T cd08227           2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM   81 (327)
T ss_pred             hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence            35789999  788999998 4678999999997542  223456778999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhccCCCCCCchhhh
Q 013018          425 PNKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       425 ~~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                      ++|+|.+++..+.. ..++|.+.
T Consensus        82 ~~~~l~~~~~~~~~-~~l~~~~~  103 (327)
T cd08227          82 AYGSAKDLICTHFM-DGMSELAI  103 (327)
T ss_pred             CCCcHHHHHHhhcc-CCCCHHHH
Confidence            99999999976432 23555443

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.01  E-value=9.4e-10  Score=104.73  Aligned_cols=94  Identities=26%  Similarity=0.505  Sum_probs=79.9

Q ss_pred             hhccccccceecccCceeEEEEEcC------CCcEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCce
Q 013018          344 ATNNFSTDNKLGEGGFGEVYKGVLP------SGQEIAVKRLSRSS-GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEE  416 (451)
Q Consensus       344 ~~~~~~~~~~lG~G~fg~V~~~~l~------~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~  416 (451)
                      ..++|...+.||+|+||.||++...      .+..+++|.+.... .....++.+|+.++.+++|+||+++++++.....
T Consensus         4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~   83 (277)
T cd05032           4 PREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQP   83 (277)
T ss_pred             chHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCC
Confidence            4567788899999999999999853      23689999986543 3345679999999999999999999999999999


Q ss_pred             eeEEEeccCCCCHHHHHhccC
Q 013018          417 KILVYEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       417 ~~lv~ey~~~GsL~~~L~~~~  437 (451)
                      .++|+||+++|+|.++|+...
T Consensus        84 ~~~v~e~~~~~~L~~~l~~~~  104 (277)
T cd05032          84 TLVVMELMAKGDLKSYLRSRR  104 (277)
T ss_pred             cEEEEecCCCCCHHHHHHhcc
Confidence            999999999999999998644

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.00  E-value=1.2e-09  Score=103.56  Aligned_cols=92  Identities=23%  Similarity=0.444  Sum_probs=80.0

Q ss_pred             ccccccceecccCceeEEEEE-cCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEecc
Q 013018          346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFV  424 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~  424 (451)
                      ++|...+.||+|+||.||++. ..+++.+++|.+..........+.+|+.++..++||||+++++.....+..++++||+
T Consensus         9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~   88 (267)
T cd06645           9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFC   88 (267)
T ss_pred             HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEecc
Confidence            456677899999999999998 4568899999987655445567889999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhccC
Q 013018          425 PNKSLDYFLYAQS  437 (451)
Q Consensus       425 ~~GsL~~~L~~~~  437 (451)
                      ++|+|.++++...
T Consensus        89 ~~~~L~~~~~~~~  101 (267)
T cd06645          89 GGGSLQDIYHVTG  101 (267)
T ss_pred             CCCcHHHHHHhcC
Confidence            9999999987643

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.00  E-value=1.5e-09  Score=103.72  Aligned_cols=92  Identities=36%  Similarity=0.639  Sum_probs=77.9

Q ss_pred             ccccccceecccCceeEEEEEcCC------CcEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceee
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVLPS------GQEIAVKRLSRSS-GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKI  418 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l~~------g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~  418 (451)
                      ++|+..+.||+|+||.||+|....      ...|++|.+.... .....+|.+|+.++.+++||||+++++++......+
T Consensus         5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~   84 (283)
T cd05048           5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTC   84 (283)
T ss_pred             HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceE
Confidence            357778999999999999998532      2579999987543 333467999999999999999999999999888999


Q ss_pred             EEEeccCCCCHHHHHhccC
Q 013018          419 LVYEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       419 lv~ey~~~GsL~~~L~~~~  437 (451)
                      +++||+++|+|.++|....
T Consensus        85 ~~~e~~~~~~L~~~l~~~~  103 (283)
T cd05048          85 MLFEYLAHGDLHEFLVRNS  103 (283)
T ss_pred             EEEecCCCCcHHHHHHhcC
Confidence            9999999999999998653

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=99.00  E-value=6.8e-10  Score=105.11  Aligned_cols=94  Identities=23%  Similarity=0.381  Sum_probs=81.6

Q ss_pred             hhccccccceecccCceeEEEEE-cCCCcEEEEEEeccCC---hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeE
Q 013018          344 ATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSS---GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKIL  419 (451)
Q Consensus       344 ~~~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l  419 (451)
                      ..++|+..++||+|+||+|+..+ .+.++..|+|.+++..   ..+.+...+|..+|.+++||.||+|+-.+.+.+.+||
T Consensus        23 ~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLyl  102 (357)
T KOG0598|consen   23 GPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYL  102 (357)
T ss_pred             ChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEE
Confidence            34678889999999999999998 5668899999997652   2345678899999999999999999988888999999


Q ss_pred             EEeccCCCCHHHHHhccC
Q 013018          420 VYEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       420 v~ey~~~GsL~~~L~~~~  437 (451)
                      |+||+.+|.|..+|.+.+
T Consensus       103 Vld~~~GGeLf~hL~~eg  120 (357)
T KOG0598|consen  103 VLDYLNGGELFYHLQREG  120 (357)
T ss_pred             EEeccCCccHHHHHHhcC
Confidence            999999999999998654

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.00  E-value=1.5e-09  Score=104.31  Aligned_cols=99  Identities=23%  Similarity=0.360  Sum_probs=84.2

Q ss_pred             ccccccceecccCceeEEEEEc-CCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEecc
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFV  424 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~  424 (451)
                      +.|+..++||+|+||.||++.. .++..+++|.+........+.+.+|+.++++++|+|++++.+.+......++||||+
T Consensus        12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   91 (292)
T cd06644          12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFC   91 (292)
T ss_pred             hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecC
Confidence            4577788999999999999995 458899999998766666788999999999999999999999998888999999999


Q ss_pred             CCCCHHHHHhccCCCCCCchhh
Q 013018          425 PNKSLDYFLYAQSPKNNNNWIG  446 (451)
Q Consensus       425 ~~GsL~~~L~~~~~~~~l~W~~  446 (451)
                      ++++|..++....  ..++|.+
T Consensus        92 ~~~~l~~~~~~~~--~~l~~~~  111 (292)
T cd06644          92 PGGAVDAIMLELD--RGLTEPQ  111 (292)
T ss_pred             CCCcHHHHHHhhc--CCCCHHH
Confidence            9999999887533  2355543

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.00  E-value=1.9e-09  Score=102.92  Aligned_cols=100  Identities=29%  Similarity=0.489  Sum_probs=81.8

Q ss_pred             cccccceecccCceeEEEEEcC-----CCcEEEEEEeccCChh-hHHHHHHHHHHHhcCCCCCcccceeEEEe--Cceee
Q 013018          347 NFSTDNKLGEGGFGEVYKGVLP-----SGQEIAVKRLSRSSGQ-GGQEFKNEVVLVAKLQHRNLVRLLGFCLE--GEEKI  418 (451)
Q Consensus       347 ~~~~~~~lG~G~fg~V~~~~l~-----~g~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~g~~~~--~~~~~  418 (451)
                      .|+..+.||+|+||.||++.+.     .+..+|||.+...... ..++|.+|+.++++++|+||+++.+++..  ....+
T Consensus         5 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~   84 (284)
T cd05038           5 HLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLR   84 (284)
T ss_pred             hchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCceE
Confidence            4666789999999999999853     3678999999765432 45789999999999999999999999876  55789


Q ss_pred             EEEeccCCCCHHHHHhccCCCCCCchhhhh
Q 013018          419 LVYEFVPNKSLDYFLYAQSPKNNNNWIGQD  448 (451)
Q Consensus       419 lv~ey~~~GsL~~~L~~~~~~~~l~W~~r~  448 (451)
                      +++||+++|+|.+++.....  .++|.+++
T Consensus        85 lv~e~~~~~~l~~~l~~~~~--~~~~~~~~  112 (284)
T cd05038          85 LIMEYLPSGSLRDYLQRHRD--QINLKRLL  112 (284)
T ss_pred             EEEecCCCCCHHHHHHhCcc--ccCHHHHH
Confidence            99999999999999986543  36665543

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.00  E-value=2.1e-09  Score=105.15  Aligned_cols=86  Identities=21%  Similarity=0.217  Sum_probs=73.9

Q ss_pred             ceecccCceeEEEEE-cCCCcEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEeccCCC
Q 013018          352 NKLGEGGFGEVYKGV-LPSGQEIAVKRLSRS---SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNK  427 (451)
Q Consensus       352 ~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~~~G  427 (451)
                      +.||+|+||.||++. ..++..+|+|.+...   .......+.+|+.++.+++||||+++.+.+...+..+|||||+++|
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (325)
T cd05594           1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (325)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence            469999999999998 457899999999753   2233467889999999999999999999999899999999999999


Q ss_pred             CHHHHHhccC
Q 013018          428 SLDYFLYAQS  437 (451)
Q Consensus       428 sL~~~L~~~~  437 (451)
                      +|.+++...+
T Consensus        81 ~L~~~l~~~~   90 (325)
T cd05594          81 ELFFHLSRER   90 (325)
T ss_pred             cHHHHHHhcC
Confidence            9999987643

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.99  E-value=1.3e-09  Score=107.93  Aligned_cols=94  Identities=22%  Similarity=0.431  Sum_probs=79.6

Q ss_pred             hhccccccceecccCceeEEEEE-cCCCcEEEEEEeccC----Ch-hhHHHHHHHHHHHhcCC-CCCcccceeEEEeCce
Q 013018          344 ATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRS----SG-QGGQEFKNEVVLVAKLQ-HRNLVRLLGFCLEGEE  416 (451)
Q Consensus       344 ~~~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~----~~-~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~  416 (451)
                      ...++...+.||+|.||.|+.+. ...++.||+|.+...    .. ...+...+|+.++++++ ||||+++..+......
T Consensus        15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~   94 (370)
T KOG0583|consen   15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTK   94 (370)
T ss_pred             ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCe
Confidence            34567888999999999999998 557899999977653    11 22345668999999998 9999999999999999


Q ss_pred             eeEEEeccCCCCHHHHHhccC
Q 013018          417 KILVYEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       417 ~~lv~ey~~~GsL~~~L~~~~  437 (451)
                      .++||||+.+|+|.+++.+..
T Consensus        95 ~~ivmEy~~gGdL~~~i~~~g  115 (370)
T KOG0583|consen   95 IYIVMEYCSGGDLFDYIVNKG  115 (370)
T ss_pred             EEEEEEecCCccHHHHHHHcC
Confidence            999999999999999999843

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=98.99  E-value=2.8e-09  Score=100.64  Aligned_cols=101  Identities=21%  Similarity=0.354  Sum_probs=84.5

Q ss_pred             ccccccceecccCceeEEEEEc-CCCcEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEec
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSS-GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  423 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey  423 (451)
                      ++|+..+.||+|+||.||++.. .++..+++|.+.... ......+.+|++.++.++|+|++++.+.+...+..++++||
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~   80 (267)
T cd06610           1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY   80 (267)
T ss_pred             CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence            3577889999999999999994 567899999986442 33457899999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhccCCCCCCchhh
Q 013018          424 VPNKSLDYFLYAQSPKNNNNWIG  446 (451)
Q Consensus       424 ~~~GsL~~~L~~~~~~~~l~W~~  446 (451)
                      +++++|.++++...+...++|.+
T Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~  103 (267)
T cd06610          81 LSGGSLLDIMKSSYPRGGLDEAI  103 (267)
T ss_pred             cCCCcHHHHHHHhcccCCCCHHH
Confidence            99999999998755434455543

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=98.99  E-value=2.1e-09  Score=104.91  Aligned_cols=85  Identities=25%  Similarity=0.291  Sum_probs=72.6

Q ss_pred             ceecccCceeEEEEEc----CCCcEEEEEEeccCC--hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEeccC
Q 013018          352 NKLGEGGFGEVYKGVL----PSGQEIAVKRLSRSS--GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVP  425 (451)
Q Consensus       352 ~~lG~G~fg~V~~~~l----~~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~~  425 (451)
                      +.||+|+||.||++..    ..|+.+|+|.+....  ......+.+|+.++.+++||||+++.+.+...+..++|+||++
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   81 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR   81 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence            6799999999998873    367899999997532  2233567889999999999999999999999999999999999


Q ss_pred             CCCHHHHHhcc
Q 013018          426 NKSLDYFLYAQ  436 (451)
Q Consensus       426 ~GsL~~~L~~~  436 (451)
                      +|+|.+++...
T Consensus        82 ~~~L~~~l~~~   92 (318)
T cd05582          82 GGDLFTRLSKE   92 (318)
T ss_pred             CCcHHHHHHHc
Confidence            99999999764

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=98.99  E-value=1.8e-09  Score=116.40  Aligned_cols=90  Identities=21%  Similarity=0.412  Sum_probs=78.8

Q ss_pred             ccccccceecccCceeEEEEEc-CCCcEEEEEEeccCC---hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEE
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSS---GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  421 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~  421 (451)
                      ++|...++||+|+||.||++.. ..++.||+|++....   ....+.|.+|+.++++++||||+++++++...+..+++|
T Consensus         2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM   81 (932)
T PRK13184          2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM   81 (932)
T ss_pred             CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence            4577889999999999999984 468999999997532   223467999999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhc
Q 013018          422 EFVPNKSLDYFLYA  435 (451)
Q Consensus       422 ey~~~GsL~~~L~~  435 (451)
                      ||+++|+|.++|+.
T Consensus        82 EY~eGGSL~~lL~s   95 (932)
T PRK13184         82 PYIEGYTLKSLLKS   95 (932)
T ss_pred             EcCCCCCHHHHHHH
Confidence            99999999999975

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=98.99  E-value=1e-09  Score=108.73  Aligned_cols=86  Identities=23%  Similarity=0.360  Sum_probs=73.5

Q ss_pred             cccccceecccCceeEEEEE-cCCCcEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEecc
Q 013018          347 NFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSS-GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFV  424 (451)
Q Consensus       347 ~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~  424 (451)
                      +|+..++||+|+||.||++. ..+++.||||.+.... ....+.+.+|++++++++|+||+++++++...+..++|+||+
T Consensus        75 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~  154 (353)
T PLN00034         75 ELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFM  154 (353)
T ss_pred             HHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecC
Confidence            34557899999999999999 4578999999986543 233467999999999999999999999999999999999999


Q ss_pred             CCCCHHHH
Q 013018          425 PNKSLDYF  432 (451)
Q Consensus       425 ~~GsL~~~  432 (451)
                      ++|+|.+.
T Consensus       155 ~~~~L~~~  162 (353)
T PLN00034        155 DGGSLEGT  162 (353)
T ss_pred             CCCccccc
Confidence            99998653

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=98.99  E-value=1.8e-09  Score=102.40  Aligned_cols=87  Identities=31%  Similarity=0.481  Sum_probs=72.8

Q ss_pred             ceecccCceeEEEEEcCC---CcEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEeccCCC
Q 013018          352 NKLGEGGFGEVYKGVLPS---GQEIAVKRLSRSS-GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNK  427 (451)
Q Consensus       352 ~~lG~G~fg~V~~~~l~~---g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~~~G  427 (451)
                      ++||+|+||.||+|...+   ...+++|.+.... ......|.+|+.+++.++|+||++++|.+......++|+||+++|
T Consensus         1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g   80 (269)
T cd05042           1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLG   80 (269)
T ss_pred             CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCC
Confidence            368999999999997533   3568888876443 333467899999999999999999999999889999999999999


Q ss_pred             CHHHHHhccCC
Q 013018          428 SLDYFLYAQSP  438 (451)
Q Consensus       428 sL~~~L~~~~~  438 (451)
                      +|.++|+..+.
T Consensus        81 ~L~~~l~~~~~   91 (269)
T cd05042          81 DLKNYLRSNRG   91 (269)
T ss_pred             cHHHHHHhccc
Confidence            99999987543

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=98.98  E-value=2.3e-09  Score=101.98  Aligned_cols=90  Identities=21%  Similarity=0.367  Sum_probs=78.7

Q ss_pred             cccccceecccCceeEEEEEc-CCCcEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEecc
Q 013018          347 NFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSS-GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFV  424 (451)
Q Consensus       347 ~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~  424 (451)
                      +|+..+.||.|++|.||++.. .+++.+++|.+.... ......+.+|+.++++++|+|++++.+.+......++|+||+
T Consensus         2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~   81 (274)
T cd06609           2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYC   81 (274)
T ss_pred             hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEee
Confidence            466778999999999999994 468899999987543 344567899999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcc
Q 013018          425 PNKSLDYFLYAQ  436 (451)
Q Consensus       425 ~~GsL~~~L~~~  436 (451)
                      ++++|.++++..
T Consensus        82 ~~~~L~~~~~~~   93 (274)
T cd06609          82 GGGSCLDLLKPG   93 (274)
T ss_pred             CCCcHHHHHhhc
Confidence            999999999864

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=98.98  E-value=3.1e-09  Score=101.34  Aligned_cols=88  Identities=20%  Similarity=0.400  Sum_probs=76.6

Q ss_pred             ccccceecccCceeEEEEEc-CCCcEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEeccC
Q 013018          348 FSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSS-GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVP  425 (451)
Q Consensus       348 ~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~~  425 (451)
                      |+..+.||+|+||.||++.. .+++.+|+|.+.... ......+.+|+.++.+++||||+++++.+..++..++|+||++
T Consensus         6 ~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~   85 (277)
T cd06641           6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLG   85 (277)
T ss_pred             hhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeCC
Confidence            56678999999999999984 568899999886442 2334678999999999999999999999999999999999999


Q ss_pred             CCCHHHHHhc
Q 013018          426 NKSLDYFLYA  435 (451)
Q Consensus       426 ~GsL~~~L~~  435 (451)
                      +|+|.+++..
T Consensus        86 ~~~l~~~i~~   95 (277)
T cd06641          86 GGSALDLLEP   95 (277)
T ss_pred             CCcHHHHHhc
Confidence            9999999975

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=98.98  E-value=1.6e-09  Score=105.53  Aligned_cols=95  Identities=25%  Similarity=0.463  Sum_probs=78.9

Q ss_pred             HhhccccccceecccCceeEEEEEc--------CCCcEEEEEEeccC-ChhhHHHHHHHHHHHhcC-CCCCcccceeEEE
Q 013018          343 VATNNFSTDNKLGEGGFGEVYKGVL--------PSGQEIAVKRLSRS-SGQGGQEFKNEVVLVAKL-QHRNLVRLLGFCL  412 (451)
Q Consensus       343 ~~~~~~~~~~~lG~G~fg~V~~~~l--------~~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~  412 (451)
                      ...++|...++||+|+||.||++..        .....+++|.+... ......++.+|+.++.++ +||||+++++++.
T Consensus         9 ~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~   88 (314)
T cd05099           9 FPRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCT   88 (314)
T ss_pred             ccHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEc
Confidence            3456678889999999999999973        12457899988754 233456799999999999 6999999999999


Q ss_pred             eCceeeEEEeccCCCCHHHHHhccC
Q 013018          413 EGEEKILVYEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       413 ~~~~~~lv~ey~~~GsL~~~L~~~~  437 (451)
                      .....++++||+++|+|.++++...
T Consensus        89 ~~~~~~lv~e~~~~g~L~~~i~~~~  113 (314)
T cd05099          89 QEGPLYVIVEYAAKGNLREFLRARR  113 (314)
T ss_pred             cCCceEEEEecCCCCcHHHHHHhcC
Confidence            8888999999999999999998643

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=98.98  E-value=2.3e-09  Score=102.60  Aligned_cols=94  Identities=26%  Similarity=0.300  Sum_probs=75.8

Q ss_pred             ecccCceeEEEEE-cCCCcEEEEEEeccCCh---hhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEeccCCCCH
Q 013018          354 LGEGGFGEVYKGV-LPSGQEIAVKRLSRSSG---QGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSL  429 (451)
Q Consensus       354 lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~~~GsL  429 (451)
                      ||+|+||.||++. ..+++.+|+|.+.....   +..+.+..|+.++++++|+||+++.+.+......++||||+++|+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L   80 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL   80 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence            6999999999998 45788999999864321   2235678999999999999999999999888899999999999999


Q ss_pred             HHHHhccCC-CCCCchhhh
Q 013018          430 DYFLYAQSP-KNNNNWIGQ  447 (451)
Q Consensus       430 ~~~L~~~~~-~~~l~W~~r  447 (451)
                      .+++..... ...++|.+.
T Consensus        81 ~~~~~~~~~~~~~l~~~~~   99 (280)
T cd05608          81 RYHIYNVDEENPGFPEPRA   99 (280)
T ss_pred             HHHHHhccccCCCCCHHHH
Confidence            998865332 234566543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=98.98  E-value=2.7e-09  Score=104.71  Aligned_cols=85  Identities=20%  Similarity=0.241  Sum_probs=72.7

Q ss_pred             ceecccCceeEEEEEc-CCCcEEEEEEeccCC---hhhHHHHHHHHHHHhcC-CCCCcccceeEEEeCceeeEEEeccCC
Q 013018          352 NKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSS---GQGGQEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKILVYEFVPN  426 (451)
Q Consensus       352 ~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lv~ey~~~  426 (451)
                      ++||+|+||.||++.. .+++.+|+|.+....   ......+.+|..++.++ +||||+++.+++...+..+|||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~   80 (329)
T cd05588           1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG   80 (329)
T ss_pred             CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence            4799999999999984 568899999997532   22345688999999998 799999999999999999999999999


Q ss_pred             CCHHHHHhcc
Q 013018          427 KSLDYFLYAQ  436 (451)
Q Consensus       427 GsL~~~L~~~  436 (451)
                      |+|.+++...
T Consensus        81 g~L~~~~~~~   90 (329)
T cd05588          81 GDLMFHMQRQ   90 (329)
T ss_pred             CCHHHHHHHc
Confidence            9999998754

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=98.98  E-value=1.9e-09  Score=103.92  Aligned_cols=93  Identities=28%  Similarity=0.510  Sum_probs=78.5

Q ss_pred             hccccccceecccCceeEEEEEcC-----------------CCcEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccc
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGVLP-----------------SGQEIAVKRLSRS-SGQGGQEFKNEVVLVAKLQHRNLVR  406 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~l~-----------------~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~  406 (451)
                      .++|+..+.||+|+||.||++...                 ++..+|+|.+... ......+|.+|+.++.+++|+||++
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~   83 (296)
T cd05095           4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIR   83 (296)
T ss_pred             hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcce
Confidence            356888899999999999997532                 2346899998754 3334578999999999999999999


Q ss_pred             ceeEEEeCceeeEEEeccCCCCHHHHHhccC
Q 013018          407 LLGFCLEGEEKILVYEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       407 l~g~~~~~~~~~lv~ey~~~GsL~~~L~~~~  437 (451)
                      +++++...+..++++||+++|+|.+++....
T Consensus        84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~  114 (296)
T cd05095          84 LLAVCITSDPLCMITEYMENGDLNQFLSRHE  114 (296)
T ss_pred             EEEEEecCCccEEEEEeCCCCcHHHHHHhcC
Confidence            9999999899999999999999999998754

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=98.98  E-value=2.4e-09  Score=102.47  Aligned_cols=100  Identities=33%  Similarity=0.489  Sum_probs=80.9

Q ss_pred             cccccceecccCceeEEEEEc-----CCCcEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCcccceeEEEeC--ceee
Q 013018          347 NFSTDNKLGEGGFGEVYKGVL-----PSGQEIAVKRLSRSS-GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEG--EEKI  418 (451)
Q Consensus       347 ~~~~~~~lG~G~fg~V~~~~l-----~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~--~~~~  418 (451)
                      .|+..+.||+|+||.||.+.+     ..+..|++|.+.... ....+.+.+|+.++++++|||++++.+++...  ...+
T Consensus         5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~   84 (284)
T cd05079           5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIK   84 (284)
T ss_pred             hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceE
Confidence            357788999999999999974     357789999987543 33456899999999999999999999998764  5678


Q ss_pred             EEEeccCCCCHHHHHhccCCCCCCchhhhh
Q 013018          419 LVYEFVPNKSLDYFLYAQSPKNNNNWIGQD  448 (451)
Q Consensus       419 lv~ey~~~GsL~~~L~~~~~~~~l~W~~r~  448 (451)
                      +|+||+++++|.+++....  ..++|.+++
T Consensus        85 lv~e~~~g~~L~~~l~~~~--~~~~~~~~~  112 (284)
T cd05079          85 LIMEFLPSGSLKEYLPRNK--NKINLKQQL  112 (284)
T ss_pred             EEEEccCCCCHHHHHHhcc--CCCCHHHHH
Confidence            9999999999999997543  236666543

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=98.98  E-value=2.4e-09  Score=103.15  Aligned_cols=97  Identities=25%  Similarity=0.356  Sum_probs=80.4

Q ss_pred             ccccceecccCceeEEEEEc-CCCcEEEEEEeccCChh-----hHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEE
Q 013018          348 FSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSGQ-----GGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  421 (451)
Q Consensus       348 ~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~  421 (451)
                      |+..+.||+|+||.||+|.. .+++.|+||.+......     ....+.+|+.++.+++|+||+++++++...+..++|+
T Consensus         2 y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~   81 (298)
T cd07841           2 YEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLVF   81 (298)
T ss_pred             ceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEEE
Confidence            56678999999999999994 46899999999754322     2356788999999999999999999999988999999


Q ss_pred             eccCCCCHHHHHhccCCCCCCchhhh
Q 013018          422 EFVPNKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       422 ey~~~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                      ||+ .|+|.++++...  ..++|...
T Consensus        82 e~~-~~~L~~~i~~~~--~~~~~~~~  104 (298)
T cd07841          82 EFM-ETDLEKVIKDKS--IVLTPADI  104 (298)
T ss_pred             ccc-CCCHHHHHhccC--CCCCHHHH
Confidence            999 999999998644  24666544

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.98  E-value=4.2e-10  Score=111.80  Aligned_cols=92  Identities=27%  Similarity=0.463  Sum_probs=81.1

Q ss_pred             hccccccceecccCceeEEEEE-cCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEec
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  423 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey  423 (451)
                      ...|..-.+||+|+-|.||.+. ...++.||||++........+-+++|+.+|+..+|+|||.++..+...+++|+||||
T Consensus       272 ~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEy  351 (550)
T KOG0578|consen  272 RSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEY  351 (550)
T ss_pred             hhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEee
Confidence            3446777899999999999998 668899999999877655667789999999999999999999999988999999999


Q ss_pred             cCCCCHHHHHhcc
Q 013018          424 VPNKSLDYFLYAQ  436 (451)
Q Consensus       424 ~~~GsL~~~L~~~  436 (451)
                      |++|+|.+.+...
T Consensus       352 m~ggsLTDvVt~~  364 (550)
T KOG0578|consen  352 MEGGSLTDVVTKT  364 (550)
T ss_pred             cCCCchhhhhhcc
Confidence            9999998877653

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=98.98  E-value=2.1e-09  Score=100.92  Aligned_cols=100  Identities=22%  Similarity=0.312  Sum_probs=82.3

Q ss_pred             cccccceecccCceeEEEEEc-CCCcEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEec
Q 013018          347 NFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRS--SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  423 (451)
Q Consensus       347 ~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey  423 (451)
                      +|+..+.||+|+||.||++.. .+|..+++|.+...  .....+.+.+|+.++++++|+||+++++.+...+..++++||
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~   80 (257)
T cd08225           1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY   80 (257)
T ss_pred             CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence            356778999999999999995 45788999998643  223446788999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhccCCCCCCchhhh
Q 013018          424 VPNKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       424 ~~~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                      +++++|.+++.+... ..++|..+
T Consensus        81 ~~~~~L~~~~~~~~~-~~~~~~~~  103 (257)
T cd08225          81 CDGGDLMKRINRQRG-VLFSEDQI  103 (257)
T ss_pred             CCCCcHHHHHHhccC-CCCCHHHH
Confidence            999999999986432 34566554

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=98.98  E-value=1.5e-09  Score=104.97  Aligned_cols=95  Identities=23%  Similarity=0.452  Sum_probs=79.3

Q ss_pred             HhhccccccceecccCceeEEEEEc--------CCCcEEEEEEeccCC-hhhHHHHHHHHHHHhcC-CCCCcccceeEEE
Q 013018          343 VATNNFSTDNKLGEGGFGEVYKGVL--------PSGQEIAVKRLSRSS-GQGGQEFKNEVVLVAKL-QHRNLVRLLGFCL  412 (451)
Q Consensus       343 ~~~~~~~~~~~lG~G~fg~V~~~~l--------~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~  412 (451)
                      ...++|...+.||+|+||.||++..        ..+..+++|.+.... .....++.+|+.++..+ +||||+++++.+.
T Consensus        12 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~   91 (304)
T cd05101          12 FSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT   91 (304)
T ss_pred             ccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEe
Confidence            3455677889999999999999973        124579999886542 34457899999999999 8999999999999


Q ss_pred             eCceeeEEEeccCCCCHHHHHhccC
Q 013018          413 EGEEKILVYEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       413 ~~~~~~lv~ey~~~GsL~~~L~~~~  437 (451)
                      .....++++||+++|+|.++|...+
T Consensus        92 ~~~~~~lv~e~~~~~~L~~~l~~~~  116 (304)
T cd05101          92 QDGPLYVIVEYASKGNLREYLRARR  116 (304)
T ss_pred             cCCceEEEEecCCCCcHHHHHHhcC
Confidence            9889999999999999999998754

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=98.98  E-value=2.8e-09  Score=103.20  Aligned_cols=91  Identities=18%  Similarity=0.215  Sum_probs=78.5

Q ss_pred             cccccceecccCceeEEEEEc-CCCcEEEEEEeccCC---hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEe
Q 013018          347 NFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSS---GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  422 (451)
Q Consensus       347 ~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  422 (451)
                      +|+..+.||+|+||.||++.. ..++.|++|.+....   ......+.+|+.+++.++||||+++++.+..++..++|+|
T Consensus         2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e   81 (305)
T cd05609           2 DFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVME   81 (305)
T ss_pred             CceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEe
Confidence            577789999999999999994 467899999987543   2234678899999999999999999999998889999999


Q ss_pred             ccCCCCHHHHHhccC
Q 013018          423 FVPNKSLDYFLYAQS  437 (451)
Q Consensus       423 y~~~GsL~~~L~~~~  437 (451)
                      |+++|+|.++|+...
T Consensus        82 ~~~g~~L~~~l~~~~   96 (305)
T cd05609          82 YVEGGDCATLLKNIG   96 (305)
T ss_pred             cCCCCcHHHHHHHcC
Confidence            999999999997643

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=98.98  E-value=2.2e-09  Score=104.01  Aligned_cols=93  Identities=31%  Similarity=0.544  Sum_probs=77.3

Q ss_pred             hccccccceecccCceeEEEEEcC-CCc--EEEEEEeccC-ChhhHHHHHHHHHHHhcC-CCCCcccceeEEEeCceeeE
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGVLP-SGQ--EIAVKRLSRS-SGQGGQEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKIL  419 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~l~-~g~--~vavK~l~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~l  419 (451)
                      .++|+..+.||+|+||.||++... ++.  .+++|.+... .......+.+|+.++.++ +|+||+++.+++...+..++
T Consensus         6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~l   85 (303)
T cd05088           6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL   85 (303)
T ss_pred             hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceE
Confidence            346777899999999999999953 454  4577777643 233456789999999999 89999999999998889999


Q ss_pred             EEeccCCCCHHHHHhccC
Q 013018          420 VYEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       420 v~ey~~~GsL~~~L~~~~  437 (451)
                      |+||+++|+|.++|+...
T Consensus        86 v~e~~~~~~L~~~l~~~~  103 (303)
T cd05088          86 AIEYAPHGNLLDFLRKSR  103 (303)
T ss_pred             EEEeCCCCcHHHHHHhcc
Confidence            999999999999998643

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=98.98  E-value=3e-09  Score=102.23  Aligned_cols=91  Identities=30%  Similarity=0.360  Sum_probs=78.8

Q ss_pred             cccccceecccCceeEEEEEc-CCCcEEEEEEeccCC---hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEe
Q 013018          347 NFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSS---GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  422 (451)
Q Consensus       347 ~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  422 (451)
                      +|+..+.||+|+||.||++.. .+++.+++|.+....   ....+.+.+|++++++++||||+++++.+......++|+|
T Consensus         2 ~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e   81 (290)
T cd05580           2 DFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVME   81 (290)
T ss_pred             ceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEEe
Confidence            577789999999999999994 468999999986432   2334678999999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhccC
Q 013018          423 FVPNKSLDYFLYAQS  437 (451)
Q Consensus       423 y~~~GsL~~~L~~~~  437 (451)
                      |+++|+|.++++...
T Consensus        82 ~~~~~~L~~~~~~~~   96 (290)
T cd05580          82 YVPGGELFSHLRKSG   96 (290)
T ss_pred             cCCCCCHHHHHHHcC
Confidence            999999999998653

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=98.97  E-value=2.3e-09  Score=102.75  Aligned_cols=88  Identities=23%  Similarity=0.341  Sum_probs=74.6

Q ss_pred             cccccceecccCceeEEEEEc-CCCcEEEEEEeccCC--hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEec
Q 013018          347 NFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSS--GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  423 (451)
Q Consensus       347 ~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey  423 (451)
                      +|+..+.||+|+||.||++.. .+++.+|+|++....  ....+.+.+|+.++.+++||||+++.+++...+..++|+||
T Consensus         2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (287)
T cd07848           2 KFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFEY   81 (287)
T ss_pred             CceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEec
Confidence            577889999999999999995 467899999987542  23346788999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHh
Q 013018          424 VPNKSLDYFLY  434 (451)
Q Consensus       424 ~~~GsL~~~L~  434 (451)
                      ++++.|..+.+
T Consensus        82 ~~~~~l~~~~~   92 (287)
T cd07848          82 VEKNMLELLEE   92 (287)
T ss_pred             CCCCHHHHHHh
Confidence            99887765544

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=98.97  E-value=2.2e-09  Score=101.00  Aligned_cols=94  Identities=31%  Similarity=0.399  Sum_probs=78.4

Q ss_pred             ceecccCceeEEEEEcCC--C--cEEEEEEeccCCh-hhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEeccCC
Q 013018          352 NKLGEGGFGEVYKGVLPS--G--QEIAVKRLSRSSG-QGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPN  426 (451)
Q Consensus       352 ~~lG~G~fg~V~~~~l~~--g--~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~~~  426 (451)
                      ++||+|++|.||++....  +  ..++||.+..... ...+++.+|+.++++++||||+++++.+.. ...++++||+++
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~   79 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL   79 (257)
T ss_pred             CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence            468999999999998533  3  3689999987654 556789999999999999999999999887 888999999999


Q ss_pred             CCHHHHHhccCCCCCCchhhh
Q 013018          427 KSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       427 GsL~~~L~~~~~~~~l~W~~r  447 (451)
                      |+|.+++.+... ..++|...
T Consensus        80 ~~L~~~l~~~~~-~~~~~~~~   99 (257)
T cd05040          80 GSLLDRLRKDAL-GHFLISTL   99 (257)
T ss_pred             CcHHHHHHhccc-ccCcHHHH
Confidence            999999987553 44666654

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=98.97  E-value=3.4e-09  Score=99.43  Aligned_cols=99  Identities=17%  Similarity=0.262  Sum_probs=81.8

Q ss_pred             cccccceecccCceeEEEEEc-CCCcEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEec
Q 013018          347 NFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRS--SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  423 (451)
Q Consensus       347 ~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey  423 (451)
                      +|...+.||+|+||.||++.. .+++.+++|.+...  ..+....+.+|+.++++++|||++++++.....+..++|+||
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08220           1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY   80 (256)
T ss_pred             CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence            356778999999999999984 57889999998654  233457899999999999999999999998888899999999


Q ss_pred             cCCCCHHHHHhccCCCCCCchhh
Q 013018          424 VPNKSLDYFLYAQSPKNNNNWIG  446 (451)
Q Consensus       424 ~~~GsL~~~L~~~~~~~~l~W~~  446 (451)
                      +++++|.++++.... ..+++.+
T Consensus        81 ~~~~~L~~~~~~~~~-~~~~~~~  102 (256)
T cd08220          81 APGGTLAEYIQKRCN-SLLDEDT  102 (256)
T ss_pred             CCCCCHHHHHHHhcc-cCCCHHH
Confidence            999999999986432 3355544

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=98.97  E-value=2.3e-09  Score=101.83  Aligned_cols=89  Identities=26%  Similarity=0.472  Sum_probs=75.2

Q ss_pred             ccccceecccCceeEEEEE-cCCCcEEEEEEeccCCh----------hhHHHHHHHHHHHhcCCCCCcccceeEEEeCce
Q 013018          348 FSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSG----------QGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEE  416 (451)
Q Consensus       348 ~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~----------~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~  416 (451)
                      +...+.||+|+||.||+|. ..+++.+++|.+.....          ...+.+.+|+.++.+++|+|++++++++...+.
T Consensus         3 ~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   82 (272)
T cd06629           3 WVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEEY   82 (272)
T ss_pred             eeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCCc
Confidence            4567899999999999998 45688999998753211          012468899999999999999999999999999


Q ss_pred             eeEEEeccCCCCHHHHHhcc
Q 013018          417 KILVYEFVPNKSLDYFLYAQ  436 (451)
Q Consensus       417 ~~lv~ey~~~GsL~~~L~~~  436 (451)
                      .++|+||+++|+|.++++..
T Consensus        83 ~~lv~e~~~~~~L~~~l~~~  102 (272)
T cd06629          83 LSIFLEYVPGGSIGSCLRTY  102 (272)
T ss_pred             eEEEEecCCCCcHHHHHhhc
Confidence            99999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=98.97  E-value=1.8e-09  Score=106.10  Aligned_cols=94  Identities=23%  Similarity=0.432  Sum_probs=77.9

Q ss_pred             hhccccccceecccCceeEEEEEcC--------CCcEEEEEEeccCC-hhhHHHHHHHHHHHhcC-CCCCcccceeEEEe
Q 013018          344 ATNNFSTDNKLGEGGFGEVYKGVLP--------SGQEIAVKRLSRSS-GQGGQEFKNEVVLVAKL-QHRNLVRLLGFCLE  413 (451)
Q Consensus       344 ~~~~~~~~~~lG~G~fg~V~~~~l~--------~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~  413 (451)
                      ...+|...+.||+|+||.||++...        .+..+++|.+.... ....+++.+|+.++.++ +||||+++++.+..
T Consensus        10 ~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~   89 (334)
T cd05100          10 SRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ   89 (334)
T ss_pred             CHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEcc
Confidence            3445778899999999999999731        12368999887542 33457899999999999 79999999999998


Q ss_pred             CceeeEEEeccCCCCHHHHHhccC
Q 013018          414 GEEKILVYEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       414 ~~~~~lv~ey~~~GsL~~~L~~~~  437 (451)
                      .+..++++||+++|+|.++|....
T Consensus        90 ~~~~~lv~e~~~~g~L~~~l~~~~  113 (334)
T cd05100          90 DGPLYVLVEYASKGNLREYLRARR  113 (334)
T ss_pred             CCceEEEEecCCCCcHHHHHHhcC
Confidence            889999999999999999998643

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=98.97  E-value=2.9e-09  Score=102.10  Aligned_cols=99  Identities=24%  Similarity=0.324  Sum_probs=80.1

Q ss_pred             ccccceecccCceeEEEEEc-CCCcEEEEEEeccCC---hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEec
Q 013018          348 FSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSS---GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  423 (451)
Q Consensus       348 ~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey  423 (451)
                      |...+.||+|+||.||++.. .+++.+|+|.+....   ......+.+|+.++.+++|+|++++.+.+..++..++++||
T Consensus         2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~   81 (285)
T cd05632           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI   81 (285)
T ss_pred             ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence            45568899999999999984 568899999986442   12234578999999999999999999999888999999999


Q ss_pred             cCCCCHHHHHhccCCCCCCchhhh
Q 013018          424 VPNKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       424 ~~~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                      +++|+|.+++..... ..++|...
T Consensus        82 ~~~~~L~~~~~~~~~-~~~~~~~~  104 (285)
T cd05632          82 MNGGDLKFHIYNMGN-PGFEEERA  104 (285)
T ss_pred             ccCccHHHHHHHhcC-CCCCHHHH
Confidence            999999999876432 23666543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=98.97  E-value=2.3e-09  Score=100.74  Aligned_cols=98  Identities=28%  Similarity=0.475  Sum_probs=81.8

Q ss_pred             ccccccceecccCceeEEEEEcCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEeccC
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVP  425 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~~  425 (451)
                      .+|+..+.||+|+||.||++...++..+++|.+.... ....+|.+|+.++++++|||++++++.+......++++||++
T Consensus         4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~   82 (256)
T cd05112           4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGA-MSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFME   82 (256)
T ss_pred             hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCC-CCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCC
Confidence            3567788999999999999997678899999886442 234679999999999999999999999988889999999999


Q ss_pred             CCCHHHHHhccCCCCCCchhh
Q 013018          426 NKSLDYFLYAQSPKNNNNWIG  446 (451)
Q Consensus       426 ~GsL~~~L~~~~~~~~l~W~~  446 (451)
                      +|+|.++++....  .++|..
T Consensus        83 ~~~L~~~~~~~~~--~~~~~~  101 (256)
T cd05112          83 HGCLSDYLRAQRG--KFSQET  101 (256)
T ss_pred             CCcHHHHHHhCcc--CCCHHH
Confidence            9999999986432  345543

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=98.97  E-value=2.7e-09  Score=102.70  Aligned_cols=93  Identities=30%  Similarity=0.472  Sum_probs=78.8

Q ss_pred             hccccccceecccCceeEEEEEcCC-----------------CcEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCccc
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGVLPS-----------------GQEIAVKRLSRSS-GQGGQEFKNEVVLVAKLQHRNLVR  406 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~l~~-----------------g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~  406 (451)
                      ..+|...++||+|+||.||++....                 +..|++|.+.... ....+++.+|+.++.+++||||++
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~   83 (296)
T cd05051           4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR   83 (296)
T ss_pred             hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence            3467788999999999999987432                 2458999987543 344578999999999999999999


Q ss_pred             ceeEEEeCceeeEEEeccCCCCHHHHHhccC
Q 013018          407 LLGFCLEGEEKILVYEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       407 l~g~~~~~~~~~lv~ey~~~GsL~~~L~~~~  437 (451)
                      +++++...+..++++||+++++|.++|+...
T Consensus        84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~  114 (296)
T cd05051          84 LLGVCTVDPPLCMIMEYMENGDLNQFLQKHV  114 (296)
T ss_pred             EEEEEecCCCcEEEEecCCCCCHHHHHHhcc
Confidence            9999998889999999999999999998754

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=98.97  E-value=1.7e-09  Score=102.70  Aligned_cols=101  Identities=25%  Similarity=0.419  Sum_probs=80.7

Q ss_pred             hccccccceecccCceeEEEEEcCC----CcEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeE
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGVLPS----GQEIAVKRLSRSS-GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKIL  419 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~l~~----g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l  419 (451)
                      .+++...+.||+|+||.||+|...+    ...|+||...... .+..+.+.+|+.++++++||||+++++++.. +..++
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~l   83 (270)
T cd05056           5 REDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWI   83 (270)
T ss_pred             hhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEE
Confidence            3457778999999999999998533    2468999887554 4455789999999999999999999998764 56789


Q ss_pred             EEeccCCCCHHHHHhccCCCCCCchhhhh
Q 013018          420 VYEFVPNKSLDYFLYAQSPKNNNNWIGQD  448 (451)
Q Consensus       420 v~ey~~~GsL~~~L~~~~~~~~l~W~~r~  448 (451)
                      |+||+++|+|.+++....  ..++|.+++
T Consensus        84 v~e~~~~~~L~~~l~~~~--~~~~~~~~~  110 (270)
T cd05056          84 VMELAPLGELRSYLQVNK--YSLDLASLI  110 (270)
T ss_pred             EEEcCCCCcHHHHHHhCC--CCCCHHHHH
Confidence            999999999999998643  236676553

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=98.97  E-value=2.6e-09  Score=104.44  Aligned_cols=86  Identities=23%  Similarity=0.382  Sum_probs=73.1

Q ss_pred             ceecccCceeEEEEEc----CCCcEEEEEEeccCC----hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEec
Q 013018          352 NKLGEGGFGEVYKGVL----PSGQEIAVKRLSRSS----GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  423 (451)
Q Consensus       352 ~~lG~G~fg~V~~~~l----~~g~~vavK~l~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey  423 (451)
                      +.||+|+||.||++..    ..++.+|||.+....    ......+.+|+.++.+++||||+++++.+...+..++||||
T Consensus         2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~   81 (323)
T cd05584           2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY   81 (323)
T ss_pred             ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence            6899999999999984    357899999986431    22235678999999999999999999999998999999999


Q ss_pred             cCCCCHHHHHhccC
Q 013018          424 VPNKSLDYFLYAQS  437 (451)
Q Consensus       424 ~~~GsL~~~L~~~~  437 (451)
                      +++|+|.++++...
T Consensus        82 ~~~~~L~~~~~~~~   95 (323)
T cd05584          82 LSGGELFMHLEREG   95 (323)
T ss_pred             CCCchHHHHHHHcC
Confidence            99999999997643

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=98.97  E-value=3.4e-09  Score=101.28  Aligned_cols=87  Identities=22%  Similarity=0.317  Sum_probs=75.4

Q ss_pred             cccccceecccCceeEEEEE-cCCCcEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEecc
Q 013018          347 NFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRS-SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFV  424 (451)
Q Consensus       347 ~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~  424 (451)
                      +|+..++||+|+||.||++. ..++..+++|.+... ......++.+|+.++.+++||||+++++.+...+..++|+||+
T Consensus         2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   81 (279)
T cd06619           2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFM   81 (279)
T ss_pred             cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecC
Confidence            46677899999999999998 467889999998654 3334467999999999999999999999999999999999999


Q ss_pred             CCCCHHHHH
Q 013018          425 PNKSLDYFL  433 (451)
Q Consensus       425 ~~GsL~~~L  433 (451)
                      ++|+|..+.
T Consensus        82 ~~~~l~~~~   90 (279)
T cd06619          82 DGGSLDVYR   90 (279)
T ss_pred             CCCChHHhh
Confidence            999997653

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=98.97  E-value=3.6e-09  Score=99.48  Aligned_cols=91  Identities=23%  Similarity=0.360  Sum_probs=78.6

Q ss_pred             cccccceecccCceeEEEEE-cCCCcEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEec
Q 013018          347 NFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRS--SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  423 (451)
Q Consensus       347 ~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey  423 (451)
                      +|+..+.||+|+||.+|++. ..+++.+++|.+...  ......++.+|+.++++++||||+++.+.+...+..++|+||
T Consensus         1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08218           1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY   80 (256)
T ss_pred             CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence            36678999999999999998 457889999998643  233456899999999999999999999999989999999999


Q ss_pred             cCCCCHHHHHhccC
Q 013018          424 VPNKSLDYFLYAQS  437 (451)
Q Consensus       424 ~~~GsL~~~L~~~~  437 (451)
                      +++++|.+++....
T Consensus        81 ~~~~~l~~~~~~~~   94 (256)
T cd08218          81 CEGGDLYKKINAQR   94 (256)
T ss_pred             CCCCcHHHHHHhcc
Confidence            99999999998643

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=98.96  E-value=2.6e-09  Score=100.33  Aligned_cols=98  Identities=22%  Similarity=0.350  Sum_probs=83.2

Q ss_pred             ccccccceecccCceeEEEEEcC-CCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEecc
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFV  424 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~  424 (451)
                      ++|+..+.||+|+||.||++... ++..+++|.+.....  .+++.+|++++++++|+||+++++.+...+..++++||+
T Consensus         3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~   80 (256)
T cd06612           3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYC   80 (256)
T ss_pred             ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecC
Confidence            56788899999999999999964 478999999865432  578999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhccCCCCCCchhhh
Q 013018          425 PNKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       425 ~~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                      ++++|.+++....  ..++|...
T Consensus        81 ~~~~L~~~l~~~~--~~l~~~~~  101 (256)
T cd06612          81 GAGSVSDIMKITN--KTLTEEEI  101 (256)
T ss_pred             CCCcHHHHHHhCc--cCCCHHHH
Confidence            9999999997533  34566543

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=98.96  E-value=3.3e-09  Score=101.91  Aligned_cols=89  Identities=27%  Similarity=0.446  Sum_probs=75.4

Q ss_pred             ccccceecccCceeEEEEEcC------CCcEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEE
Q 013018          348 FSTDNKLGEGGFGEVYKGVLP------SGQEIAVKRLSRSS-GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILV  420 (451)
Q Consensus       348 ~~~~~~lG~G~fg~V~~~~l~------~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv  420 (451)
                      |...+.||+|+||.||+|...      ....+++|.+.... ....+.+.+|+.+++.++||||+++++.+...+..+++
T Consensus         2 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv   81 (290)
T cd05045           2 LVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLI   81 (290)
T ss_pred             ccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEEE
Confidence            566789999999999999842      23578998886543 33456799999999999999999999999988899999


Q ss_pred             EeccCCCCHHHHHhcc
Q 013018          421 YEFVPNKSLDYFLYAQ  436 (451)
Q Consensus       421 ~ey~~~GsL~~~L~~~  436 (451)
                      +||+++|+|.++|...
T Consensus        82 ~e~~~~~~L~~~l~~~   97 (290)
T cd05045          82 VEYAKYGSLRSFLRES   97 (290)
T ss_pred             EEecCCCCHHHHHHhc
Confidence            9999999999999753

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=98.96  E-value=3.8e-09  Score=99.60  Aligned_cols=89  Identities=28%  Similarity=0.488  Sum_probs=78.7

Q ss_pred             ccccceecccCceeEEEEEc-CCCcEEEEEEeccCCh--hhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEecc
Q 013018          348 FSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSG--QGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFV  424 (451)
Q Consensus       348 ~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~  424 (451)
                      |+..+.||+|+||.||++.. .++..+++|.+.....  ...+.+.+|+.++++++|+||+++++.+...+..++|+||+
T Consensus         2 y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~~   81 (264)
T cd06626           2 WQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEYC   81 (264)
T ss_pred             ceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEecC
Confidence            56678999999999999984 4788999999875543  35578999999999999999999999998889999999999


Q ss_pred             CCCCHHHHHhcc
Q 013018          425 PNKSLDYFLYAQ  436 (451)
Q Consensus       425 ~~GsL~~~L~~~  436 (451)
                      ++++|.++++..
T Consensus        82 ~~~~L~~~~~~~   93 (264)
T cd06626          82 SGGTLEELLEHG   93 (264)
T ss_pred             CCCcHHHHHhhc
Confidence            999999999864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=98.96  E-value=2.6e-09  Score=103.37  Aligned_cols=91  Identities=27%  Similarity=0.404  Sum_probs=77.0

Q ss_pred             hccccccceecccCceeEEEEEc-CCCcEEEEEEeccCCh-hhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEe
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSG-QGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  422 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  422 (451)
                      .++|...+.||+|+||.||++.. .+++.+|||.+..... .....+.+|+.++++++||||+++.+++...+..++|+|
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   83 (303)
T cd07869           4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE   83 (303)
T ss_pred             cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence            35688889999999999999995 4788999999875432 223567899999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhcc
Q 013018          423 FVPNKSLDYFLYAQ  436 (451)
Q Consensus       423 y~~~GsL~~~L~~~  436 (451)
                      |++ ++|.+++..+
T Consensus        84 ~~~-~~l~~~~~~~   96 (303)
T cd07869          84 YVH-TDLCQYMDKH   96 (303)
T ss_pred             CCC-cCHHHHHHhC
Confidence            995 6888888754

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=98.96  E-value=3.4e-09  Score=101.10  Aligned_cols=99  Identities=29%  Similarity=0.494  Sum_probs=80.0

Q ss_pred             ccccccceecccCceeEEEEEcC-CCc----EEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeE
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVLP-SGQ----EIAVKRLSRSS-GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKIL  419 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l~-~g~----~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l  419 (451)
                      .+|...+.||+|+||.||+|... +|+    .+++|.+.... .....++.+|+.++.+++|+||+++++++.. +..++
T Consensus         7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~   85 (279)
T cd05057           7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQL   85 (279)
T ss_pred             HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEE
Confidence            45677899999999999999853 333    58999887553 3345789999999999999999999999987 78899


Q ss_pred             EEeccCCCCHHHHHhccCCCCCCchhhh
Q 013018          420 VYEFVPNKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       420 v~ey~~~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                      ++||+++|+|.++|+.+..  .++|...
T Consensus        86 v~e~~~~g~L~~~l~~~~~--~~~~~~~  111 (279)
T cd05057          86 ITQLMPLGCLLDYVRNHKD--NIGSQYL  111 (279)
T ss_pred             EEecCCCCcHHHHHHhccC--CCCHHHH
Confidence            9999999999999986533  2555443

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=98.96  E-value=3.1e-09  Score=104.01  Aligned_cols=95  Identities=20%  Similarity=0.239  Sum_probs=75.0

Q ss_pred             ccccceecccCceeEEEEEc-CCCcEEEEEEeccCC---hhhHHHHHHHHHHH---hcCCCCCcccceeEEEeCceeeEE
Q 013018          348 FSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSS---GQGGQEFKNEVVLV---AKLQHRNLVRLLGFCLEGEEKILV  420 (451)
Q Consensus       348 ~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~---~~~~~~~~~E~~~l---~~l~h~niv~l~g~~~~~~~~~lv  420 (451)
                      |...+.||+|+||.||++.. .+++.||||.+....   ....+.+.+|+.++   .+++||||+++++++...+..++|
T Consensus         1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv   80 (324)
T cd05589           1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV   80 (324)
T ss_pred             CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence            34578999999999999984 568999999997432   22335566776554   567899999999999999999999


Q ss_pred             EeccCCCCHHHHHhccCCCCCCchhh
Q 013018          421 YEFVPNKSLDYFLYAQSPKNNNNWIG  446 (451)
Q Consensus       421 ~ey~~~GsL~~~L~~~~~~~~l~W~~  446 (451)
                      |||+++|+|..+++..    .++|.+
T Consensus        81 ~E~~~~~~L~~~~~~~----~l~~~~  102 (324)
T cd05589          81 MEYAAGGDLMMHIHTD----VFSEPR  102 (324)
T ss_pred             EcCCCCCcHHHHhhcC----CCCHHH
Confidence            9999999999988753    355544

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=98.96  E-value=2.1e-09  Score=101.48  Aligned_cols=92  Identities=28%  Similarity=0.458  Sum_probs=73.2

Q ss_pred             eecccCceeEEEEEcC---CCcEEEEEEeccCCh-hhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEeccCCCC
Q 013018          353 KLGEGGFGEVYKGVLP---SGQEIAVKRLSRSSG-QGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKS  428 (451)
Q Consensus       353 ~lG~G~fg~V~~~~l~---~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~~~Gs  428 (451)
                      .||+|+||.||+|.+.   .+..||+|.+..... ...++|.+|+.++++++|+||+++++++. .+..++|+||+++|+
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~   80 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGP   80 (257)
T ss_pred             ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCC
Confidence            4899999999999753   355799999876533 33467999999999999999999999875 457889999999999


Q ss_pred             HHHHHhccCCCCCCchhhh
Q 013018          429 LDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       429 L~~~L~~~~~~~~l~W~~r  447 (451)
                      |.+++.....  .++|.+.
T Consensus        81 L~~~l~~~~~--~~~~~~~   97 (257)
T cd05115          81 LNKFLSGKKD--EITVSNV   97 (257)
T ss_pred             HHHHHHhCCC--CCCHHHH
Confidence            9999986432  3555443

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=98.96  E-value=2.4e-09  Score=102.81  Aligned_cols=91  Identities=25%  Similarity=0.372  Sum_probs=76.7

Q ss_pred             ccccccceecccCceeEEEEEc-CCCcEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEec
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSS-GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  423 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey  423 (451)
                      ++|...++||+|+||.||++.. .++..||+|.+.... ......+.+|+.++++++||||++++++....+..++|+||
T Consensus         5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   84 (288)
T cd07871           5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY   84 (288)
T ss_pred             ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence            4577789999999999999984 468899999986442 22345788999999999999999999999888889999999


Q ss_pred             cCCCCHHHHHhccC
Q 013018          424 VPNKSLDYFLYAQS  437 (451)
Q Consensus       424 ~~~GsL~~~L~~~~  437 (451)
                      ++ |+|.+++....
T Consensus        85 ~~-~~l~~~l~~~~   97 (288)
T cd07871          85 LD-SDLKQYLDNCG   97 (288)
T ss_pred             CC-cCHHHHHHhcC
Confidence            97 59999987543

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=98.95  E-value=3.6e-09  Score=101.37  Aligned_cols=102  Identities=25%  Similarity=0.365  Sum_probs=86.5

Q ss_pred             hhccccccceecccCceeEEEEEcC-CCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEe
Q 013018          344 ATNNFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  422 (451)
Q Consensus       344 ~~~~~~~~~~lG~G~fg~V~~~~l~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  422 (451)
                      .++.|...+.||+|++|.||++..+ .+..+++|.+..... ..+.+.+|++++.+++|+|++++++.+...+..++++|
T Consensus        17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e   95 (286)
T cd06614          17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVME   95 (286)
T ss_pred             ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEe
Confidence            3455777789999999999999965 688999999976543 45778999999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhccCCCCCCchhhhh
Q 013018          423 FVPNKSLDYFLYAQSPKNNNNWIGQD  448 (451)
Q Consensus       423 y~~~GsL~~~L~~~~~~~~l~W~~r~  448 (451)
                      |+++++|.+++..+.  ..++|.++.
T Consensus        96 ~~~~~~L~~~l~~~~--~~l~~~~~~  119 (286)
T cd06614          96 YMDGGSLTDIITQNF--VRMNEPQIA  119 (286)
T ss_pred             ccCCCcHHHHHHHhc--cCCCHHHHH
Confidence            999999999999754  346776553

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=98.95  E-value=4.6e-09  Score=100.39  Aligned_cols=98  Identities=28%  Similarity=0.403  Sum_probs=80.7

Q ss_pred             ccccceecccCceeEEEEEc-CCCcEEEEEEeccCC--hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEecc
Q 013018          348 FSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSS--GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFV  424 (451)
Q Consensus       348 ~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~  424 (451)
                      |+..+.||+|++|.||++.. .++..+++|.+....  ......+.+|+.++.+++||||+++++.+..+...++|+||+
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~   81 (285)
T cd07861           2 YTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEFL   81 (285)
T ss_pred             ceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEecC
Confidence            56678999999999999995 468899999986432  223467889999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhccCCCCCCchhh
Q 013018          425 PNKSLDYFLYAQSPKNNNNWIG  446 (451)
Q Consensus       425 ~~GsL~~~L~~~~~~~~l~W~~  446 (451)
                      + |+|.+++.....+..+++.+
T Consensus        82 ~-~~l~~~~~~~~~~~~~~~~~  102 (285)
T cd07861          82 S-MDLKKYLDSLPKGQYMDAEL  102 (285)
T ss_pred             C-CCHHHHHhcCCCCCcCCHHH
Confidence            7 69999998655444566544

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=98.95  E-value=3.1e-09  Score=102.56  Aligned_cols=92  Identities=28%  Similarity=0.525  Sum_probs=77.1

Q ss_pred             ccccccceecccCceeEEEEEcCC-Cc--EEEEEEeccC-ChhhHHHHHHHHHHHhcC-CCCCcccceeEEEeCceeeEE
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVLPS-GQ--EIAVKRLSRS-SGQGGQEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKILV  420 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l~~-g~--~vavK~l~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lv  420 (451)
                      ++|+..++||+|+||.||++...+ +.  .+++|.+... .....+.|.+|+.++.++ +||||+++.+++......+++
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv   81 (297)
T cd05089           2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA   81 (297)
T ss_pred             ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence            467788999999999999998643 33  4788888743 334456799999999999 799999999999888889999


Q ss_pred             EeccCCCCHHHHHhccC
Q 013018          421 YEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       421 ~ey~~~GsL~~~L~~~~  437 (451)
                      +||+++|+|.++|+...
T Consensus        82 ~e~~~~~~L~~~l~~~~   98 (297)
T cd05089          82 IEYAPYGNLLDFLRKSR   98 (297)
T ss_pred             EEecCCCcHHHHHHhcc
Confidence            99999999999998643

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=98.95  E-value=3.6e-09  Score=100.87  Aligned_cols=89  Identities=22%  Similarity=0.422  Sum_probs=77.9

Q ss_pred             cccccceecccCceeEEEEEc-CCCcEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEecc
Q 013018          347 NFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSS-GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFV  424 (451)
Q Consensus       347 ~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~  424 (451)
                      .|+..+.||+|+||.||++.. ..+..+++|.+.... ......+.+|+.++.+++|+||+++++.+......++|+||+
T Consensus         5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   84 (277)
T cd06640           5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYL   84 (277)
T ss_pred             hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecC
Confidence            356678899999999999985 468899999987542 344578999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhc
Q 013018          425 PNKSLDYFLYA  435 (451)
Q Consensus       425 ~~GsL~~~L~~  435 (451)
                      ++|+|.++++.
T Consensus        85 ~~~~L~~~i~~   95 (277)
T cd06640          85 GGGSALDLLRA   95 (277)
T ss_pred             CCCcHHHHHhc
Confidence            99999999975

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=98.95  E-value=4.1e-09  Score=99.28  Aligned_cols=92  Identities=22%  Similarity=0.430  Sum_probs=81.5

Q ss_pred             hccccccceecccCceeEEEEEc-CCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEec
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  423 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey  423 (451)
                      .++|+..+.||+|+||.||++.. .++..+++|.+........+.+.+|+.++++++||||+++++.....+..++++||
T Consensus         2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~   81 (262)
T cd06613           2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEY   81 (262)
T ss_pred             ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeC
Confidence            35678889999999999999995 45788999999766555667899999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcc
Q 013018          424 VPNKSLDYFLYAQ  436 (451)
Q Consensus       424 ~~~GsL~~~L~~~  436 (451)
                      +++++|.+++...
T Consensus        82 ~~~~~l~~~~~~~   94 (262)
T cd06613          82 CGGGSLQDIYQVT   94 (262)
T ss_pred             CCCCcHHHHHHhh
Confidence            9999999999864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=98.95  E-value=1.7e-09  Score=106.57  Aligned_cols=94  Identities=23%  Similarity=0.441  Sum_probs=76.9

Q ss_pred             HhhccccccceecccCceeEEEEEc------CCCcEEEEEEeccCC-hhhHHHHHHHHHHHhcC-CCCCcccceeEEEeC
Q 013018          343 VATNNFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRLSRSS-GQGGQEFKNEVVLVAKL-QHRNLVRLLGFCLEG  414 (451)
Q Consensus       343 ~~~~~~~~~~~lG~G~fg~V~~~~l------~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~  414 (451)
                      .+.++|+..++||+|+||.||++..      ..++.||+|++.... ....+.+.+|+.++.++ +|+||+++++.+...
T Consensus         4 ~~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~   83 (337)
T cd05054           4 FPRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKP   83 (337)
T ss_pred             cCHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecC
Confidence            4556788899999999999999963      234789999987543 23346788999999999 899999999988654


Q ss_pred             -ceeeEEEeccCCCCHHHHHhcc
Q 013018          415 -EEKILVYEFVPNKSLDYFLYAQ  436 (451)
Q Consensus       415 -~~~~lv~ey~~~GsL~~~L~~~  436 (451)
                       ...++++||+++|+|.++|+..
T Consensus        84 ~~~~~~v~ey~~~~~L~~~i~~~  106 (337)
T cd05054          84 GGPLMVIVEYCKFGNLSNYLRSK  106 (337)
T ss_pred             CCCEEEEEecCCCCCHHHHHHhc
Confidence             5678999999999999999754

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=98.95  E-value=3.6e-09  Score=99.27  Aligned_cols=99  Identities=38%  Similarity=0.600  Sum_probs=81.4

Q ss_pred             cccceecccCceeEEEEEcCC-----CcEEEEEEeccCChh-hHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEe
Q 013018          349 STDNKLGEGGFGEVYKGVLPS-----GQEIAVKRLSRSSGQ-GGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  422 (451)
Q Consensus       349 ~~~~~lG~G~fg~V~~~~l~~-----g~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  422 (451)
                      +..+.||+|+||.||++....     +..+++|.+...... ..+.+.+|+.++.+++|+||+++++.+...+..++++|
T Consensus         2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e   81 (258)
T smart00219        2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVME   81 (258)
T ss_pred             cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEe
Confidence            456899999999999999543     378999999765433 56789999999999999999999999999899999999


Q ss_pred             ccCCCCHHHHHhccCCCCCCchhhhh
Q 013018          423 FVPNKSLDYFLYAQSPKNNNNWIGQD  448 (451)
Q Consensus       423 y~~~GsL~~~L~~~~~~~~l~W~~r~  448 (451)
                      |+++++|.++++..... .++|.+.+
T Consensus        82 ~~~~~~l~~~~~~~~~~-~~~~~~~~  106 (258)
T smart00219       82 YMEGGDLLDYLRKNRPK-ELSLSDLL  106 (258)
T ss_pred             ccCCCCHHHHHHhhhhc-cCCHHHHH
Confidence            99999999999864432 15555443

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=98.95  E-value=2.7e-09  Score=100.78  Aligned_cols=100  Identities=29%  Similarity=0.370  Sum_probs=80.8

Q ss_pred             ccccccceecccCceeEEEEEcCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEeccC
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVP  425 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~~  425 (451)
                      +++...+.||+|++|.||++....+..+++|.+.... ...+.+.+|+.++++++|+|++++.+++. .+..+++|||++
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~   83 (260)
T cd05069           6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFMG   83 (260)
T ss_pred             HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcCC
Confidence            4567788999999999999998777789999886442 23467899999999999999999998874 456889999999


Q ss_pred             CCCHHHHHhccCCCCCCchhhhh
Q 013018          426 NKSLDYFLYAQSPKNNNNWIGQD  448 (451)
Q Consensus       426 ~GsL~~~L~~~~~~~~l~W~~r~  448 (451)
                      +|+|.++++.... ..++|..++
T Consensus        84 ~~~L~~~~~~~~~-~~~~~~~~~  105 (260)
T cd05069          84 KGSLLDFLKEGDG-KYLKLPQLV  105 (260)
T ss_pred             CCCHHHHHhhCCC-CCCCHHHHH
Confidence            9999999986432 346665543

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=98.95  E-value=2e-09  Score=102.99  Aligned_cols=99  Identities=25%  Similarity=0.333  Sum_probs=81.2

Q ss_pred             cccccceecccCceeEEEEEcC-CCcEEEEEEeccCCh--hhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEec
Q 013018          347 NFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSRSSG--QGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  423 (451)
Q Consensus       347 ~~~~~~~lG~G~fg~V~~~~l~-~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey  423 (451)
                      +|+..++||+|+||.||++... .++.+++|.+.....  ...+.+.+|++++..++||||+++++++......++|+||
T Consensus         2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   81 (286)
T cd07846           2 KYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFEF   81 (286)
T ss_pred             ceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEec
Confidence            5677899999999999999964 588999998864322  2346788999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhccCCCCCCchhhhh
Q 013018          424 VPNKSLDYFLYAQSPKNNNNWIGQD  448 (451)
Q Consensus       424 ~~~GsL~~~L~~~~~~~~l~W~~r~  448 (451)
                      +++++|.++.+...   .++|.+..
T Consensus        82 ~~~~~l~~~~~~~~---~~~~~~~~  103 (286)
T cd07846          82 VDHTVLDDLEKYPN---GLDESRVR  103 (286)
T ss_pred             CCccHHHHHHhccC---CCCHHHHH
Confidence            99999988876532   25665543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=98.95  E-value=4.1e-09  Score=101.14  Aligned_cols=89  Identities=27%  Similarity=0.393  Sum_probs=75.6

Q ss_pred             ccccceecccCceeEEEEE-cCCCcEEEEEEeccCC---hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEec
Q 013018          348 FSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSS---GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  423 (451)
Q Consensus       348 ~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey  423 (451)
                      |+..+.||+|+||.||++. ...++.+|||.+....   .+....+.+|+.++.+++|+|++++.+.+...+..++|+||
T Consensus         2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~   81 (285)
T cd05630           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL   81 (285)
T ss_pred             ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence            4567889999999999998 4568899999986432   12234578899999999999999999999998999999999


Q ss_pred             cCCCCHHHHHhcc
Q 013018          424 VPNKSLDYFLYAQ  436 (451)
Q Consensus       424 ~~~GsL~~~L~~~  436 (451)
                      +++|+|.+++...
T Consensus        82 ~~g~~L~~~l~~~   94 (285)
T cd05630          82 MNGGDLKFHIYHM   94 (285)
T ss_pred             cCCCcHHHHHHHh
Confidence            9999999999753

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=98.94  E-value=5.2e-09  Score=98.64  Aligned_cols=90  Identities=21%  Similarity=0.282  Sum_probs=79.9

Q ss_pred             cccccceecccCceeEEEEEcC-CCcEEEEEEeccCCh-hhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEecc
Q 013018          347 NFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSRSSG-QGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFV  424 (451)
Q Consensus       347 ~~~~~~~lG~G~fg~V~~~~l~-~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~  424 (451)
                      +|+..+.||+|++|.||++... +++.++||++..... ....++.+|+..+.+++|+|++++.+.+......++++||+
T Consensus         2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~   81 (264)
T cd06623           2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYM   81 (264)
T ss_pred             cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEec
Confidence            5677899999999999999954 589999999876543 34578999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcc
Q 013018          425 PNKSLDYFLYAQ  436 (451)
Q Consensus       425 ~~GsL~~~L~~~  436 (451)
                      ++++|.+++...
T Consensus        82 ~~~~L~~~l~~~   93 (264)
T cd06623          82 DGGSLADLLKKV   93 (264)
T ss_pred             CCCcHHHHHHHc
Confidence            999999999864

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=98.94  E-value=5e-09  Score=99.12  Aligned_cols=91  Identities=25%  Similarity=0.408  Sum_probs=75.2

Q ss_pred             ccccccceecccCceeEEEEEc-CCCcEEEEEEeccC-----ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeC--cee
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRS-----SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEG--EEK  417 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~-----~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~--~~~  417 (451)
                      .+|+..+.||+|+||.||++.. .++..|++|.+...     ..+..+.+.+|+.++.+++||||+++.+++...  ...
T Consensus         2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (265)
T cd06652           2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL   81 (265)
T ss_pred             CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence            3577889999999999999984 56889999988532     122346788999999999999999999987653  457


Q ss_pred             eEEEeccCCCCHHHHHhcc
Q 013018          418 ILVYEFVPNKSLDYFLYAQ  436 (451)
Q Consensus       418 ~lv~ey~~~GsL~~~L~~~  436 (451)
                      ++++||+++|+|.+++...
T Consensus        82 ~~v~e~~~~~~L~~~l~~~  100 (265)
T cd06652          82 SIFMEHMPGGSIKDQLKSY  100 (265)
T ss_pred             EEEEEecCCCcHHHHHHHc
Confidence            7999999999999999764

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=98.94  E-value=2.2e-09  Score=106.45  Aligned_cols=92  Identities=24%  Similarity=0.391  Sum_probs=80.5

Q ss_pred             hccccccceecccCceeEEEEEc-CCCcEEEEEEeccCCh---hhHHHHHHHHHHHhcCC-CCCcccceeEEEeCceeeE
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSG---QGGQEFKNEVVLVAKLQ-HRNLVRLLGFCLEGEEKIL  419 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~l  419 (451)
                      .+.|...+.||+|.||.||++.- .+|+.+|+|.+.....   +..+...+|+.+|.++. |||||.+.+.+.....++|
T Consensus        34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~l  113 (382)
T KOG0032|consen   34 KEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYL  113 (382)
T ss_pred             cccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEE
Confidence            34577779999999999999994 4599999999976533   34468999999999998 9999999999999999999


Q ss_pred             EEeccCCCCHHHHHhcc
Q 013018          420 VYEFVPNKSLDYFLYAQ  436 (451)
Q Consensus       420 v~ey~~~GsL~~~L~~~  436 (451)
                      |||++.+|.|.+.|...
T Consensus       114 vmEL~~GGeLfd~i~~~  130 (382)
T KOG0032|consen  114 VMELCEGGELFDRIVKK  130 (382)
T ss_pred             EEEecCCchHHHHHHHc
Confidence            99999999999998865

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=98.94  E-value=4.2e-09  Score=99.88  Aligned_cols=90  Identities=28%  Similarity=0.528  Sum_probs=74.2

Q ss_pred             ccccceecccCceeEEEEEcCC----CcEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCce-----
Q 013018          348 FSTDNKLGEGGFGEVYKGVLPS----GQEIAVKRLSRS--SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEE-----  416 (451)
Q Consensus       348 ~~~~~~lG~G~fg~V~~~~l~~----g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~-----  416 (451)
                      |+..+.||+|+||.||+|....    +..+|+|.+...  .......+.+|+..++.++||||+++++.+...+.     
T Consensus         1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   80 (273)
T cd05035           1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP   80 (273)
T ss_pred             CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence            4567899999999999998532    367999998754  23345689999999999999999999999876554     


Q ss_pred             -eeEEEeccCCCCHHHHHhccC
Q 013018          417 -KILVYEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       417 -~~lv~ey~~~GsL~~~L~~~~  437 (451)
                       .++++||+++|+|.+++...+
T Consensus        81 ~~~~v~e~~~~~~l~~~l~~~~  102 (273)
T cd05035          81 KPMVILPFMKHGDLHSFLLYSR  102 (273)
T ss_pred             ccEEEEeccCCCCHHHHHHHhh
Confidence             789999999999999997643

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=98.94  E-value=5.2e-09  Score=102.66  Aligned_cols=86  Identities=19%  Similarity=0.237  Sum_probs=72.5

Q ss_pred             ceecccCceeEEEEEc-CCCcEEEEEEeccC---ChhhHHHHHHHHHHHhcC-CCCCcccceeEEEeCceeeEEEeccCC
Q 013018          352 NKLGEGGFGEVYKGVL-PSGQEIAVKRLSRS---SGQGGQEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKILVYEFVPN  426 (451)
Q Consensus       352 ~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lv~ey~~~  426 (451)
                      +.||+|+||.||++.. .+++.+|+|.+...   .......+.+|+.++.++ +||||+++++++...+..++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~   80 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG   80 (329)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence            4799999999999994 46789999999753   223345678899888877 799999999999999999999999999


Q ss_pred             CCHHHHHhccC
Q 013018          427 KSLDYFLYAQS  437 (451)
Q Consensus       427 GsL~~~L~~~~  437 (451)
                      |+|..++....
T Consensus        81 ~~L~~~~~~~~   91 (329)
T cd05618          81 GDLMFHMQRQR   91 (329)
T ss_pred             CCHHHHHHHcC
Confidence            99999987643

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=98.94  E-value=4.3e-09  Score=100.58  Aligned_cols=99  Identities=23%  Similarity=0.307  Sum_probs=80.5

Q ss_pred             ccccccceecccCceeEEEEEcC-CCcEEEEEEeccCC--hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEe
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSRSS--GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  422 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l~-~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  422 (451)
                      ++|+..+.||+|+||.||++... +++.+++|++....  ....+.+.+|+.++.+++|+|++++++.+......++|+|
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e   80 (286)
T cd07847           1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE   80 (286)
T ss_pred             CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence            35677889999999999999954 68899999886432  2223568899999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhccCCCCCCchhhh
Q 013018          423 FVPNKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       423 y~~~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                      |++++.|..+++...   .++|.++
T Consensus        81 ~~~~~~l~~~~~~~~---~~~~~~~  102 (286)
T cd07847          81 YCDHTVLNELEKNPR---GVPEHLI  102 (286)
T ss_pred             ccCccHHHHHHhCCC---CCCHHHH
Confidence            999998888876432   2556543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=98.94  E-value=3.3e-09  Score=102.96  Aligned_cols=91  Identities=24%  Similarity=0.383  Sum_probs=76.6

Q ss_pred             ccccccceecccCceeEEEEEc-CCCcEEEEEEeccCCh-hhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEec
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSG-QGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  423 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey  423 (451)
                      ++|...++||+|+||.||++.. ..++.+|+|.+..... .....+.+|+.++++++||||+++++++...+..++|+||
T Consensus         6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   85 (309)
T cd07872           6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY   85 (309)
T ss_pred             CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence            4577889999999999999984 4678899999875432 2335688999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhccC
Q 013018          424 VPNKSLDYFLYAQS  437 (451)
Q Consensus       424 ~~~GsL~~~L~~~~  437 (451)
                      +++ +|.+++....
T Consensus        86 ~~~-~l~~~~~~~~   98 (309)
T cd07872          86 LDK-DLKQYMDDCG   98 (309)
T ss_pred             CCC-CHHHHHHhcC
Confidence            975 8999887643

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=98.93  E-value=5.1e-09  Score=102.12  Aligned_cols=85  Identities=22%  Similarity=0.303  Sum_probs=71.1

Q ss_pred             ceecccCceeEEEEEc-CCCcEEEEEEeccCC---hhhHHHHHHHHHHHhcC-CCCCcccceeEEEeCceeeEEEeccCC
Q 013018          352 NKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSS---GQGGQEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKILVYEFVPN  426 (451)
Q Consensus       352 ~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lv~ey~~~  426 (451)
                      +.||+|+||.||++.. .+++.||||.+....   ....+.+..|..++..+ +||||+++.+.+...+..+|||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~   80 (316)
T cd05619           1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence            4699999999999995 457899999997542   22345677788888764 899999999999999999999999999


Q ss_pred             CCHHHHHhcc
Q 013018          427 KSLDYFLYAQ  436 (451)
Q Consensus       427 GsL~~~L~~~  436 (451)
                      |+|.++++..
T Consensus        81 g~L~~~l~~~   90 (316)
T cd05619          81 GDLMFHIQSC   90 (316)
T ss_pred             CcHHHHHHHc
Confidence            9999999864

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=98.93  E-value=4.6e-09  Score=102.62  Aligned_cols=86  Identities=22%  Similarity=0.271  Sum_probs=72.4

Q ss_pred             ceecccCceeEEEEEc-CCCcEEEEEEeccCC---hhhHHHHHHHHHHHhcC-CCCCcccceeEEEeCceeeEEEeccCC
Q 013018          352 NKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSS---GQGGQEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKILVYEFVPN  426 (451)
Q Consensus       352 ~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lv~ey~~~  426 (451)
                      ++||+|+||.||++.. ..++.+|+|.+....   ....+.+..|.+++..+ +||||+++.+++...+..+|||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~   80 (321)
T cd05591           1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG   80 (321)
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence            4689999999999995 457899999987532   23345678899998876 799999999999999999999999999


Q ss_pred             CCHHHHHhccC
Q 013018          427 KSLDYFLYAQS  437 (451)
Q Consensus       427 GsL~~~L~~~~  437 (451)
                      |+|..++...+
T Consensus        81 ~~L~~~l~~~~   91 (321)
T cd05591          81 GDLMFQIQRSR   91 (321)
T ss_pred             CcHHHHHHHcC
Confidence            99999997643

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=98.93  E-value=4.4e-09  Score=98.77  Aligned_cols=97  Identities=40%  Similarity=0.608  Sum_probs=80.7

Q ss_pred             ceecccCceeEEEEEcCC----CcEEEEEEeccCChh-hHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEeccCC
Q 013018          352 NKLGEGGFGEVYKGVLPS----GQEIAVKRLSRSSGQ-GGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPN  426 (451)
Q Consensus       352 ~~lG~G~fg~V~~~~l~~----g~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~~~  426 (451)
                      +.||+|+||.||++....    +..+++|.+...... ..+.+.+|+..+..++|+|++++++++......++++||+++
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG   80 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence            468999999999999643    788999999765433 357899999999999999999999999998899999999999


Q ss_pred             CCHHHHHhccCC------CCCCchhhhh
Q 013018          427 KSLDYFLYAQSP------KNNNNWIGQD  448 (451)
Q Consensus       427 GsL~~~L~~~~~------~~~l~W~~r~  448 (451)
                      |+|.++++....      ...++|.+..
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~  108 (262)
T cd00192          81 GDLLDYLRKSRPVFPSPEKSTLSLKDLL  108 (262)
T ss_pred             CcHHHHHhhccccccccccccCCHHHHH
Confidence            999999997532      2446665543

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=98.93  E-value=5.6e-09  Score=99.76  Aligned_cols=97  Identities=23%  Similarity=0.326  Sum_probs=81.0

Q ss_pred             ccccceecccCceeEEEEEc-CCCcEEEEEEeccCC--hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEecc
Q 013018          348 FSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSS--GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFV  424 (451)
Q Consensus       348 ~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~  424 (451)
                      |+..+.||+|+||.||++.. .++..+++|.+....  ....+.+.+|+.++++++||||+++++.+..+...++|+||+
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~   81 (286)
T cd07832           2 YKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEYM   81 (286)
T ss_pred             ceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEeccc
Confidence            56778999999999999994 578999999987543  233467999999999999999999999999889999999999


Q ss_pred             CCCCHHHHHhccCCCCCCchhhh
Q 013018          425 PNKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       425 ~~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                       +++|.++++...  ..+++.+.
T Consensus        82 -~~~L~~~~~~~~--~~~~~~~~  101 (286)
T cd07832          82 -PSDLSEVLRDEE--RPLPEAQV  101 (286)
T ss_pred             -CCCHHHHHHhcC--CCCCHHHH
Confidence             999999998643  33555443

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=98.93  E-value=3.8e-09  Score=100.26  Aligned_cols=102  Identities=25%  Similarity=0.374  Sum_probs=81.1

Q ss_pred             HhhccccccceecccCceeEEEEEc-CCCcEEEEEEeccCChhhHHHHHHHHHHHhcC-CCCCcccceeEEEeC------
Q 013018          343 VATNNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKL-QHRNLVRLLGFCLEG------  414 (451)
Q Consensus       343 ~~~~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~------  414 (451)
                      .+.+.|...+.||+|+||.||+|.. ..++.+++|.+.... ....++.+|+.++.++ +|+||+++.+.+...      
T Consensus         3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~   81 (272)
T cd06637           3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD   81 (272)
T ss_pred             ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence            3456677788999999999999984 467899999986543 3446788999999998 799999999998753      


Q ss_pred             ceeeEEEeccCCCCHHHHHhccCCCCCCchhh
Q 013018          415 EEKILVYEFVPNKSLDYFLYAQSPKNNNNWIG  446 (451)
Q Consensus       415 ~~~~lv~ey~~~GsL~~~L~~~~~~~~l~W~~  446 (451)
                      +..++++||+++|+|.+++..... ..++|..
T Consensus        82 ~~~~iv~e~~~~~~L~~~l~~~~~-~~l~~~~  112 (272)
T cd06637          82 DQLWLVMEFCGAGSVTDLIKNTKG-NTLKEEW  112 (272)
T ss_pred             cEEEEEEEcCCCCcHHHHHHhccC-CCCCHHH
Confidence            357899999999999999986432 3355543

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=98.93  E-value=2.1e-09  Score=102.43  Aligned_cols=88  Identities=23%  Similarity=0.446  Sum_probs=76.1

Q ss_pred             ccccceecccCceeEEEEEc-CCCcEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEeccC
Q 013018          348 FSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSS-GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVP  425 (451)
Q Consensus       348 ~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~~  425 (451)
                      |+..+.||+|+||.||+|.. ..+..|++|.+.... ....+.+.+|+.++++++||||+++++.+......++|+||++
T Consensus         6 y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   85 (277)
T cd06642           6 FTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLG   85 (277)
T ss_pred             HHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEccC
Confidence            45567899999999999984 467889999887443 3345679999999999999999999999999999999999999


Q ss_pred             CCCHHHHHhc
Q 013018          426 NKSLDYFLYA  435 (451)
Q Consensus       426 ~GsL~~~L~~  435 (451)
                      +++|.+++..
T Consensus        86 ~~~L~~~~~~   95 (277)
T cd06642          86 GGSALDLLKP   95 (277)
T ss_pred             CCcHHHHhhc
Confidence            9999999875

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=98.92  E-value=1.8e-09  Score=114.22  Aligned_cols=98  Identities=30%  Similarity=0.479  Sum_probs=85.0

Q ss_pred             HHHHhhccccccceecccCceeEEEEEcC----C----CcEEEEEEeccC-ChhhHHHHHHHHHHHhcC-CCCCccccee
Q 013018          340 TIEVATNNFSTDNKLGEGGFGEVYKGVLP----S----GQEIAVKRLSRS-SGQGGQEFKNEVVLVAKL-QHRNLVRLLG  409 (451)
Q Consensus       340 ~l~~~~~~~~~~~~lG~G~fg~V~~~~l~----~----g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~g  409 (451)
                      .++...+++...+.||+|.||.|++|.+.    .    ...||||+++.. ...+.+.+..|+.+|..+ +|+||+.++|
T Consensus       290 ~~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG  369 (609)
T KOG0200|consen  290 KWEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLG  369 (609)
T ss_pred             ceeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhhee
Confidence            56777777877889999999999999842    1    457999999865 334568899999999999 6999999999


Q ss_pred             EEEeCceeeEEEeccCCCCHHHHHhccC
Q 013018          410 FCLEGEEKILVYEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       410 ~~~~~~~~~lv~ey~~~GsL~~~L~~~~  437 (451)
                      +|...++.++|.||+++|+|.+||+.++
T Consensus       370 ~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r  397 (609)
T KOG0200|consen  370 ACTQDGPLYVIVEYAEHGDLLEFLRKKR  397 (609)
T ss_pred             eeccCCceEEEEEeccCCcHHHHHHhcc
Confidence            9999999999999999999999999876

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=98.92  E-value=5.4e-09  Score=99.83  Aligned_cols=93  Identities=24%  Similarity=0.306  Sum_probs=74.8

Q ss_pred             ecccCceeEEEEEc-CCCcEEEEEEeccCC---hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEeccCCCCH
Q 013018          354 LGEGGFGEVYKGVL-PSGQEIAVKRLSRSS---GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSL  429 (451)
Q Consensus       354 lG~G~fg~V~~~~l-~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~~~GsL  429 (451)
                      ||+|+||.||++.. .+|+.+|+|.+....   ......+..|++++.+++||||+++.+.+......++||||+++|+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L   80 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL   80 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence            69999999999984 568999999986431   11234567799999999999999999999888999999999999999


Q ss_pred             HHHHhccCCCCCCchhhh
Q 013018          430 DYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       430 ~~~L~~~~~~~~l~W~~r  447 (451)
                      .++++.... ..++|...
T Consensus        81 ~~~~~~~~~-~~~~~~~~   97 (277)
T cd05607          81 KYHIYNVGE-RGLEMERV   97 (277)
T ss_pred             HHHHHhccc-cCCCHHHH
Confidence            999875432 33666544

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.92  E-value=4e-10  Score=112.09  Aligned_cols=87  Identities=29%  Similarity=0.428  Sum_probs=74.9

Q ss_pred             ccccceecccCceeEEEEE-cCCCcEEEEEEeccCCh---hhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEec
Q 013018          348 FSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSG---QGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  423 (451)
Q Consensus       348 ~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey  423 (451)
                      |...+.||.|+||.||-+. ..+.+.||||++.-...   +.+.+++.|+..|.+++|||.+.+.|++......||||||
T Consensus        28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEY  107 (948)
T KOG0577|consen   28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEY  107 (948)
T ss_pred             HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHH
Confidence            5667899999999999999 56788999999975433   3457899999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhc
Q 013018          424 VPNKSLDYFLYA  435 (451)
Q Consensus       424 ~~~GsL~~~L~~  435 (451)
                      | -||-.++|.-
T Consensus       108 C-lGSAsDlleV  118 (948)
T KOG0577|consen  108 C-LGSASDLLEV  118 (948)
T ss_pred             H-hccHHHHHHH
Confidence            9 5577766654

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=98.92  E-value=5.4e-09  Score=97.94  Aligned_cols=85  Identities=36%  Similarity=0.652  Sum_probs=75.4

Q ss_pred             ceecccCceeEEEEEcCCCcEEEEEEeccCCh-hhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEeccCCCCHH
Q 013018          352 NKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSG-QGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLD  430 (451)
Q Consensus       352 ~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~~~GsL~  430 (451)
                      ++||+|+||.||++...+++.|++|.+..... +....+.+|+.++++++|+||+++++.+......++|+||+++++|.
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~   80 (251)
T cd05041           1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL   80 (251)
T ss_pred             CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence            46899999999999976699999998876533 34578999999999999999999999999999999999999999999


Q ss_pred             HHHhcc
Q 013018          431 YFLYAQ  436 (451)
Q Consensus       431 ~~L~~~  436 (451)
                      ++++..
T Consensus        81 ~~l~~~   86 (251)
T cd05041          81 TFLRKK   86 (251)
T ss_pred             HHHHhc
Confidence            999764

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=98.92  E-value=7.5e-09  Score=97.27  Aligned_cols=90  Identities=24%  Similarity=0.318  Sum_probs=77.5

Q ss_pred             ccccceecccCceeEEEEE-cCCCcEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEeccC
Q 013018          348 FSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRS-SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVP  425 (451)
Q Consensus       348 ~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~~  425 (451)
                      |+..+.||+|+||.||++. ..++..+++|.+... .....+.+.+|+.++.+++|+||+++.+.+...+..++++||++
T Consensus         2 y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   81 (255)
T cd08219           2 YNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYCD   81 (255)
T ss_pred             ceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeCC
Confidence            5667899999999999998 446889999988643 33345778899999999999999999999999999999999999


Q ss_pred             CCCHHHHHhccC
Q 013018          426 NKSLDYFLYAQS  437 (451)
Q Consensus       426 ~GsL~~~L~~~~  437 (451)
                      +|+|.+++....
T Consensus        82 ~~~l~~~~~~~~   93 (255)
T cd08219          82 GGDLMQKIKLQR   93 (255)
T ss_pred             CCcHHHHHHhcc
Confidence            999999987543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=98.92  E-value=5e-09  Score=102.50  Aligned_cols=96  Identities=20%  Similarity=0.155  Sum_probs=76.7

Q ss_pred             ccccceecccCceeEEEEE-cCCCcEEEEEEeccCC---hhhHHHHHHHHHHHhcCC-CCCcccceeEEEeCceeeEEEe
Q 013018          348 FSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSS---GQGGQEFKNEVVLVAKLQ-HRNLVRLLGFCLEGEEKILVYE  422 (451)
Q Consensus       348 ~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~lv~e  422 (451)
                      |...+.||+|+||.||++. ..+++.||+|.+....   ....+.+..|..++..+. |++|+++.+++...+..++|||
T Consensus         2 f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E   81 (323)
T cd05615           2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVME   81 (323)
T ss_pred             ceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEEc
Confidence            5667899999999999998 4578999999987432   223456888999998885 5778888888888889999999


Q ss_pred             ccCCCCHHHHHhccCCCCCCchhh
Q 013018          423 FVPNKSLDYFLYAQSPKNNNNWIG  446 (451)
Q Consensus       423 y~~~GsL~~~L~~~~~~~~l~W~~  446 (451)
                      |+++|+|.+++.....   ++|.+
T Consensus        82 y~~~g~L~~~i~~~~~---l~~~~  102 (323)
T cd05615          82 YVNGGDLMYHIQQVGK---FKEPQ  102 (323)
T ss_pred             CCCCCcHHHHHHHcCC---CCHHH
Confidence            9999999999976432   55544

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=98.92  E-value=5.6e-09  Score=101.91  Aligned_cols=92  Identities=22%  Similarity=0.248  Sum_probs=75.4

Q ss_pred             ceecccCceeEEEEEc-CCCcEEEEEEeccCC---hhhHHHHHHHHHHHhcC-CCCCcccceeEEEeCceeeEEEeccCC
Q 013018          352 NKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSS---GQGGQEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKILVYEFVPN  426 (451)
Q Consensus       352 ~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lv~ey~~~  426 (451)
                      +.||+|+||.||++.. .+++.+|||.+....   ......+.+|.+++..+ +||||+++.+++...+..++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~   80 (318)
T cd05570           1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG   80 (318)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            4699999999999985 457899999997532   23345678899999888 799999999999999999999999999


Q ss_pred             CCHHHHHhccCCCCCCchhh
Q 013018          427 KSLDYFLYAQSPKNNNNWIG  446 (451)
Q Consensus       427 GsL~~~L~~~~~~~~l~W~~  446 (451)
                      |+|..++....   .++|.+
T Consensus        81 ~~L~~~~~~~~---~l~~~~   97 (318)
T cd05570          81 GDLMFHIQRSG---RFDEPR   97 (318)
T ss_pred             CCHHHHHHHcC---CCCHHH
Confidence            99999988643   255544

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=98.92  E-value=3.7e-09  Score=100.37  Aligned_cols=85  Identities=27%  Similarity=0.460  Sum_probs=70.9

Q ss_pred             eecccCceeEEEEEcCCC---cEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEeccCCCC
Q 013018          353 KLGEGGFGEVYKGVLPSG---QEIAVKRLSRSS-GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKS  428 (451)
Q Consensus       353 ~lG~G~fg~V~~~~l~~g---~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~~~Gs  428 (451)
                      +||+|+||.||++...++   ..+++|.+.... .+..+.|.+|+.++..++||||+++++.+......++|+||+++|+
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~   81 (268)
T cd05086           2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD   81 (268)
T ss_pred             cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence            689999999999985333   345677765443 3345789999999999999999999999999889999999999999


Q ss_pred             HHHHHhccC
Q 013018          429 LDYFLYAQS  437 (451)
Q Consensus       429 L~~~L~~~~  437 (451)
                      |.++++...
T Consensus        82 L~~~l~~~~   90 (268)
T cd05086          82 LKSYLSQEQ   90 (268)
T ss_pred             HHHHHHhhh
Confidence            999998643

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=98.92  E-value=7.3e-09  Score=97.99  Aligned_cols=89  Identities=31%  Similarity=0.514  Sum_probs=75.4

Q ss_pred             ccccceecccCceeEEEEEc-CCCcEEEEEEeccCChh---------hHHHHHHHHHHHhcCCCCCcccceeEEEeCcee
Q 013018          348 FSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSGQ---------GGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEK  417 (451)
Q Consensus       348 ~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~~~---------~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~  417 (451)
                      +.....||+|+||.||+|.. .++..+++|.+......         ..+.+.+|+.++.+++||||+++++++...+..
T Consensus         2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   81 (267)
T cd06628           2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHL   81 (267)
T ss_pred             ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCcc
Confidence            45568999999999999984 46789999988643211         125688999999999999999999999998999


Q ss_pred             eEEEeccCCCCHHHHHhcc
Q 013018          418 ILVYEFVPNKSLDYFLYAQ  436 (451)
Q Consensus       418 ~lv~ey~~~GsL~~~L~~~  436 (451)
                      ++++||+++++|.+++...
T Consensus        82 ~lv~e~~~~~~L~~~l~~~  100 (267)
T cd06628          82 NIFLEYVPGGSVAALLNNY  100 (267)
T ss_pred             EEEEEecCCCCHHHHHHhc
Confidence            9999999999999999864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=98.91  E-value=3.5e-09  Score=99.71  Aligned_cols=90  Identities=23%  Similarity=0.307  Sum_probs=78.5

Q ss_pred             cccccceecccCceeEEEEEcC-CCcEEEEEEeccCC---hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEe
Q 013018          347 NFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSRSS---GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  422 (451)
Q Consensus       347 ~~~~~~~lG~G~fg~V~~~~l~-~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  422 (451)
                      +|+..+.||+|+||.||++... ++..+++|.+....   ....+.+.+|+.++++++||||+++++.+......++|+|
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   80 (258)
T cd05578           1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD   80 (258)
T ss_pred             CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence            3667889999999999999954 58899999997532   2345789999999999999999999999988899999999


Q ss_pred             ccCCCCHHHHHhcc
Q 013018          423 FVPNKSLDYFLYAQ  436 (451)
Q Consensus       423 y~~~GsL~~~L~~~  436 (451)
                      |+++++|.+++...
T Consensus        81 ~~~~~~L~~~l~~~   94 (258)
T cd05578          81 LLLGGDLRYHLSQK   94 (258)
T ss_pred             CCCCCCHHHHHHhc
Confidence            99999999999865

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=98.91  E-value=5e-09  Score=101.24  Aligned_cols=91  Identities=27%  Similarity=0.407  Sum_probs=76.9

Q ss_pred             ccccccceecccCceeEEEEEc-CCCcEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEec
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSS-GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  423 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey  423 (451)
                      ++|...+.||+|+||.||++.. .+++.||+|.+.... ......+.+|+.++++++||||+++++++......++|+||
T Consensus         6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~   85 (301)
T cd07873           6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY   85 (301)
T ss_pred             cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence            4577889999999999999984 467899999986442 22345688999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhccC
Q 013018          424 VPNKSLDYFLYAQS  437 (451)
Q Consensus       424 ~~~GsL~~~L~~~~  437 (451)
                      ++ ++|.+++....
T Consensus        86 ~~-~~l~~~l~~~~   98 (301)
T cd07873          86 LD-KDLKQYLDDCG   98 (301)
T ss_pred             cc-cCHHHHHHhcC
Confidence            97 69999988643

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=98.91  E-value=7.1e-09  Score=97.78  Aligned_cols=92  Identities=28%  Similarity=0.474  Sum_probs=78.7

Q ss_pred             ccccccceecccCceeEEEEE-cCCCcEEEEEEeccCC-----hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeE
Q 013018          346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSS-----GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKIL  419 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l  419 (451)
                      ++|...+.||+|++|.||++. ...++.+++|.+....     ......+.+|+.++.+++||||+++++++...+..++
T Consensus         2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~   81 (263)
T cd06625           2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI   81 (263)
T ss_pred             CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence            457788999999999999998 4568999999886432     1223578999999999999999999999999999999


Q ss_pred             EEeccCCCCHHHHHhccC
Q 013018          420 VYEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       420 v~ey~~~GsL~~~L~~~~  437 (451)
                      ++||+++++|.+++....
T Consensus        82 v~e~~~~~~l~~~~~~~~   99 (263)
T cd06625          82 FMEYMPGGSVKDQLKAYG   99 (263)
T ss_pred             EEEECCCCcHHHHHHHhC
Confidence            999999999999998643

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=98.91  E-value=3.3e-10  Score=104.14  Aligned_cols=88  Identities=25%  Similarity=0.443  Sum_probs=79.0

Q ss_pred             ccccceecccCceeEEEEE-cCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEeccCC
Q 013018          348 FSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPN  426 (451)
Q Consensus       348 ~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~~~  426 (451)
                      |...++||+|+||.|||+. ...|..||||.+.-.+  +.+++..|+.+|.+...|++|+++|.+.....+|||||||..
T Consensus        35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~s--DLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGA  112 (502)
T KOG0574|consen   35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDT--DLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGA  112 (502)
T ss_pred             HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccc--hHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCC
Confidence            5667899999999999998 5679999999886543  468999999999999999999999999999999999999999


Q ss_pred             CCHHHHHhccC
Q 013018          427 KSLDYFLYAQS  437 (451)
Q Consensus       427 GsL~~~L~~~~  437 (451)
                      |+..+.++-++
T Consensus       113 GSiSDI~R~R~  123 (502)
T KOG0574|consen  113 GSISDIMRARR  123 (502)
T ss_pred             CcHHHHHHHhc
Confidence            99999998644

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=98.91  E-value=3.2e-09  Score=97.70  Aligned_cols=93  Identities=27%  Similarity=0.352  Sum_probs=80.5

Q ss_pred             ccccccceecccCceeEEEEE-cCCCcEEEEEEeccCC---hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEE
Q 013018          346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSS---GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  421 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~  421 (451)
                      ++|.....||.|+||+|...+ ..+|.-.|+|+++...   -++.+...+|..+|+.+.||.+++|.+-+.....++|||
T Consensus        44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvm  123 (355)
T KOG0616|consen   44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVM  123 (355)
T ss_pred             hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEE
Confidence            456678899999999999998 4568889999997653   233467889999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhccCC
Q 013018          422 EFVPNKSLDYFLYAQSP  438 (451)
Q Consensus       422 ey~~~GsL~~~L~~~~~  438 (451)
                      ||.++|.|..+|+..++
T Consensus       124 eyv~GGElFS~Lrk~~r  140 (355)
T KOG0616|consen  124 EYVPGGELFSYLRKSGR  140 (355)
T ss_pred             eccCCccHHHHHHhcCC
Confidence            99999999999997553

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=98.90  E-value=4e-09  Score=99.57  Aligned_cols=90  Identities=22%  Similarity=0.295  Sum_probs=78.9

Q ss_pred             cccccceecccCceeEEEEEc-CCCcEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEecc
Q 013018          347 NFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSS-GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFV  424 (451)
Q Consensus       347 ~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~  424 (451)
                      +|+..+.||+|+||.||++.. .+++.+++|.+.... .+..+++.+|+.++++++||||+++.+.+......++++||+
T Consensus         2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~   81 (265)
T cd06605           2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYM   81 (265)
T ss_pred             cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEec
Confidence            466678999999999999995 468899999987653 344567999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcc
Q 013018          425 PNKSLDYFLYAQ  436 (451)
Q Consensus       425 ~~GsL~~~L~~~  436 (451)
                      ++++|.+++...
T Consensus        82 ~~~~L~~~~~~~   93 (265)
T cd06605          82 DGGSLDKILKEV   93 (265)
T ss_pred             CCCcHHHHHHHc
Confidence            999999999865

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=98.90  E-value=9e-09  Score=96.31  Aligned_cols=98  Identities=26%  Similarity=0.354  Sum_probs=82.8

Q ss_pred             ccccceecccCceeEEEEEcC-CCcEEEEEEeccCCh--hhHHHHHHHHHHHhcCCCCCcccceeEEEeC--ceeeEEEe
Q 013018          348 FSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSRSSG--QGGQEFKNEVVLVAKLQHRNLVRLLGFCLEG--EEKILVYE  422 (451)
Q Consensus       348 ~~~~~~lG~G~fg~V~~~~l~-~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~--~~~~lv~e  422 (451)
                      |+..+.||+|++|.||+|... ++..+++|.+.....  ...+.+.+|+..+++++|+||+++++.....  ...++++|
T Consensus         2 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e   81 (260)
T cd06606           2 WTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLE   81 (260)
T ss_pred             ceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEEE
Confidence            566789999999999999954 688999999875532  4457899999999999999999999999887  78999999


Q ss_pred             ccCCCCHHHHHhccCCCCCCchhhhh
Q 013018          423 FVPNKSLDYFLYAQSPKNNNNWIGQD  448 (451)
Q Consensus       423 y~~~GsL~~~L~~~~~~~~l~W~~r~  448 (451)
                      |+++++|.+++....   .++|.++.
T Consensus        82 ~~~~~~L~~~~~~~~---~~~~~~~~  104 (260)
T cd06606          82 YVSGGSLSSLLKKFG---KLPEPVIR  104 (260)
T ss_pred             ecCCCcHHHHHHHcC---CCCHHHHH
Confidence            999999999998654   46665543

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=98.90  E-value=7.2e-09  Score=98.44  Aligned_cols=86  Identities=33%  Similarity=0.577  Sum_probs=72.2

Q ss_pred             ceecccCceeEEEEEcCC-Cc--EEEEEEeccC-ChhhHHHHHHHHHHHhcC-CCCCcccceeEEEeCceeeEEEeccCC
Q 013018          352 NKLGEGGFGEVYKGVLPS-GQ--EIAVKRLSRS-SGQGGQEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKILVYEFVPN  426 (451)
Q Consensus       352 ~~lG~G~fg~V~~~~l~~-g~--~vavK~l~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lv~ey~~~  426 (451)
                      +.||+|+||.||++...+ +.  .+++|.+... .....+.+.+|+.++.++ +||||+++++.+...+..++++||+++
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~   80 (270)
T cd05047           1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH   80 (270)
T ss_pred             CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence            468999999999999643 43  4688888643 234456899999999999 799999999999988889999999999


Q ss_pred             CCHHHHHhccC
Q 013018          427 KSLDYFLYAQS  437 (451)
Q Consensus       427 GsL~~~L~~~~  437 (451)
                      |+|.++++..+
T Consensus        81 ~~L~~~i~~~~   91 (270)
T cd05047          81 GNLLDFLRKSR   91 (270)
T ss_pred             CcHHHHHHhcc
Confidence            99999998643

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=98.90  E-value=6.9e-09  Score=98.77  Aligned_cols=94  Identities=22%  Similarity=0.450  Sum_probs=79.3

Q ss_pred             ccccceecccCceeEEEEE-cCCCcEEEEEEeccC-ChhhHHHHHHHHHHHhcCC---CCCcccceeEEEeCceeeEEEe
Q 013018          348 FSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRS-SGQGGQEFKNEVVLVAKLQ---HRNLVRLLGFCLEGEEKILVYE  422 (451)
Q Consensus       348 ~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~---h~niv~l~g~~~~~~~~~lv~e  422 (451)
                      |+..+.||+|+||.||+|. ..++..+++|.+... .....+++.+|+.++++++   |||++++.+.+......++++|
T Consensus         3 y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~e   82 (277)
T cd06917           3 YQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIME   82 (277)
T ss_pred             hhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEEe
Confidence            5667899999999999999 467899999998654 3334567889999999986   9999999999998889999999


Q ss_pred             ccCCCCHHHHHhccCCCCCCchh
Q 013018          423 FVPNKSLDYFLYAQSPKNNNNWI  445 (451)
Q Consensus       423 y~~~GsL~~~L~~~~~~~~l~W~  445 (451)
                      |+++++|.++++..    .++|.
T Consensus        83 ~~~~~~L~~~~~~~----~l~~~  101 (277)
T cd06917          83 YAEGGSVRTLMKAG----PIAEK  101 (277)
T ss_pred             cCCCCcHHHHHHcc----CCCHH
Confidence            99999999998753    35554

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=98.90  E-value=9.2e-09  Score=100.07  Aligned_cols=98  Identities=23%  Similarity=0.241  Sum_probs=81.4

Q ss_pred             cccccceecccCceeEEEEEc-CCCcEEEEEEeccCCh---hhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEe
Q 013018          347 NFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSG---QGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  422 (451)
Q Consensus       347 ~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  422 (451)
                      +|+..+.||+|+||.||++.. ..++.+++|.+.....   ...+.+.+|++++.+++|+||+++++.+......++|+|
T Consensus         2 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e   81 (316)
T cd05574           2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMD   81 (316)
T ss_pred             ceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEE
Confidence            577788999999999999995 4589999999975432   234678999999999999999999999999899999999


Q ss_pred             ccCCCCHHHHHhccCCCCCCchh
Q 013018          423 FVPNKSLDYFLYAQSPKNNNNWI  445 (451)
Q Consensus       423 y~~~GsL~~~L~~~~~~~~l~W~  445 (451)
                      |+++++|.+++.... ...+++.
T Consensus        82 ~~~~~~L~~~~~~~~-~~~l~~~  103 (316)
T cd05574          82 YCPGGELFRLLQRQP-GKCLSEE  103 (316)
T ss_pred             ecCCCCHHHHHHhCC-CCccCHH
Confidence            999999999998532 2334443

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=98.90  E-value=3.7e-09  Score=99.38  Aligned_cols=86  Identities=34%  Similarity=0.551  Sum_probs=74.7

Q ss_pred             cccceecccCceeEEEEEc-CCCcEEEEEEeccCChhhH--HHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEeccC
Q 013018          349 STDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSGQGG--QEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVP  425 (451)
Q Consensus       349 ~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~~~~~--~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~~  425 (451)
                      +..+.||+|+||.||++.. .+++.+|+|.+........  ....+|+.++.+++||||++++++.......++++||++
T Consensus         2 ~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~~   81 (260)
T PF00069_consen    2 RLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYCP   81 (260)
T ss_dssp             EEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEET
T ss_pred             EEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccccccccccccccccccccccccccccc
Confidence            4578999999999999994 5567899999987654332  345679999999999999999999999999999999999


Q ss_pred             CCCHHHHHh
Q 013018          426 NKSLDYFLY  434 (451)
Q Consensus       426 ~GsL~~~L~  434 (451)
                      +++|.++|.
T Consensus        82 ~~~L~~~l~   90 (260)
T PF00069_consen   82 GGSLQDYLQ   90 (260)
T ss_dssp             TEBHHHHHH
T ss_pred             ccccccccc
Confidence            999999998

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=98.90  E-value=7.6e-09  Score=101.22  Aligned_cols=91  Identities=21%  Similarity=0.211  Sum_probs=74.8

Q ss_pred             cccccceecccCceeEEEEEc-CCCcEEEEEEeccC---ChhhHHHHHHHHHHHhcCCC-CCcccceeEEEeCceeeEEE
Q 013018          347 NFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRS---SGQGGQEFKNEVVLVAKLQH-RNLVRLLGFCLEGEEKILVY  421 (451)
Q Consensus       347 ~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h-~niv~l~g~~~~~~~~~lv~  421 (451)
                      +|+..+.||+|+||.||++.. ..++.+|||.+...   .....+.+..|.+++..++| ++|+++.+++...+..++||
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (324)
T cd05587           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM   80 (324)
T ss_pred             CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence            366788999999999999984 45789999998743   22344678899999999965 56888888888888999999


Q ss_pred             eccCCCCHHHHHhccC
Q 013018          422 EFVPNKSLDYFLYAQS  437 (451)
Q Consensus       422 ey~~~GsL~~~L~~~~  437 (451)
                      ||+++|+|.+++....
T Consensus        81 E~~~~g~L~~~~~~~~   96 (324)
T cd05587          81 EYVNGGDLMYHIQQVG   96 (324)
T ss_pred             cCCCCCcHHHHHHHcC
Confidence            9999999999997643

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=98.89  E-value=8.6e-10  Score=94.31  Aligned_cols=87  Identities=26%  Similarity=0.472  Sum_probs=72.3

Q ss_pred             ccccceecccCceeEEEEE-cCCCcEEEEEEeccCCh--hhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEecc
Q 013018          348 FSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSG--QGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFV  424 (451)
Q Consensus       348 ~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~  424 (451)
                      +...++||+|.||+|+|++ ...++.||+|+++....  .-....++|+.+++.+.|+|||+|+.+.+.+..+-||+||+
T Consensus         4 ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~c   83 (292)
T KOG0662|consen    4 YDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFC   83 (292)
T ss_pred             hHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHHh
Confidence            4456789999999999999 66789999999875432  22367899999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhc
Q 013018          425 PNKSLDYFLYA  435 (451)
Q Consensus       425 ~~GsL~~~L~~  435 (451)
                      . .+|..|...
T Consensus        84 d-qdlkkyfds   93 (292)
T KOG0662|consen   84 D-QDLKKYFDS   93 (292)
T ss_pred             h-HHHHHHHHh
Confidence            4 366666543

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=98.89  E-value=3.1e-09  Score=101.69  Aligned_cols=98  Identities=23%  Similarity=0.423  Sum_probs=80.2

Q ss_pred             ChHHHHHhhccccccceecccCceeEEEEEc-CCCcEEEEEEeccCChhhHHHHHHHHHHHhcC-CCCCcccceeEEEe-
Q 013018          337 DFETIEVATNNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKL-QHRNLVRLLGFCLE-  413 (451)
Q Consensus       337 ~~~~l~~~~~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~-  413 (451)
                      .++.+..+.++|+..+.||+|+||.||++.. ..++.+++|.+.... ....++.+|+.++.++ +||||+++++++.. 
T Consensus         9 ~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~   87 (286)
T cd06638           9 IFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGMYYKK   87 (286)
T ss_pred             EeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeeeeeec
Confidence            3455566778899999999999999999984 567899999876432 2235688999999999 69999999998753 


Q ss_pred             ----CceeeEEEeccCCCCHHHHHhc
Q 013018          414 ----GEEKILVYEFVPNKSLDYFLYA  435 (451)
Q Consensus       414 ----~~~~~lv~ey~~~GsL~~~L~~  435 (451)
                          ++..++||||+++|+|.++++.
T Consensus        88 ~~~~~~~~~lv~e~~~~~~L~~~l~~  113 (286)
T cd06638          88 DVKNGDQLWLVLELCNGGSVTDLVKG  113 (286)
T ss_pred             ccCCCCeEEEEEeecCCCCHHHHHHH
Confidence                3468999999999999999875

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=98.89  E-value=2.9e-09  Score=100.86  Aligned_cols=97  Identities=32%  Similarity=0.492  Sum_probs=77.8

Q ss_pred             ceecccCceeEEEEEcCC-------CcEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEec
Q 013018          352 NKLGEGGFGEVYKGVLPS-------GQEIAVKRLSRSS-GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  423 (451)
Q Consensus       352 ~~lG~G~fg~V~~~~l~~-------g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey  423 (451)
                      +.||+|+||.||++...+       +..+++|.+.... .....++.+|+.++++++||||+++++++...+..++++||
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (269)
T cd05044           1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL   80 (269)
T ss_pred             CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence            468999999999998532       2578999886543 23456899999999999999999999999988899999999


Q ss_pred             cCCCCHHHHHhccCC----CCCCchhhhh
Q 013018          424 VPNKSLDYFLYAQSP----KNNNNWIGQD  448 (451)
Q Consensus       424 ~~~GsL~~~L~~~~~----~~~l~W~~r~  448 (451)
                      +++|+|.++|+....    ...++|.+++
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~  109 (269)
T cd05044          81 MEGGDLLSYLRDARVERFGPPLLTLKELL  109 (269)
T ss_pred             cCCCcHHHHHHHhhhcccCCccccHHHHH
Confidence            999999999986432    2336666544

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=98.89  E-value=1.2e-08  Score=96.58  Aligned_cols=91  Identities=26%  Similarity=0.440  Sum_probs=75.4

Q ss_pred             cccccceecccCceeEEEEEc-CCCcEEEEEEeccCC-----hhhHHHHHHHHHHHhcCCCCCcccceeEEEe--Cceee
Q 013018          347 NFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSS-----GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLE--GEEKI  418 (451)
Q Consensus       347 ~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~--~~~~~  418 (451)
                      +|+..+.||+|+||.||++.. ..+..+++|.+....     .+....+.+|+.++++++||||+++.+.+..  ....+
T Consensus         3 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~   82 (266)
T cd06651           3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLT   82 (266)
T ss_pred             CccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEE
Confidence            577889999999999999984 568899999886331     2234568899999999999999999998765  35678


Q ss_pred             EEEeccCCCCHHHHHhccC
Q 013018          419 LVYEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       419 lv~ey~~~GsL~~~L~~~~  437 (451)
                      +++||+++++|.+++....
T Consensus        83 l~~e~~~~~~L~~~l~~~~  101 (266)
T cd06651          83 IFMEYMPGGSVKDQLKAYG  101 (266)
T ss_pred             EEEeCCCCCcHHHHHHHcC
Confidence            9999999999999998643

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=98.89  E-value=7.3e-09  Score=101.70  Aligned_cols=88  Identities=19%  Similarity=0.434  Sum_probs=72.4

Q ss_pred             ccccceecccCceeEEEEE-cCCCcEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCc-----eeeE
Q 013018          348 FSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRS--SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGE-----EKIL  419 (451)
Q Consensus       348 ~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~-----~~~l  419 (451)
                      |+..++||+|+||.||++. ..++..||||++...  .......+.+|+.++++++||||+++.+++....     ..++
T Consensus         2 y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~l   81 (338)
T cd07859           2 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYV   81 (338)
T ss_pred             eEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEEE
Confidence            5677899999999999999 457899999998643  2223457899999999999999999999886432     4799


Q ss_pred             EEeccCCCCHHHHHhcc
Q 013018          420 VYEFVPNKSLDYFLYAQ  436 (451)
Q Consensus       420 v~ey~~~GsL~~~L~~~  436 (451)
                      |+||++ ++|.+++...
T Consensus        82 v~e~~~-~~L~~~l~~~   97 (338)
T cd07859          82 VFELME-SDLHQVIKAN   97 (338)
T ss_pred             EEecCC-CCHHHHHHhc
Confidence            999995 6999998754

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=98.89  E-value=5.1e-09  Score=100.83  Aligned_cols=88  Identities=28%  Similarity=0.409  Sum_probs=76.7

Q ss_pred             ccccceecccCceeEEEEEc-CCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEeccCC
Q 013018          348 FSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPN  426 (451)
Q Consensus       348 ~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~~~  426 (451)
                      +.....||+|+||.||++.. .++..++||.+........+.+.+|+.++.+++|+||+++++.+...+..++|+||+++
T Consensus        24 ~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~  103 (292)
T cd06658          24 LDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEG  103 (292)
T ss_pred             HhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCC
Confidence            33456799999999999984 46889999998765555567799999999999999999999999999999999999999


Q ss_pred             CCHHHHHhc
Q 013018          427 KSLDYFLYA  435 (451)
Q Consensus       427 GsL~~~L~~  435 (451)
                      ++|.+++..
T Consensus       104 ~~L~~~~~~  112 (292)
T cd06658         104 GALTDIVTH  112 (292)
T ss_pred             CcHHHHHhc
Confidence            999999864

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=98.89  E-value=8.7e-09  Score=97.75  Aligned_cols=99  Identities=26%  Similarity=0.456  Sum_probs=75.5

Q ss_pred             cccceecccCceeEEEEEcCC-Cc--EEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeC------cee
Q 013018          349 STDNKLGEGGFGEVYKGVLPS-GQ--EIAVKRLSRS--SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEG------EEK  417 (451)
Q Consensus       349 ~~~~~lG~G~fg~V~~~~l~~-g~--~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~------~~~  417 (451)
                      ...++||+|+||.||+|.... +.  .+|+|.++..  .....+.+.+|+.++.+++|+||+++++.+...      ...
T Consensus         2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~   81 (272)
T cd05075           2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSP   81 (272)
T ss_pred             ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCc
Confidence            456889999999999999644 33  5899988654  334457899999999999999999999988542      246


Q ss_pred             eEEEeccCCCCHHHHHhccCC---CCCCchhhh
Q 013018          418 ILVYEFVPNKSLDYFLYAQSP---KNNNNWIGQ  447 (451)
Q Consensus       418 ~lv~ey~~~GsL~~~L~~~~~---~~~l~W~~r  447 (451)
                      ++++||+++|+|.+++...+.   ...++|...
T Consensus        82 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~  114 (272)
T cd05075          82 VVILPFMKHGDLHSFLLYSRLGDCPQYLPTQML  114 (272)
T ss_pred             EEEEEeCCCCcHHHHHHHhcccCCcccCCHHHH
Confidence            899999999999999864321   223566543

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=98.89  E-value=6.5e-09  Score=101.56  Aligned_cols=86  Identities=26%  Similarity=0.329  Sum_probs=72.4

Q ss_pred             ceecccCceeEEEEEc-CCCcEEEEEEeccC---ChhhHHHHHHHHHHHhcC-CCCCcccceeEEEeCceeeEEEeccCC
Q 013018          352 NKLGEGGFGEVYKGVL-PSGQEIAVKRLSRS---SGQGGQEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKILVYEFVPN  426 (451)
Q Consensus       352 ~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lv~ey~~~  426 (451)
                      +.||+|+||.||++.. .+++.||||.+...   .....+.+..|..++..+ +||||+++++++...+..++||||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~   80 (320)
T cd05590           1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG   80 (320)
T ss_pred             CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence            4699999999999994 46889999998643   123346678898888876 699999999999999999999999999


Q ss_pred             CCHHHHHhccC
Q 013018          427 KSLDYFLYAQS  437 (451)
Q Consensus       427 GsL~~~L~~~~  437 (451)
                      |+|.++++..+
T Consensus        81 g~L~~~i~~~~   91 (320)
T cd05590          81 GDLMFHIQKSR   91 (320)
T ss_pred             chHHHHHHHcC
Confidence            99999998644

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=98.89  E-value=1.4e-08  Score=95.09  Aligned_cols=97  Identities=24%  Similarity=0.374  Sum_probs=82.2

Q ss_pred             ccccceecccCceeEEEEEc-CCCcEEEEEEeccCCh--hhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEecc
Q 013018          348 FSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSG--QGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFV  424 (451)
Q Consensus       348 ~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~  424 (451)
                      |+..+.||+|.+|.||++.. ..++.+++|.+.....  ...+.+.+|++++.+++|+|++++++++......++++||+
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~   81 (254)
T cd06627           2 YQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEYA   81 (254)
T ss_pred             ceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEecC
Confidence            56678999999999999984 4678999999976543  44578999999999999999999999999888999999999


Q ss_pred             CCCCHHHHHhccCCCCCCchhhh
Q 013018          425 PNKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       425 ~~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                      ++++|.+++...   ..++|..+
T Consensus        82 ~~~~L~~~~~~~---~~l~~~~~  101 (254)
T cd06627          82 ENGSLRQIIKKF---GPFPESLV  101 (254)
T ss_pred             CCCcHHHHHHhc---cCCCHHHH
Confidence            999999999864   23566554

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=98.88  E-value=5.9e-09  Score=100.67  Aligned_cols=87  Identities=31%  Similarity=0.394  Sum_probs=75.8

Q ss_pred             cccceecccCceeEEEEEc-CCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEeccCCC
Q 013018          349 STDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNK  427 (451)
Q Consensus       349 ~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~~~G  427 (451)
                      .....||+|+||.||++.. .+++.+++|.+........+.+.+|+.++..++||||+++++.+..++..++++||++++
T Consensus        24 ~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~  103 (297)
T cd06659          24 ENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGG  103 (297)
T ss_pred             HhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCC
Confidence            3345799999999999984 468899999997654445567899999999999999999999999999999999999999


Q ss_pred             CHHHHHhc
Q 013018          428 SLDYFLYA  435 (451)
Q Consensus       428 sL~~~L~~  435 (451)
                      +|.+++..
T Consensus       104 ~L~~~~~~  111 (297)
T cd06659         104 ALTDIVSQ  111 (297)
T ss_pred             CHHHHHhh
Confidence            99998865

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=98.88  E-value=5.5e-09  Score=100.35  Aligned_cols=111  Identities=23%  Similarity=0.305  Sum_probs=86.5

Q ss_pred             cChHHHHHhhccccccceecccCceeEEEEEc-CCCcEEEEEEeccCChhhHHHHHHHHHHHhcC-CCCCcccceeEEEe
Q 013018          336 FDFETIEVATNNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKL-QHRNLVRLLGFCLE  413 (451)
Q Consensus       336 ~~~~~l~~~~~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~  413 (451)
                      ++..++..+.++|...+.||+|+||.||++.. .+++.+++|.+.... .....+.+|+.++.++ +|||++++++++..
T Consensus        12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~   90 (291)
T cd06639          12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFYK   90 (291)
T ss_pred             hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEe
Confidence            34455566788899999999999999999994 568899999886542 2235678899999998 79999999999875


Q ss_pred             C-----ceeeEEEeccCCCCHHHHHhccC-CCCCCchhhh
Q 013018          414 G-----EEKILVYEFVPNKSLDYFLYAQS-PKNNNNWIGQ  447 (451)
Q Consensus       414 ~-----~~~~lv~ey~~~GsL~~~L~~~~-~~~~l~W~~r  447 (451)
                      .     ...++|+||+++|+|.++++... ....+.|...
T Consensus        91 ~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~  130 (291)
T cd06639          91 ADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMI  130 (291)
T ss_pred             ccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHH
Confidence            4     35789999999999999987532 2234566543

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=98.88  E-value=8.8e-09  Score=98.79  Aligned_cols=89  Identities=21%  Similarity=0.271  Sum_probs=75.4

Q ss_pred             cccccceecccCceeEEEEEc-CCCcEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCcccceeEEEeC--ceeeEEEe
Q 013018          347 NFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSS-GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEG--EEKILVYE  422 (451)
Q Consensus       347 ~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~--~~~~lv~e  422 (451)
                      +|...+.||.|++|.||++.. ..++.+++|.+.... ......+.+|++++++++||||+++++++...  ...++|||
T Consensus         2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e   81 (287)
T cd06621           2 KIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAME   81 (287)
T ss_pred             ceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEE
Confidence            567788999999999999995 467899999987543 23456799999999999999999999988653  36889999


Q ss_pred             ccCCCCHHHHHhc
Q 013018          423 FVPNKSLDYFLYA  435 (451)
Q Consensus       423 y~~~GsL~~~L~~  435 (451)
                      |+++++|.+++..
T Consensus        82 ~~~~~~L~~~l~~   94 (287)
T cd06621          82 YCEGGSLDSIYKK   94 (287)
T ss_pred             ecCCCCHHHHHHH
Confidence            9999999998875

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=98.88  E-value=1e-08  Score=100.52  Aligned_cols=86  Identities=20%  Similarity=0.219  Sum_probs=72.8

Q ss_pred             ceecccCceeEEEEEc-CCCcEEEEEEeccCC---hhhHHHHHHHHHHHhcC-CCCCcccceeEEEeCceeeEEEeccCC
Q 013018          352 NKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSS---GQGGQEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKILVYEFVPN  426 (451)
Q Consensus       352 ~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lv~ey~~~  426 (451)
                      +.||+|+||.||++.. .+++.+|+|.+....   ....+.+.+|+.++.++ +||||+++.+++...+..+|||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG   80 (327)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence            4799999999999994 567899999997542   23345688999999888 699999999999889999999999999


Q ss_pred             CCHHHHHhccC
Q 013018          427 KSLDYFLYAQS  437 (451)
Q Consensus       427 GsL~~~L~~~~  437 (451)
                      |+|.+++...+
T Consensus        81 ~~L~~~~~~~~   91 (327)
T cd05617          81 GDLMFHMQRQR   91 (327)
T ss_pred             CcHHHHHHHcC
Confidence            99999887543

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=98.88  E-value=1e-08  Score=96.43  Aligned_cols=100  Identities=19%  Similarity=0.290  Sum_probs=80.1

Q ss_pred             ccccceecccCceeEEEEE-cCCCcEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCcccceeEEEe--CceeeEEEe
Q 013018          348 FSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRS--SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLE--GEEKILVYE  422 (451)
Q Consensus       348 ~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~--~~~~~lv~e  422 (451)
                      |+..+.||+|+||.||++. ..++..+++|.+...  .....+.+.+|+.++++++|+||+++++.+..  ....++++|
T Consensus         2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~e   81 (265)
T cd08217           2 YEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVME   81 (265)
T ss_pred             ceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEeh
Confidence            5667899999999999998 457789999998643  33345678999999999999999999997764  346789999


Q ss_pred             ccCCCCHHHHHhccC-CCCCCchhhh
Q 013018          423 FVPNKSLDYFLYAQS-PKNNNNWIGQ  447 (451)
Q Consensus       423 y~~~GsL~~~L~~~~-~~~~l~W~~r  447 (451)
                      |+++++|.+++.... ....++|...
T Consensus        82 ~~~~~~L~~~l~~~~~~~~~l~~~~~  107 (265)
T cd08217          82 YCEGGDLAQLIQKCKKERKYIEEEFI  107 (265)
T ss_pred             hccCCCHHHHHHHHhhcccCCCHHHH
Confidence            999999999998643 2345666543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=98.88  E-value=5.7e-09  Score=113.23  Aligned_cols=103  Identities=20%  Similarity=0.261  Sum_probs=81.7

Q ss_pred             HhhccccccceecccCceeEEEEE-cCCCcEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCcccceeEEEe--Ccee
Q 013018          343 VATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRS--SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLE--GEEK  417 (451)
Q Consensus       343 ~~~~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~--~~~~  417 (451)
                      ...++|...+.||+|+||.||++. ...+..+++|.+...  .......|..|+.++.+++|||||++++++..  ...+
T Consensus        10 ~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~l   89 (1021)
T PTZ00266         10 SRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKL   89 (1021)
T ss_pred             cccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEE
Confidence            344678889999999999999999 456778999988643  23345679999999999999999999998754  3568


Q ss_pred             eEEEeccCCCCHHHHHhccCC-CCCCchh
Q 013018          418 ILVYEFVPNKSLDYFLYAQSP-KNNNNWI  445 (451)
Q Consensus       418 ~lv~ey~~~GsL~~~L~~~~~-~~~l~W~  445 (451)
                      +|||||+++|+|.++|..... ...++|.
T Consensus        90 yIVMEY~~gGSL~~lL~k~~~~~g~L~E~  118 (1021)
T PTZ00266         90 YILMEFCDAGDLSRNIQKCYKMFGKIEEH  118 (1021)
T ss_pred             EEEEeCCCCCcHHHHHHHHhhccCCCCHH
Confidence            999999999999999986322 2335544

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=98.88  E-value=8.8e-09  Score=100.80  Aligned_cols=86  Identities=26%  Similarity=0.322  Sum_probs=70.1

Q ss_pred             ceecccCceeEEEEE-cCCCcEEEEEEeccC---ChhhHHHHHHHHH-HHhcCCCCCcccceeEEEeCceeeEEEeccCC
Q 013018          352 NKLGEGGFGEVYKGV-LPSGQEIAVKRLSRS---SGQGGQEFKNEVV-LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPN  426 (451)
Q Consensus       352 ~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~---~~~~~~~~~~E~~-~l~~l~h~niv~l~g~~~~~~~~~lv~ey~~~  426 (451)
                      +.||+|+||.||++. ..+|+.+|+|++...   ......++..|.. +++.++||||+++.+.+...+..++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG   80 (325)
T ss_pred             CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence            468999999999998 457899999998643   1223345666655 46778999999999999999999999999999


Q ss_pred             CCHHHHHhccC
Q 013018          427 KSLDYFLYAQS  437 (451)
Q Consensus       427 GsL~~~L~~~~  437 (451)
                      |+|..++....
T Consensus        81 ~~L~~~l~~~~   91 (325)
T cd05604          81 GELFFHLQRER   91 (325)
T ss_pred             CCHHHHHHHcC
Confidence            99999987543

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=98.88  E-value=3.1e-09  Score=110.73  Aligned_cols=95  Identities=25%  Similarity=0.412  Sum_probs=79.4

Q ss_pred             HhhccccccceecccCceeEEEEEcCCC-cEEEEEEeccCChhhHHHHHHHHHHHhcCC-CCCcccceeE-EEe------
Q 013018          343 VATNNFSTDNKLGEGGFGEVYKGVLPSG-QEIAVKRLSRSSGQGGQEFKNEVVLVAKLQ-HRNLVRLLGF-CLE------  413 (451)
Q Consensus       343 ~~~~~~~~~~~lG~G~fg~V~~~~l~~g-~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~g~-~~~------  413 (451)
                      +...++++.+.|-+|||+.||.+....+ ..+|+|++-....+..+...+||.+|++|. |+|||.+++. ...      
T Consensus        34 Vg~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~  113 (738)
T KOG1989|consen   34 VGSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNG  113 (738)
T ss_pred             ECCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCc
Confidence            3445567789999999999999996555 999999998777777889999999999996 9999999993 221      


Q ss_pred             CceeeEEEeccCCCCHHHHHhccC
Q 013018          414 GEEKILVYEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       414 ~~~~~lv~ey~~~GsL~~~L~~~~  437 (451)
                      .-+.+|+||||++|+|-+||..+.
T Consensus       114 ~~EvllLmEyC~gg~Lvd~mn~Rl  137 (738)
T KOG1989|consen  114 VWEVLLLMEYCKGGSLVDFMNTRL  137 (738)
T ss_pred             eeEEEeehhhccCCcHHHHHHHHH
Confidence            136789999999999999998643

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=98.88  E-value=9.2e-09  Score=102.66  Aligned_cols=89  Identities=19%  Similarity=0.336  Sum_probs=74.3

Q ss_pred             cccccceecccCceeEEEEE-cCCCcEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCc-----eee
Q 013018          347 NFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRS--SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGE-----EKI  418 (451)
Q Consensus       347 ~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~-----~~~  418 (451)
                      +|+..++||+|+||.||++. ..+++.||||.+...  .......+.+|+.++..++|+||+++++++...+     ..+
T Consensus         1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~   80 (372)
T cd07853           1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY   80 (372)
T ss_pred             CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence            36778999999999999999 457899999998643  2233467899999999999999999999988765     789


Q ss_pred             EEEeccCCCCHHHHHhcc
Q 013018          419 LVYEFVPNKSLDYFLYAQ  436 (451)
Q Consensus       419 lv~ey~~~GsL~~~L~~~  436 (451)
                      +|+||++ ++|.+++...
T Consensus        81 lv~e~~~-~~l~~~~~~~   97 (372)
T cd07853          81 VVTELMQ-SDLHKIIVSP   97 (372)
T ss_pred             EEeeccc-cCHHHHHhcC
Confidence            9999996 6888888654

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=98.87  E-value=9.3e-09  Score=100.43  Aligned_cols=85  Identities=26%  Similarity=0.334  Sum_probs=69.4

Q ss_pred             ceecccCceeEEEEEc-CCCcEEEEEEeccCC---hhhHHHHHHHHH-HHhcCCCCCcccceeEEEeCceeeEEEeccCC
Q 013018          352 NKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSS---GQGGQEFKNEVV-LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPN  426 (451)
Q Consensus       352 ~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~---~~~~~~~~~E~~-~l~~l~h~niv~l~g~~~~~~~~~lv~ey~~~  426 (451)
                      ++||+|+||.||++.. .+++.+|+|.+....   .....++..|.. +++.++||||+++++.+...+..++|+||+++
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~   80 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG   80 (321)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            4799999999999994 568899999986432   122345566654 57889999999999999989999999999999


Q ss_pred             CCHHHHHhcc
Q 013018          427 KSLDYFLYAQ  436 (451)
Q Consensus       427 GsL~~~L~~~  436 (451)
                      |+|..++...
T Consensus        81 ~~L~~~l~~~   90 (321)
T cd05603          81 GELFFHLQRE   90 (321)
T ss_pred             CCHHHHHHHc
Confidence            9999988754

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=98.87  E-value=8.8e-09  Score=98.42  Aligned_cols=99  Identities=31%  Similarity=0.461  Sum_probs=76.5

Q ss_pred             ccccccceecccCceeEEEEEc-CCCc----EEEEEEeccCCh-hhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeE
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVL-PSGQ----EIAVKRLSRSSG-QGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKIL  419 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l-~~g~----~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l  419 (451)
                      ++|...+.||+|+||.||+|.+ .+++    .+++|.+..... ....++..|+..++++.||||++++|++. ....++
T Consensus         7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~~~~~~   85 (279)
T cd05111           7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICP-GASLQL   85 (279)
T ss_pred             hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEEC-CCccEE
Confidence            3566788999999999999985 3444    478888764432 23467888999999999999999999875 456789


Q ss_pred             EEeccCCCCHHHHHhccCCCCCCchhhh
Q 013018          420 VYEFVPNKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       420 v~ey~~~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                      ++||+++|+|.++++....  .++|...
T Consensus        86 i~e~~~~gsL~~~l~~~~~--~~~~~~~  111 (279)
T cd05111          86 VTQLSPLGSLLDHVRQHRD--SLDPQRL  111 (279)
T ss_pred             EEEeCCCCcHHHHHHhccc--CCCHHHH
Confidence            9999999999999986432  3566543

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=98.87  E-value=9.2e-09  Score=98.35  Aligned_cols=97  Identities=32%  Similarity=0.448  Sum_probs=77.8

Q ss_pred             ccccceecccCceeEEEEEc-----CCCcEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCcccceeEEEeC--ceeeE
Q 013018          348 FSTDNKLGEGGFGEVYKGVL-----PSGQEIAVKRLSRSS-GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEG--EEKIL  419 (451)
Q Consensus       348 ~~~~~~lG~G~fg~V~~~~l-----~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~--~~~~l  419 (451)
                      ++..+.||+|+||.||.+.+     .++..||+|.+.... ......|.+|+.++++++||||+++.+++...  ...++
T Consensus         6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   85 (283)
T cd05080           6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQL   85 (283)
T ss_pred             ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEE
Confidence            36778999999999987652     357789999987543 23457789999999999999999999987653  35789


Q ss_pred             EEeccCCCCHHHHHhccCCCCCCchhhhh
Q 013018          420 VYEFVPNKSLDYFLYAQSPKNNNNWIGQD  448 (451)
Q Consensus       420 v~ey~~~GsL~~~L~~~~~~~~l~W~~r~  448 (451)
                      ++||+++|+|.+++...    .++|.++.
T Consensus        86 v~e~~~~~~l~~~~~~~----~l~~~~~~  110 (283)
T cd05080          86 IMEYVPLGSLRDYLPKH----KLNLAQLL  110 (283)
T ss_pred             EecCCCCCCHHHHHHHc----CCCHHHHH
Confidence            99999999999999753    26665543

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=98.87  E-value=9.4e-09  Score=98.12  Aligned_cols=100  Identities=20%  Similarity=0.234  Sum_probs=77.6

Q ss_pred             ccccccceecccCceeEEEEEc-CCCcEEEEEEeccCC-hhhHHHHHHHHHH-HhcCCCCCcccceeEEEeCceeeEEEe
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSS-GQGGQEFKNEVVL-VAKLQHRNLVRLLGFCLEGEEKILVYE  422 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~-~~~~~~~~~E~~~-l~~l~h~niv~l~g~~~~~~~~~lv~e  422 (451)
                      ++|+..+.||+|+||.||++.. .+|+.||+|++.... .+...++..|+.+ ++.++||||+++++.+......++++|
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e   80 (283)
T cd06617           1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME   80 (283)
T ss_pred             CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence            3577789999999999999994 468999999987542 2233456667665 556689999999999999899999999


Q ss_pred             ccCCCCHHHHHhccC-CCCCCchhh
Q 013018          423 FVPNKSLDYFLYAQS-PKNNNNWIG  446 (451)
Q Consensus       423 y~~~GsL~~~L~~~~-~~~~l~W~~  446 (451)
                      |++ |+|.++++... .+..++|.+
T Consensus        81 ~~~-~~l~~~l~~~~~~~~~~~~~~  104 (283)
T cd06617          81 VMD-TSLDKFYKKVYDKGLTIPEDI  104 (283)
T ss_pred             hhc-ccHHHHHHHhccCCCCCCHHH
Confidence            996 78999887633 234466654

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=98.87  E-value=1.1e-08  Score=100.03  Aligned_cols=91  Identities=21%  Similarity=0.201  Sum_probs=74.6

Q ss_pred             cccccceecccCceeEEEEEc-CCCcEEEEEEeccCC---hhhHHHHHHHHHHHhcC-CCCCcccceeEEEeCceeeEEE
Q 013018          347 NFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSS---GQGGQEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKILVY  421 (451)
Q Consensus       347 ~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lv~  421 (451)
                      +|...+.||+|+||.||++.. .+++.+|+|.+....   ....+.+..|..++..+ +|++|+++.+++...+..++||
T Consensus         1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (323)
T cd05616           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM   80 (323)
T ss_pred             CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence            366788999999999999984 467899999987532   22335577788888777 6899999999999889999999


Q ss_pred             eccCCCCHHHHHhccC
Q 013018          422 EFVPNKSLDYFLYAQS  437 (451)
Q Consensus       422 ey~~~GsL~~~L~~~~  437 (451)
                      ||+++|+|.+++....
T Consensus        81 E~~~~g~L~~~~~~~~   96 (323)
T cd05616          81 EYVNGGDLMYQIQQVG   96 (323)
T ss_pred             cCCCCCCHHHHHHHcC
Confidence            9999999999997643

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=98.87  E-value=1.1e-08  Score=96.31  Aligned_cols=99  Identities=27%  Similarity=0.396  Sum_probs=80.1

Q ss_pred             ccccccceecccCceeEEEEEcCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEe-CceeeEEEecc
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLE-GEEKILVYEFV  424 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~~lv~ey~  424 (451)
                      ++|...+.||+|+||.||++.. .|..+++|.+....  ..+.|.+|+.++++++|+|++++++++.. .+..++++||+
T Consensus         6 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~~k~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~   82 (256)
T cd05082           6 KELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM   82 (256)
T ss_pred             HhCeeeeeecccCCCeEEEEEE-cCCcEEEEEeCCCc--hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECC
Confidence            4577789999999999999987 57889999886442  34679999999999999999999998654 45689999999


Q ss_pred             CCCCHHHHHhccCCCCCCchhhhh
Q 013018          425 PNKSLDYFLYAQSPKNNNNWIGQD  448 (451)
Q Consensus       425 ~~GsL~~~L~~~~~~~~l~W~~r~  448 (451)
                      ++|+|.++++.+.. ..++|.+.+
T Consensus        83 ~~~~L~~~~~~~~~-~~~~~~~~~  105 (256)
T cd05082          83 AKGSLVDYLRSRGR-SVLGGDCLL  105 (256)
T ss_pred             CCCcHHHHHHhcCC-CCCCHHHHH
Confidence            99999999986432 335665443

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=98.87  E-value=7.9e-09  Score=98.75  Aligned_cols=98  Identities=29%  Similarity=0.427  Sum_probs=79.6

Q ss_pred             cccccceecccCceeEEEEEc-CCCcEEEEEEeccCC--hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEec
Q 013018          347 NFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSS--GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  423 (451)
Q Consensus       347 ~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey  423 (451)
                      +|+..+.||+|++|.||++.. .++..++||.+....  ......+.+|+.++++++||||+++++++...+..++|+||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (284)
T cd07860           1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF   80 (284)
T ss_pred             CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence            366788999999999999984 568899999886442  22335789999999999999999999999988999999999


Q ss_pred             cCCCCHHHHHhccCCCCCCchhh
Q 013018          424 VPNKSLDYFLYAQSPKNNNNWIG  446 (451)
Q Consensus       424 ~~~GsL~~~L~~~~~~~~l~W~~  446 (451)
                      ++ ++|.+++..... ..++|..
T Consensus        81 ~~-~~l~~~~~~~~~-~~l~~~~  101 (284)
T cd07860          81 LH-QDLKKFMDASPL-SGIPLPL  101 (284)
T ss_pred             cc-cCHHHHHHhCCC-CCCCHHH
Confidence            95 689999876432 3355543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=98.87  E-value=1e-08  Score=96.62  Aligned_cols=83  Identities=33%  Similarity=0.518  Sum_probs=69.8

Q ss_pred             eecccCceeEEEEEc---CCCcEEEEEEeccCC--hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEeccCCC
Q 013018          353 KLGEGGFGEVYKGVL---PSGQEIAVKRLSRSS--GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNK  427 (451)
Q Consensus       353 ~lG~G~fg~V~~~~l---~~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~~~G  427 (451)
                      +||+|+||.||+|.+   .++..+++|.+....  ....+++.+|+.++++++||||++++|++. .+..++|+||+++|
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~   80 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG   80 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence            689999999999974   356789999986442  234578999999999999999999999875 45678999999999


Q ss_pred             CHHHHHhcc
Q 013018          428 SLDYFLYAQ  436 (451)
Q Consensus       428 sL~~~L~~~  436 (451)
                      +|.+++...
T Consensus        81 ~L~~~l~~~   89 (257)
T cd05116          81 PLNKFLQKN   89 (257)
T ss_pred             cHHHHHHhc
Confidence            999999754

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=98.86  E-value=1.2e-08  Score=97.40  Aligned_cols=93  Identities=27%  Similarity=0.357  Sum_probs=75.5

Q ss_pred             ecccCceeEEEEE-cCCCcEEEEEEeccCC---hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEeccCCCCH
Q 013018          354 LGEGGFGEVYKGV-LPSGQEIAVKRLSRSS---GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSL  429 (451)
Q Consensus       354 lG~G~fg~V~~~~-l~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~~~GsL  429 (451)
                      ||+|+||.||++. ..+|+.+++|.+....   ......+.+|++++.+++||||+++.+.+...+..++|+||+++++|
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL   80 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence            6899999999998 4568899999986432   22235678899999999999999999999888899999999999999


Q ss_pred             HHHHhccCCCCCCchhhh
Q 013018          430 DYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       430 ~~~L~~~~~~~~l~W~~r  447 (451)
                      .+++..... ..+++.+.
T Consensus        81 ~~~l~~~~~-~~~~~~~~   97 (277)
T cd05577          81 KYHIYNVGE-PGFPEARA   97 (277)
T ss_pred             HHHHHHcCc-CCCCHHHH
Confidence            999986543 23454443

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=98.86  E-value=2e-09  Score=99.89  Aligned_cols=87  Identities=26%  Similarity=0.414  Sum_probs=79.8

Q ss_pred             cceecccCceeEEEEE-cCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCC-CCCcccceeEEEeCceeeEEEeccCCCC
Q 013018          351 DNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQ-HRNLVRLLGFCLEGEEKILVYEFVPNKS  428 (451)
Q Consensus       351 ~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~lv~ey~~~Gs  428 (451)
                      .+.||+|+|+.|..++ +.+|.+.|||++.+.....+....+|++++.+.+ |+||+.|+.++.+....|||+|-|.+|.
T Consensus        83 ~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~GGp  162 (463)
T KOG0607|consen   83 SELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRGGP  162 (463)
T ss_pred             HHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccCch
Confidence            4789999999999998 7899999999998887777788999999999884 9999999999999999999999999999


Q ss_pred             HHHHHhccC
Q 013018          429 LDYFLYAQS  437 (451)
Q Consensus       429 L~~~L~~~~  437 (451)
                      |...|+.++
T Consensus       163 lLshI~~~~  171 (463)
T KOG0607|consen  163 LLSHIQKRK  171 (463)
T ss_pred             HHHHHHHhh
Confidence            999998755

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=98.86  E-value=4.7e-09  Score=103.28  Aligned_cols=86  Identities=27%  Similarity=0.465  Sum_probs=74.4

Q ss_pred             cceecccCceeEEEEE-cCCCcEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEeccCCC
Q 013018          351 DNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRS--SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNK  427 (451)
Q Consensus       351 ~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~~~G  427 (451)
                      .++||.|.||+||-|+ .++|+.||||.+.+.  ..+....+.+|+.+|.+++||.||.|--++...+.+++|||-+ +|
T Consensus       569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl-~G  647 (888)
T KOG4236|consen  569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKL-HG  647 (888)
T ss_pred             HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhh-cc
Confidence            5789999999999999 678999999999754  3445578999999999999999999999999999999999998 66


Q ss_pred             CHHHHHhccC
Q 013018          428 SLDYFLYAQS  437 (451)
Q Consensus       428 sL~~~L~~~~  437 (451)
                      ++.+.|-...
T Consensus       648 DMLEMILSsE  657 (888)
T KOG4236|consen  648 DMLEMILSSE  657 (888)
T ss_pred             hHHHHHHHhh
Confidence            7777666533

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.86  E-value=9.5e-10  Score=106.11  Aligned_cols=92  Identities=20%  Similarity=0.372  Sum_probs=81.1

Q ss_pred             cccccceecccCceeEEEEE-cCCCcEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEecc
Q 013018          347 NFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRS-SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFV  424 (451)
Q Consensus       347 ~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~  424 (451)
                      .|+..+.||+|.||.||||. ...++.||+|.+... ...+.++..+|+.++.+++++||.+++|.+..+..+|++|||+
T Consensus        14 ~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~   93 (467)
T KOG0201|consen   14 LYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYC   93 (467)
T ss_pred             ccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHh
Confidence            35666899999999999999 557889999999754 3445688999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhccCC
Q 013018          425 PNKSLDYFLYAQSP  438 (451)
Q Consensus       425 ~~GsL~~~L~~~~~  438 (451)
                      .+|++.+.|+....
T Consensus        94 ~gGsv~~lL~~~~~  107 (467)
T KOG0201|consen   94 GGGSVLDLLKSGNI  107 (467)
T ss_pred             cCcchhhhhccCCC
Confidence            99999999986543

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=98.86  E-value=1.1e-08  Score=96.89  Aligned_cols=88  Identities=24%  Similarity=0.409  Sum_probs=73.4

Q ss_pred             ccccceecccCceeEEEEEcCC--CcEEEEEEeccC----------ChhhHHHHHHHHHHHhc-CCCCCcccceeEEEeC
Q 013018          348 FSTDNKLGEGGFGEVYKGVLPS--GQEIAVKRLSRS----------SGQGGQEFKNEVVLVAK-LQHRNLVRLLGFCLEG  414 (451)
Q Consensus       348 ~~~~~~lG~G~fg~V~~~~l~~--g~~vavK~l~~~----------~~~~~~~~~~E~~~l~~-l~h~niv~l~g~~~~~  414 (451)
                      |+..+.||+|+||.||++....  ++.+++|.+...          ......++.+|+.++.+ ++||||+++++.+...
T Consensus         2 y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~   81 (269)
T cd08528           2 YAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLEN   81 (269)
T ss_pred             chhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccC
Confidence            5677899999999999999654  678999987532          12223567889988875 7999999999999999


Q ss_pred             ceeeEEEeccCCCCHHHHHhc
Q 013018          415 EEKILVYEFVPNKSLDYFLYA  435 (451)
Q Consensus       415 ~~~~lv~ey~~~GsL~~~L~~  435 (451)
                      +..++++||+++++|.+++..
T Consensus        82 ~~~~lv~e~~~~~~l~~~l~~  102 (269)
T cd08528          82 DRLYIVMDLIEGAPLGEHFNS  102 (269)
T ss_pred             CeEEEEEecCCCCcHHHHHHH
Confidence            999999999999999999865

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=98.86  E-value=1.4e-08  Score=99.39  Aligned_cols=86  Identities=23%  Similarity=0.325  Sum_probs=69.9

Q ss_pred             ceecccCceeEEEEEc-CCCcEEEEEEeccCC---hhhHHHHHHHHH-HHhcCCCCCcccceeEEEeCceeeEEEeccCC
Q 013018          352 NKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSS---GQGGQEFKNEVV-LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPN  426 (451)
Q Consensus       352 ~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~---~~~~~~~~~E~~-~l~~l~h~niv~l~g~~~~~~~~~lv~ey~~~  426 (451)
                      +.||+|+||.||++.. .+|+.||+|.+....   .....++..|.. +++.++||||+++.+.+...+..++||||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence            4699999999999994 578999999986432   122345555554 56789999999999999999999999999999


Q ss_pred             CCHHHHHhccC
Q 013018          427 KSLDYFLYAQS  437 (451)
Q Consensus       427 GsL~~~L~~~~  437 (451)
                      |+|.+++....
T Consensus        81 g~L~~~l~~~~   91 (323)
T cd05575          81 GELFFHLQRER   91 (323)
T ss_pred             CCHHHHHHhcC
Confidence            99999998643

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=98.86  E-value=1.1e-08  Score=98.17  Aligned_cols=91  Identities=26%  Similarity=0.419  Sum_probs=76.7

Q ss_pred             ccccccceecccCceeEEEEEc-CCCcEEEEEEeccCCh-hhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEec
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSG-QGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  423 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey  423 (451)
                      ++|+..+.||+|++|.||++.. .+++.+++|.+..... .....+.+|+.++++++|+||+++++++...+..++|+||
T Consensus         5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   84 (291)
T cd07844           5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY   84 (291)
T ss_pred             cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence            4577789999999999999995 4688999999865422 2234678899999999999999999999988999999999


Q ss_pred             cCCCCHHHHHhccC
Q 013018          424 VPNKSLDYFLYAQS  437 (451)
Q Consensus       424 ~~~GsL~~~L~~~~  437 (451)
                      ++ ++|.+++....
T Consensus        85 ~~-~~L~~~~~~~~   97 (291)
T cd07844          85 LD-TDLKQYMDDCG   97 (291)
T ss_pred             CC-CCHHHHHHhCC
Confidence            98 59999988643

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=98.86  E-value=8.4e-09  Score=99.07  Aligned_cols=91  Identities=27%  Similarity=0.422  Sum_probs=76.4

Q ss_pred             hccccccceecccCceeEEEEEc-CCCcEEEEEEeccCCh-hhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEe
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSG-QGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  422 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  422 (451)
                      +++|...+.||+|+||.||++.. .++..+++|.+..... .....+.+|+.++.+++|+||+++.+++...+..++|+|
T Consensus         4 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e   83 (291)
T cd07870           4 ATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFE   83 (291)
T ss_pred             cceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEe
Confidence            45688889999999999999984 5688999999865432 223467899999999999999999999998889999999


Q ss_pred             ccCCCCHHHHHhcc
Q 013018          423 FVPNKSLDYFLYAQ  436 (451)
Q Consensus       423 y~~~GsL~~~L~~~  436 (451)
                      |+. ++|.+++..+
T Consensus        84 ~~~-~~l~~~~~~~   96 (291)
T cd07870          84 YMH-TDLAQYMIQH   96 (291)
T ss_pred             ccc-CCHHHHHHhC
Confidence            995 7888887654

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=98.86  E-value=1.4e-08  Score=99.01  Aligned_cols=98  Identities=23%  Similarity=0.350  Sum_probs=79.2

Q ss_pred             ccccceecccCceeEEEEEc-CCCcEEEEEEeccCC---hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEec
Q 013018          348 FSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSS---GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  423 (451)
Q Consensus       348 ~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey  423 (451)
                      |+..+.||+|+||.||++.. .++..+++|.+....   .+....+.+|+.++++++|+|++++++++...+..+||+||
T Consensus        27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  106 (317)
T cd06635          27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEY  106 (317)
T ss_pred             hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeC
Confidence            56678999999999999994 568899999986432   22345789999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhccCCCCCCchhhhh
Q 013018          424 VPNKSLDYFLYAQSPKNNNNWIGQD  448 (451)
Q Consensus       424 ~~~GsL~~~L~~~~~~~~l~W~~r~  448 (451)
                      ++ |+|.+++....  ..++|.++.
T Consensus       107 ~~-g~l~~~~~~~~--~~l~~~~~~  128 (317)
T cd06635         107 CL-GSASDLLEVHK--KPLQEVEIA  128 (317)
T ss_pred             CC-CCHHHHHHHhc--CCCCHHHHH
Confidence            96 58888876432  336666543

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=98.86  E-value=8.3e-09  Score=97.32  Aligned_cols=86  Identities=29%  Similarity=0.545  Sum_probs=70.6

Q ss_pred             ceecccCceeEEEEEcC----CCcEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCcccceeEEEe-CceeeEEEeccC
Q 013018          352 NKLGEGGFGEVYKGVLP----SGQEIAVKRLSRS-SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLE-GEEKILVYEFVP  425 (451)
Q Consensus       352 ~~lG~G~fg~V~~~~l~----~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~~lv~ey~~  425 (451)
                      +.||+|+||.||+|...    ....+++|.+... ..+..+.+.+|+.++++++|||++++++.+.. +...++++||++
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~   80 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK   80 (262)
T ss_pred             CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence            46899999999999842    2357999988643 33445789999999999999999999998864 445789999999


Q ss_pred             CCCHHHHHhccC
Q 013018          426 NKSLDYFLYAQS  437 (451)
Q Consensus       426 ~GsL~~~L~~~~  437 (451)
                      +|+|.++++...
T Consensus        81 ~~~L~~~~~~~~   92 (262)
T cd05058          81 HGDLRNFIRSET   92 (262)
T ss_pred             CCCHHHHHHhcC
Confidence            999999998643

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=98.86  E-value=1.2e-08  Score=96.01  Aligned_cols=92  Identities=38%  Similarity=0.563  Sum_probs=74.0

Q ss_pred             ceecccCceeEEEEEcC--C--CcEEEEEEeccCCh-hhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEeccCC
Q 013018          352 NKLGEGGFGEVYKGVLP--S--GQEIAVKRLSRSSG-QGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPN  426 (451)
Q Consensus       352 ~~lG~G~fg~V~~~~l~--~--g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~~~  426 (451)
                      ++||+|+||.||+|...  +  +..+++|.+..... ...+++.+|+.+++++.|+||+++++++. .+..++++||+++
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~   79 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL   79 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence            47999999999999842  2  26899999875543 34567999999999999999999999875 4568999999999


Q ss_pred             CCHHHHHhccCCCCCCchhhh
Q 013018          427 KSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       427 GsL~~~L~~~~~~~~l~W~~r  447 (451)
                      |+|.++|+...   .++|..+
T Consensus        80 ~~L~~~l~~~~---~~~~~~~   97 (257)
T cd05060          80 GPLLKYLKKRR---EIPVSDL   97 (257)
T ss_pred             CcHHHHHHhCC---CCCHHHH
Confidence            99999998654   3555544

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=98.85  E-value=1.1e-08  Score=99.63  Aligned_cols=86  Identities=22%  Similarity=0.295  Sum_probs=70.1

Q ss_pred             ceecccCceeEEEEEc-CCCcEEEEEEeccCC---hhhHHHHHHHHHHHhcC-CCCCcccceeEEEeCceeeEEEeccCC
Q 013018          352 NKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSS---GQGGQEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKILVYEFVPN  426 (451)
Q Consensus       352 ~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lv~ey~~~  426 (451)
                      ++||+|+||.||++.. ..++.||+|.+....   ....+.+..|..++..+ +||||+++++.+...+..++||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g   80 (316)
T cd05592           1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            4699999999999995 467899999987432   22334566777777654 899999999999988999999999999


Q ss_pred             CCHHHHHhccC
Q 013018          427 KSLDYFLYAQS  437 (451)
Q Consensus       427 GsL~~~L~~~~  437 (451)
                      |+|.++++...
T Consensus        81 g~L~~~~~~~~   91 (316)
T cd05592          81 GDLMFHIQSSG   91 (316)
T ss_pred             CcHHHHHHHcC
Confidence            99999997643

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=98.85  E-value=7.5e-09  Score=98.45  Aligned_cols=98  Identities=21%  Similarity=0.301  Sum_probs=81.8

Q ss_pred             cccccceecccCceeEEEEEc-CCCcEEEEEEeccC---ChhhHHHHHHHHHHHhcCC-CCCcccceeEEEeCceeeEEE
Q 013018          347 NFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRS---SGQGGQEFKNEVVLVAKLQ-HRNLVRLLGFCLEGEEKILVY  421 (451)
Q Consensus       347 ~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~lv~  421 (451)
                      +|...+.||+|+||.||++.. .++..+++|.+...   .....+.+.+|..++.+++ |+||+++++.+...+..++++
T Consensus         2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~   81 (280)
T cd05581           2 DFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVL   81 (280)
T ss_pred             CceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEE
Confidence            567788999999999999995 47899999998653   2233467889999999998 999999999998888999999


Q ss_pred             eccCCCCHHHHHhccCCCCCCchhhh
Q 013018          422 EFVPNKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       422 ey~~~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                      ||+++++|.+++....   .++|...
T Consensus        82 e~~~~~~L~~~l~~~~---~l~~~~~  104 (280)
T cd05581          82 EYAPNGELLQYIRKYG---SLDEKCT  104 (280)
T ss_pred             cCCCCCcHHHHHHHcC---CCCHHHH
Confidence            9999999999998653   3555443

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=98.85  E-value=3.5e-09  Score=107.02  Aligned_cols=91  Identities=26%  Similarity=0.420  Sum_probs=80.3

Q ss_pred             ccccceecccCceeEEEEE-cCCCcEEEEEEeccCC---hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEec
Q 013018          348 FSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSS---GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  423 (451)
Q Consensus       348 ~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey  423 (451)
                      ++.++.||+|+-|.|-.|+ ...|+.+|||++....   ......+.+|+.+|+-+.||||++|+.+.....++|||.||
T Consensus        14 wkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlEy   93 (786)
T KOG0588|consen   14 WKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLEY   93 (786)
T ss_pred             eeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEEe
Confidence            4667899999999999999 6789999999997652   22235688999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhccCC
Q 013018          424 VPNKSLDYFLYAQSP  438 (451)
Q Consensus       424 ~~~GsL~~~L~~~~~  438 (451)
                      +++|.|.++|..+++
T Consensus        94 v~gGELFdylv~kG~  108 (786)
T KOG0588|consen   94 VPGGELFDYLVRKGP  108 (786)
T ss_pred             cCCchhHHHHHhhCC
Confidence            999999999997665

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=98.85  E-value=1e-08  Score=96.27  Aligned_cols=97  Identities=33%  Similarity=0.523  Sum_probs=78.9

Q ss_pred             ccccccceecccCceeEEEEEcCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEeccC
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVP  425 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~~  425 (451)
                      ++|+..+.||+|+||.||++.. .++.+++|.+....  ..+.+.+|+.++.+++|||++++.+.+.. +..++++||++
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~~v~e~~~   81 (254)
T cd05083           6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILH-NGLYIVMELMS   81 (254)
T ss_pred             HHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcC-CCcEEEEECCC
Confidence            3467789999999999999986 67889999886432  34678999999999999999999998865 45789999999


Q ss_pred             CCCHHHHHhccCCCCCCchhhh
Q 013018          426 NKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       426 ~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                      +|+|.++++.... ..++|.++
T Consensus        82 ~~~L~~~l~~~~~-~~~~~~~~  102 (254)
T cd05083          82 KGNLVNFLRTRGR-ALVSVIQL  102 (254)
T ss_pred             CCCHHHHHHhcCc-CCCCHHHH
Confidence            9999999986432 33555544

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=98.84  E-value=8e-09  Score=107.39  Aligned_cols=106  Identities=25%  Similarity=0.411  Sum_probs=86.5

Q ss_pred             ChHHHHHhhccccccceecccCceeEEEEE-cCCCcEEEEEEeccCChhhHHHHHHHHHHHhcC-CCCCcccceeEEEe-
Q 013018          337 DFETIEVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKL-QHRNLVRLLGFCLE-  413 (451)
Q Consensus       337 ~~~~l~~~~~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~-  413 (451)
                      +++.+...++.+.+.++||+|.+|.||+++ .++++.+|+|++..... ..++...|..+++.. +|||++.++|+... 
T Consensus        10 ~~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d-~deEiE~eynil~~~~~hpnv~~fyg~~~k~   88 (953)
T KOG0587|consen   10 DLSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTED-EEEEIELEYNMLKKYSHHPNVATFYGAFIKK   88 (953)
T ss_pred             chhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCcc-ccHHHHHHHHHHHhccCCCCcceEEEEEEEe
Confidence            344555567778889999999999999999 77899999999876543 336677888888877 69999999999864 


Q ss_pred             ----CceeeEEEeccCCCCHHHHHhccCCCCCCch
Q 013018          414 ----GEEKILVYEFVPNKSLDYFLYAQSPKNNNNW  444 (451)
Q Consensus       414 ----~~~~~lv~ey~~~GsL~~~L~~~~~~~~l~W  444 (451)
                          ++++|||||||.+||.-++++.-. +..++|
T Consensus        89 ~~~~~DqLWLVMEfC~gGSVTDLVKn~~-g~rl~E  122 (953)
T KOG0587|consen   89 DPGNGDQLWLVMEFCGGGSVTDLVKNTK-GNRLKE  122 (953)
T ss_pred             cCCCCCeEEEEeeccCCccHHHHHhhhc-ccchhh
Confidence                568999999999999999999755 444655

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=98.84  E-value=1.9e-08  Score=96.40  Aligned_cols=88  Identities=30%  Similarity=0.423  Sum_probs=77.5

Q ss_pred             ccccceecccCceeEEEEE-cCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEeccCC
Q 013018          348 FSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPN  426 (451)
Q Consensus       348 ~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~~~  426 (451)
                      +...+.||+|++|.||++. ..+++.+++|.+........+.+.+|+.++.+++||||+++++.+...+..++++||+++
T Consensus        21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~  100 (285)
T cd06648          21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEG  100 (285)
T ss_pred             hhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCC
Confidence            4556799999999999998 457889999998765544556789999999999999999999999888999999999999


Q ss_pred             CCHHHHHhc
Q 013018          427 KSLDYFLYA  435 (451)
Q Consensus       427 GsL~~~L~~  435 (451)
                      ++|.+++..
T Consensus       101 ~~L~~~~~~  109 (285)
T cd06648         101 GALTDIVTH  109 (285)
T ss_pred             CCHHHHHHh
Confidence            999999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=98.84  E-value=6.6e-09  Score=99.33  Aligned_cols=89  Identities=33%  Similarity=0.534  Sum_probs=75.8

Q ss_pred             cccccceecccCceeEEEEEcC------CCcEEEEEEeccCChh-hHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeE
Q 013018          347 NFSTDNKLGEGGFGEVYKGVLP------SGQEIAVKRLSRSSGQ-GGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKIL  419 (451)
Q Consensus       347 ~~~~~~~lG~G~fg~V~~~~l~------~g~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l  419 (451)
                      +|...++||+|+||.||+|...      .+..||+|.+...... ..+.+.+|+.++.+++||||+++++.+...+..++
T Consensus         6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~   85 (283)
T cd05091           6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSM   85 (283)
T ss_pred             HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEE
Confidence            3556789999999999999852      2468999999755332 34678999999999999999999999999899999


Q ss_pred             EEeccCCCCHHHHHhc
Q 013018          420 VYEFVPNKSLDYFLYA  435 (451)
Q Consensus       420 v~ey~~~GsL~~~L~~  435 (451)
                      ++||+++++|.+++..
T Consensus        86 ~~e~~~~~~l~~~l~~  101 (283)
T cd05091          86 IFSYCSHSDLHEFLVM  101 (283)
T ss_pred             EEEcCCCCcHHHHHHh
Confidence            9999999999999964

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=98.84  E-value=8.8e-09  Score=99.87  Aligned_cols=99  Identities=24%  Similarity=0.333  Sum_probs=79.6

Q ss_pred             ccccccceecccCceeEEEEEc-CCCcEEEEEEeccCC---hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEE
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSS---GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  421 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~  421 (451)
                      ..|...++||+|+||.||++.. .+++.|++|.+....   .+...++.+|+.+++.++||||+++.+++...+..++|+
T Consensus        15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~   94 (307)
T cd06607          15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM   94 (307)
T ss_pred             hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence            4477788999999999999984 468899999886432   233467899999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhccCCCCCCchhhh
Q 013018          422 EFVPNKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       422 ey~~~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                      ||++ |+|.+++.....  .++|.+.
T Consensus        95 e~~~-g~l~~~~~~~~~--~l~~~~~  117 (307)
T cd06607          95 EYCL-GSASDILEVHKK--PLQEVEI  117 (307)
T ss_pred             HhhC-CCHHHHHHHccc--CCCHHHH
Confidence            9996 688887764332  3566543

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=98.84  E-value=7e-09  Score=106.41  Aligned_cols=93  Identities=23%  Similarity=0.422  Sum_probs=69.8

Q ss_pred             hhccccccceecccCceeEEEEEc-----------------CCCcEEEEEEeccCChhhHHH--------------HHHH
Q 013018          344 ATNNFSTDNKLGEGGFGEVYKGVL-----------------PSGQEIAVKRLSRSSGQGGQE--------------FKNE  392 (451)
Q Consensus       344 ~~~~~~~~~~lG~G~fg~V~~~~l-----------------~~g~~vavK~l~~~~~~~~~~--------------~~~E  392 (451)
                      ..++|...++||+|+||.||+|..                 ..++.||||++........++              +..|
T Consensus       143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE  222 (507)
T PLN03224        143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE  222 (507)
T ss_pred             cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence            467899999999999999999963                 235679999987543322233              3446


Q ss_pred             HHHHhcCCCCCc-----ccceeEEEe--------CceeeEEEeccCCCCHHHHHhcc
Q 013018          393 VVLVAKLQHRNL-----VRLLGFCLE--------GEEKILVYEFVPNKSLDYFLYAQ  436 (451)
Q Consensus       393 ~~~l~~l~h~ni-----v~l~g~~~~--------~~~~~lv~ey~~~GsL~~~L~~~  436 (451)
                      +..+.+++|.++     ++++|++..        .+..+|||||+++|+|.++|+..
T Consensus       223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~  279 (507)
T PLN03224        223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGK  279 (507)
T ss_pred             HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhc
Confidence            777777766654     677787753        34689999999999999999863

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=98.84  E-value=2.5e-08  Score=92.84  Aligned_cols=97  Identities=32%  Similarity=0.503  Sum_probs=82.8

Q ss_pred             ccccceecccCceeEEEEEcC-CCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEeccCC
Q 013018          348 FSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPN  426 (451)
Q Consensus       348 ~~~~~~lG~G~fg~V~~~~l~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~~~  426 (451)
                      |...+.||+|++|.||++... ++..+++|++..........+.+|+..+++++|+|++++++.+......++++||+++
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~   81 (253)
T cd05122           2 FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSG   81 (253)
T ss_pred             ceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCCC
Confidence            556789999999999999964 6889999999766544567899999999999999999999999988999999999999


Q ss_pred             CCHHHHHhccCCCCCCchhh
Q 013018          427 KSLDYFLYAQSPKNNNNWIG  446 (451)
Q Consensus       427 GsL~~~L~~~~~~~~l~W~~  446 (451)
                      ++|.+++....  ..++|..
T Consensus        82 ~~L~~~~~~~~--~~~~~~~   99 (253)
T cd05122          82 GSLKDLLKSTN--QTLTESQ   99 (253)
T ss_pred             CcHHHHHhhcC--CCCCHHH
Confidence            99999998753  2355544

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=98.83  E-value=1.6e-08  Score=99.12  Aligned_cols=90  Identities=21%  Similarity=0.296  Sum_probs=75.4

Q ss_pred             ccccceecccCceeEEEEEc----CCCcEEEEEEeccCC----hhhHHHHHHHHHHHhcC-CCCCcccceeEEEeCceee
Q 013018          348 FSTDNKLGEGGFGEVYKGVL----PSGQEIAVKRLSRSS----GQGGQEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKI  418 (451)
Q Consensus       348 ~~~~~~lG~G~fg~V~~~~l----~~g~~vavK~l~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~  418 (451)
                      |...+.||+|+||.||++..    ..++.+|+|.+....    ....+.+.+|+.++.++ +|+||+++.+.+...+..+
T Consensus         2 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~   81 (332)
T cd05614           2 FELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKLH   81 (332)
T ss_pred             ceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEEE
Confidence            66788999999999999873    357899999986431    12235688999999999 5999999999998888999


Q ss_pred             EEEeccCCCCHHHHHhccC
Q 013018          419 LVYEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       419 lv~ey~~~GsL~~~L~~~~  437 (451)
                      +|+||+++|+|.+++..+.
T Consensus        82 lv~e~~~~g~L~~~l~~~~  100 (332)
T cd05614          82 LILDYVSGGEMFTHLYQRD  100 (332)
T ss_pred             EEEeCCCCCcHHHHHHHcC
Confidence            9999999999999998643

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=98.83  E-value=1.5e-08  Score=108.77  Aligned_cols=91  Identities=20%  Similarity=0.231  Sum_probs=79.0

Q ss_pred             ccccccceecccCceeEEEEEc-CCCcEEEEEEeccCC---hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEE
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSS---GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  421 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~  421 (451)
                      ++|...++||+|+||.||++.. ..++.||||++....   ......+.+|+.++..++|+||+++++.+......+|||
T Consensus         4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm   83 (669)
T cd05610           4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM   83 (669)
T ss_pred             CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence            5678889999999999999995 468999999986532   223467889999999999999999999998889999999


Q ss_pred             eccCCCCHHHHHhcc
Q 013018          422 EFVPNKSLDYFLYAQ  436 (451)
Q Consensus       422 ey~~~GsL~~~L~~~  436 (451)
                      ||+++|+|.++|+..
T Consensus        84 Ey~~g~~L~~li~~~   98 (669)
T cd05610          84 EYLIGGDVKSLLHIY   98 (669)
T ss_pred             eCCCCCCHHHHHHhc
Confidence            999999999999754

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=98.83  E-value=1.1e-08  Score=97.49  Aligned_cols=92  Identities=30%  Similarity=0.556  Sum_probs=75.7

Q ss_pred             hccccccceecccCceeEEEEEc-CCCc----EEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceee
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGVL-PSGQ----EIAVKRLSRS-SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKI  418 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~l-~~g~----~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~  418 (451)
                      .++|+..++||+|+||.||+|.. .+++    .||+|.+... ......++.+|+.++..++|+||+++++.+.. ...+
T Consensus         6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~   84 (279)
T cd05109           6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STVQ   84 (279)
T ss_pred             hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCcE
Confidence            34577889999999999999984 4454    4899998754 33345789999999999999999999999875 4577


Q ss_pred             EEEeccCCCCHHHHHhccC
Q 013018          419 LVYEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       419 lv~ey~~~GsL~~~L~~~~  437 (451)
                      +++||+++|+|.++++.+.
T Consensus        85 l~~~~~~~g~l~~~l~~~~  103 (279)
T cd05109          85 LVTQLMPYGCLLDYVRENK  103 (279)
T ss_pred             EEEEcCCCCCHHHHHhhcc
Confidence            9999999999999998643

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=98.83  E-value=1.8e-08  Score=96.25  Aligned_cols=99  Identities=25%  Similarity=0.376  Sum_probs=80.1

Q ss_pred             ccccceecccCceeEEEEEc-CCCcEEEEEEeccCC--hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEecc
Q 013018          348 FSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSS--GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFV  424 (451)
Q Consensus       348 ~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~  424 (451)
                      |+..+.||+|.+|.||++.. .+|..+++|++....  ....+.+.+|+.++++++|||++++.+.+...+..++++||+
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~   80 (283)
T cd07835           1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL   80 (283)
T ss_pred             CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence            34568999999999999984 578999999986442  222367889999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhccCCCCCCchhhhh
Q 013018          425 PNKSLDYFLYAQSPKNNNNWIGQD  448 (451)
Q Consensus       425 ~~GsL~~~L~~~~~~~~l~W~~r~  448 (451)
                      + ++|.+++..... ..++|.+++
T Consensus        81 ~-~~l~~~~~~~~~-~~~~~~~~~  102 (283)
T cd07835          81 D-LDLKKYMDSSPL-TGLDPPLIK  102 (283)
T ss_pred             C-cCHHHHHhhCCC-CCCCHHHHH
Confidence            5 699999986442 345665543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=98.83  E-value=6.9e-09  Score=101.13  Aligned_cols=86  Identities=23%  Similarity=0.399  Sum_probs=71.0

Q ss_pred             hhccccccceecccCceeEEEEE-cCCCcEEEEEEeccCCh--h------------hHHHHHHHHHHHhcCCCCCcccce
Q 013018          344 ATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSG--Q------------GGQEFKNEVVLVAKLQHRNLVRLL  408 (451)
Q Consensus       344 ~~~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~--~------------~~~~~~~E~~~l~~l~h~niv~l~  408 (451)
                      ..+.|...+.||+|.||.|-++. ..+++.+|||++.+...  +            ..+...+||.+|++++|||||+|+
T Consensus        95 ~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~Li  174 (576)
T KOG0585|consen   95 QLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLI  174 (576)
T ss_pred             ehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEE
Confidence            34668889999999999999998 56789999999964311  0            125788999999999999999999


Q ss_pred             eEEEe--CceeeEEEeccCCCCH
Q 013018          409 GFCLE--GEEKILVYEFVPNKSL  429 (451)
Q Consensus       409 g~~~~--~~~~~lv~ey~~~GsL  429 (451)
                      .+..+  .+.+|||+|||..|.+
T Consensus       175 EvLDDP~s~~~YlVley~s~G~v  197 (576)
T KOG0585|consen  175 EVLDDPESDKLYLVLEYCSKGEV  197 (576)
T ss_pred             EeecCcccCceEEEEEeccCCcc
Confidence            98865  4579999999988865

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=98.83  E-value=2.3e-08  Score=94.58  Aligned_cols=91  Identities=27%  Similarity=0.453  Sum_probs=75.8

Q ss_pred             ccccccceecccCceeEEEEE-cCCCcEEEEEEeccC-----ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeC--cee
Q 013018          346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRS-----SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEG--EEK  417 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~-----~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~--~~~  417 (451)
                      .+|...+.||+|+||.||++. ..++..+++|.+...     ..+....+.+|+.++++++|+||+++++.+...  ...
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (264)
T cd06653           2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL   81 (264)
T ss_pred             CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence            357788999999999999998 456899999987532     223346789999999999999999999988654  457


Q ss_pred             eEEEeccCCCCHHHHHhcc
Q 013018          418 ILVYEFVPNKSLDYFLYAQ  436 (451)
Q Consensus       418 ~lv~ey~~~GsL~~~L~~~  436 (451)
                      ++++||+++++|.+++...
T Consensus        82 ~~v~e~~~~~~L~~~~~~~  100 (264)
T cd06653          82 SIFVEYMPGGSIKDQLKAY  100 (264)
T ss_pred             EEEEEeCCCCcHHHHHHHc
Confidence            8999999999999999864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=98.83  E-value=1.5e-08  Score=96.10  Aligned_cols=102  Identities=24%  Similarity=0.316  Sum_probs=82.1

Q ss_pred             HhhccccccceecccCceeEEEEEc-CCCcEEEEEEeccCChhhHHHHHHHHHHHhcC-CCCCcccceeEEEeCc-----
Q 013018          343 VATNNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKL-QHRNLVRLLGFCLEGE-----  415 (451)
Q Consensus       343 ~~~~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~-----  415 (451)
                      .++++|+..+.||+|++|.||++.. .+++.+++|.+..... ..+.+.+|+.+++++ +|+||+++++++....     
T Consensus         3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~   81 (275)
T cd06608           3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGND   81 (275)
T ss_pred             CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcc
Confidence            3567889999999999999999995 4678999998875533 346799999999999 6999999999987644     


Q ss_pred             -eeeEEEeccCCCCHHHHHhccC-CCCCCchh
Q 013018          416 -EKILVYEFVPNKSLDYFLYAQS-PKNNNNWI  445 (451)
Q Consensus       416 -~~~lv~ey~~~GsL~~~L~~~~-~~~~l~W~  445 (451)
                       ..++|+||+++++|.++++... .+..+++.
T Consensus        82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~  113 (275)
T cd06608          82 DQLWLVMELCGGGSVTDLVKGLRKKGKRLKEE  113 (275)
T ss_pred             eEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHH
Confidence             4899999999999999988633 12334543

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=98.82  E-value=2.4e-08  Score=93.43  Aligned_cols=101  Identities=21%  Similarity=0.270  Sum_probs=83.3

Q ss_pred             cccccceecccCceeEEEEEc-CCCcEEEEEEeccCCh--hhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEec
Q 013018          347 NFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSG--QGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  423 (451)
Q Consensus       347 ~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey  423 (451)
                      +|...+.||+|+||.||++.. .++..+++|.+.....  ....++.+|++++++++|+|++++.+.....+..++++||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~   80 (258)
T cd08215           1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY   80 (258)
T ss_pred             CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence            356678999999999999995 4688999999975432  4457799999999999999999999999888999999999


Q ss_pred             cCCCCHHHHHhccCC-CCCCchhhh
Q 013018          424 VPNKSLDYFLYAQSP-KNNNNWIGQ  447 (451)
Q Consensus       424 ~~~GsL~~~L~~~~~-~~~l~W~~r  447 (451)
                      +++++|.++++.... ...++|.+.
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~  105 (258)
T cd08215          81 ADGGDLSQKIKKQKKEGKPFPEEQI  105 (258)
T ss_pred             cCCCcHHHHHHHhhccCCCcCHHHH
Confidence            999999999987531 234555543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>PHA03212 serine/threonine kinase US3; Provisional

Probab=98.82  E-value=1.6e-08  Score=101.61  Aligned_cols=86  Identities=15%  Similarity=0.195  Sum_probs=74.2

Q ss_pred             hccccccceecccCceeEEEEE-cCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEec
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  423 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey  423 (451)
                      ..+|+..+.||+|+||.||++. ...++.||+|...      ...+.+|+.++++++||||+++++++......++|+|+
T Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~  164 (391)
T PHA03212         91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPR  164 (391)
T ss_pred             cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEec
Confidence            3568889999999999999998 5678999999653      23578999999999999999999999988899999999


Q ss_pred             cCCCCHHHHHhccC
Q 013018          424 VPNKSLDYFLYAQS  437 (451)
Q Consensus       424 ~~~GsL~~~L~~~~  437 (451)
                      +. ++|.+++....
T Consensus       165 ~~-~~L~~~l~~~~  177 (391)
T PHA03212        165 YK-TDLYCYLAAKR  177 (391)
T ss_pred             CC-CCHHHHHHhcC
Confidence            85 79999987643

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=98.82  E-value=1.5e-08  Score=97.55  Aligned_cols=85  Identities=32%  Similarity=0.426  Sum_probs=75.3

Q ss_pred             cceecccCceeEEEEEc-CCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEeccCCCCH
Q 013018          351 DNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSL  429 (451)
Q Consensus       351 ~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~~~GsL  429 (451)
                      ..+||+|+||.||++.. .+++.++||.+..........+.+|+.++++++|+|++++++.+...+..++++||+++++|
T Consensus        25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L  104 (292)
T cd06657          25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL  104 (292)
T ss_pred             HHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcH
Confidence            36799999999999985 57899999998655545556799999999999999999999999999999999999999999


Q ss_pred             HHHHhc
Q 013018          430 DYFLYA  435 (451)
Q Consensus       430 ~~~L~~  435 (451)
                      .+++..
T Consensus       105 ~~~~~~  110 (292)
T cd06657         105 TDIVTH  110 (292)
T ss_pred             HHHHhc
Confidence            998865

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=98.82  E-value=4.8e-09  Score=103.27  Aligned_cols=92  Identities=20%  Similarity=0.290  Sum_probs=77.8

Q ss_pred             ccccccceecccCceeEEEEEc-CCCcEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCce-eeEEE
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRS--SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEE-KILVY  421 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~-~~lv~  421 (451)
                      ++|...+++|+|+||.++.... .++..+++|.+...  .....+...+|+.++++++|||||.+...+..++. .+|||
T Consensus         4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm   83 (426)
T KOG0589|consen    4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM   83 (426)
T ss_pred             chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence            4566789999999999987763 35678999998744  33444678999999999999999999999988887 89999


Q ss_pred             eccCCCCHHHHHhccC
Q 013018          422 EFVPNKSLDYFLYAQS  437 (451)
Q Consensus       422 ey~~~GsL~~~L~~~~  437 (451)
                      +|+++|+|.+.|...+
T Consensus        84 ~Y~eGg~l~~~i~~~k   99 (426)
T KOG0589|consen   84 EYCEGGDLAQLIKEQK   99 (426)
T ss_pred             eecCCCCHHHHHHHHh
Confidence            9999999999999866

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=98.81  E-value=1.7e-08  Score=98.40  Aligned_cols=85  Identities=25%  Similarity=0.304  Sum_probs=71.2

Q ss_pred             ceecccCceeEEEEEc-CCCcEEEEEEeccCC---hhhHHHHHHHHHHHhcC-CCCCcccceeEEEeCceeeEEEeccCC
Q 013018          352 NKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSS---GQGGQEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKILVYEFVPN  426 (451)
Q Consensus       352 ~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lv~ey~~~  426 (451)
                      ++||+|+||.||++.. .+|+.||+|.++...   ....+.+..|..++..+ +||||+++++.+...+..++||||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~   80 (316)
T cd05620           1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence            4799999999999995 468899999997532   22345677788888764 899999999999999999999999999


Q ss_pred             CCHHHHHhcc
Q 013018          427 KSLDYFLYAQ  436 (451)
Q Consensus       427 GsL~~~L~~~  436 (451)
                      |+|.+++...
T Consensus        81 g~L~~~i~~~   90 (316)
T cd05620          81 GDLMFHIQDK   90 (316)
T ss_pred             CcHHHHHHHc
Confidence            9999999864

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=98.81  E-value=1e-08  Score=98.37  Aligned_cols=93  Identities=24%  Similarity=0.258  Sum_probs=78.5

Q ss_pred             ccccccceecccCceeEEEEEcCC-CcEEEEEEeccCCh---hhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEE
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSRSSG---QGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  421 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l~~-g~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~  421 (451)
                      +.|+..+.||.|..|.||.+.+.+ +...|+|.+.+..-   +.......|-+||+.++||-+..|++....++..+|+|
T Consensus        77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~m  156 (459)
T KOG0610|consen   77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVM  156 (459)
T ss_pred             HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEE
Confidence            345667899999999999999754 47889999976532   23355677889999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhccCC
Q 013018          422 EFVPNKSLDYFLYAQSP  438 (451)
Q Consensus       422 ey~~~GsL~~~L~~~~~  438 (451)
                      |||++|+|+..++.+..
T Consensus       157 eyCpGGdL~~LrqkQp~  173 (459)
T KOG0610|consen  157 EYCPGGDLHSLRQKQPG  173 (459)
T ss_pred             ecCCCccHHHHHhhCCC
Confidence            99999999999887544

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=98.81  E-value=2.3e-08  Score=93.94  Aligned_cols=100  Identities=20%  Similarity=0.183  Sum_probs=79.3

Q ss_pred             cccccceecccCceeEEEEEc-CCCcEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCcccceeEEEe-CceeeEEEe
Q 013018          347 NFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRS--SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLE-GEEKILVYE  422 (451)
Q Consensus       347 ~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~~lv~e  422 (451)
                      +|+..+.||+|++|.||++.. .+++.+++|.+...  .....+.+.+|+.++++++|+|++++.+.+.. ....++++|
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e   80 (257)
T cd08223           1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG   80 (257)
T ss_pred             CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence            366788999999999999984 45788999998643  23345678999999999999999999987654 345789999


Q ss_pred             ccCCCCHHHHHhccCCCCCCchhhh
Q 013018          423 FVPNKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       423 y~~~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                      |+++++|.++++.... ..++|.+.
T Consensus        81 ~~~~~~l~~~l~~~~~-~~l~~~~~  104 (257)
T cd08223          81 FCEGGDLYHKLKEQKG-KLLPENQV  104 (257)
T ss_pred             ccCCCcHHHHHHHhcC-CCCCHHHH
Confidence            9999999999986432 33566544

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=98.81  E-value=1.3e-08  Score=95.31  Aligned_cols=100  Identities=25%  Similarity=0.359  Sum_probs=82.3

Q ss_pred             ccccceecccCceeEEEEE-cCCCcEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEecc
Q 013018          348 FSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRS--SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFV  424 (451)
Q Consensus       348 ~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~  424 (451)
                      |+..++||+|+||.||++. ..+++.+++|.+...  ......++.+|+.++++++|+||+++.+.+......++|+||+
T Consensus         2 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~   81 (256)
T cd08530           2 FKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEYA   81 (256)
T ss_pred             ceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehhc
Confidence            5677899999999999998 457889999998753  2334567889999999999999999999998889999999999


Q ss_pred             CCCCHHHHHhccCC-CCCCchhhh
Q 013018          425 PNKSLDYFLYAQSP-KNNNNWIGQ  447 (451)
Q Consensus       425 ~~GsL~~~L~~~~~-~~~l~W~~r  447 (451)
                      ++++|.+++.+... +..++|...
T Consensus        82 ~~~~L~~~~~~~~~~~~~~~~~~~  105 (256)
T cd08530          82 PFGDLSKAISKRKKKRKLIPEQEI  105 (256)
T ss_pred             CCCCHHHHHHHHHhhcCCCCHHHH
Confidence            99999999987332 234566543

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=98.81  E-value=2e-08  Score=96.59  Aligned_cols=101  Identities=24%  Similarity=0.317  Sum_probs=78.4

Q ss_pred             ccccccceecccCceeEEEEEc-CCCcEEEEEEeccCCh--hhHHHHHHHHHHHhcC-CCCCcccceeEEEeCce-----
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSG--QGGQEFKNEVVLVAKL-QHRNLVRLLGFCLEGEE-----  416 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~-----  416 (451)
                      ++|+..+.||+|+||.||++.. .+++.|++|.+.....  .....+.+|+.++.++ +|+||+++++++...+.     
T Consensus         1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~   80 (295)
T cd07837           1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS   80 (295)
T ss_pred             CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence            3577889999999999999994 5689999998865422  2235788999999999 46999999999877655     


Q ss_pred             eeEEEeccCCCCHHHHHhccCC--CCCCchhhh
Q 013018          417 KILVYEFVPNKSLDYFLYAQSP--KNNNNWIGQ  447 (451)
Q Consensus       417 ~~lv~ey~~~GsL~~~L~~~~~--~~~l~W~~r  447 (451)
                      .++++||+++ +|.+++.....  ...++|.+.
T Consensus        81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~  112 (295)
T cd07837          81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTI  112 (295)
T ss_pred             EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHH
Confidence            7999999985 89999876432  234555443

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=98.80  E-value=1.6e-08  Score=95.16  Aligned_cols=84  Identities=19%  Similarity=0.293  Sum_probs=73.0

Q ss_pred             ecccCceeEEEEEcC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEeccCCCCH
Q 013018          354 LGEGGFGEVYKGVLP-SGQEIAVKRLSRSSG---QGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSL  429 (451)
Q Consensus       354 lG~G~fg~V~~~~l~-~g~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~~~GsL  429 (451)
                      ||+|+||.||++... +++.+++|.+.....   ...+.+.+|+.++.+++|+||+++.+........++++||+++++|
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL   80 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence            689999999999965 489999999865432   3346789999999999999999999999888999999999999999


Q ss_pred             HHHHhccC
Q 013018          430 DYFLYAQS  437 (451)
Q Consensus       430 ~~~L~~~~  437 (451)
                      .+++++..
T Consensus        81 ~~~l~~~~   88 (265)
T cd05579          81 ASLLENVG   88 (265)
T ss_pred             HHHHHHcC
Confidence            99998643

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.80  E-value=4.7e-09  Score=106.40  Aligned_cols=84  Identities=31%  Similarity=0.474  Sum_probs=77.7

Q ss_pred             ceecccCceeEEEEE-cCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEeccCCCCHH
Q 013018          352 NKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLD  430 (451)
Q Consensus       352 ~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~~~GsL~  430 (451)
                      -+||+|.||+||.|. +.+...+|||.+.....+..+.+..||.+-+.|+|+|||+.+|.+..++...|.||-+|+|+|.
T Consensus       581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLS  660 (1226)
T KOG4279|consen  581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLS  660 (1226)
T ss_pred             EEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHH
Confidence            379999999999999 6666789999999887778888999999999999999999999999999999999999999999


Q ss_pred             HHHhc
Q 013018          431 YFLYA  435 (451)
Q Consensus       431 ~~L~~  435 (451)
                      ++|+.
T Consensus       661 sLLrs  665 (1226)
T KOG4279|consen  661 SLLRS  665 (1226)
T ss_pred             HHHHh
Confidence            99996

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=98.80  E-value=1.3e-08  Score=105.49  Aligned_cols=95  Identities=17%  Similarity=0.204  Sum_probs=77.6

Q ss_pred             HhhccccccceecccCceeEEEEE-cCCCcEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCc----
Q 013018          343 VATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRS--SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGE----  415 (451)
Q Consensus       343 ~~~~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~----  415 (451)
                      ...++|...++||+|+||.||++. ..+++.||||.+...  ..+....+.+|+..+..++|+|++++.......+    
T Consensus        29 ~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~  108 (496)
T PTZ00283         29 EQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNP  108 (496)
T ss_pred             ccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCc
Confidence            344678889999999999999998 567899999998654  3344567899999999999999999887654322    


Q ss_pred             ----eeeEEEeccCCCCHHHHHhccC
Q 013018          416 ----EKILVYEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       416 ----~~~lv~ey~~~GsL~~~L~~~~  437 (451)
                          .+++|+||+++|+|.++|+.+.
T Consensus       109 ~~~~~i~lV~Ey~~~gsL~~~l~~~~  134 (496)
T PTZ00283        109 ENVLMIALVLDYANAGDLRQEIKSRA  134 (496)
T ss_pred             ccceEEEEEEeCCCCCcHHHHHHHhh
Confidence                3679999999999999998643

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=98.80  E-value=3.5e-09  Score=100.24  Aligned_cols=83  Identities=30%  Similarity=0.502  Sum_probs=66.9

Q ss_pred             ccccceecccCceeEEEEEc-CCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCc-----eeeEEE
Q 013018          348 FSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGE-----EKILVY  421 (451)
Q Consensus       348 ~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~-----~~~lv~  421 (451)
                      +...+++|.|+||.||+|.+ ..++.||||+.-.+..    ---+|+++|+++.|||||+|+-++....     .+.||+
T Consensus        26 ~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r----~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVl  101 (364)
T KOG0658|consen   26 YEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR----YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVL  101 (364)
T ss_pred             EEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC----cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHH
Confidence            56678999999999999994 5578999998854422    2347899999999999999998776532     234899


Q ss_pred             eccCCCCHHHHHhc
Q 013018          422 EFVPNKSLDYFLYA  435 (451)
Q Consensus       422 ey~~~GsL~~~L~~  435 (451)
                      ||||. +|.++++.
T Consensus       102 eymP~-tL~~~~r~  114 (364)
T KOG0658|consen  102 EYMPE-TLYRVIRH  114 (364)
T ss_pred             HhchH-HHHHHHHH
Confidence            99988 89999995

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=98.80  E-value=1.8e-08  Score=96.28  Aligned_cols=89  Identities=25%  Similarity=0.378  Sum_probs=75.4

Q ss_pred             cccccceecccCceeEEEEEc-CCCcEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEec
Q 013018          347 NFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRS--SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  423 (451)
Q Consensus       347 ~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey  423 (451)
                      +|+..+.||+|+||.||++.. .+++.|++|.++..  .....+.+.+|++++++++|+||+++++.+...+..++++||
T Consensus         2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~   81 (288)
T cd07833           2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEY   81 (288)
T ss_pred             ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEec
Confidence            567789999999999999995 46889999988653  223346799999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhc
Q 013018          424 VPNKSLDYFLYA  435 (451)
Q Consensus       424 ~~~GsL~~~L~~  435 (451)
                      ++++.|..+++.
T Consensus        82 ~~~~~l~~~~~~   93 (288)
T cd07833          82 VERTLLELLEAS   93 (288)
T ss_pred             CCCCHHHHHHhc
Confidence            998777766554

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=98.79  E-value=2.7e-08  Score=97.36  Aligned_cols=86  Identities=22%  Similarity=0.304  Sum_probs=69.0

Q ss_pred             ceecccCceeEEEEEc-CCCcEEEEEEeccCC---hhhHHHHHHHHH-HHhcCCCCCcccceeEEEeCceeeEEEeccCC
Q 013018          352 NKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSS---GQGGQEFKNEVV-LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPN  426 (451)
Q Consensus       352 ~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~---~~~~~~~~~E~~-~l~~l~h~niv~l~g~~~~~~~~~lv~ey~~~  426 (451)
                      +.||+|+||.||++.. .+++.+|+|.+....   .....++..|.. +++.++|+||+++.+.+...+..++|+||+++
T Consensus         1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05602           1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING   80 (325)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence            4699999999999994 467889999986432   122234555544 56778999999999999999999999999999


Q ss_pred             CCHHHHHhccC
Q 013018          427 KSLDYFLYAQS  437 (451)
Q Consensus       427 GsL~~~L~~~~  437 (451)
                      |+|.++++...
T Consensus        81 ~~L~~~~~~~~   91 (325)
T cd05602          81 GELFYHLQRER   91 (325)
T ss_pred             CcHHHHHHhcC
Confidence            99999998643

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=98.79  E-value=2.5e-08  Score=94.09  Aligned_cols=84  Identities=19%  Similarity=0.254  Sum_probs=72.9

Q ss_pred             ecccCceeEEEEEc-CCCcEEEEEEeccCC---hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEeccCCCCH
Q 013018          354 LGEGGFGEVYKGVL-PSGQEIAVKRLSRSS---GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSL  429 (451)
Q Consensus       354 lG~G~fg~V~~~~l-~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~~~GsL  429 (451)
                      ||+|+||.||++.. ..+..+++|.+....   ....+.+.+|+.++++++||||+++++.+..+...++++||+++|+|
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL   80 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence            68999999999995 358899999986542   22346799999999999999999999999988999999999999999


Q ss_pred             HHHHhccC
Q 013018          430 DYFLYAQS  437 (451)
Q Consensus       430 ~~~L~~~~  437 (451)
                      .++|+...
T Consensus        81 ~~~l~~~~   88 (262)
T cd05572          81 WTILRDRG   88 (262)
T ss_pred             HHHHhhcC
Confidence            99998653

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=98.79  E-value=9.4e-09  Score=97.20  Aligned_cols=92  Identities=27%  Similarity=0.445  Sum_probs=77.3

Q ss_pred             ccccccceecccCceeEEEEE-cCCCcEEEEEEeccCChh--hHHHHHHHHHHHhcCCCCC-cccceeEEEeCc------
Q 013018          346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQ--GGQEFKNEVVLVAKLQHRN-LVRLLGFCLEGE------  415 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~~--~~~~~~~E~~~l~~l~h~n-iv~l~g~~~~~~------  415 (451)
                      ..|...++||+|.||.||+|. ..+|+.||+|++.....+  -...-.+|+.++++++|+| ||+|.+++...+      
T Consensus        11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~   90 (323)
T KOG0594|consen   11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIG   90 (323)
T ss_pred             HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccc
Confidence            345566789999999999999 667899999999765432  2356789999999999999 999999999877      


Q ss_pred             eeeEEEeccCCCCHHHHHhccCC
Q 013018          416 EKILVYEFVPNKSLDYFLYAQSP  438 (451)
Q Consensus       416 ~~~lv~ey~~~GsL~~~L~~~~~  438 (451)
                      .++||+||+.. +|..|+....+
T Consensus        91 ~l~lvfe~~d~-DL~~ymd~~~~  112 (323)
T KOG0594|consen   91 KLYLVFEFLDR-DLKKYMDSLPK  112 (323)
T ss_pred             eEEEEEEeecc-cHHHHHHhccc
Confidence            78899999965 99999997553

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=98.78  E-value=2.2e-08  Score=95.61  Aligned_cols=100  Identities=26%  Similarity=0.440  Sum_probs=81.8

Q ss_pred             ChHHHHHhhccccccceecccCceeEEEEEc-CCCcEEEEEEeccCChhhHHHHHHHHHHHhcC-CCCCcccceeEEEe-
Q 013018          337 DFETIEVATNNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKL-QHRNLVRLLGFCLE-  413 (451)
Q Consensus       337 ~~~~l~~~~~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~-  413 (451)
                      ++.++..+.+.|+..+.||+|+||.||++.. ..++.+++|.+.... ....++..|+.++.++ +|+||+++.+.+.. 
T Consensus         7 ~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~   85 (282)
T cd06636           7 DLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIKK   85 (282)
T ss_pred             hhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcc
Confidence            4455556677888889999999999999994 568899999886543 3346788999999998 79999999998853 


Q ss_pred             -----CceeeEEEeccCCCCHHHHHhccC
Q 013018          414 -----GEEKILVYEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       414 -----~~~~~lv~ey~~~GsL~~~L~~~~  437 (451)
                           .+..+++|||+++|+|.+++...+
T Consensus        86 ~~~~~~~~~~iv~e~~~~~~L~~~~~~~~  114 (282)
T cd06636          86 SPPGHDDQLWLVMEFCGAGSVTDLVKNTK  114 (282)
T ss_pred             cccCCCCEEEEEEEeCCCCcHHHHHHHcc
Confidence                 356799999999999999998644

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=98.78  E-value=2.6e-08  Score=96.04  Aligned_cols=101  Identities=23%  Similarity=0.327  Sum_probs=79.2

Q ss_pred             HhhccccccceecccCceeEEEEEc-CCCcEEEEEEeccCC--hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCc----
Q 013018          343 VATNNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSS--GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGE----  415 (451)
Q Consensus       343 ~~~~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~----  415 (451)
                      ...++|+..+.||+|+||.||+|.. .+++.|++|.+....  ......+.+|+.++++++||||+++.+++...+    
T Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~   83 (302)
T cd07864           4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD   83 (302)
T ss_pred             hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence            3456788899999999999999995 468899999996542  223356789999999999999999999887654    


Q ss_pred             ------eeeEEEeccCCCCHHHHHhccCCCCCCchhh
Q 013018          416 ------EKILVYEFVPNKSLDYFLYAQSPKNNNNWIG  446 (451)
Q Consensus       416 ------~~~lv~ey~~~GsL~~~L~~~~~~~~l~W~~  446 (451)
                            ..+|++||+++ +|.+++....  ..++|..
T Consensus        84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~~--~~~~~~~  117 (302)
T cd07864          84 FKKDKGAFYLVFEYMDH-DLMGLLESGL--VHFSEDH  117 (302)
T ss_pred             ccccCCcEEEEEcccCc-cHHHHHhcCC--CCCCHHH
Confidence                  68899999976 7878777542  2355544

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>PHA03211 serine/threonine kinase US3; Provisional

Probab=98.77  E-value=2.7e-08  Score=101.77  Aligned_cols=93  Identities=22%  Similarity=0.179  Sum_probs=76.8

Q ss_pred             cccccceecccCceeEEEEEc-CCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEeccC
Q 013018          347 NFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVP  425 (451)
Q Consensus       347 ~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~~  425 (451)
                      +|...+.||+|+||.||++.. ..++.|+||...      ...+.+|+.++++++|+||+++++++...+..+||+|++ 
T Consensus       170 gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~-  242 (461)
T PHA03211        170 GFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW------YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKY-  242 (461)
T ss_pred             CeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc------ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEcc-
Confidence            577888999999999999995 457889999542      234678999999999999999999999999999999999 


Q ss_pred             CCCHHHHHhccCCCCCCchhhhh
Q 013018          426 NKSLDYFLYAQSPKNNNNWIGQD  448 (451)
Q Consensus       426 ~GsL~~~L~~~~~~~~l~W~~r~  448 (451)
                      .|+|.+++....  ..++|.+.+
T Consensus       243 ~~~L~~~l~~~~--~~l~~~~~~  263 (461)
T PHA03211        243 RSDLYTYLGARL--RPLGLAQVT  263 (461)
T ss_pred             CCCHHHHHHhcC--CCCCHHHHH
Confidence            479999987533  247776654

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=98.76  E-value=1.5e-08  Score=95.48  Aligned_cols=100  Identities=22%  Similarity=0.272  Sum_probs=76.3

Q ss_pred             ccccceecccCceeEEEEEc-CCCcEEEEEEeccC-----ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEE
Q 013018          348 FSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRS-----SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  421 (451)
Q Consensus       348 ~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~-----~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~  421 (451)
                      |...++||+|+||.||++.. ..+..+++|.++..     ......++..|+.++.+++||||+++++.+...+..++++
T Consensus         2 y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   81 (260)
T cd08222           2 YILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCIIT   81 (260)
T ss_pred             ceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEEE
Confidence            56678999999999999984 33444555555421     2223346778999999999999999999998888999999


Q ss_pred             eccCCCCHHHHHhccC-CCCCCchhhh
Q 013018          422 EFVPNKSLDYFLYAQS-PKNNNNWIGQ  447 (451)
Q Consensus       422 ey~~~GsL~~~L~~~~-~~~~l~W~~r  447 (451)
                      ||+++++|.++++... ....++|.+.
T Consensus        82 e~~~~~~l~~~~~~~~~~~~~~~~~~~  108 (260)
T cd08222          82 EYCEGRDLDCKLEELKHTGKTLSENQV  108 (260)
T ss_pred             EeCCCCCHHHHHHHHhhcccccCHHHH
Confidence            9999999999997632 2345666543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=98.76  E-value=3.8e-08  Score=93.95  Aligned_cols=97  Identities=24%  Similarity=0.348  Sum_probs=78.2

Q ss_pred             ccccceecccCceeEEEEEc-CCCcEEEEEEeccCC--hhhHHHHHHHHHHHhcCCCCCcccceeEEEeC--ceeeEEEe
Q 013018          348 FSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSS--GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEG--EEKILVYE  422 (451)
Q Consensus       348 ~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~--~~~~lv~e  422 (451)
                      |+..+.||+|+||.||++.. .++..+++|.+....  ......+.+|+.++.+++|+|++++.+++...  +..++|+|
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e   80 (287)
T cd07840           1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE   80 (287)
T ss_pred             CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence            34568899999999999995 458899999997653  23346789999999999999999999999887  78999999


Q ss_pred             ccCCCCHHHHHhccCCCCCCchhhh
Q 013018          423 FVPNKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       423 y~~~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                      |+++ +|.+++....  ..++|.+.
T Consensus        81 ~~~~-~l~~~~~~~~--~~~~~~~~  102 (287)
T cd07840          81 YMDH-DLTGLLDSPE--VKFTESQI  102 (287)
T ss_pred             cccc-cHHHHHhccC--CCCCHHHH
Confidence            9974 8999987642  23455443

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=98.76  E-value=3.5e-08  Score=94.69  Aligned_cols=90  Identities=21%  Similarity=0.260  Sum_probs=75.7

Q ss_pred             ccccceecccCceeEEEEEc----CCCcEEEEEEeccCCh----hhHHHHHHHHHHHhcC-CCCCcccceeEEEeCceee
Q 013018          348 FSTDNKLGEGGFGEVYKGVL----PSGQEIAVKRLSRSSG----QGGQEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKI  418 (451)
Q Consensus       348 ~~~~~~lG~G~fg~V~~~~l----~~g~~vavK~l~~~~~----~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~  418 (451)
                      |+..+.||+|+||.||++..    .+|..+|+|.+.....    ...+.+.+|+.++.++ +|+||+++.+.+..+...+
T Consensus         2 y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~   81 (290)
T cd05613           2 FELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLH   81 (290)
T ss_pred             ceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeEE
Confidence            56678999999999999884    4688999999875321    2236788999999999 6999999999988888899


Q ss_pred             EEEeccCCCCHHHHHhccC
Q 013018          419 LVYEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       419 lv~ey~~~GsL~~~L~~~~  437 (451)
                      +|+||+++|+|.++|....
T Consensus        82 lv~e~~~~~~L~~~l~~~~  100 (290)
T cd05613          82 LILDYINGGELFTHLSQRE  100 (290)
T ss_pred             EEEecCCCCcHHHHHHHcC
Confidence            9999999999999998643

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=98.76  E-value=1.4e-08  Score=97.13  Aligned_cols=96  Identities=23%  Similarity=0.374  Sum_probs=77.4

Q ss_pred             ccccceecccCceeEEEEEc-CCCcEEEEEEeccCCh--hhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEecc
Q 013018          348 FSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSG--QGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFV  424 (451)
Q Consensus       348 ~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~  424 (451)
                      |+..+.||+|+||.||++.. .+|+.+++|.+.....  .....+.+|+.++++++|+||+++++........++++||+
T Consensus         2 y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   81 (284)
T cd07839           2 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEYC   81 (284)
T ss_pred             ceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEecC
Confidence            56678999999999999994 5789999999864322  22356889999999999999999999999889999999999


Q ss_pred             CCCCHHHHHhccCCCCCCchhh
Q 013018          425 PNKSLDYFLYAQSPKNNNNWIG  446 (451)
Q Consensus       425 ~~GsL~~~L~~~~~~~~l~W~~  446 (451)
                      + ++|.++++....  .++|..
T Consensus        82 ~-~~l~~~~~~~~~--~~~~~~  100 (284)
T cd07839          82 D-QDLKKYFDSCNG--DIDPEI  100 (284)
T ss_pred             C-CCHHHHHHhcCC--CCCHHH
Confidence            7 589888875432  245443

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=98.76  E-value=6.4e-08  Score=94.16  Aligned_cols=97  Identities=26%  Similarity=0.361  Sum_probs=77.9

Q ss_pred             ccccceecccCceeEEEEEc-CCCcEEEEEEeccCC---hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEec
Q 013018          348 FSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSS---GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  423 (451)
Q Consensus       348 ~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey  423 (451)
                      +...++||+|+||.||+|.. ..+..+++|.+....   ......+.+|+.++++++|||++++.+++...+..++|+||
T Consensus        23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  102 (313)
T cd06633          23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY  102 (313)
T ss_pred             hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence            45567899999999999984 468899999986432   23346788999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhccCCCCCCchhhh
Q 013018          424 VPNKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       424 ~~~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                      +. |+|.+++....  ..++|.+.
T Consensus       103 ~~-~~l~~~l~~~~--~~l~~~~~  123 (313)
T cd06633         103 CL-GSASDLLEVHK--KPLQEVEI  123 (313)
T ss_pred             CC-CCHHHHHHhcC--CCCCHHHH
Confidence            95 68888876533  23666554

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=98.75  E-value=2.5e-08  Score=96.58  Aligned_cols=90  Identities=36%  Similarity=0.694  Sum_probs=73.2

Q ss_pred             ccccccceecccCceeEEEEEc-CCCc----EEEEEEeccCCh-hhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeE
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVL-PSGQ----EIAVKRLSRSSG-QGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKIL  419 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l-~~g~----~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l  419 (451)
                      ++|+..+.||+|+||.||++.. .++.    .+++|.+..... ....++.+|+.++++++||||++++|.+... ...+
T Consensus         7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~   85 (303)
T cd05110           7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQL   85 (303)
T ss_pred             hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Ccee
Confidence            4567788999999999999984 3444    478888865432 3345789999999999999999999998754 4679


Q ss_pred             EEeccCCCCHHHHHhcc
Q 013018          420 VYEFVPNKSLDYFLYAQ  436 (451)
Q Consensus       420 v~ey~~~GsL~~~L~~~  436 (451)
                      ++||+++|+|.+++..+
T Consensus        86 v~e~~~~g~l~~~~~~~  102 (303)
T cd05110          86 VTQLMPHGCLLDYVHEH  102 (303)
T ss_pred             eehhcCCCCHHHHHHhc
Confidence            99999999999999864

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=98.74  E-value=2.8e-08  Score=94.83  Aligned_cols=98  Identities=23%  Similarity=0.319  Sum_probs=78.4

Q ss_pred             ccccceecccCceeEEEEEcC-CCcEEEEEEeccCCh-hhHHHHHHHHHHHhcCC-CCCcccceeEEEeCceeeEEEecc
Q 013018          348 FSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSRSSG-QGGQEFKNEVVLVAKLQ-HRNLVRLLGFCLEGEEKILVYEFV  424 (451)
Q Consensus       348 ~~~~~~lG~G~fg~V~~~~l~-~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~lv~ey~  424 (451)
                      |+..+.||+|++|.||+|... .++.|+||.+..... .......+|+..+.+++ |+|++++.+.+...+..++|+||+
T Consensus         1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~   80 (283)
T cd07830           1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM   80 (283)
T ss_pred             CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence            355788999999999999964 578899999865422 22234567999999999 999999999999999999999999


Q ss_pred             CCCCHHHHHhccCCCCCCchhhh
Q 013018          425 PNKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       425 ~~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                       +|+|.++++... ...++|.+.
T Consensus        81 -~~~l~~~~~~~~-~~~~~~~~~  101 (283)
T cd07830          81 -EGNLYQLMKDRK-GKPFSESVI  101 (283)
T ss_pred             -CCCHHHHHHhcc-cccCCHHHH
Confidence             889999998654 234566554

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=98.74  E-value=2.4e-08  Score=96.01  Aligned_cols=98  Identities=21%  Similarity=0.324  Sum_probs=78.3

Q ss_pred             ccccccceecccCceeEEEEEcC-CCcEEEEEEeccCChh--hHHHHHHHHHHHhcCCCCCcccceeEEEeC--ceeeEE
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSRSSGQ--GGQEFKNEVVLVAKLQHRNLVRLLGFCLEG--EEKILV  420 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l~-~g~~vavK~l~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~g~~~~~--~~~~lv  420 (451)
                      ++|+..+.||+|+||.||++... +++.+++|.++.....  ....+.+|+.++.+++||||+++.+++...  ...+||
T Consensus         5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv   84 (293)
T cd07843           5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV   84 (293)
T ss_pred             hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence            45777899999999999999954 5889999999744221  234678899999999999999999998877  789999


Q ss_pred             EeccCCCCHHHHHhccCCCCCCchhh
Q 013018          421 YEFVPNKSLDYFLYAQSPKNNNNWIG  446 (451)
Q Consensus       421 ~ey~~~GsL~~~L~~~~~~~~l~W~~  446 (451)
                      +||++ ++|.+++.....  .++|.+
T Consensus        85 ~e~~~-~~L~~~~~~~~~--~l~~~~  107 (293)
T cd07843          85 MEYVE-HDLKSLMETMKQ--PFLQSE  107 (293)
T ss_pred             ehhcC-cCHHHHHHhccC--CCCHHH
Confidence            99997 599999876432  355544

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=98.74  E-value=5.2e-08  Score=92.45  Aligned_cols=89  Identities=30%  Similarity=0.507  Sum_probs=71.8

Q ss_pred             ccccceecccCceeEEEEEcC----CCcEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCc------
Q 013018          348 FSTDNKLGEGGFGEVYKGVLP----SGQEIAVKRLSRS--SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGE------  415 (451)
Q Consensus       348 ~~~~~~lG~G~fg~V~~~~l~----~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~------  415 (451)
                      |...++||+|+||.||++.+.    .+..++||.+...  .....+++.+|+.++++++||||+++++.+...+      
T Consensus         1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   80 (273)
T cd05074           1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP   80 (273)
T ss_pred             CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence            345678999999999999853    3678999998654  2334567999999999999999999999876532      


Q ss_pred             eeeEEEeccCCCCHHHHHhcc
Q 013018          416 EKILVYEFVPNKSLDYFLYAQ  436 (451)
Q Consensus       416 ~~~lv~ey~~~GsL~~~L~~~  436 (451)
                      ..++++||+++|+|.+++...
T Consensus        81 ~~~~~~~~~~~~~l~~~~~~~  101 (273)
T cd05074          81 IPMVILPFMKHGDLHTFLLMS  101 (273)
T ss_pred             ceEEEEecCCCCcHHHHHHHh
Confidence            246899999999999998643

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=98.73  E-value=6.2e-08  Score=92.93  Aligned_cols=99  Identities=26%  Similarity=0.404  Sum_probs=73.0

Q ss_pred             cccccceecccCceeEEEEEc--CCCcEEEEEEeccCCh--hhHHHHHHHHHHHhcC---CCCCcccceeEEEe-----C
Q 013018          347 NFSTDNKLGEGGFGEVYKGVL--PSGQEIAVKRLSRSSG--QGGQEFKNEVVLVAKL---QHRNLVRLLGFCLE-----G  414 (451)
Q Consensus       347 ~~~~~~~lG~G~fg~V~~~~l--~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l---~h~niv~l~g~~~~-----~  414 (451)
                      +|...+.||+|+||.||++..  .++..||+|.+.....  .....+.+|+.++..+   +||||+++++++..     .
T Consensus         2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~   81 (290)
T cd07862           2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE   81 (290)
T ss_pred             CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCC
Confidence            567789999999999999984  3468899999864322  2234567777777665   69999999998853     3


Q ss_pred             ceeeEEEeccCCCCHHHHHhccCCCCCCchhhh
Q 013018          415 EEKILVYEFVPNKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       415 ~~~~lv~ey~~~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                      ...++|+||++ |+|.+++..... ..++|.+.
T Consensus        82 ~~~~lv~e~~~-~~l~~~~~~~~~-~~~~~~~~  112 (290)
T cd07862          82 TKLTLVFEHVD-QDLTTYLDKVPE-PGVPTETI  112 (290)
T ss_pred             CcEEEEEccCC-CCHHHHHHhCCC-CCCCHHHH
Confidence            46889999996 699999986432 23555443

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=98.73  E-value=5.4e-08  Score=94.41  Aligned_cols=89  Identities=25%  Similarity=0.451  Sum_probs=73.6

Q ss_pred             ccccceecccCceeEEEEEcC---CCcEEEEEEeccCC---hhhHHHHHHHHHHHhcCCCCCcccceeEEEeC--ceeeE
Q 013018          348 FSTDNKLGEGGFGEVYKGVLP---SGQEIAVKRLSRSS---GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEG--EEKIL  419 (451)
Q Consensus       348 ~~~~~~lG~G~fg~V~~~~l~---~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~--~~~~l  419 (451)
                      |...++||+|+||.||++...   .+..+|+|.+....   ....+.+.+|+.++.+++||||+++++++...  ...++
T Consensus         2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   81 (316)
T cd07842           2 YEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVYL   81 (316)
T ss_pred             ceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEEE
Confidence            566788999999999999953   57899999997632   23346788999999999999999999999887  78999


Q ss_pred             EEeccCCCCHHHHHhccC
Q 013018          420 VYEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       420 v~ey~~~GsL~~~L~~~~  437 (451)
                      |+||+++ +|.+++....
T Consensus        82 v~e~~~~-~l~~~~~~~~   98 (316)
T cd07842          82 LFDYAEH-DLWQIIKFHR   98 (316)
T ss_pred             EEeCCCc-CHHHHHHhhc
Confidence            9999975 7877776543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=98.73  E-value=5.3e-08  Score=92.79  Aligned_cols=98  Identities=21%  Similarity=0.299  Sum_probs=76.3

Q ss_pred             ccccceecccCceeEEEEE-cCCCcEEEEEEeccCC-hhhHHHHHHHHHHHhcCC-CCCcccceeEEEeC--ceeeEEEe
Q 013018          348 FSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSS-GQGGQEFKNEVVLVAKLQ-HRNLVRLLGFCLEG--EEKILVYE  422 (451)
Q Consensus       348 ~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~--~~~~lv~e  422 (451)
                      |+..++||+|+||.||++. ..++..+++|.+.... ........+|+..+.++. |+|++++++++...  +..++|+|
T Consensus         1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e   80 (282)
T cd07831           1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE   80 (282)
T ss_pred             CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence            3456889999999999999 4568899999986542 222234568999999985 99999999999877  78999999


Q ss_pred             ccCCCCHHHHHhccCCCCCCchhhhh
Q 013018          423 FVPNKSLDYFLYAQSPKNNNNWIGQD  448 (451)
Q Consensus       423 y~~~GsL~~~L~~~~~~~~l~W~~r~  448 (451)
                      |++ |+|.+++....  ..++|.+..
T Consensus        81 ~~~-~~l~~~l~~~~--~~~~~~~~~  103 (282)
T cd07831          81 LMD-MNLYELIKGRK--RPLPEKRVK  103 (282)
T ss_pred             cCC-ccHHHHHHhcc--CCCCHHHHH
Confidence            996 68988887643  346665543

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>PRK09188 serine/threonine protein kinase; Provisional

Probab=98.73  E-value=4.1e-08  Score=96.63  Aligned_cols=86  Identities=17%  Similarity=0.163  Sum_probs=67.1

Q ss_pred             HhhccccccceecccCceeEEEEEcC--CCcEEEEEEeccC-----ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCc
Q 013018          343 VATNNFSTDNKLGEGGFGEVYKGVLP--SGQEIAVKRLSRS-----SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGE  415 (451)
Q Consensus       343 ~~~~~~~~~~~lG~G~fg~V~~~~l~--~g~~vavK~l~~~-----~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~  415 (451)
                      ...++|...++||+|+||.||++...  +++.+|||++...     .....+.|.+|+++|.+++|+|+++.+..   .+
T Consensus        15 ~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~---~~   91 (365)
T PRK09188         15 ALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA---TG   91 (365)
T ss_pred             cccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE---cC
Confidence            34567888999999999999999853  5777899987533     12234679999999999999999863322   24


Q ss_pred             eeeEEEeccCCCCHHH
Q 013018          416 EKILVYEFVPNKSLDY  431 (451)
Q Consensus       416 ~~~lv~ey~~~GsL~~  431 (451)
                      ..+|||||+++++|..
T Consensus        92 ~~~LVmE~~~G~~L~~  107 (365)
T PRK09188         92 KDGLVRGWTEGVPLHL  107 (365)
T ss_pred             CcEEEEEccCCCCHHH
Confidence            5799999999999963

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=98.72  E-value=3.9e-08  Score=94.56  Aligned_cols=91  Identities=25%  Similarity=0.418  Sum_probs=76.3

Q ss_pred             ccccccceecccCceeEEEEEc-CCCcEEEEEEeccCCh--hhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEe
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSG--QGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  422 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  422 (451)
                      ++|+..+.||+|.+|.||++.. .+++.+++|.+.....  .....+.+|+.++++++|+||+++++++......++|+|
T Consensus         2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   81 (294)
T PLN00009          2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE   81 (294)
T ss_pred             CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence            4577889999999999999995 4688999998864322  233678899999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhccC
Q 013018          423 FVPNKSLDYFLYAQS  437 (451)
Q Consensus       423 y~~~GsL~~~L~~~~  437 (451)
                      |++ ++|.+++....
T Consensus        82 ~~~-~~l~~~~~~~~   95 (294)
T PLN00009         82 YLD-LDLKKHMDSSP   95 (294)
T ss_pred             ccc-ccHHHHHHhCC
Confidence            996 58888886533

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=98.71  E-value=9e-08  Score=87.59  Aligned_cols=89  Identities=34%  Similarity=0.521  Sum_probs=78.4

Q ss_pred             cccceecccCceeEEEEEcCC-CcEEEEEEeccCChh-hHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEeccCC
Q 013018          349 STDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSRSSGQ-GGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPN  426 (451)
Q Consensus       349 ~~~~~lG~G~fg~V~~~~l~~-g~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~~~  426 (451)
                      ...+.||+|++|.||++.... ++.+++|.+...... ..+.+.+|+..+.+++|+|++++++.+......++++||+++
T Consensus         2 ~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~   81 (225)
T smart00221        2 ELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCEG   81 (225)
T ss_pred             ceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccCC
Confidence            456889999999999999654 889999999866444 567899999999999999999999999888899999999999


Q ss_pred             CCHHHHHhccC
Q 013018          427 KSLDYFLYAQS  437 (451)
Q Consensus       427 GsL~~~L~~~~  437 (451)
                      ++|.+++....
T Consensus        82 ~~L~~~~~~~~   92 (225)
T smart00221       82 GDLFDYLRKKG   92 (225)
T ss_pred             CCHHHHHHhcc
Confidence            99999998654

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=98.71  E-value=3.9e-08  Score=96.38  Aligned_cols=94  Identities=23%  Similarity=0.368  Sum_probs=77.4

Q ss_pred             HHHhhccccccceecccCceeEEEEE-cCCCcEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCcccceeEEEe-Cce
Q 013018          341 IEVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRS--SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLE-GEE  416 (451)
Q Consensus       341 l~~~~~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~  416 (451)
                      +...+++|+..+.||+|+||.||++. ..++..+++|++...  .....+.+.+|+.++.+++||||+++.+++.. ...
T Consensus         5 ~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~   84 (328)
T cd07856           5 VFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLED   84 (328)
T ss_pred             eeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCc
Confidence            34466788999999999999999998 557899999988643  22234678899999999999999999998865 457


Q ss_pred             eeEEEeccCCCCHHHHHhc
Q 013018          417 KILVYEFVPNKSLDYFLYA  435 (451)
Q Consensus       417 ~~lv~ey~~~GsL~~~L~~  435 (451)
                      .++++||+ +++|.++++.
T Consensus        85 ~~lv~e~~-~~~L~~~~~~  102 (328)
T cd07856          85 IYFVTELL-GTDLHRLLTS  102 (328)
T ss_pred             EEEEeehh-ccCHHHHHhc
Confidence            88999998 5689988875

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=98.71  E-value=6.7e-08  Score=93.73  Aligned_cols=100  Identities=24%  Similarity=0.348  Sum_probs=78.4

Q ss_pred             hccccccceecccCceeEEEEEc-CCCcEEEEEEeccCChh--hHHHHHHHHHHHhcCCCCCcccceeEEEeC--ceeeE
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSGQ--GGQEFKNEVVLVAKLQHRNLVRLLGFCLEG--EEKIL  419 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~g~~~~~--~~~~l  419 (451)
                      .++|+..+.||+|+||.||++.. .+|+.||+|.+......  ....+.+|+.++.+++|+|++++.+++...  +..++
T Consensus         6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   85 (309)
T cd07845           6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL   85 (309)
T ss_pred             ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence            45688889999999999999995 56899999998644221  224567899999999999999999998754  46899


Q ss_pred             EEeccCCCCHHHHHhccCCCCCCchhhh
Q 013018          420 VYEFVPNKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       420 v~ey~~~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                      |+||++ ++|.+++....  ..++|.+.
T Consensus        86 v~e~~~-~~l~~~l~~~~--~~l~~~~~  110 (309)
T cd07845          86 VMEYCE-QDLASLLDNMP--TPFSESQV  110 (309)
T ss_pred             EEecCC-CCHHHHHHhcc--cCCCHHHH
Confidence            999996 48998887643  33556543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=98.70  E-value=4.7e-09  Score=94.39  Aligned_cols=96  Identities=24%  Similarity=0.259  Sum_probs=84.5

Q ss_pred             HHhhccccccceecccCceeEEEEE-cCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeC-----c
Q 013018          342 EVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEG-----E  415 (451)
Q Consensus       342 ~~~~~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-----~  415 (451)
                      .+..++|...+.||+|+|..||.++ +.++...|+|++...+.++.+..++|++..++++||||++++..+...     .
T Consensus        17 ~In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~   96 (302)
T KOG2345|consen   17 IINNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKH   96 (302)
T ss_pred             EEcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCce
Confidence            3455678889999999999999999 888999999999888777888999999999999999999999887543     3


Q ss_pred             eeeEEEeccCCCCHHHHHhccC
Q 013018          416 EKILVYEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       416 ~~~lv~ey~~~GsL~~~L~~~~  437 (451)
                      ..||++.|...|+|.+.+....
T Consensus        97 ~~yll~Pyy~~Gsl~d~i~~~k  118 (302)
T KOG2345|consen   97 EAYLLLPYYKRGSLLDEIERLK  118 (302)
T ss_pred             eEEEEeehhccccHHHHHHHHh
Confidence            5899999999999999998754

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=98.69  E-value=6.3e-08  Score=94.83  Aligned_cols=86  Identities=21%  Similarity=0.291  Sum_probs=72.9

Q ss_pred             ceeccc--CceeEEEEE-cCCCcEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEeccCC
Q 013018          352 NKLGEG--GFGEVYKGV-LPSGQEIAVKRLSRS--SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPN  426 (451)
Q Consensus       352 ~~lG~G--~fg~V~~~~-l~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~~~  426 (451)
                      ..||+|  +||.||++. ...|+.||+|.+...  .....+.+.+|+.+++.++||||+++++++..++..++|+||+++
T Consensus         4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~   83 (328)
T cd08226           4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY   83 (328)
T ss_pred             HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence            456666  899999998 457899999998643  223346789999999999999999999999999999999999999


Q ss_pred             CCHHHHHhccC
Q 013018          427 KSLDYFLYAQS  437 (451)
Q Consensus       427 GsL~~~L~~~~  437 (451)
                      |+|.++++...
T Consensus        84 ~~l~~~l~~~~   94 (328)
T cd08226          84 GSANSLLKTYF   94 (328)
T ss_pred             CCHHHHHHhhc
Confidence            99999998643

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.69  E-value=1.9e-08  Score=98.86  Aligned_cols=92  Identities=22%  Similarity=0.303  Sum_probs=78.9

Q ss_pred             ccccceecccCceeEEEEE-cCCCcEEEEEEeccCChh--hHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEecc
Q 013018          348 FSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQ--GGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFV  424 (451)
Q Consensus       348 ~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~  424 (451)
                      |...+.||+|-|..|-.++ .=.|+.||||++.+..-.  ....+..|++.|+-++|||||+|+.+...+..+|||+|.=
T Consensus        20 YDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLELG   99 (864)
T KOG4717|consen   20 YDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILELG   99 (864)
T ss_pred             ehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEec
Confidence            5567889999999988777 338999999999865332  2367899999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhccCCC
Q 013018          425 PNKSLDYFLYAQSPK  439 (451)
Q Consensus       425 ~~GsL~~~L~~~~~~  439 (451)
                      .+|+|.+||-.+..+
T Consensus       100 D~GDl~DyImKHe~G  114 (864)
T KOG4717|consen  100 DGGDLFDYIMKHEEG  114 (864)
T ss_pred             CCchHHHHHHhhhcc
Confidence            999999999876543

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=98.68  E-value=6.4e-08  Score=93.94  Aligned_cols=89  Identities=30%  Similarity=0.417  Sum_probs=74.2

Q ss_pred             cccccceecccCceeEEEEEc-CCCcEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEe
Q 013018          347 NFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRS---SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  422 (451)
Q Consensus       347 ~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  422 (451)
                      .|+..+.||+|+||.||+|.. .++..+++|.+...   ......++.+|+.++++++|+|++++.+++......++|+|
T Consensus        16 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   95 (308)
T cd06634          16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME   95 (308)
T ss_pred             HHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEE
Confidence            356678899999999999994 46788999988642   22334678899999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhcc
Q 013018          423 FVPNKSLDYFLYAQ  436 (451)
Q Consensus       423 y~~~GsL~~~L~~~  436 (451)
                      |+. |+|.+++...
T Consensus        96 ~~~-~~l~~~~~~~  108 (308)
T cd06634          96 YCL-GSASDLLEVH  108 (308)
T ss_pred             ccC-CCHHHHHHHc
Confidence            996 6888887643

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=98.68  E-value=5.4e-08  Score=95.67  Aligned_cols=98  Identities=22%  Similarity=0.408  Sum_probs=77.8

Q ss_pred             hccccccceecccCceeEEEEEc-CCCcEEEEEEeccC--ChhhHHHHHHHHHHHhcC-CCCCcccceeEEEeC--ceee
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRS--SGQGGQEFKNEVVLVAKL-QHRNLVRLLGFCLEG--EEKI  418 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~--~~~~  418 (451)
                      .++|+..+.||+|+||.||+|.. .+++.+++|++...  .......+.+|+.++.++ +|+||+++++++...  ...+
T Consensus         6 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~   85 (337)
T cd07852           6 LRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIY   85 (337)
T ss_pred             hhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEE
Confidence            35677789999999999999995 46889999988542  223345688999999999 999999999988653  3679


Q ss_pred             EEEeccCCCCHHHHHhccCCCCCCchhhh
Q 013018          419 LVYEFVPNKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       419 lv~ey~~~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                      +|+||++ ++|.++++..    .++|..+
T Consensus        86 lv~e~~~-~~L~~~~~~~----~~~~~~~  109 (337)
T cd07852          86 LVFEYME-TDLHAVIRAN----ILEDVHK  109 (337)
T ss_pred             EEecccc-cCHHHHHhcC----CCCHHHH
Confidence            9999997 5999998763    4566554

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>PHA03209 serine/threonine kinase US3; Provisional

Probab=98.67  E-value=5.5e-08  Score=96.52  Aligned_cols=96  Identities=16%  Similarity=0.175  Sum_probs=77.4

Q ss_pred             hhccccccceecccCceeEEEEEc-CCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEe
Q 013018          344 ATNNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  422 (451)
Q Consensus       344 ~~~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  422 (451)
                      ...+|...+.||+|+||.||++.. ..+..||+|.....      ....|+.++++++|+||+++++++......++|+|
T Consensus        64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  137 (357)
T PHA03209         64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLP  137 (357)
T ss_pred             hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEE
Confidence            345789999999999999999995 45678999975432      33568999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhccCCCCCCchhhhh
Q 013018          423 FVPNKSLDYFLYAQSPKNNNNWIGQD  448 (451)
Q Consensus       423 y~~~GsL~~~L~~~~~~~~l~W~~r~  448 (451)
                      |+ .|+|.+++....  ..++|.++.
T Consensus       138 ~~-~~~l~~~l~~~~--~~~~~~~~~  160 (357)
T PHA03209        138 HY-SSDLYTYLTKRS--RPLPIDQAL  160 (357)
T ss_pred             cc-CCcHHHHHHhcc--CCCCHHHHH
Confidence            99 579999987533  236665543

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=98.67  E-value=2.2e-08  Score=99.18  Aligned_cols=93  Identities=25%  Similarity=0.344  Sum_probs=78.8

Q ss_pred             hccccccceecccCceeEEEEE-cCCCcEEEEEEeccC---ChhhHHHHHHHHHHHhcC-CCCCcccceeEEEeCceeeE
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRS---SGQGGQEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKIL  419 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~l  419 (451)
                      ..+|...+.||+|+|++|++++ ...+.++|||++.+.   ..+...-..+|-.+|.+| .||.|++|+--+.+...+|.
T Consensus        72 ~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYF  151 (604)
T KOG0592|consen   72 PNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYF  151 (604)
T ss_pred             hhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEE
Confidence            4567889999999999999999 667899999999654   122234466788889999 89999999988888999999


Q ss_pred             EEeccCCCCHHHHHhccC
Q 013018          420 VYEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       420 v~ey~~~GsL~~~L~~~~  437 (451)
                      |+||.++|+|.++|+..+
T Consensus       152 vLe~A~nGdll~~i~K~G  169 (604)
T KOG0592|consen  152 VLEYAPNGDLLDLIKKYG  169 (604)
T ss_pred             EEEecCCCcHHHHHHHhC
Confidence            999999999999999754

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=98.66  E-value=7.9e-08  Score=92.11  Aligned_cols=89  Identities=21%  Similarity=0.302  Sum_probs=74.5

Q ss_pred             ccccceecccCceeEEEEEc----CCCcEEEEEEeccCC----hhhHHHHHHHHHHHhcC-CCCCcccceeEEEeCceee
Q 013018          348 FSTDNKLGEGGFGEVYKGVL----PSGQEIAVKRLSRSS----GQGGQEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKI  418 (451)
Q Consensus       348 ~~~~~~lG~G~fg~V~~~~l----~~g~~vavK~l~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~  418 (451)
                      |+..+.||+|+||.||++..    .+++.++||.+....    ....+.+.+|+.++.++ +||||+++.+....+...+
T Consensus         2 ~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~   81 (288)
T cd05583           2 FELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLH   81 (288)
T ss_pred             ceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEE
Confidence            56678999999999999873    356889999986432    12235688999999999 6999999999988888899


Q ss_pred             EEEeccCCCCHHHHHhcc
Q 013018          419 LVYEFVPNKSLDYFLYAQ  436 (451)
Q Consensus       419 lv~ey~~~GsL~~~L~~~  436 (451)
                      +|+||+++|+|.+++...
T Consensus        82 lv~e~~~~~~L~~~~~~~   99 (288)
T cd05583          82 LILDYVNGGELFTHLYQR   99 (288)
T ss_pred             EEEecCCCCcHHHHHhhc
Confidence            999999999999999854

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=98.66  E-value=8.1e-08  Score=89.73  Aligned_cols=84  Identities=25%  Similarity=0.310  Sum_probs=72.8

Q ss_pred             ecccCceeEEEEEcC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEeccCCCCH
Q 013018          354 LGEGGFGEVYKGVLP-SGQEIAVKRLSRSSG---QGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSL  429 (451)
Q Consensus       354 lG~G~fg~V~~~~l~-~g~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~~~GsL  429 (451)
                      ||+|+||.||++... +++.+++|.+.....   .....+.+|+.++++++|+||+++++.+..+...++++||+++++|
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L   80 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL   80 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence            689999999999953 588999999875432   2346799999999999999999999999888999999999999999


Q ss_pred             HHHHhccC
Q 013018          430 DYFLYAQS  437 (451)
Q Consensus       430 ~~~L~~~~  437 (451)
                      .+++....
T Consensus        81 ~~~l~~~~   88 (250)
T cd05123          81 FSHLSKEG   88 (250)
T ss_pred             HHHHHhcC
Confidence            99998653

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=98.65  E-value=1.1e-07  Score=89.53  Aligned_cols=86  Identities=19%  Similarity=0.251  Sum_probs=68.2

Q ss_pred             ceecccCceeEEEEEc-CCCcEEEEEEeccCCh---hhHHHHHHHHHHH-hcCCCCCcccceeEEEeCceeeEEEeccCC
Q 013018          352 NKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSG---QGGQEFKNEVVLV-AKLQHRNLVRLLGFCLEGEEKILVYEFVPN  426 (451)
Q Consensus       352 ~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~~---~~~~~~~~E~~~l-~~l~h~niv~l~g~~~~~~~~~lv~ey~~~  426 (451)
                      +.||+|+||.||++.. .+++.+|+|.+.....   .....+..|..++ ...+|+|++++++.+...+..++++||+++
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   81 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG   81 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence            5689999999999984 5688999999865421   2223445555544 445899999999999998999999999999


Q ss_pred             CCHHHHHhccC
Q 013018          427 KSLDYFLYAQS  437 (451)
Q Consensus       427 GsL~~~L~~~~  437 (451)
                      |+|.++++...
T Consensus        82 ~~L~~~l~~~~   92 (260)
T cd05611          82 GDCASLIKTLG   92 (260)
T ss_pred             CCHHHHHHHcC
Confidence            99999998643

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=98.65  E-value=9.7e-08  Score=93.62  Aligned_cols=84  Identities=20%  Similarity=0.254  Sum_probs=67.9

Q ss_pred             ecccCceeEEEEE-cCCCcEEEEEEeccCC---hhhHHHHHHHHHHHhcC---CCCCcccceeEEEeCceeeEEEeccCC
Q 013018          354 LGEGGFGEVYKGV-LPSGQEIAVKRLSRSS---GQGGQEFKNEVVLVAKL---QHRNLVRLLGFCLEGEEKILVYEFVPN  426 (451)
Q Consensus       354 lG~G~fg~V~~~~-l~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l---~h~niv~l~g~~~~~~~~~lv~ey~~~  426 (451)
                      ||+|+||.||++. ..+++.+|||.+....   ......+..|..++.+.   +||||+++.+.+......++||||+++
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~   80 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG   80 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence            6999999999998 4568999999986432   12234456677776655   699999999999999999999999999


Q ss_pred             CCHHHHHhccC
Q 013018          427 KSLDYFLYAQS  437 (451)
Q Consensus       427 GsL~~~L~~~~  437 (451)
                      |+|.+++....
T Consensus        81 g~L~~~l~~~~   91 (330)
T cd05586          81 GELFWHLQKEG   91 (330)
T ss_pred             ChHHHHHHhcC
Confidence            99999987643

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=98.64  E-value=9.1e-08  Score=93.96  Aligned_cols=86  Identities=22%  Similarity=0.366  Sum_probs=71.4

Q ss_pred             ccceecccCceeEEEEE-cCCCcEEEEEEeccCChhh--------------HHHHHHHHHHHhcCCCCCcccceeEEEeC
Q 013018          350 TDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQG--------------GQEFKNEVVLVAKLQHRNLVRLLGFCLEG  414 (451)
Q Consensus       350 ~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~~~--------------~~~~~~E~~~l~~l~h~niv~l~g~~~~~  414 (451)
                      ..+.||+|+||.||++. ...++.||||.+.......              ...+.+|+.++.+++|+||+++++++...
T Consensus        13 ~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~   92 (335)
T PTZ00024         13 KGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVYVEG   92 (335)
T ss_pred             hhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEEEecC
Confidence            35679999999999999 4468999999886432111              12578999999999999999999999999


Q ss_pred             ceeeEEEeccCCCCHHHHHhcc
Q 013018          415 EEKILVYEFVPNKSLDYFLYAQ  436 (451)
Q Consensus       415 ~~~~lv~ey~~~GsL~~~L~~~  436 (451)
                      +..++++||++ |+|.+++...
T Consensus        93 ~~~~lv~e~~~-~~l~~~l~~~  113 (335)
T PTZ00024         93 DFINLVMDIMA-SDLKKVVDRK  113 (335)
T ss_pred             CcEEEEEeccc-cCHHHHHHhc
Confidence            99999999996 6999998753

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=98.64  E-value=1.2e-07  Score=94.26  Aligned_cols=90  Identities=24%  Similarity=0.363  Sum_probs=72.7

Q ss_pred             hccccccceecccCceeEEEEE-cCCCcEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCc------
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRS--SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGE------  415 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~------  415 (451)
                      .++|...+.||+|+||.||++. ...|..+|||.+...  .......+.+|+.++..++||||+++++++...+      
T Consensus        20 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~   99 (359)
T cd07876          20 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQ   99 (359)
T ss_pred             hhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccc
Confidence            4678889999999999999998 456899999998643  2233467889999999999999999999876433      


Q ss_pred             eeeEEEeccCCCCHHHHHhc
Q 013018          416 EKILVYEFVPNKSLDYFLYA  435 (451)
Q Consensus       416 ~~~lv~ey~~~GsL~~~L~~  435 (451)
                      ..++|+||+++ +|.++++.
T Consensus       100 ~~~lv~e~~~~-~l~~~~~~  118 (359)
T cd07876         100 DVYLVMELMDA-NLCQVIHM  118 (359)
T ss_pred             eeEEEEeCCCc-CHHHHHhc
Confidence            47899999965 67766653

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>PTZ00036 glycogen synthase kinase; Provisional

Probab=98.64  E-value=1.1e-07  Score=97.11  Aligned_cols=87  Identities=22%  Similarity=0.479  Sum_probs=69.1

Q ss_pred             hhccccccceecccCceeEEEEEc-CCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeC--------
Q 013018          344 ATNNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEG--------  414 (451)
Q Consensus       344 ~~~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~--------  414 (451)
                      ...+|...++||+|+||.||+|.. ..++.||||++....    ....+|+.+|++++||||+++.+++...        
T Consensus        64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~  139 (440)
T PTZ00036         64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKN  139 (440)
T ss_pred             cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCc
Confidence            345688899999999999999994 568899999885432    2345799999999999999998876432        


Q ss_pred             ceeeEEEeccCCCCHHHHHhc
Q 013018          415 EEKILVYEFVPNKSLDYFLYA  435 (451)
Q Consensus       415 ~~~~lv~ey~~~GsL~~~L~~  435 (451)
                      ..+++||||+++ +|.+++..
T Consensus       140 ~~l~lvmE~~~~-~l~~~~~~  159 (440)
T PTZ00036        140 IFLNVVMEFIPQ-TVHKYMKH  159 (440)
T ss_pred             eEEEEEEecCCc-cHHHHHHH
Confidence            136699999974 78887764

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=98.63  E-value=3.3e-08  Score=94.30  Aligned_cols=98  Identities=26%  Similarity=0.380  Sum_probs=81.1

Q ss_pred             HHHHHhhccccccceecccCceeEEEEEcC------CCcEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCcccceeEE
Q 013018          339 ETIEVATNNFSTDNKLGEGGFGEVYKGVLP------SGQEIAVKRLSRS-SGQGGQEFKNEVVLVAKLQHRNLVRLLGFC  411 (451)
Q Consensus       339 ~~l~~~~~~~~~~~~lG~G~fg~V~~~~l~------~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~  411 (451)
                      +++....+++.....+.+|.||+||+|.|.      +.+.|-||.++.. +.-+...|+.|...+..+.|||+++..|++
T Consensus       277 ~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~  356 (563)
T KOG1024|consen  277 QELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVS  356 (563)
T ss_pred             HhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEE
Confidence            456666777888889999999999999753      3456788888755 444567899999999999999999999999


Q ss_pred             EeC-ceeeEEEeccCCCCHHHHHhcc
Q 013018          412 LEG-EEKILVYEFVPNKSLDYFLYAQ  436 (451)
Q Consensus       412 ~~~-~~~~lv~ey~~~GsL~~~L~~~  436 (451)
                      ... +..+++|.++.-|+|..||..-
T Consensus       357 ie~~~~P~V~y~~~~~gNLK~FL~~C  382 (563)
T KOG1024|consen  357 IEDYATPFVLYPATGVGNLKSFLQIC  382 (563)
T ss_pred             eeccCcceEEEeccCcchHHHHHHHh
Confidence            874 4678999999999999999943

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=98.63  E-value=1.1e-07  Score=91.99  Aligned_cols=90  Identities=27%  Similarity=0.423  Sum_probs=72.4

Q ss_pred             ccccccceecccCceeEEEEEc-CCCcEEEEEEeccCC--hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCc-------
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSS--GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGE-------  415 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~-------  415 (451)
                      ++|+..++||+|+||.||++.. .+++.+|||.+....  ......+.+|+.++++++||||+++++++...+       
T Consensus        12 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   91 (310)
T cd07865          12 SKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYK   91 (310)
T ss_pred             hheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCC
Confidence            4578889999999999999994 568999999886432  222345678999999999999999999987654       


Q ss_pred             -eeeEEEeccCCCCHHHHHhcc
Q 013018          416 -EKILVYEFVPNKSLDYFLYAQ  436 (451)
Q Consensus       416 -~~~lv~ey~~~GsL~~~L~~~  436 (451)
                       ..++|+||++ ++|.+++...
T Consensus        92 ~~~~lv~e~~~-~~l~~~l~~~  112 (310)
T cd07865          92 GSFYLVFEFCE-HDLAGLLSNK  112 (310)
T ss_pred             ceEEEEEcCCC-cCHHHHHHhc
Confidence             3489999996 4888888753

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=98.63  E-value=7e-08  Score=91.90  Aligned_cols=96  Identities=26%  Similarity=0.349  Sum_probs=78.6

Q ss_pred             cccceecccCceeEEEEEc-CCCcEEEEEEeccCC--hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEeccC
Q 013018          349 STDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSS--GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVP  425 (451)
Q Consensus       349 ~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~~  425 (451)
                      +..+.||+|.+|.||++.. .+++.+++|.+....  ....+.+.+|+.++++++|+|++++.+++...+..++|+||++
T Consensus         2 ~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   81 (282)
T cd07829           2 EKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYCD   81 (282)
T ss_pred             eeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCcC
Confidence            4567899999999999995 458999999997653  2234678899999999999999999999998899999999998


Q ss_pred             CCCHHHHHhccCCCCCCchhhh
Q 013018          426 NKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       426 ~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                       ++|.+++....  ..+++.++
T Consensus        82 -~~l~~~i~~~~--~~~~~~~~  100 (282)
T cd07829          82 -MDLKKYLDKRP--GPLSPNLI  100 (282)
T ss_pred             -cCHHHHHHhhc--cCCCHHHH
Confidence             59999998753  23555544

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>PHA03207 serine/threonine kinase US3; Provisional

Probab=98.63  E-value=9.8e-08  Score=96.02  Aligned_cols=95  Identities=14%  Similarity=0.123  Sum_probs=75.9

Q ss_pred             hccccccceecccCceeEEEEEcC---CCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEE
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGVLP---SGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  421 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~l~---~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~  421 (451)
                      ..+|...+.||+|+||.||++...   .+..|++|.+...     ....+|+.++++++||||+++++.+......++++
T Consensus        91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~  165 (392)
T PHA03207         91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVM  165 (392)
T ss_pred             cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEe
Confidence            346888999999999999999742   3578999988643     24568999999999999999999998888999999


Q ss_pred             eccCCCCHHHHHhccCCCCCCchhhhh
Q 013018          422 EFVPNKSLDYFLYAQSPKNNNNWIGQD  448 (451)
Q Consensus       422 ey~~~GsL~~~L~~~~~~~~l~W~~r~  448 (451)
                      |++. ++|.+++...   ..++|.+.+
T Consensus       166 e~~~-~~l~~~l~~~---~~l~~~~~~  188 (392)
T PHA03207        166 PKYK-CDLFTYVDRS---GPLPLEQAI  188 (392)
T ss_pred             hhcC-CCHHHHHHhc---CCCCHHHHH
Confidence            9985 6899998532   235555443

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=98.63  E-value=8.1e-08  Score=94.02  Aligned_cols=96  Identities=20%  Similarity=0.308  Sum_probs=78.3

Q ss_pred             cccccceecccCceeEEEEEc-CCCcEEEEEEeccCC--hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCc-----eee
Q 013018          347 NFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSS--GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGE-----EKI  418 (451)
Q Consensus       347 ~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~-----~~~  418 (451)
                      +|...+.||+|+||.||++.. ..+..+++|.+....  ....+.+.+|+.+++.++|+||+++.+++...+     ..+
T Consensus         1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~   80 (330)
T cd07834           1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY   80 (330)
T ss_pred             CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence            356778999999999999995 458899999987543  334467999999999999999999999987765     789


Q ss_pred             EEEeccCCCCHHHHHhccCCCCCCchhh
Q 013018          419 LVYEFVPNKSLDYFLYAQSPKNNNNWIG  446 (451)
Q Consensus       419 lv~ey~~~GsL~~~L~~~~~~~~l~W~~  446 (451)
                      +++||++ ++|.++++...   .++|..
T Consensus        81 lv~e~~~-~~l~~~l~~~~---~l~~~~  104 (330)
T cd07834          81 IVTELME-TDLHKVIKSPQ---PLTDDH  104 (330)
T ss_pred             EEecchh-hhHHHHHhCCC---CCCHHH
Confidence            9999998 58999987643   355554

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.63  E-value=4.7e-09  Score=105.31  Aligned_cols=88  Identities=24%  Similarity=0.382  Sum_probs=76.9

Q ss_pred             ccccceecccCceeEEEEEcC-CCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEeccCC
Q 013018          348 FSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPN  426 (451)
Q Consensus       348 ~~~~~~lG~G~fg~V~~~~l~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~~~  426 (451)
                      +.++..||.|+||.|||++-+ .+...|-|.+...+.+..++|+-||++|+...||+||+|++.+...+.+||+.|||.+
T Consensus        34 WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~G  113 (1187)
T KOG0579|consen   34 WEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCGG  113 (1187)
T ss_pred             HHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecCC
Confidence            445678999999999999954 3455678888888888889999999999999999999999999989999999999999


Q ss_pred             CCHHHHHhc
Q 013018          427 KSLDYFLYA  435 (451)
Q Consensus       427 GsL~~~L~~  435 (451)
                      |-.+..+-.
T Consensus       114 GAVDaimlE  122 (1187)
T KOG0579|consen  114 GAVDAIMLE  122 (1187)
T ss_pred             chHhHHHHH
Confidence            998877664

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=98.62  E-value=1.5e-07  Score=92.84  Aligned_cols=91  Identities=21%  Similarity=0.381  Sum_probs=74.5

Q ss_pred             hhccccccceecccCceeEEEEE-cCCCcEEEEEEeccCC--hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCc-----
Q 013018          344 ATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSS--GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGE-----  415 (451)
Q Consensus       344 ~~~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~-----  415 (451)
                      ..++|+..+.||+|+||.||++. ..++..||||.+....  ......+.+|+.++++++||||+++.+++....     
T Consensus        13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   92 (343)
T cd07880          13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRF   92 (343)
T ss_pred             cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccccc
Confidence            45678889999999999999998 5578999999986432  223456889999999999999999999886543     


Q ss_pred             -eeeEEEeccCCCCHHHHHhc
Q 013018          416 -EKILVYEFVPNKSLDYFLYA  435 (451)
Q Consensus       416 -~~~lv~ey~~~GsL~~~L~~  435 (451)
                       ..++|+||+ +++|.+++..
T Consensus        93 ~~~~lv~e~~-~~~l~~~~~~  112 (343)
T cd07880          93 HDFYLVMPFM-GTDLGKLMKH  112 (343)
T ss_pred             ceEEEEEecC-CCCHHHHHhc
Confidence             358999998 7799988864

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=98.61  E-value=1.9e-07  Score=92.20  Aligned_cols=96  Identities=23%  Similarity=0.368  Sum_probs=77.0

Q ss_pred             HHHHHhhccccccceecccCceeEEEEE-cCCCcEEEEEEeccCC--hhhHHHHHHHHHHHhcCCCCCcccceeEEEeC-
Q 013018          339 ETIEVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSS--GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEG-  414 (451)
Q Consensus       339 ~~l~~~~~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-  414 (451)
                      .++...+++|...+.||+|+||.||++. ..+++.||+|++....  ....+.+.+|+.++.+++||||+++.+++... 
T Consensus        10 ~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~   89 (345)
T cd07877          10 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPAR   89 (345)
T ss_pred             HHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeecc
Confidence            4455667889999999999999999998 5678999999986532  22346788999999999999999999987643 


Q ss_pred             -----ceeeEEEeccCCCCHHHHHhc
Q 013018          415 -----EEKILVYEFVPNKSLDYFLYA  435 (451)
Q Consensus       415 -----~~~~lv~ey~~~GsL~~~L~~  435 (451)
                           ...++++|++ +++|.++++.
T Consensus        90 ~~~~~~~~~lv~~~~-~~~L~~~~~~  114 (345)
T cd07877          90 SLEEFNDVYLVTHLM-GADLNNIVKC  114 (345)
T ss_pred             cccccccEEEEehhc-ccCHHHHHhc
Confidence                 2367888876 7899988875

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=98.61  E-value=5.3e-08  Score=92.19  Aligned_cols=90  Identities=21%  Similarity=0.396  Sum_probs=74.5

Q ss_pred             cccccceecccCceeEEEEE-cCCCcEEEEEEecc--CChhhHHHHHHHHHHHhcCCCCCcccceeEEEe-----Cceee
Q 013018          347 NFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSR--SSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLE-----GEEKI  418 (451)
Q Consensus       347 ~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~-----~~~~~  418 (451)
                      .+...+.||+|+||.|.++. -.+|+.||||++..  ......+.-.+|+++|+.++|+||+.+..+...     -..+|
T Consensus        23 ~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvY  102 (359)
T KOG0660|consen   23 YYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVY  102 (359)
T ss_pred             eecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccceeE
Confidence            34446889999999999998 56789999999973  334445778999999999999999999988765     34789


Q ss_pred             EEEeccCCCCHHHHHhccC
Q 013018          419 LVYEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       419 lv~ey~~~GsL~~~L~~~~  437 (451)
                      +|+|+|+ -+|.+.|+.++
T Consensus       103 iV~elMe-tDL~~iik~~~  120 (359)
T KOG0660|consen  103 LVFELME-TDLHQIIKSQQ  120 (359)
T ss_pred             EehhHHh-hHHHHHHHcCc
Confidence            9999995 49999998754

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=98.61  E-value=1.1e-07  Score=93.70  Aligned_cols=89  Identities=21%  Similarity=0.333  Sum_probs=74.6

Q ss_pred             ccccccceecccCceeEEEEE-cCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeC----------
Q 013018          346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEG----------  414 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~----------  414 (451)
                      .+|...+.||+|+||.||++. ...+..|++|.+........+.+.+|+.++++++||||+++++.....          
T Consensus         5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~   84 (342)
T cd07854           5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGS   84 (342)
T ss_pred             cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccc
Confidence            467888999999999999998 456889999998766555567899999999999999999999776543          


Q ss_pred             ----ceeeEEEeccCCCCHHHHHhc
Q 013018          415 ----EEKILVYEFVPNKSLDYFLYA  435 (451)
Q Consensus       415 ----~~~~lv~ey~~~GsL~~~L~~  435 (451)
                          ...++|+||++ ++|.+++..
T Consensus        85 ~~~~~~~~lv~e~~~-~~L~~~~~~  108 (342)
T cd07854          85 LTELNSVYIVQEYME-TDLANVLEQ  108 (342)
T ss_pred             ccccceEEEEeeccc-ccHHHHHHc
Confidence                35789999997 599988864

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=98.61  E-value=1.8e-07  Score=90.12  Aligned_cols=100  Identities=20%  Similarity=0.311  Sum_probs=78.2

Q ss_pred             hccccccceecccCceeEEEEEcCC-CcEEEEEEeccCC-hhhHHHHHHHHHHHhcCC-CCCcccceeEEEeCceeeEEE
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSRSS-GQGGQEFKNEVVLVAKLQ-HRNLVRLLGFCLEGEEKILVY  421 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~l~~-g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~lv~  421 (451)
                      .++|...+.||+|+||.||++.... +..++||.+.... .....++.+|+.++.+.+ |+||+++++.+......++++
T Consensus        14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~   93 (296)
T cd06618          14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICM   93 (296)
T ss_pred             cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEe
Confidence            3556778999999999999999654 8899999997542 233456778888777775 999999999999999999999


Q ss_pred             eccCCCCHHHHHhccCCCCCCchhhh
Q 013018          422 EFVPNKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       422 ey~~~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                      ||++ ++|.+++....  ..++|.++
T Consensus        94 e~~~-~~l~~l~~~~~--~~l~~~~~  116 (296)
T cd06618          94 ELMS-TCLDKLLKRIQ--GPIPEDIL  116 (296)
T ss_pred             eccC-cCHHHHHHHhc--CCCCHHHH
Confidence            9985 47777766532  25676654

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=98.60  E-value=6.1e-08  Score=98.27  Aligned_cols=92  Identities=23%  Similarity=0.378  Sum_probs=77.9

Q ss_pred             cccccceecccCceeEEEEE-cCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCC-C-----CCcccceeEEEeCceeeE
Q 013018          347 NFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQ-H-----RNLVRLLGFCLEGEEKIL  419 (451)
Q Consensus       347 ~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-h-----~niv~l~g~~~~~~~~~l  419 (451)
                      +|...+.||+|.||+|.|+. ...++.||||+++.... -..+-..|+.+|..|+ |     -|+|++++++...++.+|
T Consensus       187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~-f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlci  265 (586)
T KOG0667|consen  187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKR-FLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCI  265 (586)
T ss_pred             EEEEEEEecccccceeEEEEecCCCcEEEEEeeccChH-HHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceee
Confidence            67889999999999999999 67799999999976532 2345677899998886 4     489999999999999999


Q ss_pred             EEeccCCCCHHHHHhccCCCC
Q 013018          420 VYEFVPNKSLDYFLYAQSPKN  440 (451)
Q Consensus       420 v~ey~~~GsL~~~L~~~~~~~  440 (451)
                      |+|.+.. +|.+||+.++...
T Consensus       266 VfELL~~-NLYellK~n~f~G  285 (586)
T KOG0667|consen  266 VFELLST-NLYELLKNNKFRG  285 (586)
T ss_pred             eehhhhh-hHHHHHHhcCCCC
Confidence            9999965 9999999877543

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=98.59  E-value=2.4e-07  Score=88.51  Aligned_cols=91  Identities=22%  Similarity=0.267  Sum_probs=68.3

Q ss_pred             eecccCceeEEEEEc-CCCcEEEEEEeccCCh---hhHHHHHHHHHHH---hcCCCCCcccceeEEEeCceeeEEEeccC
Q 013018          353 KLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSG---QGGQEFKNEVVLV---AKLQHRNLVRLLGFCLEGEEKILVYEFVP  425 (451)
Q Consensus       353 ~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~~---~~~~~~~~E~~~l---~~l~h~niv~l~g~~~~~~~~~lv~ey~~  425 (451)
                      .||+|+||.||++.. .+++.+|+|.+.....   .....+.+|..++   ...+|||++.+.+.+...+..++|+||++
T Consensus         1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~   80 (279)
T cd05633           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN   80 (279)
T ss_pred             CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence            489999999999994 5688999998865321   1223344554333   33479999999999988889999999999


Q ss_pred             CCCHHHHHhccCCCCCCchhh
Q 013018          426 NKSLDYFLYAQSPKNNNNWIG  446 (451)
Q Consensus       426 ~GsL~~~L~~~~~~~~l~W~~  446 (451)
                      +|+|.+++..+.   .++|.+
T Consensus        81 ~~~L~~~i~~~~---~l~~~~   98 (279)
T cd05633          81 GGDLHYHLSQHG---VFSEKE   98 (279)
T ss_pred             CCCHHHHHHhcC---CCCHHH
Confidence            999999998643   255554

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=98.59  E-value=2.2e-07  Score=90.39  Aligned_cols=83  Identities=22%  Similarity=0.392  Sum_probs=67.4

Q ss_pred             cceecccCceeEEEEEcC---CCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEe--CceeeEEEeccC
Q 013018          351 DNKLGEGGFGEVYKGVLP---SGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLE--GEEKILVYEFVP  425 (451)
Q Consensus       351 ~~~lG~G~fg~V~~~~l~---~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~--~~~~~lv~ey~~  425 (451)
                      ..+||+|+||.||++...   .++.+|+|.+....  ....+.+|+.++++++||||+++.+.+..  ....++++||++
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~   83 (317)
T cd07868           6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE   83 (317)
T ss_pred             ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC
Confidence            468999999999999853   45789999986542  23467899999999999999999998754  456889999986


Q ss_pred             CCCHHHHHhcc
Q 013018          426 NKSLDYFLYAQ  436 (451)
Q Consensus       426 ~GsL~~~L~~~  436 (451)
                       ++|.+++...
T Consensus        84 -~~l~~~~~~~   93 (317)
T cd07868          84 -HDLWHIIKFH   93 (317)
T ss_pred             -CCHHHHHHhc
Confidence             5898888753

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.58  E-value=5.7e-08  Score=98.88  Aligned_cols=92  Identities=23%  Similarity=0.303  Sum_probs=77.1

Q ss_pred             HhhccccccceecccCceeEEEEEc-CCCcEEEEEEeccC---ChhhHHHHHHHHHHHhcC-CCCCcccceeEEEeCcee
Q 013018          343 VATNNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRS---SGQGGQEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEK  417 (451)
Q Consensus       343 ~~~~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~  417 (451)
                      ...++|....+||+|.||+|+.+.+ .+++..|||.+++.   ...+.+..+.|-+++.-. +||-|++|..++.+.+++
T Consensus       365 ~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l  444 (694)
T KOG0694|consen  365 LTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHL  444 (694)
T ss_pred             ccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeE
Confidence            3456788999999999999999995 45788999999865   344567788888888777 599999999999999999


Q ss_pred             eEEEeccCCCCHHHHHh
Q 013018          418 ILVYEFVPNKSLDYFLY  434 (451)
Q Consensus       418 ~lv~ey~~~GsL~~~L~  434 (451)
                      +.||||..+|++..+.+
T Consensus       445 ~fvmey~~Ggdm~~~~~  461 (694)
T KOG0694|consen  445 FFVMEYVAGGDLMHHIH  461 (694)
T ss_pred             EEEEEecCCCcEEEEEe
Confidence            99999999999654444

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=98.58  E-value=1.8e-07  Score=89.12  Aligned_cols=96  Identities=24%  Similarity=0.326  Sum_probs=78.2

Q ss_pred             cccceecccCceeEEEEEc-CCCcEEEEEEeccCCh--hhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEeccC
Q 013018          349 STDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSG--QGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVP  425 (451)
Q Consensus       349 ~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~~  425 (451)
                      +..+.||+|++|.||++.. .+++.+++|.+.....  .....+.+|+.++++++|+||+++.+.+..+...++++||++
T Consensus         2 ~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~   81 (283)
T cd05118           2 QKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFMD   81 (283)
T ss_pred             ccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEeccC
Confidence            4567899999999999995 4688999999875432  234678899999999999999999999999999999999997


Q ss_pred             CCCHHHHHhccCCCCCCchhhh
Q 013018          426 NKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       426 ~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                      + +|.+++....  ..++|.++
T Consensus        82 ~-~l~~~l~~~~--~~~~~~~~  100 (283)
T cd05118          82 T-DLYKLIKDRQ--RGLPESLI  100 (283)
T ss_pred             C-CHHHHHHhhc--ccCCHHHH
Confidence            5 8999888643  23555544

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=98.58  E-value=2.2e-07  Score=92.36  Aligned_cols=90  Identities=21%  Similarity=0.337  Sum_probs=72.7

Q ss_pred             hccccccceecccCceeEEEEE-cCCCcEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeC------c
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRS--SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEG------E  415 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~------~  415 (451)
                      .++|...+.||+|+||.||++. ...++.||||++...  .......+.+|+.+++.++||||+++++++...      .
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~  102 (364)
T cd07875          23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ  102 (364)
T ss_pred             hcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccC
Confidence            4578889999999999999998 456889999998753  223346788999999999999999999987543      3


Q ss_pred             eeeEEEeccCCCCHHHHHhc
Q 013018          416 EKILVYEFVPNKSLDYFLYA  435 (451)
Q Consensus       416 ~~~lv~ey~~~GsL~~~L~~  435 (451)
                      ..++||||+++ +|.+++..
T Consensus       103 ~~~lv~e~~~~-~l~~~~~~  121 (364)
T cd07875         103 DVYIVMELMDA-NLCQVIQM  121 (364)
T ss_pred             eEEEEEeCCCC-CHHHHHHh
Confidence            57899999965 77777753

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=98.58  E-value=1.7e-07  Score=92.37  Aligned_cols=90  Identities=23%  Similarity=0.365  Sum_probs=73.0

Q ss_pred             hccccccceecccCceeEEEEE-cCCCcEEEEEEeccCC--hhhHHHHHHHHHHHhcCCCCCcccceeEEEeC------c
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSS--GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEG------E  415 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~------~  415 (451)
                      .++|...+.||+|+||.||++. ..++..||||.+....  ......+.+|+.++++++||||+++++++...      .
T Consensus        14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   93 (343)
T cd07878          14 PERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFN   93 (343)
T ss_pred             hhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccccC
Confidence            4678888999999999999998 4578899999986532  22345688999999999999999999877532      3


Q ss_pred             eeeEEEeccCCCCHHHHHhc
Q 013018          416 EKILVYEFVPNKSLDYFLYA  435 (451)
Q Consensus       416 ~~~lv~ey~~~GsL~~~L~~  435 (451)
                      ..++++|++ +++|.++++.
T Consensus        94 ~~~~~~~~~-~~~l~~~~~~  112 (343)
T cd07878          94 EVYLVTNLM-GADLNNIVKC  112 (343)
T ss_pred             cEEEEeecC-CCCHHHHHhc
Confidence            568999987 7899988864

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=98.58  E-value=3.7e-07  Score=86.68  Aligned_cols=94  Identities=16%  Similarity=0.162  Sum_probs=69.2

Q ss_pred             ccccccce--ecccCceeEEEEE-cCCCcEEEEEEeccCChhhHHHHHHHHHHHhcC-CCCCcccceeEEEeCceeeEEE
Q 013018          346 NNFSTDNK--LGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKILVY  421 (451)
Q Consensus       346 ~~~~~~~~--lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lv~  421 (451)
                      +++...+.  ||+|+||.||++. ..++..+++|.+........     |+.....+ +|||++++++.+...+..++|+
T Consensus        14 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-----e~~~~~~~~~h~~iv~~~~~~~~~~~~~iv~   88 (267)
T PHA03390         14 KNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI-----EPMVHQLMKDNPNFIKLYYSVTTLKGHVLIM   88 (267)
T ss_pred             HhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh-----hHHHHHHhhcCCCEEEEEEEEecCCeeEEEE
Confidence            44555555  4999999999998 45678899998864321111     22222212 6999999999999999999999


Q ss_pred             eccCCCCHHHHHhccCCCCCCchhhh
Q 013018          422 EFVPNKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       422 ey~~~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                      ||+++|+|.++++...   .++|.+.
T Consensus        89 e~~~~~~L~~~l~~~~---~l~~~~~  111 (267)
T PHA03390         89 DYIKDGDLFDLLKKEG---KLSEAEV  111 (267)
T ss_pred             EcCCCCcHHHHHHhcC---CCCHHHH
Confidence            9999999999998653   4666554

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=98.58  E-value=2e-07  Score=91.56  Aligned_cols=90  Identities=20%  Similarity=0.374  Sum_probs=73.7

Q ss_pred             hccccccceecccCceeEEEEE-cCCCcEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCcccceeEEEeC-----cee
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSS-GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEG-----EEK  417 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-----~~~  417 (451)
                      .++|+..++||+|+||.||++. ..+|+.|++|.+.... ......+.+|+.++.+++|+||+++++++...     ...
T Consensus         4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~   83 (336)
T cd07849           4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV   83 (336)
T ss_pred             ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence            3568889999999999999998 5578999999986432 23346788999999999999999999987653     357


Q ss_pred             eEEEeccCCCCHHHHHhc
Q 013018          418 ILVYEFVPNKSLDYFLYA  435 (451)
Q Consensus       418 ~lv~ey~~~GsL~~~L~~  435 (451)
                      ++++||++ ++|.++++.
T Consensus        84 ~lv~e~~~-~~l~~~~~~  100 (336)
T cd07849          84 YIVQELME-TDLYKLIKT  100 (336)
T ss_pred             EEEehhcc-cCHHHHHhc
Confidence            89999996 488888765

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=98.57  E-value=1.8e-07  Score=90.83  Aligned_cols=86  Identities=16%  Similarity=0.162  Sum_probs=70.9

Q ss_pred             cceecccCceeEEEEEcCCCcEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEeccCCCC
Q 013018          351 DNKLGEGGFGEVYKGVLPSGQEIAVKRLSRS--SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKS  428 (451)
Q Consensus       351 ~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~~~Gs  428 (451)
                      .+.+|.|+++.|+++.. +++.+|||++...  .....+.+.+|+.++++++|+||+++++++...+..++++||+++|+
T Consensus         7 ~~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~   85 (314)
T cd08216           7 GKCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGS   85 (314)
T ss_pred             hHhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCC
Confidence            34455566666666666 7899999998754  33445789999999999999999999999999999999999999999


Q ss_pred             HHHHHhccC
Q 013018          429 LDYFLYAQS  437 (451)
Q Consensus       429 L~~~L~~~~  437 (451)
                      |.++++...
T Consensus        86 l~~~l~~~~   94 (314)
T cd08216          86 CEDLLKTHF   94 (314)
T ss_pred             HHHHHHHhc
Confidence            999998653

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=98.57  E-value=1.9e-07  Score=91.91  Aligned_cols=90  Identities=17%  Similarity=0.383  Sum_probs=73.6

Q ss_pred             ccccccceecccCceeEEEEE-cCCCcEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeC-----cee
Q 013018          346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRS--SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEG-----EEK  417 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-----~~~  417 (451)
                      ++|...+.||+|+||.||++. ..++..|+||.+...  .......+.+|+.++..++|+||+++++++...     ...
T Consensus         5 ~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~   84 (337)
T cd07858           5 TKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDV   84 (337)
T ss_pred             cceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcE
Confidence            457788999999999999998 457899999998653  222345678999999999999999999987653     247


Q ss_pred             eEEEeccCCCCHHHHHhcc
Q 013018          418 ILVYEFVPNKSLDYFLYAQ  436 (451)
Q Consensus       418 ~lv~ey~~~GsL~~~L~~~  436 (451)
                      ++++||+. ++|.+++...
T Consensus        85 ~lv~e~~~-~~L~~~~~~~  102 (337)
T cd07858          85 YIVYELMD-TDLHQIIRSS  102 (337)
T ss_pred             EEEEeCCC-CCHHHHHhcC
Confidence            99999996 7899988754

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=98.56  E-value=2.9e-07  Score=88.09  Aligned_cols=88  Identities=30%  Similarity=0.483  Sum_probs=68.2

Q ss_pred             ccccceecccCceeEEEEE-cCCCcEEEEEEeccCCh--hhHHHHHHHHHHHhcC---CCCCcccceeEEEe-----Cce
Q 013018          348 FSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSG--QGGQEFKNEVVLVAKL---QHRNLVRLLGFCLE-----GEE  416 (451)
Q Consensus       348 ~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l---~h~niv~l~g~~~~-----~~~  416 (451)
                      |...+.||+|+||.||++. ..+++.||+|.+.....  .....+.+|+.++..+   +||||+++++++..     ...
T Consensus         2 y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~   81 (288)
T cd07863           2 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETK   81 (288)
T ss_pred             ceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCce
Confidence            5667899999999999998 45788999999875322  1224566777777665   69999999998764     235


Q ss_pred             eeEEEeccCCCCHHHHHhcc
Q 013018          417 KILVYEFVPNKSLDYFLYAQ  436 (451)
Q Consensus       417 ~~lv~ey~~~GsL~~~L~~~  436 (451)
                      .++++||++ ++|.++++..
T Consensus        82 ~~lv~e~~~-~~l~~~~~~~  100 (288)
T cd07863          82 VTLVFEHVD-QDLRTYLDKV  100 (288)
T ss_pred             EEEEEcccc-cCHHHHHHhc
Confidence            789999997 5899998764

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=98.56  E-value=1.6e-07  Score=92.23  Aligned_cols=90  Identities=14%  Similarity=0.347  Sum_probs=74.1

Q ss_pred             ccccccceecccCceeEEEEE-cCCCcEEEEEEeccCC--hhhHHHHHHHHHHHhcCCCCCcccceeEEEe----Cceee
Q 013018          346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSS--GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLE----GEEKI  418 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~----~~~~~  418 (451)
                      ++|+..+.||+|+||.||++. ..++..|++|++....  ......+.+|+.++.+++||||+++.+++..    ....+
T Consensus         5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   84 (334)
T cd07855           5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVY   84 (334)
T ss_pred             hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEE
Confidence            567888999999999999999 4568999999987542  2334678899999999999999999987653    34678


Q ss_pred             EEEeccCCCCHHHHHhcc
Q 013018          419 LVYEFVPNKSLDYFLYAQ  436 (451)
Q Consensus       419 lv~ey~~~GsL~~~L~~~  436 (451)
                      +|+||++ |+|.+++...
T Consensus        85 lv~e~~~-~~l~~~~~~~  101 (334)
T cd07855          85 VVMDLME-SDLHHIIHSD  101 (334)
T ss_pred             EEEehhh-hhHHHHhccC
Confidence            9999995 6999998754

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>PRK10345 hypothetical protein; Provisional

Probab=98.55  E-value=2.9e-07  Score=83.81  Aligned_cols=87  Identities=21%  Similarity=0.299  Sum_probs=68.1

Q ss_pred             ccccceecccCceeEEEEEcCCCcEEEEEEeccCChhhHHHHHHHHHHHhcC-----CCCCcccceeEEEeCc---eee-
Q 013018          348 FSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKL-----QHRNLVRLLGFCLEGE---EKI-  418 (451)
Q Consensus       348 ~~~~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l-----~h~niv~l~g~~~~~~---~~~-  418 (451)
                      ++..+.||+|+||.||. ...++.. +||++........+.+.+|+.++..+     .||||++++|+..++.   .++ 
T Consensus         4 L~~~~~LG~G~~~~Vy~-hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~   81 (210)
T PRK10345          4 LSEQSPLGTGRHRKCYA-HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYD   81 (210)
T ss_pred             cCCcceecCCCceEEEE-CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEE
Confidence            45578999999999996 3234444 68988765444557899999999999     5799999999998763   434 


Q ss_pred             EEEec--cCCCCHHHHHhcc
Q 013018          419 LVYEF--VPNKSLDYFLYAQ  436 (451)
Q Consensus       419 lv~ey--~~~GsL~~~L~~~  436 (451)
                      +|+||  ++.|+|.++|.+.
T Consensus        82 ~I~e~~G~~~~tL~~~l~~~  101 (210)
T PRK10345         82 VIADFDGKPSITLTEFAEQC  101 (210)
T ss_pred             EEecCCCCcchhHHHHHHcc
Confidence            78999  6689999999763

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=98.54  E-value=2.3e-08  Score=92.74  Aligned_cols=92  Identities=23%  Similarity=0.435  Sum_probs=74.2

Q ss_pred             ccccccceecccCceeEEEEEcCC---C--cEEEEEEeccCChh-h-HHHHHHHHHHHhcCCCCCcccceeEEEe-Ccee
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVLPS---G--QEIAVKRLSRSSGQ-G-GQEFKNEVVLVAKLQHRNLVRLLGFCLE-GEEK  417 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l~~---g--~~vavK~l~~~~~~-~-~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~  417 (451)
                      ..|+....||+|.||.||+++-++   .  ...|+|+++..... . .....+|+.+++.++||||++|..+... +..+
T Consensus        24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v  103 (438)
T KOG0666|consen   24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKV  103 (438)
T ss_pred             HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceE
Confidence            356778899999999999997322   2  26899999755322 1 2567899999999999999999998887 6789


Q ss_pred             eEEEeccCCCCHHHHHhccCC
Q 013018          418 ILVYEFVPNKSLDYFLYAQSP  438 (451)
Q Consensus       418 ~lv~ey~~~GsL~~~L~~~~~  438 (451)
                      +|++||.++ +|.+.|+.++.
T Consensus       104 ~l~fdYAEh-DL~~II~fHr~  123 (438)
T KOG0666|consen  104 WLLFDYAEH-DLWHIIKFHRA  123 (438)
T ss_pred             EEEehhhhh-hHHHHHHHhcc
Confidence            999999988 99999987553

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=98.54  E-value=3.5e-07  Score=87.31  Aligned_cols=98  Identities=27%  Similarity=0.372  Sum_probs=74.7

Q ss_pred             ccccceecccCceeEEEEEcC-CCcEEEEEEeccCCh--hhHHHHHHHHHHHhcC---CCCCcccceeEEEeCce-----
Q 013018          348 FSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSRSSG--QGGQEFKNEVVLVAKL---QHRNLVRLLGFCLEGEE-----  416 (451)
Q Consensus       348 ~~~~~~lG~G~fg~V~~~~l~-~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l---~h~niv~l~g~~~~~~~-----  416 (451)
                      |+..+.||+|+||.||++... ++..+++|.+.....  .....+.+|+.++.++   .|+|++++++.+...+.     
T Consensus         1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~   80 (287)
T cd07838           1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK   80 (287)
T ss_pred             CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence            355789999999999999965 489999999974322  2234577788777655   69999999999988776     


Q ss_pred             eeEEEeccCCCCHHHHHhccCCCCCCchhhh
Q 013018          417 KILVYEFVPNKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       417 ~~lv~ey~~~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                      .++++||++ ++|.+++..... ..++|...
T Consensus        81 ~~l~~e~~~-~~l~~~l~~~~~-~~l~~~~~  109 (287)
T cd07838          81 LTLVFEHVD-QDLATYLSKCPK-PGLPPETI  109 (287)
T ss_pred             eEEEehhcc-cCHHHHHHHccC-CCCCHHHH
Confidence            899999997 589999876432 24666543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=98.54  E-value=2.3e-07  Score=91.91  Aligned_cols=91  Identities=22%  Similarity=0.347  Sum_probs=72.9

Q ss_pred             hhccccccceecccCceeEEEEE-cCCCcEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeC------
Q 013018          344 ATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRS--SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEG------  414 (451)
Q Consensus       344 ~~~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~------  414 (451)
                      ..++|...+.||+|+||.||++. ...++.+|||.+...  .......+.+|+.+++.++||||+++++++...      
T Consensus        15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~   94 (355)
T cd07874          15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF   94 (355)
T ss_pred             hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence            34678889999999999999998 446889999998753  223346788999999999999999999987643      


Q ss_pred             ceeeEEEeccCCCCHHHHHhc
Q 013018          415 EEKILVYEFVPNKSLDYFLYA  435 (451)
Q Consensus       415 ~~~~lv~ey~~~GsL~~~L~~  435 (451)
                      ...++|+||+++ +|.+++..
T Consensus        95 ~~~~lv~e~~~~-~l~~~~~~  114 (355)
T cd07874          95 QDVYLVMELMDA-NLCQVIQM  114 (355)
T ss_pred             ceeEEEhhhhcc-cHHHHHhh
Confidence            256899999965 67777653

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=98.54  E-value=3.7e-09  Score=94.82  Aligned_cols=88  Identities=31%  Similarity=0.423  Sum_probs=74.3

Q ss_pred             ccccccceecccCceeEEEEE-cCCCcEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEe
Q 013018          346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRS--SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  422 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  422 (451)
                      +.|+.-++||+|.|+.|++.. .+.|+..|+|+++..  +..+.+++.+|+.+...|+|||||+|.....+....+||+|
T Consensus        11 d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvFe   90 (355)
T KOG0033|consen   11 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFD   90 (355)
T ss_pred             hhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEEe
Confidence            456667899999999999987 667888888887633  33356889999999999999999999999888889999999


Q ss_pred             ccCCCCHHHHH
Q 013018          423 FVPNKSLDYFL  433 (451)
Q Consensus       423 y~~~GsL~~~L  433 (451)
                      +|++|+|..=|
T Consensus        91 ~m~G~dl~~eI  101 (355)
T KOG0033|consen   91 LVTGGELFEDI  101 (355)
T ss_pred             cccchHHHHHH
Confidence            99999986543

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=98.54  E-value=4.4e-07  Score=86.62  Aligned_cols=92  Identities=24%  Similarity=0.270  Sum_probs=69.4

Q ss_pred             eecccCceeEEEEEc-CCCcEEEEEEeccCCh---hhHHHHHHHHH---HHhcCCCCCcccceeEEEeCceeeEEEeccC
Q 013018          353 KLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSG---QGGQEFKNEVV---LVAKLQHRNLVRLLGFCLEGEEKILVYEFVP  425 (451)
Q Consensus       353 ~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~~---~~~~~~~~E~~---~l~~l~h~niv~l~g~~~~~~~~~lv~ey~~  425 (451)
                      .||+|+||.||++.. ..++.||+|.+.....   +....+..|..   .+...+||||+++.+.+...+..++|+||++
T Consensus         1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   80 (278)
T cd05606           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN   80 (278)
T ss_pred             CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence            489999999999984 5688999999865421   11223444443   4445679999999999998899999999999


Q ss_pred             CCCHHHHHhccCCCCCCchhhh
Q 013018          426 NKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       426 ~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                      +|+|.+++....   .++|..+
T Consensus        81 g~~L~~~l~~~~---~l~~~~~   99 (278)
T cd05606          81 GGDLHYHLSQHG---VFSEAEM   99 (278)
T ss_pred             CCcHHHHHHhcC---CCCHHHH
Confidence            999999987532   3666654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=98.53  E-value=1.9e-07  Score=90.26  Aligned_cols=91  Identities=27%  Similarity=0.434  Sum_probs=72.6

Q ss_pred             hccccccceecccCceeEEEEEc-CCCcEEEEEEeccCChh--hHHHHHHHHHHHhcCCCCCcccceeEEEeCc------
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSGQ--GGQEFKNEVVLVAKLQHRNLVRLLGFCLEGE------  415 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~------  415 (451)
                      .++|+..++||+|+||.||++.. .+++.+++|.+......  ....+.+|++++.+++|+||++++++.....      
T Consensus         7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   86 (311)
T cd07866           7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK   86 (311)
T ss_pred             cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence            46788899999999999999994 56889999998644222  2346789999999999999999998875433      


Q ss_pred             --eeeEEEeccCCCCHHHHHhcc
Q 013018          416 --EKILVYEFVPNKSLDYFLYAQ  436 (451)
Q Consensus       416 --~~~lv~ey~~~GsL~~~L~~~  436 (451)
                        ..++|+||++. +|.+++...
T Consensus        87 ~~~~~lv~~~~~~-~l~~~~~~~  108 (311)
T cd07866          87 RGSVYMVTPYMDH-DLSGLLENP  108 (311)
T ss_pred             CceEEEEEecCCc-CHHHHHhcc
Confidence              46899999965 788877754

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=98.53  E-value=3.5e-07  Score=88.91  Aligned_cols=82  Identities=23%  Similarity=0.393  Sum_probs=66.7

Q ss_pred             cceecccCceeEEEEEcC---CCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEe--CceeeEEEeccC
Q 013018          351 DNKLGEGGFGEVYKGVLP---SGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLE--GEEKILVYEFVP  425 (451)
Q Consensus       351 ~~~lG~G~fg~V~~~~l~---~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~--~~~~~lv~ey~~  425 (451)
                      ..+||+|+||.||++...   .+..+|+|.+....  ....+.+|+.++++++||||+++.+++..  ....++++||++
T Consensus         6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~   83 (317)
T cd07867           6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE   83 (317)
T ss_pred             ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC
Confidence            468999999999999854   34689999886542  23468899999999999999999998854  457789999986


Q ss_pred             CCCHHHHHhc
Q 013018          426 NKSLDYFLYA  435 (451)
Q Consensus       426 ~GsL~~~L~~  435 (451)
                      + +|.+++..
T Consensus        84 ~-~l~~~~~~   92 (317)
T cd07867          84 H-DLWHIIKF   92 (317)
T ss_pred             C-cHHHHHHh
Confidence            4 88888764

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=98.52  E-value=2.9e-07  Score=88.11  Aligned_cols=86  Identities=24%  Similarity=0.400  Sum_probs=70.0

Q ss_pred             cccccceecccCceeEEEEE-cCCCcEEEEEEeccCC-hhhHHHHHHHHHHHhcCC-CCCcccceeEEEeCceeeEEEec
Q 013018          347 NFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSS-GQGGQEFKNEVVLVAKLQ-HRNLVRLLGFCLEGEEKILVYEF  423 (451)
Q Consensus       347 ~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~lv~ey  423 (451)
                      +|...++||+|+||.||++. ..+++.+|+|.+.... ......+.+|+.++.++. |+||+++++.+......++++||
T Consensus         5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~   84 (288)
T cd06616           5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMEL   84 (288)
T ss_pred             HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEec
Confidence            45556789999999999998 4568999999987543 234567899999999996 99999999999888889999999


Q ss_pred             cCCCCHHHHH
Q 013018          424 VPNKSLDYFL  433 (451)
Q Consensus       424 ~~~GsL~~~L  433 (451)
                      ++. +|.++.
T Consensus        85 ~~~-~l~~l~   93 (288)
T cd06616          85 MDI-SLDKFY   93 (288)
T ss_pred             ccC-CHHHHH
Confidence            864 555543

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=98.51  E-value=4.3e-07  Score=89.91  Aligned_cols=90  Identities=24%  Similarity=0.383  Sum_probs=73.5

Q ss_pred             hccccccceecccCceeEEEEE-cCCCcEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeC------c
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRS--SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEG------E  415 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~------~  415 (451)
                      .++|+..+.||+|+||.||++. ..+++.+|+|.+...  ......++.+|+.++.+++|+||+++++++...      .
T Consensus        15 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   94 (353)
T cd07850          15 LKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQ   94 (353)
T ss_pred             hcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccC
Confidence            4568888999999999999999 457899999998643  223346788999999999999999999987543      3


Q ss_pred             eeeEEEeccCCCCHHHHHhc
Q 013018          416 EKILVYEFVPNKSLDYFLYA  435 (451)
Q Consensus       416 ~~~lv~ey~~~GsL~~~L~~  435 (451)
                      ..++|+||+. ++|.+++..
T Consensus        95 ~~~lv~e~~~-~~l~~~~~~  113 (353)
T cd07850          95 DVYLVMELMD-ANLCQVIQM  113 (353)
T ss_pred             cEEEEEeccC-CCHHHHHhh
Confidence            4689999995 588888764

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=98.51  E-value=8e-07  Score=79.77  Aligned_cols=83  Identities=33%  Similarity=0.535  Sum_probs=73.2

Q ss_pred             ecccCceeEEEEEcC-CCcEEEEEEeccCChh-hHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEeccCCCCHHH
Q 013018          354 LGEGGFGEVYKGVLP-SGQEIAVKRLSRSSGQ-GGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDY  431 (451)
Q Consensus       354 lG~G~fg~V~~~~l~-~g~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~~~GsL~~  431 (451)
                      ||+|.+|.||++... +++.+++|.+.....+ ..+.+.+|+..+..++|++++++++........++++||+++++|.+
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~   80 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD   80 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence            689999999999964 3899999999765432 34679999999999999999999999998889999999999999999


Q ss_pred             HHhcc
Q 013018          432 FLYAQ  436 (451)
Q Consensus       432 ~L~~~  436 (451)
                      ++...
T Consensus        81 ~~~~~   85 (215)
T cd00180          81 LLKEN   85 (215)
T ss_pred             HHHhc
Confidence            99864

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=98.49  E-value=3.3e-08  Score=105.45  Aligned_cols=110  Identities=18%  Similarity=0.226  Sum_probs=89.0

Q ss_pred             hHHHHHhhccccccceecccCceeEEEEEc-CCCcEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCcccceeEEEe
Q 013018          338 FETIEVATNNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRS---SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLE  413 (451)
Q Consensus       338 ~~~l~~~~~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~  413 (451)
                      ..+++...++|.+.++||+|+||.|...+. ..+..+|+|++++.   ...+..-|..|-.+|.--..+.|+.|.-.+.+
T Consensus        67 v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD  146 (1317)
T KOG0612|consen   67 VKELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQD  146 (1317)
T ss_pred             HHHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcC
Confidence            355667778899999999999999999995 45778899999763   12233568889999988889999999888888


Q ss_pred             CceeeEEEeccCCCCHHHHHhccCCCCCCchhhhh
Q 013018          414 GEEKILVYEFVPNKSLDYFLYAQSPKNNNNWIGQD  448 (451)
Q Consensus       414 ~~~~~lv~ey~~~GsL~~~L~~~~~~~~l~W~~r~  448 (451)
                      ..++|+|||||++|||..+|.... .-+=+|..=|
T Consensus       147 ~~~LYlVMdY~pGGDlltLlSk~~-~~pE~~ArFY  180 (1317)
T KOG0612|consen  147 ERYLYLVMDYMPGGDLLTLLSKFD-RLPEDWARFY  180 (1317)
T ss_pred             ccceEEEEecccCchHHHHHhhcC-CChHHHHHHH
Confidence            899999999999999999998765 3445776533

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=98.45  E-value=7e-07  Score=88.05  Aligned_cols=88  Identities=23%  Similarity=0.435  Sum_probs=70.9

Q ss_pred             ccccccceecccCceeEEEEE-cCCCcEEEEEEeccCC--hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCc------e
Q 013018          346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSS--GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGE------E  416 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~------~  416 (451)
                      ++|...+.||+|+||.||+|. ..+++.+|||.+....  ......+.+|+.++.+++||||+++++++....      +
T Consensus        15 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~   94 (342)
T cd07879          15 ERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQD   94 (342)
T ss_pred             cceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCce
Confidence            568888999999999999999 4578999999986432  222356889999999999999999999886542      4


Q ss_pred             eeEEEeccCCCCHHHHHh
Q 013018          417 KILVYEFVPNKSLDYFLY  434 (451)
Q Consensus       417 ~~lv~ey~~~GsL~~~L~  434 (451)
                      .++|+||+.. +|.+++.
T Consensus        95 ~~lv~e~~~~-~l~~~~~  111 (342)
T cd07879          95 FYLVMPYMQT-DLQKIMG  111 (342)
T ss_pred             EEEEeccccc-CHHHHHc
Confidence            6899999964 7777653

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=98.45  E-value=8e-07  Score=81.99  Aligned_cols=80  Identities=25%  Similarity=0.401  Sum_probs=70.5

Q ss_pred             CceeEEEEEcC-CCcEEEEEEeccCChhh-HHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEeccCCCCHHHHHhc
Q 013018          358 GFGEVYKGVLP-SGQEIAVKRLSRSSGQG-GQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYA  435 (451)
Q Consensus       358 ~fg~V~~~~l~-~g~~vavK~l~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~~~GsL~~~L~~  435 (451)
                      +||.||++... +++.+++|.+....... .+.+.+|++.+++++|+|++++.+.+......++++||+++++|.+++..
T Consensus         1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~   80 (244)
T smart00220        1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK   80 (244)
T ss_pred             CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence            58999999964 58999999997664444 67899999999999999999999999998999999999999999999986


Q ss_pred             cC
Q 013018          436 QS  437 (451)
Q Consensus       436 ~~  437 (451)
                      ..
T Consensus        81 ~~   82 (244)
T smart00220       81 RG   82 (244)
T ss_pred             cc
Confidence            44

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=98.44  E-value=4.9e-07  Score=89.20  Aligned_cols=90  Identities=22%  Similarity=0.425  Sum_probs=74.0

Q ss_pred             hccccccceecccCceeEEEEEc-CCCcEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCce-----
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRS--SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEE-----  416 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~-----  416 (451)
                      .++|...+.||+|+||.||++.. .+++.++||.+...  .......+.+|+.++++++|+|++++.+.....+.     
T Consensus        14 ~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   93 (343)
T cd07851          14 PDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQ   93 (343)
T ss_pred             cCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccccc
Confidence            45688889999999999999995 46789999988643  22234668899999999999999999987766554     


Q ss_pred             -eeEEEeccCCCCHHHHHhc
Q 013018          417 -KILVYEFVPNKSLDYFLYA  435 (451)
Q Consensus       417 -~~lv~ey~~~GsL~~~L~~  435 (451)
                       .++|+||+ +++|.+++..
T Consensus        94 ~~~lv~e~~-~~~L~~~~~~  112 (343)
T cd07851          94 DVYLVTHLM-GADLNNIVKC  112 (343)
T ss_pred             cEEEEEecC-CCCHHHHHhc
Confidence             89999998 6699999875

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=98.43  E-value=4.8e-08  Score=105.58  Aligned_cols=91  Identities=29%  Similarity=0.437  Sum_probs=79.0

Q ss_pred             ccccceecccCceeEEEEE-cCCCcEEEEEEeccCChh--hHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEecc
Q 013018          348 FSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQ--GGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFV  424 (451)
Q Consensus       348 ~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~  424 (451)
                      .+..+.||.|.||.||.+. +++|+..|+|.+......  ....+.+|+.++..+.|||+|+.+|+-..++..+|.||||
T Consensus      1237 Wqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFMEyC 1316 (1509)
T KOG4645|consen 1237 WQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFMEYC 1316 (1509)
T ss_pred             eccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHHHh
Confidence            4557889999999999999 788999999988754322  2356889999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhccCC
Q 013018          425 PNKSLDYFLYAQSP  438 (451)
Q Consensus       425 ~~GsL~~~L~~~~~  438 (451)
                      ++|+|.+.+...+.
T Consensus      1317 ~~GsLa~ll~~gri 1330 (1509)
T KOG4645|consen 1317 EGGSLASLLEHGRI 1330 (1509)
T ss_pred             ccCcHHHHHHhcch
Confidence            99999999986543

>PTZ00284 protein kinase; Provisional

Probab=98.42  E-value=6.6e-07  Score=92.19  Aligned_cols=96  Identities=21%  Similarity=0.273  Sum_probs=70.8

Q ss_pred             HHHHhhccccccceecccCceeEEEEE-cCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCC------CCCcccceeEEE
Q 013018          340 TIEVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQ------HRNLVRLLGFCL  412 (451)
Q Consensus       340 ~l~~~~~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~------h~niv~l~g~~~  412 (451)
                      ++....++|...++||+|+||.||++. ...++.||||+++... ....++..|+.++..++      |.+++++.+++.
T Consensus       123 ~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~  201 (467)
T PTZ00284        123 DIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQ  201 (467)
T ss_pred             ccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEE
Confidence            334456789999999999999999998 4567899999986432 22345566666666654      445888888776


Q ss_pred             eC-ceeeEEEeccCCCCHHHHHhccC
Q 013018          413 EG-EEKILVYEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       413 ~~-~~~~lv~ey~~~GsL~~~L~~~~  437 (451)
                      .. ...+||+|++ +++|.++|....
T Consensus       202 ~~~~~~~iv~~~~-g~~l~~~l~~~~  226 (467)
T PTZ00284        202 NETGHMCIVMPKY-GPCLLDWIMKHG  226 (467)
T ss_pred             cCCceEEEEEecc-CCCHHHHHHHcC
Confidence            53 4688999988 778999887643

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=98.38  E-value=4.9e-08  Score=98.82  Aligned_cols=92  Identities=23%  Similarity=0.396  Sum_probs=81.1

Q ss_pred             hhccccccceecccCceeEEEEE-cCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEe
Q 013018          344 ATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  422 (451)
Q Consensus       344 ~~~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  422 (451)
                      +.++|.....+|.|.+|.|||++ ...++..|||.++........-...|+.+++..+||||+.++|.+...+.+||.||
T Consensus        13 P~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicME   92 (829)
T KOG0576|consen   13 PQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICME   92 (829)
T ss_pred             CccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEE
Confidence            45667888999999999999999 56789999999987766666778889999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhc
Q 013018          423 FVPNKSLDYFLYA  435 (451)
Q Consensus       423 y~~~GsL~~~L~~  435 (451)
                      |+.+|+|.+.-|-
T Consensus        93 ycgggslQdiy~~  105 (829)
T KOG0576|consen   93 YCGGGSLQDIYHV  105 (829)
T ss_pred             ecCCCcccceeee
Confidence            9999999876553

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=98.37  E-value=1.8e-07  Score=94.45  Aligned_cols=101  Identities=24%  Similarity=0.376  Sum_probs=77.0

Q ss_pred             ccccceecccCceeEEEEEc-CCCcEEEEEEec----cCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCce--eeEE
Q 013018          348 FSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLS----RSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEE--KILV  420 (451)
Q Consensus       348 ~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~----~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~--~~lv  420 (451)
                      ++...+||+|+|-+||||.- ..|-+||=-.++    ..+.+..+.|..|+++|+.|+|+||++++....+...  .-+|
T Consensus        42 ~k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~i  121 (632)
T KOG0584|consen   42 LKFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFI  121 (632)
T ss_pred             eehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeee
Confidence            34567999999999999984 346566432222    1234455889999999999999999999988876554  6799


Q ss_pred             EeccCCCCHHHHHhccCCCC---CCchhhhh
Q 013018          421 YEFVPNKSLDYFLYAQSPKN---NNNWIGQD  448 (451)
Q Consensus       421 ~ey~~~GsL~~~L~~~~~~~---~l~W~~r~  448 (451)
                      +|.+..|+|..|+++.+.-+   ...|..++
T Consensus       122 TEL~TSGtLr~Y~kk~~~vn~kaik~W~RQI  152 (632)
T KOG0584|consen  122 TELFTSGTLREYRKKHRRVNIKAIKSWCRQI  152 (632)
T ss_pred             eecccCCcHHHHHHHhccCCHHHHHHHHHHH
Confidence            99999999999999876432   35786553

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=98.34  E-value=2.3e-06  Score=83.96  Aligned_cols=89  Identities=18%  Similarity=0.287  Sum_probs=69.3

Q ss_pred             ccccceecccCceeEEEEEcC-C--CcEEEEEEeccC--ChhhHHHHHHHHHHHhcC-CCCCcccceeEEEeC----cee
Q 013018          348 FSTDNKLGEGGFGEVYKGVLP-S--GQEIAVKRLSRS--SGQGGQEFKNEVVLVAKL-QHRNLVRLLGFCLEG----EEK  417 (451)
Q Consensus       348 ~~~~~~lG~G~fg~V~~~~l~-~--g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~----~~~  417 (451)
                      |+..+.||+|+||.||++... .  +..+|+|.+...  .....+.+.+|+.++.++ +||||+++++.....    ...
T Consensus         2 y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~   81 (332)
T cd07857           2 YELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNEL   81 (332)
T ss_pred             ceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcE
Confidence            566789999999999999943 3  778999998643  222346788999999999 599999999876532    356


Q ss_pred             eEEEeccCCCCHHHHHhccC
Q 013018          418 ILVYEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       418 ~lv~ey~~~GsL~~~L~~~~  437 (451)
                      ++++||++ ++|.+++....
T Consensus        82 ~~~~e~~~-~~L~~~l~~~~  100 (332)
T cd07857          82 YLYEELME-ADLHQIIRSGQ  100 (332)
T ss_pred             EEEEeccc-CCHHHHHhcCC
Confidence            78889886 68999987543

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>PRK14879 serine/threonine protein kinase; Provisional

Probab=98.34  E-value=1.7e-06  Score=79.02  Aligned_cols=83  Identities=14%  Similarity=0.255  Sum_probs=68.4

Q ss_pred             ceecccCceeEEEEEcCCCcEEEEEEeccCChh--------hHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEec
Q 013018          352 NKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQ--------GGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  423 (451)
Q Consensus       352 ~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~~~--------~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey  423 (451)
                      +.||+|++|.||+|.. .|..+++|........        ....+.+|+.++..++|+++.....++...+..+++|||
T Consensus         2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~   80 (211)
T PRK14879          2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY   80 (211)
T ss_pred             cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence            5789999999999988 7778999976543211        124688999999999999998888887777788999999


Q ss_pred             cCCCCHHHHHhc
Q 013018          424 VPNKSLDYFLYA  435 (451)
Q Consensus       424 ~~~GsL~~~L~~  435 (451)
                      +++++|.+++..
T Consensus        81 ~~G~~L~~~~~~   92 (211)
T PRK14879         81 IEGEPLKDLINS   92 (211)
T ss_pred             eCCcCHHHHHHh
Confidence            999999999865

>PHA03210 serine/threonine kinase US3; Provisional

Probab=98.32  E-value=7.5e-07  Score=92.50  Aligned_cols=90  Identities=18%  Similarity=0.386  Sum_probs=67.6

Q ss_pred             hccccccceecccCceeEEEEEcCC--CcEEEEE------------------EeccCChhhHHHHHHHHHHHhcCCCCCc
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGVLPS--GQEIAVK------------------RLSRSSGQGGQEFKNEVVLVAKLQHRNL  404 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~l~~--g~~vavK------------------~l~~~~~~~~~~~~~E~~~l~~l~h~ni  404 (451)
                      .++|...++||+|+||.||++..+.  +...++|                  .+. ........+.+|+.+|.+++||||
T Consensus       147 ~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-~~~~~~~~~~~Ei~il~~l~HpnI  225 (501)
T PHA03210        147 LAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVK-AGSRAAIQLENEILALGRLNHENI  225 (501)
T ss_pred             hhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhh-cchHHHHHHHHHHHHHHhCCCCCc
Confidence            4578899999999999999987422  1112222                  111 112233568899999999999999


Q ss_pred             ccceeEEEeCceeeEEEeccCCCCHHHHHhcc
Q 013018          405 VRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQ  436 (451)
Q Consensus       405 v~l~g~~~~~~~~~lv~ey~~~GsL~~~L~~~  436 (451)
                      +++++++...+..++++|++. ++|.+++...
T Consensus       226 v~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~  256 (501)
T PHA03210        226 LKIEEILRSEANTYMITQKYD-FDLYSFMYDE  256 (501)
T ss_pred             CcEeEEEEECCeeEEEEeccc-cCHHHHHhhc
Confidence            999999999999999999984 5888888753

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=98.31  E-value=2e-07  Score=100.33  Aligned_cols=72  Identities=33%  Similarity=0.476  Sum_probs=59.0

Q ss_pred             hccccccceecccCceeEEEEE-cCCCcEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCce
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSS-GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEE  416 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~  416 (451)
                      ..+|.....||+|+||.|||++ .=+|+.+|||++.... .+.-....+|+.++++|+|||||+++....+...
T Consensus       478 ~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~  551 (1351)
T KOG1035|consen  478 LNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTA  551 (1351)
T ss_pred             hhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCC
Confidence            3467788999999999999999 2389999999998664 2334678999999999999999999877665443

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=98.28  E-value=2.1e-06  Score=77.57  Aligned_cols=82  Identities=17%  Similarity=0.287  Sum_probs=65.2

Q ss_pred             eecccCceeEEEEEcCCCcEEEEEEeccCCh---h-----hHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEecc
Q 013018          353 KLGEGGFGEVYKGVLPSGQEIAVKRLSRSSG---Q-----GGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFV  424 (451)
Q Consensus       353 ~lG~G~fg~V~~~~l~~g~~vavK~l~~~~~---~-----~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~  424 (451)
                      .||+|+||.||+|.+ ++..+++|.......   +     ....+.+|+.++..++|+++.....+....+..+++|||+
T Consensus         1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~   79 (199)
T TIGR03724         1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI   79 (199)
T ss_pred             CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence            479999999999996 678899998654311   1     1256789999999999988776666666677789999999


Q ss_pred             CCCCHHHHHhc
Q 013018          425 PNKSLDYFLYA  435 (451)
Q Consensus       425 ~~GsL~~~L~~  435 (451)
                      ++++|.+++..
T Consensus        80 ~g~~l~~~~~~   90 (199)
T TIGR03724        80 EGKPLKDVIEE   90 (199)
T ss_pred             CCccHHHHHhh
Confidence            99999998765

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=98.28  E-value=2.4e-07  Score=89.68  Aligned_cols=94  Identities=24%  Similarity=0.390  Sum_probs=75.7

Q ss_pred             hccccccceecccCceeEEEEE-cCCCcEEEEEEeccC--Chhh-----HHHHHHHHHHHhcCCCCCcccceeEEE-eCc
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRS--SGQG-----GQEFKNEVVLVAKLQHRNLVRLLGFCL-EGE  415 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~--~~~~-----~~~~~~E~~~l~~l~h~niv~l~g~~~-~~~  415 (451)
                      .++|-.++.||+|+|+.|||+. +...+.||||+-...  ..++     .+...+|-.+-+.|.||-||+++.+.. +.+
T Consensus       462 n~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtd  541 (775)
T KOG1151|consen  462 NDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTD  541 (775)
T ss_pred             HHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccc
Confidence            3456678899999999999998 777889999976432  1111     134678999999999999999999875 466


Q ss_pred             eeeEEEeccCCCCHHHHHhccCC
Q 013018          416 EKILVYEFVPNKSLDYFLYAQSP  438 (451)
Q Consensus       416 ~~~lv~ey~~~GsL~~~L~~~~~  438 (451)
                      ..+-|+||+++.+|+-||+.++.
T Consensus       542 sFCTVLEYceGNDLDFYLKQhkl  564 (775)
T KOG1151|consen  542 SFCTVLEYCEGNDLDFYLKQHKL  564 (775)
T ss_pred             cceeeeeecCCCchhHHHHhhhh
Confidence            78899999999999999997653

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=98.27  E-value=1.5e-06  Score=78.05  Aligned_cols=81  Identities=17%  Similarity=0.166  Sum_probs=57.8

Q ss_pred             cceecccCceeEEEEEcCCCcEEEEEEeccCCh--hh-------HHH-----------------HHHHHHHHhcCCCCCc
Q 013018          351 DNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSG--QG-------GQE-----------------FKNEVVLVAKLQHRNL  404 (451)
Q Consensus       351 ~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~~--~~-------~~~-----------------~~~E~~~l~~l~h~ni  404 (451)
                      ...||+|+||.||+|..++|+.||||.++....  ..       ...                 ..+|+..+.++.|+++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v   81 (190)
T cd05147           2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI   81 (190)
T ss_pred             CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence            468999999999999987899999999965421  01       012                 2349999999988776


Q ss_pred             ccceeEEEeCceeeEEEeccCCCCHHHHH
Q 013018          405 VRLLGFCLEGEEKILVYEFVPNKSLDYFL  433 (451)
Q Consensus       405 v~l~g~~~~~~~~~lv~ey~~~GsL~~~L  433 (451)
                      .......  ....+|||||+++++|...+
T Consensus        82 ~~p~~~~--~~~~~iVmE~i~g~~l~~~~  108 (190)
T cd05147          82 PCPEPIL--LKSHVLVMEFIGDDGWAAPR  108 (190)
T ss_pred             CCCcEEE--ecCCEEEEEEeCCCCCcchh
Confidence            4433322  22348999999988776553

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=98.26  E-value=1e-06  Score=88.18  Aligned_cols=92  Identities=23%  Similarity=0.344  Sum_probs=73.4

Q ss_pred             ccccccceecccCceeEEEEEc-CCCcEEEEEEeccCChh--------hHHHHHHHHHHHhcCC---CCCcccceeEEEe
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSGQ--------GGQEFKNEVVLVAKLQ---HRNLVRLLGFCLE  413 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~~~--------~~~~~~~E~~~l~~l~---h~niv~l~g~~~~  413 (451)
                      ..|+....+|+|+||.|+.+.. ++..+|+||.+.+..--        .....-.|+.+|..+.   |+||++++.++..
T Consensus       561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd  640 (772)
T KOG1152|consen  561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED  640 (772)
T ss_pred             ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec
Confidence            3478889999999999999995 45678999998654211        1123557999999996   9999999999999


Q ss_pred             CceeeEEEecc-CCCCHHHHHhccC
Q 013018          414 GEEKILVYEFV-PNKSLDYFLYAQS  437 (451)
Q Consensus       414 ~~~~~lv~ey~-~~GsL~~~L~~~~  437 (451)
                      ++..||++|-. ++-+|.+||..+.
T Consensus       641 dd~yyl~te~hg~gIDLFd~IE~kp  665 (772)
T KOG1152|consen  641 DDYYYLETEVHGEGIDLFDFIEFKP  665 (772)
T ss_pred             CCeeEEEecCCCCCcchhhhhhccC
Confidence            99999999975 4668888887644

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=98.25  E-value=2.9e-07  Score=83.79  Aligned_cols=87  Identities=28%  Similarity=0.390  Sum_probs=70.8

Q ss_pred             ccccccceecccCceeEEEEE-cCCCcEEEEEEeccCCh-hhHHHHHHHHHHHhcC-CCCCcccceeEEEeCceeeEEEe
Q 013018          346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSG-QGGQEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKILVYE  422 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e  422 (451)
                      ++++.+..||.|+||.|+|-. .+.|+.+|||+++.... .+...++.|.+...+- ..||||+++|.+...+..||-||
T Consensus        64 ~~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCME  143 (361)
T KOG1006|consen   64 DNLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICME  143 (361)
T ss_pred             chHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHH
Confidence            345557789999999999998 56799999999986643 4456788888776665 68999999999999999999999


Q ss_pred             ccCCCCHHHHH
Q 013018          423 FVPNKSLDYFL  433 (451)
Q Consensus       423 y~~~GsL~~~L  433 (451)
                      .|.- ||+.+-
T Consensus       144 LMd~-SlDklY  153 (361)
T KOG1006|consen  144 LMDI-SLDKLY  153 (361)
T ss_pred             HHhh-hHHHHH
Confidence            9954 665543

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=98.23  E-value=1.4e-06  Score=86.82  Aligned_cols=99  Identities=21%  Similarity=0.378  Sum_probs=82.2

Q ss_pred             ccccccceecccCceeEEEEEcCCCcEEEEEEecc--CChhhHHHHHHHHHHHhcC-CCCCcccceeEEEeCceeeEEEe
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSR--SSGQGGQEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKILVYE  422 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l~~g~~vavK~l~~--~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e  422 (451)
                      ..|+..++||+|+-..||+....+.+.+|+|++..  ...+....|.+|+..|.+| .|.+|++|+.+-..++.+|||||
T Consensus       361 ~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE  440 (677)
T KOG0596|consen  361 REYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVME  440 (677)
T ss_pred             chhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEee
Confidence            34677899999999999999988888889888754  3455678899999999999 59999999999999999999999


Q ss_pred             ccCCCCHHHHHhccCCCCCCchhh
Q 013018          423 FVPNKSLDYFLYAQSPKNNNNWIG  446 (451)
Q Consensus       423 y~~~GsL~~~L~~~~~~~~l~W~~  446 (451)
                      |= .-+|..+|+.... ...+|-.
T Consensus       441 ~G-d~DL~kiL~k~~~-~~~~~~l  462 (677)
T KOG0596|consen  441 CG-DIDLNKILKKKKS-IDPDWFL  462 (677)
T ss_pred             cc-cccHHHHHHhccC-CCchHHH
Confidence            75 5599999997543 4455533

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=98.21  E-value=4.1e-06  Score=77.92  Aligned_cols=76  Identities=20%  Similarity=0.194  Sum_probs=62.8

Q ss_pred             cCceeEEEEE-cCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEeccCCCCHHHHHhc
Q 013018          357 GGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYA  435 (451)
Q Consensus       357 G~fg~V~~~~-l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~~~GsL~~~L~~  435 (451)
                      |.||.||++. ..+++.+++|.+....     .+.+|...+....|||++++.+.+...+..++++||+++|+|.+++..
T Consensus         4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~   78 (237)
T cd05576           4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK   78 (237)
T ss_pred             cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence            7899999998 5678999999996543     234455555566799999999999988999999999999999999976


Q ss_pred             cC
Q 013018          436 QS  437 (451)
Q Consensus       436 ~~  437 (451)
                      ..
T Consensus        79 ~~   80 (237)
T cd05576          79 FL   80 (237)
T ss_pred             hc
Confidence            43

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=98.21  E-value=4.2e-06  Score=76.88  Aligned_cols=89  Identities=15%  Similarity=0.136  Sum_probs=70.7

Q ss_pred             hhccccccceecccCceeEEEEEcCCCcEEEEEEeccCChhhH---HH------HHHHHHHHhcCCCCCcccceeEEEeC
Q 013018          344 ATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGG---QE------FKNEVVLVAKLQHRNLVRLLGFCLEG  414 (451)
Q Consensus       344 ~~~~~~~~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~~~~~---~~------~~~E~~~l~~l~h~niv~l~g~~~~~  414 (451)
                      -..+|...++||+|+||.||.... ++..++||.+.+......   +.      +.+|+..+.+++|++|..+..+....
T Consensus        29 l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~  107 (232)
T PRK10359         29 LSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLA  107 (232)
T ss_pred             hhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeec
Confidence            456789999999999999999766 567899999975432222   22      68999999999999999998774432


Q ss_pred             --------ceeeEEEeccCCCCHHHHH
Q 013018          415 --------EEKILVYEFVPNKSLDYFL  433 (451)
Q Consensus       415 --------~~~~lv~ey~~~GsL~~~L  433 (451)
                              ...+|+|||+++.+|.++.
T Consensus       108 ~~~~~~~~~~~~lvmEyi~G~tL~~~~  134 (232)
T PRK10359        108 ERKTLRYAHTYIMLIEYIEGVELNDMP  134 (232)
T ss_pred             ccccccccCCeEEEEEEECCccHHHhh
Confidence                    3578999999999998874

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=98.19  E-value=4.4e-06  Score=87.50  Aligned_cols=87  Identities=18%  Similarity=0.274  Sum_probs=66.7

Q ss_pred             cccccceecccCceeEEEEEcCCCcEEEEEEe-ccC-C------hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceee
Q 013018          347 NFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRL-SRS-S------GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKI  418 (451)
Q Consensus       347 ~~~~~~~lG~G~fg~V~~~~l~~g~~vavK~l-~~~-~------~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~  418 (451)
                      .+...+.||+|+||.||++.+.... +++|+. ... .      ....+.+.+|++++.+++|++++....+.......+
T Consensus       334 ~~~~~~~iG~G~~g~Vy~~~~~~~~-~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~  412 (535)
T PRK09605        334 RKIPDHLIGKGAEADIKKGEYLGRD-AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEKT  412 (535)
T ss_pred             ccCccceeccCCcEEEEEEeecCcc-ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCCE
Confidence            3456789999999999999974443 444432 211 1      012356889999999999999998887777777889


Q ss_pred             EEEeccCCCCHHHHHh
Q 013018          419 LVYEFVPNKSLDYFLY  434 (451)
Q Consensus       419 lv~ey~~~GsL~~~L~  434 (451)
                      +||||+++++|.+++.
T Consensus       413 lv~E~~~g~~L~~~l~  428 (535)
T PRK09605        413 IVMEYIGGKDLKDVLE  428 (535)
T ss_pred             EEEEecCCCcHHHHHH
Confidence            9999999999999885

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.14  E-value=8.6e-07  Score=82.88  Aligned_cols=93  Identities=20%  Similarity=0.221  Sum_probs=77.5

Q ss_pred             hccccccceecccCceeEEEEE-cCCCcEEEEEEeccCC---hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEE
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSS---GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILV  420 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv  420 (451)
                      .++|...++||+|.||+|...+ ...++..|+|++++.-   ..+...=+.|-++|.+.+||-+..|.-.+...+.++.|
T Consensus       167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFV  246 (516)
T KOG0690|consen  167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFV  246 (516)
T ss_pred             cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEE
Confidence            4567778999999999999888 5678999999997652   33345567899999999999999998777788999999


Q ss_pred             EeccCCCCHHHHHhccC
Q 013018          421 YEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       421 ~ey~~~GsL~~~L~~~~  437 (451)
                      |||..+|.|.-+|.+.+
T Consensus       247 MeyanGGeLf~HLsrer  263 (516)
T KOG0690|consen  247 MEYANGGELFFHLSRER  263 (516)
T ss_pred             EEEccCceEeeehhhhh
Confidence            99999999988777543

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=98.12  E-value=7.6e-07  Score=79.43  Aligned_cols=84  Identities=23%  Similarity=0.530  Sum_probs=70.1

Q ss_pred             hccccccceecccCceeEEEEE-cCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCC-CCCcccceeEEEeCc--eeeEE
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQ-HRNLVRLLGFCLEGE--EKILV  420 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~--~~~lv  420 (451)
                      .++|+..+++|+|.++.|+.|. ..+.+.++||++++-   ..+.+.+|+.+|.+|+ ||||++|+....++.  ...||
T Consensus        37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV---kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLi  113 (338)
T KOG0668|consen   37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV---KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLI  113 (338)
T ss_pred             cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechH---HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhH
Confidence            3457778999999999999999 678899999999754   2367899999999997 999999999987654  45699


Q ss_pred             EeccCCCCHHH
Q 013018          421 YEFVPNKSLDY  431 (451)
Q Consensus       421 ~ey~~~GsL~~  431 (451)
                      +||..+-+...
T Consensus       114 FE~v~n~Dfk~  124 (338)
T KOG0668|consen  114 FEYVNNTDFKQ  124 (338)
T ss_pred             hhhhccccHHH
Confidence            99998877543

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=98.11  E-value=9.9e-06  Score=72.81  Aligned_cols=79  Identities=20%  Similarity=0.207  Sum_probs=58.5

Q ss_pred             cceecccCceeEEEEEcCCCcEEEEEEeccCChh---------------------h-----HHHHHHHHHHHhcCCCCCc
Q 013018          351 DNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQ---------------------G-----GQEFKNEVVLVAKLQHRNL  404 (451)
Q Consensus       351 ~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~~~---------------------~-----~~~~~~E~~~l~~l~h~ni  404 (451)
                      ...||+|+||.||++...+|+.||||.++.....                     .     ...+.+|...+.++.|+++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i   81 (190)
T cd05145           2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV   81 (190)
T ss_pred             CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            4689999999999999778999999998754211                     0     1224578999999999987


Q ss_pred             ccceeEEEeCceeeEEEeccCCCCHHH
Q 013018          405 VRLLGFCLEGEEKILVYEFVPNKSLDY  431 (451)
Q Consensus       405 v~l~g~~~~~~~~~lv~ey~~~GsL~~  431 (451)
                      .....+...  ..+|||||++++++..
T Consensus        82 ~~p~~~~~~--~~~lVmE~~~g~~~~~  106 (190)
T cd05145          82 PVPEPILLK--KNVLVMEFIGDDGSPA  106 (190)
T ss_pred             CCceEEEec--CCEEEEEEecCCCchh
Confidence            655444332  3489999999886543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=98.04  E-value=9.4e-08  Score=86.27  Aligned_cols=94  Identities=24%  Similarity=0.417  Sum_probs=71.1

Q ss_pred             ccccceecccCceeEEEEEc-CCCcEEEEEEeccCCh--hhHHHHHHHHHHHhcCCCCCcccceeEEEeC--------ce
Q 013018          348 FSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSG--QGGQEFKNEVVLVAKLQHRNLVRLLGFCLEG--------EE  416 (451)
Q Consensus       348 ~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~--------~~  416 (451)
                      +....+||+|.||.||++.- +.|+.||+|++--..+  .-...-++|+.+|..+.|+|++.|+.+|...        ..
T Consensus        19 yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t   98 (376)
T KOG0669|consen   19 YEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRAT   98 (376)
T ss_pred             HHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccce
Confidence            34457899999999999994 4577888876642211  1235678999999999999999999988642        24


Q ss_pred             eeEEEeccCCCCHHHHHhccCCCCCC
Q 013018          417 KILVYEFVPNKSLDYFLYAQSPKNNN  442 (451)
Q Consensus       417 ~~lv~ey~~~GsL~~~L~~~~~~~~l  442 (451)
                      .+||++++++ +|.-.|.+..-+-.+
T Consensus        99 ~ylVf~~ceh-DLaGlLsn~~vr~sl  123 (376)
T KOG0669|consen   99 FYLVFDFCEH-DLAGLLSNRKVRFSL  123 (376)
T ss_pred             eeeeHHHhhh-hHHHHhcCccccccH
Confidence            7999999988 898888875443333

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=97.98  E-value=1.3e-06  Score=79.89  Aligned_cols=86  Identities=26%  Similarity=0.444  Sum_probs=71.1

Q ss_pred             cceecccCceeEEEEEcCCCcEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEeccCCCC
Q 013018          351 DNKLGEGGFGEVYKGVLPSGQEIAVKRLSRS--SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKS  428 (451)
Q Consensus       351 ~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~~~Gs  428 (451)
                      ..+|.+.--|..|+|++ .|..+++|++.-.  .....++|..|...++-+.||||+.++|.|..++++.++..|||.|+
T Consensus       195 ~tkl~e~hsgelwrgrw-qgndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~gs  273 (448)
T KOG0195|consen  195 ITKLAESHSGELWRGRW-QGNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFGS  273 (448)
T ss_pred             hhhhccCCCcccccccc-cCcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccchH
Confidence            45677788899999999 4556666777533  22233689999998988999999999999999999999999999999


Q ss_pred             HHHHHhccC
Q 013018          429 LDYFLYAQS  437 (451)
Q Consensus       429 L~~~L~~~~  437 (451)
                      |...||+..
T Consensus       274 lynvlhe~t  282 (448)
T KOG0195|consen  274 LYNVLHEQT  282 (448)
T ss_pred             HHHHHhcCc
Confidence            999999754

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=97.93  E-value=3e-05  Score=70.10  Aligned_cols=83  Identities=18%  Similarity=0.231  Sum_probs=61.3

Q ss_pred             ccccceecccCceeEEEEEcCCCcEEEEEEeccCCh--h--------------------hHHHHHHHHHHHhcCCCCC--
Q 013018          348 FSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSG--Q--------------------GGQEFKNEVVLVAKLQHRN--  403 (451)
Q Consensus       348 ~~~~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~~--~--------------------~~~~~~~E~~~l~~l~h~n--  403 (451)
                      +...+.||+|+||.||++..++|+.|+||++.....  .                    ....+.+|..++..+.|++  
T Consensus        17 ~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~   96 (198)
T cd05144          17 ESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGFP   96 (198)
T ss_pred             hhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCCC
Confidence            566789999999999999988899999998754320  0                    0123677888898888774  


Q ss_pred             cccceeEEEeCceeeEEEeccCCCCHHHHHh
Q 013018          404 LVRLLGFCLEGEEKILVYEFVPNKSLDYFLY  434 (451)
Q Consensus       404 iv~l~g~~~~~~~~~lv~ey~~~GsL~~~L~  434 (451)
                      +.+.++    ....+++|||+++++|.+.+.
T Consensus        97 v~~~~~----~~~~~lv~e~~~g~~L~~~~~  123 (198)
T cd05144          97 VPKPID----WNRHAVVMEYIDGVELYRVRV  123 (198)
T ss_pred             CCceee----cCCceEEEEEeCCcchhhccc
Confidence            334333    245689999999999877643

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=97.84  E-value=3.2e-05  Score=81.31  Aligned_cols=89  Identities=22%  Similarity=0.348  Sum_probs=59.4

Q ss_pred             hhccccccceecccCceeEEEEEc-CC----CcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeE------EE
Q 013018          344 ATNNFSTDNKLGEGGFGEVYKGVL-PS----GQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGF------CL  412 (451)
Q Consensus       344 ~~~~~~~~~~lG~G~fg~V~~~~l-~~----g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~------~~  412 (451)
                      ..++|...++||+|+||.||+|.. .+    +..||||++......  +.+..|.  +....+.++..++..      +.
T Consensus       130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~--e~~~~e~--l~~~~~~~~~~~~~~~~~~~~~~  205 (566)
T PLN03225        130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAV--EIWMNER--VRRACPNSCADFVYGFLEPVSSK  205 (566)
T ss_pred             ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchh--HHHHHHH--HHhhchhhHHHHHHhhhcccccc
Confidence            456788999999999999999995 34    689999988643321  2222221  122222222222211      23


Q ss_pred             eCceeeEEEeccCCCCHHHHHhcc
Q 013018          413 EGEEKILVYEFVPNKSLDYFLYAQ  436 (451)
Q Consensus       413 ~~~~~~lv~ey~~~GsL~~~L~~~  436 (451)
                      ...+.+||+||+++|+|.++++..
T Consensus       206 ~~~~~~LV~ey~~~gsL~~~l~~~  229 (566)
T PLN03225        206 KEDEYWLVWRYEGESTLADLMQSK  229 (566)
T ss_pred             cCCceEEEEEecCCCcHHHHHHhc
Confidence            456789999999999999999864

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=97.81  E-value=1.4e-05  Score=81.05  Aligned_cols=89  Identities=21%  Similarity=0.284  Sum_probs=74.7

Q ss_pred             cccccceecccCceeEEEEE-cCCCcEEEEEEeccCCh---hhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEe
Q 013018          347 NFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSG---QGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  422 (451)
Q Consensus       347 ~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  422 (451)
                      -|..++.||-|+||+|..+. .+.....|.|.|++...   ........|-.||+...++.||+|+-.+.+.+.+|.|||
T Consensus       630 mFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVMd  709 (1034)
T KOG0608|consen  630 MFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD  709 (1034)
T ss_pred             ceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEEe
Confidence            36778899999999999987 55566789999976533   234567789999999999999999988888899999999


Q ss_pred             ccCCCCHHHHHhc
Q 013018          423 FVPNKSLDYFLYA  435 (451)
Q Consensus       423 y~~~GsL~~~L~~  435 (451)
                      |.++|++-.+|-+
T Consensus       710 YIPGGDmMSLLIr  722 (1034)
T KOG0608|consen  710 YIPGGDMMSLLIR  722 (1034)
T ss_pred             ccCCccHHHHHHH
Confidence            9999999888764

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=97.75  E-value=2.7e-05  Score=75.45  Aligned_cols=92  Identities=23%  Similarity=0.403  Sum_probs=77.7

Q ss_pred             HHhhccccccceecccCceeEEEEEcC----CCcEEEEEEeccCChhhHHHHHHHHHHHhcC-CCCCcccceeEEEeCce
Q 013018          342 EVATNNFSTDNKLGEGGFGEVYKGVLP----SGQEIAVKRLSRSSGQGGQEFKNEVVLVAKL-QHRNLVRLLGFCLEGEE  416 (451)
Q Consensus       342 ~~~~~~~~~~~~lG~G~fg~V~~~~l~----~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~  416 (451)
                      ....+.+...++||+|.|+.||++.+.    ..+.||+|.+...+.  .....+|++.|..+ .|.||+++.++...++.
T Consensus        32 p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~--p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~  109 (418)
T KOG1167|consen   32 PFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSS--PSRILNELEMLYRLGGSDNIIKLNGCFRNNDQ  109 (418)
T ss_pred             hhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccC--chHHHHHHHHHHHhccchhhhcchhhhccCCe
Confidence            334456788999999999999999943    467899999976543  35688999999999 58999999999999999


Q ss_pred             eeEEEeccCCCCHHHHHhc
Q 013018          417 KILVYEFVPNKSLDYFLYA  435 (451)
Q Consensus       417 ~~lv~ey~~~GsL~~~L~~  435 (451)
                      ..+|+||+++-.-.++++.
T Consensus       110 v~ivlp~~~H~~f~~l~~~  128 (418)
T KOG1167|consen  110 VAIVLPYFEHDRFRDLYRS  128 (418)
T ss_pred             eEEEecccCccCHHHHHhc
Confidence            9999999999888888775

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=97.72  E-value=1.6e-05  Score=72.86  Aligned_cols=91  Identities=21%  Similarity=0.373  Sum_probs=74.2

Q ss_pred             ccccccceecccCceeEEEEE-cCCCcEEEEEEeccC----Chhh----HHHHHHHHHHHhcC-CCCCcccceeEEEeCc
Q 013018          346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRS----SGQG----GQEFKNEVVLVAKL-QHRNLVRLLGFCLEGE  415 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~----~~~~----~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~  415 (451)
                      +.+...++||.|..+.|-+.. -+.|.+.|+|++...    +.+.    .++=.+|+.+|+++ .||+|+.|...+.++.
T Consensus        17 ~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~s   96 (411)
T KOG0599|consen   17 AKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDA   96 (411)
T ss_pred             hhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcc
Confidence            446677899999998888877 456888999988633    1112    24456899999998 6999999999999999


Q ss_pred             eeeEEEeccCCCCHHHHHhcc
Q 013018          416 EKILVYEFVPNKSLDYFLYAQ  436 (451)
Q Consensus       416 ~~~lv~ey~~~GsL~~~L~~~  436 (451)
                      -+++|+|.|+.|.|.+||.+.
T Consensus        97 F~FlVFdl~prGELFDyLts~  117 (411)
T KOG0599|consen   97 FVFLVFDLMPRGELFDYLTSK  117 (411)
T ss_pred             hhhhhhhhcccchHHHHhhhh
Confidence            999999999999999999864

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=97.71  E-value=3e-05  Score=68.50  Aligned_cols=95  Identities=23%  Similarity=0.366  Sum_probs=77.7

Q ss_pred             HHHHHhhccccccceecccCceeEEEEE-cCCCcEEEEEEeccC-ChhhHHHHHHHHHHHhcC-CCCCcccceeEEEeCc
Q 013018          339 ETIEVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRS-SGQGGQEFKNEVVLVAKL-QHRNLVRLLGFCLEGE  415 (451)
Q Consensus       339 ~~l~~~~~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~  415 (451)
                      ..++.+.+.+.....||+|++|.|-+-+ ..+|..+|||++... ..+..+..++|+.+..+- ..|.+|+++|......
T Consensus        39 ~~~eV~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~reg  118 (282)
T KOG0984|consen   39 RNFEVPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREG  118 (282)
T ss_pred             CccccchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccc
Confidence            3466777778888999999999998887 568999999999754 445567788999876654 7899999999999999


Q ss_pred             eeeEEEeccCCCCHHHHHh
Q 013018          416 EKILVYEFVPNKSLDYFLY  434 (451)
Q Consensus       416 ~~~lv~ey~~~GsL~~~L~  434 (451)
                      ..||-||.|.. ||+.|-+
T Consensus       119 dvwIcME~M~t-Sldkfy~  136 (282)
T KOG0984|consen  119 DVWICMELMDT-SLDKFYR  136 (282)
T ss_pred             cEEEeHHHhhh-hHHHHHH
Confidence            99999999955 7877655

>smart00090 RIO RIO-like kinase

Probab=97.65  E-value=0.00011  Score=68.57  Aligned_cols=83  Identities=19%  Similarity=0.189  Sum_probs=60.0

Q ss_pred             cccccceecccCceeEEEEE--cCCCcEEEEEEeccCChh------------------------hHHHHHHHHHHHhcCC
Q 013018          347 NFSTDNKLGEGGFGEVYKGV--LPSGQEIAVKRLSRSSGQ------------------------GGQEFKNEVVLVAKLQ  400 (451)
Q Consensus       347 ~~~~~~~lG~G~fg~V~~~~--l~~g~~vavK~l~~~~~~------------------------~~~~~~~E~~~l~~l~  400 (451)
                      .+...+.||+|+||.||+|.  ..+|+.||+|.+......                        ....+.+|+..+.++.
T Consensus        29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~  108 (237)
T smart00090       29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY  108 (237)
T ss_pred             hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            35677899999999999998  678999999998643210                        0123568999999997


Q ss_pred             CCC--cccceeEEEeCceeeEEEeccCCCCHHHHH
Q 013018          401 HRN--LVRLLGFCLEGEEKILVYEFVPNKSLDYFL  433 (451)
Q Consensus       401 h~n--iv~l~g~~~~~~~~~lv~ey~~~GsL~~~L  433 (451)
                      |..  +.+.++.    ...+|||||+++++|..++
T Consensus       109 ~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~  139 (237)
T smart00090      109 EAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPR  139 (237)
T ss_pred             hcCCCCCeeeEe----cCceEEEEEecCCcccccc
Confidence            533  2333332    2358999999998887654

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=97.60  E-value=9.3e-05  Score=62.77  Aligned_cols=79  Identities=18%  Similarity=0.172  Sum_probs=64.4

Q ss_pred             ccceecccCceeEEEEEcCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCC--CCcccceeEEEeCceeeEEEeccCCC
Q 013018          350 TDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH--RNLVRLLGFCLEGEEKILVYEFVPNK  427 (451)
Q Consensus       350 ~~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~g~~~~~~~~~lv~ey~~~G  427 (451)
                      +.+.||+|.++.||++...+ ..+++|.......  ...+.+|+..+..++|  .++.++++.....+..++++||++++
T Consensus         2 ~~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~   78 (155)
T cd05120           2 SIKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGE   78 (155)
T ss_pred             cceecccccccceEEEEecC-CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCe
Confidence            35789999999999999844 7899998865433  4678999999999976  58888888877777899999999988


Q ss_pred             CHHH
Q 013018          428 SLDY  431 (451)
Q Consensus       428 sL~~  431 (451)
                      .+..
T Consensus        79 ~~~~   82 (155)
T cd05120          79 TLDE   82 (155)
T ss_pred             eccc
Confidence            7753

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=97.59  E-value=2e-05  Score=77.01  Aligned_cols=92  Identities=26%  Similarity=0.387  Sum_probs=77.1

Q ss_pred             ccccccceecccCceeEEEEE-cCCCcEEEEEEeccCC---hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEE
Q 013018          346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSS---GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  421 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~  421 (451)
                      +.|..-++||+|+||.|+-.+ ...|...|.|++.+..   .+...--++|-.++.+++.+-||.|--.+.+.+.++||+
T Consensus       185 n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClVL  264 (591)
T KOG0986|consen  185 NTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLVL  264 (591)
T ss_pred             cceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEEE
Confidence            457778899999999999998 4568888999886542   233345789999999999999999988888899999999


Q ss_pred             eccCCCCHHHHHhccC
Q 013018          422 EFVPNKSLDYFLYAQS  437 (451)
Q Consensus       422 ey~~~GsL~~~L~~~~  437 (451)
                      ..|.+|+|.-+|....
T Consensus       265 tlMNGGDLkfHiyn~g  280 (591)
T KOG0986|consen  265 TLMNGGDLKFHIYNHG  280 (591)
T ss_pred             EeecCCceeEEeeccC
Confidence            9999999998888755

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=97.49  E-value=0.00022  Score=64.59  Aligned_cols=87  Identities=24%  Similarity=0.439  Sum_probs=67.7

Q ss_pred             hccccccceecccCceeEEEEE-cCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCC-CCcccceeEEEeCceeeEEEe
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH-RNLVRLLGFCLEGEEKILVYE  422 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~g~~~~~~~~~lv~e  422 (451)
                      ...|...++||.|+||.+|.|. +.+|++||||.=.....  ...+..|..+...|+| ..|..+.-+..+.+.-.||||
T Consensus        14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~--hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMd   91 (341)
T KOG1163|consen   14 GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAK--HPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMD   91 (341)
T ss_pred             ccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCC--CcchhHHHHHHHHhccCCCCchhhhhccccccceeeee
Confidence            3468889999999999999999 78999999997543322  2467788888888875 456666666667777889999


Q ss_pred             ccCCCCHHHHHh
Q 013018          423 FVPNKSLDYFLY  434 (451)
Q Consensus       423 y~~~GsL~~~L~  434 (451)
                      .+ +-+|+++..
T Consensus        92 LL-GPsLEdLfn  102 (341)
T KOG1163|consen   92 LL-GPSLEDLFN  102 (341)
T ss_pred             cc-CccHHHHHH
Confidence            88 668888765

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=97.49  E-value=5e-05  Score=70.67  Aligned_cols=89  Identities=22%  Similarity=0.228  Sum_probs=69.5

Q ss_pred             hccccc-cceecccCceeEEEEE-cCCCcEEEEEEeccCChhhHHHHHHHHHHHhcC-CCCCcccceeEEEe----Ccee
Q 013018          345 TNNFST-DNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKL-QHRNLVRLLGFCLE----GEEK  417 (451)
Q Consensus       345 ~~~~~~-~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~----~~~~  417 (451)
                      +++|++ ..+||-|--|.|.... ...++..|+|.|...     ...++|+++-... .|||||+++.++..    ..-+
T Consensus        60 tedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-----~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcL  134 (400)
T KOG0604|consen   60 TEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS-----PKARREVELHWMASGHPHIVSIIDVYENSYQGRKCL  134 (400)
T ss_pred             hhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC-----HHHHhHhhhhhhhcCCCceEEeehhhhhhccCceee
Confidence            334443 3689999999999888 557889999988643     3557888876665 69999999988754    3467


Q ss_pred             eEEEeccCCCCHHHHHhccCC
Q 013018          418 ILVYEFVPNKSLDYFLYAQSP  438 (451)
Q Consensus       418 ~lv~ey~~~GsL~~~L~~~~~  438 (451)
                      ++|||.|++|.|..-+.+++.
T Consensus       135 LiVmE~meGGeLfsriq~~g~  155 (400)
T KOG0604|consen  135 LIVMECMEGGELFSRIQDRGD  155 (400)
T ss_pred             EeeeecccchHHHHHHHHccc
Confidence            899999999999999987654

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=97.48  E-value=6.5e-05  Score=78.61  Aligned_cols=84  Identities=29%  Similarity=0.394  Sum_probs=69.0

Q ss_pred             ccccceecccCcee-EEEEEcCCCcEEEEEEeccCChhhHHHHHHHHHHHhcC-CCCCcccceeEEEeCceeeEEEeccC
Q 013018          348 FSTDNKLGEGGFGE-VYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKILVYEFVP  425 (451)
Q Consensus       348 ~~~~~~lG~G~fg~-V~~~~l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lv~ey~~  425 (451)
                      |...+++|.|+-|+ ||+|.+ .|++||||++-...   ..-..+|+..+..- .|||||++++.-..+...||..|.|.
T Consensus       511 ~~~~eilG~Gs~Gt~Vf~G~y-e~R~VAVKrll~e~---~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~  586 (903)
T KOG1027|consen  511 FSPKEILGYGSNGTVVFRGVY-EGREVAVKRLLEEF---FDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCA  586 (903)
T ss_pred             eccHHHcccCCCCcEEEEEee-CCceehHHHHhhHh---HHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhh
Confidence            45567899999887 899999 78899999885432   23456899988877 69999999888888889999999995


Q ss_pred             CCCHHHHHhcc
Q 013018          426 NKSLDYFLYAQ  436 (451)
Q Consensus       426 ~GsL~~~L~~~  436 (451)
                       -+|.+++...
T Consensus       587 -~sL~dlie~~  596 (903)
T KOG1027|consen  587 -CSLQDLIESS  596 (903)
T ss_pred             -hhHHHHHhcc
Confidence             4999999874

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=97.45  E-value=3.8e-05  Score=74.22  Aligned_cols=92  Identities=22%  Similarity=0.226  Sum_probs=71.5

Q ss_pred             hccccccceecccCceeEEEEEcC-CCcEEEEEEeccCC---hhhHHHHHHHHHHHhcC-CCCCcccceeEEEeCceeeE
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSRSS---GQGGQEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKIL  419 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~l~-~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~l  419 (451)
                      ..+|....+||+|+||.|..+..+ ..+..|||+|+..-   ..+.+-=+.|-++|+-. +-|-+++|..+....+.++.
T Consensus       348 ~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyF  427 (683)
T KOG0696|consen  348 ATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYF  427 (683)
T ss_pred             ecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheee
Confidence            345788899999999999999854 45778999997652   22233345666777665 46788899888888899999


Q ss_pred             EEeccCCCCHHHHHhcc
Q 013018          420 VYEFVPNKSLDYFLYAQ  436 (451)
Q Consensus       420 v~ey~~~GsL~~~L~~~  436 (451)
                      ||||+.+|+|--.++.-
T Consensus       428 VMEyvnGGDLMyhiQQ~  444 (683)
T KOG0696|consen  428 VMEYVNGGDLMYHIQQV  444 (683)
T ss_pred             EEEEecCchhhhHHHHh
Confidence            99999999998777753

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=97.44  E-value=0.0002  Score=72.92  Aligned_cols=85  Identities=19%  Similarity=0.260  Sum_probs=58.0

Q ss_pred             cceecccCceeEEEEEcCCCcEEEEEEeccCChhhH----------------------------------------HHHH
Q 013018          351 DNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGG----------------------------------------QEFK  390 (451)
Q Consensus       351 ~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~~~~~----------------------------------------~~~~  390 (451)
                      .+.||.|++|+||+|++++|+.||||+.++...+..                                        -+|.
T Consensus       122 ~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~  201 (437)
T TIGR01982       122 EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR  201 (437)
T ss_pred             CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence            367999999999999999999999999865421110                                        0245


Q ss_pred             HHHHHHhcC----CCCCcccceeEEEe-CceeeEEEeccCCCCHHHHHhc
Q 013018          391 NEVVLVAKL----QHRNLVRLLGFCLE-GEEKILVYEFVPNKSLDYFLYA  435 (451)
Q Consensus       391 ~E~~~l~~l----~h~niv~l~g~~~~-~~~~~lv~ey~~~GsL~~~L~~  435 (451)
                      +|+..+.++    +|.+-+..-.++.. ....+|||||+++++|.+++..
T Consensus       202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~  251 (437)
T TIGR01982       202 REAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAAL  251 (437)
T ss_pred             HHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHH
Confidence            566655554    23333333333332 3457899999999999888764

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>PHA02882 putative serine/threonine kinase; Provisional

Probab=97.40  E-value=0.00076  Score=64.85  Aligned_cols=90  Identities=14%  Similarity=0.153  Sum_probs=58.2

Q ss_pred             hccccccceecccCceeEEEEEcCC----CcEEEEEEeccCChhhH-----------HHHHHHHHHHhcCCCCCccccee
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGVLPS----GQEIAVKRLSRSSGQGG-----------QEFKNEVVLVAKLQHRNLVRLLG  409 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~l~~----g~~vavK~l~~~~~~~~-----------~~~~~E~~~l~~l~h~niv~l~g  409 (451)
                      .++|...++||+|+||.||++...+    +..+++|..........           .....+...+..++|+|++++++
T Consensus        11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~   90 (294)
T PHA02882         11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYG   90 (294)
T ss_pred             CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEE
Confidence            3568888999999999999999543    34566665432221110           11233445566778999999999


Q ss_pred             EEEeCc----eeeEEEeccCCCCHHHHHhc
Q 013018          410 FCLEGE----EKILVYEFVPNKSLDYFLYA  435 (451)
Q Consensus       410 ~~~~~~----~~~lv~ey~~~GsL~~~L~~  435 (451)
                      ++....    ..++++|++.. ++.+.+..
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  119 (294)
T PHA02882         91 CGSFKRCRMYYRFILLEKLVE-NTKEIFKR  119 (294)
T ss_pred             eeeEecCCceEEEEEEehhcc-CHHHHHHh
Confidence            766543    34677887643 66666554

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=97.33  E-value=8e-05  Score=70.15  Aligned_cols=94  Identities=18%  Similarity=0.223  Sum_probs=74.1

Q ss_pred             hhccccccceecccCceeEEEEEc-CCCcEEEEEEeccC---ChhhHHHHHHHHHHHhcC-CCCCcccceeEEEeCceee
Q 013018          344 ATNNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRS---SGQGGQEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKI  418 (451)
Q Consensus       344 ~~~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~  418 (451)
                      ..++|...++||+|+|.+|..+.+ +..+..|+|++++.   ..++......|-.++.+. +||-+|.|..++.....++
T Consensus       248 ~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlf  327 (593)
T KOG0695|consen  248 GLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLF  327 (593)
T ss_pred             ccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEE
Confidence            445688899999999999999985 56788899988754   223334456676777666 6999999999888888999


Q ss_pred             EEEeccCCCCHHHHHhccC
Q 013018          419 LVYEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       419 lv~ey~~~GsL~~~L~~~~  437 (451)
                      .|.||+++|+|--+++..+
T Consensus       328 fvieyv~ggdlmfhmqrqr  346 (593)
T KOG0695|consen  328 FVIEYVNGGDLMFHMQRQR  346 (593)
T ss_pred             EEEEEecCcceeeehhhhh
Confidence            9999999999976666544

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=97.26  E-value=0.00012  Score=67.29  Aligned_cols=87  Identities=21%  Similarity=0.376  Sum_probs=69.3

Q ss_pred             ccccceecccCceeEEEEE-cCCCcEEEEEEeccCC-hhhHHHHHHHHHHHhcCC-CCCcccceeEEEeCceeeEEEecc
Q 013018          348 FSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSS-GQGGQEFKNEVVLVAKLQ-HRNLVRLLGFCLEGEEKILVYEFV  424 (451)
Q Consensus       348 ~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~lv~ey~  424 (451)
                      ++....||.|..|.|++.. .+.|..+|||.+.+.. .++.+.++..+.++.+-+ .|.||+.+|++..+..++|-||.|
T Consensus        94 l~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelM  173 (391)
T KOG0983|consen   94 LENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELM  173 (391)
T ss_pred             hhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHH
Confidence            3446789999999999999 4568999999998764 445577888888877665 899999999999999999999988


Q ss_pred             CCCCHHHHHhc
Q 013018          425 PNKSLDYFLYA  435 (451)
Q Consensus       425 ~~GsL~~~L~~  435 (451)
                      .. .++.+|+.
T Consensus       174 s~-C~ekLlkr  183 (391)
T KOG0983|consen  174 ST-CAEKLLKR  183 (391)
T ss_pred             HH-HHHHHHHH
Confidence            43 44555543

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=97.22  E-value=3.6e-05  Score=70.58  Aligned_cols=88  Identities=20%  Similarity=0.389  Sum_probs=67.4

Q ss_pred             cccceecccCceeEEEEE-cCCCcEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeC-----ceeeEE
Q 013018          349 STDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRS--SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEG-----EEKILV  420 (451)
Q Consensus       349 ~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-----~~~~lv  420 (451)
                      +..+.||-|+||.||... -++|+.|+.|++..-  +-...+.+.+|++++.-++|.|+++++......     .++|++
T Consensus        56 ~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~  135 (449)
T KOG0664|consen   56 QPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVL  135 (449)
T ss_pred             CCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHH
Confidence            446789999999999988 567999999988542  122336789999999999999999999876543     367888


Q ss_pred             EeccCCCCHHHHHhccC
Q 013018          421 YEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       421 ~ey~~~GsL~~~L~~~~  437 (451)
                      +|.|. .+|+..|-...
T Consensus       136 TELmQ-SDLHKIIVSPQ  151 (449)
T KOG0664|consen  136 TELMQ-SDLHKIIVSPQ  151 (449)
T ss_pred             HHHHH-hhhhheeccCC
Confidence            88884 47776665433

>PRK12274 serine/threonine protein kinase; Provisional

Probab=97.18  E-value=0.0015  Score=59.14  Aligned_cols=79  Identities=14%  Similarity=0.108  Sum_probs=59.7

Q ss_pred             ccceecccCceeEEEEEcCCCcEEEEEEeccCChhh----HHHHHHHHHHHhcCC-CCCcccceeEEEeCceeeEEEecc
Q 013018          350 TDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQG----GQEFKNEVVLVAKLQ-HRNLVRLLGFCLEGEEKILVYEFV  424 (451)
Q Consensus       350 ~~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~~~~----~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~lv~ey~  424 (451)
                      ....|++|.||+|+...- .+..++.+.+.....-.    ..-|.+|+++|.+|+ |+++.+++++    +..+++|||+
T Consensus         6 ~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI   80 (218)
T PRK12274          6 VNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSYL   80 (218)
T ss_pred             cceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEeee
Confidence            457899999999996665 67778777775443211    124789999999995 5889888875    3468999999


Q ss_pred             CCCCHHHHH
Q 013018          425 PNKSLDYFL  433 (451)
Q Consensus       425 ~~GsL~~~L  433 (451)
                      ++.+|.+.+
T Consensus        81 ~G~~L~~~~   89 (218)
T PRK12274         81 AGAAMYQRP   89 (218)
T ss_pred             cCccHHhhh
Confidence            999987654

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=97.16  E-value=0.00079  Score=66.75  Aligned_cols=89  Identities=19%  Similarity=0.328  Sum_probs=71.0

Q ss_pred             ccccccceecccCceeEEEEE-cCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCC-----C---CCcccceeEEEe---
Q 013018          346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQ-----H---RNLVRLLGFCLE---  413 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-----h---~niv~l~g~~~~---  413 (451)
                      .+|...++||=|-|++||.+. ..+.+.||+|+.+.. ..-.+.-+.||++|++++     |   .+||+|+..+..   
T Consensus        78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA-qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGp  156 (590)
T KOG1290|consen   78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA-QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGP  156 (590)
T ss_pred             ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh-hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCC
Confidence            568889999999999999998 667889999988654 233467889999999883     3   369999988754   


Q ss_pred             -CceeeEEEeccCCCCHHHHHhcc
Q 013018          414 -GEEKILVYEFVPNKSLDYFLYAQ  436 (451)
Q Consensus       414 -~~~~~lv~ey~~~GsL~~~L~~~  436 (451)
                       +.+++||+|++ +-+|..+|...
T Consensus       157 NG~HVCMVfEvL-GdnLLklI~~s  179 (590)
T KOG1290|consen  157 NGQHVCMVFEVL-GDNLLKLIKYS  179 (590)
T ss_pred             CCcEEEEEehhh-hhHHHHHHHHh
Confidence             45899999998 45788777753

>cd05119 RIO RIO kinase family, catalytic domain

Probab=97.12  E-value=0.0012  Score=58.66  Aligned_cols=74  Identities=19%  Similarity=0.361  Sum_probs=48.1

Q ss_pred             cceecccCceeEEEEEcCCCcEEEEEEeccCChh--hHHHH----------------------HHHHHHHhcCCCCC--c
Q 013018          351 DNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQ--GGQEF----------------------KNEVVLVAKLQHRN--L  404 (451)
Q Consensus       351 ~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~~~--~~~~~----------------------~~E~~~l~~l~h~n--i  404 (451)
                      .+.||+|+||.||++...+++.||||.+......  ....+                      ..|...+.++.+..  +
T Consensus         2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~   81 (187)
T cd05119           2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV   81 (187)
T ss_pred             CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence            4679999999999999878999999988653211  11111                      34555555554332  3


Q ss_pred             ccceeEEEeCceeeEEEeccCCCC
Q 013018          405 VRLLGFCLEGEEKILVYEFVPNKS  428 (451)
Q Consensus       405 v~l~g~~~~~~~~~lv~ey~~~Gs  428 (451)
                      .+.++.    ...++++||++++.
T Consensus        82 ~~~~~~----~~~~lv~e~~~g~~  101 (187)
T cd05119          82 PKPIDL----NRHVLVMEFIGGDG  101 (187)
T ss_pred             CceEec----CCCEEEEEEeCCCC
Confidence            333322    34689999999843

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=97.08  E-value=0.0013  Score=68.15  Aligned_cols=87  Identities=16%  Similarity=0.214  Sum_probs=58.2

Q ss_pred             hccccccceecccCceeEEEEEcCC-CcEEEEEEeccCChhh----------------------------------H---
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSRSSGQG----------------------------------G---  386 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~l~~-g~~vavK~l~~~~~~~----------------------------------~---  386 (451)
                      ...|.. +.||.|++|+||++.+++ |+.||||.+++.-.+.                                  .   
T Consensus       119 F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l  197 (537)
T PRK04750        119 FDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTL  197 (537)
T ss_pred             HHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHH
Confidence            344554 789999999999999877 9999999997542110                                  0   


Q ss_pred             ---HHHHHHHHHHhcCC----CCCcccceeEEEe-CceeeEEEeccCCCCHHHH
Q 013018          387 ---QEFKNEVVLVAKLQ----HRNLVRLLGFCLE-GEEKILVYEFVPNKSLDYF  432 (451)
Q Consensus       387 ---~~~~~E~~~l~~l~----h~niv~l~g~~~~-~~~~~lv~ey~~~GsL~~~  432 (451)
                         -+|.+|+..+.+++    +.+.+.+-.++++ .....|||||++++.|.++
T Consensus       198 ~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~  251 (537)
T PRK04750        198 HDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDV  251 (537)
T ss_pred             HHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhH
Confidence               12445555555442    4444443334433 3467899999999999875

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=97.07  E-value=0.00032  Score=67.42  Aligned_cols=91  Identities=22%  Similarity=0.287  Sum_probs=71.2

Q ss_pred             hccccccceecccCceeEEEEE-cCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCC--CC----cccceeEEEeCcee
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH--RN----LVRLLGFCLEGEEK  417 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h--~n----iv~l~g~~~~~~~~  417 (451)
                      +++|.....+|+|.||.|-+.. ...+..||||+++.- ..-.+.-+-|++++.++.+  |+    +|.+.+++.-.++.
T Consensus        88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V-~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghi  166 (415)
T KOG0671|consen   88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNV-DKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHI  166 (415)
T ss_pred             ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHH-HHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCce
Confidence            5678889999999999999988 445789999988643 2334667889999999832  22    55666777778899


Q ss_pred             eEEEeccCCCCHHHHHhccC
Q 013018          418 ILVYEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       418 ~lv~ey~~~GsL~~~L~~~~  437 (451)
                      +||+|.+ +-|+.+||+.+.
T Consensus       167 Civfell-G~S~~dFlk~N~  185 (415)
T KOG0671|consen  167 CIVFELL-GLSTFDFLKENN  185 (415)
T ss_pred             EEEEecc-ChhHHHHhccCC
Confidence            9999988 559999999854

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=97.05  E-value=0.0032  Score=60.04  Aligned_cols=87  Identities=33%  Similarity=0.492  Sum_probs=72.5

Q ss_pred             ccccceecccCceeEEEEEcCCCcEEEEEEeccCChh---hHHHHHHHHHHHhcCCCC-CcccceeEEEeCceeeEEEec
Q 013018          348 FSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQ---GGQEFKNEVVLVAKLQHR-NLVRLLGFCLEGEEKILVYEF  423 (451)
Q Consensus       348 ~~~~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~~~---~~~~~~~E~~~l~~l~h~-niv~l~g~~~~~~~~~lv~ey  423 (451)
                      |.....||.|.||.||++...  ..+++|.+......   ....+.+|+.++..+.|+ +++++..........++++||
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~   79 (384)
T COG0515           2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY   79 (384)
T ss_pred             ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence            445678999999999999975  78899988754322   357899999999999888 799999998766678999999


Q ss_pred             cCCCCHHHHHhcc
Q 013018          424 VPNKSLDYFLYAQ  436 (451)
Q Consensus       424 ~~~GsL~~~L~~~  436 (451)
                      +.+++|.+++...
T Consensus        80 ~~~~~l~~~~~~~   92 (384)
T COG0515          80 VDGGSLEDLLKKI   92 (384)
T ss_pred             CCCCcHHHHHHhc
Confidence            9999999877754

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=96.90  E-value=0.0019  Score=63.09  Aligned_cols=90  Identities=26%  Similarity=0.369  Sum_probs=66.3

Q ss_pred             cccccceecccCceeEEEEEcCC--CcEEEEEEeccCChhhHHHHHHHHHHHhcCCC----CCcccceeEE-EeCceeeE
Q 013018          347 NFSTDNKLGEGGFGEVYKGVLPS--GQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH----RNLVRLLGFC-LEGEEKIL  419 (451)
Q Consensus       347 ~~~~~~~lG~G~fg~V~~~~l~~--g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h----~niv~l~g~~-~~~~~~~l  419 (451)
                      +|...++||+|+||.||.+.-..  ...+|+|.-..........+..|..++..+.+    +++..++... ......+|
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i   98 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI   98 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence            68889999999999999999433  35788887765432222367888888888863    4677777666 35667889


Q ss_pred             EEeccCCCCHHHHHhccC
Q 013018          420 VYEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       420 v~ey~~~GsL~~~L~~~~  437 (451)
                      ||+.+ +-+|.++.+...
T Consensus        99 VM~l~-G~sL~dl~~~~~  115 (322)
T KOG1164|consen   99 VMSLL-GPSLEDLRKRNP  115 (322)
T ss_pred             EEecc-CccHHHHHHhCC
Confidence            99977 779999776544

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=96.83  E-value=0.00013  Score=72.50  Aligned_cols=93  Identities=19%  Similarity=0.214  Sum_probs=75.8

Q ss_pred             ccccccceecccCceeEEEEEcCCCc-EEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEE
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVLPSGQ-EIAVKRLSRS---SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  421 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l~~g~-~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~  421 (451)
                      .+++....||-|+||.|-.....+.. ..|+|++++.   ...+.+....|-.+|.+.+.|.||+|+--+.+...+|++|
T Consensus       420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLm  499 (732)
T KOG0614|consen  420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLM  499 (732)
T ss_pred             hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhH
Confidence            34555678999999999998874433 3688887643   2334467889999999999999999999888889999999


Q ss_pred             eccCCCCHHHHHhccCC
Q 013018          422 EFVPNKSLDYFLYAQSP  438 (451)
Q Consensus       422 ey~~~GsL~~~L~~~~~  438 (451)
                      |-|-+|.|+..|+++..
T Consensus       500 EaClGGElWTiLrdRg~  516 (732)
T KOG0614|consen  500 EACLGGELWTILRDRGS  516 (732)
T ss_pred             HhhcCchhhhhhhhcCC
Confidence            99999999999998653

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=96.75  E-value=0.0063  Score=56.73  Aligned_cols=84  Identities=18%  Similarity=0.198  Sum_probs=61.6

Q ss_pred             cceec-ccCceeEEEEEcCCCcEEEEEEeccCC-------------hhhHHHHHHHHHHHhcCCCCCc--ccceeEEEeC
Q 013018          351 DNKLG-EGGFGEVYKGVLPSGQEIAVKRLSRSS-------------GQGGQEFKNEVVLVAKLQHRNL--VRLLGFCLEG  414 (451)
Q Consensus       351 ~~~lG-~G~fg~V~~~~l~~g~~vavK~l~~~~-------------~~~~~~~~~E~~~l~~l~h~ni--v~l~g~~~~~  414 (451)
                      ...|| .|+.|+||+... .+..++||......             ......+.+|+.++.+++|+++  ...++.....
T Consensus        36 ~~~lg~~~g~gtv~~v~~-~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~  114 (239)
T PRK01723         36 ARVVGSAKGRGTTWFVQT-PGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR  114 (239)
T ss_pred             CceeecCCCCccEEEEEe-CCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence            46787 899999999988 47788888875321             1122467889999999998875  6667664432


Q ss_pred             c----eeeEEEeccCC-CCHHHHHhc
Q 013018          415 E----EKILVYEFVPN-KSLDYFLYA  435 (451)
Q Consensus       415 ~----~~~lv~ey~~~-GsL~~~L~~  435 (451)
                      .    ..+||+||+++ .+|.+++.+
T Consensus       115 ~~~~~~~~lV~e~l~G~~~L~~~l~~  140 (239)
T PRK01723        115 HGLFYRADILIERIEGARDLVALLQE  140 (239)
T ss_pred             cCcceeeeEEEEecCCCCCHHHHHhc
Confidence            2    23599999997 699998875

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=96.71  E-value=0.0012  Score=60.85  Aligned_cols=90  Identities=22%  Similarity=0.392  Sum_probs=67.8

Q ss_pred             ccccccceecccCceeEEEEEc-CCCcEEEEEEeccCChhhHHHHHHHHHHHhcC-CCCCcccceeEEE-eCceeeEEEe
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKL-QHRNLVRLLGFCL-EGEEKILVYE  422 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~-~~~~~~lv~e  422 (451)
                      +.|.+.+.||+|.||.+..+.. .....+++|.+.... ....+|.+|..----| .|.||+.-+.+-. ..+....++|
T Consensus        24 d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~-tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE  102 (378)
T KOG1345|consen   24 DVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ-TTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQE  102 (378)
T ss_pred             hhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcch-hhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeec
Confidence            3467788999999999999984 456788888876442 3457899998654455 5899998775544 4556668999


Q ss_pred             ccCCCCHHHHHhcc
Q 013018          423 FVPNKSLDYFLYAQ  436 (451)
Q Consensus       423 y~~~GsL~~~L~~~  436 (451)
                      |+|.|+|.+-+-..
T Consensus       103 ~aP~gdL~snv~~~  116 (378)
T KOG1345|consen  103 FAPRGDLRSNVEAA  116 (378)
T ss_pred             cCccchhhhhcCcc
Confidence            99999998766653

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=96.65  E-value=0.0026  Score=60.40  Aligned_cols=85  Identities=26%  Similarity=0.444  Sum_probs=61.2

Q ss_pred             cccccceecccCceeEEEEE-cCCCcEEEEEEeccCChhhHHHHHHHHHHHhcC-CCCCcccceeEEEeCceeeEEEecc
Q 013018          347 NFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKILVYEFV  424 (451)
Q Consensus       347 ~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lv~ey~  424 (451)
                      +|...++||+|.||.++.|+ +-+++.||||.=...+  +...+..|-+..+.| ..++|...+-+--.+.+-.||+|.+
T Consensus        29 hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS--~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLL  106 (449)
T KOG1165|consen   29 HYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS--EAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLL  106 (449)
T ss_pred             cceeccccccCcceeeecccccccCceEEEEeccccC--CcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhh
Confidence            47788999999999999999 6689999999654433  223456666666666 3566666544444455667999988


Q ss_pred             CCCCHHHHHh
Q 013018          425 PNKSLDYFLY  434 (451)
Q Consensus       425 ~~GsL~~~L~  434 (451)
                       +-||+++..
T Consensus       107 -GPSLEDLFD  115 (449)
T KOG1165|consen  107 -GPSLEDLFD  115 (449)
T ss_pred             -CcCHHHHHH
Confidence             668988754

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=96.62  E-value=0.0012  Score=71.86  Aligned_cols=91  Identities=22%  Similarity=0.378  Sum_probs=65.1

Q ss_pred             HHhhccccccceecccCceeEEEEEcCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCC---CCCcccceeEEEeCceee
Q 013018          342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQ---HRNLVRLLGFCLEGEEKI  418 (451)
Q Consensus       342 ~~~~~~~~~~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~g~~~~~~~~~  418 (451)
                      +...+.|.+.+.||+|+||.||+|.-.+|+.||+|.-+....   .+|.-=.+++.+|+   -+.|+.+-......+.-+
T Consensus       694 ~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~---WEfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~  770 (974)
T KOG1166|consen  694 EVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNP---WEFYICLQVMERLKPQMLPSIMHISSAHVFQNASV  770 (974)
T ss_pred             eecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCc---eeeeehHHHHHhhchhhhcchHHHHHHHccCCcce
Confidence            444556778889999999999999977799999998765543   34443344455554   133444444444566678


Q ss_pred             EEEeccCCCCHHHHHhc
Q 013018          419 LVYEFVPNKSLDYFLYA  435 (451)
Q Consensus       419 lv~ey~~~GsL~~~L~~  435 (451)
                      ||+||.+.|+|.+++..
T Consensus       771 lv~ey~~~Gtlld~~N~  787 (974)
T KOG1166|consen  771 LVSEYSPYGTLLDLINT  787 (974)
T ss_pred             eeeeccccccHHHhhcc
Confidence            99999999999999983

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=96.61  E-value=0.0013  Score=67.37  Aligned_cols=89  Identities=27%  Similarity=0.390  Sum_probs=71.8

Q ss_pred             hccccccceecccCceeEEEEE-cCCCcEEEEEEeccCChhhHHHHHHHHHHHhcC-CCCCcccceeEEEeCceeeEEEe
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKILVYE  422 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e  422 (451)
                      ++.+.....+|.|+|+.|-.+. .+.++..+||++.+..    .+-.+|+.++... +|||++++.+.+..+.+.|+|+|
T Consensus       321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~----~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e  396 (612)
T KOG0603|consen  321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA----DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVME  396 (612)
T ss_pred             chhhccccccCCCCccceeeeeccccccchhheeccccc----cccccccchhhhhcCCCcceeecceecCCceeeeeeh
Confidence            4556667789999999999888 5678889999997652    2334566565555 79999999999999999999999


Q ss_pred             ccCCCCHHHHHhccC
Q 013018          423 FVPNKSLDYFLYAQS  437 (451)
Q Consensus       423 y~~~GsL~~~L~~~~  437 (451)
                      .+.+|-|.+-++..+
T Consensus       397 ~l~g~ell~ri~~~~  411 (612)
T KOG0603|consen  397 LLDGGELLRRIRSKP  411 (612)
T ss_pred             hccccHHHHHHHhcc
Confidence            999998888877644

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=96.23  E-value=0.0044  Score=62.12  Aligned_cols=95  Identities=20%  Similarity=0.242  Sum_probs=74.2

Q ss_pred             ccccccceecccCceeEEEEE-cCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCC------CCCcccceeEEEeCceee
Q 013018          346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQ------HRNLVRLLGFCLEGEEKI  418 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~------h~niv~l~g~~~~~~~~~  418 (451)
                      .+|......|+|-|+.|.++. ...|..||||+|.... .....=+.|+++|.+|+      --|.++|+-.+....+++
T Consensus       432 ~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE-~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknHLC  510 (752)
T KOG0670|consen  432 SRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNE-VMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNHLC  510 (752)
T ss_pred             ceeEEEeccccceeeeeeeccccCCCCeeEEEEeecch-HHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcceeE
Confidence            456667778999999999998 5568899999997542 22345678999999985      247888888888889999


Q ss_pred             EEEeccCCCCHHHHHhccCCCCCC
Q 013018          419 LVYEFVPNKSLDYFLYAQSPKNNN  442 (451)
Q Consensus       419 lv~ey~~~GsL~~~L~~~~~~~~l  442 (451)
                      ||+|-+ .-+|.+.|+.......|
T Consensus       511 lVFE~L-slNLRevLKKyG~nvGL  533 (752)
T KOG0670|consen  511 LVFEPL-SLNLREVLKKYGRNVGL  533 (752)
T ss_pred             EEehhh-hchHHHHHHHhCcccce
Confidence            999987 44899999976654444

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=96.12  E-value=0.0066  Score=55.32  Aligned_cols=82  Identities=17%  Similarity=0.246  Sum_probs=61.2

Q ss_pred             ceecccCceeEEEEEcCCCcEEEEEEeccCCh-hhHHHHHHHHHHHhcCCCC--CcccceeEEEeCc---eeeEEEeccC
Q 013018          352 NKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSG-QGGQEFKNEVVLVAKLQHR--NLVRLLGFCLEGE---EKILVYEFVP  425 (451)
Q Consensus       352 ~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~--niv~l~g~~~~~~---~~~lv~ey~~  425 (451)
                      +.|+.|..+.+|+....+|+.+++|....... .....+.+|.+++..+++.  ++.+++.+.....   ..++|+||++
T Consensus         4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~   83 (223)
T cd05154           4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD   83 (223)
T ss_pred             eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence            56899999999999986678899998754322 1345789999999998653  4566676665432   5689999999


Q ss_pred             CCCHHHHH
Q 013018          426 NKSLDYFL  433 (451)
Q Consensus       426 ~GsL~~~L  433 (451)
                      +++|.+.+
T Consensus        84 G~~l~~~~   91 (223)
T cd05154          84 GRVLRDRL   91 (223)
T ss_pred             CEecCCCC
Confidence            88776644

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>cd05151 ChoK Choline Kinase (ChoK)

Probab=95.43  E-value=0.024  Score=49.28  Aligned_cols=77  Identities=17%  Similarity=0.140  Sum_probs=54.7

Q ss_pred             cceecccCceeEEEEEcCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcc-cceeEEEeCceeeEEEeccCCCCH
Q 013018          351 DNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLV-RLLGFCLEGEEKILVYEFVPNKSL  429 (451)
Q Consensus       351 ~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv-~l~g~~~~~~~~~lv~ey~~~GsL  429 (451)
                      .+.|+.|.++.||+... .+..+++|....... ....+.+|+..+..+.+.+++ ++++.  .....++||||+++.++
T Consensus         3 ~~~l~~G~~~~vy~~~~-~~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~--~~~~~~lv~e~i~G~~l   78 (170)
T cd05151           3 ISPLKGGMTNKNYRVEV-ANKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYF--DPETGVLITEFIEGSEL   78 (170)
T ss_pred             eeecCCcccCceEEEEE-CCeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEE--eCCCCeEEEEecCCCcc
Confidence            35788999999999987 477899998754421 223567888888888665554 34433  23345799999999887


Q ss_pred             HH
Q 013018          430 DY  431 (451)
Q Consensus       430 ~~  431 (451)
                      .+
T Consensus        79 ~~   80 (170)
T cd05151          79 LT   80 (170)
T ss_pred             cc
Confidence            64

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>PF08693 SKG6: Transmembrane alpha-helix domain; InterPro: IPR014805 SKG6 and AXL2 are membrane proteins that show polarised intracellular localisation [, ]

Probab=94.70  E-value=0.046  Score=34.87  Aligned_cols=28  Identities=18%  Similarity=0.439  Sum_probs=15.7

Q ss_pred             cCceeEeeehhHHHHHHHHHhhhhhhee
Q 013018          283 SSSTIIAIVAPIAVTAVLFIVGLCYFIR  310 (451)
Q Consensus       283 s~~~ii~ivv~~~~~~li~i~~~~~~~r  310 (451)
                      +..+.++++++++++++++++++++++|
T Consensus        10 ~vaIa~~VvVPV~vI~~vl~~~l~~~~r   37 (40)
T PF08693_consen   10 TVAIAVGVVVPVGVIIIVLGAFLFFWYR   37 (40)
T ss_pred             eEEEEEEEEechHHHHHHHHHHhheEEe
Confidence            4445566777777666665554443333

This entry represents the highly conserved transmembrane alpha-helical domain found in these proteins [, ]. The full-length AXL2 protein has a negative regulatory function in cytokinesis [].

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=94.42  E-value=0.081  Score=46.32  Aligned_cols=80  Identities=20%  Similarity=0.298  Sum_probs=57.2

Q ss_pred             cccceecccCceeEEEEEcCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEeccCCCC
Q 013018          349 STDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKS  428 (451)
Q Consensus       349 ~~~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~~~Gs  428 (451)
                      .....|++|.+|.||.|.+ .|..+++|.-...+  ....+..|++++..+...++.+=+   ..-+...+.|||..+-.
T Consensus        25 ~v~~~L~KG~~s~Vyl~~~-~~~~~a~Kvrr~ds--~r~~l~kEakiLeil~g~~~~p~v---y~yg~~~i~me~i~G~~   98 (201)
T COG2112          25 RVEKELAKGTTSVVYLGEW-RGGEVALKVRRRDS--PRRNLEKEAKILEILAGEGVTPEV---YFYGEDFIRMEYIDGRP   98 (201)
T ss_pred             hhhhhhhcccccEEEEeec-cCceEEEEEecCCc--chhhHHHHHHHHHHhhhcCCCceE---EEechhhhhhhhhcCcc
Confidence            4467899999999999999 55588888776554  346899999999888766554321   11233446699998877


Q ss_pred             HHHHHh
Q 013018          429 LDYFLY  434 (451)
Q Consensus       429 L~~~L~  434 (451)
                      |.++-.
T Consensus        99 L~~~~~  104 (201)
T COG2112          99 LGKLEI  104 (201)
T ss_pred             hhhhhh
Confidence            766544

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=94.10  E-value=0.018  Score=54.44  Aligned_cols=85  Identities=24%  Similarity=0.364  Sum_probs=61.4

Q ss_pred             ccccceecccCceeEEEEE-cCCCcEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCc------eee
Q 013018          348 FSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRS--SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGE------EKI  418 (451)
Q Consensus       348 ~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~------~~~  418 (451)
                      |.....+|.|.- .|..+. .-.++.|++|++...  ..+..+.-.+|..+|..+.|+|+++++.+.....      +.+
T Consensus        19 y~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~y   97 (369)
T KOG0665|consen   19 YVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEVY   97 (369)
T ss_pred             eeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhHH
Confidence            444556666655 344443 225788999987543  2333466789999999999999999999887543      578


Q ss_pred             EEEeccCCCCHHHHHh
Q 013018          419 LVYEFVPNKSLDYFLY  434 (451)
Q Consensus       419 lv~ey~~~GsL~~~L~  434 (451)
                      +||||| .++|.+.++
T Consensus        98 ~v~e~m-~~nl~~vi~  112 (369)
T KOG0665|consen   98 LVMELM-DANLCQVIL  112 (369)
T ss_pred             HHHHhh-hhHHHHHHH
Confidence            999999 458888877

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=93.81  E-value=0.12  Score=52.41  Aligned_cols=79  Identities=27%  Similarity=0.357  Sum_probs=58.7

Q ss_pred             eeEEEEE-cCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEe----CceeeEEEeccCC-CCHHHHH
Q 013018          360 GEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLE----GEEKILVYEFVPN-KSLDYFL  433 (451)
Q Consensus       360 g~V~~~~-l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~----~~~~~lv~ey~~~-GsL~~~L  433 (451)
                      .+.||+. -.+|..+++|+++....+.......-++.++++.|+|+|+|..+...    +..+.+||+|+|+ ++|.++-
T Consensus       290 ~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~~  369 (655)
T KOG3741|consen  290 ITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDLY  369 (655)
T ss_pred             ceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHHH
Confidence            4578887 45889999999954433333334455778899999999999988763    4478899999986 7788877


Q ss_pred             hccCC
Q 013018          434 YAQSP  438 (451)
Q Consensus       434 ~~~~~  438 (451)
                      +.+.+
T Consensus       370 F~~~~  374 (655)
T KOG3741|consen  370 FANPP  374 (655)
T ss_pred             ccCCc
Confidence            76543

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=91.94  E-value=0.25  Score=51.19  Aligned_cols=82  Identities=17%  Similarity=0.278  Sum_probs=55.5

Q ss_pred             ceecccCceeEEEEEcCCCcEEEEEEeccCChhhH------------------------------H----------HHHH
Q 013018          352 NKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGG------------------------------Q----------EFKN  391 (451)
Q Consensus       352 ~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~~~~~------------------------------~----------~~~~  391 (451)
                      +-|+.++.|+||+|++++|+.||||+.++.-.+..                              +          ++.+
T Consensus       131 ~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~  210 (517)
T COG0661         131 EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRR  210 (517)
T ss_pred             CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHH
Confidence            67899999999999999999999999765421110                              0          1344


Q ss_pred             HHHHHhcC----CCCCcccceeEEEe-CceeeEEEeccCCCCHHHHH
Q 013018          392 EVVLVAKL----QHRNLVRLLGFCLE-GEEKILVYEFVPNKSLDYFL  433 (451)
Q Consensus       392 E~~~l~~l----~h~niv~l~g~~~~-~~~~~lv~ey~~~GsL~~~L  433 (451)
                      |+.-+.++    ++..-+..-.++++ .....|+|||+++-.+.+..
T Consensus       211 EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~  257 (517)
T COG0661         211 EAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIA  257 (517)
T ss_pred             HHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHH
Confidence            55555544    33333333344543 45678999999998888874

>PF04478 Mid2: Mid2 like cell wall stress sensor; InterPro: IPR007567 This family represents a region near the C terminus of Mid2, which contains a transmembrane region

Probab=91.66  E-value=0.33  Score=40.91  Aligned_cols=26  Identities=19%  Similarity=0.392  Sum_probs=15.9

Q ss_pred             cCceeEeeehhHHHHHHHHHhhhhhh
Q 013018          283 SSSTIIAIVAPIAVTAVLFIVGLCYF  308 (451)
Q Consensus       283 s~~~ii~ivv~~~~~~li~i~~~~~~  308 (451)
                      ...+++++++++++.+++++++++|+
T Consensus        47 nknIVIGvVVGVGg~ill~il~lvf~   72 (154)
T PF04478_consen   47 NKNIVIGVVVGVGGPILLGILALVFI   72 (154)
T ss_pred             CccEEEEEEecccHHHHHHHHHhhee
Confidence            34578888888766655554444443

The remainder of the protein sequence is serine-rich and of low complexity, and is therefore impossible to align accurately. Mid2 is thought to act as a mechanosensor of cell wall stress. The C-terminal cytoplasmic region of Mid2 is known to interact with Rom2, a guanine nucleotide exchange factor (GEF) for Rho1, which is part of the cell wall integrity signalling pathway [].

>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []

Probab=91.61  E-value=0.074  Score=43.70  Aligned_cols=32  Identities=25%  Similarity=0.341  Sum_probs=28.4

Q ss_pred             cceecccCceeEEEEEcCCCcEEEEEEeccCC
Q 013018          351 DNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSS  382 (451)
Q Consensus       351 ~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~  382 (451)
                      .+-|+.|+.|+||+|.+++|+.||||...+.-
T Consensus        16 ~~PlasASiaQVh~a~l~~g~~VaVKV~rP~i   47 (119)
T PF03109_consen   16 PEPLASASIAQVHRARLKDGEEVAVKVQRPGI   47 (119)
T ss_pred             cchhhheehhhheeeeecccchhhhhhcchHH
Confidence            46799999999999999999999999987653

These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=90.41  E-value=0.38  Score=50.33  Aligned_cols=67  Identities=27%  Similarity=0.249  Sum_probs=52.7

Q ss_pred             cCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEeccCCCCHHHHHhc
Q 013018          367 LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYA  435 (451)
Q Consensus       367 l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~~~GsL~~~L~~  435 (451)
                      ..++.+|.|...+..+....+...+.++.|+.++||||++++......+..|||+|-+.-  |..+|..
T Consensus        34 k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~P--l~~~lk~  100 (690)
T KOG1243|consen   34 KADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVRP--LETVLKE  100 (690)
T ss_pred             eccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeecccc--HHHHHHH
Confidence            456788988888776653445677888999999999999999999888899999998743  5555443

>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane

Probab=88.61  E-value=0.16  Score=41.46  Aligned_cols=36  Identities=25%  Similarity=0.411  Sum_probs=19.8

Q ss_pred             CCccCceeEeeehhHHHHHHHHHhhhhhheeecccc
Q 013018          280 SGISSSTIIAIVAPIAVTAVLFIVGLCYFIRKAKNK  315 (451)
Q Consensus       280 ~~~s~~~ii~ivv~~~~~~li~i~~~~~~~rrr~~~  315 (451)
                      .+.+...+++|++++++.+++++++++|+.||++|+
T Consensus        59 h~fs~~~i~~Ii~gv~aGvIg~Illi~y~irR~~Kk   94 (122)
T PF01102_consen   59 HRFSEPAIIGIIFGVMAGVIGIILLISYCIRRLRKK   94 (122)
T ss_dssp             SSSS-TCHHHHHHHHHHHHHHHHHHHHHHHHHHS--
T ss_pred             cCccccceeehhHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            345556677777777666666555555555544444

Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=87.96  E-value=2.1  Score=37.95  Aligned_cols=84  Identities=14%  Similarity=0.204  Sum_probs=59.1

Q ss_pred             ceecccCceeEEEEEcCCCcEEEEEEeccCC---hh-----hHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEec
Q 013018          352 NKLGEGGFGEVYKGVLPSGQEIAVKRLSRSS---GQ-----GGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  423 (451)
Q Consensus       352 ~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~---~~-----~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey  423 (451)
                      ..+.+|+-..++.+.+ -|..+.+|.-.++.   ++     ..+.-.+|+.++.+++--.|....=+....+...|+|||
T Consensus         2 ~~i~~GAEa~i~~~~~-~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~   80 (204)
T COG3642           2 DLIKQGAEAIIYLTDF-LGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEY   80 (204)
T ss_pred             chhhCCcceeEEeeec-cCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEE
Confidence            3578899999999987 45556666543221   11     124567899999988655555444455667788899999


Q ss_pred             cCCCCHHHHHhcc
Q 013018          424 VPNKSLDYFLYAQ  436 (451)
Q Consensus       424 ~~~GsL~~~L~~~  436 (451)
                      .++-.|.++|...
T Consensus        81 I~G~~lkd~l~~~   93 (204)
T COG3642          81 IEGELLKDALEEA   93 (204)
T ss_pred             eCChhHHHHHHhc
Confidence            9999999888875

>KOG4258 consensus Insulin/growth factor receptor (contains protein kinase domain) [Signal transduction mechanisms]

Probab=86.86  E-value=0.42  Score=50.95  Aligned_cols=32  Identities=31%  Similarity=0.588  Sum_probs=27.9

Q ss_pred             cChHHHHHhhccccccceecccCceeEEEEEcC
Q 013018          336 FDFETIEVATNNFSTDNKLGEGGFGEVYKGVLP  368 (451)
Q Consensus       336 ~~~~~l~~~~~~~~~~~~lG~G~fg~V~~~~l~  368 (451)
                      +-.++++..++ +...+.||+|+||.||.|.-+
T Consensus       985 yv~deWe~~r~-it~~relg~gsfg~Vy~g~~n 1016 (1025)
T KOG4258|consen  985 YVPDEWEVSRE-ITLGRELGQGSFGMVYEGNAN 1016 (1025)
T ss_pred             CChhHHHHHHH-HhhhhhhccCccceEEEecCC
Confidence            55688999888 889999999999999999753

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=86.67  E-value=0.88  Score=47.20  Aligned_cols=31  Identities=19%  Similarity=0.398  Sum_probs=27.4

Q ss_pred             cceecccCceeEEEEEcCCCcEEEEEEeccC
Q 013018          351 DNKLGEGGFGEVYKGVLPSGQEIAVKRLSRS  381 (451)
Q Consensus       351 ~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~  381 (451)
                      .+.|+.-+.|+||++++++|+.||||..++.
T Consensus       166 ~~piaaASlaQVhrA~L~~G~~VaVKVQ~P~  196 (538)
T KOG1235|consen  166 EEPIAAASLAQVHRARLKNGEDVAVKVQHPG  196 (538)
T ss_pred             cchhhhcchhheEEEEecCCCEEEEEecCcC
Confidence            4678999999999999999999999987654

>PF06697 DUF1191: Protein of unknown function (DUF1191); InterPro: IPR010605 This family contains hypothetical plant proteins of unknown function

Probab=85.06  E-value=0.63  Score=43.61  Aligned_cols=27  Identities=15%  Similarity=0.251  Sum_probs=12.4

Q ss_pred             eEeeehhHHHHHHHHHhhhhhheeecc
Q 013018          287 IIAIVAPIAVTAVLFIVGLCYFIRKAK  313 (451)
Q Consensus       287 ii~ivv~~~~~~li~i~~~~~~~rrr~  313 (451)
                      ++++++++++++++.++++...+.+|+
T Consensus       216 v~g~~~G~~~L~ll~~lv~~~vr~krk  242 (278)
T PF06697_consen  216 VVGVVGGVVLLGLLSLLVAMLVRYKRK  242 (278)
T ss_pred             EEEehHHHHHHHHHHHHHHhhhhhhHH
Confidence            444556655555444343333333333

>PTZ00382 Variant-specific surface protein (VSP); Provisional

Probab=84.92  E-value=1.2  Score=34.87  Aligned_cols=19  Identities=26%  Similarity=0.471  Sum_probs=12.0

Q ss_pred             CCccCceeEeeehhHHHHH
Q 013018          280 SGISSSTIIAIVAPIAVTA  298 (451)
Q Consensus       280 ~~~s~~~ii~ivv~~~~~~  298 (451)
                      +..+...|.+|++++++++
T Consensus        61 ~~ls~gaiagi~vg~~~~v   79 (96)
T PTZ00382         61 SGLSTGAIAGISVAVVAVV   79 (96)
T ss_pred             CCcccccEEEEEeehhhHH
Confidence            4556677777777655444

>PF15102 TMEM154: TMEM154 protein family

Probab=84.47  E-value=1.6  Score=36.72  Aligned_cols=14  Identities=29%  Similarity=0.667  Sum_probs=7.2

Q ss_pred             eEeeehhHHHHHHH
Q 013018          287 IIAIVAPIAVTAVL  300 (451)
Q Consensus       287 ii~ivv~~~~~~li  300 (451)
                      ++.|+++.++++++
T Consensus        58 iLmIlIP~VLLvlL   71 (146)
T PF15102_consen   58 ILMILIPLVLLVLL   71 (146)
T ss_pred             EEEEeHHHHHHHHH
Confidence            55666664444333

>PRK10593 hypothetical protein; Provisional

Probab=84.30  E-value=2.9  Score=40.24  Aligned_cols=79  Identities=11%  Similarity=0.067  Sum_probs=56.0

Q ss_pred             ccccceecccCceeEEEEEcCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCC---CCcccceeEEEe---CceeeEEE
Q 013018          348 FSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH---RNLVRLLGFCLE---GEEKILVY  421 (451)
Q Consensus       348 ~~~~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h---~niv~l~g~~~~---~~~~~lv~  421 (451)
                      +...+.||.|..+.||+-...+++ +.+|..+..  .....|..|.+.|+.|..   -.+.+.++.+..   .+..+|||
T Consensus        16 ~~~~~~i~~G~~~~vy~~~~~~~~-~~~k~~~~~--~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVm   92 (297)
T PRK10593         16 LSRVECISEQPYAALWALYDSQGN-PMPLMARSF--STPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLL   92 (297)
T ss_pred             hheeeecCCccceeEEEEEcCCCC-EEEEEeccc--ccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEE
Confidence            445678999999999998875564 556664321  123578899998888743   356677777653   35689999


Q ss_pred             eccCCCCH
Q 013018          422 EFVPNKSL  429 (451)
Q Consensus       422 ey~~~GsL  429 (451)
                      |+++++++
T Consensus        93 E~i~G~~~  100 (297)
T PRK10593         93 ERLRGVSV  100 (297)
T ss_pred             eccCCEec
Confidence            99998765

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=83.19  E-value=5  Score=35.68  Aligned_cols=87  Identities=16%  Similarity=0.190  Sum_probs=58.0

Q ss_pred             ccceecccCceeEEEEEcCCCcEEEEEEeccCC--------hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEE
Q 013018          350 TDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSS--------GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  421 (451)
Q Consensus       350 ~~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~--------~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~  421 (451)
                      ....+-+|+-+.|+++.+ .|+...||.-....        .-......+|++.+.+++--.|.-..=+..+...-.|+|
T Consensus        11 ~l~likQGAEArv~~~~~-~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M   89 (229)
T KOG3087|consen   11 SLELIKQGAEARVPRGSF-SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM   89 (229)
T ss_pred             cceeeeccceeeEeeecc-CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence            456888999999999999 66666666432211        112356789999999876444443333444455567899


Q ss_pred             eccCC-CCHHHHHhccC
Q 013018          422 EFVPN-KSLDYFLYAQS  437 (451)
Q Consensus       422 ey~~~-GsL~~~L~~~~  437 (451)
                      ||.++ -++.+|+....
T Consensus        90 E~~~g~~~vk~~i~~~~  106 (229)
T KOG3087|consen   90 EFIDGASTVKDFILSTM  106 (229)
T ss_pred             EeccchhHHHHHHHHHc
Confidence            99965 47888888643

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=82.72  E-value=0.19  Score=55.41  Aligned_cols=87  Identities=18%  Similarity=0.186  Sum_probs=63.8

Q ss_pred             cccccceecccCceeEEEEEcCCCcEEEEEEeccCC-hhhHHHHHHHHHH--HhcCCCCCcccceeEEEeCceeeEEEec
Q 013018          347 NFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSS-GQGGQEFKNEVVL--VAKLQHRNLVRLLGFCLEGEEKILVYEF  423 (451)
Q Consensus       347 ~~~~~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~-~~~~~~~~~E~~~--l~~l~h~niv~l~g~~~~~~~~~lv~ey  423 (451)
                      ++...+.||.++|=+|.+++-+.|. |+||.+.+.. .-..++|.++++-  ...++|||.+++.-+-....-.|||-+|
T Consensus        24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRqy  102 (1431)
T KOG1240|consen   24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQY  102 (1431)
T ss_pred             ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHHH
Confidence            4666789999999999999987887 8889886553 2334555544433  4456899999988776666667888888


Q ss_pred             cCCCCHHHHHhc
Q 013018          424 VPNKSLDYFLYA  435 (451)
Q Consensus       424 ~~~GsL~~~L~~  435 (451)
                      ..+ +|.+-|.-
T Consensus       103 vkh-nLyDRlST  113 (1431)
T KOG1240|consen  103 VKH-NLYDRLST  113 (1431)
T ss_pred             Hhh-hhhhhhcc
Confidence            855 77776664

>PLN02876 acyl-CoA dehydrogenase

Probab=81.63  E-value=3.7  Score=45.57  Aligned_cols=78  Identities=12%  Similarity=0.302  Sum_probs=54.6

Q ss_pred             cceecccCceeEEEEEcCCC---cEEEEEEeccCC-hhhHHHHHHHHHHHhcCC-CCCc--ccceeEEEeC---ceeeEE
Q 013018          351 DNKLGEGGFGEVYKGVLPSG---QEIAVKRLSRSS-GQGGQEFKNEVVLVAKLQ-HRNL--VRLLGFCLEG---EEKILV  420 (451)
Q Consensus       351 ~~~lG~G~fg~V~~~~l~~g---~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~-h~ni--v~l~g~~~~~---~~~~lv  420 (451)
                      .+.++.|....+|+-...++   ..+++|+..... ......+.+|.++|..+. |.++  .+.+++|...   +..++|
T Consensus        43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flV  122 (822)
T PLN02876         43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYI  122 (822)
T ss_pred             EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEE
Confidence            56788999999998876553   356666654322 123357889999999985 6665  6667777543   357899


Q ss_pred             EeccCCCC
Q 013018          421 YEFVPNKS  428 (451)
Q Consensus       421 ~ey~~~Gs  428 (451)
                      |||+++..
T Consensus       123 ME~v~G~~  130 (822)
T PLN02876        123 MEYLEGRI  130 (822)
T ss_pred             EEecCCcc
Confidence            99998754

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=80.55  E-value=3.4  Score=37.28  Aligned_cols=65  Identities=25%  Similarity=0.396  Sum_probs=48.3

Q ss_pred             ccccccceecccCc-eeEEEEEcCCCcEEEEEEecc---CC---------h---------hhHHHHHHHHHHHhcCC---
Q 013018          346 NNFSTDNKLGEGGF-GEVYKGVLPSGQEIAVKRLSR---SS---------G---------QGGQEFKNEVVLVAKLQ---  400 (451)
Q Consensus       346 ~~~~~~~~lG~G~f-g~V~~~~l~~g~~vavK~l~~---~~---------~---------~~~~~~~~E~~~l~~l~---  400 (451)
                      .+++..+.||.|.. |.|||..+ +|...|+|....   ..         .         .....|..|.+..++|+   
T Consensus        37 ~~I~flefLg~g~~~~~V~kv~I-~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~~  115 (207)
T PF13095_consen   37 DDIEFLEFLGHGSHDGYVFKVEI-DGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEAG  115 (207)
T ss_pred             CcEeeeeecCCCCceeEEEEEEE-CCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhcc
Confidence            45777899999999 99999999 778999999321   00         0         01135889999888874   


Q ss_pred             CCCc--ccceeEE
Q 013018          401 HRNL--VRLLGFC  411 (451)
Q Consensus       401 h~ni--v~l~g~~  411 (451)
                      +.++  |+..|+.
T Consensus       116 ~e~~~Avkc~Gyl  128 (207)
T PF13095_consen  116 REGLWAVKCHGYL  128 (207)
T ss_pred             ccCceEEEeeEEE
Confidence            4566  7888876

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	451
3tl8_A	349	The Avrptob-Bak1 Complex Reveals Two Structurally S		6e-20
3uim_A	326	Structural Basis For The Impact Of Phosphorylation		1e-18
2qkw_B	321	Structural Basis For Activation Of Plant Immunity B		1e-14
3hgk_A	327	Crystal Structure Of Effect Protein Avrptob Complex		1e-14
2oib_A	301	Crystal Structure Of Irak4 Kinase Domain Apo Form L		7e-14
2nry_A	307	Crystal Structure Of Irak-4 Length = 307		8e-14
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		8e-14
2o8y_A	298	Apo Irak4 Kinase Domain Length = 298		8e-13
4asz_A	299	Crystal Structure Of Apo Trkb Kinase Domain Length		7e-11
4gt5_A	306	Crystal Structure Of The Inactive Trka Kinase Domai		2e-10
4f0i_A	300	Crystal Structure Of Apo Trka Length = 300		2e-10
4aoj_A	329	Human Trka In Complex With The Inhibitor Az-23 Leng		3e-10
4fnw_A	327	Crystal Structure Of The Apo F1174l Anaplastic Lymp		3e-09
2yjr_A	342	Structure Of F1174l Mutant Anaplastic Lymphoma Kina		4e-09
4fnz_A	327	Crystal Structure Of Human Anaplastic Lymphoma Kina		1e-08
4dce_A	333	Crystal Structure Of Human Anaplastic Lymphoma Kina		1e-08
4fnx_A	327	Crystal Structure Of The Apo R1275q Anaplastic Lymp		1e-08
2yfx_A	327	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		1e-08
2yhv_A	342	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		1e-08
3aox_A	344	X-Ray Crystal Structure Of Human Anaplastic Lymphom		1e-08
2xb7_A	315	Structure Of Human Anaplastic Lymphoma Kinase In Co		1e-08
3l9p_A	367	Crystal Structure Of The Anaplastic Lymphoma Kinase		1e-08
2xp2_A	327	Structure Of The Human Anaplastic Lymphoma Kinase I		1e-08
4fob_A	353	Crystal Structure Of Human Anaplastic Lymphoma Kina		1e-08
3lct_A	344	Crystal Structure Of The Anaplastic Lymphoma Kinase		1e-08
2yjs_A	342	Structure Of C1156y Mutant Anaplastic Lymphoma Kina		1e-08
1luf_A	343	Crystal Structure Of The Musk Tyrosine Kinase: Insi		2e-08
4gt4_A	308	Structure Of Unliganded, Inactive Ror2 Kinase Domai		2e-08
3zzw_A	289	Crystal Structure Of The Kinase Domain Of Ror2 Leng		2e-08
3v5q_A	297	Discovery Of A Selective Trk Inhibitor With Efficac		2e-08
3bbt_B	328	Crystal Structure Of The Erbb4 Kinase In Complex Wi		5e-08
2r4b_A	321	Erbb4 Kinase Domain Complexed With A Thienopyrimidi		6e-08
2qoc_A	344	Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp		1e-07
3dzq_A	361	Human Epha3 Kinase Domain In Complex With Inhibitor		1e-07
3fxx_A	371	Human Epha3 Kinase And Juxtamembrane Region Bound T		1e-07
2qok_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		1e-07
2qoo_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		1e-07
2gsf_A	373	The Human Epha3 Receptor Tyrosine Kinase And Juxtam		1e-07
2qoi_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		1e-07
2qof_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f		1e-07
2qod_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y602f		1e-07
2qol_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596:y		2e-07
2qob_A	344	Human Epha3 Kinase Domain, Base Structure Length =		4e-07
2qon_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		5e-07
3qrj_A	277	The Crystal Structure Of Human Abl1 Kinase Domain T		5e-07
2qo7_A	373	Human Epha3 Kinase And Juxtamembrane Region, Dephos		5e-07
3qri_A	277	The Crystal Structure Of Human Abl1 Kinase Domain I		6e-07
2hzi_A	277	Abl Kinase Domain In Complex With Pd180970 Length =		9e-07
2hz0_A	270	Abl Kinase Domain In Complex With Nvp-Aeg082 Length		9e-07
2gqg_A	278	X-Ray Crystal Structure Of Dasatinib (Bms-354825) B		9e-07
3gvu_A	292	The Crystal Structure Of Human Abl2 In Complex With		1e-06
2hyy_A	273	Human Abl Kinase Domain In Complex With Imatinib (S		1e-06
1opk_A	495	Structural Basis For The Auto-Inhibition Of C-Abl T		1e-06
2v7a_A	286	Crystal Structure Of The T315i Abl Mutant In Comple		1e-06
3oy3_A	284	Crystal Structure Of Abl T315i Mutant Kinase Domain		1e-06
2z60_A	288	Crystal Structure Of The T315i Mutant Of Abl Kinase		1e-06
1fpu_A	293	Crystal Structure Of Abl Kinase Domain In Complex W		1e-06
2f4j_A	287	Structure Of The Kinase Domain Of An Imatinib-Resis		1e-06
2g2f_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		1e-06
2g1t_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		1e-06
2qoh_A	288	Crystal Structure Of Abl Kinase Bound With Ppy-a Le		1e-06
2e2b_A	293	Crystal Structure Of The C-Abl Kinase Domain In Com		1e-06
2hiw_A	287	Crystal Structure Of Inactive Conformation Abl Kina		1e-06
1opl_A	537	Structural Basis For The Auto-Inhibition Of C-Abl T		1e-06
3oxz_A	284	Crystal Structure Of Abl Kinase Domain Bound With A		1e-06
3pyy_A	298	Discovery And Characterization Of A Cell-Permeable,		1e-06
3dk6_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		2e-06
2fo0_A	495	Organization Of The Sh3-Sh2 Unit In Active And Inac		2e-06
4fvp_A	289	Crystal Structure Of The Jak2 Pseudokinase Domain (		2e-06
2oj9_A	307	Structure Of Igf-1r Kinase Domain Complexed With A		2e-06
3dk7_A	277	Crystal Structure Of Mutant Abl Kinase Domain In Co		2e-06
3i81_A	315	Crystal Structure Of Insulin-Like Growth Factor 1 R		2e-06
3o23_A	305	Human Unphosphorylated Igf1-R Kinase Domain In Comp		2e-06
4fvr_A	289	Crystal Structure Of The Jak2 Pseudokinase Domain M		2e-06
1k3a_A	299	Structure Of The Insulin-Like Growth Factor 1 Recep		3e-06
2zm3_A	308	Complex Structure Of Insulin-Like Growth Factor Rec		3e-06
1jqh_A	308	Igf-1 Receptor Kinase Domain Length = 308		3e-06
3lvp_A	336	Crystal Structure Of Bisphosphorylated Igf1-R Kinas		3e-06
3d94_A	301	Crystal Structure Of The Insulin-Like Growth Factor		3e-06
1m7n_A	322	Crystal Structure Of Unactivated Apo Insulin-Like G		3e-06
3qqu_A	301	Cocrystal Structure Of Unphosphorylated Igf With Py		3e-06
1sm2_A	264	Crystal Structure Of The Phosphorylated Interleukin		3e-06
3p86_A	309	Crystal Structure Of Ctr1 Kinase Domain Mutant D676		3e-06
4f1m_A	287	Crystal Structure Of The G1179s Roco4 Kinase Domain		4e-06
3miy_A	266	X-Ray Crystal Structure Of Itk Complexed With Sunit		4e-06
3v5j_A	266	Crystal Structure Of Interleukin-2 Inducible T-Cell		4e-06
3dk3_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		4e-06
4f1o_A	287	Crystal Structure Of The L1180t Mutant Roco4 Kinase		4e-06
4f0f_A	287	Crystal Structure Of The Roco4 Kinase Domain Bound		4e-06
3ppz_A	309	Crystal Structure Of Ctr1 Kinase Domain In Complex		4e-06
4hct_A	269	Crystal Structure Of Itk In Complex With Compound 5		4e-06
1mqb_A	333	Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro		4e-06
3fzo_A	277	Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosin		5e-06
3lw0_A	304	Igf-1rk In Complex With Ligand Msc1609119a-1 Length		6e-06
4h1j_A	293	Crystal Structure Of Pyk2 With The Pyrazole 13a Len		6e-06
2zv7_A	279	Lyn Tyrosine Kinase Domain, Apo Form Length = 279		6e-06
3cc6_A	281	Crystal Structure Of Kinase Domain Of Protein Tyros		6e-06
1p4o_A	322	Structure Of Apo Unactivated Igf-1r Kinase Domain A		6e-06
3a4o_X	286	Lyn Kinase Domain Length = 286		8e-06
2p0c_A	313	Catalytic Domain Of The Proto-Oncogene Tyrosine-Pro		1e-05
3gbz_A	329	Structure Of The Cmgc Cdk Kinase From Giardia Lambl		1e-05
3eyg_A	290	Crystal Structures Of Jak1 And Jak2 Inhibitor Compl		1e-05
4e4l_A	302	Jak1 Kinase (Jh1 Domain) In Complex With Compound 3		1e-05
3t9t_A	267	Crystal Structure Of Btk Mutant (F435t,K596r) Compl		1e-05
3qgw_A	286	Crystal Structure Of Itk Kinase Bound To An Inhibit		2e-05
2xa4_A	298	Inhibitors Of Jak2 Kinase Domain Length = 298		2e-05
3dtc_A	271	Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp		2e-05
4e6d_A	298	Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W		3e-05
2z8c_A	303	Phosphorylated Insulin Receptor Tyrosine Kinase In		3e-05
1irk_A	306	Crystal Structure Of The Tyrosine Kinase Domain Of		3e-05
2zm1_A	285	Crystal Structure Of Imidazo Pyrazin 1 Bound To The		3e-05
1p14_A	306	Crystal Structure Of A Catalytic-Loop Mutant Of The		3e-05
3bys_A	277	Co-Crystal Structure Of Lck And Aminopyrimidine Ami		3e-05
3mpm_A	267	Lck Complexed With A Pyrazolopyrimidine Length = 26		3e-05
1ir3_A	306	Phosphorylated Insulin Receptor Tyrosine Kinase In		3e-05
1rqq_A	306	Crystal Structure Of The Insulin Receptor Kinase In		3e-05
1i44_A	306	Crystallographic Studies Of An Activation Loop Muta		3e-05
3kxz_A	287	The Complex Crystal Structure Of Lck With A Probe M		3e-05
3kmm_A	288	Structure Of Human Lck Kinase With A Small Molecule		3e-05
2ofu_A	273	X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam		3e-05
2og8_A	265	Crystal Structure Of Aminoquinazoline 36 Bound To L		3e-05
3bym_A	272	X-Ray Co-Crystal Structure Aminobenzimidazole Triaz		3e-05
2of2_A	271	Crystal Structure Of Furanopyrimidine 8 Bound To Lc		3e-05
2ofv_A	277	Crystal Structure Of Aminoquinazoline 1 Bound To Lc		3e-05
3lck_A	271	The Kinase Domain Of Human Lymphocyte Kinase (Lck),		3e-05
4aw5_A	291	Complex Of The Ephb4 Kinase Domain With An Oxindole		3e-05
3ekk_A	307	Insulin Receptor Kinase Complexed With An Inhibitor		3e-05
3a2e_A	108	Crystal Structure Of Ginkbilobin-2, The Novel Antif		3e-05
2pl0_A	289	Lck Bound To Imatinib Length = 289		3e-05
1qpe_A	279	Structural Analysis Of The Lymphocyte-Specific Kina		4e-05
3eta_A	317	Kinase Domain Of Insulin Receptor Complexed With A		4e-05
2vwu_A	302	Ephb4 Kinase Domain Inhibitor Complex Length = 302		4e-05
1y57_A	452	Structure Of Unphosphorylated C-Src In Complex With		5e-05
1fmk_A	452	Crystal Structure Of Human Tyrosine-Protein Kinase		5e-05
3c4c_A	280	B-Raf Kinase In Complex With Plx4720 Length = 280		5e-05
3lmg_A	344	Crystal Structure Of The Erbb3 Kinase Domain In Com		6e-05
3kex_A	325	Crystal Structure Of The Catalytically Inactive Kin		7e-05
2h8h_A	535	Src Kinase In Complex With A Quinazoline Inhibitor		7e-05
4fk3_A	292	B-Raf Kinase V600e Oncogenic Mutant In Complex With		7e-05
2hen_A	286	Crystal Structure Of The Ephb2 Receptor Kinase Doma		7e-05
1ksw_A	452	Structure Of Human C-Src Tyrosine Kinase (Thr338gly		7e-05
2bdf_A	279	Src Kinase In Complex With Inhibitor Ap23451 Length		7e-05
3kul_B	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		7e-05
3kul_A	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		8e-05
1yi6_A	276	C-Term Tail Segment Of Human Tyrosine Kinase (258-5		8e-05
3e62_A	293	Fragment Based Discovery Of Jak-2 Inhibitors Length		8e-05
2w1i_A	326	Structure Determination Of Aurora Kinase In Complex		8e-05
1jpa_A	312	Crystal Structure Of Unphosphorylated Ephb2 Recepto		8e-05
3rvg_A	303	Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido		8e-05
3q32_A	301	Structure Of Janus Kinase 2 With A Pyrrolotriazine		8e-05
4aqc_A	301	Triazolopyridine-Based Inhibitor Of Janus Kinase 2		9e-05
4hge_A	300	Jak2 Kinase (Jh1 Domain) In Complex With Compound 8		9e-05
3ugc_A	295	Structural Basis Of Jak2 Inhibition By The Type Ii		9e-05
4bbe_A	298	Aminoalkylpyrimidine Inhibitor Complexes With Jak2		9e-05
2b7a_A	293	The Structural Basis Of Janus Kinase 2 Inhibition B		9e-05
4e4m_A	302	Jak2 Kinase (Jh1 Domain) In Complex With Compound 3		9e-05
3lpb_A	295	Crystal Structure Of Jak2 Complexed With A Potent 2		9e-05
3tjc_A	298	Co-Crystal Structure Of Jak2 With Thienopyridine 8		9e-05
2ptk_A	453	Chicken Src Tyrosine Kinase Length = 453		1e-04
3jy9_A	311	Janus Kinase 2 Inhibitors Length = 311		1e-04
3io7_A	313	2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel		1e-04
3og7_A	289	B-Raf Kinase V600e Oncogenic Mutant In Complex With		1e-04
1yoj_A	283	Crystal Structure Of Src Kinase Domain Length = 283		1e-04
3dqw_A	286	C-Src Kinase Domain Thr338ile Mutant In Complex Wit		1e-04
2jiv_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		1e-04
1yol_A	283	Crystal Structure Of Src Kinase Domain In Complex W		1e-04
3g6h_A	286	Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma		1e-04
3bel_A	315	X-Ray Structure Of Egfr In Complex With Oxime Inhib		1e-04
1xkk_A	352	Egfr Kinase Domain Complexed With A Quinazoline Inh		1e-04
3d7u_B	277	Structural Basis For The Recognition Of C-Src By It		1e-04
3u4w_A	275	Src In Complex With Dna-Templated Macrocyclic Inhib		1e-04
3geq_A	286	Structural Basis For The Chemical Rescue Of Src Kin		1e-04
3w2o_A	331	Egfr Kinase Domain T790m/l858r Mutant With Tak-285		1e-04
2oiq_A	286	Crystal Structure Of Chicken C-Src Kinase Domain In		1e-04
4hjo_A	337	Crystal Structure Of The Inactive Egfr Tyrosine Kin		1e-04
2jiu_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		1e-04
2rfd_A	324	Crystal Structure Of The Complex Between The Egfr K		1e-04
2j5f_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		2e-04
2jit_A	327	Crystal Structure Of Egfr Kinase Domain T790m Mutat		2e-04
4g5p_A	330	Crystal Structure Of Egfr Kinase T790m In Complex W		2e-04
3ika_A	331	Crystal Structure Of Egfr 696-1022 T790m Mutant Cov		2e-04
2itt_A	327	Crystal Structure Of Egfr Kinase Domain L858r Mutat		2e-04
2gs2_A	330	Crystal Structure Of The Active Egfr Kinase Domain		2e-04
4i23_A	329	Crystal Structure Of The Wild-type Egfr Kinase Doma		2e-04
4g5j_A	330	Crystal Structure Of Egfr Kinase In Complex With Bi		2e-04
2j5e_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		2e-04
4i24_A	329	Structure Of T790m Egfr Kinase Domain Co-crystalliz		2e-04
1m14_A	333	Tyrosine Kinase Domain From Epidermal Growth Factor		2e-04
4i1z_A	329	Crystal Structure Of The Monomeric (v948r) Form Of		2e-04
2gs7_A	330	Crystal Structure Of The Inactive Egfr Kinase Domai		2e-04
4i20_A	329	Crystal Structure Of Monomeric (v948r) Primary Onco		2e-04
3vjo_A	334	Crystal Structure Of The Wild-Type Egfr Kinase Doma		2e-04
4i21_A	329	Crystal Structure Of L858r + T790m Egfr Kinase Doma		2e-04
2eb3_A	334	Crystal Structure Of Mutated Egfr Kinase Domain (L8		2e-04
3lzb_A	327	Egfr Kinase Domain Complexed With An Imidazo[2,1-B]		2e-04
3svv_A	286	Crystal Structure Of T338c C-Src Covalently Bound T		2e-04
4h58_A	275	Braf In Complex With Compound 3 Length = 275		2e-04
2rei_A	318	Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep		2e-04
2fb8_A	281	Structure Of The B-Raf Kinase Domain Bound To Sb-59		2e-04
4dbn_A	284	Crystal Structure Of The Kinase Domain Of Human B-R		2e-04
3q96_A	282	B-Raf Kinase Domain In Complex With A Tetrahydronap		2e-04
2i0v_A	335	C-Fms Tyrosine Kinase In Complex With A Quinolone I		2e-04
2clq_A	295	Structure Of Mitogen-Activated Protein Kinase Kinas		2e-04
1uwj_A	276	The Complex Of Mutant V599e B-raf And Bay439006 Len		2e-04
3idp_A	300	B-Raf V600e Kinase Domain In Complex With An Aminoi		2e-04
3omv_A	307	Crystal Structure Of C-Raf (Raf-1) Length = 307		3e-04
2r2p_A	295	Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep		3e-04
3oez_A	286	Crystal Structure Of The L317i Mutant Of The Chicke		3e-04
3d4q_A	307	Pyrazole-Based Inhibitors Of B-Raf Kinase Length =		3e-04
4hzs_A	341	Crystal Structure Of Ack1 Kinase Domain With C-term		3e-04
3ii5_A	306	The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi		3e-04
3eqp_B	276	Crystal Structure Of Ack1 With Compound T95 Length		3e-04
1qpd_A	279	Structural Analysis Of The Lymphocyte-specific Kina		3e-04
4g9r_A	307	B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr		3e-04
4ewh_B	275	Co-Crystal Structure Of Ack1 With Inhibitor Length		3e-04
3vw6_A	269	Crystal Structure Of Human Apoptosis Signal-Regulat		3e-04
2xyu_A	285	Crystal Structure Of Epha4 Kinase Domain In Complex		3e-04
4id7_A	273	Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-		3e-04
1uwh_A	276	The Complex Of Wild Type B-Raf And Bay439006 Length		3e-04
2hel_A	306	Crystal Structure Of A Mutant Epha4 Kinase Domain (		3e-04
2y6m_A	291	Crystal Structure Of Epha4 Kinase Domain Length = 2		4e-04
4hzr_A	277	Crystal Structure Of Ack1 Kinase Domain Length = 27		4e-04
1u54_A	291	Crystal Structures Of The Phosphorylated And Unphos		4e-04
1u46_A	291	Crystal Structure Of The Unphosphorylated Kinase Do		4e-04
2qq7_A	286	Crystal Structure Of Drug Resistant Src Kinase Doma		4e-04
2pk9_A	317	Structure Of The Pho85-pho80 Cdk-cyclin Complex Of		4e-04
2i1m_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An		4e-04
3bea_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A P		5e-04
2oo8_X	317	Synthesis, Structural Analysis, And Sar Studies Of		5e-04
1fvr_A	327	Tie2 Kinase Domain Length = 327		5e-04
2bva_A	292	Crystal Structure Of The Human P21-Activated Kinase		5e-04
2hwo_A	286	Crystal Structure Of Src Kinase Domain In Complex W		6e-04
2wqb_A	324	Structure Of The Tie2 Kinase Domain In Complex With		6e-04
1vyw_A	309	Structure Of Cdk2CYCLIN A WITH PNU-292137 Length =		6e-04
2x4z_A	296	Crystal Structure Of The Human P21-Activated Kinase		6e-04
1o9u_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		6e-04
2q0n_A	301	Structure Of Human P21 Activating Kinase 4 (Pak4) I		6e-04
1h8f_A	352	Glycogen Synthase Kinase 3 Beta. Length = 352		6e-04
1uv5_A	350	Glycogen Synthase Kinase 3 Beta Complexed With 6-Br		7e-04
2x4f_A	373	The Crystal Structure Of The Human Myosin Light Cha		7e-04
2cdz_A	303	Crystal Structure Of The Human P21-Activated Kinase		7e-04
3lcd_A	329	Inhibitor Bound To A Dfg-In Structure Of The Kinase		8e-04
3gop_A	361	Crystal Structure Of The Egf Receptor Juxtamembrane		8e-04
2itn_A	327	Crystal Structure Of Egfr Kinase Domain G719s Mutat		8e-04
1e9h_A	297	Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex		9e-04

>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349

Iteration: 1
 Score = 95.5 bits (236), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 49/121 (40%), Positives = 76/121 (62%), Gaps = 2/121 (1%)
Query: 310 RKAKNKYNAVPEVNADNDITTLESLQFDFETIEVATNNFSTDNKLGEGGFGEVYKGVLPS 369
           +K ++ +  VP    D ++   +  +F    ++VA++NFS  N LG GGFG+VYKG L  
Sbjct: 3   KKPQDHFFDVP-AEEDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLAD 61
Query: 370 GQEIAVKRLSRSSGQGGQ-EFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKS 428
           G  +AVKRL     QGG+ +F+ EV +++   HRNL+RL GFC+   E++LVY ++ N S
Sbjct: 62  GTLVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGS 121
Query: 429 L 429
           +
Sbjct: 122 V 122

>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326

Iteration: 1
 Score = 91.3 bits (225), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 44/96 (45%), Positives = 64/96 (66%), Gaps = 1/96 (1%)
Query: 335 QFDFETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQ-EFKNEV 393
           +F    ++VA++NF   N LG GGFG+VYKG L  G  +AVKRL     QGG+ +F+ EV
Sbjct: 19  RFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEV 78
Query: 394 VLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSL 429
            +++   HRNL+RL GFC+   E++LVY ++ N S+
Sbjct: 79  EMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSV 114

>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 47/129 (36%), Positives = 76/129 (58%), Gaps = 1/129 (0%)
Query: 317 NAVPEVNADNDITTLESLQFDFETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVK 376
           N++ +  + + +   ES +     +E ATNNF     +G G FG+VYKGVL  G ++A+K
Sbjct: 10  NSINDALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALK 69
Query: 377 RLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQ 436
           R +  S QG +EF+ E+  ++  +H +LV L+GFC E  E IL+Y+++ N +L   LY  
Sbjct: 70  RRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGS 129
Query: 437 S-PKNNNNW 444
             P  + +W
Sbjct: 130 DLPTMSMSW 138

>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 47/129 (36%), Positives = 76/129 (58%), Gaps = 1/129 (0%)
Query: 317 NAVPEVNADNDITTLESLQFDFETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVK 376
           N++ +  + + +   ES +     +E ATNNF     +G G FG+VYKGVL  G ++A+K
Sbjct: 10  NSINDALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALK 69
Query: 377 RLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQ 436
           R +  S QG +EF+ E+  ++  +H +LV L+GFC E  E IL+Y+++ N +L   LY  
Sbjct: 70  RRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGS 129
Query: 437 S-PKNNNNW 444
             P  + +W
Sbjct: 130 DLPTMSMSW 138

>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301

Iteration: 1
 Score = 75.1 bits (183), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 44/104 (42%), Positives = 64/104 (61%), Gaps = 11/104 (10%)
Query: 336 FDFETIEVATNNFST------DNKLGEGGFGEVYKGVLPSGQEIAVKRLSR----SSGQG 385
           F F  ++  TNNF         NK+GEGGFG VYKG + +   +AVK+L+     ++ + 
Sbjct: 9   FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 67
Query: 386 GQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSL 429
            Q+F  E+ ++AK QH NLV LLGF  +G++  LVY ++PN SL
Sbjct: 68  KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSL 111

>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 75.1 bits (183), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 44/104 (42%), Positives = 64/104 (61%), Gaps = 11/104 (10%)
Query: 336 FDFETIEVATNNFST------DNKLGEGGFGEVYKGVLPSGQEIAVKRLSR----SSGQG 385
           F F  ++  TNNF         NK+GEGGFG VYKG + +   +AVK+L+     ++ + 
Sbjct: 15  FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 73
Query: 386 GQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSL 429
            Q+F  E+ ++AK QH NLV LLGF  +G++  LVY ++PN SL
Sbjct: 74  KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSL 117

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 75.1 bits (183), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 44/104 (42%), Positives = 64/104 (61%), Gaps = 11/104 (10%)
Query: 336 FDFETIEVATNNFST------DNKLGEGGFGEVYKGVLPSGQEIAVKRLSR----SSGQG 385
           F F  ++  TNNF         NK+GEGGFG VYKG + +   +AVK+L+     ++ + 
Sbjct: 15  FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 73
Query: 386 GQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSL 429
            Q+F  E+ ++AK QH NLV LLGF  +G++  LVY ++PN SL
Sbjct: 74  KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSL 117

>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298

Iteration: 1
 Score = 71.6 bits (174), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 44/104 (42%), Positives = 61/104 (58%), Gaps = 11/104 (10%)
Query: 336 FDFETIEVATNNFST------DNKLGEGGFGEVYKGVLPSGQEIAVKRLSR----SSGQG 385
           F F  ++  TNNF         NK GEGGFG VYKG + +   +AVK+L+     ++ + 
Sbjct: 6   FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 64
Query: 386 GQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSL 429
            Q+F  E+ + AK QH NLV LLGF  +G++  LVY + PN SL
Sbjct: 65  KQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSL 108

>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299

Iteration: 1
 Score = 65.1 bits (157), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 56/103 (54%), Gaps = 6/103 (5%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKG----VLPSGQEI--AVKRLSRSSGQGGQEFKNEVVL 395
            +  +N     +LGEG FG+V+      + P   +I  AVK L  +S    ++F  E  L
Sbjct: 9   HIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAEL 68
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSP 438
           +  LQH ++V+  G C+EG+  I+V+E++ +  L+ FL A  P
Sbjct: 69  LTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGP 111

>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 59/115 (51%), Gaps = 6/115 (5%)
Query: 342 EVATNNFSTDNKLGEGGFGEVY----KGVLPSGQE--IAVKRLSRSSGQGGQEFKNEVVL 395
            +   +     +LGEG FG+V+      +LP   +  +AVK L  +S    Q+F+ E  L
Sbjct: 14  HIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAEL 73
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPKNNNNWIGQDAT 450
           +  LQH+++VR  G C EG   ++V+E++ +  L+ FL +  P       G+D  
Sbjct: 74  LTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVA 128

>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 59/115 (51%), Gaps = 6/115 (5%)
Query: 342 EVATNNFSTDNKLGEGGFGEVY----KGVLPSGQE--IAVKRLSRSSGQGGQEFKNEVVL 395
            +   +     +LGEG FG+V+      +LP   +  +AVK L  +S    Q+F+ E  L
Sbjct: 8   HIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAEL 67
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPKNNNNWIGQDAT 450
           +  LQH+++VR  G C EG   ++V+E++ +  L+ FL +  P       G+D  
Sbjct: 68  LTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVA 122

>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 57/104 (54%), Gaps = 6/104 (5%)
Query: 353 KLGEGGFGEVY----KGVLPSGQE--IAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVR 406
           +LGEG FG+V+      +LP   +  +AVK L  +S    Q+F+ E  L+  LQH+++VR
Sbjct: 48  ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 107
Query: 407 LLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPKNNNNWIGQDAT 450
             G C EG   ++V+E++ +  L+ FL +  P       G+D  
Sbjct: 108 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVA 151

>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 35/105 (33%), Positives = 54/105 (51%), Gaps = 7/105 (6%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRLSR-SSGQGGQEFKNEVV 394
           EV   N +    LG G FGEVY+G +      PS  ++AVK L    S Q   +F  E +
Sbjct: 27  EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 86
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPK 439
           +++KL H+N+VR +G  L+   + ++ E +    L  FL    P+
Sbjct: 87  IISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPR 131

>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 35/105 (33%), Positives = 54/105 (51%), Gaps = 7/105 (6%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRLSR-SSGQGGQEFKNEVV 394
           EV   N +    LG G FGEVY+G +      PS  ++AVK L    S Q   +F  E +
Sbjct: 41  EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 100
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPK 439
           +++KL H+N+VR +G  L+   + ++ E +    L  FL    P+
Sbjct: 101 IISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPR 145

>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Piperidine-Carboxamide Inhibitor 2 Length = 327

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 7/105 (6%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRLSR-SSGQGGQEFKNEVV 394
           EV   N +    LG G FGEVY+G +      PS  ++AVK L    S Q   +F  E +
Sbjct: 27  EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 86
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPK 439
           +++K  H+N+VR +G  L+   + ++ E +    L  FL    P+
Sbjct: 87  IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPR 131

>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With A Piperidine-Carboxamide Inhibitor Length = 333

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 7/105 (6%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRLSR-SSGQGGQEFKNEVV 394
           EV   N +    LG G FGEVY+G +      PS  ++AVK L    S Q   +F  E +
Sbjct: 33  EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 92
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPK 439
           +++K  H+N+VR +G  L+   + ++ E +    L  FL    P+
Sbjct: 93  IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPR 137

>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 7/105 (6%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRLSR-SSGQGGQEFKNEVV 394
           EV   N +    LG G FGEVY+G +      PS  ++AVK L    S Q   +F  E +
Sbjct: 27  EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 86
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPK 439
           +++K  H+N+VR +G  L+   + ++ E +    L  FL    P+
Sbjct: 87  IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPR 131

>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In Complex With Crizotinib Length = 327

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 7/105 (6%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRLSR-SSGQGGQEFKNEVV 394
           EV   N +    LG G FGEVY+G +      PS  ++AVK L    S Q   +F  E +
Sbjct: 26  EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 85
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPK 439
           +++K  H+N+VR +G  L+   + ++ E +    L  FL    P+
Sbjct: 86  IISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPR 130

>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 7/105 (6%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRLSR-SSGQGGQEFKNEVV 394
           EV   N +    LG G FGEVY+G +      PS  ++AVK L    S Q   +F  E +
Sbjct: 41  EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 100
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPK 439
           +++K  H+N+VR +G  L+   + ++ E +    L  FL    P+
Sbjct: 101 IISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPR 145

>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Ch5424802 Length = 344

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 7/105 (6%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRLSR-SSGQGGQEFKNEVV 394
           EV   N +    LG G FGEVY+G +      PS  ++AVK L    S Q   +F  E +
Sbjct: 43  EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 102
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPK 439
           +++K  H+N+VR +G  L+   + ++ E +    L  FL    P+
Sbjct: 103 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPR 147

>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex With Nvp- Tae684 Length = 315

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 7/105 (6%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRLSR-SSGQGGQEFKNEVV 394
           EV   N +    LG G FGEVY+G +      PS  ++AVK L    S Q   +F  E +
Sbjct: 18  EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 77
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPK 439
           +++K  H+N+VR +G  L+   + ++ E +    L  FL    P+
Sbjct: 78  IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPR 122

>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 367

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 7/105 (6%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRLSR-SSGQGGQEFKNEVV 394
           EV   N +    LG G FGEVY+G +      PS  ++AVK L    S Q   +F  E +
Sbjct: 67  EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 126
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPK 439
           +++K  H+N+VR +G  L+   + ++ E +    L  FL    P+
Sbjct: 127 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPR 171

>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In Complex With Crizotinib (Pf-02341066) Length = 327

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 7/105 (6%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRLSR-SSGQGGQEFKNEVV 394
           EV   N +    LG G FGEVY+G +      PS  ++AVK L    S Q   +F  E +
Sbjct: 26  EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 85
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPK 439
           +++K  H+N+VR +G  L+   + ++ E +    L  FL    P+
Sbjct: 86  IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPR 130

>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Acyliminobenzimidazole Inhibitor 1 Length = 353

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 7/105 (6%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRLSR-SSGQGGQEFKNEVV 394
           EV   N +    LG G FGEVY+G +      PS  ++AVK L    S Q   +F  E +
Sbjct: 53  EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 112
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPK 439
           +++K  H+N+VR +G  L+   + ++ E +    L  FL    P+
Sbjct: 113 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPR 157

>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 344

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 7/105 (6%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRLSR-SSGQGGQEFKNEVV 394
           EV   N +    LG G FGEVY+G +      PS  ++AVK L    S Q   +F  E +
Sbjct: 44  EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 103
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPK 439
           +++K  H+N+VR +G  L+   + ++ E +    L  FL    P+
Sbjct: 104 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPR 148

>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 7/105 (6%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRLSRS-SGQGGQEFKNEVV 394
           EV   N +    LG G FGEVY+G +      PS  ++AVK L    S Q   +F  E +
Sbjct: 41  EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEAL 100
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPK 439
           +++K  H+N+VR +G  L+   + ++ E +    L  FL    P+
Sbjct: 101 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPR 145

>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into Receptor Autoregulation Length = 343

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/105 (33%), Positives = 55/105 (52%), Gaps = 7/105 (6%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYK----GVLPSGQ--EIAVKRLSRSSGQGGQ-EFKNEVV 394
           E   NN      +GEG FG V++    G+LP      +AVK L   +    Q +F+ E  
Sbjct: 43  EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAA 102
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPK 439
           L+A+  + N+V+LLG C  G+   L++E++    L+ FL + SP 
Sbjct: 103 LMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPH 147

>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain Length = 308

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 63/116 (54%), Gaps = 7/116 (6%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVL--PSG----QEIAVKRLS-RSSGQGGQEFKNEVV 394
           E++ +      +LGE  FG+VYKG L  P+     Q +A+K L  ++ G   +EF++E +
Sbjct: 22  EISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAM 81
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPKNNNNWIGQDAT 450
           L A+LQH N+V LLG   + +   +++ +  +  L  FL  +SP ++      D T
Sbjct: 82  LRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRT 137

>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2 Length = 289

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 63/116 (54%), Gaps = 7/116 (6%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVL--PSG----QEIAVKRLS-RSSGQGGQEFKNEVV 394
           E++ +      +LGE  FG+VYKG L  P+     Q +A+K L  ++ G   +EF++E +
Sbjct: 5   EISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAM 64
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPKNNNNWIGQDAT 450
           L A+LQH N+V LLG   + +   +++ +  +  L  FL  +SP ++      D T
Sbjct: 65  LRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRT 120

>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 55/103 (53%), Gaps = 6/103 (5%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKG----VLPSGQE--IAVKRLSRSSGQGGQEFKNEVVL 395
            +   +     +LGEG FG+V+      + P+  +  +AVK L   +    ++F+ E  L
Sbjct: 11  HIKRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAEL 70
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSP 438
           +  LQH ++V+  G C +G+  I+V+E++ +  L+ FL A  P
Sbjct: 71  LTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGP 113

>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With Lapatinib Length = 328

Iteration: 1
 Score = 55.8 bits (133), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 35/94 (37%), Positives = 55/94 (58%), Gaps = 9/94 (9%)
Query: 354 LGEGGFGEVYKGV-LPSGQ----EIAVKRLSRSSG-QGGQEFKNEVVLVAKLQHRNLVRL 407
           LG G FG VYKG+ +P G+     +A+K L+ ++G +   EF +E +++A + H +LVRL
Sbjct: 23  LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 82
Query: 408 LGFCLEGEEKILVYEFVPNKSLDYFLYAQSPKNN 441
           LG CL    + LV + +P+  L    Y    K+N
Sbjct: 83  LGVCLSPTIQ-LVTQLMPHGCL--LEYVHEHKDN 113

>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine Inhibitor Length = 321

Iteration: 1
 Score = 55.5 bits (132), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 35/94 (37%), Positives = 55/94 (58%), Gaps = 9/94 (9%)
Query: 354 LGEGGFGEVYKGV-LPSGQ----EIAVKRLSRSSG-QGGQEFKNEVVLVAKLQHRNLVRL 407
           LG G FG VYKG+ +P G+     +A+K L+ ++G +   EF +E +++A + H +LVRL
Sbjct: 46  LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 105
Query: 408 LGFCLEGEEKILVYEFVPNKSLDYFLYAQSPKNN 441
           LG CL    + LV + +P+  L    Y    K+N
Sbjct: 106 LGVCLSPTIQ-LVTQLMPHGCL--LEYVHEHKDN 136

>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKG--VLPSGQEIAVKRLSRSSG---QGGQEFKNEVVLV 396
           E+   N S D  +G G FGEV  G   LPS +EI+V   +   G   +  ++F  E  ++
Sbjct: 12  ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 71
Query: 397 AKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL 433
            +  H N++RL G   + +  ++V E++ N SLD FL
Sbjct: 72  GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL 108

>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKG--VLPSGQEIAVKRLSRSSG---QGGQEFKNEVVLV 396
           E+   N S D  +G G FGEV  G   LPS +EI+V   +   G   +  ++F  E  ++
Sbjct: 29  ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 88
Query: 397 AKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL 433
            +  H N++RL G   + +  ++V E++ N SLD FL
Sbjct: 89  GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL 125

>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKG--VLPSGQEIAVKRLSRSSG---QGGQEFKNEVVLV 396
           E+   N S D  +G G FGEV  G   LPS +EI+V   +   G   +  ++F  E  ++
Sbjct: 39  ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 98
Query: 397 AKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL 433
            +  H N++RL G   + +  ++V E++ N SLD FL
Sbjct: 99  GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL 135

>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKG--VLPSGQEIAVKRLSRSSG---QGGQEFKNEVVLV 396
           E+   N S D  +G G FGEV  G   LPS +EI+V   +   G   +  ++F  E  ++
Sbjct: 41  ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 397 AKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL 433
            +  H N++RL G   + +  ++V E++ N SLD FL
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL 137

>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKG--VLPSGQEIAVKRLSRSSG---QGGQEFKNEVVLV 396
           E+   N S D  +G G FGEV  G   LPS +EI+V   +   G   +  ++F  E  ++
Sbjct: 41  ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 397 AKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL 433
            +  H N++RL G   + +  ++V E++ N SLD FL
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL 137

>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKG--VLPSGQEIAVKRLSRSSG---QGGQEFKNEVVLV 396
           E+   N S D  +G G FGEV  G   LPS +EI+V   +   G   +  ++F  E  ++
Sbjct: 41  ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 397 AKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL 433
            +  H N++RL G   + +  ++V E++ N SLD FL
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL 137

>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKG--VLPSGQEIAVKRLSRSSG---QGGQEFKNEVVLV 396
           E+   N S D  +G G FGEV  G   LPS +EI+V   +   G   +  ++F  E  ++
Sbjct: 41  ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 397 AKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL 433
            +  H N++RL G   + +  ++V E++ N SLD FL
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL 137

>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKG--VLPSGQEIAVKRLSRSSG---QGGQEFKNEVVLV 396
           E+   N S D  +G G FGEV  G   LPS +EI+V   +   G   +  ++F  E  ++
Sbjct: 41  ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 397 AKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL 433
            +  H N++RL G   + +  ++V E++ N SLD FL
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL 137

>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKG--VLPSGQEIAVKRLSRSSG---QGGQEFKNEVVLV 396
           E+   N S D  +G G FGEV  G   LPS +EI+V   +   G   +  ++F  E  ++
Sbjct: 41  ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 397 AKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL 433
            +  H N++RL G   + +  ++V E++ N SLD FL
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL 137

>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKG--VLPSGQEIAVKRLSRSSG---QGGQEFKNEVVLV 396
           E+   N S D  +G G FGEV  G   LPS +EI+V   +   G   +  ++F  E  ++
Sbjct: 41  ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 397 AKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL 433
            +  H N++RL G   + +  ++V E++ N SLD FL
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL 137

>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 51/97 (52%), Gaps = 5/97 (5%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKG--VLPSGQEIAVKRLSRSSG---QGGQEFKNEVVLV 396
           E+   N S D  +G G FGEV  G   LPS +EI+V   +   G   +  ++F  E  ++
Sbjct: 12  ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 71
Query: 397 AKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL 433
            +  H N++RL G   + +  ++V E + N SLD FL
Sbjct: 72  GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL 108

>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 51/97 (52%), Gaps = 5/97 (5%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKG--VLPSGQEIAVKRLSRSSG---QGGQEFKNEVVLV 396
           E+   N S D  +G G FGEV  G   LPS +EI+V   +   G   +  ++F  E  ++
Sbjct: 41  ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 397 AKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL 433
            +  H N++RL G   + +  ++V E + N SLD FL
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL 137

>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 54/97 (55%), Gaps = 2/97 (2%)
Query: 329 TTLESLQFDFETIEVATNNFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSRSSGQGGQ 387
           T+++    +++  E+   + +  +KLG G +GEVY+GV       +AVK L   + +  +
Sbjct: 1   TSMDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-E 59
Query: 388 EFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFV 424
           EF  E  ++ +++H NLV+LLG C       ++ EF+
Sbjct: 60  EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFM 96

>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 51/97 (52%), Gaps = 5/97 (5%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKG--VLPSGQEIAVKRLSRSSG---QGGQEFKNEVVLV 396
           E+   N S D  +G G FGEV  G   LPS +EI+V   +   G   +  ++F  E  ++
Sbjct: 41  ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 397 AKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL 433
            +  H N++RL G   + +  ++V E + N SLD FL
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL 137

>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277

Iteration: 1
 Score = 52.4 bits (124), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 54/97 (55%), Gaps = 2/97 (2%)
Query: 329 TTLESLQFDFETIEVATNNFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSRSSGQGGQ 387
           T+++    +++  E+   + +  +KLG G +GEVY+GV       +AVK L   + +  +
Sbjct: 1   TSMDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-E 59
Query: 388 EFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFV 424
           EF  E  ++ +++H NLV+LLG C       ++ EF+
Sbjct: 60  EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 96

>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277

Iteration: 1
 Score = 51.6 bits (122), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Query: 337 DFETIEVATNNFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSRSSGQGGQEFKNEVVL 395
           +++  E+   + +  +KLG G +GEVY+GV       +AVK L   + +  +EF  E  +
Sbjct: 8   NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAV 66
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFV 424
           + +++H NLV+LLG C       ++ EF+
Sbjct: 67  MKEIKHPNLVQLLGVCTREPPFYIITEFM 95

>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270

Iteration: 1
 Score = 51.6 bits (122), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 53/98 (54%), Gaps = 3/98 (3%)
Query: 337 DFETIEVATNNFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSRSSGQGGQEFKNEVVL 395
           +++  E+   + +  +KLG G +GEVY+GV       +AVK L   + +  +EF  E  +
Sbjct: 4   NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAV 62
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVP-NKSLDYF 432
           + +++H NLV+LLG C       ++ EF+     LDY 
Sbjct: 63  MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 100

>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278

Iteration: 1
 Score = 51.6 bits (122), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Query: 337 DFETIEVATNNFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSRSSGQGGQEFKNEVVL 395
           +++  E+   + +  +KLG G +GEVY+GV       +AVK L   + +  +EF  E  +
Sbjct: 9   NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAV 67
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFV 424
           + +++H NLV+LLG C       ++ EF+
Sbjct: 68  MKEIKHPNLVQLLGVCTREPPFYIITEFM 96

>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 55/104 (52%), Gaps = 4/104 (3%)
Query: 332 ESLQFD-FETIEVATNNFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSRSSGQGGQEF 389
           E+L F   +  E+   + +  +KLG G +GEVY GV       +AVK L   + +  +EF
Sbjct: 17  ENLYFQSMDKWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEV-EEF 75
Query: 390 KNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVP-NKSLDYF 432
             E  ++ +++H NLV+LLG C       +V E++P    LDY 
Sbjct: 76  LKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYL 119

>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 53/98 (54%), Gaps = 3/98 (3%)
Query: 337 DFETIEVATNNFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSRSSGQGGQEFKNEVVL 395
           +++  E+   + +  +KLG G +GEVY+GV       +AVK L   + +  +EF  E  +
Sbjct: 4   NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAV 62
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVP-NKSLDYF 432
           + +++H NLV+LLG C       ++ EF+     LDY 
Sbjct: 63  MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 100

>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 53/96 (55%), Gaps = 2/96 (2%)
Query: 330 TLESLQFDFETIEVATNNFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSRSSGQGGQE 388
           T+  +  +++  E+   + +  +KLG G +GEVY+GV       +AVK L   + +  +E
Sbjct: 204 TIYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EE 262
Query: 389 FKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFV 424
           F  E  ++ +++H NLV+LLG C       ++ EF+
Sbjct: 263 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 298

>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Query: 337 DFETIEVATNNFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSRSSGQGGQEFKNEVVL 395
           +++  E+   + +  +KLG G +GEVY+GV       +AVK L   + +  +EF  E  +
Sbjct: 5   NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAV 63
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFV 424
           + +++H NLV+LLG C       ++ EF+
Sbjct: 64  MKEIKHPNLVQLLGVCTREPPFYIIIEFM 92

>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 53/98 (54%), Gaps = 3/98 (3%)
Query: 337 DFETIEVATNNFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSRSSGQGGQEFKNEVVL 395
           +++  E+   + +  +KLG G +GEVY+GV       +AVK L   + +  +EF  E  +
Sbjct: 4   NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAV 62
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVP-NKSLDYF 432
           + +++H NLV+LLG C       ++ EF+     LDY 
Sbjct: 63  MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL 100

>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 53/98 (54%), Gaps = 3/98 (3%)
Query: 337 DFETIEVATNNFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSRSSGQGGQEFKNEVVL 395
           +++  E+   + +  +KLG G +GEVY+GV       +AVK L   + +  +EF  E  +
Sbjct: 4   NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAV 62
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVP-NKSLDYF 432
           + +++H NLV+LLG C       ++ EF+     LDY 
Sbjct: 63  MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL 100

>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 53/98 (54%), Gaps = 3/98 (3%)
Query: 337 DFETIEVATNNFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSRSSGQGGQEFKNEVVL 395
           +++  E+   + +  +KLG G +GEVY+GV       +AVK L   + +  +EF  E  +
Sbjct: 9   NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAV 67
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVP-NKSLDYF 432
           + +++H NLV+LLG C       ++ EF+     LDY 
Sbjct: 68  MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 105

>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Query: 337 DFETIEVATNNFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSRSSGQGGQEFKNEVVL 395
           +++  E+   + +  +KLG G +GEVY+GV       +AVK L   + +  +EF  E  +
Sbjct: 5   NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAV 63
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFV 424
           + +++H NLV+LLG C       ++ EF+
Sbjct: 64  MKEIKHPNLVQLLGVCTREPPFYIITEFM 92

>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Query: 337 DFETIEVATNNFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSRSSGQGGQEFKNEVVL 395
           +++  E+   + +  +KLG G +GEVY+GV       +AVK L   + +  +EF  E  +
Sbjct: 6   NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAV 64
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFV 424
           + +++H NLV+LLG C       ++ EF+
Sbjct: 65  MKEIKHPNLVQLLGVCTREPPFYIITEFM 93

>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 53/98 (54%), Gaps = 3/98 (3%)
Query: 337 DFETIEVATNNFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSRSSGQGGQEFKNEVVL 395
           +++  E+   + +  +KLG G +GEVY+GV       +AVK L   + +  +EF  E  +
Sbjct: 6   NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAV 64
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVP-NKSLDYF 432
           + +++H NLV+LLG C       ++ EF+     LDY 
Sbjct: 65  MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 102

>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 53/98 (54%), Gaps = 3/98 (3%)
Query: 337 DFETIEVATNNFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSRSSGQGGQEFKNEVVL 395
           +++  E+   + +  +KLG G +GEVY+GV       +AVK L   + +  +EF  E  +
Sbjct: 4   NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAV 62
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVP-NKSLDYF 432
           + +++H NLV+LLG C       ++ EF+     LDY 
Sbjct: 63  MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 100

>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 53/98 (54%), Gaps = 3/98 (3%)
Query: 337 DFETIEVATNNFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSRSSGQGGQEFKNEVVL 395
           +++  E+   + +  +KLG G +GEVY+GV       +AVK L   + +  +EF  E  +
Sbjct: 9   NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAV 67
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVP-NKSLDYF 432
           + +++H NLV+LLG C       ++ EF+     LDY 
Sbjct: 68  MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 105

>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 53/98 (54%), Gaps = 3/98 (3%)
Query: 337 DFETIEVATNNFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSRSSGQGGQEFKNEVVL 395
           +++  E+   + +  +KLG G +GEVY+GV       +AVK L   + +  +EF  E  +
Sbjct: 6   NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAV 64
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVP-NKSLDYF 432
           + +++H NLV+LLG C       ++ EF+     LDY 
Sbjct: 65  MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 102

>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Query: 337 DFETIEVATNNFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSRSSGQGGQEFKNEVVL 395
           +++  E+   + +  +KLG G +GEVY+GV       +AVK L   + +  +EF  E  +
Sbjct: 250 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAV 308
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFV 424
           + +++H NLV+LLG C       ++ EF+
Sbjct: 309 MKEIKHPNLVQLLGVCTREPPFYIITEFM 337

>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 53/98 (54%), Gaps = 3/98 (3%)
Query: 337 DFETIEVATNNFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSRSSGQGGQEFKNEVVL 395
           +++  E+   + +  +KLG G +GEVY+GV       +AVK L   + +  +EF  E  +
Sbjct: 4   NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAV 62
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVP-NKSLDYF 432
           + +++H NLV+LLG C       ++ EF+     LDY 
Sbjct: 63  MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 100

>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 53/98 (54%), Gaps = 3/98 (3%)
Query: 337 DFETIEVATNNFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSRSSGQGGQEFKNEVVL 395
           +++  E+   + +  +KLG G +GEVY+GV       +AVK L   + +  +EF  E  +
Sbjct: 17  NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAV 75
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVP-NKSLDYF 432
           + +++H NLV+LLG C       ++ EF+     LDY 
Sbjct: 76  MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 113

>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQ 400
           E+   + +  +KLG G FGEVY+GV       +AVK L   + +  +EF  E  ++ +++
Sbjct: 7   EMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIK 65
Query: 401 HRNLVRLLGFCLEGEEKILVYEFVP-NKSLDYF 432
           H NLV+LLG C       ++ EF+     LDY 
Sbjct: 66  HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 98

>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo Form) Length = 289

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 49/88 (55%), Gaps = 8/88 (9%)
Query: 354 LGEGGFGEVYKGVLPS----GQ----EIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLV 405
           LG+G F +++KGV       GQ    E+ +K L ++     + F     +++KL H++LV
Sbjct: 16  LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 406 RLLGFCLEGEEKILVYEFVPNKSLDYFL 433
              G C+ G+E ILV EFV   SLD +L
Sbjct: 76  LNYGVCVCGDENILVQEFVKFGSLDTYL 103

>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A Benzimidazole Inhibitor Length = 307

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 57/109 (52%), Gaps = 7/109 (6%)
Query: 342 EVATNNFSTDNKLGEGGFGEVY----KGVLPSGQE--IAVKRLSRSSGQGGQ-EFKNEVV 394
           EVA    +   +LG+G FG VY    KGV+    E  +A+K ++ ++    + EF NE  
Sbjct: 14  EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 73
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPKNNNN 443
           ++ +    ++VRLLG   +G+  +++ E +    L  +L +  P+  NN
Sbjct: 74  VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENN 122

>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQ 400
           E+   + +  +KLG G +GEVY+GV       +AVK L   + +  +EF  E  ++ +++
Sbjct: 7   EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIK 65
Query: 401 HRNLVRLLGFCLEGEEKILVYEFVP-NKSLDYF 432
           H NLV+LLG C       ++ EF+     LDY 
Sbjct: 66  HPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL 98

>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor (Igf-1r-Wt) Complex With Bms-754807 [1-(4-((5-Cyclopropyl- 1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2, 4]triazin-2-Yl)-N- (6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide] Length = 315

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 57/109 (52%), Gaps = 7/109 (6%)
Query: 342 EVATNNFSTDNKLGEGGFGEVY----KGVLPSGQE--IAVKRLSRSSGQGGQ-EFKNEVV 394
           EVA    +   +LG+G FG VY    KGV+    E  +A+K ++ ++    + EF NE  
Sbjct: 14  EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 73
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPKNNNN 443
           ++ +    ++VRLLG   +G+  +++ E +    L  +L +  P+  NN
Sbjct: 74  VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENN 122

>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex With An Hydantoin Inhibitor Length = 305

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 57/109 (52%), Gaps = 7/109 (6%)
Query: 342 EVATNNFSTDNKLGEGGFGEVY----KGVLPSGQE--IAVKRLSRSSGQGGQ-EFKNEVV 394
           EVA    +   +LG+G FG VY    KGV+    E  +A+K ++ ++    + EF NE  
Sbjct: 12  EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 71
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPKNNNN 443
           ++ +    ++VRLLG   +G+  +++ E +    L  +L +  P+  NN
Sbjct: 72  VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENN 120

>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant V617f (Mg- Atp-Bound Form) Length = 289

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 8/88 (9%)
Query: 354 LGEGGFGEVYKGVLPS----GQ----EIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLV 405
           LG+G F +++KGV       GQ    E+ +K L ++     + F     +++KL H++LV
Sbjct: 16  LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 406 RLLGFCLEGEEKILVYEFVPNKSLDYFL 433
              G C  G+E ILV EFV   SLD +L
Sbjct: 76  LNYGVCFCGDENILVQEFVKFGSLDTYL 103

>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor Kinase Length = 299

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 57/109 (52%), Gaps = 7/109 (6%)
Query: 342 EVATNNFSTDNKLGEGGFGEVY----KGVLPSGQE--IAVKRLSRSSGQGGQ-EFKNEVV 394
           EVA    +   +LG+G FG VY    KGV+    E  +A+K ++ ++    + EF NE  
Sbjct: 6   EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 65
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPKNNNN 443
           ++ +    ++VRLLG   +G+  +++ E +    L  +L +  P+  NN
Sbjct: 66  VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENN 114

>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And Isoquinolinedione Inhibitor Length = 308

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 57/109 (52%), Gaps = 7/109 (6%)
Query: 342 EVATNNFSTDNKLGEGGFGEVY----KGVLPSGQE--IAVKRLSRSSGQGGQ-EFKNEVV 394
           EVA    +   +LG+G FG VY    KGV+    E  +A+K ++ ++    + EF NE  
Sbjct: 15  EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 74
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPKNNNN 443
           ++ +    ++VRLLG   +G+  +++ E +    L  +L +  P+  NN
Sbjct: 75  VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENN 123

>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain Length = 308

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 57/109 (52%), Gaps = 7/109 (6%)
Query: 342 EVATNNFSTDNKLGEGGFGEVY----KGVLPSGQE--IAVKRLSRSSGQGGQ-EFKNEVV 394
           EVA    +   +LG+G FG VY    KGV+    E  +A+K ++ ++    + EF NE  
Sbjct: 15  EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 74
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPKNNNN 443
           ++ +    ++VRLLG   +G+  +++ E +    L  +L +  P+  NN
Sbjct: 75  VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENN 123

>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain (2p) In Complex With A Bis-Azaindole Inhibitor Length = 336

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 57/109 (52%), Gaps = 7/109 (6%)
Query: 342 EVATNNFSTDNKLGEGGFGEVY----KGVLPSGQE--IAVKRLSRSSGQGGQ-EFKNEVV 394
           EVA    +   +LG+G FG VY    KGV+    E  +A+K ++ ++    + EF NE  
Sbjct: 43  EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 102
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPKNNNN 443
           ++ +    ++VRLLG   +G+  +++ E +    L  +L +  P+  NN
Sbjct: 103 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENN 151

>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1 Receptor Kinase In Complex With Pqip Length = 301

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 57/109 (52%), Gaps = 7/109 (6%)
Query: 342 EVATNNFSTDNKLGEGGFGEVY----KGVLPSGQE--IAVKRLSRSSGQGGQ-EFKNEVV 394
           EVA    +   +LG+G FG VY    KGV+    E  +A+K ++ ++    + EF NE  
Sbjct: 8   EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 67
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPKNNNN 443
           ++ +    ++VRLLG   +G+  +++ E +    L  +L +  P+  NN
Sbjct: 68  VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENN 116

>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth Factor-1 Receptor Kinase Domain Length = 322

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 57/109 (52%), Gaps = 7/109 (6%)
Query: 342 EVATNNFSTDNKLGEGGFGEVY----KGVLPSGQE--IAVKRLSRSSGQGGQ-EFKNEVV 394
           EVA    +   +LG+G FG VY    KGV+    E  +A+K ++ ++    + EF NE  
Sbjct: 21  EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 80
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPKNNNN 443
           ++ +    ++VRLLG   +G+  +++ E +    L  +L +  P+  NN
Sbjct: 81  VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENN 129

>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine 8 Length = 301

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 57/109 (52%), Gaps = 7/109 (6%)
Query: 342 EVATNNFSTDNKLGEGGFGEVY----KGVLPSGQE--IAVKRLSRSSGQGGQ-EFKNEVV 394
           EVA    +   +LG+G FG VY    KGV+    E  +A+K ++ ++    + EF NE  
Sbjct: 8   EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 67
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPKNNNN 443
           ++ +    ++VRLLG   +G+  +++ E +    L  +L +  P+  NN
Sbjct: 68  VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENN 116

>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 352 NKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFC 411
            ++G G FG V+ G   +  ++A+K + R      ++F  E  ++ KL H  LV+L G C
Sbjct: 11  QEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 69
Query: 412 LEGEEKILVYEFVPNKSLDYFLYAQ 436
           LE     LV+EF+ +  L  +L  Q
Sbjct: 70  LEQAPICLVFEFMEHGCLSDYLRTQ 94

>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 7/117 (5%)
Query: 324 ADNDITTLESLQF----DFETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLS 379
           +D DI T E+L F    D + +++   + +   K+G G FG V++     G ++AVK L 
Sbjct: 11  SDYDIPTTENLYFQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILM 69
Query: 380 RSSGQGGQ--EFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLY 434
                  +  EF  EV ++ +L+H N+V  +G   +     +V E++   SL   L+
Sbjct: 70  EQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLH 126

>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 49/91 (53%), Gaps = 10/91 (10%)
Query: 343 VATNNFSTDNKLGEGGFGEVYKGVLPSGQEI-AVKRLSRSSGQGG-------QEFKNEVV 394
           +A N    + ++G+GGFG V+KG L   + + A+K L     +G        QEF+ EV 
Sbjct: 16  LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVP 425
           +++ L H N+V+L G  L      +V EFVP
Sbjct: 76  IMSNLNHPNIVKLYG--LMHNPPRMVMEFVP 104

>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 352 NKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFC 411
            ++G G FG V+ G   +  ++A+K + R      ++F  E  ++ KL H  LV+L G C
Sbjct: 13  QEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 71
Query: 412 LEGEEKILVYEFVPNKSLDYFLYAQ 436
           LE     LV+EF+ +  L  +L  Q
Sbjct: 72  LEQAPICLVFEFMEHGCLSDYLRTQ 96

>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 352 NKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFC 411
            ++G G FG V+ G   +  ++A+K + R      ++F  E  ++ KL H  LV+L G C
Sbjct: 13  QEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 71
Query: 412 LEGEEKILVYEFVPNKSLDYFLYAQ 436
           LE     LV+EF+ +  L  +L  Q
Sbjct: 72  LEQAPICLVFEFMEHGCLSDYLRTQ 96

>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQ 400
           E+   + +  +KLG G +GEVY+GV       +AVK L   + +  +EF  E  ++ +++
Sbjct: 7   EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIK 65
Query: 401 HRNLVRLLGFCLEGEEKILVYEFVP-NKSLDYF 432
           H NLV+LLG C       ++ EF+     LDY 
Sbjct: 66  HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 98

>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 49/91 (53%), Gaps = 10/91 (10%)
Query: 343 VATNNFSTDNKLGEGGFGEVYKGVLPSGQEI-AVKRLSRSSGQGG-------QEFKNEVV 394
           +A N    + ++G+GGFG V+KG L   + + A+K L     +G        QEF+ EV 
Sbjct: 16  LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVP 425
           +++ L H N+V+L G  L      +V EFVP
Sbjct: 76  IMSNLNHPNIVKLYG--LMHNPPRMVMEFVP 104

>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 49/91 (53%), Gaps = 10/91 (10%)
Query: 343 VATNNFSTDNKLGEGGFGEVYKGVLPSGQEI-AVKRLSRSSGQGG-------QEFKNEVV 394
           +A N    + ++G+GGFG V+KG L   + + A+K L     +G        QEF+ EV 
Sbjct: 16  LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVP 425
           +++ L H N+V+L G  L      +V EFVP
Sbjct: 76  IMSNLNHPNIVKLYG--LMHNPPRMVMEFVP 104

>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 7/117 (5%)
Query: 324 ADNDITTLESLQF----DFETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLS 379
           +D DI T E+L F    D + +++   + +   K+G G FG V++     G ++AVK L 
Sbjct: 11  SDYDIPTTENLYFQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILM 69
Query: 380 RSSGQGGQ--EFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLY 434
                  +  EF  EV ++ +L+H N+V  +G   +     +V E++   SL   L+
Sbjct: 70  EQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLH 126

>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 352 NKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFC 411
            ++G G FG V+ G   +  ++A+K + R      ++F  E  ++ KL H  LV+L G C
Sbjct: 16  QEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 74
Query: 412 LEGEEKILVYEFVPNKSLDYFLYAQ 436
           LE     LV+EF+ +  L  +L  Q
Sbjct: 75  LEQAPICLVFEFMEHGCLSDYLRTQ 99

>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 6/100 (6%)
Query: 340 TIEVATNNFSTDNKLGEGGFGEVYKGVLP--SGQE---IAVKRLSRSSGQGGQ-EFKNEV 393
           T E+  +  +    +G G FGEVYKG+L   SG++   +A+K L     +  + +F  E 
Sbjct: 38  TTEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEA 97
Query: 394 VLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL 433
            ++ +  H N++RL G   + +  +++ E++ N +LD FL
Sbjct: 98  GIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFL 137

>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine Kinase Length = 277

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 6/96 (6%)
Query: 343 VATNNFSTDNKLGEGGFGEVYKGVLP--SGQEI--AVKRLSRSSGQGGQE-FKNEVVLVA 397
           +A  +   +  LGEG FGEVY+GV     G++I  AVK   +      +E F +E V++ 
Sbjct: 5   IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMK 64
Query: 398 KLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL 433
            L H ++V+L+G  +E E   ++ E  P   L ++L
Sbjct: 65  NLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYL 99

>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1 Length = 304

Iteration: 1
 Score = 48.9 bits (115), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 56/109 (51%), Gaps = 7/109 (6%)
Query: 342 EVATNNFSTDNKLGEGGFGEVY----KGVLPSGQE--IAVKRLSRSSGQGGQ-EFKNEVV 394
           EVA    +   +LG+G FG VY    KGV+    E  +A+K ++ ++    + EF NE  
Sbjct: 11  EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 70
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPKNNNN 443
           ++ +    ++VRLLG   +G+  +++ E +    L  +L +  P   NN
Sbjct: 71  VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANN 119

>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a Length = 293

Iteration: 1
 Score = 48.9 bits (115), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 6/96 (6%)
Query: 343 VATNNFSTDNKLGEGGFGEVYKGVLP--SGQEI--AVKRLSRSSGQGGQE-FKNEVVLVA 397
           +A  +   +  LGEG FGEVY+GV     G++I  AVK   +      +E F +E V++ 
Sbjct: 21  IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMK 80
Query: 398 KLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL 433
            L H ++V+L+G  +E E   ++ E  P   L ++L
Sbjct: 81  NLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYL 115

>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279

Iteration: 1
 Score = 48.9 bits (115), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
           E+   +     KLG G FGEV+ G   +  ++AVK L +      Q F  E  L+  LQH
Sbjct: 8   EIPRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQH 66
Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL 433
             LVRL     + E   ++ EF+   SL  FL
Sbjct: 67  DKLVRLYAVVTKEEPIYIITEFMAKGSLLDFL 98

>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine Kinase 2 Beta (ptk2b) Length = 281

Iteration: 1
 Score = 48.9 bits (115), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 6/96 (6%)
Query: 343 VATNNFSTDNKLGEGGFGEVYKGVLP--SGQEI--AVKRLSRSSGQGGQE-FKNEVVLVA 397
           +A  +   +  LGEG FGEVY+GV     G++I  AVK   +      +E F +E V++ 
Sbjct: 9   IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMK 68
Query: 398 KLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL 433
            L H ++V+L+G  +E E   ++ E  P   L ++L
Sbjct: 69  NLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYL 103

>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a Resolution. Length = 322

Iteration: 1
 Score = 48.9 bits (115), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 56/109 (51%), Gaps = 7/109 (6%)
Query: 342 EVATNNFSTDNKLGEGGFGEVY----KGVLPSGQE--IAVKRLSRSSGQGGQ-EFKNEVV 394
           EVA    +   +LG+G FG VY    KGV+    E  +A+K ++ ++    + EF NE  
Sbjct: 21  EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 80
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPKNNNN 443
           ++ +    ++VRLLG   +G+  +++ E +    L  +L +  P   NN
Sbjct: 81  VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANN 129

>pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286

Iteration: 1
 Score = 48.5 bits (114), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 1/98 (1%)
Query: 336 FDFETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVL 395
           +D +  E+   +     +LG G FGEV+ G   +  ++AVK L +      Q F  E  L
Sbjct: 3   WDKDAWEIPRESIKLVKRLGAGQFGEVWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANL 61
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL 433
           +  LQH  LVRL       E   ++ E++   SL  FL
Sbjct: 62  MKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFL 99

>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein Kina Length = 313

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Query: 332 ESLQFDFETIEVATNNFSTDNKLGEGGFGEVYKGVLP----SGQEIAVK--RLSRSSGQG 385
           E LQ   E + +  N       LGEG FG V +G L     +  ++AVK  +L  SS + 
Sbjct: 20  EELQNKLEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQRE 79
Query: 386 GQEFKNEVVLVAKLQHRNLVRLLGFCLE 413
            +EF +E   +    H N++RLLG C+E
Sbjct: 80  IEEFLSEAACMKDFSHPNVIRLLGVCIE 107

>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia Length = 329

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 5/93 (5%)
Query: 344 ATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRL---SRSSGQGGQEFKNEVVLVAKL 399
           + + +    KLGEG +GEVYK +   + + +A+KR+       G  G   + EV L+ +L
Sbjct: 32  SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIR-EVSLLKEL 90
Query: 400 QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYF 432
           QHRN++ L           L++E+  N    Y 
Sbjct: 91  QHRNIIELKSVIHHNHRLHLIFEYAENDLKKYM 123

>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes Length = 290

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 12/98 (12%)
Query: 354 LGEGGFGEVYKGVLP-----SGQEIAVKRLS-RSSGQGGQEFKNEVVLVAKLQHRNLVRL 407
           LGEG FG+V           +G+++AVK L   S G    + K E+ ++  L H N+V+ 
Sbjct: 17  LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 408 LGFCLE--GEEKILVYEFVPNKSLDYFLYAQSPKNNNN 443
            G C E  G    L+ EF+P+ SL  +L    PKN N 
Sbjct: 77  KGICTEDGGNGIKLIMEFLPSGSLKEYL----PKNKNK 110

>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 12/98 (12%)
Query: 354 LGEGGFGEVYKGVLP-----SGQEIAVKRLS-RSSGQGGQEFKNEVVLVAKLQHRNLVRL 407
           LGEG FG+V           +G+++AVK L   S G    + K E+ ++  L H N+V+ 
Sbjct: 29  LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 408 LGFCLE--GEEKILVYEFVPNKSLDYFLYAQSPKNNNN 443
            G C E  G    L+ EF+P+ SL  +L    PKN N 
Sbjct: 89  KGICTEDGGNGIKLIMEFLPSGSLKEYL----PKNKNK 122

>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Query: 352 NKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFC 411
            ++G G FG V+ G   +  ++A+K + R      ++F  E  ++ KL H  LV+L G C
Sbjct: 14  QEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 72
Query: 412 LEGEEKILVYEFVPNKSLDYFLYAQ 436
           LE     LV EF+ +  L  +L  Q
Sbjct: 73  LEQAPICLVTEFMEHGCLSDYLRTQ 97

>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Query: 352 NKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFC 411
            ++G G FG V+ G   +  ++A+K +   S     +F  E  ++ KL H  LV+L G C
Sbjct: 33  QEIGSGQFGLVHLGYWLNKDKVAIKTIKEGS-MSEDDFIEEAEVMMKLSHPKLVQLYGVC 91
Query: 412 LEGEEKILVYEFVPNKSLDYFLYAQ 436
           LE     LV+EF+ +  L  +L  Q
Sbjct: 92  LEQAPICLVFEFMEHGCLSDYLRTQ 116

>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 53/94 (56%), Gaps = 7/94 (7%)
Query: 353 KLGEGGFGEV----YKGVLP-SGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRL 407
           +LG+G FG V    Y  +   +G+ +AVK+L  S+ +  ++F+ E+ ++  LQH N+V+ 
Sbjct: 20  QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 408 LGFCLEGEEK--ILVYEFVPNKSLDYFLYAQSPK 439
            G C     +   L+ E++P  SL  +L A + +
Sbjct: 80  KGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAER 113

>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 51/115 (44%), Gaps = 7/115 (6%)
Query: 341 IEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSS----GQGGQEFKNEVVLV 396
           +E+     + +  +G GGFG+VY+     G E+AVK           Q  +  + E  L 
Sbjct: 2   LEIDFAELTLEEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLF 60
Query: 397 AKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQ--SPKNNNNWIGQDA 449
           A L+H N++ L G CL+     LV EF     L+  L  +   P    NW  Q A
Sbjct: 61  AMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQIA 115

>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 51/94 (54%), Gaps = 7/94 (7%)
Query: 353 KLGEGGFGEV----YKGVLP-SGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRL 407
           +LG+G FG V    Y  +   +G+ +AVK+L  S+ +  ++F+ E+ ++  LQH N+V+ 
Sbjct: 20  QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 408 LGFCLEGEEK--ILVYEFVPNKSLDYFLYAQSPK 439
            G C     +   L+ EF+P  SL  +L     +
Sbjct: 80  KGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKER 113

>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2- Yl]amino}phenyl)acetic Acid Length = 303

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 57/109 (52%), Gaps = 7/109 (6%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKG----VLPSGQE--IAVKRLSRSSGQGGQ-EFKNEVV 394
           EV+    +   +LG+G FG VY+G    ++    E  +AVK ++ S+    + EF NE  
Sbjct: 10  EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 69
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPKNNNN 443
           ++      ++VRLLG   +G+  ++V E + +  L  +L +  P+  NN
Sbjct: 70  VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENN 118

>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Human Insulin Receptor Length = 306

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 57/109 (52%), Gaps = 7/109 (6%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKG----VLPSGQE--IAVKRLSRSSGQGGQ-EFKNEVV 394
           EV+    +   +LG+G FG VY+G    ++    E  +AVK ++ S+    + EF NE  
Sbjct: 13  EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 72
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPKNNNN 443
           ++      ++VRLLG   +G+  ++V E + +  L  +L +  P+  NN
Sbjct: 73  VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENN 121

>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 46/96 (47%), Gaps = 2/96 (2%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
           EV         +LG G FGEV+ G      ++AVK L + S      F  E  L+ +LQH
Sbjct: 15  EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQH 73
Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQS 437
           + LVRL     + E   ++ E++ N SL  FL   S
Sbjct: 74  QRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPS 108

>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 57/109 (52%), Gaps = 7/109 (6%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKG----VLPSGQE--IAVKRLSRSSGQGGQ-EFKNEVV 394
           EV+    +   +LG+G FG VY+G    ++    E  +AVK ++ S+    + EF NE  
Sbjct: 13  EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 72
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPKNNNN 443
           ++      ++VRLLG   +G+  ++V E + +  L  +L +  P+  NN
Sbjct: 73  VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENN 121

>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 46/96 (47%), Gaps = 2/96 (2%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
           EV         +LG G FGEV+ G      ++AVK L + S      F  E  L+ +LQH
Sbjct: 15  EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQH 73
Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQS 437
           + LVRL     + E   ++ E++ N SL  FL   S
Sbjct: 74  QRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPS 108

>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 46/96 (47%), Gaps = 2/96 (2%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
           EV         +LG G FGEV+ G      ++AVK L + S      F  E  L+ +LQH
Sbjct: 5   EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQH 63
Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQS 437
           + LVRL     + E   ++ E++ N SL  FL   S
Sbjct: 64  QRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPS 98

>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With Peptide Substrate And Atp Analog Length = 306

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 57/109 (52%), Gaps = 7/109 (6%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKG----VLPSGQE--IAVKRLSRSSGQGGQ-EFKNEVV 394
           EV+    +   +LG+G FG VY+G    ++    E  +AVK ++ S+    + EF NE  
Sbjct: 13  EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 72
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPKNNNN 443
           ++      ++VRLLG   +G+  ++V E + +  L  +L +  P+  NN
Sbjct: 73  VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENN 121

>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex With The Sh2 Domain Of Aps Length = 306

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 57/109 (52%), Gaps = 7/109 (6%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKG----VLPSGQE--IAVKRLSRSSGQGGQ-EFKNEVV 394
           EV+    +   +LG+G FG VY+G    ++    E  +AVK ++ S+    + EF NE  
Sbjct: 13  EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 72
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPKNNNN 443
           ++      ++VRLLG   +G+  ++V E + +  L  +L +  P+  NN
Sbjct: 73  VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENN 121

>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 57/109 (52%), Gaps = 7/109 (6%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKG----VLPSGQE--IAVKRLSRSSGQGGQ-EFKNEVV 394
           EV+    +   +LG+G FG VY+G    ++    E  +AVK ++ S+    + EF NE  
Sbjct: 13  EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 72
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPKNNNN 443
           ++      ++VRLLG   +G+  ++V E + +  L  +L +  P+  NN
Sbjct: 73  VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENN 121

>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 46/96 (47%), Gaps = 2/96 (2%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
           EV         +LG G FGEV+ G      ++AVK L + S      F  E  L+ +LQH
Sbjct: 17  EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQH 75
Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQS 437
           + LVRL     + E   ++ E++ N SL  FL   S
Sbjct: 76  QRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPS 110

>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 46/96 (47%), Gaps = 2/96 (2%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
           EV         +LG G FGEV+ G      ++AVK L + S      F  E  L+ +LQH
Sbjct: 18  EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQH 76
Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQS 437
           + LVRL     + E   ++ E++ N SL  FL   S
Sbjct: 77  QRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPS 111

>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 46/96 (47%), Gaps = 2/96 (2%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
           EV         +LG G FGEV+ G      ++AVK L + S      F  E  L+ +LQH
Sbjct: 11  EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQH 69
Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQS 437
           + LVRL     + E   ++ E++ N SL  FL   S
Sbjct: 70  QRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPS 104

>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 46/96 (47%), Gaps = 2/96 (2%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
           EV         +LG G FGEV+ G      ++AVK L + S      F  E  L+ +LQH
Sbjct: 4   EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQH 62
Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQS 437
           + LVRL     + E   ++ E++ N SL  FL   S
Sbjct: 63  QRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPS 97

>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 46/96 (47%), Gaps = 2/96 (2%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
           EV         +LG G FGEV+ G      ++AVK L + S      F  E  L+ +LQH
Sbjct: 10  EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQH 68
Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQS 437
           + LVRL     + E   ++ E++ N SL  FL   S
Sbjct: 69  QRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPS 103

>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 46/96 (47%), Gaps = 2/96 (2%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
           EV         +LG G FGEV+ G      ++AVK L + S      F  E  L+ +LQH
Sbjct: 9   EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQH 67
Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQS 437
           + LVRL     + E   ++ E++ N SL  FL   S
Sbjct: 68  QRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPS 102

>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 46/96 (47%), Gaps = 2/96 (2%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
           EV         +LG G FGEV+ G      ++AVK L + S      F  E  L+ +LQH
Sbjct: 14  EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQH 72
Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQS 437
           + LVRL     + E   ++ E++ N SL  FL   S
Sbjct: 73  QRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPS 107

>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 46/96 (47%), Gaps = 2/96 (2%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
           EV         +LG G FGEV+ G      ++AVK L + S      F  E  L+ +LQH
Sbjct: 9   EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQH 67
Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQS 437
           + LVRL     + E   ++ E++ N SL  FL   S
Sbjct: 68  QRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPS 102

>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 15/102 (14%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVL--PSGQE--IAVKRLSRSSGQGG------QEFKN 391
           E+  +    +  +G G FGEV +G L  P  +E  +A+K L     +GG      +EF +
Sbjct: 10  EIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTL-----KGGYTERQRREFLS 64
Query: 392 EVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL 433
           E  ++ + +H N++RL G        +++ EF+ N +LD FL
Sbjct: 65  EASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFL 106

>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor Length = 307

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 57/109 (52%), Gaps = 7/109 (6%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKG----VLPSGQE--IAVKRLSRSSGQGGQ-EFKNEVV 394
           EV+    +   +LG+G FG VY+G    ++    E  +AVK ++ S+    + EF NE  
Sbjct: 14  EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 73
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPKNNNN 443
           ++      ++VRLLG   +G+  ++V E + +  L  +L +  P+  NN
Sbjct: 74  VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENN 122

>pdb|3A2E|A Chain A, Crystal Structure Of Ginkbilobin-2, The Novel Antifungal Protein From Ginkgo Biloba Seeds Length = 108

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 27/101 (26%), Positives = 45/101 (44%)
Query: 152 SLLNTQNVTDRGRFNQILASLMSQVVNQAVNNSRKFATRTANFTALQTLYSLAQCTPDLS 211
           S  NTQ +     FN+ L ++++ +      +   + T  A      T Y  A C   +S
Sbjct: 8   SACNTQKIPSGSPFNRNLRAMLADLRQNTAFSGYDYKTSRAGSGGAPTAYGRATCKQSIS 67
Query: 212 SSDCNVCLQAAIAELPNCCSGKTGAQVLIPSCIVRYEFYPF 252
            SDC  CL   +  + + C+   GA+V +  C ++YE   F
Sbjct: 68  QSDCTACLSNLVNRIFSICNNAIGARVQLVDCFIQYEQRSF 108

>pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 46/96 (47%), Gaps = 2/96 (2%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
           EV         +LG G FGEV+ G      ++AVK L + S      F  E  L+ +LQH
Sbjct: 19  EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQH 77
Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQS 437
           + LVRL     + E   ++ E++ N SL  FL   S
Sbjct: 78  QRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPS 112

>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 46/96 (47%), Gaps = 2/96 (2%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
           EV         +LG G FGEV+ G      ++AVK L + S      F  E  L+ +LQH
Sbjct: 9   EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQH 67
Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQS 437
           + LVRL     + E   ++ E++ N SL  FL   S
Sbjct: 68  QRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPS 102

>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo Pyridine Inhibitor Length = 317

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 57/109 (52%), Gaps = 7/109 (6%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKG----VLPSGQE--IAVKRLSRSSGQGGQ-EFKNEVV 394
           EV+    +   +LG+G FG VY+G    ++    E  +AVK ++ S+    + EF NE  
Sbjct: 12  EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 71
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPKNNNN 443
           ++      ++VRLLG   +G+  ++V E + +  L  +L +  P+  NN
Sbjct: 72  VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENN 120

>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 15/102 (14%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVL--PSGQE--IAVKRLSRSSGQGG------QEFKN 391
           E+  +    +  +G G FGEV +G L  P  +E  +A+K L     +GG      +EF +
Sbjct: 12  EIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTL-----KGGYTERQRREFLS 66
Query: 392 EVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL 433
           E  ++ + +H N++RL G        +++ EF+ N +LD FL
Sbjct: 67  EASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFL 108

>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 4/99 (4%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
           E+   +   + KLG+G FGEV+ G       +A+K L +      + F  E  ++ KL+H
Sbjct: 180 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 238
Query: 402 RNLVRLLGFCLEGEEKI-LVYEFVPNKSLDYFLYAQSPK 439
             LV+L  + +  EE I +V E++   SL  FL  ++ K
Sbjct: 239 EKLVQL--YAVVSEEPIYIVTEYMSKGSLLDFLKGETGK 275

>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 4/99 (4%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
           E+   +   + KLG+G FGEV+ G       +A+K L +      + F  E  ++ KL+H
Sbjct: 180 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 238
Query: 402 RNLVRLLGFCLEGEEKI-LVYEFVPNKSLDYFLYAQSPK 439
             LV+L  + +  EE I +V E++   SL  FL  ++ K
Sbjct: 239 EKLVQL--YAVVSEEPIYIVTEYMSKGSLLDFLKGETGK 275

>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 49/98 (50%), Gaps = 1/98 (1%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
           E+     +   ++G G FG VYKG       + +  ++  + Q  Q FKNEV ++ K +H
Sbjct: 8   EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 67
Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPK 439
            N++  +G+  + +  I V ++    SL + L+A   K
Sbjct: 68  VNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHASETK 104

>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex With Amp-Pnp Length = 344

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 7/82 (8%)
Query: 354 LGEGGFGEVYKGV-LPSGQEIAV----KRLSRSSG-QGGQEFKNEVVLVAKLQHRNLVRL 407
           LG G FG V+KGV +P G+ I +    K +   SG Q  Q   + ++ +  L H ++VRL
Sbjct: 39  LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 98
Query: 408 LGFCLEGEEKILVYEFVPNKSL 429
           LG C  G    LV +++P  SL
Sbjct: 99  LGLC-PGSSLQLVTQYLPLGSL 119

>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase Domain Of The Human Epidermal Growth Factor Receptor 3 (Her3) Length = 325

Iteration: 1
 Score = 45.4 bits (106), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 7/82 (8%)
Query: 354 LGEGGFGEVYKGV-LPSGQEIAV----KRLSRSSG-QGGQEFKNEVVLVAKLQHRNLVRL 407
           LG G FG V+KGV +P G+ I +    K +   SG Q  Q   + ++ +  L H ++VRL
Sbjct: 21  LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 80
Query: 408 LGFCLEGEEKILVYEFVPNKSL 429
           LG C  G    LV +++P  SL
Sbjct: 81  LGLC-PGSSLQLVTQYLPLGSL 101

>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535

Iteration: 1
 Score = 45.4 bits (106), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 4/102 (3%)
Query: 339 ETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAK 398
           +  E+   +   + KLG+G FGEV+ G       +A+K L +      + F  E  ++ K
Sbjct: 260 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKK 318
Query: 399 LQHRNLVRLLGFCLEGEEKI-LVYEFVPNKSLDYFLYAQSPK 439
           L+H  LV+L  + +  EE I +V E++   SL  FL  ++ K
Sbjct: 319 LRHEKLVQL--YAVVSEEPIYIVTEYMSKGSLLDFLKGETGK 358

>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292

Iteration: 1
 Score = 45.4 bits (106), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 5/100 (5%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRL--SRSSGQGGQEFKNEVVLVAKL 399
           E+     +   ++G G FG VYKG      ++AVK L  +  + Q  Q FKNEV ++ K 
Sbjct: 20  EIPDGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 77
Query: 400 QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPK 439
           +H N++  +G+  + +  I V ++    SL + L+A   K
Sbjct: 78  RHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHASETK 116

>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286

Iteration: 1
 Score = 45.4 bits (106), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKG--VLPSGQEIAVKRLSRSSG---QGGQEFKNEVVLV 396
           E+  +    +  +G G FGEV  G   LP  +EI V   +  SG   +  ++F +E  ++
Sbjct: 3   EIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIM 62
Query: 397 AKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL 433
            +  H N++ L G   +    +++ EF+ N SLD FL
Sbjct: 63  GQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFL 99

>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 4/99 (4%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
           E+   +   + KLG+G FGEV+ G       +A+K L +      + F  E  ++ KL+H
Sbjct: 180 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 238
Query: 402 RNLVRLLGFCLEGEEKI-LVYEFVPNKSLDYFLYAQSPK 439
             LV+L  + +  EE I +V E++   SL  FL  ++ K
Sbjct: 239 EKLVQL--YAVVSEEPIYIVGEYMSKGSLLDFLKGETGK 275

>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 4/99 (4%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
           E+   +   + KLG+G FGEV+ G       +A+K L +      + F  E  ++ KL+H
Sbjct: 7   EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 65
Query: 402 RNLVRLLGFCLEGEEKI-LVYEFVPNKSLDYFLYAQSPK 439
             LV+L  + +  EE I +V E++   SL  FL  ++ K
Sbjct: 66  EKLVQL--YAVVSEEPIYIVTEYMSKGSLLDFLKGETGK 102

>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 50/99 (50%), Gaps = 5/99 (5%)
Query: 340 TIEVATNNFSTDNKLGEGGFGEVYKGVL--PSGQEIAVKRLSRSSG---QGGQEFKNEVV 394
           T E+  +    +  +G G  GEV  G L  P  +++ V   +  +G   +  ++F +E  
Sbjct: 43  TREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEAS 102
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL 433
           ++ +  H N++RL G    G   ++V E++ N SLD FL
Sbjct: 103 IMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFL 141

>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 50/99 (50%), Gaps = 5/99 (5%)
Query: 340 TIEVATNNFSTDNKLGEGGFGEVYKGVL--PSGQEIAVKRLSRSSG---QGGQEFKNEVV 394
           T E+  +    +  +G G  GEV  G L  P  +++ V   +  +G   +  ++F +E  
Sbjct: 43  TREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEAS 102
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL 433
           ++ +  H N++RL G    G   ++V E++ N SLD FL
Sbjct: 103 IMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFL 141

>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 4/99 (4%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
           E+   +   + KLG+G FGEV+ G       +A+K L +      + F  E  ++ KL+H
Sbjct: 4   EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 62
Query: 402 RNLVRLLGFCLEGEEKI-LVYEFVPNKSLDYFLYAQSPK 439
             LV+L  + +  EE I +V E++   SL  FL  ++ K
Sbjct: 63  EKLVQL--YAVVSEEPIXIVTEYMSKGSLLDFLKGETGK 99

>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 51/94 (54%), Gaps = 7/94 (7%)
Query: 353 KLGEGGFGEV----YKGVLP-SGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRL 407
           +LG+G FG V    Y  +   +G+ +AVK+L  S+ +  ++F+ E+ ++  LQH N+V+ 
Sbjct: 16  QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 75
Query: 408 LGFCLEGEEK--ILVYEFVPNKSLDYFLYAQSPK 439
            G C     +   L+ E++P  SL  +L     +
Sbjct: 76  KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER 109

>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 51/94 (54%), Gaps = 7/94 (7%)
Query: 353 KLGEGGFGEV----YKGVLP-SGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRL 407
           +LG+G FG V    Y  +   +G+ +AVK+L  S+ +  ++F+ E+ ++  LQH N+V+ 
Sbjct: 48  QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 107
Query: 408 LGFCLEGEEK--ILVYEFVPNKSLDYFLYAQSPK 439
            G C     +   L+ E++P  SL  +L     +
Sbjct: 108 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER 141

>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKG--VLPSGQEIAVKRLSRSSG---QGGQEFKNEVVLV 396
           E+  +    +  +G G FGEV  G   LP  +EI V   +  SG   +  ++F +E  ++
Sbjct: 29  EIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIM 88
Query: 397 AKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL 433
            +  H N++ L G   +    +++ EF+ N SLD FL
Sbjct: 89  GQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFL 125

>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 51/94 (54%), Gaps = 7/94 (7%)
Query: 353 KLGEGGFGEV----YKGVLP-SGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRL 407
           +LG+G FG V    Y  +   +G+ +AVK+L  S+ +  ++F+ E+ ++  LQH N+V+ 
Sbjct: 21  QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 80
Query: 408 LGFCLEGEEK--ILVYEFVPNKSLDYFLYAQSPK 439
            G C     +   L+ E++P  SL  +L     +
Sbjct: 81  KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER 114

>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 51/94 (54%), Gaps = 7/94 (7%)
Query: 353 KLGEGGFGEV----YKGVLP-SGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRL 407
           +LG+G FG V    Y  +   +G+ +AVK+L  S+ +  ++F+ E+ ++  LQH N+V+ 
Sbjct: 17  QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 408 LGFCLEGEEK--ILVYEFVPNKSLDYFLYAQSPK 439
            G C     +   L+ E++P  SL  +L     +
Sbjct: 77  KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER 110

>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 51/94 (54%), Gaps = 7/94 (7%)
Query: 353 KLGEGGFGEV----YKGVLP-SGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRL 407
           +LG+G FG V    Y  +   +G+ +AVK+L  S+ +  ++F+ E+ ++  LQH N+V+ 
Sbjct: 23  QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 82
Query: 408 LGFCLEGEEK--ILVYEFVPNKSLDYFLYAQSPK 439
            G C     +   L+ E++P  SL  +L     +
Sbjct: 83  KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER 116

>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 51/94 (54%), Gaps = 7/94 (7%)
Query: 353 KLGEGGFGEV----YKGVLP-SGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRL 407
           +LG+G FG V    Y  +   +G+ +AVK+L  S+ +  ++F+ E+ ++  LQH N+V+ 
Sbjct: 22  QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 81
Query: 408 LGFCLEGEEK--ILVYEFVPNKSLDYFLYAQSPK 439
            G C     +   L+ E++P  SL  +L     +
Sbjct: 82  KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER 115

>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 51/94 (54%), Gaps = 7/94 (7%)
Query: 353 KLGEGGFGEV----YKGVLP-SGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRL 407
           +LG+G FG V    Y  +   +G+ +AVK+L  S+ +  ++F+ E+ ++  LQH N+V+ 
Sbjct: 17  QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 408 LGFCLEGEEK--ILVYEFVPNKSLDYFLYAQSPK 439
            G C     +   L+ E++P  SL  +L     +
Sbjct: 77  KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER 110

>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 51/94 (54%), Gaps = 7/94 (7%)
Query: 353 KLGEGGFGEV----YKGVLP-SGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRL 407
           +LG+G FG V    Y  +   +G+ +AVK+L  S+ +  ++F+ E+ ++  LQH N+V+ 
Sbjct: 18  QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 77
Query: 408 LGFCLEGEEK--ILVYEFVPNKSLDYFLYAQSPK 439
            G C     +   L+ E++P  SL  +L     +
Sbjct: 78  KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER 111

>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 51/94 (54%), Gaps = 7/94 (7%)
Query: 353 KLGEGGFGEV----YKGVLP-SGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRL 407
           +LG+G FG V    Y  +   +G+ +AVK+L  S+ +  ++F+ E+ ++  LQH N+V+ 
Sbjct: 15  QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 74
Query: 408 LGFCLEGEEK--ILVYEFVPNKSLDYFLYAQSPK 439
            G C     +   L+ E++P  SL  +L     +
Sbjct: 75  KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER 108

>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 51/94 (54%), Gaps = 7/94 (7%)
Query: 353 KLGEGGFGEV----YKGVLP-SGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRL 407
           +LG+G FG V    Y  +   +G+ +AVK+L  S+ +  ++F+ E+ ++  LQH N+V+ 
Sbjct: 24  QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 83
Query: 408 LGFCLEGEEK--ILVYEFVPNKSLDYFLYAQSPK 439
            G C     +   L+ E++P  SL  +L     +
Sbjct: 84  KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER 117

>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 51/94 (54%), Gaps = 7/94 (7%)
Query: 353 KLGEGGFGEV----YKGVLP-SGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRL 407
           +LG+G FG V    Y  +   +G+ +AVK+L  S+ +  ++F+ E+ ++  LQH N+V+ 
Sbjct: 17  QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 408 LGFCLEGEEK--ILVYEFVPNKSLDYFLYAQSPK 439
            G C     +   L+ E++P  SL  +L     +
Sbjct: 77  KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER 110

>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 51/94 (54%), Gaps = 7/94 (7%)
Query: 353 KLGEGGFGEV----YKGVLP-SGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRL 407
           +LG+G FG V    Y  +   +G+ +AVK+L  S+ +  ++F+ E+ ++  LQH N+V+ 
Sbjct: 20  QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 408 LGFCLEGEEK--ILVYEFVPNKSLDYFLYAQSPK 439
            G C     +   L+ E++P  SL  +L     +
Sbjct: 80  KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER 113

>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 4/99 (4%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
           E+   +   + KLG+G FGEV+ G       +A+K L +      + F  E  ++ KL+H
Sbjct: 181 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGNMSPEAFLQEAQVMKKLRH 239
Query: 402 RNLVRLLGFCLEGEEKI-LVYEFVPNKSLDYFLYAQSPK 439
             LV+L  + +  EE I +V E++   SL  FL  +  K
Sbjct: 240 EKLVQL--YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGK 276

>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 51/94 (54%), Gaps = 7/94 (7%)
Query: 353 KLGEGGFGEV----YKGVLP-SGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRL 407
           +LG+G FG V    Y  +   +G+ +AVK+L  S+ +  ++F+ E+ ++  LQH N+V+ 
Sbjct: 35  QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 94
Query: 408 LGFCLEGEEK--ILVYEFVPNKSLDYFLYAQSPK 439
            G C     +   L+ E++P  SL  +L     +
Sbjct: 95  KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER 128

>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 51/94 (54%), Gaps = 7/94 (7%)
Query: 353 KLGEGGFGEV----YKGVLP-SGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRL 407
           +LG+G FG V    Y  +   +G+ +AVK+L  S+ +  ++F+ E+ ++  LQH N+V+ 
Sbjct: 35  QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 94
Query: 408 LGFCLEGEEK--ILVYEFVPNKSLDYFLYAQSPK 439
            G C     +   L+ E++P  SL  +L     +
Sbjct: 95  KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER 128

>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 5/100 (5%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRL--SRSSGQGGQEFKNEVVLVAKL 399
           E+     +   ++G G FG VYKG      ++AVK L  +  + Q  Q FKNEV ++ K 
Sbjct: 20  EIPDGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 77
Query: 400 QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPK 439
           +H N++  +G+    +  I V ++    SL + L+A   K
Sbjct: 78  RHVNILLFMGYSTAPQLAI-VTQWCEGSSLYHHLHASETK 116

>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 4/99 (4%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
           E+   +   + KLG+G FGEV+ G       +A+K L +      + F  E  ++ KL+H
Sbjct: 11  EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 69
Query: 402 RNLVRLLGFCLEGEEKI-LVYEFVPNKSLDYFLYAQSPK 439
             LV+L  + +  EE I +V E++   SL  FL  ++ K
Sbjct: 70  EKLVQL--YAVVSEEPIYIVTEYMNKGSLLDFLKGETGK 106

>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 4/99 (4%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
           E+   +   + KLG+G FGEV+ G       +A+K L +      + F  E  ++ KL+H
Sbjct: 14  EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 72
Query: 402 RNLVRLLGFCLEGEEKI-LVYEFVPNKSLDYFLYAQSPK 439
             LV+L  + +  EE I +V E++   SL  FL  +  K
Sbjct: 73  EKLVQL--YAVVSEEPIYIVIEYMSKGSLLDFLKGEMGK 109

>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Compex With Hki-272 Length = 328

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 8/93 (8%)
Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEI----AVKRLSRS-SGQGGQEFKNEVVLVAKL 399
             F     LG G FG VYKG+ +P G+++    A+K L  + S +  +E  +E  ++A +
Sbjct: 16  TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 400 QHRNLVRLLGFCLEGEEKILVYEFVP-NKSLDY 431
            + ++ RLLG CL    + L+ + +P    LDY
Sbjct: 76  DNPHVCRLLGICLTSTVQ-LIMQLMPFGXLLDY 107

>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 4/99 (4%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
           E+   +   + KLG+G FGEV+ G       +A+K L +      + F  E  ++ KL+H
Sbjct: 11  EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 69
Query: 402 RNLVRLLGFCLEGEEKI-LVYEFVPNKSLDYFLYAQSPK 439
             LV+L  + +  EE I +V E++   SL  FL  ++ K
Sbjct: 70  EKLVQL--YAVVSEEPIYIVTEYMNKGSLLDFLKGETGK 106

>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 4/99 (4%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
           E+   +   + KLG+G FGEV+ G       +A+K L +      + F  E  ++ KL+H
Sbjct: 14  EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 72
Query: 402 RNLVRLLGFCLEGEEKI-LVYEFVPNKSLDYFLYAQSPK 439
             LV+L  + +  EE I +V E++   SL  FL  +  K
Sbjct: 73  EKLVQL--YAVVSEEPIYIVIEYMSKGSLLDFLKGEMGK 109

>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor Length = 315

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEI----AVKRLSRS-SGQGGQEFKNEVVLVAKL 399
             F     LG G FG VYKG+ +P G+++    A+K L  + S +  +E  +E  ++A +
Sbjct: 9   TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 68
Query: 400 QHRNLVRLLGFCL 412
            + ++ RLLG CL
Sbjct: 69  DNPHVCRLLGICL 81

>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor- Gw572016 Length = 352

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 50/102 (49%), Gaps = 14/102 (13%)
Query: 325 DNDITTLESLQFDFETIE--------VATNNFSTDNKLGEGGFGEVYKGV-LPSGQEI-- 373
           D DI T E+L F              +    F     LG G FG VYKG+ +P G+++  
Sbjct: 11  DYDIPTTENLYFQGSGEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI 70
Query: 374 --AVKRLSRS-SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCL 412
             A+K L  + S +  +E  +E  ++A + + ++ RLLG CL
Sbjct: 71  PVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICL 112

>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 4/99 (4%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
           E+   +   + KLG+G FGEV+ G       +A+K L +      + F  E  ++ KL+H
Sbjct: 5   EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 63
Query: 402 RNLVRLLGFCLEGEEKI-LVYEFVPNKSLDYFLYAQSPK 439
             LV+L  + +  EE I +V E++   SL  FL  +  K
Sbjct: 64  EKLVQL--YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGK 100

>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 4/99 (4%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
           E+   +   + KLG+G FGEV+ G       +A+K L +      + F  E  ++ KL+H
Sbjct: 3   EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 61
Query: 402 RNLVRLLGFCLEGEEKI-LVYEFVPNKSLDYFLYAQSPK 439
             LV+L  + +  EE I +V E++   SL  FL  +  K
Sbjct: 62  EKLVQL--YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGK 98

>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 4/99 (4%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
           E+   +   + KLG+G FGEV+ G       +A+K L +      + F  E  ++ KL+H
Sbjct: 14  EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 72
Query: 402 RNLVRLLGFCLEGEEKI-LVYEFVPNKSLDYFLYAQSPK 439
             LV+L  + +  EE I +V E++   SL  FL  +  K
Sbjct: 73  EKLVQL--YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGK 109

>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285 Length = 331

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEI----AVKRLSRS-SGQGGQEFKNEVVLVAKL 399
             F     LG G FG VYKG+ +P G+++    A+K L  + S +  +E  +E  ++A +
Sbjct: 19  TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 400 QHRNLVRLLGFCL 412
            + ++ RLLG CL
Sbjct: 79  DNPHVCRLLGICL 91

>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 4/99 (4%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
           E+   +   + KLG+G FGEV+ G       +A+K L +      + F  E  ++ KL+H
Sbjct: 14  EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 72
Query: 402 RNLVRLLGFCLEGEEKI-LVYEFVPNKSLDYFLYAQSPK 439
             LV+L  + +  EE I +V E++   SL  FL  +  K
Sbjct: 73  EKLVQL--YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGK 109

>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase Domain With Erlotinib Length = 337

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEI----AVKRLSRS-SGQGGQEFKNEVVLVAKL 399
             F     LG G FG VYKG+ +P G+++    A+K L  + S +  +E  +E  ++A +
Sbjct: 25  TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 84
Query: 400 QHRNLVRLLGFCL 412
            + ++ RLLG CL
Sbjct: 85  DNPHVCRLLGICL 97

>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Complex With Aee788 Length = 328

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEI----AVKRLSRS-SGQGGQEFKNEVVLVAKL 399
             F     LG G FG VYKG+ +P G+++    A+K L  + S +  +E  +E  ++A +
Sbjct: 16  TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 400 QHRNLVRLLGFCL 412
            + ++ RLLG CL
Sbjct: 76  DNPHVCRLLGICL 88

>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase Domain And A Mig6 Peptide Length = 324

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEI----AVKRLSRS-SGQGGQEFKNEVVLVAKL 399
             F     LG G FG VYKG+ +P G+++    A+K L  + S +  +E  +E  ++A +
Sbjct: 12  TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 71
Query: 400 QHRNLVRLLGFCL 412
            + ++ RLLG CL
Sbjct: 72  DNPHVCRLLGICL 84

>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 34-Jab Length = 327

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEI----AVKRLSRS-SGQGGQEFKNEVVLVAKL 399
             F     LG G FG VYKG+ +P G+++    A+K L  + S +  +E  +E  ++A +
Sbjct: 15  TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 400 QHRNLVRLLGFCL 412
            + ++ RLLG CL
Sbjct: 75  DNPHVCRLLGICL 87

>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation Length = 327

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEI----AVKRLSRS-SGQGGQEFKNEVVLVAKL 399
             F     LG G FG VYKG+ +P G+++    A+K L  + S +  +E  +E  ++A +
Sbjct: 15  TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 400 QHRNLVRLLGFCL 412
            + ++ RLLG CL
Sbjct: 75  DNPHVCRLLGICL 87

>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEI----AVKRLSRS-SGQGGQEFKNEVVLVAKL 399
             F     LG G FG VYKG+ +P G+++    A+K L  + S +  +E  +E  ++A +
Sbjct: 18  TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 400 QHRNLVRLLGFCL 412
            + ++ RLLG CL
Sbjct: 78  DNPHVCRLLGICL 90

>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently Binding To Wz4002 Length = 331

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEI----AVKRLSRS-SGQGGQEFKNEVVLVAKL 399
             F     LG G FG VYKG+ +P G+++    A+K L  + S +  +E  +E  ++A +
Sbjct: 19  TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 400 QHRNLVRLLGFCL 412
            + ++ RLLG CL
Sbjct: 79  DNPHVCRLLGICL 91

>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In Complex With Aee788 Length = 327

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEI----AVKRLSRS-SGQGGQEFKNEVVLVAKL 399
             F     LG G FG VYKG+ +P G+++    A+K L  + S +  +E  +E  ++A +
Sbjct: 15  TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 400 QHRNLVRLLGFCL 412
            + ++ RLLG CL
Sbjct: 75  DNPHVCRLLGICL 87

>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain Length = 330

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEI----AVKRLSRS-SGQGGQEFKNEVVLVAKL 399
             F     LG G FG VYKG+ +P G+++    A+K L  + S +  +E  +E  ++A +
Sbjct: 18  TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 400 QHRNLVRLLGFCL 412
            + ++ RLLG CL
Sbjct: 78  DNPHVCRLLGICL 90

>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In Complex With Dacomitinib (soaked) Length = 329

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEI----AVKRLSRS-SGQGGQEFKNEVVLVAKL 399
             F     LG G FG VYKG+ +P G+++    A+K L  + S +  +E  +E  ++A +
Sbjct: 17  TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 400 QHRNLVRLLGFCL 412
            + ++ RLLG CL
Sbjct: 77  DNPHVCRLLGICL 89

>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEI----AVKRLSRS-SGQGGQEFKNEVVLVAKL 399
             F     LG G FG VYKG+ +P G+++    A+K L  + S +  +E  +E  ++A +
Sbjct: 18  TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 400 QHRNLVRLLGFCL 412
            + ++ RLLG CL
Sbjct: 78  DNPHVCRLLGICL 90

>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 13-Jab Length = 327

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEI----AVKRLSRS-SGQGGQEFKNEVVLVAKL 399
             F     LG G FG VYKG+ +P G+++    A+K L  + S +  +E  +E  ++A +
Sbjct: 15  TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 400 QHRNLVRLLGFCL 412
            + ++ RLLG CL
Sbjct: 75  DNPHVCRLLGICL 87

>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With Dacomitinib Length = 329

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEI----AVKRLSRS-SGQGGQEFKNEVVLVAKL 399
             F     LG G FG VYKG+ +P G+++    A+K L  + S +  +E  +E  ++A +
Sbjct: 17  TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 400 QHRNLVRLLGFCL 412
            + ++ RLLG CL
Sbjct: 77  DNPHVCRLLGICL 89

>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor Receptor Length = 333

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEI----AVKRLSRS-SGQGGQEFKNEVVLVAKL 399
             F     LG G FG VYKG+ +P G+++    A+K L  + S +  +E  +E  ++A +
Sbjct: 21  TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 80
Query: 400 QHRNLVRLLGFCL 412
            + ++ RLLG CL
Sbjct: 81  DNPHVCRLLGICL 93

>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The Gefitinib/erlotinib Resistant Egfr Kinase Domain L858r+t790m Length = 329

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 6/76 (7%)
Query: 343 VATNNFSTDNKLGEGGFGEVYKGV-LPSGQEI----AVKRLSRS-SGQGGQEFKNEVVLV 396
           +    F     LG G FG VYKG+ +P G+++    A+K L  + S +  +E  +E  ++
Sbjct: 14  LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 73
Query: 397 AKLQHRNLVRLLGFCL 412
           A + + ++ RLLG CL
Sbjct: 74  ASVDNPHVCRLLGICL 89

>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In Complex With Amp-Pnp Length = 330

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEI----AVKRLSRS-SGQGGQEFKNEVVLVAKL 399
             F     LG G FG VYKG+ +P G+++    A+K L  + S +  +E  +E  ++A +
Sbjct: 18  TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 400 QHRNLVRLLGFCL 412
            + ++ RLLG CL
Sbjct: 78  DNPHVCRLLGICL 90

>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic Mutant L858r Egfr Kinase Domain Length = 329

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEI----AVKRLSRS-SGQGGQEFKNEVVLVAKL 399
             F     LG G FG VYKG+ +P G+++    A+K L  + S +  +E  +E  ++A +
Sbjct: 17  TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 400 QHRNLVRLLGFCL 412
            + ++ RLLG CL
Sbjct: 77  DNPHVCRLLGICL 89

>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In Complex With Amppnp Length = 334

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEI----AVKRLSRS-SGQGGQEFKNEVVLVAKL 399
             F     LG G FG VYKG+ +P G+++    A+K L  + S +  +E  +E  ++A +
Sbjct: 22  TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 400 QHRNLVRLLGFCL 412
            + ++ RLLG CL
Sbjct: 82  DNPHVCRLLGICL 94

>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In Complex With Mig6 Peptide Length = 329

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEI----AVKRLSRS-SGQGGQEFKNEVVLVAKL 399
             F     LG G FG VYKG+ +P G+++    A+K L  + S +  +E  +E  ++A +
Sbjct: 17  TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 400 QHRNLVRLLGFCL 412
            + ++ RLLG CL
Sbjct: 77  DNPHVCRLLGICL 89

>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In Complex With Amppnp Length = 334

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEI----AVKRLSRS-SGQGGQEFKNEVVLVAKL 399
             F     LG G FG VYKG+ +P G+++    A+K L  + S +  +E  +E  ++A +
Sbjct: 22  TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 400 QHRNLVRLLGFCL 412
            + ++ RLLG CL
Sbjct: 82  DNPHVCRLLGICL 94

>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole Inhibitor Length = 327

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEI----AVKRLSRS-SGQGGQEFKNEVVLVAKL 399
             F     LG G FG VYKG+ +P G+++    A+K L  + S +  +E  +E  ++A +
Sbjct: 15  TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 400 QHRNLVRLLGFCL 412
            + ++ RLLG CL
Sbjct: 75  DNPHVCRLLGICL 87

>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 4/99 (4%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
           E+   +   + KLG+G FGEV+ G       +A+K L +      + F  E  ++ KL+H
Sbjct: 14  EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 72
Query: 402 RNLVRLLGFCLEGEEKI-LVYEFVPNKSLDYFLYAQSPK 439
             LV+L  + +  EE I +V E++   SL  FL  +  K
Sbjct: 73  EKLVQL--YAVVSEEPIYIVCEYMSKGSLLDFLKGEMGK 109

>pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
           E+     +   ++G G FG VYKG       + +  ++  + Q  Q FKNEV ++ K +H
Sbjct: 4   EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 63
Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLY 434
            N++  +G+  + +  I V ++    SL + L+
Sbjct: 64  VNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLH 95

>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKG--VLPSGQEIAVKRLSRSSG---QGGQEFKNEVVLV 396
           E+  +    +  +G G FGEV  G   LP  +++AV   +   G   +  ++F  E  ++
Sbjct: 39  ELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIM 98
Query: 397 AKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL 433
            +  H N+V L G    G+  ++V EF+ N +LD FL
Sbjct: 99  GQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFL 135

>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
           E+     +   ++G G FG VYKG       + +  ++  + Q  Q FKNEV ++ K +H
Sbjct: 9   EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 68
Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLY 434
            N++  +G+  + +  I V ++    SL + L+
Sbjct: 69  VNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLH 100

>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
           E+     +   ++G G FG VYKG       + +  ++  + Q  Q FKNEV ++ K +H
Sbjct: 9   EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 68
Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLY 434
            N++  +G+  + +  I V ++    SL + L+
Sbjct: 69  VNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLH 100

>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
           E+     +   ++G G FG VYKG       + +  ++  + Q  Q FKNEV ++ K +H
Sbjct: 6   EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 65
Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLY 434
            N++  +G+  + +  I V ++    SL + L+
Sbjct: 66  VNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLH 97

>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor Length = 335

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 63/140 (45%), Gaps = 12/140 (8%)
Query: 311 KAKNKYNA---VPEVNADNDITTLESLQFDF-ETIEVATNNFSTDNKLGEGGFGEVYKG- 365
           K K KY     + E    N  T ++  Q  + E  E   NN      LG G FG+V +  
Sbjct: 7   KQKPKYQVRWKIIESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEAT 66
Query: 366 VLPSGQE-----IAVKRLSRSSGQGGQE-FKNEVVLVAKL-QHRNLVRLLGFCLEGEEKI 418
               G+E     +AVK L  ++    +E   +E+ +++ L QH N+V LLG C  G   +
Sbjct: 67  AFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVL 126
Query: 419 LVYEFVPNKSLDYFLYAQSP 438
           ++ E+     L  FL  + P
Sbjct: 127 VITEYCCYGDLLNFLRRKRP 146

>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 57/117 (48%), Gaps = 10/117 (8%)
Query: 334 LQFDFETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQ-EIAVKRLSRSSGQGGQEFKNE 392
           L++D+E  E           LG+G +G VY G   S Q  IA+K +     +  Q    E
Sbjct: 15  LEYDYEYDENGDRVV-----LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEE 69
Query: 393 VVLVAKLQHRNLVRLLG-FCLEGEEKILVYEFVPNKSLDYFLYAQ-SP-KNNNNWIG 446
           + L   L+H+N+V+ LG F   G  KI + E VP  SL   L ++  P K+N   IG
Sbjct: 70  IALHKHLKHKNIVQYLGSFSENGFIKIFM-EQVPGGSLSALLRSKWGPLKDNEQTIG 125

>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
           E+     +   ++G G FG VYKG       + +  ++  + Q  Q FKNEV ++ K +H
Sbjct: 4   EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 63
Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLY 434
            N++  +G+  + +  I V ++    SL + L+
Sbjct: 64  VNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLH 95

>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
           E+     +   ++G G FG VYKG       + +  ++  + Q  Q FKNEV ++ K +H
Sbjct: 24  EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 83
Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLY 434
            N++  +G+  + +  I V ++    SL + L+
Sbjct: 84  VNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLH 115

>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/98 (24%), Positives = 48/98 (48%), Gaps = 1/98 (1%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
           E+  +      ++G G FG VYKG       + + ++   + +  Q F+NEV ++ K +H
Sbjct: 32  EIEASEVMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRH 91
Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPK 439
            N++  +G+ +  +   +V ++    SL   L+ Q  K
Sbjct: 92  VNILLFMGY-MTKDNLAIVTQWCEGSSLYKHLHVQETK 128

>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 51/97 (52%), Gaps = 5/97 (5%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKG--VLPSGQE--IAVKRLSRS-SGQGGQEFKNEVVLV 396
           E+  +  + +  +G G FGEV  G   LP  +E  +A+K L    + +  ++F  E  ++
Sbjct: 18  EIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIM 77
Query: 397 AKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL 433
            +  H N++ L G   + +  ++V E++ N SLD FL
Sbjct: 78  GQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFL 114

>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 4/99 (4%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
           E+   +   + KLG+G FGEV+ G       +A+K L +      + F  E  ++ K++H
Sbjct: 14  EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKIRH 72
Query: 402 RNLVRLLGFCLEGEEKI-LVYEFVPNKSLDYFLYAQSPK 439
             LV+L  + +  EE I +V E++   SL  FL  +  K
Sbjct: 73  EKLVQL--YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGK 109

>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
           E+     +   ++G G FG VYKG       + +  ++  + Q  Q FKNEV ++ K +H
Sbjct: 32  EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 91
Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLY 434
            N++  +G+  + +  I V ++    SL + L+
Sbjct: 92  VNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLH 123

>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3 Domain Length = 341

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/94 (36%), Positives = 45/94 (47%), Gaps = 8/94 (8%)
Query: 343 VATNNFSTDNKLGEGGFGEVYKGVL--PSGQ--EIAVKRLSR---SSGQGGQEFKNEVVL 395
           +   +     KLG+G FG V +G    PSG+   +AVK L     S  +   +F  EV  
Sbjct: 9   IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 68
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSL 429
           +  L HRNL+RL G  L    K +V E  P  SL
Sbjct: 69  MHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSL 101

>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
           E+     +   ++G G FG VYKG       + +  ++  + Q  Q FKNEV ++ K +H
Sbjct: 31  EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 90
Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLY 434
            N++  +G+  + +  I V ++    SL + L+
Sbjct: 91  VNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLH 122

>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95 Length = 276

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/94 (36%), Positives = 45/94 (47%), Gaps = 8/94 (8%)
Query: 343 VATNNFSTDNKLGEGGFGEVYKGVL--PSGQ--EIAVKRLSR---SSGQGGQEFKNEVVL 395
           +   +     KLG+G FG V +G    PSG+   +AVK L     S  +   +F  EV  
Sbjct: 5   IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 64
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSL 429
           +  L HRNL+RL G  L    K +V E  P  SL
Sbjct: 65  MHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSL 97

>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 45/96 (46%), Gaps = 2/96 (2%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
           EV         +LG G  GEV+ G      ++AVK L + S      F  E  L+ +LQH
Sbjct: 9   EVPRETLKLVERLGAGQAGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQH 67
Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQS 437
           + LVRL     + E   ++ E++ N SL  FL   S
Sbjct: 68  QRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPS 102

>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
           E+     +   ++G G FG VYKG       + +  ++  + Q  Q FKNEV ++ K +H
Sbjct: 32  EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 91
Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLY 434
            N++  +G+  + +  I V ++    SL + L+
Sbjct: 92  VNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLH 123

>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor Length = 275

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/94 (36%), Positives = 45/94 (47%), Gaps = 8/94 (8%)
Query: 343 VATNNFSTDNKLGEGGFGEVYKGVL--PSGQ--EIAVKRLSR---SSGQGGQEFKNEVVL 395
           +   +     KLG+G FG V +G    PSG+   +AVK L     S  +   +F  EV  
Sbjct: 5   IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 64
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSL 429
           +  L HRNL+RL G  L    K +V E  P  SL
Sbjct: 65  MHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSL 97

>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 57/117 (48%), Gaps = 10/117 (8%)
Query: 334 LQFDFETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQ-EIAVKRLSRSSGQGGQEFKNE 392
           L++D+E  E           LG+G +G VY G   S Q  IA+K +     +  Q    E
Sbjct: 1   LEYDYEYDENGDRVV-----LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEE 55
Query: 393 VVLVAKLQHRNLVRLLG-FCLEGEEKILVYEFVPNKSLDYFLYAQ-SP-KNNNNWIG 446
           + L   L+H+N+V+ LG F   G  KI + E VP  SL   L ++  P K+N   IG
Sbjct: 56  IALHKHLKHKNIVQYLGSFSENGFIKIFM-EQVPGGSLSALLRSKWGPLKDNEQTIG 111

>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 5/97 (5%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVL--PSGQEIAVKRLSRSSG---QGGQEFKNEVVLV 396
           E+  +    +  +G G FGEV  G L  P  +EI V   +  +G   +  ++F +E  ++
Sbjct: 4   EIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIM 63
Query: 397 AKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL 433
            +  H N++ L G   + +  +++ E++ N SLD FL
Sbjct: 64  GQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFL 100

>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-amino-1-(4- Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol Length = 273

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/94 (36%), Positives = 45/94 (47%), Gaps = 8/94 (8%)
Query: 343 VATNNFSTDNKLGEGGFGEVYKGVL--PSGQ--EIAVKRLSR---SSGQGGQEFKNEVVL 395
           +   +     KLG+G FG V +G    PSG+   +AVK L     S  +   +F  EV  
Sbjct: 5   IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 64
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSL 429
           +  L HRNL+RL G  L    K +V E  P  SL
Sbjct: 65  MHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSL 97

>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 46/93 (49%), Gaps = 1/93 (1%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
           E+     +   ++G G FG VYKG       + +  ++  + Q  Q FKNEV ++ K +H
Sbjct: 4   EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 63
Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLY 434
            N++  +G+    +  I V ++    SL + L+
Sbjct: 64  VNILLFMGYSTAPQLAI-VTQWCEGSSLYHHLH 95

>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 5/97 (5%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVL--PSGQEIAVKRLSRSSG---QGGQEFKNEVVLV 396
           E+  +    +  +G G FGEV  G L  P  +EI V   +  +G   +  ++F +E  ++
Sbjct: 25  EIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIM 84
Query: 397 AKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL 433
            +  H N++ L G   + +  +++ E++ N SLD FL
Sbjct: 85  GQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFL 121

>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 5/97 (5%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVL--PSGQEIAVKRLSRSSG---QGGQEFKNEVVLV 396
           E+  +    +  +G G FGEV  G L  P  +EI V   +  +G   +  ++F +E  ++
Sbjct: 10  EIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIM 69
Query: 397 AKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL 433
            +  H N++ L G   + +  +++ E++ N SLD FL
Sbjct: 70  GQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFL 106

>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain Length = 277

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/94 (36%), Positives = 45/94 (47%), Gaps = 8/94 (8%)
Query: 343 VATNNFSTDNKLGEGGFGEVYKGVL--PSGQ--EIAVKRLSR---SSGQGGQEFKNEVVL 395
           +   +     KLG+G FG V +G    PSG+   +AVK L     S  +   +F  EV  
Sbjct: 9   IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 68
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSL 429
           +  L HRNL+RL G  L    K +V E  P  SL
Sbjct: 69  MHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSL 101

>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And Unphosphorylated Kinase Domains Of The Cdc42-Associated Tyrosine Kinase Ack1 Bound To Amp-Pcp Length = 291

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/94 (36%), Positives = 45/94 (47%), Gaps = 8/94 (8%)
Query: 343 VATNNFSTDNKLGEGGFGEVYKGVL--PSGQ--EIAVKRLSR---SSGQGGQEFKNEVVL 395
           +   +     KLG+G FG V +G    PSG+   +AVK L     S  +   +F  EV  
Sbjct: 15  IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 74
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSL 429
           +  L HRNL+RL G  L    K +V E  P  SL
Sbjct: 75  MHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSL 107

>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of The Tyrosine Kinase Ack1 Length = 291

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/94 (36%), Positives = 45/94 (47%), Gaps = 8/94 (8%)
Query: 343 VATNNFSTDNKLGEGGFGEVYKGVL--PSGQ--EIAVKRLSR---SSGQGGQEFKNEVVL 395
           +   +     KLG+G FG V +G    PSG+   +AVK L     S  +   +F  EV  
Sbjct: 15  IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 74
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSL 429
           +  L HRNL+RL G  L    K +V E  P  SL
Sbjct: 75  MHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSL 107

>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
           E+   +   + KLG+G FGEV+ G       +A+K L +      + F  E  ++ KL+H
Sbjct: 14  EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 72
Query: 402 RNLVRLLGFCLEGEEKI-LVYEFVPNKSLDYFLYAQSPK 439
             LV+L  + +  EE I +V E++    L  FL  +  K
Sbjct: 73  EKLVQL--YAVVSEEPIYIVMEYMSKGCLLDFLKGEMGK 109

>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Query: 344 ATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFK-NEVVLVAKLQH 401
           +++ F    KLG G +  VYKG+   +G  +A+K +   S +G       E+ L+ +L+H
Sbjct: 3   SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH 62
Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKSLDYF 432
            N+VRL        +  LV+EF+ N    Y 
Sbjct: 63  ENIVRLYDVIHTENKLTLVFEFMDNDLKKYM 93

>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide Inhibitor Length = 333

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/125 (29%), Positives = 58/125 (46%), Gaps = 12/125 (9%)
Query: 311 KAKNKYNA---VPEVNADNDITTLESLQFDF-ETIEVATNNFSTDNKLGEGGFGEVYKG- 365
           K K KY     + E    N  T ++  Q  + E  E   NN      LG G FG+V +  
Sbjct: 7   KQKPKYQVRWKIIESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEAT 66
Query: 366 VLPSGQE-----IAVKRLSRSSGQGGQE-FKNEVVLVAKL-QHRNLVRLLGFCLEGEEKI 418
               G+E     +AVK L  ++    +E   +E+ +++ L QH N+V LLG C  G   +
Sbjct: 67  AFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVL 126
Query: 419 LVYEF 423
           ++ E+
Sbjct: 127 VITEY 131

>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A Pyrimidinopyridone Inhibitor Length = 333

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 63/139 (45%), Gaps = 12/139 (8%)
Query: 311 KAKNKYNA---VPEVNADNDITTLESLQFDF-ETIEVATNNFSTDNKLGEGGFGEVYKG- 365
           K K KY     + E    N  T ++  Q  + E  E   NN      LG G FG+V +  
Sbjct: 7   KQKPKYQVRWKIIESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEAT 66
Query: 366 VLPSGQE-----IAVKRLSRSSGQGGQE-FKNEVVLVAKL-QHRNLVRLLGFCLEGEEKI 418
               G+E     +AVK L  ++    +E   +E+ +++ L QH N+V LLG C  G   +
Sbjct: 67  AFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVL 126
Query: 419 LVYEFVPNKSLDYFLYAQS 437
           ++ E+     L  FL  +S
Sbjct: 127 VITEYCCYGDLLNFLRRKS 145

>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine Derivatives As Potent, Selective Tie-2 Inhibitors Length = 317

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 5/93 (5%)
Query: 346 NNFSTDNKLGEGGFGEVYKGVLPSG---QEIAVKRLSR-SSGQGGQEFKNEVVLVAKL-Q 400
           N+    + +GEG FG+V K  +       + A+KR+   +S    ++F  E+ ++ KL  
Sbjct: 15  NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 74
Query: 401 HRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL 433
           H N++ LLG C       L  E+ P+ +L  FL
Sbjct: 75  HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL 107

>pdb|1FVR|A Chain A, Tie2 Kinase Domain Length = 327

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 5/93 (5%)
Query: 346 NNFSTDNKLGEGGFGEVYKGVLPSG---QEIAVKRLSR-SSGQGGQEFKNEVVLVAKL-Q 400
           N+    + +GEG FG+V K  +       + A+KR+   +S    ++F  E+ ++ KL  
Sbjct: 25  NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 84
Query: 401 HRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL 433
           H N++ LLG C       L  E+ P+ +L  FL
Sbjct: 85  HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL 117

>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 353 KLGEGGFGEV-YKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFC 411
           K+GEG  G V    V  SG+ +AVK++     Q  +   NEVV++   QH N+V +    
Sbjct: 27  KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 86
Query: 412 LEGEEKILVYEFVPNKSL 429
           L G+E  +V EF+   +L
Sbjct: 87  LVGDELWVVMEFLEGGAL 104

>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
           E+   +   + KLG+G FGEV+ G       +A+K L +      + F  E  ++ KL+H
Sbjct: 14  EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 72
Query: 402 RNLVRLLGFCLEGEEKI-LVYEFVPNKSLDYFLYAQSPK 439
             LV+L  + +  EE I +V E++    L  FL  +  K
Sbjct: 73  EKLVQL--YAVVSEEPIYIVTEYMSKGCLLDFLKGEMGK 109

>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A Thiazolopyrimidine Inhibitor Length = 324

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 5/93 (5%)
Query: 346 NNFSTDNKLGEGGFGEVYKGVLPSG---QEIAVKRLSR-SSGQGGQEFKNEVVLVAKL-Q 400
           N+    + +GEG FG+V K  +       + A+KR+   +S    ++F  E+ ++ KL  
Sbjct: 22  NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 81
Query: 401 HRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL 433
           H N++ LLG C       L  E+ P+ +L  FL
Sbjct: 82  HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL 114

>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 4/98 (4%)
Query: 343 VATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGG--QEFKNEVVLVAKL 399
           V   NF    K+GEG +G VYK     +G+ +A+K++   +   G       E+ L+ +L
Sbjct: 4   VDMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 63
Query: 400 QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQS 437
            H N+V+LL       +  LV+EF+ ++ L  F+ A +
Sbjct: 64  NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA 100

>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 353 KLGEGGFGEV-YKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFC 411
           K+GEG  G V    V  SG+ +AVK++     Q  +   NEVV++   QH N+V +    
Sbjct: 31  KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 90
Query: 412 LEGEEKILVYEFVPNKSL 429
           L G+E  +V EF+   +L
Sbjct: 91  LVGDELWVVMEFLEGGAL 108

>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide Length = 350

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/86 (41%), Positives = 50/86 (58%), Gaps = 12/86 (13%)
Query: 350 TDNK-LGEGGFGEVYKGVL-PSGQEIAVKRLSRSSGQGGQEFKN-EVVLVAKLQHRNLVR 406
           TD K +G G FG VY+  L  SG+ +A+K++ +     G+ FKN E+ ++ KL H N+VR
Sbjct: 23  TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----GKAFKNRELQIMRKLDHCNIVR 77
Query: 407 LLGFCL-EGEEKILVYEFVPNKSLDY 431
           L  F    GE+K  VY    N  LDY
Sbjct: 78  LRYFFYSSGEKKDEVYL---NLVLDY 100

>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 353 KLGEGGFGEV-YKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFC 411
           K+GEG  G V    V  SG+ +AVK++     Q  +   NEVV++   QH N+V +    
Sbjct: 36  KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 95
Query: 412 LEGEEKILVYEFVPNKSL 429
           L G+E  +V EF+   +L
Sbjct: 96  LVGDELWVVMEFLEGGAL 113

>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta. Length = 352

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/86 (41%), Positives = 50/86 (58%), Gaps = 12/86 (13%)
Query: 350 TDNK-LGEGGFGEVYKGVL-PSGQEIAVKRLSRSSGQGGQEFKN-EVVLVAKLQHRNLVR 406
           TD K +G G FG VY+  L  SG+ +A+K++ +     G+ FKN E+ ++ KL H N+VR
Sbjct: 23  TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----GKAFKNRELQIMRKLDHCNIVR 77
Query: 407 LLGFCL-EGEEKILVYEFVPNKSLDY 431
           L  F    GE+K  VY    N  LDY
Sbjct: 78  LRYFFYSSGEKKDEVYL---NLVLDY 100

>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With 6-Bromoindirubin-3'-Oxime Length = 350

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 36/86 (41%), Positives = 50/86 (58%), Gaps = 12/86 (13%)
Query: 350 TDNK-LGEGGFGEVYKGVL-PSGQEIAVKRLSRSSGQGGQEFKN-EVVLVAKLQHRNLVR 406
           TD K +G G FG VY+  L  SG+ +A+K++ +     G+ FKN E+ ++ KL H N+VR
Sbjct: 23  TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----GKAFKNRELQIMRKLDHCNIVR 77
Query: 407 LLGFCL-EGEEKILVYEFVPNKSLDY 431
           L  F    GE+K  VY    N  LDY
Sbjct: 78  LRYFFYSSGEKKDEVYL---NLVLDY 100

>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 4/90 (4%)
Query: 344 ATNNFSTDNK---LGEGGFGEVYK-GVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKL 399
           A N+F T +K   LG G FG+V+K     +G ++A K +     +  +E KNE+ ++ +L
Sbjct: 84  AVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQL 143
Query: 400 QHRNLVRLLGFCLEGEEKILVYEFVPNKSL 429
            H NL++L        + +LV E+V    L
Sbjct: 144 DHANLIQLYDAFESKNDIVLVMEYVDGGEL 173

>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 353 KLGEGGFGEV-YKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFC 411
           K+GEG  G V    V  SG+ +AVK++     Q  +   NEVV++   QH N+V +    
Sbjct: 38  KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 97
Query: 412 LEGEEKILVYEFVPNKSL 429
           L G+E  +V EF+   +L
Sbjct: 98  LVGDELWVVMEFLEGGAL 115

>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 37/125 (29%), Positives = 58/125 (46%), Gaps = 12/125 (9%)
Query: 311 KAKNKYNA---VPEVNADNDITTLESLQFDF-ETIEVATNNFSTDNKLGEGGFGEVYKG- 365
           K K KY     + E    N  T ++  Q  + E  E   NN      LG G FG+V +  
Sbjct: 7   KQKPKYQVRWKIIESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEAT 66
Query: 366 VLPSGQE-----IAVKRLSRSSGQGGQE-FKNEVVLVAKL-QHRNLVRLLGFCLEGEEKI 418
               G+E     +AVK L  ++    +E   +E+ +++ L QH N+V LLG C  G   +
Sbjct: 67  AFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVL 126
Query: 419 LVYEF 423
           ++ E+
Sbjct: 127 VITEY 131

>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And Kinase Domains Length = 361

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 6/73 (8%)
Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEI----AVKRLSRS-SGQGGQEFKNEVVLVAKL 399
             F     LG G FG VYKG+ +P G+++    A+  L  + S +  +E  +E  ++A +
Sbjct: 49  TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASV 108
Query: 400 QHRNLVRLLGFCL 412
            + ++ RLLG CL
Sbjct: 109 DNPHVCRLLGICL 121

>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In Complex With Amp-Pnp Length = 327

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 6/73 (8%)
Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEI----AVKRLSRS-SGQGGQEFKNEVVLVAKL 399
             F     L  G FG VYKG+ +P G+++    A+K L  + S +  +E  +E  ++A +
Sbjct: 15  TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 400 QHRNLVRLLGFCL 412
            + ++ RLLG CL
Sbjct: 75  DNPHVCRLLGICL 87

>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297

Iteration: 1
 Score = 41.6 bits (96), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 4/97 (4%)
Query: 344 ATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGG--QEFKNEVVLVAKLQ 400
           +  NF    K+GEG +G VYK     +G+ +A+K++   +   G       E+ L+ +L 
Sbjct: 1   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 401 HRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQS 437
           H N+V+LL       +  LV+EF+ ++ L  F+ A +
Sbjct: 61  HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA 96

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	451
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	8e-53
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	8e-53
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	1e-52
3soc_A	322	Activin receptor type-2A; structural genomics cons	2e-31
2e79_A	108	Ginkbilobin-2; DUF26 fold, C-X8-C-X2-C motif, lect	4e-31
2e79_A	108	Ginkbilobin-2; DUF26 fold, C-X8-C-X2-C motif, lect	7e-30
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	2e-26
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	4e-21
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	9e-20
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	5e-19
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	6e-19
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	1e-18
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	3e-18
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	4e-18
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	5e-18
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	6e-18
4aoj_A	329	High affinity nerve growth factor receptor; transf	8e-18
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	1e-17
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	1e-17
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	2e-17
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	2e-17
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	2e-17
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	2e-17
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	2e-17
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	3e-17
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	5e-17
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	7e-17
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	9e-17
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	1e-16
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	1e-16
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	1e-16
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	1e-16
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	1e-16
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	2e-16
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	2e-16
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	2e-16
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	2e-16
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	4e-16
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	4e-16
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	6e-16
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	7e-16
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	9e-16
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	1e-15
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	1e-15
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	1e-15
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	1e-15
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	1e-15
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	2e-15
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	2e-15
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	2e-15
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	2e-15
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	3e-15
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	3e-15
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	3e-15
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	4e-15
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	4e-15
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	4e-15
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	4e-15
3pls_A	298	Macrophage-stimulating protein receptor; protein k	4e-15
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	6e-15
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	7e-15
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	1e-14
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	2e-14
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	2e-14
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	2e-14
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	7e-14
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	9e-14
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	1e-13
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	1e-13
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	2e-13
3q4u_A	301	Activin receptor type-1; structural genomics conso	5e-13
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	7e-13
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	9e-13
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	2e-12
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	3e-12
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	7e-12
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	1e-11
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	2e-11
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	3e-11
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	4e-11
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	9e-11
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	1e-10
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	1e-10
2a19_B	284	Interferon-induced, double-stranded RNA-activated	2e-10
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	2e-10
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	3e-10
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	4e-10
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	4e-10
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	5e-10
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	5e-10
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	5e-10
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	6e-10
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	1e-09
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	1e-09
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	1e-09
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	2e-09
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	2e-09
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	3e-09
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	3e-09
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	5e-09
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	5e-09
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	6e-09
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	7e-09
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	9e-09
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	1e-08
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	1e-08
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	1e-08
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	1e-08
3bhy_A	283	Death-associated protein kinase 3; death associate	2e-08
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	2e-08
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	2e-08
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	2e-08
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	2e-08
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	2e-08
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	2e-08
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	2e-08
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	2e-08
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	2e-08
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	3e-08
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	3e-08
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	3e-08
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	9e-08
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	1e-07
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	1e-07
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	1e-07
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	2e-07
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	2e-07
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	2e-07
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	3e-07
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	3e-07
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	3e-07
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	3e-07
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	4e-07
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	4e-07
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	5e-07
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	6e-07
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	6e-07
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	8e-07
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	8e-07
3niz_A	311	Rhodanese family protein; structural genomics, str	1e-06
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	1e-06
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	1e-06
3uqc_A	286	Probable conserved transmembrane protein; structur	2e-06
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	2e-06
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	2e-06
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	2e-06
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	3e-06
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	3e-06
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	3e-06
3o0g_A	292	Cell division protein kinase 5; kinase activator c	4e-06
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	5e-06
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	6e-06
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	6e-06
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	6e-06
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	6e-06
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	8e-06
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	8e-06
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	9e-06
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	1e-05
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	2e-05
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	2e-05
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	2e-05
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	2e-05
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	2e-05
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	2e-05
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	3e-05
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	4e-05
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	4e-05
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	5e-05
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	6e-05
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	6e-05
3aln_A	327	Dual specificity mitogen-activated protein kinase;	7e-05
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	1e-04
3an0_A	340	Dual specificity mitogen-activated protein kinase;	1e-04
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	1e-04
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	2e-04
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	2e-04
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	2e-04
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	2e-04
3fme_A	290	Dual specificity mitogen-activated protein kinase;	2e-04
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	2e-04
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	3e-04
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	3e-04
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	3e-04
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	3e-04
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	3e-04
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	5e-04
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	6e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-04
2dyl_A	318	Dual specificity mitogen-activated protein kinase	6e-04
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	7e-04
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	8e-04
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	9e-04

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score =  179 bits (456), Expect = 8e-53
 Identities = 47/111 (42%), Positives = 68/111 (61%), Gaps = 2/111 (1%)

Query: 336 FDFETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQ-EFKNEVV 394
           F    ++VA++NFS  N LG GGFG+VYKG L  G  +AVKRL     QGG+ +F+ EV 
Sbjct: 20  FSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVE 79

Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPKNNN-NW 444
           +++   HRNL+RL GFC+   E++LVY ++ N S+   L  +       +W
Sbjct: 80  MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDW 130

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score =  179 bits (456), Expect = 8e-53
 Identities = 48/136 (35%), Positives = 78/136 (57%), Gaps = 1/136 (0%)

Query: 310 RKAKNKYNAVPEVNADNDITTLESLQFDFETIEVATNNFSTDNKLGEGGFGEVYKGVLPS 369
            K     N++ +  + + +   ES +     +E ATNNF     +G G FG+VYKGVL  
Sbjct: 3   SKYSKATNSINDALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRD 62

Query: 370 GQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSL 429
           G ++A+KR +  S QG +EF+ E+  ++  +H +LV L+GFC E  E IL+Y+++ N +L
Sbjct: 63  GAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNL 122

Query: 430 DYFLY-AQSPKNNNNW 444
              LY +  P  + +W
Sbjct: 123 KRHLYGSDLPTMSMSW 138

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score =  178 bits (454), Expect = 1e-52
 Identities = 47/132 (35%), Positives = 70/132 (53%), Gaps = 11/132 (8%)

Query: 323 NADNDITTLESLQFDFETIEVATNNFS------TDNKLGEGGFGEVYKGVLPSGQEIAVK 376
           N   +++      F F  ++  TNNF         NK+GEGGFG VYKG +     +AVK
Sbjct: 2   NKSLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVN-NTTVAVK 60

Query: 377 RLS----RSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYF 432
           +L+     ++ +  Q+F  E+ ++AK QH NLV LLGF  +G++  LVY ++PN SL   
Sbjct: 61  KLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDR 120

Query: 433 LYAQSPKNNNNW 444
           L         +W
Sbjct: 121 LSCLDGTPPLSW 132

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score =  122 bits (307), Expect = 2e-31
 Identities = 23/105 (21%), Positives = 40/105 (38%), Gaps = 6/105 (5%)

Query: 333 SLQFDFETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNE 392
            +    E +   +           G FG V+K  L   + +AVK       Q   + + E
Sbjct: 11  GVDLGTENLYFQSMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDKQ-SWQNEYE 68

Query: 393 VVLVAKLQHRNLVRLLGFCLEGE----EKILVYEFVPNKSLDYFL 433
           V  +  ++H N+++ +G    G     +  L+  F    SL  FL
Sbjct: 69  VYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFL 113

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score =  108 bits (271), Expect = 2e-26
 Identities = 32/126 (25%), Positives = 52/126 (41%), Gaps = 12/126 (9%)

Query: 334 LQFDFETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNE- 392
           ++       +  +N      +G G +G VYKG L   + +AVK  S       Q F NE 
Sbjct: 1   MEAAASEPSLDLDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSF---ANRQNFINEK 56

Query: 393 -VVLVAKLQHRNLVRLLGFCLEGE-----EKILVYEFVPNKSLDYFLYAQSPKNNNNW-I 445
            +  V  ++H N+ R +            E +LV E+ PN SL  +L   +    ++  +
Sbjct: 57  NIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSCRL 116

Query: 446 GQDATR 451
               TR
Sbjct: 117 AHSVTR 122

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 92.4 bits (230), Expect = 4e-21
 Identities = 27/136 (19%), Positives = 58/136 (42%), Gaps = 3/136 (2%)

Query: 311 KAKNKYNAVPEVNADNDITTLESLQFDFETIEVATNNFSTDNKLGEGGFGEVYKGVLPSG 370
           K  + ++ + + +             D + +++   + +   K+G G FG V++     G
Sbjct: 2   KHHHHHHPMSDYDIPTTENLYFQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEW-HG 60

Query: 371 QEIAVKRLSRS--SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKS 428
            ++AVK L       +   EF  EV ++ +L+H N+V  +G   +     +V E++   S
Sbjct: 61  SDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGS 120

Query: 429 LDYFLYAQSPKNNNNW 444
           L   L+    +   + 
Sbjct: 121 LYRLLHKSGAREQLDE 136

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 88.1 bits (219), Expect = 9e-20
 Identities = 33/124 (26%), Positives = 53/124 (42%), Gaps = 17/124 (13%)

Query: 324 ADNDITTLESLQFDFETIEVATNNFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSRSS 382
             ++             IE        + ++G+GGFG V+KG L      +A+K L    
Sbjct: 4   GGSEFPKSRLPTLADNEIEY-------EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGD 56

Query: 383 GQGG-------QEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYA 435
            +G        QEF+ EV +++ L H N+V+L G         +V EFVP   L + L  
Sbjct: 57  SEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNP--PRMVMEFVPCGDLYHRLLD 114

Query: 436 QSPK 439
           ++  
Sbjct: 115 KAHP 118

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 86.2 bits (214), Expect = 5e-19
 Identities = 30/100 (30%), Positives = 51/100 (51%), Gaps = 8/100 (8%)

Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVL--------PSGQEIAVKRLSRSSGQGGQEFKNEV 393
           ++   +   +  LG+G F +++KGV             E+ +K L ++     + F    
Sbjct: 4   KIRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAA 63

Query: 394 VLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL 433
            +++KL H++LV   G C+ G+E ILV EFV   SLD +L
Sbjct: 64  SMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYL 103

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 85.8 bits (213), Expect = 6e-19
 Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 12/108 (11%)

Query: 337 DFETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLV 396
           D++ IEV       +  +G G FG V K      +++A+K++   S +  + F  E+  +
Sbjct: 6   DYKEIEV-------EEVVGRGAFGVVCKAKW-RAKDVAIKQIESESER--KAFIVELRQL 55

Query: 397 AKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPKNNNNW 444
           +++ H N+V+L G CL      LV E+    SL   L+   P      
Sbjct: 56  SRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTA 101

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 84.6 bits (210), Expect = 1e-18
 Identities = 31/101 (30%), Positives = 45/101 (44%), Gaps = 12/101 (11%)

Query: 337 DFETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRL----SRSSGQGGQEFKNE 392
           DF  + +       +  +G GGFG+VY+     G E+AVK           Q  +  + E
Sbjct: 5   DFAELTL-------EEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQE 56

Query: 393 VVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL 433
             L A L+H N++ L G CL+     LV EF     L+  L
Sbjct: 57  AKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVL 97

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 83.4 bits (207), Expect = 3e-18
 Identities = 26/107 (24%), Positives = 43/107 (40%), Gaps = 12/107 (11%)

Query: 337 DFETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRS--SGQGGQEFKNEVV 394
           DF+ +           KL E   GE++KG    G +I VK L     S +  ++F  E  
Sbjct: 8   DFKQLNF-------LTKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECP 59

Query: 395 LVAKLQHRNLVRLLGFCLEGEEKIL--VYEFVPNKSLDYFLYAQSPK 439
            +    H N++ +LG C          +  ++P  SL   L+  +  
Sbjct: 60  RLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNF 106

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 83.9 bits (208), Expect = 4e-18
 Identities = 19/89 (21%), Positives = 43/89 (48%), Gaps = 1/89 (1%)

Query: 352 NKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGF 410
             LG+G FG+  K     +G+ + +K L R   +  + F  EV ++  L+H N+++ +G 
Sbjct: 16  EVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGV 75

Query: 411 CLEGEEKILVYEFVPNKSLDYFLYAQSPK 439
             + +    + E++   +L   + +   +
Sbjct: 76  LYKDKRLNFITEYIKGGTLRGIIKSMDSQ 104

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 83.4 bits (207), Expect = 5e-18
 Identities = 31/116 (26%), Positives = 53/116 (45%), Gaps = 6/116 (5%)

Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRLSRSSGQGGQEFKNEVVL 395
            +   +     +LGEG FG+V+               +AVK L   +    ++F+ E  L
Sbjct: 11  HIKRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAEL 70

Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPKNNNNWIGQDATR 451
           +  LQH ++V+  G C +G+  I+V+E++ +  L+ FL A  P       GQ    
Sbjct: 71  LTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQA 126

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 82.6 bits (205), Expect = 6e-18
 Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 1/92 (1%)

Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
            +  +  +   ++G G FG V+ G   +  ++A+K + R      ++F  E  ++ KL H
Sbjct: 4   VIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSH 62

Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL 433
             LV+L G CLE     LV EF+ +  L  +L
Sbjct: 63  PKLVQLYGVCLEQAPICLVTEFMEHGCLSDYL 94

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 83.1 bits (206), Expect = 8e-18
 Identities = 34/116 (29%), Positives = 57/116 (49%), Gaps = 6/116 (5%)

Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVL----PSGQEI--AVKRLSRSSGQGGQEFKNEVVL 395
            +   +     +LGEG FG+V+        P   ++  AVK L  +S    Q+F+ E  L
Sbjct: 37  HIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAEL 96

Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPKNNNNWIGQDATR 451
           +  LQH+++VR  G C EG   ++V+E++ +  L+ FL +  P       G+D   
Sbjct: 97  LTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAP 152

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 83.5 bits (207), Expect = 1e-17
 Identities = 25/94 (26%), Positives = 40/94 (42%), Gaps = 2/94 (2%)

Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRL-SRSSGQGGQEFKNEVVLVAKL 399
            +   +     ++G G FGEV+ G L      +AVK            +F  E  ++ + 
Sbjct: 110 VLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQY 169

Query: 400 QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL 433
            H N+VRL+G C + +   +V E V       FL
Sbjct: 170 SHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFL 203

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 81.5 bits (202), Expect = 1e-17
 Identities = 24/104 (23%), Positives = 45/104 (43%), Gaps = 1/104 (0%)

Query: 336 FDFETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVL 395
             + + E+   + +   +LG G FG V  G      ++A+K + +       EF  E  +
Sbjct: 14  LGYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMI-KEGSMSEDEFIEEAKV 72

Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPK 439
           +  L H  LV+L G C +     ++ E++ N  L  +L     +
Sbjct: 73  MMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR 116

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 82.8 bits (205), Expect = 2e-17
 Identities = 34/103 (33%), Positives = 54/103 (52%), Gaps = 5/103 (4%)

Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVL--PSGQEI--AVKRL-SRSSGQGGQEFKNEVVLV 396
           E+   N S D  +G G FGEV  G L  PS +EI  A+K L    + +  ++F  E  ++
Sbjct: 41  ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100

Query: 397 AKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPK 439
            +  H N++RL G   + +  ++V E++ N SLD FL     +
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ 143

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 81.1 bits (201), Expect = 2e-17
 Identities = 26/92 (28%), Positives = 40/92 (43%), Gaps = 1/92 (1%)

Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
           E+     +   +LG G FG V  G      ++AVK + +       EF  E   + KL H
Sbjct: 4   ELKREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMI-KEGSMSEDEFFQEAQTMMKLSH 62

Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL 433
             LV+  G C +     +V E++ N  L  +L
Sbjct: 63  PKLVKFYGVCSKEYPIYIVTEYISNGCLLNYL 94

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 82.0 bits (203), Expect = 2e-17
 Identities = 34/109 (31%), Positives = 54/109 (49%), Gaps = 7/109 (6%)

Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRL-SRSSGQGGQEFKNEVV 394
           EV   N +    LG G FGEVY+G +      PS  ++AVK L    S Q   +F  E +
Sbjct: 26  EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 85

Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPKNNNN 443
           +++K  H+N+VR +G  L+   + ++ E +    L  FL    P+ +  
Sbjct: 86  IISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQP 134

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 81.6 bits (202), Expect = 2e-17
 Identities = 31/135 (22%), Positives = 61/135 (45%), Gaps = 11/135 (8%)

Query: 304 GLCYFIRKAKNKYNAVPEVNADNDITTLESLQFDFETIEVATNNFSTDNKLGEGGFGEVY 363
            L +  +  + ++ A P    +         +      E+  +    +  +G G  GEV 
Sbjct: 13  NLYFQGKLPEPQFYAEPHTYEEPGRAGRSFTR------EIEASRIHIEKIIGSGDSGEVC 66

Query: 364 KGVL--PSGQEI--AVKRL-SRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKI 418
            G L  P  +++  A+K L +  + +  ++F +E  ++ +  H N++RL G    G   +
Sbjct: 67  YGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAM 126

Query: 419 LVYEFVPNKSLDYFL 433
           +V E++ N SLD FL
Sbjct: 127 IVTEYMENGSLDTFL 141

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 81.1 bits (201), Expect = 2e-17
 Identities = 37/116 (31%), Positives = 61/116 (52%), Gaps = 7/116 (6%)

Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVL----PSGQEI--AVKRL-SRSSGQGGQEFKNEVV 394
           E++ +      +LGE  FG+VYKG L    P  Q    A+K L  ++ G   +EF++E +
Sbjct: 5   EISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAM 64

Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPKNNNNWIGQDAT 450
           L A+LQH N+V LLG   + +   +++ +  +  L  FL  +SP ++      D T
Sbjct: 65  LRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRT 120

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 80.8 bits (200), Expect = 3e-17
 Identities = 34/100 (34%), Positives = 46/100 (46%), Gaps = 10/100 (10%)

Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVL--PSGQEI--AVKRL---SRSSGQGGQEFKNEVV 394
            +   +     KLG+G FG V +G    PSG+ +  AVK L     S  +   +F  EV 
Sbjct: 14  LIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVN 73

Query: 395 LVAKLQHRNLVRLLGFCLEGEEKI-LVYEFVPNKSLDYFL 433
            +  L HRNL+RL G  L     + +V E  P  SL   L
Sbjct: 74  AMHSLDHRNLIRLYGVVL--TPPMKMVTELAPLGSLLDRL 111

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 79.9 bits (198), Expect = 5e-17
 Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 4/93 (4%)

Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
            +          +G+G FG+V  G    G ++AVK +   +    Q F  E  ++ +L+H
Sbjct: 17  ALNMKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDATA--QAFLAEASVMTQLRH 73

Query: 402 RNLVRLLGFCLEGEEKI-LVYEFVPNKSLDYFL 433
            NLV+LLG  +E +  + +V E++   SL  +L
Sbjct: 74  SNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYL 106

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 80.9 bits (200), Expect = 7e-17
 Identities = 34/109 (31%), Positives = 54/109 (49%), Gaps = 7/109 (6%)

Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRL-SRSSGQGGQEFKNEVV 394
           EV   N +    LG G FGEVY+G +      PS  ++AVK L    S Q   +F  E +
Sbjct: 67  EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 126

Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPKNNNN 443
           +++K  H+N+VR +G  L+   + ++ E +    L  FL    P+ +  
Sbjct: 127 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQP 175

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 81.2 bits (201), Expect = 9e-17
 Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 4/93 (4%)

Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
            +          +G+G FG+V  G    G ++AVK +   +    Q F  E  ++ +L+H
Sbjct: 189 ALNMKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDATA--QAFLAEASVMTQLRH 245

Query: 402 RNLVRLLGFCLEGEEKI-LVYEFVPNKSLDYFL 433
            NLV+LLG  +E +  + +V E++   SL  +L
Sbjct: 246 SNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYL 278

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 80.0 bits (198), Expect = 1e-16
 Identities = 34/117 (29%), Positives = 55/117 (47%), Gaps = 7/117 (5%)

Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSG------QEIAVKRL-SRSSGQGGQEFKNEVV 394
           E   NN      +GEG FG V++   P          +AVK L   +S     +F+ E  
Sbjct: 43  EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAA 102

Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPKNNNNWIGQDATR 451
           L+A+  + N+V+LLG C  G+   L++E++    L+ FL + SP    +    D + 
Sbjct: 103 LMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLST 159

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 79.2 bits (196), Expect = 1e-16
 Identities = 31/103 (30%), Positives = 52/103 (50%), Gaps = 6/103 (5%)

Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVL--PSGQEI--AVKRLSR-SSGQGGQEFKNEVVLV 396
            +A  +   +  LGEG FGEVY+GV     G++I  AVK   +  +    ++F +E V++
Sbjct: 8   GIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIM 67

Query: 397 AKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPK 439
             L H ++V+L+G   E E   ++ E  P   L ++L      
Sbjct: 68  KNLDHPHIVKLIGIIEE-EPTWIIMELYPYGELGHYLERNKNS 109

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 79.3 bits (196), Expect = 1e-16
 Identities = 27/89 (30%), Positives = 48/89 (53%), Gaps = 7/89 (7%)

Query: 352 NKLGEGGFGEVYKGVLP-----SGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVR 406
            +LG+G FG V           +G+ +AVK+L  S+ +  ++F+ E+ ++  LQH N+V+
Sbjct: 16  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75

Query: 407 LLGFCLEGEEK--ILVYEFVPNKSLDYFL 433
             G C     +   L+ E++P  SL  +L
Sbjct: 76  YKGVCYSAGRRNLKLIMEYLPYGSLRDYL 104

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 79.6 bits (197), Expect = 1e-16
 Identities = 31/116 (26%), Positives = 55/116 (47%), Gaps = 7/116 (6%)

Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRL-SRSSGQGGQEFKNEVV 394
           EVA    +   +LG+G FG VY+GV            +A+K +   +S +   EF NE  
Sbjct: 21  EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 80

Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPKNNNNWIGQDAT 450
           ++ +    ++VRLLG   +G+  +++ E +    L  +L +  P   NN +    +
Sbjct: 81  VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPS 136

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 79.7 bits (197), Expect = 1e-16
 Identities = 29/98 (29%), Positives = 55/98 (56%), Gaps = 6/98 (6%)

Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVL--PSGQE---IAVKRL-SRSSGQGGQEFKNEVVL 395
           E+  +  +    +G G FGEVYKG+L   SG++   +A+K L +  + +   +F  E  +
Sbjct: 40  EIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGI 99

Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL 433
           + +  H N++RL G   + +  +++ E++ N +LD FL
Sbjct: 100 MGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFL 137

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 79.3 bits (196), Expect = 2e-16
 Identities = 27/95 (28%), Positives = 49/95 (51%), Gaps = 7/95 (7%)

Query: 352 NKLGEGGFGEVYKGVLP-----SGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVR 406
            +LG+G FG V           +G+ +AVK+L  S+ +  ++F+ E+ ++  LQH N+V+
Sbjct: 47  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 106

Query: 407 LLGFCLEGEEK--ILVYEFVPNKSLDYFLYAQSPK 439
             G C     +   L+ E++P  SL  +L     +
Sbjct: 107 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER 141

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 78.9 bits (195), Expect = 2e-16
 Identities = 24/95 (25%), Positives = 43/95 (45%), Gaps = 7/95 (7%)

Query: 352 NKLGEGGFGEVYKGVLP-----SGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVR 406
           ++LG+G FG V           +G  +AVK+L  S     ++F+ E+ ++  L    +V+
Sbjct: 29  SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 88

Query: 407 LLGFCLEGEEK--ILVYEFVPNKSLDYFLYAQSPK 439
             G       +   LV E++P+  L  FL     +
Sbjct: 89  YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR 123

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 78.6 bits (194), Expect = 2e-16
 Identities = 23/105 (21%), Positives = 45/105 (42%), Gaps = 11/105 (10%)

Query: 337 DFETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRL--SRSSGQGGQEFKNEVV 394
            FE +E+          +G+G FG+VY G      E+A++ +   R +    + FK EV+
Sbjct: 31  PFEQLEI-------GELIGKGRFGQVYHGRW--HGEVAIRLIDIERDNEDQLKAFKREVM 81

Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPK 439
              + +H N+V  +G C+      ++      ++L   +      
Sbjct: 82  AYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIV 126

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 78.0 bits (193), Expect = 2e-16
 Identities = 23/103 (22%), Positives = 45/103 (43%), Gaps = 6/103 (5%)

Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVL--PSGQEI--AVKRL-SRSSGQGGQEFKNEVVLV 396
           E+          +GEG FG+V++G+   P    +  A+K   + +S    ++F  E + +
Sbjct: 11  EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 70

Query: 397 AKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPK 439
            +  H ++V+L+G   E     ++ E      L  FL  +   
Sbjct: 71  RQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYS 112

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 78.1 bits (193), Expect = 4e-16
 Identities = 35/125 (28%), Positives = 54/125 (43%), Gaps = 11/125 (8%)

Query: 332 ESLQFDFETIEVATNNFSTDNKLGEGGFGEVYKGVL--PSGQEI--AVKRLSR--SSGQG 385
           E LQ   E + +  N       LGEG FG V +G L    G  +  AVK +    SS + 
Sbjct: 20  EELQNKLEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQRE 79

Query: 386 GQEFKNEVVLVAKLQHRNLVRLLGFCLEGE-----EKILVYEFVPNKSLDYFLYAQSPKN 440
            +EF +E   +    H N++RLLG C+E       + +++  F+    L  +L     + 
Sbjct: 80  IEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLET 139

Query: 441 NNNWI 445
               I
Sbjct: 140 GPKHI 144

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 78.1 bits (193), Expect = 4e-16
 Identities = 29/124 (23%), Positives = 50/124 (40%), Gaps = 12/124 (9%)

Query: 332 ESLQFDFETIEVATNNFSTDNKLGEGGFGEVYKGVL----PSGQEIAVKRL--SRSSGQG 385
           + L+   E + +    F+    LG+G FG V +  L     S  ++AVK L     +   
Sbjct: 9   DELKEKLEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSD 68

Query: 386 GQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKI------LVYEFVPNKSLDYFLYAQSPK 439
            +EF  E   + +  H ++ +L+G  L    K       ++  F+ +  L  FL A    
Sbjct: 69  IEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIG 128

Query: 440 NNNN 443
            N  
Sbjct: 129 ENPF 132

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 76.9 bits (190), Expect = 6e-16
 Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 5/87 (5%)

Query: 351 DNKLGEGGFGEVYKGVL-PSGQEI--AVKRL-SRSSGQGGQEFKNEVVLVAKLQHRNLVR 406
           D +LG G FG V +GV     ++I  A+K L   +     +E   E  ++ +L +  +VR
Sbjct: 15  DIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVR 74

Query: 407 LLGFCLEGEEKILVYEFVPNKSLDYFL 433
           L+G C   E  +LV E      L  FL
Sbjct: 75  LIGVCQA-EALMLVMEMAGGGPLHKFL 100

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 76.9 bits (190), Expect = 7e-16
 Identities = 30/105 (28%), Positives = 50/105 (47%), Gaps = 6/105 (5%)

Query: 341 IEVATNNFSTDNKLGEGGFGEVYKGVL--PSGQEI--AVKRLSR-SSGQGGQEFKNEVVL 395
           I  ++     +  +G G FG VY G L    G++I  AVK L+R +      +F  E ++
Sbjct: 20  IGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII 79

Query: 396 VAKLQHRNLVRLLGFCLEGEEKIL-VYEFVPNKSLDYFLYAQSPK 439
           +    H N++ LLG CL  E   L V  ++ +  L  F+  ++  
Sbjct: 80  MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN 124

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 76.6 bits (189), Expect = 9e-16
 Identities = 32/115 (27%), Positives = 51/115 (44%), Gaps = 8/115 (6%)

Query: 327 DITTLESLQFDFETIEVATNNFSTDNKLGEGGFGEVYKGVLP-----SGQEIAVKRL-SR 380
           DI + +    + +              LGEG FG+V           +G+++AVK L   
Sbjct: 2   DIVSEKKPATEVDPTHFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPE 61

Query: 381 SSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEK--ILVYEFVPNKSLDYFL 433
           S G    + K E+ ++  L H N+V+  G C E       L+ EF+P+ SL  +L
Sbjct: 62  SGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL 116

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 76.5 bits (189), Expect = 1e-15
 Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 2/93 (2%)

Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQ 400
           E+   + +  +KLG G +GEVY+GV       +AVK L +      +EF  E  ++ +++
Sbjct: 9   EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIK 67

Query: 401 HRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL 433
           H NLV+LLG C       ++ EF+   +L  +L
Sbjct: 68  HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 100

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 76.6 bits (189), Expect = 1e-15
 Identities = 32/135 (23%), Positives = 51/135 (37%), Gaps = 12/135 (8%)

Query: 323 NADNDITTLESLQFDFETIEVATNNFSTDNKLGEGGFGEVYKGVL-----PSGQEIAVKR 377
           +    +  L     D  T             LGEG FG+V           +G+ +AVK 
Sbjct: 10  HHHGALEVLFQGPGD-PT-VFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKA 67

Query: 378 LSRSSGQGG-QEFKNEVVLVAKLQHRNLVRLLGFCLEGEEK--ILVYEFVPNKSLDYFLY 434
           L   +G      +K E+ ++  L H ++++  G C +       LV E+VP  SL  +L 
Sbjct: 68  LKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLP 127

Query: 435 AQSPKNNN--NWIGQ 447
             S        +  Q
Sbjct: 128 RHSIGLAQLLLFAQQ 142

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 76.5 bits (189), Expect = 1e-15
 Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 7/94 (7%)

Query: 346 NNFSTDNKLGEGGFGEVYKGVLPSGQE-----IAVKRL-SRSSGQGGQEFKNEVVLVAKL 399
             F     LG G FG VYKG+     E     +A+K L   +S +  +E  +E  ++A +
Sbjct: 15  TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74

Query: 400 QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL 433
            + ++ RLLG CL      L+ + +P   L  ++
Sbjct: 75  DNPHVCRLLGICLT-STVQLITQLMPFGCLLDYV 107

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 76.5 bits (189), Expect = 1e-15
 Identities = 26/108 (24%), Positives = 44/108 (40%), Gaps = 7/108 (6%)

Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRL-SRSSGQGGQEFKNEVV 394
           E    N      LGEG FG+V K              +AVK L   +S    ++  +E  
Sbjct: 19  EFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFN 78

Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPKNNN 442
           ++ ++ H ++++L G C +    +L+ E+    SL  FL         
Sbjct: 79  VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPG 126

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 75.8 bits (187), Expect = 2e-15
 Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 12/105 (11%)

Query: 337 DFETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRS--SGQGGQEFKNEVV 394
               I V         ++G G FG VYKG      ++AVK L+ +  + Q  Q FKNEV 
Sbjct: 22  PDGQITVG-------QRIGSGSFGTVYKGKW--HGDVAVKMLNVTAPTPQQLQAFKNEVG 72

Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPK 439
           ++ K +H N++  +G+    +  I V ++    SL + L+A   K
Sbjct: 73  VLRKTRHVNILLFMGYSTAPQLAI-VTQWCEGSSLYHHLHASETK 116

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 76.2 bits (188), Expect = 2e-15
 Identities = 28/98 (28%), Positives = 42/98 (42%), Gaps = 7/98 (7%)

Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQE-----IAVKRLSRSSG-QGGQEFKNEVVL 395
                       LG G FG V+KGV     E     + +K +   SG Q  Q   + ++ 
Sbjct: 9   IFKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLA 68

Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL 433
           +  L H ++VRLLG C       LV +++P  SL   +
Sbjct: 69  IGSLDHAHIVRLLGLCPG-SSLQLVTQYLPLGSLLDHV 105

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 75.4 bits (186), Expect = 2e-15
 Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 6/88 (6%)

Query: 351 DNKLGEGGFGEVYKGVLPSG---QEIAVKRL--SRSSGQGGQEFKNEVVLVAKLQHRNLV 405
           D +LG G FG V KG        + +AVK L    +      E   E  ++ +L +  +V
Sbjct: 22  DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 81

Query: 406 RLLGFCLEGEEKILVYEFVPNKSLDYFL 433
           R++G C   E  +LV E      L+ +L
Sbjct: 82  RMIGICE-AESWMLVMEMAELGPLNKYL 108

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 75.8 bits (187), Expect = 2e-15
 Identities = 28/112 (25%), Positives = 48/112 (42%), Gaps = 5/112 (4%)

Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQE---IAVKRL-SRSSGQGGQEFKNEVVLVA 397
            +  N+    + +GEG FG+V K  +         A+KR+   +S    ++F  E+ ++ 
Sbjct: 21  VLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLC 80

Query: 398 KL-QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPKNNNNWIGQD 448
           KL  H N++ LLG C       L  E+ P+ +L  FL        +      
Sbjct: 81  KLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIA 132

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 77.3 bits (190), Expect = 3e-15
 Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 5/88 (5%)

Query: 350 TDNKLGEGGFGEVYKGVL-PSGQEI--AVKRL-SRSSGQGGQEFKNEVVLVAKLQHRNLV 405
            D +LG G FG V +GV     ++I  A+K L   +     +E   E  ++ +L +  +V
Sbjct: 340 ADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIV 399

Query: 406 RLLGFCLEGEEKILVYEFVPNKSLDYFL 433
           RL+G C   E  +LV E      L  FL
Sbjct: 400 RLIGVCQA-EALMLVMEMAGGGPLHKFL 426

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 75.9 bits (187), Expect = 3e-15
 Identities = 24/119 (20%), Positives = 49/119 (41%), Gaps = 10/119 (8%)

Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVL--------PSGQEIAVKRL-SRSSGQGGQEFKNE 392
           E   +  +    LGEG FG+V                  +AVK L   ++ +   +  +E
Sbjct: 77  EFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 136

Query: 393 VVLVAKL-QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPKNNNNWIGQDAT 450
           + ++  + +H+N++ LLG C +     ++ E+    +L  +L A+ P         +  
Sbjct: 137 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRV 195

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 76.8 bits (189), Expect = 3e-15
 Identities = 23/103 (22%), Positives = 45/103 (43%), Gaps = 6/103 (5%)

Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVL--PSGQEI--AVKRL-SRSSGQGGQEFKNEVVLV 396
           E+          +GEG FG+V++G+   P    +  A+K   + +S    ++F  E + +
Sbjct: 386 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTM 445

Query: 397 AKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPK 439
            +  H ++V+L+G   E     ++ E      L  FL  +   
Sbjct: 446 RQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKFS 487

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 75.6 bits (186), Expect = 4e-15
 Identities = 30/105 (28%), Positives = 50/105 (47%), Gaps = 6/105 (5%)

Query: 341 IEVATNNFSTDNKLGEGGFGEVYKGVL--PSGQEI--AVKRLSR-SSGQGGQEFKNEVVL 395
           I  ++     +  +G G FG VY G L    G++I  AVK L+R +      +F  E ++
Sbjct: 84  IGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII 143

Query: 396 VAKLQHRNLVRLLGFCLEGEEKIL-VYEFVPNKSLDYFLYAQSPK 439
           +    H N++ LLG CL  E   L V  ++ +  L  F+  ++  
Sbjct: 144 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN 188

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 76.3 bits (188), Expect = 4e-15
 Identities = 31/106 (29%), Positives = 56/106 (52%), Gaps = 2/106 (1%)

Query: 329 TTLESLQFDFETIEVATNNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSGQGGQ 387
            T+  +  +++  E+   + +  +KLG G +GEVY+GV       +AVK L +      +
Sbjct: 203 PTIYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVE 261

Query: 388 EFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL 433
           EF  E  ++ +++H NLV+LLG C       ++ EF+   +L  +L
Sbjct: 262 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 307

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 75.0 bits (185), Expect = 4e-15
 Identities = 26/126 (20%), Positives = 53/126 (42%), Gaps = 9/126 (7%)

Query: 332 ESLQFDFETIEVATNNFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRL-SRSSGQ 384
           E L +D    E   +       LG G FG+V +          + + +AVK L   ++  
Sbjct: 13  ERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS 72

Query: 385 GGQEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKI-LVYEFVPNKSLDYFLYAQSPKNNN 442
             +   +E+ ++  +  H N+V LLG C +    + ++ EF    +L  +L ++  +   
Sbjct: 73  EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 132

Query: 443 NWIGQD 448
             +  +
Sbjct: 133 YKVAPE 138

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 75.0 bits (185), Expect = 4e-15
 Identities = 40/152 (26%), Positives = 66/152 (43%), Gaps = 13/152 (8%)

Query: 304 GLCYFIRKAKNKYN---AVPEVNADNDITTLESLQFDF-ETIEVATNNFSTDNKLGEGGF 359
           G+ Y  ++ K KY     + E    N  T ++  Q  + E  E   NN      LG G F
Sbjct: 1   GVDYKYKQ-KPKYQVRWKIIESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAF 59

Query: 360 GEVYKGVL------PSGQEIAVKRL-SRSSGQGGQEFKNEVVLVAKL-QHRNLVRLLGFC 411
           G+V +          +  ++AVK L S +     +   +E+ +++ L QH N+V LLG C
Sbjct: 60  GKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGAC 119

Query: 412 LEGEEKILVYEFVPNKSLDYFLYAQSPKNNNN 443
             G   +++ E+     L  FL  +S     +
Sbjct: 120 THGGPVLVITEYCCYGDLLNFLRRKSRVLETD 151

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 74.6 bits (184), Expect = 4e-15
 Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 6/95 (6%)

Query: 351 DNKLGEGGFGEVYKGVLPSGQE----IAVKRLSR-SSGQGGQEFKNEVVLVAKLQHRNLV 405
           D  +G+G FG VY G      +     A+K LSR +  Q  + F  E +L+  L H N++
Sbjct: 26  DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVL 85

Query: 406 RLLGFCLEGEEKIL-VYEFVPNKSLDYFLYAQSPK 439
            L+G  L  E     +  ++ +  L  F+ +    
Sbjct: 86  ALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRN 120

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 74.6 bits (184), Expect = 6e-15
 Identities = 24/117 (20%), Positives = 49/117 (41%), Gaps = 10/117 (8%)

Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLP--------SGQEIAVKRL-SRSSGQGGQEFKNE 392
           E   +  +    LGEG FG+V                  +AVK L   ++ +   +  +E
Sbjct: 31  EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90

Query: 393 VVLVAKL-QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPKNNNNWIGQD 448
           + ++  + +H+N++ LLG C +     ++ E+    +L  +L A+ P         +
Sbjct: 91  MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIN 147

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 73.8 bits (182), Expect = 7e-15
 Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 2/92 (2%)

Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
           EV         +LG G FGEV+ G      ++AVK L +        F  E  L+ +LQH
Sbjct: 9   EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQH 67

Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL 433
           + LVRL     + E   ++ E++ N SL  FL
Sbjct: 68  QRLVRLYAVVTQ-EPIYIITEYMENGSLVDFL 98

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 73.4 bits (181), Expect = 1e-14
 Identities = 27/115 (23%), Positives = 45/115 (39%), Gaps = 8/115 (6%)

Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRL-SRSSGQGGQEFKNEVV 394
           E   N  S    LG G FG+V +          +   +AVK L   +     +   +E+ 
Sbjct: 19  EFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELK 78

Query: 395 LVAKL-QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPKNNNNWIGQD 448
           +++ L  H N+V LLG C  G   +++ E+     L  FL  +      +     
Sbjct: 79  VLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPA 133

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 73.1 bits (180), Expect = 2e-14
 Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 7/94 (7%)

Query: 346 NNFSTDNKLGEGGFGEVYKGVLPSGQE-----IAVKRL-SRSSGQGGQEFKNEVVLVAKL 399
             F     LG G FG VYKG+     E     +A+K L   +S +  +E  +E  ++A +
Sbjct: 15  TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74

Query: 400 QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL 433
            + ++ RLLG CL      L+ + +P   L  ++
Sbjct: 75  DNPHVCRLLGICLT-STVQLITQLMPFGCLLDYV 107

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 74.0 bits (182), Expect = 2e-14
 Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 2/92 (2%)

Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
           E+   +   + KLG G FGEV+        ++AVK + +      + F  E  ++  LQH
Sbjct: 184 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQH 242

Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL 433
             LV+L     + E   ++ EF+   SL  FL
Sbjct: 243 DKLVKLHAVVTK-EPIYIITEFMAKGSLLDFL 273

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 73.6 bits (181), Expect = 2e-14
 Identities = 28/155 (18%), Positives = 54/155 (34%), Gaps = 21/155 (13%)

Query: 304 GLCYFIRKAKNKYNAVPEVNADNDITTLESLQFDFETIEVATNNFSTDNKLGEGGFGEVY 363
                    +     V E     D              E+  +       LGEG FG+V 
Sbjct: 38  IPTTENLYFQGMLAGVSEYELPED-----------PRWELPRDRLVLGKPLGEGAFGQVV 86

Query: 364 KGVLP--------SGQEIAVKRL-SRSSGQGGQEFKNEVVLVAKL-QHRNLVRLLGFCLE 413
                           ++AVK L S ++ +   +  +E+ ++  + +H+N++ LLG C +
Sbjct: 87  LAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 146

Query: 414 GEEKILVYEFVPNKSLDYFLYAQSPKNNNNWIGQD 448
                ++ E+    +L  +L A+ P          
Sbjct: 147 DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPS 181

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 72.1 bits (177), Expect = 7e-14
 Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 2/92 (2%)

Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
           E+   +   + KLG+G FGEV+ G       +A+K L +      + F  E  ++ KL+H
Sbjct: 180 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 238

Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL 433
             LV+L     E E   +V E++   SL  FL
Sbjct: 239 EKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFL 269

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 72.2 bits (177), Expect = 9e-14
 Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 2/92 (2%)

Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
           E+   +   + KLG+G FGEV+ G       +A+K L +      + F  E  ++ KL+H
Sbjct: 263 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 321

Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL 433
             LV+L     E E   +V E++   SL  FL
Sbjct: 322 EKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFL 352

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 70.8 bits (174), Expect = 1e-13
 Identities = 27/118 (22%), Positives = 49/118 (41%), Gaps = 8/118 (6%)

Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRL-SRSSGQGGQEFKNEVV 394
           E    N      LG G FG+V               ++AVK L  ++     +   +E+ 
Sbjct: 41  EFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELK 100

Query: 395 LVAKL-QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPKNNNNWIGQDATR 451
           ++ +L  H N+V LLG C       L++E+     L  +L ++  K + + I  +  +
Sbjct: 101 MMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQK 158

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 70.0 bits (172), Expect = 1e-13
 Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 1/77 (1%)

Query: 354 LGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCL 412
           LG+G +G VY G  L +   IA+K +     +  Q    E+ L   L+H+N+V+ LG   
Sbjct: 30  LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 89

Query: 413 EGEEKILVYEFVPNKSL 429
           E     +  E VP  SL
Sbjct: 90  ENGFIKIFMEQVPGGSL 106

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 69.8 bits (171), Expect = 2e-13
 Identities = 19/89 (21%), Positives = 40/89 (44%), Gaps = 10/89 (11%)

Query: 351 DNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNE--VVLVAKLQHRNLVRLL 408
             ++G+G +GEV+ G    G+++AVK            +  E  +     ++H N++  +
Sbjct: 42  VKQIGKGRYGEVWMGKW-RGEKVAVKVFFT---TEEASWFRETEIYQTVLMRHENILGFI 97

Query: 409 GFCLEGEEKI----LVYEFVPNKSLDYFL 433
              ++G        L+ ++  N SL  +L
Sbjct: 98  AADIKGTGSWTQLYLITDYHENGSLYDYL 126

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 68.5 bits (168), Expect = 5e-13
 Identities = 19/88 (21%), Positives = 38/88 (43%), Gaps = 10/88 (11%)

Query: 352 NKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNE--VVLVAKLQHRNLVRLLG 409
             +G+G +GEV++G    G+ +AVK  S    +  + +  E  +     L+H N++  + 
Sbjct: 14  ECVGKGRYGEVWRGSW-QGENVAVKIFSS---RDEKSWFRETELYNTVMLRHENILGFIA 69

Query: 410 FCLEGEEKI----LVYEFVPNKSLDYFL 433
             +          L+  +    SL  +L
Sbjct: 70  SDMTSRHSSTQLWLITHYHEMGSLYDYL 97

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 68.2 bits (167), Expect = 9e-13
 Identities = 26/111 (23%), Positives = 44/111 (39%), Gaps = 6/111 (5%)

Query: 320 PEVNADNDITTLESLQFDFETIEVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRL 378
           PE   +  +   E L+          +  +   ++G G FGEV++     +G + AVK++
Sbjct: 32  PETEDNEGVLLTEKLKPVDYEYREEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKV 91

Query: 379 SRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSL 429
                +       E+V  A L    +V L G   EG    +  E +   SL
Sbjct: 92  RLEVFR-----VEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSL 137

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 66.6 bits (163), Expect = 2e-12
 Identities = 28/107 (26%), Positives = 44/107 (41%), Gaps = 5/107 (4%)

Query: 340 TIEVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAK 398
            + +   ++    KLGEGGF  V     L  G   A+KR+     Q  +E + E  +   
Sbjct: 23  MVIIDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRL 82

Query: 399 LQHRNLVRLLGFCLE----GEEKILVYEFVPNKSLDYFLYAQSPKNN 441
             H N++RL+ +CL       E  L+  F    +L   +     K N
Sbjct: 83  FNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGN 129

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 66.6 bits (163), Expect = 3e-12
 Identities = 21/100 (21%), Positives = 45/100 (45%), Gaps = 4/100 (4%)

Query: 329 TTLESLQFDFETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRS--SGQGG 386
             L +    F+++ V    +S   ++G GG  +V++ +    Q  A+K ++      Q  
Sbjct: 11  VDLGTENLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTL 70

Query: 387 QEFKNEVVLVAKLQHRNL--VRLLGFCLEGEEKILVYEFV 424
             ++NE+  + KLQ  +   +RL  + +  +   +V E  
Sbjct: 71  DSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECG 110

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 65.6 bits (160), Expect = 7e-12
 Identities = 22/89 (24%), Positives = 41/89 (46%), Gaps = 10/89 (11%)

Query: 351 DNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNE--VVLVAKLQHRNLVRLL 408
              +G+G FGEV++G    G+E+AVK     S +  + +  E  +     L+H N++  +
Sbjct: 47  QESIGKGRFGEVWRGKW-RGEEVAVKIF---SSREERSWFREAEIYQTVMLRHENILGFI 102

Query: 409 GFCLEGEEKI----LVYEFVPNKSLDYFL 433
               +         LV ++  + SL  +L
Sbjct: 103 AADNKDNGTWTQLWLVSDYHEHGSLFDYL 131

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 65.1 bits (159), Expect = 1e-11
 Identities = 24/110 (21%), Positives = 48/110 (43%), Gaps = 5/110 (4%)

Query: 320 PEVNADNDITTLESLQFDFETIEVATNNFS----TDNKLGEGGFGEVYKGV-LPSGQEIA 374
           P++N  +        ++  + +EV   +         +LG G FG V++ V   +G+   
Sbjct: 21  PKINDYDKFYEDIWKKYVPQPVEVKQGSVYDYYDILEELGSGAFGVVHRCVEKATGRVFV 80

Query: 375 VKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFV 424
            K ++          KNE+ ++ +L H  L+ L     +  E +L+ EF+
Sbjct: 81  AKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFL 130

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 64.3 bits (157), Expect = 2e-11
 Identities = 22/91 (24%), Positives = 42/91 (46%), Gaps = 6/91 (6%)

Query: 339 ETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRS--SGQGGQEFKNEVVLV 396
           E I V    +S   ++G GG  +V++ +    Q  A+K ++      Q    ++NE+  +
Sbjct: 2   ECISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYL 61

Query: 397 AKLQHRNL--VRLLGFCLEGEEKI-LVYEFV 424
            KLQ  +   +RL  +    ++ I +V E  
Sbjct: 62  NKLQQHSDKIIRLYDY-EITDQYIYMVMECG 91

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 64.5 bits (157), Expect = 3e-11
 Identities = 38/183 (20%), Positives = 65/183 (35%), Gaps = 27/183 (14%)

Query: 246 RYEFYPF-YNLSATSPP--PPAPVLLPPPPPGSARGKSGISSSTIIAIVAPIAVTAVLFI 302
           +YEF     N    S P  P APVL+P       RG        I+     ++       
Sbjct: 77  QYEFRIIAENKHGQSKPCEPTAPVLIPGDERKRRRGYDVDEQGKIVRGKGTVS------- 129

Query: 303 VGLCYFIRKAKNKYNAVPEVNADNDITTLESLQFDFETIEVATNNFSTDNKLGEGGFGEV 362
                      N  N V ++        +E             +++    +LG G FG V
Sbjct: 130 ----------SNYDNYVFDIWKQYYPQPVEIKHDHVL------DHYDIHEELGTGAFGVV 173

Query: 363 YKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY 421
           ++     +G   A K +        +  + E+  ++ L+H  LV L     +  E +++Y
Sbjct: 174 HRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIY 233

Query: 422 EFV 424
           EF+
Sbjct: 234 EFM 236

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 62.7 bits (153), Expect = 4e-11
 Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 7/90 (7%)

Query: 351 DNKLGEGGFGEVYKGV-LPSGQEIAVK--RLSRSSGQGGQEFKNEVVLVAKLQHRNLVRL 407
           D ++G G F  VYKG+   +  E+A    +  + +    Q FK E  ++  LQH N+VR 
Sbjct: 31  DIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRF 90

Query: 408 LGFCLEGEEK----ILVYEFVPNKSLDYFL 433
                   +     +LV E + + +L  +L
Sbjct: 91  YDSWESTVKGKKCIVLVTELMTSGTLKTYL 120

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 62.3 bits (151), Expect = 9e-11
 Identities = 28/122 (22%), Positives = 50/122 (40%), Gaps = 9/122 (7%)

Query: 332 ESLQFDFETIEVATNNFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRLSRSSGQG 385
           E L +D    E   +       LG G FG+V +          + + +AVK L   +   
Sbjct: 8   ERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS 67

Query: 386 -GQEFKNEV-VLVAKLQHRNLVRLLGFCLEGEEKILV-YEFVPNKSLDYFLYAQSPKNNN 442
             +   +E+ +L+    H N+V LLG C +    ++V  EF    +L  +L ++  +   
Sbjct: 68  EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 127

Query: 443 NW 444
             
Sbjct: 128 YK 129

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 61.8 bits (150), Expect = 1e-10
 Identities = 21/90 (23%), Positives = 41/90 (45%), Gaps = 4/90 (4%)

Query: 339 ETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRS--SGQGGQEFKNEVVLV 396
           E I V    +S   ++G GG  +V++ +    Q  A+K ++      Q    ++NE+  +
Sbjct: 49  ECISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYL 108

Query: 397 AKLQHRNL--VRLLGFCLEGEEKILVYEFV 424
            KLQ  +   +RL  + +  +   +V E  
Sbjct: 109 NKLQQHSDKIIRLYDYEITDQYIYMVMECG 138

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 61.2 bits (149), Expect = 1e-10
 Identities = 23/89 (25%), Positives = 40/89 (44%), Gaps = 2/89 (2%)

Query: 345 TNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRN 403
            ++F     LG+G FG+V K       +  A+K++  +  +      +EV+L+A L H+ 
Sbjct: 5   ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEK-LSTILSEVMLLASLNHQY 63

Query: 404 LVRLLGFCLEGEEKILVYEFVPNKSLDYF 432
           +VR     LE    +     V  KS  + 
Sbjct: 64  VVRYYAAWLERRNFVKPMTAVKKKSTLFI 92

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 60.8 bits (148), Expect = 2e-10
 Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 5/90 (5%)

Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNL 404
            +F     +G GGFG+V+K      G+   +KR+  ++    ++ + EV  +AKL H N+
Sbjct: 11  MDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNI 66

Query: 405 VRLLGFCLEGEEKILVYEFVPNKSLDYFLY 434
           V   G     +          ++S    L+
Sbjct: 67  VHYNGCWDGFDYDPETSSKNSSRSKTKCLF 96

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 60.5 bits (147), Expect = 2e-10
 Identities = 23/94 (24%), Positives = 41/94 (43%), Gaps = 5/94 (5%)

Query: 343 VATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQE-FKNEVVLVAKLQ 400
            + + +   + LG+G    V++G    +G   A+K  +  S     +    E  ++ KL 
Sbjct: 6   TSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLN 65

Query: 401 HRNLVRLLGF--CLEGEEKILVYEFVPNKSL-DY 431
           H+N+V+L           K+L+ EF P  SL   
Sbjct: 66  HKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTV 99

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 60.3 bits (147), Expect = 3e-10
 Identities = 19/81 (23%), Positives = 37/81 (45%), Gaps = 6/81 (7%)

Query: 354 LGEGGFGEVYKGV-LPSGQEIAVKRLSRSS-GQGGQE--FKNEVVLVAKLQHRNLVRLLG 409
           LG+GGF + ++     + +  A K + +S   +  Q      E+ +   L H+++V   G
Sbjct: 23  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82

Query: 410 FCLEGEEKI-LVYEFVPNKSL 429
              E  + + +V E    +SL
Sbjct: 83  -FFEDNDFVFVVLELCRRRSL 102

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 60.0 bits (146), Expect = 4e-10
 Identities = 19/81 (23%), Positives = 37/81 (45%), Gaps = 6/81 (7%)

Query: 354 LGEGGFGEVYKGV-LPSGQEIAVKRLSRSS-GQGGQE--FKNEVVLVAKLQHRNLVRLLG 409
           LG+GGF + ++     + +  A K + +S   +  Q      E+ +   L H+++V   G
Sbjct: 49  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108

Query: 410 FCLEGEEKI-LVYEFVPNKSL 429
              E  + + +V E    +SL
Sbjct: 109 -FFEDNDFVFVVLELCRRRSL 128

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 60.2 bits (146), Expect = 4e-10
 Identities = 25/104 (24%), Positives = 45/104 (43%), Gaps = 6/104 (5%)

Query: 343 VATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQE-FKNEVVLVAKLQ 400
            + + +   + LG+G    V++G    +G   A+K  +  S     +    E  ++ KL 
Sbjct: 6   TSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLN 65

Query: 401 HRNLVRLLGF--CLEGEEKILVYEFVPNKSLDYFLYAQSPKNNN 442
           H+N+V+L           K+L+ EF P  SL  +   + P N  
Sbjct: 66  HKNIVKLFAIEEETTTRHKVLIMEFCPCGSL--YTVLEEPSNAY 107

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 59.7 bits (145), Expect = 5e-10
 Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 1/84 (1%)

Query: 348 FSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVR 406
             +  K+GEG  G V       SG+++AVK +     Q  +   NEVV++   QH N+V 
Sbjct: 47  LDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVE 106

Query: 407 LLGFCLEGEEKILVYEFVPNKSLD 430
           +    L GEE  ++ EF+   +L 
Sbjct: 107 MYKSYLVGEELWVLMEFLQGGALT 130

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 59.7 bits (145), Expect = 5e-10
 Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 7/96 (7%)

Query: 336 FDFETIEVATNNFSTD------NKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQE 388
           FD   +       ++         LG G FG+V+K     +G ++A K +     +  +E
Sbjct: 73  FDHRIVTAKQGAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEE 132

Query: 389 FKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFV 424
            KNE+ ++ +L H NL++L        + +LV E+V
Sbjct: 133 VKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYV 168

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 59.3 bits (144), Expect = 5e-10
 Identities = 27/93 (29%), Positives = 38/93 (40%), Gaps = 4/93 (4%)

Query: 345 TNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKR--LSRSSGQGGQEFKNEVVLVAKL-Q 400
           T  F    K+G G FG V+K V    G   A+KR     +     Q    EV   A L Q
Sbjct: 10  TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 69

Query: 401 HRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL 433
           H ++VR      E +  ++  E+    SL   +
Sbjct: 70  HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI 102

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 59.2 bits (144), Expect = 6e-10
 Identities = 22/83 (26%), Positives = 48/83 (57%), Gaps = 1/83 (1%)

Query: 348 FSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVR 406
           ++   K+G+G  G VY  + + +GQE+A+++++       +   NE++++ + ++ N+V 
Sbjct: 22  YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 81

Query: 407 LLGFCLEGEEKILVYEFVPNKSL 429
            L   L G+E  +V E++   SL
Sbjct: 82  YLDSYLVGDELWVVMEYLAGGSL 104

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 58.3 bits (142), Expect = 1e-09
 Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 8/82 (9%)

Query: 354 LGEGGFGEVYKGV-LPSGQEIAVKRLSRS----SGQGGQEFKNEVVLVAKLQHRNLVRLL 408
           LG+G F  VY+   + +G E+A+K + +     +G   +  +NEV +  +L+H +++ L 
Sbjct: 19  LGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQR-VQNEVKIHCQLKHPSILELY 77

Query: 409 GFCLEGEEKI-LVYEFVPNKSL 429
               E    + LV E   N  +
Sbjct: 78  N-YFEDSNYVYLVLEMCHNGEM 98

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 58.5 bits (142), Expect = 1e-09
 Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 1/77 (1%)

Query: 348 FSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVR 406
           +    +LG+G FG+VYK     +G   A K +   S +  +++  E+ ++A   H  +V+
Sbjct: 21  WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVK 80

Query: 407 LLGFCLEGEEKILVYEF 423
           LLG      +  ++ EF
Sbjct: 81  LLGAYYHDGKLWIMIEF 97

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 58.5 bits (142), Expect = 1e-09
 Identities = 23/99 (23%), Positives = 42/99 (42%), Gaps = 4/99 (4%)

Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRL---SRSSGQGGQEFKNEVVLVAKLQH 401
            NF  + K+G G F EVY+   L  G  +A+K++        +   +   E+ L+ +L H
Sbjct: 32  ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNH 91

Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPKN 440
            N+++     +E  E  +V E      L   +     + 
Sbjct: 92  PNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQK 130

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 57.6 bits (140), Expect = 2e-09
 Identities = 20/81 (24%), Positives = 36/81 (44%), Gaps = 2/81 (2%)

Query: 345 TNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRN 403
              +     LG G FG V++ V   S +    K +    G      K E+ ++   +HRN
Sbjct: 4   YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK-GTDQVLVKKEISILNIARHRN 62

Query: 404 LVRLLGFCLEGEEKILVYEFV 424
           ++ L       EE ++++EF+
Sbjct: 63  ILHLHESFESMEELVMIFEFI 83

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 58.5 bits (142), Expect = 2e-09
 Identities = 25/96 (26%), Positives = 41/96 (42%), Gaps = 5/96 (5%)

Query: 333 SLQFDFETIEVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRS--SGQGGQEF 389
           S + +          ++    LG+G FGEV K     + QE AVK ++++    +     
Sbjct: 9   SGRENLYFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTI 68

Query: 390 KNEVVLVAKLQHRNLVRLLGFCLEGEEKI-LVYEFV 424
             EV L+ KL H N+++L     E      +V E  
Sbjct: 69  LREVELLKKLDHPNIMKLFEIL-EDSSSFYIVGELY 103

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 57.8 bits (140), Expect = 3e-09
 Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 5/84 (5%)

Query: 345 TNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRS--SGQGGQEFKNEVVLVAKLQH 401
           +  +    KLG G +GEV       +  E A+K + ++  S     +   EV ++  L H
Sbjct: 36  SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDH 95

Query: 402 RNLVRLLGFCLEGEEKI-LVYEFV 424
            N+++L  F  E +    LV E  
Sbjct: 96  PNIMKLYDFF-EDKRNYYLVMECY 118

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 57.3 bits (138), Expect = 3e-09
 Identities = 16/111 (14%), Positives = 33/111 (29%), Gaps = 8/111 (7%)

Query: 339 ETIEVATNNFSTDNKLGEGGFGEVYKGV------LPSGQEIAVKRLSRSSGQGGQEFKNE 392
              ++ +      + LGEG F +VY+          + Q+  +K    ++          
Sbjct: 58  TEFQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQL 117

Query: 393 VVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPKNNNN 443
           +  +        ++     L     +LV E     +L         KN   
Sbjct: 118 MERLKPSMQHMFMKFYSAHLFQNGSVLVGELYSYGTL--LNAINLYKNTPE 166

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 57.4 bits (138), Expect = 5e-09
 Identities = 22/104 (21%), Positives = 43/104 (41%), Gaps = 10/104 (9%)

Query: 347 NFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQE-FKNEVVLVAKLQHRNL 404
            +    +LG GGFG V + +   +G+++A+K+  +      +E +  E+ ++ KL H N+
Sbjct: 15  PWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNV 74

Query: 405 VRLL------GFCLEGEEKILVYEFVPNKSLDYFLYAQSPKNNN 442
           V               +  +L  E+     L    Y    +N  
Sbjct: 75  VSAREVPDGLQKLAPNDLPLLAMEYCEGGDL--RKYLNQFENCC 116

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 56.7 bits (137), Expect = 5e-09
 Identities = 28/109 (25%), Positives = 50/109 (45%), Gaps = 10/109 (9%)

Query: 339 ETIEVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVA 397
           +T+E+          L EGGF  VY+   + SG+E A+KRL  +  +  +    EV  + 
Sbjct: 21  QTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMK 80

Query: 398 KLQ-HRNLVRLLGFCLEGEEK--------ILVYEFVPNKSLDYFLYAQS 437
           KL  H N+V+       G+E+        +L+ E    + +++    +S
Sbjct: 81  KLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMES 129

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 55.7 bits (135), Expect = 6e-09
 Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 5/84 (5%)

Query: 345 TNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRS--SGQGGQEFKNEVVLVAKLQH 401
              ++    LG+G FGEV K     + QE AVK ++++    +       EV L+ KL H
Sbjct: 21  AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH 80

Query: 402 RNLVRLLGFCLEGEEKI-LVYEFV 424
            N+++L     E      +V E  
Sbjct: 81  PNIMKLFEIL-EDSSSFYIVGELY 103

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 55.7 bits (135), Expect = 7e-09
 Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 4/83 (4%)

Query: 345 TNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQE-FKNEVVLVAKLQHR 402
            + F    KLG G FG+V+      SG E  +K +++   Q   E  + E+ ++  L H 
Sbjct: 21  DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHP 80

Query: 403 NLVRLLGFCLEGEEKI-LVYEFV 424
           N++++     E    + +V E  
Sbjct: 81  NIIKIFEVF-EDYHNMYIVMETC 102

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 56.2 bits (136), Expect = 9e-09
 Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 6/85 (7%)

Query: 345 TNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRS---SGQGGQEFKNEVVLVAKLQ 400
           ++ +     LG+G FGEV       +GQE AVK +S+         +    EV L+ +L 
Sbjct: 25  SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84

Query: 401 HRNLVRLLGFCLEGEEKI-LVYEFV 424
           H N+++L  F  E +    LV E  
Sbjct: 85  HPNIMKLYEFF-EDKGYFYLVGEVY 108

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 55.3 bits (134), Expect = 1e-08
 Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 3/83 (3%)

Query: 345 TNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRS--SGQGGQEFKNEVVLVAKLQH 401
           ++N+    +LG+G F  V + V   +G E A K ++    S +  Q+ + E  +  KLQH
Sbjct: 5   SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64

Query: 402 RNLVRLLGFCLEGEEKILVYEFV 424
            N+VRL     E     LV++ V
Sbjct: 65  PNIVRLHDSIQEESFHYLVFDLV 87

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 55.5 bits (134), Expect = 1e-08
 Identities = 23/94 (24%), Positives = 43/94 (45%), Gaps = 3/94 (3%)

Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVK--RLSRSSGQGGQEFKNEVVLVAKLQHR 402
             +    K+GEG FG+         G++  +K   +SR S +  +E + EV ++A ++H 
Sbjct: 24  EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHP 83

Query: 403 NLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQ 436
           N+V+      E     +V ++     L   + AQ
Sbjct: 84  NIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQ 117

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 55.4 bits (134), Expect = 1e-08
 Identities = 19/87 (21%), Positives = 37/87 (42%), Gaps = 7/87 (8%)

Query: 345 TNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGG------QEFKNEVVLVA 397
            + +    +LG G F  V K     +G E A K + +   +        +E + EV ++ 
Sbjct: 11  EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILR 70

Query: 398 KLQHRNLVRLLGFCLEGEEKILVYEFV 424
           ++ H N++ L        + +L+ E V
Sbjct: 71  QVLHPNIITLHDVYENRTDVVLILELV 97

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 55.4 bits (134), Expect = 1e-08
 Identities = 21/83 (25%), Positives = 39/83 (46%), Gaps = 6/83 (7%)

Query: 348 FSTDNKLGEGGFGEVYKGV-LPSGQEIAVK-----RLSRSSGQGGQEFKNEVVLVAKLQH 401
           +     +G+G F  V + +   +GQ+ AVK     + + S G   ++ K E  +   L+H
Sbjct: 26  YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85

Query: 402 RNLVRLLGFCLEGEEKILVYEFV 424
            ++V LL          +V+EF+
Sbjct: 86  PHIVELLETYSSDGMLYMVFEFM 108

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 54.5 bits (132), Expect = 2e-08
 Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 7/87 (8%)

Query: 345 TNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVK-----RLSRSSGQGGQE-FKNEVVLVA 397
            +++    +LG G F  V K     +G+E A K     RLS S     +E  + EV ++ 
Sbjct: 4   EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILR 63

Query: 398 KLQHRNLVRLLGFCLEGEEKILVYEFV 424
           +++H N++ L        + +L+ E V
Sbjct: 64  EIRHPNIITLHDIFENKTDVVLILELV 90

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 55.2 bits (133), Expect = 2e-08
 Identities = 26/114 (22%), Positives = 48/114 (42%), Gaps = 8/114 (7%)

Query: 323 NADNDITTLESLQFDFETIEVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVK----- 376
           +  +  +  E+L F   ++      +     +G+G +G V   +   +    A+K     
Sbjct: 3   HHHHHSSGRENLYFQGGSLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKN 62

Query: 377 RLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKI-LVYEFVPNKSL 429
           ++ + + +  +  K EV L+ KL H N+ RL     E E+ I LV E      L
Sbjct: 63  KIRQINPKDVERIKTEVRLMKKLHHPNIARLYE-VYEDEQYICLVMELCHGGHL 115

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score = 55.4 bits (134), Expect = 2e-08
 Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 12/96 (12%)

Query: 337 DFETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKN-EVVL 395
           D +T E     ++    +G G FG V++  L    E+A+K++ +      + FKN E+ +
Sbjct: 31  DGKTGEQREIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQ-----DKRFKNRELQI 85

Query: 396 VAKLQHRNLVRLLGFCLEGEEKI------LVYEFVP 425
           +  ++H N+V L  F     +K       LV E+VP
Sbjct: 86  MRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVP 121

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 54.5 bits (132), Expect = 2e-08
 Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 8/90 (8%)

Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRS----SGQGGQEFKNEVVLVAKLQ 400
            +F     LG+G FG VY      S   +A+K L ++    +G   Q  + EV + + L+
Sbjct: 9   EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ-LRREVEIQSHLR 67

Query: 401 HRNLVRLLGFCLEGEEKI-LVYEFVPNKSL 429
           H N++RL G+      ++ L+ E+ P  ++
Sbjct: 68  HPNILRLYGY-FHDATRVYLILEYAPLGTV 96

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 54.6 bits (132), Expect = 2e-08
 Identities = 19/87 (21%), Positives = 37/87 (42%), Gaps = 7/87 (8%)

Query: 345 TNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGG------QEFKNEVVLVA 397
            + +    +LG G F  V K     +G E A K + +   +        +E + EV ++ 
Sbjct: 11  EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILR 70

Query: 398 KLQHRNLVRLLGFCLEGEEKILVYEFV 424
           ++ H N++ L        + +L+ E V
Sbjct: 71  QVLHHNVITLHDVYENRTDVVLILELV 97

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 54.6 bits (132), Expect = 2e-08
 Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 7/87 (8%)

Query: 345 TNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVK-----RLSRSSGQGGQE-FKNEVVLVA 397
            + + T  +LG G F  V K     +G + A K     R   S     +E  + EV ++ 
Sbjct: 10  DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69

Query: 398 KLQHRNLVRLLGFCLEGEEKILVYEFV 424
           ++QH N++ L        + IL+ E V
Sbjct: 70  EIQHPNVITLHEVYENKTDVILILELV 96

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 54.5 bits (132), Expect = 2e-08
 Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 3/83 (3%)

Query: 345 TNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRN 403
              F     LG G F EV+      +G+  A+K + +S        +NE+ ++ K++H N
Sbjct: 8   RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHEN 67

Query: 404 LVRLLGFCLEGEEKI-LVYEFVP 425
           +V L     E      LV + V 
Sbjct: 68  IVTLEDIY-ESTTHYYLVMQLVS 89

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 54.6 bits (132), Expect = 2e-08
 Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 5/84 (5%)

Query: 345 TNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRS--SGQGGQEFKNEVVLVAKLQH 401
           ++N+    +LG+G F  V + V   +G E A K ++    S +  Q+ + E  +  KLQH
Sbjct: 28  SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 87

Query: 402 RNLVRLLGFCLEGEEKI-LVYEFV 424
            N+VRL     + E    LV++ V
Sbjct: 88  PNIVRLHDSI-QEESFHYLVFDLV 110

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 54.7 bits (132), Expect = 2e-08
 Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 4/80 (5%)

Query: 348 FSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLS---RSSGQGGQEFKNEVVLVAKLQHRN 403
           FS   ++G G FG VY    + + + +A+K++S   + S +  Q+   EV  + KL+H N
Sbjct: 56  FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115

Query: 404 LVRLLGFCLEGEEKILVYEF 423
            ++  G  L      LV E+
Sbjct: 116 TIQYRGCYLREHTAWLVMEY 135

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 55.0 bits (133), Expect = 2e-08
 Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 5/84 (5%)

Query: 345 TNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGG--QEFKNEVVLVAKLQH 401
           T  +    +LG+G F  V + V + +GQE A   ++         Q+ + E  +   L+H
Sbjct: 10  TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKH 69

Query: 402 RNLVRLLGFCLEGEEKI-LVYEFV 424
            N+VRL       E    L+++ V
Sbjct: 70  PNIVRLHDSI-SEEGHHYLIFDLV 92

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 53.9 bits (130), Expect = 3e-08
 Identities = 28/100 (28%), Positives = 40/100 (40%), Gaps = 16/100 (16%)

Query: 337 DFETIEVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRS-SGQGGQEFKNEVV 394
           DFE I+           LG GGFG V++          A+KR+         ++   EV 
Sbjct: 6   DFEPIQC----------LGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVK 55

Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLY 434
            +AKL+H  +VR     LE        E +   S   +LY
Sbjct: 56  ALAKLEHPGIVRYFNAWLEKNT----TEKLQPSSPKVYLY 91

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 54.2 bits (131), Expect = 3e-08
 Identities = 16/78 (20%), Positives = 42/78 (53%), Gaps = 2/78 (2%)

Query: 348 FSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGG-QEFKNEVVLVAKLQHRNLV 405
           F+   K+G+G FGEV+KG+   + + +A+K +     +   ++ + E+ ++++     + 
Sbjct: 24  FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83

Query: 406 RLLGFCLEGEEKILVYEF 423
           +  G  L+  +  ++ E+
Sbjct: 84  KYYGSYLKDTKLWIIMEY 101

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 53.8 bits (130), Expect = 3e-08
 Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 3/82 (3%)

Query: 345 TNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRN 403
              ++ +N +G G +GEV   V   +    A K++ +   +    FK E+ ++  L H N
Sbjct: 8   NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPN 67

Query: 404 LVRLLGFCLEGEEKI-LVYEFV 424
           ++RL     E    I LV E  
Sbjct: 68  IIRLYETF-EDNTDIYLVMELC 88

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 52.7 bits (127), Expect = 9e-08
 Identities = 28/83 (33%), Positives = 38/83 (45%), Gaps = 6/83 (7%)

Query: 347 NFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQE---FKNEVVLVAKL-QH 401
           +F   ++LG G +GEV+K      G+  AVKR S S  +G ++      EV    K+ QH
Sbjct: 58  SFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKR-SMSPFRGPKDRARKLAEVGSHEKVGQH 116

Query: 402 RNLVRLLGFCLEGEEKILVYEFV 424
              VRL     EG    L  E  
Sbjct: 117 PCCVRLEQAWEEGGILYLQTELC 139

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 52.8 bits (127), Expect = 1e-07
 Identities = 17/90 (18%), Positives = 39/90 (43%), Gaps = 10/90 (11%)

Query: 345 TNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQE--------FKNEVVL 395
            + +     LG G  GEV       + +++A++ +S+     G           + E+ +
Sbjct: 134 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEI 193

Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVP 425
           + KL H  ++++  F  + E+  +V E + 
Sbjct: 194 LKKLNHPCIIKIKNFF-DAEDYYIVLELME 222

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 52.8 bits (127), Expect = 1e-07
 Identities = 25/95 (26%), Positives = 39/95 (41%), Gaps = 16/95 (16%)

Query: 345 TNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGG-------------QEFK 390
             ++    KLG G +GEV          E A+K + +S    G             +E  
Sbjct: 35  GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIY 94

Query: 391 NEVVLVAKLQHRNLVRLLGFCLEGEEKI-LVYEFV 424
           NE+ L+  L H N+++L     E ++   LV EF 
Sbjct: 95  NEISLLKSLDHPNIIKLFDVF-EDKKYFYLVTEFY 128

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 52.3 bits (126), Expect = 1e-07
 Identities = 18/90 (20%), Positives = 39/90 (43%), Gaps = 10/90 (11%)

Query: 345 TNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQE--------FKNEVVL 395
            + +     LG G  GEV       + +++A+K +S+     G           + E+ +
Sbjct: 9   RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEI 68

Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVP 425
           + KL H  ++++  F  + E+  +V E + 
Sbjct: 69  LKKLNHPCIIKIKNFF-DAEDYYIVLELME 97

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 51.8 bits (125), Expect = 2e-07
 Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 3/82 (3%)

Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKN--EVVLVAKLQHR 402
             +    K+GEG +G V+K     +GQ +A+K+   S      +     E+ ++ +L+H 
Sbjct: 3   EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHP 62

Query: 403 NLVRLLGFCLEGEEKILVYEFV 424
           NLV LL          LV+E+ 
Sbjct: 63  NLVNLLEVFRRKRRLHLVFEYC 84

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 51.8 bits (125), Expect = 2e-07
 Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 3/82 (3%)

Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKN--EVVLVAKLQHR 402
             +     +GEG +G V K     +G+ +A+K+   S      +     E+ L+ +L+H 
Sbjct: 25  EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHE 84

Query: 403 NLVRLLGFCLEGEEKILVYEFV 424
           NLV LL  C + +   LV+EFV
Sbjct: 85  NLVNLLEVCKKKKRWYLVFEFV 106

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 51.5 bits (124), Expect = 2e-07
 Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 2/73 (2%)

Query: 354 LGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQ-HRNLVRLLGFC 411
           LGEG    V   + L + QE AVK + +  G        EV ++ + Q HRN++ L+ F 
Sbjct: 21  LGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFF 80

Query: 412 LEGEEKILVYEFV 424
            E +   LV+E +
Sbjct: 81  EEEDRFYLVFEKM 93

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 51.7 bits (124), Expect = 3e-07
 Identities = 18/69 (26%), Positives = 28/69 (40%), Gaps = 6/69 (8%)

Query: 346 NNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEV-VLVAKLQHRNL 404
           N   ++  LG G  G V       G+ +AVKR+             E+ +L     H N+
Sbjct: 15  NLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF---CDIALMEIKLLTESDDHPNV 71

Query: 405 VRLLGFCLE 413
           +R   +C E
Sbjct: 72  IRY--YCSE 78

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 51.7 bits (124), Expect = 3e-07
 Identities = 18/105 (17%), Positives = 38/105 (36%), Gaps = 6/105 (5%)

Query: 329 TTLESLQFDFETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQE 388
              +    +   + V   +F   + LG G  G +    +   +++AVKR+          
Sbjct: 7   LEQDDGDEETSVVIVGKISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFSF--- 63

Query: 389 FKNEVVLVAKL-QHRNLVRLLGFCLEGEEKI-LVYEFVPNKSLDY 431
              EV L+ +  +H N++R      +  +   +  E       +Y
Sbjct: 64  ADREVQLLRESDEHPNVIRYFCTE-KDRQFQYIAIELCAATLQEY 107

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 51.1 bits (123), Expect = 3e-07
 Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 8/90 (8%)

Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRS----SGQGGQEFKNEVVLVAKLQ 400
           ++F     LG+G FG VY      +   +A+K L +S     G   Q  + E+ + + L+
Sbjct: 14  DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQ-LRREIEIQSHLR 72

Query: 401 HRNLVRLLGFCLEGEEKI-LVYEFVPNKSL 429
           H N++R+  +     ++I L+ EF P   L
Sbjct: 73  HPNILRMYNY-FHDRKRIYLMLEFAPRGEL 101

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 51.2 bits (123), Expect = 3e-07
 Identities = 16/80 (20%), Positives = 34/80 (42%), Gaps = 2/80 (2%)

Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGG-QEFKNEVVLVAKLQHRN 403
           +++     +G G    V      P  +++A+KR++    Q    E   E+  +++  H N
Sbjct: 15  DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74

Query: 404 LVRLLGFCLEGEEKILVYEF 423
           +V      +  +E  LV + 
Sbjct: 75  IVSYYTSFVVKDELWLVMKL 94

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 50.8 bits (122), Expect = 4e-07
 Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 3/80 (3%)

Query: 345 TNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRN 403
              F    KLGEG +G VYK +   +GQ +A+K++   S    QE   E+ ++ +    +
Sbjct: 28  EEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDL--QEIIKEISIMQQCDSPH 85

Query: 404 LVRLLGFCLEGEEKILVYEF 423
           +V+  G   +  +  +V E+
Sbjct: 86  VVKYYGSYFKNTDLWIVMEY 105

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 50.9 bits (122), Expect = 4e-07
 Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 13/89 (14%)

Query: 345 TNNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSGQGGQEFKN-EVVLVAKLQHR 402
             +++    +G G FG VY+  L  SG+ +A+K++ +      + FKN E+ ++ KL H 
Sbjct: 53  EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHC 107

Query: 403 NLVRLLGFCLEGEEKI------LVYEFVP 425
           N+VRL  F     EK       LV ++VP
Sbjct: 108 NIVRLRYFFYSSGEKKDEVYLNLVLDYVP 136

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 50.5 bits (121), Expect = 5e-07
 Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 3/76 (3%)

Query: 336 FDFETIEVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVV 394
            D   +      F     +G G +G+VYKG  + +GQ  A+K +   +G   +E K E+ 
Sbjct: 14  IDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMD-VTGDEEEEIKQEIN 72

Query: 395 LVAKL-QHRNLVRLLG 409
           ++ K   HRN+    G
Sbjct: 73  MLKKYSHHRNIATYYG 88

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 50.3 bits (121), Expect = 6e-07
 Identities = 19/79 (24%), Positives = 33/79 (41%), Gaps = 4/79 (5%)

Query: 350 TDNKLGEGGFGEVYKGV-LPSGQEIAVK--RLSRSSGQGGQEFKNEVVLVAKLQHR-NLV 405
           T  +LG G F  V + +   +GQE A K  +  R       E  +E+ ++   +    ++
Sbjct: 33  TSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVI 92

Query: 406 RLLGFCLEGEEKILVYEFV 424
            L        E IL+ E+ 
Sbjct: 93  NLHEVYENTSEIILILEYA 111

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 50.3 bits (120), Expect = 6e-07
 Identities = 17/83 (20%), Positives = 31/83 (37%), Gaps = 5/83 (6%)

Query: 352 NKLGEG--GFGEVYKGV-LPSGQEIAVKR--LSRSSGQGGQEFKNEVVLVAKLQHRNLVR 406
             +G+G      V      P+G+ + V+R  L   S +     + E+ +     H N+V 
Sbjct: 31  TVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVP 90

Query: 407 LLGFCLEGEEKILVYEFVPNKSL 429
                +   E  +V  F+   S 
Sbjct: 91  YRATFIADNELWVVTSFMAYGSA 113

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 49.4 bits (119), Expect = 8e-07
 Identities = 21/82 (25%), Positives = 42/82 (51%), Gaps = 4/82 (4%)

Query: 346 NNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKN--EVVLVAKLQHRN 403
             +    K+GEG +G VYK     G+  A+K++       G       E+ ++ +L+H N
Sbjct: 2   EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61

Query: 404 LVRLLGFCLEGEEKI-LVYEFV 424
           +V+L    +  ++++ LV+E +
Sbjct: 62  IVKLYD-VIHTKKRLVLVFEHL 82

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 49.2 bits (118), Expect = 8e-07
 Identities = 19/100 (19%), Positives = 37/100 (37%), Gaps = 5/100 (5%)

Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVK--RLSRSSGQGGQEFKNEVVLVAKLQHR 402
            ++     +G G +G   K      G+ +  K       +    Q   +EV L+ +L+H 
Sbjct: 6   EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHP 65

Query: 403 NLVRLLGFCLEGEEKIL--VYEFVPNKSLDYFLYAQSPKN 440
           N+VR     ++     L  V E+     L   +   + + 
Sbjct: 66  NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKER 105

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 49.1 bits (118), Expect = 1e-06
 Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 2/81 (2%)

Query: 346 NNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKN--EVVLVAKLQHRN 403
             +    K+GEG +G VYK     G+ +A+KR+   +   G       E+ L+ +L H N
Sbjct: 21  EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80

Query: 404 LVRLLGFCLEGEEKILVYEFV 424
           +V L+          LV+EF+
Sbjct: 81  IVSLIDVIHSERCLTLVFEFM 101

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 49.5 bits (119), Expect = 1e-06
 Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 12/89 (13%)

Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRL---SRSSGQGGQEFKN----EVVLVA 397
             +   + LGEG F  VYK     + Q +A+K++    RS  + G         E+ L+ 
Sbjct: 10  KRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDG--INRTALREIKLLQ 67

Query: 398 KLQHRNLVRLLGFCLEGEEKI-LVYEFVP 425
           +L H N++ LL      +  I LV++F+ 
Sbjct: 68  ELSHPNIIGLLD-AFGHKSNISLVFDFME 95

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 49.3 bits (117), Expect = 1e-06
 Identities = 8/69 (11%), Positives = 17/69 (24%), Gaps = 4/69 (5%)

Query: 347 NFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQE---FKNEVVLVAKLQHR 402
                  L  G    V+    +   ++ A+K  +  +     E           A+L   
Sbjct: 63  KLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGE 122

Query: 403 NLVRLLGFC 411
           +        
Sbjct: 123 SPEEARDRR 131

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 48.6 bits (116), Expect = 2e-06
 Identities = 11/83 (13%), Positives = 31/83 (37%), Gaps = 8/83 (9%)

Query: 353 KLGEGGFGEVYKG---VLPSGQEIAVKRLSRSSGQGG---QEFKNEVVLVAKLQHRNLVR 406
             G     + ++     L   +++A+  +           QE  +  + ++++    + R
Sbjct: 38  FHGGVPPLQFWQALDTAL--DRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVAR 95

Query: 407 LLGFCLEGEEKILVYEFVPNKSL 429
           +L         ++V E++   SL
Sbjct: 96  VLDVVHTRAGGLVVAEWIRGGSL 118

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 49.5 bits (118), Expect = 2e-06
 Identities = 20/89 (22%), Positives = 37/89 (41%), Gaps = 16/89 (17%)

Query: 353 KLGEGGFGEVYKG---VLPSGQEIAVKRLSRSSGQGGQE-FKNEVVLVAKLQHRNLVRLL 408
            +  GG G +Y      + +G+ + +K L  S     Q     E   +A++ H ++V++ 
Sbjct: 87  CIAHGGLGWIYLALDRNV-NGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIF 145

Query: 409 GFCLEGEEKI--------LVYEFVPNKSL 429
            F    E           +V E+V  +SL
Sbjct: 146 NF---VEHTDRHGDPVGYIVMEYVGGQSL 171

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 48.5 bits (116), Expect = 2e-06
 Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 11/81 (13%)

Query: 354 LGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKN------EVVLVAKLQHR--NL 404
           LG GGFG VY G+ +     +A+K + +       E  N      EVVL+ K+      +
Sbjct: 51  LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 110

Query: 405 VRLLGFCLEGEEKI-LVYEFV 424
           +RLL +  E  +   L+ E  
Sbjct: 111 IRLLDW-FERPDSFVLILERP 130

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 48.5 bits (116), Expect = 2e-06
 Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 3/81 (3%)

Query: 345 TNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRN 403
           ++ F  +++LG G    VY+     + +  A+K L ++  +  +  + E+ ++ +L H N
Sbjct: 52  SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDK--KIVRTEIGVLLRLSHPN 109

Query: 404 LVRLLGFCLEGEEKILVYEFV 424
           +++L        E  LV E V
Sbjct: 110 IIKLKEIFETPTEISLVLELV 130

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... Length = 299

 Score = 47.9 bits (115), Expect = 3e-06
 Identities = 28/83 (33%), Positives = 46/83 (55%), Gaps = 5/83 (6%)

Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKN--EVVLVAKLQHR 402
            NF    K+GEG +G VYK     +G+ +A+K++   +   G       E+ L+ +L H 
Sbjct: 3   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62

Query: 403 NLVRLLGFCLEGEEKI-LVYEFV 424
           N+V+LL   +  E K+ LV+EF+
Sbjct: 63  NIVKLLD-VIHTENKLYLVFEFL 84

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 47.6 bits (114), Expect = 3e-06
 Identities = 22/88 (25%), Positives = 43/88 (48%), Gaps = 7/88 (7%)

Query: 354 LGEGGFGEVYKGV-LPSGQEIAVKRLSRSS----GQGGQEFKNEVVLVAKLQHRNLVRLL 408
           LGEG +G+V + +   +    AVK L +        G    K E+ L+ +L+H+N+++L+
Sbjct: 13  LGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLV 72

Query: 409 G-FCLEGEEKI-LVYEFVPNKSLDYFLY 434
                E ++K+ +V E+      +    
Sbjct: 73  DVLYNEEKQKMYMVMEYCVCGMQEMLDS 100

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 48.0 bits (114), Expect = 3e-06
 Identities = 26/110 (23%), Positives = 40/110 (36%), Gaps = 12/110 (10%)

Query: 337 DFETIEVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQE-FKNEVV 394
           DFE I+           +G GGFG V++          A+KR+   + +  +E    EV 
Sbjct: 7   DFEPIQC----------MGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVK 56

Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPKNNNNW 444
            +AKL+H  +VR     LE   +    E       D          +   
Sbjct: 57  ALAKLEHPGIVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMD 106

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 47.5 bits (114), Expect = 4e-06
 Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 5/83 (6%)

Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKN--EVVLVAKLQHR 402
             +    K+GEG +G V+K     + + +A+KR+       G       E+ L+ +L+H+
Sbjct: 2   QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61

Query: 403 NLVRLLGFCLEGEEKI-LVYEFV 424
           N+VRL    L  ++K+ LV+EF 
Sbjct: 62  NIVRLHD-VLHSDKKLTLVFEFC 83

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 47.3 bits (113), Expect = 5e-06
 Identities = 22/83 (26%), Positives = 45/83 (54%), Gaps = 6/83 (7%)

Query: 354 LGEGGFGEVYKGV-LPSGQEIAVKRLSRS--SGQGGQEFKNEVVLVAKLQHRNLVRLLGF 410
           +G+G F +V     + +G+E+A+K + ++  +    Q+   EV ++  L H N+V+L   
Sbjct: 23  IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFE- 81

Query: 411 CLEGEEKI-LVYEFVPNKSL-DY 431
            +E E+ + L+ E+     + DY
Sbjct: 82  VIETEKTLYLIMEYASGGEVFDY 104

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 47.2 bits (113), Expect = 6e-06
 Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 14/95 (14%)

Query: 344 ATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKN-----EVVLVA 397
           AT+ +    ++G G +G VYK     SG  +A+K +   +G GG          EV L+ 
Sbjct: 7   ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66

Query: 398 KLQ---HRNLVRLL----GFCLEGEEKI-LVYEFV 424
           +L+   H N+VRL+        + E K+ LV+E V
Sbjct: 67  RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV 101

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 46.8 bits (112), Expect = 6e-06
 Identities = 23/82 (28%), Positives = 33/82 (40%), Gaps = 5/82 (6%)

Query: 354 LGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQE-FKNEVVLVAKLQHRNLVRLLGFC 411
           LGEG +GEV   V   + + +AVK +         E  K E+ +   L H N+V+  G  
Sbjct: 15  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-H 73

Query: 412 LEGEEKI-LVYEFVPNKSL-DY 431
                   L  E+     L D 
Sbjct: 74  RREGNIQYLFLEYCSGGELFDR 95

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score = 47.1 bits (112), Expect = 6e-06
 Identities = 19/81 (23%), Positives = 38/81 (46%), Gaps = 15/81 (18%)

Query: 353 KLGEGGFGEVYKGV---LPSGQEIAVKRLSR----SSGQGGQEFKNEVVLVAKLQHRNLV 405
           K+G G +G VYK         ++ A+K++       S         E+ L+ +L+H N++
Sbjct: 28  KVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACR------EIALLRELKHPNVI 81

Query: 406 RLLGFCLE-GEEKI-LVYEFV 424
            L    L   + K+ L++++ 
Sbjct: 82  SLQKVFLSHADRKVWLLFDYA 102

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 46.8 bits (112), Expect = 6e-06
 Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 8/86 (9%)

Query: 344 ATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKN----EVVLVAK 398
           +++ F    KLG G +  VYKG+   +G  +A+K +   S +G     +    E+ L+ +
Sbjct: 3   SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEG---TPSTAIREISLMKE 59

Query: 399 LQHRNLVRLLGFCLEGEEKILVYEFV 424
           L+H N+VRL        +  LV+EF+
Sbjct: 60  LKHENIVRLYDVIHTENKLTLVFEFM 85

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 46.6 bits (111), Expect = 8e-06
 Identities = 17/122 (13%), Positives = 50/122 (40%), Gaps = 20/122 (16%)

Query: 323 NADNDITTLESLQFDFETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSS 382
           +  ++ + L  L    +  +   N++     L +G F ++        +  A+K+  +S 
Sbjct: 8   DILSNYSNLIYLNKYVKEKDKYINDYRIIRTLNQGKFNKIILCE-KDNKFYALKKYEKSL 66

Query: 383 GQGGQEF-----------------KNEVVLVAKLQHRNLVRLLGFCLEGEEKI-LVYEFV 424
            +  ++F                 KNE+ ++  +++   +   G  +   +++ ++YE++
Sbjct: 67  LEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGI-ITNYDEVYIIYEYM 125

Query: 425 PN 426
            N
Sbjct: 126 EN 127

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 46.6 bits (111), Expect = 8e-06
 Identities = 20/87 (22%), Positives = 40/87 (45%), Gaps = 11/87 (12%)

Query: 347 NFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRS--------SGQGGQEFKNEVVLVA 397
            +ST + LG G FG V+  V     +E+ VK + +               +   E+ +++
Sbjct: 25  KYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILS 84

Query: 398 KLQHRNLVRLLGFCLEGEEKI-LVYEF 423
           +++H N++++L    E +    LV E 
Sbjct: 85  RVEHANIIKVLDI-FENQGFFQLVMEK 110

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 46.5 bits (111), Expect = 9e-06
 Identities = 23/82 (28%), Positives = 33/82 (40%), Gaps = 5/82 (6%)

Query: 354 LGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQE-FKNEVVLVAKLQHRNLVRLLGFC 411
           LGEG +GEV   V   + + +AVK +         E  K E+ +   L H N+V+  G  
Sbjct: 15  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-H 73

Query: 412 LEGEEKI-LVYEFVPNKSL-DY 431
                   L  E+     L D 
Sbjct: 74  RREGNIQYLFLEYCSGGELFDR 95

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 46.1 bits (110), Expect = 1e-05
 Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 7/84 (8%)

Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKN----EVVLVAKLQ 400
           + +    KLGEG +GEVYK +   + + +A+KR+     + G         EV L+ +LQ
Sbjct: 34  DRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEG--VPGTAIREVSLLKELQ 91

Query: 401 HRNLVRLLGFCLEGEEKILVYEFV 424
           HRN++ L           L++E+ 
Sbjct: 92  HRNIIELKSVIHHNHRLHLIFEYA 115

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 45.7 bits (109), Expect = 2e-05
 Identities = 17/81 (20%), Positives = 35/81 (43%), Gaps = 4/81 (4%)

Query: 345 TNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRN 403
           T+ +     +G G +    + +   +  E AVK + +S     +E     +L+   QH N
Sbjct: 21  TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEE---IEILLRYGQHPN 77

Query: 404 LVRLLGFCLEGEEKILVYEFV 424
           ++ L     +G+   +V E +
Sbjct: 78  IITLKDVYDDGKYVYVVTELM 98

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 45.9 bits (109), Expect = 2e-05
 Identities = 21/126 (16%), Positives = 45/126 (35%), Gaps = 12/126 (9%)

Query: 311 KAKNKYNAVPEVNADNDITTLESLQFDFETIEVATNNFSTDNKLGEGGFGEVYKGV-LPS 369
           K  N        N        E    D+   +     +   + +G G    V + V   +
Sbjct: 59  KKLNDAQPKGTENLYFQSMGPEDELPDWAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRAT 118

Query: 370 GQEIAVKRLSRSSGQGGQE--------FKNEVVLVAKL-QHRNLVRLLGFCLEGEEKI-L 419
           G E AVK +  ++ +   E         + E  ++ ++  H +++ L+    E    + L
Sbjct: 119 GHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSY-ESSSFMFL 177

Query: 420 VYEFVP 425
           V++ + 
Sbjct: 178 VFDLMR 183

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 45.4 bits (108), Expect = 2e-05
 Identities = 18/86 (20%), Positives = 32/86 (37%), Gaps = 12/86 (13%)

Query: 332 ESLQFDFETIEVATNNFS-----TDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQG 385
             L+  F+  E      +     +   LG G  G+V +     +GQ+ A+K L  S    
Sbjct: 10  SGLEVLFQGPEPKKYAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS---- 65

Query: 386 GQEFKNEV-VLVAKLQHRNLVRLLGF 410
             + + EV          ++V +L  
Sbjct: 66  -PKARQEVDHHWQASGGPHIVCILDV 90

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 45.4 bits (108), Expect = 2e-05
 Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 13/82 (15%)

Query: 354 LGEGGFGEVYKGV-LPSGQEIAVKRLSRS------SGQGGQEFKNEVVLVAKL----QHR 402
           LG+GGFG V+ G  L    ++A+K + R+                EV L+ K+     H 
Sbjct: 39  LGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHP 98

Query: 403 NLVRLLGFCLEGEEKI-LVYEF 423
            ++RLL +  E +E   LV E 
Sbjct: 99  GVIRLLDW-FETQEGFMLVLER 119

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 45.4 bits (108), Expect = 2e-05
 Identities = 18/97 (18%), Positives = 38/97 (39%), Gaps = 16/97 (16%)

Query: 339 ETIEVATNNFSTD-----NKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNE 392
             +++  N    D       LG G  G+V +     + ++ A+K L         + + E
Sbjct: 6   SGLQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARRE 60

Query: 393 V-VLVAKLQHRNLVRLLGFC---LEGEEKI-LVYEFV 424
           V +     Q  ++VR++        G + + +V E +
Sbjct: 61  VELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECL 97

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 45.3 bits (108), Expect = 2e-05
 Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 10/85 (11%)

Query: 346 NNFSTDNKLGEGGFGEVYKG-VLPSGQEIAVKRLSRSSGQGGQEFKN----EVVLVAKLQ 400
             +   +KLGEG +  VYKG    +   +A+K +     +G          EV L+  L+
Sbjct: 2   ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEG---APCTAIREVSLLKDLK 58

Query: 401 HRNLVRLLGFCLEGEEKI-LVYEFV 424
           H N+V L    +  E+ + LV+E++
Sbjct: 59  HANIVTLHD-IIHTEKSLTLVFEYL 82

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 44.6 bits (106), Expect = 3e-05
 Identities = 19/92 (20%), Positives = 36/92 (39%), Gaps = 11/92 (11%)

Query: 345 TNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGG---------QEFKNEVV 394
             N+     LG G    V + +  P+ +E AVK +  + G            +    EV 
Sbjct: 16  YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVD 75

Query: 395 LVAKL-QHRNLVRLLGFCLEGEEKILVYEFVP 425
           ++ K+  H N+++L           LV++ + 
Sbjct: 76  ILRKVSGHPNIIQLKDTYETNTFFFLVFDLMK 107

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 44.7 bits (106), Expect = 4e-05
 Identities = 26/161 (16%), Positives = 48/161 (29%), Gaps = 41/161 (25%)

Query: 252 FYNLSATSPPPPAPVLLPPPPPGSARGKSGISSSTIIAIVAPIAVTAVLFIVGLCYFIRK 311
             N    SPP P P   PPP P +       +                            
Sbjct: 2   LSNSQGQSPPVPFPAPAPPPQPPTPALPHPPAQP-------------------------- 35

Query: 312 AKNKYNAVPEVNADNDITTLESLQFDFETIEVATNNFSTDNKLGEGGFGEVYKGV-LPSG 370
                   P+ +  + +   ++   D   +        T   LG G  G+V +     + 
Sbjct: 36  PPPPPQQFPQFHVKSGLQIKKNAIIDDYKV--------TSQVLGLGINGKVLQIFNKRTQ 87

Query: 371 QEIAVKRLSRSSGQGGQEFKNEV-VLVAKLQHRNLVRLLGF 410
           ++ A+K L         + + EV +     Q  ++VR++  
Sbjct: 88  EKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDV 123

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 44.1 bits (105), Expect = 4e-05
 Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 7/84 (8%)

Query: 354 LGEGGFGEVYKGV-LPSGQEIAVKRLSRS---SGQGGQEFKNEVVLVAKLQHRNLVRLLG 409
           LG G FG+V  G    +G ++AVK L+R    S     + K E+  +   +H ++++L  
Sbjct: 19  LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78

Query: 410 FCLEGEEKI-LVYEFVPNKSL-DY 431
             +       +V E+V    L DY
Sbjct: 79  -VISTPTDFFMVMEYVSGGELFDY 101

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 44.4 bits (105), Expect = 5e-05
 Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 7/84 (8%)

Query: 354 LGEGGFGEVYKGV-LPSGQEIAVKRLSRS---SGQGGQEFKNEVVLVAKLQHRNLVRLLG 409
           LG G FG+V  G    +G ++AVK L+R    S     + + E+  +   +H ++++L  
Sbjct: 24  LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQ 83

Query: 410 FCLEGEEKI-LVYEFVPNKSL-DY 431
             +     I +V E+V    L DY
Sbjct: 84  V-ISTPSDIFMVMEYVSGGELFDY 106

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 44.3 bits (105), Expect = 6e-05
 Identities = 19/69 (27%), Positives = 37/69 (53%), Gaps = 7/69 (10%)

Query: 342 EVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKN-EVVLVAKL 399
           E ++  +S    LG G FG V +   + SG+  A+K++ +        +KN E+ ++  L
Sbjct: 3   ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQD-----PRYKNRELDIMKVL 57

Query: 400 QHRNLVRLL 408
            H N+++L+
Sbjct: 58  DHVNIIKLV 66

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A Length = 296

 Score = 43.5 bits (103), Expect = 6e-05
 Identities = 22/90 (24%), Positives = 41/90 (45%), Gaps = 6/90 (6%)

Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH-RN 403
           N +    K+G G FG++Y G  + +G+E+A+K     +     +   E  +   +Q    
Sbjct: 9   NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH--PQLHIESKIYKMMQGGVG 66

Query: 404 LVRLLGFCLEGEEKILVYEFVPNKSL-DYF 432
           +  +     EG+  ++V E +   SL D F
Sbjct: 67  IPTIRWCGAEGDYNVMVMELL-GPSLEDLF 95

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 43.5 bits (103), Expect = 7e-05
 Identities = 25/108 (23%), Positives = 46/108 (42%), Gaps = 9/108 (8%)

Query: 332 ESLQFDFE-TIEVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEF 389
             L+   E   +    +     ++G G +G V K V  PSGQ +AVKR+  +  +  +E 
Sbjct: 7   GKLKISPEQHWDFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDE--KEQ 64

Query: 390 K---NEV-VLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL 433
           K    ++ V++       +V+  G      +  +  E + + S D F 
Sbjct: 65  KQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELM-STSFDKFY 111

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 43.0 bits (102), Expect = 1e-04
 Identities = 22/79 (27%), Positives = 32/79 (40%), Gaps = 7/79 (8%)

Query: 349 STDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQ-HRNLVR 406
             D  LGEG F    K V   S Q  AVK +S+         + E+  +   + H N+V+
Sbjct: 14  LKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKRM---EANTQKEITALKLCEGHPNIVK 70

Query: 407 LLGFCLEGEEKI-LVYEFV 424
           L       +    LV E +
Sbjct: 71  LHEVF-HDQLHTFLVMELL 88

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 42.9 bits (101), Expect = 1e-04
 Identities = 26/105 (24%), Positives = 43/105 (40%), Gaps = 4/105 (3%)

Query: 332 ESLQFDFETIEVATNNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSGQGGQEF- 389
             L    +  E+  ++F   ++LG G  G V+K    PSG  +A K +        +   
Sbjct: 19  AFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQI 78

Query: 390 KNEVVLVAKLQHRNLVRLLG-FCLEGEEKILVYEFVPNKSLDYFL 433
             E+ ++ +     +V   G F  +GE  I   E +   SLD  L
Sbjct: 79  IRELQVLHECNSPYIVGFYGAFYSDGEISI-CMEHMDGGSLDQVL 122

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 42.6 bits (101), Expect = 2e-04
 Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 15/92 (16%)

Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKN----EVVLVAKLQ 400
           + +    K+G+G FGEV+K     +GQ++A+K++   + + G  F      E+ ++  L+
Sbjct: 17  SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEG--FPITALREIKILQLLK 74

Query: 401 HRNLVRLLGFCLEGEEKI--------LVYEFV 424
           H N+V L+  C               LV++F 
Sbjct: 75  HENVVNLIEICRTKASPYNRCKGSIYLVFDFC 106

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} Length = 483

 Score = 43.1 bits (101), Expect = 2e-04
 Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 4/79 (5%)

Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNL 404
           N F    K+G G FGE+Y G  + + +E+A+K  +  +     +   E  +   LQ    
Sbjct: 7   NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH--PQLLYESKIYRILQGGTG 64

Query: 405 V-RLLGFCLEGEEKILVYE 422
           +  +  F +EG+  +LV +
Sbjct: 65  IPNVRWFGVEGDYNVLVMD 83

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score = 42.7 bits (101), Expect = 2e-04
 Identities = 24/100 (24%), Positives = 42/100 (42%), Gaps = 17/100 (17%)

Query: 338 FETIEVATNNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSGQGGQEFKN----E 392
            E      + F  +   G+G FG V  G    +G  +A+K++ +        F+N     
Sbjct: 15  DERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQD-----PRFRNRELQI 69

Query: 393 VVLVAKLQHRNLVRLLGFCLEGEEK-------ILVYEFVP 425
           +  +A L H N+V+L  +     E+        +V E+VP
Sbjct: 70  MQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVP 109

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336

 Score = 42.6 bits (99), Expect = 2e-04
 Identities = 17/124 (13%), Positives = 38/124 (30%), Gaps = 22/124 (17%)

Query: 343 VATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQ--------EFKNEVV 394
           + T       K+GEG FGEV++ +      +A+K ++                E   E++
Sbjct: 17  LPTEKLQRCEKIGEGVFGEVFQTIAD-HTPVAIKIIAIEGPDLVNGSHQKTFEEILPEII 75

Query: 395 LVAKLQ---------HRNLVRLLGFCL----EGEEKILVYEFVPNKSLDYFLYAQSPKNN 441
           +  +L              + L              +  ++   +            K++
Sbjct: 76  ISKELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDD 135

Query: 442 NNWI 445
             +I
Sbjct: 136 QLFI 139

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 41.9 bits (99), Expect = 2e-04
 Identities = 26/99 (26%), Positives = 45/99 (45%), Gaps = 8/99 (8%)

Query: 340 TIEVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFK---NEV-V 394
           ++EV  ++     +LG G +G V K   +PSGQ +AVKR+  +     QE K    ++ +
Sbjct: 1   SMEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNS--QEQKRLLMDLDI 58

Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL 433
            +  +     V   G      +  +  E + + SLD F 
Sbjct: 59  SMRTVDCPFTVTFYGALFREGDVWICMELM-DTSLDKFY 96

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 41.8 bits (99), Expect = 3e-04
 Identities = 24/93 (25%), Positives = 45/93 (48%), Gaps = 10/93 (10%)

Query: 353 KLGEGGFGEVYKG---VLPSGQEIAVKRLSRSSGQGGQE----FKNEVVLVAKLQHRNLV 405
           KLG GG   VY     +L    ++A+K +     +  +E    F+ EV   ++L H+N+V
Sbjct: 18  KLGGGGMSTVYLAEDTIL--NIKVAIKAI-FIPPREKEETLKRFEREVHNSSQLSHQNIV 74

Query: 406 RLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSP 438
            ++    E +   LV E++   +L  ++ +  P
Sbjct: 75  SMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGP 107

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 42.0 bits (99), Expect = 3e-04
 Identities = 16/81 (19%), Positives = 33/81 (40%), Gaps = 5/81 (6%)

Query: 354 LGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCL 412
           +G G FG         + + +AVK + R +       + E++    L+H N+VR     +
Sbjct: 28  IGSGNFGVARLMRDKLTKELVAVKYIERGAAIDEN-VQREIINHRSLRHPNIVRFKE-VI 85

Query: 413 EGEEKI-LVYEFVPNKSL-DY 431
                + ++ E+     L + 
Sbjct: 86  LTPTHLAIIMEYASGGELYER 106

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 41.5 bits (98), Expect = 3e-04
 Identities = 20/94 (21%), Positives = 35/94 (37%), Gaps = 12/94 (12%)

Query: 353 KLGEGGFGEVYKGVLPS-GQEIAVKRLSRSSGQGGQE----FKNEVVLVAKLQHRNLVRL 407
            +G GG G+VY+       + +A+K +   +           + E     +LQ  ++V +
Sbjct: 41  LVGRGGMGDVYEAEDTVRERIVALKLM-SETLSSDPVFRTRMQREARTAGRLQEPHVVPI 99

Query: 408 LGFCLEGEEKILVY---EFVPNKSLDYFLYAQSP 438
             F   GE    +Y     +    L   L  Q P
Sbjct: 100 HDF---GEIDGQLYVDMRLINGVDLAAMLRRQGP 130

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 41.9 bits (99), Expect = 3e-04
 Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 6/76 (7%)

Query: 354 LGEGGFGEVYKGV-LPSGQEIAVKRLSRS---SGQGGQEFKNEVVLVAKLQHRNLVRLLG 409
           LGEG FG+V       + Q++A+K +SR            + E+  +  L+H ++++L  
Sbjct: 17  LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYD 76

Query: 410 FCLEGEEKI-LVYEFV 424
             +     I +V E+ 
Sbjct: 77  V-ITTPTDIVMVIEYA 91

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 41.4 bits (98), Expect = 3e-04
 Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 16/93 (17%)

Query: 346 NNFSTDNKLGEGGFGEVYKG--VLPSGQEIAVKRLSRSSGQGGQEFKN----EVVLVAKL 399
             +    ++GEG +G+V+K   +   G+ +A+KR+   +G+ G         EV ++  L
Sbjct: 11  QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEG--MPLSTIREVAVLRHL 68

Query: 400 Q---HRNLVRLL----GFCLEGEEKI-LVYEFV 424
           +   H N+VRL         + E K+ LV+E V
Sbjct: 69  ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV 101

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score = 41.1 bits (97), Expect = 5e-04
 Identities = 15/89 (16%), Positives = 31/89 (34%), Gaps = 17/89 (19%)

Query: 337 DFETIEVATNNFSTDNK------LGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQE-- 388
           +    ++     +  +       +  G +G V  GV   G  +A+KR+  +   G     
Sbjct: 7   EAAMRDLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNI 66

Query: 389 FKN---------EVVLVAKLQHRNLVRLL 408
             +         E+ L+    H N++ L 
Sbjct: 67  LSDSFLCKRVLREIRLLNHFHHPNILGLR 95

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A Length = 364

 Score = 40.9 bits (96), Expect = 6e-04
 Identities = 12/51 (23%), Positives = 20/51 (39%), Gaps = 6/51 (11%)

Query: 346 NNFSTDNKLGEGGFGEVYKGVLPSGQEI------AVKRLSRSSGQGGQEFK 390
             +     +G+GGFG +Y   + S + +       VK     +G    E K
Sbjct: 35  AAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELK 85

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.4 bits (96), Expect = 6e-04
 Identities = 59/464 (12%), Positives = 116/464 (25%), Gaps = 149/464 (32%)

Query: 83  GQDPNKVYGLFLCRGDQTASSCQDCVTFATRDLVQRCPDGKQTIIWYDQCLLRYSNRSIF 142
               +    LF     +     Q  V     ++++   +       Y   +         
Sbjct: 58  KDAVSGTLRLFWTLLSKQEEMVQKFV----EEVLR--IN-------YKFLMSPIKTEQRQ 104

Query: 143 STMDTVPYVS----LLNT------QNVTDRGRFNQI---LASL----------M-----S 174
            +M T  Y+     L N        NV+    + ++   L  L          +     +
Sbjct: 105 PSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKT 164

Query: 175 QVVNQAVNNSR---KFA------------TRTANFTALQTLYSLAQCTPDLSS---SDCN 216
            V      + +   K              +       LQ L    Q  P+ +S      N
Sbjct: 165 WVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLY--QIDPNWTSRSDHSSN 222

Query: 217 V-----CLQAAIAEL------PNC-------CSGKT------GAQVLIPSCIVRYEFYPF 252
           +      +QA +  L       NC        + K         ++L+ +   R++    
Sbjct: 223 IKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTT---RFK---- 275

Query: 253 YNLSATSPPPPAPVLLPPPPPGSARGKS--------GISSSTI---IAIVAPIAVTAVLF 301
                 S      + L          +               +   +    P  ++    
Sbjct: 276 QVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLS---- 331

Query: 302 IVGLCYFIRKAKNKYNAVPEVNADNDITTLESLQFDFETIEVATNNFSTDNKLGEGGFGE 361
           I+     IR     ++    VN D     L         IE + N            + +
Sbjct: 332 IIAE--SIRDGLATWDNWKHVNCDK----LT------TIIESSLNVLEPAE------YRK 373

Query: 362 VYK--GVLPSGQEIAVKRLSR----SSGQGGQEFKNEVV---LVAKLQHRNLVRL----L 408
           ++    V P    I    LS               N++    LV K    + + +    L
Sbjct: 374 MFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYL 433

Query: 409 GFCLEGEE-----KILV--YEFVPNKSLDYFLYAQSPKNNNNWI 445
              ++ E      + +V  Y    N    +      P   + + 
Sbjct: 434 ELKVKLENEYALHRSIVDHY----NIPKTFDSDDLIPPYLDQYF 473

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 40.8 bits (96), Expect = 6e-04
 Identities = 20/88 (22%), Positives = 39/88 (44%), Gaps = 8/88 (9%)

Query: 334 LQFDFETIEVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKN- 391
           L    +  +   N+     ++G G  G+V+K     +G  IAVK++ RS  +  +E K  
Sbjct: 13  LTIGGQRYQAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNK--EENKRI 70

Query: 392 --EV-VLVAKLQHRNLVRLLG-FCLEGE 415
             ++ V++       +V+  G F    +
Sbjct: 71  LMDLDVVLKSHDCPYIVQCFGTFITNTD 98

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* Length = 330

 Score = 40.4 bits (95), Expect = 7e-04
 Identities = 23/90 (25%), Positives = 37/90 (41%), Gaps = 6/90 (6%)

Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH-RN 403
            NF    K+G G FGE+  G  L + + +A+K     S     +   E     +L     
Sbjct: 9   PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRA--PQLHLEYRFYKQLGSGDG 66

Query: 404 LVRLLGFCLEGEEKILVYEFVPNKSL-DYF 432
           + ++  F   G+   +V E +   SL D F
Sbjct: 67  IPQVYYFGPCGKYNAMVLELL-GPSLEDLF 95

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* Length = 298

 Score = 40.4 bits (95), Expect = 8e-04
 Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 4/79 (5%)

Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH-RN 403
            ++    ++GEG FG +++G  L + Q++A+K   R S     + ++E      L     
Sbjct: 10  VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDA--PQLRDEYRTYKLLAGCTG 67

Query: 404 LVRLLGFCLEGEEKILVYE 422
           +  +  F  EG   +LV +
Sbjct: 68  IPNVYYFGQEGLHNVLVID 86

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 40.4 bits (94), Expect = 9e-04
 Identities = 8/52 (15%), Positives = 18/52 (34%), Gaps = 4/52 (7%)

Query: 354 LGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGG---QEFKNEVVLVAKLQH 401
           LG+       +     +G+   V     +        ++ K EV+ +  L+ 
Sbjct: 86  LGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRG 137

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	451
3a2e_A	108	Ginkbilobin-2; domain 26 unknown function (DUF26),	99.95
2e79_A	108	Ginkbilobin-2; DUF26 fold, C-X8-C-X2-C motif, lect	99.95
3a2e_A	108	Ginkbilobin-2; domain 26 unknown function (DUF26),	99.88
2e79_A	108	Ginkbilobin-2; DUF26 fold, C-X8-C-X2-C motif, lect	99.87
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.75
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.75
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.73
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.66
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.62
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.61
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.61
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.58
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.57
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.56
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.56
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.55
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.5
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.49
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.45
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.43
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.43
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.42
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.42
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.39
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.38
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.37
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.37
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.34
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.33
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.32
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.31
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.31
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.3
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.3
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.3
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.29
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.29
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.29
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.29
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.29
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.29
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.28
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.28
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.28
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.27
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.27
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.27
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.27
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.27
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.27
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.27
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.27
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.26
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.26
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.26
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.26
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.25
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.25
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.25
3uqc_A	286	Probable conserved transmembrane protein; structur	99.25
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.25
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.24
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.24
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.23
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.23
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.23
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.23
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.23
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.23
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.23
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.23
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.22
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.22
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.22
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.22
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.22
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.22
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.22
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.22
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.22
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.22
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.22
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.22
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.22
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.21
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.21
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.21
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.21
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.2
3bhy_A	283	Death-associated protein kinase 3; death associate	99.2
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.2
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.2
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.2
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.2
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.2
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.2
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.2
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.19
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.19
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.19
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.19
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.19
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.18
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.18
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.18
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.17
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.17
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.17
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.17
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.17
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.17
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.17
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.17
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.17
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.16
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.16
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.16
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.16
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.16
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.16
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.16
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.15
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.15
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.15
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.15
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.15
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.15
3niz_A	311	Rhodanese family protein; structural genomics, str	99.15
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.15
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.15
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.15
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.15
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.14
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.14
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.14
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.14
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.14
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.14
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.14
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.13
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.13
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.13
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.13
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.13
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.13
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.13
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.13
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.13
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.12
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.12
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.12
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.12
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.12
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.12
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.12
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.12
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.11
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.11
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.11
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.11
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.11
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.1
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.1
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.1
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.1
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.1
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.09
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.09
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.09
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.09
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.09
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.08
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.08
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.08
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.07
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.07
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.07
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.07
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.07
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.07
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.07
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.06
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.06
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.06
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.05
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.05
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.05
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.04
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.04
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.04
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.03
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.03
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.03
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.03
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.03
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.03
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.01
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.01
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.01
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.01
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.0
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.0
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.0
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.0
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	98.99
3rp9_A	458	Mitogen-activated protein kinase; structural genom	98.99
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	98.99
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	98.98
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	98.97
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	98.97
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	98.96
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	98.96
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	98.95
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	98.95
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	98.95
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	98.95
3aln_A	327	Dual specificity mitogen-activated protein kinase;	98.95
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	98.94
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	98.94
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	98.94
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	98.94
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	98.94
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	98.94
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	98.93
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	98.93
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	98.92
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	98.92
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	98.91
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	98.91
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	98.9
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	98.9
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	98.9
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	98.88
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	98.87
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	98.85
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	98.85
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	98.84
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	98.83
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	98.81
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	98.81
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	98.81
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	98.8
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	98.79
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	98.79
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	98.79
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	98.78
2dyl_A	318	Dual specificity mitogen-activated protein kinase	98.78
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	98.77
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	98.74
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	98.74
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	98.72
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	98.72
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	98.71
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	98.65
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	98.59
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	98.4
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	98.03
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	97.99
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	97.68
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	96.93
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	96.87
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	96.03
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	93.77
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	92.11
2ks1_B	44	Epidermal growth factor receptor; ERBB1, ERBB2, tr	90.41
2l2t_A	44	Receptor tyrosine-protein kinase ERBB-4; transmemb	89.09
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	88.9
3cxl_A	463	N-chimerin; SH2, RHO-GAP, structural genomics cons	88.38
2jwa_A	44	Receptor tyrosine-protein kinase ERBB-2; transmemb	87.2
2k1k_A	38	Ephrin type-A receptor 1; EPHA1, receptor tyrosine	85.53
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	85.43
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	85.0
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	84.78
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	80.71

>3a2e_A Ginkbilobin-2; domain 26 unknown function (DUF26), C-X8-C-X2-C motif, antifungal protein, embryo-abundant protein (EAP), plant protein; 2.38A {Ginkgo biloba}

Probab=99.95  E-value=4.3e-29  Score=201.01  Aligned_cols=105  Identities=17%  Similarity=0.437  Sum_probs=95.5

Q ss_pred             CCccccCCC-CccccCCChHHHHHHHHHHhcccccCCCCCCCCCceecccCCC-CCeEEEEEEeeCCCCccchHHHHHHH
Q 013018           34 DPTYAYHVC-SANFTGNSTYQTNRNLLLSSLPTNASRGNGYSSGFYNETTGQD-PNKVYGLFLCRGDQTASSCQDCVTFA  111 (451)
Q Consensus        34 ~~~~~~~~c-~~~~~~~~~~~~~l~~ll~~l~~~a~~~~~~~~~f~~~~~~~~-~~~vygl~qC~~d~~~~~C~~Cl~~a  111 (451)
                      ++.++++.| .++|+++++|++||+.||++|+++++   .++.+|+++..+.. +++||||+|||||+++++|..||+.|
T Consensus         2 ~t~~v~~~Cn~~~~t~~s~f~~nl~~ll~~L~~~a~---~s~~~~~t~~~~~~~~~~vygl~qC~~Dls~~~C~~Cl~~a   78 (108)
T 3a2e_A            2 NTAFVSSACNTQKIPSGSPFNRNLRAMLADLRQNTA---FSGYDYKTSRAGSGGAPTAYGRATCKQSISQSDCTACLSNL   78 (108)
T ss_dssp             CCCEEEEEECSSBCCTTCTHHHHHHHHHHHHHHHGG---GTTSEEEEEECCSTTCCCEEEEEEECTTSCHHHHHHHHHHH
T ss_pred             CcceeeeecCCCccCCCChHHHHHHHHHHHHHhhCc---cccCCceEeeccCCCCceEEEEEEEcCCCCHHHHHHHHHHH
Confidence            467889999 58999999999999999999999885   24456788777654 49999999999999999999999999


Q ss_pred             HHHHhhhCCCCceeEEEcceeEEEEccccc
Q 013018          112 TRDLVQRCPDGKQTIIWYDQCLLRYSNRSI  141 (451)
Q Consensus       112 ~~~~~~~c~~~~~~~i~~~~C~~ry~~~~f  141 (451)
                      +.++++.||+++||+||+++|+||||+++|
T Consensus        79 ~~~~~~~C~~~~g~~i~~~~C~lRY~~~~F  108 (108)
T 3a2e_A           79 VNRIFSICNNAIGARVQLVDCFIQYEQRSF  108 (108)
T ss_dssp             HTTHHHHTTSBSSEEEEETTEEEEEESSCC
T ss_pred             HHHHHHHCCCCceEEEECCCEEEEEeCCcC
Confidence            999999999999999999999999999998

>3a2e_A Ginkbilobin-2; domain 26 unknown function (DUF26), C-X8-C-X2-C motif, antifungal protein, embryo-abundant protein (EAP), plant protein; 2.38A {Ginkgo biloba}

Probab=99.88  E-value=1.1e-22  Score=163.52  Aligned_cols=105  Identities=26%  Similarity=0.477  Sum_probs=96.0

Q ss_pred             CceEEEecccCCCchhhHHHHHHHHHHHHHHHHhcCCccceeeecccCCcccEEEEEEecCCCChhchHHHHHHHHhhcc
Q 013018          148 VPYVSLLNTQNVTDRGRFNQILASLMSQVVNQAVNNSRKFATRTANFTALQTLYSLAQCTPDLSSSDCNVCLQAAIAELP  227 (451)
Q Consensus       148 ~~~~~~~~~~~~~~~~~f~~~~~~ll~~l~~~a~~~~~~~a~~~~~~~~~~~vy~laqC~~dl~~~~C~~Cl~~~~~~~~  227 (451)
                      ......|+.+++++++.|+++++.||..|...|+.++.+|+++..+..+.++||||+||+||+++.+|..||+.++.+++
T Consensus         4 ~~v~~~Cn~~~~t~~s~f~~nl~~ll~~L~~~a~~s~~~~~t~~~~~~~~~~vygl~qC~~Dls~~~C~~Cl~~a~~~~~   83 (108)
T 3a2e_A            4 AFVSSACNTQKIPSGSPFNRNLRAMLADLRQNTAFSGYDYKTSRAGSGGAPTAYGRATCKQSISQSDCTACLSNLVNRIF   83 (108)
T ss_dssp             CEEEEEECSSBCCTTCTHHHHHHHHHHHHHHHGGGTTSEEEEEECCSTTCCCEEEEEEECTTSCHHHHHHHHHHHHTTHH
T ss_pred             ceeeeecCCCccCCCChHHHHHHHHHHHHHhhCccccCCceEeeccCCCCceEEEEEEEcCCCCHHHHHHHHHHHHHHHH
Confidence            34456799999999999999999999999999988777788777665667899999999999999999999999999999


Q ss_pred             cccCCCCCcEEEccccccccccccc
Q 013018          228 NCCSGKTGAQVLIPSCIVRYEFYPF  252 (451)
Q Consensus       228 ~~c~~~~g~~v~~~~C~~ry~~~~f  252 (451)
                      ++|+++.|++++.+.|++||+.++|
T Consensus        84 ~~C~~~~g~~i~~~~C~lRY~~~~F  108 (108)
T 3a2e_A           84 SICNNAIGARVQLVDCFIQYEQRSF  108 (108)
T ss_dssp             HHTTSBSSEEEEETTEEEEEESSCC
T ss_pred             HHCCCCceEEEECCCEEEEEeCCcC
Confidence            9999999999999999999999986

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.75  E-value=1.7e-18  Score=165.75  Aligned_cols=106  Identities=30%  Similarity=0.534  Sum_probs=89.8

Q ss_pred             hhccccccceecccCceeEEEEEcC------CCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCcee
Q 013018          344 ATNNFSTDNKLGEGGFGEVYKGVLP------SGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEK  417 (451)
Q Consensus       344 ~~~~~~~~~~lG~G~fg~V~~~~l~------~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~  417 (451)
                      ..++|...++||+|+||.||+|.+.      ++..||||+++....+..++|.+|+.+|++++|||||+++|++...++.
T Consensus        11 ~r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~   90 (299)
T 4asz_A           11 KRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPL   90 (299)
T ss_dssp             CGGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSE
T ss_pred             CHHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEE
Confidence            3456788899999999999999853      4678999999877766778999999999999999999999999999999


Q ss_pred             eEEEeccCCCCHHHHHhccC----------CCCCCchhhhhc
Q 013018          418 ILVYEFVPNKSLDYFLYAQS----------PKNNNNWIGQDA  449 (451)
Q Consensus       418 ~lv~ey~~~GsL~~~L~~~~----------~~~~l~W~~r~~  449 (451)
                      +||||||++|+|.++|+..+          ....|+|.+++.
T Consensus        91 ~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~  132 (299)
T 4asz_A           91 IMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLH  132 (299)
T ss_dssp             EEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHH
T ss_pred             EEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHH
Confidence            99999999999999998643          234689987764

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.75  E-value=2.6e-18  Score=166.66  Aligned_cols=105  Identities=30%  Similarity=0.517  Sum_probs=90.8

Q ss_pred             hccccccceecccCceeEEEEEcC------CCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceee
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGVLP------SGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKI  418 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~l~------~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~  418 (451)
                      .+++...++||+|+||.||+|.+.      +++.||||+++....+..++|.+|+.+|++++|||||+++|+|...++.+
T Consensus        40 ~~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~  119 (329)
T 4aoj_A           40 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLL  119 (329)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEE
T ss_pred             HHHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEE
Confidence            345677889999999999999864      47889999998777777789999999999999999999999999999999


Q ss_pred             EEEeccCCCCHHHHHhccCC------------CCCCchhhhhc
Q 013018          419 LVYEFVPNKSLDYFLYAQSP------------KNNNNWIGQDA  449 (451)
Q Consensus       419 lv~ey~~~GsL~~~L~~~~~------------~~~l~W~~r~~  449 (451)
                      ||||||++|+|.++|+....            ...|+|.+++.
T Consensus       120 lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~  162 (329)
T 4aoj_A          120 MVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLA  162 (329)
T ss_dssp             EEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHH
T ss_pred             EEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHH
Confidence            99999999999999997543            23588887764

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.73  E-value=3.6e-18  Score=164.16  Aligned_cols=104  Identities=33%  Similarity=0.484  Sum_probs=86.1

Q ss_pred             ccccccceecccCceeEEEEEcC------CCcEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceee
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVLP------SGQEIAVKRLSRSS-GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKI  418 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l~------~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~  418 (451)
                      ++++..++||+|+||.||+|.+.      +++.||||+++... ....++|.+|+.+|++++|||||+++|+|...++.+
T Consensus        26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~  105 (308)
T 4gt4_A           26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLS  105 (308)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred             HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEE
Confidence            44666789999999999999862      46789999997543 334578999999999999999999999999999999


Q ss_pred             EEEeccCCCCHHHHHhccCC-------------CCCCchhhhhc
Q 013018          419 LVYEFVPNKSLDYFLYAQSP-------------KNNNNWIGQDA  449 (451)
Q Consensus       419 lv~ey~~~GsL~~~L~~~~~-------------~~~l~W~~r~~  449 (451)
                      ||||||++|+|.++|+.+.+             ...|+|.+++.
T Consensus       106 lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  149 (308)
T 4gt4_A          106 MIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVH  149 (308)
T ss_dssp             EEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHH
T ss_pred             EEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHH
Confidence            99999999999999986543             23578877754

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.66  E-value=1.7e-16  Score=152.12  Aligned_cols=103  Identities=26%  Similarity=0.418  Sum_probs=85.7

Q ss_pred             HHhhccccccceecccCceeEEEEEcCCCcEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeE
Q 013018          342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRS--SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKIL  419 (451)
Q Consensus       342 ~~~~~~~~~~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l  419 (451)
                      ++..+++...++||+|+||.||+|.+.+  .||||.++..  ..+..++|.+|+.+|++++|||||+++|++. .++++|
T Consensus        32 ei~~~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~-~~~~~i  108 (307)
T 3omv_A           32 EIEASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAI  108 (307)
T ss_dssp             BCCTTSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEE
T ss_pred             EEcHHHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE-CCeEEE
Confidence            4556678888999999999999999743  6999998743  3445678999999999999999999999885 467899


Q ss_pred             EEeccCCCCHHHHHhccCCCCCCchhhhhc
Q 013018          420 VYEFVPNKSLDYFLYAQSPKNNNNWIGQDA  449 (451)
Q Consensus       420 v~ey~~~GsL~~~L~~~~~~~~l~W~~r~~  449 (451)
                      |||||++|+|.++|+...  ..++|.+++.
T Consensus       109 VmEy~~gGsL~~~l~~~~--~~l~~~~~~~  136 (307)
T 3omv_A          109 VTQWCEGSSLYKHLHVQE--TKFQMFQLID  136 (307)
T ss_dssp             EEECCSSCBHHHHHHTSC--CCCCHHHHHH
T ss_pred             EEEcCCCCCHHHHHhhcC--CCCCHHHHHH
Confidence            999999999999998643  3488877653

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.62  E-value=7.2e-16  Score=150.76  Aligned_cols=104  Identities=24%  Similarity=0.418  Sum_probs=87.4

Q ss_pred             cccChHHHHHhhccccccceecccCceeEEEEEcCC------CcEEEEEEeccCCh-hhHHHHHHHHHHHhcCC-CCCcc
Q 013018          334 LQFDFETIEVATNNFSTDNKLGEGGFGEVYKGVLPS------GQEIAVKRLSRSSG-QGGQEFKNEVVLVAKLQ-HRNLV  405 (451)
Q Consensus       334 ~~~~~~~l~~~~~~~~~~~~lG~G~fg~V~~~~l~~------g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~-h~niv  405 (451)
                      ..++.++++++.++|+..++||+|+||.||+|.+..      ++.||||++..... ...++|.+|+.+|.+++ |||||
T Consensus        52 lp~~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV  131 (353)
T 4ase_A           52 LPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV  131 (353)
T ss_dssp             SCCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred             CCCCCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEE
Confidence            345667888999999999999999999999998532      35899999976543 34578999999999995 59999


Q ss_pred             cceeEEEeC-ceeeEEEeccCCCCHHHHHhccC
Q 013018          406 RLLGFCLEG-EEKILVYEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       406 ~l~g~~~~~-~~~~lv~ey~~~GsL~~~L~~~~  437 (451)
                      +++|+|... ++++||||||++|+|.++|+..+
T Consensus       132 ~l~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~  164 (353)
T 4ase_A          132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKR  164 (353)
T ss_dssp             CEEEEECCTTSCCEEEEECCTTEEHHHHHHHTG
T ss_pred             EEEEEEEecCCEEEEEEEcCCCCCHHHHHHhcc
Confidence            999999764 57899999999999999998643

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.61  E-value=1.4e-15  Score=147.92  Aligned_cols=92  Identities=24%  Similarity=0.358  Sum_probs=76.7

Q ss_pred             ccccccceecccCceeEEEEE-cCCCcEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEe
Q 013018          346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRS--SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  422 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  422 (451)
                      ++|...++||+|+||.||++. ..+|+.||||++...  .....+.|.+|+.+|++++|||||++++++...+.++||||
T Consensus        24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE  103 (350)
T 4b9d_A           24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD  103 (350)
T ss_dssp             CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence            578889999999999999999 567999999999754  33445789999999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhccC
Q 013018          423 FVPNKSLDYFLYAQS  437 (451)
Q Consensus       423 y~~~GsL~~~L~~~~  437 (451)
                      |+++|+|.++|+.++
T Consensus       104 y~~gg~L~~~i~~~~  118 (350)
T 4b9d_A          104 YCEGGDLFKRINAQK  118 (350)
T ss_dssp             CCTTCBHHHHHHHTT
T ss_pred             CCCCCcHHHHHHHcC
Confidence            999999999998644

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.61  E-value=1.1e-15  Score=146.84  Aligned_cols=97  Identities=24%  Similarity=0.321  Sum_probs=78.1

Q ss_pred             cccccceecccCceeEEEEEcCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCc----eeeEEEe
Q 013018          347 NFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGE----EKILVYE  422 (451)
Q Consensus       347 ~~~~~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~----~~~lv~e  422 (451)
                      ++...++||+|+||.||+|++ +|+.||||++..... ....+..|+..+.+++|||||+++|++...+    +++||||
T Consensus         4 ~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~-~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~E   81 (303)
T 3hmm_A            4 TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREE-RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSD   81 (303)
T ss_dssp             GEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEE
T ss_pred             EEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccch-hhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEec
Confidence            466788999999999999998 689999999965422 1223345666667899999999999998643    6799999


Q ss_pred             ccCCCCHHHHHhccCCCCCCchhhhhc
Q 013018          423 FVPNKSLDYFLYAQSPKNNNNWIGQDA  449 (451)
Q Consensus       423 y~~~GsL~~~L~~~~~~~~l~W~~r~~  449 (451)
                      ||++|+|.++|+..    .++|.++++
T Consensus        82 y~~~gsL~~~l~~~----~l~~~~~~~  104 (303)
T 3hmm_A           82 YHEHGSLFDYLNRY----TVTVEGMIK  104 (303)
T ss_dssp             CCTTCBHHHHHHHC----CBCHHHHHH
T ss_pred             CCCCCcHHHHHHhC----CCCHHHHHH
Confidence            99999999999864    378887754

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.58  E-value=1.6e-15  Score=147.21  Aligned_cols=91  Identities=30%  Similarity=0.392  Sum_probs=81.4

Q ss_pred             ccccccceecccCceeEEEEE-cCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEecc
Q 013018          346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFV  424 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~  424 (451)
                      +.|+..++||+|+||.||++. ..+|+.||||++........+.+.+|+.+|++++|||||++++++...+.++|||||+
T Consensus        74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~  153 (346)
T 4fih_A           74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL  153 (346)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence            457788999999999999999 4579999999997654445567899999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcc
Q 013018          425 PNKSLDYFLYAQ  436 (451)
Q Consensus       425 ~~GsL~~~L~~~  436 (451)
                      ++|+|.++|+..
T Consensus       154 ~gg~L~~~l~~~  165 (346)
T 4fih_A          154 EGGALTDIVTHT  165 (346)
T ss_dssp             TTEEHHHHHHHS
T ss_pred             CCCcHHHHHHcC
Confidence            999999999863

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.57  E-value=3.6e-15  Score=148.52  Aligned_cols=92  Identities=29%  Similarity=0.387  Sum_probs=82.8

Q ss_pred             hccccccceecccCceeEEEEE-cCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEec
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  423 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey  423 (451)
                      .+.|+..++||+|+||.||++. ..+|+.||||++........+.+.+|+.+|++++|||||++++++...+.+||||||
T Consensus       150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy  229 (423)
T 4fie_A          150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF  229 (423)
T ss_dssp             GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeC
Confidence            3568889999999999999999 567999999999766555556799999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcc
Q 013018          424 VPNKSLDYFLYAQ  436 (451)
Q Consensus       424 ~~~GsL~~~L~~~  436 (451)
                      |++|+|.++|+..
T Consensus       230 ~~gG~L~~~i~~~  242 (423)
T 4fie_A          230 LEGGALTDIVTHT  242 (423)
T ss_dssp             CTTEEHHHHHHHS
T ss_pred             CCCCcHHHHHhcc
Confidence            9999999999854

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.56  E-value=9.2e-15  Score=138.92  Aligned_cols=95  Identities=27%  Similarity=0.351  Sum_probs=78.5

Q ss_pred             cccceecccCceeEEEEE-cCCCcEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCcccceeEEEe----CceeeEEE
Q 013018          349 STDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRS--SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLE----GEEKILVY  421 (451)
Q Consensus       349 ~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~----~~~~~lv~  421 (451)
                      ...++||+|+||.||+|. ...+..||||.+...  .....+.|.+|+.+|++++|||||++++++..    .+.++|||
T Consensus        29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm  108 (290)
T 3fpq_A           29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT  108 (290)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred             EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence            556789999999999999 456899999999643  33445789999999999999999999999865    34578999


Q ss_pred             eccCCCCHHHHHhccCCCCCCchhh
Q 013018          422 EFVPNKSLDYFLYAQSPKNNNNWIG  446 (451)
Q Consensus       422 ey~~~GsL~~~L~~~~~~~~l~W~~  446 (451)
                      |||++|+|.++|+....   ++|.+
T Consensus       109 Ey~~gg~L~~~l~~~~~---l~~~~  130 (290)
T 3fpq_A          109 ELMTSGTLKTYLKRFKV---MKIKV  130 (290)
T ss_dssp             ECCCSCBHHHHHHHHSS---CCHHH
T ss_pred             eCCCCCCHHHHHHhcCC---CCHHH
Confidence            99999999999986543   55543

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.56  E-value=9.7e-15  Score=139.69  Aligned_cols=100  Identities=22%  Similarity=0.351  Sum_probs=80.8

Q ss_pred             ccccccceecccCceeEEEEE-cCCCcEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCc--------
Q 013018          346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSS-GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGE--------  415 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~--------  415 (451)
                      ++|+..+.||+|+||.||++. ..+|+.||||++.... ....+.+.+|+.+|++++|||||++++++...+        
T Consensus         5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~   84 (299)
T 4g31_A            5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS   84 (299)
T ss_dssp             HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred             hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence            357888999999999999999 5579999999997543 334577999999999999999999999886533        


Q ss_pred             ----eeeEEEeccCCCCHHHHHhccCCCCCCchh
Q 013018          416 ----EKILVYEFVPNKSLDYFLYAQSPKNNNNWI  445 (451)
Q Consensus       416 ----~~~lv~ey~~~GsL~~~L~~~~~~~~l~W~  445 (451)
                          .++|||||+++|+|.++|+.+......+|.
T Consensus        85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~  118 (299)
T 4g31_A           85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERS  118 (299)
T ss_dssp             --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHH
T ss_pred             CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHH
Confidence                368999999999999999976654445543

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.55  E-value=5e-15  Score=141.66  Aligned_cols=92  Identities=22%  Similarity=0.289  Sum_probs=81.5

Q ss_pred             ccccccceecccCceeEEEEE-cCCCcEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEE
Q 013018          346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRS---SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  421 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~  421 (451)
                      ++|+..++||+|+||.||++. ..+|+.||||.+...   .....+.+.+|+.+|++++|||||++++++.+.+.++|||
T Consensus        32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm  111 (311)
T 4aw0_A           32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL  111 (311)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            458889999999999999999 567999999999743   2234577999999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhccC
Q 013018          422 EFVPNKSLDYFLYAQS  437 (451)
Q Consensus       422 ey~~~GsL~~~L~~~~  437 (451)
                      ||+++|+|.++|+..+
T Consensus       112 Ey~~gG~L~~~i~~~~  127 (311)
T 4aw0_A          112 SYAKNGELLKYIRKIG  127 (311)
T ss_dssp             CCCTTEEHHHHHHHHS
T ss_pred             ecCCCCCHHHHHHHcC
Confidence            9999999999998654

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.50  E-value=2.5e-14  Score=138.42  Aligned_cols=88  Identities=25%  Similarity=0.308  Sum_probs=77.2

Q ss_pred             hccccccceecccCceeEEEEE-cCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEec
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  423 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey  423 (451)
                      .+.|...++||+|+||.||++. ..+|+.||||+++...     ...+|+.+|++++|||||++++++...+.++|||||
T Consensus        57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~-----~~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy  131 (336)
T 4g3f_A           57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEV-----FRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMEL  131 (336)
T ss_dssp             TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT-----CCTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHH-----hHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEec
Confidence            3457778899999999999999 5679999999997542     124799999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhccC
Q 013018          424 VPNKSLDYFLYAQS  437 (451)
Q Consensus       424 ~~~GsL~~~L~~~~  437 (451)
                      +++|+|.++|+...
T Consensus       132 ~~gg~L~~~l~~~~  145 (336)
T 4g3f_A          132 LEGGSLGQLIKQMG  145 (336)
T ss_dssp             CTTCBHHHHHHHHS
T ss_pred             cCCCcHHHHHHHcC
Confidence            99999999998654

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.49  E-value=5.7e-14  Score=132.33  Aligned_cols=91  Identities=23%  Similarity=0.437  Sum_probs=75.7

Q ss_pred             ccccccceecccCceeEEEEE-cCCCcEEEEEEeccCC---hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEE
Q 013018          346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSS---GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  421 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~  421 (451)
                      ++|+..+.||+|+||.||++. ..+|+.||||.+....   ....+.+.+|+.+|++++|||||++++++...+..+|||
T Consensus        13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm   92 (275)
T 3hyh_A           13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI   92 (275)
T ss_dssp             -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence            568889999999999999999 5679999999997542   233467999999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhccC
Q 013018          422 EFVPNKSLDYFLYAQS  437 (451)
Q Consensus       422 ey~~~GsL~~~L~~~~  437 (451)
                      ||+ +|+|.++|..+.
T Consensus        93 Ey~-~g~L~~~l~~~~  107 (275)
T 3hyh_A           93 EYA-GNELFDYIVQRD  107 (275)
T ss_dssp             ECC-CEEHHHHHHHSC
T ss_pred             eCC-CCCHHHHHHHcC
Confidence            999 689999998654

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.45  E-value=2.1e-14  Score=137.17  Aligned_cols=92  Identities=22%  Similarity=0.243  Sum_probs=74.2

Q ss_pred             ccccccceecccCceeEEEEEc----CCCcEEEEEEeccCC--hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeE
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVL----PSGQEIAVKRLSRSS--GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKIL  419 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l----~~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l  419 (451)
                      ++|+..+.||+|+||.||++..    ..++.||||.++...  ......+.+|+.+|++++|||||++++++...+..+|
T Consensus        24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i  103 (304)
T 3ubd_A           24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL  103 (304)
T ss_dssp             GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred             cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence            4688899999999999999973    246899999997542  2233568899999999999999999999999999999


Q ss_pred             EEeccCCCCHHHHHhccC
Q 013018          420 VYEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       420 v~ey~~~GsL~~~L~~~~  437 (451)
                      ||||+++|+|.++|+...
T Consensus       104 vmEy~~gg~L~~~l~~~~  121 (304)
T 3ubd_A          104 ILDFLRGGDLFTRLSKEV  121 (304)
T ss_dssp             EECCCTTCEEHHHHHHHC
T ss_pred             EEEcCCCCCHHHHHHhcC
Confidence            999999999999998754

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.43  E-value=9.4e-14  Score=134.11  Aligned_cols=112  Identities=38%  Similarity=0.645  Sum_probs=96.0

Q ss_pred             ChHHHHHhhccccccceecccCceeEEEEEcCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCce
Q 013018          337 DFETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEE  416 (451)
Q Consensus       337 ~~~~l~~~~~~~~~~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~  416 (451)
                      ++.+++..+++|...+.||+|+||.||++...+++.||||++........+.+.+|+.++++++||||+++++++...+.
T Consensus        30 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~  109 (321)
T 2qkw_B           30 PLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNE  109 (321)
T ss_dssp             CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTC
T ss_pred             cHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCe
Confidence            33444556788999999999999999999988899999999987666667889999999999999999999999999999


Q ss_pred             eeEEEeccCCCCHHHHHhccCC-CCCCchhhhh
Q 013018          417 KILVYEFVPNKSLDYFLYAQSP-KNNNNWIGQD  448 (451)
Q Consensus       417 ~~lv~ey~~~GsL~~~L~~~~~-~~~l~W~~r~  448 (451)
                      .++|+||+++|+|.+++..... ...++|.+++
T Consensus       110 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~  142 (321)
T 2qkw_B          110 MILIYKYMENGNLKRHLYGSDLPTMSMSWEQRL  142 (321)
T ss_dssp             CEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHH
T ss_pred             EEEEEEcCCCCcHHHHHhccCCCccccCHHHHH
Confidence            9999999999999999987543 3357777654

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.43  E-value=3.7e-13  Score=140.15  Aligned_cols=92  Identities=22%  Similarity=0.382  Sum_probs=83.4

Q ss_pred             ccccccceecccCceeEEEEE-cCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEecc
Q 013018          346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFV  424 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~  424 (451)
                      ++|...++||+|+||.||++. ..+|+.||+|.+........+.+.+|+.+|++++|||||+|++++.....++||||||
T Consensus       157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~  236 (573)
T 3uto_A          157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM  236 (573)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeec
Confidence            568889999999999999999 5679999999998766556678999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhccC
Q 013018          425 PNKSLDYFLYAQS  437 (451)
Q Consensus       425 ~~GsL~~~L~~~~  437 (451)
                      ++|+|.++|....
T Consensus       237 ~gg~L~~~i~~~~  249 (573)
T 3uto_A          237 SGGELFEKVADEH  249 (573)
T ss_dssp             CCCBHHHHHTCTT
T ss_pred             CCCcHHHHHHHhC
Confidence            9999999997543

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.42  E-value=2.5e-13  Score=131.32  Aligned_cols=116  Identities=39%  Similarity=0.714  Sum_probs=98.6

Q ss_pred             ccccChHHHHHhhccccccceecccCceeEEEEEcCCCcEEEEEEeccCCh-hhHHHHHHHHHHHhcCCCCCcccceeEE
Q 013018          333 SLQFDFETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSG-QGGQEFKNEVVLVAKLQHRNLVRLLGFC  411 (451)
Q Consensus       333 ~~~~~~~~l~~~~~~~~~~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~  411 (451)
                      ...+++.++....++|...+.||+|+||.||++...+++.||||++..... .....+.+|+.++.+++||||+++++++
T Consensus        17 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~   96 (326)
T 3uim_A           17 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFC   96 (326)
T ss_dssp             CEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEE
T ss_pred             cceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEE
Confidence            346788999999999999999999999999999987899999999975432 2234789999999999999999999999


Q ss_pred             EeCceeeEEEeccCCCCHHHHHhccCC-CCCCchhhhh
Q 013018          412 LEGEEKILVYEFVPNKSLDYFLYAQSP-KNNNNWIGQD  448 (451)
Q Consensus       412 ~~~~~~~lv~ey~~~GsL~~~L~~~~~-~~~l~W~~r~  448 (451)
                      ...+..++|+||+++|+|.++|+.... ...++|..+.
T Consensus        97 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~  134 (326)
T 3uim_A           97 MTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQ  134 (326)
T ss_dssp             CCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHH
T ss_pred             ecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHH
Confidence            999999999999999999999997653 3457776654

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.42  E-value=7.6e-13  Score=126.69  Aligned_cols=116  Identities=40%  Similarity=0.620  Sum_probs=98.9

Q ss_pred             cccccChHHHHHhhcccccc------ceecccCceeEEEEEcCCCcEEEEEEeccC----ChhhHHHHHHHHHHHhcCCC
Q 013018          332 ESLQFDFETIEVATNNFSTD------NKLGEGGFGEVYKGVLPSGQEIAVKRLSRS----SGQGGQEFKNEVVLVAKLQH  401 (451)
Q Consensus       332 ~~~~~~~~~l~~~~~~~~~~------~~lG~G~fg~V~~~~l~~g~~vavK~l~~~----~~~~~~~~~~E~~~l~~l~h  401 (451)
                      ....+++.+++..+++|...      +.||+|+||.||++.. +++.||||.+...    ..+..+.+.+|+.++.+++|
T Consensus        11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h   89 (307)
T 2nru_A           11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQH   89 (307)
T ss_dssp             CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCC
T ss_pred             CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCC
Confidence            34567889999999988877      8999999999999997 6889999998643    22335789999999999999


Q ss_pred             CCcccceeEEEeCceeeEEEeccCCCCHHHHHhccCCCCCCchhhhh
Q 013018          402 RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPKNNNNWIGQD  448 (451)
Q Consensus       402 ~niv~l~g~~~~~~~~~lv~ey~~~GsL~~~L~~~~~~~~l~W~~r~  448 (451)
                      |||+++++++...+..++|+||+++|+|.+++........++|..+.
T Consensus        90 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~  136 (307)
T 2nru_A           90 ENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRC  136 (307)
T ss_dssp             TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHH
T ss_pred             CCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHH
Confidence            99999999999888999999999999999999876555567887654

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.39  E-value=1.5e-12  Score=124.88  Aligned_cols=102  Identities=20%  Similarity=0.387  Sum_probs=88.6

Q ss_pred             hccccccceecccCceeEEEEEc-CCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEec
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  423 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey  423 (451)
                      .++|...++||+|+||.||++.. .+++.||+|.+........+.|.+|+.++.+++||||+++++++...+..++|+||
T Consensus         9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~   88 (310)
T 3s95_A            9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEY   88 (310)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEe
Confidence            35678889999999999999994 56899999999776666778899999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhccCCCCCCchhhhh
Q 013018          424 VPNKSLDYFLYAQSPKNNNNWIGQD  448 (451)
Q Consensus       424 ~~~GsL~~~L~~~~~~~~l~W~~r~  448 (451)
                      +++|+|.++++...  ..++|.++.
T Consensus        89 ~~~~~L~~~l~~~~--~~~~~~~~~  111 (310)
T 3s95_A           89 IKGGTLRGIIKSMD--SQYPWSQRV  111 (310)
T ss_dssp             CTTCBHHHHHHHCC--TTSCHHHHH
T ss_pred             cCCCcHHHHHHhcc--CCCCHHHHH
Confidence            99999999998743  236676553

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.38  E-value=7.2e-13  Score=131.63  Aligned_cols=91  Identities=14%  Similarity=0.344  Sum_probs=77.1

Q ss_pred             ccccccceecccCceeEEEEE-cCCCcEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeC------ce
Q 013018          346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRS--SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEG------EE  416 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~------~~  416 (451)
                      ++|...++||+|+||.||++. ..+|+.||||++...  .....+.+.+|+.+|++++|||||++++++...      ..
T Consensus        54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~  133 (398)
T 4b99_A           54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS  133 (398)
T ss_dssp             SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred             CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence            468889999999999999999 567999999999754  233456789999999999999999999987642      57


Q ss_pred             eeEEEeccCCCCHHHHHhccC
Q 013018          417 KILVYEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       417 ~~lv~ey~~~GsL~~~L~~~~  437 (451)
                      ++||||||+ |+|.++|..++
T Consensus       134 ~~ivmE~~~-g~L~~~i~~~~  153 (398)
T 4b99_A          134 VYVVLDLME-SDLHQIIHSSQ  153 (398)
T ss_dssp             EEEEEECCS-EEHHHHHTSSS
T ss_pred             EEEEEeCCC-CCHHHHHHhcC
Confidence            899999995 78999998654

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.37  E-value=2.4e-12  Score=124.37  Aligned_cols=110  Identities=27%  Similarity=0.290  Sum_probs=91.9

Q ss_pred             ccChHHHHHhhcc----------ccccceecccCceeEEEEEcC-CCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCC
Q 013018          335 QFDFETIEVATNN----------FSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRN  403 (451)
Q Consensus       335 ~~~~~~l~~~~~~----------~~~~~~lG~G~fg~V~~~~l~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~n  403 (451)
                      .+++++++.+++.          |...+.||+|+||.||++... +|+.||||++........+.+.+|+.++.+++|||
T Consensus        24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n  103 (321)
T 2c30_A           24 VVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFN  103 (321)
T ss_dssp             -CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTT
T ss_pred             cCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCC
Confidence            4566777666543          566679999999999999954 79999999998766566778999999999999999


Q ss_pred             cccceeEEEeCceeeEEEeccCCCCHHHHHhccCCCCCCchhhhh
Q 013018          404 LVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPKNNNNWIGQD  448 (451)
Q Consensus       404 iv~l~g~~~~~~~~~lv~ey~~~GsL~~~L~~~~~~~~l~W~~r~  448 (451)
                      |+++++++...+..++||||+++|+|.+++...    .++|.++.
T Consensus       104 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~----~l~~~~~~  144 (321)
T 2c30_A          104 VVEMYKSYLVGEELWVLMEFLQGGALTDIVSQV----RLNEEQIA  144 (321)
T ss_dssp             BCCEEEEEEETTEEEEEECCCCSCBHHHHHTTC----CCCHHHHH
T ss_pred             cceEEEEEEECCEEEEEEecCCCCCHHHHHHhc----CCCHHHHH
Confidence            999999999999999999999999999998753    36666543

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.37  E-value=4.5e-13  Score=128.83  Aligned_cols=110  Identities=23%  Similarity=0.371  Sum_probs=90.2

Q ss_pred             hHHHHHhhccccccceecccCceeEEEEEcCCCcEEEEEEeccCC--hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCc
Q 013018          338 FETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSS--GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGE  415 (451)
Q Consensus       338 ~~~l~~~~~~~~~~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~  415 (451)
                      ..++.+..++|...+.||+|+||.||++.. .++.||||.+....  ....+++.+|+.++.+++||||+++++++...+
T Consensus        29 ~~~~~i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~  107 (309)
T 3p86_A           29 GDDMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPP  107 (309)
T ss_dssp             ---CBCCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTT
T ss_pred             cccccCChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC
Confidence            344456677889999999999999999987 68899999997543  334578999999999999999999999999988


Q ss_pred             eeeEEEeccCCCCHHHHHhccCCCCCCchhhhh
Q 013018          416 EKILVYEFVPNKSLDYFLYAQSPKNNNNWIGQD  448 (451)
Q Consensus       416 ~~~lv~ey~~~GsL~~~L~~~~~~~~l~W~~r~  448 (451)
                      ..++|+||+++|+|.++++.......++|..++
T Consensus       108 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~  140 (309)
T 3p86_A          108 NLSIVTEYLSRGSLYRLLHKSGAREQLDERRRL  140 (309)
T ss_dssp             CCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHH
T ss_pred             ceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHH
Confidence            999999999999999999975543346665543

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.34  E-value=2.3e-12  Score=127.24  Aligned_cols=102  Identities=29%  Similarity=0.479  Sum_probs=85.4

Q ss_pred             hccccccceecccCceeEEEEEcC----CCcEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeE
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGVLP----SGQEIAVKRLSRS-SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKIL  419 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~l~----~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l  419 (451)
                      .++|...+.||+|+||.||+|...    .+..||||.+... .....++|.+|+.++.+++||||++++|++...+..+|
T Consensus        44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l  123 (373)
T 2qol_A           44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI  123 (373)
T ss_dssp             GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred             HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence            456888999999999999999854    5678999999764 33445789999999999999999999999998889999


Q ss_pred             EEeccCCCCHHHHHhccCCCCCCchhhhh
Q 013018          420 VYEFVPNKSLDYFLYAQSPKNNNNWIGQD  448 (451)
Q Consensus       420 v~ey~~~GsL~~~L~~~~~~~~l~W~~r~  448 (451)
                      ||||+++|+|.++|+...  ..++|.+++
T Consensus       124 v~e~~~~~sL~~~l~~~~--~~~~~~~~~  150 (373)
T 2qol_A          124 VTEYMENGSLDSFLRKHD--AQFTVIQLV  150 (373)
T ss_dssp             EEECCTTCBHHHHHHTTT--TCSCHHHHH
T ss_pred             EEeCCCCCcHHHHHHhCC--CCCCHHHHH
Confidence            999999999999998643  346666543

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.33  E-value=4.3e-12  Score=122.51  Aligned_cols=100  Identities=21%  Similarity=0.335  Sum_probs=82.5

Q ss_pred             ccccccceecccCceeEEEEEc-CCCcEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCc--------
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSS-GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGE--------  415 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~--------  415 (451)
                      ++|...+.||+|+||.||++.. .+++.||||++.... ....+.+.+|+.++++++||||+++++++...+        
T Consensus         6 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~   85 (332)
T 3qd2_B            6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEM   85 (332)
T ss_dssp             HHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHH
T ss_pred             hcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhh
Confidence            4678889999999999999995 478999999997543 334578999999999999999999999986543        


Q ss_pred             -------------------------------------------------eeeEEEeccCCCCHHHHHhccCCCCCCchh
Q 013018          416 -------------------------------------------------EKILVYEFVPNKSLDYFLYAQSPKNNNNWI  445 (451)
Q Consensus       416 -------------------------------------------------~~~lv~ey~~~GsL~~~L~~~~~~~~l~W~  445 (451)
                                                                       ..++||||+++|+|.++++........+|.
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~  164 (332)
T 3qd2_B           86 DEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHG  164 (332)
T ss_dssp             HC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHH
T ss_pred             hhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhH
Confidence                                                             278999999999999999986655555553

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.32  E-value=6.5e-12  Score=119.92  Aligned_cols=92  Identities=24%  Similarity=0.452  Sum_probs=82.8

Q ss_pred             hccccccceecccCceeEEEEE-cCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEec
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  423 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey  423 (451)
                      .++|...+.||+|+||.||++. ..+++.||||.+........+.+.+|+.++.+++||||+++++++...+..++||||
T Consensus        19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~   98 (297)
T 3fxz_A           19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY   98 (297)
T ss_dssp             GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence            3568889999999999999999 567899999999766555567899999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcc
Q 013018          424 VPNKSLDYFLYAQ  436 (451)
Q Consensus       424 ~~~GsL~~~L~~~  436 (451)
                      +++|+|.+++...
T Consensus        99 ~~~~~L~~~~~~~  111 (297)
T 3fxz_A           99 LAGGSLTDVVTET  111 (297)
T ss_dssp             CTTCBHHHHHHHS
T ss_pred             CCCCCHHHHHhhc
Confidence            9999999999864

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.31  E-value=1.5e-12  Score=133.52  Aligned_cols=106  Identities=28%  Similarity=0.450  Sum_probs=88.6

Q ss_pred             HHHhhccccccceecccCceeEEEEEcC-CCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeE
Q 013018          341 IEVATNNFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKIL  419 (451)
Q Consensus       341 l~~~~~~~~~~~~lG~G~fg~V~~~~l~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l  419 (451)
                      +++..++|...++||+|+||.||+|... .+..||||.+.... ...++|.+|+.+|++++||||++++|++...+..+|
T Consensus       215 ~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l  293 (495)
T 1opk_A          215 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI  293 (495)
T ss_dssp             CBCCGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred             cccCHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEE
Confidence            3445567888999999999999999964 48899999997553 346789999999999999999999999999899999


Q ss_pred             EEeccCCCCHHHHHhccCCCCCCchhhhh
Q 013018          420 VYEFVPNKSLDYFLYAQSPKNNNNWIGQD  448 (451)
Q Consensus       420 v~ey~~~GsL~~~L~~~~~~~~l~W~~r~  448 (451)
                      ||||+++|+|.++|+.... ..++|..++
T Consensus       294 v~E~~~~g~L~~~l~~~~~-~~~~~~~~~  321 (495)
T 1opk_A          294 ITEFMTYGNLLDYLRECNR-QEVSAVVLL  321 (495)
T ss_dssp             EEECCTTCBHHHHHHHSCT-TTSCHHHHH
T ss_pred             EEEccCCCCHHHHHHhcCc-CCCCHHHHH
Confidence            9999999999999986432 346665543

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.31  E-value=5.8e-12  Score=121.87  Aligned_cols=101  Identities=26%  Similarity=0.448  Sum_probs=84.2

Q ss_pred             hccccccceecccCceeEEEEEcC----CCcEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeE
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGVLP----SGQEIAVKRLSRS-SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKIL  419 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~l~----~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l  419 (451)
                      .++|...+.||+|+||.||++...    .+..||||.+... .....+.|.+|+.++.+++||||+++++++...+..+|
T Consensus        48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  127 (325)
T 3kul_A           48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMI  127 (325)
T ss_dssp             GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEE
T ss_pred             hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEE
Confidence            356788899999999999999953    3456999999765 34445789999999999999999999999988889999


Q ss_pred             EEeccCCCCHHHHHhccCCCCCCchhhh
Q 013018          420 VYEFVPNKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       420 v~ey~~~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                      ||||+++|+|.++|+....  .++|.++
T Consensus       128 v~e~~~~~~L~~~l~~~~~--~~~~~~~  153 (325)
T 3kul_A          128 VTEYMENGSLDTFLRTHDG--QFTIMQL  153 (325)
T ss_dssp             EEECCTTCBHHHHHHTTTT--CSCHHHH
T ss_pred             EeeCCCCCcHHHHHHhccc--CCCHHHH
Confidence            9999999999999976432  3566544

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.30  E-value=7.6e-13  Score=130.88  Aligned_cols=104  Identities=24%  Similarity=0.405  Sum_probs=86.6

Q ss_pred             HHhhccccccceecccCceeEEEEEcC-CCcEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeE
Q 013018          342 EVATNNFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSRSS-GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKIL  419 (451)
Q Consensus       342 ~~~~~~~~~~~~lG~G~fg~V~~~~l~-~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l  419 (451)
                      +...++|...+.||+|+||.||+|... +++.||||.+.... ....++|.+|+.+|++++||||++++|++...+..+|
T Consensus       110 ~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l  189 (377)
T 3cbl_A          110 VLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYI  189 (377)
T ss_dssp             BCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred             EEchHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEE
Confidence            445567888999999999999999964 78999999997543 3334679999999999999999999999998889999


Q ss_pred             EEeccCCCCHHHHHhccCCCCCCchhhh
Q 013018          420 VYEFVPNKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       420 v~ey~~~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                      ||||+++|+|.++|+...  ..++|.+.
T Consensus       190 v~e~~~~g~L~~~l~~~~--~~~~~~~~  215 (377)
T 3cbl_A          190 VMELVQGGDFLTFLRTEG--ARLRVKTL  215 (377)
T ss_dssp             EEECCTTCBHHHHHHHHG--GGCCHHHH
T ss_pred             EEEcCCCCCHHHHHHhcC--CCCCHHHH
Confidence            999999999999998643  22455443

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.30  E-value=2.6e-12  Score=125.72  Aligned_cols=103  Identities=23%  Similarity=0.432  Sum_probs=87.5

Q ss_pred             ccChHHHHHhhccccccceecccCceeEEEEEc------CCCcEEEEEEeccCC-hhhHHHHHHHHHHHhcC-CCCCccc
Q 013018          335 QFDFETIEVATNNFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRLSRSS-GQGGQEFKNEVVLVAKL-QHRNLVR  406 (451)
Q Consensus       335 ~~~~~~l~~~~~~~~~~~~lG~G~fg~V~~~~l------~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~h~niv~  406 (451)
                      .++..+++...++|...+.||+|+||.||++..      .+++.||||++.... ....+.+.+|+.++.++ +||||++
T Consensus        11 ~~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~   90 (359)
T 3vhe_A           11 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN   90 (359)
T ss_dssp             CCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             CCCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceee
Confidence            355677788889999999999999999999973      345789999997643 33457799999999999 7999999


Q ss_pred             ceeEEEeCc-eeeEEEeccCCCCHHHHHhccC
Q 013018          407 LLGFCLEGE-EKILVYEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       407 l~g~~~~~~-~~~lv~ey~~~GsL~~~L~~~~  437 (451)
                      +++++...+ ..++||||+++|+|.++|+...
T Consensus        91 ~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~  122 (359)
T 3vhe_A           91 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKR  122 (359)
T ss_dssp             EEEEECSTTSCCEEEEECCTTEEHHHHHHTTT
T ss_pred             eeeeeecCCCceEEEEEecCCCcHHHHHHhcc
Confidence            999988754 4899999999999999999754

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.30  E-value=4.1e-12  Score=123.49  Aligned_cols=97  Identities=32%  Similarity=0.578  Sum_probs=83.8

Q ss_pred             HHHhhccccccceecccCceeEEEEEcC------CCcEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCcccceeEEEe
Q 013018          341 IEVATNNFSTDNKLGEGGFGEVYKGVLP------SGQEIAVKRLSRSS-GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLE  413 (451)
Q Consensus       341 l~~~~~~~~~~~~lG~G~fg~V~~~~l~------~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~  413 (451)
                      +....++|...+.||+|+||.||++...      .++.||||.+.... ....+.|.+|+.++.+++||||+++++++..
T Consensus        42 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~  121 (343)
T 1luf_A           42 LEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAV  121 (343)
T ss_dssp             TBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS
T ss_pred             eEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc
Confidence            3445678889999999999999999963      34789999997653 3345789999999999999999999999999


Q ss_pred             CceeeEEEeccCCCCHHHHHhccC
Q 013018          414 GEEKILVYEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       414 ~~~~~lv~ey~~~GsL~~~L~~~~  437 (451)
                      .+..++|+||+++|+|.++|+...
T Consensus       122 ~~~~~lv~e~~~~~~L~~~l~~~~  145 (343)
T 1luf_A          122 GKPMCLLFEYMAYGDLNEFLRSMS  145 (343)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHHTC
T ss_pred             CCceEEEEecCCCCcHHHHHHHhC
Confidence            899999999999999999998754

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.29  E-value=7.5e-12  Score=120.56  Aligned_cols=103  Identities=25%  Similarity=0.288  Sum_probs=85.8

Q ss_pred             ccccccceecccCceeEEEEEc-CCCcEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCc--eeeEEE
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSS-GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGE--EKILVY  421 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~--~~~lv~  421 (451)
                      ++|...++||+|+||.||++.. .+++.||||++.... ....+.+.+|+.++.+++||||+++++++....  ..+|||
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~   88 (319)
T 4euu_A            9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM   88 (319)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred             CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence            4678889999999999999995 458999999997543 334577899999999999999999999988655  779999


Q ss_pred             eccCCCCHHHHHhccCCCCCCchhhhh
Q 013018          422 EFVPNKSLDYFLYAQSPKNNNNWIGQD  448 (451)
Q Consensus       422 ey~~~GsL~~~L~~~~~~~~l~W~~r~  448 (451)
                      ||+++|+|.++++.......++|.+..
T Consensus        89 e~~~~~~L~~~l~~~~~~~~~~~~~~~  115 (319)
T 4euu_A           89 EFCPCGSLYTVLEEPSNAYGLPESEFL  115 (319)
T ss_dssp             ECCTTCBHHHHHHSGGGTTCCCHHHHH
T ss_pred             eCCCCCCHHHHHHHhccccCCCHHHHH
Confidence            999999999999986554446665543

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.29  E-value=3e-12  Score=120.11  Aligned_cols=101  Identities=27%  Similarity=0.422  Sum_probs=85.9

Q ss_pred             hhccccccceecccCceeEEEEEcCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEec
Q 013018          344 ATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  423 (451)
Q Consensus       344 ~~~~~~~~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey  423 (451)
                      ..++|...+.||+|+||.||++...+++.||+|++.... ...+++.+|+.++.+++||||+++++++...+..++|+||
T Consensus         8 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   86 (269)
T 4hcu_A            8 DPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEF   86 (269)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred             ChhhceeeheecCCCccEEEEEEecCCCeEEEEEecccc-cCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEe
Confidence            345788899999999999999998788899999997553 2346799999999999999999999999988899999999


Q ss_pred             cCCCCHHHHHhccCCCCCCchhhh
Q 013018          424 VPNKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       424 ~~~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                      +++|+|.++++....  .+++...
T Consensus        87 ~~~~~L~~~l~~~~~--~~~~~~~  108 (269)
T 4hcu_A           87 MEHGCLSDYLRTQRG--LFAAETL  108 (269)
T ss_dssp             CTTCBHHHHHHTTTT--CCCHHHH
T ss_pred             CCCCcHHHHHHhcCc--ccCHHHH
Confidence            999999999986442  3555443

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.29  E-value=5.4e-12  Score=118.12  Aligned_cols=102  Identities=25%  Similarity=0.322  Sum_probs=85.2

Q ss_pred             hccccccceecccCceeEEEEEcCCCcEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeC--ceeeEE
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRS--SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEG--EEKILV  420 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~--~~~~lv  420 (451)
                      .++|...+.||+|+||.||++.. .+..+|||.+...  .....+.|.+|+.++.+++||||+++++++...  ...++|
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv   87 (271)
T 3kmu_A            9 FKQLNFLTKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLI   87 (271)
T ss_dssp             GGGCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEE
T ss_pred             HHHhHHHHHhcCCCcceEEEEEE-CCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEee
Confidence            45678889999999999999998 5889999999754  334457899999999999999999999999876  678999


Q ss_pred             EeccCCCCHHHHHhccCCCCCCchhhhh
Q 013018          421 YEFVPNKSLDYFLYAQSPKNNNNWIGQD  448 (451)
Q Consensus       421 ~ey~~~GsL~~~L~~~~~~~~l~W~~r~  448 (451)
                      +||+++|+|.++++.... ..++|.++.
T Consensus        88 ~e~~~~~~L~~~l~~~~~-~~~~~~~~~  114 (271)
T 3kmu_A           88 THWMPYGSLYNVLHEGTN-FVVDQSQAV  114 (271)
T ss_dssp             EECCTTCBHHHHHHSCSS-CCCCHHHHH
T ss_pred             ecccCCCcHHHHHhhccc-CCCCHHHHH
Confidence            999999999999987432 346665543

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.29  E-value=5.7e-12  Score=124.27  Aligned_cols=94  Identities=23%  Similarity=0.453  Sum_probs=81.3

Q ss_pred             hhccccccceecccCceeEEEEEc--------CCCcEEEEEEeccCC-hhhHHHHHHHHHHHhcC-CCCCcccceeEEEe
Q 013018          344 ATNNFSTDNKLGEGGFGEVYKGVL--------PSGQEIAVKRLSRSS-GQGGQEFKNEVVLVAKL-QHRNLVRLLGFCLE  413 (451)
Q Consensus       344 ~~~~~~~~~~lG~G~fg~V~~~~l--------~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~  413 (451)
                      ..++|...+.||+|+||.||++..        ..+..||||.+.... ....+.+.+|+.+|.++ +||||+++++++..
T Consensus        79 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~  158 (370)
T 2psq_A           79 PRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ  158 (370)
T ss_dssp             CGGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECS
T ss_pred             cHHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEcc
Confidence            346788899999999999999984        234679999997653 34457899999999999 89999999999999


Q ss_pred             CceeeEEEeccCCCCHHHHHhccC
Q 013018          414 GEEKILVYEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       414 ~~~~~lv~ey~~~GsL~~~L~~~~  437 (451)
                      .+..++|+||+++|+|.++|+..+
T Consensus       159 ~~~~~lv~e~~~~g~L~~~l~~~~  182 (370)
T 2psq_A          159 DGPLYVIVEYASKGNLREYLRARR  182 (370)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHHTC
T ss_pred             CCCEEEEEEcCCCCCHHHHHHhhC
Confidence            999999999999999999999754

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.29  E-value=3.7e-12  Score=128.97  Aligned_cols=101  Identities=27%  Similarity=0.418  Sum_probs=84.6

Q ss_pred             HHhhccccccceecccCceeEEEEEcCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCc-eeeEE
Q 013018          342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGE-EKILV  420 (451)
Q Consensus       342 ~~~~~~~~~~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~-~~~lv  420 (451)
                      ++..++|...+.||+|+||.||+|.. .++.||||.++...  ..+.|.+|+.+|++++||||+++++++...+ ..+||
T Consensus       189 ~i~~~~~~~~~~lG~G~fg~V~~~~~-~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv  265 (450)
T 1k9a_A          189 ALNMKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIV  265 (450)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEE
T ss_pred             ccChHHeEEEeeecCcCCeeEEEEEe-cCCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEE
Confidence            34556788899999999999999998 47899999997653  4478999999999999999999999988765 78999


Q ss_pred             EeccCCCCHHHHHhccCCCCCCchhh
Q 013018          421 YEFVPNKSLDYFLYAQSPKNNNNWIG  446 (451)
Q Consensus       421 ~ey~~~GsL~~~L~~~~~~~~l~W~~  446 (451)
                      |||+++|+|.++|+.... ..+++..
T Consensus       266 ~e~~~~g~L~~~l~~~~~-~~~~~~~  290 (450)
T 1k9a_A          266 TEYMAKGSLVDYLRSRGR-SVLGGDC  290 (450)
T ss_dssp             EECCTTCBHHHHHHHHCT-TTCCHHH
T ss_pred             EEecCCCcHHHHHHhcCC-CCCCHHH
Confidence            999999999999997532 2345543

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.29  E-value=3.5e-12  Score=129.36  Aligned_cols=96  Identities=29%  Similarity=0.454  Sum_probs=84.4

Q ss_pred             HHHHHhhccccccceecccCceeEEEEEcCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceee
Q 013018          339 ETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKI  418 (451)
Q Consensus       339 ~~l~~~~~~~~~~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~  418 (451)
                      +.+++..++|...+.||+|+||.||+|...++..||||.+.... ...++|.+|+.+|++++||||+++++++. .+..+
T Consensus       181 ~~~~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~  258 (454)
T 1qcf_A          181 DAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIY  258 (454)
T ss_dssp             TCSBCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCE
T ss_pred             cceeechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccE
Confidence            34556677889999999999999999998888999999997643 34678999999999999999999999986 66789


Q ss_pred             EEEeccCCCCHHHHHhcc
Q 013018          419 LVYEFVPNKSLDYFLYAQ  436 (451)
Q Consensus       419 lv~ey~~~GsL~~~L~~~  436 (451)
                      |||||+++|+|.++|+..
T Consensus       259 lv~e~~~~g~L~~~l~~~  276 (454)
T 1qcf_A          259 IITEFMAKGSLLDFLKSD  276 (454)
T ss_dssp             EEECCCTTCBHHHHHHSH
T ss_pred             EEEeecCCCcHHHHHHhc
Confidence            999999999999999864

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.28  E-value=9.1e-12  Score=120.76  Aligned_cols=93  Identities=23%  Similarity=0.385  Sum_probs=82.2

Q ss_pred             hccccccceecccCceeEEEEE-cCCCcEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEE
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRS--SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  421 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~  421 (451)
                      .++|...+.||+|+||.||++. ..+|+.||||++...  .....+.+.+|+.+|++++||||+++++++...+..++|+
T Consensus        14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~   93 (328)
T 3fe3_A           14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM   93 (328)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence            3568889999999999999999 468999999999654  3344577999999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhccC
Q 013018          422 EFVPNKSLDYFLYAQS  437 (451)
Q Consensus       422 ey~~~GsL~~~L~~~~  437 (451)
                      ||+++|+|.+++....
T Consensus        94 e~~~~~~L~~~l~~~~  109 (328)
T 3fe3_A           94 EYASGGEVFDYLVAHG  109 (328)
T ss_dssp             CCCTTCBHHHHHHHHC
T ss_pred             ECCCCCcHHHHHHHcC
Confidence            9999999999998654

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.28  E-value=3.9e-12  Score=120.51  Aligned_cols=93  Identities=33%  Similarity=0.584  Sum_probs=81.7

Q ss_pred             hccccccceecccCceeEEEEEcC-CC-------cEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCce
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGVLP-SG-------QEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEE  416 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~l~-~g-------~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~  416 (451)
                      .++|...+.||+|+||.||++... .+       ..|++|.+........+.+.+|+.++.+++||||+++++++...+.
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   86 (289)
T 4fvq_A            7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDE   86 (289)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTC
T ss_pred             hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCC
Confidence            456788899999999999999843 23       4799999977666667889999999999999999999999999999


Q ss_pred             eeEEEeccCCCCHHHHHhccC
Q 013018          417 KILVYEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       417 ~~lv~ey~~~GsL~~~L~~~~  437 (451)
                      .++|+||+++|+|.++++...
T Consensus        87 ~~lv~e~~~~~~L~~~l~~~~  107 (289)
T 4fvq_A           87 NILVQEFVKFGSLDTYLKKNK  107 (289)
T ss_dssp             CEEEEECCTTCBHHHHHHHTG
T ss_pred             CEEEEECCCCCCHHHHHHhCC
Confidence            999999999999999998743

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.28  E-value=6.2e-12  Score=119.63  Aligned_cols=101  Identities=28%  Similarity=0.487  Sum_probs=84.6

Q ss_pred             hccccccceecccCceeEEEEEc-----CCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeC--cee
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGVL-----PSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEG--EEK  417 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~l-----~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~--~~~  417 (451)
                      .++|+..+.||+|+||.||++.+     .+++.||||++........+.+.+|+.++.+++||||+++++++...  ...
T Consensus         9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   88 (295)
T 3ugc_A            9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL   88 (295)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSC
T ss_pred             HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCce
Confidence            45678899999999999999984     35789999999877666678899999999999999999999998653  458


Q ss_pred             eEEEeccCCCCHHHHHhccCCCCCCchhhh
Q 013018          418 ILVYEFVPNKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       418 ~lv~ey~~~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                      ++|+||+++|+|.++++....  .++|.+.
T Consensus        89 ~lv~e~~~~~~L~~~l~~~~~--~~~~~~~  116 (295)
T 3ugc_A           89 KLIMEYLPYGSLRDYLQKHKE--RIDHIKL  116 (295)
T ss_dssp             EEEEECCTTCBHHHHHHHCGG--GCCHHHH
T ss_pred             EEEEEeCCCCCHHHHHHhccc--ccCHHHH
Confidence            999999999999999987532  3555443

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.27  E-value=9.2e-12  Score=122.19  Aligned_cols=90  Identities=20%  Similarity=0.312  Sum_probs=77.9

Q ss_pred             hhccccccceecccCceeEEEEEc----CCCcEEEEEEeccCChhhHHHHHHHHHHHhcC-CCCCcccceeEEEeCceee
Q 013018          344 ATNNFSTDNKLGEGGFGEVYKGVL----PSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKI  418 (451)
Q Consensus       344 ~~~~~~~~~~lG~G~fg~V~~~~l----~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~  418 (451)
                      -.+.|+..++||+|+||.||++..    ..++.||||.+....  ....+.+|+.+|..+ +||||+++++++...+..+
T Consensus        19 l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~   96 (361)
T 4f9c_A           19 LSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVV   96 (361)
T ss_dssp             GGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEE
T ss_pred             ccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEE
Confidence            356799999999999999999973    246789999986543  345688999999998 6999999999999999999


Q ss_pred             EEEeccCCCCHHHHHhc
Q 013018          419 LVYEFVPNKSLDYFLYA  435 (451)
Q Consensus       419 lv~ey~~~GsL~~~L~~  435 (451)
                      |||||+++|+|.++++.
T Consensus        97 lvmE~~~g~~L~~~~~~  113 (361)
T 4f9c_A           97 IAMPYLEHESFLDILNS  113 (361)
T ss_dssp             EEEECCCCCCHHHHHTT
T ss_pred             EEEeCCCcccHHHHHcC
Confidence            99999999999999853

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.27  E-value=1.6e-11  Score=116.49  Aligned_cols=100  Identities=28%  Similarity=0.371  Sum_probs=83.2

Q ss_pred             cccccceecccCceeEEEEE-cCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEeccC
Q 013018          347 NFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVP  425 (451)
Q Consensus       347 ~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~~  425 (451)
                      ++....+||+|+||.||++. ..++..||||.+........+.+.+|+.++.+++||||+++++++...+..++|+||++
T Consensus        23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~  102 (295)
T 2clq_A           23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVP  102 (295)
T ss_dssp             TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred             CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCC
Confidence            34556699999999999999 56789999999987655556789999999999999999999999999999999999999


Q ss_pred             CCCHHHHHhccCCCCCCchhh
Q 013018          426 NKSLDYFLYAQSPKNNNNWIG  446 (451)
Q Consensus       426 ~GsL~~~L~~~~~~~~l~W~~  446 (451)
                      +|+|.++++.......+++..
T Consensus       103 ~~~L~~~l~~~~~~~~~~~~~  123 (295)
T 2clq_A          103 GGSLSALLRSKWGPLKDNEQT  123 (295)
T ss_dssp             EEEHHHHHHHTTCCCTTCHHH
T ss_pred             CCCHHHHHHhhccCCCccHHH
Confidence            999999998764444444443

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.27  E-value=4.3e-12  Score=122.96  Aligned_cols=97  Identities=30%  Similarity=0.495  Sum_probs=83.3

Q ss_pred             HHHHhhccccccceecccCceeEEEEEcC-CC-----cEEEEEEeccCC-hhhHHHHHHHHHHHhcC-CCCCcccceeEE
Q 013018          340 TIEVATNNFSTDNKLGEGGFGEVYKGVLP-SG-----QEIAVKRLSRSS-GQGGQEFKNEVVLVAKL-QHRNLVRLLGFC  411 (451)
Q Consensus       340 ~l~~~~~~~~~~~~lG~G~fg~V~~~~l~-~g-----~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~g~~  411 (451)
                      +++...++|...+.||+|+||.||++... .+     ..||+|.+.... ....+.+.+|+.++.++ +||||+++++++
T Consensus        40 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~  119 (333)
T 2i1m_A           40 KWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGAC  119 (333)
T ss_dssp             GGBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             cccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence            45566788999999999999999999842 22     479999997653 33457799999999999 899999999999


Q ss_pred             EeCceeeEEEeccCCCCHHHHHhcc
Q 013018          412 LEGEEKILVYEFVPNKSLDYFLYAQ  436 (451)
Q Consensus       412 ~~~~~~~lv~ey~~~GsL~~~L~~~  436 (451)
                      ...+..++|+||+++|+|.++|+..
T Consensus       120 ~~~~~~~lv~e~~~~g~L~~~l~~~  144 (333)
T 2i1m_A          120 THGGPVLVITEYCCYGDLLNFLRRK  144 (333)
T ss_dssp             CSSSSCEEEEECCTTEEHHHHHHHH
T ss_pred             ecCCceEEEEecCCCCcHHHHHHHh
Confidence            9989999999999999999999864

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.27  E-value=3.1e-12  Score=128.90  Aligned_cols=100  Identities=18%  Similarity=0.211  Sum_probs=85.1

Q ss_pred             ChHHHHHhhccccccceecccCceeEEEEEcC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHhcCCCCCcccceeEEE
Q 013018          337 DFETIEVATNNFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSRSSG---QGGQEFKNEVVLVAKLQHRNLVRLLGFCL  412 (451)
Q Consensus       337 ~~~~l~~~~~~~~~~~~lG~G~fg~V~~~~l~-~g~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~g~~~  412 (451)
                      .+.+++...++|...++||+|+||.||++... +++.+|||++.....   .....+.+|..++.+++||||+++++++.
T Consensus        65 ~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~  144 (437)
T 4aw2_A           65 KVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQ  144 (437)
T ss_dssp             HHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred             hhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe
Confidence            34566677889999999999999999999954 578999999964321   12234889999999999999999999999


Q ss_pred             eCceeeEEEeccCCCCHHHHHhcc
Q 013018          413 EGEEKILVYEFVPNKSLDYFLYAQ  436 (451)
Q Consensus       413 ~~~~~~lv~ey~~~GsL~~~L~~~  436 (451)
                      ..+..+|||||+++|+|.++|+..
T Consensus       145 ~~~~~~lV~Ey~~gg~L~~~l~~~  168 (437)
T 4aw2_A          145 DDNNLYLVMDYYVGGDLLTLLSKF  168 (437)
T ss_dssp             CSSEEEEEECCCTTCBHHHHHHTT
T ss_pred             eCCEEEEEEecCCCCcHHHHHHHc
Confidence            999999999999999999999863

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.27  E-value=1.5e-11  Score=117.07  Aligned_cols=99  Identities=22%  Similarity=0.346  Sum_probs=83.9

Q ss_pred             ccccccceecccCceeEEEEE-cCCCcEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEE
Q 013018          346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRS---SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  421 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~  421 (451)
                      ++|...+.||+|+||.||++. ...++.||+|.+...   .....+.|.+|+.++.+++||||+++++++...+..++||
T Consensus        11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   90 (294)
T 4eqm_A           11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVM   90 (294)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             ccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEE
Confidence            468889999999999999999 557899999998543   2333468999999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhccCCCCCCchhhh
Q 013018          422 EFVPNKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       422 ey~~~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                      ||+++|+|.+++....+   ++|.+.
T Consensus        91 e~~~g~~L~~~l~~~~~---~~~~~~  113 (294)
T 4eqm_A           91 EYIEGPTLSEYIESHGP---LSVDTA  113 (294)
T ss_dssp             ECCCSCBHHHHHHHHCS---CCHHHH
T ss_pred             eCCCCCCHHHHHHhcCC---CCHHHH
Confidence            99999999999986542   555443

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.27  E-value=1.9e-11  Score=120.04  Aligned_cols=92  Identities=24%  Similarity=0.372  Sum_probs=80.6

Q ss_pred             hccccccceecccCceeEEEEE-cCCCcEEEEEEeccCChh------hHHHHHHHHHHHhcCCCCCcccceeEEEeCcee
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQ------GGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEK  417 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~  417 (451)
                      .+.|...+.||+|+||.||++. ..+|+.+|+|.+......      ..+.+.+|+.++.+++||||+++++++......
T Consensus        11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~   90 (361)
T 2yab_A           11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV   90 (361)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred             hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence            3568889999999999999999 457899999999754321      357899999999999999999999999999999


Q ss_pred             eEEEeccCCCCHHHHHhcc
Q 013018          418 ILVYEFVPNKSLDYFLYAQ  436 (451)
Q Consensus       418 ~lv~ey~~~GsL~~~L~~~  436 (451)
                      +||+||+++|+|.++|...
T Consensus        91 ~lv~e~~~gg~L~~~l~~~  109 (361)
T 2yab_A           91 VLILELVSGGELFDFLAQK  109 (361)
T ss_dssp             EEEEECCCSCBHHHHHTTC
T ss_pred             EEEEEcCCCCcHHHHHHhc
Confidence            9999999999999999764

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.27  E-value=4.8e-12  Score=119.60  Aligned_cols=103  Identities=24%  Similarity=0.385  Sum_probs=84.1

Q ss_pred             HHhhccccccceecccCceeEEEEEcCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEE
Q 013018          342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  421 (451)
Q Consensus       342 ~~~~~~~~~~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~  421 (451)
                      +...++|...+.||+|+||.||++...++..||||.+..... ..+++.+|+.++.+++||||+++++++...+..++|+
T Consensus        20 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   98 (283)
T 3gen_A           20 EIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIIT   98 (283)
T ss_dssp             BCCGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEE
T ss_pred             cCCHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEE
Confidence            345667888999999999999999988888999999976532 3467999999999999999999999999888999999


Q ss_pred             eccCCCCHHHHHhccCCCCCCchhhh
Q 013018          422 EFVPNKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       422 ey~~~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                      ||+++|+|.++++....  .+++.+.
T Consensus        99 e~~~~~~L~~~l~~~~~--~~~~~~~  122 (283)
T 3gen_A           99 EYMANGCLLNYLREMRH--RFQTQQL  122 (283)
T ss_dssp             CCCTTCBHHHHHHCGGG--CCCHHHH
T ss_pred             eccCCCcHHHHHHHhcc--CCCHHHH
Confidence            99999999999986332  2555443

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.27  E-value=4.7e-12  Score=118.63  Aligned_cols=101  Identities=26%  Similarity=0.354  Sum_probs=85.7

Q ss_pred             hhccccccceecccCceeEEEEEcCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEec
Q 013018          344 ATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  423 (451)
Q Consensus       344 ~~~~~~~~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey  423 (451)
                      ..++|...+.||+|+||.||++...++..||||.+..... ..+++.+|+.++.+++||||+++++++......++|+||
T Consensus         6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   84 (268)
T 3sxs_A            6 KREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEY   84 (268)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred             chhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEc
Confidence            4567888999999999999999988888999999975532 346799999999999999999999999888899999999


Q ss_pred             cCCCCHHHHHhccCCCCCCchhhh
Q 013018          424 VPNKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       424 ~~~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                      +++|+|.++++....  .++|.+.
T Consensus        85 ~~~~~L~~~l~~~~~--~~~~~~~  106 (268)
T 3sxs_A           85 ISNGCLLNYLRSHGK--GLEPSQL  106 (268)
T ss_dssp             CTTCBHHHHHHHHGG--GCCHHHH
T ss_pred             cCCCcHHHHHHHcCC--CCCHHHH
Confidence            999999999986432  2455443

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.26  E-value=2.9e-12  Score=129.86  Aligned_cols=105  Identities=28%  Similarity=0.416  Sum_probs=86.5

Q ss_pred             HHHHhhccccccceecccCceeEEEEEcCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeE
Q 013018          340 TIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKIL  419 (451)
Q Consensus       340 ~l~~~~~~~~~~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l  419 (451)
                      .+++..++|...++||+|+||.||+|...++..||||.+.... ...++|.+|+.+|++++||||+++++++.. +..+|
T Consensus       178 ~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~i  255 (452)
T 1fmk_A          178 AWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYI  255 (452)
T ss_dssp             CSBCCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEE
T ss_pred             ccccChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEE
Confidence            3445667788899999999999999998777889999997643 235789999999999999999999999865 67899


Q ss_pred             EEeccCCCCHHHHHhccCCCCCCchhhh
Q 013018          420 VYEFVPNKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       420 v~ey~~~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                      ||||+++|+|.++|+.... ..++|.+.
T Consensus       256 v~e~~~~gsL~~~l~~~~~-~~~~~~~~  282 (452)
T 1fmk_A          256 VTEYMSKGSLLDFLKGETG-KYLRLPQL  282 (452)
T ss_dssp             EECCCTTCBHHHHHSHHHH-TTCCHHHH
T ss_pred             EehhhcCCCHHHHHHhcCC-CCCCHHHH
Confidence            9999999999999985321 23555443

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.26  E-value=1.4e-11  Score=116.00  Aligned_cols=93  Identities=23%  Similarity=0.348  Sum_probs=82.5

Q ss_pred             hccccccceecccCceeEEEEEc-CCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEec
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  423 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey  423 (451)
                      .++|...+.||+|+||.||++.. .++..+++|.+........+.+.+|+.++.+++||||+++++++......++|+||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   87 (277)
T 3f3z_A            8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMEL   87 (277)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEec
Confidence            34688889999999999999994 45789999999766555678899999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhccC
Q 013018          424 VPNKSLDYFLYAQS  437 (451)
Q Consensus       424 ~~~GsL~~~L~~~~  437 (451)
                      +++|+|.+++....
T Consensus        88 ~~~~~L~~~~~~~~  101 (277)
T 3f3z_A           88 CTGGELFERVVHKR  101 (277)
T ss_dssp             CCSCBHHHHHHHHC
T ss_pred             cCCCcHHHHHHHcC
Confidence            99999999998654

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.26  E-value=1.4e-11  Score=128.70  Aligned_cols=93  Identities=25%  Similarity=0.344  Sum_probs=76.7

Q ss_pred             hccccccceecccCceeEEEEE-cCCCcEEEEEEeccCC---hhhHHH---HHHHHHHHhcCCCCCcccceeEEEeCcee
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSS---GQGGQE---FKNEVVLVAKLQHRNLVRLLGFCLEGEEK  417 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~---~~~~~~---~~~E~~~l~~l~h~niv~l~g~~~~~~~~  417 (451)
                      .++|...++||+|+||.||++. ..+|+.+|||++....   .+....   ...++.++..++|||||++++++.+.+.+
T Consensus       188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l  267 (689)
T 3v5w_A          188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL  267 (689)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred             hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence            3568889999999999999999 5679999999996431   112222   33456778889999999999999999999


Q ss_pred             eEEEeccCCCCHHHHHhccC
Q 013018          418 ILVYEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       418 ~lv~ey~~~GsL~~~L~~~~  437 (451)
                      +|||||+++|+|.++|+...
T Consensus       268 ylVmEy~~GGdL~~~l~~~~  287 (689)
T 3v5w_A          268 SFILDLMNGGDLHYHLSQHG  287 (689)
T ss_dssp             EEEECCCCSCBHHHHHHHHC
T ss_pred             EEEEecCCCCcHHHHHHhcC
Confidence            99999999999999998654

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.25  E-value=2e-11  Score=118.21  Aligned_cols=98  Identities=23%  Similarity=0.332  Sum_probs=83.1

Q ss_pred             ccccccceecccCceeEEEEEc-CCCcEEEEEEeccCCh------hhHHHHHHHHHHHhcCCCCCcccceeEEEeCceee
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSG------QGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKI  418 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~  418 (451)
                      ++|...+.||+|+||.||++.. .+++.||+|.+.....      ...+.+.+|+.++.+++||||+++++++......+
T Consensus        11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~   90 (326)
T 2y0a_A           11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI   90 (326)
T ss_dssp             HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence            4578889999999999999994 5689999999975422      13578999999999999999999999999999999


Q ss_pred             EEEeccCCCCHHHHHhccCCCCCCchhh
Q 013018          419 LVYEFVPNKSLDYFLYAQSPKNNNNWIG  446 (451)
Q Consensus       419 lv~ey~~~GsL~~~L~~~~~~~~l~W~~  446 (451)
                      +|+||+++|+|.+++....   .+++.+
T Consensus        91 lv~e~~~~~~L~~~l~~~~---~~~~~~  115 (326)
T 2y0a_A           91 LILELVAGGELFDFLAEKE---SLTEEE  115 (326)
T ss_dssp             EEEECCCSCBHHHHHTTSS---CCBHHH
T ss_pred             EEEEcCCCCCHHHHHHhcC---CcCHHH
Confidence            9999999999999997643   355544

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.25  E-value=2.9e-12  Score=132.69  Aligned_cols=106  Identities=27%  Similarity=0.420  Sum_probs=87.3

Q ss_pred             HHHHHhhccccccceecccCceeEEEEEcCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceee
Q 013018          339 ETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKI  418 (451)
Q Consensus       339 ~~l~~~~~~~~~~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~  418 (451)
                      +.+++..++|...++||+|+||.||+|....+..||||++.... ...++|.+|+.+|++++|+||+++++++.. +..+
T Consensus       260 ~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~  337 (535)
T 2h8h_A          260 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIY  337 (535)
T ss_dssp             TCSBCCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCE
T ss_pred             cceecchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccce
Confidence            34456677888999999999999999998778889999997643 245789999999999999999999999865 6789


Q ss_pred             EEEeccCCCCHHHHHhccCCCCCCchhhh
Q 013018          419 LVYEFVPNKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       419 lv~ey~~~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                      |||||+++|+|.++|+.... ..++|.+.
T Consensus       338 lv~e~~~~gsL~~~l~~~~~-~~l~~~~~  365 (535)
T 2h8h_A          338 IVTEYMSKGSLLDFLKGETG-KYLRLPQL  365 (535)
T ss_dssp             EEECCCTTEEHHHHHSHHHH-TTCCHHHH
T ss_pred             EeeehhcCCcHHHHHhhcCC-CCCCHHHH
Confidence            99999999999999985321 23555443

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.25  E-value=9.8e-12  Score=122.42  Aligned_cols=103  Identities=30%  Similarity=0.542  Sum_probs=85.6

Q ss_pred             hccccccceecccCceeEEEEEcC------CCcEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCcee
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGVLP------SGQEIAVKRLSRS-SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEK  417 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~l~------~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~  417 (451)
                      .++|...+.||+|+||.||++.+.      .++.||||++... ..+....+.+|+.++.+++||||+++++++......
T Consensus        70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~  149 (367)
T 3l9p_A           70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR  149 (367)
T ss_dssp             GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence            456888999999999999999843      4568999999754 344556899999999999999999999999988899


Q ss_pred             eEEEeccCCCCHHHHHhccCCC----CCCchhhh
Q 013018          418 ILVYEFVPNKSLDYFLYAQSPK----NNNNWIGQ  447 (451)
Q Consensus       418 ~lv~ey~~~GsL~~~L~~~~~~----~~l~W~~r  447 (451)
                      ++||||+++|+|.++|+..+..    ..++|.+.
T Consensus       150 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~  183 (367)
T 3l9p_A          150 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL  183 (367)
T ss_dssp             EEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHH
T ss_pred             EEEEEeCCCCCHHHHHHhhccccCccccccHHHH
Confidence            9999999999999999975432    23666544

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.25  E-value=1.5e-11  Score=116.81  Aligned_cols=90  Identities=11%  Similarity=0.103  Sum_probs=79.4

Q ss_pred             ccccccceecccCceeEEEEEc-CCCcEEEEEEeccCC---hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEE
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSS---GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  421 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~  421 (451)
                      ++|...+.||+|+||.||++.. ..++.||||.+....   .+..+.|.+|+..+.+++||||+++++++...+..+|||
T Consensus        31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~  110 (286)
T 3uqc_A           31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA  110 (286)
T ss_dssp             TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence            4577889999999999999995 458999999997543   233478999999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhc
Q 013018          422 EFVPNKSLDYFLYA  435 (451)
Q Consensus       422 ey~~~GsL~~~L~~  435 (451)
                      ||+++++|.++|+.
T Consensus       111 e~~~g~~L~~~l~~  124 (286)
T 3uqc_A          111 EWIRGGSLQEVADT  124 (286)
T ss_dssp             ECCCEEEHHHHHTT
T ss_pred             EecCCCCHHHHHhc
Confidence            99999999999964

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.25  E-value=1.7e-11  Score=121.66  Aligned_cols=99  Identities=22%  Similarity=0.301  Sum_probs=85.5

Q ss_pred             ccccccceecccCceeEEEEEc-CCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEecc
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFV  424 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~  424 (451)
                      ++|...+.||+|+||.||++.. .+++.+|+|.+..........+.+|+.+|.+++||||+++++++......+|||||+
T Consensus        51 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~~  130 (387)
T 1kob_A           51 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFL  130 (387)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECC
T ss_pred             cceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEcC
Confidence            5688899999999999999984 578999999998766556678999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhccCCCCCCchhh
Q 013018          425 PNKSLDYFLYAQSPKNNNNWIG  446 (451)
Q Consensus       425 ~~GsL~~~L~~~~~~~~l~W~~  446 (451)
                      ++|+|.+++....  ..+++.+
T Consensus       131 ~gg~L~~~l~~~~--~~l~~~~  150 (387)
T 1kob_A          131 SGGELFDRIAAED--YKMSEAE  150 (387)
T ss_dssp             CCCBHHHHTTCTT--CCBCHHH
T ss_pred             CCCcHHHHHHhhc--CCCCHHH
Confidence            9999999998643  2355543

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.24  E-value=1.3e-11  Score=121.75  Aligned_cols=97  Identities=28%  Similarity=0.373  Sum_probs=78.2

Q ss_pred             cccceecccCceeEEEEE-cCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEeccCCC
Q 013018          349 STDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNK  427 (451)
Q Consensus       349 ~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~~~G  427 (451)
                      ...+.||+|+||.||++. ..+|+.||+|++........+++.+|+.++.+++||||+++++++...+..+|||||+++|
T Consensus        92 ~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~  171 (373)
T 2x4f_A           92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGG  171 (373)
T ss_dssp             EEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTC
T ss_pred             ecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCC
Confidence            345789999999999998 4578999999998776666788999999999999999999999999999999999999999


Q ss_pred             CHHHHHhccCCCCCCchhhh
Q 013018          428 SLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       428 sL~~~L~~~~~~~~l~W~~r  447 (451)
                      +|.+++....  ..++|..+
T Consensus       172 ~L~~~l~~~~--~~l~~~~~  189 (373)
T 2x4f_A          172 ELFDRIIDES--YNLTELDT  189 (373)
T ss_dssp             EEHHHHHHTG--GGCCHHHH
T ss_pred             cHHHHHHhcC--CCCCHHHH
Confidence            9999997533  23555443

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.24  E-value=1.5e-11  Score=118.68  Aligned_cols=100  Identities=23%  Similarity=0.306  Sum_probs=82.0

Q ss_pred             HhhccccccceecccCceeEEEEEcCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCc----eee
Q 013018          343 VATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGE----EKI  418 (451)
Q Consensus       343 ~~~~~~~~~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~----~~~  418 (451)
                      ...++|+..++||+|+||.||++.. .++.||||++.... .....+.+|+.++.+++||||+++++++....    ..+
T Consensus        21 ~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~   98 (322)
T 3soc_A           21 FQSMPLQLLEVKARGRFGCVWKAQL-LNEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLW   98 (322)
T ss_dssp             ETTEEEEEEEEEECSTTCEEEEEEE-TTEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEE
T ss_pred             cchhhchhhheecccCceEEEEEEE-CCCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEE
Confidence            3456788899999999999999997 47899999996543 23355677999999999999999999988743    469


Q ss_pred             EEEeccCCCCHHHHHhccCCCCCCchhhhh
Q 013018          419 LVYEFVPNKSLDYFLYAQSPKNNNNWIGQD  448 (451)
Q Consensus       419 lv~ey~~~GsL~~~L~~~~~~~~l~W~~r~  448 (451)
                      +|+||+++|+|.++|+...    ++|..+.
T Consensus        99 lv~e~~~~g~L~~~l~~~~----~~~~~~~  124 (322)
T 3soc_A           99 LITAFHEKGSLSDFLKANV----VSWNELC  124 (322)
T ss_dssp             EEEECCTTCBHHHHHHHCC----BCHHHHH
T ss_pred             EEEecCCCCCHHHHHHhcC----CCHHHHH
Confidence            9999999999999998643    6666543

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.23  E-value=2.3e-11  Score=116.80  Aligned_cols=105  Identities=26%  Similarity=0.293  Sum_probs=85.5

Q ss_pred             HhhccccccceecccCceeEEEEE-cCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEe----Ccee
Q 013018          343 VATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLE----GEEK  417 (451)
Q Consensus       343 ~~~~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~----~~~~  417 (451)
                      +..++|...+.||+|+||.||++. ..+++.||||++........+.+.+|+.++.+++||||+++++++..    ....
T Consensus        26 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~  105 (317)
T 2buj_A           26 IDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEA  105 (317)
T ss_dssp             ETTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEE
T ss_pred             ECCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCcee
Confidence            345678899999999999999999 46789999999977666667889999999999999999999999873    3478


Q ss_pred             eEEEeccCCCCHHHHHhccC-CCCCCchhhh
Q 013018          418 ILVYEFVPNKSLDYFLYAQS-PKNNNNWIGQ  447 (451)
Q Consensus       418 ~lv~ey~~~GsL~~~L~~~~-~~~~l~W~~r  447 (451)
                      ++|+||+++|+|.+++.... .+..++|.+.
T Consensus       106 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~  136 (317)
T 2buj_A          106 WLLLPFFKRGTLWNEIERLKDKGNFLTEDQI  136 (317)
T ss_dssp             EEEEECCTTCBHHHHHHHHHTTTCCCCHHHH
T ss_pred             EEEEEeCCCCcHHHHHHHHHhcCCCCCHHHH
Confidence            89999999999999998632 2344666554

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.23  E-value=8.2e-12  Score=116.76  Aligned_cols=101  Identities=27%  Similarity=0.391  Sum_probs=85.9

Q ss_pred             hhccccccceecccCceeEEEEEcCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEec
Q 013018          344 ATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  423 (451)
Q Consensus       344 ~~~~~~~~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey  423 (451)
                      ..++|...+.||+|+||.||++...+++.||+|.+..... ..+++.+|+.++.+++||||+++++++...+..++|+||
T Consensus         6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   84 (267)
T 3t9t_A            6 DPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEF   84 (267)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECC
T ss_pred             chhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeC
Confidence            3457888899999999999999987888999999976532 346899999999999999999999999988899999999


Q ss_pred             cCCCCHHHHHhccCCCCCCchhhh
Q 013018          424 VPNKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       424 ~~~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                      +++|+|.++++....  .++|.+.
T Consensus        85 ~~~~~L~~~~~~~~~--~~~~~~~  106 (267)
T 3t9t_A           85 MEHGCLSDYLRTQRG--LFAAETL  106 (267)
T ss_dssp             CTTCBHHHHHHHTTT--CCCHHHH
T ss_pred             CCCCcHHHHHhhCcc--cCCHHHH
Confidence            999999999986432  3455443

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.23  E-value=9e-12  Score=117.94  Aligned_cols=106  Identities=28%  Similarity=0.463  Sum_probs=88.4

Q ss_pred             HHHHhhccccccceecccCceeEEEEEc-CCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceee
Q 013018          340 TIEVATNNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKI  418 (451)
Q Consensus       340 ~l~~~~~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~  418 (451)
                      +++...++|...+.||+|+||.||++.. ..+..||+|.+.... ...+.+.+|+.++.+++||||+++++++...+..+
T Consensus         7 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   85 (288)
T 3kfa_A            7 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY   85 (288)
T ss_dssp             TTBCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEE
T ss_pred             cccccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEE
Confidence            3445567788899999999999999995 458899999997543 34578999999999999999999999999888999


Q ss_pred             EEEeccCCCCHHHHHhccCCCCCCchhhh
Q 013018          419 LVYEFVPNKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       419 lv~ey~~~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                      +|+||+++|+|.++++.... ..++|..+
T Consensus        86 ~v~e~~~~~~L~~~~~~~~~-~~~~~~~~  113 (288)
T 3kfa_A           86 IITEFMTYGNLLDYLRECNR-QEVSAVVL  113 (288)
T ss_dssp             EEEECCTTEEHHHHHHHCCT-TTSCHHHH
T ss_pred             EEEEcCCCCcHHHHHHhccc-CCccHhHH
Confidence            99999999999999986432 34666544

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.23  E-value=1e-11  Score=118.98  Aligned_cols=95  Identities=26%  Similarity=0.431  Sum_probs=82.3

Q ss_pred             HhhccccccceecccCceeEEEEEc------CCCcEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCc
Q 013018          343 VATNNFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRLSRS-SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGE  415 (451)
Q Consensus       343 ~~~~~~~~~~~lG~G~fg~V~~~~l------~~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~  415 (451)
                      ...++|...+.||+|+||.||++..      .++..||||.+... .....+.+.+|+.++.+++||||+++++++...+
T Consensus        20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~   99 (314)
T 2ivs_A           20 FPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDG   99 (314)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS
T ss_pred             cchhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCC
Confidence            3456788899999999999999984      24578999999754 3344578999999999999999999999999888


Q ss_pred             eeeEEEeccCCCCHHHHHhccC
Q 013018          416 EKILVYEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       416 ~~~lv~ey~~~GsL~~~L~~~~  437 (451)
                      ..++|+||+++|+|.++++...
T Consensus       100 ~~~lv~e~~~~~~L~~~l~~~~  121 (314)
T 2ivs_A          100 PLLLIVEYAKYGSLRGFLRESR  121 (314)
T ss_dssp             SCEEEEECCTTCBHHHHHHHTT
T ss_pred             ceEEEEeecCCCCHHHHHHHHh
Confidence            9999999999999999999754

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.23  E-value=2.8e-11  Score=118.99  Aligned_cols=93  Identities=30%  Similarity=0.417  Sum_probs=81.5

Q ss_pred             hccccccceecccCceeEEEEE-cCCCcEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEE
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRS--SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  421 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~  421 (451)
                      .++|...+.||+|+||.||++. ..+++.||+|.+...  .....+.+.+|+.++.+++||||+++++++...+..++|+
T Consensus        28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~  107 (362)
T 2bdw_A           28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF  107 (362)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            4568889999999999999998 456899999999754  3334577999999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhccC
Q 013018          422 EFVPNKSLDYFLYAQS  437 (451)
Q Consensus       422 ey~~~GsL~~~L~~~~  437 (451)
                      ||+++|+|.+++....
T Consensus       108 e~~~gg~L~~~l~~~~  123 (362)
T 2bdw_A          108 DLVTGGELFEDIVARE  123 (362)
T ss_dssp             CCCCSCBHHHHHTTCS
T ss_pred             ecCCCCCHHHHHHHcC
Confidence            9999999999998643

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.23  E-value=1.7e-11  Score=121.96  Aligned_cols=102  Identities=25%  Similarity=0.304  Sum_probs=85.0

Q ss_pred             ccccccceecccCceeEEEEEc-CCCcEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCc--eeeEEE
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSS-GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGE--EKILVY  421 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~--~~~lv~  421 (451)
                      ++|...++||+|+||.||++.. .+++.||||.+.... ....+.+.+|+.++.+++||||+++++++....  ..+|||
T Consensus         9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~   88 (396)
T 4eut_A            9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM   88 (396)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred             CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEE
Confidence            4678899999999999999995 458999999997543 234577899999999999999999999988754  679999


Q ss_pred             eccCCCCHHHHHhccCCCCCCchhhh
Q 013018          422 EFVPNKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       422 ey~~~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                      ||+++|+|.++++.......+++...
T Consensus        89 e~~~~g~L~~~l~~~~~~~~l~~~~~  114 (396)
T 4eut_A           89 EFCPCGSLYTVLEEPSNAYGLPESEF  114 (396)
T ss_dssp             CCCTTEEHHHHTTSGGGTTCCCHHHH
T ss_pred             ecCCCCCHHHHHHhhhcccCCCHHHH
Confidence            99999999999997655444666544

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.23  E-value=3.4e-11  Score=119.34  Aligned_cols=101  Identities=16%  Similarity=0.226  Sum_probs=85.0

Q ss_pred             hccccccceeccc--CceeEEEEEc-CCCcEEEEEEeccCC--hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeE
Q 013018          345 TNNFSTDNKLGEG--GFGEVYKGVL-PSGQEIAVKRLSRSS--GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKIL  419 (451)
Q Consensus       345 ~~~~~~~~~lG~G--~fg~V~~~~l-~~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l  419 (451)
                      .++|...++||+|  +||.||++.. .+++.||||++....  .+..+.+.+|+.++++++||||+++++++...+..+|
T Consensus        24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l  103 (389)
T 3gni_B           24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV  103 (389)
T ss_dssp             GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred             CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence            4568889999999  9999999994 479999999997542  3345678899999999999999999999999999999


Q ss_pred             EEeccCCCCHHHHHhccCCCCCCchhh
Q 013018          420 VYEFVPNKSLDYFLYAQSPKNNNNWIG  446 (451)
Q Consensus       420 v~ey~~~GsL~~~L~~~~~~~~l~W~~  446 (451)
                      |+||+++|+|.+++..... ..+++..
T Consensus       104 v~e~~~~~~L~~~l~~~~~-~~~~~~~  129 (389)
T 3gni_B          104 VTSFMAYGSAKDLICTHFM-DGMNELA  129 (389)
T ss_dssp             EEECCTTCBHHHHHHHTCT-TCCCHHH
T ss_pred             EEEccCCCCHHHHHhhhcc-cCCCHHH
Confidence            9999999999999987532 2255443

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.23  E-value=1.1e-11  Score=120.63  Aligned_cols=99  Identities=25%  Similarity=0.433  Sum_probs=82.6

Q ss_pred             HHHHhhccccccceecccCceeEEEEEc------CCCcEEEEEEeccCC-hhhHHHHHHHHHHHhcC-CCCCcccceeEE
Q 013018          340 TIEVATNNFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRLSRSS-GQGGQEFKNEVVLVAKL-QHRNLVRLLGFC  411 (451)
Q Consensus       340 ~l~~~~~~~~~~~~lG~G~fg~V~~~~l------~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~g~~  411 (451)
                      +++...++|...+.||+|+||.||++..      ..+..||||.+.... ....+.+.+|+.++.++ +||||+++++++
T Consensus        39 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~  118 (344)
T 1rjb_A           39 KWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGAC  118 (344)
T ss_dssp             GGBCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             CcccCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence            3455677899999999999999999984      245689999997542 23347899999999999 899999999999


Q ss_pred             EeCceeeEEEeccCCCCHHHHHhccCC
Q 013018          412 LEGEEKILVYEFVPNKSLDYFLYAQSP  438 (451)
Q Consensus       412 ~~~~~~~lv~ey~~~GsL~~~L~~~~~  438 (451)
                      ...+..+|||||+++|+|.++|.....
T Consensus       119 ~~~~~~~lv~e~~~~g~L~~~l~~~~~  145 (344)
T 1rjb_A          119 TLSGPIYLIFEYCCYGDLLNYLRSKRE  145 (344)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHTTTT
T ss_pred             eeCCccEEEEecCCCCcHHHHHhhccc
Confidence            998999999999999999999997543

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.22  E-value=1.2e-11  Score=122.43  Aligned_cols=95  Identities=23%  Similarity=0.444  Sum_probs=81.6

Q ss_pred             HhhccccccceecccCceeEEEEEc--------CCCcEEEEEEeccCC-hhhHHHHHHHHHHHhcC-CCCCcccceeEEE
Q 013018          343 VATNNFSTDNKLGEGGFGEVYKGVL--------PSGQEIAVKRLSRSS-GQGGQEFKNEVVLVAKL-QHRNLVRLLGFCL  412 (451)
Q Consensus       343 ~~~~~~~~~~~lG~G~fg~V~~~~l--------~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~  412 (451)
                      ...++|...+.||+|+||.||++..        ..+..||||++.... ....+.+.+|++++.++ +||||+++++++.
T Consensus        66 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~  145 (382)
T 3tt0_A           66 LPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACT  145 (382)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             cchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeec
Confidence            3456788899999999999999984        223579999997653 34457899999999999 8999999999999


Q ss_pred             eCceeeEEEeccCCCCHHHHHhccC
Q 013018          413 EGEEKILVYEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       413 ~~~~~~lv~ey~~~GsL~~~L~~~~  437 (451)
                      ..+..++|+||+++|+|.++|....
T Consensus       146 ~~~~~~lv~e~~~~g~L~~~l~~~~  170 (382)
T 3tt0_A          146 QDGPLYVIVEYASKGNLREYLQARR  170 (382)
T ss_dssp             SSSSCEEEEECCTTCBHHHHHHHTC
T ss_pred             cCCceEEEEEecCCCcHHHHHHHhc
Confidence            9999999999999999999999755

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.22  E-value=5.9e-12  Score=125.86  Aligned_cols=100  Identities=19%  Similarity=0.216  Sum_probs=85.3

Q ss_pred             ChHHHHHhhccccccceecccCceeEEEEEc-CCCcEEEEEEeccCC---hhhHHHHHHHHHHHhcCCCCCcccceeEEE
Q 013018          337 DFETIEVATNNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSS---GQGGQEFKNEVVLVAKLQHRNLVRLLGFCL  412 (451)
Q Consensus       337 ~~~~l~~~~~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~  412 (451)
                      .+++++...++|...++||+|+||.||++.. .+|+.||||++....   ....+.+.+|..++.+++||||+++++++.
T Consensus        52 ~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~  131 (412)
T 2vd5_A           52 RLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQ  131 (412)
T ss_dssp             HHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred             hhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEe
Confidence            3455556678899999999999999999995 578999999996432   122345889999999999999999999999


Q ss_pred             eCceeeEEEeccCCCCHHHHHhcc
Q 013018          413 EGEEKILVYEFVPNKSLDYFLYAQ  436 (451)
Q Consensus       413 ~~~~~~lv~ey~~~GsL~~~L~~~  436 (451)
                      ..+..+|||||+++|+|.++|+..
T Consensus       132 ~~~~~~lVmE~~~gg~L~~~l~~~  155 (412)
T 2vd5_A          132 DENYLYLVMEYYVGGDLLTLLSKF  155 (412)
T ss_dssp             CSSEEEEEECCCCSCBHHHHHHHH
T ss_pred             eCCEEEEEEcCCCCCcHHHHHHhc
Confidence            999999999999999999999864

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.22  E-value=1.2e-11  Score=120.02  Aligned_cols=95  Identities=23%  Similarity=0.457  Sum_probs=81.3

Q ss_pred             HhhccccccceecccCceeEEEEEc--------CCCcEEEEEEeccCC-hhhHHHHHHHHHHHhcC-CCCCcccceeEEE
Q 013018          343 VATNNFSTDNKLGEGGFGEVYKGVL--------PSGQEIAVKRLSRSS-GQGGQEFKNEVVLVAKL-QHRNLVRLLGFCL  412 (451)
Q Consensus       343 ~~~~~~~~~~~lG~G~fg~V~~~~l--------~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~  412 (451)
                      ...++|...+.||+|+||.||++..        .++..||||++.... ....+.+.+|+.++.++ +||||+++++++.
T Consensus        32 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~  111 (334)
T 2pvf_A           32 FPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT  111 (334)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             CCHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEc
Confidence            4557788899999999999999985        346789999997553 34457899999999999 8999999999999


Q ss_pred             eCceeeEEEeccCCCCHHHHHhccC
Q 013018          413 EGEEKILVYEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       413 ~~~~~~lv~ey~~~GsL~~~L~~~~  437 (451)
                      ..+..++|+||+++|+|.++++...
T Consensus       112 ~~~~~~lv~e~~~~~~L~~~l~~~~  136 (334)
T 2pvf_A          112 QDGPLYVIVEYASKGNLREYLRARR  136 (334)
T ss_dssp             SSSCCEEEEECCTTCBHHHHHHTTS
T ss_pred             cCCceEEEEECCCCCcHHHHHHHhc
Confidence            9899999999999999999999754

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.22  E-value=1.1e-11  Score=118.61  Aligned_cols=96  Identities=29%  Similarity=0.458  Sum_probs=83.1

Q ss_pred             HHhhccccccceecccCceeEEEEEc------CCCcEEEEEEeccCCh-hhHHHHHHHHHHHhcC-CCCCcccceeEEEe
Q 013018          342 EVATNNFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRLSRSSG-QGGQEFKNEVVLVAKL-QHRNLVRLLGFCLE  413 (451)
Q Consensus       342 ~~~~~~~~~~~~lG~G~fg~V~~~~l------~~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~  413 (451)
                      +...++|...+.||+|+||.||++..      ..++.||||.+..... ...+.+.+|+.++.++ +||||+++++++..
T Consensus        19 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~   98 (313)
T 1t46_A           19 EFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTI   98 (313)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             ccChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEec
Confidence            34566788899999999999999984      3467899999975533 3457899999999999 89999999999999


Q ss_pred             CceeeEEEeccCCCCHHHHHhccC
Q 013018          414 GEEKILVYEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       414 ~~~~~lv~ey~~~GsL~~~L~~~~  437 (451)
                      .+..++|+||+++|+|.++++...
T Consensus        99 ~~~~~lv~e~~~~~~L~~~l~~~~  122 (313)
T 1t46_A           99 GGPTLVITEYCCYGDLLNFLRRKR  122 (313)
T ss_dssp             SSSCEEEEECCTTEEHHHHHHHTT
T ss_pred             CCCcEEEEecCCCCCHHHHHHhcc
Confidence            999999999999999999999754

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.22  E-value=1e-11  Score=119.74  Aligned_cols=108  Identities=24%  Similarity=0.397  Sum_probs=78.4

Q ss_pred             HHHHhhccccccceecccCceeEEEEEcCC-C---cEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCcccceeEEEe
Q 013018          340 TIEVATNNFSTDNKLGEGGFGEVYKGVLPS-G---QEIAVKRLSRS--SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLE  413 (451)
Q Consensus       340 ~l~~~~~~~~~~~~lG~G~fg~V~~~~l~~-g---~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~  413 (451)
                      ++....++|...+.||+|+||.||++.... +   ..||||.+...  .....+.+.+|+.++++++||||+++++++..
T Consensus        17 ~~~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~   96 (323)
T 3qup_A           17 DVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLR   96 (323)
T ss_dssp             TTBCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEEC
T ss_pred             hcccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeec
Confidence            344556778999999999999999999543 3   27999999754  33446789999999999999999999999987


Q ss_pred             Ccee------eEEEeccCCCCHHHHHhccCCC---CCCchhhh
Q 013018          414 GEEK------ILVYEFVPNKSLDYFLYAQSPK---NNNNWIGQ  447 (451)
Q Consensus       414 ~~~~------~lv~ey~~~GsL~~~L~~~~~~---~~l~W~~r  447 (451)
                      ....      ++|+||+++|+|.+++......   ..++|.++
T Consensus        97 ~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~  139 (323)
T 3qup_A           97 SRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTL  139 (323)
T ss_dssp             C-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHH
T ss_pred             cccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHH
Confidence            6554      8999999999999999864321   13555544

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.22  E-value=1.4e-11  Score=118.08  Aligned_cols=97  Identities=25%  Similarity=0.423  Sum_probs=80.7

Q ss_pred             hccccccceecccCceeEEEEEcCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEecc
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFV  424 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~  424 (451)
                      .++|+..+.||+|+||.||++.. .++.||||.+...  ...+.|.+|+.++++++||||++++|++.  +..++||||+
T Consensus         7 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~~   81 (307)
T 2eva_A            7 YKEIEVEEVVGRGAFGVVCKAKW-RAKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYA   81 (307)
T ss_dssp             GGGEEEEEEEECCSSSEEEEEEE-TTEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEECC
T ss_pred             HhHeeeeeEeecCCCceEEEEEE-CCeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEcC
Confidence            34677889999999999999998 5788999998643  34578999999999999999999999876  4588999999


Q ss_pred             CCCCHHHHHhccCCCCCCchhh
Q 013018          425 PNKSLDYFLYAQSPKNNNNWIG  446 (451)
Q Consensus       425 ~~GsL~~~L~~~~~~~~l~W~~  446 (451)
                      ++|+|.++++.......+++..
T Consensus        82 ~~~~L~~~l~~~~~~~~~~~~~  103 (307)
T 2eva_A           82 EGGSLYNVLHGAEPLPYYTAAH  103 (307)
T ss_dssp             TTCBHHHHHHCSSSEECCCHHH
T ss_pred             CCCCHHHHHhccCCCCccCHHH
Confidence            9999999999765443445543

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.22  E-value=4.4e-11  Score=114.83  Aligned_cols=91  Identities=26%  Similarity=0.373  Sum_probs=79.7

Q ss_pred             cccc-cceecccCceeEEEEE-cCCCcEEEEEEeccCChhhHHHHHHHHHHHhcC-CCCCcccceeEEEeCceeeEEEec
Q 013018          347 NFST-DNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKILVYEF  423 (451)
Q Consensus       347 ~~~~-~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lv~ey  423 (451)
                      .|.. .+.||+|+||.||++. ..+++.||||++........+.+.+|+.++.++ +||||+++++++...+..++||||
T Consensus        13 ~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~   92 (316)
T 2ac3_A           13 VYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEK   92 (316)
T ss_dssp             SCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             eEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEc
Confidence            4555 3789999999999999 557899999999776555667899999999985 799999999999999999999999


Q ss_pred             cCCCCHHHHHhccC
Q 013018          424 VPNKSLDYFLYAQS  437 (451)
Q Consensus       424 ~~~GsL~~~L~~~~  437 (451)
                      +++|+|.+++....
T Consensus        93 ~~~~~L~~~l~~~~  106 (316)
T 2ac3_A           93 MRGGSILSHIHKRR  106 (316)
T ss_dssp             CTTCBHHHHHHHHS
T ss_pred             CCCCcHHHHHhccC
Confidence            99999999998753

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.22  E-value=2.9e-11  Score=116.80  Aligned_cols=101  Identities=24%  Similarity=0.365  Sum_probs=84.7

Q ss_pred             hccccccceecccCceeEEEEEc-----CCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEe--Ccee
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGVL-----PSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLE--GEEK  417 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~l-----~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~--~~~~  417 (451)
                      .++|+..+.||+|+||.||++.+     ..++.||||++........+.+.+|+.++.+++||||+++++++..  ....
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~  101 (327)
T 3lxl_A           22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSL  101 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEE
T ss_pred             hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceE
Confidence            35678899999999999999983     4678999999987766666789999999999999999999999874  4568


Q ss_pred             eEEEeccCCCCHHHHHhccCCCCCCchhhh
Q 013018          418 ILVYEFVPNKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       418 ~lv~ey~~~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                      ++|+||+++|+|.+++...+.  .++|.++
T Consensus       102 ~lv~e~~~~~~L~~~l~~~~~--~~~~~~~  129 (327)
T 3lxl_A          102 RLVMEYLPSGCLRDFLQRHRA--RLDASRL  129 (327)
T ss_dssp             EEEEECCTTCBHHHHHHHHGG--GCCHHHH
T ss_pred             EEEEeecCCCCHHHHHHhccc--CCCHHHH
Confidence            899999999999999986432  3555544

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.22  E-value=5.5e-12  Score=121.52  Aligned_cols=99  Identities=27%  Similarity=0.516  Sum_probs=84.8

Q ss_pred             hHHHHHhhccccccceecccCceeEEEEEcC------CCcEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCcccceeE
Q 013018          338 FETIEVATNNFSTDNKLGEGGFGEVYKGVLP------SGQEIAVKRLSRSS-GQGGQEFKNEVVLVAKLQHRNLVRLLGF  410 (451)
Q Consensus       338 ~~~l~~~~~~~~~~~~lG~G~fg~V~~~~l~------~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~  410 (451)
                      .++++...++|...+.||+|+||.||+|...      .+..||||.+.... ......+.+|+.++++++||||++++++
T Consensus        17 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~   96 (322)
T 1p4o_A           17 PDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGV   96 (322)
T ss_dssp             CCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEE
T ss_pred             hhhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEE
Confidence            3455566778999999999999999999853      36789999997543 3445679999999999999999999999


Q ss_pred             EEeCceeeEEEeccCCCCHHHHHhcc
Q 013018          411 CLEGEEKILVYEFVPNKSLDYFLYAQ  436 (451)
Q Consensus       411 ~~~~~~~~lv~ey~~~GsL~~~L~~~  436 (451)
                      +...+..++|+||+++|+|.++++..
T Consensus        97 ~~~~~~~~lv~e~~~~~~L~~~l~~~  122 (322)
T 1p4o_A           97 VSQGQPTLVIMELMTRGDLKSYLRSL  122 (322)
T ss_dssp             ECSSSSCEEEEECCTTCBHHHHHHHH
T ss_pred             EccCCccEEEEEeCCCCcHHHHHHHh
Confidence            99888999999999999999999863

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.22  E-value=7.4e-12  Score=125.08  Aligned_cols=99  Identities=19%  Similarity=0.243  Sum_probs=83.9

Q ss_pred             hHHHHHhhccccccceecccCceeEEEEEc-CCCcEEEEEEeccCC---hhhHHHHHHHHHHHhcCCCCCcccceeEEEe
Q 013018          338 FETIEVATNNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSS---GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLE  413 (451)
Q Consensus       338 ~~~l~~~~~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~  413 (451)
                      ..+++...++|...++||+|+||.||++.. .+++.+|+|++....   ....+.+.+|+.++..++||||+++++++..
T Consensus        61 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~  140 (410)
T 3v8s_A           61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD  140 (410)
T ss_dssp             HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred             HHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE
Confidence            345556678899999999999999999994 468899999996431   1122458899999999999999999999999


Q ss_pred             CceeeEEEeccCCCCHHHHHhcc
Q 013018          414 GEEKILVYEFVPNKSLDYFLYAQ  436 (451)
Q Consensus       414 ~~~~~lv~ey~~~GsL~~~L~~~  436 (451)
                      .+..+|||||+++|+|.++|+..
T Consensus       141 ~~~~~lV~E~~~gg~L~~~l~~~  163 (410)
T 3v8s_A          141 DRYLYMVMEYMPGGDLVNLMSNY  163 (410)
T ss_dssp             SSEEEEEECCCTTEEHHHHHHHC
T ss_pred             CCEEEEEEeCCCCCcHHHHHHcC
Confidence            99999999999999999999864

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.22  E-value=2.5e-11  Score=118.15  Aligned_cols=93  Identities=22%  Similarity=0.231  Sum_probs=81.2

Q ss_pred             hccccccceecccCceeEEEEEc-CCCcEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEE
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRS---SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILV  420 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv  420 (451)
                      .++|...+.||+|+||.||++.. .+|+.||+|.+...   .....+.+.+|+.++.+++||||+++++++...+..++|
T Consensus         4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv   83 (337)
T 1o6l_A            4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV   83 (337)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence            35688899999999999999994 57899999999653   223456789999999999999999999999999999999


Q ss_pred             EeccCCCCHHHHHhccC
Q 013018          421 YEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       421 ~ey~~~GsL~~~L~~~~  437 (451)
                      |||+++|+|.++|...+
T Consensus        84 ~E~~~gg~L~~~l~~~~  100 (337)
T 1o6l_A           84 MEYANGGELFFHLSRER  100 (337)
T ss_dssp             EECCTTCBHHHHHHHHS
T ss_pred             EeCCCCCcHHHHHHhcC
Confidence            99999999999998643

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.22  E-value=1.9e-11  Score=118.87  Aligned_cols=96  Identities=22%  Similarity=0.300  Sum_probs=82.6

Q ss_pred             HHHHhhccccccceecccCceeEEEEEc-CCCcEEEEEEeccC-----ChhhHHHHHHHHHHHhcCCCCCcccceeEEEe
Q 013018          340 TIEVATNNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRS-----SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLE  413 (451)
Q Consensus       340 ~l~~~~~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~-----~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~  413 (451)
                      ++....++|...+.||+|+||.||++.. .++..||+|.+...     .....+.+.+|+.++.+++||||+++++++..
T Consensus        20 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~   99 (345)
T 3hko_A           20 SLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYED   99 (345)
T ss_dssp             CHHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred             hhhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhcc
Confidence            3445567789999999999999999984 57889999998643     23445789999999999999999999999999


Q ss_pred             CceeeEEEeccCCCCHHHHHhc
Q 013018          414 GEEKILVYEFVPNKSLDYFLYA  435 (451)
Q Consensus       414 ~~~~~lv~ey~~~GsL~~~L~~  435 (451)
                      .+..+|||||+++|+|.++|..
T Consensus       100 ~~~~~lv~e~~~gg~L~~~l~~  121 (345)
T 3hko_A          100 EQYICLVMELCHGGHLLDKLNV  121 (345)
T ss_dssp             SSEEEEEEECCCSCBHHHHEEE
T ss_pred             CCeEEEEEeCCCCCcHHHHHHH
Confidence            9999999999999999999963

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.22  E-value=3.1e-11  Score=116.60  Aligned_cols=91  Identities=21%  Similarity=0.305  Sum_probs=80.2

Q ss_pred             hccccccceecccCceeEEEEE-cCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEec
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  423 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey  423 (451)
                      .++|...+.||+|+||.||++. ..+++.+|+|.+.... .....+.+|+.++..++||||+++++++...+..++||||
T Consensus         4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~   82 (321)
T 1tki_A            4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF   82 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence            3568888999999999999999 4568899999987543 3446789999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcc
Q 013018          424 VPNKSLDYFLYAQ  436 (451)
Q Consensus       424 ~~~GsL~~~L~~~  436 (451)
                      +++|+|.+++...
T Consensus        83 ~~g~~L~~~l~~~   95 (321)
T 1tki_A           83 ISGLDIFERINTS   95 (321)
T ss_dssp             CCCCBHHHHHTSS
T ss_pred             CCCCCHHHHHHhc
Confidence            9999999999764

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.21  E-value=3.5e-11  Score=118.20  Aligned_cols=92  Identities=18%  Similarity=0.281  Sum_probs=80.7

Q ss_pred             hccccccceecccCceeEEEEEc-CCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEec
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  423 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey  423 (451)
                      .++|...+.||+|+||.||++.. .+++.||||.+..... ..+.+.+|+.++++++||||+++++++...+..++|+||
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~   97 (361)
T 3uc3_A           19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEY   97 (361)
T ss_dssp             TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEe
Confidence            45688899999999999999994 4789999999975432 236788999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhccC
Q 013018          424 VPNKSLDYFLYAQS  437 (451)
Q Consensus       424 ~~~GsL~~~L~~~~  437 (451)
                      +++|+|.+++....
T Consensus        98 ~~~~~L~~~l~~~~  111 (361)
T 3uc3_A           98 ASGGELYERICNAG  111 (361)
T ss_dssp             CCSCBHHHHHHHHS
T ss_pred             CCCCCHHHHHHhcC
Confidence            99999999997644

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.21  E-value=1.5e-11  Score=118.82  Aligned_cols=91  Identities=25%  Similarity=0.390  Sum_probs=77.6

Q ss_pred             ccccccceecccCceeEEEEEc-CCCcEEEEEEeccCCh-hhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEec
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSG-QGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  423 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey  423 (451)
                      ++|...+.||+|+||.||++.. .+++.||||.+..... ...+.+.+|+.++.+++||||+++++++...+..+|||||
T Consensus         7 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~   86 (323)
T 3tki_A            7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY   86 (323)
T ss_dssp             TCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             hhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEc
Confidence            5688899999999999999984 4789999999965432 2346789999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcc
Q 013018          424 VPNKSLDYFLYAQ  436 (451)
Q Consensus       424 ~~~GsL~~~L~~~  436 (451)
                      +++|+|.+++...
T Consensus        87 ~~~~~L~~~l~~~   99 (323)
T 3tki_A           87 CSGGELFDRIEPD   99 (323)
T ss_dssp             CTTEEGGGGSBTT
T ss_pred             CCCCcHHHHHhhc
Confidence            9999999998754

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.21  E-value=2.3e-11  Score=118.93  Aligned_cols=91  Identities=23%  Similarity=0.391  Sum_probs=79.4

Q ss_pred             ccccccceecccCceeEEEEE-cCCCcEEEEEEeccCC-----hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeE
Q 013018          346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSS-----GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKIL  419 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l  419 (451)
                      +.|...+.||+|+||.||++. ..+++.||||.+....     ....+.+.+|+.++.+++||||+++++++...+..+|
T Consensus        24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l  103 (351)
T 3c0i_A           24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYM  103 (351)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred             cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence            457888999999999999998 4578999999986321     1235789999999999999999999999999999999


Q ss_pred             EEeccCCCCHHHHHhcc
Q 013018          420 VYEFVPNKSLDYFLYAQ  436 (451)
Q Consensus       420 v~ey~~~GsL~~~L~~~  436 (451)
                      ||||+++|+|.+++...
T Consensus       104 v~e~~~g~~L~~~l~~~  120 (351)
T 3c0i_A          104 VFEFMDGADLCFEIVKR  120 (351)
T ss_dssp             EEECCSSCBHHHHHHHH
T ss_pred             EEeCCCCCCHHHHHHHh
Confidence            99999999999888754

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.21  E-value=2.4e-11  Score=114.55  Aligned_cols=103  Identities=26%  Similarity=0.294  Sum_probs=85.2

Q ss_pred             hccccccceecccCceeEEEEEc-CCCcEEEEEEeccC--ChhhHHHHHHHHHHHhcC-CCCCcccceeEEEeCceeeEE
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRS--SGQGGQEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKILV  420 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lv  420 (451)
                      .++|...+.||+|+||.||++.. .+++.||||.+...  ......++.+|+..+.++ +||||+++++++...+..++|
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv   89 (289)
T 1x8b_A           10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ   89 (289)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred             cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence            35688899999999999999995 47899999999754  233457889999999999 999999999999999999999


Q ss_pred             EeccCCCCHHHHHhccCC-CCCCchhhh
Q 013018          421 YEFVPNKSLDYFLYAQSP-KNNNNWIGQ  447 (451)
Q Consensus       421 ~ey~~~GsL~~~L~~~~~-~~~l~W~~r  447 (451)
                      +||+++|+|.+++..... ...+++.+.
T Consensus        90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~  117 (289)
T 1x8b_A           90 NEYCNGGSLADAISENYRIMSYFKEAEL  117 (289)
T ss_dssp             EECCTTCBHHHHHHHHHHHTCCCCHHHH
T ss_pred             EEecCCCcHHHHHHhhcccccCCCHHHH
Confidence            999999999999986432 133555443

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.20  E-value=2.5e-11  Score=114.92  Aligned_cols=101  Identities=19%  Similarity=0.224  Sum_probs=84.0

Q ss_pred             ccccccceecccCceeEEEEE-cCCCcEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEec
Q 013018          346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSS-GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  423 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey  423 (451)
                      ++|...+.||+|+||.||++. ..++..+++|.+.... ....+.+.+|+.++.+++||||+++++++...+..++|+||
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~  101 (285)
T 3is5_A           22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMET  101 (285)
T ss_dssp             HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEe
Confidence            457888999999999999999 4578999999987543 33457899999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhccC-CCCCCchhh
Q 013018          424 VPNKSLDYFLYAQS-PKNNNNWIG  446 (451)
Q Consensus       424 ~~~GsL~~~L~~~~-~~~~l~W~~  446 (451)
                      +++|+|.+++.... ....+++..
T Consensus       102 ~~~~~L~~~l~~~~~~~~~~~~~~  125 (285)
T 3is5_A          102 CEGGELLERIVSAQARGKALSEGY  125 (285)
T ss_dssp             CSCCBHHHHHHHHHHHTCCCCHHH
T ss_pred             CCCCcHHHHHHhhhhcccCCCHHH
Confidence            99999999997542 123355543

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.20  E-value=4.4e-11  Score=112.83  Aligned_cols=99  Identities=22%  Similarity=0.323  Sum_probs=83.3

Q ss_pred             ccccccceecccCceeEEEEEc-CCCcEEEEEEeccCCh------hhHHHHHHHHHHHhcCCCCCcccceeEEEeCceee
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSG------QGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKI  418 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~  418 (451)
                      ++|...+.||+|+||.||++.. .+++.+|+|.+.....      ...+.+.+|+.++.+++||||+++++++......+
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   84 (283)
T 3bhy_A            5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV   84 (283)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence            4578889999999999999995 4689999999865421      13578999999999999999999999999999999


Q ss_pred             EEEeccCCCCHHHHHhccCCCCCCchhhh
Q 013018          419 LVYEFVPNKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       419 lv~ey~~~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                      +|+||+++++|.+++....   .++|.+.
T Consensus        85 lv~e~~~~~~L~~~l~~~~---~~~~~~~  110 (283)
T 3bhy_A           85 LILELVSGGELFDFLAEKE---SLTEDEA  110 (283)
T ss_dssp             EEEECCCSCBHHHHHHHHS---SCCHHHH
T ss_pred             EEEeecCCCcHHHHHHhcC---CCCHHHH
Confidence            9999999999999998643   2555443

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.20  E-value=4.1e-11  Score=115.77  Aligned_cols=102  Identities=27%  Similarity=0.465  Sum_probs=84.2

Q ss_pred             hccccccceecccCceeEEEEEc-----CCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCc--ee
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGVL-----PSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGE--EK  417 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~l-----~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~--~~  417 (451)
                      .++|...+.||+|+||.||++.+     .+++.||||.+........+.+.+|+.++.+++||||+++++++...+  ..
T Consensus        40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~  119 (326)
T 2w1i_A           40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL  119 (326)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CC
T ss_pred             HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCce
Confidence            34578889999999999999983     468899999998766666688999999999999999999999987643  68


Q ss_pred             eEEEeccCCCCHHHHHhccCCCCCCchhhhh
Q 013018          418 ILVYEFVPNKSLDYFLYAQSPKNNNNWIGQD  448 (451)
Q Consensus       418 ~lv~ey~~~GsL~~~L~~~~~~~~l~W~~r~  448 (451)
                      ++|+||+++|+|.+++.....  .++|.+.+
T Consensus       120 ~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~  148 (326)
T 2w1i_A          120 KLIMEYLPYGSLRDYLQKHKE--RIDHIKLL  148 (326)
T ss_dssp             EEEECCCTTCBHHHHHHHSTT--SSCHHHHH
T ss_pred             EEEEECCCCCCHHHHHHhccc--CCCHHHHH
Confidence            899999999999999987532  35665443

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.20  E-value=2.9e-11  Score=118.20  Aligned_cols=91  Identities=22%  Similarity=0.322  Sum_probs=73.6

Q ss_pred             hccccccceecccCceeEEEEEc-CCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEec
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  423 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey  423 (451)
                      .++|...+.||+|+||.||++.. .+++.||||.+....  ..+.+.+|+.++.+++||||+++++++...+..++|+||
T Consensus        52 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  129 (349)
T 2w4o_A           52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLEL  129 (349)
T ss_dssp             GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             cCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEe
Confidence            45688889999999999999995 457899999997543  345788999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhccC
Q 013018          424 VPNKSLDYFLYAQS  437 (451)
Q Consensus       424 ~~~GsL~~~L~~~~  437 (451)
                      +++|+|.+++....
T Consensus       130 ~~~~~L~~~l~~~~  143 (349)
T 2w4o_A          130 VTGGELFDRIVEKG  143 (349)
T ss_dssp             CCSCBHHHHHTTCS
T ss_pred             CCCCCHHHHHHhcC
Confidence            99999999998643

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.20  E-value=2.6e-11  Score=116.29  Aligned_cols=105  Identities=24%  Similarity=0.434  Sum_probs=87.3

Q ss_pred             cccChHHHHHhhccccccceecccCceeEEEEEc------CCCcEEEEEEeccCC-hhhHHHHHHHHHHHhcC-CCCCcc
Q 013018          334 LQFDFETIEVATNNFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRLSRSS-GQGGQEFKNEVVLVAKL-QHRNLV  405 (451)
Q Consensus       334 ~~~~~~~l~~~~~~~~~~~~lG~G~fg~V~~~~l------~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~h~niv  405 (451)
                      ..+....++...++|...+.||+|+||.||++..      .+++.||||.+.... ....+.+.+|+.++.++ +||||+
T Consensus        15 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv   94 (316)
T 2xir_A           15 LPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV   94 (316)
T ss_dssp             SCCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred             ccccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCee
Confidence            3455666777788999999999999999999973      356889999997653 33456799999999999 799999


Q ss_pred             cceeEEEeCc-eeeEEEeccCCCCHHHHHhccCC
Q 013018          406 RLLGFCLEGE-EKILVYEFVPNKSLDYFLYAQSP  438 (451)
Q Consensus       406 ~l~g~~~~~~-~~~lv~ey~~~GsL~~~L~~~~~  438 (451)
                      ++++++...+ ..++|+||+++|+|.+++.....
T Consensus        95 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~  128 (316)
T 2xir_A           95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRN  128 (316)
T ss_dssp             CEEEEECCTTSCCEEEEECCTTEEHHHHHHTCTT
T ss_pred             eEEEEEecCCCceEEEEEcCCCCcHHHHHHhccc
Confidence            9999987654 58999999999999999997553

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.20  E-value=3.9e-11  Score=114.63  Aligned_cols=92  Identities=24%  Similarity=0.343  Sum_probs=78.4

Q ss_pred             ccccccceecccCceeEEEEEc-CCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEecc
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFV  424 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~  424 (451)
                      ++|...+.||+|+||.||++.. .+|+.||+|.+........+.+.+|+.++.+++||||+++++++...+..++|+||+
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   88 (304)
T 2jam_A            9 KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLV   88 (304)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred             ccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEcC
Confidence            4678889999999999999994 478999999998654444567999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhccC
Q 013018          425 PNKSLDYFLYAQS  437 (451)
Q Consensus       425 ~~GsL~~~L~~~~  437 (451)
                      ++|+|.+++....
T Consensus        89 ~~~~L~~~l~~~~  101 (304)
T 2jam_A           89 SGGELFDRILERG  101 (304)
T ss_dssp             CSCBHHHHHHHHS
T ss_pred             CCccHHHHHHHcC
Confidence            9999999997643

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.20  E-value=4.1e-11  Score=115.50  Aligned_cols=91  Identities=24%  Similarity=0.374  Sum_probs=80.1

Q ss_pred             ccccccceecccCceeEEEEEc-CCCcEEEEEEeccCCh------hhHHHHHHHHHHHhcCCCCCcccceeEEEeCceee
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSG------QGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKI  418 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~  418 (451)
                      ++|...+.||+|+||.||++.. .+|+.||||.+.....      ...+++.+|+.++.+++||||+++++++......+
T Consensus        12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   91 (321)
T 2a2a_A           12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVV   91 (321)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             ccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEE
Confidence            4578889999999999999994 5689999999975422      13578999999999999999999999999999999


Q ss_pred             EEEeccCCCCHHHHHhcc
Q 013018          419 LVYEFVPNKSLDYFLYAQ  436 (451)
Q Consensus       419 lv~ey~~~GsL~~~L~~~  436 (451)
                      +|+||+++|+|.+++...
T Consensus        92 lv~e~~~~~~L~~~l~~~  109 (321)
T 2a2a_A           92 LILELVSGGELFDFLAQK  109 (321)
T ss_dssp             EEECCCCSCBHHHHHHTC
T ss_pred             EEEEcCCCCcHHHHHHhc
Confidence            999999999999999864

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.20  E-value=3.3e-11  Score=116.48  Aligned_cols=104  Identities=31%  Similarity=0.561  Sum_probs=83.6

Q ss_pred             hhccccccceecccCceeEEEEEc------CCCcEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCce
Q 013018          344 ATNNFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRLSRS-SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEE  416 (451)
Q Consensus       344 ~~~~~~~~~~lG~G~fg~V~~~~l------~~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~  416 (451)
                      ..++|...+.||+|+||.||++..      ..+..||||.+... ......++.+|+.++.+++||||+++++++.....
T Consensus        28 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~  107 (327)
T 2yfx_A           28 PRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP  107 (327)
T ss_dssp             CGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             ChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCC
Confidence            456788899999999999999984      24678999999754 34455789999999999999999999999999889


Q ss_pred             eeEEEeccCCCCHHHHHhccCCC----CCCchhhh
Q 013018          417 KILVYEFVPNKSLDYFLYAQSPK----NNNNWIGQ  447 (451)
Q Consensus       417 ~~lv~ey~~~GsL~~~L~~~~~~----~~l~W~~r  447 (451)
                      .+||+||+++|+|.++++.....    ..++|.+.
T Consensus       108 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~  142 (327)
T 2yfx_A          108 RFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDL  142 (327)
T ss_dssp             CEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHH
T ss_pred             cEEEEecCCCCcHHHHHHhhcccccccccccHHHH
Confidence            99999999999999999975432    23555544

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.20  E-value=1.7e-11  Score=117.73  Aligned_cols=98  Identities=22%  Similarity=0.250  Sum_probs=80.9

Q ss_pred             ccccccceecccCceeEEEEE-cCCCcEEEEEEeccCC---hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCce----e
Q 013018          346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSS---GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEE----K  417 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~----~  417 (451)
                      ++|...+.||+|+||.||++. ..+++.||||++....   ......+.+|+.++.+++||||+++++++.....    .
T Consensus        12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~   91 (311)
T 3ork_A           12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP   91 (311)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred             CcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCccc
Confidence            568889999999999999999 5678999999997542   2334679999999999999999999999876443    4


Q ss_pred             eEEEeccCCCCHHHHHhccCCCCCCchhh
Q 013018          418 ILVYEFVPNKSLDYFLYAQSPKNNNNWIG  446 (451)
Q Consensus       418 ~lv~ey~~~GsL~~~L~~~~~~~~l~W~~  446 (451)
                      ++||||+++|+|.++++....   ++|.+
T Consensus        92 ~lv~e~~~g~~L~~~l~~~~~---~~~~~  117 (311)
T 3ork_A           92 YIVMEYVDGVTLRDIVHTEGP---MTPKR  117 (311)
T ss_dssp             EEEEECCCEEEHHHHHHHHCS---CCHHH
T ss_pred             EEEEecCCCCCHHHHHHhcCC---CCHHH
Confidence            899999999999999986542   45544

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.19  E-value=4.4e-11  Score=117.17  Aligned_cols=93  Identities=23%  Similarity=0.275  Sum_probs=82.1

Q ss_pred             hccccccceecccCceeEEEEEc-CCCcEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEe
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRS-SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  422 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  422 (451)
                      .++|...+.||+|+||.||++.. .++..||+|.+... .....+.+.+|+.++.+++||||+++++++...+..+||||
T Consensus        32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  111 (360)
T 3eqc_A           32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME  111 (360)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred             cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEE
Confidence            45688899999999999999994 47899999999765 33445789999999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhccC
Q 013018          423 FVPNKSLDYFLYAQS  437 (451)
Q Consensus       423 y~~~GsL~~~L~~~~  437 (451)
                      |+++|+|.++++...
T Consensus       112 ~~~~~~L~~~l~~~~  126 (360)
T 3eqc_A          112 HMDGGSLDQVLKKAG  126 (360)
T ss_dssp             CCTTCBHHHHHHHHS
T ss_pred             CCCCCCHHHHHHHcC
Confidence            999999999998754

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.19  E-value=3.8e-11  Score=114.40  Aligned_cols=100  Identities=32%  Similarity=0.488  Sum_probs=79.9

Q ss_pred             ccccccceecccCceeEEEEEc-----CCCcEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCcccceeEEEeC--cee
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVL-----PSGQEIAVKRLSRSS-GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEG--EEK  417 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l-----~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~--~~~  417 (451)
                      +.|+..+.||+|+||.||++.+     ..++.||||.+.... ....+.+.+|+.++.+++||||+++++++...  ...
T Consensus        21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~  100 (302)
T 4e5w_A           21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI  100 (302)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred             hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence            4577889999999999999983     468899999997543 33457899999999999999999999999875  568


Q ss_pred             eEEEeccCCCCHHHHHhccCCCCCCchhhh
Q 013018          418 ILVYEFVPNKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       418 ~lv~ey~~~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                      ++|+||+++|+|.++++....  .+++.++
T Consensus       101 ~lv~e~~~~~~L~~~l~~~~~--~~~~~~~  128 (302)
T 4e5w_A          101 KLIMEFLPSGSLKEYLPKNKN--KINLKQQ  128 (302)
T ss_dssp             EEEEECCTTCBHHHHHHHHTT--TCCHHHH
T ss_pred             EEEEEeCCCCcHHHHHHhccc--cCCHHHH
Confidence            899999999999999976432  2555443

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.19  E-value=2.7e-11  Score=115.49  Aligned_cols=92  Identities=25%  Similarity=0.441  Sum_probs=79.2

Q ss_pred             hccccccceecccCceeEEEEEc-CCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEec
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  423 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey  423 (451)
                      .++|...+.||+|+||.||++.. .++..|++|.+........+.+.+|+.++.+++||||+++++++...+..++|+||
T Consensus        18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   97 (302)
T 2j7t_A           18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEF   97 (302)
T ss_dssp             GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEEC
T ss_pred             ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEe
Confidence            45688899999999999999995 46899999999776656678899999999999999999999999998999999999


Q ss_pred             cCCCCHHHHHhcc
Q 013018          424 VPNKSLDYFLYAQ  436 (451)
Q Consensus       424 ~~~GsL~~~L~~~  436 (451)
                      +++|+|.+++...
T Consensus        98 ~~~~~l~~~~~~~  110 (302)
T 2j7t_A           98 CPGGAVDAIMLEL  110 (302)
T ss_dssp             CTTEEHHHHHHHH
T ss_pred             CCCCcHHHHHHhh
Confidence            9999999998863

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.19  E-value=4e-11  Score=115.69  Aligned_cols=93  Identities=18%  Similarity=0.308  Sum_probs=80.9

Q ss_pred             hccccccceecccCceeEEEEEc-CCCcEEEEEEeccCC---hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEE
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSS---GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILV  420 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv  420 (451)
                      .++|...+.||+|+||.||++.. .+|+.+|+|.+....   ....+.+.+|..++..++||||+++++.+......++|
T Consensus         5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv   84 (318)
T 1fot_A            5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI   84 (318)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred             hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence            35688899999999999999994 578999999996532   23356788999999999999999999999999999999


Q ss_pred             EeccCCCCHHHHHhccC
Q 013018          421 YEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       421 ~ey~~~GsL~~~L~~~~  437 (451)
                      |||+++|+|.++|+...
T Consensus        85 ~e~~~gg~L~~~l~~~~  101 (318)
T 1fot_A           85 MDYIEGGELFSLLRKSQ  101 (318)
T ss_dssp             ECCCCSCBHHHHHHHTS
T ss_pred             EeCCCCCCHHHHHHHcC
Confidence            99999999999998643

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.19  E-value=2.1e-11  Score=114.25  Aligned_cols=90  Identities=32%  Similarity=0.545  Sum_probs=75.0

Q ss_pred             hccccccceecccCceeEEEEEcCCCcEEEEEEeccCCh----hhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEE
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSG----QGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILV  420 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv  420 (451)
                      .++|+..+.||+|+||.||++.. .++.+|||.+.....    +..+.+.+|+.++.+++||||+++++++...+..++|
T Consensus         6 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   84 (271)
T 3dtc_A            6 FAELTLEEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV   84 (271)
T ss_dssp             TTSEEEEEEEEEETTEEEEEEEE-TTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred             hhheeeeeeeccCCCeEEEEEEE-cCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence            45688899999999999999997 588999999865422    2346799999999999999999999999998999999


Q ss_pred             EeccCCCCHHHHHhc
Q 013018          421 YEFVPNKSLDYFLYA  435 (451)
Q Consensus       421 ~ey~~~GsL~~~L~~  435 (451)
                      +||+++|+|.++++.
T Consensus        85 ~e~~~~~~L~~~~~~   99 (271)
T 3dtc_A           85 MEFARGGPLNRVLSG   99 (271)
T ss_dssp             EECCTTEEHHHHHTS
T ss_pred             EEcCCCCCHHHHhhc
Confidence            999999999999974

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.18  E-value=7.1e-11  Score=112.19  Aligned_cols=100  Identities=18%  Similarity=0.249  Sum_probs=83.7

Q ss_pred             hccccccceecccCceeEEEEEc-CCCcEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEE
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRS---SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILV  420 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv  420 (451)
                      .++|...+.||+|+||.||++.. .+++.+|+|.+...   .....+.+.+|+.++++++||||+++++++...+..++|
T Consensus        14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv   93 (294)
T 2rku_A           14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV   93 (294)
T ss_dssp             TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence            35678889999999999999995 46889999998654   233457799999999999999999999999999999999


Q ss_pred             EeccCCCCHHHHHhccCCCCCCchhhh
Q 013018          421 YEFVPNKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       421 ~ey~~~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                      +||+++++|.+++....   .++|.+.
T Consensus        94 ~e~~~~~~L~~~~~~~~---~~~~~~~  117 (294)
T 2rku_A           94 LELCRRRSLLELHKRRK---ALTEPEA  117 (294)
T ss_dssp             EECCTTCBHHHHHHHHC---SCCHHHH
T ss_pred             EecCCCCCHHHHHHhcC---CCCHHHH
Confidence            99999999999988643   2555443

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.18  E-value=4.3e-11  Score=112.66  Aligned_cols=104  Identities=18%  Similarity=0.238  Sum_probs=84.9

Q ss_pred             hccccccceecccCceeEEEEEc-CCCcEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCcccceeEEEe--CceeeE
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRS--SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLE--GEEKIL  419 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~--~~~~~l  419 (451)
                      .++|+..+.||+|+||.||++.. .+++.|++|.+...  .....+.+.+|+.++.+++||||+++++++..  ....++
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   84 (279)
T 2w5a_A            5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI   84 (279)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred             hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence            35688899999999999999994 57899999999754  33445789999999999999999999998864  557899


Q ss_pred             EEeccCCCCHHHHHhccC-CCCCCchhhhh
Q 013018          420 VYEFVPNKSLDYFLYAQS-PKNNNNWIGQD  448 (451)
Q Consensus       420 v~ey~~~GsL~~~L~~~~-~~~~l~W~~r~  448 (451)
                      |+||+++|+|.+++.... .+..++|....
T Consensus        85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~  114 (279)
T 2w5a_A           85 VMEYCEGGDLASVITKGTKERQYLDEEFVL  114 (279)
T ss_dssp             EEECCTTEEHHHHHHHHHHTTCCCCHHHHH
T ss_pred             EEeCCCCCCHHHHHHhhcccCCCCCHHHHH
Confidence            999999999999998643 23346665543

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.18  E-value=7.6e-11  Score=112.88  Aligned_cols=90  Identities=26%  Similarity=0.467  Sum_probs=78.1

Q ss_pred             ccccccceecccCceeEEEEE-cCCCcEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEE
Q 013018          346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRS---SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  421 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~  421 (451)
                      ++|...+.||+|+||.||++. ..+++.||||.+...   .....+.+.+|+.++.+++||||+++++++...+..++|+
T Consensus        32 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  111 (310)
T 2wqm_A           32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL  111 (310)
T ss_dssp             GGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             cceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEE
Confidence            457888999999999999999 467899999999753   2344578999999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhc
Q 013018          422 EFVPNKSLDYFLYA  435 (451)
Q Consensus       422 ey~~~GsL~~~L~~  435 (451)
                      ||+++|+|.+++..
T Consensus       112 e~~~~~~L~~~l~~  125 (310)
T 2wqm_A          112 ELADAGDLSRMIKH  125 (310)
T ss_dssp             ECCCSCBHHHHHHH
T ss_pred             ecCCCCCHHHHHHH
Confidence            99999999999975

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.17  E-value=8e-11  Score=111.11  Aligned_cols=93  Identities=30%  Similarity=0.417  Sum_probs=81.2

Q ss_pred             hccccccceecccCceeEEEEE-cCCCcEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEE
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRS--SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  421 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~  421 (451)
                      .++|...+.||+|+||.||++. ..+++.||+|.+...  .....+.+.+|+.++.+++||||+++++++...+..++|+
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   84 (284)
T 3kk8_A            5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF   84 (284)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence            3568889999999999999998 456899999999654  3344577899999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhccC
Q 013018          422 EFVPNKSLDYFLYAQS  437 (451)
Q Consensus       422 ey~~~GsL~~~L~~~~  437 (451)
                      ||+++|+|.+++....
T Consensus        85 e~~~~~~l~~~~~~~~  100 (284)
T 3kk8_A           85 DLVTGGELFEDIVARE  100 (284)
T ss_dssp             CCCCSCBHHHHHHHHS
T ss_pred             ecCCCCCHHHHHHhcC
Confidence            9999999999988653

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.17  E-value=3.5e-11  Score=116.45  Aligned_cols=93  Identities=23%  Similarity=0.347  Sum_probs=75.3

Q ss_pred             hccccccceecccCceeEEEEEc----CCCcEEEEEEeccCC----hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCce
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGVL----PSGQEIAVKRLSRSS----GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEE  416 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~l----~~g~~vavK~l~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~  416 (451)
                      .++|...+.||+|+||.||++..    .+++.+|+|.+....    ......+.+|+.++.+++||||+++++++...+.
T Consensus        16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~   95 (327)
T 3a62_A           16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK   95 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred             HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence            45688899999999999999985    478999999997542    2234568899999999999999999999999999


Q ss_pred             eeEEEeccCCCCHHHHHhccC
Q 013018          417 KILVYEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       417 ~~lv~ey~~~GsL~~~L~~~~  437 (451)
                      .+|||||+++|+|.+++....
T Consensus        96 ~~lv~e~~~~~~L~~~l~~~~  116 (327)
T 3a62_A           96 LYLILEYLSGGELFMQLEREG  116 (327)
T ss_dssp             EEEEEECCTTEEHHHHHHHHS
T ss_pred             EEEEEeCCCCCcHHHHHHhCC
Confidence            999999999999999998643

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.17  E-value=5e-11  Score=116.51  Aligned_cols=99  Identities=26%  Similarity=0.370  Sum_probs=82.0

Q ss_pred             ccccccceecccCceeEEEEE-cCCCcEEEEEEeccCC---hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEE
Q 013018          346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSS---GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  421 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~  421 (451)
                      +.|...+.||+|+||.||++. ..+++.||||++....   ....+++.+|+.++.+++||||+++++++...+..+||+
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  133 (348)
T 1u5q_A           54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM  133 (348)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence            447788999999999999999 5688999999997542   223467999999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhccCCCCCCchhhh
Q 013018          422 EFVPNKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       422 ey~~~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                      ||++ |+|.+++....  ..++|.++
T Consensus       134 e~~~-g~l~~~l~~~~--~~l~~~~~  156 (348)
T 1u5q_A          134 EYCL-GSASDLLEVHK--KPLQEVEI  156 (348)
T ss_dssp             ECCS-EEHHHHHHHHT--SCCCHHHH
T ss_pred             ecCC-CCHHHHHHHhc--CCCCHHHH
Confidence            9997 78998887533  23566544

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.17  E-value=5.6e-11  Score=124.95  Aligned_cols=101  Identities=27%  Similarity=0.449  Sum_probs=80.7

Q ss_pred             hccccccc-eecccCceeEEEEEcC---CCcEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeE
Q 013018          345 TNNFSTDN-KLGEGGFGEVYKGVLP---SGQEIAVKRLSRSS-GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKIL  419 (451)
Q Consensus       345 ~~~~~~~~-~lG~G~fg~V~~~~l~---~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l  419 (451)
                      .+++...+ +||+|+||.||+|.+.   ++..||||.++... ....++|.+|+.+|.+++||||++++|++.. +..+|
T Consensus       334 ~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~l  412 (613)
T 2ozo_A          334 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALML  412 (613)
T ss_dssp             TTSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEE
T ss_pred             ccceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEE
Confidence            33444444 7999999999999853   45679999997653 3456889999999999999999999999865 66899


Q ss_pred             EEeccCCCCHHHHHhccCCCCCCchhhhh
Q 013018          420 VYEFVPNKSLDYFLYAQSPKNNNNWIGQD  448 (451)
Q Consensus       420 v~ey~~~GsL~~~L~~~~~~~~l~W~~r~  448 (451)
                      ||||+++|+|.++|+...  ..++|.++.
T Consensus       413 v~E~~~~g~L~~~l~~~~--~~l~~~~~~  439 (613)
T 2ozo_A          413 VMEMAGGGPLHKFLVGKR--EEIPVSNVA  439 (613)
T ss_dssp             EEECCTTCBHHHHHTTCT--TTSCHHHHH
T ss_pred             EEEeCCCCcHHHHHhhcc--CCCCHHHHH
Confidence            999999999999998643  346665543

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.17  E-value=7.6e-11  Score=114.40  Aligned_cols=99  Identities=18%  Similarity=0.252  Sum_probs=83.2

Q ss_pred             ccccccceecccCceeEEEEEc-CCCcEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEE
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRS---SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  421 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~  421 (451)
                      ++|...+.||+|+||.||++.. .+++.+|+|.+...   .....+.+.+|+.++.+++||||+++++++...+..++|+
T Consensus        41 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~  120 (335)
T 2owb_A           41 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVL  120 (335)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             CceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEE
Confidence            4577889999999999999994 46789999998654   2344577999999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhccCCCCCCchhhh
Q 013018          422 EFVPNKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       422 ey~~~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                      ||+++++|.+++....   .++|.+.
T Consensus       121 e~~~~~~L~~~~~~~~---~l~~~~~  143 (335)
T 2owb_A          121 ELCRRRSLLELHKRRK---ALTEPEA  143 (335)
T ss_dssp             CCCTTCBHHHHHHHHC---SCCHHHH
T ss_pred             ecCCCCCHHHHHhccC---CCCHHHH
Confidence            9999999999988643   2555443

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.17  E-value=1e-10  Score=112.54  Aligned_cols=96  Identities=29%  Similarity=0.430  Sum_probs=80.0

Q ss_pred             ccccceecccCceeEEEEEc-----CCCcEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCcccceeEEEeC--ceeeE
Q 013018          348 FSTDNKLGEGGFGEVYKGVL-----PSGQEIAVKRLSRSS-GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEG--EEKIL  419 (451)
Q Consensus       348 ~~~~~~lG~G~fg~V~~~~l-----~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~--~~~~l  419 (451)
                      |...+.||+|+||.||++.+     .+++.||||++.... .+..+.+.+|+.++++++||||+++++++...  ...++
T Consensus        33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l  112 (318)
T 3lxp_A           33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL  112 (318)
T ss_dssp             EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred             HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence            47889999999999999874     257899999997653 34457899999999999999999999999874  57899


Q ss_pred             EEeccCCCCHHHHHhccCCCCCCchhhh
Q 013018          420 VYEFVPNKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       420 v~ey~~~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                      |+||+++|+|.+++....    ++|.+.
T Consensus       113 v~e~~~~~~L~~~l~~~~----~~~~~~  136 (318)
T 3lxp_A          113 VMEYVPLGSLRDYLPRHS----IGLAQL  136 (318)
T ss_dssp             EECCCTTCBHHHHGGGSC----CCHHHH
T ss_pred             EEecccCCcHHHHHhhCC----CCHHHH
Confidence            999999999999998643    555443

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.17  E-value=3.8e-11  Score=115.19  Aligned_cols=113  Identities=26%  Similarity=0.408  Sum_probs=84.4

Q ss_pred             cChHHHHHhhccccccceecccCceeEEEEEcC----CCcEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccccee
Q 013018          336 FDFETIEVATNNFSTDNKLGEGGFGEVYKGVLP----SGQEIAVKRLSRS--SGQGGQEFKNEVVLVAKLQHRNLVRLLG  409 (451)
Q Consensus       336 ~~~~~l~~~~~~~~~~~~lG~G~fg~V~~~~l~----~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g  409 (451)
                      ...+++....++|...+.||+|+||.||++...    .+..||||.+...  .....+.+.+|+.++.+++||||+++++
T Consensus        24 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~  103 (313)
T 3brb_A           24 NKLEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLG  103 (313)
T ss_dssp             CCTTTTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCE
T ss_pred             hhHHhcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeE
Confidence            344555666778999999999999999999853    3458999998754  3344578999999999999999999999


Q ss_pred             EEEeCc-----eeeEEEeccCCCCHHHHHhccC---CCCCCchhhhh
Q 013018          410 FCLEGE-----EKILVYEFVPNKSLDYFLYAQS---PKNNNNWIGQD  448 (451)
Q Consensus       410 ~~~~~~-----~~~lv~ey~~~GsL~~~L~~~~---~~~~l~W~~r~  448 (451)
                      ++...+     ..++|+||+++|+|.+++....   ....++|.+.+
T Consensus       104 ~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~  150 (313)
T 3brb_A          104 VCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLL  150 (313)
T ss_dssp             EEEC-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHH
T ss_pred             EEeeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHH
Confidence            987654     3489999999999999996532   22346665443

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.17  E-value=7.6e-11  Score=113.02  Aligned_cols=100  Identities=18%  Similarity=0.216  Sum_probs=84.0

Q ss_pred             hccccccceecccCceeEEEEEc-CCCcEEEEEEeccCCh---hhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEE
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSG---QGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILV  420 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv  420 (451)
                      .++|...+.||+|+||.||++.. .+++.||+|.+.....   ...+.+.+|+.++.+++||||+++++++...+..++|
T Consensus        33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv  112 (309)
T 2h34_A           33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD  112 (309)
T ss_dssp             -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence            35688899999999999999994 4788999999975422   2347799999999999999999999999999999999


Q ss_pred             EeccCCCCHHHHHhccCCCCCCchhhh
Q 013018          421 YEFVPNKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       421 ~ey~~~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                      +||+++++|.++++....   ++|.+.
T Consensus       113 ~e~~~~~~L~~~l~~~~~---~~~~~~  136 (309)
T 2h34_A          113 MRLINGVDLAAMLRRQGP---LAPPRA  136 (309)
T ss_dssp             EECCCCEEHHHHHHHHCS---CCHHHH
T ss_pred             EEecCCCCHHHHHHhcCC---CCHHHH
Confidence            999999999999986532   555443

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.17  E-value=8e-11  Score=114.88  Aligned_cols=92  Identities=18%  Similarity=0.244  Sum_probs=79.8

Q ss_pred             ccccccceecccCceeEEEEEc-CCCcEEEEEEeccC---ChhhHHHHHHHHHHHhcC-CCCCcccceeEEEeCceeeEE
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRS---SGQGGQEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKILV  420 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lv  420 (451)
                      ++|...+.||+|+||.||++.. .+++.+|+|.+...   .....+.+.+|..++.++ +||||+++++++...+..++|
T Consensus         9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv   88 (345)
T 3a8x_A            9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV   88 (345)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence            5678889999999999999995 46889999999754   233446788999999988 899999999999999999999


Q ss_pred             EeccCCCCHHHHHhccC
Q 013018          421 YEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       421 ~ey~~~GsL~~~L~~~~  437 (451)
                      |||+++|+|.+++....
T Consensus        89 ~e~~~gg~L~~~l~~~~  105 (345)
T 3a8x_A           89 IEYVNGGDLMFHMQRQR  105 (345)
T ss_dssp             ECCCCSCBHHHHHHHHS
T ss_pred             EeCCCCCcHHHHHHHcC
Confidence            99999999999998643

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.16  E-value=6.1e-11  Score=115.99  Aligned_cols=92  Identities=23%  Similarity=0.239  Sum_probs=80.6

Q ss_pred             ccccccceecccCceeEEEEEc-CCCcEEEEEEeccCC---hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEE
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSS---GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  421 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~  421 (451)
                      ++|...+.||+|+||.||++.. .+|+.||||.+....   ....+.+.+|+.++.+++||||+++++++...+..+|||
T Consensus        41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~  120 (350)
T 1rdq_E           41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM  120 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence            4678889999999999999994 578999999996432   233567899999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhccC
Q 013018          422 EFVPNKSLDYFLYAQS  437 (451)
Q Consensus       422 ey~~~GsL~~~L~~~~  437 (451)
                      ||+++|+|.++|+...
T Consensus       121 e~~~gg~L~~~l~~~~  136 (350)
T 1rdq_E          121 EYVAGGEMFSHLRRIG  136 (350)
T ss_dssp             ECCTTCBHHHHHHHHC
T ss_pred             cCCCCCcHHHHHHHcC
Confidence            9999999999998644

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.16  E-value=8.3e-11  Score=120.81  Aligned_cols=99  Identities=24%  Similarity=0.276  Sum_probs=80.7

Q ss_pred             hccccccceecccCceeEEEEE-cCCCcEEEEEEeccCCh-------------hhHHHHHHHHHHHhcCCCCCcccceeE
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSG-------------QGGQEFKNEVVLVAKLQHRNLVRLLGF  410 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~-------------~~~~~~~~E~~~l~~l~h~niv~l~g~  410 (451)
                      .++|...++||+|+||.||++. ..+++.+|||.+.....             ...+.+.+|+.++.+++||||++++++
T Consensus        35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~  114 (504)
T 3q5i_A           35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV  114 (504)
T ss_dssp             GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred             ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence            4568889999999999999999 45688999999865421             234679999999999999999999999


Q ss_pred             EEeCceeeEEEeccCCCCHHHHHhccCCCCCCchhh
Q 013018          411 CLEGEEKILVYEFVPNKSLDYFLYAQSPKNNNNWIG  446 (451)
Q Consensus       411 ~~~~~~~~lv~ey~~~GsL~~~L~~~~~~~~l~W~~  446 (451)
                      +......+||+||+++|+|.+++.....   ++|..
T Consensus       115 ~~~~~~~~lv~e~~~gg~L~~~l~~~~~---~~~~~  147 (504)
T 3q5i_A          115 FEDKKYFYLVTEFYEGGELFEQIINRHK---FDECD  147 (504)
T ss_dssp             EECSSEEEEEEECCTTCBHHHHHHHHSC---CCHHH
T ss_pred             EEcCCEEEEEEecCCCCcHHHHHHHcCC---CCHHH
Confidence            9999999999999999999999986433   55544

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.16  E-value=8.7e-11  Score=112.45  Aligned_cols=92  Identities=27%  Similarity=0.383  Sum_probs=80.0

Q ss_pred             ccccccceecccCceeEEEEEc-CCCcEEEEEEeccCCh--hhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEe
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSG--QGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  422 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  422 (451)
                      ++|...+.||+|+||.||++.. .+|+.||||++.....  ...+.+.+|+.++.+++||||+++++++...+..++|+|
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (311)
T 4agu_A            3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE   82 (311)
T ss_dssp             CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence            4678889999999999999995 4689999999865432  234678999999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhccC
Q 013018          423 FVPNKSLDYFLYAQS  437 (451)
Q Consensus       423 y~~~GsL~~~L~~~~  437 (451)
                      |+++++|.++++..+
T Consensus        83 ~~~~~~l~~~~~~~~   97 (311)
T 4agu_A           83 YCDHTVLHELDRYQR   97 (311)
T ss_dssp             CCSEEHHHHHHHTSS
T ss_pred             eCCCchHHHHHhhhc
Confidence            999999999988643

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.16  E-value=7.8e-11  Score=110.88  Aligned_cols=100  Identities=24%  Similarity=0.415  Sum_probs=83.6

Q ss_pred             ccccccceecccCceeEEEEE-cCCCcEEEEEEeccCC---hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEE
Q 013018          346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSS---GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  421 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~  421 (451)
                      ++|...+.||+|+||.||++. ..+++.||||.+....   ....+.+.+|+.++.+++||||+++++++...+..++|+
T Consensus        11 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   90 (278)
T 3cok_A           11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVL   90 (278)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEE
T ss_pred             ccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEE
Confidence            468888999999999999999 4678999999996432   122467999999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhccCCCCCCchhhh
Q 013018          422 EFVPNKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       422 ey~~~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                      ||+++|+|.+++....  ..+++.+.
T Consensus        91 e~~~~~~L~~~l~~~~--~~~~~~~~  114 (278)
T 3cok_A           91 EMCHNGEMNRYLKNRV--KPFSENEA  114 (278)
T ss_dssp             ECCTTEEHHHHHHTCS--SCCCHHHH
T ss_pred             ecCCCCcHHHHHhhcc--CCCCHHHH
Confidence            9999999999998643  23555443

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.16  E-value=3.6e-11  Score=113.24  Aligned_cols=103  Identities=32%  Similarity=0.422  Sum_probs=84.5

Q ss_pred             HHhhccccccceecccCceeEEEEEcCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEE
Q 013018          342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  421 (451)
Q Consensus       342 ~~~~~~~~~~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~  421 (451)
                      +...++|...+.||+|+||.||++...++..||||.+.... ...+.+.+|+.++.+++||||+++++++. .+..++|+
T Consensus         9 ~v~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~   86 (279)
T 1qpc_A            9 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIIT   86 (279)
T ss_dssp             BCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEE
T ss_pred             ccCHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEE
Confidence            34556788899999999999999998788899999997543 34578999999999999999999999875 45689999


Q ss_pred             eccCCCCHHHHHhccCCCCCCchhhh
Q 013018          422 EFVPNKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       422 ey~~~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                      ||+++|+|.+++..... ..++|.+.
T Consensus        87 e~~~~~~L~~~l~~~~~-~~~~~~~~  111 (279)
T 1qpc_A           87 EYMENGSLVDFLKTPSG-IKLTINKL  111 (279)
T ss_dssp             ECCTTCBHHHHTTSHHH-HTCCHHHH
T ss_pred             ecCCCCCHHHHHhcCCC-CCCCHHHH
Confidence            99999999999986321 13555543

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.16  E-value=5.5e-11  Score=117.69  Aligned_cols=93  Identities=20%  Similarity=0.295  Sum_probs=81.0

Q ss_pred             hccccccceecccCceeEEEEE-cCCCcEEEEEEeccCC---hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEE
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSS---GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILV  420 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv  420 (451)
                      .++|...+.||+|+||.||++. ..+++.+|+|.+....   ....+.+.+|+.+|.+++||||+++++++...+..++|
T Consensus        14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv   93 (384)
T 4fr4_A           14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMV   93 (384)
T ss_dssp             GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence            3568889999999999999999 4568899999986432   23356789999999999999999999999999999999


Q ss_pred             EeccCCCCHHHHHhccC
Q 013018          421 YEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       421 ~ey~~~GsL~~~L~~~~  437 (451)
                      +||+++|+|.++++...
T Consensus        94 ~e~~~gg~L~~~l~~~~  110 (384)
T 4fr4_A           94 VDLLLGGDLRYHLQQNV  110 (384)
T ss_dssp             ECCCTTEEHHHHHHTTC
T ss_pred             EecCCCCcHHHHHHhcC
Confidence            99999999999998643

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.15  E-value=5.6e-11  Score=120.01  Aligned_cols=93  Identities=26%  Similarity=0.370  Sum_probs=79.8

Q ss_pred             hccccccceecccCceeEEEEE-cCCCcEEEEEEeccCC--hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEE
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSS--GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  421 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~  421 (451)
                      .++|...+.||+|+||.||++. ..+|+.+|+|.+....  ....+.+.+|+.++++++||||+++++++...+..+|||
T Consensus        10 ~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~   89 (444)
T 3soa_A           10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIF   89 (444)
T ss_dssp             HHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             cCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEE
Confidence            4568889999999999999998 5678999999997543  234567999999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhccC
Q 013018          422 EFVPNKSLDYFLYAQS  437 (451)
Q Consensus       422 ey~~~GsL~~~L~~~~  437 (451)
                      ||+++|+|.+++..+.
T Consensus        90 E~~~gg~L~~~i~~~~  105 (444)
T 3soa_A           90 DLVTGGELFEDIVARE  105 (444)
T ss_dssp             CCCBCCBHHHHHHHCS
T ss_pred             EeCCCCCHHHHHHHcC
Confidence            9999999999998654

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.15  E-value=9.6e-11  Score=110.05  Aligned_cols=93  Identities=23%  Similarity=0.364  Sum_probs=80.8

Q ss_pred             hccccccceecccCceeEEEEEc-CCCcEEEEEEeccCC---hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEE
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSS---GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILV  420 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv  420 (451)
                      .++|...+.||+|+||.||++.. .+++.|+||.+....   ....+.+.+|+.++++++||||+++++++...+..++|
T Consensus        10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   89 (276)
T 2h6d_A           10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV   89 (276)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence            35678889999999999999995 478999999986532   22346899999999999999999999999999999999


Q ss_pred             EeccCCCCHHHHHhccC
Q 013018          421 YEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       421 ~ey~~~GsL~~~L~~~~  437 (451)
                      +||+++++|.+++....
T Consensus        90 ~e~~~~~~L~~~l~~~~  106 (276)
T 2h6d_A           90 MEYVSGGELFDYICKHG  106 (276)
T ss_dssp             EECCCSCBHHHHHHHHC
T ss_pred             EeccCCCcHHHHHhccC
Confidence            99999999999998653

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.15  E-value=1.3e-10  Score=110.84  Aligned_cols=98  Identities=18%  Similarity=0.320  Sum_probs=83.8

Q ss_pred             ccccccceecccCceeEEEEE-cCCCcEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEec
Q 013018          346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSS-GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  423 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey  423 (451)
                      +.|...+.||+|+||.||++. ..+++.||||.+.... ....+.+.+|+.++.+++||||+++++++......++|+||
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  101 (303)
T 3a7i_A           22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY  101 (303)
T ss_dssp             GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEe
Confidence            457888999999999999998 4578999999997543 34467899999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhccCCCCCCchhhh
Q 013018          424 VPNKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       424 ~~~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                      +++|+|.+++...    .++|...
T Consensus       102 ~~~~~L~~~~~~~----~~~~~~~  121 (303)
T 3a7i_A          102 LGGGSALDLLEPG----PLDETQI  121 (303)
T ss_dssp             CTTEEHHHHHTTS----CCCHHHH
T ss_pred             CCCCcHHHHHhcC----CCCHHHH
Confidence            9999999999753    3555543

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.15  E-value=6.4e-11  Score=111.60  Aligned_cols=93  Identities=27%  Similarity=0.433  Sum_probs=80.3

Q ss_pred             hccccccceecccCceeEEEEE-cCCCcEEEEEEeccCC---hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEE
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSS---GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILV  420 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv  420 (451)
                      .++|...+.||+|+||.||++. ..++..||||.+....   ......+.+|+.++.+++||||+++++++...+..++|
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   87 (279)
T 3fdn_A            8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI   87 (279)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence            4568889999999999999998 4567899999986432   12246789999999999999999999999999999999


Q ss_pred             EeccCCCCHHHHHhccC
Q 013018          421 YEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       421 ~ey~~~GsL~~~L~~~~  437 (451)
                      +||+++|+|.+++....
T Consensus        88 ~e~~~~~~l~~~l~~~~  104 (279)
T 3fdn_A           88 LEYAPLGTVYRELQKLS  104 (279)
T ss_dssp             ECCCTTEEHHHHHHHHS
T ss_pred             EecCCCCcHHHHHHhcC
Confidence            99999999999998643

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.15  E-value=6.3e-11  Score=120.57  Aligned_cols=91  Identities=22%  Similarity=0.374  Sum_probs=79.9

Q ss_pred             ccccccceecccCceeEEEEEc-CCCcEEEEEEeccCC---hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEE
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSS---GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  421 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~  421 (451)
                      ++|...+.||+|+||.||++.. .+|+.||||++....   ....+.+.+|+.+++.++||||+++++++...+..+||+
T Consensus        16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~   95 (476)
T 2y94_A           16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM   95 (476)
T ss_dssp             TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence            4578889999999999999994 479999999996542   123467999999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhcc
Q 013018          422 EFVPNKSLDYFLYAQ  436 (451)
Q Consensus       422 ey~~~GsL~~~L~~~  436 (451)
                      ||+++|+|.+++..+
T Consensus        96 E~~~gg~L~~~l~~~  110 (476)
T 2y94_A           96 EYVSGGELFDYICKN  110 (476)
T ss_dssp             ECCSSEEHHHHTTSS
T ss_pred             eCCCCCcHHHHHHhc
Confidence            999999999999864

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.15  E-value=3.2e-11  Score=114.83  Aligned_cols=94  Identities=17%  Similarity=0.293  Sum_probs=65.8

Q ss_pred             HHhhccccccceecccCceeEEEEE-cCCCcEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeE
Q 013018          342 EVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSS-GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKIL  419 (451)
Q Consensus       342 ~~~~~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l  419 (451)
                      ....++|...+.||+|+||.||++. ..+++.||||.+.... ....+++.+|+.++.+++||||+++++++...+..++
T Consensus        11 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   90 (303)
T 2vwi_A           11 SINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWL   90 (303)
T ss_dssp             --CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEE
T ss_pred             ccchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEE
Confidence            4556788999999999999999998 4578999999986543 2335678999999999999999999999999999999


Q ss_pred             EEeccCCCCHHHHHhc
Q 013018          420 VYEFVPNKSLDYFLYA  435 (451)
Q Consensus       420 v~ey~~~GsL~~~L~~  435 (451)
                      |+||+++|+|.+++..
T Consensus        91 v~e~~~~~~L~~~l~~  106 (303)
T 2vwi_A           91 VMKLLSGGSVLDIIKH  106 (303)
T ss_dssp             EEECCTTCBHHHHHHH
T ss_pred             EehhccCCchHHHHHH
Confidence            9999999999999985

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.15  E-value=6.9e-11  Score=113.51  Aligned_cols=91  Identities=29%  Similarity=0.433  Sum_probs=77.7

Q ss_pred             ccccccceecccCceeEEEEEcCCCcEEEEEEeccCCh--hhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEec
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSG--QGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  423 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey  423 (451)
                      ++|...++||+|+||.||++...+++.||+|++.....  .....+.+|+.++.+++||||+++++++......++||||
T Consensus        21 ~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~  100 (311)
T 3niz_A           21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEF  100 (311)
T ss_dssp             CEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEEC
T ss_pred             hhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEcC
Confidence            56888999999999999999987899999999975422  2346789999999999999999999999998999999999


Q ss_pred             cCCCCHHHHHhccC
Q 013018          424 VPNKSLDYFLYAQS  437 (451)
Q Consensus       424 ~~~GsL~~~L~~~~  437 (451)
                      ++ |+|.+++....
T Consensus       101 ~~-~~l~~~~~~~~  113 (311)
T 3niz_A          101 ME-KDLKKVLDENK  113 (311)
T ss_dssp             CS-EEHHHHHHTCT
T ss_pred             CC-CCHHHHHHhcc
Confidence            97 58988888644

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.15  E-value=1.1e-10  Score=111.07  Aligned_cols=92  Identities=22%  Similarity=0.289  Sum_probs=79.5

Q ss_pred             hccccccceecccCceeEEEEEc-CCCcEEEEEEeccCC---------hhhHHHHHHHHHHHhcCC-CCCcccceeEEEe
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSS---------GQGGQEFKNEVVLVAKLQ-HRNLVRLLGFCLE  413 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~---------~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~  413 (451)
                      .++|...+.||+|+||.||++.. .+++.||||.+....         ....+.+.+|+.++.+++ ||||+++++++..
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~   95 (298)
T 1phk_A           16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET   95 (298)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred             hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc
Confidence            45688899999999999999994 568999999996542         112356889999999995 9999999999999


Q ss_pred             CceeeEEEeccCCCCHHHHHhcc
Q 013018          414 GEEKILVYEFVPNKSLDYFLYAQ  436 (451)
Q Consensus       414 ~~~~~lv~ey~~~GsL~~~L~~~  436 (451)
                      ....++|+||+++|+|.+++..+
T Consensus        96 ~~~~~lv~e~~~~~~L~~~l~~~  118 (298)
T 1phk_A           96 NTFFFLVFDLMKKGELFDYLTEK  118 (298)
T ss_dssp             SSEEEEEEECCTTCBHHHHHHHH
T ss_pred             CCeEEEEEeccCCCcHHHHHhcc
Confidence            99999999999999999999864

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.15  E-value=5.7e-11  Score=115.91  Aligned_cols=96  Identities=20%  Similarity=0.309  Sum_probs=80.4

Q ss_pred             HHhhccccccceecccCceeEEEEEc-CCCcEEEEEEeccCC---hhhHHHHHHHHHHHhcC-CCCCcccceeEEEeCce
Q 013018          342 EVATNNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSS---GQGGQEFKNEVVLVAKL-QHRNLVRLLGFCLEGEE  416 (451)
Q Consensus       342 ~~~~~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~  416 (451)
                      ....++|...+.||+|+||.||++.. .+++.||||.+....   ....+.+..|..++..+ +||||+++++++...+.
T Consensus        13 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~   92 (345)
T 1xjd_A           13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKEN   92 (345)
T ss_dssp             ---CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred             CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCE
Confidence            34557788999999999999999995 568999999997532   23346788999999876 89999999999999999


Q ss_pred             eeEEEeccCCCCHHHHHhccC
Q 013018          417 KILVYEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       417 ~~lv~ey~~~GsL~~~L~~~~  437 (451)
                      .++||||+++|+|.++|+...
T Consensus        93 ~~lv~E~~~gg~L~~~l~~~~  113 (345)
T 1xjd_A           93 LFFVMEYLNGGDLMYHIQSCH  113 (345)
T ss_dssp             EEEEEECCTTCBHHHHHHHHS
T ss_pred             EEEEEeCCCCCcHHHHHHHcC
Confidence            999999999999999998643

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.15  E-value=7.2e-11  Score=115.59  Aligned_cols=95  Identities=23%  Similarity=0.310  Sum_probs=80.3

Q ss_pred             HhhccccccceecccCceeEEEEE-cCCCcEEEEEEeccC---ChhhHHHHHHHHHHHhcC-CCCCcccceeEEEeCcee
Q 013018          343 VATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRS---SGQGGQEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEK  417 (451)
Q Consensus       343 ~~~~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~  417 (451)
                      ...++|...++||+|+||.||++. ..+++.||||++...   .....+.+.+|..++..+ +||||+++++++...+..
T Consensus        20 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~   99 (353)
T 3txo_A           20 LGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRL   99 (353)
T ss_dssp             ---CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred             CchhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEE
Confidence            345678899999999999999999 456899999999753   223446788999999988 699999999999999999


Q ss_pred             eEEEeccCCCCHHHHHhccC
Q 013018          418 ILVYEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       418 ~lv~ey~~~GsL~~~L~~~~  437 (451)
                      +|||||+++|+|.++++..+
T Consensus       100 ~lv~E~~~gg~L~~~l~~~~  119 (353)
T 3txo_A          100 FFVMEFVNGGDLMFHIQKSR  119 (353)
T ss_dssp             EEEEECCCSCBHHHHHHHHS
T ss_pred             EEEEeCCCCCcHHHHHHHcC
Confidence            99999999999999998654

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.15  E-value=3.5e-11  Score=121.65  Aligned_cols=93  Identities=22%  Similarity=0.220  Sum_probs=72.3

Q ss_pred             hccccccceecccCceeEEEEE-cCCCcEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEE
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRS---SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILV  420 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv  420 (451)
                      .++|...++||+|+||.||++. ..+|+.||||.+...   .......+.+|+.++.+++||||+++++++...+..+||
T Consensus       147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv  226 (446)
T 4ejn_A          147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV  226 (446)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred             hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence            3568889999999999999999 567899999999743   223346788999999999999999999999999999999


Q ss_pred             EeccCCCCHHHHHhccC
Q 013018          421 YEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       421 ~ey~~~GsL~~~L~~~~  437 (451)
                      |||+++|+|.+++...+
T Consensus       227 ~e~~~~~~L~~~l~~~~  243 (446)
T 4ejn_A          227 MEYANGGELFFHLSRER  243 (446)
T ss_dssp             ECCCSSCBHHHHHHHHS
T ss_pred             EeeCCCCcHHHHHHhcC
Confidence            99999999999998644

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.14  E-value=6.5e-11  Score=112.08  Aligned_cols=100  Identities=27%  Similarity=0.467  Sum_probs=80.7

Q ss_pred             hccccccc-eecccCceeEEEEEcC---CCcEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeE
Q 013018          345 TNNFSTDN-KLGEGGFGEVYKGVLP---SGQEIAVKRLSRSS-GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKIL  419 (451)
Q Consensus       345 ~~~~~~~~-~lG~G~fg~V~~~~l~---~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l  419 (451)
                      .+++...+ .||+|+||.||++...   .+..||||.+.... ....+.+.+|+.++.+++||||+++++++ ..+..++
T Consensus         8 ~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~l   86 (287)
T 1u59_A            8 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALML   86 (287)
T ss_dssp             GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEE
T ss_pred             HHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEE
Confidence            34555555 8999999999999843   57789999997653 34457899999999999999999999998 5567899


Q ss_pred             EEeccCCCCHHHHHhccCCCCCCchhhh
Q 013018          420 VYEFVPNKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       420 v~ey~~~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                      |+||+++|+|.+++....  ..++|.+.
T Consensus        87 v~e~~~~~~L~~~l~~~~--~~~~~~~~  112 (287)
T 1u59_A           87 VMEMAGGGPLHKFLVGKR--EEIPVSNV  112 (287)
T ss_dssp             EEECCTTEEHHHHHTTCT--TTSCHHHH
T ss_pred             EEEeCCCCCHHHHHHhCC--ccCCHHHH
Confidence            999999999999997533  33555544

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.14  E-value=6e-11  Score=111.99  Aligned_cols=102  Identities=21%  Similarity=0.374  Sum_probs=82.2

Q ss_pred             HhhccccccceecccCceeEEEEEcCC----CcEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCcee
Q 013018          343 VATNNFSTDNKLGEGGFGEVYKGVLPS----GQEIAVKRLSRS-SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEK  417 (451)
Q Consensus       343 ~~~~~~~~~~~lG~G~fg~V~~~~l~~----g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~  417 (451)
                      ...++|...+.||+|+||.||++....    +..||+|.+... .....+.+.+|+.++.+++||||+++++++ ..+..
T Consensus        12 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-~~~~~   90 (281)
T 1mp8_A           12 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPV   90 (281)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-CSSSC
T ss_pred             EehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEE-ccCcc
Confidence            345678889999999999999998532    457999998754 334457899999999999999999999987 45678


Q ss_pred             eEEEeccCCCCHHHHHhccCCCCCCchhhh
Q 013018          418 ILVYEFVPNKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       418 ~lv~ey~~~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                      ++||||+++|+|.++++...  ..++|.+.
T Consensus        91 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~  118 (281)
T 1mp8_A           91 WIIMELCTLGELRSFLQVRK--YSLDLASL  118 (281)
T ss_dssp             EEEEECCTTEEHHHHHHHTT--TTSCHHHH
T ss_pred             EEEEecCCCCCHHHHHHhcC--CCCCHHHH
Confidence            99999999999999998643  23566544

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.14  E-value=1.7e-10  Score=109.35  Aligned_cols=91  Identities=29%  Similarity=0.400  Sum_probs=77.0

Q ss_pred             cccccceecccCceeEEEEE-cCCCcEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCcccceeEEEe----CceeeE
Q 013018          347 NFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRS--SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLE----GEEKIL  419 (451)
Q Consensus       347 ~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~----~~~~~l  419 (451)
                      .|...+.||+|+||.||++. ..++..|++|.+...  .....+.+.+|+.++.+++||||+++++++..    ....++
T Consensus        27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l  106 (290)
T 1t4h_A           27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL  106 (290)
T ss_dssp             EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred             eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEE
Confidence            36677899999999999998 456889999998643  34445789999999999999999999998765    356889


Q ss_pred             EEeccCCCCHHHHHhccC
Q 013018          420 VYEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       420 v~ey~~~GsL~~~L~~~~  437 (451)
                      |+||+++|+|.+++....
T Consensus       107 v~e~~~~~~L~~~l~~~~  124 (290)
T 1t4h_A          107 VTELMTSGTLKTYLKRFK  124 (290)
T ss_dssp             EEECCCSCBHHHHHHHHS
T ss_pred             EEEecCCCCHHHHHHHcc
Confidence            999999999999998643

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.14  E-value=1.2e-10  Score=118.86  Aligned_cols=93  Identities=28%  Similarity=0.357  Sum_probs=81.4

Q ss_pred             hccccccceecccCceeEEEEEc-CCCcEEEEEEeccCC---hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEE
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSS---GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILV  420 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv  420 (451)
                      .++|...++||+|+||.||++.. .+++.||||++....   ....+.+.+|+.++.+++||||+++++++......++|
T Consensus        25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv  104 (484)
T 3nyv_A           25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV  104 (484)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence            34678889999999999999994 578999999996442   33467899999999999999999999999999999999


Q ss_pred             EeccCCCCHHHHHhccC
Q 013018          421 YEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       421 ~ey~~~GsL~~~L~~~~  437 (451)
                      +||+++|+|.+++....
T Consensus       105 ~e~~~~~~L~~~~~~~~  121 (484)
T 3nyv_A          105 GEVYTGGELFDEIISRK  121 (484)
T ss_dssp             ECCCCSCBHHHHHHTCS
T ss_pred             EecCCCCCHHHHHHhcC
Confidence            99999999999998644

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.14  E-value=6.3e-11  Score=115.18  Aligned_cols=91  Identities=21%  Similarity=0.378  Sum_probs=78.6

Q ss_pred             ccccccceecccCceeEEEEE-cCCCcEEEEEEeccCC---hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEE
Q 013018          346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSS---GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  421 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~  421 (451)
                      ++|...+.||+|+||.||++. ..+++.||||.+....   ......+.+|+.+++.++||||+++++++......++|+
T Consensus         9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~   88 (336)
T 3h4j_B            9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVI   88 (336)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            467889999999999999999 5678999999986432   122357899999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhccC
Q 013018          422 EFVPNKSLDYFLYAQS  437 (451)
Q Consensus       422 ey~~~GsL~~~L~~~~  437 (451)
                      ||+ +|+|.+++....
T Consensus        89 E~~-~g~l~~~l~~~~  103 (336)
T 3h4j_B           89 EYA-GGELFDYIVEKK  103 (336)
T ss_dssp             CCC-CEEHHHHHHHHC
T ss_pred             ECC-CCcHHHHHHHcC
Confidence            999 789999998654

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.14  E-value=1.4e-10  Score=112.08  Aligned_cols=92  Identities=32%  Similarity=0.554  Sum_probs=77.0

Q ss_pred             ccccccceecccCceeEEEEEc-CCCcE--EEEEEeccC-ChhhHHHHHHHHHHHhcC-CCCCcccceeEEEeCceeeEE
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVL-PSGQE--IAVKRLSRS-SGQGGQEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKILV  420 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l-~~g~~--vavK~l~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lv  420 (451)
                      ++|...+.||+|+||.||++.. .++..  +++|.+... .....+.+.+|+.++.++ +||||+++++++...+..++|
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv  104 (327)
T 1fvr_A           25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA  104 (327)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred             HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence            5678889999999999999994 45654  499988754 233446799999999999 899999999999999999999


Q ss_pred             EeccCCCCHHHHHhccC
Q 013018          421 YEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       421 ~ey~~~GsL~~~L~~~~  437 (451)
                      |||+++|+|.++++..+
T Consensus       105 ~e~~~~~~L~~~l~~~~  121 (327)
T 1fvr_A          105 IEYAPHGNLLDFLRKSR  121 (327)
T ss_dssp             ECCCTTCBHHHHHHTTC
T ss_pred             EecCCCCCHHHHHHhcc
Confidence            99999999999998754

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.14  E-value=8.5e-11  Score=120.40  Aligned_cols=92  Identities=24%  Similarity=0.311  Sum_probs=76.4

Q ss_pred             ccccccceecccCceeEEEEEc-CCCcEEEEEEeccCC--hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEe
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSS--GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  422 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  422 (451)
                      +.|...++||+|+||.||++.. ..+..+|||.+....  ......+.+|+.++++++||||+++++++......+||+|
T Consensus        37 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e  116 (494)
T 3lij_A           37 EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVME  116 (494)
T ss_dssp             HHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             cCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEe
Confidence            4578889999999999999994 578899999997542  2335779999999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhccC
Q 013018          423 FVPNKSLDYFLYAQS  437 (451)
Q Consensus       423 y~~~GsL~~~L~~~~  437 (451)
                      |+++|+|.+++....
T Consensus       117 ~~~~g~L~~~~~~~~  131 (494)
T 3lij_A          117 CYKGGELFDEIIHRM  131 (494)
T ss_dssp             CCCSCBHHHHHHHHS
T ss_pred             cCCCCcHHHHHHHcC
Confidence            999999999987653

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.13  E-value=9.9e-11  Score=112.70  Aligned_cols=91  Identities=29%  Similarity=0.496  Sum_probs=66.2

Q ss_pred             hccccccceecccCceeEEEEEc-CCCcEEEEEEeccCCh-hhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEe
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSG-QGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  422 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  422 (451)
                      .++|+..+.||+|+||.||++.. .+++.||+|.+..... ...+.+.+|+.++++++||||+++++++...+..+||+|
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   83 (317)
T 2pmi_A            4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE   83 (317)
T ss_dssp             ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred             ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence            35678889999999999999994 5689999999975432 234678999999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhcc
Q 013018          423 FVPNKSLDYFLYAQ  436 (451)
Q Consensus       423 y~~~GsL~~~L~~~  436 (451)
                      |++ |+|.+++...
T Consensus        84 ~~~-~~L~~~l~~~   96 (317)
T 2pmi_A           84 FMD-NDLKKYMDSR   96 (317)
T ss_dssp             CCC-CBHHHHHHHH
T ss_pred             ecC-CCHHHHHHhc
Confidence            998 6999999864

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.13  E-value=8.3e-11  Score=111.47  Aligned_cols=90  Identities=24%  Similarity=0.405  Sum_probs=78.6

Q ss_pred             ccccccceecccCceeEEEEEcCCCcEEEEEEeccCCh--hhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEec
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSG--QGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  423 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey  423 (451)
                      ++|...+.||+|+||.||++....++.+|+|++.....  ...+.+.+|+.++++++||||+++++++...+..++|+||
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH   81 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence            46788899999999999999987799999999965432  2246789999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcc
Q 013018          424 VPNKSLDYFLYAQ  436 (451)
Q Consensus       424 ~~~GsL~~~L~~~  436 (451)
                      +++ +|.+++...
T Consensus        82 ~~~-~l~~~~~~~   93 (288)
T 1ob3_A           82 LDQ-DLKKLLDVC   93 (288)
T ss_dssp             CSE-EHHHHHHTS
T ss_pred             cCC-CHHHHHHhc
Confidence            975 999999864

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.13  E-value=1.2e-10  Score=110.10  Aligned_cols=99  Identities=33%  Similarity=0.550  Sum_probs=79.9

Q ss_pred             hccccccceecccCceeEEEEEc-CCCcEEEEEEeccCChhh-------HHHHHHHHHHHhcCCCCCcccceeEEEeCce
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSGQG-------GQEFKNEVVLVAKLQHRNLVRLLGFCLEGEE  416 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~~~~-------~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~  416 (451)
                      .++|...+.||+|+||.||++.. .+++.||||.+.......       .+.+.+|+.++.+++||||+++++++.... 
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-   96 (287)
T 4f0f_A           18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP-   96 (287)
T ss_dssp             STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred             hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence            35678889999999999999994 578999999986442211       167999999999999999999999885543 


Q ss_pred             eeEEEeccCCCCHHHHHhccCCCCCCchhhh
Q 013018          417 KILVYEFVPNKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       417 ~~lv~ey~~~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                       ++|+||+++|+|.+++....  ..++|..+
T Consensus        97 -~lv~e~~~~~~L~~~l~~~~--~~~~~~~~  124 (287)
T 4f0f_A           97 -RMVMEFVPCGDLYHRLLDKA--HPIKWSVK  124 (287)
T ss_dssp             -EEEEECCTTCBHHHHHHCTT--SCCCHHHH
T ss_pred             -eEEEEecCCCCHHHHHhccc--CCccHHHH
Confidence             79999999999999998643  34666554

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.13  E-value=8.9e-11  Score=110.21  Aligned_cols=91  Identities=25%  Similarity=0.376  Sum_probs=80.0

Q ss_pred             ccccccceecccCceeEEEEEc-CCCcEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEec
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSS-GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  423 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey  423 (451)
                      ++|+..+.||+|+||.||++.. .+++.||||.+.... ....+.+.+|+.++.+++||||+++++++...+..++|+||
T Consensus         7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   86 (276)
T 2yex_A            7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY   86 (276)
T ss_dssp             HHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             cceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEe
Confidence            5688889999999999999994 478999999997543 33457899999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcc
Q 013018          424 VPNKSLDYFLYAQ  436 (451)
Q Consensus       424 ~~~GsL~~~L~~~  436 (451)
                      +++|+|.+++...
T Consensus        87 ~~~~~L~~~l~~~   99 (276)
T 2yex_A           87 CSGGELFDRIEPD   99 (276)
T ss_dssp             CTTEEGGGGSBTT
T ss_pred             cCCCcHHHHHhhc
Confidence            9999999998753

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.13  E-value=1.4e-10  Score=109.82  Aligned_cols=93  Identities=26%  Similarity=0.334  Sum_probs=81.4

Q ss_pred             hccccccceecccCceeEEEEEc-CCCcEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEE
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRS--SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  421 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~  421 (451)
                      .++|...+.||+|+||.||++.. .+++.||||.+...  .....+.+.+|+.++++++||||+++++++......++|+
T Consensus        21 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  100 (287)
T 2wei_A           21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG  100 (287)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEE
Confidence            35688899999999999999995 47899999998643  2334678999999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhccC
Q 013018          422 EFVPNKSLDYFLYAQS  437 (451)
Q Consensus       422 ey~~~GsL~~~L~~~~  437 (451)
                      ||+++++|.+++....
T Consensus       101 e~~~~~~L~~~l~~~~  116 (287)
T 2wei_A          101 ELYTGGELFDEIIKRK  116 (287)
T ss_dssp             CCCCSCBHHHHHHHHS
T ss_pred             EccCCCCHHHHHHhcC
Confidence            9999999999987643

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.13  E-value=1.9e-10  Score=111.26  Aligned_cols=90  Identities=26%  Similarity=0.259  Sum_probs=77.3

Q ss_pred             cceecccCceeEEEEEc-CCCcEEEEEEeccCChhhHHHHHHHHHHHhcCC-CCCcccceeEEEeCceeeEEEeccCCCC
Q 013018          351 DNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQ-HRNLVRLLGFCLEGEEKILVYEFVPNKS  428 (451)
Q Consensus       351 ~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~lv~ey~~~Gs  428 (451)
                      .+.||+|+||.||++.. .+++.||||++...   ....+.+|+.++.+++ ||||+++++++......+|||||+++|+
T Consensus        16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~   92 (325)
T 3kn6_A           16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGE   92 (325)
T ss_dssp             SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred             CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCc
Confidence            47899999999999994 56899999999643   3467889999999997 9999999999999999999999999999


Q ss_pred             HHHHHhccCCCCCCchhh
Q 013018          429 LDYFLYAQSPKNNNNWIG  446 (451)
Q Consensus       429 L~~~L~~~~~~~~l~W~~  446 (451)
                      |.++++....   +++.+
T Consensus        93 L~~~l~~~~~---~~~~~  107 (325)
T 3kn6_A           93 LFERIKKKKH---FSETE  107 (325)
T ss_dssp             HHHHHHHCSC---CCHHH
T ss_pred             HHHHHHhcCC---CCHHH
Confidence            9999987532   55543

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.13  E-value=1.3e-10  Score=120.52  Aligned_cols=101  Identities=25%  Similarity=0.340  Sum_probs=84.2

Q ss_pred             hccccccceecccCceeEEEEEc-CCCcEEEEEEeccCC---hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEE
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSS---GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILV  420 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv  420 (451)
                      .++|...++||+|+||.||++.. .+|+.||||++....   ......+.+|+.+|.+++||||+++++++...+..+||
T Consensus       183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV  262 (576)
T 2acx_A          183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV  262 (576)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence            45688889999999999999994 579999999996432   23346789999999999999999999999999999999


Q ss_pred             EeccCCCCHHHHHhccCCCCCCchhh
Q 013018          421 YEFVPNKSLDYFLYAQSPKNNNNWIG  446 (451)
Q Consensus       421 ~ey~~~GsL~~~L~~~~~~~~l~W~~  446 (451)
                      |||+++|+|.++|..... ..+++..
T Consensus       263 mEy~~gg~L~~~l~~~~~-~~l~e~~  287 (576)
T 2acx_A          263 LTLMNGGDLKFHIYHMGQ-AGFPEAR  287 (576)
T ss_dssp             ECCCCSCBHHHHHHSSSS-CCCCHHH
T ss_pred             EEcCCCCcHHHHHHhcCC-CCCCHHH
Confidence            999999999999986432 2355543

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.13  E-value=9.7e-11  Score=113.36  Aligned_cols=94  Identities=27%  Similarity=0.472  Sum_probs=78.1

Q ss_pred             HhhccccccceecccCceeEEEEE-cCCCcEEEEEEeccCCh--hhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeE
Q 013018          343 VATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSG--QGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKIL  419 (451)
Q Consensus       343 ~~~~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l  419 (451)
                      ...++|...++||+|+||.||++. ..+++.||||++.....  ...+.+.+|+.++.+++||||+++++++...+..+|
T Consensus        31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  110 (329)
T 3gbz_A           31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHL  110 (329)
T ss_dssp             -CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEE
T ss_pred             cchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEE
Confidence            345678899999999999999998 56789999999975432  224578899999999999999999999999999999


Q ss_pred             EEeccCCCCHHHHHhccC
Q 013018          420 VYEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       420 v~ey~~~GsL~~~L~~~~  437 (451)
                      |+||++ |+|.+++....
T Consensus       111 v~e~~~-~~L~~~~~~~~  127 (329)
T 3gbz_A          111 IFEYAE-NDLKKYMDKNP  127 (329)
T ss_dssp             EEECCS-EEHHHHHHHCT
T ss_pred             EEecCC-CCHHHHHhhcC
Confidence            999997 59999998754

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.13  E-value=1.7e-10  Score=109.41  Aligned_cols=89  Identities=26%  Similarity=0.454  Sum_probs=75.9

Q ss_pred             ccccccceecccCceeEEEEEc-CCCcEEEEEEeccCC--hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEe
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSS--GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  422 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  422 (451)
                      ++|...++||+|+||.||++.. .+++.||||++....  ......+.+|+.++.+++||||+++++++...+..+||+|
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   81 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence            4678889999999999999994 568999999997542  2334778999999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhc
Q 013018          423 FVPNKSLDYFLYA  435 (451)
Q Consensus       423 y~~~GsL~~~L~~  435 (451)
                      |+++ +|.+++..
T Consensus        82 ~~~~-~l~~~~~~   93 (292)
T 3o0g_A           82 FCDQ-DLKKYFDS   93 (292)
T ss_dssp             CCSE-EHHHHHHH
T ss_pred             cCCC-CHHHHHHh
Confidence            9975 66666654

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.12  E-value=6.2e-11  Score=112.90  Aligned_cols=90  Identities=21%  Similarity=0.321  Sum_probs=72.5

Q ss_pred             hccccccceecccCceeEEEEE-cCCCcEEEEEEeccCCh--------------------------hhHHHHHHHHHHHh
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSG--------------------------QGGQEFKNEVVLVA  397 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~--------------------------~~~~~~~~E~~~l~  397 (451)
                      .++|...+.||+|+||.||++. ..+++.||||.+.....                          ...+.+.+|+.+++
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~   91 (298)
T 2zv2_A           12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK   91 (298)
T ss_dssp             ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred             ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence            3568889999999999999998 45789999999865421                          11256899999999


Q ss_pred             cCCCCCcccceeEEEe--CceeeEEEeccCCCCHHHHHh
Q 013018          398 KLQHRNLVRLLGFCLE--GEEKILVYEFVPNKSLDYFLY  434 (451)
Q Consensus       398 ~l~h~niv~l~g~~~~--~~~~~lv~ey~~~GsL~~~L~  434 (451)
                      +++||||+++++++..  .+..++||||+++|+|.+++.
T Consensus        92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~  130 (298)
T 2zv2_A           92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT  130 (298)
T ss_dssp             TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC
T ss_pred             hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh
Confidence            9999999999999886  567899999999999987654

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.12  E-value=7.8e-11  Score=114.26  Aligned_cols=101  Identities=26%  Similarity=0.471  Sum_probs=82.4

Q ss_pred             hccccccceecccCceeEEEEEcCC-----CcEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceee
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGVLPS-----GQEIAVKRLSRSS-GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKI  418 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~l~~-----g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~  418 (451)
                      .++|...+.||+|+||.||+|....     +..||||.+.... ......+.+|+.++.+++||||+++++++...+..+
T Consensus        43 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  122 (333)
T 1mqb_A           43 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMM  122 (333)
T ss_dssp             TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEE
T ss_pred             hHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcE
Confidence            3456778999999999999998532     2369999997543 334567999999999999999999999999888999


Q ss_pred             EEEeccCCCCHHHHHhccCCCCCCchhhh
Q 013018          419 LVYEFVPNKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       419 lv~ey~~~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                      ||+||+++|+|.++++...  ..++|.+.
T Consensus       123 lv~e~~~~~~L~~~l~~~~--~~~~~~~~  149 (333)
T 1mqb_A          123 IITEYMENGALDKFLREKD--GEFSVLQL  149 (333)
T ss_dssp             EEEECCTTEEHHHHHHHTT--TCSCHHHH
T ss_pred             EEEeCCCCCcHHHHHHhCC--CCCCHHHH
Confidence            9999999999999998643  23555544

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.12  E-value=8e-11  Score=117.00  Aligned_cols=94  Identities=17%  Similarity=0.225  Sum_probs=79.0

Q ss_pred             hhccccccceecccCceeEEEEEc-CCCcEEEEEEeccCC---hhhHHHHHHHHHHHhcC-CCCCcccceeEEEeCceee
Q 013018          344 ATNNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSS---GQGGQEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKI  418 (451)
Q Consensus       344 ~~~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~  418 (451)
                      ..++|...++||+|+||.||++.. .+++.+|||++....   ....+.+.+|..++.++ +||||+++++++...+..+
T Consensus        50 ~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~  129 (396)
T 4dc2_A           50 GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLF  129 (396)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred             ChhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEE
Confidence            345788899999999999999994 568899999997542   22234688999999887 8999999999999999999


Q ss_pred             EEEeccCCCCHHHHHhccC
Q 013018          419 LVYEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       419 lv~ey~~~GsL~~~L~~~~  437 (451)
                      |||||+++|+|.+++...+
T Consensus       130 lV~E~~~gg~L~~~l~~~~  148 (396)
T 4dc2_A          130 FVIEYVNGGDLMFHMQRQR  148 (396)
T ss_dssp             EEEECCTTCBHHHHHHHHS
T ss_pred             EEEEcCCCCcHHHHHHHcC
Confidence            9999999999999998643

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.12  E-value=1.8e-10  Score=109.50  Aligned_cols=96  Identities=21%  Similarity=0.339  Sum_probs=76.8

Q ss_pred             hccccccceecccCceeEEEEEcCCCcEEEEEEeccCChhhHHHHHHHHHHHhc--CCCCCcccceeEEEeC----ceee
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAK--LQHRNLVRLLGFCLEG----EEKI  418 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~g~~~~~----~~~~  418 (451)
                      .++|...+.||+|+||.||++.. +++.||||++...   ....+.+|.+++..  ++||||+++++++...    ...+
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~   82 (301)
T 3q4u_A            7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLW   82 (301)
T ss_dssp             GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred             cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeE
Confidence            45688899999999999999998 7899999998643   33556666666665  7999999999987652    4578


Q ss_pred             EEEeccCCCCHHHHHhccCCCCCCchhhhh
Q 013018          419 LVYEFVPNKSLDYFLYAQSPKNNNNWIGQD  448 (451)
Q Consensus       419 lv~ey~~~GsL~~~L~~~~~~~~l~W~~r~  448 (451)
                      +|+||+++|+|.++++..    .++|.+++
T Consensus        83 lv~e~~~~g~L~~~l~~~----~~~~~~~~  108 (301)
T 3q4u_A           83 LITHYHEMGSLYDYLQLT----TLDTVSCL  108 (301)
T ss_dssp             EEECCCTTCBHHHHHTTC----CBCHHHHH
T ss_pred             EehhhccCCCHHHHHhhc----ccCHHHHH
Confidence            999999999999999653    36665543

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.12  E-value=7.2e-11  Score=114.10  Aligned_cols=106  Identities=26%  Similarity=0.325  Sum_probs=86.3

Q ss_pred             HHhhccccccceecccCceeEEEEE-cCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCC-CCCcccceeEEEe------
Q 013018          342 EVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQ-HRNLVRLLGFCLE------  413 (451)
Q Consensus       342 ~~~~~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~------  413 (451)
                      +....+|...++||+|+||.||++. ..+++.||||++........+.+.+|+.++.++. ||||+++++++..      
T Consensus        24 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~  103 (337)
T 3ll6_A           24 ELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESD  103 (337)
T ss_dssp             EETTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTST
T ss_pred             eccCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccc
Confidence            3445578889999999999999999 4578999999997766666678999999999996 9999999999842      


Q ss_pred             --CceeeEEEeccCCCCHHHHHhccCCCCCCchhhhh
Q 013018          414 --GEEKILVYEFVPNKSLDYFLYAQSPKNNNNWIGQD  448 (451)
Q Consensus       414 --~~~~~lv~ey~~~GsL~~~L~~~~~~~~l~W~~r~  448 (451)
                        ....++++||++ |+|.++++.......++|.+..
T Consensus       104 ~~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~  139 (337)
T 3ll6_A          104 TGQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVL  139 (337)
T ss_dssp             TSSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHH
T ss_pred             cCCceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHH
Confidence              345789999995 8999999875444557776544

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.12  E-value=1.4e-10  Score=110.12  Aligned_cols=92  Identities=25%  Similarity=0.396  Sum_probs=78.5

Q ss_pred             hccccccceecccCceeEEEEE-cCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEe----------
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLE----------  413 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~----------  413 (451)
                      .++|...+.||+|+||.||++. ..+++.||||.+... ....+.+.+|+.++.+++||||+++++++..          
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~   83 (303)
T 1zy4_A            5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA   83 (303)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC----
T ss_pred             cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcc
Confidence            3568888999999999999999 457899999999643 3445789999999999999999999998765          


Q ss_pred             ---CceeeEEEeccCCCCHHHHHhccC
Q 013018          414 ---GEEKILVYEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       414 ---~~~~~lv~ey~~~GsL~~~L~~~~  437 (451)
                         ....++|+||+++|+|.++++...
T Consensus        84 ~~~~~~~~lv~e~~~~~~L~~~l~~~~  110 (303)
T 1zy4_A           84 VKKKSTLFIQMEYCENGTLYDLIHSEN  110 (303)
T ss_dssp             --CEEEEEEEEECCCSCBHHHHHHHSC
T ss_pred             cccCCceEEEEecCCCCCHHHhhhccc
Confidence               356789999999999999998643

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.12  E-value=8.1e-11  Score=117.97  Aligned_cols=99  Identities=17%  Similarity=0.287  Sum_probs=79.3

Q ss_pred             hhccccccceecccCceeEEEEE-cCCCcEEEEEEeccCC--------hhhHHHHHHHHHHHhcCCCCCcccceeEEEeC
Q 013018          344 ATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSS--------GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEG  414 (451)
Q Consensus       344 ~~~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~--------~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~  414 (451)
                      ..++|...+.||+|+||.||++. ..+++.||||.+....        ......+.+|+.+|++++||||+++++++. .
T Consensus       133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-~  211 (419)
T 3i6u_A          133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-A  211 (419)
T ss_dssp             HHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-S
T ss_pred             hhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-c
Confidence            45678899999999999999998 5568999999986432        111235889999999999999999999974 5


Q ss_pred             ceeeEEEeccCCCCHHHHHhccCCCCCCchhh
Q 013018          415 EEKILVYEFVPNKSLDYFLYAQSPKNNNNWIG  446 (451)
Q Consensus       415 ~~~~lv~ey~~~GsL~~~L~~~~~~~~l~W~~  446 (451)
                      +..++||||+++|+|.+++.....   ++|.+
T Consensus       212 ~~~~lv~e~~~~g~L~~~l~~~~~---~~~~~  240 (419)
T 3i6u_A          212 EDYYIVLELMEGGELFDKVVGNKR---LKEAT  240 (419)
T ss_dssp             SEEEEEEECCTTCBGGGGTSSSCC---CCHHH
T ss_pred             CceEEEEEcCCCCcHHHHHhccCC---CCHHH
Confidence            568999999999999999876433   55543

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.12  E-value=1.2e-10  Score=110.14  Aligned_cols=93  Identities=25%  Similarity=0.421  Sum_probs=80.2

Q ss_pred             hccccccceecccCceeEEEEEc-CCCcEEEEEEeccCC---hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEE
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSS---GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILV  420 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv  420 (451)
                      .++|...+.||+|+||.||++.. .+++.||||.+....   ....+.+.+|+.++.+++||||+++++++...+..++|
T Consensus        13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   92 (284)
T 2vgo_A           13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM   92 (284)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEE
Confidence            35688889999999999999994 467899999986432   12346799999999999999999999999999999999


Q ss_pred             EeccCCCCHHHHHhccC
Q 013018          421 YEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       421 ~ey~~~GsL~~~L~~~~  437 (451)
                      +||+++|+|.+++....
T Consensus        93 ~e~~~~~~L~~~l~~~~  109 (284)
T 2vgo_A           93 LEFAPRGELYKELQKHG  109 (284)
T ss_dssp             ECCCTTEEHHHHHHHHS
T ss_pred             EEeCCCCcHHHHHHhcC
Confidence            99999999999998653

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.11  E-value=1e-10  Score=119.51  Aligned_cols=92  Identities=26%  Similarity=0.335  Sum_probs=80.6

Q ss_pred             ccccccceecccCceeEEEEEc-CCCcEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEe
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRS--SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  422 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  422 (451)
                      ++|...++||+|+||.||++.. .+++.||||++...  .......+.+|+.++.+++||||+++++++......++|+|
T Consensus        22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e  101 (486)
T 3mwu_A           22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGE  101 (486)
T ss_dssp             HHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             cceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEE
Confidence            4688899999999999999994 57899999998643  22345789999999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhccC
Q 013018          423 FVPNKSLDYFLYAQS  437 (451)
Q Consensus       423 y~~~GsL~~~L~~~~  437 (451)
                      |+++|+|.+++....
T Consensus       102 ~~~~~~L~~~~~~~~  116 (486)
T 3mwu_A          102 LYTGGELFDEIIKRK  116 (486)
T ss_dssp             CCCSCBHHHHHHHHS
T ss_pred             cCCCCcHHHHHHhcC
Confidence            999999999987643

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.11  E-value=1.8e-10  Score=111.50  Aligned_cols=99  Identities=27%  Similarity=0.398  Sum_probs=82.3

Q ss_pred             hccccccceecccCceeEEEEEc-CCCcEEEEEEeccCCh--hhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEE
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSG--QGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  421 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~  421 (451)
                      .++|...+.||+|+||.||++.. .+++.||||++.....  ...+.+.+|+.++.+++||||+++++++...+..++|+
T Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~  103 (331)
T 4aaa_A           24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVF  103 (331)
T ss_dssp             GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEE
Confidence            35678889999999999999994 4689999999865432  23466889999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhccCCCCCCchhh
Q 013018          422 EFVPNKSLDYFLYAQSPKNNNNWIG  446 (451)
Q Consensus       422 ey~~~GsL~~~L~~~~~~~~l~W~~  446 (451)
                      ||+++++|.+++.....   ++|..
T Consensus       104 e~~~~~~l~~~~~~~~~---~~~~~  125 (331)
T 4aaa_A          104 EFVDHTILDDLELFPNG---LDYQV  125 (331)
T ss_dssp             ECCSEEHHHHHHHSTTC---CCHHH
T ss_pred             ecCCcchHHHHHhhccC---CCHHH
Confidence            99999999988775432   55543

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.11  E-value=1e-10  Score=110.96  Aligned_cols=93  Identities=28%  Similarity=0.461  Sum_probs=76.3

Q ss_pred             hhccccccc-eecccCceeEEEEEc---CCCcEEEEEEeccCC--hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCcee
Q 013018          344 ATNNFSTDN-KLGEGGFGEVYKGVL---PSGQEIAVKRLSRSS--GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEK  417 (451)
Q Consensus       344 ~~~~~~~~~-~lG~G~fg~V~~~~l---~~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~  417 (451)
                      ..++|...+ .||+|+||.||++..   ..+..||||.+....  ....+++.+|+.++.+++||||+++++++ ..+..
T Consensus        14 ~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~   92 (291)
T 1xbb_A           14 DRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESW   92 (291)
T ss_dssp             CGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSE
T ss_pred             cchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCc
Confidence            445677777 999999999999963   346789999997543  22357899999999999999999999998 56778


Q ss_pred             eEEEeccCCCCHHHHHhccC
Q 013018          418 ILVYEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       418 ~lv~ey~~~GsL~~~L~~~~  437 (451)
                      ++|+||+++|+|.++++...
T Consensus        93 ~lv~e~~~~~~L~~~l~~~~  112 (291)
T 1xbb_A           93 MLVMEMAELGPLNKYLQQNR  112 (291)
T ss_dssp             EEEEECCTTEEHHHHHHHCT
T ss_pred             EEEEEeCCCCCHHHHHHhCc
Confidence            99999999999999998743

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.11  E-value=1.5e-10  Score=113.25  Aligned_cols=110  Identities=22%  Similarity=0.245  Sum_probs=88.9

Q ss_pred             ccccChHHHHHhhccccccceecccCceeEEEEEc-CCCcEEEEEEeccCChhhHHHHHHHHHHHhcCC-----CCCccc
Q 013018          333 SLQFDFETIEVATNNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQ-----HRNLVR  406 (451)
Q Consensus       333 ~~~~~~~~l~~~~~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-----h~niv~  406 (451)
                      ...+.+.+.....++|...++||+|+||.||++.. .+++.||||.+... ....+.+..|+.++.+++     ||||++
T Consensus        22 ~~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~  100 (360)
T 3llt_A           22 IVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVK  100 (360)
T ss_dssp             GGSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCC
T ss_pred             ceeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeec
Confidence            33455555556677899999999999999999994 67899999999643 334467888999999886     999999


Q ss_pred             ceeEEEeCceeeEEEeccCCCCHHHHHhccCCCCCCchh
Q 013018          407 LLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPKNNNNWI  445 (451)
Q Consensus       407 l~g~~~~~~~~~lv~ey~~~GsL~~~L~~~~~~~~l~W~  445 (451)
                      +++++...+..+|||||+ +|+|.+++..... ..+++.
T Consensus       101 ~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~-~~~~~~  137 (360)
T 3llt_A          101 YHGKFMYYDHMCLIFEPL-GPSLYEIITRNNY-NGFHIE  137 (360)
T ss_dssp             EEEEEEETTEEEEEECCC-CCBHHHHHHHTTT-CCCCHH
T ss_pred             ccceeeECCeeEEEEcCC-CCCHHHHHHhcCC-CCCCHH
Confidence            999999999999999999 9999999987543 224444

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.10  E-value=1.8e-10  Score=118.75  Aligned_cols=102  Identities=25%  Similarity=0.319  Sum_probs=84.6

Q ss_pred             hccccccceecccCceeEEEEEc-CCCcEEEEEEeccCC---hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEE
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSS---GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILV  420 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv  420 (451)
                      .++|...++||+|+||.||++.. .+|+.||+|++....   ....+.+.+|+.++.+++||||+++++++......+||
T Consensus       184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV  263 (543)
T 3c4z_A          184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV  263 (543)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence            35678889999999999999995 568999999996432   22346789999999999999999999999999999999


Q ss_pred             EeccCCCCHHHHHhccCC-CCCCchhh
Q 013018          421 YEFVPNKSLDYFLYAQSP-KNNNNWIG  446 (451)
Q Consensus       421 ~ey~~~GsL~~~L~~~~~-~~~l~W~~  446 (451)
                      |||+++|+|.++|..... ...+++..
T Consensus       264 mE~~~gg~L~~~l~~~~~~~~~l~e~~  290 (543)
T 3c4z_A          264 MTIMNGGDIRYHIYNVDEDNPGFQEPR  290 (543)
T ss_dssp             ECCCTTCBHHHHHHTSSTTSCSCCHHH
T ss_pred             EEeccCCCHHHHHHHhhcccccccHHH
Confidence            999999999999987542 23355543

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.10  E-value=1.4e-10  Score=122.34  Aligned_cols=92  Identities=27%  Similarity=0.397  Sum_probs=76.0

Q ss_pred             ceecccCceeEEEEEc---CCCcEEEEEEeccCC--hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEeccCC
Q 013018          352 NKLGEGGFGEVYKGVL---PSGQEIAVKRLSRSS--GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPN  426 (451)
Q Consensus       352 ~~lG~G~fg~V~~~~l---~~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~~~  426 (451)
                      ++||+|+||.||+|.+   ..+..||||+++...  ....++|.+|+.+|.+++|||||++++++. .+..+|||||+++
T Consensus       375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-~~~~~lv~E~~~~  453 (635)
T 4fl3_A          375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAEL  453 (635)
T ss_dssp             EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSSEEEEEECCTT
T ss_pred             CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCCEEEEEEccCC
Confidence            4799999999999964   346789999997542  234578999999999999999999999985 4568899999999


Q ss_pred             CCHHHHHhccCCCCCCchhhh
Q 013018          427 KSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       427 GsL~~~L~~~~~~~~l~W~~r  447 (451)
                      |+|.++|+...   .++|.++
T Consensus       454 g~L~~~l~~~~---~l~~~~~  471 (635)
T 4fl3_A          454 GPLNKYLQQNR---HVKDKNI  471 (635)
T ss_dssp             EEHHHHHHHCT---TCCHHHH
T ss_pred             CCHHHHHhhCC---CCCHHHH
Confidence            99999998643   3566554

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.10  E-value=9.5e-11  Score=115.11  Aligned_cols=104  Identities=18%  Similarity=0.193  Sum_probs=84.2

Q ss_pred             HHhhccccccceecccCceeEEEEE------cCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCC---CCCcccceeEEE
Q 013018          342 EVATNNFSTDNKLGEGGFGEVYKGV------LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQ---HRNLVRLLGFCL  412 (451)
Q Consensus       342 ~~~~~~~~~~~~lG~G~fg~V~~~~------l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~g~~~  412 (451)
                      +...++|...++||+|+||.||++.      ...++.||||.+....   ..++.+|+.++.+++   |+||+++++.+.
T Consensus        61 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~  137 (365)
T 3e7e_A           61 QLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN---PWEFYIGTQLMERLKPSMQHMFMKFYSAHL  137 (365)
T ss_dssp             ECSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC---HHHHHHHHHHHHHSCGGGGGGBCCEEEEEE
T ss_pred             EECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC---hhHHHHHHHHHHHhhhhhhhhhhhhheeee
Confidence            3455678889999999999999994      4568899999997553   457788888888886   999999999999


Q ss_pred             eCceeeEEEeccCCCCHHHHHhccC--CCCCCchhhhh
Q 013018          413 EGEEKILVYEFVPNKSLDYFLYAQS--PKNNNNWIGQD  448 (451)
Q Consensus       413 ~~~~~~lv~ey~~~GsL~~~L~~~~--~~~~l~W~~r~  448 (451)
                      ..+..+|||||+++|+|.++|+..+  ....++|.++.
T Consensus       138 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~  175 (365)
T 3e7e_A          138 FQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVI  175 (365)
T ss_dssp             CSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHH
T ss_pred             cCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHH
Confidence            9999999999999999999998633  23457776554

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.10  E-value=2.1e-10  Score=110.14  Aligned_cols=100  Identities=28%  Similarity=0.205  Sum_probs=80.6

Q ss_pred             ccccccceecccCceeEEEEEc-CCCcEEEEEEeccC--ChhhHHHHHHHHHHHhcC-CCCCcccceeEEEeCceeeEEE
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRS--SGQGGQEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKILVY  421 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lv~  421 (451)
                      ++|+..++||+|+||.||++.. .+++.||||++...  .......+..|+..+.++ +||||+++++++...+..+|||
T Consensus        57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~  136 (311)
T 3p1a_A           57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT  136 (311)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence            5688899999999999999995 47899999998653  233345566676666655 8999999999999999999999


Q ss_pred             eccCCCCHHHHHhccCCCCCCchhhhh
Q 013018          422 EFVPNKSLDYFLYAQSPKNNNNWIGQD  448 (451)
Q Consensus       422 ey~~~GsL~~~L~~~~~~~~l~W~~r~  448 (451)
                      ||+ +|+|.+++....  ..++|.++.
T Consensus       137 e~~-~~~L~~~~~~~~--~~l~~~~~~  160 (311)
T 3p1a_A          137 ELC-GPSLQQHCEAWG--ASLPEAQVW  160 (311)
T ss_dssp             ECC-CCBHHHHHHHHC--SCCCHHHHH
T ss_pred             ecc-CCCHHHHHHhcC--CCCCHHHHH
Confidence            999 779999998753  347777654

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.10  E-value=5.4e-11  Score=115.82  Aligned_cols=101  Identities=19%  Similarity=0.244  Sum_probs=83.5

Q ss_pred             hccccccceecccCceeEEEEEcCCCcEEEEEEeccCChhh-----------------HHHHHHHHHHHhcCCCCCcccc
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQG-----------------GQEFKNEVVLVAKLQHRNLVRL  407 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~~~~-----------------~~~~~~E~~~l~~l~h~niv~l  407 (451)
                      .++|...+.||+|+||.||++.. +++.||||.+.......                 .+.+.+|+.++.+++||||+++
T Consensus        30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~  108 (348)
T 2pml_X           30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC  108 (348)
T ss_dssp             ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred             cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence            35688899999999999999999 89999999986432111                 1789999999999999999999


Q ss_pred             eeEEEeCceeeEEEeccCCCCHHHH------HhccCCCCCCchhhh
Q 013018          408 LGFCLEGEEKILVYEFVPNKSLDYF------LYAQSPKNNNNWIGQ  447 (451)
Q Consensus       408 ~g~~~~~~~~~lv~ey~~~GsL~~~------L~~~~~~~~l~W~~r  447 (451)
                      ++++...+..++||||+++|+|.++      +... ....++|...
T Consensus       109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~-~~~~~~~~~~  153 (348)
T 2pml_X          109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKN-YTCFIPIQVI  153 (348)
T ss_dssp             SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSS-SCCCCCHHHH
T ss_pred             EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhc-cccCCCHHHH
Confidence            9999999999999999999999998      5432 1234666544

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.09  E-value=2e-10  Score=112.44  Aligned_cols=107  Identities=18%  Similarity=0.238  Sum_probs=86.1

Q ss_pred             hHHHHHhhccccccceecccCceeEEEEEcCCCcEEEEEEeccCCh-----------hhHHHHHHHHHHHhcCCCCCccc
Q 013018          338 FETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSG-----------QGGQEFKNEVVLVAKLQHRNLVR  406 (451)
Q Consensus       338 ~~~l~~~~~~~~~~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~~-----------~~~~~~~~E~~~l~~l~h~niv~  406 (451)
                      ..++....++|...+.||+|+||.||++...++..||||++.....           ...+.+.+|+.++.+++||||++
T Consensus        14 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~   93 (362)
T 3pg1_A           14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILG   93 (362)
T ss_dssp             HHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             HHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccc
Confidence            4567778889999999999999999999977899999999854311           12367999999999999999999


Q ss_pred             ceeEEEeC-----ceeeEEEeccCCCCHHHHHhccCCCCCCchhhh
Q 013018          407 LLGFCLEG-----EEKILVYEFVPNKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       407 l~g~~~~~-----~~~~lv~ey~~~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                      +++++...     ...++|+||++ |+|.+++....  ..++|...
T Consensus        94 ~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~--~~~~~~~~  136 (362)
T 3pg1_A           94 LRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQR--IVISPQHI  136 (362)
T ss_dssp             CSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTT--SCCCHHHH
T ss_pred             eeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcc--cCCCHHHH
Confidence            99998653     25799999997 79999988543  23555443

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.09  E-value=1.4e-10  Score=109.23  Aligned_cols=97  Identities=24%  Similarity=0.376  Sum_probs=79.7

Q ss_pred             ccccccceecccCceeEEEEEc-CCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEe-----------
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLE-----------  413 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~-----------  413 (451)
                      ++|...+.||+|+||.||++.. .+++.||+|.+....    +.+.+|+.++.+++||||+++++++..           
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~   86 (284)
T 2a19_B           11 MDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKN   86 (284)
T ss_dssp             HHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-------
T ss_pred             cccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccccc
Confidence            4578889999999999999995 478999999997553    357789999999999999999998754           


Q ss_pred             -----CceeeEEEeccCCCCHHHHHhccCCCCCCchhhh
Q 013018          414 -----GEEKILVYEFVPNKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       414 -----~~~~~lv~ey~~~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                           ....++|+||+++|+|.+++..... ..++|..+
T Consensus        87 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~  124 (284)
T 2a19_B           87 SSRSKTKCLFIQMEFCDKGTLEQWIEKRRG-EKLDKVLA  124 (284)
T ss_dssp             --CCEEEEEEEEECCCCSCBHHHHHHHGGG-SCCCHHHH
T ss_pred             ccccCcceEEEEEeccCCCCHHHHHhhccC-CCCCHHHH
Confidence                 3457899999999999999986432 34666544

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.09  E-value=3.2e-10  Score=107.62  Aligned_cols=98  Identities=28%  Similarity=0.391  Sum_probs=78.4

Q ss_pred             ccccceecccCceeEEEEEc-CCC---cEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCcee-eEEE
Q 013018          348 FSTDNKLGEGGFGEVYKGVL-PSG---QEIAVKRLSRSS-GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEK-ILVY  421 (451)
Q Consensus       348 ~~~~~~lG~G~fg~V~~~~l-~~g---~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-~lv~  421 (451)
                      +...++||+|+||.||++.. .++   ..+|+|.+.... ....+.+.+|+.++++++||||+++++++...+.. ++|+
T Consensus        23 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~  102 (298)
T 3pls_A           23 THSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLL  102 (298)
T ss_dssp             EEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEE
T ss_pred             EccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEE
Confidence            45568999999999999984 232   379999997543 34457899999999999999999999999876655 8999


Q ss_pred             eccCCCCHHHHHhccCCCCCCchhhh
Q 013018          422 EFVPNKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       422 ey~~~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                      ||+.+|+|.++++...  ..++|.++
T Consensus       103 e~~~~~~L~~~~~~~~--~~~~~~~~  126 (298)
T 3pls_A          103 PYMCHGDLLQFIRSPQ--RNPTVKDL  126 (298)
T ss_dssp             CCCTTCBHHHHHHCTT--CCCBHHHH
T ss_pred             ecccCCCHHHHHhccc--cCCCHHHH
Confidence            9999999999998643  23555443

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.09  E-value=1.6e-10  Score=113.17  Aligned_cols=94  Identities=21%  Similarity=0.203  Sum_probs=80.4

Q ss_pred             hhccccccceecccCceeEEEEEcC-CCcEEEEEEeccCC---hhhHHHHHHHHHHHhcC-CCCCcccceeEEEeCceee
Q 013018          344 ATNNFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSRSS---GQGGQEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKI  418 (451)
Q Consensus       344 ~~~~~~~~~~lG~G~fg~V~~~~l~-~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~  418 (451)
                      ..++|...++||+|+||.||++... +++.||||++....   ....+.+.+|..++..+ +||||+++.+++...+..+
T Consensus        18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~   97 (353)
T 2i0e_A           18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY   97 (353)
T ss_dssp             -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred             chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence            4567888999999999999999954 57899999997542   23456788999999988 8999999999999999999


Q ss_pred             EEEeccCCCCHHHHHhccC
Q 013018          419 LVYEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       419 lv~ey~~~GsL~~~L~~~~  437 (451)
                      |||||+++|+|.++|+...
T Consensus        98 lv~E~~~gg~L~~~l~~~~  116 (353)
T 2i0e_A           98 FVMEYVNGGDLMYHIQQVG  116 (353)
T ss_dssp             EEEECCCSCBHHHHHHHHS
T ss_pred             EEEeCCCCCcHHHHHHhcC
Confidence            9999999999999998643

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.09  E-value=1.2e-10  Score=112.51  Aligned_cols=99  Identities=29%  Similarity=0.520  Sum_probs=75.6

Q ss_pred             ccccccceecccCceeEEEEEc-CCCc----EEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeE
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVL-PSGQ----EIAVKRLSRS-SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKIL  419 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l-~~g~----~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l  419 (451)
                      ++|+..++||+|+||.||+|.. .+++    .|++|.+... .....++|.+|+.++++++||||+++++++... ..++
T Consensus        15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~~~   93 (327)
T 3poz_A           15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL   93 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESS-SEEE
T ss_pred             HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecC-CeEE
Confidence            4678889999999999999994 3444    4688888643 334557899999999999999999999999865 4779


Q ss_pred             EEeccCCCCHHHHHhccCCCCCCchhhh
Q 013018          420 VYEFVPNKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       420 v~ey~~~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                      |+||+++|+|.++++....  .++|...
T Consensus        94 v~e~~~~g~L~~~l~~~~~--~~~~~~~  119 (327)
T 3poz_A           94 ITQLMPFGCLLDYVREHKD--NIGSQYL  119 (327)
T ss_dssp             EEECCTTCBHHHHHHHSTT--SCCHHHH
T ss_pred             EEEecCCCcHHHHHHhcCC--CCCHHHH
Confidence            9999999999999987543  3555443

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.08  E-value=1.1e-10  Score=115.17  Aligned_cols=98  Identities=28%  Similarity=0.475  Sum_probs=78.1

Q ss_pred             ccccceecccCceeEEEEEcC--CC--cEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCcccceeEEEe-CceeeEEE
Q 013018          348 FSTDNKLGEGGFGEVYKGVLP--SG--QEIAVKRLSRS-SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLE-GEEKILVY  421 (451)
Q Consensus       348 ~~~~~~lG~G~fg~V~~~~l~--~g--~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~~lv~  421 (451)
                      |...+.||+|+||.||+|...  ++  ..||||.+... .....++|.+|+.++++++||||+++++++.. .+..++|+
T Consensus        91 ~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~  170 (373)
T 3c1x_A           91 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL  170 (373)
T ss_dssp             EEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEE
T ss_pred             eecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEE
Confidence            556789999999999999853  22  36899998754 33456789999999999999999999999765 45788999


Q ss_pred             eccCCCCHHHHHhccCCCCCCchhhh
Q 013018          422 EFVPNKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       422 ey~~~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                      ||+++|+|.++|+....  .++|...
T Consensus       171 e~~~~g~L~~~l~~~~~--~~~~~~~  194 (373)
T 3c1x_A          171 PYMKHGDLRNFIRNETH--NPTVKDL  194 (373)
T ss_dssp             ECCTTCBHHHHHHCTTC--CCBHHHH
T ss_pred             ECCCCCCHHHHHhhccc--CCCHHHH
Confidence            99999999999986432  3455443

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.08  E-value=3.9e-10  Score=110.85  Aligned_cols=102  Identities=16%  Similarity=0.228  Sum_probs=83.9

Q ss_pred             HHhhccccccceecccCceeEEEEEc-CCCcEEEEEEeccCCh--------hhHHHHHHHHHHHhcC-CCCCcccceeEE
Q 013018          342 EVATNNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSG--------QGGQEFKNEVVLVAKL-QHRNLVRLLGFC  411 (451)
Q Consensus       342 ~~~~~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~~--------~~~~~~~~E~~~l~~l-~h~niv~l~g~~  411 (451)
                      ....++|...+.||+|+||.||++.. .+|+.||||++.....        ...+.+.+|+.++.++ +||||+++++++
T Consensus        90 ~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~  169 (365)
T 2y7j_A           90 KEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSY  169 (365)
T ss_dssp             HHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred             hhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEE
Confidence            33446688889999999999999996 4799999999865421        1135688999999999 799999999999


Q ss_pred             EeCceeeEEEeccCCCCHHHHHhccCCCCCCchhh
Q 013018          412 LEGEEKILVYEFVPNKSLDYFLYAQSPKNNNNWIG  446 (451)
Q Consensus       412 ~~~~~~~lv~ey~~~GsL~~~L~~~~~~~~l~W~~  446 (451)
                      ......+|||||+++|+|.+++....   .++|..
T Consensus       170 ~~~~~~~lv~e~~~g~~L~~~l~~~~---~l~~~~  201 (365)
T 2y7j_A          170 ESSSFMFLVFDLMRKGELFDYLTEKV---ALSEKE  201 (365)
T ss_dssp             EBSSEEEEEECCCTTCBHHHHHHHHS---SCCHHH
T ss_pred             eeCCEEEEEEEeCCCCcHHHHHHhcC---CCCHHH
Confidence            99999999999999999999998643   255544

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.08  E-value=1.1e-10  Score=112.51  Aligned_cols=98  Identities=26%  Similarity=0.448  Sum_probs=82.7

Q ss_pred             hHHHHHhhccccccceecccCceeEEEEEc-CCCcEEEEEEeccCChhhHHHHHHHHHHHhcC-CCCCcccceeEEEe--
Q 013018          338 FETIEVATNNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKL-QHRNLVRLLGFCLE--  413 (451)
Q Consensus       338 ~~~l~~~~~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~--  413 (451)
                      +.++....++|...+.||+|+||.||++.. .+++.||||.+.... ...+.+.+|+.++.++ +||||+++++++..  
T Consensus        16 ~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~   94 (326)
T 2x7f_A           16 LSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKN   94 (326)
T ss_dssp             CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC
T ss_pred             chhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEeecc
Confidence            334445667889999999999999999994 578999999987543 2346899999999998 79999999999876  


Q ss_pred             ----CceeeEEEeccCCCCHHHHHhcc
Q 013018          414 ----GEEKILVYEFVPNKSLDYFLYAQ  436 (451)
Q Consensus       414 ----~~~~~lv~ey~~~GsL~~~L~~~  436 (451)
                          .+..++|+||+++|+|.+++...
T Consensus        95 ~~~~~~~~~lv~e~~~~~~L~~~l~~~  121 (326)
T 2x7f_A           95 PPGMDDQLWLVMEFCGAGSVTDLIKNT  121 (326)
T ss_dssp             --CCCCEEEEEEECCTTEEHHHHHHHS
T ss_pred             CccccceEEEEEEcCCCCcHHHHHHhc
Confidence                45789999999999999999864

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.07  E-value=1.9e-10  Score=111.23  Aligned_cols=98  Identities=21%  Similarity=0.256  Sum_probs=81.7

Q ss_pred             ccccccceecccCceeEEEEE-cCCCcEEEEEEeccCChhhHHHHHHHHHHHhcC-CCCCcccceeEEEeCceeeEEEec
Q 013018          346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKILVYEF  423 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lv~ey  423 (451)
                      ++|...+.||+|+||.||++. ..+++.||||.+.....  .+.+.+|+.++.++ +||||+++++++...+..++||||
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~   86 (330)
T 2izr_A            9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLEL   86 (330)
T ss_dssp             TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEEC
T ss_pred             CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEe
Confidence            568889999999999999999 56889999999875432  24688999999999 999999999999999999999999


Q ss_pred             cCCCCHHHHHhccCCCCCCchhhhh
Q 013018          424 VPNKSLDYFLYAQSPKNNNNWIGQD  448 (451)
Q Consensus       424 ~~~GsL~~~L~~~~~~~~l~W~~r~  448 (451)
                      + +|+|.+++....  ..++|.+.+
T Consensus        87 ~-~~~L~~~~~~~~--~~~~~~~~~  108 (330)
T 2izr_A           87 L-GPSLEDLFDLCD--RTFSLKTVL  108 (330)
T ss_dssp             C-CCBHHHHHHHTT--TCCCHHHHH
T ss_pred             C-CCCHHHHHHHcC--CCCCHHHHH
Confidence            9 999999998642  246665543

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.07  E-value=9.2e-11  Score=113.95  Aligned_cols=100  Identities=21%  Similarity=0.266  Sum_probs=82.9

Q ss_pred             hccccccceecccCceeEEEEE-cCCCcEEEEEEeccCCh--------hhHHHHHHHHHHHhcCCCCCcccceeEEEeCc
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSG--------QGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGE  415 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~--------~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~  415 (451)
                      .++|...+.||+|+||.||++. ..+++.||||.+.....        ...+.+.+|+.++.+++||||+++++++...+
T Consensus        23 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~  102 (335)
T 3dls_A           23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQG  102 (335)
T ss_dssp             HHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred             ccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCC
Confidence            3568889999999999999998 56789999999975421        12346788999999999999999999999999


Q ss_pred             eeeEEEeccCCC-CHHHHHhccCCCCCCchhhh
Q 013018          416 EKILVYEFVPNK-SLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       416 ~~~lv~ey~~~G-sL~~~L~~~~~~~~l~W~~r  447 (451)
                      ..++|+||+..| +|.+++.....   ++|...
T Consensus       103 ~~~lv~e~~~~g~~l~~~~~~~~~---l~~~~~  132 (335)
T 3dls_A          103 FFQLVMEKHGSGLDLFAFIDRHPR---LDEPLA  132 (335)
T ss_dssp             EEEEEEECCTTSCBHHHHHHTCCC---CCHHHH
T ss_pred             EEEEEEEeCCCCccHHHHHHhcCC---CCHHHH
Confidence            999999999877 99999986543   555443

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.07  E-value=2.2e-10  Score=108.88  Aligned_cols=100  Identities=26%  Similarity=0.432  Sum_probs=78.9

Q ss_pred             ccccccceecccCceeEEEEEcCC----CcEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCcccceeEEEe-CceeeE
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVLPS----GQEIAVKRLSRSS-GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLE-GEEKIL  419 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l~~----g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~~l  419 (451)
                      .+|...++||+|+||.||+|...+    ...+++|.+.... ....+.+.+|+.++++++||||+++++++.. .+..++
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~  104 (298)
T 3f66_A           25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV  104 (298)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred             eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence            356778999999999999998532    2358999987643 3445789999999999999999999999765 457889


Q ss_pred             EEeccCCCCHHHHHhccCCCCCCchhhh
Q 013018          420 VYEFVPNKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       420 v~ey~~~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                      |+||+++|+|.++++...  ..+++.+.
T Consensus       105 v~e~~~~~~L~~~l~~~~--~~~~~~~~  130 (298)
T 3f66_A          105 VLPYMKHGDLRNFIRNET--HNPTVKDL  130 (298)
T ss_dssp             EEECCTTCBHHHHHHCTT--CCCCHHHH
T ss_pred             EEeCCCCCCHHHHHHhcc--cCCCHHHH
Confidence            999999999999998643  23454443

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.07  E-value=2.6e-10  Score=109.25  Aligned_cols=89  Identities=22%  Similarity=0.358  Sum_probs=72.3

Q ss_pred             ccccccceecccCceeEEEEEc-CCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEE------------
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCL------------  412 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~------------  412 (451)
                      ++|...+.||+|+||.||++.. ..++.||||.+........+.+.+|+.++++++||||+++++++.            
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~   90 (320)
T 2i6l_A           11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGS   90 (320)
T ss_dssp             TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----
T ss_pred             CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccccc
Confidence            4678889999999999999995 458999999998776666788999999999999999999998873            


Q ss_pred             --eCceeeEEEeccCCCCHHHHHhc
Q 013018          413 --EGEEKILVYEFVPNKSLDYFLYA  435 (451)
Q Consensus       413 --~~~~~~lv~ey~~~GsL~~~L~~  435 (451)
                        .....++|+||++ |+|.++++.
T Consensus        91 ~~~~~~~~lv~e~~~-~~L~~~~~~  114 (320)
T 2i6l_A           91 LTELNSVYIVQEYME-TDLANVLEQ  114 (320)
T ss_dssp             CCSCSEEEEEEECCS-EEHHHHHTT
T ss_pred             ccccCceeEEeeccC-CCHHHHhhc
Confidence              3457899999997 699999975

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.07  E-value=1.9e-10  Score=110.78  Aligned_cols=92  Identities=18%  Similarity=0.310  Sum_probs=74.6

Q ss_pred             hccccccceecccCceeEEEEE-cCCCcEEEEEEeccCCh--------hhHHHHHHHHHHHhcCCCCCcccceeEEEeCc
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSG--------QGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGE  415 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~--------~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~  415 (451)
                      .++|...+.||+|+||.||++. ..+++.||||.+.....        .....+.+|+.++.+++||||+++++++... 
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-   87 (322)
T 2ycf_A            9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE-   87 (322)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS-
T ss_pred             hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC-
Confidence            3568889999999999999998 45688999999864321        1224588999999999999999999998654 


Q ss_pred             eeeEEEeccCCCCHHHHHhccC
Q 013018          416 EKILVYEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       416 ~~~lv~ey~~~GsL~~~L~~~~  437 (451)
                      ..++|+||+++|+|.+++....
T Consensus        88 ~~~lv~e~~~~~~L~~~~~~~~  109 (322)
T 2ycf_A           88 DYYIVLELMEGGELFDKVVGNK  109 (322)
T ss_dssp             SEEEEEECCTTEETHHHHSTTC
T ss_pred             ceEEEEecCCCCcHHHHHhccC
Confidence            4899999999999999998643

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=99.07  E-value=4.1e-10  Score=106.99  Aligned_cols=91  Identities=31%  Similarity=0.511  Sum_probs=76.4

Q ss_pred             ccccccceecccCceeEEEEEc-CCCcEEEEEEeccCCh--hhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEe
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSG--QGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  422 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  422 (451)
                      ++|+..+.||+|+||.||++.. .+++.||||.+.....  ...+.+.+|+.++.+++||||+++++++...+..++|+|
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (299)
T 2r3i_A            3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE   82 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence            5678889999999999999994 4789999999865432  223678999999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhccC
Q 013018          423 FVPNKSLDYFLYAQS  437 (451)
Q Consensus       423 y~~~GsL~~~L~~~~  437 (451)
                      |++ |+|.+++....
T Consensus        83 ~~~-~~L~~~~~~~~   96 (299)
T 2r3i_A           83 FLH-QDLKKFMDASA   96 (299)
T ss_dssp             CCS-EEHHHHHHHTT
T ss_pred             ccc-CCHHHHHHhhh
Confidence            997 69999998654

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.07  E-value=1.6e-10  Score=112.69  Aligned_cols=89  Identities=20%  Similarity=0.336  Sum_probs=76.3

Q ss_pred             hccccccceecccCceeEEEEEc-CCCcEEEEEEeccCChhhHHHHHHHHHHHhcC-CCCCcccceeEEEeCceeeEEEe
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKILVYE  422 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e  422 (451)
                      .++|...+.||+|+||.||++.. .+++.+|||.+.....    ...+|++++.++ +||||+++++++...+..++|||
T Consensus        21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E   96 (342)
T 2qr7_A           21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTE   96 (342)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEEC
T ss_pred             cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEe
Confidence            45688889999999999999994 5689999999975432    345688888887 79999999999999999999999


Q ss_pred             ccCCCCHHHHHhccC
Q 013018          423 FVPNKSLDYFLYAQS  437 (451)
Q Consensus       423 y~~~GsL~~~L~~~~  437 (451)
                      |+++|+|.+++....
T Consensus        97 ~~~gg~L~~~i~~~~  111 (342)
T 2qr7_A           97 LMKGGELLDKILRQK  111 (342)
T ss_dssp             CCCSCBHHHHHHTCT
T ss_pred             CCCCCcHHHHHHHcC
Confidence            999999999998643

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.06  E-value=3.2e-10  Score=110.35  Aligned_cols=99  Identities=21%  Similarity=0.322  Sum_probs=83.1

Q ss_pred             hccccccceecccCceeEEEEEcCCCcEEEEEEeccC--ChhhHHHHHHHHHHHhcCCC--CCcccceeEEEeCceeeEE
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRS--SGQGGQEFKNEVVLVAKLQH--RNLVRLLGFCLEGEEKILV  420 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h--~niv~l~g~~~~~~~~~lv  420 (451)
                      .+.|...+.||+|+||.||++...+++.||||++...  ..+..+.+.+|+.++.+++|  +||+++++++......+||
T Consensus         8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv   87 (343)
T 3dbq_A            8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV   87 (343)
T ss_dssp             SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence            4568889999999999999999888999999998754  33445789999999999976  9999999999999999999


Q ss_pred             EeccCCCCHHHHHhccCCCCCCchhhh
Q 013018          421 YEFVPNKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       421 ~ey~~~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                      || +.+|+|.+++.....   ++|.++
T Consensus        88 ~e-~~~~~L~~~l~~~~~---~~~~~~  110 (343)
T 3dbq_A           88 ME-CGNIDLNSWLKKKKS---IDPWER  110 (343)
T ss_dssp             EC-CCSEEHHHHHHHSCC---CCHHHH
T ss_pred             Ee-CCCCCHHHHHHhcCC---CCHHHH
Confidence            99 568899999987543   555443

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.06  E-value=3e-10  Score=108.79  Aligned_cols=90  Identities=26%  Similarity=0.444  Sum_probs=74.5

Q ss_pred             hhccccccceecccCceeEEEEEc-CCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEe
Q 013018          344 ATNNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  422 (451)
Q Consensus       344 ~~~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  422 (451)
                      ..++|...+.||+|+||.||++.. .+|+.||||.+....  ..+++.+|+.++.+++||||+++++++...+..++|+|
T Consensus        27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  104 (314)
T 3com_A           27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVME  104 (314)
T ss_dssp             ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEee
Confidence            456788899999999999999995 468999999997543  34679999999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhc
Q 013018          423 FVPNKSLDYFLYA  435 (451)
Q Consensus       423 y~~~GsL~~~L~~  435 (451)
                      |+++|+|.+++..
T Consensus       105 ~~~~~~L~~~~~~  117 (314)
T 3com_A          105 YCGAGSVSDIIRL  117 (314)
T ss_dssp             CCTTEEHHHHHHH
T ss_pred             cCCCCCHHHHHHh
Confidence            9999999999974

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.06  E-value=8e-10  Score=107.11  Aligned_cols=98  Identities=23%  Similarity=0.372  Sum_probs=81.6

Q ss_pred             HHhhccccccceecccCceeEEEEEcCCCcEEEEEEeccCChhhHHHHHHHHHHHhc--CCCCCcccceeEEEeCc----
Q 013018          342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAK--LQHRNLVRLLGFCLEGE----  415 (451)
Q Consensus       342 ~~~~~~~~~~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~g~~~~~~----  415 (451)
                      ....++|...+.||+|+||.||++.. +++.||||.+...   ....+.+|.+++..  ++||||+++++++....    
T Consensus        38 ~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~  113 (342)
T 1b6c_B           38 RTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWT  113 (342)
T ss_dssp             HHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCC
T ss_pred             ccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccc
Confidence            34456789999999999999999998 6899999998643   34678888888877  78999999999998765    


Q ss_pred             eeeEEEeccCCCCHHHHHhccCCCCCCchhhh
Q 013018          416 EKILVYEFVPNKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       416 ~~~lv~ey~~~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                      ..++|+||+++|+|.++++..    .++|.++
T Consensus       114 ~~~lv~e~~~~g~L~~~l~~~----~~~~~~~  141 (342)
T 1b6c_B          114 QLWLVSDYHEHGSLFDYLNRY----TVTVEGM  141 (342)
T ss_dssp             CEEEEECCCTTCBHHHHHHHC----CBCHHHH
T ss_pred             eeEEEEeecCCCcHHHHHhcc----CccHHHH
Confidence            789999999999999999863    2566544

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.05  E-value=1.9e-10  Score=113.43  Aligned_cols=92  Identities=21%  Similarity=0.279  Sum_probs=70.3

Q ss_pred             ccccccceecccCceeEEEEEc-CCCcEEEEEEeccCC---hhhHHHHHHHHHH-HhcCCCCCcccceeEEEeCceeeEE
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSS---GQGGQEFKNEVVL-VAKLQHRNLVRLLGFCLEGEEKILV  420 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~---~~~~~~~~~E~~~-l~~l~h~niv~l~g~~~~~~~~~lv  420 (451)
                      ++|...+.||+|+||.||++.. .+++.+|||++....   ......+.+|..+ ++.++||||+++++.+...+..+||
T Consensus        38 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv  117 (373)
T 2r5t_A           38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFV  117 (373)
T ss_dssp             GGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEE
Confidence            4678889999999999999994 468899999997542   2233567777776 5678999999999999999999999


Q ss_pred             EeccCCCCHHHHHhccC
Q 013018          421 YEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       421 ~ey~~~GsL~~~L~~~~  437 (451)
                      |||+++|+|.++|+..+
T Consensus       118 ~E~~~gg~L~~~l~~~~  134 (373)
T 2r5t_A          118 LDYINGGELFYHLQRER  134 (373)
T ss_dssp             EECCCSCBHHHHHHHHS
T ss_pred             EeCCCCCcHHHHHHhcC
Confidence            99999999999998643

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.05  E-value=2.4e-10  Score=107.52  Aligned_cols=90  Identities=30%  Similarity=0.507  Sum_probs=76.8

Q ss_pred             hhccccccceecccCceeEEEEEcCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeC-ceeeEEEe
Q 013018          344 ATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEG-EEKILVYE  422 (451)
Q Consensus       344 ~~~~~~~~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-~~~~lv~e  422 (451)
                      ..++|+..+.||+|+||.||++.. .|+.||||.+....  ..+.+.+|+.++.+++||||+++++++... +..++|+|
T Consensus        19 ~~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e   95 (278)
T 1byg_A           19 NMKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE   95 (278)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEEC
T ss_pred             ChhhceEEeEEecCCCceEEEEEE-cCCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEe
Confidence            346788899999999999999987 58899999997543  456899999999999999999999997654 47899999


Q ss_pred             ccCCCCHHHHHhcc
Q 013018          423 FVPNKSLDYFLYAQ  436 (451)
Q Consensus       423 y~~~GsL~~~L~~~  436 (451)
                      |+++|+|.+++...
T Consensus        96 ~~~~~~L~~~l~~~  109 (278)
T 1byg_A           96 YMAKGSLVDYLRSR  109 (278)
T ss_dssp             CCTTEEHHHHHHHH
T ss_pred             cCCCCCHHHHHHhc
Confidence            99999999999864

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.05  E-value=1.8e-10  Score=109.25  Aligned_cols=101  Identities=29%  Similarity=0.455  Sum_probs=80.2

Q ss_pred             HHhhccccccceecccCceeEEEEEcCCCcEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeE
Q 013018          342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRS--SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKIL  419 (451)
Q Consensus       342 ~~~~~~~~~~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l  419 (451)
                      ++..++|...+.||+|+||.||++....  .+|||.+...  .....+.|.+|+.++++++||||++++++. ..+..++
T Consensus        20 ei~~~~y~~~~~lG~G~~g~Vy~~~~~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~l   96 (289)
T 3og7_A           20 EIPDGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAI   96 (289)
T ss_dssp             BCCTTSCEEEEEEEECSSEEEEEEESSS--EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEE
T ss_pred             ccCccceeeeeEecCCCCeEEEEEEEcC--ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEE
Confidence            3445678889999999999999998643  5999999754  334457899999999999999999999965 4567899


Q ss_pred             EEeccCCCCHHHHHhccCCCCCCchhhh
Q 013018          420 VYEFVPNKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       420 v~ey~~~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                      |+||+++|+|.++++...  ..++|.+.
T Consensus        97 v~e~~~~~~L~~~l~~~~--~~~~~~~~  122 (289)
T 3og7_A           97 VTQWCEGSSLYHHLHASE--TKFEMKKL  122 (289)
T ss_dssp             EEECCCEEEHHHHHTTC-----CCHHHH
T ss_pred             EEEecCCCcHHHHHhhcc--CCCCHHHH
Confidence            999999999999997543  33555544

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.04  E-value=6.4e-10  Score=107.49  Aligned_cols=96  Identities=20%  Similarity=0.372  Sum_probs=77.4

Q ss_pred             hhccccccceecccCceeEEEEEcCCCcEEEEEEeccCChhhHHHHHHHHHHHhcC--CCCCcccceeEEEeC----cee
Q 013018          344 ATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKL--QHRNLVRLLGFCLEG----EEK  417 (451)
Q Consensus       344 ~~~~~~~~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l--~h~niv~l~g~~~~~----~~~  417 (451)
                      ..++|...+.||+|+||.||++.. .++.||||++...   ....+.+|.+++..+  +||||+++++++...    ...
T Consensus        35 ~~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~  110 (337)
T 3mdy_A           35 IAKQIQMVKQIGKGRYGEVWMGKW-RGEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQL  110 (337)
T ss_dssp             HHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEE
T ss_pred             cccceEEEeEeecCCCeEEEEEEE-CCceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCce
Confidence            446789999999999999999998 4899999998643   234555666666554  899999999999876    678


Q ss_pred             eEEEeccCCCCHHHHHhccCCCCCCchhhh
Q 013018          418 ILVYEFVPNKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       418 ~lv~ey~~~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                      ++||||+++|+|.++|+..    .++|.+.
T Consensus       111 ~lv~e~~~~g~L~~~l~~~----~~~~~~~  136 (337)
T 3mdy_A          111 YLITDYHENGSLYDYLKST----TLDAKSM  136 (337)
T ss_dssp             EEEECCCTTCBHHHHHHHC----CBCHHHH
T ss_pred             EEEEeccCCCcHHHHhhcc----CCCHHHH
Confidence            9999999999999999764    2555543

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.04  E-value=5.3e-10  Score=106.53  Aligned_cols=100  Identities=21%  Similarity=0.330  Sum_probs=78.9

Q ss_pred             ccccccceecccCceeEEEEEc-CCCcEEEEEEeccCC----hhhHHHHHHHHHHHhcCCCCCcccceeEEEe--Cceee
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSS----GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLE--GEEKI  418 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~--~~~~~  418 (451)
                      ++|...+.||+|+||.||++.. .+++.+|+|.+....    ....+.+.+|+.++.+++||||+++++++..  ....+
T Consensus         5 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~   84 (305)
T 2wtk_C            5 GKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMY   84 (305)
T ss_dssp             CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEE
T ss_pred             cceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEE
Confidence            5688899999999999999994 578899999996532    2345789999999999999999999999853  45789


Q ss_pred             EEEeccCCCCHHHHHhccCCCCCCchhhh
Q 013018          419 LVYEFVPNKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       419 lv~ey~~~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                      +|+||+++| |.+++..... ..++|...
T Consensus        85 lv~e~~~~~-l~~~~~~~~~-~~~~~~~~  111 (305)
T 2wtk_C           85 MVMEYCVCG-MQEMLDSVPE-KRFPVCQA  111 (305)
T ss_dssp             EEEECCSEE-HHHHHHHSTT-CSCCHHHH
T ss_pred             EEehhccCC-HHHHHHhCcc-cccCHHHH
Confidence            999999876 8888776432 33555443

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.04  E-value=2.5e-10  Score=107.90  Aligned_cols=103  Identities=21%  Similarity=0.227  Sum_probs=78.7

Q ss_pred             hhccccccceecccCceeEEEEE-cCCCcEEEEEEeccCC-hhhH-HHHHHHHHHHhcCCCCCcccceeEEEeCceeeEE
Q 013018          344 ATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSS-GQGG-QEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILV  420 (451)
Q Consensus       344 ~~~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~-~~~~-~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv  420 (451)
                      ..++|...+.||+|+||.||++. ..+++.||||++.... .... +.+.++...++.++||||+++++++...+..++|
T Consensus         5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv   84 (290)
T 3fme_A            5 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC   84 (290)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEE
T ss_pred             cHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEE
Confidence            45678889999999999999999 4678999999997542 2222 3455555668888999999999999999999999


Q ss_pred             EeccCCCCHHHHHhccC-CCCCCchhhh
Q 013018          421 YEFVPNKSLDYFLYAQS-PKNNNNWIGQ  447 (451)
Q Consensus       421 ~ey~~~GsL~~~L~~~~-~~~~l~W~~r  447 (451)
                      +||++ |+|.++++... .+..++|...
T Consensus        85 ~e~~~-~~l~~~l~~~~~~~~~~~~~~~  111 (290)
T 3fme_A           85 MELMD-TSLDKFYKQVIDKGQTIPEDIL  111 (290)
T ss_dssp             EECCS-EEHHHHHHHHHHTTCCCCHHHH
T ss_pred             Eehhc-cchHHHHHHHHhcCCCCCHHHH
Confidence            99997 59988887522 2334666544

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.03  E-value=4.9e-10  Score=111.18  Aligned_cols=97  Identities=22%  Similarity=0.324  Sum_probs=81.9

Q ss_pred             ccccccceecccCceeEEEEEcCCCcEEEEEEeccC--ChhhHHHHHHHHHHHhcCC--CCCcccceeEEEeCceeeEEE
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRS--SGQGGQEFKNEVVLVAKLQ--HRNLVRLLGFCLEGEEKILVY  421 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~--h~niv~l~g~~~~~~~~~lv~  421 (451)
                      +.|...+.||+|+||.||++....++.||||.+...  ..+..+.+.+|+.+|.+++  ||||+++++++...+..+|||
T Consensus        56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~  135 (390)
T 2zmd_A           56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM  135 (390)
T ss_dssp             EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred             CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence            458889999999999999999777999999998654  3344578999999999996  599999999999999999999


Q ss_pred             eccCCCCHHHHHhccCCCCCCchhh
Q 013018          422 EFVPNKSLDYFLYAQSPKNNNNWIG  446 (451)
Q Consensus       422 ey~~~GsL~~~L~~~~~~~~l~W~~  446 (451)
                      | +.+|+|.++|....   .++|.+
T Consensus       136 E-~~~~~L~~~l~~~~---~~~~~~  156 (390)
T 2zmd_A          136 E-CGNIDLNSWLKKKK---SIDPWE  156 (390)
T ss_dssp             E-CCSEEHHHHHHHCS---SCCHHH
T ss_pred             e-cCCCCHHHHHHhcC---CCCHHH
Confidence            9 57889999998754   345543

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.03  E-value=3.3e-10  Score=106.76  Aligned_cols=100  Identities=28%  Similarity=0.474  Sum_probs=80.3

Q ss_pred             hhccccccceecccCceeEEEEEcCC----CcEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceee
Q 013018          344 ATNNFSTDNKLGEGGFGEVYKGVLPS----GQEIAVKRLSRS-SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKI  418 (451)
Q Consensus       344 ~~~~~~~~~~lG~G~fg~V~~~~l~~----g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~  418 (451)
                      ..++|...+.||+|+||.||++....    +..||||.+... .....+.+.+|+.++.+++||||+++++++. .+..+
T Consensus        10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~   88 (281)
T 3cc6_A           10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIE-EEPTW   88 (281)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEEC-SSSCE
T ss_pred             cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCCE
Confidence            45678889999999999999998532    346999999765 3344578999999999999999999999875 45678


Q ss_pred             EEEeccCCCCHHHHHhccCCCCCCchhh
Q 013018          419 LVYEFVPNKSLDYFLYAQSPKNNNNWIG  446 (451)
Q Consensus       419 lv~ey~~~GsL~~~L~~~~~~~~l~W~~  446 (451)
                      +|+||+++|+|.++++....  .++|..
T Consensus        89 ~v~e~~~~~~L~~~l~~~~~--~~~~~~  114 (281)
T 3cc6_A           89 IIMELYPYGELGHYLERNKN--SLKVLT  114 (281)
T ss_dssp             EEEECCTTCBHHHHHHHHTT--TCCHHH
T ss_pred             EEEecCCCCCHHHHHHhccc--cCCHHH
Confidence            99999999999999986432  244443

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.03  E-value=4.9e-10  Score=112.70  Aligned_cols=92  Identities=18%  Similarity=0.397  Sum_probs=78.1

Q ss_pred             hccccccceecccCceeEEEEE-cCCCcEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeC-----ce
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRS--SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEG-----EE  416 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-----~~  416 (451)
                      .++|...+.||+|+||.||++. ..+++.||||++...  .....+.+.+|+.+|.+++||||+++++++...     ..
T Consensus        25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~  104 (432)
T 3n9x_A           25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE  104 (432)
T ss_dssp             CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred             cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence            3568889999999999999999 456889999999753  333457899999999999999999999998765     56


Q ss_pred             eeEEEeccCCCCHHHHHhccC
Q 013018          417 KILVYEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       417 ~~lv~ey~~~GsL~~~L~~~~  437 (451)
                      .+||+||++ |+|.++++...
T Consensus       105 ~~lv~e~~~-~~L~~~~~~~~  124 (432)
T 3n9x_A          105 LYIVLEIAD-SDLKKLFKTPI  124 (432)
T ss_dssp             EEEEEECCS-EEHHHHHHSSC
T ss_pred             EEEEEecCC-cCHHHHHhccC
Confidence            899999986 69999998643

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.03  E-value=2.3e-10  Score=121.93  Aligned_cols=98  Identities=18%  Similarity=0.287  Sum_probs=78.8

Q ss_pred             ccccccceecccCceeEEEEEcC--CCcEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCce-----e
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVLP--SGQEIAVKRLSRS-SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEE-----K  417 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l~--~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~-----~  417 (451)
                      ++|...+.||+|+||.||++...  +++.||||.+... .....+.+.+|+.++.+++||||+++++++...+.     .
T Consensus        80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~  159 (681)
T 2pzi_A           80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG  159 (681)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred             CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence            57888999999999999999953  6899999998654 33445679999999999999999999999987554     6


Q ss_pred             eEEEeccCCCCHHHHHhccCCCCCCchhhhh
Q 013018          418 ILVYEFVPNKSLDYFLYAQSPKNNNNWIGQD  448 (451)
Q Consensus       418 ~lv~ey~~~GsL~~~L~~~~~~~~l~W~~r~  448 (451)
                      +|||||+++++|.+++..     .++|.+++
T Consensus       160 ~lv~E~~~g~~L~~~~~~-----~l~~~~~~  185 (681)
T 2pzi_A          160 YIVMEYVGGQSLKRSKGQ-----KLPVAEAI  185 (681)
T ss_dssp             EEEEECCCCEECC----C-----CCCHHHHH
T ss_pred             EEEEEeCCCCcHHHHHhC-----CCCHHHHH
Confidence            999999999999988764     36676554

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.03  E-value=1.5e-10  Score=113.36  Aligned_cols=93  Identities=20%  Similarity=0.279  Sum_probs=79.4

Q ss_pred             hccccccceecccCceeEEEEEc----CCCcEEEEEEeccCC----hhhHHHHHHHHHHHhcC-CCCCcccceeEEEeCc
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGVL----PSGQEIAVKRLSRSS----GQGGQEFKNEVVLVAKL-QHRNLVRLLGFCLEGE  415 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~l----~~g~~vavK~l~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~  415 (451)
                      .++|...+.||+|+||.||++..    .+++.||||++....    ....+.+.+|+.++.++ +||||+++++++...+
T Consensus        53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~  132 (355)
T 1vzo_A           53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET  132 (355)
T ss_dssp             GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred             ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence            35688899999999999999985    468999999986432    12335678899999999 6999999999999999


Q ss_pred             eeeEEEeccCCCCHHHHHhccC
Q 013018          416 EKILVYEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       416 ~~~lv~ey~~~GsL~~~L~~~~  437 (451)
                      ..+|||||+++|+|.++|....
T Consensus       133 ~~~lv~e~~~~~~L~~~l~~~~  154 (355)
T 1vzo_A          133 KLHLILDYINGGELFTHLSQRE  154 (355)
T ss_dssp             EEEEEECCCCSCBHHHHHHHHS
T ss_pred             eEEEEeecCCCCCHHHHHHHcC
Confidence            9999999999999999998654

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.01  E-value=1e-10  Score=122.80  Aligned_cols=102  Identities=21%  Similarity=0.298  Sum_probs=83.0

Q ss_pred             ccccccceecccCceeEEEEEc-CCCcEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCcccceeEEEe------Ccee
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRS-SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLE------GEEK  417 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~------~~~~  417 (451)
                      ++|...+.||+|+||.||++.. .+|+.||||.+... .....+.+.+|+.++.+++||||+++++++..      .+..
T Consensus        14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~   93 (676)
T 3qa8_A           14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLP   93 (676)
T ss_dssp             ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSC
T ss_pred             CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeE
Confidence            5688899999999999999984 56899999998754 34445789999999999999999999998754      5678


Q ss_pred             eEEEeccCCCCHHHHHhccCCCCCCchhhh
Q 013018          418 ILVYEFVPNKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       418 ~lv~ey~~~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                      ++|+||+++|+|.++++.......++|...
T Consensus        94 ~LVmEy~~ggsL~~~L~~~~~~~~lse~~i  123 (676)
T 3qa8_A           94 LLAMEYCEGGDLRKYLNQFENCCGLKEGPI  123 (676)
T ss_dssp             CCEEECCSSCBHHHHHHSSSCTTCCCSSHH
T ss_pred             EEEEEeCCCCCHHHHHHhcccCCCCCHHHH
Confidence            999999999999999998655445655443

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.01  E-value=1.3e-10  Score=112.24  Aligned_cols=91  Identities=29%  Similarity=0.440  Sum_probs=75.4

Q ss_pred             ccccccceecccCceeEEEEEc-CCCcEEEEEEeccCChhh-HHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEec
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSGQG-GQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  423 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey  423 (451)
                      ++|...+.||+|+||.||++.. .+++.||||.+....... ...+.+|+.++.+++||||+++++++...+..+|||||
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY   81 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence            4678889999999999999994 478999999996543222 13466899999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhccC
Q 013018          424 VPNKSLDYFLYAQS  437 (451)
Q Consensus       424 ~~~GsL~~~L~~~~  437 (451)
                      ++ |+|.+++....
T Consensus        82 ~~-~~l~~~~~~~~   94 (324)
T 3mtl_A           82 LD-KDLKQYLDDCG   94 (324)
T ss_dssp             CS-EEHHHHHHHTT
T ss_pred             cc-cCHHHHHHhcC
Confidence            97 69999998653

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.01  E-value=3.4e-10  Score=119.82  Aligned_cols=106  Identities=20%  Similarity=0.345  Sum_probs=84.7

Q ss_pred             HHHHhhccccccceecccCceeEEEEEcC----CCcEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeC
Q 013018          340 TIEVATNNFSTDNKLGEGGFGEVYKGVLP----SGQEIAVKRLSRS-SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEG  414 (451)
Q Consensus       340 ~l~~~~~~~~~~~~lG~G~fg~V~~~~l~----~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~  414 (451)
                      +.+...++|...+.||+|+||.||+|...    .+..||||.+... .....+.|.+|+.++.+++||||++++|++. .
T Consensus       384 ~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~  462 (656)
T 2j0j_A          384 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-E  462 (656)
T ss_dssp             GTBCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-S
T ss_pred             ccccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-c
Confidence            44455667888999999999999999853    2457999998754 3334578999999999999999999999984 5


Q ss_pred             ceeeEEEeccCCCCHHHHHhccCCCCCCchhhhh
Q 013018          415 EEKILVYEFVPNKSLDYFLYAQSPKNNNNWIGQD  448 (451)
Q Consensus       415 ~~~~lv~ey~~~GsL~~~L~~~~~~~~l~W~~r~  448 (451)
                      +..++||||+++|+|.++|+.+.  ..++|..++
T Consensus       463 ~~~~lv~E~~~~g~L~~~l~~~~--~~l~~~~~~  494 (656)
T 2j0j_A          463 NPVWIIMELCTLGELRSFLQVRK--FSLDLASLI  494 (656)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHTT--TTCCHHHHH
T ss_pred             CceEEEEEcCCCCcHHHHHHhcc--CCCCHHHHH
Confidence            67899999999999999998643  236665543

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.01  E-value=5.3e-10  Score=108.03  Aligned_cols=105  Identities=19%  Similarity=0.219  Sum_probs=83.2

Q ss_pred             HHhhcccccc-ceecccCceeEEEEE-cCCCcEEEEEEeccC--ChhhHHHHHHHHHHHhcC-CCCCcccceeEEEeCce
Q 013018          342 EVATNNFSTD-NKLGEGGFGEVYKGV-LPSGQEIAVKRLSRS--SGQGGQEFKNEVVLVAKL-QHRNLVRLLGFCLEGEE  416 (451)
Q Consensus       342 ~~~~~~~~~~-~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~  416 (451)
                      +.-.+.|... +.||+|+||.||++. ..+++.||||.+...  ......++.+|+.++.++ +||||+++++++...+.
T Consensus        24 ~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~  103 (327)
T 3lm5_A           24 ENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSE  103 (327)
T ss_dssp             HHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE
T ss_pred             HhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCe
Confidence            3334445555 889999999999998 456899999999754  233457899999999999 57999999999999999


Q ss_pred             eeEEEeccCCCCHHHHHhccCCCCCCchhhh
Q 013018          417 KILVYEFVPNKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       417 ~~lv~ey~~~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                      .++|+||+++|+|.+++..... ..++|.+.
T Consensus       104 ~~lv~e~~~~~~L~~~~~~~~~-~~~~~~~~  133 (327)
T 3lm5_A          104 IILILEYAAGGEIFSLCLPELA-EMVSENDV  133 (327)
T ss_dssp             EEEEEECCTTEEGGGGGSSCC--CCCCHHHH
T ss_pred             EEEEEEecCCCcHHHHHHHhcc-cCCCHHHH
Confidence            9999999999999999875322 33555443

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.00  E-value=4.6e-10  Score=109.38  Aligned_cols=93  Identities=25%  Similarity=0.399  Sum_probs=73.1

Q ss_pred             hhccccccceecccCceeEEEEEc-CCCcEEEEEEeccCChhh-----HHHHHHHHHHHhcCCCCCcccceeEEEeCcee
Q 013018          344 ATNNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSGQG-----GQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEK  417 (451)
Q Consensus       344 ~~~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~~~~-----~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~  417 (451)
                      ..++|...+.||+|+||.||++.. .+|+.||||.+.......     .+.+.+|+.++.+++||||+++++++...+..
T Consensus         8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   87 (346)
T 1ua2_A            8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNI   87 (346)
T ss_dssp             -----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCC
T ss_pred             HhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCce
Confidence            345688899999999999999995 468999999997532211     24688999999999999999999999988999


Q ss_pred             eEEEeccCCCCHHHHHhccC
Q 013018          418 ILVYEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       418 ~lv~ey~~~GsL~~~L~~~~  437 (451)
                      ++|+||+++ +|.+++....
T Consensus        88 ~lv~e~~~~-~l~~~~~~~~  106 (346)
T 1ua2_A           88 SLVFDFMET-DLEVIIKDNS  106 (346)
T ss_dssp             EEEEECCSE-EHHHHHTTCC
T ss_pred             EEEEEcCCC-CHHHHHHhcC
Confidence            999999985 8999988643

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.00  E-value=1.7e-10  Score=111.32  Aligned_cols=99  Identities=29%  Similarity=0.439  Sum_probs=77.6

Q ss_pred             ccccccceecccCceeEEEEEc-CCCc----EEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeE
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVL-PSGQ----EIAVKRLSRSS-GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKIL  419 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l-~~g~----~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l  419 (451)
                      ++|...+.||+|+||.||++.. .+++    .|++|.+.... .+....+.+|+.++.+++||||+++++++. .+..++
T Consensus        13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~   91 (325)
T 3kex_A           13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQL   91 (325)
T ss_dssp             TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEE
T ss_pred             hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEE
Confidence            4577889999999999999994 4444    38888875442 233356889999999999999999999885 567889


Q ss_pred             EEeccCCCCHHHHHhccCCCCCCchhhh
Q 013018          420 VYEFVPNKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       420 v~ey~~~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                      |+||+++|+|.++++..+  ..++|...
T Consensus        92 v~e~~~~~~L~~~l~~~~--~~~~~~~~  117 (325)
T 3kex_A           92 VTQYLPLGSLLDHVRQHR--GALGPQLL  117 (325)
T ss_dssp             EEECCTTCBSHHHHHSSG--GGSCTTHH
T ss_pred             EEEeCCCCCHHHHHHHcc--ccCCHHHH
Confidence            999999999999998643  23555443

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.00  E-value=1.2e-09  Score=103.93  Aligned_cols=95  Identities=18%  Similarity=0.167  Sum_probs=75.9

Q ss_pred             ccccc-ceecccCceeEEEEE-cCCCcEEEEEEeccCChhhHHHHHHHHHHH-hcCCCCCcccceeEEEe----CceeeE
Q 013018          347 NFSTD-NKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLV-AKLQHRNLVRLLGFCLE----GEEKIL  419 (451)
Q Consensus       347 ~~~~~-~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~~~~~~~~~E~~~l-~~l~h~niv~l~g~~~~----~~~~~l  419 (451)
                      +|... +.||+|+||.||++. ..+++.||+|.+...     ..+.+|+.++ ..++||||+++++++..    ....+|
T Consensus        18 ~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~l   92 (299)
T 3m2w_A           18 DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLI   92 (299)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEE
T ss_pred             chhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc-----HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEE
Confidence            45554 779999999999998 467899999999643     4677888887 55699999999999876    567899


Q ss_pred             EEeccCCCCHHHHHhccCCCCCCchhhh
Q 013018          420 VYEFVPNKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       420 v~ey~~~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                      ||||+++|+|.+++..... ..+++.+.
T Consensus        93 v~e~~~~~~L~~~l~~~~~-~~~~~~~~  119 (299)
T 3m2w_A           93 VMECLDGGELFSRIQDRGD-QAFTEREA  119 (299)
T ss_dssp             EECCCCSCBHHHHHHHCTT-CCCBHHHH
T ss_pred             EEeecCCCcHHHHHHhccC-CCCCHHHH
Confidence            9999999999999997542 23555443

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=98.99  E-value=9.3e-10  Score=109.53  Aligned_cols=95  Identities=18%  Similarity=0.172  Sum_probs=73.7

Q ss_pred             ccccc-ceecccCceeEEEEE-cCCCcEEEEEEeccCChhhHHHHHHHHHHHhc-CCCCCcccceeEEEe----CceeeE
Q 013018          347 NFSTD-NKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAK-LQHRNLVRLLGFCLE----GEEKIL  419 (451)
Q Consensus       347 ~~~~~-~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~-l~h~niv~l~g~~~~----~~~~~l  419 (451)
                      +|... ++||+|+||.||++. ..+++.||||++...     ..+.+|+.++.+ .+||||+++++++..    ....+|
T Consensus        62 ~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~l  136 (400)
T 1nxk_A           62 DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLI  136 (400)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEE
T ss_pred             cceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEE
Confidence            34444 689999999999998 457899999999643     456788888754 589999999998865    557899


Q ss_pred             EEeccCCCCHHHHHhccCCCCCCchhhh
Q 013018          420 VYEFVPNKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       420 v~ey~~~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                      ||||+++|+|.++|+... ...++|.+.
T Consensus       137 v~E~~~gg~L~~~l~~~~-~~~l~~~~~  163 (400)
T 1nxk_A          137 VMECLDGGELFSRIQDRG-DQAFTEREA  163 (400)
T ss_dssp             EEECCCSEEHHHHHHCC----CCBHHHH
T ss_pred             EEEeCCCCcHHHHHHHhC-CCCCCHHHH
Confidence            999999999999998743 234666543

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=98.99  E-value=5.7e-10  Score=113.04  Aligned_cols=91  Identities=16%  Similarity=0.383  Sum_probs=68.0

Q ss_pred             ccccccceecccCceeEEEEE-cCCCcEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeC-----cee
Q 013018          346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRS--SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEG-----EEK  417 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-----~~~  417 (451)
                      ++|...++||+|+||.||++. ..+++.||||++...  .....+.+.+|+.+|.+++||||+++++++...     ...
T Consensus        53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~  132 (458)
T 3rp9_A           53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDEL  132 (458)
T ss_dssp             TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred             CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceE
Confidence            568889999999999999998 457899999999653  333457899999999999999999999998543     468


Q ss_pred             eEEEeccCCCCHHHHHhccC
Q 013018          418 ILVYEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       418 ~lv~ey~~~GsL~~~L~~~~  437 (451)
                      +||+||+ +|+|.++++...
T Consensus       133 ~lv~e~~-~~~L~~~~~~~~  151 (458)
T 3rp9_A          133 YVVLEIA-DSDFKKLFRTPV  151 (458)
T ss_dssp             EEEECCC-SEEHHHHHHSSC
T ss_pred             EEEEecc-ccchhhhcccCC
Confidence            9999998 579999998643

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=98.99  E-value=1e-09  Score=105.89  Aligned_cols=87  Identities=22%  Similarity=0.465  Sum_probs=76.5

Q ss_pred             ccccccceecccCceeEEEEE-cCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCC-CCCcccceeEEEe--CceeeEEE
Q 013018          346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQ-HRNLVRLLGFCLE--GEEKILVY  421 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~--~~~~~lv~  421 (451)
                      ++|+..+.||+|+||.||++. ..+++.||||.+...   ..+.+.+|+.++.+++ ||||+++++++..  ....++|+
T Consensus        36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~  112 (330)
T 3nsz_A           36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF  112 (330)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEE
T ss_pred             CceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEE
Confidence            567888999999999999998 567899999999744   3467899999999997 9999999999987  55789999


Q ss_pred             eccCCCCHHHHHhc
Q 013018          422 EFVPNKSLDYFLYA  435 (451)
Q Consensus       422 ey~~~GsL~~~L~~  435 (451)
                      ||+++++|.++++.
T Consensus       113 e~~~~~~l~~~~~~  126 (330)
T 3nsz_A          113 EHVNNTDFKQLYQT  126 (330)
T ss_dssp             ECCCCCCHHHHGGG
T ss_pred             eccCchhHHHHHHh
Confidence            99999999999864

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=98.98  E-value=6.5e-10  Score=107.50  Aligned_cols=99  Identities=29%  Similarity=0.525  Sum_probs=79.1

Q ss_pred             hccccccceecccCceeEEEEEc-CCCc----EEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceee
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGVL-PSGQ----EIAVKRLSRS-SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKI  418 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~l-~~g~----~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~  418 (451)
                      .++|...++||+|+||.||++.. .+++    .|++|.+... .....+.+.+|+.++.+++||||+++++++... ..+
T Consensus        14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-~~~   92 (327)
T 3lzb_A           14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQ   92 (327)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESS-SEE
T ss_pred             HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecC-Cce
Confidence            35688899999999999999994 4444    4688887543 334567899999999999999999999999765 478


Q ss_pred             EEEeccCCCCHHHHHhccCCCCCCchhh
Q 013018          419 LVYEFVPNKSLDYFLYAQSPKNNNNWIG  446 (451)
Q Consensus       419 lv~ey~~~GsL~~~L~~~~~~~~l~W~~  446 (451)
                      +++||+++|+|.++++....  .+++..
T Consensus        93 ~v~~~~~~g~L~~~l~~~~~--~~~~~~  118 (327)
T 3lzb_A           93 LITQLMPFGCLLDYVREHKD--NIGSQY  118 (327)
T ss_dssp             EEECCCSSCBHHHHHHHTTT--CCCHHH
T ss_pred             EEEEecCCCcHHHHHHhcCC--CCCHHH
Confidence            99999999999999987543  244443

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=98.97  E-value=3.6e-10  Score=106.92  Aligned_cols=91  Identities=35%  Similarity=0.480  Sum_probs=69.2

Q ss_pred             hccccccceecccCceeEEEEEcC--CCc--EEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCcee
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGVLP--SGQ--EIAVKRLSRS---SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEK  417 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~l~--~g~--~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~  417 (451)
                      .++|+..+.||+|+||.||++...  ++.  .||||.+...   .....+.+.+|+.++.+++||||+++++++... ..
T Consensus        17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-~~   95 (291)
T 1u46_A           17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTP-PM   95 (291)
T ss_dssp             GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS-SC
T ss_pred             hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccC-Cc
Confidence            356888899999999999999842  333  6899988654   223457899999999999999999999998765 48


Q ss_pred             eEEEeccCCCCHHHHHhcc
Q 013018          418 ILVYEFVPNKSLDYFLYAQ  436 (451)
Q Consensus       418 ~lv~ey~~~GsL~~~L~~~  436 (451)
                      ++|+||+++|+|.+++...
T Consensus        96 ~~v~e~~~~~~L~~~l~~~  114 (291)
T 1u46_A           96 KMVTELAPLGSLLDRLRKH  114 (291)
T ss_dssp             EEEEECCTTCBHHHHHHHH
T ss_pred             eeeEecccCCCHHHHHHhc
Confidence            8999999999999999864

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=98.97  E-value=7.3e-10  Score=108.99  Aligned_cols=89  Identities=25%  Similarity=0.403  Sum_probs=69.9

Q ss_pred             ccccccceecccCceeEEEEE-cCCCcEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCc------e
Q 013018          346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRS--SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGE------E  416 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~------~  416 (451)
                      ++|...+.||+|+||.||++. ..+|+.||||++...  .....+.+.+|+.++++++||||+++++++....      .
T Consensus        25 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~  104 (367)
T 1cm8_A           25 AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTD  104 (367)
T ss_dssp             SSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCC
T ss_pred             ceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCce
Confidence            467888999999999999999 467999999999643  2334567999999999999999999999987653      4


Q ss_pred             eeEEEeccCCCCHHHHHhc
Q 013018          417 KILVYEFVPNKSLDYFLYA  435 (451)
Q Consensus       417 ~~lv~ey~~~GsL~~~L~~  435 (451)
                      .+||+||+ +++|.++++.
T Consensus       105 ~~lv~e~~-~~~L~~~~~~  122 (367)
T 1cm8_A          105 FYLVMPFM-GTDLGKLMKH  122 (367)
T ss_dssp             CEEEEECC-SEEHHHHHHH
T ss_pred             EEEEEecC-CCCHHHHHhc
Confidence            59999999 8899999986

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=98.96  E-value=9.7e-11  Score=112.46  Aligned_cols=107  Identities=18%  Similarity=0.333  Sum_probs=86.3

Q ss_pred             ChHHHHHhhccccccceecccCceeEEEEEcCCCcEEEEEEeccCC--hhhHHHHHHHHHHHhcCCCCCcccceeEEEeC
Q 013018          337 DFETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSS--GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEG  414 (451)
Q Consensus       337 ~~~~l~~~~~~~~~~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~  414 (451)
                      ..+++++..++|...+.||+|+||.||++....  .+++|.+....  ....+.+.+|+.++.+++||||+++++++...
T Consensus        24 ~~~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~  101 (319)
T 2y4i_B           24 FLQEWDIPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSP  101 (319)
T ss_dssp             CGGGSSSCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECS
T ss_pred             ccccccCCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecC
Confidence            344555667788999999999999999998743  49999986542  22335688999999999999999999999999


Q ss_pred             ceeeEEEeccCCCCHHHHHhccCCCCCCchhhh
Q 013018          415 EEKILVYEFVPNKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       415 ~~~~lv~ey~~~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                      +..++|+||+++|+|.++++...  ..+++.+.
T Consensus       102 ~~~~iv~e~~~~~~L~~~l~~~~--~~~~~~~~  132 (319)
T 2y4i_B          102 PHLAIITSLCKGRTLYSVVRDAK--IVLDVNKT  132 (319)
T ss_dssp             SCEEEECBCCCSEEHHHHTTSSC--CCCCSHHH
T ss_pred             CceEEEeecccCCcHHHHHHhcC--CCCCHHHH
Confidence            99999999999999999998643  23555443

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=98.96  E-value=4.8e-10  Score=107.46  Aligned_cols=105  Identities=21%  Similarity=0.329  Sum_probs=86.1

Q ss_pred             HHHHHhhccccccceecccCceeEEEEEcCCCcEEEEEEeccC--ChhhHHHHHHHHHHHhcCC--CCCcccceeEEEeC
Q 013018          339 ETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRS--SGQGGQEFKNEVVLVAKLQ--HRNLVRLLGFCLEG  414 (451)
Q Consensus       339 ~~l~~~~~~~~~~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~--h~niv~l~g~~~~~  414 (451)
                      +.+....++|...+.||+|+||.||++...+++.||||.+...  ..+..+.+.+|+.++.+++  |+||+++++++...
T Consensus        21 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~  100 (313)
T 3cek_A           21 QSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITD  100 (313)
T ss_dssp             CEEEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECS
T ss_pred             eeeeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecC
Confidence            3344456678899999999999999999878999999999654  3344578999999999996  59999999999999


Q ss_pred             ceeeEEEeccCCCCHHHHHhccCCCCCCchhhh
Q 013018          415 EEKILVYEFVPNKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       415 ~~~~lv~ey~~~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                      +..++|+| +.+|+|.+++....   .+++.++
T Consensus       101 ~~~~lv~e-~~~~~L~~~l~~~~---~~~~~~~  129 (313)
T 3cek_A          101 QYIYMVME-CGNIDLNSWLKKKK---SIDPWER  129 (313)
T ss_dssp             SEEEEEEC-CCSEEHHHHHHHCS---SCCHHHH
T ss_pred             CEEEEEEe-cCCCcHHHHHHhcC---CCCHHHH
Confidence            99999999 66889999998753   3455443

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=98.95  E-value=1e-09  Score=108.54  Aligned_cols=89  Identities=25%  Similarity=0.461  Sum_probs=70.7

Q ss_pred             HHhhccccccceecccCceeEEEEE-cCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCc-----
Q 013018          342 EVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGE-----  415 (451)
Q Consensus       342 ~~~~~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~-----  415 (451)
                      +...++|...+.||+|+||.||++. ..+|+.||||++.....    ...+|+.+|+.++||||+++++++....     
T Consensus         3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~   78 (383)
T 3eb0_A            3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPK   78 (383)
T ss_dssp             ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEEC------
T ss_pred             ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeeecCccccc
Confidence            4456788999999999999999998 56799999999865432    2347999999999999999999985432     


Q ss_pred             ---------------------------------eeeEEEeccCCCCHHHHHhc
Q 013018          416 ---------------------------------EKILVYEFVPNKSLDYFLYA  435 (451)
Q Consensus       416 ---------------------------------~~~lv~ey~~~GsL~~~L~~  435 (451)
                                                       ..+|||||++ |+|.+.|+.
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~  130 (383)
T 3eb0_A           79 PPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKS  130 (383)
T ss_dssp             -------------------------------CCEEEEEECCCS-EEHHHHHHH
T ss_pred             ccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHH
Confidence                                             3789999998 688888875

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=98.95  E-value=9.6e-10  Score=107.19  Aligned_cols=98  Identities=24%  Similarity=0.386  Sum_probs=78.5

Q ss_pred             ccccccceecccCceeEEEEEc-CCCcEEEEEEeccCCh--hhHHHHHHHHHHHhcCCCCCcccceeEEEeC--------
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSG--QGGQEFKNEVVLVAKLQHRNLVRLLGFCLEG--------  414 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~--------  414 (451)
                      ++|...+.||+|+||.||++.. .+|+.||||++.....  .....+.+|+.++.+++||||+++++++...        
T Consensus        17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   96 (351)
T 3mi9_A           17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK   96 (351)
T ss_dssp             GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred             cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCC
Confidence            5688899999999999999994 6789999999865432  2246788999999999999999999998763        


Q ss_pred             ceeeEEEeccCCCCHHHHHhccCCCCCCchhh
Q 013018          415 EEKILVYEFVPNKSLDYFLYAQSPKNNNNWIG  446 (451)
Q Consensus       415 ~~~~lv~ey~~~GsL~~~L~~~~~~~~l~W~~  446 (451)
                      +..+||+||++ |+|.+.+.....  .+++.+
T Consensus        97 ~~~~lv~e~~~-~~l~~~l~~~~~--~~~~~~  125 (351)
T 3mi9_A           97 GSIYLVFDFCE-HDLAGLLSNVLV--KFTLSE  125 (351)
T ss_dssp             CEEEEEEECCS-EEHHHHHHCTTS--CCCHHH
T ss_pred             ceEEEEEeccC-CCHHHHHhhccC--CCCHHH
Confidence            46899999997 488888876432  244443

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=98.95  E-value=3.4e-10  Score=108.37  Aligned_cols=100  Identities=27%  Similarity=0.401  Sum_probs=74.6

Q ss_pred             hccccccceecccCceeEEEEE-cCCCcEEEEEEeccCChh------hHHHHHHHHHHHhcC----CCCCcccceeEEEe
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQ------GGQEFKNEVVLVAKL----QHRNLVRLLGFCLE  413 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~~------~~~~~~~E~~~l~~l----~h~niv~l~g~~~~  413 (451)
                      .++|...+.||+|+||.||++. ..+++.||||.+......      ....+.+|+.++.++    +|+||+++++++..
T Consensus        30 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~  109 (312)
T 2iwi_A           30 EAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFET  109 (312)
T ss_dssp             ---CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC--
T ss_pred             hhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEec
Confidence            4568889999999999999998 467899999999654321      123466788888888    89999999999988


Q ss_pred             CceeeEEEec-cCCCCHHHHHhccCCCCCCchhhh
Q 013018          414 GEEKILVYEF-VPNKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       414 ~~~~~lv~ey-~~~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                      .+..++|+|| +++++|.+++.....   ++|.+.
T Consensus       110 ~~~~~~v~e~~~~~~~L~~~l~~~~~---~~~~~~  141 (312)
T 2iwi_A          110 QEGFMLVLERPLPAQDLFDYITEKGP---LGEGPS  141 (312)
T ss_dssp             ---CEEEEECCSSEEEHHHHHHHHCS---CCHHHH
T ss_pred             CCeEEEEEEecCCCCCHHHHHHhcCC---CCHHHH
Confidence            8899999999 789999999987442   555443

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=98.95  E-value=5.1e-10  Score=110.41  Aligned_cols=91  Identities=12%  Similarity=0.190  Sum_probs=72.6

Q ss_pred             hccccccceecccCceeEEEEEc-CCCcEEEEEEeccC---ChhhHHHHHHHH---HHHhcCCCCCcccce-------eE
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRS---SGQGGQEFKNEV---VLVAKLQHRNLVRLL-------GF  410 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~---~~~~~~~~~~E~---~~l~~l~h~niv~l~-------g~  410 (451)
                      .++|...+.||+|+||.||++.. .+|+.||||++...   .....+.+.+|+   .++++++||||++++       ++
T Consensus        72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~  151 (377)
T 3byv_A           72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL  151 (377)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred             CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence            45688889999999999999994 57999999999743   334457899999   556666899999998       45


Q ss_pred             EEeCc-----------------eeeEEEeccCCCCHHHHHhcc
Q 013018          411 CLEGE-----------------EKILVYEFVPNKSLDYFLYAQ  436 (451)
Q Consensus       411 ~~~~~-----------------~~~lv~ey~~~GsL~~~L~~~  436 (451)
                      +...+                 ..+|||||+ +|+|.++|+..
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~  193 (377)
T 3byv_A          152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVL  193 (377)
T ss_dssp             EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHH
T ss_pred             hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhc
Confidence            44332                 278999999 68999999864

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=98.95  E-value=2.7e-09  Score=102.86  Aligned_cols=91  Identities=22%  Similarity=0.377  Sum_probs=74.4

Q ss_pred             hhccccccceecccCceeEEEEEc-CCCcEEEEEEeccCC-hhhHHHHHHHHH-HHhcCCCCCcccceeEEEeCceeeEE
Q 013018          344 ATNNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSS-GQGGQEFKNEVV-LVAKLQHRNLVRLLGFCLEGEEKILV  420 (451)
Q Consensus       344 ~~~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~-~~~~~~~~~E~~-~l~~l~h~niv~l~g~~~~~~~~~lv  420 (451)
                      ..++|...+.||+|+||.||++.. .+++.||||.+.... .....++..|+. +++.++||||+++++++...+..++|
T Consensus        20 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv   99 (327)
T 3aln_A           20 TAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWIC   99 (327)
T ss_dssp             CSCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEE
T ss_pred             CHHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEE
Confidence            346788889999999999999995 578999999997653 333456666666 77778999999999999999999999


Q ss_pred             EeccCCCCHHHHHhc
Q 013018          421 YEFVPNKSLDYFLYA  435 (451)
Q Consensus       421 ~ey~~~GsL~~~L~~  435 (451)
                      +||+++ +|.+++..
T Consensus       100 ~e~~~~-~l~~~~~~  113 (327)
T 3aln_A          100 MELMST-SFDKFYKY  113 (327)
T ss_dssp             ECCCSE-EHHHHHHH
T ss_pred             EeecCC-ChHHHHHH
Confidence            999974 88888874

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=98.94  E-value=1.9e-09  Score=103.09  Aligned_cols=102  Identities=29%  Similarity=0.444  Sum_probs=76.9

Q ss_pred             hhccccccceecccCceeEEEEE-cCCCcEEEEEEeccCC-----hhhHHHHHHHHHHHhcC---CCCCcccceeEEEeC
Q 013018          344 ATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSS-----GQGGQEFKNEVVLVAKL---QHRNLVRLLGFCLEG  414 (451)
Q Consensus       344 ~~~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~-----~~~~~~~~~E~~~l~~l---~h~niv~l~g~~~~~  414 (451)
                      ..++|...++||+|+||.||++. ..+++.||||.+....     ......+.+|+.++.++   +||||+++++++...
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~   86 (308)
T 3g33_A            7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS   86 (308)
T ss_dssp             ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred             cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence            35678999999999999999999 4678999999986332     11124677787777766   499999999999875


Q ss_pred             c-----eeeEEEeccCCCCHHHHHhccCCCCCCchhhh
Q 013018          415 E-----EKILVYEFVPNKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       415 ~-----~~~lv~ey~~~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                      .     ..++|+||++ |+|.+++..... ..++|.+.
T Consensus        87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~-~~~~~~~~  122 (308)
T 3g33_A           87 RTDREIKVTLVFEHVD-QDLRTYLDKAPP-PGLPAETI  122 (308)
T ss_dssp             CSSSEEEEEEEEECCC-CBHHHHHHTCCT-TCSCHHHH
T ss_pred             CCCCceeEEEEehhhh-cCHHHHHhhccC-CCCCHHHH
Confidence            4     4789999997 699999987543 22555443

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=98.94  E-value=8.7e-10  Score=106.64  Aligned_cols=90  Identities=33%  Similarity=0.491  Sum_probs=70.8

Q ss_pred             hhccccccceecccCceeEEEEEcCCCcEEEEEEeccCChhhHHHHHHHHHH--HhcCCCCCcccceeEEEe-----Cce
Q 013018          344 ATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVL--VAKLQHRNLVRLLGFCLE-----GEE  416 (451)
Q Consensus       344 ~~~~~~~~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~~~~~~~~~~E~~~--l~~l~h~niv~l~g~~~~-----~~~  416 (451)
                      ..++|...+.||+|+||.||++.. +++.||||++....   ...+..|.++  +..++||||+++++.+..     ...
T Consensus        11 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~   86 (336)
T 3g2f_A           11 DLDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRME   86 (336)
T ss_dssp             CTTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEE
T ss_pred             ChHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccccCCCce
Confidence            345788899999999999999987 78999999996543   2344445444  455899999999986543     235


Q ss_pred             eeEEEeccCCCCHHHHHhccC
Q 013018          417 KILVYEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       417 ~~lv~ey~~~GsL~~~L~~~~  437 (451)
                      .+|||||+++|+|.++|+...
T Consensus        87 ~~lv~e~~~~g~L~~~l~~~~  107 (336)
T 3g2f_A           87 YLLVMEYYPNGSLXKYLSLHT  107 (336)
T ss_dssp             EEEEECCCTTCBHHHHHHHCC
T ss_pred             EEEEEecCCCCcHHHHHhhcc
Confidence            689999999999999998644

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=98.94  E-value=2.2e-09  Score=101.78  Aligned_cols=98  Identities=22%  Similarity=0.356  Sum_probs=81.8

Q ss_pred             hccccccceecccCceeEEEEE-cCCCcEEEEEEeccCChhhHHHHHHHHHHHhcC-CCCCcccceeEEEeCceeeEEEe
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKILVYE  422 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e  422 (451)
                      .++|...+.||+|+||.||++. ..+++.||||.+....  ..+.+.+|+.++.++ +|+|++++++++......++|+|
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e   86 (298)
T 1csn_A            9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID   86 (298)
T ss_dssp             TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred             ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEE
Confidence            3568889999999999999999 5688999999986543  224688999999999 79999999999999999999999


Q ss_pred             ccCCCCHHHHHhccCCCCCCchhhh
Q 013018          423 FVPNKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       423 y~~~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                      |+ +|+|.++++....  .+++.+.
T Consensus        87 ~~-~~~L~~~l~~~~~--~~~~~~~  108 (298)
T 1csn_A           87 LL-GPSLEDLLDLCGR--KFSVKTV  108 (298)
T ss_dssp             CC-CCBHHHHHHHTTT--CCCHHHH
T ss_pred             ec-CCCHHHHHHHhcc--CCCHHHH
Confidence            99 9999999986432  3555443

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=98.94  E-value=1.6e-09  Score=105.43  Aligned_cols=90  Identities=19%  Similarity=0.397  Sum_probs=76.4

Q ss_pred             hccccccceecccCceeEEEEEc-CCCcEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCcccceeEEEeC-----cee
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSS-GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEG-----EEK  417 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-----~~~  417 (451)
                      .++|...+.||+|+||.||++.. .+|+.||||.+.... ......+.+|+.++.+++||||+++++++...     ...
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   89 (353)
T 2b9h_A           10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV   89 (353)
T ss_dssp             CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred             ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence            35688899999999999999994 468999999997543 33456789999999999999999999988654     578


Q ss_pred             eEEEeccCCCCHHHHHhc
Q 013018          418 ILVYEFVPNKSLDYFLYA  435 (451)
Q Consensus       418 ~lv~ey~~~GsL~~~L~~  435 (451)
                      ++|+||++ |+|.+++..
T Consensus        90 ~lv~e~~~-~~L~~~~~~  106 (353)
T 2b9h_A           90 YIIQELMQ-TDLHRVIST  106 (353)
T ss_dssp             EEEECCCS-EEHHHHHHH
T ss_pred             EEEEeccC-ccHHHHHhh
Confidence            99999997 699999986

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=98.94  E-value=1.5e-09  Score=107.49  Aligned_cols=91  Identities=25%  Similarity=0.504  Sum_probs=69.8

Q ss_pred             hccccccceecccCceeEEEEE-cCCCcEEEEEEeccC--ChhhHHHHHHHHHHHhcCC-CCCcccceeEEEeCc--eee
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRS--SGQGGQEFKNEVVLVAKLQ-HRNLVRLLGFCLEGE--EKI  418 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~--~~~  418 (451)
                      .++|...+.||+|+||.||++. ..+++.||||++...  .......+.+|+.++.++. ||||+++++++...+  ..+
T Consensus         8 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~   87 (388)
T 3oz6_A            8 LRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVY   87 (388)
T ss_dssp             HTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEE
T ss_pred             cCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEE
Confidence            4578889999999999999998 567899999998643  3344567889999999997 999999999987544  689


Q ss_pred             EEEeccCCCCHHHHHhcc
Q 013018          419 LVYEFVPNKSLDYFLYAQ  436 (451)
Q Consensus       419 lv~ey~~~GsL~~~L~~~  436 (451)
                      |||||++ |+|.++++..
T Consensus        88 lv~e~~~-~~L~~~~~~~  104 (388)
T 3oz6_A           88 LVFDYME-TDLHAVIRAN  104 (388)
T ss_dssp             EEEECCS-EEHHHHHHHT
T ss_pred             EEecccC-cCHHHHHHcC
Confidence            9999997 6999999863

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=98.94  E-value=1.1e-09  Score=116.15  Aligned_cols=94  Identities=21%  Similarity=0.204  Sum_probs=80.0

Q ss_pred             hhccccccceecccCceeEEEEE-cCCCcEEEEEEeccC---ChhhHHHHHHHHHHHhcC-CCCCcccceeEEEeCceee
Q 013018          344 ATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRS---SGQGGQEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKI  418 (451)
Q Consensus       344 ~~~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~  418 (451)
                      ..++|...++||+|+||.||++. ..+++.||||++...   .....+.+..|..++..+ +||||+++.+++...+.++
T Consensus       339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~  418 (674)
T 3pfq_A          339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY  418 (674)
T ss_dssp             -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred             cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence            45678889999999999999999 456889999999743   223346788999999988 7999999999998889999


Q ss_pred             EEEeccCCCCHHHHHhccC
Q 013018          419 LVYEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       419 lv~ey~~~GsL~~~L~~~~  437 (451)
                      |||||+++|+|.++|+...
T Consensus       419 lV~E~~~gg~L~~~l~~~~  437 (674)
T 3pfq_A          419 FVMEYVNGGDLMYHIQQVG  437 (674)
T ss_dssp             EEEECCCSCBHHHHHHHHS
T ss_pred             EEEeCcCCCcHHHHHHhcC
Confidence            9999999999999998754

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=98.93  E-value=2e-09  Score=105.58  Aligned_cols=91  Identities=18%  Similarity=0.288  Sum_probs=76.8

Q ss_pred             hccccccceecccCceeEEEEE-cCCCcEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCcccceeEEEeC-----cee
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSS-GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEG-----EEK  417 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-----~~~  417 (451)
                      .++|...+.||+|+||.||++. ..+++.||||++.... ....+.+.+|+.++.+++||||+++++++...     ...
T Consensus        26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~  105 (364)
T 3qyz_A           26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV  105 (364)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred             cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence            3468889999999999999998 4578899999997543 33347899999999999999999999998754     368


Q ss_pred             eEEEeccCCCCHHHHHhcc
Q 013018          418 ILVYEFVPNKSLDYFLYAQ  436 (451)
Q Consensus       418 ~lv~ey~~~GsL~~~L~~~  436 (451)
                      ++|+||++ |+|.++++..
T Consensus       106 ~iv~e~~~-~~L~~~l~~~  123 (364)
T 3qyz_A          106 YIVQDLME-TDLYKLLKTQ  123 (364)
T ss_dssp             EEEEECCS-EEHHHHHHHC
T ss_pred             EEEEcccC-cCHHHHHHhC
Confidence            99999997 6999999863

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=98.93  E-value=1.3e-09  Score=110.56  Aligned_cols=90  Identities=22%  Similarity=0.351  Sum_probs=74.6

Q ss_pred             hccccccceecccCceeEEEEE-cCCCcEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeC------c
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRS--SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEG------E  415 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~------~  415 (451)
                      .++|...++||+|+||.||++. ..+++.||||++...  .....+.+.+|+.+|++++||||+++++++...      .
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~  140 (464)
T 3ttj_A           61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ  140 (464)
T ss_dssp             ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred             cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence            3568889999999999999998 557899999999754  334457899999999999999999999998654      3


Q ss_pred             eeeEEEeccCCCCHHHHHhc
Q 013018          416 EKILVYEFVPNKSLDYFLYA  435 (451)
Q Consensus       416 ~~~lv~ey~~~GsL~~~L~~  435 (451)
                      ..+|||||+++ +|.+.++.
T Consensus       141 ~~~lv~E~~~~-~l~~~~~~  159 (464)
T 3ttj_A          141 DVYLVMELMDA-NLCQVIQM  159 (464)
T ss_dssp             EEEEEEECCSE-EHHHHHTS
T ss_pred             eEEEEEeCCCC-CHHHHHhh
Confidence            57999999976 57776653

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=98.92  E-value=2.3e-09  Score=105.49  Aligned_cols=89  Identities=21%  Similarity=0.344  Sum_probs=75.3

Q ss_pred             ccccccceecccCceeEEEEE-cCCCcEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCc------e
Q 013018          346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRS--SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGE------E  416 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~------~  416 (451)
                      ++|...+.||+|+||.||++. ..+++.||||++...  .....+.+.+|+.++++++||||+++++++...+      .
T Consensus        25 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~  104 (371)
T 2xrw_A           25 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQD  104 (371)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCE
T ss_pred             hheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccc
Confidence            568889999999999999998 557899999999753  2334567899999999999999999999987654      6


Q ss_pred             eeEEEeccCCCCHHHHHhc
Q 013018          417 KILVYEFVPNKSLDYFLYA  435 (451)
Q Consensus       417 ~~lv~ey~~~GsL~~~L~~  435 (451)
                      .++||||++ |+|.+++..
T Consensus       105 ~~lv~e~~~-~~l~~~~~~  122 (371)
T 2xrw_A          105 VYIVMELMD-ANLCQVIQM  122 (371)
T ss_dssp             EEEEEECCS-EEHHHHHHS
T ss_pred             eEEEEEcCC-CCHHHHHhh
Confidence            799999997 578888863

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=98.92  E-value=8.4e-10  Score=107.45  Aligned_cols=100  Identities=17%  Similarity=0.172  Sum_probs=74.3

Q ss_pred             hccccccceecccCceeEEEEEcC----CCcEEEEEEeccCChhh-----------HHHHHHHHHHHhcCCCCCccccee
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGVLP----SGQEIAVKRLSRSSGQG-----------GQEFKNEVVLVAKLQHRNLVRLLG  409 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~l~----~g~~vavK~l~~~~~~~-----------~~~~~~E~~~l~~l~h~niv~l~g  409 (451)
                      .++|...+.||+|+||.||++...    .+..+|||.+.......           ...+.+|+..+..++||||+++++
T Consensus        36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~  115 (345)
T 2v62_A           36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG  115 (345)
T ss_dssp             SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred             CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence            356888899999999999999964    56789999987543211           134778899999999999999999


Q ss_pred             EEEe----CceeeEEEeccCCCCHHHHHhccCCCCCCchhhhh
Q 013018          410 FCLE----GEEKILVYEFVPNKSLDYFLYAQSPKNNNNWIGQD  448 (451)
Q Consensus       410 ~~~~----~~~~~lv~ey~~~GsL~~~L~~~~~~~~l~W~~r~  448 (451)
                      ++..    ....+|||||+ +|+|.+++....   .++|.+..
T Consensus       116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~---~~~~~~~~  154 (345)
T 2v62_A          116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQNG---TFKKSTVL  154 (345)
T ss_dssp             EEEEESSSCEEEEEEEECE-EEEHHHHCBGGG---BCCHHHHH
T ss_pred             ccccccCCCcEEEEEEecc-CCCHHHHHHhcC---CCCHHHHH
Confidence            9987    67889999999 999999998654   46665543

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=98.91  E-value=1.4e-10  Score=112.57  Aligned_cols=90  Identities=20%  Similarity=0.299  Sum_probs=70.9

Q ss_pred             hccccccceecccCceeEEEEEcCCCcEEEEEEeccCC--------hhhHHHHHHHHHHHhcCC---------CCCcccc
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSS--------GQGGQEFKNEVVLVAKLQ---------HRNLVRL  407 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~--------~~~~~~~~~E~~~l~~l~---------h~niv~l  407 (451)
                      .++|...+.||+|+||.||++.. +|+.||||++....        ....+.+.+|+.++++++         ||||+++
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l   97 (336)
T 2vuw_A           19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL   97 (336)
T ss_dssp             HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred             cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence            45678889999999999999998 78999999997542        223467889999888875         7777777


Q ss_pred             eeEEE------------------------------eCceeeEEEeccCCCCHHHHHhc
Q 013018          408 LGFCL------------------------------EGEEKILVYEFVPNKSLDYFLYA  435 (451)
Q Consensus       408 ~g~~~------------------------------~~~~~~lv~ey~~~GsL~~~L~~  435 (451)
                      .+...                              ..+..+|||||+++|++.+.+.+
T Consensus        98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~  155 (336)
T 2vuw_A           98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT  155 (336)
T ss_dssp             EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT
T ss_pred             cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh
Confidence            77643                              15789999999999977666643

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=98.91  E-value=2.4e-09  Score=105.35  Aligned_cols=89  Identities=26%  Similarity=0.461  Sum_probs=75.3

Q ss_pred             ccccccceecccCceeEEEEE-cCCCcEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCcee-----
Q 013018          346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRS--SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEK-----  417 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-----  417 (451)
                      ++|...+.||+|+||.||++. ..+|+.||||++...  .....+.+.+|+.++++++||||+++++++...+..     
T Consensus        42 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~  121 (371)
T 4exu_A           42 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD  121 (371)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCC
T ss_pred             ccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCccccee
Confidence            467888999999999999998 557899999999754  233357899999999999999999999999876654     


Q ss_pred             -eEEEeccCCCCHHHHHhc
Q 013018          418 -ILVYEFVPNKSLDYFLYA  435 (451)
Q Consensus       418 -~lv~ey~~~GsL~~~L~~  435 (451)
                       ++|+||++ |+|.+++..
T Consensus       122 ~~lv~e~~~-~~l~~~~~~  139 (371)
T 4exu_A          122 FYLVMPFMQ-TDLQKIMGM  139 (371)
T ss_dssp             CEEEEECCC-EEHHHHTTS
T ss_pred             EEEEEcccc-ccHHHHhhc
Confidence             99999997 689888753

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=98.90  E-value=1.9e-09  Score=105.72  Aligned_cols=102  Identities=18%  Similarity=0.196  Sum_probs=77.9

Q ss_pred             hhccccccceecccCceeEEEEEcCC------CcEEEEEEeccCChhhH-----------HHHHHHHHHHhcCCCCCccc
Q 013018          344 ATNNFSTDNKLGEGGFGEVYKGVLPS------GQEIAVKRLSRSSGQGG-----------QEFKNEVVLVAKLQHRNLVR  406 (451)
Q Consensus       344 ~~~~~~~~~~lG~G~fg~V~~~~l~~------g~~vavK~l~~~~~~~~-----------~~~~~E~~~l~~l~h~niv~  406 (451)
                      ..++|...+.||+|+||.||++....      ++.||||.+........           ..+..|+..+..++||||++
T Consensus        33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~  112 (364)
T 3op5_A           33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK  112 (364)
T ss_dssp             TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred             CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence            34578889999999999999998644      47899999876542211           23456777788899999999


Q ss_pred             ceeEEEeC----ceeeEEEeccCCCCHHHHHhccCCCCCCchhhhh
Q 013018          407 LLGFCLEG----EEKILVYEFVPNKSLDYFLYAQSPKNNNNWIGQD  448 (451)
Q Consensus       407 l~g~~~~~----~~~~lv~ey~~~GsL~~~L~~~~~~~~l~W~~r~  448 (451)
                      +++++...    ...+|||||+ +|+|.+++....  ..++|.+++
T Consensus       113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~--~~l~~~~~~  155 (364)
T 3op5_A          113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANA--KRFSRKTVL  155 (364)
T ss_dssp             EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTT--SCCCHHHHH
T ss_pred             EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhcc--CCCCHHHHH
Confidence            99998764    4579999999 999999998742  346776554

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=98.90  E-value=1.5e-09  Score=106.80  Aligned_cols=89  Identities=24%  Similarity=0.409  Sum_probs=68.0

Q ss_pred             ccccccceecccCceeEEEEE-cCCCcEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeC------ce
Q 013018          346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRS--SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEG------EE  416 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~------~~  416 (451)
                      ++|...+.||+|+||.||++. ..+|+.||||++...  .....+.+.+|+.++++++||||+++++++...      ..
T Consensus        29 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~  108 (367)
T 2fst_X           29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFND  108 (367)
T ss_dssp             TTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred             CceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCe
Confidence            568889999999999999998 567899999999653  333457789999999999999999999998653      46


Q ss_pred             eeEEEeccCCCCHHHHHhc
Q 013018          417 KILVYEFVPNKSLDYFLYA  435 (451)
Q Consensus       417 ~~lv~ey~~~GsL~~~L~~  435 (451)
                      .++|+||+ +++|.++++.
T Consensus       109 ~~lv~e~~-~~~L~~~~~~  126 (367)
T 2fst_X          109 VYLVTHLM-GADLNNIVKC  126 (367)
T ss_dssp             CEEEEECC-CEECC-----
T ss_pred             EEEEeccc-CCCHHHHHhc
Confidence            79999999 6899998875

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=98.90  E-value=7.3e-10  Score=108.16  Aligned_cols=96  Identities=16%  Similarity=0.147  Sum_probs=76.6

Q ss_pred             ccccccceecccCceeEEEEEcC---------CCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccc----------
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVLP---------SGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVR----------  406 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l~---------~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~----------  406 (451)
                      ++|...+.||+|+||.||++...         .++.||||.+...     +.+.+|+.++.+++||||++          
T Consensus        42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~  116 (352)
T 2jii_A           42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPL  116 (352)
T ss_dssp             CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTT
T ss_pred             CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCc
Confidence            56888999999999999999954         3789999998754     36889999999999999987          


Q ss_pred             -----ceeEEEe-CceeeEEEeccCCCCHHHHHhccCCCCCCchhhhh
Q 013018          407 -----LLGFCLE-GEEKILVYEFVPNKSLDYFLYAQSPKNNNNWIGQD  448 (451)
Q Consensus       407 -----l~g~~~~-~~~~~lv~ey~~~GsL~~~L~~~~~~~~l~W~~r~  448 (451)
                           +++++.. ....+|||||+ +|+|.++|.... ...++|.+.+
T Consensus       117 ~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-~~~l~~~~~~  162 (352)
T 2jii_A          117 LAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSP-KHVLSERSVL  162 (352)
T ss_dssp             CSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSG-GGCCCHHHHH
T ss_pred             cCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCC-cCCCCHHHHH
Confidence                 5677766 67889999999 999999999642 2346665543

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=98.88  E-value=2.4e-09  Score=102.93  Aligned_cols=102  Identities=26%  Similarity=0.410  Sum_probs=77.5

Q ss_pred             hhccccccceecccCceeEEEEEc--CCCcEEEEEEeccCCh--hhHHHHHHHHHHHhcC---CCCCcccceeEEE----
Q 013018          344 ATNNFSTDNKLGEGGFGEVYKGVL--PSGQEIAVKRLSRSSG--QGGQEFKNEVVLVAKL---QHRNLVRLLGFCL----  412 (451)
Q Consensus       344 ~~~~~~~~~~lG~G~fg~V~~~~l--~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l---~h~niv~l~g~~~----  412 (451)
                      ..++|...+.||+|+||.||++..  .+++.||||.+.....  .....+.+|+.++..+   +||||+++++++.    
T Consensus         9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~   88 (326)
T 1blx_A            9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT   88 (326)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred             chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence            346788899999999999999995  4688999999864321  1223566777776665   8999999999987    


Q ss_pred             -eCceeeEEEeccCCCCHHHHHhccCCCCCCchhhh
Q 013018          413 -EGEEKILVYEFVPNKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       413 -~~~~~~lv~ey~~~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                       .....++|+||++ |+|.+++..... ..+++.+.
T Consensus        89 ~~~~~~~lv~e~~~-~~L~~~l~~~~~-~~~~~~~~  122 (326)
T 1blx_A           89 DRETKLTLVFEHVD-QDLTTYLDKVPE-PGVPTETI  122 (326)
T ss_dssp             SSEEEEEEEEECCS-CBHHHHHHHSCT-TCSCHHHH
T ss_pred             CCCceEEEEEecCC-CCHHHHHHhccc-CCCCHHHH
Confidence             4457889999997 799999987543 23555443

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=98.87  E-value=2.5e-09  Score=104.43  Aligned_cols=94  Identities=24%  Similarity=0.354  Sum_probs=64.6

Q ss_pred             HHHHHhhccccccceecccCceeEEEEEc-CCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCce-
Q 013018          339 ETIEVATNNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEE-  416 (451)
Q Consensus       339 ~~l~~~~~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~-  416 (451)
                      .......++|...+.||+|+||.||++.. .+++.||||++.... .....+.+|+..+..++||||+++++++...+. 
T Consensus        16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~   94 (360)
T 3e3p_A           16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGER   94 (360)
T ss_dssp             HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred             hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence            44556678899999999999999999994 568999999986542 223456788888889999999999999876433 


Q ss_pred             ------eeEEEeccCCCCHHHHHh
Q 013018          417 ------KILVYEFVPNKSLDYFLY  434 (451)
Q Consensus       417 ------~~lv~ey~~~GsL~~~L~  434 (451)
                            .++||||+++ +|.+.+.
T Consensus        95 ~~~~~~~~lv~e~~~~-~l~~~~~  117 (360)
T 3e3p_A           95 DRRDIYLNVVMEYVPD-TLHRCCR  117 (360)
T ss_dssp             CTTCEEEEEEEECCSC-BHHHHHH
T ss_pred             cccceeEEEEeecccc-cHHHHHH
Confidence                  7899999986 5655554

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=98.85  E-value=6.9e-09  Score=100.61  Aligned_cols=98  Identities=18%  Similarity=0.136  Sum_probs=71.9

Q ss_pred             hcccccc-ceecccCceeEEEEEc-CCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEe----Cceee
Q 013018          345 TNNFSTD-NKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLE----GEEKI  418 (451)
Q Consensus       345 ~~~~~~~-~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~----~~~~~  418 (451)
                      .++|... ++||+|+||.||++.. .+++.||||++.... ....+   ....+..++||||+++++++..    ....+
T Consensus        27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~e---~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~  102 (336)
T 3fhr_A           27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP-KARQE---VDHHWQASGGPHIVCILDVYENMHHGKRCLL  102 (336)
T ss_dssp             GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH-HHHHH---HHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred             cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH-HHHHH---HHHHHHhcCCCChHHHHHHHhhccCCCceEE
Confidence            3456664 4699999999999994 478999999996532 11122   2233556799999999999876    34588


Q ss_pred             EEEeccCCCCHHHHHhccCCCCCCchhhh
Q 013018          419 LVYEFVPNKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       419 lv~ey~~~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                      |||||+++|+|.+++..... ..++|.+.
T Consensus       103 lv~e~~~gg~L~~~l~~~~~-~~l~~~~~  130 (336)
T 3fhr_A          103 IIMECMEGGELFSRIQERGD-QAFTEREA  130 (336)
T ss_dssp             EEEECCTTEEHHHHHHTC-C-CCCBHHHH
T ss_pred             EEEeccCCCCHHHHHHhcCC-CCCCHHHH
Confidence            99999999999999997532 34666544

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=98.85  E-value=3.1e-09  Score=103.63  Aligned_cols=89  Identities=26%  Similarity=0.454  Sum_probs=74.0

Q ss_pred             ccccccceecccCceeEEEEE-cCCCcEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCce------
Q 013018          346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRS--SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEE------  416 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~------  416 (451)
                      ++|...+.||+|+||.||++. ..+|+.||||.+...  .....+.+.+|+.++.+++||||+++++++...+.      
T Consensus        24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~  103 (353)
T 3coi_A           24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD  103 (353)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred             ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccccee
Confidence            457788999999999999999 457899999999654  23335679999999999999999999999876543      


Q ss_pred             eeEEEeccCCCCHHHHHhc
Q 013018          417 KILVYEFVPNKSLDYFLYA  435 (451)
Q Consensus       417 ~~lv~ey~~~GsL~~~L~~  435 (451)
                      .++|+||++ |+|.+++..
T Consensus       104 ~~lv~e~~~-~~l~~~~~~  121 (353)
T 3coi_A          104 FYLVMPFMQ-TDLQKIMGL  121 (353)
T ss_dssp             CEEEEECCS-EEGGGTTTS
T ss_pred             EEEEecccc-CCHHHHhcC
Confidence            489999997 688877653

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=98.84  E-value=8.5e-09  Score=103.56  Aligned_cols=100  Identities=15%  Similarity=0.204  Sum_probs=79.8

Q ss_pred             hccccccceecccCceeEEEEE-cCCCcEEEEEEeccCChhhHHHHHHHHHHHhcC------CCCCcccceeEEEeCcee
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKL------QHRNLVRLLGFCLEGEEK  417 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l------~h~niv~l~g~~~~~~~~  417 (451)
                      ..+|...++||+|+||.||++. ...++.||||++... ....+.+.+|+.++..+      +|+||+++++.+......
T Consensus        96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  174 (429)
T 3kvw_A           96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHI  174 (429)
T ss_dssp             TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEE
T ss_pred             cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeE
Confidence            3468889999999999999998 456899999999754 23345677888877766      578999999999999999


Q ss_pred             eEEEeccCCCCHHHHHhccCCCCCCchhhh
Q 013018          418 ILVYEFVPNKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       418 ~lv~ey~~~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                      +||+||+. |+|.+++..... ..++|...
T Consensus       175 ~lv~e~~~-~~L~~~l~~~~~-~~~~~~~~  202 (429)
T 3kvw_A          175 CMTFELLS-MNLYELIKKNKF-QGFSLPLV  202 (429)
T ss_dssp             EEEECCCC-CBHHHHHHHTTT-CCCCHHHH
T ss_pred             EEEEeccC-CCHHHHHHhccC-CCCCHHHH
Confidence            99999996 699999987543 23565543

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=98.83  E-value=5.1e-09  Score=105.33  Aligned_cols=86  Identities=20%  Similarity=0.176  Sum_probs=72.1

Q ss_pred             ccccceecccCceeEEEEEcCCCcEEEEEEeccCChhhHHHHHHHHHHHhcC-CCCCcccceeEEEeCceeeEEEeccCC
Q 013018          348 FSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKILVYEFVPN  426 (451)
Q Consensus       348 ~~~~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lv~ey~~~  426 (451)
                      +...++||+|+||+||.....+|+.||||++...   ..+.+.+|+.++.++ +||||+++++.+...+..+||+||++ 
T Consensus        17 ~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-   92 (434)
T 2rio_A           17 VVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-   92 (434)
T ss_dssp             EEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-
T ss_pred             eeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-
Confidence            3446789999999997666558999999998643   235678999999876 89999999999998899999999995 


Q ss_pred             CCHHHHHhccC
Q 013018          427 KSLDYFLYAQS  437 (451)
Q Consensus       427 GsL~~~L~~~~  437 (451)
                      |+|.+++....
T Consensus        93 gsL~~~l~~~~  103 (434)
T 2rio_A           93 LNLQDLVESKN  103 (434)
T ss_dssp             EEHHHHHHTC-
T ss_pred             CCHHHHHhccC
Confidence            79999998754

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=98.81  E-value=8.1e-09  Score=102.78  Aligned_cols=82  Identities=22%  Similarity=0.392  Sum_probs=64.2

Q ss_pred             cceecccCceeEEEEEcC---CCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEe--CceeeEEEeccC
Q 013018          351 DNKLGEGGFGEVYKGVLP---SGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLE--GEEKILVYEFVP  425 (451)
Q Consensus       351 ~~~lG~G~fg~V~~~~l~---~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~--~~~~~lv~ey~~  425 (451)
                      .++||+|+||.||++...   .++.||||.+....  ....+.+|+.+|.+++||||+++++++..  ....+||+||++
T Consensus        26 g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~~~  103 (405)
T 3rgf_A           26 GCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE  103 (405)
T ss_dssp             SCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEECCS
T ss_pred             CcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeCCC
Confidence            458999999999999954   57889999997543  22578899999999999999999999965  568899999996


Q ss_pred             CCCHHHHHhc
Q 013018          426 NKSLDYFLYA  435 (451)
Q Consensus       426 ~GsL~~~L~~  435 (451)
                       |+|.+++..
T Consensus       104 -~~l~~~~~~  112 (405)
T 3rgf_A          104 -HDLWHIIKF  112 (405)
T ss_dssp             -EEHHHHHHH
T ss_pred             -CCHHHHHHH
Confidence             588888874

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=98.81  E-value=6.7e-09  Score=102.58  Aligned_cols=98  Identities=17%  Similarity=0.232  Sum_probs=76.9

Q ss_pred             ccccccceecccCceeEEEEE-cCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCC--------CCCcccceeEEE----
Q 013018          346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQ--------HRNLVRLLGFCL----  412 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~--------h~niv~l~g~~~----  412 (451)
                      ++|...++||+|+||.||++. ..+++.||||.+... ....+.+.+|+.++.+++        |+||+++++.+.    
T Consensus        37 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~  115 (397)
T 1wak_A           37 GRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGV  115 (397)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEET
T ss_pred             CeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCC
Confidence            568889999999999999998 567899999999744 334577899999999885        788999999887    


Q ss_pred             eCceeeEEEeccCCCCHHHHHhccCCCCCCchhh
Q 013018          413 EGEEKILVYEFVPNKSLDYFLYAQSPKNNNNWIG  446 (451)
Q Consensus       413 ~~~~~~lv~ey~~~GsL~~~L~~~~~~~~l~W~~  446 (451)
                      .....+|||||+ +|+|.+++..... ..+++.+
T Consensus       116 ~~~~~~lv~e~~-~~~l~~~~~~~~~-~~~~~~~  147 (397)
T 1wak_A          116 NGTHICMVFEVL-GHHLLKWIIKSNY-QGLPLPC  147 (397)
T ss_dssp             TEEEEEEEECCC-CCBHHHHHHHTTT-SCCCHHH
T ss_pred             CCceEEEEEecc-CccHHHHHHhccc-CCCCHHH
Confidence            455789999999 6677777765332 2355543

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=98.81  E-value=2.8e-09  Score=106.73  Aligned_cols=94  Identities=28%  Similarity=0.436  Sum_probs=71.3

Q ss_pred             cccccceecccCceeEEEEEc-CCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCc------eeeE
Q 013018          347 NFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGE------EKIL  419 (451)
Q Consensus       347 ~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~------~~~l  419 (451)
                      +|...++||+|+||.||++.. .+|+.||||++....    ..+.+|+.+|++++||||+++++++....      ..++
T Consensus        55 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~l  130 (420)
T 1j1b_A           55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL  130 (420)
T ss_dssp             EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEE
T ss_pred             eEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEe
Confidence            477789999999999999995 568999999986542    22347999999999999999999886421      3679


Q ss_pred             EEeccCCCCHHHHHhcc-CCCCCCchh
Q 013018          420 VYEFVPNKSLDYFLYAQ-SPKNNNNWI  445 (451)
Q Consensus       420 v~ey~~~GsL~~~L~~~-~~~~~l~W~  445 (451)
                      |+||+++ +|.++++.. ..+..++|.
T Consensus       131 v~e~~~~-~l~~~~~~~~~~~~~l~~~  156 (420)
T 1j1b_A          131 VLDYVPE-TVYRVARHYSRAKQTLPVI  156 (420)
T ss_dssp             EEECCCE-EHHHHHHHHHHTTCCCCHH
T ss_pred             ehhcccc-cHHHHHHHHhhccCCCCHH
Confidence            9999975 677666532 223345554

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=98.80  E-value=8.1e-09  Score=106.71  Aligned_cols=85  Identities=9%  Similarity=0.140  Sum_probs=64.2

Q ss_pred             ccceecccCceeEEEEEcCCCcEEEEEEeccCCh--------hhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEE
Q 013018          350 TDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSG--------QGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  421 (451)
Q Consensus       350 ~~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~~--------~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~  421 (451)
                      ..++||+|+||.||++.. .+..+++|+......        ...+.+.+|++++++++||||+++..++...++.+|||
T Consensus       340 ~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVm  418 (540)
T 3en9_A          340 PEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMM  418 (540)
T ss_dssp             --------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEE
T ss_pred             CCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEE
Confidence            467899999999999966 678889988653311        11345899999999999999998878887888899999


Q ss_pred             eccCCCCHHHHHhc
Q 013018          422 EFVPNKSLDYFLYA  435 (451)
Q Consensus       422 ey~~~GsL~~~L~~  435 (451)
                      ||+++|+|.++|+.
T Consensus       419 E~~~ggsL~~~l~~  432 (540)
T 3en9_A          419 SYINGKLAKDVIED  432 (540)
T ss_dssp             ECCCSEEHHHHSTT
T ss_pred             ECCCCCCHHHHHHH
Confidence            99999999999886

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=98.79  E-value=7e-09  Score=104.24  Aligned_cols=90  Identities=19%  Similarity=0.276  Sum_probs=74.4

Q ss_pred             hhccccccceecccCceeEEEEEcCCCcEEEEEEeccCChhhHHHHHHHHHHHhcC-CCCCcccceeEEEeCceeeEEEe
Q 013018          344 ATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKILVYE  422 (451)
Q Consensus       344 ~~~~~~~~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e  422 (451)
                      ...+|...++||+|+||.|+.....+++.||||++.....   ..+.+|+.++.++ +||||+++++.+......+||+|
T Consensus        22 ~~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E   98 (432)
T 3p23_A           22 GKISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF---SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIE   98 (432)
T ss_dssp             TTEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE---EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             ccEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH---HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEE
Confidence            3456788899999999996554445889999999965432   2356899999999 79999999999999999999999


Q ss_pred             ccCCCCHHHHHhccC
Q 013018          423 FVPNKSLDYFLYAQS  437 (451)
Q Consensus       423 y~~~GsL~~~L~~~~  437 (451)
                      |++ |+|.+++....
T Consensus        99 ~~~-g~L~~~l~~~~  112 (432)
T 3p23_A           99 LCA-ATLQEYVEQKD  112 (432)
T ss_dssp             CCS-EEHHHHHHSSS
T ss_pred             CCC-CCHHHHHHhcC
Confidence            996 69999998754

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=98.79  E-value=1.5e-08  Score=95.80  Aligned_cols=98  Identities=22%  Similarity=0.408  Sum_probs=78.3

Q ss_pred             hccccccceecccCceeEEEEE-cCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEE-EeCceeeEEEe
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFC-LEGEEKILVYE  422 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~-~~~~~~~lv~e  422 (451)
                      .++|...+.||+|+||.||++. ..+++.||||.+.....  .+++.+|+.++.+++|++++..++.+ ...+..++|+|
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e   85 (296)
T 3uzp_A            8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME   85 (296)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred             ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEE
Confidence            3568889999999999999999 46899999999865432  24689999999999998877777666 45667899999


Q ss_pred             ccCCCCHHHHHhccCCCCCCchhhh
Q 013018          423 FVPNKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       423 y~~~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                      |+ +|+|.+++.....  .+++.+.
T Consensus        86 ~~-~~~L~~~~~~~~~--~~~~~~~  107 (296)
T 3uzp_A           86 LL-GPSLEDLFNFCSR--KFSLKTV  107 (296)
T ss_dssp             CC-CCBHHHHHHHTTT--CCCHHHH
T ss_pred             ec-CCCHHHHHHhhcc--CCCHHHH
Confidence            99 9999999985332  3555544

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=98.79  E-value=5.5e-09  Score=103.71  Aligned_cols=84  Identities=24%  Similarity=0.409  Sum_probs=66.3

Q ss_pred             ccccccceecccCceeEEEEEcCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCce------eeE
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEE------KIL  419 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~------~~l  419 (451)
                      .+|...++||+|+||.||++....+..+|+|++.....    ...+|+.+|+.++||||+++++++.....      .++
T Consensus        40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l  115 (394)
T 4e7w_A           40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNL  115 (394)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEE
T ss_pred             ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEE
Confidence            45788899999999999999976777799998864422    22379999999999999999999865432      789


Q ss_pred             EEeccCCCCHHHHH
Q 013018          420 VYEFVPNKSLDYFL  433 (451)
Q Consensus       420 v~ey~~~GsL~~~L  433 (451)
                      ||||++++.+....
T Consensus       116 v~e~~~~~l~~~~~  129 (394)
T 4e7w_A          116 VLEYVPETVYRASR  129 (394)
T ss_dssp             EEECCSEEHHHHHH
T ss_pred             EeeccCccHHHHHH
Confidence            99999875444333

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=98.78  E-value=1.1e-08  Score=98.51  Aligned_cols=97  Identities=20%  Similarity=0.291  Sum_probs=78.9

Q ss_pred             ccccccceecccCceeEEEEEc--CCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCC------CcccceeEEEeCcee
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVL--PSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHR------NLVRLLGFCLEGEEK  417 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l--~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~------niv~l~g~~~~~~~~  417 (451)
                      ++|...+.||+|+||.||++..  .+++.||||.+... ....+.+.+|+.++..++|+      +++++++++...+..
T Consensus        14 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~   92 (339)
T 1z57_A           14 ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHI   92 (339)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEE
T ss_pred             CceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcE
Confidence            4688899999999999999984  46889999999654 33456788999999888655      499999999999999


Q ss_pred             eEEEeccCCCCHHHHHhccCCCCCCchh
Q 013018          418 ILVYEFVPNKSLDYFLYAQSPKNNNNWI  445 (451)
Q Consensus       418 ~lv~ey~~~GsL~~~L~~~~~~~~l~W~  445 (451)
                      +|||||+ +++|.+++..... ..+++.
T Consensus        93 ~lv~e~~-~~~l~~~l~~~~~-~~~~~~  118 (339)
T 1z57_A           93 CIVFELL-GLSTYDFIKENGF-LPFRLD  118 (339)
T ss_dssp             EEEEECC-CCBHHHHHHHTTT-CCCCHH
T ss_pred             EEEEcCC-CCCHHHHHHhcCC-CCCcHH
Confidence            9999999 8999999987542 234443

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=98.78  E-value=9.4e-09  Score=98.34  Aligned_cols=90  Identities=19%  Similarity=0.338  Sum_probs=64.9

Q ss_pred             hhccccccceecccCceeEEEEEc-CCCcEEEEEEeccCCh-hhH-HHHHHHHHHHhcCCCCCcccceeEEEeCceeeEE
Q 013018          344 ATNNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSG-QGG-QEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILV  420 (451)
Q Consensus       344 ~~~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~~-~~~-~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv  420 (451)
                      ..++|...+.||+|+||.||++.. .+|+.||||.+..... ... +.+.++..++..++||||+++++++...+..++|
T Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv  102 (318)
T 2dyl_A           23 EINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIA  102 (318)
T ss_dssp             CGGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             hhccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEE
Confidence            345678889999999999999995 4789999999975532 222 3445555678888999999999999999999999


Q ss_pred             EeccCCCCHHHHHh
Q 013018          421 YEFVPNKSLDYFLY  434 (451)
Q Consensus       421 ~ey~~~GsL~~~L~  434 (451)
                      +||+ ++.+..++.
T Consensus       103 ~e~~-~~~~~~l~~  115 (318)
T 2dyl_A          103 MELM-GTCAEKLKK  115 (318)
T ss_dssp             ECCC-SEEHHHHHH
T ss_pred             Eecc-CCcHHHHHH
Confidence            9999 445555544

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=98.77  E-value=1.6e-08  Score=95.63  Aligned_cols=98  Identities=22%  Similarity=0.408  Sum_probs=75.3

Q ss_pred             hccccccceecccCceeEEEEE-cCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEE-EeCceeeEEEe
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFC-LEGEEKILVYE  422 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~-~~~~~~~lv~e  422 (451)
                      .++|...+.||+|+||.||++. ..+++.||||.+.....  ...+.+|+.++.+++|+|++..++.+ ...+..++|+|
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e   85 (296)
T 4hgt_A            8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME   85 (296)
T ss_dssp             ---CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred             CCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEE
Confidence            4678899999999999999999 46789999998754422  23588999999999988888777766 45677899999


Q ss_pred             ccCCCCHHHHHhccCCCCCCchhhh
Q 013018          423 FVPNKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       423 y~~~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                      |+ +|+|.+++.....  .++|.+.
T Consensus        86 ~~-~~~L~~~~~~~~~--~~~~~~~  107 (296)
T 4hgt_A           86 LL-GPSLEDLFNFCSR--KFSLKTV  107 (296)
T ss_dssp             CC-CCBHHHHHHHTTS--CCCHHHH
T ss_pred             cc-CCCHHHHHHHhcC--CCCHHHH
Confidence            99 9999999985332  3555544

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=98.74  E-value=4.2e-09  Score=101.37  Aligned_cols=94  Identities=26%  Similarity=0.474  Sum_probs=78.6

Q ss_pred             hhccccccceecccCceeEEEEE-cCCCcEEEEEEeccCChh------hHHHHHHHHHHHhcCC--CCCcccceeEEEeC
Q 013018          344 ATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQ------GGQEFKNEVVLVAKLQ--HRNLVRLLGFCLEG  414 (451)
Q Consensus       344 ~~~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~~------~~~~~~~E~~~l~~l~--h~niv~l~g~~~~~  414 (451)
                      ..++|...+.||+|+||.||++. ..+++.||||.+......      ..+.+.+|+.++.+++  |+||+++++++...
T Consensus        41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~  120 (320)
T 3a99_A           41 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP  120 (320)
T ss_dssp             CTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECS
T ss_pred             ccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecC
Confidence            45668889999999999999998 567899999999654211      1245778999999986  59999999999999


Q ss_pred             ceeeEEEeccCC-CCHHHHHhccC
Q 013018          415 EEKILVYEFVPN-KSLDYFLYAQS  437 (451)
Q Consensus       415 ~~~~lv~ey~~~-GsL~~~L~~~~  437 (451)
                      +..++|+||+.. ++|.+++....
T Consensus       121 ~~~~lv~e~~~~~~~L~~~l~~~~  144 (320)
T 3a99_A          121 DSFVLILERPEPVQDLFDFITERG  144 (320)
T ss_dssp             SEEEEEEECCSSEEEHHHHHHHHC
T ss_pred             CcEEEEEEcCCCCccHHHHHhccC
Confidence            999999999976 89999998643

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=98.74  E-value=1.4e-08  Score=99.61  Aligned_cols=97  Identities=16%  Similarity=0.277  Sum_probs=78.4

Q ss_pred             ccccccceecccCceeEEEEE-cCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCC-----------CCCcccceeEEEe
Q 013018          346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQ-----------HRNLVRLLGFCLE  413 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-----------h~niv~l~g~~~~  413 (451)
                      ++|...+.||+|+||.||++. ..+++.||||.+... ....+.+.+|+.++.+++           |+||+++++++..
T Consensus        19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~   97 (373)
T 1q8y_A           19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH   97 (373)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred             CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhc
Confidence            468889999999999999999 467899999999743 234467889999998876           8999999999876


Q ss_pred             Cc----eeeEEEeccCCCCHHHHHhccCCCCCCchh
Q 013018          414 GE----EKILVYEFVPNKSLDYFLYAQSPKNNNNWI  445 (451)
Q Consensus       414 ~~----~~~lv~ey~~~GsL~~~L~~~~~~~~l~W~  445 (451)
                      .+    ..++|+||+ +++|.+++...... .+++.
T Consensus        98 ~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~-~~~~~  131 (373)
T 1q8y_A           98 KGPNGVHVVMVFEVL-GENLLALIKKYEHR-GIPLI  131 (373)
T ss_dssp             EETTEEEEEEEECCC-CEEHHHHHHHTTTS-CCCHH
T ss_pred             cCCCCceEEEEEecC-CCCHHHHHHHhhcc-CCcHH
Confidence            44    788999999 89999999874432 24443

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=98.72  E-value=2e-08  Score=98.64  Aligned_cols=89  Identities=9%  Similarity=0.055  Sum_probs=61.0

Q ss_pred             ccccccceecccCceeEEEEE-cCCCcEEEEEEeccCCh---hhHHHHHHHH---HHHhcCCCCCcccce-------eEE
Q 013018          346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSG---QGGQEFKNEV---VLVAKLQHRNLVRLL-------GFC  411 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~---~~~~~~~~E~---~~l~~l~h~niv~l~-------g~~  411 (451)
                      ..|...+.||+|+||.||++. ..+++.||||++.....   ...+.+.+|+   ..|.+ +||||++++       +++
T Consensus        62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~~  140 (371)
T 3q60_A           62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDAV  140 (371)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEEE
T ss_pred             eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehhe
Confidence            447788999999999999999 45789999999986532   2345677885   55555 799977744       343


Q ss_pred             EeC-----------------ceeeEEEeccCCCCHHHHHhcc
Q 013018          412 LEG-----------------EEKILVYEFVPNKSLDYFLYAQ  436 (451)
Q Consensus       412 ~~~-----------------~~~~lv~ey~~~GsL~~~L~~~  436 (451)
                      ...                 ...+|||||++ |+|.++|+..
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~  181 (371)
T 3q60_A          141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTL  181 (371)
T ss_dssp             EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHH
T ss_pred             ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHh
Confidence            322                 34799999999 8999999974

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=98.72  E-value=3.3e-08  Score=100.69  Aligned_cols=99  Identities=24%  Similarity=0.368  Sum_probs=77.6

Q ss_pred             hccccccceecccCceeEEEEE-cCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCC-CCcccceeEEEeCceeeEEEe
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH-RNLVRLLGFCLEGEEKILVYE  422 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~g~~~~~~~~~lv~e  422 (451)
                      .++|...++||+|+||.||++. ..+++.||||++.....  ..++.+|++++..++| +++..+..+....+..+||||
T Consensus         6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme   83 (483)
T 3sv0_A            6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMD   83 (483)
T ss_dssp             TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred             CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEE
Confidence            3568889999999999999999 56789999998865432  2358899999999977 455555566667788899999


Q ss_pred             ccCCCCHHHHHhccCCCCCCchhhhh
Q 013018          423 FVPNKSLDYFLYAQSPKNNNNWIGQD  448 (451)
Q Consensus       423 y~~~GsL~~~L~~~~~~~~l~W~~r~  448 (451)
                      |+ +|+|.+++....  ..++|.+.+
T Consensus        84 ~~-g~sL~~ll~~~~--~~l~~~~~~  106 (483)
T 3sv0_A           84 LL-GPSLEDLFNFCS--RKLSLKTVL  106 (483)
T ss_dssp             CC-CCBHHHHHHHTT--TCCCHHHHH
T ss_pred             CC-CCCHHHHHHhhc--CCCCHHHHH
Confidence            99 999999998533  236665543

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=98.71  E-value=2.8e-08  Score=98.01  Aligned_cols=101  Identities=20%  Similarity=0.221  Sum_probs=79.9

Q ss_pred             hhccccccceecccCceeEEEEE-cCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCC-CC-----CcccceeEEEeCce
Q 013018          344 ATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQ-HR-----NLVRLLGFCLEGEE  416 (451)
Q Consensus       344 ~~~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-h~-----niv~l~g~~~~~~~  416 (451)
                      ..++|...+.||+|+||.||++. ..+++.||||++... .....++.+|+.++..++ |+     +++++.+.+...+.
T Consensus        52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  130 (382)
T 2vx3_A           52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNH  130 (382)
T ss_dssp             ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTE
T ss_pred             eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCc
Confidence            35678889999999999999998 457889999999744 233467788888888774 55     49999999999999


Q ss_pred             eeEEEeccCCCCHHHHHhccCCCCCCchhhh
Q 013018          417 KILVYEFVPNKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       417 ~~lv~ey~~~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                      .+|||||++ |+|.++|..... ..++|...
T Consensus       131 ~~lv~e~~~-~~L~~~l~~~~~-~~~~~~~~  159 (382)
T 2vx3_A          131 LCLVFEMLS-YNLYDLLRNTNF-RGVSLNLT  159 (382)
T ss_dssp             EEEEEECCC-CBHHHHHHHTTT-SCCCHHHH
T ss_pred             eEEEEecCC-CCHHHHHhhcCc-CCCCHHHH
Confidence            999999996 599999987542 23555443

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=98.65  E-value=4.6e-08  Score=94.90  Aligned_cols=99  Identities=18%  Similarity=0.274  Sum_probs=77.7

Q ss_pred             ccccccceecccCceeEEEEEc-CCC-cEEEEEEeccCChhhHHHHHHHHHHHhcCCCCC------cccceeEEEeCcee
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVL-PSG-QEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRN------LVRLLGFCLEGEEK  417 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l-~~g-~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~n------iv~l~g~~~~~~~~  417 (451)
                      ++|...+.||+|+||.||++.. ..+ +.||||.+... ....+.+.+|+.++.+++|+|      ++.+.+++...+..
T Consensus        19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~   97 (355)
T 2eu9_A           19 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHM   97 (355)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEE
T ss_pred             ccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeE
Confidence            5688899999999999999984 334 78999999654 334567889999999887665      88888999889999


Q ss_pred             eEEEeccCCCCHHHHHhccCCCCCCchhhh
Q 013018          418 ILVYEFVPNKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       418 ~lv~ey~~~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                      +|||||+ +|+|.+++..... ..++|.+.
T Consensus        98 ~lv~e~~-~~~l~~~l~~~~~-~~~~~~~~  125 (355)
T 2eu9_A           98 CIAFELL-GKNTFEFLKENNF-QPYPLPHV  125 (355)
T ss_dssp             EEEEECC-CCBHHHHHHHTTT-CCCCHHHH
T ss_pred             EEEEecc-CCChHHHHHhccC-CCCCHHHH
Confidence            9999999 6788888876432 23555443

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=98.59  E-value=7.5e-08  Score=90.95  Aligned_cols=85  Identities=19%  Similarity=0.119  Sum_probs=66.4

Q ss_pred             HhhccccccceecccCceeEEEEEcCCCcEEEEEEeccCCh------------------hhHHHHHHHHHHHhcCCCCCc
Q 013018          343 VATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSG------------------QGGQEFKNEVVLVAKLQHRNL  404 (451)
Q Consensus       343 ~~~~~~~~~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~~------------------~~~~~~~~E~~~l~~l~h~ni  404 (451)
                      .....+...+.||+|+||.||++...+|+.||||.+.....                  .....+.+|+.+|.+++  | 
T Consensus        87 ~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-  163 (282)
T 1zar_A           87 RSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-  163 (282)
T ss_dssp             HTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-
T ss_pred             hCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-
Confidence            33444566799999999999999987799999999964321                  12457899999999999  5 


Q ss_pred             ccceeEEEeCceeeEEEeccCCCCHHH
Q 013018          405 VRLLGFCLEGEEKILVYEFVPNKSLDY  431 (451)
Q Consensus       405 v~l~g~~~~~~~~~lv~ey~~~GsL~~  431 (451)
                      +++.++. ..+..++||||+++|+|.+
T Consensus       164 ~~v~~~~-~~~~~~lvmE~~~g~~L~~  189 (282)
T 1zar_A          164 LAVPKVY-AWEGNAVLMELIDAKELYR  189 (282)
T ss_dssp             SSSCCEE-EEETTEEEEECCCCEEGGG
T ss_pred             CCcCeEE-eccceEEEEEecCCCcHHH
Confidence            6666654 3356799999999999988

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=98.40  E-value=2.8e-07  Score=95.75  Aligned_cols=86  Identities=16%  Similarity=0.108  Sum_probs=63.0

Q ss_pred             eecccCceeEEEEE-cCCCcEEEEEEeccCC----------hhhHHHHHHHHHHHhcC-CCCCcccceeEEEeCceeeEE
Q 013018          353 KLGEGGFGEVYKGV-LPSGQEIAVKRLSRSS----------GQGGQEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKILV  420 (451)
Q Consensus       353 ~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~----------~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lv  420 (451)
                      .++.|+.|.+..+. +--|+.+++|.+....          ....++|.+|+++|+++ +|+||++++++..+....|||
T Consensus       241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV  320 (569)
T 4azs_A          241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV  320 (569)
T ss_dssp             C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred             ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence            34555565555443 3357889999986431          12346799999999999 799999999999999999999


Q ss_pred             EeccCCCCHHHHHhccCC
Q 013018          421 YEFVPNKSLDYFLYAQSP  438 (451)
Q Consensus       421 ~ey~~~GsL~~~L~~~~~  438 (451)
                      |||+++|+|.++|+...+
T Consensus       321 MEyv~G~~L~d~i~~~~~  338 (569)
T 4azs_A          321 MEKLPGRLLSDMLAAGEE  338 (569)
T ss_dssp             EECCCSEEHHHHHHTTCC
T ss_pred             EecCCCCcHHHHHHhCCC
Confidence            999999999999987543

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=98.03  E-value=2.1e-06  Score=85.57  Aligned_cols=104  Identities=13%  Similarity=0.134  Sum_probs=68.2

Q ss_pred             hccccccceecccCceeEEEEE-cCCCcEEEEEEeccCCh---hhHHHHHHHHHHHhcCCC-CCcccce---------eE
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSG---QGGQEFKNEVVLVAKLQH-RNLVRLL---------GF  410 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~h-~niv~l~---------g~  410 (451)
                      ...|...+.||+|+||.||++. ..+|+.||||++.....   ...+.|.+|+.++..++| +|.....         ..
T Consensus        77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~  156 (413)
T 3dzo_A           77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL  156 (413)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEE
T ss_pred             ceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhh
Confidence            3457778899999999999999 66799999999874322   224789999999999987 3221111         11


Q ss_pred             E------------Ee-----CceeeEEEeccCCCCHHHHHhc----cCCCCCCchhhhhc
Q 013018          411 C------------LE-----GEEKILVYEFVPNKSLDYFLYA----QSPKNNNNWIGQDA  449 (451)
Q Consensus       411 ~------------~~-----~~~~~lv~ey~~~GsL~~~L~~----~~~~~~l~W~~r~~  449 (451)
                      .            ..     ....+++++++ .|+|.+++..    ...+..++|..++.
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~  215 (413)
T 3dzo_A          157 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQ  215 (413)
T ss_dssp             EECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHH
T ss_pred             cccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHH
Confidence            1            11     12345666654 7899999852    12233466666553

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=97.99  E-value=5.4e-06  Score=76.98  Aligned_cols=86  Identities=13%  Similarity=0.090  Sum_probs=60.6

Q ss_pred             ccccceecccCceeEEEEEc-CCCcE--EEEEEeccCChh------------------------hHHHHHHHHHHHhcCC
Q 013018          348 FSTDNKLGEGGFGEVYKGVL-PSGQE--IAVKRLSRSSGQ------------------------GGQEFKNEVVLVAKLQ  400 (451)
Q Consensus       348 ~~~~~~lG~G~fg~V~~~~l-~~g~~--vavK~l~~~~~~------------------------~~~~~~~E~~~l~~l~  400 (451)
                      +...+.||+|+||.||++.. .+|+.  ||||.++.....                        ....+.+|+..|.+++
T Consensus        49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~  128 (258)
T 1zth_A           49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK  128 (258)
T ss_dssp             EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence            45678999999999999996 78888  999987543110                        1136889999999998


Q ss_pred             CCCcccceeEEEeCceeeEEEeccCC-C----CHHHHHhc
Q 013018          401 HRNLVRLLGFCLEGEEKILVYEFVPN-K----SLDYFLYA  435 (451)
Q Consensus       401 h~niv~l~g~~~~~~~~~lv~ey~~~-G----sL~~~L~~  435 (451)
                      |+++.....+..  ...+|||||+.. |    +|.+++..
T Consensus       129 ~~~i~~p~~~~~--~~~~lVmE~~g~~g~~~~~L~~~~~~  166 (258)
T 1zth_A          129 EAGVSVPQPYTY--MKNVLLMEFIGEDELPAPTLVELGRE  166 (258)
T ss_dssp             HTTCCCCCEEEE--ETTEEEEECCEETTEECCBHHHHGGG
T ss_pred             hCCCCCCeEEEc--CCCEEEEEecCCCCCccccHHHHhhc
Confidence            886532222221  357899999942 4    77776543

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=97.68  E-value=8.2e-06  Score=79.90  Aligned_cols=84  Identities=11%  Similarity=0.145  Sum_probs=53.3

Q ss_pred             ccccceecccCceeEEEEEcCCCcEEEEEEeccCC--------------hhhHHHHH--------HHHHHHhcCCCCCcc
Q 013018          348 FSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSS--------------GQGGQEFK--------NEVVLVAKLQHRNLV  405 (451)
Q Consensus       348 ~~~~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~--------------~~~~~~~~--------~E~~~l~~l~h~niv  405 (451)
                      +...+.||+|+||.||+|...+|+.||||+++...              ......++        +|...|.++++.++.
T Consensus        97 Y~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~  176 (397)
T 4gyi_A           97 YSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFP  176 (397)
T ss_dssp             SEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred             EEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence            67789999999999999998889999999875321              00112222        345555555433332


Q ss_pred             cceeEEEeCceeeEEEeccCCCCHHHHH
Q 013018          406 RLLGFCLEGEEKILVYEFVPNKSLDYFL  433 (451)
Q Consensus       406 ~l~g~~~~~~~~~lv~ey~~~GsL~~~L  433 (451)
                      ...-+..  ...+|||||++++.|.+++
T Consensus       177 vp~p~~~--~~~~LVME~i~G~~L~~l~  202 (397)
T 4gyi_A          177 VPEPIAQ--SRHTIVMSLVDALPMRQVS  202 (397)
T ss_dssp             CCCEEEE--ETTEEEEECCSCEEGGGCC
T ss_pred             CCeeeec--cCceEEEEecCCccHhhhc
Confidence            2111111  2236999999988876543

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=96.93  E-value=0.0018  Score=59.60  Aligned_cols=88  Identities=11%  Similarity=0.006  Sum_probs=68.8

Q ss_pred             hccccccceecccCceeEEEEEcCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCC-CCCcccceeEEEeCceeeEEEec
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQ-HRNLVRLLGFCLEGEEKILVYEF  423 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~lv~ey  423 (451)
                      .+++.....++.|+.+.||+... .+..+++|............+.+|+.++..+. |.++.+++++....+..++||||
T Consensus        13 l~~~~~~~~~~g~s~~~v~~~~~-~~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~   91 (263)
T 3tm0_A           13 IEKYRCVKDTEGMSPAKVYKLVG-ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSE   91 (263)
T ss_dssp             HTTSEEEECCSCCSSSEEEEEEC-SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEEC
T ss_pred             hccceeEeeccCCCCCeEEEEEC-CCCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEe
Confidence            34566677788888899999986 46889999986532122346889999998884 67788899988888889999999


Q ss_pred             cCCCCHHHHH
Q 013018          424 VPNKSLDYFL  433 (451)
Q Consensus       424 ~~~GsL~~~L  433 (451)
                      +++.+|.+.+
T Consensus        92 i~G~~l~~~~  101 (263)
T 3tm0_A           92 ADGVLCSEEY  101 (263)
T ss_dssp             CSSEEHHHHC
T ss_pred             cCCeehhhcc
Confidence            9999988753

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=96.03  E-value=0.0037  Score=56.99  Aligned_cols=73  Identities=16%  Similarity=0.104  Sum_probs=55.5

Q ss_pred             cccCceeEEEEEcCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCC--cccceeEEEeCceeeEEEeccCCCCHH
Q 013018          355 GEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRN--LVRLLGFCLEGEEKILVYEFVPNKSLD  430 (451)
Q Consensus       355 G~G~fg~V~~~~l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~g~~~~~~~~~lv~ey~~~GsL~  430 (451)
                      +.|..+.||+....+|..+++|.....   ....+.+|+.++..+++.+  +.++++.....+..++||||+++.+|.
T Consensus        29 ~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~  103 (264)
T 1nd4_A           29 IGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL  103 (264)
T ss_dssp             CTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT
T ss_pred             cCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC
Confidence            355668999998877888999987543   2245788888888885444  445788777777789999999998874

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=93.77  E-value=0.13  Score=47.74  Aligned_cols=79  Identities=18%  Similarity=0.273  Sum_probs=56.0

Q ss_pred             cccccceecccCceeEEEEEcCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCC---CcccceeEEEeCceeeEEEec
Q 013018          347 NFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHR---NLVRLLGFCLEGEEKILVYEF  423 (451)
Q Consensus       347 ~~~~~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~g~~~~~~~~~lv~ey  423 (451)
                      .+...+.+|.|..+.||+..+.+|+.+.||+-..........|..|...|+.|...   -+.+.++.    +.-++||||
T Consensus        16 ~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~----~~~~lv~e~   91 (288)
T 3f7w_A           16 EVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW----DDRTLAMEW   91 (288)
T ss_dssp             CEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE----ETTEEEEEC
T ss_pred             CeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEec----cCceEEEEe
Confidence            45567789999999999999999999999987654333335678899888877422   22333332    234789999


Q ss_pred             cCCCCH
Q 013018          424 VPNKSL  429 (451)
Q Consensus       424 ~~~GsL  429 (451)
                      ++.+..
T Consensus        92 l~~~~~   97 (288)
T 3f7w_A           92 VDERPP   97 (288)
T ss_dssp             CCCCCC
T ss_pred             ecccCC
Confidence            886653

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=92.11  E-value=0.12  Score=49.64  Aligned_cols=79  Identities=16%  Similarity=0.320  Sum_probs=55.0

Q ss_pred             ccceecccCceeEEEEEcCCCcEEEEEEec--cCC-hhhHHHHHHHHHHHhcCC--CCCcccceeEEEeC---ceeeEEE
Q 013018          350 TDNKLGEGGFGEVYKGVLPSGQEIAVKRLS--RSS-GQGGQEFKNEVVLVAKLQ--HRNLVRLLGFCLEG---EEKILVY  421 (451)
Q Consensus       350 ~~~~lG~G~fg~V~~~~l~~g~~vavK~l~--~~~-~~~~~~~~~E~~~l~~l~--h~niv~l~g~~~~~---~~~~lv~  421 (451)
                      ..+.|+.|.++.||+....+ ..+++|+..  ... ......+.+|..++..++  +.++.++++.+...   +..++||
T Consensus        42 ~~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vm  120 (359)
T 3dxp_A           42 SVEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIM  120 (359)
T ss_dssp             EEEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEE
T ss_pred             eEEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEE
Confidence            35678999999999998754 577788765  321 122356888999999886  45577888887665   3478999


Q ss_pred             eccCCCCH
Q 013018          422 EFVPNKSL  429 (451)
Q Consensus       422 ey~~~GsL  429 (451)
                      ||+++..+
T Consensus       121 e~v~G~~l  128 (359)
T 3dxp_A          121 EFVSGRVL  128 (359)
T ss_dssp             ECCCCBCC
T ss_pred             EecCCeec
Confidence            99998776

>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}

Probab=90.41  E-value=0.11  Score=33.24  Aligned_cols=11  Identities=18%  Similarity=0.244  Sum_probs=4.1

Q ss_pred             ehhHHHHHHHH
Q 013018          291 VAPIAVTAVLF  301 (451)
Q Consensus       291 vv~~~~~~li~  301 (451)
                      +.+++++++++
T Consensus        18 VgGv~~~~ii~   28 (44)
T 2ks1_B           18 VGALLLLLVVA   28 (44)
T ss_dssp             HHHHHHHHHHH
T ss_pred             hHHHHHHHHHH
Confidence            33343333333

>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}

Probab=89.09  E-value=0.095  Score=33.42  Aligned_cols=8  Identities=0%  Similarity=0.090  Sum_probs=3.0

Q ss_pred             HHHHHHHH
Q 013018          294 IAVTAVLF  301 (451)
Q Consensus       294 ~~~~~li~  301 (451)
                      ++++++++
T Consensus        20 v~~v~ii~   27 (44)
T 2l2t_A           20 LFILVIVG   27 (44)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            33333333

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=88.90  E-value=1.1  Score=42.04  Aligned_cols=78  Identities=22%  Similarity=0.160  Sum_probs=59.4

Q ss_pred             ccccceecccCceeEEEEEcCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCC---CCCcccceeEEEeCceeeEEEecc
Q 013018          348 FSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQ---HRNLVRLLGFCLEGEEKILVYEFV  424 (451)
Q Consensus       348 ~~~~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~g~~~~~~~~~lv~ey~  424 (451)
                      +...+.|+.|....+|+... ++..+.+|.....   ....+..|...|..|.   ...+.+.++.....+..++||||+
T Consensus        38 i~~~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l  113 (312)
T 3jr1_A           38 IKHKEKLYSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEAL  113 (312)
T ss_dssp             CCEEEEECCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECC
T ss_pred             eeeeEEeCCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEec
Confidence            34456789999999999887 5667888876533   3467888988888773   355777888877777899999999


Q ss_pred             CCCCH
Q 013018          425 PNKSL  429 (451)
Q Consensus       425 ~~GsL  429 (451)
                      ++..+
T Consensus       114 ~G~~~  118 (312)
T 3jr1_A          114 NKSKN  118 (312)
T ss_dssp             CCCCC
T ss_pred             cCCCC
Confidence            98764

>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A

Probab=88.38  E-value=0.068  Score=53.57  Aligned_cols=61  Identities=8%  Similarity=0.076  Sum_probs=18.2

Q ss_pred             ccceecccCceeEEEEEcCC-CcEEEE------EEeccC--ChhhHHHHHHHHHHHhcCCCCCcccceeEEEe
Q 013018          350 TDNKLGEGGFGEVYKGVLPS-GQEIAV------KRLSRS--SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLE  413 (451)
Q Consensus       350 ~~~~lG~G~fg~V~~~~l~~-g~~vav------K~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~  413 (451)
                      ..+.||   ||.||+|.+.. ..+|||      |.....  +.+...+|.+|..++.+++|||+++..++...
T Consensus       146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~  215 (463)
T 3cxl_A          146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH  215 (463)
T ss_dssp             STTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEEE
T ss_pred             ccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEe
Confidence            345666   99999999854 367888      766543  22334679999999999999999999887653

>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A

Probab=87.20  E-value=0.091  Score=33.44  Aligned_cols=9  Identities=44%  Similarity=0.482  Sum_probs=4.1

Q ss_pred             eEeeehhHH
Q 013018          287 IIAIVAPIA  295 (451)
Q Consensus       287 ii~ivv~~~  295 (451)
                      +.+.+++++
T Consensus        14 Ia~~vVGvl   22 (44)
T 2jwa_A           14 IISAVVGIL   22 (44)
T ss_dssp             HHHHHHHHH
T ss_pred             hHHHHHHHH
Confidence            444455533

>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A

Probab=85.53  E-value=0.19  Score=31.06  Aligned_cols=30  Identities=23%  Similarity=0.423  Sum_probs=14.7

Q ss_pred             CccCceeEeeehhHHHHHHHHHhhhhhhee
Q 013018          281 GISSSTIIAIVAPIAVTAVLFIVGLCYFIR  310 (451)
Q Consensus       281 ~~s~~~ii~ivv~~~~~~li~i~~~~~~~r  310 (451)
                      ..+...|.+++++.++.+++++...++++|
T Consensus         7 ~ls~GaIAGiVvG~v~gv~li~~l~~~~~r   36 (38)
T 2k1k_A            7 GLTGGEIVAVIFGLLLGAALLLGILVFRSR   36 (38)
T ss_dssp             TCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             CCCCCceeeeehHHHHHHHHHHHHHHHHee
Confidence            334555666666655544444333333333

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=85.43  E-value=0.93  Score=43.95  Aligned_cols=75  Identities=15%  Similarity=0.154  Sum_probs=48.3

Q ss_pred             cceecccCceeEEEEEcC-CCcEEEEEEeccCCh-------hhHHHHHHHHHHHhcCCC--CCcc-cceeEEEeCceeeE
Q 013018          351 DNKLGEGGFGEVYKGVLP-SGQEIAVKRLSRSSG-------QGGQEFKNEVVLVAKLQH--RNLV-RLLGFCLEGEEKIL  419 (451)
Q Consensus       351 ~~~lG~G~fg~V~~~~l~-~g~~vavK~l~~~~~-------~~~~~~~~E~~~l~~l~h--~niv-~l~g~~~~~~~~~l  419 (451)
                      .+.||.|..+.||++... +++.++||.......       ...+.+..|.+++..+.+  +..+ +++.+  ..+..++
T Consensus        35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l  112 (397)
T 2olc_A           35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT  112 (397)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred             EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence            467899999999999753 467899997653211       122456778888877632  3333 44433  3455689


Q ss_pred             EEeccCCC
Q 013018          420 VYEFVPNK  427 (451)
Q Consensus       420 v~ey~~~G  427 (451)
                      ||||+++.
T Consensus       113 vmE~l~g~  120 (397)
T 2olc_A          113 VMEDLSHL  120 (397)
T ss_dssp             EECCCTTS
T ss_pred             EEEeCCCc
Confidence            99999764

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=85.00  E-value=2.7  Score=37.95  Aligned_cols=78  Identities=19%  Similarity=0.201  Sum_probs=55.0

Q ss_pred             eecccCce-eEEEEEcC-CCcEEEEEEeccCChhhHHHHHHHHHHHhcCC-CCCcccceeEEEeCceeeEEEeccCCCCH
Q 013018          353 KLGEGGFG-EVYKGVLP-SGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQ-HRNLVRLLGFCLEGEEKILVYEFVPNKSL  429 (451)
Q Consensus       353 ~lG~G~fg-~V~~~~l~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~lv~ey~~~GsL  429 (451)
                      .+..|.-| .||+-... ++..+.+|+-...   ...++.+|...|..+. +-.+-++++++...+..++|||++++.++
T Consensus        31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~  107 (272)
T 4gkh_A           31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTA  107 (272)
T ss_dssp             EEECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEH
T ss_pred             EccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccc
Confidence            34445555 58887743 4567888876432   3457888998888774 33356778888888889999999998877


Q ss_pred             HHHH
Q 013018          430 DYFL  433 (451)
Q Consensus       430 ~~~L  433 (451)
                      .+..
T Consensus       108 ~~~~  111 (272)
T 4gkh_A          108 FQVL  111 (272)
T ss_dssp             HHHH
T ss_pred             cccc
Confidence            6543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	451
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	2e-26
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	2e-26
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	4e-26
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	2e-25
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	2e-25
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	8e-25
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	1e-24
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	2e-24
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	2e-24
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	6e-24
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	7e-24
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	5e-23
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	6e-23
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	8e-23
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	1e-22
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	2e-22
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	2e-22
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	4e-22
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	4e-22
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	8e-22
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	2e-21
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	3e-21
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	4e-21
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	2e-20
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	3e-20
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	3e-20
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	5e-20
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	6e-20
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	7e-20
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	1e-19
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	2e-19
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	2e-19
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	3e-19
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	3e-19
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	7e-19
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	2e-18
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	2e-18
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	3e-18
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	9e-18
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	2e-17
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	2e-17
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	3e-17
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	3e-17
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	1e-16
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	1e-16
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	1e-16
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	2e-16
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	1e-15
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	2e-15
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	3e-15
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	5e-15
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	6e-15
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	8e-15
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	2e-14
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	4e-14
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	5e-14
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	6e-14
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	1e-13
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	2e-13
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	2e-13
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	4e-13
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	3e-12
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	4e-11

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  105 bits (263), Expect = 2e-26
 Identities = 24/102 (23%), Positives = 43/102 (42%), Gaps = 1/102 (0%)

Query: 346 NNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLV 405
            + +   +LG G FG V  G      ++A+K +   S     EF  E  ++  L H  LV
Sbjct: 4   KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLV 62

Query: 406 RLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPKNNNNWIGQ 447
           +L G C +     ++ E++ N  L  +L     +     + +
Sbjct: 63  QLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLE 104

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  105 bits (263), Expect = 2e-26
 Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 1/100 (1%)

Query: 346 NNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLV 405
           +  +   ++G G FG V+ G   +  ++A+K +   +    ++F  E  ++ KL H  LV
Sbjct: 5   SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLV 63

Query: 406 RLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPKNNNNWI 445
           +L G CLE     LV+EF+ +  L  +L  Q        +
Sbjct: 64  QLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL 103

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  104 bits (261), Expect = 4e-26
 Identities = 33/103 (32%), Positives = 46/103 (44%), Gaps = 2/103 (1%)

Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
           EV         +LG G FGEV+ G      ++AVK L + S      F  E  L+ +LQH
Sbjct: 9   EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQH 67

Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPKNNNNW 444
           + LVRL     + E   ++ E++ N SL  FL   S       
Sbjct: 68  QRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTIN 109

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  103 bits (258), Expect = 2e-25
 Identities = 22/100 (22%), Positives = 39/100 (39%), Gaps = 2/100 (2%)

Query: 341 IEVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGG-QEFKNEVVLVAK 398
           +E+  ++F   ++LG G  G V+K    PSG  +A K +          +   E+ ++ +
Sbjct: 1   MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60

Query: 399 LQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSP 438
                +V   G      E  +  E +   SLD  L     
Sbjct: 61  CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR 100

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  102 bits (256), Expect = 2e-25
 Identities = 30/110 (27%), Positives = 58/110 (52%), Gaps = 2/110 (1%)

Query: 331 LESLQFDFETIEVATNNFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSRSSGQGGQEF 389
           ++    +++  E+   + +  +KLG G +GEVY+GV       +AVK L   + +  +EF
Sbjct: 2   MDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEF 60

Query: 390 KNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPK 439
             E  ++ +++H NLV+LLG C       ++ EF+   +L  +L   + +
Sbjct: 61  LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ 110

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  100 bits (251), Expect = 8e-25
 Identities = 27/99 (27%), Positives = 49/99 (49%), Gaps = 4/99 (4%)

Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
            +          +G+G FG+V  G    G ++AVK +   +    Q F  E  ++ +L+H
Sbjct: 3   ALNMKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDATA--QAFLAEASVMTQLRH 59

Query: 402 RNLVRLLGFCLEGEEKI-LVYEFVPNKSLDYFLYAQSPK 439
            NLV+LLG  +E +  + +V E++   SL  +L ++   
Sbjct: 60  SNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRS 98

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  101 bits (252), Expect = 1e-24
 Identities = 35/122 (28%), Positives = 57/122 (46%), Gaps = 7/122 (5%)

Query: 334 LQFDFETIEVATNNFSTDNKLGEGGFGEVYKGVLP------SGQEIAVKRLSRSSGQGGQ 387
           L     ++E   NN      +GEG FG V++   P          +AVK L   +    Q
Sbjct: 1   LNPKLLSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQ 60

Query: 388 -EFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPKNNNNWIG 446
            +F+ E  L+A+  + N+V+LLG C  G+   L++E++    L+ FL + SP    +   
Sbjct: 61  ADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSH 120

Query: 447 QD 448
            D
Sbjct: 121 SD 122

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  100 bits (249), Expect = 2e-24
 Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 6/104 (5%)

Query: 341 IEVATNNFS-TDNKLGEGGFGEVYKGVL---PSGQEIAVKRLSRSSGQGG-QEFKNEVVL 395
           + +  +N    D +LG G FG V +GV        ++A+K L + + +   +E   E  +
Sbjct: 3   LFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQI 62

Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPK 439
           + +L +  +VRL+G C + E  +LV E      L  FL  +  +
Sbjct: 63  MHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREE 105

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  100 bits (249), Expect = 2e-24
 Identities = 25/98 (25%), Positives = 47/98 (47%), Gaps = 1/98 (1%)

Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
           E+     +   ++G G FG VYKG       + +  ++  + Q  Q FKNEV ++ K +H
Sbjct: 4   EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 63

Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPK 439
            N++  +G+     +  +V ++    SL + L+    K
Sbjct: 64  VNILLFMGYS-TAPQLAIVTQWCEGSSLYHHLHIIETK 100

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 99.3 bits (247), Expect = 6e-24
 Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 4/95 (4%)

Query: 348 FSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGG---QEFKNEVVLVAKLQHRN 403
           FS   ++G G FG VY    + + + +A+K++S S  Q     Q+   EV  + KL+H N
Sbjct: 17  FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76

Query: 404 LVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSP 438
            ++  G  L      LV E+    + D     + P
Sbjct: 77  TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKP 111

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 99.1 bits (246), Expect = 7e-24
 Identities = 30/124 (24%), Positives = 52/124 (41%), Gaps = 9/124 (7%)

Query: 326 NDITTLESLQFDFETI-EVATNNFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRL 378
           N+   ++  Q  ++   E   N  S    LG G FG+V +          +   +AVK L
Sbjct: 2   NNYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKML 61

Query: 379 SRSSGQGG-QEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQ 436
             S+     +   +E+ +++ L  H N+V LLG C  G   +++ E+     L  FL  +
Sbjct: 62  KPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRK 121

Query: 437 SPKN 440
               
Sbjct: 122 RDSF 125

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 96.7 bits (240), Expect = 5e-23
 Identities = 30/124 (24%), Positives = 53/124 (42%), Gaps = 14/124 (11%)

Query: 336 FDFETIEVATNNFST---------DNKLGEGGFGEVYKGVLPSGQE----IAVKRLSRS- 381
           F FE    A   F+          +  +G G FGEV  G L    +    +A+K L    
Sbjct: 7   FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 66

Query: 382 SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPKNN 441
           + +  ++F +E  ++ +  H N++ L G   +    +++ EF+ N SLD FL     +  
Sbjct: 67  TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFT 126

Query: 442 NNWI 445
              +
Sbjct: 127 VIQL 130

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 95.9 bits (238), Expect = 6e-23
 Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 2/101 (1%)

Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
           E+   +   + KLG+G FGEV+ G       +A+K L   +    + F  E  ++ KL+H
Sbjct: 13  EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRH 71

Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPKNNN 442
             LV+L       E   +V E++   SL  FL  ++ K   
Sbjct: 72  EKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFLKGETGKYLR 111

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 96.4 bits (239), Expect = 8e-23
 Identities = 30/132 (22%), Positives = 59/132 (44%), Gaps = 9/132 (6%)

Query: 323 NADNDITTLESLQFDFETI-EVATNNFSTDNKLGEGGFGEVYKGVLPS------GQEIAV 375
           ++DN+   ++  +++++   E    N      LG G FG+V               ++AV
Sbjct: 13  SSDNEYFYVDFREYEYDLKWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAV 72

Query: 376 KRLSRSSGQGGQE-FKNEVVLVAKL-QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL 433
           K L   +    +E   +E+ ++ +L  H N+V LLG C       L++E+     L  +L
Sbjct: 73  KMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYL 132

Query: 434 YAQSPKNNNNWI 445
            ++  K + + I
Sbjct: 133 RSKREKFSEDEI 144

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 94.8 bits (235), Expect = 1e-22
 Identities = 27/93 (29%), Positives = 41/93 (44%), Gaps = 6/93 (6%)

Query: 351 DNKLGEGGFGEVYKGVLP---SGQEIAVKRLSRSSGQGG--QEFKNEVVLVAKLQHRNLV 405
           D +LG G FG V KG        + +AVK L   +       E   E  ++ +L +  +V
Sbjct: 12  DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 71

Query: 406 RLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSP 438
           R++G C E E  +LV E      L+ +L     
Sbjct: 72  RMIGIC-EAESWMLVMEMAELGPLNKYLQQNRH 103

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 95.2 bits (236), Expect = 2e-22
 Identities = 29/121 (23%), Positives = 52/121 (42%), Gaps = 8/121 (6%)

Query: 331 LESLQFDFETIEVATNNFSTDNKLGEGGFGEVYKGVLP----SGQEIAVKRLSRSSGQGG 386
           ++++Q           +F  +  +G G FG VY G L          AVK L+R +  G 
Sbjct: 14  VQAVQHVVIGPSSLIVHF--NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE 71

Query: 387 -QEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKI-LVYEFVPNKSLDYFLYAQSPKNNNNW 444
             +F  E +++    H N++ LLG CL  E    +V  ++ +  L  F+  ++       
Sbjct: 72  VSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD 131

Query: 445 I 445
           +
Sbjct: 132 L 132

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 94.9 bits (235), Expect = 2e-22
 Identities = 30/109 (27%), Positives = 53/109 (48%), Gaps = 7/109 (6%)

Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRLSRSSGQGG-QEFKNEVV 394
           EVA    +   +LG+G FG VY+GV            +A+K ++ ++      EF NE  
Sbjct: 16  EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 75

Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPKNNNN 443
           ++ +    ++VRLLG   +G+  +++ E +    L  +L +  P   NN
Sbjct: 76  VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANN 124

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 93.9 bits (233), Expect = 4e-22
 Identities = 26/110 (23%), Positives = 57/110 (51%), Gaps = 2/110 (1%)

Query: 326 NDITTLESLQFDFETIEVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQ 384
           +D   LE L+    ++      ++   K+G+G  G VY  + + +GQE+A+++++     
Sbjct: 1   SDEEILEKLR-SIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP 59

Query: 385 GGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLY 434
             +   NE++++ + ++ N+V  L   L G+E  +V E++   SL   + 
Sbjct: 60  KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVT 109

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 93.3 bits (231), Expect = 4e-22
 Identities = 33/113 (29%), Positives = 45/113 (39%), Gaps = 8/113 (7%)

Query: 340 TIEVATNNFSTDNKLGEGGFGEVYKGVLPS----GQEIAVKRLSR---SSGQGGQEFKNE 392
           T  +   +     KLG+G FG V +G   +       +AVK L     S  +   +F  E
Sbjct: 2   TCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIRE 61

Query: 393 VVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPKNNNNWI 445
           V  +  L HRNL+RL G  L    K+ V E  P  SL   L           +
Sbjct: 62  VNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTL 113

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 94.0 bits (233), Expect = 8e-22
 Identities = 21/95 (22%), Positives = 42/95 (44%), Gaps = 1/95 (1%)

Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNL 404
           +++    +LG G FG V++     +G   A K +        +  + E+  ++ L+H  L
Sbjct: 26  DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 85

Query: 405 VRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPK 439
           V L     +  E +++YEF+    L   +  +  K
Sbjct: 86  VNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNK 120

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 92.0 bits (228), Expect = 2e-21
 Identities = 21/103 (20%), Positives = 47/103 (45%), Gaps = 2/103 (1%)

Query: 338 FETIEVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQE-FKNEVVL 395
           ++  E   + +   + LG G F EV       + + +A+K +++ + +G +   +NE+ +
Sbjct: 1   WKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAV 60

Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSP 438
           + K++H N+V L      G    L+ + V    L   +  +  
Sbjct: 61  LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGF 103

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 91.2 bits (226), Expect = 3e-21
 Identities = 23/101 (22%), Positives = 45/101 (44%), Gaps = 4/101 (3%)

Query: 338 FETIEVATN---NFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEV 393
           +E +    N    +    +LG+G FG+VYK     +    A K +   S +  +++  E+
Sbjct: 1   YEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEI 60

Query: 394 VLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLY 434
            ++A   H N+V+LL          ++ EF    ++D  + 
Sbjct: 61  DILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVML 101

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 92.0 bits (228), Expect = 4e-21
 Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 1/88 (1%)

Query: 353 KLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFC 411
           +LG G FG V++ V   +G+    K ++          KNE+ ++ +L H  L+ L    
Sbjct: 36  ELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAF 95

Query: 412 LEGEEKILVYEFVPNKSLDYFLYAQSPK 439
            +  E +L+ EF+    L   + A+  K
Sbjct: 96  EDKYEMVLILEFLSGGELFDRIAAEDYK 123

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.1 bits (220), Expect = 2e-20
 Identities = 28/102 (27%), Positives = 48/102 (47%), Gaps = 5/102 (4%)

Query: 346 NNFSTDNKLGEGGFGEVYKGVLPSG---QEIAVKRLSR-SSGQGGQEFKNEVVLVAKL-Q 400
           N+    + +GEG FG+V K  +       + A+KR+   +S    ++F  E+ ++ KL  
Sbjct: 10  NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 69

Query: 401 HRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPKNNN 442
           H N++ LLG C       L  E+ P+ +L  FL        +
Sbjct: 70  HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETD 111

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.4 bits (218), Expect = 3e-20
 Identities = 27/99 (27%), Positives = 51/99 (51%), Gaps = 6/99 (6%)

Query: 340 TIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQE-----IAVKRLSRSSGQGGQ-EFKNEV 393
           T E+  +  +    +G G FGEVYKG+L +        +A+K L     +  + +F  E 
Sbjct: 1   TTEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEA 60

Query: 394 VLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYF 432
            ++ +  H N++RL G   + +  +++ E++ N +LD F
Sbjct: 61  GIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKF 99

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.8 bits (217), Expect = 3e-20
 Identities = 24/95 (25%), Positives = 38/95 (40%), Gaps = 2/95 (2%)

Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQE-FKNEVVLVAKLQHRN 403
            ++     LGEG +GEV   V   + + +AVK +         E  K E+ +   L H N
Sbjct: 5   EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 64

Query: 404 LVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSP 438
           +V+  G   EG  + L  E+     L   +     
Sbjct: 65  VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG 99

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.8 bits (217), Expect = 5e-20
 Identities = 20/96 (20%), Positives = 35/96 (36%), Gaps = 4/96 (4%)

Query: 347 NFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRS---SGQGGQEFKNEVVLVAKLQHR 402
           +F     LGEG F  V     L + +E A+K L +              E  ++++L H 
Sbjct: 9   DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 68

Query: 403 NLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSP 438
             V+L     + E+      +  N  L  ++     
Sbjct: 69  FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS 104

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 88.6 bits (219), Expect = 6e-20
 Identities = 25/100 (25%), Positives = 40/100 (40%), Gaps = 7/100 (7%)

Query: 346 NNFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSRS---SGQGGQEFKNEVV---LVAK 398
           N+FS    +G GGFGEVY      +G+  A+K L +      QG     NE +   LV+ 
Sbjct: 4   NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 63

Query: 399 LQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSP 438
                +V +       ++   + + +    L Y L     
Sbjct: 64  GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV 103

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.6 bits (216), Expect = 7e-20
 Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 6/85 (7%)

Query: 353 KLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCL 412
            +G+G FGEV++G    G+E+AVK  S    +     + E+     L+H N++  +    
Sbjct: 10  SIGKGRFGEVWRGKW-RGEEVAVKIFSSREERS-WFREAEIYQTVMLRHENILGFIAADN 67

Query: 413 EGEEKI----LVYEFVPNKSLDYFL 433
           +         LV ++  + SL  +L
Sbjct: 68  KDNGTWTQLWLVSDYHEHGSLFDYL 92

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.0 bits (212), Expect = 1e-19
 Identities = 23/103 (22%), Positives = 43/103 (41%), Gaps = 6/103 (5%)

Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPS----GQEIAVKRLSRSSGQGGQE-FKNEVVLV 396
           E+          +GEG FG+V++G+  S       +A+K     +    +E F  E + +
Sbjct: 3   EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 62

Query: 397 AKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPK 439
            +  H ++V+L+G   E     ++ E      L  FL  +   
Sbjct: 63  RQFDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKYS 104

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.8 bits (212), Expect = 2e-19
 Identities = 20/99 (20%), Positives = 38/99 (38%), Gaps = 5/99 (5%)

Query: 347 NFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGG--QEFKNEVVLVAKLQHRN 403
           ++     +G G +G   K      G+ +  K L   S      Q   +EV L+ +L+H N
Sbjct: 5   DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPN 64

Query: 404 LVRLLGFCLEGEEKI--LVYEFVPNKSLDYFLYAQSPKN 440
           +VR     ++       +V E+     L   +   + + 
Sbjct: 65  IVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKER 103

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.0 bits (210), Expect = 2e-19
 Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 4/97 (4%)

Query: 346 NNFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSRSSGQGGQ---EFKNEVVLVAKLQH 401
            +F     LG+G FG VY      S   +A+K L ++  +      + + EV + + L+H
Sbjct: 6   EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 65

Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSP 438
            N++RL G+  +     L+ E+ P  ++   L   S 
Sbjct: 66  PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK 102

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.0 bits (210), Expect = 3e-19
 Identities = 26/95 (27%), Positives = 41/95 (43%), Gaps = 7/95 (7%)

Query: 351 DNKLGEGGFGEVYKGVLP-SGQEIAVKRLSRS--SGQGGQEFKNEVVLVAKLQHRNLVRL 407
           D ++G G F  VYKG+   +  E+A   L     +    Q FK E  ++  LQH N+VR 
Sbjct: 14  DIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRF 73

Query: 408 LGFCLEGEEK----ILVYEFVPNKSLDYFLYAQSP 438
                   +     +LV E + + +L  +L     
Sbjct: 74  YDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKV 108

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 85.3 bits (210), Expect = 3e-19
 Identities = 22/95 (23%), Positives = 40/95 (42%), Gaps = 2/95 (2%)

Query: 346 NNFSTDNKLGEGGFGEVYKGVLPSGQEIAVK--RLSRSSGQGGQEFKNEVVLVAKLQHRN 403
             +    K+GEG +G VYK     G+  A+K  RL +           E+ ++ +L+H N
Sbjct: 2   EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61

Query: 404 LVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSP 438
           +V+L       +  +LV+E +           +  
Sbjct: 62  IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGG 96

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 84.0 bits (207), Expect = 7e-19
 Identities = 23/102 (22%), Positives = 40/102 (39%), Gaps = 8/102 (7%)

Query: 345 TNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGG---QEFKNEVVLVAKLQ 400
           ++ +     LG GG  EV+    L   +++AVK L     +       F+ E    A L 
Sbjct: 6   SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 65

Query: 401 HRNLVRLLGFCLE----GEEKILVYEFVPNKSLDYFLYAQSP 438
           H  +V +          G    +V E+V   +L   ++ + P
Sbjct: 66  HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP 107

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.1 bits (207), Expect = 2e-18
 Identities = 15/92 (16%), Positives = 38/92 (41%), Gaps = 2/92 (2%)

Query: 345 TNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGG-QEFKNEVVLVAKLQHR 402
              ++  + +GEG +G V       +   +A+K++S    Q   Q    E+ ++ + +H 
Sbjct: 7   GPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHE 66

Query: 403 NLVRLLGFCLEGEEKILVYEFVPNKSLDYFLY 434
           N++ +         + +   ++    +   LY
Sbjct: 67  NIIGINDIIRAPTIEQMKDVYLVTHLMGADLY 98

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.0 bits (204), Expect = 2e-18
 Identities = 24/109 (22%), Positives = 48/109 (44%), Gaps = 10/109 (9%)

Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPS--------GQEIAVKRLSRSSGQGG-QEFKNE 392
           E+  +       LGEG FG+V                 ++AVK L   + +    +  +E
Sbjct: 9   ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 68

Query: 393 VVLVAKL-QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPKN 440
           + ++  + +H+N++ LLG C +     ++ E+    +L  +L A+ P  
Sbjct: 69  MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPG 117

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.2 bits (205), Expect = 3e-18
 Identities = 20/88 (22%), Positives = 40/88 (45%), Gaps = 2/88 (2%)

Query: 353 KLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFC 411
            LG G FG V++ V   S +    K + +  G      K E+ ++   +HRN++ L    
Sbjct: 12  DLGRGEFGIVHRCVETSSKKTYMAKFV-KVKGTDQVLVKKEISILNIARHRNILHLHESF 70

Query: 412 LEGEEKILVYEFVPNKSLDYFLYAQSPK 439
              EE ++++EF+    +   +   + +
Sbjct: 71  ESMEELVMIFEFISGLDIFERINTSAFE 98

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.1 bits (202), Expect = 9e-18
 Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 11/106 (10%)

Query: 347 NFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLV 405
           +++    +G G FG VY+  L  SG+ +A+K++ +      +    E+ ++ KL H N+V
Sbjct: 21  SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIV 76

Query: 406 RLLGFCLEGEEK------ILVYEFVPNKSLDYFLYAQSPKNNNNWI 445
           RL  F     EK       LV ++VP        +    K     I
Sbjct: 77  RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 122

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 80.5 bits (198), Expect = 2e-17
 Identities = 18/103 (17%), Positives = 43/103 (41%), Gaps = 4/103 (3%)

Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRS---SGQGGQEFKNEVVLVAKLQH 401
            +F     LG G FG V+      +G+  A+K L +      +  +   +E ++++ + H
Sbjct: 4   QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTH 63

Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPKNNNNW 444
             ++R+ G   + ++  ++ +++    L   L       N   
Sbjct: 64  PFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVA 106

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.2 bits (197), Expect = 2e-17
 Identities = 28/104 (26%), Positives = 53/104 (50%), Gaps = 7/104 (6%)

Query: 348 FSTDNKLGEGGFGEVYKGV-LPSGQE----IAVKRLSRS-SGQGGQEFKNEVVLVAKLQH 401
           F     LG G FG VYKG+ +P G++    +A+K L  + S +  +E  +E  ++A + +
Sbjct: 11  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 70

Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPKNNNNWI 445
            ++ RLLG CL    + L+ + +P   L  ++        + ++
Sbjct: 71  PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL 113

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.8 bits (196), Expect = 3e-17
 Identities = 24/100 (24%), Positives = 43/100 (43%), Gaps = 7/100 (7%)

Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSS------GQGGQEFKNEVVLVAK 398
           + + T  +LG G F  V K     +G + A K + +        G   ++ + EV ++ +
Sbjct: 10  DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 69

Query: 399 LQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSP 438
           +QH N++ L        + IL+ E V    L  FL  +  
Sbjct: 70  IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES 109

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.9 bits (196), Expect = 3e-17
 Identities = 28/102 (27%), Positives = 45/102 (44%), Gaps = 3/102 (2%)

Query: 347 NFSTDNKLGEGGFGEVYKGV-LPSGQEIAVK--RLSRSSGQGGQEFKNEVVLVAKLQHRN 403
           NF    K+GEG +G VYK     +G+ +A+K  RL   +         E+ L+ +L H N
Sbjct: 3   NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62

Query: 404 LVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPKNNNNWI 445
           +V+LL       +  LV+EF+      +   +         I
Sbjct: 63  IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLI 104

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.0 bits (191), Expect = 1e-16
 Identities = 21/87 (24%), Positives = 37/87 (42%), Gaps = 6/87 (6%)

Query: 352 NKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQE-----FKNEVVLVAKLQHRNLV 405
           + LGEG F  VYK     + Q +A+K++        ++        E+ L+ +L H N++
Sbjct: 4   DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNII 63

Query: 406 RLLGFCLEGEEKILVYEFVPNKSLDYF 432
            LL          LV++F+        
Sbjct: 64  GLLDAFGHKSNISLVFDFMETDLEVII 90

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 78.0 bits (191), Expect = 1e-16
 Identities = 21/95 (22%), Positives = 42/95 (44%), Gaps = 4/95 (4%)

Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNL 404
           N +    K+G G FG++Y G  + +G+E+A+K     +     +   E  +   +Q    
Sbjct: 7   NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH--PQLHIESKIYKMMQGGVG 64

Query: 405 VRLLGFCL-EGEEKILVYEFVPNKSLDYFLYAQSP 438
           +  + +C  EG+  ++V E +     D F +    
Sbjct: 65  IPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRK 99

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.2 bits (192), Expect = 1e-16
 Identities = 20/98 (20%), Positives = 36/98 (36%), Gaps = 5/98 (5%)

Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKN----EVVLVAKLQ 400
            +F     LG+G FG+V+      + Q  A+K L +       + +     + VL    +
Sbjct: 2   EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWE 61

Query: 401 HRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSP 438
           H  L  +       E    V E++    L Y + +   
Sbjct: 62  HPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHK 99

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.6 bits (190), Expect = 2e-16
 Identities = 25/127 (19%), Positives = 47/127 (37%), Gaps = 9/127 (7%)

Query: 334 LQFDFETIEVATNNFSTDNKLGEGGFGEVYKGV------LPSGQEIAVKRLSRSSGQGGQ 387
           L +D    E   +       LG G FG+V +          + + +AVK L   +     
Sbjct: 1   LPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH 60

Query: 388 E--FKNEVVLVAKLQHRNLVRLLGFCLEGEEKI-LVYEFVPNKSLDYFLYAQSPKNNNNW 444
                   +L+    H N+V LLG C +    + ++ EF    +L  +L ++  +     
Sbjct: 61  RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 120

Query: 445 IGQDATR 451
           +  +   
Sbjct: 121 VAPEDLY 127

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.4 bits (184), Expect = 1e-15
 Identities = 25/126 (19%), Positives = 49/126 (38%), Gaps = 15/126 (11%)

Query: 337 DFETIEVATNNFSTDNK------LGEGGFGEVYKGV-LPSGQEIAVKRLSRS--SGQGGQ 387
            F ++EV  + F+   +      +G G  G V         + +A+K+LSR   +    +
Sbjct: 2   QFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAK 61

Query: 388 EFKNEVVLVAKLQHRNLVRLLGFCL------EGEEKILVYEFVPNKSLDYFLYAQSPKNN 441
               E+VL+  + H+N++ LL          E ++  LV E +              +  
Sbjct: 62  RAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERM 121

Query: 442 NNWIGQ 447
           +  + Q
Sbjct: 122 SYLLYQ 127

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 74.3 bits (182), Expect = 2e-15
 Identities = 21/103 (20%), Positives = 40/103 (38%), Gaps = 11/103 (10%)

Query: 347 NFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGG---------QEFKNEVVLV 396
           N+     LG G    V + +  P+ +E AVK +  + G            +    EV ++
Sbjct: 4   NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL 63

Query: 397 AKLQ-HRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSP 438
            K+  H N+++L           LV++ +    L  +L  +  
Sbjct: 64  RKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT 106

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.2 bits (179), Expect = 3e-15
 Identities = 22/100 (22%), Positives = 40/100 (40%), Gaps = 9/100 (9%)

Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQE------FKNEVVLVAK 398
           + +     LG GGFG VY G+ +     +A+K + +       E         EVVL+ K
Sbjct: 4   SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 63

Query: 399 LQ--HRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQ 436
           +      ++RLL +    +  +L+ E        +    +
Sbjct: 64  VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE 103

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 73.3 bits (179), Expect = 5e-15
 Identities = 23/119 (19%), Positives = 52/119 (43%), Gaps = 10/119 (8%)

Query: 336 FDFETIEVATNN---FSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKN 391
           +D+E+  V   N   +    KLG G + EV++ + + + +++ VK L        ++ K 
Sbjct: 22  WDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKR 78

Query: 392 EVVLVAKLQ-HRNLVRLLGFCLEGEEK--ILVYEFVPNKSLDYFLYAQSPKNNNNWIGQ 447
           E+ ++  L+   N++ L     +   +   LV+E V N          +  +   ++ +
Sbjct: 79  EIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYE 137

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.7 bits (180), Expect = 6e-15
 Identities = 21/95 (22%), Positives = 38/95 (40%), Gaps = 9/95 (9%)

Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRS--SGQGGQEFKNEVVLVAKLQHR 402
             +     +G G +G V   V   +G ++A+K+L R   S    +    E+ L+  ++H 
Sbjct: 18  AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHE 77

Query: 403 NLVRLLGFCLEGE------EKILVYEFVPNKSLDY 431
           N++ LL      E      +  LV  F+       
Sbjct: 78  NVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKL 112

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.6 bits (177), Expect = 8e-15
 Identities = 23/110 (20%), Positives = 46/110 (41%), Gaps = 11/110 (10%)

Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGG--QEFKNEVVLVAKLQHR 402
           + +    K+G+G FGEV+K     +GQ++A+K++   + + G       E+ ++  L+H 
Sbjct: 10  SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHE 69

Query: 403 NLVRLLGFCLEGEEKI--------LVYEFVPNKSLDYFLYAQSPKNNNNW 444
           N+V L+  C               LV++F  +               +  
Sbjct: 70  NVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEI 119

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.5 bits (174), Expect = 2e-14
 Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 3/90 (3%)

Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGG--QEFKNEVVLVAKLQHR 402
             +    K+GEG +G V+K     + + +A+KR+       G       E+ L+ +L+H+
Sbjct: 2   QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61

Query: 403 NLVRLLGFCLEGEEKILVYEFVPNKSLDYF 432
           N+VRL       ++  LV+EF       YF
Sbjct: 62  NIVRLHDVLHSDKKLTLVFEFCDQDLKKYF 91

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 70.2 bits (171), Expect = 4e-14
 Identities = 20/89 (22%), Positives = 39/89 (43%), Gaps = 4/89 (4%)

Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRN- 403
            ++    ++GEG FG +++G  L + Q++A+K   R S     + ++E      L     
Sbjct: 5   VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDA--PQLRDEYRTYKLLAGCTG 62

Query: 404 LVRLLGFCLEGEEKILVYEFVPNKSLDYF 432
           +  +  F  EG   +LV + +     D  
Sbjct: 63  IPNVYYFGQEGLHNVLVIDLLGPSLEDLL 91

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.5 bits (172), Expect = 5e-14
 Identities = 18/96 (18%), Positives = 37/96 (38%), Gaps = 11/96 (11%)

Query: 350 TDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKL-QHRNLVRL 407
           T   LG G  G+V +     + ++ A+K L         + + EV L  +  Q  ++VR+
Sbjct: 16  TSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRI 70

Query: 408 LGFCLEGEEK----ILVYEFVPNKSLDYFLYAQSPK 439
           +             ++V E +    L   +  +  +
Sbjct: 71  VDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQ 106

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.9 bits (170), Expect = 6e-14
 Identities = 28/113 (24%), Positives = 46/113 (40%), Gaps = 12/113 (10%)

Query: 344 ATNNFSTDNKLGEGGFGEVYKG--VLPSGQEIAVKRLSRSSGQGGQE--FKNEVVLVAKL 399
           A   +    ++GEG +G+V+K   +   G+ +A+KR+   +G+ G       EV ++  L
Sbjct: 5   ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 64

Query: 400 ---QHRNLVRLLGFCLEGEEK-----ILVYEFVPNKSLDYFLYAQSPKNNNNW 444
              +H N+VRL   C            LV+E V      Y      P      
Sbjct: 65  ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTET 117

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.4 bits (169), Expect = 1e-13
 Identities = 22/100 (22%), Positives = 36/100 (36%), Gaps = 4/100 (4%)

Query: 343 VATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQE---FKNEVVLVAK 398
           V  N+F     LG+G FG+V       +G+  A+K L +       E      E  ++  
Sbjct: 2   VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61

Query: 399 LQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSP 438
            +H  L  L       +    V E+     L + L  +  
Sbjct: 62  TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERV 101

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.1 bits (168), Expect = 2e-13
 Identities = 20/80 (25%), Positives = 35/80 (43%), Gaps = 3/80 (3%)

Query: 339 ETIEVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRS--SGQGGQEFKNEVVL 395
           +TI      +   + +G G +G V       +G  +AVK+LSR   S    +    E+ L
Sbjct: 11  KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 70

Query: 396 VAKLQHRNLVRLLGFCLEGE 415
           +  ++H N++ LL       
Sbjct: 71  LKHMKHENVIGLLDVFTPAR 90

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 66.3 bits (161), Expect = 2e-13
 Identities = 18/90 (20%), Positives = 31/90 (34%), Gaps = 14/90 (15%)

Query: 352 NKLGEGGFGEVYKGVLPSGQEIAVK--RLSRSSGQ--------GGQEFKNEVVLVAKLQH 401
             +GEG    V+        E  VK  ++  +S +        G   F    +  A+ + 
Sbjct: 6   KLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEF 65

Query: 402 RNLVRLLGFC----LEGEEKILVYEFVPNK 427
           R L +L G         E   ++ E +  K
Sbjct: 66  RALQKLQGLAVPKVYAWEGNAVLMELIDAK 95

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.6 bits (164), Expect = 4e-13
 Identities = 20/123 (16%), Positives = 45/123 (36%), Gaps = 9/123 (7%)

Query: 331 LESLQFDFETIEVATNNFSTDNKLGEGGFGEVYKGVL----PSGQEIAVKRLSRSS---- 382
           L +        +V   NF     LG G +G+V+         +G+  A+K L +++    
Sbjct: 9   LRTANLTGHAEKVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQK 68

Query: 383 GQGGQEFKNEVVLVAKLQHR-NLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSPKNN 441
            +  +  + E  ++  ++    LV L        +  L+ +++    L   L  +     
Sbjct: 69  AKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTE 128

Query: 442 NNW 444
           +  
Sbjct: 129 HEV 131

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 65.2 bits (158), Expect = 3e-12
 Identities = 21/97 (21%), Positives = 34/97 (35%), Gaps = 4/97 (4%)

Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQE---FKNEVVLVAKLQH 401
           + F     LG G FG V       SG   A+K L +      ++     NE  ++  +  
Sbjct: 41  DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100

Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYAQSP 438
             LV+L     +     +V E+V    +   L     
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 137

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 62.0 bits (149), Expect = 4e-11
 Identities = 12/83 (14%), Positives = 32/83 (38%), Gaps = 2/83 (2%)

Query: 353 KLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFC 411
           KLG G F  V+    + +   +A+K +        +  ++E+ L+ ++   +  +     
Sbjct: 20  KLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVY-TEAAEDEIKLLQRVNDADNTKEDSMG 78

Query: 412 LEGEEKILVYEFVPNKSLDYFLY 434
                K+L +      +  + + 
Sbjct: 79  ANHILKLLDHFNHKGPNGVHVVM 101

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	451
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.65
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.64
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.63
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.62
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.6
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.59
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.58
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.57
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.57
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.56
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.56
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.56
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.56
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.56
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.55
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.55
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.54
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.54
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.54
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.53
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.53
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.53
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.52
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.52
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.51
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.51
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.51
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.5
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.5
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.5
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.49
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.49
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.49
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.47
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.45
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.44
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.43
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.42
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.42
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.4
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.4
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.37
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.36
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.34
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.34
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.34
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.3
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.3
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.3
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.2
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.2
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.18
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.18
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.17
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.17
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.16
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.15
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.14
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.05
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.05
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.01
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	98.38
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	98.23
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	89.31

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=1.2e-16  Score=147.99  Aligned_cols=100  Identities=27%  Similarity=0.420  Sum_probs=87.6

Q ss_pred             ccccccceecccCceeEEEEEcCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEeccC
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVP  425 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~~  425 (451)
                      ++|+..++||+|+||.||+|.+.+++.||||+++... ...++|.+|+.++++++|||||+++|++...++.+|||||++
T Consensus         5 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~~~   83 (263)
T d1sm2a_           5 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME   83 (263)
T ss_dssp             SCEEEEEEEECCSSCCEEEEEETTTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCT
T ss_pred             HHcEEEEEEeeCCCeEEEEEEECCCCEEEEEEECCCc-CcHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEecC
Confidence            4678889999999999999998888999999997543 345789999999999999999999999999999999999999


Q ss_pred             CCCHHHHHhccCCCCCCchhhhh
Q 013018          426 NKSLDYFLYAQSPKNNNNWIGQD  448 (451)
Q Consensus       426 ~GsL~~~L~~~~~~~~l~W~~r~  448 (451)
                      +|+|.++++...  ..++|.+++
T Consensus        84 ~g~L~~~l~~~~--~~~~~~~~~  104 (263)
T d1sm2a_          84 HGCLSDYLRTQR--GLFAAETLL  104 (263)
T ss_dssp             TCBHHHHHHTTT--TCCCHHHHH
T ss_pred             CCcHHHHhhccc--cCCCHHHHH
Confidence            999999998643  346777654

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.64  E-value=6.7e-17  Score=151.71  Aligned_cols=110  Identities=27%  Similarity=0.475  Sum_probs=92.8

Q ss_pred             ChHHHHHhhccccccceecccCceeEEEEEc-CCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCc
Q 013018          337 DFETIEVATNNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGE  415 (451)
Q Consensus       337 ~~~~l~~~~~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~  415 (451)
                      .++++++..++|+..++||+|+||.||+|.. .+++.||||+++... ...++|.+|+.+|++++|||||+++|++...+
T Consensus         8 ~~~~wei~~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~-~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~   86 (287)
T d1opja_           8 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP   86 (287)
T ss_dssp             TCCTTBCCGGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTC-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             CCcccEecHHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCcc-chHHHHHHHHHHHHhCCCCCEecCCccEeeCC
Confidence            3445666777889999999999999999995 468899999997543 34578999999999999999999999999999


Q ss_pred             eeeEEEeccCCCCHHHHHhccCCCCCCchhhhh
Q 013018          416 EKILVYEFVPNKSLDYFLYAQSPKNNNNWIGQD  448 (451)
Q Consensus       416 ~~~lv~ey~~~GsL~~~L~~~~~~~~l~W~~r~  448 (451)
                      ..+|||||+++|+|.++|+... ...++|..++
T Consensus        87 ~~~iv~E~~~~g~l~~~l~~~~-~~~~~~~~~~  118 (287)
T d1opja_          87 PFYIITEFMTYGNLLDYLRECN-RQEVSAVVLL  118 (287)
T ss_dssp             SCEEEEECCTTCBHHHHHHHSC-TTTSCHHHHH
T ss_pred             eeEEEeecccCcchHHHhhhcc-ccchHHHHHH
Confidence            9999999999999999998643 3457776654

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=5.9e-17  Score=150.93  Aligned_cols=107  Identities=31%  Similarity=0.387  Sum_probs=89.0

Q ss_pred             HHHHhhccccccceecccCceeEEEEEcCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeE
Q 013018          340 TIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKIL  419 (451)
Q Consensus       340 ~l~~~~~~~~~~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l  419 (451)
                      ++++..++|+..+.||+|+||.||+|.++++..||||+++... ...++|.+|+.+|.+++|||||+++|++. .++.+|
T Consensus         7 ~wei~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~-~~~~~i   84 (272)
T d1qpca_           7 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYI   84 (272)
T ss_dssp             TTBCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEE
T ss_pred             CeecCHHHeEEeEEEecCCCcEEEEEEECCCCEEEEEEEccCc-CCHHHHHHHHHHHHhCCCCCEeEEEeeec-cCCeEE
Confidence            3445567788899999999999999999888899999997543 34578999999999999999999999875 467799


Q ss_pred             EEeccCCCCHHHHHhccCCCCCCchhhhhc
Q 013018          420 VYEFVPNKSLDYFLYAQSPKNNNNWIGQDA  449 (451)
Q Consensus       420 v~ey~~~GsL~~~L~~~~~~~~l~W~~r~~  449 (451)
                      ||||+++|+|.++++.... ..++|.+++.
T Consensus        85 v~Ey~~~g~L~~~~~~~~~-~~l~~~~~~~  113 (272)
T d1qpca_          85 ITEYMENGSLVDFLKTPSG-IKLTINKLLD  113 (272)
T ss_dssp             EEECCTTCBHHHHTTSHHH-HTCCHHHHHH
T ss_pred             EEEeCCCCcHHHHHhhcCC-CCCCHHHHHH
Confidence            9999999999999876432 3478877653

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=2.9e-16  Score=144.91  Aligned_cols=100  Identities=24%  Similarity=0.370  Sum_probs=86.8

Q ss_pred             ccccccceecccCceeEEEEEcCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEeccC
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVP  425 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~~  425 (451)
                      ++|+..++||+|+||.||+|+.++++.||||.++... ...++|.+|+.++++++||||++++|++...++.++||||++
T Consensus         4 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~-~~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~~   82 (258)
T d1k2pa_           4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMA   82 (258)
T ss_dssp             CCCCCCCCCCEETTEEEEEEEETTTEEEEEEEEESSS-SCHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEECCT
T ss_pred             HHCEEeEEEecCCCeEEEEEEECCCCEEEEEEECcCc-CCHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEccC
Confidence            5788899999999999999999888899999997653 345789999999999999999999999999999999999999


Q ss_pred             CCCHHHHHhccCCCCCCchhhhh
Q 013018          426 NKSLDYFLYAQSPKNNNNWIGQD  448 (451)
Q Consensus       426 ~GsL~~~L~~~~~~~~l~W~~r~  448 (451)
                      +|+|.+++.....  .++|..++
T Consensus        83 ~g~l~~~~~~~~~--~~~~~~~~  103 (258)
T d1k2pa_          83 NGCLLNYLREMRH--RFQTQQLL  103 (258)
T ss_dssp             TEEHHHHHHSGGG--CCCHHHHH
T ss_pred             CCcHHHhhhcccc--CCcHHHHH
Confidence            9999999886543  35565543

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=2.3e-16  Score=147.79  Aligned_cols=104  Identities=26%  Similarity=0.388  Sum_probs=88.2

Q ss_pred             HhhccccccceecccCceeEEEEEcCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEe
Q 013018          343 VATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  422 (451)
Q Consensus       343 ~~~~~~~~~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  422 (451)
                      +..++|+..+.||+|+||.||+|..+++..||||++.... ...++|.+|+.+|++++|||||+++|++. .++.++|||
T Consensus        14 i~~~~~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~~-~~~~~~~~E~~~l~~l~h~nIv~~~g~~~-~~~~~lv~E   91 (285)
T d1fmka3          14 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTE   91 (285)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEC
T ss_pred             cCHHHEEEeeEEeeCCCeEEEEEEECCCCEEEEEEECccc-CCHHHHHHHHHHHHhcccCCEeEEEEEEe-cCCeEEEEE
Confidence            4456788999999999999999998888899999996543 34578999999999999999999999984 567899999


Q ss_pred             ccCCCCHHHHHhccCCCCCCchhhhhc
Q 013018          423 FVPNKSLDYFLYAQSPKNNNNWIGQDA  449 (451)
Q Consensus       423 y~~~GsL~~~L~~~~~~~~l~W~~r~~  449 (451)
                      |+++|+|..+++.... ..++|.+++.
T Consensus        92 y~~~g~l~~~~~~~~~-~~l~~~~~~~  117 (285)
T d1fmka3          92 YMSKGSLLDFLKGETG-KYLRLPQLVD  117 (285)
T ss_dssp             CCTTCBHHHHHSHHHH-TTCCHHHHHH
T ss_pred             ecCCCchhhhhhhccc-ccchHHHHHH
Confidence            9999999999987432 3488887754

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=4.7e-16  Score=144.95  Aligned_cols=104  Identities=28%  Similarity=0.421  Sum_probs=85.6

Q ss_pred             HHHhhccccccceecccCceeEEEEEcCCCcEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceee
Q 013018          341 IEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRS--SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKI  418 (451)
Q Consensus       341 l~~~~~~~~~~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~  418 (451)
                      +++..++|...++||+|+||.||+|+++.  .||||+++..  ..+..+.|.+|+.+|.+++|||||+++|++.. ++.+
T Consensus         3 wei~~~~~~~~~~lG~G~fg~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~-~~~~   79 (276)
T d1uwha_           3 WEIPDGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA-PQLA   79 (276)
T ss_dssp             CBCCTTCCCCCSEEEECSSCEEEEEESSS--EEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCE
T ss_pred             cccccccEEEEEEEeeCCCcEEEEEEECC--EEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEec-cEEE
Confidence            34556778889999999999999998743  5999999644  34456889999999999999999999998754 5689


Q ss_pred             EEEeccCCCCHHHHHhccCCCCCCchhhhhc
Q 013018          419 LVYEFVPNKSLDYFLYAQSPKNNNNWIGQDA  449 (451)
Q Consensus       419 lv~ey~~~GsL~~~L~~~~~~~~l~W~~r~~  449 (451)
                      |||||+++|+|.++|+...  ..++|.+++.
T Consensus        80 lv~Ey~~~g~L~~~l~~~~--~~~~~~~~~~  108 (276)
T d1uwha_          80 IVTQWCEGSSLYHHLHIIE--TKFEMIKLID  108 (276)
T ss_dssp             EEEECCCEEEHHHHHHTSC--CCCCHHHHHH
T ss_pred             EEEecCCCCCHHHHHhhcc--CCCCHHHHHH
Confidence            9999999999999998643  3477776553

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.58  E-value=1.4e-15  Score=143.38  Aligned_cols=102  Identities=26%  Similarity=0.453  Sum_probs=84.4

Q ss_pred             ccccccceecccCceeEEEEEcC-CC---cEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEE
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVLP-SG---QEIAVKRLSRS-SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILV  420 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l~-~g---~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv  420 (451)
                      ++|+..++||+|+||.||+|... ++   ..||||.+... ..+..++|.+|+.+|++++|||||+++|++...+..+||
T Consensus        26 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~iv  105 (299)
T d1jpaa_          26 SCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMII  105 (299)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred             hhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEE
Confidence            45667789999999999999953 23   36899998754 444567899999999999999999999999999999999


Q ss_pred             EeccCCCCHHHHHhccCCCCCCchhhhhc
Q 013018          421 YEFVPNKSLDYFLYAQSPKNNNNWIGQDA  449 (451)
Q Consensus       421 ~ey~~~GsL~~~L~~~~~~~~l~W~~r~~  449 (451)
                      |||+++|+|.++++...  ..++|.+++.
T Consensus       106 ~Ey~~~g~L~~~~~~~~--~~l~~~~~~~  132 (299)
T d1jpaa_         106 TEFMENGSLDSFLRQND--GQFTVIQLVG  132 (299)
T ss_dssp             EECCTTEEHHHHHHTTT--TCSCHHHHHH
T ss_pred             EEecCCCcceeeecccc--CCCCHHHHHH
Confidence            99999999999998643  3478877653

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.57  E-value=1.1e-15  Score=143.21  Aligned_cols=91  Identities=23%  Similarity=0.375  Sum_probs=82.6

Q ss_pred             ccccccceecccCceeEEEEE-cCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEecc
Q 013018          346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFV  424 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~  424 (451)
                      +.|+..+.||+|+||.||+|. ..+++.||||++.....+..+.|.+|+.+|++++|||||++++++...+..+|||||+
T Consensus        12 d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy~   91 (288)
T d2jfla1          12 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFC   91 (288)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             cCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEecC
Confidence            457888999999999999999 4678999999998766666678999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcc
Q 013018          425 PNKSLDYFLYAQ  436 (451)
Q Consensus       425 ~~GsL~~~L~~~  436 (451)
                      ++|+|.+++.+.
T Consensus        92 ~~g~L~~~~~~~  103 (288)
T d2jfla1          92 AGGAVDAVMLEL  103 (288)
T ss_dssp             TTEEHHHHHHHH
T ss_pred             CCCcHHHHHHhc
Confidence            999999998764

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.57  E-value=3.2e-16  Score=144.98  Aligned_cols=102  Identities=26%  Similarity=0.392  Sum_probs=83.3

Q ss_pred             hhccccccceecccCceeEEEEEcCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEe-CceeeEEEe
Q 013018          344 ATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLE-GEEKILVYE  422 (451)
Q Consensus       344 ~~~~~~~~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~~lv~e  422 (451)
                      ..++|+..++||+|+||.||+|.+ .|..||||+++...  ..++|.+|++++++++||||++++|++.. .+..+||||
T Consensus         5 ~~~~~~~~~~lG~G~fg~Vy~~~~-~~~~vAvK~i~~~~--~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~e   81 (262)
T d1byga_           5 NMKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE   81 (262)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEEC
T ss_pred             CHHHeEEeEEEecCCCeEEEEEEE-CCeEEEEEEECcHH--HHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEEe
Confidence            445677889999999999999998 57899999996542  34789999999999999999999999865 456899999


Q ss_pred             ccCCCCHHHHHhccCCCCCCchhhhhc
Q 013018          423 FVPNKSLDYFLYAQSPKNNNNWIGQDA  449 (451)
Q Consensus       423 y~~~GsL~~~L~~~~~~~~l~W~~r~~  449 (451)
                      |+++|+|.++|+.++ ...++|.+++.
T Consensus        82 y~~~g~L~~~l~~~~-~~~l~~~~~~~  107 (262)
T d1byga_          82 YMAKGSLVDYLRSRG-RSVLGGDCLLK  107 (262)
T ss_dssp             CCTTEEHHHHHHHHH-HHHCCHHHHHH
T ss_pred             ccCCCCHHHHHHhcC-CCCCCHHHHHH
Confidence            999999999998642 23477876654

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=1.1e-15  Score=145.73  Aligned_cols=101  Identities=21%  Similarity=0.201  Sum_probs=86.8

Q ss_pred             HhhccccccceecccCceeEEEEE-cCCCcEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEE
Q 013018          343 VATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSS-GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILV  420 (451)
Q Consensus       343 ~~~~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv  420 (451)
                      +..++|+..++||+|+||.||++. ..+|+.||+|+++... ....+.+.+|+.+|++++|||||++++++...+..+||
T Consensus         3 l~~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iV   82 (322)
T d1s9ja_           3 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC   82 (322)
T ss_dssp             CCGGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEE
T ss_pred             CCccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence            345778999999999999999999 5678999999997543 33457899999999999999999999999999999999


Q ss_pred             EeccCCCCHHHHHhccCCCCCCchhh
Q 013018          421 YEFVPNKSLDYFLYAQSPKNNNNWIG  446 (451)
Q Consensus       421 ~ey~~~GsL~~~L~~~~~~~~l~W~~  446 (451)
                      |||+++|+|.++|+++..   +++.+
T Consensus        83 mEy~~gg~L~~~l~~~~~---l~~~~  105 (322)
T d1s9ja_          83 MEHMDGGSLDQVLKKAGR---IPEQI  105 (322)
T ss_dssp             EECCTTEEHHHHHHHHSS---CCHHH
T ss_pred             EEcCCCCcHHHHHhhcCC---CCHHH
Confidence            999999999999986543   55543

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.56  E-value=2.2e-15  Score=142.32  Aligned_cols=100  Identities=31%  Similarity=0.563  Sum_probs=87.2

Q ss_pred             hHHHHHhhccccccceecccCceeEEEEEcC------CCcEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCcccceeE
Q 013018          338 FETIEVATNNFSTDNKLGEGGFGEVYKGVLP------SGQEIAVKRLSRSS-GQGGQEFKNEVVLVAKLQHRNLVRLLGF  410 (451)
Q Consensus       338 ~~~l~~~~~~~~~~~~lG~G~fg~V~~~~l~------~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~  410 (451)
                      +.+++.++++|+..+.||+|+||.||+|+..      +++.||||++.... .+..++|.+|+.+|++++||||++++++
T Consensus         5 ~~~~e~p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~   84 (301)
T d1lufa_           5 LLSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGV   84 (301)
T ss_dssp             HHHTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred             hhhccCCHHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceee
Confidence            4556778889999999999999999999853      45789999997653 3345789999999999999999999999


Q ss_pred             EEeCceeeEEEeccCCCCHHHHHhccC
Q 013018          411 CLEGEEKILVYEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       411 ~~~~~~~~lv~ey~~~GsL~~~L~~~~  437 (451)
                      +...+..++++||+++|+|.++|+...
T Consensus        85 ~~~~~~~~~v~e~~~~g~L~~~l~~~~  111 (301)
T d1lufa_          85 CAVGKPMCLLFEYMAYGDLNEFLRSMS  111 (301)
T ss_dssp             ECSSSSCEEEEECCTTCBHHHHHHHTC
T ss_pred             eccCCceEEEEEecCCCcHHHHHHhcC
Confidence            999999999999999999999998643

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=2.6e-15  Score=140.46  Aligned_cols=101  Identities=27%  Similarity=0.449  Sum_probs=81.5

Q ss_pred             hccccccc-eecccCceeEEEEEcC---CCcEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeE
Q 013018          345 TNNFSTDN-KLGEGGFGEVYKGVLP---SGQEIAVKRLSRSS-GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKIL  419 (451)
Q Consensus       345 ~~~~~~~~-~lG~G~fg~V~~~~l~---~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l  419 (451)
                      .+++...+ +||+|+||.||+|...   ++..||||.++... ....++|.+|+.+|++++|||||+++|++.. +..+|
T Consensus         7 ~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-~~~~l   85 (285)
T d1u59a_           7 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALML   85 (285)
T ss_dssp             GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEE
T ss_pred             ccCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeecc-CeEEE
Confidence            45566666 4999999999999853   35579999997653 3445789999999999999999999999864 56899


Q ss_pred             EEeccCCCCHHHHHhccCCCCCCchhhhh
Q 013018          420 VYEFVPNKSLDYFLYAQSPKNNNNWIGQD  448 (451)
Q Consensus       420 v~ey~~~GsL~~~L~~~~~~~~l~W~~r~  448 (451)
                      ||||+++|+|.++++..+  ..++|.+++
T Consensus        86 vmE~~~~g~L~~~l~~~~--~~l~~~~~~  112 (285)
T d1u59a_          86 VMEMAGGGPLHKFLVGKR--EEIPVSNVA  112 (285)
T ss_dssp             EEECCTTEEHHHHHTTCT--TTSCHHHHH
T ss_pred             EEEeCCCCcHHHHhhccc--cCCCHHHHH
Confidence            999999999999987543  346776554

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=5e-15  Score=138.98  Aligned_cols=91  Identities=24%  Similarity=0.456  Sum_probs=82.2

Q ss_pred             ccccccceecccCceeEEEEE-cCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEecc
Q 013018          346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFV  424 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~  424 (451)
                      ++|...++||+|+||.||++. ..+|+.||||++........+.+.+|+.+|++++|||||++++++...+..+|||||+
T Consensus        20 ~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~   99 (293)
T d1yhwa1          20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL   99 (293)
T ss_dssp             TTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             cccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEEec
Confidence            468889999999999999999 5679999999997655555678999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcc
Q 013018          425 PNKSLDYFLYAQ  436 (451)
Q Consensus       425 ~~GsL~~~L~~~  436 (451)
                      ++|+|.+++..+
T Consensus       100 ~gg~L~~~~~~~  111 (293)
T d1yhwa1         100 AGGSLTDVVTET  111 (293)
T ss_dssp             TTCBHHHHHHHS
T ss_pred             CCCcHHHHhhcc
Confidence            999999988763

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=5.2e-15  Score=139.08  Aligned_cols=92  Identities=26%  Similarity=0.417  Sum_probs=81.2

Q ss_pred             ccccccceecccCceeEEEEE-cCCCcEEEEEEeccCC------hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceee
Q 013018          346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSS------GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKI  418 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~------~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~  418 (451)
                      ++|...++||+|+||.||++. ..+|+.||||++....      ....+.|.+|+.+|++++|||||++++++...+..+
T Consensus        10 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~   89 (293)
T d1jksa_          10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI   89 (293)
T ss_dssp             GTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             cCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEE
Confidence            568889999999999999999 4679999999986432      123578999999999999999999999999999999


Q ss_pred             EEEeccCCCCHHHHHhccC
Q 013018          419 LVYEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       419 lv~ey~~~GsL~~~L~~~~  437 (451)
                      |||||+++|+|.++|..+.
T Consensus        90 iv~E~~~gg~L~~~i~~~~  108 (293)
T d1jksa_          90 LILELVAGGELFDFLAEKE  108 (293)
T ss_dssp             EEEECCCSCBHHHHHHHHS
T ss_pred             EEEEcCCCccccchhcccc
Confidence            9999999999999998754

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.55  E-value=3.6e-15  Score=138.30  Aligned_cols=101  Identities=19%  Similarity=0.262  Sum_probs=82.1

Q ss_pred             ccccccceecccCceeEEEEE-cCCCcEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCcccceeEEEe--CceeeEE
Q 013018          346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRS--SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLE--GEEKILV  420 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~--~~~~~lv  420 (451)
                      ++|+..+.||+|+||.||++. ..+|+.||||.+...  .....+.+.+|+.+|++++|||||++++++..  ...++||
T Consensus         4 edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~iv   83 (269)
T d2java1           4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIV   83 (269)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEEE
T ss_pred             hhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEEE
Confidence            568889999999999999998 567999999999754  33445779999999999999999999999864  4568999


Q ss_pred             EeccCCCCHHHHHhccC-CCCCCchhh
Q 013018          421 YEFVPNKSLDYFLYAQS-PKNNNNWIG  446 (451)
Q Consensus       421 ~ey~~~GsL~~~L~~~~-~~~~l~W~~  446 (451)
                      |||+++|+|.+++.... .+..+++.+
T Consensus        84 mEy~~~g~L~~~i~~~~~~~~~l~e~~  110 (269)
T d2java1          84 MEYCEGGDLASVITKGTKERQYLDEEF  110 (269)
T ss_dssp             EECCTTEEHHHHHHHHHHHTCCCCHHH
T ss_pred             EecCCCCcHHHHHHhccccCCCCCHHH
Confidence            99999999999997533 233455543

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.55  E-value=5.7e-15  Score=137.60  Aligned_cols=94  Identities=27%  Similarity=0.365  Sum_probs=76.0

Q ss_pred             ceecccCceeEEEEEcCC---CcEEEEEEeccCC--hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEeccCC
Q 013018          352 NKLGEGGFGEVYKGVLPS---GQEIAVKRLSRSS--GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPN  426 (451)
Q Consensus       352 ~~lG~G~fg~V~~~~l~~---g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~~~  426 (451)
                      ++||+|+||.||+|.+.+   ++.||||+++...  ....++|.+|+.+|++++|||||+++|++.. +..+|||||+++
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~-~~~~lvmE~~~~   91 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL   91 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred             CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEecc-CCEEEEEEcCCC
Confidence            579999999999998543   4689999996542  2335789999999999999999999999854 567899999999


Q ss_pred             CCHHHHHhccCCCCCCchhhhhc
Q 013018          427 KSLDYFLYAQSPKNNNNWIGQDA  449 (451)
Q Consensus       427 GsL~~~L~~~~~~~~l~W~~r~~  449 (451)
                      |+|.++++....   ++|.+++.
T Consensus        92 g~L~~~l~~~~~---l~~~~~~~  111 (277)
T d1xbba_          92 GPLNKYLQQNRH---VKDKNIIE  111 (277)
T ss_dssp             EEHHHHHHHCTT---CCHHHHHH
T ss_pred             CcHHHHHhhccC---CCHHHHHH
Confidence            999999987543   77776543

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.54  E-value=2.7e-15  Score=139.27  Aligned_cols=92  Identities=25%  Similarity=0.369  Sum_probs=78.6

Q ss_pred             ccccccceecccCceeEEEEE-cCCCcEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEec
Q 013018          346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSS-GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  423 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey  423 (451)
                      ++|+..++||+|+||.||++. ..+|+.||||++.... .+..+.+.+|+.+|++++||||+++++++...+..+|||||
T Consensus         5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmEy   84 (271)
T d1nvra_           5 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY   84 (271)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             cceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEEec
Confidence            468889999999999999999 4679999999997543 23346799999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhccC
Q 013018          424 VPNKSLDYFLYAQS  437 (451)
Q Consensus       424 ~~~GsL~~~L~~~~  437 (451)
                      +++|+|.++|+.+.
T Consensus        85 ~~gg~L~~~l~~~~   98 (271)
T d1nvra_          85 CSGGELFDRIEPDI   98 (271)
T ss_dssp             CTTEEGGGGSBTTT
T ss_pred             cCCCcHHHHHhcCC
Confidence            99999999997543

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.54  E-value=5.5e-15  Score=142.25  Aligned_cols=99  Identities=20%  Similarity=0.321  Sum_probs=86.2

Q ss_pred             ccccccceecccCceeEEEEE-cCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEecc
Q 013018          346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFV  424 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~  424 (451)
                      ++|...+.||+|+||.||++. ..+|+.||||++........+.+.+|+.+|++++|||||++++++...+..+|||||+
T Consensus        26 ~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~  105 (350)
T d1koaa2          26 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM  105 (350)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcC
Confidence            468889999999999999999 5679999999998766666678999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhccCCCCCCchhh
Q 013018          425 PNKSLDYFLYAQSPKNNNNWIG  446 (451)
Q Consensus       425 ~~GsL~~~L~~~~~~~~l~W~~  446 (451)
                      ++|+|.++|.+...  .+++..
T Consensus       106 ~gg~L~~~l~~~~~--~l~e~~  125 (350)
T d1koaa2         106 SGGELFEKVADEHN--KMSEDE  125 (350)
T ss_dssp             CSCBHHHHHTCTTS--CBCHHH
T ss_pred             CCCCHHHHHHhhcC--CCCHHH
Confidence            99999999975432  355543

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.54  E-value=6.2e-15  Score=139.62  Aligned_cols=105  Identities=28%  Similarity=0.439  Sum_probs=84.1

Q ss_pred             hccccccceecccCceeEEEEEcC-CCc--EEEEEEeccC-ChhhHHHHHHHHHHHhcC-CCCCcccceeEEEeCceeeE
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGVLP-SGQ--EIAVKRLSRS-SGQGGQEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKIL  419 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~l~-~g~--~vavK~l~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~l  419 (451)
                      .++|+..++||+|+||.||+|... ++.  .||||++... ..+..++|.+|+.+|.++ +|||||+++|++...+..+|
T Consensus         9 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~i   88 (309)
T d1fvra_           9 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL   88 (309)
T ss_dssp             GGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEE
T ss_pred             HHHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeEE
Confidence            356788899999999999999964 444  5788888654 334456899999999999 79999999999999999999


Q ss_pred             EEeccCCCCHHHHHhccC-------------CCCCCchhhhhc
Q 013018          420 VYEFVPNKSLDYFLYAQS-------------PKNNNNWIGQDA  449 (451)
Q Consensus       420 v~ey~~~GsL~~~L~~~~-------------~~~~l~W~~r~~  449 (451)
                      ||||+++|+|.++|+.+.             ....|+|.++++
T Consensus        89 V~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  131 (309)
T d1fvra_          89 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLH  131 (309)
T ss_dssp             EECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHH
T ss_pred             EEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHH
Confidence            999999999999998652             234578876643

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.53  E-value=9.6e-15  Score=134.92  Aligned_cols=92  Identities=27%  Similarity=0.439  Sum_probs=80.8

Q ss_pred             ccccccceecccCceeEEEEEc-CCCcEEEEEEeccCC---hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEE
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSS---GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  421 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l-~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~  421 (451)
                      ++|...+.||+|+||.||++.. .+++.||+|.+....   ....+.+.+|+.+|++++||||+++++++...+..+|||
T Consensus         6 ~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ivm   85 (263)
T d2j4za1           6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLIL   85 (263)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEEE
Confidence            4678889999999999999994 578999999986432   233567999999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhccC
Q 013018          422 EFVPNKSLDYFLYAQS  437 (451)
Q Consensus       422 ey~~~GsL~~~L~~~~  437 (451)
                      ||+++|+|.++|+...
T Consensus        86 Ey~~~g~L~~~l~~~~  101 (263)
T d2j4za1          86 EYAPLGTVYRELQKLS  101 (263)
T ss_dssp             ECCTTCBHHHHHHHHS
T ss_pred             eecCCCcHHHHHhhcC
Confidence            9999999999998644

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.53  E-value=3.5e-15  Score=141.28  Aligned_cols=110  Identities=25%  Similarity=0.429  Sum_probs=90.1

Q ss_pred             HHHHhhccccccceecccCceeEEEEEcC------CCcEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCcccceeEEE
Q 013018          340 TIEVATNNFSTDNKLGEGGFGEVYKGVLP------SGQEIAVKRLSRS-SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCL  412 (451)
Q Consensus       340 ~l~~~~~~~~~~~~lG~G~fg~V~~~~l~------~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~  412 (451)
                      ++++..++|...+.||+|+||.||+|.+.      .+..||||+++.. ..+....|.+|+.++++++||||++++|++.
T Consensus        14 ~~ei~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~   93 (308)
T d1p4oa_          14 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS   93 (308)
T ss_dssp             TTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEEC
T ss_pred             ceeecHHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEe
Confidence            45566678889999999999999999853      3578999999754 3344567999999999999999999999999


Q ss_pred             eCceeeEEEeccCCCCHHHHHhccC-------CCCCCchhhhhc
Q 013018          413 EGEEKILVYEFVPNKSLDYFLYAQS-------PKNNNNWIGQDA  449 (451)
Q Consensus       413 ~~~~~~lv~ey~~~GsL~~~L~~~~-------~~~~l~W~~r~~  449 (451)
                      ..++.++||||+++|+|.++++..+       ....++|.++++
T Consensus        94 ~~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  137 (308)
T d1p4oa_          94 QGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQ  137 (308)
T ss_dssp             SSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHH
T ss_pred             cCCceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHH
Confidence            9999999999999999999998542       223457766643

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.53  E-value=1e-14  Score=140.50  Aligned_cols=92  Identities=24%  Similarity=0.354  Sum_probs=82.8

Q ss_pred             ccccccceecccCceeEEEEE-cCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEecc
Q 013018          346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFV  424 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~  424 (451)
                      ++|+..++||+|+||.||++. ..+|+.||||++........+.+.+|+.+|++++|||||++++++...+..+|||||+
T Consensus        29 d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~  108 (352)
T d1koba_          29 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFL  108 (352)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECC
T ss_pred             cceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcC
Confidence            468889999999999999999 5679999999998766556678999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhccC
Q 013018          425 PNKSLDYFLYAQS  437 (451)
Q Consensus       425 ~~GsL~~~L~~~~  437 (451)
                      ++|+|.+++....
T Consensus       109 ~gg~L~~~~~~~~  121 (352)
T d1koba_         109 SGGELFDRIAAED  121 (352)
T ss_dssp             CCCBHHHHTTCTT
T ss_pred             CCChHHHHHHhcC
Confidence            9999999887543

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=7.1e-15  Score=137.45  Aligned_cols=103  Identities=25%  Similarity=0.469  Sum_probs=85.3

Q ss_pred             hccccccceecccCceeEEEEEcCCC-----cEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceee
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGVLPSG-----QEIAVKRLSRS-SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKI  418 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~l~~g-----~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~  418 (451)
                      .+.|+..++||+|+||.||+|.++..     ..||||++... ......+|.+|+.+|.+++|||||+++|++...+..+
T Consensus         6 ~~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~   85 (283)
T d1mqba_           6 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMM   85 (283)
T ss_dssp             TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEE
T ss_pred             HHHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceE
Confidence            35677889999999999999996432     37999999754 3344567999999999999999999999999999999


Q ss_pred             EEEeccCCCCHHHHHhccCCCCCCchhhhhc
Q 013018          419 LVYEFVPNKSLDYFLYAQSPKNNNNWIGQDA  449 (451)
Q Consensus       419 lv~ey~~~GsL~~~L~~~~~~~~l~W~~r~~  449 (451)
                      +|+||+++|+|.+++....  ..++|.++++
T Consensus        86 ~v~e~~~~~~l~~~~~~~~--~~~~~~~~~~  114 (283)
T d1mqba_          86 IITEYMENGALDKFLREKD--GEFSVLQLVG  114 (283)
T ss_dssp             EEEECCTTEEHHHHHHHTT--TCSCHHHHHH
T ss_pred             EEEEecccCcchhhhhccc--ccccHHHHHH
Confidence            9999999999999888643  3477776653

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.52  E-value=1e-14  Score=137.98  Aligned_cols=99  Identities=25%  Similarity=0.370  Sum_probs=83.4

Q ss_pred             ccccccceecccCceeEEEEE-cCCCcEEEEEEeccCC---hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEE
Q 013018          346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSS---GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  421 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~  421 (451)
                      +.|+..++||+|+||.||+|. ..+++.||||++....   ....+.+.+|+.+|++++|||||++++++...+..+|||
T Consensus        15 ~~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~   94 (309)
T d1u5ra_          15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM   94 (309)
T ss_dssp             HHEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             HhcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEEE
Confidence            347888999999999999998 5678999999997543   233467999999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhccCCCCCCchhhh
Q 013018          422 EFVPNKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       422 ey~~~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                      ||+++|+|..++..+.   .++|.+.
T Consensus        95 E~~~~g~l~~~~~~~~---~l~e~~~  117 (309)
T d1u5ra_          95 EYCLGSASDLLEVHKK---PLQEVEI  117 (309)
T ss_dssp             ECCSEEHHHHHHHHTS---CCCHHHH
T ss_pred             EecCCCchHHHHHhCC---CCCHHHH
Confidence            9999999987776543   3666543

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.51  E-value=2.1e-14  Score=133.15  Aligned_cols=89  Identities=29%  Similarity=0.413  Sum_probs=75.6

Q ss_pred             cccceecccCceeEEEEE-cCCCcEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCcccceeEEEe----CceeeEEE
Q 013018          349 STDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRS--SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLE----GEEKILVY  421 (451)
Q Consensus       349 ~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~----~~~~~lv~  421 (451)
                      +..++||+|+||.||+|. ..+++.||+|.+...  .....+.|.+|+++|++++|||||++++++..    ...++|||
T Consensus        12 ~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~ivm   91 (270)
T d1t4ha_          12 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT   91 (270)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEE
T ss_pred             EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEEE
Confidence            456789999999999999 456889999998654  33445789999999999999999999999865    34678999


Q ss_pred             eccCCCCHHHHHhccC
Q 013018          422 EFVPNKSLDYFLYAQS  437 (451)
Q Consensus       422 ey~~~GsL~~~L~~~~  437 (451)
                      ||+++|+|.++|+...
T Consensus        92 E~~~~g~L~~~l~~~~  107 (270)
T d1t4ha_          92 ELMTSGTLKTYLKRFK  107 (270)
T ss_dssp             ECCCSCBHHHHHHHHS
T ss_pred             eCCCCCcHHHHHhccc
Confidence            9999999999998654

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.51  E-value=1.2e-14  Score=137.30  Aligned_cols=93  Identities=20%  Similarity=0.312  Sum_probs=76.8

Q ss_pred             hccccccceecccCceeEEEEE-cCCCcEEEEEEeccCCh-hhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEe
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSG-QGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  422 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  422 (451)
                      .+.|+..++||+|+||.||++. ..+++.||||.+..... .....+.+|+.+|++++|||||++++++...+..+||||
T Consensus         8 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvmE   87 (307)
T d1a06a_           8 RDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQ   87 (307)
T ss_dssp             GGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             ccceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence            3558889999999999999999 45789999999975432 234568899999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhccC
Q 013018          423 FVPNKSLDYFLYAQS  437 (451)
Q Consensus       423 y~~~GsL~~~L~~~~  437 (451)
                      |+++|+|.++|..+.
T Consensus        88 ~~~gg~L~~~l~~~~  102 (307)
T d1a06a_          88 LVSGGELFDRIVEKG  102 (307)
T ss_dssp             CCCSCBHHHHHHTCS
T ss_pred             ccCCCcHHHhhhccc
Confidence            999999999998643

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.51  E-value=7.3e-15  Score=140.12  Aligned_cols=97  Identities=26%  Similarity=0.443  Sum_probs=80.7

Q ss_pred             HHHhhccccccceecccCceeEEEEEcCC-C-----cEEEEEEeccCC-hhhHHHHHHHHHHHhcC-CCCCcccceeEEE
Q 013018          341 IEVATNNFSTDNKLGEGGFGEVYKGVLPS-G-----QEIAVKRLSRSS-GQGGQEFKNEVVLVAKL-QHRNLVRLLGFCL  412 (451)
Q Consensus       341 l~~~~~~~~~~~~lG~G~fg~V~~~~l~~-g-----~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~  412 (451)
                      +++..++|+..++||+|+||.||+|.... +     ..||||.+.... ......|.+|+.+|.++ +|||||+++|++.
T Consensus        32 wei~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~  111 (325)
T d1rjba_          32 WEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACT  111 (325)
T ss_dssp             GBCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             ccCCHHHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEe
Confidence            45567789999999999999999998532 2     369999986543 33346899999999998 8999999999999


Q ss_pred             eCceeeEEEeccCCCCHHHHHhccC
Q 013018          413 EGEEKILVYEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       413 ~~~~~~lv~ey~~~GsL~~~L~~~~  437 (451)
                      ..+..+|||||+++|+|.++|+.++
T Consensus       112 ~~~~~~lv~Ey~~~g~L~~~l~~~~  136 (325)
T d1rjba_         112 LSGPIYLIFEYCCYGDLLNYLRSKR  136 (325)
T ss_dssp             SSSSCEEEEECCTTCBHHHHHHTTT
T ss_pred             eCCeEEEEEEcCCCCcHHHHHHhcc
Confidence            9999999999999999999998754

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.50  E-value=2.1e-14  Score=133.59  Aligned_cols=98  Identities=21%  Similarity=0.269  Sum_probs=83.0

Q ss_pred             ccccccceecccCceeEEEEE-cCCCcEEEEEEeccCCh---------hhHHHHHHHHHHHhcCC-CCCcccceeEEEeC
Q 013018          346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSG---------QGGQEFKNEVVLVAKLQ-HRNLVRLLGFCLEG  414 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~---------~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~  414 (451)
                      ++|+..+.||+|+||+||+++ ..+|+.+|||++.....         ...+.+.+|+.+|++++ ||||+++++++..+
T Consensus         3 ~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~   82 (277)
T d1phka_           3 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETN   82 (277)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECS
T ss_pred             ccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecccC
Confidence            568889999999999999999 56799999999965421         11246889999999997 99999999999999


Q ss_pred             ceeeEEEeccCCCCHHHHHhccCCCCCCchhh
Q 013018          415 EEKILVYEFVPNKSLDYFLYAQSPKNNNNWIG  446 (451)
Q Consensus       415 ~~~~lv~ey~~~GsL~~~L~~~~~~~~l~W~~  446 (451)
                      +..+|||||+++|+|.++|+.+.+   ++|.+
T Consensus        83 ~~~~ivmE~~~~g~L~~~l~~~~~---l~e~~  111 (277)
T d1phka_          83 TFFFLVFDLMKKGELFDYLTEKVT---LSEKE  111 (277)
T ss_dssp             SEEEEEEECCTTCBHHHHHHHHSS---CCHHH
T ss_pred             cceEEEEEcCCCchHHHHHHhcCC---CCHHH
Confidence            999999999999999999986543   55544

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=1.9e-14  Score=136.84  Aligned_cols=92  Identities=21%  Similarity=0.302  Sum_probs=81.5

Q ss_pred             hccccccceecccCceeEEEEE-cCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEec
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  423 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey  423 (451)
                      .++|...++||+|+||.||++. ..+++.||||.++.... ....+.+|+.+|++++|||||++++++...+..+|||||
T Consensus         4 ~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~~-~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE~   82 (321)
T d1tkia_           4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGT-DQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF   82 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTH-HHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCcc-cHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEec
Confidence            3568889999999999999999 45789999999976543 345688999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhccC
Q 013018          424 VPNKSLDYFLYAQS  437 (451)
Q Consensus       424 ~~~GsL~~~L~~~~  437 (451)
                      +++|+|.++|+.+.
T Consensus        83 ~~gg~L~~~i~~~~   96 (321)
T d1tkia_          83 ISGLDIFERINTSA   96 (321)
T ss_dssp             CCCCBHHHHHTSSS
T ss_pred             CCCCcHHHHHHhcC
Confidence            99999999998643

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=8.2e-15  Score=138.89  Aligned_cols=98  Identities=29%  Similarity=0.433  Sum_probs=84.2

Q ss_pred             HHHHhhccccccceecccCceeEEEEEc------CCCcEEEEEEeccCC-hhhHHHHHHHHHHHhcC-CCCCcccceeEE
Q 013018          340 TIEVATNNFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRLSRSS-GQGGQEFKNEVVLVAKL-QHRNLVRLLGFC  411 (451)
Q Consensus       340 ~l~~~~~~~~~~~~lG~G~fg~V~~~~l------~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~g~~  411 (451)
                      .+++..++|+..++||+|+||.||+|++      ..++.||||+++... .....+|.+|+.+++++ +|||||+++|++
T Consensus        17 ~~~~~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~   96 (311)
T d1t46a_          17 KWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGAC   96 (311)
T ss_dssp             GGBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             cccCCHHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEE
Confidence            3455667888899999999999999984      245689999997643 34456899999999999 699999999999


Q ss_pred             EeCceeeEEEeccCCCCHHHHHhccC
Q 013018          412 LEGEEKILVYEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       412 ~~~~~~~lv~ey~~~GsL~~~L~~~~  437 (451)
                      ...+..+|||||+++|+|.++|+...
T Consensus        97 ~~~~~~~lvmE~~~~g~l~~~l~~~~  122 (311)
T d1t46a_          97 TIGGPTLVITEYCCYGDLLNFLRRKR  122 (311)
T ss_dssp             CSSSSCEEEEECCTTEEHHHHHHHTT
T ss_pred             eeCCEEEEEEEcCCCCCHHHHHHhcc
Confidence            99999999999999999999999754

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.49  E-value=2.7e-14  Score=135.17  Aligned_cols=95  Identities=27%  Similarity=0.481  Sum_probs=77.5

Q ss_pred             cceecccCceeEEEEEcCCC----cEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeC-ceeeEEEecc
Q 013018          351 DNKLGEGGFGEVYKGVLPSG----QEIAVKRLSRS-SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEG-EEKILVYEFV  424 (451)
Q Consensus       351 ~~~lG~G~fg~V~~~~l~~g----~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-~~~~lv~ey~  424 (451)
                      .++||+|+||+||+|.+.+.    ..||||+++.. .....++|.+|+++|++++||||++++|++... ...++||||+
T Consensus        32 ~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E~~  111 (311)
T d1r0pa_          32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM  111 (311)
T ss_dssp             EEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEECC
T ss_pred             ceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEEEe
Confidence            57899999999999996432    35899999753 445568899999999999999999999998764 5889999999


Q ss_pred             CCCCHHHHHhccCCCCCCchhhh
Q 013018          425 PNKSLDYFLYAQSPKNNNNWIGQ  447 (451)
Q Consensus       425 ~~GsL~~~L~~~~~~~~l~W~~r  447 (451)
                      ++|+|.++++....  .++|..+
T Consensus       112 ~~g~l~~~~~~~~~--~~~~~~~  132 (311)
T d1r0pa_         112 KHGDLRNFIRNETH--NPTVKDL  132 (311)
T ss_dssp             TTCBHHHHHHCTTC--CCBHHHH
T ss_pred             ecCchhhhhccccc--cchHHHH
Confidence            99999999986543  3455444

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.49  E-value=2.5e-14  Score=134.95  Aligned_cols=96  Identities=24%  Similarity=0.364  Sum_probs=77.3

Q ss_pred             ccccccceecccCceeEEEEEcCCCcEEEEEEeccCChhhHHHHH--HHHHHHhcCCCCCcccceeEEEeCc----eeeE
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFK--NEVVLVAKLQHRNLVRLLGFCLEGE----EKIL  419 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~~~~~~~~~--~E~~~l~~l~h~niv~l~g~~~~~~----~~~l  419 (451)
                      +.+...+.||+|+||.||+|++ +|+.||||+++...   .+++.  .|+..+.+++||||++++|++...+    .++|
T Consensus         3 ~~~~l~~~iG~G~fg~Vy~~~~-~g~~vAvK~~~~~~---~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~l   78 (303)
T d1vjya_           3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL   78 (303)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccc---hhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEE
Confidence            3466788999999999999997 78999999996442   23344  4555556789999999999998643    5789


Q ss_pred             EEeccCCCCHHHHHhccCCCCCCchhhhhc
Q 013018          420 VYEFVPNKSLDYFLYAQSPKNNNNWIGQDA  449 (451)
Q Consensus       420 v~ey~~~GsL~~~L~~~~~~~~l~W~~r~~  449 (451)
                      ||||+++|+|.++|++.    .++|.+++.
T Consensus        79 v~Ey~~~g~L~~~l~~~----~l~~~~~~~  104 (303)
T d1vjya_          79 VSDYHEHGSLFDYLNRY----TVTVEGMIK  104 (303)
T ss_dssp             EEECCTTCBHHHHHHHC----CBCHHHHHH
T ss_pred             EEecccCCCHHHHHhcC----CCCHHHHHH
Confidence            99999999999999864    378888764

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.49  E-value=1.6e-14  Score=135.14  Aligned_cols=92  Identities=22%  Similarity=0.287  Sum_probs=81.0

Q ss_pred             ccccccceecccCceeEEEEE-cCCCcEEEEEEeccCC---hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEE
Q 013018          346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSS---GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  421 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~  421 (451)
                      ++|+..+.||+|+||.||++. ..+|+.||||++....   ....+.+.+|+.+|++++||||+++++++...+..+|||
T Consensus         8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivm   87 (288)
T d1uu3a_           8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL   87 (288)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEEE
T ss_pred             CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEEE
Confidence            468889999999999999999 4678999999996432   233467999999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhccC
Q 013018          422 EFVPNKSLDYFLYAQS  437 (451)
Q Consensus       422 ey~~~GsL~~~L~~~~  437 (451)
                      ||+++|+|.+++...+
T Consensus        88 Ey~~gg~L~~~~~~~~  103 (288)
T d1uu3a_          88 SYAKNGELLKYIRKIG  103 (288)
T ss_dssp             CCCTTEEHHHHHHHHS
T ss_pred             EccCCCCHHHhhhccC
Confidence            9999999999988654

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.47  E-value=1.6e-14  Score=134.21  Aligned_cols=104  Identities=20%  Similarity=0.361  Sum_probs=84.0

Q ss_pred             HHhhccccccceecccCceeEEEEEcCC----CcEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCce
Q 013018          342 EVATNNFSTDNKLGEGGFGEVYKGVLPS----GQEIAVKRLSRSS-GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEE  416 (451)
Q Consensus       342 ~~~~~~~~~~~~lG~G~fg~V~~~~l~~----g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~  416 (451)
                      ++..++|+..+.||+|+||.||+|....    +..||||.+.... ....+.|.+|+.+|++++||||++++|++. .+.
T Consensus         3 ei~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~   81 (273)
T d1mp8a_           3 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENP   81 (273)
T ss_dssp             BCCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSS
T ss_pred             CcCHHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCe
Confidence            3556788999999999999999998532    3568999986543 334578999999999999999999999985 567


Q ss_pred             eeEEEeccCCCCHHHHHhccCCCCCCchhhhh
Q 013018          417 KILVYEFVPNKSLDYFLYAQSPKNNNNWIGQD  448 (451)
Q Consensus       417 ~~lv~ey~~~GsL~~~L~~~~~~~~l~W~~r~  448 (451)
                      .+|||||+++|+|.+++....  ..++|..++
T Consensus        82 ~~iv~E~~~~g~l~~~~~~~~--~~l~~~~~~  111 (273)
T d1mp8a_          82 VWIIMELCTLGELRSFLQVRK--YSLDLASLI  111 (273)
T ss_dssp             CEEEEECCTTEEHHHHHHHTT--TTSCHHHHH
T ss_pred             EEEEEEeccCCcHHhhhhccC--CCCCHHHHH
Confidence            899999999999999987643  346665543

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.45  E-value=7.6e-14  Score=129.88  Aligned_cols=98  Identities=22%  Similarity=0.233  Sum_probs=82.0

Q ss_pred             ccccccceecccCceeEEEEE-cCCCcEEEEEEeccCC---hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCc----ee
Q 013018          346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSS---GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGE----EK  417 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~----~~  417 (451)
                      ++|...+.||+|+||.||++. ..+|+.||||.++...   .+..+.|.+|+.+|++++||||+++++++...+    ..
T Consensus         7 drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~~   86 (277)
T d1o6ya_           7 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP   86 (277)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEEE
T ss_pred             ceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCceE
Confidence            568889999999999999999 5689999999997542   233467999999999999999999999987643    37


Q ss_pred             eEEEeccCCCCHHHHHhccCCCCCCchhh
Q 013018          418 ILVYEFVPNKSLDYFLYAQSPKNNNNWIG  446 (451)
Q Consensus       418 ~lv~ey~~~GsL~~~L~~~~~~~~l~W~~  446 (451)
                      +|||||+++|+|.+++...+.   ++|.+
T Consensus        87 ~lvmE~~~g~~L~~~~~~~~~---l~~~~  112 (277)
T d1o6ya_          87 YIVMEYVDGVTLRDIVHTEGP---MTPKR  112 (277)
T ss_dssp             EEEEECCCEEEHHHHHHHHCS---CCHHH
T ss_pred             EEEEECCCCCEehhhhcccCC---CCHHH
Confidence            899999999999999987543   55554

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.44  E-value=9.5e-14  Score=132.70  Aligned_cols=94  Identities=21%  Similarity=0.225  Sum_probs=82.8

Q ss_pred             hccccccceecccCceeEEEEE-cCCCcEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEE
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRS---SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILV  420 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv  420 (451)
                      .++|...++||+|+||.||++. ..+|+.||||++...   .....+.+.+|+.+|++++||||+++++++...+.+++|
T Consensus         4 l~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv   83 (337)
T d1o6la_           4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV   83 (337)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hHhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccccccccc
Confidence            3578889999999999999999 568999999999753   223457789999999999999999999999999999999


Q ss_pred             EeccCCCCHHHHHhccCC
Q 013018          421 YEFVPNKSLDYFLYAQSP  438 (451)
Q Consensus       421 ~ey~~~GsL~~~L~~~~~  438 (451)
                      |||+++|+|.++++..+.
T Consensus        84 ~ey~~gg~L~~~~~~~~~  101 (337)
T d1o6la_          84 MEYANGGELFFHLSRERV  101 (337)
T ss_dssp             EECCTTCBHHHHHHHHSC
T ss_pred             eeccCCCchhhhhhcccC
Confidence            999999999999997553

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.43  E-value=1.1e-13  Score=131.28  Aligned_cols=93  Identities=18%  Similarity=0.315  Sum_probs=81.7

Q ss_pred             ccccccceecccCceeEEEEE-cCCCcEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEE
Q 013018          346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRS---SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  421 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~  421 (451)
                      ++|...++||+|+||.||++. ..+|+.||||++...   .....+.+.+|+.+|++++|||||++++++...+..++||
T Consensus         4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivm   83 (316)
T d1fota_           4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM   83 (316)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             hHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeEe
Confidence            468889999999999999999 467999999999643   2234578999999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhccCC
Q 013018          422 EFVPNKSLDYFLYAQSP  438 (451)
Q Consensus       422 ey~~~GsL~~~L~~~~~  438 (451)
                      ||+++|+|.+++.....
T Consensus        84 E~~~gg~l~~~~~~~~~  100 (316)
T d1fota_          84 DYIEGGELFSLLRKSQR  100 (316)
T ss_dssp             CCCCSCBHHHHHHHTSS
T ss_pred             eecCCcccccccccccc
Confidence            99999999999987543

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.42  E-value=5.3e-14  Score=132.46  Aligned_cols=96  Identities=24%  Similarity=0.446  Sum_probs=76.6

Q ss_pred             HHhhccccccceecccCceeEEEEEcC--------CCcEEEEEEeccCC-hhhHHHHHHHHHHHhcC-CCCCcccceeEE
Q 013018          342 EVATNNFSTDNKLGEGGFGEVYKGVLP--------SGQEIAVKRLSRSS-GQGGQEFKNEVVLVAKL-QHRNLVRLLGFC  411 (451)
Q Consensus       342 ~~~~~~~~~~~~lG~G~fg~V~~~~l~--------~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~g~~  411 (451)
                      +++.++|...+.||+|+||.||++...        .+..||||+++... .+...++.+|...+.++ +|||||+++|++
T Consensus         9 ~i~~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~   88 (299)
T d1fgka_           9 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGAC   88 (299)
T ss_dssp             BCCGGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             cccHHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEeccccc
Confidence            345677888999999999999999842        23479999997654 34457899999999888 899999999999


Q ss_pred             EeCceeeEEEeccCCCCHHHHHhccC
Q 013018          412 LEGEEKILVYEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       412 ~~~~~~~lv~ey~~~GsL~~~L~~~~  437 (451)
                      ..++..++||||+++|+|.++|+.++
T Consensus        89 ~~~~~~~~v~e~~~~g~l~~~i~~~~  114 (299)
T d1fgka_          89 TQDGPLYVIVEYASKGNLREYLQARR  114 (299)
T ss_dssp             CSSSSCEEEECCCTTCBHHHHHHTTS
T ss_pred             ccCCeEEEEEEccCCCcHHHHHHhhc
Confidence            99999999999999999999998754

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.42  E-value=1.3e-13  Score=130.85  Aligned_cols=93  Identities=20%  Similarity=0.303  Sum_probs=79.1

Q ss_pred             ccccccceecccCceeEEEEE-cCCCcEEEEEEeccCC---hhhHHHHHHHHHHHh-cCCCCCcccceeEEEeCceeeEE
Q 013018          346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSS---GQGGQEFKNEVVLVA-KLQHRNLVRLLGFCLEGEEKILV  420 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~-~l~h~niv~l~g~~~~~~~~~lv  420 (451)
                      ++|...++||+|+||.||++. ..+++.||||++....   ....+.+.+|..++. .++||||+++++++..++..+||
T Consensus         2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yiv   81 (320)
T d1xjda_           2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV   81 (320)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred             CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEE
Confidence            568889999999999999999 4578999999996432   233466778877765 68999999999999999999999


Q ss_pred             EeccCCCCHHHHHhccCC
Q 013018          421 YEFVPNKSLDYFLYAQSP  438 (451)
Q Consensus       421 ~ey~~~GsL~~~L~~~~~  438 (451)
                      |||+++|+|.++|+....
T Consensus        82 mEy~~~g~L~~~i~~~~~   99 (320)
T d1xjda_          82 MEYLNGGDLMYHIQSCHK   99 (320)
T ss_dssp             EECCTTCBHHHHHHHHSS
T ss_pred             EeecCCCcHHHHhhccCC
Confidence            999999999999987543

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.40  E-value=2e-13  Score=129.55  Aligned_cols=100  Identities=29%  Similarity=0.510  Sum_probs=78.8

Q ss_pred             ccccccceecccCceeEEEEEc-CCCc----EEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeE
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVL-PSGQ----EIAVKRLSRS-SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKIL  419 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l-~~g~----~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l  419 (451)
                      ++|+..++||+|+||.||+|.. .+|+    .||||.+... ..+..++|.+|+.+|++++|||||+++|++.. +..++
T Consensus         9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~-~~~~~   87 (317)
T d1xkka_           9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT-STVQL   87 (317)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEE
T ss_pred             HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCeeE
Confidence            3578889999999999999984 3444    6899998654 34456789999999999999999999999976 45678


Q ss_pred             EEeccCCCCHHHHHhccCCCCCCchhhhh
Q 013018          420 VYEFVPNKSLDYFLYAQSPKNNNNWIGQD  448 (451)
Q Consensus       420 v~ey~~~GsL~~~L~~~~~~~~l~W~~r~  448 (451)
                      ++||+.+|+|.+++..+.  ..++|..++
T Consensus        88 v~e~~~~~~l~~~~~~~~--~~~~~~~~~  114 (317)
T d1xkka_          88 ITQLMPFGCLLDYVREHK--DNIGSQYLL  114 (317)
T ss_dssp             EEECCTTCBHHHHHHHTS--SSCCHHHHH
T ss_pred             EEEeccCCcccccccccc--cCCCHHHHH
Confidence            899999999999988643  346776554

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.40  E-value=7.1e-14  Score=129.77  Aligned_cols=100  Identities=32%  Similarity=0.385  Sum_probs=73.6

Q ss_pred             ccccccceecccCceeEEEEEcC--CC--cEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceee
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVLP--SG--QEIAVKRLSRS---SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKI  418 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l~--~g--~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~  418 (451)
                      ++|+..+.||+|+||.||+|.+.  ++  ..||||++...   ..+..++|.+|+.+|++++||||++++|++.. +..+
T Consensus         8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~-~~~~   86 (273)
T d1u46a_           8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT-PPMK   86 (273)
T ss_dssp             GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCE
T ss_pred             HHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-cchh
Confidence            45788899999999999999852  23  37899998654   23345789999999999999999999999965 5678


Q ss_pred             EEEeccCCCCHHHHHhccCCCCCCchhhhh
Q 013018          419 LVYEFVPNKSLDYFLYAQSPKNNNNWIGQD  448 (451)
Q Consensus       419 lv~ey~~~GsL~~~L~~~~~~~~l~W~~r~  448 (451)
                      +|+||+++|+|.+++..+..  .++|..++
T Consensus        87 lv~e~~~~~~l~~~~~~~~~--~l~~~~~~  114 (273)
T d1u46a_          87 MVTELAPLGSLLDRLRKHQG--HFLLGTLS  114 (273)
T ss_dssp             EEEECCTTCBHHHHHHHHGG--GSCHHHHH
T ss_pred             eeeeeecCcchhhhhhcccC--CCCHHHHH
Confidence            99999999999998886432  36665543

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.37  E-value=3.5e-13  Score=126.64  Aligned_cols=99  Identities=28%  Similarity=0.428  Sum_probs=78.6

Q ss_pred             ccccccceecccCceeEEEEE-cCCCcEEEEEEeccCC--hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEe
Q 013018          346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSS--GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  422 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  422 (451)
                      ++|+..++||+|+||.||+|. ..+|+.||||++....  ....+.+.+|+.+|++++|||||++++++...+..+||||
T Consensus         2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e   81 (298)
T d1gz8a_           2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE   81 (298)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEEe
Confidence            578889999999999999999 5679999999996542  2234789999999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhccCCCCCCchhh
Q 013018          423 FVPNKSLDYFLYAQSPKNNNNWIG  446 (451)
Q Consensus       423 y~~~GsL~~~L~~~~~~~~l~W~~  446 (451)
                      |+.+ ++.+++.... ...++|..
T Consensus        82 ~~~~-~~~~~~~~~~-~~~l~e~~  103 (298)
T d1gz8a_          82 FLHQ-DLKKFMDASA-LTGIPLPL  103 (298)
T ss_dssp             CCSE-EHHHHHHHTT-TTCCCHHH
T ss_pred             ecCC-chhhhhhhhc-ccCCCHHH
Confidence            9965 5555555432 23355544

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.36  E-value=3.6e-13  Score=126.59  Aligned_cols=101  Identities=24%  Similarity=0.411  Sum_probs=80.6

Q ss_pred             ChHHHHHhhccccccceecccCceeEEEEEcC------CCcEEEEEEeccCC-hhhHHHHHHHHHHHhcC-CCCCcccce
Q 013018          337 DFETIEVATNNFSTDNKLGEGGFGEVYKGVLP------SGQEIAVKRLSRSS-GQGGQEFKNEVVLVAKL-QHRNLVRLL  408 (451)
Q Consensus       337 ~~~~l~~~~~~~~~~~~lG~G~fg~V~~~~l~------~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~  408 (451)
                      +...+++..++|+..++||+|+||.||+|...      .++.||||+++... ....+.+.+|...+.++ +|+||+.+.
T Consensus         4 ~~~~wei~~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~   83 (299)
T d1ywna1           4 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL   83 (299)
T ss_dssp             CHHHHBCCGGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             CCccccccHHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEee
Confidence            44566777788999999999999999999842      34689999997543 34456788888888877 799999999


Q ss_pred             eEEEeC-ceeeEEEeccCCCCHHHHHhccC
Q 013018          409 GFCLEG-EEKILVYEFVPNKSLDYFLYAQS  437 (451)
Q Consensus       409 g~~~~~-~~~~lv~ey~~~GsL~~~L~~~~  437 (451)
                      +++... ...++||||+++|+|.++|+..+
T Consensus        84 ~~~~~~~~~~~iv~E~~~~g~L~~~l~~~~  113 (299)
T d1ywna1          84 GACTKPGGPLMVIVEFCKFGNLSTYLRSKR  113 (299)
T ss_dssp             EEECSTTSCCEEEEECCTTCBHHHHHHHTG
T ss_pred             eeeccCCCeEEEEEEecCCCcHHHHHHhcc
Confidence            998764 46899999999999999998653

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.34  E-value=7.5e-13  Score=127.80  Aligned_cols=93  Identities=25%  Similarity=0.329  Sum_probs=76.8

Q ss_pred             ccccccceecccCceeEEEEE-cCCCcEEEEEEeccCC---hhhHHHHH---HHHHHHhcCCCCCcccceeEEEeCceee
Q 013018          346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSS---GQGGQEFK---NEVVLVAKLQHRNLVRLLGFCLEGEEKI  418 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~---~~~~~~~~---~E~~~l~~l~h~niv~l~g~~~~~~~~~  418 (451)
                      ++|...++||+|+||.||++. ..+|+.||||++....   .+....+.   +|+.+++.++|||||++++++...+..+
T Consensus         4 ddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~~   83 (364)
T d1omwa3           4 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS   83 (364)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred             HhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEEE
Confidence            578889999999999999999 5579999999986431   12223344   4477788889999999999999999999


Q ss_pred             EEEeccCCCCHHHHHhccCC
Q 013018          419 LVYEFVPNKSLDYFLYAQSP  438 (451)
Q Consensus       419 lv~ey~~~GsL~~~L~~~~~  438 (451)
                      |||||+++|+|.++|.....
T Consensus        84 ivmE~~~gg~L~~~l~~~~~  103 (364)
T d1omwa3          84 FILDLMNGGDLHYHLSQHGV  103 (364)
T ss_dssp             EEECCCCSCBHHHHHHHHCS
T ss_pred             EEEEecCCCcHHHHHHhccc
Confidence            99999999999999987543

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.34  E-value=9.4e-13  Score=126.42  Aligned_cols=92  Identities=23%  Similarity=0.239  Sum_probs=81.0

Q ss_pred             ccccccceecccCceeEEEEE-cCCCcEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEE
Q 013018          346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRS---SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  421 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~  421 (451)
                      ++|+..++||+|+||.||++. ..+|+.||||++...   .....+.+.+|+.+|++++||||+++++++......++|+
T Consensus        41 d~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v~  120 (350)
T d1rdqe_          41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM  120 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeeccccccccccccccc
Confidence            468889999999999999998 457999999998643   1233567999999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhccC
Q 013018          422 EFVPNKSLDYFLYAQS  437 (451)
Q Consensus       422 ey~~~GsL~~~L~~~~  437 (451)
                      ||+.+|+|.++|....
T Consensus       121 e~~~~g~l~~~l~~~~  136 (350)
T d1rdqe_         121 EYVAGGEMFSHLRRIG  136 (350)
T ss_dssp             ECCTTCBHHHHHHHHC
T ss_pred             ccccccchhhhHhhcC
Confidence            9999999999998754

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.34  E-value=8.4e-13  Score=123.21  Aligned_cols=91  Identities=22%  Similarity=0.372  Sum_probs=78.7

Q ss_pred             ccccccceecccCceeEEEEEcCCCcEEEEEEeccCCh--hhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEec
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSG--QGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  423 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey  423 (451)
                      ++|...++||+|+||.||+|..++|+.||||++.....  ...+.+.+|+.+|++++||||+++++.+...+..++++||
T Consensus         2 ~~Y~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e~   81 (286)
T d1ob3a_           2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH   81 (286)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             CCceeccEEecCCCcEEEEEEeCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEEe
Confidence            57888999999999999999988899999999975432  2247899999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcc
Q 013018          424 VPNKSLDYFLYAQ  436 (451)
Q Consensus       424 ~~~GsL~~~L~~~  436 (451)
                      +.++.+..+.+..
T Consensus        82 ~~~~~~~~~~~~~   94 (286)
T d1ob3a_          82 LDQDLKKLLDVCE   94 (286)
T ss_dssp             CSEEHHHHHHTST
T ss_pred             ehhhhHHHHHhhc
Confidence            9877666665543

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.30  E-value=1.9e-12  Score=123.59  Aligned_cols=94  Identities=18%  Similarity=0.185  Sum_probs=75.1

Q ss_pred             ccccccc-eecccCceeEEEEE-cCCCcEEEEEEeccCChhhHHHHHHHHHHHhcC-CCCCcccceeEEEe----Cceee
Q 013018          346 NNFSTDN-KLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKL-QHRNLVRLLGFCLE----GEEKI  418 (451)
Q Consensus       346 ~~~~~~~-~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~----~~~~~  418 (451)
                      ++|.... .||+|+||.||++. ..+++.||||+++..     ..+.+|+.++.++ +|||||++++++..    ...++
T Consensus        11 ~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~-----~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~~   85 (335)
T d2ozaa1          11 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL   85 (335)
T ss_dssp             GTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred             cCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECCc-----HHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEEE
Confidence            4576654 69999999999998 567999999999643     4577899887654 89999999998764    35689


Q ss_pred             EEEeccCCCCHHHHHhccCCCCCCchh
Q 013018          419 LVYEFVPNKSLDYFLYAQSPKNNNNWI  445 (451)
Q Consensus       419 lv~ey~~~GsL~~~L~~~~~~~~l~W~  445 (451)
                      |||||+++|+|.++|+.+.. ..+++.
T Consensus        86 ivmEy~~gg~L~~~i~~~~~-~~l~e~  111 (335)
T d2ozaa1          86 IVMECLDGGELFSRIQDRGD-QAFTER  111 (335)
T ss_dssp             EEEECCCSEEHHHHHHSCSC-CCEEHH
T ss_pred             EEEECCCCCcHHHHHHhcCC-CCcCHH
Confidence            99999999999999986432 335543

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.30  E-value=1.2e-12  Score=122.88  Aligned_cols=85  Identities=25%  Similarity=0.330  Sum_probs=69.4

Q ss_pred             cceecccCceeEEEEE-cCCCcEEEEEEeccCChhh-----HHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEecc
Q 013018          351 DNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQG-----GQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFV  424 (451)
Q Consensus       351 ~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~~~-----~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ey~  424 (451)
                      .++||+|+||.||++. ..+|+.||||+++......     .+.+.+|+.+|++++|||||++++++...+..+|||||+
T Consensus         3 l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~~   82 (299)
T d1ua2a_           3 LDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM   82 (299)
T ss_dssp             EEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECC
T ss_pred             ceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhhh
Confidence            5789999999999999 4578999999996542211     246899999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhc
Q 013018          425 PNKSLDYFLYA  435 (451)
Q Consensus       425 ~~GsL~~~L~~  435 (451)
                      +++++..++..
T Consensus        83 ~~~~~~~~~~~   93 (299)
T d1ua2a_          83 ETDLEVIIKDN   93 (299)
T ss_dssp             SEEHHHHHTTC
T ss_pred             cchHHhhhhhc
Confidence            88877666553

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.30  E-value=3e-12  Score=119.60  Aligned_cols=92  Identities=26%  Similarity=0.438  Sum_probs=80.8

Q ss_pred             ccccccceecccCceeEEEEE-cCCCcEEEEEEeccCC--hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCceeeEEEe
Q 013018          346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSS--GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  422 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  422 (451)
                      ++|+..++||+|+||.||+++ ..+++.||||+++...  ......+.+|+.+|++++||||+++.+++......++++|
T Consensus         2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~   81 (292)
T d1unla_           2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEee
Confidence            468889999999999999999 5688999999996442  2345789999999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhccC
Q 013018          423 FVPNKSLDYFLYAQS  437 (451)
Q Consensus       423 y~~~GsL~~~L~~~~  437 (451)
                      ++.+++|..+++..+
T Consensus        82 ~~~~~~l~~~~~~~~   96 (292)
T d1unla_          82 FCDQDLKKYFDSCNG   96 (292)
T ss_dssp             CCSEEHHHHHHHTTT
T ss_pred             ecccccccccccccc
Confidence            999999988887644

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.20  E-value=8.8e-12  Score=119.47  Aligned_cols=92  Identities=22%  Similarity=0.369  Sum_probs=76.5

Q ss_pred             hccccccceecccCceeEEEEE-cCCCcEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeC-----ce
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRS--SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEG-----EE  416 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-----~~  416 (451)
                      .++|+..++||+|+||.||++. ..+|+.||||++...  .....+.+.+|+.+|++++|||+|++++++...     ..
T Consensus        17 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~   96 (348)
T d2gfsa1          17 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN   96 (348)
T ss_dssp             ETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCC
T ss_pred             CCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCc
Confidence            3568889999999999999999 568999999999754  233446789999999999999999999988643     23


Q ss_pred             eeEEEeccCCCCHHHHHhcc
Q 013018          417 KILVYEFVPNKSLDYFLYAQ  436 (451)
Q Consensus       417 ~~lv~ey~~~GsL~~~L~~~  436 (451)
                      .++++||+.+|+|.++++.+
T Consensus        97 ~~~i~~~~~gg~L~~~~~~~  116 (348)
T d2gfsa1          97 DVYLVTHLMGADLNNIVKCQ  116 (348)
T ss_dssp             CCEEEEECCSEEHHHHHTTC
T ss_pred             eEEEEEeecCCchhhhcccc
Confidence            46777888999999999753

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.20  E-value=7.4e-12  Score=120.17  Aligned_cols=96  Identities=26%  Similarity=0.367  Sum_probs=73.0

Q ss_pred             cccccceecccCceeEEEEE-cCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeEEEeC------ceeeE
Q 013018          347 NFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEG------EEKIL  419 (451)
Q Consensus       347 ~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~------~~~~l  419 (451)
                      .|+..++||+|+||+||+++ ..+|+.||||++.....    ...+|+.+|++++||||+++++++...      ..++|
T Consensus        21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~----~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~l   96 (350)
T d1q5ka_          21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL   96 (350)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS----SCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEE
T ss_pred             CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccch----HHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEE
Confidence            46778899999999999999 45799999999975432    234799999999999999999998643      24789


Q ss_pred             EEeccCCCCHHHHHhccCCCCCCchhh
Q 013018          420 VYEFVPNKSLDYFLYAQSPKNNNNWIG  446 (451)
Q Consensus       420 v~ey~~~GsL~~~L~~~~~~~~l~W~~  446 (451)
                      ||||+++|.+..+++.......++|.+
T Consensus        97 v~Ey~~~~~~~~l~~~~~~~~~l~~~~  123 (350)
T d1q5ka_          97 VLDYVPETVYRVARHYSRAKQTLPVIY  123 (350)
T ss_dssp             EEECCSEEHHHHHHHHHHTTCCCCHHH
T ss_pred             EEeccCCccHHHHHhhhhccCCCCHHH
Confidence            999998765444443333444566643

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.18  E-value=1.4e-11  Score=117.95  Aligned_cols=91  Identities=16%  Similarity=0.268  Sum_probs=72.2

Q ss_pred             ccccccceecccCceeEEEEE-cCCCcEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCcccceeEEEeCc----eeeE
Q 013018          346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSS-GQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGE----EKIL  419 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~----~~~l  419 (451)
                      ++|...++||+|+||+||+|. ..+|+.||||++.... ....+.+.+|+.+|++++||||+++++++....    ..++
T Consensus         8 ~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~~   87 (345)
T d1pmea_           8 PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY   87 (345)
T ss_dssp             TTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEE
T ss_pred             CCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceEE
Confidence            468889999999999999998 5689999999997543 334578999999999999999999999987543    2345


Q ss_pred             EEeccCCCCHHHHHhcc
Q 013018          420 VYEFVPNKSLDYFLYAQ  436 (451)
Q Consensus       420 v~ey~~~GsL~~~L~~~  436 (451)
                      ++||+.+|+|.+++..+
T Consensus        88 l~~~~~~g~L~~~l~~~  104 (345)
T d1pmea_          88 LVTHLMGADLYKLLKTQ  104 (345)
T ss_dssp             EEEECCCEEHHHHHHHC
T ss_pred             EEEeecCCchhhhhhcC
Confidence            55667799999999764

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.18  E-value=1.3e-11  Score=118.17  Aligned_cols=90  Identities=24%  Similarity=0.397  Sum_probs=69.5

Q ss_pred             hccccccceecccCceeEEEEE-cCCCcEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeCc------
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRS--SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGE------  415 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~------  415 (451)
                      .++|+..++||+|+||.||++. ..+|+.||||++...  .....+.+.+|+.+|++++|||||++++++...+      
T Consensus        17 ~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~   96 (346)
T d1cm8a_          17 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT   96 (346)
T ss_dssp             BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred             CCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccc
Confidence            3568889999999999999999 567999999999753  3334567999999999999999999999987654      


Q ss_pred             eeeEEEeccCCCCHHHHHhc
Q 013018          416 EKILVYEFVPNKSLDYFLYA  435 (451)
Q Consensus       416 ~~~lv~ey~~~GsL~~~L~~  435 (451)
                      ..+|||||+ +++|..+++.
T Consensus        97 ~~~lv~e~~-~~~l~~~~~~  115 (346)
T d1cm8a_          97 DFYLVMPFM-GTDLGKLMKH  115 (346)
T ss_dssp             CCEEEEECC-SEEHHHHHHH
T ss_pred             eEEEEEecc-cccHHHHHHh
Confidence            569999999 5678887764

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.17  E-value=1.4e-11  Score=117.12  Aligned_cols=86  Identities=22%  Similarity=0.465  Sum_probs=73.7

Q ss_pred             ccccccceecccCceeEEEEE-cCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCC-CCCcccceeEEEeC--ceeeEEE
Q 013018          346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQ-HRNLVRLLGFCLEG--EEKILVY  421 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~--~~~~lv~  421 (451)
                      ++|+..++||+|+||+||+|+ ..+|+.||||+++...   .+.+.+|+.+|.+++ ||||+++++++...  ...++||
T Consensus        35 d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~~---~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~  111 (328)
T d3bqca1          35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF  111 (328)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSSC---HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEEE
T ss_pred             cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHHH---HHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEEE
Confidence            578899999999999999999 5679999999997542   467899999999995 99999999998753  4688999


Q ss_pred             eccCCCCHHHHHh
Q 013018          422 EFVPNKSLDYFLY  434 (451)
Q Consensus       422 ey~~~GsL~~~L~  434 (451)
                      ||+++|+|..+.+
T Consensus       112 e~~~~~~L~~~~~  124 (328)
T d3bqca1         112 EHVNNTDFKQLYQ  124 (328)
T ss_dssp             ECCCSCBGGGTTT
T ss_pred             eecCCCcHHHHhc
Confidence            9999999877643

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.17  E-value=1.6e-11  Score=117.98  Aligned_cols=88  Identities=23%  Similarity=0.366  Sum_probs=70.6

Q ss_pred             ccccccceecccCceeEEEEE-cCCCcEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCcccceeEEEeC------ce
Q 013018          346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRS--SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEG------EE  416 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~------~~  416 (451)
                      ++|+..++||+|+||+||+|. ..+|+.||||++...  .......+.+|+.++++++||||+++++++...      ..
T Consensus        17 ~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~   96 (355)
T d2b1pa1          17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQD   96 (355)
T ss_dssp             TTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCE
T ss_pred             CCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCce
Confidence            468889999999999999999 557999999999754  233446799999999999999999999998643      57


Q ss_pred             eeEEEeccCCCCHHHHHh
Q 013018          417 KILVYEFVPNKSLDYFLY  434 (451)
Q Consensus       417 ~~lv~ey~~~GsL~~~L~  434 (451)
                      .++||||+.++ |.+.++
T Consensus        97 ~~iv~Ey~~~~-l~~~~~  113 (355)
T d2b1pa1          97 VYLVMELMDAN-LCQVIQ  113 (355)
T ss_dssp             EEEEEECCSEE-HHHHHT
T ss_pred             eEEEEeccchH-HHHhhh
Confidence            89999999654 555554

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.16  E-value=5.8e-12  Score=119.45  Aligned_cols=93  Identities=19%  Similarity=0.278  Sum_probs=79.1

Q ss_pred             ccccccceecccCceeEEEEEc----CCCcEEEEEEeccCC----hhhHHHHHHHHHHHhcCCC-CCcccceeEEEeCce
Q 013018          346 NNFSTDNKLGEGGFGEVYKGVL----PSGQEIAVKRLSRSS----GQGGQEFKNEVVLVAKLQH-RNLVRLLGFCLEGEE  416 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~l----~~g~~vavK~l~~~~----~~~~~~~~~E~~~l~~l~h-~niv~l~g~~~~~~~  416 (451)
                      ++|+..++||+|+||.||++..    .+|+.||||.++...    ....+.+.+|+.+|.+++| |||+++.++......
T Consensus        24 ~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~  103 (322)
T d1vzoa_          24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK  103 (322)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred             hceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCCc
Confidence            5688899999999999999983    247899999986431    2234678899999999965 899999999999999


Q ss_pred             eeEEEeccCCCCHHHHHhccCC
Q 013018          417 KILVYEFVPNKSLDYFLYAQSP  438 (451)
Q Consensus       417 ~~lv~ey~~~GsL~~~L~~~~~  438 (451)
                      .++++||+.+|+|.+++...+.
T Consensus       104 ~~~v~e~~~~~~L~~~i~~~~~  125 (322)
T d1vzoa_         104 LHLILDYINGGELFTHLSQRER  125 (322)
T ss_dssp             EEEEECCCCSCBHHHHHHHHSC
T ss_pred             eeeeeecccccHHHHHHHhccc
Confidence            9999999999999999987654

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.15  E-value=6.4e-12  Score=116.30  Aligned_cols=92  Identities=26%  Similarity=0.487  Sum_probs=76.3

Q ss_pred             ccccccceecccCceeEEEEE-cCCCcEEEEEEeccCCh------hhHHHHHHHHHHHhcCC--CCCcccceeEEEeCce
Q 013018          346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSG------QGGQEFKNEVVLVAKLQ--HRNLVRLLGFCLEGEE  416 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~------~~~~~~~~E~~~l~~l~--h~niv~l~g~~~~~~~  416 (451)
                      ++|...++||+|+||.||+|. ..+|+.||||++.....      .....+.+|+.+|++++  |||||++++++...+.
T Consensus         4 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~   83 (273)
T d1xwsa_           4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS   83 (273)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSE
T ss_pred             CeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCCe
Confidence            468888999999999999999 56799999999864311      11234778999999986  8999999999999999


Q ss_pred             eeEEEeccCC-CCHHHHHhccC
Q 013018          417 KILVYEFVPN-KSLDYFLYAQS  437 (451)
Q Consensus       417 ~~lv~ey~~~-GsL~~~L~~~~  437 (451)
                      .++||||+.+ +++.+++..+.
T Consensus        84 ~~lv~e~~~~~~~l~~~~~~~~  105 (273)
T d1xwsa_          84 FVLILERPEPVQDLFDFITERG  105 (273)
T ss_dssp             EEEEEECCSSEEEHHHHHHHHC
T ss_pred             EEEEEEeccCcchHHHHHhccC
Confidence            9999999975 68888887643

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.14  E-value=2.6e-11  Score=114.66  Aligned_cols=91  Identities=24%  Similarity=0.422  Sum_probs=72.0

Q ss_pred             hccccccceecccCceeEEEEE-cCCCcEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCcccceeEEEe--------
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRS--SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLE--------  413 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~--------  413 (451)
                      .++|+..++||+|+||+||+|. ..+|+.||||++...  .......+.+|+.+|++++|||++++++.+..        
T Consensus         9 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~   88 (318)
T d3blha1           9 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC   88 (318)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC--------
T ss_pred             cCCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeeccccccccc
Confidence            3678899999999999999999 568999999998643  22234678999999999999999999998865        


Q ss_pred             CceeeEEEeccCCCCHHHHHhc
Q 013018          414 GEEKILVYEFVPNKSLDYFLYA  435 (451)
Q Consensus       414 ~~~~~lv~ey~~~GsL~~~L~~  435 (451)
                      ....++|+||++++.+..+...
T Consensus        89 ~~~~~iv~e~~~~~~~~~~~~~  110 (318)
T d3blha1          89 KGSIYLVFDFCEHDLAGLLSNV  110 (318)
T ss_dssp             --CEEEEEECCCEEHHHHHTCT
T ss_pred             CceEEEEEeccCCCccchhhhc
Confidence            2357899999988766655443

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.05  E-value=1.4e-10  Score=108.24  Aligned_cols=89  Identities=25%  Similarity=0.435  Sum_probs=75.3

Q ss_pred             ccccccceecccCceeEEEEE-cCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCC-CCcccceeEEEeCceeeEEEec
Q 013018          346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH-RNLVRLLGFCLEGEEKILVYEF  423 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~g~~~~~~~~~lv~ey  423 (451)
                      ++|+..++||+|+||.||+|. ..+|+.||||.+.....  ...+.+|++.+..++| +|++.+.++.......++||||
T Consensus         5 ~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme~   82 (293)
T d1csna_           5 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD--APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDL   82 (293)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT--SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEEC
T ss_pred             CceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEccccC--cHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEEe
Confidence            468889999999999999999 55789999998865432  2457788899999865 8999999999999999999999


Q ss_pred             cCCCCHHHHHhccC
Q 013018          424 VPNKSLDYFLYAQS  437 (451)
Q Consensus       424 ~~~GsL~~~L~~~~  437 (451)
                      + +|+|.++++...
T Consensus        83 ~-~~~l~~~~~~~~   95 (293)
T d1csna_          83 L-GPSLEDLLDLCG   95 (293)
T ss_dssp             C-CCBHHHHHHHTT
T ss_pred             c-CCCHHHHHHhhc
Confidence            8 689999988644

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.05  E-value=5.7e-11  Score=111.47  Aligned_cols=91  Identities=27%  Similarity=0.467  Sum_probs=68.7

Q ss_pred             hccccccceecccCceeEEEEEc-CC-CcEEEEEEeccCCh--hhHHHHHHHHHHHhcC---CCCCcccceeEEEe----
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGVL-PS-GQEIAVKRLSRSSG--QGGQEFKNEVVLVAKL---QHRNLVRLLGFCLE----  413 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~l-~~-g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l---~h~niv~l~g~~~~----  413 (451)
                      .++|+..++||+|+||.||++.. .+ ++.||||++.....  .....+.+|+.+|+.+   +||||+++++++..    
T Consensus         6 ~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~   85 (305)
T d1blxa_           6 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD   85 (305)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECS
T ss_pred             cCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccccc
Confidence            46788999999999999999983 44 67799999864321  1223566777776655   89999999999863    


Q ss_pred             -CceeeEEEeccCCCCHHHHHhc
Q 013018          414 -GEEKILVYEFVPNKSLDYFLYA  435 (451)
Q Consensus       414 -~~~~~lv~ey~~~GsL~~~L~~  435 (451)
                       ....++++||+++|++......
T Consensus        86 ~~~~~~~~~e~~~~~~~~~~~~~  108 (305)
T d1blxa_          86 RETKLTLVFEHVDQDLTTYLDKV  108 (305)
T ss_dssp             SEEEEEEEEECCSCBHHHHHHHS
T ss_pred             cCceEEEEEEeccCCchhhhhhc
Confidence             2367899999988877655554

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.01  E-value=2.7e-10  Score=106.53  Aligned_cols=89  Identities=24%  Similarity=0.431  Sum_probs=69.8

Q ss_pred             ccccccceecccCceeEEEEE-cCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcccceeE-EEeCceeeEEEec
Q 013018          346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGF-CLEGEEKILVYEF  423 (451)
Q Consensus       346 ~~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~-~~~~~~~~lv~ey  423 (451)
                      ++|+..+.||+|+||.||+|. ..+|+.||||.+.....  .+++..|++++++++|+|++..++. ....+..++||||
T Consensus         7 ~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~   84 (299)
T d1ckia_           7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMEL   84 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTT--SCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred             CEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhcc--CHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEEE
Confidence            458889999999999999998 56789999999875432  2468899999999988776666554 4567788899999


Q ss_pred             cCCCCHHHHHhccC
Q 013018          424 VPNKSLDYFLYAQS  437 (451)
Q Consensus       424 ~~~GsL~~~L~~~~  437 (451)
                      + +|+|.+.+....
T Consensus        85 ~-~~~l~~~~~~~~   97 (299)
T d1ckia_          85 L-GPSLEDLFNFCS   97 (299)
T ss_dssp             C-CCBHHHHHHHTT
T ss_pred             c-CCchhhhhhhcc
Confidence            8 557777666533

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.38  E-value=2.7e-07  Score=87.75  Aligned_cols=81  Identities=17%  Similarity=0.246  Sum_probs=62.0

Q ss_pred             cccccceecccCceeEEEEE-cCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCC-----------CCCcccceeEEEe-
Q 013018          347 NFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQ-----------HRNLVRLLGFCLE-  413 (451)
Q Consensus       347 ~~~~~~~lG~G~fg~V~~~~-l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-----------h~niv~l~g~~~~-  413 (451)
                      +|+..++||+|+||.||+|+ ..+|+.||||+++... ...+.+.+|+.++++++           |+||+++++++.. 
T Consensus        14 rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~-~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~   92 (362)
T d1q8ya_          14 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHK   92 (362)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEE
T ss_pred             cEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccc-cchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeec
Confidence            47889999999999999999 5689999999997543 23467788888888765           5789999988764 


Q ss_pred             -CceeeEEEeccCCCC
Q 013018          414 -GEEKILVYEFVPNKS  428 (451)
Q Consensus       414 -~~~~~lv~ey~~~Gs  428 (451)
                       ....+++++++..+.
T Consensus        93 ~~~~~~~~~~~~~~~~  108 (362)
T d1q8ya_          93 GPNGVHVVMVFEVLGE  108 (362)
T ss_dssp             ETTEEEEEEEECCCCE
T ss_pred             cccceeeeeeeccccc
Confidence             345566666665544

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.23  E-value=6.7e-07  Score=76.99  Aligned_cols=77  Identities=19%  Similarity=0.179  Sum_probs=57.7

Q ss_pred             ccceecccCceeEEEEEcCCCcEEEEEEeccCCh------------------hhHHHHHHHHHHHhcCCCCCcccceeEE
Q 013018          350 TDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSG------------------QGGQEFKNEVVLVAKLQHRNLVRLLGFC  411 (451)
Q Consensus       350 ~~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~~------------------~~~~~~~~E~~~l~~l~h~niv~l~g~~  411 (451)
                      ..++||+|+||.||+|...+|+.||||.++....                  .......+|...+.+++|.+++..++..
T Consensus         4 vg~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~~~   83 (191)
T d1zara2           4 IGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAWE   83 (191)
T ss_dssp             EEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEEEE
T ss_pred             hCCEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEEec
Confidence            4689999999999999987899999998753210                  0113456788899999999998876543


Q ss_pred             EeCceeeEEEeccCCCCHH
Q 013018          412 LEGEEKILVYEFVPNKSLD  430 (451)
Q Consensus       412 ~~~~~~~lv~ey~~~GsL~  430 (451)
                          ..+|+|||++++.+.
T Consensus        84 ----~~~lvme~~~~~~~~   98 (191)
T d1zara2          84 ----GNAVLMELIDAKELY   98 (191)
T ss_dssp             ----TTEEEEECCCCEEGG
T ss_pred             ----CCEEEEEeecccccc
Confidence                237999999876543

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=89.31  E-value=0.43  Score=40.91  Aligned_cols=88  Identities=11%  Similarity=0.006  Sum_probs=56.6

Q ss_pred             hccccccceecccCceeEEEEEcCCCcEEEEEEeccCChhhHHHHHHHHHHHhcCC-CCCcccceeEEEeCceeeEEEec
Q 013018          345 TNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQ-HRNLVRLLGFCLEGEEKILVYEF  423 (451)
Q Consensus       345 ~~~~~~~~~lG~G~fg~V~~~~l~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~lv~ey  423 (451)
                      .+.+...+..+-++-..||+... ++..+.+|+...........+.+|...+..+. |--+.+++.....++..++|||+
T Consensus        13 ~~~~~~~~~~~G~s~~~v~rv~~-~~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~lv~~~   91 (263)
T d1j7la_          13 IEKYRCVKDTEGMSPAKVYKLVG-ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSE   91 (263)
T ss_dssp             HTTSEEEECSCCCSSSEEEEEEC-SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEEC
T ss_pred             hhceEEEEcCCCCCCCcEEEEEe-CCCeEEEEEcCCCcccchhhHHHHHHHHHHHhccCCCCcEEEEEecCCceEEEEEe
Confidence            33444444333334467998876 55567788776543333445677877776653 33355677777777888999999


Q ss_pred             cCCCCHHHHH
Q 013018          424 VPNKSLDYFL  433 (451)
Q Consensus       424 ~~~GsL~~~L  433 (451)
                      +++..+.+..
T Consensus        92 l~G~~~~~~~  101 (263)
T d1j7la_          92 ADGVLCSEEY  101 (263)
T ss_dssp             CSSEEHHHHT
T ss_pred             cccccccccc
Confidence            9988775543